BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010202
(515 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255547888|ref|XP_002515001.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546052|gb|EEF47555.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 466
Score = 680 bits (1755), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/462 (68%), Positives = 380/462 (82%)
Query: 54 HQVLCVDSPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDD 113
HQ +DS R DIDVI++K+ VGSS DE+ QSL D VCN+I SH LV+KL+ RFKDD
Sbjct: 5 HQEQFLDSKRQSDIDVIVAKIRVGSSHDEIVQSLVHDEVCNSIHLSHELVDKLLFRFKDD 64
Query: 114 WKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAK 173
WKSALG+FRWA S GY+HS E Y+ MVDI+GK++QMDQM LLEEM KG VTL T+ K
Sbjct: 65 WKSALGVFRWAESRAGYKHSPEAYDTMVDIMGKMKQMDQMEFLLEEMEKGQHVTLKTVGK 124
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCI 233
MRRF+GA QWE+ +R FD+LGTFGLEKNTE+MNLLLDTLCKE KVELAR +FL+LKS I
Sbjct: 125 AMRRFAGARQWENVLRVFDKLGTFGLEKNTESMNLLLDTLCKERKVELAREIFLDLKSHI 184
Query: 234 PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
PNA+TFNIFIHGWCK+NRV+EA WTIQEMKGHGC PCVISYSTI+Q YC + NFSKVYE
Sbjct: 185 SPNANTFNIFIHGWCKVNRVEEAYWTIQEMKGHGCTPCVISYSTIVQFYCHRSNFSKVYE 244
Query: 294 LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLG 353
LLDEM+AQG PNVVTYT+VMS LAKS ++EEA++I ++MK VG KPD+ F+N LI+TLG
Sbjct: 245 LLDEMEAQGLIPNVVTYTSVMSALAKSEEYEEALQIAQRMKSVGCKPDTLFYNSLIHTLG 304
Query: 354 RASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPN 413
+A R +EA+ V++VEMP GV P+TST+N+MI M HH KA ++L+E+ CKP+
Sbjct: 305 KAGRPEEAIQVFEVEMPNTGVPPNTSTYNSMIAMLCHHSQERKALNLLKEIEASIICKPD 364
Query: 414 VQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLL 473
VQT++PLLKSCFK G D LSQLLDDMV KHHLSLD + YTL++HGLCRANKCEWAY L
Sbjct: 365 VQTYYPLLKSCFKAGSIDSLLSQLLDDMVKKHHLSLDFSAYTLLVHGLCRANKCEWAYCL 424
Query: 474 FKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
F+EMIG D+TP+YQTCRL+LDEVK KHMYDAA+KIE VM+K+
Sbjct: 425 FEEMIGKDMTPKYQTCRLLLDEVKLKHMYDAAQKIEIVMQKI 466
>gi|449435037|ref|XP_004135302.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial-like [Cucumis sativus]
Length = 519
Score = 675 bits (1742), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/519 (61%), Positives = 406/519 (78%), Gaps = 4/519 (0%)
Query: 1 MICHLQKYLKQARIPLNPLTSRIRFHSSSENCSHIVSSS----PIESYCSDGARLDHHQV 56
M+ H+QK K L+ S FH SS+ CS +S + P+E S GAR +V
Sbjct: 1 MLLHIQKSSKGIWGVLDRCKSFAYFHVSSQRCSDALSPANILYPLEPNISVGARDLQQRV 60
Query: 57 LCVDSPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKS 116
+ DID II+KV VGSSEDEVFQSL QD VCN+IQ SH LV KL+ RFKDDWKS
Sbjct: 61 PSEFQKKKSDIDFIIAKVQVGSSEDEVFQSLLQDPVCNSIQLSHDLVYKLLQRFKDDWKS 120
Query: 117 ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMR 176
ALG+FRWA S G++H+ ++Y++++D LGK +Q+ +MR +LEEM + +VTL+T+AK MR
Sbjct: 121 ALGVFRWAESLSGFKHTPDLYDILIDTLGKTKQLVKMRGMLEEMKEARLVTLDTVAKAMR 180
Query: 177 RFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPN 236
RF+GAGQWE+AVR FD+L T+GLEKNTE+MN+LLDTLCKE KVE AR ++LELKS I PN
Sbjct: 181 RFAGAGQWENAVRIFDDLETYGLEKNTESMNVLLDTLCKEKKVEKARQMYLELKSHIAPN 240
Query: 237 AHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLD 296
A+TFN+FIHGWCK+N++DEA WT++EMKG+G PCVISYSTII YC + NF+KVYELLD
Sbjct: 241 ANTFNMFIHGWCKVNKIDEAHWTLEEMKGYGHRPCVISYSTIILFYCHRCNFNKVYELLD 300
Query: 297 EMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRAS 356
EM AQGCP NV+TYTT+M L KS +FEEA++I E+MK G +PD+ F+NCLI+TLGRA
Sbjct: 301 EMDAQGCPANVITYTTIMCSLTKSEEFEEALQIAERMKSAGYEPDTLFYNCLIHTLGRAG 360
Query: 357 RVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQT 416
+V+EA++V++VEMP V P+TST+N+MI M+ EKA +LEEM K EHCKP+VQT
Sbjct: 361 KVREAIHVFEVEMPSKSVLPNTSTYNSMIAMYCRRAREEKAMKLLEEMQKSEHCKPDVQT 420
Query: 417 FHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKE 476
++PLLKSCF+TGKTD LS LLD+M+NKHHLSLDI+TY+L+IHGLCRANKC+WAY LF++
Sbjct: 421 YYPLLKSCFRTGKTDYDLSNLLDEMINKHHLSLDISTYSLLIHGLCRANKCDWAYQLFEK 480
Query: 477 MIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
MI DI PRY TC+L+LDE KQK+M A++IE +MKKL
Sbjct: 481 MISQDIKPRYLTCQLLLDEFKQKNMDGVADRIEGIMKKL 519
>gi|225425882|ref|XP_002266563.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial [Vitis vinifera]
Length = 496
Score = 670 bits (1728), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 307/449 (68%), Positives = 375/449 (83%), Gaps = 1/449 (0%)
Query: 67 IDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGS 126
ID+I+S++ GSS+DEVF+SL D CNAI S LV+ L+HRFKDDWKSALG+FRWA S
Sbjct: 45 IDIIVSRIREGSSDDEVFKSLVHDEACNAIPMSQNLVDVLLHRFKDDWKSALGLFRWAES 104
Query: 127 CPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWED 186
GYEH+ E Y+MMVDILGK++Q+D+MRAL+EEM +G++V L+T+AK MRR +GAG+WED
Sbjct: 105 RLGYEHAPEAYDMMVDILGKLKQVDKMRALMEEMRQGNLVRLSTVAKAMRRLAGAGEWED 164
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHG 246
AVR FD+LG F LEKNTE+MNLLLDTLCKE KVE AR++FLELK I PN HTFNIFIHG
Sbjct: 165 AVRVFDDLGNFELEKNTESMNLLLDTLCKERKVEQARAIFLELKPHISPNTHTFNIFIHG 224
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
WCK NRVDEA+WTIQEMKGHGC PCVISYSTIIQSYCRQ NF KVYELLD+MQAQGC PN
Sbjct: 225 WCKANRVDEAEWTIQEMKGHGCRPCVISYSTIIQSYCRQSNFRKVYELLDDMQAQGCAPN 284
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
VVTYTT+M L K FEEA++I E+M+ VG KPD+ F+N LI+TLGRA +++EAV V++
Sbjct: 285 VVTYTTIMCSLTKVEQFEEALQIAERMRSVGCKPDTLFYNALIHTLGRAGQLREAVRVFE 344
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
VEMP+ GV P+TST+N+MI MF HH +KA ++L E+ CKP++QT++P+LKSCFK
Sbjct: 345 VEMPKTGVPPNTSTYNSMIAMFCHHSQEQKALNLLREIENSTFCKPDIQTYYPVLKSCFK 404
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
TGK D LS LDDMVNKHHLSLD++ YTL+IHGLCRANKCEW Y LF+EM+G ITPRY
Sbjct: 405 TGKIDS-LSNFLDDMVNKHHLSLDVSAYTLLIHGLCRANKCEWGYNLFEEMVGKAITPRY 463
Query: 487 QTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
+TC L+LDE+KQK+M+DAAE+IE MK++
Sbjct: 464 KTCALLLDEIKQKNMHDAAERIEVFMKQM 492
>gi|449494995|ref|XP_004159705.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial-like [Cucumis sativus]
Length = 488
Score = 657 bits (1694), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 298/450 (66%), Positives = 376/450 (83%)
Query: 66 DIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAG 125
DID II+KV VGSSEDEVFQSL QD VCN+IQ SH LV KL+ RFKDDWKSALG+FRWA
Sbjct: 39 DIDFIIAKVQVGSSEDEVFQSLLQDPVCNSIQLSHDLVYKLLQRFKDDWKSALGVFRWAE 98
Query: 126 SCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWE 185
S G++H+ ++Y++++D LGK +Q+ +MR +LEEM + +VTL+T+AK MRRF+GAGQWE
Sbjct: 99 SLSGFKHTPDLYDILIDTLGKTKQLVKMRGMLEEMKEARLVTLDTVAKAMRRFAGAGQWE 158
Query: 186 DAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIH 245
+AVR FD+L T+GLEKNTE+MN+LLDTLCKE KVE AR ++LELKS I PNA+TFN+FIH
Sbjct: 159 NAVRIFDDLETYGLEKNTESMNVLLDTLCKEKKVEKARQMYLELKSHIAPNANTFNMFIH 218
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
GWCK+N++DEA WT++EMKG+G PCVISYSTII YC + NF+KVYELLDEM AQGCP
Sbjct: 219 GWCKVNKIDEAHWTLEEMKGYGHRPCVISYSTIILFYCHRCNFNKVYELLDEMDAQGCPA 278
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
NV+TYTT+M L KS +FEEA++I E+MK G +PD+ F+NCLI+TLGRA +V+EA++V+
Sbjct: 279 NVITYTTIMCSLTKSEEFEEALQIAERMKSAGYEPDTLFYNCLIHTLGRAGKVREAIHVF 338
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
+VEMP V P+TST+N+MI M+ EKA +LEEM K EHCKP+VQT++PLLKSCF
Sbjct: 339 EVEMPSKSVLPNTSTYNSMIAMYCRRAREEKAMKLLEEMQKSEHCKPDVQTYYPLLKSCF 398
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
+TGKTD LS LLD+M+NKHHLSLDI+TY+L+IHGLCRANKC+WAY LF++MI DI PR
Sbjct: 399 RTGKTDYDLSNLLDEMINKHHLSLDISTYSLLIHGLCRANKCDWAYQLFEKMISQDIKPR 458
Query: 486 YQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
Y TC+L+LDE KQK+M A++IE +MKKL
Sbjct: 459 YLTCQLLLDEFKQKNMDGVADRIEGIMKKL 488
>gi|224110770|ref|XP_002315631.1| predicted protein [Populus trichocarpa]
gi|222864671|gb|EEF01802.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/447 (68%), Positives = 360/447 (80%), Gaps = 1/447 (0%)
Query: 67 IDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGS 126
++++ +K VGSS DE+ SL + VC+ I+ S+ LV+KL+ RFKDDWKSALG+FRWAG
Sbjct: 7 VNLVAAKARVGSSPDEILLSLADEQVCDNIEVSNDLVDKLLLRFKDDWKSALGVFRWAGL 66
Query: 127 CPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWED 186
PGY+H E Y+MMVDILGK++QMDQMR LLEEM++ H+VTLNT+ K MRRFSGAG+WED
Sbjct: 67 RPGYKHRPEAYDMMVDILGKMKQMDQMRELLEEMNRNHLVTLNTVGKAMRRFSGAGKWED 126
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHG 246
AVR FDELGTFGLEKN E+MNLLLDTLCKEGKVE AR++FLELKS I PNAHTFNIFIHG
Sbjct: 127 AVRMFDELGTFGLEKNAESMNLLLDTLCKEGKVEQARAIFLELKSHILPNAHTFNIFIHG 186
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
WCK N VDEA WT+QEMKGH PCVISYSTII YCRQ+NFSKVYELLDEM+AQGCPPN
Sbjct: 187 WCKANLVDEAHWTLQEMKGHAFRPCVISYSTIILFYCRQHNFSKVYELLDEMEAQGCPPN 246
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
VVTYTT++ +LAKS + EEA+++T++MK G KPD+ FFN LIY LGRA R QEAV V++
Sbjct: 247 VVTYTTIIVFLAKSQNTEEALQLTQRMKSAGCKPDTPFFNSLIYILGRAGRFQEAVDVFE 306
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
EMP GV+ DTST+N+MI M HHGH KA +L EM K + QTF+PLLKSC +
Sbjct: 307 KEMPNAGVSRDTSTYNSMIAMLCHHGHVSKALSLLREMETSAPFKLDGQTFYPLLKSCLR 366
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
TG + LSQLLDDMV KH LSLD + Y L+IHGLCRANKC+WAY LF+EMI DI P+Y
Sbjct: 367 TGDMN-LLSQLLDDMVKKHQLSLDRSAYALLIHGLCRANKCQWAYHLFEEMISKDIVPKY 425
Query: 487 QTCRLILDEVKQKHMYDAAEKIEAVMK 513
QTC ++L+EVK K MYD AEKIE MK
Sbjct: 426 QTCHMLLEEVKLKSMYDTAEKIEDFMK 452
>gi|356560497|ref|XP_003548528.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial-like [Glycine max]
Length = 490
Score = 622 bits (1603), Expect = e-175, Method: Compositional matrix adjust.
Identities = 281/449 (62%), Positives = 362/449 (80%)
Query: 67 IDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGS 126
+D++ +K+ GSSE+E +L D C+ I S LV++L+ R+KDDWKSALG+FRWA S
Sbjct: 42 VDILTAKLGKGSSEEETLHTLFNDQACDFIPLSRDLVHRLLWRYKDDWKSALGVFRWASS 101
Query: 127 CPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWED 186
P + HSSE Y+MMVDILG+++ M+++R LLEEM +G +V +NT+AK MRRF GAGQW D
Sbjct: 102 RPSFRHSSESYDMMVDILGRMKVMEKLRDLLEEMREGGLVNMNTVAKAMRRFVGAGQWVD 161
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHG 246
AVR FD+L GLEKNTE+MNLLLDTLCKE V+ AR +FLELK I PNAHTFNIFIHG
Sbjct: 162 AVRIFDDLQALGLEKNTESMNLLLDTLCKEKFVQQAREIFLELKQHIAPNAHTFNIFIHG 221
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
WCKI RVDEA WTIQEMKG+G HPCVISYST+IQ YC++ NFS+VYELLDEMQAQGC N
Sbjct: 222 WCKICRVDEAHWTIQEMKGYGFHPCVISYSTLIQCYCQEGNFSRVYELLDEMQAQGCSAN 281
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
V+TYT++M L K+ FEEA+++ E+M+ G +PD+ FFN LI+TLGRA R+ +A V++
Sbjct: 282 VITYTSIMCALGKAKKFEEALKVPERMRSSGCRPDTLFFNSLIHTLGRAGRLDDAADVFK 341
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
VEMP+ GV+P+TST+N+MI+MF +H ++A +L+EM CKP+ QT+HPL+KSCF+
Sbjct: 342 VEMPKAGVSPNTSTYNSMISMFCYHAQEKRALEILKEMENSGGCKPDAQTYHPLIKSCFR 401
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
+GK D LS++L+DM+NK HLSLD++TYTL+IHGLCR ++C WA+ LF+EMI DI PRY
Sbjct: 402 SGKIDGVLSEILNDMINKQHLSLDLSTYTLLIHGLCREDRCNWAFSLFEEMIDQDIIPRY 461
Query: 487 QTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
+TCRL+LDEVKQK+MY AAEKIE +MKKL
Sbjct: 462 RTCRLLLDEVKQKNMYQAAEKIEDLMKKL 490
>gi|357440039|ref|XP_003590297.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479345|gb|AES60548.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 661
Score = 603 bits (1555), Expect = e-170, Method: Compositional matrix adjust.
Identities = 279/471 (59%), Positives = 364/471 (77%), Gaps = 2/471 (0%)
Query: 39 SPIESYCSDGARLDHHQVLCVDSPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQP 98
S + +Y + AR H+ D R +D++ +K+ G+SED++ QSL D N I
Sbjct: 27 SSLATYHAAEARDFWHKEQTQDLTR--SVDILTTKIGKGNSEDDILQSLISDEGVNGIHL 84
Query: 99 SHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLE 158
S L+N+L+ R+KDDWKSAL IFRWAGS ++HS + Y+MMVDILG+++ MD+MR +LE
Sbjct: 85 SENLINRLLFRYKDDWKSALAIFRWAGSHSNFKHSQQSYDMMVDILGRMKAMDKMREILE 144
Query: 159 EMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
EM + ++TLNTIAKVMRRF GA QW+DAVR FD+L GLEKNTE+MN+LLDTLCKE
Sbjct: 145 EMRQESLITLNTIAKVMRRFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLLDTLCKEKF 204
Query: 219 VELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTI 278
VE AR ++LELK I PNAHTFNI IHGWC I RV+EA WTIQEMKG+GC PCVISYSTI
Sbjct: 205 VEQAREIYLELKHYIAPNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTI 264
Query: 279 IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
IQ YC++ NF +VY+LLDEMQAQ C PNVVTYTT+M LAK+ FEEA+++ E+M VG
Sbjct: 265 IQCYCQEQNFDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERMNAVGC 324
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
+PD+ FFN LIYTLGRA R+ +A +V++V MP+ VAP+TST+N+MI+MF ++ E+AF
Sbjct: 325 RPDTLFFNSLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTYNSMISMFCYYAQEERAF 384
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
+L+EM K CKP++QT+HPL+KSCFK + D L+ +L+DMVNK+H+ LD++TYTL+I
Sbjct: 385 GILKEMEKSGLCKPDIQTYHPLIKSCFKMREIDTWLNDILNDMVNKYHIGLDLSTYTLLI 444
Query: 459 HGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIE 509
HGL RA++C+WA+ LF+EM DI PRY+TCRL+LDEVKQK+M+ A KIE
Sbjct: 445 HGLYRADRCKWAFDLFEEMADQDIVPRYKTCRLLLDEVKQKNMHLAVVKIE 495
>gi|222423065|dbj|BAH19514.1| AT3G04130 [Arabidopsis thaliana]
Length = 508
Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust.
Identities = 268/446 (60%), Positives = 345/446 (77%), Gaps = 1/446 (0%)
Query: 68 DVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSC 127
+VI+ + SED+VF+ L D +C + S LV+KL+HRF+DDW+SALGI +WA SC
Sbjct: 55 NVIVGRDGDRDSEDDVFKRLSSDEICKRVNLSDGLVHKLLHRFRDDWRSALGILKWAESC 114
Query: 128 PGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G++HSS+ Y+M VDILGK ++ D+M+ +E M +VTLNT+AK+MRRF+GAG+WE+A
Sbjct: 115 KGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEA 174
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGW 247
V FD LG FGLEKNTE+MNLLLDTLCKE +VE AR V L+LKS I PNAHTFNIFIHGW
Sbjct: 175 VGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITPNAHTFNIFIHGW 234
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
CK NRV+EA WTIQEMKGHG PCVISY+TII+ YC+Q+ F KVYE+L EM+A G PPN
Sbjct: 235 CKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNS 294
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
+TYTT+MS L +FEEA+R+ +MK G KPDS F+NCLI+TL RA R++EA V++V
Sbjct: 295 ITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRV 354
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKT 427
EMPE GV+ +TST+N+MI M+ HH +KA +L+EM C P+V T+ PLL+SCFK
Sbjct: 355 EMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKR 414
Query: 428 GKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
G E + +LL +MV KHHLSLD +TYT +I LCRAN CEWAY LF+EMI DITPR++
Sbjct: 415 GDVVE-VGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHR 473
Query: 488 TCRLILDEVKQKHMYDAAEKIEAVMK 513
TC L+L+EVK+K+M+++AE+IE +MK
Sbjct: 474 TCLLLLEEVKKKNMHESAERIEHIMK 499
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 70/163 (42%), Gaps = 4/163 (2%)
Query: 178 FSGAGQWEDAVRTFD-ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC--IP 234
+ AG+ E+A R F E+ G+ NT T N ++ C + + A + E++S
Sbjct: 339 LARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCN 398
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEM-KGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
P+ HT+ + K V E ++EM H +Y+ +IQ CR Y
Sbjct: 399 PDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYC 458
Query: 294 LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIV 336
L +EM +Q P T ++ + K E A RI MK V
Sbjct: 459 LFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERIEHIMKTV 501
>gi|18396782|ref|NP_566222.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|79312733|ref|NP_001030630.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546763|sp|Q9M8W9.2|PP211_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04130, mitochondrial; Flags: Precursor
gi|332640519|gb|AEE74040.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332640520|gb|AEE74041.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 508
Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust.
Identities = 268/446 (60%), Positives = 345/446 (77%), Gaps = 1/446 (0%)
Query: 68 DVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSC 127
+VI+ + SED+VF+ L D +C + S LV+KL+HRF+DDW+SALGI +WA SC
Sbjct: 55 NVIVGRDGDRDSEDDVFKRLSSDEICKRVNLSDGLVHKLLHRFRDDWRSALGILKWAESC 114
Query: 128 PGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G++HSS+ Y+M VDILGK ++ D+M+ +E M +VTLNT+AK+MRRF+GAG+WE+A
Sbjct: 115 KGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEA 174
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGW 247
V FD LG FGLEKNTE+MNLLLDTLCKE +VE AR V L+LKS I PNAHTFNIFIHGW
Sbjct: 175 VGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITPNAHTFNIFIHGW 234
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
CK NRV+EA WTIQEMKGHG PCVISY+TII+ YC+Q+ F KVYE+L EM+A G PPN
Sbjct: 235 CKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNS 294
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
+TYTT+MS L +FEEA+R+ +MK G KPDS F+NCLI+TL RA R++EA V++V
Sbjct: 295 ITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRV 354
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKT 427
EMPE GV+ +TST+N+MI M+ HH +KA +L+EM C P+V T+ PLL+SCFK
Sbjct: 355 EMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKR 414
Query: 428 GKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
G E + +LL +MV KHHLSLD +TYT +I LCRAN CEWAY LF+EMI DITPR++
Sbjct: 415 GDVVE-VGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHR 473
Query: 488 TCRLILDEVKQKHMYDAAEKIEAVMK 513
TC L+L+EVK+K+M+++AE+IE +MK
Sbjct: 474 TCLLLLEEVKKKNMHESAERIEHIMK 499
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 70/163 (42%), Gaps = 4/163 (2%)
Query: 178 FSGAGQWEDAVRTFD-ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC--IP 234
+ AG+ E+A R F E+ G+ NT T N ++ C + + A + E++S
Sbjct: 339 LARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCN 398
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEM-KGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
P+ HT+ + K V E ++EM H +Y+ +IQ CR Y
Sbjct: 399 PDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYC 458
Query: 294 LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIV 336
L +EM +Q P T ++ + K E A RI MK V
Sbjct: 459 LFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERIEHIMKTV 501
>gi|6721172|gb|AAF26800.1|AC016829_24 hypothetical protein [Arabidopsis thaliana]
Length = 572
Score = 579 bits (1492), Expect = e-162, Method: Compositional matrix adjust.
Identities = 268/446 (60%), Positives = 345/446 (77%), Gaps = 1/446 (0%)
Query: 68 DVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSC 127
+VI+ + SED+VF+ L D +C + S LV+KL+HRF+DDW+SALGI +WA SC
Sbjct: 119 NVIVGRDGDRDSEDDVFKRLSSDEICKRVNLSDGLVHKLLHRFRDDWRSALGILKWAESC 178
Query: 128 PGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G++HSS+ Y+M VDILGK ++ D+M+ +E M +VTLNT+AK+MRRF+GAG+WE+A
Sbjct: 179 KGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEA 238
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGW 247
V FD LG FGLEKNTE+MNLLLDTLCKE +VE AR V L+LKS I PNAHTFNIFIHGW
Sbjct: 239 VGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITPNAHTFNIFIHGW 298
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
CK NRV+EA WTIQEMKGHG PCVISY+TII+ YC+Q+ F KVYE+L EM+A G PPN
Sbjct: 299 CKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNS 358
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
+TYTT+MS L +FEEA+R+ +MK G KPDS F+NCLI+TL RA R++EA V++V
Sbjct: 359 ITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRV 418
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKT 427
EMPE GV+ +TST+N+MI M+ HH +KA +L+EM C P+V T+ PLL+SCFK
Sbjct: 419 EMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKR 478
Query: 428 GKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
G E + +LL +MV KHHLSLD +TYT +I LCRAN CEWAY LF+EMI DITPR++
Sbjct: 479 GDVVE-VGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHR 537
Query: 488 TCRLILDEVKQKHMYDAAEKIEAVMK 513
TC L+L+EVK+K+M+++AE+IE +MK
Sbjct: 538 TCLLLLEEVKKKNMHESAERIEHIMK 563
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 70/163 (42%), Gaps = 4/163 (2%)
Query: 178 FSGAGQWEDAVRTFD-ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC--IP 234
+ AG+ E+A R F E+ G+ NT T N ++ C + + A + E++S
Sbjct: 403 LARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCN 462
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEM-KGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
P+ HT+ + K V E ++EM H +Y+ +IQ CR Y
Sbjct: 463 PDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYC 522
Query: 294 LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIV 336
L +EM +Q P T ++ + K E A RI MK V
Sbjct: 523 LFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERIEHIMKTV 565
>gi|297828902|ref|XP_002882333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328173|gb|EFH58592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 506
Score = 577 bits (1486), Expect = e-162, Method: Compositional matrix adjust.
Identities = 267/446 (59%), Positives = 344/446 (77%), Gaps = 1/446 (0%)
Query: 68 DVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSC 127
+VI+ + SED+VF+ L D +CN + S LV KL+HRF+DDWKSALG+ WA SC
Sbjct: 53 NVIVGRDGDRDSEDDVFKRLSNDEICNRVNLSDGLVYKLLHRFRDDWKSALGVLNWAESC 112
Query: 128 PGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G++HS++ Y+M VDILGK ++ D+++ +E M +VTLNTIAK+MRRF+GAG+WE+A
Sbjct: 113 KGHKHSNDAYDMAVDILGKAKKWDRLKVFVERMRGDKLVTLNTIAKIMRRFAGAGEWEEA 172
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGW 247
V FD+LG FGLEKNTE+MNLLLDTLCKE +VE AR V LELKS I PNAHTFNIFIHGW
Sbjct: 173 VGIFDKLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLELKSHITPNAHTFNIFIHGW 232
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
CK NRV+EA WTIQEMKGHG PCVISY+TII+ YC+Q F KVYE+L EM+A G PPN
Sbjct: 233 CKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQSEFVKVYEMLSEMEANGSPPNS 292
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
+TYTT+MS L +FEEA+R+ +MK G +PDS F+NCLI+TL R+ R++EA V++V
Sbjct: 293 ITYTTIMSSLNAQKEFEEALRVATRMKRSGCQPDSLFYNCLIHTLARSGRLEEAERVFRV 352
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKT 427
EMPE GV+ +TST+N+MI M+ HH +KA +L+EM C P+V T+ PLL+SCFK
Sbjct: 353 EMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKR 412
Query: 428 GKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
G E + +LL +MV KHHLSLD +TYT +I LCRAN CEWAY LF+EMI DITPR++
Sbjct: 413 GDVVE-VGKLLKEMVTKHHLSLDESTYTFLIQRLCRANICEWAYCLFEEMISQDITPRHR 471
Query: 488 TCRLILDEVKQKHMYDAAEKIEAVMK 513
TC L+L+EVK+K+M+++AE+IE +MK
Sbjct: 472 TCLLLLEEVKKKNMHESAERIEHIMK 497
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 70/163 (42%), Gaps = 4/163 (2%)
Query: 178 FSGAGQWEDAVRTFD-ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC--IP 234
+ +G+ E+A R F E+ G+ NT T N ++ C + + A + E++S
Sbjct: 337 LARSGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCN 396
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEM-KGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
P+ HT+ + K V E ++EM H +Y+ +IQ CR Y
Sbjct: 397 PDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANICEWAYC 456
Query: 294 LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIV 336
L +EM +Q P T ++ + K E A RI MK V
Sbjct: 457 LFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERIEHIMKTV 499
>gi|357142780|ref|XP_003572691.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial-like [Brachypodium distachyon]
Length = 501
Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust.
Identities = 222/443 (50%), Positives = 308/443 (69%), Gaps = 4/443 (0%)
Query: 73 KVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEH 132
K GS +D V QSL C IQP+ +V+ L+ +F DDWKSALG+F+WA S Y+H
Sbjct: 59 KARNGSVQDLV-QSLGIG--CPGIQPTSNIVDGLLSKFGDDWKSALGLFQWAQSSGNYKH 115
Query: 133 SSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
++ M+D+LGK+RQ+DQM LL +M +VT+ A +RR +GA +W+DAV FD
Sbjct: 116 TAYACSRMIDLLGKMRQIDQMWDLLSDMHCRGLVTVEAAATSIRRLAGARRWKDAVLLFD 175
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINR 252
+LG GLE+NTETMN+LLD LCKE KVE+AR VFL L I P+A+TFNIF+HGWC R
Sbjct: 176 KLGDMGLERNTETMNVLLDALCKEKKVEVARKVFLVLSPHIQPDAYTFNIFVHGWCSARR 235
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
+DEA WTI+EMK G P VI+Y+T++++YC+Q+NF VYE+LD M ++GC PNV+TYT
Sbjct: 236 IDEAMWTIEEMKAQGFPPSVITYTTVLEAYCKQHNFRMVYEILDSMSSEGCHPNVITYTM 295
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN 372
+M+ LAK FEEA+ ++ +MK G KPD+ F+N LI LG+A + EA V+QVEMP N
Sbjct: 296 IMTSLAKCHMFEEALSVSHRMKSSGCKPDTLFYNSLINLLGKAGHLSEASQVFQVEMPMN 355
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
GV +T+NTMI++F + E A VL+EM + + CKP++QT+ PLL+ D+
Sbjct: 356 GVPRSLATYNTMISVFCYKDLDEDALSVLKEM-ETQSCKPDLQTYRPLLRLFLSRRGQDD 414
Query: 433 CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLI 492
+ LL++++NKH L LD+ TYTL+IHGLCR + +WAY LF EM+G +I PRY+TC L+
Sbjct: 415 TVRNLLNELMNKHSLGLDLDTYTLLIHGLCRVGETDWAYRLFDEMVGSEIVPRYRTCELL 474
Query: 493 LDEVKQKHMYDAAEKIEAVMKKL 515
L E ++K M + E+I+ M +
Sbjct: 475 LSEAQRKKMEEWVERIQNYMTRF 497
>gi|125540181|gb|EAY86576.1| hypothetical protein OsI_07956 [Oryza sativa Indica Group]
gi|125582780|gb|EAZ23711.1| hypothetical protein OsJ_07414 [Oryza sativa Japonica Group]
gi|215768726|dbj|BAH00955.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 500
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 213/442 (48%), Positives = 306/442 (69%), Gaps = 4/442 (0%)
Query: 71 ISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGY 130
+SK S +D + Q L D C+ I+ + +V+ L+ +F DDWKSALG F+WA S Y
Sbjct: 56 LSKARKWSVQD-LIQCLGAD--CSGIRLTGNIVDTLLFKFGDDWKSALGFFQWAQSRDDY 112
Query: 131 EHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRT 190
H++ MVD+LGK+RQ+DQM LL +M +VT+ T+AK +RR +GA +W+D V
Sbjct: 113 RHTAYACNRMVDLLGKMRQIDQMWELLSDMHGRGLVTVETVAKSIRRLAGARRWKDVVLL 172
Query: 191 FDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKI 250
FD+L GLE+NTETMN+LLD LCKE K+E+AR VF L IPP+A+TFNIF+HGWC I
Sbjct: 173 FDKLEDMGLERNTETMNVLLDVLCKERKIEVAREVFAVLSPHIPPDAYTFNIFVHGWCSI 232
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
R+DEA WTI+EMK G P VI+Y+T++++YC+Q NF +VYE+LD M +QGC PNV+TY
Sbjct: 233 RRIDEAMWTIEEMKRRGFPPSVITYTTVLEAYCKQRNFRRVYEVLDSMGSQGCHPNVITY 292
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
T +M+ LAK FEEA+ ++ +MK G KPD+ F+N LI LG++ + EA V++VEMP
Sbjct: 293 TMIMTSLAKCERFEEALSVSHRMKSSGCKPDTLFYNSLINLLGKSGHLFEASQVFRVEMP 352
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKT 430
NGV+ + +T+NTMI++F ++G + A +VL+EM + + CKP++Q++ PLL+
Sbjct: 353 MNGVSHNLATYNTMISIFCYYGRDDDALNVLKEM-EAQSCKPDIQSYRPLLRLFLSRRGQ 411
Query: 431 DECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCR 490
+ + LL ++ +KH+L LD+ TYTL+IHGLCR WAY LF EM+ +I PR +TC
Sbjct: 412 ADTVRHLLSELTSKHNLGLDLDTYTLLIHGLCRVGDTVWAYQLFDEMVSSEIAPRSKTCV 471
Query: 491 LILDEVKQKHMYDAAEKIEAVM 512
++LDE ++ +M E+I M
Sbjct: 472 MLLDEAQRTNMETYVERIGNYM 493
>gi|297599556|ref|NP_001047351.2| Os02g0601600 [Oryza sativa Japonica Group]
gi|255671066|dbj|BAF09265.2| Os02g0601600 [Oryza sativa Japonica Group]
Length = 466
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 213/445 (47%), Positives = 306/445 (68%), Gaps = 4/445 (0%)
Query: 71 ISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGY 130
+SK S +D + Q L D C+ I+ + +V+ L+ +F DDWKSALG F+WA S Y
Sbjct: 22 LSKARKWSVQD-LIQCLGAD--CSGIRLTGNIVDTLLFKFGDDWKSALGFFQWAQSRDDY 78
Query: 131 EHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRT 190
H++ MVD+LGK+RQ+DQM LL +M +VT+ T+AK +RR +GA +W+D V
Sbjct: 79 RHTAYACNRMVDLLGKMRQIDQMWELLSDMHGRGLVTVETVAKSIRRLAGARRWKDVVLL 138
Query: 191 FDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKI 250
FD+L GLE+NTETMN+LLD LCKE K+E+AR VF L IPP+A+TFNIF+HGWC I
Sbjct: 139 FDKLEDMGLERNTETMNVLLDVLCKERKIEVAREVFAVLSPHIPPDAYTFNIFVHGWCSI 198
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
R+DEA WTI+EMK G P VI+Y+T++++YC+Q NF +VYE+LD M +QGC PNV+TY
Sbjct: 199 RRIDEAMWTIEEMKRRGFPPSVITYTTVLEAYCKQRNFRRVYEVLDSMGSQGCHPNVITY 258
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
T +M+ LAK FEEA+ ++ +MK G KPD+ F+N LI LG++ + EA V++VEMP
Sbjct: 259 TMIMTSLAKCERFEEALSVSHRMKSSGCKPDTLFYNSLINLLGKSGHLFEASQVFRVEMP 318
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKT 430
NGV+ + +T+NTMI++F ++G + A +VL+EM + + CKP++Q++ PLL+
Sbjct: 319 MNGVSHNLATYNTMISIFCYYGRDDDALNVLKEM-EAQSCKPDIQSYRPLLRLFLSRRGQ 377
Query: 431 DECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCR 490
+ + LL ++ +KH+L LD+ TYTL+IHGLCR WAY LF EM+ +I PR +TC
Sbjct: 378 ADTVRHLLSELTSKHNLGLDLDTYTLLIHGLCRVGDTVWAYQLFDEMVSSEIAPRSKTCV 437
Query: 491 LILDEVKQKHMYDAAEKIEAVMKKL 515
++LDE ++ +M E+I M
Sbjct: 438 MLLDEAQRTNMETYVERIGNYMSSF 462
>gi|47848296|dbj|BAD22160.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 454
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 210/437 (48%), Positives = 302/437 (69%), Gaps = 3/437 (0%)
Query: 79 SEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYE 138
S ++ Q L D C+ I+ + +V+ L+ +F DDWKSALG F+WA S Y H++
Sbjct: 17 SHHDLIQCLGAD--CSGIRLTGNIVDTLLFKFGDDWKSALGFFQWAQSRDDYRHTAYACN 74
Query: 139 MMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
MVD+LGK+RQ+DQM LL +M +VT+ T+AK +RR +GA +W+D V FD+L G
Sbjct: 75 RMVDLLGKMRQIDQMWELLSDMHGRGLVTVETVAKSIRRLAGARRWKDVVLLFDKLEDMG 134
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQW 258
LE+NTETMN+LLD LCKE K+E+AR VF L IPP+A+TFNIF+HGWC I R+DEA W
Sbjct: 135 LERNTETMNVLLDVLCKERKIEVAREVFAVLSPHIPPDAYTFNIFVHGWCSIRRIDEAMW 194
Query: 259 TIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLA 318
TI+EMK G P VI+Y+T++++YC+Q NF +VYE+LD M +QGC PNV+TYT +M+ LA
Sbjct: 195 TIEEMKRRGFPPSVITYTTVLEAYCKQRNFRRVYEVLDSMGSQGCHPNVITYTMIMTSLA 254
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDT 378
K FEEA+ ++ +MK G KPD+ F+N LI LG++ + EA V++VEMP NGV+ +
Sbjct: 255 KCERFEEALSVSHRMKSSGCKPDTLFYNSLINLLGKSGHLFEASQVFRVEMPMNGVSHNL 314
Query: 379 STFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLL 438
+T+NTMI++F ++G + A +VL+EM + + CKP++Q++ PLL+ + + LL
Sbjct: 315 ATYNTMISIFCYYGRDDDALNVLKEM-EAQSCKPDIQSYRPLLRLFLSRRGQADTVRHLL 373
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQ 498
++ +KH+L LD+ TYTL+IHGLCR WAY LF EM+ +I PR +TC ++LDE ++
Sbjct: 374 SELTSKHNLGLDLDTYTLLIHGLCRVGDTVWAYQLFDEMVSSEIAPRSKTCVMLLDEAQR 433
Query: 499 KHMYDAAEKIEAVMKKL 515
+M E+I M
Sbjct: 434 TNMETYVERIGNYMSSF 450
>gi|413937640|gb|AFW72191.1| hypothetical protein ZEAMMB73_762171 [Zea mays]
Length = 503
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/437 (46%), Positives = 297/437 (67%), Gaps = 5/437 (1%)
Query: 73 KVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGS-CPGYE 131
+ GS ED V ++L + C+ ++ + + + L+ D WK ALG F WA S GY
Sbjct: 60 RARKGSVEDLV-RALAAE--CSEVRLTSGVADSLLRGCGDCWKPALGFFLWAQSRGGGYS 116
Query: 132 HSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTF 191
H+ MVD+LGK RQ+D+M LL EM +VT++T+AK +RR + A +W DA+ F
Sbjct: 117 HTPYACSRMVDLLGKTRQIDRMWDLLSEMHCRGLVTVDTVAKSIRRLAAARKWRDAILLF 176
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKIN 251
D+L GLE+NTETMN+LLD LCKE KVELAR VF+ L I P+A+TFNIF+HGWC +
Sbjct: 177 DQLEDLGLERNTETMNVLLDALCKEKKVELAREVFVMLSPHIAPDAYTFNIFVHGWCSVR 236
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
R+DEA WTI+EMK G P VI+Y+ ++++YC+Q NF +VYE+LD M +QGC PNV+TYT
Sbjct: 237 RIDEALWTIEEMKTRGFPPIVITYTAVLEAYCKQRNFRRVYEVLDSMGSQGCHPNVITYT 296
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
+M+ L K FEEA+ ++++MK G KPD+ F+N LI LGRA + EA V++VEMP
Sbjct: 297 MIMTSLTKCERFEEALSVSDRMKSSGCKPDTLFYNALINLLGRAGHLFEANQVFRVEMPR 356
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
NGV + +T+NTMI++ +G + A VL+EM + + CKP++QT+ PLL+
Sbjct: 357 NGVLRNVATYNTMISILCQYGRDDDALGVLKEM-EAQSCKPDLQTYQPLLRLLLGRRGQA 415
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRL 491
+ +LL ++ +++ L LD+ TYTL+IHGLC+ + +WAYLL+ EM+G +I PR +TC L
Sbjct: 416 AAVHRLLSELRDRNGLGLDLDTYTLLIHGLCKVGETDWAYLLYDEMVGSEIVPRPRTCEL 475
Query: 492 ILDEVKQKHMYDAAEKI 508
+L E+++++M E+I
Sbjct: 476 LLSEMQRQNMEAYVERI 492
>gi|242062226|ref|XP_002452402.1| hypothetical protein SORBIDRAFT_04g025130 [Sorghum bicolor]
gi|241932233|gb|EES05378.1| hypothetical protein SORBIDRAFT_04g025130 [Sorghum bicolor]
Length = 506
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/438 (47%), Positives = 298/438 (68%), Gaps = 5/438 (1%)
Query: 73 KVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGS-CPGYE 131
+ GS ED V ++L + C+ ++ + + + L+ R DDWKSALG F WA S GY
Sbjct: 63 RARKGSVEDLV-RTLAAE--CSEVRLTSGVADSLLRRCGDDWKSALGFFLWAQSRGGGYS 119
Query: 132 HSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTF 191
H+ MVD+LGK+RQ+D+M LL EM +VT++TIAK +RR + A +W DA+ F
Sbjct: 120 HTPCACNRMVDLLGKMRQIDRMWDLLSEMHCRGLVTVDTIAKSIRRLAAARRWRDAILLF 179
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKIN 251
D+L GLE+NTETMN+LLD LCKE KVELAR VF+ L I P+A+TFNIF+HGWC +
Sbjct: 180 DQLEDLGLERNTETMNVLLDALCKERKVELAREVFVMLSPHIAPDAYTFNIFVHGWCSVR 239
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
R+DEA WTI+EMK G P VI+Y+ ++++YC+Q NF +VYE+LD M +QGC PNV+TYT
Sbjct: 240 RIDEAMWTIEEMKNRGFPPIVITYTAVLEAYCKQRNFRRVYEILDSMSSQGCHPNVITYT 299
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
+M+ L K FEEA+ ++++MK G KPD+ F+N LI LGRA + EA V++VEMP
Sbjct: 300 MIMTSLTKCERFEEALSVSDRMKSSGCKPDTLFYNALINLLGRAGHLFEANQVFRVEMPR 359
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
N V + +T+NTMI++ +G + A VL+EM + CKP++QT+ PLL+ F
Sbjct: 360 NVVPRNVATYNTMISILCQYGRDDDALDVLKEMEA-QSCKPDLQTYQPLLRLLFGRRGQT 418
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRL 491
+ LL ++ +++ L LD+ TYTL+IHGLCR + +WAY L+ EM+G +I PR +TC L
Sbjct: 419 GAIHHLLSELRDRNGLGLDLDTYTLLIHGLCRVGETDWAYQLYDEMVGSEIVPRPKTCEL 478
Query: 492 ILDEVKQKHMYDAAEKIE 509
+L E ++++M E+I+
Sbjct: 479 LLSETQRQNMEVYVERIQ 496
>gi|357501403|ref|XP_003620990.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496005|gb|AES77208.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 422
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/469 (44%), Positives = 292/469 (62%), Gaps = 68/469 (14%)
Query: 27 SSSENCSHIVSSSPIESYCSDGARLDHHQVLCVDSPRLPDIDVIISKVHVGSSEDEVFQS 86
+S + S + +S P E D R + Q L +D++ +K+ G+SED + QS
Sbjct: 21 ASRTSFSSLATSHPTE--VRDFWRKEQSQDLT------RSVDILTTKIGKGNSEDVILQS 72
Query: 87 LKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGK 146
L D N I S L+N+L+ R+KDDWKSAL +FRWA
Sbjct: 73 LISDGAINVIHLSENLINRLLFRYKDDWKSALAVFRWA---------------------- 110
Query: 147 VRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETM 206
M++MR +LEEM + ++ L+TI W+DAVRTFD+L GLEKNTE+M
Sbjct: 111 ---MEKMREILEEMRQESLIALDTI------------WKDAVRTFDDLQFLGLEKNTESM 155
Query: 207 NLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
N+LLDTLCKE VE AR ++LELK + PNAHTFNI IHGWC I + I +
Sbjct: 156 NVLLDTLCKEKFVEQAREIYLELKHYVAPNAHTFNILIHGWCNIRLIPPLFNVIVK---- 211
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
II ++ ++ + + + PPNVVTYTT+M LAK+ F+EA
Sbjct: 212 ----------NIISTWFTTFSM--------KCKLKIAPPNVVTYTTIMCALAKAEKFDEA 253
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
+++ E+M VG +PD+ FFN IYT+GRA R+ +A ++++V MP+ VAP+TST+N+MI+
Sbjct: 254 LQVVERMNAVGCRPDTLFFNSFIYTMGRAGRIDDATHIFKVAMPKASVAPNTSTYNSMIS 313
Query: 387 MFSHHGHHEKAFHVLEEMNKLEHCKPNVQT-FHPLLKSCFKTGKTDECLSQLLDDMVNKH 445
MF ++ E+AF +L+EM K CKP++QT +HPL+KSCFK K D L+ +L DMVNK+
Sbjct: 314 MFCYYAQKERAFDILKEMEKSGLCKPDIQTYYHPLIKSCFKMRKVDTWLNDILSDMVNKY 373
Query: 446 HLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
H+ LD++TYTL+IHGLCRA++C+WA+ LF+EM+ DI PRY+TCRL+LD
Sbjct: 374 HIGLDLSTYTLLIHGLCRADRCKWAFNLFEEMVDQDIMPRYKTCRLLLD 422
>gi|225432738|ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial [Vitis vinifera]
Length = 535
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 189/438 (43%), Positives = 280/438 (63%), Gaps = 9/438 (2%)
Query: 78 SSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIY 137
SS D V Q+L C + S LV +++ RF +DW A G F+WA + GY HS Y
Sbjct: 101 SSADAVVQALGG---C-GVSVSESLVEQVLKRFSNDWIPAFGFFKWAKAQTGYRHSMNSY 156
Query: 138 EMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGT 196
MVDILGK+++ D M L+EEM + G V+L T+ KVMRR + A +W+DA+ F +
Sbjct: 157 NSMVDILGKLKKFDLMWELVEEMDRLGGYVSLATMTKVMRRLARASRWKDAIEAFRGMER 216
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEA 256
FG++K+T MN L+D L KE VE A VF+E K I N HTFN+ IHGWCK ++D A
Sbjct: 217 FGVKKDTLAMNTLMDALVKENSVEHANDVFVEFKDSILLNPHTFNVLIHGWCKARKMDNA 276
Query: 257 QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSY 316
++ EMK HG P VISY++I+++YCR+ +F KV +L+EM+ +GCPPNVVTYT VM
Sbjct: 277 LKSMAEMKEHGFCPDVISYTSIVEAYCREKDFRKVNSVLNEMEEKGCPPNVVTYTIVMHA 336
Query: 317 LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
L K + +A+ + EKMK PD+ F++ LIY L +A R+++A V++ +M + G P
Sbjct: 337 LGKGKEISKALEVYEKMKGSSCVPDTSFYSSLIYILSKAGRLKDARDVFE-DMTKQGAIP 395
Query: 377 DTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQ 436
D T+NTMI+ H E A +L +M + CKP++ T+ PLLK C + + + LS
Sbjct: 396 DVLTYNTMISAACMHSQEEDALKLLLKMEE-SSCKPDLNTYSPLLKMCCRNNRM-KVLSA 453
Query: 437 LLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV 496
LL+ M K+ +SL++ TY+L++HGLC++ K E A L F+EM+ + P+ T +L+L E+
Sbjct: 454 LLNHMF-KNDISLEVGTYSLLVHGLCKSGKLEHACLFFEEMVSKGLVPKDCTHKLLLKEL 512
Query: 497 KQKHMYDAAEKIEAVMKK 514
++K M +A E++E +M +
Sbjct: 513 EKKSMVEAKERVEKLMSQ 530
>gi|326517954|dbj|BAK07229.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 549
Score = 354 bits (909), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 173/418 (41%), Positives = 271/418 (64%), Gaps = 5/418 (1%)
Query: 93 CNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQ 152
C ++ S +V+K++ RF DW +A G F WAG+ GY HS++ Y MVDILGK +Q D
Sbjct: 119 CCPVRVSDRMVDKILRRFGSDWVAAFGFFMWAGAQEGYRHSADSYNSMVDILGKFKQFDL 178
Query: 153 MRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLD 211
M L+ +M + G +V+L T+ KVMRR +GA +W DA+ F+++ FG+ K+T MN+LLD
Sbjct: 179 MWGLISQMDEIGGLVSLATMTKVMRRLAGASRWTDAIDAFNKMDQFGVVKDTTAMNVLLD 238
Query: 212 TLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPC 271
TLCKE V+ AR F EL+ +PP+ +FN +HGWCK ++EA+ ++EM+ HG P
Sbjct: 239 TLCKERSVKRARGAFQELRGSVPPDESSFNTLVHGWCKARMMNEARDMMKEMEEHGFKPS 298
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
VI+Y+++I++YC + +F VY +L+EM+++GCPPNV+TYT VM L K+G +EA+ I +
Sbjct: 299 VITYTSLIEAYCMEKDFQTVYAILNEMRSKGCPPNVITYTIVMHALGKAGRTQEALDIFD 358
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHH 391
K++ G PD+ F+N LIY LGRA R+++A V +M GV P +TFNT+I+ H
Sbjct: 359 KVRGDGCAPDASFYNSLIYILGRAGRLEDANSVVD-KMRMTGVRPTVATFNTLISAACDH 417
Query: 392 GHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDI 451
E A +L +M + + CKP+++T+ PLLK C K + + L L+ M K ++ D
Sbjct: 418 SQAENALKMLVKMEE-QSCKPDIKTYTPLLKLCCKR-QWIKVLRFLICHMFRK-DITPDF 474
Query: 452 TTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIE 509
+TYTL++ LCR K + L +EM+ P+ +T L+ +++ + +++ A +KI+
Sbjct: 475 STYTLLVTWLCRNGKPAQSCLFLEEMVLKGFAPKKETFDLVAEKLDKANLHSAKKKIQ 532
>gi|108711050|gb|ABF98845.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215693326|dbj|BAG88708.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625789|gb|EEE59921.1| hypothetical protein OsJ_12549 [Oryza sativa Japonica Group]
Length = 554
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 172/420 (40%), Positives = 274/420 (65%), Gaps = 5/420 (1%)
Query: 93 CNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQ 152
C +++ + LV+K++ RF +DW +A G F W G+ GY H ++ Y++MVDILGK +Q D
Sbjct: 125 CCSVRVTGCLVDKILTRFSNDWVAAFGFFMWVGTQGGYCHCADSYDLMVDILGKFKQFDL 184
Query: 153 MRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLD 211
M L+ +M + G +++L T+ KVMRR +GA +W +A+ F ++ FG+ K+T+ MN+LLD
Sbjct: 185 MWGLINQMVEVGGLMSLMTMTKVMRRLAGASRWTEAIDAFHKMDRFGVVKDTKAMNVLLD 244
Query: 212 TLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPC 271
TLCKE V+ AR VF EL+ IPP+ ++FN +HGWCK + EA T++EMK HG P
Sbjct: 245 TLCKERSVKRARGVFQELRGTIPPDENSFNTLVHGWCKARMLKEALDTMEEMKQHGFSPS 304
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
V++Y++++++YC + +F VY LLDEM+ + CPPNVVTYT +M L K+G EA+ +
Sbjct: 305 VVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALDTFD 364
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHH 391
K+K G PD+ F+N LIY LGRA R+++A V + EM G+AP+ +TFNT+I+ H
Sbjct: 365 KLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVE-EMRTTGIAPNVTTFNTLISAACDH 423
Query: 392 GHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDI 451
E A +L +M + + C P+++T+ PLLK C K + + L L+ M K +S D
Sbjct: 424 SQAENALKLLVKMEE-QSCNPDIKTYTPLLKLCCKR-QWVKILLFLVCHMFRK-DISPDF 480
Query: 452 TTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAV 511
+TYTL++ LCR K + L +EM+ P+ +T L++++++++++ +KI+ +
Sbjct: 481 STYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAPKQETFDLVMEKLEKRNLQSVYKKIQVL 540
>gi|115455297|ref|NP_001051249.1| Os03g0746400 [Oryza sativa Japonica Group]
gi|113549720|dbj|BAF13163.1| Os03g0746400, partial [Oryza sativa Japonica Group]
Length = 613
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 172/420 (40%), Positives = 274/420 (65%), Gaps = 5/420 (1%)
Query: 93 CNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQ 152
C +++ + LV+K++ RF +DW +A G F W G+ GY H ++ Y++MVDILGK +Q D
Sbjct: 184 CCSVRVTGCLVDKILTRFSNDWVAAFGFFMWVGTQGGYCHCADSYDLMVDILGKFKQFDL 243
Query: 153 MRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLD 211
M L+ +M + G +++L T+ KVMRR +GA +W +A+ F ++ FG+ K+T+ MN+LLD
Sbjct: 244 MWGLINQMVEVGGLMSLMTMTKVMRRLAGASRWTEAIDAFHKMDRFGVVKDTKAMNVLLD 303
Query: 212 TLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPC 271
TLCKE V+ AR VF EL+ IPP+ ++FN +HGWCK + EA T++EMK HG P
Sbjct: 304 TLCKERSVKRARGVFQELRGTIPPDENSFNTLVHGWCKARMLKEALDTMEEMKQHGFSPS 363
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
V++Y++++++YC + +F VY LLDEM+ + CPPNVVTYT +M L K+G EA+ +
Sbjct: 364 VVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALDTFD 423
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHH 391
K+K G PD+ F+N LIY LGRA R+++A V + EM G+AP+ +TFNT+I+ H
Sbjct: 424 KLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVE-EMRTTGIAPNVTTFNTLISAACDH 482
Query: 392 GHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDI 451
E A +L +M + + C P+++T+ PLLK C K + + L L+ M K +S D
Sbjct: 483 SQAENALKLLVKMEE-QSCNPDIKTYTPLLKLCCKR-QWVKILLFLVCHMFRK-DISPDF 539
Query: 452 TTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAV 511
+TYTL++ LCR K + L +EM+ P+ +T L++++++++++ +KI+ +
Sbjct: 540 STYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAPKQETFDLVMEKLEKRNLQSVYKKIQVL 599
>gi|218193742|gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group]
Length = 1874
Score = 350 bits (899), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 172/420 (40%), Positives = 274/420 (65%), Gaps = 5/420 (1%)
Query: 93 CNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQ 152
C +++ + LV+K++ RF +DW +A G F W G+ GY H ++ Y++MVDILGK +Q D
Sbjct: 1445 CCSVRVTGCLVDKILTRFSNDWVAAFGFFMWVGTQGGYCHCADSYDLMVDILGKFKQFDL 1504
Query: 153 MRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLD 211
M L+ +M + G +++L T+ KVMRR +GA +W +A+ F ++ FG+ K+T+ MN+LLD
Sbjct: 1505 MWGLINQMVEVGGLMSLMTMTKVMRRLAGASRWTEAIDAFHKMDRFGVVKDTKAMNVLLD 1564
Query: 212 TLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPC 271
TLCKE V+ AR VF EL+ IPP+ ++FN +HGWCK + EA T++EMK HG P
Sbjct: 1565 TLCKERSVKRARGVFQELRGTIPPDENSFNTLVHGWCKARMLKEALDTMEEMKQHGFSPS 1624
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
V++Y++++++YC + +F VY LLDEM+ + CPPNVVTYT +M L K+G EA+ +
Sbjct: 1625 VVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALDTFD 1684
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHH 391
K+K G PD+ F+N LIY LGRA R+++A V + EM G+AP+ +TFNT+I+ H
Sbjct: 1685 KLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVE-EMRTTGIAPNVTTFNTLISAACDH 1743
Query: 392 GHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDI 451
E A +L +M + + C P+++T+ PLLK C K + + L L+ M K +S D
Sbjct: 1744 SQAENALKLLVKMEE-QSCNPDIKTYTPLLKLCCKR-QWVKILLFLVCHMFRK-DISPDF 1800
Query: 452 TTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAV 511
+TYTL++ LCR K + L +EM+ P+ +T L++++++++++ +KI+ +
Sbjct: 1801 STYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAPKQETFDLVMEKLEKRNLQSVYKKIQVL 1860
>gi|21686921|gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1833
Score = 350 bits (898), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 172/420 (40%), Positives = 274/420 (65%), Gaps = 5/420 (1%)
Query: 93 CNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQ 152
C +++ + LV+K++ RF +DW +A G F W G+ GY H ++ Y++MVDILGK +Q D
Sbjct: 1404 CCSVRVTGCLVDKILTRFSNDWVAAFGFFMWVGTQGGYCHCADSYDLMVDILGKFKQFDL 1463
Query: 153 MRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLD 211
M L+ +M + G +++L T+ KVMRR +GA +W +A+ F ++ FG+ K+T+ MN+LLD
Sbjct: 1464 MWGLINQMVEVGGLMSLMTMTKVMRRLAGASRWTEAIDAFHKMDRFGVVKDTKAMNVLLD 1523
Query: 212 TLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPC 271
TLCKE V+ AR VF EL+ IPP+ ++FN +HGWCK + EA T++EMK HG P
Sbjct: 1524 TLCKERSVKRARGVFQELRGTIPPDENSFNTLVHGWCKARMLKEALDTMEEMKQHGFSPS 1583
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
V++Y++++++YC + +F VY LLDEM+ + CPPNVVTYT +M L K+G EA+ +
Sbjct: 1584 VVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALDTFD 1643
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHH 391
K+K G PD+ F+N LIY LGRA R+++A V + EM G+AP+ +TFNT+I+ H
Sbjct: 1644 KLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVE-EMRTTGIAPNVTTFNTLISAACDH 1702
Query: 392 GHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDI 451
E A +L +M + + C P+++T+ PLLK C K + + L L+ M K +S D
Sbjct: 1703 SQAENALKLLVKMEE-QSCNPDIKTYTPLLKLCCKR-QWVKILLFLVCHMFRK-DISPDF 1759
Query: 452 TTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAV 511
+TYTL++ LCR K + L +EM+ P+ +T L++++++++++ +KI+ +
Sbjct: 1760 STYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAPKQETFDLVMEKLEKRNLQSVYKKIQVL 1819
>gi|357115308|ref|XP_003559432.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Brachypodium distachyon]
Length = 570
Score = 348 bits (892), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 169/418 (40%), Positives = 272/418 (65%), Gaps = 5/418 (1%)
Query: 93 CNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQ 152
C ++ S +V+K++ RF DW +A G F WAG+ GY H +++Y +MVDILGK +Q D
Sbjct: 119 CCPVRVSGRMVDKILRRFGSDWVAAFGFFMWAGAQEGYCHHADLYNLMVDILGKFKQFDL 178
Query: 153 MRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLD 211
+ L+ +M + G +V+L T+ KVMRR +GA +W DA+ F+++ FG+ ++T+ MN LLD
Sbjct: 179 LWGLIRQMDEIGCLVSLATMTKVMRRLAGANRWTDAIDAFNKMDQFGVVRDTKAMNALLD 238
Query: 212 TLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPC 271
TLCKE V+ AR VF EL+ +PP+ +FN +HGWC+ ++EA+ T++EM+ HG P
Sbjct: 239 TLCKEKSVKRARGVFQELRGVVPPDESSFNTLVHGWCQARMLNEARDTMKEMEEHGFSPS 298
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
VI+Y+++I++YC + +F VY +L+EM ++GC PNV+TYT VM L K+G +EA+ + +
Sbjct: 299 VITYTSLIEAYCMEKDFQTVYAILNEMCSKGCRPNVITYTIVMHALGKAGRTQEALDVFD 358
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHH 391
K+K G PD+ F+N +IY LGRA R+++A V+ EM G+ P + FNTMI+ H
Sbjct: 359 KVKRDGCVPDASFYNSIIYILGRAGRLEDANSVFD-EMCRTGIPPTVAIFNTMISAACDH 417
Query: 392 GHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDI 451
E A +L +M + + CKP+++T+ PLLK C K + + L L+ M K +S D
Sbjct: 418 SQAENALKILVKMEE-QSCKPDIKTYTPLLKLCCKR-QWMKILPFLICHMFRK-DISPDF 474
Query: 452 TTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIE 509
+TY L++ LCR K + L +EM+ P+ +T L+++++ + +++ A +KI+
Sbjct: 475 STYILLVTWLCRNGKPAQSCLFLEEMVLKGFMPKQETFDLVMEKLDKGNLHSAKKKIQ 532
>gi|308082018|ref|NP_001183846.1| uncharacterized protein LOC100502439 [Zea mays]
gi|238014984|gb|ACR38527.1| unknown [Zea mays]
gi|414872746|tpg|DAA51303.1| TPA: hypothetical protein ZEAMMB73_971718 [Zea mays]
Length = 623
Score = 347 bits (890), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 176/418 (42%), Positives = 265/418 (63%), Gaps = 5/418 (1%)
Query: 93 CNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQ 152
C ++ S LV+K++ RF +DW +A G F WAG+ GY H ++ Y+MMVDILGK +Q D
Sbjct: 156 CCPVRVSARLVSKVLSRFSNDWVAAFGFFMWAGTQEGYCHCADSYDMMVDILGKFKQFDL 215
Query: 153 MRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLD 211
M L+ +M + G +V+L T+ KVMRR GA +W DA+ F ++ FG+ K+T+ MN+LLD
Sbjct: 216 MCGLIGQMHEIGGLVSLATMTKVMRRLCGANRWSDAIDAFHKMDRFGVAKDTKAMNVLLD 275
Query: 212 TLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPC 271
TLCKE V+ AR F LK IPP+ +FN +HGWCK + EA+ T++EM+ HG P
Sbjct: 276 TLCKERSVKRARGAFQALKGTIPPDESSFNTLVHGWCKARMLKEARETMKEMERHGFSPS 335
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
V +Y+ +I++YC + +F V +LDEM +GC PN++TYT VM L K+G +EA+ +
Sbjct: 336 VTTYTCLIEAYCMEKDFQTVDGILDEMHTKGCTPNIITYTIVMHALGKAGRTQEALDTFD 395
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHH 391
K+K G D+ F+NCLIY L RA R+Q+A +V + EM G++P+ +TFNT+I+ H
Sbjct: 396 KVKQDGCALDASFYNCLIYILCRAGRLQDANFVVE-EMHRTGISPNLTTFNTLISAACDH 454
Query: 392 GHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDI 451
E A +L +M + + C P+++T+ PLLK C + K + L L+ M K ++ D
Sbjct: 455 SLAENALKLLVQMEE-QSCNPDIKTYTPLLKLCCRR-KWVKTLLFLICHMFRK-DITPDF 511
Query: 452 TTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIE 509
+TYTL++ LCR + + L +EM+ TP+ T L+L+++K HM A KI+
Sbjct: 512 STYTLLVCWLCRNGRLTQSCLFLEEMVLKGFTPQQATFDLVLEKLKNMHMLSAVRKIQ 569
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 115/280 (41%), Gaps = 37/280 (13%)
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
CH C SY ++ + F + L+ +M G ++ T T VM L + + +AI
Sbjct: 194 CH-CADSYDMMVDILGKFKQFDLMCGLIGQMHEIGGLVSLATMTKVMRRLCGANRWSDAI 252
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV-------------------- 367
KM G D++ N L+ TL + V+ A +Q
Sbjct: 253 DAFHKMDRFGVAKDTKAMNVLLDTLCKERSVKRARGAFQALKGTIPPDESSFNTLVHGWC 312
Query: 368 -------------EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNV 414
EM +G +P +T+ +I + + +L+EM+ + C PN+
Sbjct: 313 KARMLKEARETMKEMERHGFSPSVTTYTCLIEAYCMEKDFQTVDGILDEMHT-KGCTPNI 371
Query: 415 QTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLF 474
T+ ++ + K G+T E L D V + +LD + Y +I+ LCRA + + A +
Sbjct: 372 ITYTIVMHALGKAGRTQEALDTF--DKVKQDGCALDASFYNCLIYILCRAGRLQDANFVV 429
Query: 475 KEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
+EM I+P T ++ + + A K+ M++
Sbjct: 430 EEMHRTGISPNLTTFNTLISAACDHSLAENALKLLVQMEE 469
>gi|356540343|ref|XP_003538649.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Glycine max]
Length = 543
Score = 344 bits (882), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 186/460 (40%), Positives = 283/460 (61%), Gaps = 12/460 (2%)
Query: 61 SPRLPDIDVI--ISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSAL 118
SP+ ++D + I+KV +L D + + QPS LV+++++RF +DW AL
Sbjct: 85 SPKQDNLDELDAITKVLKKRYPSPELAALALDGL--SFQPSSGLVSQVLNRFSNDWVPAL 142
Query: 119 GIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK---GHIVTLNTIAKVM 175
G F+WA S GY HS E+ +MVDILGK + D M L+EEM+K G+ VTL T+AKV+
Sbjct: 143 GFFKWAKSQTGYRHSPELCNLMVDILGKCKSFDPMSDLVEEMAKLEQGY-VTLETMAKVI 201
Query: 176 RRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPP 235
RR + A + EDA+ F + FG+ K+T +N+L+D L K VE A V LE K IP
Sbjct: 202 RRLAKARKHEDAIEAFRRMDKFGVNKDTAALNVLIDALVKGDSVEHAHKVVLEFKGLIPL 261
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
++H+FN+ +HGWC+ + D A+ +++MK G P V SY++ I++YC + +F KV ++L
Sbjct: 262 SSHSFNVLMHGWCRARKFDNARKAMEDMKELGFEPDVFSYTSFIEAYCHERDFRKVDQVL 321
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
+EM+ GCPPN VTYTTVM +L K+G +A+ + EKMK G D+ ++C+I+ LG+A
Sbjct: 322 EEMRENGCPPNAVTYTTVMLHLGKAGQLSKALEVYEKMKCDGCVADTPVYSCMIFILGKA 381
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQ 415
R+++A V++ +MP+ GV D T+NTMI+ H E A +L+EM CKPNV
Sbjct: 382 GRLKDACDVFE-DMPKQGVVRDVVTYNTMISTACAHSREETALRLLKEMED-GSCKPNVG 439
Query: 416 TFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFK 475
T+HPLLK C K + + L LLD M K+ +S D+ TY+L+++ LC+ K AY +
Sbjct: 440 TYHPLLKMCCKKKRM-KVLKFLLDHMF-KNDISPDLATYSLLVNALCKTGKVADAYSFLE 497
Query: 476 EMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
EM+ TP+ T + + E++ M + E++E M +
Sbjct: 498 EMVLKGFTPKPSTLKGLAGELESLSMLEEKERVEEWMDRF 537
>gi|297738349|emb|CBI27550.3| unnamed protein product [Vitis vinifera]
Length = 330
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 165/253 (65%), Positives = 191/253 (75%), Gaps = 30/253 (11%)
Query: 67 IDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGS 126
ID+I+S++ GSS+DEVF+SL D CNAI S LV+ L+HRFKDDWKSALG+FRWA S
Sbjct: 45 IDIIVSRIREGSSDDEVFKSLVHDEACNAIPMSQNLVDVLLHRFKDDWKSALGLFRWAES 104
Query: 127 CPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWED 186
GYEH+ E Y+MMVDILGK++Q+D+MRAL+EEM +G++V L+T
Sbjct: 105 RLGYEHAPEAYDMMVDILGKLKQVDKMRALMEEMRQGNLVRLST---------------- 148
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHG 246
KNTE+MNLLLDTLCKE KVE AR++FLELK I PN HTFNIFIHG
Sbjct: 149 --------------KNTESMNLLLDTLCKERKVEQARAIFLELKPHISPNTHTFNIFIHG 194
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
WCK NRVDEA+WTIQEMKGHGC PCVISYSTIIQSYCRQ NF KVYELLD+MQAQGC PN
Sbjct: 195 WCKANRVDEAEWTIQEMKGHGCRPCVISYSTIIQSYCRQSNFRKVYELLDDMQAQGCAPN 254
Query: 307 VVTYTTVMSYLAK 319
VVTYTT+M L K
Sbjct: 255 VVTYTTIMCSLTK 267
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 122/218 (55%), Gaps = 16/218 (7%)
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMK----IVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
Y ++ L K ++ + E+M+ + S ++ N L+ TL + +V++A +
Sbjct: 114 AYDMMVDILGKLKQVDKMRALMEEMRQGNLVRLSTKNTESMNLLLDTLCKERKVEQARAI 173
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
+ P ++P+T TFN I + ++A ++EM K C+P V ++ +++S
Sbjct: 174 FLELKPH--ISPNTHTFNIFIHGWCKANRVDEAEWTIQEM-KGHGCRPCVISYSTIIQSY 230
Query: 425 FKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC-------RANKCEWAYLLFKEM 477
+ + + +LLDDM + ++ TYT ++ L RANKCEW Y LF+EM
Sbjct: 231 CRQSNFRK-VYELLDDM-QAQGCAPNVVTYTTIMCSLTKRLFVFLRANKCEWGYNLFEEM 288
Query: 478 IGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
+G ITPRY+TC L+LDE+KQK+M+DAAE+IE MK++
Sbjct: 289 VGKAITPRYKTCALLLDEIKQKNMHDAAERIEVFMKQM 326
>gi|356495784|ref|XP_003516753.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Glycine max]
Length = 558
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 183/459 (39%), Positives = 281/459 (61%), Gaps = 11/459 (2%)
Query: 61 SPRLPDIDVI--ISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSAL 118
SP+ ++D + ++KV SL D + + QPS LV+++++RF +DW AL
Sbjct: 88 SPKQDNLDELEAVTKVLQKRYPSPELASLALDGL--SFQPSSGLVSQVLNRFSNDWVPAL 145
Query: 119 GIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK--GHIVTLNTIAKVMR 176
G F+WA S GY HS E+Y +MVDILGK R D M L+EEM++ G+ VTL T+ KVMR
Sbjct: 146 GFFKWAKSLTGYRHSPELYNLMVDILGKCRSFDSMSELVEEMARLEGY-VTLETMTKVMR 204
Query: 177 RFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPN 236
R + A + EDA+ F + FG++K+T +N+L+D L K VE A V LE K IP +
Sbjct: 205 RLARARKHEDAIEAFGRMEKFGVKKDTAALNVLIDALVKGDSVEHAHKVVLEFKGSIPLS 264
Query: 237 AHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLD 296
+ +FN+ +HGWC+ D A+ +++MK HG P V SY+ I++Y + +F KV ++L+
Sbjct: 265 SRSFNVLMHGWCRARDFDNARKAMEDMKEHGFEPDVFSYTNFIEAYGHERDFRKVDQVLE 324
Query: 297 EMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRAS 356
EM+ GCPPN VTYT+VM +L K+G +A+ + EKMK G D+ F++ +I+ LG+A
Sbjct: 325 EMRENGCPPNAVTYTSVMLHLGKAGQLRKALEVYEKMKSDGCVADTPFYSSMIFILGKAG 384
Query: 357 RVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQT 416
R+++A V++ +MP+ GV D T+N+MI+ H E A +L+EM CKPNV T
Sbjct: 385 RLKDACDVFE-DMPKQGVVRDVVTYNSMISTACAHSREETALRLLKEMED-GSCKPNVGT 442
Query: 417 FHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKE 476
+H LLK C K + L LLD M K+++S D+ TY+L+++ L ++ K E AY +E
Sbjct: 443 YHRLLKMC-CKKKRMKVLKFLLDHMF-KNNISPDLATYSLLVNALRKSGKVEDAYSFLEE 500
Query: 477 MIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
M+ TP+ T + + E++ K M + ++E M +
Sbjct: 501 MVLRGFTPKPSTLKKLAGELESKSMLEEKVRVEEWMDRF 539
>gi|357480939|ref|XP_003610755.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512090|gb|AES93713.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 596
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 179/437 (40%), Positives = 266/437 (60%), Gaps = 11/437 (2%)
Query: 78 SSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIY 137
SS D V Q+L + + S+ LV +++ RF +DW +A G F WA Y HS E+Y
Sbjct: 159 SSHDHVVQALDG----SGFRVSNSLVMQVLKRFGNDWVAAYGFFIWAKKQTPYVHSPEVY 214
Query: 138 EMMVDILGKVRQMDQMRALLEEMSK--GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
+MVDILGK ++ D M L++EM + G+ V L+T++KVMRRF+ A + EDAV F +G
Sbjct: 215 NLMVDILGKAKEFDLMWKLVKEMKRIEGY-VCLDTMSKVMRRFAKAQRHEDAVEAFRGMG 273
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDE 255
+G+EK+T +N LLD L K +E+A +V E KS +P ++ +FNI I+GWCK+ ++
Sbjct: 274 KYGVEKDTAALNKLLDALVKGQSIEIAHNVLDEFKSSVPLSSPSFNILINGWCKVRNFEK 333
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
A+ ++E K HG P V +Y+ I+SYC +F KV E+L+EM+ GCPPN VTYT ++
Sbjct: 334 ARKVMEERKEHGFEPDVFTYNNFIESYCHDKDFRKVDEVLEEMRGNGCPPNAVTYTILLL 393
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
K+G +A+ E+MK G PD+ F++ L+Y LG+A R+++A V+ +MP+ GV
Sbjct: 394 GYGKAGQLSKALEEYERMKKDGIVPDTPFYSSLMYILGKAGRLKDACEVFD-DMPKQGVV 452
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS 435
D T+NTMI+ H E A +L+EM + CKP++QT+HPLLK C K + L
Sbjct: 453 RDVVTYNTMISTACAHSKEETALRLLKEMEETS-CKPDLQTYHPLLKMC-CKKKRMKVLK 510
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE 495
LLD M KH L D TYTL++ L + K A F+EM+ TP T +L+ +
Sbjct: 511 FLLDHMF-KHDLCPDRGTYTLLVQSLSNSGKLVEACTFFEEMVSKGFTPMETTVKLLTRK 569
Query: 496 VKQKHMYDAAEKIEAVM 512
++ K M ++IE +M
Sbjct: 570 LEIKSMLKEKDQIEELM 586
>gi|15228825|ref|NP_188906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274241|sp|Q9LUJ4.1|PP248_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22670, mitochondrial; Flags: Precursor
gi|9279685|dbj|BAB01242.1| unnamed protein product [Arabidopsis thaliana]
gi|332643142|gb|AEE76663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 562
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 176/442 (39%), Positives = 274/442 (61%), Gaps = 13/442 (2%)
Query: 78 SSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIY 137
+S ++V + L + C+ + + LV +++ RF + W A G F WA S GY HS Y
Sbjct: 114 TSHEDVVKELSK---CDVV-VTESLVLQVLRRFSNGWNQAYGFFIWANSQTGYVHSGHTY 169
Query: 138 EMMVDILGKVRQMDQMRALLEEMSKGH---IVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
MVD+LGK R D M L+ EM+K +VTL+T++KVMRR + +G++ AV F E+
Sbjct: 170 NAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEM 229
Query: 195 -GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRV 253
++G++ +T MN L+D L KE +E A VFL+L I P+A TFNI IHG+CK +
Sbjct: 230 EKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPDARTFNILIHGFCKARKF 289
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
D+A+ + MK P V++Y++ +++YC++ +F +V E+L+EM+ GC PNVVTYT V
Sbjct: 290 DDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIV 349
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
M L KS EA+ + EKMK G PD++F++ LI+ L + R ++A +++ +M G
Sbjct: 350 MHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFE-DMTNQG 408
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEM--NKLEHCKPNVQTFHPLLKSCFKTGKTD 431
V D +NTMI+ HH E A +L+ M + E C PNV+T+ PLLK C K
Sbjct: 409 VRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKM- 467
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRL 491
+ L LL MV K+ +S+D++TY L+I GLC + K E A L F+E + + PR TC++
Sbjct: 468 KLLGILLHHMV-KNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKM 526
Query: 492 ILDEVKQKHMYDAAEKIEAVMK 513
++DE+++K+M +A KI+++++
Sbjct: 527 LVDELEKKNMAEAKLKIQSLVQ 548
>gi|224107985|ref|XP_002314678.1| predicted protein [Populus trichocarpa]
gi|222863718|gb|EEF00849.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 175/437 (40%), Positives = 270/437 (61%), Gaps = 11/437 (2%)
Query: 78 SSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIY 137
SSE V ++L + + I ++ LV++++ RF A G+F WA + Y H+ E+Y
Sbjct: 70 SSEAAVVKALNE----SGIDATNELVSQILMRFDSHCVVAFGVFIWAKNQTSYVHTPELY 125
Query: 138 EMMVDILGKVRQMDQMRALLEEMSKG--HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
+ M+DILGK ++ M +L+E+M KG V+L T +KVMRR + A +++DA+ F +
Sbjct: 126 DYMIDILGKFKKFSLMWSLVEQM-KGLNGYVSLATASKVMRRLAKARKYKDAIDVFRGIE 184
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDE 255
+G K+ E +N+L+D L KEG VE A S FLE K CI ++ +FNI IHG+CK
Sbjct: 185 KYGASKDREALNVLMDALVKEGDVEDAHSAFLEFKDCITLDSSSFNILIHGYCKARMFVV 244
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
A+ ++EM+ HG HP V+SYS I +YC Q +F V + DEMQ +GC PNV+TYTTVM
Sbjct: 245 ARKIMEEMEKHGFHPDVVSYSCFIAAYCEQKDFRNVEAVFDEMQEKGCKPNVITYTTVMH 304
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
L K+ EA+ + EKMK G PDS+F++ LIY L ++ R+++A V++ +M + GV
Sbjct: 305 ALGKARQLNEALEVYEKMKRNGCLPDSKFYSSLIYVLSQSGRIKDAWDVFE-DMEKQGVC 363
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS 435
+ +NTMI+ H A +LE M + CKP+V+T+ PLLK C + K+ + L
Sbjct: 364 RNLWVYNTMISSACAHSQGGSALKLLERMEG-DSCKPDVKTYAPLLKMCCRR-KSIKLLK 421
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE 495
LL M K+++S+D+ TYTL+++ CR K E A F+E + + P +T + +++E
Sbjct: 422 FLLSHMF-KNNVSVDLGTYTLLVNEFCRNGKLEHACFYFQEAVLKGMVPMVKTFKALVEE 480
Query: 496 VKQKHMYDAAEKIEAVM 512
++QK+M + EKIE +M
Sbjct: 481 LEQKNMKEMKEKIEKLM 497
>gi|255552099|ref|XP_002517094.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543729|gb|EEF45257.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 549
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 173/454 (38%), Positives = 282/454 (62%), Gaps = 14/454 (3%)
Query: 63 RLPDIDVI--ISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGI 120
++ DID + I K H + D V Q+L C + P++ L+++L++RF +DW ALG+
Sbjct: 97 QVSDIDRVSEILKKHYPCT-DSVVQALND---C-GVNPTNNLISQLLNRFCNDWVPALGL 151
Query: 121 FRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS--KGHIVTLNTIAKVMRRF 178
F WA GY H ++Y++MVDILG+ ++ M L++EM +G+ V+L T+ KVMRR
Sbjct: 152 FTWAKHQTGYVHPPDLYDLMVDILGRRKKFSFMWELVKEMENLEGY-VSLVTMKKVMRRL 210
Query: 179 SGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAH 238
+ AG ++DAV F + G+ K+ E +N+L+D L KEG VE A S F+E K I +
Sbjct: 211 ARAGNFQDAVEAFRGIEKLGVRKDIEALNVLMDALVKEGSVEHAYSAFMEFKDSIHVDFQ 270
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
+FNI +HG+CK ++D+A+ + EM G P V+SY+ I+ YC+ +F V + EM
Sbjct: 271 SFNILLHGYCKARKLDDARKIMDEMDKQGFQPNVVSYTCFIELYCKLKDFRNVEAIFSEM 330
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRV 358
Q + C PNV+TYT M L K+ +A+ + E MK PD+ F++ LI+ L ++ R+
Sbjct: 331 QEKSCKPNVITYTIFMHALGKAKQVNKALEVYEMMKSNCCVPDASFYSSLIFVLTQSGRL 390
Query: 359 QEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFH 418
++A V++ +M + GV+PD T+NTMIT H E A +L M + + CKP++QT+
Sbjct: 391 KDAWDVFE-DMKKQGVSPDLLTYNTMITSACTHLEEENALKLLRRMEE-DSCKPDIQTYA 448
Query: 419 PLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
PLLK C + + + L LL+ M K+++S+D+ TY L++ GLC++ K E A F+EM+
Sbjct: 449 PLLKMCCRKKRI-KVLKFLLNHMF-KNNISIDLGTYVLLVGGLCKSGKLELACSFFEEMV 506
Query: 479 GHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
+ PR +T +++++E++Q ++ +A EKI+ +M
Sbjct: 507 MKGLIPRDRTYKMLVEELEQNNLTEAKEKIQKLM 540
Score = 45.1 bits (105), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 92/239 (38%), Gaps = 40/239 (16%)
Query: 275 YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
Y ++ R+ FS ++EL+ EM+ ++VT VM LA++G+F
Sbjct: 168 YDLMVDILGRRKKFSFMWELVKEMENLEGYVSLVTMKKVMRRLARAGNF----------- 216
Query: 335 IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHH 394
Q+AV ++ + + GV D N ++ G
Sbjct: 217 ------------------------QDAVEAFR-GIEKLGVRKDIEALNVLMDALVKEGSV 251
Query: 395 EKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTY 454
E A+ E H + Q+F+ LL K K D+ +++D+M +K ++ +Y
Sbjct: 252 EHAYSAFMEFKDSIHV--DFQSFNILLHGYCKARKLDDA-RKIMDEM-DKQGFQPNVVSY 307
Query: 455 TLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
T I C+ +F EM P T + + + + + A ++ +MK
Sbjct: 308 TCFIELYCKLKDFRNVEAIFSEMQEKSCKPNVITYTIFMHALGKAKQVNKALEVYEMMK 366
>gi|449442128|ref|XP_004138834.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Cucumis sativus]
Length = 591
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 163/419 (38%), Positives = 257/419 (61%), Gaps = 5/419 (1%)
Query: 95 AIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMR 154
A + S+ LV +L+ RF +DW A GIF+WA Y HS E Y MVDILGK + M
Sbjct: 168 AYRVSNTLVAQLLKRFHNDWIQAYGIFKWAKDQIPYRHSPESYNSMVDILGKAKNFRLMW 227
Query: 155 ALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTL 213
L++EM+ V+L T++KV+RR + AG+ ++A+ F + +G+ +T MN+L+D L
Sbjct: 228 ELVDEMNHLAGSVSLETMSKVIRRLARAGRHQEAIHAFRNIEKYGISTDTTAMNVLMDAL 287
Query: 214 CKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI 273
KE VE A +VF ELK IP N +FN+ IHG+CK ++DEA + E++ G P VI
Sbjct: 288 VKEASVEDAHNVFRELKCSIPFNLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPDVI 347
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
SY+ I+++CR+ +F V ++L +M+ +GC PNV+T+T +M L K+ EA+++ EKM
Sbjct: 348 SYTAFIEAHCREKDFRNVDKVLVQMEHKGCKPNVITFTIIMHALGKAKQINEALKVYEKM 407
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
K G PDS F++ LI+ LG+A R+ + + + +M + GV PD T+NT+I+ H
Sbjct: 408 KKEGCVPDSSFYSSLIFILGKAGRLTDVKEIVE-DMEKQGVTPDVLTYNTLISCACAHSQ 466
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
E A +L +M ++ CKP+++T+HPLLK F K + L LLD M K+ +S++ T
Sbjct: 467 EETALTLLLKMEEVS-CKPDLKTYHPLLK-MFCRKKRMKVLKFLLDHMF-KNDVSIEAGT 523
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
Y +++ GLC K A F EM+ + P+ T +++ +E+++K M + + IE +M
Sbjct: 524 YAILVRGLCENGKLHLACSFFGEMLSKAMVPKDSTFKMLKEELERKSMLEEMKIIENLM 582
>gi|449505568|ref|XP_004162510.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Cucumis sativus]
Length = 614
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 163/419 (38%), Positives = 257/419 (61%), Gaps = 5/419 (1%)
Query: 95 AIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMR 154
A + S+ LV +L+ RF +DW A GIF+WA Y HS E Y MVDILGK + M
Sbjct: 191 AYRVSNTLVAQLLKRFHNDWIQAYGIFKWAKDQIPYRHSPESYNSMVDILGKAKNFRLMW 250
Query: 155 ALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTL 213
L++EM+ V+L T++KV+RR + AG+ ++A+ F + +G+ +T MN+L+D L
Sbjct: 251 ELVDEMNHLAGSVSLETMSKVIRRLARAGRHQEAIHAFRNIEKYGISTDTTAMNVLMDAL 310
Query: 214 CKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI 273
KE VE A +VF ELK IP N +FN+ IHG+CK ++DEA + E++ G P VI
Sbjct: 311 VKEASVEDAHNVFRELKCSIPFNLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPDVI 370
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
SY+ I+++CR+ +F V ++L +M+ +GC PNV+T+T +M L K+ EA+++ EKM
Sbjct: 371 SYTAFIEAHCREKDFRNVDKVLVQMEHKGCKPNVITFTIIMHALGKAKQINEALKVYEKM 430
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
K G PDS F++ LI+ LG+A R+ + + + +M + GV PD T+NT+I+ H
Sbjct: 431 KKEGCVPDSSFYSSLIFILGKAGRLTDVKEIVE-DMEKQGVTPDVLTYNTLISCACAHSQ 489
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
E A +L +M ++ CKP+++T+HPLLK F K + L LLD M K+ +S++ T
Sbjct: 490 EETALTLLLKMEEVS-CKPDLKTYHPLLK-MFCRKKRMKVLKFLLDHMF-KNDVSIEAGT 546
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
Y +++ GLC K A F EM+ + P+ T +++ +E+++K M + + IE +M
Sbjct: 547 YAILVRGLCENGKLHLACSFFGEMLSKAMVPKDSTFKMLKEELERKSMLEEMKIIENLM 605
>gi|224107983|ref|XP_002314677.1| predicted protein [Populus trichocarpa]
gi|222863717|gb|EEF00848.1| predicted protein [Populus trichocarpa]
Length = 481
Score = 304 bits (778), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 167/477 (35%), Positives = 287/477 (60%), Gaps = 13/477 (2%)
Query: 39 SPIESYCSDGARLDHHQVLCVDSPRLPDIDVI--ISKVHVGSSEDEVFQSLKQDHVCNAI 96
SP+ ++ D L++ + + +S DID + I K H SED V ++L + + I
Sbjct: 8 SPLANWV-DNPTLENFKSIAAESGTGGDIDKVKGILKRHF-PSEDAVVKALDE----SGI 61
Query: 97 QPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRAL 156
++ LV++L+ RF + W +ALG+F WA + GY H+ +Y+++VDILGK ++ M +
Sbjct: 62 NATNDLVSQLLERFSNQWITALGVFIWAKNQTGYVHTPRLYDLVVDILGKCKKFGIMWKV 121
Query: 157 LEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK 215
+ EM++ V+ +T++ V+RR + +G ++D + L + ++K+T +N+++ L K
Sbjct: 122 VNEMNELNGQVSFSTMSIVVRRLASSGMYKDVIDVLRGLEKYRVKKDTVALNMVMHALAK 181
Query: 216 EGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISY 275
+G + A SVFLE K I ++H+FNI IHG+C+ +D+A+ T++EM+ HG P SY
Sbjct: 182 QGGAKDAYSVFLEFKDSITLDSHSFNILIHGYCEARMLDDARKTMEEMEKHGFRPDASSY 241
Query: 276 STIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKI 335
+ I++YC+Q +F V +L+EM +GC P+V+ Y+ + L K+ EA+ + EKM
Sbjct: 242 TCFIKAYCKQKDFRNVEVILNEMGEKGCEPDVIAYSIYIRALGKARKINEALEVYEKMNK 301
Query: 336 VGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHE 395
KPD++FF+ LIY LGR+ R+ +A YV++ +M +GV+ D T+N MI +
Sbjct: 302 NSCKPDAKFFSTLIYVLGRSGRLNDAWYVFE-DMENHGVSRDLWTYNAMIYHACANRQGN 360
Query: 396 KAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYT 455
A +LE M ++ CKP+++T+ PLLK C K K + L LL M N +++ +D++TY
Sbjct: 361 SALKLLERM-EVNSCKPDLETYQPLLKMCCKM-KDMKVLKFLLSHMFN-NNVRIDLSTYA 417
Query: 456 LVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
L+I L + K E A F++ + + I P+ +T ++L E+ Q +M + KIE +M
Sbjct: 418 LLIRELAESGKLEHACFFFQDAVLNGIVPKDRTYEILLKELGQNNMVEMKGKIEKLM 474
>gi|224107981|ref|XP_002314676.1| predicted protein [Populus trichocarpa]
gi|222863716|gb|EEF00847.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 160/435 (36%), Positives = 266/435 (61%), Gaps = 9/435 (2%)
Query: 79 SEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYE 138
SED V ++L + + I +H LV++L+ RF + W ALG+F WA + GY H EIY
Sbjct: 120 SEDAVVEALNE----SGISATHDLVSQLLKRFSNQWLIALGVFIWAKNQTGYVHKPEIYN 175
Query: 139 MMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTF 197
M+DILGK R+ M L++EMS V+L T+ KVM+R G++ +A+ F L F
Sbjct: 176 SMIDILGKSRKFSLMWDLVQEMSGLNGYVSLVTMGKVMKRLVRDGKYNEAIDAFRGLEKF 235
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQ 257
GL K+TE MN+L+D L + G+VE AR+V LE + C+ + ++NI G+CK +A+
Sbjct: 236 GLSKSTEAMNVLMDILARNGRVEDARAVALEFEGCLTLDYRSYNILSSGYCKARMFGDAR 295
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
T++EM+ G HP V+SY+ I++Y Q +F V +L+EMQ +GCPP+++TYT + L
Sbjct: 296 KTMEEMEERGFHPNVVSYTAFIEAYGEQKDFRNVEIILNEMQEKGCPPDLITYTVYIRAL 355
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
K+ +A+ I E++K G ++F+ LI++L + R+++A +++ ++ + GV D
Sbjct: 356 GKARQINKALEICEEIKRNGFVLGTQFYCSLIHSLCLSGRLKDAWNIFE-DVEKQGVGRD 414
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
+ MI+ E A +L +M + + CKP+VQT+ PLLK C + K+ + L L
Sbjct: 415 LGMYKAMISAACALSQDESALKLLHKMEE-DSCKPDVQTYAPLLKMCCRK-KSMKMLKFL 472
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVK 497
L+ M ++ +S+DI TY L++HGL + K ++A F+E + + P +T +++L+E++
Sbjct: 473 LNHMF-ENDVSIDIVTYDLLVHGLRKQGKLKYACFFFQEAVLKGMVPCDKTYKILLEELE 531
Query: 498 QKHMYDAAEKIEAVM 512
+K+M + KIE +M
Sbjct: 532 RKNMAEMKGKIEKLM 546
>gi|124365553|gb|ABN09787.1| Pentatricopeptide repeat [Medicago truncatula]
Length = 200
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 108/192 (56%), Positives = 153/192 (79%), Gaps = 1/192 (0%)
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
PPNVVTYTT+M LAK+ F+EA+++ E+M VG +PD+ FFN IYT+GRA R+ +A +
Sbjct: 9 PPNVVTYTTIMCALAKAEKFDEALQVVERMNAVGCRPDTLFFNSFIYTMGRAGRIDDATH 68
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQT-FHPLLK 422
+++V MP+ VAP+TST+N+MI+MF ++ E+AF +L+EM K CKP++QT +HPL+K
Sbjct: 69 IFKVAMPKASVAPNTSTYNSMISMFCYYAQKERAFDILKEMEKSGLCKPDIQTYYHPLIK 128
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
SCFK K D L+ +L DMVNK+H+ LD++TYTL+IHGLCRA++C+WA+ LF+EM+ DI
Sbjct: 129 SCFKMRKVDTWLNDILSDMVNKYHIGLDLSTYTLLIHGLCRADRCKWAFNLFEEMVDQDI 188
Query: 483 TPRYQTCRLILD 494
PRY+TCRL+LD
Sbjct: 189 MPRYKTCRLLLD 200
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 73/175 (41%), Gaps = 4/175 (2%)
Query: 234 PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
PPN T+ + K + DEA ++ M GC P + +++ I + R
Sbjct: 9 PPNVVTYTTIMCALAKAEKFDEALQVVERMNAVGCRPDTLFFNSFIYTMGRAGRIDDATH 68
Query: 294 LLD-EMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG-SKPDSR-FFNCLIY 350
+ M PN TY +++S E A I ++M+ G KPD + +++ LI
Sbjct: 69 IFKVAMPKASVAPNTSTYNSMISMFCYYAQKERAFDILKEMEKSGLCKPDIQTYYHPLIK 128
Query: 351 TLGRASRVQEAVYVYQVEMPENG-VAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
+ + +V + +M + D ST+ +I + AF++ EEM
Sbjct: 129 SCFKMRKVDTWLNDILSDMVNKYHIGLDLSTYTLLIHGLCRADRCKWAFNLFEEM 183
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 87/183 (47%), Gaps = 13/183 (7%)
Query: 159 EMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
+++ ++VT TI M + A ++++A++ + + G +T N + T+ + G+
Sbjct: 6 KIAPPNVVTYTTI---MCALAKAEKFDEALQVVERMNAVGCRPDTLFFNSFIYTMGRAGR 62
Query: 219 VELARSVF--LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG-CHPCVISY 275
++ A +F K+ + PN T+N I +C + + A ++EM+ G C P + +Y
Sbjct: 63 IDDATHIFKVAMPKASVAPNTSTYNSMISMFCYYAQKERAFDILKEMEKSGLCKPDIQTY 122
Query: 276 STIIQSYCRQYNFSKVYELLDEMQAQGCPP-----NVVTYTTVMSYLAKSGDFEEAIRIT 330
+ C + KV L+++ + ++ TYT ++ L ++ + A +
Sbjct: 123 YHPLIKSC--FKMRKVDTWLNDILSDMVNKYHIGLDLSTYTLLIHGLCRADRCKWAFNLF 180
Query: 331 EKM 333
E+M
Sbjct: 181 EEM 183
>gi|147815181|emb|CAN63349.1| hypothetical protein VITISV_024448 [Vitis vinifera]
Length = 324
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 112/183 (61%), Positives = 147/183 (80%), Gaps = 1/183 (0%)
Query: 333 MKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
M+ VG KPD+ F+N LI+TLGRA +++EAV+V++VEMP+ GV P+TST+N+MI MF HH
Sbjct: 1 MRSVGCKPDTLFYNALIHTLGRAGQLREAVHVFEVEMPKTGVPPNTSTYNSMIAMFCHHS 60
Query: 393 HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
+KA ++L E+ CKP++QT++P+LKSCFKTGK D LS LDDMVNKHHLSLD++
Sbjct: 61 QEQKALNLLREIENSTFCKPDIQTYYPVLKSCFKTGKIDS-LSNFLDDMVNKHHLSLDVS 119
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
YTL+IHGLC ANKCE Y LF+EM+ ITPRY+TC L+LDE+KQK+M+DAAE IE M
Sbjct: 120 AYTLLIHGLCXANKCEXGYNLFEEMVXKAITPRYKTCALLLDEIKQKNMHDAAEGIEVFM 179
Query: 513 KKL 515
K++
Sbjct: 180 KQM 182
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 92/205 (44%), Gaps = 11/205 (5%)
Query: 194 LGTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LEL-KSCIPPNAHTFNIFIHGWCKIN 251
+ + G + +T N L+ TL + G++ A VF +E+ K+ +PPN T+N I +C +
Sbjct: 1 MRSVGCKPDTLFYNALIHTLGRAGQLREAVHVFEVEMPKTGVPPNTSTYNSMIAMFCHHS 60
Query: 252 RVDEAQWTIQEMKGHG-CHPCVISYSTIIQSYCRQYNFSKVYELLDEM-QAQGCPPNVVT 309
+ +A ++E++ C P + +Y +++S + + LD+M +V
Sbjct: 61 QEQKALNLLREIENSTFCKPDIQTYYPVLKSCFKTGKIDSLSNFLDDMVNKHHLSLDVSA 120
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR--VQEAVYVYQV 367
YT ++ L + E + E+M P + L+ + + + E + V+
Sbjct: 121 YTLLIHGLCXANKCEXGYNLFEEMVXKAITPRYKTCALLLDEIKQKNMHDAAEGIEVFMK 180
Query: 368 EMPENGVAPDTSTF-----NTMITM 387
+M + STF T+IT+
Sbjct: 181 QMKTSDALVLKSTFRYENKGTLITV 205
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/144 (18%), Positives = 63/144 (43%), Gaps = 2/144 (1%)
Query: 263 MKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLD-EMQAQGCPPNVVTYTTVMSYLAKSG 321
M+ GC P + Y+ +I + R + + + EM G PPN TY ++++
Sbjct: 1 MRSVGCKPDTLFYNALIHTLGRAGQLREAVHVFEVEMPKTGVPPNTSTYNSMIAMFCHHS 60
Query: 322 DFEEAIRITEKMK-IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTST 380
++A+ + +++ KPD + + ++ + + ++ + ++ ++ D S
Sbjct: 61 QEQKALNLLREIENSTFCKPDIQTYYPVLKSCFKTGKIDSLSNFLDDMVNKHHLSLDVSA 120
Query: 381 FNTMITMFSHHGHHEKAFHVLEEM 404
+ +I E +++ EEM
Sbjct: 121 YTLLIHGLCXANKCEXGYNLFEEM 144
>gi|225430190|ref|XP_002282419.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial [Vitis vinifera]
gi|296081989|emb|CBI20994.3| unnamed protein product [Vitis vinifera]
Length = 597
Score = 201 bits (511), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 218/425 (51%), Gaps = 15/425 (3%)
Query: 95 AIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMR 154
I+P L+ + F K +FRWA PG+E S ++ M+D+L K R D
Sbjct: 98 GIKPCSGLLQAIFSHFDASPKPLFTLFRWAMKQPGFESSMTLFNSMIDVLAKSRAFDSAW 157
Query: 155 ALLEEMSKG----HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTET----M 206
L+ + +G +V+ NT A ++RR++ AG A+RTF+ + ++ ++
Sbjct: 158 LLVLDRIEGGEEPELVSSNTFAVLIRRYARAGMTLSAIRTFEFAFSLDSIRDRDSEWSLF 217
Query: 207 NLLLDTLCKEGKVELARSVFLELKSCIP---PNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
+LLD+LCKEG V +A F + + P P+ +N+ ++GW + ++ A+ + M
Sbjct: 218 KILLDSLCKEGHVRVASEYFDQQRGLDPSWVPSIRVYNVLLNGWFRSRKLKRAEQLWRTM 277
Query: 264 KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF 323
K P V++Y T+++ YCR K EL+ EM+ +G PNV+ Y ++ LA++G F
Sbjct: 278 KRENVKPTVVTYGTLVEGYCRMRRSEKAIELVGEMRGKGIEPNVIVYNPIIDSLAEAGRF 337
Query: 324 EEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNT 383
+EA+ + E+ + + P +N L+ +A + A V ++ M G P +T+N
Sbjct: 338 KEAMGMMERCLVSETGPTISTYNSLVKGFCKAGDLVGASKVLKM-MISRGFDPTLTTYNY 396
Query: 384 MITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVN 443
FS G E+ ++ +M + H P+ T+H L+K + + D L+ + +
Sbjct: 397 FFRYFSRCGKTEEGMNLYTKMIESGHT-PDRLTYHLLIKMMCEEERLD--LAVQVSKEMR 453
Query: 444 KHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYD 503
LD+ T T+++H LC+ ++ E A+ F++MI I P+Y T + + ++++ + +
Sbjct: 454 ARGCDLDLATSTMLVHLLCKMHRLEEAFAEFEDMIRRGIVPQYLTFERMNNALRKRGLTE 513
Query: 504 AAEKI 508
A K+
Sbjct: 514 MARKL 518
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 106/242 (43%), Gaps = 5/242 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEE-MSKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G E + +Y ++D L + + + ++E + T++T +++ F AG A
Sbjct: 316 GIEPNVIVYNPIIDSLAEAGRFKEAMGMMERCLVSETGPTISTYNSLVKGFCKAGDLVGA 375
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHG 246
+ + + G + T N + GK E +++ ++ +S P+ T+++ I
Sbjct: 376 SKVLKMMISRGFDPTLTTYNYFFRYFSRCGKTEEGMNLYTKMIESGHTPDRLTYHLLIKM 435
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C+ R+D A +EM+ GC + + + ++ C+ + + + ++M +G P
Sbjct: 436 MCEEERLDLAVQVSKEMRARGCDLDLATSTMLVHLLCKMHRLEEAFAEFEDMIRRGIVPQ 495
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
+T+ + + L K G E A ++ + M S P S G ASR ++ + +
Sbjct: 496 YLTFERMNNALRKRGLTEMARKLCDMM---ASVPHSSKLPNTYSGDGDASRARKTSIIQR 552
Query: 367 VE 368
E
Sbjct: 553 AE 554
>gi|224077524|ref|XP_002305285.1| predicted protein [Populus trichocarpa]
gi|222848249|gb|EEE85796.1| predicted protein [Populus trichocarpa]
Length = 523
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 122/418 (29%), Positives = 215/418 (51%), Gaps = 11/418 (2%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS 161
LV +++ R K+ SA F WA PG+EHS E Y ++V+ILG RQ + L EM
Sbjct: 80 LVEQVLKRCKNLGFSAHRFFLWAKRIPGFEHSEESYHILVNILGTSRQFAILWDFLIEMR 139
Query: 162 KGHIVTLN--TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV 219
+ H +N I V R +S A DA+R FD + FGL + + ++ LL LCK V
Sbjct: 140 ESHDFEINQEIIWLVFRSYSRANLPSDAIRAFDRMAEFGLRPSVDDLDKLLYVLCKCKHV 199
Query: 220 ELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
+ A+ F +K A T++I + GW I EA+ EM+G GC V++Y++++
Sbjct: 200 KCAQQFFDRVKHKFEAKAKTYSILVRGWGDIGEAVEARKVFDEMRGRGCALDVLAYNSLL 259
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
++ C+ N + Y++ E+ + G P+ +Y + ++ + + ++MK
Sbjct: 260 EALCKGGNVDEAYKMFREIGSHGVEPDACSYAIFIRAYCEANNIHSVFSVLDRMKRYDLV 319
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQV--EMPENGVAPDTSTFNTMITMFSHHGHHEKA 397
P+ +NC+I L + +V++A YQ+ EM E GV+PD ++NT++ H +A
Sbjct: 320 PNVFTYNCIIKKLCKNGKVEDA---YQLLHEMMERGVSPDAWSYNTILAYHCEHSEVNRA 376
Query: 398 FHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLV 457
++ M K ++C P+ +++ LLK + G+ D +++ + M + ++TY+++
Sbjct: 377 TKLISIMVK-DNCLPDRHSYNMLLKLLVRVGRFDRA-TEIWESM-GERGFYPSVSTYSVM 433
Query: 458 IHGLC-RANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
IHGLC + K E A F+ MI I P T ++ + + + D E + M++
Sbjct: 434 IHGLCKKKGKLEEACRYFETMIDEGIPPYASTIEMLRNRLIGFGLLDHIEILACKMER 491
>gi|255548471|ref|XP_002515292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545772|gb|EEF47276.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 200/384 (52%), Gaps = 4/384 (1%)
Query: 95 AIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMR 154
I SH LV ++ RF K A F WAG G+EH S Y M+ IL K RQ + +
Sbjct: 90 GINLSHDLVIDVLERFCHARKPAFRFFCWAGEKQGFEHDSRTYNSMMSILAKTRQFETVV 149
Query: 155 ALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLC 214
++LEEM ++T++T + MR F+ A + + AV F+ + + + ET+N LLD+L
Sbjct: 150 SMLEEMGGKGVLTMDTFSIAMRAFAAAKERKKAVAMFELMKKYNYKVGVETINHLLDSLG 209
Query: 215 KEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVIS 274
+ + A+++F LK PN T+ + ++GWCK+ + EA EM G P +++
Sbjct: 210 RAKLGKEAQALFENLKGRFTPNLRTYTVLLNGWCKVKNLMEAGSVWNEMIDKGFKPDIVA 269
Query: 275 YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
++ +++ R S +L M+A+G P+V +YT ++ YL + EEA+ ++M
Sbjct: 270 HNIMLEGLLRSKQRSDAIKLFMVMKAKGPSPDVRSYTILIRYLCRQSKMEEAVEYFQEMI 329
Query: 335 IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHH 394
G KPD+ + CLI G R+ + VY EM E G PD T+N +I + +
Sbjct: 330 DSGCKPDAAVYTCLITGFGNRKRM-DMVYDLLKEMKEEGCPPDGLTYNALIKLMTRLKMP 388
Query: 395 EKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTY 454
+ A + ++M + +P + T++ ++KS F+T + + + + D +++ D +Y
Sbjct: 389 DDAARIYKKMTQ-SGIEPTIHTYNMIMKSYFQTRNYE--MGRAVWDEMSRKGFCPDDNSY 445
Query: 455 TLVIHGLCRANKCEWAYLLFKEMI 478
T++I GL + A +EM+
Sbjct: 446 TVLIGGLISQGRSGEACKYLEEML 469
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 121/273 (44%), Gaps = 13/273 (4%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKG---HIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++++ KV+ + + ++ EM KG IV N + + + R + Q DA++ F
Sbjct: 235 YTVLLNGWCKVKNLMEAGSVWNEMIDKGFKPDIVAHNIMLEGLLR---SKQRSDAIKLFM 291
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKIN 251
+ G + + +L+ LC++ K+E A F E+ S P+A + I G+
Sbjct: 292 VMKAKGPSPDVRSYTILIRYLCRQSKMEEAVEYFQEMIDSGCKPDAAVYTCLITGFGNRK 351
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
R+D ++EMK GC P ++Y+ +I+ R + +M G P + TY
Sbjct: 352 RMDMVYDLLKEMKEEGCPPDGLTYNALIKLMTRLKMPDDAARIYKKMTQSGIEPTIHTYN 411
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
+M ++ ++E + ++M G PD + LI L R EA Y EM E
Sbjct: 412 MIMKSYFQTRNYEMGRAVWDEMSRKGFCPDDNSYTVLIGGLISQGRSGEACK-YLEEMLE 470
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
G+ +N S G+ + +LEE+
Sbjct: 471 KGMKAPQLDYNKFGADLSRGGNPD----ILEEL 499
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 137/358 (38%), Gaps = 45/358 (12%)
Query: 152 QMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG-TFGLEKNTETMNLLL 210
M A+L+E G ++ + + V+ RF A + A R F G G E ++ T N ++
Sbjct: 81 NMEAVLDEC--GINLSHDLVIDVLERFCHARK--PAFRFFCWAGEKQGFEHDSRTYNSMM 136
Query: 211 DTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHP 270
L K + E S+ E+ TF+I + + +A + MK +
Sbjct: 137 SILAKTRQFETVVSMLEEMGGKGVLTMDTFSIAMRAFAAAKERKKAVAMFELMKKYNYKV 196
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRIT 330
V + + ++ S R + L + ++ + PN+ TYT +++ K + EA +
Sbjct: 197 GVETINHLLDSLGRAKLGKEAQALFENLKGR-FTPNLRTYTVLLNGWCKVKNLMEAGSVW 255
Query: 331 EKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSH 390
+M G KPD N ++ L R+ + +A+ ++ V M G +PD ++ +I
Sbjct: 256 NEMIDKGFKPDIVAHNIMLEGLLRSKQRSDAIKLFMV-MKAKGPSPDVRSYTILIRYLCR 314
Query: 391 HGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLD 450
E+A +EM CKP D
Sbjct: 315 QSKMEEAVEYFQEMID-SGCKP-------------------------------------D 336
Query: 451 ITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
YT +I G + + Y L KEM P T ++ + + M D A +I
Sbjct: 337 AAVYTCLITGFGNRKRMDMVYDLLKEMKEEGCPPDGLTYNALIKLMTRLKMPDDAARI 394
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 10/179 (5%)
Query: 337 GSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEK 396
G + DSR +N ++ L + + + V + + EM GV TF+ + F+ +K
Sbjct: 124 GFEHDSRTYNSMMSILAKTRQFETVVSMLE-EMGGKGVLT-MDTFSIAMRAFAAAKERKK 181
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSC--FKTGKTDECLSQLLDDMVNKHHLSLDITTY 454
A + E M K + K V+T + LL S K GK + L + L K + ++ TY
Sbjct: 182 AVAMFELMKKYNY-KVGVETINHLLDSLGRAKLGKEAQALFENL-----KGRFTPNLRTY 235
Query: 455 TLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
T++++G C+ A ++ EMI P ++L+ + + A K+ VMK
Sbjct: 236 TVLLNGWCKVKNLMEAGSVWNEMIDKGFKPDIVAHNIMLEGLLRSKQRSDAIKLFMVMK 294
>gi|255551140|ref|XP_002516618.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544438|gb|EEF45959.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 577
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 122/424 (28%), Positives = 221/424 (52%), Gaps = 12/424 (2%)
Query: 95 AIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMR 154
I+P L+N + F K +F WA P +E S+ ++ +++ LGK+++ D
Sbjct: 84 GIKPETSLLNAVFDHFNSSPKLLHSLFVWADKQPEFESSTTLFNSVINALGKMKEFDSAW 143
Query: 155 ALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGT--FGLEKNTETM-NLLLD 211
L+ + + +V+ +T A ++RR++ AG + A+RTF+ + F + N + + +LLD
Sbjct: 144 CLV--LDRTGLVSSDTFAILIRRYTRAGMPQSAIRTFEYAISLDFICDYNCDALLEILLD 201
Query: 212 TLCKEGKVELARSVF---LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGC 268
+LCKEG V +A+ F +L SC P+ +NI ++GW + ++ A+ EMK +
Sbjct: 202 SLCKEGHVRVAKEYFDSRKQLDSCWIPHVRIYNIMLNGWFRSRKLKHAERLWLEMKKNNV 261
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
P V++Y T+++ YCR + EL+D M+ +G PN + Y ++ LA+ G F+E
Sbjct: 262 SPSVVTYGTLVEGYCRMRRVERAIELVDVMRKEGIEPNALVYNPIIDALAEEGRFKEVSG 321
Query: 329 ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF 388
+ E S P +N L+ +A A V ++ M G P +T+N F
Sbjct: 322 MMEYFLQSESGPTISTYNSLVKGYCKAKDPVGASKVLKM-MISRGFVPTPTTYNYFFRHF 380
Query: 389 SHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
S G E+ ++ +M + + P+ TFH LLK + + D L+ + +
Sbjct: 381 SKFGMIEEGMNLYTKMIESGYT-PDRLTFHLLLKMLCEEERLD--LAVQISKEMRSRGCD 437
Query: 449 LDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+D+ T T++IH CR ++ E A++ F++MI I P+Y T + + DE++++ M + A K+
Sbjct: 438 MDLATSTMLIHLFCRMHRFEEAFMEFEDMIQKGIVPQYLTFQRLNDELRKRGMVERARKL 497
Query: 509 EAVM 512
+M
Sbjct: 498 SDMM 501
>gi|356549210|ref|XP_003542990.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Glycine max]
Length = 648
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 119/384 (30%), Positives = 200/384 (52%), Gaps = 4/384 (1%)
Query: 95 AIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMR 154
++ SH LV ++ RFK K A F WAG PG+ H S Y M+ +LG+ RQ + M
Sbjct: 199 GVRLSHDLVVDVLQRFKHARKPAFRFFCWAGKRPGFAHDSRTYNFMMCVLGRTRQFETMV 258
Query: 155 ALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLC 214
A+LEEM + ++T+ T + ++ F+ A Q + AV FD + +G + + +N LLD+L
Sbjct: 259 AMLEEMGEKGLLTMETFSIAIKAFAEAKQRKKAVGIFDLMKKYGFKVGVDVINFLLDSLS 318
Query: 215 KEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVIS 274
+ A++VF +LK P+ T+ I + GWC++ + EA EM G +P V++
Sbjct: 319 TAKLGKEAQAVFEKLKDRFTPSLQTYTILLSGWCRLKNLLEAGRVWNEMIDRGFNPDVVA 378
Query: 275 YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
++ +++ + S +L + M+A+G PNV +YT ++ K EAI + M
Sbjct: 379 HNVMLEGLLKCKKKSDAIKLFEIMKAKGPSPNVRSYTIMIQDFCKQKLMGEAIEYFDVMV 438
Query: 335 IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHH 394
G +PD+ + CLI GR ++ + VY EM E G PD T+N +I + +
Sbjct: 439 DRGCQPDAALYTCLITGFGRQKKM-DMVYSLLKEMRERGCPPDGRTYNALIKLMTSQHMP 497
Query: 395 EKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTY 454
+ A + ++M + KP + T++ ++KS F T K E ++ D+M K D +Y
Sbjct: 498 DDAVRIYKKMIQ-SGIKPTIHTYNMIMKSYFVT-KNYEMGHEIWDEMHQKGCCP-DDNSY 554
Query: 455 TLVIHGLCRANKCEWAYLLFKEMI 478
+ I GL R ++ A +EM+
Sbjct: 555 IVYIGGLIRQDRSGEACKYLEEML 578
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 131/328 (39%), Gaps = 42/328 (12%)
Query: 115 KSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKV 174
K A+GIF G++ ++ ++D L + + +A+ E++ +L T +
Sbjct: 289 KKAVGIFDLMKKY-GFKVGVDVINFLLDSLSTAKLGKEAQAVFEKLKDRFTPSLQTYTIL 347
Query: 175 MRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIP 234
+ + +A R ++E+ G + N++L+ L K K A +F +K+ P
Sbjct: 348 LSGWCRLKNLLEAGRVWNEMIDRGFNPDVVAHNVMLEGLLKCKKKSDAIKLFEIMKAKGP 407
Query: 235 -PNAHTFNIFIHGWCK--------------INR---VDEAQWT----------------- 259
PN ++ I I +CK ++R D A +T
Sbjct: 408 SPNVRSYTIMIQDFCKQKLMGEAIEYFDVMVDRGCQPDAALYTCLITGFGRQKKMDMVYS 467
Query: 260 -IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLA 318
++EM+ GC P +Y+ +I+ Q+ + +M G P + TY +M
Sbjct: 468 LLKEMRERGCPPDGRTYNALIKLMTSQHMPDDAVRIYKKMIQSGIKPTIHTYNMIMKSYF 527
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDT 378
+ ++E I ++M G PD + I L R R EA Y EM E G+
Sbjct: 528 VTKNYEMGHEIWDEMHQKGCCPDDNSYIVYIGGLIRQDRSGEACK-YLEEMLEKGMKAPK 586
Query: 379 STFNTMITMFSHHGHHEKAFHVLEEMNK 406
+N + S G+ +LEE+ +
Sbjct: 587 LDYNKFASDISKTGNAV----ILEELAR 610
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 134/340 (39%), Gaps = 19/340 (5%)
Query: 185 EDAVRTFDELGTFGLEKNTETM----------NLLLDTLCKEGKVELARSVFLELKSCIP 234
E + DEL F L++N E + +L++D L + F P
Sbjct: 175 ERVCKVIDEL--FALDRNMEVVLDECGVRLSHDLVVDVLQRFKHARKPAFRFFCWAGKRP 232
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI--SYSTIIQSYCRQYNFSKVY 292
AH + C + R + + + ++ G + ++S I+++ K
Sbjct: 233 GFAHDSRTYNFMMCVLGRTRQFETMVAMLEEMGEKGLLTMETFSIAIKAFAEAKQRKKAV 292
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
+ D M+ G V ++ L+ + +EA + EK+K + P + + L+
Sbjct: 293 GIFDLMKKYGFKVGVDVINFLLDSLSTAKLGKEAQAVFEKLKDRFT-PSLQTYTILLSGW 351
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
R + EA V+ EM + G PD N M+ A + E M K + P
Sbjct: 352 CRLKNLLEAGRVWN-EMIDRGFNPDVVAHNVMLEGLLKCKKKSDAIKLFEIM-KAKGPSP 409
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
NV+++ +++ K E + + D MV++ D YT +I G R K + Y
Sbjct: 410 NVRSYTIMIQDFCKQKLMGEAI-EYFDVMVDRG-CQPDAALYTCLITGFGRQKKMDMVYS 467
Query: 473 LFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
L KEM P +T ++ + +HM D A +I M
Sbjct: 468 LLKEMRERGCPPDGRTYNALIKLMTSQHMPDDAVRIYKKM 507
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 80/184 (43%), Gaps = 14/184 (7%)
Query: 336 VGSKP----DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHH 391
G +P DSR +N ++ LGR + + V + + EM E G+ TF+ I F+
Sbjct: 228 AGKRPGFAHDSRTYNFMMCVLGRTRQFETMVAMLE-EMGEKGLL-TMETFSIAIKAFAEA 285
Query: 392 GHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS--CFKTGKTDECLSQLLDDMVNKHHLSL 449
+KA + + M K K V + LL S K GK + + + L D +
Sbjct: 286 KQRKKAVGIFDLMKKYGF-KVGVDVINFLLDSLSTAKLGKEAQAVFEKLKD-----RFTP 339
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIE 509
+ TYT+++ G CR A ++ EMI P ++L+ + + A K+
Sbjct: 340 SLQTYTILLSGWCRLKNLLEAGRVWNEMIDRGFNPDVVAHNVMLEGLLKCKKKSDAIKLF 399
Query: 510 AVMK 513
+MK
Sbjct: 400 EIMK 403
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 80/210 (38%), Gaps = 35/210 (16%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G + + +Y ++ G+ ++MD + +LL+EM +G T +++ + +DA
Sbjct: 441 GCQPDAALYTCLITGFGRQKKMDMVYSLLKEMRERGCPPDGRTYNALIKLMTSQHMPDDA 500
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGW 247
VR + ++ ++S I P HT+N+ + +
Sbjct: 501 VRIYKKM----------------------------------IQSGIKPTIHTYNMIMKSY 526
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
+ EM GC P SY I RQ + + L+EM +G
Sbjct: 527 FVTKNYEMGHEIWDEMHQKGCCPDDNSYIVYIGGLIRQDRSGEACKYLEEMLEKGMKAPK 586
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+ Y S ++K+G+ + KM VG
Sbjct: 587 LDYNKFASDISKTGNAVILEELARKMNFVG 616
>gi|449437378|ref|XP_004136469.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial-like [Cucumis sativus]
gi|449503560|ref|XP_004162063.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial-like [Cucumis sativus]
Length = 615
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 121/429 (28%), Positives = 219/429 (51%), Gaps = 16/429 (3%)
Query: 95 AIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMR 154
I PS L+ + F K +F WA G+ S+ ++ ++++L K R+ D
Sbjct: 115 GIVPSSSLLEAVFDHFDSSPKFLHSLFLWAAKKSGFRPSAALFNRLINVLAKSREFDSAW 174
Query: 155 ALLEEMSKG----HIVTLNTIAKVMRRFSGAGQWEDAVRTFD---ELGTFGLEKNTETMN 207
+L+ +G +V++ ++RR++ AG + A+RT++ L T +
Sbjct: 175 SLITSRLRGGEESFLVSVEVFVILIRRYARAGMVQPAIRTYEFACNLETISGTGSEGLFE 234
Query: 208 LLLDTLCKEGKVELARSVF---LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
+LLD+LCKEG V +A F E+ S P+ +NI I+GW + ++ AQ EMK
Sbjct: 235 ILLDSLCKEGHVRVASEYFNRKREMGSSFEPSIRAYNILINGWFRSRKLKHAQRLWFEMK 294
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
+ P V++Y T+I+ YCR + EL+DEM+ +G PN + Y ++ L ++G F+
Sbjct: 295 KNKISPTVVTYGTLIEGYCRMRSVEIAIELVDEMRREGIEPNAIVYNPIVDALGEAGRFK 354
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTM 384
EA+ + E+ ++ P +N L+ +A + A + ++ M G P +T+N
Sbjct: 355 EALGMMERFMVLEQGPTISTYNSLVKGYCKAGDLSGASKILKM-MIGRGFTPTPTTYNYF 413
Query: 385 ITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK 444
FS +G E++ + +M + + P+ T+H LLK + + + + Q+ ++M
Sbjct: 414 FRFFSKYGKIEESMSLYNKMIESGYA-PDKLTYHLLLKMLCEEERLNLAV-QVCNEM-KA 470
Query: 445 HHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT-CRLILDEVKQKHMYD 503
+D+ T T+++H LC+ +K E A+ F+ MI I P+Y T CRL DE ++ +
Sbjct: 471 RGFDMDLATSTMLMHLLCKMHKFEEAFAEFEHMIHRGIVPQYLTFCRL-HDEFMKRGLTK 529
Query: 504 AAEKIEAVM 512
A K++ +M
Sbjct: 530 MASKLQEMM 538
>gi|449454008|ref|XP_004144748.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Cucumis sativus]
gi|449490811|ref|XP_004158714.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Cucumis sativus]
Length = 621
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 199/384 (51%), Gaps = 4/384 (1%)
Query: 95 AIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMR 154
++ SH LV +++ RFK K A F WA PG+ H S+ Y M+ ILGK RQ + M
Sbjct: 170 GVKLSHDLVLEVLARFKQARKPAFRFFCWAAQKPGFAHDSKTYNTMMTILGKTRQFETMV 229
Query: 155 ALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLC 214
+LLEEM++ ++T+ T + F+ A + + AV + + + + ET+N LLD+L
Sbjct: 230 SLLEEMAEKELLTMETFTVCFKAFAAAKERKKAVGVLELMKKYKYKVGVETINCLLDSLG 289
Query: 215 KEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVIS 274
+ + A ++F +L PN T+ + ++GWC++ + EA +M P +++
Sbjct: 290 RAKLGKEALTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEDFKPDIVA 349
Query: 275 YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
++T+++ R S +L + M+A+G P+V +YT ++ K +EA++ E+M+
Sbjct: 350 HNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQAKMKEAVQYFEEMQ 409
Query: 335 IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHH 394
G +PD+ + CLI G R+ + VY EM NG PD T+N +I + ++
Sbjct: 410 GAGCRPDAAIYTCLITGFGNQKRM-DTVYGLLKEMKANGCPPDGKTYNALIKLMTNKRMP 468
Query: 395 EKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTY 454
+ A + ++M + KP T+ ++KS F+T + E D+M K D +Y
Sbjct: 469 DDAVRIYKKMIE-NGIKPTTHTYSMMMKSYFQT-RNYEMGVAAWDEMKLKGCCP-DDNSY 525
Query: 455 TLVIHGLCRANKCEWAYLLFKEMI 478
T+ I GL +C A +EMI
Sbjct: 526 TVFIGGLISLGRCAEAGKYLEEMI 549
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 97/220 (44%), Gaps = 2/220 (0%)
Query: 140 MVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
M++ L + ++ L E M +KG + + ++R F + ++AV+ F+E+ G
Sbjct: 353 MLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQAKMKEAVQYFEEMQGAG 412
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQ 257
+ L+ + +++ + E+K+ PP+ T+N I D+A
Sbjct: 413 CRPDAAIYTCLITGFGNQKRMDTVYGLLKEMKANGCPPDGKTYNALIKLMTNKRMPDDAV 472
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
++M +G P +YS +++SY + N+ DEM+ +GC P+ +YT + L
Sbjct: 473 RIYKKMIENGIKPTTHTYSMMMKSYFQTRNYEMGVAAWDEMKLKGCCPDDNSYTVFIGGL 532
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
G EA + E+M G K +N RA R
Sbjct: 533 ISLGRCAEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGR 572
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/362 (20%), Positives = 140/362 (38%), Gaps = 45/362 (12%)
Query: 152 QMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTF-GLEKNTETMNLLL 210
M A+L+E G ++ + + +V+ RF A + A R F G +++T N ++
Sbjct: 161 NMEAVLDEC--GVKLSHDLVLEVLARFKQARK--PAFRFFCWAAQKPGFAHDSKTYNTMM 216
Query: 211 DTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHP 270
L K + E S+ E+ TF + + +A ++ MK +
Sbjct: 217 TILGKTRQFETMVSLLEEMAEKELLTMETFTVCFKAFAAAKERKKAVGVLELMKKYKYKV 276
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRIT 330
V + + ++ S R + + +++ + PN+ TYT +++ + + EA +I
Sbjct: 277 GVETINCLLDSLGRAKLGKEALTIFEKLHGR-FTPNLQTYTVLLNGWCRVRNLMEAGKIW 335
Query: 331 EKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSH 390
+M KPD N ++ L R + +A+ +++V M G +PD ++ ++ F
Sbjct: 336 NQMIDEDFKPDIVAHNTMLEGLLRCKKRSDAIKLFEV-MKAKGPSPDVKSYTILVRDFCK 394
Query: 391 HGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLD 450
++A EEM C+P D
Sbjct: 395 QAKMKEAVQYFEEMQG-AGCRP-------------------------------------D 416
Query: 451 ITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEA 510
YT +I G + + Y L KEM + P +T ++ + K M D A +I
Sbjct: 417 AAIYTCLITGFGNQKRMDTVYGLLKEMKANGCPPDGKTYNALIKLMTNKRMPDDAVRIYK 476
Query: 511 VM 512
M
Sbjct: 477 KM 478
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 82/180 (45%), Gaps = 10/180 (5%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIV----TLNTIAKVMRRFSGAGQW 184
G + IY ++ G ++MD + LL+EM T N + K+M +
Sbjct: 412 GCRPDAAIYTCLITGFGNQKRMDTVYGLLKEMKANGCPPDGKTYNALIKLM---TNKRMP 468
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNI 242
+DAVR + ++ G++ T T ++++ + + E+ + + ++LK C P + +++ +
Sbjct: 469 DDAVRIYKKMIENGIKPTTHTYSMMMKSYFQTRNYEMGVAAWDEMKLKGCCPDD-NSYTV 527
Query: 243 FIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
FI G + R EA ++EM G + Y+ + R + EL +M+ G
Sbjct: 528 FIGGLISLGRCAEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSG 587
>gi|297821162|ref|XP_002878464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324302|gb|EFH54723.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 628
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 126/426 (29%), Positives = 214/426 (50%), Gaps = 12/426 (2%)
Query: 56 VLCVDSPRLPDIDVIISKVHVGSSEDEVFQ-SLKQDHVCN--AIQPSHYLVNKLIHRFKD 112
V CVDS P+ + KV DE+F + V + ++ SH L+ K++ RF+
Sbjct: 128 VSCVDSSTNPEEVERVCKVI-----DELFALDRNMEAVLDEMKVELSHDLIVKVLERFRH 182
Query: 113 DWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIA 172
K A F WA G+ H S Y M+ IL K RQ + M ++LEEM ++T+ T
Sbjct: 183 ARKPAFRFFCWAAEKQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFT 242
Query: 173 KVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC 232
M+ F+ A + + AV F+ + + + ET+N LLD+L + + A+ +F +LK
Sbjct: 243 IAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER 302
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
PN T+ + ++GWC++ + EA +M G P +++++ +++ R S
Sbjct: 303 FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAI 362
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
+L M+++G PNV +YT ++ K E AI + M G +PD+ + CLI
Sbjct: 363 KLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGF 422
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
G ++ + VY EM E G PD T+N +I + ++ E A + +M + E +P
Sbjct: 423 GTQKKL-DTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNE-IEP 480
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
++ TF+ ++KS F + E S + D+M+ K + D +YT++I GL K A
Sbjct: 481 SIHTFNMIMKSYF-MARNYEMGSAVWDEMIKK-GICPDDNSYTVLIRGLIGEGKSREACR 538
Query: 473 LFKEMI 478
+EM+
Sbjct: 539 YLEEML 544
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 90/399 (22%), Positives = 157/399 (39%), Gaps = 51/399 (12%)
Query: 112 DDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQ-MRALLEEMSKGHIVTLNT 170
DD +G+ SC + E E + ++ ++ +D+ M A+L+EM ++ +
Sbjct: 120 DDVGIEIGV-----SCVDSSTNPEEVERVCKVIDELFALDRNMEAVLDEMKVE--LSHDL 172
Query: 171 IAKVMRRFSGAGQWEDAVRTFDELG-TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL 229
I KV+ RF A + A R F G ++ T N ++ L K + E SV E+
Sbjct: 173 IVKVLERFRHARK--PAFRFFCWAAEKQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEM 230
Query: 230 KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFS 289
+ TF I + + +A + MK + V + + ++ S R
Sbjct: 231 GTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGK 290
Query: 290 KVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
+ L D+++ + PN++TYT +++ + + EA RI M G KPD N ++
Sbjct: 291 EAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVML 349
Query: 350 YTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH 409
L R+ + +A+ ++ V M G P+ ++ MI F E A
Sbjct: 350 EGLLRSRKKSDAIKLFHV-MKSKGPCPNVRSYTIMIRDFCKQSSMETAI----------- 397
Query: 410 CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEW 469
+ DDMV+ L D YT +I G K +
Sbjct: 398 --------------------------EYFDDMVDSG-LQPDAAVYTCLITGFGTQKKLDT 430
Query: 470 AYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
Y L KEM P +T ++ + + M + A +I
Sbjct: 431 VYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRI 469
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 86/202 (42%), Gaps = 1/202 (0%)
Query: 139 MMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
M+ +L ++ D ++ SKG + + ++R F E A+ FD++ G
Sbjct: 348 MLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSG 407
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQ 257
L+ + L+ + K++ + E++ PP+ T+N I + A
Sbjct: 408 LQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHAT 467
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
+M + P + +++ I++SY N+ + DEM +G P+ +YT ++ L
Sbjct: 468 RIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGSAVWDEMIKKGICPDDNSYTVLIRGL 527
Query: 318 AKSGDFEEAIRITEKMKIVGSK 339
G EA R E+M G K
Sbjct: 528 IGEGKSREACRYLEEMLDKGMK 549
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 6/177 (3%)
Query: 337 GSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEK 396
G DSR +N ++ L + + + V V + EM G+ TF + F+ +K
Sbjct: 199 GFAHDSRTYNSMMSILAKTRQFETMVSVLE-EMGTKGLLT-METFTIAMKAFAAAKERKK 256
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTL 456
A + E M K + K V+T + LL S + E +Q+L D + K + ++ TYT+
Sbjct: 257 AVGIFELMKKYKF-KIGVETINCLLDSLGRAKLGKE--AQVLFDKL-KERFTPNMMTYTV 312
Query: 457 VIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
+++G CR A ++ +MI + P ++L+ + + A K+ VMK
Sbjct: 313 LLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMK 369
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 53/267 (19%), Positives = 98/267 (36%), Gaps = 10/267 (3%)
Query: 81 DEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMM 140
D + Q LK D V + + L L R K D + + G CP Y +M
Sbjct: 332 DMIDQGLKPDIVAHNVM----LEGLLRSRKKSDAIKLFHVMKSKGPCPNVRS----YTIM 383
Query: 141 VDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAV-RTFDELGTFGL 199
+ K M+ ++M + + + G + D V E+ G
Sbjct: 384 IRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGH 443
Query: 200 EKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQW 258
+ +T N L+ + + E A ++ ++ ++ I P+ HTFN+ + + +
Sbjct: 444 PPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGSA 503
Query: 259 TIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLA 318
EM G P SY+ +I+ + + L+EM +G ++ Y +
Sbjct: 504 VWDEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFH 563
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRFF 345
K G E + ++ K G + F
Sbjct: 564 KGGQPEIFEELAQRAKFSGKFAAAEIF 590
>gi|15228788|ref|NP_191813.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122214682|sp|Q3EAF8.1|PP294_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g62540, mitochondrial; Flags: Precursor
gi|332646841|gb|AEE80362.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 599
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 130/459 (28%), Positives = 222/459 (48%), Gaps = 20/459 (4%)
Query: 25 FHSSSENCSHIVSSSPIESYCSDGARLDHHQVLCVDSPRLPD-----IDVIISKVHVGSS 79
F S S N S +ES C + + V CV+S P+ VI + +
Sbjct: 92 FSSGSSNVSDGCDEE-VESECDND---EETGVSCVESSTNPEEVERVCKVIDELFALDRN 147
Query: 80 EDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEM 139
+ V +K D SH L+ +++ RF+ K A F WA G+ H+S Y
Sbjct: 148 MEAVLDEMKLDL-------SHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHASRTYNS 200
Query: 140 MVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGL 199
M+ IL K RQ + M ++LEEM ++T+ T M+ F+ A + + AV F+ + +
Sbjct: 201 MMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKF 260
Query: 200 EKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWT 259
+ ET+N LLD+L + + A+ +F +LK PN T+ + ++GWC++ + EA
Sbjct: 261 KIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARI 320
Query: 260 IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK 319
+M HG P +++++ +++ R S +L M+++G PNV +YT ++ K
Sbjct: 321 WNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCK 380
Query: 320 SGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTS 379
E AI + M G +PD+ + CLI G ++ + VY EM E G PD
Sbjct: 381 QSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKL-DTVYELLKEMQEKGHPPDGK 439
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLD 439
T+N +I + ++ E + +M + E +P++ TF+ ++KS F + E + D
Sbjct: 440 TYNALIKLMANQKMPEHGTRIYNKMIQNE-IEPSIHTFNMIMKSYF-VARNYEMGRAVWD 497
Query: 440 DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
+M+ K + D +YT++I GL K A +EM+
Sbjct: 498 EMIKK-GICPDDNSYTVLIRGLISEGKSREACRYLEEML 535
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 150/385 (38%), Gaps = 46/385 (11%)
Query: 126 SCPGYEHSSEIYEMMVDILGKVRQMDQ-MRALLEEMSKGHIVTLNTIAKVMRRFSGAGQW 184
SC + E E + ++ ++ +D+ M A+L+EM ++ + I +V+ RF A +
Sbjct: 120 SCVESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLD--LSHDLIVEVLERFRHARK- 176
Query: 185 EDAVRTFDELGTF-GLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIF 243
A R F G + T N ++ L K + E SV E+ + TF I
Sbjct: 177 -PAFRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIA 235
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
+ + +A + MK + V + + ++ S R + L D+++ +
Sbjct: 236 MKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-F 294
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
PN++TYT +++ + + EA RI M G KPD N ++ L R+ + +A+
Sbjct: 295 TPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIK 354
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
++ V M G P+ ++ MI F E A
Sbjct: 355 LFHV-MKSKGPCPNVRSYTIMIRDFCKQSSMETAI------------------------- 388
Query: 424 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
+ DDMV+ L D YT +I G K + Y L KEM
Sbjct: 389 ------------EYFDDMVDSG-LQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHP 435
Query: 484 PRYQTCRLILDEVKQKHMYDAAEKI 508
P +T ++ + + M + +I
Sbjct: 436 PDGKTYNALIKLMANQKMPEHGTRI 460
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 86/202 (42%), Gaps = 1/202 (0%)
Query: 139 MMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
M+ +L +++ D ++ SKG + + ++R F E A+ FD++ G
Sbjct: 339 MLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSG 398
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQ 257
L+ + L+ + K++ + E++ PP+ T+N I +
Sbjct: 399 LQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGT 458
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
+M + P + +++ I++SY N+ + DEM +G P+ +YT ++ L
Sbjct: 459 RIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGL 518
Query: 318 AKSGDFEEAIRITEKMKIVGSK 339
G EA R E+M G K
Sbjct: 519 ISEGKSREACRYLEEMLDKGMK 540
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 81/172 (47%), Gaps = 6/172 (3%)
Query: 342 SRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVL 401
SR +N ++ L + + + V V + EM G+ TF + F+ +KA +
Sbjct: 195 SRTYNSMMSILAKTRQFETMVSVLE-EMGTKGLLT-METFTIAMKAFAAAKERKKAVGIF 252
Query: 402 EEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGL 461
E M K + K V+T + LL S + E +Q+L D + K + ++ TYT++++G
Sbjct: 253 ELMKKYKF-KIGVETINCLLDSLGRAKLGKE--AQVLFDKL-KERFTPNMMTYTVLLNGW 308
Query: 462 CRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
CR A ++ +MI H + P ++L+ + + A K+ VMK
Sbjct: 309 CRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMK 360
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 73/158 (46%), Gaps = 2/158 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDA 187
G + + +Y ++ G +++D + LL+EM KGH T +++ + E
Sbjct: 398 GLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHG 457
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHG 246
R ++++ +E + T N+++ + E+ R+V+ E+ K I P+ +++ + I G
Sbjct: 458 TRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRG 517
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCR 284
+ EA ++EM G +I Y+ + R
Sbjct: 518 LISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHR 555
>gi|357508583|ref|XP_003624580.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499595|gb|AES80798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 585
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 128/451 (28%), Positives = 225/451 (49%), Gaps = 17/451 (3%)
Query: 60 DSPRLPDIDVIISKVHV-GSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSAL 118
D + D+ I+ +H GS E+ Q L+ CN ++ S LV +++ R ++DW++A
Sbjct: 94 DDGFVKDVKTILDIIHKPGSGPYEIKQKLED---CN-VKASSELVVEVLSRVRNDWEAAF 149
Query: 119 GIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGH----IVTLNTIAKV 174
F WAG PGY+HS Y M+ +LGK+R+ D AL+EEM +G IVT T+ +
Sbjct: 150 TFFLWAGKQPGYDHSVREYHSMISVLGKMRRFDTAWALVEEMRRGKTGESIVTPQTLLIM 209
Query: 175 MRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIP 234
+R++ A+ TF F + LL LC+ V+ A + K+ P
Sbjct: 210 IRKYCAVHDVGRAINTFYAFKRFNFQVGLYEFQGLLSALCRYKNVQDAEHLLFCNKNVFP 269
Query: 235 PNAHTFNIFIHGWCK-INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
+ +FNI ++GWC I A+ +EM V+SY++II Y + +V +
Sbjct: 270 LDTKSFNIILNGWCNLIVSARNAERIWEEMSKRRIQHDVVSYASIISCYSKSSKLYRVLQ 329
Query: 294 LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLG 353
L ++M+ + P+ Y V+ LAK+ +EA+ + KM+ PD+ +N LI L
Sbjct: 330 LFEQMKKRNITPDRKVYNAVIFSLAKNRMVKEAVNLIIKMEDNNVTPDAITYNSLIKPLC 389
Query: 354 RASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPN 413
+A ++ EA ++ V M E G++P TF+ + E+ F +L++M +L C P
Sbjct: 390 KARKIDEAKEIFNV-MLERGISPSIRTFHAFFRILR---VKEEVFELLDKMKEL-GCNPT 444
Query: 414 VQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLL 473
++T+ L++ + + DE + + + + + + D ++Y ++IHGL K E AY
Sbjct: 445 IETYIMLIRKFCRWRQLDEV--KRIWNAMREDGIGHDRSSYIVLIHGLFLNCKVEEAYKY 502
Query: 474 FKEMIGHDITPRYQTCRLILDEVKQKHMYDA 504
+ EM P +T ++ + + + D+
Sbjct: 503 YIEMQEKGFLPEPKTESMLQAWLSGRQVTDS 533
>gi|359496995|ref|XP_003635394.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Vitis vinifera]
Length = 622
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 128/495 (25%), Positives = 243/495 (49%), Gaps = 47/495 (9%)
Query: 23 IRFHSSSENCSHIVSSSPIESYCSDGARLDHHQVLCVDSPRLPDIDVIISKVHVGSSEDE 82
+R S+ ENC++ + + +D ++ +++L R+P +++ + + V
Sbjct: 36 VRLESNRENCTY---DQNYDEFSADVEKV--YRILRKFHSRVPKLELALQESGV------ 84
Query: 83 VFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVD 142
A++ L ++++R D F WA PGY HS E+Y+ M+
Sbjct: 85 ------------AVRSG--LTERVLNRCGDAGNLGYRFFVWASKQPGYRHSYEVYKAMIK 130
Query: 143 ILGKVRQMDQMRALLEEMSKGH--IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLE 200
ILGK+RQ + AL+EEM + + V+ +MRRF+ A + A+ DE+ +G E
Sbjct: 131 ILGKMRQFGAVWALIEEMRRENPQFVSPYVFVVLMRRFASARMVKKAIEVLDEMPKYGCE 190
Query: 201 KNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTI 260
+ LLD LCK G V+ A S+F +++ P F ++GWC+ ++ EA++ +
Sbjct: 191 PDEHVFGCLLDALCKNGSVKEAASLFEDMRIRFTPTLKHFTSLLYGWCREGKLMEAKYVL 250
Query: 261 QEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKS 320
+++ G P ++ Y+ ++ Y Y+LL EM+ + C PNV+++TT++ L
Sbjct: 251 VQIREAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRKECEPNVMSFTTLIQALCAK 310
Query: 321 GDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTST 380
EEA+R+ +M+ G D+ + LI + ++ + Y M + G P+ T
Sbjct: 311 KKMEEAMRVFFEMQSCGCPADAVTYTTLISGFCKWGKISKG-YELLDNMIQQGHIPNPMT 369
Query: 381 FNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDD 440
+ ++ E+ ++EEM K+ C P++ ++ +++ K G+ E + ++ ++
Sbjct: 370 YLHIMAAHEKKEELEECIELMEEMRKI-GCTPDLNIYNIVIRLACKLGEIKEGV-RVWNE 427
Query: 441 MVNKHHLSLDITTYTLVIHGL----CRANKCEWAYLLFKEMIGHDI--TPRYQTCRLILD 494
M LS + T+ ++IHG C CE+ FKEM+G + P+Y T + +L+
Sbjct: 428 M-EATGLSPGLDTFVIMIHGFLSQRCLVEACEF----FKEMVGRGLLSAPQYGTLKELLN 482
Query: 495 EVKQKHMYDAAEKIE 509
+ + AEK+E
Sbjct: 483 SLLR------AEKLE 491
>gi|15241508|ref|NP_196986.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173968|sp|Q9LEQ7.1|PP382_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g14820, mitochondrial; Flags: Precursor
gi|9755750|emb|CAC01881.1| putative protein [Arabidopsis thaliana]
gi|332004697|gb|AED92080.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 130/459 (28%), Positives = 221/459 (48%), Gaps = 20/459 (4%)
Query: 25 FHSSSENCSHIVSSSPIESYCSDGARLDHHQVLCVDSPRLPD-----IDVIISKVHVGSS 79
F S S N S +ES C + + V CV+S P+ VI + +
Sbjct: 91 FSSGSSNVSDGCDEE-VESECDND---EETGVSCVESSTNPEEVERVCKVIDELFALDRN 146
Query: 80 EDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEM 139
+ V +K D SH L+ +++ RF+ K A F WA G+ H S Y
Sbjct: 147 MEAVLDEMKLDL-------SHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNS 199
Query: 140 MVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGL 199
M+ IL K RQ + M ++LEEM ++T+ T M+ F+ A + + AV F+ + +
Sbjct: 200 MMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKF 259
Query: 200 EKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWT 259
+ ET+N LLD+L + + A+ +F +LK PN T+ + ++GWC++ + EA
Sbjct: 260 KIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARI 319
Query: 260 IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK 319
+M HG P +++++ +++ R S +L M+++G PNV +YT ++ K
Sbjct: 320 WNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCK 379
Query: 320 SGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTS 379
E AI + M G +PD+ + CLI G ++ + VY EM E G PD
Sbjct: 380 QSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKL-DTVYELLKEMQEKGHPPDGK 438
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLD 439
T+N +I + ++ E + +M + E +P++ TF+ ++KS F + E + D
Sbjct: 439 TYNALIKLMANQKMPEHGTRIYNKMIQNE-IEPSIHTFNMIMKSYF-VARNYEMGRAVWD 496
Query: 440 DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
+M+ K + D +YT++I GL K A +EM+
Sbjct: 497 EMIKK-GICPDDNSYTVLIRGLISEGKSREACRYLEEML 534
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 151/385 (39%), Gaps = 46/385 (11%)
Query: 126 SCPGYEHSSEIYEMMVDILGKVRQMDQ-MRALLEEMSKGHIVTLNTIAKVMRRFSGAGQW 184
SC + E E + ++ ++ +D+ M A+L+EM ++ + I +V+ RF A +
Sbjct: 119 SCVESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLD--LSHDLIVEVLERFRHARK- 175
Query: 185 EDAVRTFDELGTF-GLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIF 243
A R F G ++ T N ++ L K + E SV E+ + TF I
Sbjct: 176 -PAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIA 234
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
+ + +A + MK + V + + ++ S R + L D+++ +
Sbjct: 235 MKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-F 293
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
PN++TYT +++ + + EA RI M G KPD N ++ L R+ + +A+
Sbjct: 294 TPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIK 353
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
++ V M G P+ ++ MI F E A
Sbjct: 354 LFHV-MKSKGPCPNVRSYTIMIRDFCKQSSMETAI------------------------- 387
Query: 424 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
+ DDMV+ L D YT +I G K + Y L KEM
Sbjct: 388 ------------EYFDDMVDSG-LQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHP 434
Query: 484 PRYQTCRLILDEVKQKHMYDAAEKI 508
P +T ++ + + M + +I
Sbjct: 435 PDGKTYNALIKLMANQKMPEHGTRI 459
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 86/202 (42%), Gaps = 1/202 (0%)
Query: 139 MMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
M+ +L +++ D ++ SKG + + ++R F E A+ FD++ G
Sbjct: 338 MLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSG 397
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQ 257
L+ + L+ + K++ + E++ PP+ T+N I +
Sbjct: 398 LQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGT 457
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
+M + P + +++ I++SY N+ + DEM +G P+ +YT ++ L
Sbjct: 458 RIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGL 517
Query: 318 AKSGDFEEAIRITEKMKIVGSK 339
G EA R E+M G K
Sbjct: 518 ISEGKSREACRYLEEMLDKGMK 539
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 83/177 (46%), Gaps = 6/177 (3%)
Query: 337 GSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEK 396
G DSR +N ++ L + + + V V + EM G+ TF + F+ +K
Sbjct: 189 GFAHDSRTYNSMMSILAKTRQFETMVSVLE-EMGTKGLLT-METFTIAMKAFAAAKERKK 246
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTL 456
A + E M K + K V+T + LL S + E +Q+L D + K + ++ TYT+
Sbjct: 247 AVGIFELMKKYKF-KIGVETINCLLDSLGRAKLGKE--AQVLFDKL-KERFTPNMMTYTV 302
Query: 457 VIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
+++G CR A ++ +MI H + P ++L+ + + A K+ VMK
Sbjct: 303 LLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMK 359
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 73/158 (46%), Gaps = 2/158 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDA 187
G + + +Y ++ G +++D + LL+EM KGH T +++ + E
Sbjct: 397 GLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHG 456
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHG 246
R ++++ +E + T N+++ + E+ R+V+ E+ K I P+ +++ + I G
Sbjct: 457 TRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRG 516
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCR 284
+ EA ++EM G +I Y+ + R
Sbjct: 517 LISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHR 554
>gi|147767159|emb|CAN71515.1| hypothetical protein VITISV_021787 [Vitis vinifera]
Length = 655
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 117/416 (28%), Positives = 212/416 (50%), Gaps = 22/416 (5%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS 161
L ++++R D F WA PGY HS E+Y+ M+ ILGK+RQ + AL+EEM
Sbjct: 123 LTERVLNRCGDAGNLGYRFFVWASKQPGYRHSYEVYKAMIKILGKMRQFGAVWALIEEMR 182
Query: 162 KGH--IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV 219
+ + V+ +MRRF+ A + A+ DE+ +G E + LLD LCK G V
Sbjct: 183 RENPQFVSPYVFVVLMRRFASARMVKKAIEVLDEMPKYGCEPDEHVFGCLLDALCKNGSV 242
Query: 220 ELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
+ A S+F +++ P F ++GWC+ ++ EA++ + +++ G P ++ Y+ ++
Sbjct: 243 KEAASLFEDMRIRFTPTLKHFTSLLYGWCREGKLMEAKYVLVQIREAGFEPDIVVYNNLL 302
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
Y Y+LL EM+ + C PNV+++TT++ L EEA+R+ +M+ G
Sbjct: 303 TGYAAAGKMVDAYDLLKEMRRKECEPNVMSFTTLIQALCAKKKMEEAMRVFFEMQSCGCP 362
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
D+ + LI + ++ + Y M + G P+ T+ ++ E+
Sbjct: 363 ADAVTYTTLISGFCKWGKISKG-YELLDNMIQQGHIPNPMTYLHIMAAHEKKEELEECIE 421
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIH 459
++EEM K+ C P++ ++ +++ K G+ E + ++ ++M LS + T+ ++IH
Sbjct: 422 LMEEMRKI-GCTPDLNIYNIVIRLACKLGEIKEGV-RVWNEM-EATGLSPGLDTFVIMIH 478
Query: 460 GL----CRANKCEWAYLLFKEMIGHDI--TPRYQTCRLILDEVKQKHMYDAAEKIE 509
G C CE+ FKEM+G + P+Y T + +L+ + + AEK+E
Sbjct: 479 GFLSQRCLVEACEF----FKEMVGRGLLSAPQYGTLKELLNSLLR------AEKLE 524
>gi|225443015|ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Vitis vinifera]
Length = 624
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 115/400 (28%), Positives = 203/400 (50%), Gaps = 11/400 (2%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS 161
LV +++ R K+ SA F WA PG+EHS E Y ++VDILG +Q + L +M
Sbjct: 82 LVEQVLKRCKNLGFSAHRFFLWAKRLPGFEHSKESYHILVDILGSSKQFPLIWDFLSDMR 141
Query: 162 KGHIVTL--NTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV 219
+ + + R + A DA+R F ++G FG++ ++ LL LCK V
Sbjct: 142 ETRCCEICPEIFWLIFRAYCRANLPGDAIRAFHQMGDFGVKAGVGDVDQLLYVLCKRKHV 201
Query: 220 ELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
+ A+ F ++ + PNA T++I + GW + EA+ +EM+ GC V++Y++++
Sbjct: 202 KQAQEFFDKVNVEVMPNAKTYSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLL 261
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
++ C+ N + Y+L EM + G P+ +Y+ + + D A ++ ++M+
Sbjct: 262 EALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLV 321
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQV--EMPENGVAPDTSTFNTMITMFSHHGHHEKA 397
P+ +NC++ L ++ +V EA YQ+ EM E GV+PD ++N + H KA
Sbjct: 322 PNVFTYNCIVKKLCKSEKVDEA---YQLLDEMIERGVSPDLWSYNAIQAFHCDHCEVNKA 378
Query: 398 FHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLV 457
++ M K E+C P+ T++ +LK + G+ D ++ + M + +TY ++
Sbjct: 379 LRLISRMEK-ENCMPDRHTYNMVLKMLLRVGRFDR-VTDVWGGMEERGFYPA-ASTYAVM 435
Query: 458 IHGLC-RANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV 496
+HG C + K E A F+ MI I P T L+ + V
Sbjct: 436 VHGFCKKKGKLEEACKYFEMMIDDGIPPYSCTVELLRNRV 475
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 126/281 (44%), Gaps = 4/281 (1%)
Query: 133 SSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTF 191
+++ Y +++ G V + R L EEM +G V + ++ G ++A + F
Sbjct: 218 NAKTYSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDEAYKLF 277
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKI 250
E+G+ GL + + ++ + C+ + A V ++ + PN T+N + CK
Sbjct: 278 REMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCIVKKLCKS 337
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
+VDEA + EM G P + SY+ I +C +K L+ M+ + C P+ TY
Sbjct: 338 EKVDEAYQLLDEMIERGVSPDLWSYNAIQAFHCDHCEVNKALRLISRMEKENCMPDRHTY 397
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL-GRASRVQEAVYVYQVEM 369
V+ L + G F+ + M+ G P + + +++ + +++EA +++ M
Sbjct: 398 NMVLKMLLRVGRFDRVTDVWGGMEERGFYPAASTYAVMVHGFCKKKGKLEEACKYFEM-M 456
Query: 370 PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHC 410
++G+ P + T + G E+ + +M + C
Sbjct: 457 IDDGIPPYSCTVELLRNRVIGLGFSEQIDVLAGKMERSTSC 497
>gi|224128340|ref|XP_002320305.1| predicted protein [Populus trichocarpa]
gi|222861078|gb|EEE98620.1| predicted protein [Populus trichocarpa]
Length = 540
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 113/386 (29%), Positives = 198/386 (51%), Gaps = 8/386 (2%)
Query: 95 AIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMR 154
I SH LV +++ RF+ K A F WA PG+ H S Y M+ IL K RQ + M
Sbjct: 101 GINLSHDLVIEVLERFRHARKPAFRFFCWAAEKPGFVHDSRTYHSMMIILAKARQFETMM 160
Query: 155 ALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLC 214
++LEEM + ++TL+T + MR F+ A + + AV F+ + ET+N LLD+L
Sbjct: 161 SMLEEMGEKRLLTLDTFSIAMRAFAAAKERKKAVGIFELMKNHKYRVGVETINALLDSLG 220
Query: 215 KEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVIS 274
+ + A+++F +L+ PN T+ + ++GWC++ + EA EM G P +++
Sbjct: 221 RAKLGKEAQALFGKLEGRFTPNLRTYTVLLNGWCRVKNLMEAGRIWNEMLDEGFKPDIVT 280
Query: 275 YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
++ +++ R S + + M+A+G P+V +YT ++ L K +EA+ +M
Sbjct: 281 HNIMLEGLLRSKKRSDAIKFFEVMKAKGPSPDVRSYTILIRDLCKQTKMKEAVGYFYEMV 340
Query: 335 IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHH 394
G PD+ + CL+ G R+ + VY EM E G PD T+N +I + +
Sbjct: 341 DSGCHPDAAVYTCLMTGYGNHKRM-DMVYELLKEMKEKGCPPDGKTYNALIKLMTSQRMP 399
Query: 395 EKAFHVLEEM--NKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
+ A + ++M N +E P++ +++ ++KS F+ + + + D ++K D
Sbjct: 400 DDAVRIYKKMIQNGIE---PSIHSYNMIMKSYFRIRNYE--MGHAVWDEMSKKGFCPDDN 454
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMI 478
+YT+ I GL + E A +EMI
Sbjct: 455 SYTVFIGGLISQGRSEEACKYLEEMI 480
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 41/239 (17%)
Query: 156 LLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK 215
+L+E K IVT N + + + R + + DA++ F+ + G + + +L+ LCK
Sbjct: 269 MLDEGFKPDIVTHNIMLEGLLR---SKKRSDAIKFFEVMKAKGPSPDVRSYTILIRDLCK 325
Query: 216 EGKVELARSVFLEL-------------------------------------KSCIPPNAH 238
+ K++ A F E+ K C PP+
Sbjct: 326 QTKMKEAVGYFYEMVDSGCHPDAAVYTCLMTGYGNHKRMDMVYELLKEMKEKGC-PPDGK 384
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
T+N I D+A ++M +G P + SY+ I++SY R N+ + + DEM
Sbjct: 385 TYNALIKLMTSQRMPDDAVRIYKKMIQNGIEPSIHSYNMIMKSYFRIRNYEMGHAVWDEM 444
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
+G P+ +YT + L G EEA + E+M G K +N RA +
Sbjct: 445 SKKGFCPDDNSYTVFIGGLISQGRSEEACKYLEEMIEKGMKAPQLDYNKFAADFSRAGK 503
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 95/207 (45%), Gaps = 8/207 (3%)
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
II + RQ F + +L+EM + + T++ M A + + ++A+ I E MK
Sbjct: 148 IILAKARQ--FETMMSMLEEMGEKRLL-TLDTFSIAMRAFAAAKERKKAVGIFELMKNHK 204
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKA 397
+ N L+ +LGRA +EA ++ E P+ T+ ++ + + +A
Sbjct: 205 YRVGVETINALLDSLGRAKLGKEAQALFG--KLEGRFTPNLRTYTVLLNGWCRVKNLMEA 262
Query: 398 FHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLV 457
+ EM E KP++ T + +L+ ++ K + + +++ S D+ +YT++
Sbjct: 263 GRIWNEMLD-EGFKPDIVTHNIMLEGLLRSKKRSDAIKFF--EVMKAKGPSPDVRSYTIL 319
Query: 458 IHGLCRANKCEWAYLLFKEMIGHDITP 484
I LC+ K + A F EM+ P
Sbjct: 320 IRDLCKQTKMKEAVGYFYEMVDSGCHP 346
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 96/235 (40%), Gaps = 5/235 (2%)
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
++S ++++ K + + M+ V T ++ L ++ +EA + K+
Sbjct: 176 TFSIAMRAFAAAKERKKAVGIFELMKNHKYRVGVETINALLDSLGRAKLGKEAQALFGKL 235
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
+ + P+ R + L+ R + EA ++ EM + G PD T N M+
Sbjct: 236 EGRFT-PNLRTYTVLLNGWCRVKNLMEAGRIWN-EMLDEGFKPDIVTHNIMLEGLLRSKK 293
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
A E M K + P+V+++ L++ K K E + + + + H D
Sbjct: 294 RSDAIKFFEVM-KAKGPSPDVRSYTILIRDLCKQTKMKEAVGYFYEMVDSGCHP--DAAV 350
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
YT ++ G + + Y L KEM P +T ++ + + M D A +I
Sbjct: 351 YTCLMTGYGNHKRMDMVYELLKEMKEKGCPPDGKTYNALIKLMTSQRMPDDAVRI 405
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 80/175 (45%), Gaps = 10/175 (5%)
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
DSR ++ ++ L +A + + + + + EM E + TF+ + F+ +KA +
Sbjct: 139 DSRTYHSMMIILAKARQFETMMSMLE-EMGEKRLLT-LDTFSIAMRAFAAAKERKKAVGI 196
Query: 401 LEEMNKLEHCKPNVQTFHPLLKSC--FKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
E M ++ + V+T + LL S K GK + L L+ + ++ TYT+++
Sbjct: 197 FELMKNHKY-RVGVETINALLDSLGRAKLGKEAQALFGKLEG-----RFTPNLRTYTVLL 250
Query: 459 HGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
+G CR A ++ EM+ P T ++L+ + + A K VMK
Sbjct: 251 NGWCRVKNLMEAGRIWNEMLDEGFKPDIVTHNIMLEGLLRSKKRSDAIKFFEVMK 305
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 31/154 (20%), Positives = 65/154 (42%), Gaps = 1/154 (0%)
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKIN 251
E+ G + +T N L+ + + + A ++ ++ ++ I P+ H++N+ + + +I
Sbjct: 373 EMKEKGCPPDGKTYNALIKLMTSQRMPDDAVRIYKKMIQNGIEPSIHSYNMIMKSYFRIR 432
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
+ EM G P SY+ I Q + + L+EM +G + Y
Sbjct: 433 NYEMGHAVWDEMSKKGFCPDDNSYTVFIGGLISQGRSEEACKYLEEMIEKGMKAPQLDYN 492
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFF 345
+ +++G + + +KMK G S F
Sbjct: 493 KFAADFSRAGKPDILEELAQKMKFSGKFEVSNVF 526
>gi|413949009|gb|AFW81658.1| hypothetical protein ZEAMMB73_233967 [Zea mays]
Length = 637
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 123/469 (26%), Positives = 225/469 (47%), Gaps = 15/469 (3%)
Query: 47 DGARLDHHQVLCVDSPRLPDIDVIISKVHVGSSEDEVFQSLK--QDHVCNAIQPSHYLVN 104
DG L+ + + + I+ V ++ + +L +C A+ V
Sbjct: 143 DGGSLEQEDAATSNPEGVGRVCAAIADVIAAGADANLEAALSALSPPLCEAV------VL 196
Query: 105 KLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGH 164
++HRFK + + FRWA + G+ H++ Y M+ ILGK RQ + M ALL+EM K
Sbjct: 197 AVLHRFKHAHRPSYRFFRWATASGGFTHTTITYCKMLLILGKTRQFESMVALLQEMGKAG 256
Query: 165 IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARS 224
++++ ++ F+ AG+ ++AV F+ + G + E+ N LL L EG AR
Sbjct: 257 TLSMDAFKVAIKSFAAAGEIKNAVGVFELMRKNGFDDGVESFNCLLVALANEGLGREARQ 316
Query: 225 VFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCR 284
VF ++ P+ ++ + WC + EA EM G P V+ ++T+I+ R
Sbjct: 317 VFDKMLGQYSPDLRSYTALMLAWCNARNLVEAGRVWNEMLEKGMKPDVVVHNTMIEGLLR 376
Query: 285 QYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRF 344
+ ++ + M+A+G PPNV TYT ++ K G + A+ E+M+ +PD
Sbjct: 377 GQRQHEAVKMFELMKAKGPPPNVWTYTMLICNHCKRGKMDMAMECFEEMQEARCQPDVAT 436
Query: 345 FNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
+ CL+ G A R+ V + EM + G PD T+N +I + ++ + A + ++M
Sbjct: 437 YTCLLVGYGNAKRMDRVTAVLE-EMTQKGCPPDARTYNALIKLLTNRKMPDDAARIYKKM 495
Query: 405 NKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRA 464
K + P + T++ ++KS F G + + + + +++ + D+ +YT+ I G R
Sbjct: 496 IK-KGLDPTIHTYNMMMKSYF-LGDRNYAMGCAVWEEMHRRGICPDVNSYTVFISGHIRH 553
Query: 465 NKCEWAYLLFKEMIGHDI-TPRYQTCRLILDEVKQKH---MYDAAEKIE 509
+ E AY +EMI + P+ + D K +Y+ A+K++
Sbjct: 554 GRPEEAYKYIEEMINKGMKAPQIDCNKFAADLSKAGKLDMLYELAQKVK 602
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 109/258 (42%), Gaps = 12/258 (4%)
Query: 260 IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK 319
+QEM G + ++ I+S+ + + M+ G V ++ ++ LA
Sbjct: 249 LQEM-GKAGTLSMDAFKVAIKSFAAAGEIKNAVGVFELMRKNGFDDGVESFNCLLVALAN 307
Query: 320 SGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTS 379
G EA ++ +KM + PD R + L+ A + EA V+ EM E G+ PD
Sbjct: 308 EGLGREARQVFDKM-LGQYSPDLRSYTALMLAWCNARNLVEAGRVWN-EMLEKGMKPDVV 365
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD---ECLSQ 436
NTMI +A + E M K + PNV T+ L+ + K GK D EC +
Sbjct: 366 VHNTMIEGLLRGQRQHEAVKMFELM-KAKGPPPNVWTYTMLICNHCKRGKMDMAMECFEE 424
Query: 437 LLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV 496
+ + D+ TYT ++ G A + + + +EM P +T ++ +
Sbjct: 425 M-----QEARCQPDVATYTCLLVGYGNAKRMDRVTAVLEEMTQKGCPPDARTYNALIKLL 479
Query: 497 KQKHMYDAAEKIEAVMKK 514
+ M D A +I M K
Sbjct: 480 TNRKMPDDAARIYKKMIK 497
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 86/206 (41%), Gaps = 7/206 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y M++ K +MD EEM + + T ++ + A + + +E+
Sbjct: 402 YTMLICNHCKRGKMDMAMECFEEMQEARCQPDVATYTCLLVGYGNAKRMDRVTAVLEEMT 461
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINR-- 252
G + T N L+ L + A ++ ++ K + P HT+N+ + + +R
Sbjct: 462 QKGCPPDARTYNALIKLLTNRKMPDDAARIYKKMIKKGLDPTIHTYNMMMKSYFLGDRNY 521
Query: 253 -VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
+ A W +EM G P V SY+ I + R + Y+ ++EM +G +
Sbjct: 522 AMGCAVW--EEMHRRGICPDVNSYTVFISGHIRHGRPEEAYKYIEEMINKGMKAPQIDCN 579
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVG 337
+ L+K+G + + +K+K G
Sbjct: 580 KFAADLSKAGKLDMLYELAQKVKFAG 605
>gi|413945076|gb|AFW77725.1| ATP binding protein isoform 1 [Zea mays]
gi|413945077|gb|AFW77726.1| ATP binding protein isoform 2 [Zea mays]
gi|413945078|gb|AFW77727.1| ATP binding protein isoform 3 [Zea mays]
Length = 634
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 112/412 (27%), Positives = 210/412 (50%), Gaps = 7/412 (1%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS 161
+V ++HRFK + + FRWA G+ H++ Y M+ ILGK RQ + M A+++EM
Sbjct: 196 VVLAVLHRFKHAHRPSYRFFRWATVSGGFTHTTITYCKMLHILGKTRQFESMVAMIQEMG 255
Query: 162 KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVEL 221
K ++++ ++ F+ AG+ ++AV F+ + G + E+ N LL L KEG
Sbjct: 256 KAGALSMDAFKVAIKSFAAAGEIKNAVGVFELMRKNGFDDGVESFNCLLVALAKEGLGRE 315
Query: 222 ARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQS 281
AR VF ++ P+ ++ + WC + EA EM G P V+ ++T+I+
Sbjct: 316 ARQVFDKMHGQYSPDLRSYTALMLAWCNARNLVEAGRVWNEMLEKGMDPDVVVHNTMIEG 375
Query: 282 YCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPD 341
R + ++ + M+A+G PPNV TYT ++ K G + A+ E+M+ +PD
Sbjct: 376 LLRGQRRPEAVKMFELMKAKGPPPNVWTYTMLIRDHCKQGKMDMAMECFEEMQEAKCQPD 435
Query: 342 SRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVL 401
+ CL+ G A ++ V + EM + G PD T+N +I + ++ + A +
Sbjct: 436 VATYTCLLVGYGNAKQMDRVTAVLE-EMTQKGCPPDARTYNALIKLLTNRNMPDDAARIY 494
Query: 402 EEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGL 461
++M K + +P + T++ ++KS F G ++ + + + +++ + D+ +YT+ I+G
Sbjct: 495 KKMIK-KGLEPTIHTYNMMMKSYF-VGDSNYAMGCAVWEEMHQRGICPDVNSYTVFINGH 552
Query: 462 CRANKCEWAYLLFKEMIGHDI-TPRYQTCRLILDEVKQKH---MYDAAEKIE 509
R + E AY +EMI + P+ + D K +++ A+K++
Sbjct: 553 IRHGRPEEAYKYIEEMINKGMKAPQIDYNKFAADFSKAGKPDILFELAQKVK 604
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 118/279 (42%), Gaps = 12/279 (4%)
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
T+ +H K + + IQEM G + ++ I+S+ + + M
Sbjct: 230 TYCKMLHILGKTRQFESMVAMIQEMGKAGAL-SMDAFKVAIKSFAAAGEIKNAVGVFELM 288
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRV 358
+ G V ++ ++ LAK G EA ++ +KM S PD R + L+ A +
Sbjct: 289 RKNGFDDGVESFNCLLVALAKEGLGREARQVFDKMHGQYS-PDLRSYTALMLAWCNARNL 347
Query: 359 QEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFH 418
EA V+ EM E G+ PD NTMI +A + E M K + PNV T+
Sbjct: 348 VEAGRVWN-EMLEKGMDPDVVVHNTMIEGLLRGQRRPEAVKMFELM-KAKGPPPNVWTYT 405
Query: 419 PLLKSCFKTGKTD---ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFK 475
L++ K GK D EC ++ + D+ TYT ++ G A + + + +
Sbjct: 406 MLIRDHCKQGKMDMAMECFEEMQEAKCQP-----DVATYTCLLVGYGNAKQMDRVTAVLE 460
Query: 476 EMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
EM P +T ++ + ++M D A +I M K
Sbjct: 461 EMTQKGCPPDARTYNALIKLLTNRNMPDDAARIYKKMIK 499
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 88/216 (40%), Gaps = 11/216 (5%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y M++ K +MD EEM + + T ++ + A Q + +E+
Sbjct: 404 YTMLIRDHCKQGKMDMAMECFEEMQEAKCQPDVATYTCLLVGYGNAKQMDRVTAVLEEMT 463
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
G + T N L+ L + A ++ ++ K + P HT+N+ + + V
Sbjct: 464 QKGCPPDARTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYF----VG 519
Query: 255 EAQWTI-----QEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
++ + + +EM G P V SY+ I + R + Y+ ++EM +G +
Sbjct: 520 DSNYAMGCAVWEEMHQRGICPDVNSYTVFINGHIRHGRPEEAYKYIEEMINKGMKAPQID 579
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFF 345
Y + +K+G + + +K+K G S F
Sbjct: 580 YNKFAADFSKAGKPDILFELAQKVKFAGKLDVSNVF 615
>gi|449469288|ref|XP_004152353.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Cucumis sativus]
Length = 529
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 117/400 (29%), Positives = 202/400 (50%), Gaps = 11/400 (2%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM- 160
LV +++ R K+ SA F WA PG+E S + Y ++VDILG Q + L E+
Sbjct: 83 LVEQVLKRCKNIAFSAHRFFLWAKRIPGFEPSDDSYHIVVDILGSSGQFAILWDFLIEIR 142
Query: 161 -SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV 219
++ ++T V +S A +DA+R F+ +G FG+ + ++ LL TLCK V
Sbjct: 143 ETRSSVITHELFWHVFTAYSRADLPQDAIRAFNRMGEFGIRAGVDDLDKLLYTLCKRKHV 202
Query: 220 ELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
A+ F ++KS P+ T++I GW + + AQ EM+ GC V++Y++++
Sbjct: 203 AHAQQFFDKVKSVFNPSVKTYSILTRGWGVVGDSNNAQKVFDEMRERGCLIDVLAYNSLL 262
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
++ C+ + Y++ EM + G P+ TY+ + + D R+ E+ K
Sbjct: 263 EALCKGGKRDEAYKMFLEMDSNGVDPDADTYSIFIRSSCQENDLHTVYRVLERTKRKNLL 322
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQV--EMPENGVAPDTSTFNTMITMFSHHGHHEKA 397
P+ +NC+I L + V+EA YQ+ EM E GV PDT ++N + H A
Sbjct: 323 PNVFTYNCVIKKLCKDQNVEEA---YQILDEMIERGVTPDTWSYNAIQAYHCDHSEVNSA 379
Query: 398 FHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLV 457
++++ M++ + C P+ T++ +LK + G+ D +++ + M K ++TY ++
Sbjct: 380 LNLVKRMDR-DKCVPDKHTYNMVLKLLVRVGRFDRA-NEVWESM-GKRGFYPSVSTYAVM 436
Query: 458 IHGLCRAN-KCEWAYLLFKEMIGHDITPRYQTCRLILDEV 496
IHG C+ K E A F+ MI I P T L+ D +
Sbjct: 437 IHGFCKKKWKLEEACKYFEMMIDEGIPPYIATVELLRDRL 476
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 133/311 (42%), Gaps = 10/311 (3%)
Query: 130 YEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAV 188
+ S + Y ++ G V + + + +EM +G ++ + ++ G+ ++A
Sbjct: 216 FNPSVKTYSILTRGWGVVGDSNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAY 275
Query: 189 RTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGW 247
+ F E+ + G++ + +T ++ + + C+E + V K + PN T+N I
Sbjct: 276 KMFLEMDSNGVDPDADTYSIFIRSSCQENDLHTVYRVLERTKRKNLLPNVFTYNCVIKKL 335
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
CK V+EA + EM G P SY+ I +C + L+ M C P+
Sbjct: 336 CKDQNVEEAYQILDEMIERGVTPDTWSYNAIQAYHCDHSEVNSALNLVKRMDRDKCVPDK 395
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRAS-RVQEAVYVYQ 366
TY V+ L + G F+ A + E M G P + +I+ + +++EA ++
Sbjct: 396 HTYNMVLKLLVRVGRFDRANEVWESMGKRGFYPSVSTYAVMIHGFCKKKWKLEEACKYFE 455
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
+ M + G+ P +T + G ++ + ++M + C ++Q L+
Sbjct: 456 M-MIDEGIPPYIATVELLRDRLLGIGFKDQVAILGDKMKRSTSC--SIQELANLMSG--- 509
Query: 427 TGKTDECLSQL 437
GK E S L
Sbjct: 510 -GKRREAQSML 519
>gi|224133408|ref|XP_002321560.1| predicted protein [Populus trichocarpa]
gi|222868556|gb|EEF05687.1| predicted protein [Populus trichocarpa]
Length = 491
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 117/414 (28%), Positives = 206/414 (49%), Gaps = 8/414 (1%)
Query: 85 QSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDIL 144
Q+L Q IQ + LVN ++ R +D AL F P Y H Y+ +DI
Sbjct: 52 QALAQTLHSPTIQWTPQLVNTILKRLWNDGPKALQFFNLLSHHPSYSHHPSSYDHAIDIS 111
Query: 145 GKVRQMDQMRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNT 203
++R +R+L+ M + T T A + R++ AG+ AV+ F + FG ++
Sbjct: 112 ARLRDSPSLRSLVYRMRSARLGPTPKTFAIIAERYASAGKPHRAVKVFLSMHQFGCFQDL 171
Query: 204 ETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
++ N +LD LCK +VE+A ++F K + ++N+ ++GWC I R ++A ++EM
Sbjct: 172 QSFNTILDVLCKSKRVEMAYNLFKVFKGKFRADCVSYNVMVNGWCLIKRTNKALEMLKEM 231
Query: 264 KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF 323
G P + SY+T+++ Y R ++ ++ EM+ + C +V+TYTTV+ +G+
Sbjct: 232 VKRGLTPNLTSYNTMLKGYFRAGQINEAWDFFLEMKKRDCEIDVITYTTVIHGFGVAGEI 291
Query: 324 EEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNT 383
+ A ++ + M G P +N I L + V A+ +++ EM G P++ T+N
Sbjct: 292 KRARKVFDTMVKKGVLPSVATYNAFIQVLCKKDNVDNAIVIFE-EMVVKGYVPNSITYNL 350
Query: 384 MITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVN 443
+I H G E+A + M K + C+PNVQT++ +++ G+ D+ L L M +
Sbjct: 351 VIRGLCHRGEMERAMEFMGRM-KDDGCEPNVQTYNLVIRYFCDEGEIDKAL-DLFQKMTS 408
Query: 444 KHHLSLDITTYTLVIHGLCRANKCE---WAYLLFKEMIGHDITPRYQTCRLILD 494
L ++ TY ++I + K + A L EM+ PR T +L+
Sbjct: 409 GDCLP-NLDTYNILISAMFVRKKSDDLLVAGNLLIEMVDRGFVPRKFTFNRVLN 461
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 105/237 (44%), Gaps = 7/237 (2%)
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
HP SY I R + + L+ M++ P T+ + A +G A++
Sbjct: 100 HPS--SYDHAIDISARLRDSPSLRSLVYRMRSARLGPTPKTFAIIAERYASAGKPHRAVK 157
Query: 329 ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF 388
+ M G D + FN ++ L ++ RV+ A +++V + D ++N M+ +
Sbjct: 158 VFLSMHQFGCFQDLQSFNTILDVLCKSKRVEMAYNLFKVF--KGKFRADCVSYNVMVNGW 215
Query: 389 SHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
KA +L+EM K PN+ +++ +LK F+ G+ +E L+ + K
Sbjct: 216 CLIKRTNKALEMLKEMVK-RGLTPNLTSYNTMLKGYFRAGQINEAWDFFLE--MKKRDCE 272
Query: 449 LDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
+D+ TYT VIHG A + + A +F M+ + P T + + +K D A
Sbjct: 273 IDVITYTTVIHGFGVAGEIKRARKVFDTMVKKGVLPSVATYNAFIQVLCKKDNVDNA 329
>gi|449484422|ref|XP_004156879.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Cucumis sativus]
Length = 529
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 117/400 (29%), Positives = 202/400 (50%), Gaps = 11/400 (2%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM- 160
LV +++ R K+ SA F WA PG+E S + Y ++VDILG Q + L E+
Sbjct: 83 LVEQVLKRCKNIAFSAHRFFLWAKRIPGFEPSDDSYHIVVDILGGSGQFAILWDFLIEIR 142
Query: 161 -SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV 219
++ ++T V +S A +DA+R F+ +G FG+ + ++ LL TLCK V
Sbjct: 143 ETRSSVITHELFWHVFTAYSRADLPQDAIRAFNRMGEFGIRAGVDDLDKLLYTLCKRKHV 202
Query: 220 ELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
A+ F ++KS P+ T++I GW + + AQ EM+ GC V++Y++++
Sbjct: 203 AHAQQFFDKVKSVFNPSVKTYSILTRGWGVVGDSNNAQKVFDEMRERGCLIDVLAYNSLL 262
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
++ C+ + Y++ EM + G P+ TY+ + + D R+ E+ K
Sbjct: 263 EALCKGGKRDEAYKMFLEMDSNGVDPDADTYSIFIRSSCQENDLHTVYRVLERTKRKNLL 322
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQV--EMPENGVAPDTSTFNTMITMFSHHGHHEKA 397
P+ +NC+I L + V+EA YQ+ EM E GV PDT ++N + H A
Sbjct: 323 PNVFTYNCVIKKLCKDQNVEEA---YQILDEMIERGVTPDTWSYNAIQAYHCDHSEVNSA 379
Query: 398 FHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLV 457
++++ M++ + C P+ T++ +LK + G+ D +++ + M K ++TY ++
Sbjct: 380 LNLVKRMDR-DKCVPDKHTYNMVLKLLVRVGRFDRA-NEVWESM-GKRGFYPSVSTYAVM 436
Query: 458 IHGLCRAN-KCEWAYLLFKEMIGHDITPRYQTCRLILDEV 496
IHG C+ K E A F+ MI I P T L+ D +
Sbjct: 437 IHGFCKKKWKLEEACKYFEMMIDEGIPPYIATVELLRDRL 476
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 133/311 (42%), Gaps = 10/311 (3%)
Query: 130 YEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAV 188
+ S + Y ++ G V + + + +EM +G ++ + ++ G+ ++A
Sbjct: 216 FNPSVKTYSILTRGWGVVGDSNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAY 275
Query: 189 RTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGW 247
+ F E+ + G++ + +T ++ + + C+E + V K + PN T+N I
Sbjct: 276 KMFLEMDSNGVDPDADTYSIFIRSSCQENDLHTVYRVLERTKRKNLLPNVFTYNCVIKKL 335
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
CK V+EA + EM G P SY+ I +C + L+ M C P+
Sbjct: 336 CKDQNVEEAYQILDEMIERGVTPDTWSYNAIQAYHCDHSEVNSALNLVKRMDRDKCVPDK 395
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRAS-RVQEAVYVYQ 366
TY V+ L + G F+ A + E M G P + +I+ + +++EA ++
Sbjct: 396 HTYNMVLKLLVRVGRFDRANEVWESMGKRGFYPSVSTYAVMIHGFCKKKWKLEEACKYFE 455
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
+ M + G+ P +T + G ++ + ++M + C ++Q L+
Sbjct: 456 M-MIDEGIPPYIATVELLRDRLLGIGFKDQVAILGDKMKRSTSC--SIQELANLMSG--- 509
Query: 427 TGKTDECLSQL 437
GK E S L
Sbjct: 510 -GKRREAQSML 519
>gi|356561933|ref|XP_003549231.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g62470, mitochondrial-like [Glycine max]
Length = 510
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 116/384 (30%), Positives = 197/384 (51%), Gaps = 4/384 (1%)
Query: 95 AIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMR 154
++ SH LV ++ RFK K A F AG PG+ H S Y M+ +LG+ RQ + M
Sbjct: 61 GVRLSHDLVVDVLQRFKHARKPAFRFFCXAGKRPGFAHDSRTYNFMMCVLGRTRQFETMV 120
Query: 155 ALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLC 214
A LEEM + ++T+ T + ++ F+ A Q + V FD + +G + + +N LLD+L
Sbjct: 121 AKLEEMGEKGLLTMETFSIAIKAFAEAKQRKKEVGIFDLMKKYGFKVGVDVINFLLDSLS 180
Query: 215 KEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVIS 274
+ A++VF +LK P+ T+ I + GWC++ + EA EM G +P +++
Sbjct: 181 TAKLGKEAQAVFEKLKDRFTPSLQTYTILLSGWCRLKNLLEAGRVWNEMIDRGFNPDIVA 240
Query: 275 YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
++ +++ + S +L + M+A+G PNV +YT ++ K EAI + M
Sbjct: 241 HNVMLEGLLKCKKKSDAIKLFEIMKAKGPSPNVRSYTIMIQDFCKQKLMGEAIEYFDVMV 300
Query: 335 IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHH 394
G +PD+ + CLI GR ++ + VY EM E G PD T+N +I + +
Sbjct: 301 DRGCQPDAALYTCLITGFGRQKKM-DMVYSLLKEMRERGCPPDGRTYNALIKLMTSQHMP 359
Query: 395 EKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTY 454
+ A + ++M + KP + T++ ++KS F T K E ++ D+M K D +Y
Sbjct: 360 DDAVRIYKKMIQ-SGIKPTIHTYNMIMKSYFVT-KNYEMGHEIWDEMHPKGCCP-DDNSY 416
Query: 455 TLVIHGLCRANKCEWAYLLFKEMI 478
+ I GL R ++ A +EM+
Sbjct: 417 IVYIGGLIRQDRSGEACKYLEEML 440
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 105/238 (44%), Gaps = 7/238 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G+ + +M++ L K ++ L E M +KG + + +++ F +A
Sbjct: 233 GFNPDIVAHNVMLEGLLKCKKKSDAIKLFEIMKAKGPSPNVRSYTIMIQDFCKQKLMGEA 292
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK--SCIPPNAHTFNIFIH 245
+ FD + G + + L+ ++ K+++ S+ E++ C PP+ T+N I
Sbjct: 293 IEYFDVMVDRGCQPDAALYTCLITGFGRQKKMDMVYSLLKEMRERGC-PPDGRTYNALIK 351
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
+ D+A ++M G P + +Y+ I++SY N+ +E+ DEM +GC P
Sbjct: 352 LMTSQHMPDDAVRIYKKMIQSGIKPTIHTYNMIMKSYFVTKNYEMGHEIWDEMHPKGCCP 411
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP---DSRFFNCLIYTLGRASRVQE 360
+ +Y + L + EA + E+M G K D F I G A ++E
Sbjct: 412 DDNSYIVYIGGLIRQDRSGEACKYLEEMLEKGMKALKLDYNKFASDISKTGNAVILEE 469
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 134/336 (39%), Gaps = 19/336 (5%)
Query: 185 EDAVRTFDELGTFGLEKNTETM----------NLLLDTLCKEGKVELARSVFLELKSCIP 234
E + DEL F L++N E + +L++D L + F P
Sbjct: 37 ERVCKVIDEL--FALDRNMEVVLDECGVRLSHDLVVDVLQRFKHARKPAFRFFCXAGKRP 94
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI--SYSTIIQSYCRQYNFSKVY 292
AH + C + R + + + +++ G + ++S I+++ K
Sbjct: 95 GFAHDSRTYNFMMCVLGRTRQFETMVAKLEEMGEKGLLTMETFSIAIKAFAEAKQRKKEV 154
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
+ D M+ G V ++ L+ + +EA + EK+K + P + + L+
Sbjct: 155 GIFDLMKKYGFKVGVDVINFLLDSLSTAKLGKEAQAVFEKLKDRFT-PSLQTYTILLSGW 213
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
R + EA V+ EM + G PD N M+ A + E M K + P
Sbjct: 214 CRLKNLLEAGRVWN-EMIDRGFNPDIVAHNVMLEGLLKCKKKSDAIKLFEIM-KAKGPSP 271
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
NV+++ +++ K E + + D MV++ D YT +I G R K + Y
Sbjct: 272 NVRSYTIMIQDFCKQKLMGEAI-EYFDVMVDRG-CQPDAALYTCLITGFGRQKKMDMVYS 329
Query: 473 LFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
L KEM P +T ++ + +HM D A +I
Sbjct: 330 LLKEMRERGCPPDGRTYNALIKLMTSQHMPDDAVRI 365
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 80/210 (38%), Gaps = 35/210 (16%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G + + +Y ++ G+ ++MD + +LL+EM +G T +++ + +DA
Sbjct: 303 GCQPDAALYTCLITGFGRQKKMDMVYSLLKEMRERGCPPDGRTYNALIKLMTSQHMPDDA 362
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGW 247
VR + ++ ++S I P HT+N+ + +
Sbjct: 363 VRIYKKM----------------------------------IQSGIKPTIHTYNMIMKSY 388
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
+ EM GC P SY I RQ + + L+EM +G
Sbjct: 389 FVTKNYEMGHEIWDEMHPKGCCPDDNSYIVYIGGLIRQDRSGEACKYLEEMLEKGMKALK 448
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+ Y S ++K+G+ + KM VG
Sbjct: 449 LDYNKFASDISKTGNAVILEELARKMNFVG 478
>gi|242087579|ref|XP_002439622.1| hypothetical protein SORBIDRAFT_09g017100 [Sorghum bicolor]
gi|241944907|gb|EES18052.1| hypothetical protein SORBIDRAFT_09g017100 [Sorghum bicolor]
Length = 657
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 197/382 (51%), Gaps = 3/382 (0%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS 161
+V ++HRFK + + FRWA + G+ H++ Y M+ ILGK RQ + M A+++EM
Sbjct: 198 VVLAVLHRFKHAHRPSYRFFRWATASGGFTHTTITYCKMLHILGKTRQFEMMVAIIQEMG 257
Query: 162 KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVEL 221
K ++++ ++ F+ AG+ ++AV F+ + G + E+ N LL L EG
Sbjct: 258 KVGALSMDAFKVAIKSFAAAGEIKNAVGVFELMKKNGFDDGVESFNCLLVALANEGLGRE 317
Query: 222 ARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQS 281
AR VF ++ P+ ++ + WC + EA EM G P V+ ++T+I+
Sbjct: 318 ARQVFDKMHGQYSPDLRSYTALMLAWCNARNLVEAGRVWNEMLEKGMKPDVVVHNTMIEG 377
Query: 282 YCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPD 341
R + ++ + M+A+G PPNV TYT ++ K G + A+ E+M+ +PD
Sbjct: 378 LLRGQRRPEALKMFELMKAKGPPPNVWTYTMLIRDHCKRGKMDMAMECFEEMQEARCQPD 437
Query: 342 SRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVL 401
+ CL+ G A R+ V + EM + G PD T+N +I + ++ + A +
Sbjct: 438 VATYTCLLVGYGNAKRMDRVTAVLE-EMTQKGCPPDARTYNALIKLLTNRKMPDDAARIY 496
Query: 402 EEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGL 461
++M K + +P + T++ ++KS F G + + + + +++ + D+ +YT+ I+G
Sbjct: 497 KKMIK-KGLEPTIHTYNMMMKSYF-LGDRNYAMGCAVWEEMHRRGICPDVNSYTVFINGH 554
Query: 462 CRANKCEWAYLLFKEMIGHDIT 483
R + E AY +EMI +T
Sbjct: 555 IRHGRPEEAYKYIEEMINKGMT 576
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 129/296 (43%), Gaps = 5/296 (1%)
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQ 257
G T T +L L K + E+ ++ E+ + F + I + + A
Sbjct: 225 GFTHTTITYCKMLHILGKTRQFEMMVAIIQEMGKVGALSMDAFKVAIKSFAAAGEIKNAV 284
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
+ MK +G V S++ ++ + + + ++ D+M Q P++ +YT +M
Sbjct: 285 GVFELMKKNGFDDGVESFNCLLVALANEGLGREARQVFDKMHGQ-YSPDLRSYTALMLAW 343
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
+ + EA R+ +M G KPD N +I L R R EA+ ++++ M G P+
Sbjct: 344 CNARNLVEAGRVWNEMLEKGMKPDVVVHNTMIEGLLRGQRRPEALKMFEL-MKAKGPPPN 402
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
T+ +I G + A EEM + C+P+V T+ LL + K + ++ +
Sbjct: 403 VWTYTMLIRDHCKRGKMDMAMECFEEMQE-ARCQPDVATYTCLLVG-YGNAKRMDRVTAV 460
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
L++M K D TY +I L + A ++K+MI + P T +++
Sbjct: 461 LEEMTQKG-CPPDARTYNALIKLLTNRKMPDDAARIYKKMIKKGLEPTIHTYNMMM 515
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 116/279 (41%), Gaps = 12/279 (4%)
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
T+ +H K + + IQEM G + ++ I+S+ + + M
Sbjct: 232 TYCKMLHILGKTRQFEMMVAIIQEMGKVGAL-SMDAFKVAIKSFAAAGEIKNAVGVFELM 290
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRV 358
+ G V ++ ++ LA G EA ++ +KM S PD R + L+ A +
Sbjct: 291 KKNGFDDGVESFNCLLVALANEGLGREARQVFDKMHGQYS-PDLRSYTALMLAWCNARNL 349
Query: 359 QEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFH 418
EA V+ EM E G+ PD NTMI +A + E M K + PNV T+
Sbjct: 350 VEAGRVWN-EMLEKGMKPDVVVHNTMIEGLLRGQRRPEALKMFELM-KAKGPPPNVWTYT 407
Query: 419 PLLKSCFKTGKTD---ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFK 475
L++ K GK D EC ++ + D+ TYT ++ G A + + + +
Sbjct: 408 MLIRDHCKRGKMDMAMECFEEM-----QEARCQPDVATYTCLLVGYGNAKRMDRVTAVLE 462
Query: 476 EMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
EM P +T ++ + + M D A +I M K
Sbjct: 463 EMTQKGCPPDARTYNALIKLLTNRKMPDDAARIYKKMIK 501
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 87/214 (40%), Gaps = 7/214 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y M++ K +MD EEM + + T ++ + A + + +E+
Sbjct: 406 YTMLIRDHCKRGKMDMAMECFEEMQEARCQPDVATYTCLLVGYGNAKRMDRVTAVLEEMT 465
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINR-- 252
G + T N L+ L + A ++ ++ K + P HT+N+ + + +R
Sbjct: 466 QKGCPPDARTYNALIKLLTNRKMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGDRNY 525
Query: 253 -VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
+ A W +EM G P V SY+ I + R + Y+ ++EM +G + Y
Sbjct: 526 AMGCAVW--EEMHRRGICPDVNSYTVFINGHIRHGRPEEAYKYIEEMINKGMTAPQIDYN 583
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFF 345
+ +K+G + + K+K G S F
Sbjct: 584 KFAADFSKAGKPDILYELALKVKFAGKCDASNVF 617
>gi|15228767|ref|NP_191806.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181319|sp|Q9LZP3.1|PP293_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g62470, mitochondrial; Flags: Precursor
gi|7340718|emb|CAB82961.1| putative protein [Arabidopsis thaliana]
gi|34365579|gb|AAQ65101.1| At3g62470 [Arabidopsis thaliana]
gi|332646835|gb|AEE80356.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 599
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 129/459 (28%), Positives = 221/459 (48%), Gaps = 20/459 (4%)
Query: 25 FHSSSENCSHIVSSSPIESYCSDGARLDHHQVLCVDSPRLPD-----IDVIISKVHVGSS 79
F S S N S +ES C + + V CV+S P+ VI + +
Sbjct: 92 FSSGSSNVSDGCDEE-VESECDND---EETGVSCVESSTNPEEVERVCKVIDELFALDRN 147
Query: 80 EDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEM 139
+ V +K D SH L+ +++ RF+ K A F WA G+ H S Y
Sbjct: 148 MEAVLDEMKLDL-------SHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNS 200
Query: 140 MVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGL 199
M+ IL K RQ + M ++LEEM ++T+ T M+ F+ A + + AV F+ + +
Sbjct: 201 MMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKF 260
Query: 200 EKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWT 259
+ ET+N LLD+L + + A+ +F +LK PN T+ + ++GWC++ + EA
Sbjct: 261 KIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARI 320
Query: 260 IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK 319
+M G P +++++ +++ R S +L M+++G PNV +YT ++ K
Sbjct: 321 WNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCK 380
Query: 320 SGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTS 379
E AI + M G +PD+ + CLI G ++ + VY EM E G PD
Sbjct: 381 QSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKL-DTVYELLKEMQEKGHPPDGK 439
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLD 439
T+N +I + ++ E A + +M + E +P++ TF+ ++KS F + E + +
Sbjct: 440 TYNALIKLMANQKMPEHATRIYNKMIQNE-IEPSIHTFNMIMKSYF-MARNYEMGRAVWE 497
Query: 440 DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
+M+ K + D +YT++I GL K A +EM+
Sbjct: 498 EMIKK-GICPDDNSYTVLIRGLIGEGKSREACRYLEEML 535
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 86/385 (22%), Positives = 152/385 (39%), Gaps = 46/385 (11%)
Query: 126 SCPGYEHSSEIYEMMVDILGKVRQMDQ-MRALLEEMSKGHIVTLNTIAKVMRRFSGAGQW 184
SC + E E + ++ ++ +D+ M A+L+EM ++ + I +V+ RF A +
Sbjct: 120 SCVESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLD--LSHDLIVEVLERFRHARK- 176
Query: 185 EDAVRTFDELGTF-GLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIF 243
A R F G ++ T N ++ L K + E SV E+ + TF I
Sbjct: 177 -PAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIA 235
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
+ + +A + MK + V + + ++ S R + L D+++ +
Sbjct: 236 MKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-F 294
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
PN++TYT +++ + + EA RI M G KPD N ++ L R+ + +A+
Sbjct: 295 TPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIK 354
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
++ V M G P+ ++ MI F E A
Sbjct: 355 LFHV-MKSKGPCPNVRSYTIMIRDFCKQSSMETAI------------------------- 388
Query: 424 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
+ DDMV+ L D YT +I G K + Y L KEM
Sbjct: 389 ------------EYFDDMVDSG-LQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHP 435
Query: 484 PRYQTCRLILDEVKQKHMYDAAEKI 508
P +T ++ + + M + A +I
Sbjct: 436 PDGKTYNALIKLMANQKMPEHATRI 460
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 86/202 (42%), Gaps = 1/202 (0%)
Query: 139 MMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
M+ +L ++ D ++ SKG + + ++R F E A+ FD++ G
Sbjct: 339 MLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSG 398
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQ 257
L+ + L+ + K++ + E++ PP+ T+N I + A
Sbjct: 399 LQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHAT 458
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
+M + P + +++ I++SY N+ + +EM +G P+ +YT ++ L
Sbjct: 459 RIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGL 518
Query: 318 AKSGDFEEAIRITEKMKIVGSK 339
G EA R E+M G K
Sbjct: 519 IGEGKSREACRYLEEMLDKGMK 540
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 6/177 (3%)
Query: 337 GSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEK 396
G DSR +N ++ L + + + V V + EM G+ TF + F+ +K
Sbjct: 190 GFAHDSRTYNSMMSILAKTRQFETMVSVLE-EMGTKGLLT-METFTIAMKAFAAAKERKK 247
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTL 456
A + E M K + K V+T + LL S + E +Q+L D + K + ++ TYT+
Sbjct: 248 AVGIFELMKKYKF-KIGVETINCLLDSLGRAKLGKE--AQVLFDKL-KERFTPNMMTYTV 303
Query: 457 VIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
+++G CR A ++ +MI + P ++L+ + + A K+ VMK
Sbjct: 304 LLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMK 360
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 52/267 (19%), Positives = 100/267 (37%), Gaps = 10/267 (3%)
Query: 81 DEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMM 140
D + Q LK D V + + L L R K D + + G CP Y +M
Sbjct: 323 DMIDQGLKPDIVAHNVM----LEGLLRSRKKSDAIKLFHVMKSKGPCPNVRS----YTIM 374
Query: 141 VDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAV-RTFDELGTFGL 199
+ K M+ ++M + + + G + D V E+ G
Sbjct: 375 IRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGH 434
Query: 200 EKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQW 258
+ +T N L+ + + E A ++ ++ ++ I P+ HTFN+ + + + +
Sbjct: 435 PPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRA 494
Query: 259 TIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLA 318
+EM G P SY+ +I+ + + L+EM +G ++ Y +
Sbjct: 495 VWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFH 554
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRFF 345
+ G E + ++ K G + F
Sbjct: 555 RGGQPEIFEELAQRAKFSGKFAAAEIF 581
>gi|224085950|ref|XP_002307751.1| predicted protein [Populus trichocarpa]
gi|222857200|gb|EEE94747.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 194/383 (50%), Gaps = 6/383 (1%)
Query: 118 LGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVMR 176
L F WA + G+ S E Y MVD G+V D ++ M ++ VT+ T +MR
Sbjct: 78 LAFFNWASNQDGFRKSPEAYNEMVDFSGQVMMFDVAWYFIDLMKARNVDVTVETFLILMR 137
Query: 177 RFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPN 236
R+ AG +A+ F+ + + + + ++L+ LC+E + A+ F LK P+
Sbjct: 138 RYVRAGLAAEAIHAFNRMEDYNCKPDKIAFSILISILCRERRASQAQEFFDSLKDKFEPD 197
Query: 237 AHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLD 296
+ + GWC+ + EA+ EMK G P V +YS +I S CR ++ +++
Sbjct: 198 VIVYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVYTYSIVIDSLCRCGQITRAHDIFA 257
Query: 297 EMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRAS 356
EM GC PN +TY ++M K+G E+ +++ +MK +G +PD+ +N LI T +
Sbjct: 258 EMLDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMKRLGCEPDTVTYNFLIETHCKDE 317
Query: 357 RVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQT 416
+++A+ V + M + G AP+ STFNT+ + G A + ++M +L +C+ N T
Sbjct: 318 NLEDAIKVIGL-MAKKGCAPNASTFNTLFGCIAKLGDVNAAHRMYKKMKEL-NCEANTVT 375
Query: 417 FHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKE 476
++ L+K + TD L L ++++ + ++ TY ++I C AY F+E
Sbjct: 376 YNTLMKMFVASKSTDMVLK--LKTEMDENKIEPNVNTYKVLITMYCGMGHWNNAYKFFRE 433
Query: 477 MIGHD-ITPRYQTCRLILDEVKQ 498
MI + P ++L ++++
Sbjct: 434 MIDEKCLRPSLPVYDMVLQQLRK 456
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 158/307 (51%), Gaps = 5/307 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGT 196
+ +++ IL + R+ Q + + + + ++R + AG +A R F E+
Sbjct: 167 FSILISILCRERRASQAQEFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFGEMKV 226
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDE 255
G++ N T ++++D+LC+ G++ A +F E L + PN+ T+N + K R ++
Sbjct: 227 AGIKPNVYTYSIVIDSLCRCGQITRAHDIFAEMLDAGCQPNSITYNSLMRIHVKAGRTEK 286
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
+MK GC P ++Y+ +I+++C+ N +++ M +GC PN T+ T+
Sbjct: 287 VLQVYNQMKRLGCEPDTVTYNFLIETHCKDENLEDAIKVIGLMAKKGCAPNASTFNTLFG 346
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
+AK GD A R+ +KMK + + ++ +N L+ + AS+ + V + EM EN +
Sbjct: 347 CIAKLGDVNAAHRMYKKMKELNCEANTVTYNTLM-KMFVASKSTDMVLKLKTEMDENKIE 405
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG---KTDE 432
P+ +T+ +ITM+ GH A+ EM + +P++ + +L+ K G K +E
Sbjct: 406 PNVNTYKVLITMYCGMGHWNNAYKFFREMIDEKCLRPSLPVYDMVLQQLRKAGQLKKHEE 465
Query: 433 CLSQLLD 439
+ +++D
Sbjct: 466 LVEKMVD 472
>gi|224089100|ref|XP_002308636.1| predicted protein [Populus trichocarpa]
gi|222854612|gb|EEE92159.1| predicted protein [Populus trichocarpa]
Length = 607
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 117/429 (27%), Positives = 210/429 (48%), Gaps = 15/429 (3%)
Query: 95 AIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMR 154
I+P L+ + F K +F WA PG++ S+ ++ MV+ LGK R+
Sbjct: 108 GIEPELGLIQSVFDHFDSSPKLLHSVFLWAEKKPGFQSSAALFNSMVNFLGKAREFGSAW 167
Query: 155 ALLEEM----SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGL----EKNTETM 206
LL + G +V+ +T A ++RR++ AG E A+RTF+ + L E T
Sbjct: 168 CLLLDRIGGNEGGDLVSSDTFAILIRRYTRAGMSEAAIRTFEYASSLDLIHNSEAGTSLF 227
Query: 207 NLLLDTLCKEGKVELARSVF---LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
+LLD+LCKEG V +A F +E C P+ +NI ++GW + ++ A+ EM
Sbjct: 228 EILLDSLCKEGHVRVATDYFDRKVEKDPCWVPSVRIYNILLNGWFRSRKLKHAERLWLEM 287
Query: 264 KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF 323
K P V++Y T+++ Y R + EL+DEM+ +G N + Y ++ LA++G F
Sbjct: 288 KKKNVKPSVVTYGTLVEGYSRMRRVERAIELVDEMKREGIKSNAIVYNPIIDALAEAGRF 347
Query: 324 EEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNT 383
+E + + E + P +N L+ +A + A + ++ M V P +T+N
Sbjct: 348 KEVLGMMEHFFLCEEGPTISTYNSLVKGYCKAGDLVGASKILKM-MISREVFPTPTTYNY 406
Query: 384 MITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVN 443
FS E+ ++ +M + + P+ T+H LLK + + D L+ + +
Sbjct: 407 FFRHFSKCRKIEEGMNLYTKMIESGYT-PDRLTYHLLLKMLCEEERLD--LAVQISKEMR 463
Query: 444 KHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYD 503
+D+ T T+ H LC+ + E A+ F++M+ I P+Y T + DE +++ + +
Sbjct: 464 ARGCDMDLATSTMFTHLLCKMQRFEEAFAEFEDMLRRGIVPQYLTFHRLNDEFRKQGLTE 523
Query: 504 AAEKIEAVM 512
A ++ +M
Sbjct: 524 LARRLCKLM 532
>gi|226509960|ref|NP_001150456.1| LOC100284086 [Zea mays]
gi|195639404|gb|ACG39170.1| ATP binding protein [Zea mays]
Length = 634
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 195/377 (51%), Gaps = 3/377 (0%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS 161
+V ++HRFK + + FRWA G+ H++ Y M+ ILGK RQ + M A+++EM
Sbjct: 196 VVLAVLHRFKHAHRPSYRFFRWATVSGGFTHTTITYCKMLHILGKTRQFESMVAMIQEMG 255
Query: 162 KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVEL 221
K ++++ ++ F+ AG+ ++AV F+ + G + E+ N LL L KEG
Sbjct: 256 KAGALSMDAFKVAIKSFAAAGEIKNAVGVFELMRKNGFDDGVESFNCLLVALAKEGLGRE 315
Query: 222 ARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQS 281
AR VF ++ P+ ++ + WC + EA EM G P V+ ++T+I+
Sbjct: 316 ARQVFDKMHGQYSPDLRSYTALMLAWCNARNLVEAGRVWNEMLEKGMDPDVVVHNTMIEG 375
Query: 282 YCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPD 341
R + ++ + M+A+G PPNV TYT ++ K G + A+ E+M+ +PD
Sbjct: 376 LLRGQRRPEAVKMFELMKAKGPPPNVWTYTMLIRDHCKQGKMDMAMECFEEMQEAKCQPD 435
Query: 342 SRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVL 401
+ CL+ G A ++ V + EM + G PD T+N +I + ++ + A +
Sbjct: 436 VATYTCLLVGYGNAKQMDRVTAVLE-EMTQKGCPPDARTYNALIKLLTNRNMPDDAARIY 494
Query: 402 EEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGL 461
++M K + +P + T++ ++KS F G ++ + + + +++ + D+ +YT+ I+
Sbjct: 495 KKMIK-KGLEPTIHTYNMMMKSYF-VGDSNYAMGCAVWEEMHQRGICPDVNSYTVFINRH 552
Query: 462 CRANKCEWAYLLFKEMI 478
R + E AY +EMI
Sbjct: 553 IRHGRPEEAYKYIEEMI 569
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 130/296 (43%), Gaps = 5/296 (1%)
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQ 257
G T T +L L K + E ++ E+ + F + I + + A
Sbjct: 223 GFTHTTITYCKMLHILGKTRQFESMVAMIQEMGKAGALSMDAFKVAIKSFAAAGEIKNAV 282
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
+ M+ +G V S++ ++ + ++ + ++ D+M Q P++ +YT +M
Sbjct: 283 GVFELMRKNGFDDGVESFNCLLVALAKEGLGREARQVFDKMHGQ-YSPDLRSYTALMLAW 341
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
+ + EA R+ +M G PD N +I L R R EAV ++++ M G P+
Sbjct: 342 CNARNLVEAGRVWNEMLEKGMDPDVVVHNTMIEGLLRGQRRPEAVKMFEL-MKAKGPPPN 400
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
T+ +I G + A EEM + + C+P+V T+ LL + K + ++ +
Sbjct: 401 VWTYTMLIRDHCKQGKMDMAMECFEEMQEAK-CQPDVATYTCLLVG-YGNAKQMDRVTAV 458
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
L++M K D TY +I L N + A ++K+MI + P T +++
Sbjct: 459 LEEMTQKG-CPPDARTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMM 513
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 118/279 (42%), Gaps = 12/279 (4%)
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
T+ +H K + + IQEM G + ++ I+S+ + + M
Sbjct: 230 TYCKMLHILGKTRQFESMVAMIQEMGKAGAL-SMDAFKVAIKSFAAAGEIKNAVGVFELM 288
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRV 358
+ G V ++ ++ LAK G EA ++ +KM S PD R + L+ A +
Sbjct: 289 RKNGFDDGVESFNCLLVALAKEGLGREARQVFDKMHGQYS-PDLRSYTALMLAWCNARNL 347
Query: 359 QEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFH 418
EA V+ EM E G+ PD NTMI +A + E M K + PNV T+
Sbjct: 348 VEAGRVWN-EMLEKGMDPDVVVHNTMIEGLLRGQRRPEAVKMFELM-KAKGPPPNVWTYT 405
Query: 419 PLLKSCFKTGKTD---ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFK 475
L++ K GK D EC ++ + D+ TYT ++ G A + + + +
Sbjct: 406 MLIRDHCKQGKMDMAMECFEEMQEAKCQP-----DVATYTCLLVGYGNAKQMDRVTAVLE 460
Query: 476 EMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
EM P +T ++ + ++M D A +I M K
Sbjct: 461 EMTQKGCPPDARTYNALIKLLTNRNMPDDAARIYKKMIK 499
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 102/240 (42%), Gaps = 42/240 (17%)
Query: 156 LLEEMSKGHIVTLNTIAKVMRRFSGAGQWE-DAVRTFDELGTFGLEKNTETMNLLLDTLC 214
+LE+ +V NT+ + + R GQ +AV+ F+ + G N T +L+ C
Sbjct: 357 MLEKGMDPDVVVHNTMIEGLLR----GQRRPEAVKMFELMKAKGPPPNVWTYTMLIRDHC 412
Query: 215 KEGKVELARSVFLELK-----------SCI-------------------------PPNAH 238
K+GK+++A F E++ +C+ PP+A
Sbjct: 413 KQGKMDMAMECFEEMQEAKCQPDVATYTCLLVGYGNAKQMDRVTAVLEEMTQKGCPPDAR 472
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSY-CRQYNFSKVYELLDE 297
T+N I N D+A ++M G P + +Y+ +++SY N++ + +E
Sbjct: 473 TYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFVGDSNYAMGCAVWEE 532
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
M +G P+V +YT ++ + G EEA + E+M G K +N +A +
Sbjct: 533 MHQRGICPDVNSYTVFINRHIRHGRPEEAYKYIEEMINKGMKAPQIDYNKFAADFSKAGK 592
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 88/216 (40%), Gaps = 11/216 (5%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y M++ K +MD EEM + + T ++ + A Q + +E+
Sbjct: 404 YTMLIRDHCKQGKMDMAMECFEEMQEAKCQPDVATYTCLLVGYGNAKQMDRVTAVLEEMT 463
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
G + T N L+ L + A ++ ++ K + P HT+N+ + + V
Sbjct: 464 QKGCPPDARTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYF----VG 519
Query: 255 EAQWTI-----QEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
++ + + +EM G P V SY+ I + R + Y+ ++EM +G +
Sbjct: 520 DSNYAMGCAVWEEMHQRGICPDVNSYTVFINRHIRHGRPEEAYKYIEEMINKGMKAPQID 579
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFF 345
Y + +K+G + + +K+K G S F
Sbjct: 580 YNKFAADFSKAGKPDILFELAQKVKFAGKLDVSNVF 615
>gi|255568998|ref|XP_002525469.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535282|gb|EEF36959.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 581
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 130/435 (29%), Positives = 217/435 (49%), Gaps = 15/435 (3%)
Query: 55 QVLCVDSPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDW 114
Q+ D + D+ +I+S +H S + V K +H ++ S LV +++ R ++DW
Sbjct: 85 QLNLKDEGLVQDVTIIMSILHQLSG-NPVEMKNKIEHC--GVKVSRELVLEVLSRIRNDW 141
Query: 115 KSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM----SKGHIVTLNT 170
++A F WAG GY HS Y M+ ILGK+R+ D AL++EM + +VT T
Sbjct: 142 EAAFTFFLWAGRQLGYSHSVREYHAMISILGKMRKFDTAWALIDEMRGVKTGISLVTPQT 201
Query: 171 IAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK 230
+ ++R++ A+ TF F + + LL LC+ V+ A + K
Sbjct: 202 LLIMIRKYCAVHDVGRAINTFYAHKRFKFDLGIDEFQSLLSALCRYKNVQDAEHLMFCNK 261
Query: 231 SCIPPNAHTFNIFIHGWCK-INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFS 289
P N +FNI ++GWC I EA +EM H V+SY++II Y + N
Sbjct: 262 DVFPFNTKSFNIVLNGWCNVIGSPREADRIWREMCKRRIHYDVVSYASIISCYSKAGNLY 321
Query: 290 KVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
KV++L ++M+ G P+ Y +V+ LAK EAI + + M+ G P++ +N LI
Sbjct: 322 KVFKLYNQMKEVGIEPDRKIYNSVIFALAKGRHVSEAINLMKTMEEKGIAPNTVTYNSLI 381
Query: 350 YTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH 409
L RA ++ EA ++ EM ++G +P T++ F E+ F +LE M KL
Sbjct: 382 KPLCRARKIDEARGLFD-EMLQHGHSPTIRTYH---AFFRSLRTGEEVFALLENMRKL-G 436
Query: 410 CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEW 469
C P + T+ L++ + + D+ L + ++++ L D ++Y ++IHGL K E
Sbjct: 437 CHPTIDTYIMLIRKFCRWRQFDDVFK--LWNQISENGLGPDRSSYIVLIHGLFLNGKLEE 494
Query: 470 AYLLFKEMIGHDITP 484
AY + +M + P
Sbjct: 495 AYKFYADMKEKQLLP 509
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 12/224 (5%)
Query: 186 DAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFI 244
+A+ + G+ NT T N L+ LC+ K++ AR +F E L+ P T++ F
Sbjct: 357 EAINLMKTMEEKGIAPNTVTYNSLIKPLCRARKIDEARGLFDEMLQHGHSPTIRTYHAFF 416
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
+ +E ++ M+ GCHP + +Y +I+ +CR F V++L +++ G
Sbjct: 417 RS---LRTGEEVFALLENMRKLGCHPTIDTYIMLIRKFCRWRQFDDVFKLWNQISENGLG 473
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
P+ +Y ++ L +G EEA + MK PD + L L V
Sbjct: 474 PDRSSYIVLIHGLFLNGKLEEAYKFYADMKEKQLLPDPKLDEMLQTWLSNKQ-------V 526
Query: 365 YQVEMPENGVAP-DTSTFNTMITMFSHHGHHEKAFHVLEEMNKL 407
+ +M E+ V D S S +HEK F E+ ++
Sbjct: 527 AECQMTESKVDQLDCSRLGNQRRATSKRINHEKDFLQQAEIRRV 570
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 127/334 (38%), Gaps = 52/334 (15%)
Query: 163 GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG-TFGLEKNTETMNLLLDTLCKEGKVEL 221
G V+ + +V+ R WE A F G G + + ++ L K K +
Sbjct: 122 GVKVSRELVLEVLSRIRN--DWEAAFTFFLWAGRQLGYSHSVREYHAMISILGKMRKFDT 179
Query: 222 ARSVFLELK------SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISY 275
A ++ E++ S + P T I I +C ++ V A T K + +
Sbjct: 180 AWALIDEMRGVKTGISLVTP--QTLLIMIRKYCAVHDVGRAINTFYAHKRFKFDLGIDEF 237
Query: 276 STIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS-YLAKSGDFEEAIRITEKMK 334
+++ + CR N L+ P N ++ V++ + G EA RI +M
Sbjct: 238 QSLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSFNIVLNGWCNVIGSPREADRIWREMC 296
Query: 335 IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHH 394
D + +I +A + + +Y +M E G+ PD +N++I +
Sbjct: 297 KRRIHYDVVSYASIISCYSKAGNLYKVFKLYN-QMKEVGIEPDRKIYNSVIFALA----- 350
Query: 395 EKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTY 454
K HV E +N L+K+ + G ++ + TY
Sbjct: 351 -KGRHVSEAIN--------------LMKTMEEKG------------------IAPNTVTY 377
Query: 455 TLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+I LCRA K + A LF EM+ H +P +T
Sbjct: 378 NSLIKPLCRARKIDEARGLFDEMLQHGHSPTIRT 411
>gi|255565671|ref|XP_002523825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536913|gb|EEF38551.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 528
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 108/398 (27%), Positives = 199/398 (50%), Gaps = 6/398 (1%)
Query: 117 ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVM 175
AL F WA S PG+ H E Y M+D+ GKVR D +++ M ++ +++ T + ++
Sbjct: 125 ALSFFNWATSRPGFTHHPEPYNEMIDLAGKVRNFDLGWQVIDLMKARNVEISIETFSILI 184
Query: 176 RRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPP 235
RR+ AG +AV F+ + + + + ++L+ LC++ + A+S F LK P
Sbjct: 185 RRYVRAGLASEAVHAFNRMEDYNCKPDKIAFSILISILCRKRRATEAQSFFDSLKDKFEP 244
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
+ + + GWC+ + EA+ EMK GC P V +Y+ +I + CR ++ +++
Sbjct: 245 DVIVYTNLVRGWCRAGNIPEAERVFTEMKVAGCMPNVYTYTIVIDALCRCGQITRAHDVF 304
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
EM GC PN +T+ ++ K+G E+ +++ +MK +G PD+ +N LI + +
Sbjct: 305 AEMLDVGCEPNSITFNNLLRVHVKAGRTEKVLQVYNQMKRMGCPPDTVTYNFLIESHCKD 364
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQ 415
+ EA+ V M + G +P+ STFN + + A + +M +L+ CK N
Sbjct: 365 GNLDEALKVLN-SMVKKGCSPNASTFNGLFGSIAKLRDVNGAHRLYAKMKELK-CKANTV 422
Query: 416 TFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFK 475
T++ L++ T TD L L +++ + ++ TY ++I C AY F+
Sbjct: 423 TYNILMRMFVDTKSTDMVLK--LKKEMDEDDVEPNVNTYCVLIAMYCGMGHWNNAYKFFR 480
Query: 476 EMIGHD-ITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
EM+ + P +L ++++ E++ AVM
Sbjct: 481 EMVEEKCLKPSLPVYEKVLQQLRKAGQLKKHEELVAVM 518
>gi|357436823|ref|XP_003588687.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477735|gb|AES58938.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 587
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/440 (26%), Positives = 224/440 (50%), Gaps = 25/440 (5%)
Query: 86 SLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILG 145
SL + I+P+ L++ + F K ++ WA + PG++ S +++ +++ L
Sbjct: 90 SLLTNLTQTGIKPTPPLLHAVFDHFASSPKLLHSLYLWALNQPGFKPDSSLFDSVINALA 149
Query: 146 KVRQMDQMRALL------EEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGL 199
K+++ D +L+ ++ +V++ T A ++RR++ AG + A+RTF+ F
Sbjct: 150 KMKEFDDAWSLVLDRIRRDDDDDEKLVSVGTFAIIIRRYARAGMHKAAIRTFE----FAK 205
Query: 200 EKNT--------ETMNLLLDTLCKEGKVELARSVFLELKSC---IPPNAHTFNIFIHGWC 248
+K + +L+D+LCKEG A L K P+ +NI ++GW
Sbjct: 206 DKKSIVDSVSEMSLFEILIDSLCKEGSAREASEYLLRRKETDLGWVPSIRVYNIMLNGWF 265
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
+ ++ A+ +EMK P V++Y T+++ YCR K E++ EM +G PN +
Sbjct: 266 RARKLKHAERLWEEMKNENVRPSVVTYGTLVEGYCRMRRVEKALEMVGEMTKEGIKPNAI 325
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
Y ++ LA++G F+EA+ + E+ ++ P +N L+ +A ++ A + + +
Sbjct: 326 VYNPIIDALAEAGRFKEALGMMERFHVLQIGPTLSTYNSLVKGFCKAGDIEGASKILK-K 384
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M G P +T+N FS G ++ ++ +M + H P+ T+H +LK +
Sbjct: 385 MISRGFLPIPTTYNYFFRYFSRCGKVDEGMNLYTKMIESGH-NPDRLTYHLVLKMLCEEE 443
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
K E Q+ +M +K + +D+ T T++ H LC+ +K E A+ F++MI I P+Y T
Sbjct: 444 KL-ELAVQVSMEMRHKGY-DMDLATSTMLTHLLCKMHKLEEAFAEFEDMIRRGIIPQYLT 501
Query: 489 CRLILDEVKQKHMYDAAEKI 508
+ + E+K++ M + A K+
Sbjct: 502 FQKLNVELKKQGMNEMARKL 521
>gi|356517665|ref|XP_003527507.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Glycine max]
Length = 564
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 201/395 (50%), Gaps = 14/395 (3%)
Query: 94 NAIQPSHYLVNKLIHRFKDD---------WKSALGIFRWAGSCPGYEHSSEIYEMMVDIL 144
+AI +H + + HR + + +L F W+ S G+ S E Y M+D+
Sbjct: 129 SAISAAHPISPSVAHRVIEKCGGVRHGIPFLQSLAFFNWSSSLDGFPASPEPYNEMLDLA 188
Query: 145 GKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNT 203
GK+RQ D +++ M S+G +T++T + ++RR+ AG +AV F+ + +G +
Sbjct: 189 GKLRQFDLAWHVIDLMKSRGVEITVHTFSALVRRYVRAGLAAEAVHAFNRMEDYGCTPDM 248
Query: 204 ETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
++++ +LCK+ + A+S F LK P+ + +HGWC+ + +A+ +M
Sbjct: 249 VAFSIVISSLCKKRRANEAQSFFDSLKHRFEPDVVVYTSLVHGWCRAGDISKAEEVFSDM 308
Query: 264 KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF 323
K G P V +YS +I S CR ++ +++ EM GC PN VT+ ++M K+G
Sbjct: 309 KMAGIKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRT 368
Query: 324 EEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNT 383
E+ +++ +MK +G D+ +N +I + R ++EA + + M + GVAP+ STFN
Sbjct: 369 EKVLKVYNQMKRLGCPADTISYNFIIESHCRDENLEEAAKILNL-MVKKGVAPNASTFNF 427
Query: 384 MITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVN 443
+ + A + M +L +C+PN T++ L++ ++ TD L + ++
Sbjct: 428 IFGCIAKLHDVNGAHRMYARMKEL-NCQPNTLTYNILMRMFAESRSTDMVLK--MKKEMD 484
Query: 444 KHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
+ + ++ TY ++I C AY L EM+
Sbjct: 485 ESQVEPNVNTYRILISMFCDMKHWNNAYKLMMEMV 519
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 155/309 (50%), Gaps = 3/309 (0%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGT 196
+ +++ L K R+ ++ ++ + + + ++ + AG A F ++
Sbjct: 251 FSIVISSLCKKRRANEAQSFFDSLKHRFEPDVVVYTSLVHGWCRAGDISKAEEVFSDMKM 310
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDE 255
G++ N T ++++D+LC+ G++ A VF E+ + PNA TFN + K R ++
Sbjct: 311 AGIKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEK 370
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
+MK GC ISY+ II+S+CR N + ++L+ M +G PN T+ +
Sbjct: 371 VLKVYNQMKRLGCPADTISYNFIIESHCRDENLEEAAKILNLMVKKGVAPNASTFNFIFG 430
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
+AK D A R+ +MK + +P++ +N L+ SR + V + EM E+ V
Sbjct: 431 CIAKLHDVNGAHRMYARMKELNCQPNTLTYNILMRMFAE-SRSTDMVLKMKKEMDESQVE 489
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS 435
P+ +T+ +I+MF H A+ ++ EM + + +PN+ + +L+ K G+ +
Sbjct: 490 PNVNTYRILISMFCDMKHWNNAYKLMMEMVEEKCLRPNLSVYETVLELLRKAGQLKKH-E 548
Query: 436 QLLDDMVNK 444
+L+D MV +
Sbjct: 549 ELVDKMVAR 557
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 66/152 (43%), Gaps = 5/152 (3%)
Query: 345 FNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
+N ++ G+ + A +V + M GV TF+ ++ + G +A H M
Sbjct: 181 YNEMLDLAGKLRQFDLAWHVIDL-MKSRGVEITVHTFSALVRRYVRAGLAAEAVHAFNRM 239
Query: 405 NKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRA 464
C P++ F ++ S K + +E S D + KH D+ YT ++HG CRA
Sbjct: 240 EDY-GCTPDMVAFSIVISSLCKKRRANEAQS-FFDSL--KHRFEPDVVVYTSLVHGWCRA 295
Query: 465 NKCEWAYLLFKEMIGHDITPRYQTCRLILDEV 496
A +F +M I P T +++D +
Sbjct: 296 GDISKAEEVFSDMKMAGIKPNVYTYSIVIDSL 327
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 84/205 (40%), Gaps = 42/205 (20%)
Query: 284 RQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSR 343
RQ++ + + ++D M+++G V T++ ++ ++G EA+ +M+ G PD
Sbjct: 192 RQFDLA--WHVIDLMKSRGVEITVHTFSALVRRYVRAGLAAEAVHAFNRMEDYGCTPDMV 249
Query: 344 FFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEE 403
F+ +I +L + R EA + + ++ PD + +++ + G KA V +
Sbjct: 250 AFSIVISSLCKKRRANEAQSFF--DSLKHRFEPDVVVYTSLVHGWCRAGDISKAEEVFSD 307
Query: 404 MNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCR 463
M K+ KPNV T Y++VI LCR
Sbjct: 308 M-KMAGIKPNVYT-------------------------------------YSIVIDSLCR 329
Query: 464 ANKCEWAYLLFKEMIGHDITPRYQT 488
+ A+ +F EMI P T
Sbjct: 330 CGQITRAHDVFSEMIDAGCDPNAVT 354
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 55/118 (46%), Gaps = 2/118 (1%)
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIH 245
A R + + + NT T N+L+ + ++ + E+ +S + PN +T+ I I
Sbjct: 441 AHRMYARMKELNCQPNTLTYNILMRMFAESRSTDMVLKMKKEMDESQVEPNVNTYRILIS 500
Query: 246 GWCKINRVDEAQWTIQEMKGHGC-HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
+C + + A + EM C P + Y T+++ + K EL+D+M A+G
Sbjct: 501 MFCDMKHWNNAYKLMMEMVEEKCLRPNLSVYETVLELLRKAGQLKKHEELVDKMVARG 558
>gi|227463004|gb|ACP39954.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463006|gb|ACP39955.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 547
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 124/443 (27%), Positives = 214/443 (48%), Gaps = 21/443 (4%)
Query: 74 VHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHS 133
H GS D++ + +I+ S LV +++ R + AL F WA G++++
Sbjct: 104 THSGSHADKLLEDA-------SIKVSPSLVVEVLKRLSNAGVIALSFFTWAEKQKGFKYN 156
Query: 134 SEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDE 193
+E Y +++ LGK++Q +R+L+ EM ++ +T A + RR + A + E+A+ F+
Sbjct: 157 TESYNALIEALGKIKQFKLIRSLVNEMKSRKLLNKDTFALISRRHARARKVEEAIEAFER 216
Query: 194 LGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCK--- 249
+ FG + T N LLDTLCK VE A VF ++K P+ ++ I + GW K
Sbjct: 217 MEEFGFKLETSDFNRLLDTLCKSRHVEKANKVFDKMKKRRFVPDIKSYTILLEGWGKEHN 276
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
+ R+DE EMK G P V++Y +I +YC+ + EL EM+A+ C P
Sbjct: 277 LLRLDEVYL---EMKYDGFEPDVVTYGILISAYCKAKKYDAAIELFHEMEAKNCKPTPHV 333
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM 369
Y T+++ L EA+ E+ K G P++ +N L+ + R+ +A V EM
Sbjct: 334 YCTLINGLGSEKRLSEALEFFERFKSCGFTPEAPTYNSLVGAYCWSMRIDDAFQVID-EM 392
Query: 370 PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
++ P++ T++ ++ +A+ ++M+ C+P V T+ +++ +
Sbjct: 393 RKHSAGPNSRTYDIILHHLIKARRTNEAYFRFQKMSNEPGCEPTVSTYEIIVRMFCNEDR 452
Query: 430 TDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTC 489
D Q+ D M K L + Y+ +I LC NK A F+EM+ I P +
Sbjct: 453 VD-LAKQVWDQMKAKGVLP-GMHMYSDLITSLCHKNKLGEACKYFQEMLDAGIRPPAKMF 510
Query: 490 ----RLILDEVKQKHMYDAAEKI 508
+ +LDE K + A KI
Sbjct: 511 SNLKQALLDEGKNDEALNLARKI 533
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 110/267 (41%), Gaps = 14/267 (5%)
Query: 81 DEVFQSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRW--AGSCPGYEHSSEI 136
DEV+ +K D +P LI + + +A+ +F A +C H +
Sbjct: 281 DEVYLEMKYD----GFEPDVVTYGILISAYCKAKKYDAAIELFHEMEAKNCKPTPH---V 333
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +++ LG +++ + E S G T ++ + + + +DA + DE+
Sbjct: 334 YCTLINGLGSEKRLSEALEFFERFKSCGFTPEAPTYNSLVGAYCWSMRIDDAFQVIDEMR 393
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS--CIPPNAHTFNIFIHGWCKINRV 253
N+ T +++L L K + A F ++ + P T+ I + +C +RV
Sbjct: 394 KHSAGPNSRTYDIILHHLIKARRTNEAYFRFQKMSNEPGCEPTVSTYEIIVRMFCNEDRV 453
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
D A+ +MK G P + YS +I S C + + + EM G P ++ +
Sbjct: 454 DLAKQVWDQMKAKGVLPGMHMYSDLITSLCHKNKLGEACKYFQEMLDAGIRPPAKMFSNL 513
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKP 340
L G +EA+ + K+ + P
Sbjct: 514 KQALLDEGKNDEALNLARKINKLRGTP 540
>gi|357467093|ref|XP_003603831.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492879|gb|AES74082.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 530
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 192/363 (52%), Gaps = 5/363 (1%)
Query: 117 ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVM 175
+L F WA + G+ S E Y M+D+ GK+R D L++ M S+G +T++T + ++
Sbjct: 126 SLAFFNWATTLEGFPSSPEPYNEMIDLAGKLRHFDLAWHLIDLMKSRGVRITVSTFSVLV 185
Query: 176 RRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPP 235
RR+ AG +AV F+ + +G + + + ++++ +LCK+ + A F LK P
Sbjct: 186 RRYVRAGLAAEAVHAFNRMEDYGCKPDKVSFSIVISSLCKKRRASEAELFFDSLKHKFEP 245
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
+ + +HGWC+ + +A+ +MK G P V +YS +I S CR ++ +++
Sbjct: 246 DVIVYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCGQITRAHDVF 305
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
EM GC PN VT+ ++M K+G E+ +++ +MK +G D+ +N LI + +
Sbjct: 306 SEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYNFLIESHCKD 365
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQ 415
+ EAV V M + GVAP+ STFN++ + A + +M +L+ C PN
Sbjct: 366 ENLDEAVKVLDT-MVKKGVAPNASTFNSIFGCIAELHDVNGAHRMYAKMKELK-CMPNTL 423
Query: 416 TFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFK 475
T++ L++ F K+ + + +L +M ++ + ++ TY ++I C AY L K
Sbjct: 424 TYNILMR-MFADSKSIDMVLKLKKEM-DESEVEPNVNTYRILILMFCEKGHWNNAYNLMK 481
Query: 476 EMI 478
EM+
Sbjct: 482 EMV 484
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 140/269 (52%), Gaps = 3/269 (1%)
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHT 239
AG A F ++ G++ N T ++++D+LC+ G++ A VF E+ + PNA T
Sbjct: 260 AGDIAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVT 319
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
FN + K R ++ +MK GC ISY+ +I+S+C+ N + ++LD M
Sbjct: 320 FNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYNFLIESHCKDENLDEAVKVLDTMV 379
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
+G PN T+ ++ +A+ D A R+ KMK + P++ +N L+ + +
Sbjct: 380 KKGVAPNASTFNSIFGCIAELHDVNGAHRMYAKMKELKCMPNTLTYNILMRMFADSKSI- 438
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
+ V + EM E+ V P+ +T+ +I MF GH A+++++EM + + KPN+ +
Sbjct: 439 DMVLKLKKEMDESEVEPNVNTYRILILMFCEKGHWNNAYNLMKEMVEEKCLKPNLSIYET 498
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
+L+ G+ + +L++ MV + +S
Sbjct: 499 VLELLRNAGQLKK-HEELVEKMVARGFVS 526
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 86/214 (40%), Gaps = 40/214 (18%)
Query: 275 YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
Y+ +I + +F + L+D M+++G V T++ ++ ++G EA+ +M+
Sbjct: 146 YNEMIDLAGKLRHFDLAWHLIDLMKSRGVRITVSTFSVLVRRYVRAGLAAEAVHAFNRME 205
Query: 335 IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHH 394
G KPD F+ +I +L + R EA + + ++ PD + +++ + G
Sbjct: 206 DYGCKPDKVSFSIVISSLCKKRRASEAELFF--DSLKHKFEPDVIVYTSLVHGWCRAGDI 263
Query: 395 EKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTY 454
KA V +M K KPNV T Y
Sbjct: 264 AKAEEVFSDM-KEAGVKPNVYT-------------------------------------Y 285
Query: 455 TLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
++VI LCR + A+ +F EMI P T
Sbjct: 286 SIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVT 319
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 4/128 (3%)
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M GV STF+ ++ + G +A H M CKP+ +F ++ S K
Sbjct: 169 MKSRGVRITVSTFSVLVRRYVRAGLAAEAVHAFNRMEDY-GCKPDKVSFSIVISSLCKKR 227
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ E ++L D + KH D+ YT ++HG CRA A +F +M + P T
Sbjct: 228 RASE--AELFFDSL-KHKFEPDVIVYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNVYT 284
Query: 489 CRLILDEV 496
+++D +
Sbjct: 285 YSIVIDSL 292
>gi|357129397|ref|XP_003566348.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Brachypodium distachyon]
Length = 649
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 112/422 (26%), Positives = 211/422 (50%), Gaps = 9/422 (2%)
Query: 94 NAIQP--SHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMD 151
+A+ P S LV ++ RFK + + F+WA + +EH+ Y M+ ILGK RQ +
Sbjct: 196 SALSPPLSEALVLAVLDRFKHAHRPSRRFFQWAAASDEFEHTPVTYCKMLHILGKARQFE 255
Query: 152 QMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLD 211
M AL++EM K + ++ ++ F+ AG+ ++AV F+ + G + E+ N LL
Sbjct: 256 TMVALVQEMGKAGALCMDAFKIAIKSFAAAGEIKNAVGVFEMMRVHGFDDGVESFNCLLV 315
Query: 212 TLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPC 271
L +EG + A VF ++ P+ ++ + WC + EA +M G P
Sbjct: 316 ALAQEGLGKEAARVFDRMRDQYTPDLRSYTALMLAWCNARNLVEAGRVWNDMLEKGMKPD 375
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
V+ ++T+I R + ++ + M+A+G PPNV TYT ++ K G + A+R E
Sbjct: 376 VVVHNTMIDGLLRGQRRPEAVKMFELMKAKGPPPNVWTYTMLIRDHCKQGKLDMAMRCFE 435
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHH 391
+M++ G +P+ + CL+ G A R+ + + EM + G PD T+N +I + ++
Sbjct: 436 EMQVAGCQPEVATYTCLLVGYGNAKRMDRVTAMLE-EMAQKGCPPDGRTYNALIKLLTNR 494
Query: 392 GHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDI 451
+ A + ++M + +P + T++ ++KS F G+ + ++M ++ + D+
Sbjct: 495 NMPDDAVRIYKKMIT-KGLEPTIHTYNMMMKSYFLGGRNYAMGCAVWEEM-HRKGICPDV 552
Query: 452 TTYTLVIHGLCRANKCEWAYLLFKEMIGHDI-TPRYQTCRLILDEVKQKH---MYDAAEK 507
+YT+ I+G R + A +EMI + P+ + D K +Y+ A+K
Sbjct: 553 NSYTVFINGHIRHGRPAEACKFLEEMIQKGMKAPQIDYNKFAADFSKAGKPDILYELAQK 612
Query: 508 IE 509
++
Sbjct: 613 VK 614
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 108/293 (36%), Gaps = 57/293 (19%)
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
T+ +H K + + +QEM G C+ ++ I+S+ + + M
Sbjct: 240 TYCKMLHILGKARQFETMVALVQEMGKAGAL-CMDAFKIAIKSFAAAGEIKNAVGVFEMM 298
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRV 358
+ G V ++ ++ LA+ G +EA R+ ++M+ + PD R + L+ A +
Sbjct: 299 RVHGFDDGVESFNCLLVALAQEGLGKEAARVFDRMRDQYT-PDLRSYTALMLAWCNARNL 357
Query: 359 QEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFH 418
EA V+ +M E G+ PD NTMI +A + E M K + PNV T
Sbjct: 358 VEAGRVWN-DMLEKGMKPDVVVHNTMIDGLLRGQRRPEAVKMFELM-KAKGPPPNVWT-- 413
Query: 419 PLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM- 477
YT++I C+ K + A F+EM
Sbjct: 414 -----------------------------------YTMLIRDHCKQGKLDMAMRCFEEMQ 438
Query: 478 ---------------IGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
+G+ R +L+E+ QK A++K L
Sbjct: 439 VAGCQPEVATYTCLLVGYGNAKRMDRVTAMLEEMAQKGCPPDGRTYNALIKLL 491
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 87/218 (39%), Gaps = 34/218 (15%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDA 187
G + Y ++ G ++MD++ A+LEEM+ KG T +++ + +DA
Sbjct: 441 GCQPEVATYTCLLVGYGNAKRMDRVTAMLEEMAQKGCPPDGRTYNALIKLLTNRNMPDDA 500
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGW 247
VR + ++ T GLE T N+++ +S FL + + W
Sbjct: 501 VRIYKKMITKGLEPTIHTYNMMM------------KSYFL--------GGRNYAMGCAVW 540
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
+EM G P V SY+ I + R ++ + L+EM +G
Sbjct: 541 -------------EEMHRKGICPDVNSYTVFINGHIRHGRPAEACKFLEEMIQKGMKAPQ 587
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFF 345
+ Y + +K+G + + +K+K G S F
Sbjct: 588 IDYNKFAADFSKAGKPDILYELAQKVKFTGKFDVSNVF 625
>gi|147862837|emb|CAN78368.1| hypothetical protein VITISV_028672 [Vitis vinifera]
Length = 927
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/386 (29%), Positives = 200/386 (51%), Gaps = 5/386 (1%)
Query: 93 CNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQ 152
CN + SH LV ++ RFK K A F WAG G+ H+S Y M+ +LG+ RQ +
Sbjct: 229 CN-VDLSHALVVGVLERFKHARKPAFRFFCWAGQKAGFTHNSRTYNAMMSVLGRTRQFES 287
Query: 153 MRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDT 212
M +L EM + ++T+ T + ++ F+ A + + AV F+ + + + +T+N LLD
Sbjct: 288 MMGMLGEMGEKGLLTMETFSIAIKAFAAAKERKKAVGVFELMKRYNFDAGVDTINCLLDN 347
Query: 213 LCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCV 272
L + + A+++F +L+ PN T+ + ++GWC+I + EA T EM G P +
Sbjct: 348 LGRAKLGKEAQALFEKLEDRFTPNLRTYTVLLNGWCRIKNLVEAGRTWNEMIDKGFKPDI 407
Query: 273 ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEK 332
I++ T+++ + S +L + M+A+G PNV TYT ++ L K +EA+ ++
Sbjct: 408 IAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPSPNVRTYTILIRDLCKQMKMKEAVEYFDE 467
Query: 333 MKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
M G +PD+ + CLI G ++ + VY EM E G D T+N +I + ++
Sbjct: 468 MVDSGCQPDAAVYTCLITGFGNQKKM-DKVYALLKEMKEKGCPADGRTYNALIKLMTNRQ 526
Query: 393 HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
+ A + ++M + +P + T++ ++KS F T + E + +M K D
Sbjct: 527 MPDDAVRIYKKMIQ-NGIQPTLHTYNMMMKSYFYT-RNYEMGCAVWKEMGRK-GCCPDDN 583
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMI 478
+Y + I GL R + E A +EMI
Sbjct: 584 SYIVFIGGLIRHGRSEEACRYLEEMI 609
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 99/231 (42%), Gaps = 2/231 (0%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G++ + M++ L K ++ L E M +KG + T ++R + ++A
Sbjct: 402 GFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPSPNVRTYTILIRDLCKQMKMKEA 461
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHG 246
V FDE+ G + + L+ + K++ ++ E+K P + T+N I
Sbjct: 462 VEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDKVYALLKEMKEKGCPADGRTYNALIKL 521
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
D+A ++M +G P + +Y+ +++SY N+ + EM +GC P+
Sbjct: 522 MTNRQMPDDAVRIYKKMIQNGIQPTLHTYNMMMKSYFYTRNYEMGCAVWKEMGRKGCCPD 581
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
+Y + L + G EEA R E+M G K +N RA +
Sbjct: 582 DNSYIVFIGGLIRHGRSEEACRYLEEMIEKGMKAPQLDYNKFAADFSRAGK 632
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 111/244 (45%), Gaps = 13/244 (5%)
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
+Y+ ++ R F + +L EM +G + T++ + A + + ++A+ + E M
Sbjct: 271 TYNAMMSVLGRTRQFESMMGMLGEMGEKGLL-TMETFSIAIKAFAAAKERKKAVGVFELM 329
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
K NCL+ LGRA +EA ++ E E+ P+ T+ ++ + +
Sbjct: 330 KRYNFDAGVDTINCLLDNLGRAKLGKEAQALF--EKLEDRFTPNLRTYTVLLNGWCRIKN 387
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
+A EM + KP++ H +L+ K K + + L +++ S ++ T
Sbjct: 388 LVEAGRTWNEMID-KGFKPDIIAHHTMLEGLLKCKKKSDAIK--LFEVMKAKGPSPNVRT 444
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ--TCRLILDEVKQKHMYDAAEKIEAV 511
YT++I LC+ K + A F EM+ P TC LI QK M +K+ A+
Sbjct: 445 YTILIRDLCKQMKMKEAVEYFDEMVDSGCQPDAAVYTC-LITGFGNQKKM----DKVYAL 499
Query: 512 MKKL 515
+K++
Sbjct: 500 LKEM 503
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 85/177 (48%), Gaps = 4/177 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDA 187
G + + +Y ++ G ++MD++ ALL+EM KG T +++ + +DA
Sbjct: 472 GCQPDAAVYTCLITGFGNQKKMDKVYALLKEMKEKGCPADGRTYNALIKLMTNRQMPDDA 531
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIH 245
VR + ++ G++ T N+++ + E+ +V+ E+ K C P + +++ +FI
Sbjct: 532 VRIYKKMIQNGIQPTLHTYNMMMKSYFYTRNYEMGCAVWKEMGRKGCCP-DDNSYIVFIG 590
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
G + R +EA ++EM G + Y+ + R + EL +M+ +G
Sbjct: 591 GLIRHGRSEEACRYLEEMIEKGMKAPQLDYNKFAADFSRAGKPDILEELARKMKFEG 647
>gi|356560394|ref|XP_003548477.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Glycine max]
Length = 612
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 129/448 (28%), Positives = 212/448 (47%), Gaps = 17/448 (3%)
Query: 66 DIDVIISKVH-VGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWA 124
D+ I++ +H VGS ++ Q L +H + P LV +++ R ++DW++A F WA
Sbjct: 127 DVKTILAIMHEVGSGPSQIKQKL--EHCSIVLSPE--LVVEVLSRTRNDWEAAFTFFLWA 182
Query: 125 GSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGH----IVTLNTIAKVMRRFSG 180
G PGY HS Y M+ ILGK+R+ D L+EEM G +VT T+ ++R++
Sbjct: 183 GKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEEMRGGRNGLSLVTPQTLLIMIRKYCA 242
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTF 240
A+ TF F E + LL LC+ V+ A + K P + +F
Sbjct: 243 VHDVARAINTFYAYKRFNFRVGLEEFHSLLSALCRYKNVQDAEYLLFCNKDVFPLDTKSF 302
Query: 241 NIFIHGWCK-INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
NI ++GWC I A+ EM V+SY +II Y + KV + DEM+
Sbjct: 303 NIILNGWCNLIVSTSHAERIWHEMIKRRIQHDVVSYGSIISCYSKSSKLYKVLRMFDEMK 362
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
+ P+ Y V+ LAK +EA+ + M+ PD +N LI L +A +V
Sbjct: 363 KRKITPDRKVYNAVIYALAKGRLVKEAVNLIGTMEGNDVTPDVVTYNSLIKPLCKAHKVD 422
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
EA ++ EM + ++P TF+ + E+ F +L++M +L C P ++T+
Sbjct: 423 EAKQLFD-EMLKRHLSPTIQTFHAFFRILR---TKEEVFELLDKMKEL-RCYPTIETYIM 477
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
L++ + + D+ + D + + +S D ++Y ++IHGL K E A + EM
Sbjct: 478 LIRKFCRWCQLDDVFK--IWDAMREDEISHDRSSYIVLIHGLFLNGKLEEAQRYYAEMQE 535
Query: 480 HDITPRYQTCRLILDEVKQKHMYDAAEK 507
P +T ++ V K + EK
Sbjct: 536 KGFLPEPKTEEMLQAWVSGKQATEGQEK 563
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 110/253 (43%), Gaps = 17/253 (6%)
Query: 264 KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK---S 320
K G V Y ++I + F + L++EM+ ++VT T++ + K
Sbjct: 184 KQPGYAHSVREYHSMISILGKMRKFDTAWNLIEEMRGGRNGLSLVTPQTLLIMIRKYCAV 243
Query: 321 GDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP-DTS 379
D AI K + F+ L+ L R VQ+A Y+ V P DT
Sbjct: 244 HDVARAINTFYAYKRFNFRVGLEEFHSLLSALCRYKNVQDAEYLL---FCNKDVFPLDTK 300
Query: 380 TFNTMIT----MFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS 435
+FN ++ + H E+ +H + + +++H +V ++ ++ K+ K + L
Sbjct: 301 SFNIILNGWCNLIVSTSHAERIWHEMIK-RRIQH---DVVSYGSIISCYSKSSKLYKVL- 355
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE 495
++ D+M K ++ D Y VI+ L + + A L M G+D+TP T ++
Sbjct: 356 RMFDEM-KKRKITPDRKVYNAVIYALAKGRLVKEAVNLIGTMEGNDVTPDVVTYNSLIKP 414
Query: 496 VKQKHMYDAAEKI 508
+ + H D A+++
Sbjct: 415 LCKAHKVDEAKQL 427
>gi|115463377|ref|NP_001055288.1| Os05g0355200 [Oryza sativa Japonica Group]
gi|55168028|gb|AAV43896.1| unknown protein [Oryza sativa Japonica Group]
gi|55168069|gb|AAV43937.1| unknown protein [Oryza sativa Japonica Group]
gi|113578839|dbj|BAF17202.1| Os05g0355200 [Oryza sativa Japonica Group]
Length = 632
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 120/425 (28%), Positives = 214/425 (50%), Gaps = 13/425 (3%)
Query: 95 AIQP--SHYLVNKLIHRFKDDWKSALGIFRWAGS----CPGYEHSSEIYEMMVDILGKVR 148
A+ P S LV ++ RFK + + FRWA + G+ H++ Y MV ILGK R
Sbjct: 176 ALSPPLSETLVLAVLDRFKHAHRPSHRFFRWAAAAAAASGGFAHTTITYCKMVHILGKAR 235
Query: 149 QMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNL 208
Q M AL++EM K + ++ ++ F+ AG+ ++AV F+ + T G + E+ N
Sbjct: 236 QFQSMVALIQEMGKEGALCMDAFKIAIKSFAAAGEIKNAVGVFEMMRTHGFDDGVESFNC 295
Query: 209 LLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGC 268
LL L +EG A VF ++ P+ ++ + WC + EA EM +G
Sbjct: 296 LLVALAQEGLGREANQVFDRMRDRYAPDLRSYTALMLAWCNARNLVEAGRVWNEMLENGL 355
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
P V+ ++T+I+ R + ++ + M+A+G PNV TYT ++ K G + A+R
Sbjct: 356 KPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPAPNVWTYTMLIRDHCKRGKMDMAMR 415
Query: 329 ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF 388
E+M+ VG +PD + CL+ G A R+ + + EM + G PD T+N +I +
Sbjct: 416 CFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLE-EMTQKGCPPDGRTYNALIKLL 474
Query: 389 SHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
++ + A + ++M K + +P + T++ ++KS F G+ + ++M ++ +
Sbjct: 475 TNRNMPDDAARIYKKMIK-KGLEPTIHTYNMMMKSYFLGGRNYMMGCAVWEEM-HRKGIC 532
Query: 449 LDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI-TPRYQTCRLILDEVKQKH---MYDA 504
D+ +YT+ I+G R + E A +EMI + TP+ + D K +Y+
Sbjct: 533 PDVNSYTVFINGHIRHGRPEEACKYIEEMIQKGMKTPQIDYNKFAADFSKAGKPDILYEL 592
Query: 505 AEKIE 509
A+K++
Sbjct: 593 AQKVK 597
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 119/279 (42%), Gaps = 12/279 (4%)
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
T+ +H K + IQEM G C+ ++ I+S+ + + M
Sbjct: 223 TYCKMVHILGKARQFQSMVALIQEMGKEGAL-CMDAFKIAIKSFAAAGEIKNAVGVFEMM 281
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRV 358
+ G V ++ ++ LA+ G EA ++ ++M+ + PD R + L+ A +
Sbjct: 282 RTHGFDDGVESFNCLLVALAQEGLGREANQVFDRMRDRYA-PDLRSYTALMLAWCNARNL 340
Query: 359 QEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFH 418
EA V+ EM ENG+ PD NTMI +A + E M K + PNV T+
Sbjct: 341 VEAGRVWN-EMLENGLKPDVVVHNTMIEGLLRGQRRPEAVKMFELM-KAKGPAPNVWTYT 398
Query: 419 PLLKSCFKTGKTD---ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFK 475
L++ K GK D C ++ D D+ TYT ++ G A + + L +
Sbjct: 399 MLIRDHCKRGKMDMAMRCFEEMQDVGCQP-----DVATYTCLLVGYGNAKRMDRVTALLE 453
Query: 476 EMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
EM P +T ++ + ++M D A +I M K
Sbjct: 454 EMTQKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMIK 492
Score = 45.1 bits (105), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 84/202 (41%), Gaps = 34/202 (16%)
Query: 145 GKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNT 203
G ++MD++ ALLEEM+ KG T +++ + +DA R + ++ GLE
Sbjct: 440 GNAKRMDRVTALLEEMTQKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTI 499
Query: 204 ETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
T N+++ +S FL ++ ++ G C + W +EM
Sbjct: 500 HTYNMMM------------KSYFLGGRN-----------YMMG-CAV-------W--EEM 526
Query: 264 KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF 323
G P V SY+ I + R + + ++EM +G + Y + +K+G
Sbjct: 527 HRKGICPDVNSYTVFINGHIRHGRPEEACKYIEEMIQKGMKTPQIDYNKFAADFSKAGKP 586
Query: 324 EEAIRITEKMKIVGSKPDSRFF 345
+ + +K+K G S F
Sbjct: 587 DILYELAQKVKFTGKFDASNVF 608
>gi|15239018|ref|NP_196692.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174149|sp|Q9LFM6.1|PP375_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g11310, mitochondrial; Flags: Precursor
gi|8953393|emb|CAB96666.1| putative protein [Arabidopsis thaliana]
gi|110738090|dbj|BAF00978.1| hypothetical protein [Arabidopsis thaliana]
gi|332004275|gb|AED91658.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 120/434 (27%), Positives = 221/434 (50%), Gaps = 18/434 (4%)
Query: 95 AIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMR 154
I+PS LV+ L R +F+WA PG+ S +++ +V+ L K R+ +
Sbjct: 96 GIEPSVELVHALFDRLSSSPMLLHSVFKWAEMKPGFTLSPSLFDSVVNSLCKAREFEIAW 155
Query: 155 ALLEEMSKG----HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTET----M 206
+L+ + + ++V+ +T ++RR++ AG + A+R F+ ++ + T +
Sbjct: 156 SLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFEFARSYEPVCKSATELRLL 215
Query: 207 NLLLDTLCKEGKVELARSVFLE-----LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQ 261
+LLD LCKEG V A S++LE + S P+ FNI ++GW + ++ +A+ +
Sbjct: 216 EVLLDALCKEGHVREA-SMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWE 274
Query: 262 EMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSG 321
EMK P V++Y T+I+ YCR E+L+EM+ N + + ++ L ++G
Sbjct: 275 EMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAG 334
Query: 322 DFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTF 381
EA+ + E+ + S P +N L+ +A + A + ++ M GV P T+T+
Sbjct: 335 RLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMM-TRGVDPTTTTY 393
Query: 382 NTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDM 441
N FS H E+ ++ ++ + H P+ T+H +LK + GK + Q+ +M
Sbjct: 394 NHFFKYFSKHNKTEEGMNLYFKLIEAGHS-PDRLTYHLILKMLCEDGKLSLAM-QVNKEM 451
Query: 442 VNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHM 501
N+ + D+ T T++IH LCR E A+ F + I P+Y T ++I + ++ K M
Sbjct: 452 KNR-GIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGM 510
Query: 502 YDAAEKIEAVMKKL 515
D A+++ ++M L
Sbjct: 511 SDMAKRLSSLMSSL 524
>gi|297807171|ref|XP_002871469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317306|gb|EFH47728.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 602
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 132/517 (25%), Positives = 246/517 (47%), Gaps = 45/517 (8%)
Query: 14 IPLNPLTSRIRFHSSSENCSHIVSSSPIESYCSDGARLDHHQVLCVDSPRLPDIDVIISK 73
IP+ PL R++ ++ ++ H ++ VL L I ++
Sbjct: 38 IPVEPLIQRLQSPAAHDSTPHQIT------------------VLDFSKTDLSTISNLLEN 79
Query: 74 VHV--GSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYE 131
+V GSS + I+PS LV L R +F+WA PG+
Sbjct: 80 TNVVPGSSLESALDE-------TGIEPSLQLVQALFDRLSSSPMLLHSVFKWAEMKPGFT 132
Query: 132 HSSEIYEMMVDILGKVRQMDQMRALLEEMSKG----HIVTLNTIAKVMRRFSGAGQWEDA 187
S +++ +++ L K R+ + +L+ + + ++V+ +T ++RR++ AG + A
Sbjct: 133 LSPSLFDSVINSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQA 192
Query: 188 VRTFDELGTF----GLEKNTETMNLLLDTLCKEGKVELARSVFLE-----LKSCIPPNAH 238
+R F+ ++ + + +LLD LCKEG V A SV+LE + S P+
Sbjct: 193 IRAFEFARSYEPVCKSASELKLLEVLLDALCKEGYVREA-SVYLERRRGMMDSNWVPSVR 251
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
FNI ++GW + ++ +A+ +EMK P V++Y T+I+ YCR E+L+EM
Sbjct: 252 IFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVEIAMEILEEM 311
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRV 358
+ + + ++ L ++G EA+ + E+ + S P +N L+ +A +
Sbjct: 312 KMAEMELTFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDL 371
Query: 359 QEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFH 418
A + ++ M GV P TST+N FS H E+ ++ ++ + H P+ T+H
Sbjct: 372 PGASKILKMMM-TRGVEPTTSTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHS-PDRLTYH 429
Query: 419 PLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
+LK + GK + Q+ +M N+ + D+ T T+++H LCR + E A+ F +
Sbjct: 430 LILKMLCEDGKLSLAI-QVNKEMKNR-GIDPDLLTTTMLMHLLCRLDMLEEAFEEFDNAV 487
Query: 479 GHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
I P+Y T ++I + ++ K M D A+++ ++M L
Sbjct: 488 RRGIIPQYITFKMIDNGLRSKGMTDMAKRLSSLMSSL 524
>gi|334187687|ref|NP_197005.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635761|sp|Q9LFQ4.2|PP383_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g15010, mitochondrial; Flags: Precursor
gi|332004721|gb|AED92104.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 572
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 127/412 (30%), Positives = 208/412 (50%), Gaps = 15/412 (3%)
Query: 77 GSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEI 136
GS E+ L++ C+ ++PS+ LV +++ R ++DW++A F WAG GY S
Sbjct: 108 GSDRKELRNKLEE---CD-VKPSNELVVEILSRVRNDWETAFTFFVWAGKQQGYVRSVRE 163
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK--GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
Y M+ ILGK+R+ D L++EM K +V T+ ++R++ A+ TF
Sbjct: 164 YHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAY 223
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCK-INRV 253
F LE + LL LC+ V A + K P +A +FNI ++GWC I
Sbjct: 224 KRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSP 283
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
EA+ EM G V+SYS++I Y + + +KV +L D M+ + P+ Y V
Sbjct: 284 REAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAV 343
Query: 314 MSYLAKSGDFEEAIRITEKM-KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN 372
+ LAK+ EA + + M + G +P+ +N LI L +A + +EA V+ EM E
Sbjct: 344 VHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFD-EMLEK 402
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
G+ P T++ + + E+ F +L +M K+ C+P V+T+ L++ + D
Sbjct: 403 GLFPTIRTYHAFMRILR---TGEEVFELLAKMRKM-GCEPTVETYIMLIRKLCRWRDFDN 458
Query: 433 CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
L LL D + + + D+++Y ++IHGL K E AY +KEM + P
Sbjct: 459 VL--LLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRP 508
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 104/219 (47%), Gaps = 12/219 (5%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQW 184
G +H Y M+ K ++++ L + M K I N + + + S +
Sbjct: 297 GVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEA 356
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIF 243
+ ++T +E G+E N T N L+ LCK K E A+ VF E L+ + P T+
Sbjct: 357 RNLMKTMEE--EKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTY--- 411
Query: 244 IHGWCKINRVDEAQWTI-QEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
H + +I R E + + +M+ GC P V +Y +I+ CR +F V L DEM+ +
Sbjct: 412 -HAFMRILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKT 470
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPD 341
P++ +Y ++ L +G EEA ++MK G +P+
Sbjct: 471 VGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPN 509
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 123/308 (39%), Gaps = 41/308 (13%)
Query: 184 WEDAVRTFDELGTF-GLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPP--NAHTF 240
WE A F G G ++ + ++ L K K + A ++ E++ P N+ T
Sbjct: 141 WETAFTFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTL 200
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
I I +C ++ V +A T K + + +++ + CR N S L+
Sbjct: 201 LIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLI-FCNK 259
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
P + ++ V++ ++GS R E
Sbjct: 260 DKYPFDAKSFNIVLNGWCN---------------VIGS-----------------PREAE 287
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
V++ EM GV D ++++MI+ +S G K + + M K E +P+ + ++ +
Sbjct: 288 RVWM---EMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKK-ECIEPDRKVYNAV 343
Query: 421 LKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH 480
+ + K E L+ M + + ++ TY +I LC+A K E A +F EM+
Sbjct: 344 VHALAKASFVSEA-RNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEK 402
Query: 481 DITPRYQT 488
+ P +T
Sbjct: 403 GLFPTIRT 410
>gi|225459754|ref|XP_002284756.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Vitis vinifera]
Length = 531
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 106/387 (27%), Positives = 196/387 (50%), Gaps = 7/387 (1%)
Query: 114 WKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIA 172
+ L F WA + + HS E Y M+D+ GKVRQ D L++ M ++ + + T
Sbjct: 126 FPQTLAFFNWATNLEEFGHSPEPYMEMIDLAGKVRQFDLAWQLIDLMKTRNVEIPVETFT 185
Query: 173 KVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC 232
++RR+ AG +AV F+ + +G + + ++++ +L K+ + A+S F LK
Sbjct: 186 ILVRRYVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKDR 245
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
P+ + +HGWC+ + EA+ EMK G P V +YS +I + CR ++ +
Sbjct: 246 FEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAH 305
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
++ EM GC PN +T+ +M K+G E+ +++ +MK +G PD+ +N LI +
Sbjct: 306 DVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESH 365
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
R ++EAV + + + G + S+FN + S G A + +M L+ C+P
Sbjct: 366 CRDDNLEEAVKI--LNSVKKGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLK-CRP 422
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
N T++ L++ F K+ + + +L +M +++ + + TY ++I C AY
Sbjct: 423 NTVTYNILMR-MFADKKSTDMVLKLRKEM-DENEIEPNANTYRVLISTFCGIGHWNNAYS 480
Query: 473 LFKEMIGHD-ITPRYQTCRLILDEVKQ 498
FKEMI + P ++L ++++
Sbjct: 481 FFKEMIEEKCLRPSLPVYEMVLQQLRK 507
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/343 (20%), Positives = 140/343 (40%), Gaps = 72/343 (20%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGT 196
+ +++ L K R+ + ++ + + + ++ + AG +A R F E+
Sbjct: 219 FSVVISSLSKKRRAIEAQSFFDSLKDRFEPDVVVYTSLVHGWCRAGNISEAERVFGEMKM 278
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDE 255
G++ N T ++++D LC+ G++ A VF E+ PNA TFN + K R ++
Sbjct: 279 AGIQPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEK 338
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLD------------------- 296
+MK GC P I+Y+ +I+S+CR N + ++L+
Sbjct: 339 VLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSVKKGCNLNASSFNPIFGC 398
Query: 297 ---------------EMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPD 341
+M+ C PN VTY +M A + +++ +
Sbjct: 399 ISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKLRK---------- 448
Query: 342 SRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVL 401
EM EN + P+ +T+ +I+ F GH A+
Sbjct: 449 --------------------------EMDENEIEPNANTYRVLISTFCGIGHWNNAYSFF 482
Query: 402 EEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK 444
+EM + + +P++ + +L+ K G+ + +L++ MVN+
Sbjct: 483 KEMIEEKCLRPSLPVYEMVLQQLRKAGQLKKH-EELVEKMVNR 524
>gi|9755668|emb|CAC01820.1| putative protein [Arabidopsis thaliana]
Length = 532
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 127/412 (30%), Positives = 208/412 (50%), Gaps = 15/412 (3%)
Query: 77 GSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEI 136
GS E+ L++ C+ ++PS+ LV +++ R ++DW++A F WAG GY S
Sbjct: 68 GSDRKELRNKLEE---CD-VKPSNELVVEILSRVRNDWETAFTFFVWAGKQQGYVRSVRE 123
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK--GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
Y M+ ILGK+R+ D L++EM K +V T+ ++R++ A+ TF
Sbjct: 124 YHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAY 183
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCK-INRV 253
F LE + LL LC+ V A + K P +A +FNI ++GWC I
Sbjct: 184 KRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSP 243
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
EA+ EM G V+SYS++I Y + + +KV +L D M+ + P+ Y V
Sbjct: 244 REAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAV 303
Query: 314 MSYLAKSGDFEEAIRITEKM-KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN 372
+ LAK+ EA + + M + G +P+ +N LI L +A + +EA V+ EM E
Sbjct: 304 VHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFD-EMLEK 362
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
G+ P T++ + + E+ F +L +M K+ C+P V+T+ L++ + D
Sbjct: 363 GLFPTIRTYHAFMRILR---TGEEVFELLAKMRKM-GCEPTVETYIMLIRKLCRWRDFDN 418
Query: 433 CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
L LL D + + + D+++Y ++IHGL K E AY +KEM + P
Sbjct: 419 VL--LLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRP 468
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 104/219 (47%), Gaps = 12/219 (5%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQW 184
G +H Y M+ K ++++ L + M K I N + + + S +
Sbjct: 257 GVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEA 316
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIF 243
+ ++T +E G+E N T N L+ LCK K E A+ VF E L+ + P T+
Sbjct: 317 RNLMKTMEE--EKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTY--- 371
Query: 244 IHGWCKINRVDEAQWTI-QEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
H + +I R E + + +M+ GC P V +Y +I+ CR +F V L DEM+ +
Sbjct: 372 -HAFMRILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKT 430
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPD 341
P++ +Y ++ L +G EEA ++MK G +P+
Sbjct: 431 VGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPN 469
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 123/308 (39%), Gaps = 41/308 (13%)
Query: 184 WEDAVRTFDELGTF-GLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPP--NAHTF 240
WE A F G G ++ + ++ L K K + A ++ E++ P N+ T
Sbjct: 101 WETAFTFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTL 160
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
I I +C ++ V +A T K + + +++ + CR N S L+
Sbjct: 161 LIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLI-FCNK 219
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
P + ++ V++ ++GS R E
Sbjct: 220 DKYPFDAKSFNIVLNGWCN---------------VIGS-----------------PREAE 247
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
V++ EM GV D ++++MI+ +S G K + + M K E +P+ + ++ +
Sbjct: 248 RVWM---EMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKK-ECIEPDRKVYNAV 303
Query: 421 LKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH 480
+ + K E L+ M + + ++ TY +I LC+A K E A +F EM+
Sbjct: 304 VHALAKASFVSEA-RNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEK 362
Query: 481 DITPRYQT 488
+ P +T
Sbjct: 363 GLFPTIRT 370
>gi|255580475|ref|XP_002531063.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529358|gb|EEF31324.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 207/391 (52%), Gaps = 4/391 (1%)
Query: 95 AIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMR 154
+ + S LV +++ R + AL F+WA G+ +++E Y ++D LGK++Q + +
Sbjct: 108 SFKVSPALVLEVLKRLSNAGALALSFFKWAEKQKGFMYNTESYNALIDSLGKIKQFNMIW 167
Query: 155 ALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLC 214
L+ +M + ++T T A + RR++ +G+ ++A+ TF+++ FGL+ + N LLDTL
Sbjct: 168 NLVNDMKRKGVLTKETFALISRRYARSGKVKEAMNTFEKMEKFGLKIESTDFNRLLDTLI 227
Query: 215 KEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI 273
K +V A++VF ++K P+ ++ I + GW + + + +EMK G P V+
Sbjct: 228 KSRQVLSAQNVFDKMKIRRFVPDIKSYTILLEGWGQEKNLLKLDEVYREMKDEGFEPDVV 287
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
+Y +I +YC+ + EL EM+++ C P+ + T+++ L EA+ +
Sbjct: 288 TYGILINAYCKVRKYDDAIELFREMESKNCQPSPHIFCTLINGLGSVRRLSEALEFFRRS 347
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
K G P++ +N ++ + R+ +A Y EM ++GV P++ T++ ++
Sbjct: 348 KASGFAPETPTYNAVVGAYCWSMRIDDA-YRMVDEMRKSGVGPNSRTYDIILHHLIKAEK 406
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
+AF V E+M+ E C+P V T+ +++ K + + ++ D M K + +
Sbjct: 407 TTEAFSVFEKMSSEEECEPTVSTYDIIVRMFCNMDKVESAI-KVWDRMKAK-GVHPGMHM 464
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
++++I+ LC NK + A F+EM+ I P
Sbjct: 465 FSILINSLCHENKLDIACKYFQEMLDVGIRP 495
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 105/241 (43%), Gaps = 3/241 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G+E Y ++++ KVR+ D L EM SK + + ++ + +A
Sbjct: 281 GFEPDVVTYGILINAYCKVRKYDDAIELFREMESKNCQPSPHIFCTLINGLGSVRRLSEA 340
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHG 246
+ F G T T N ++ C +++ A + E+ KS + PN+ T++I +H
Sbjct: 341 LEFFRRSKASGFAPETPTYNAVVGAYCWSMRIDDAYRMVDEMRKSGVGPNSRTYDIILHH 400
Query: 247 WCKINRVDEAQWTIQEMKGHG-CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
K + EA ++M C P V +Y I++ +C ++ D M+A+G P
Sbjct: 401 LIKAEKTTEAFSVFEKMSSEEECEPTVSTYDIIVRMFCNMDKVESAIKVWDRMKAKGVHP 460
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
+ ++ +++ L + A + ++M VG +P + F+ L L R V +
Sbjct: 461 GMHMFSILINSLCHENKLDIACKYFQEMLDVGIRPPAALFSHLKQALIEDGRKDTVVLLA 520
Query: 366 Q 366
Q
Sbjct: 521 Q 521
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 116/264 (43%), Gaps = 8/264 (3%)
Query: 81 DEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMM 140
DEV++ +K + + L+N K D A+ +FR S + S I+ +
Sbjct: 271 DEVYREMKDEGFEPDVVTYGILINAYCKVRKYD--DAIELFREMES-KNCQPSPHIFCTL 327
Query: 141 VDILGKVRQMDQ-MRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGL 199
++ LG VR++ + + + G T V+ + + + +DA R DE+ G+
Sbjct: 328 INGLGSVRRLSEALEFFRRSKASGFAPETPTYNAVVGAYCWSMRIDDAYRMVDEMRKSGV 387
Query: 200 EKNTETMNLLLDTLCKEGKVELARSVFLELKS---CIPPNAHTFNIFIHGWCKINRVDEA 256
N+ T +++L L K K A SVF ++ S C P T++I + +C +++V+ A
Sbjct: 388 GPNSRTYDIILHHLIKAEKTTEAFSVFEKMSSEEEC-EPTVSTYDIIVRMFCNMDKVESA 446
Query: 257 QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSY 316
MK G HP + +S +I S C + + EM G P ++ +
Sbjct: 447 IKVWDRMKAKGVHPGMHMFSILINSLCHENKLDIACKYFQEMLDVGIRPPAALFSHLKQA 506
Query: 317 LAKSGDFEEAIRITEKMKIVGSKP 340
L + G + + + +K+ + P
Sbjct: 507 LIEDGRKDTVVLLAQKIDKLRKTP 530
>gi|225431703|ref|XP_002264696.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial [Vitis vinifera]
gi|296088528|emb|CBI37519.3| unnamed protein product [Vitis vinifera]
Length = 525
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 123/444 (27%), Positives = 216/444 (48%), Gaps = 17/444 (3%)
Query: 84 FQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDI 143
F +++ N I S +LV++ + R ++ K AL F WA + H Y +++DI
Sbjct: 67 FHAMESSLQLNGIALSTHLVHQTLLRLRNVSKIALSFFLWAKDQAHHSHDVVSYNLIIDI 126
Query: 144 LGKVRQMDQMRALLEEMSKGHIVTLNTIAKVM-RRFSGAGQWEDAVRTFDELGTFGLEKN 202
L KVRQ D + EM + + +T +++ RR AG AVR FD++ F +EK+
Sbjct: 127 LAKVRQFDVAWQFIIEMDQNSLEPTSTTFRILIRRSVSAGLTRQAVRAFDDMSCF-VEKD 185
Query: 203 TETMNL--LLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTI 260
++ + LLDTL K G V+LA +F + K NA + I I+GWCKINRV A+ +
Sbjct: 186 ADSDDFCYLLDTLSKYGYVKLASQIFNQRKFKFEANAKMYTILIYGWCKINRVSIAERLL 245
Query: 261 QEMKGHGCHPCVISYSTIIQSYCRQYNF----------SKVYELLDEMQAQGCPPNVVTY 310
EM G V++Y+ ++ CR+ + ++LDEM+ +G P+V +Y
Sbjct: 246 GEMVERGIEANVVTYNVLLNGICRRASLHPDDRFERTIRDAEKVLDEMRQKGIEPDVTSY 305
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
+ V+ +++ E + MK G P + ++ L R+++A + +M
Sbjct: 306 SIVIHVYSRAHKPELTLDKLRMMKDKGIWPTVATYTSVVKCLCSCGRLEDAEELVS-DMV 364
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKT 430
++GV+P +T+N + + A + +M + C P++ T++ L+ K +
Sbjct: 365 KDGVSPSAATYNCFFKEYRGRKDSDNALRLYRKMKEEYSCLPDMHTYNILVGMFVKLNRM 424
Query: 431 DECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCR 490
E + ++ DDM D+ +YTL+IHGLC K + A F EMI P+ T
Sbjct: 425 -EIVQEIWDDM-KTSGAGPDLDSYTLLIHGLCEKQKWKEACHFFVEMIEKGYLPQKITFE 482
Query: 491 LILDEVKQKHMYDAAEKIEAVMKK 514
+ + Q M +++ +++
Sbjct: 483 TLYRGLIQSDMLKTWRRLKKKLEE 506
>gi|255580124|ref|XP_002530894.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529547|gb|EEF31500.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 519
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 208/417 (49%), Gaps = 11/417 (2%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM- 160
LV +++ R K+ SA F WA PG++HS E Y ++VDILG +Q + L E+
Sbjct: 76 LVEQVLKRCKNLGFSAQRFFLWAKRIPGFDHSKESYHILVDILGSSKQFALLWDFLIEIR 135
Query: 161 -SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV 219
S+ ++ V R +S A DA+R FD + FGL+ + ++ LL LCK
Sbjct: 136 ESQDFEISPQVFWLVFRAYSRANLPSDAIRAFDRMVEFGLKPTIDDLDQLLYVLCKRKHA 195
Query: 220 ELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
+ A+ +F +K A T++I + GW I A EM+ C V++Y++++
Sbjct: 196 KHAQQIFDRVKHQFQTRAKTYSILVRGWGDIGESVSACKVFDEMREQQCAVDVLAYNSLL 255
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
+++C+ S+ Y++ EM + G P+ T++ + ++ D A R+ ++MK
Sbjct: 256 EAFCKGGKVSEAYKMFREMGSNGIKPDACTFSIFIRAYCEANDIHLAYRVLDEMKRYDLV 315
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQV--EMPENGVAPDTSTFNTMITMFSHHGHHEKA 397
P+ +NC+I L + +V+EA YQ+ E+ E PD ++N ++ H A
Sbjct: 316 PNVFTYNCMIKKLCKKEKVEEA---YQLLNEIIERSGQPDAWSYNAILAYHCEHSEVNSA 372
Query: 398 FHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLV 457
++ M K ++C P+ +++ LLK + G+ D + ++ + M K ++TY+++
Sbjct: 373 TRLISRMVK-DNCLPDKHSYNMLLKLLIRVGRFDRAI-EVWESMGEKGFYP-SVSTYSVM 429
Query: 458 IHGLC-RANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
+HGLC + K E A F+ MI I P T ++ + + + D E + M+
Sbjct: 430 VHGLCKKKGKLEEACKYFEMMIDEGIPPYSSTVEILRNRLIGLGLLDYIEILAGKME 486
>gi|356495741|ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 217/425 (51%), Gaps = 11/425 (2%)
Query: 95 AIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMR 154
+ Q S LV +++ R K+ SA F WA S PG++HS + ++V+ILG +Q +
Sbjct: 72 SAQLSTNLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVMSFHILVEILGSCKQFAILW 131
Query: 155 ALLEEMSKGHIVTLNT--IAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDT 212
L EM + H +N+ + R +S A + A+R+F+ + FG++ ++ LL
Sbjct: 132 DFLTEMRESHHYEINSEIFWLIFRAYSQANLPDGAIRSFNRMDEFGVKPTIHDLDKLLFI 191
Query: 213 LCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCV 272
LCK V+ A+ +F + K+ A T++I I GW +I ++A Q M GC +
Sbjct: 192 LCKRKHVKQAQQLFHQAKNRFSLTAKTYSILISGWGEIGDSEKACDLFQAMLEQGCPVDL 251
Query: 273 ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEK 332
++Y+ ++Q+ C+ + + +M ++ P+ TY+ + + D + A R+ +K
Sbjct: 252 LAYNNLLQALCKGGRVDEAKNIFHDMLSKRVEPDAFTYSIFIHSYCDADDVQSAFRVLDK 311
Query: 333 MKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV--EMPENGVAPDTSTFNTMITMFSH 390
M+ P+ +NC+I L + V+EA YQ+ EM GV PDT ++N +
Sbjct: 312 MRRYNLLPNVFTYNCIIKQLCKNEHVEEA---YQLLDEMISRGVKPDTWSYNAIQAYHCD 368
Query: 391 HGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLD 450
H +A ++ M K + C P+ T++ +LK + G+ D+ ++++ ++MV+K
Sbjct: 369 HCEVNRALRLMFRMEK-DICLPDRHTYNMVLKLLIRIGRFDK-VTEVWENMVDKKFYP-S 425
Query: 451 ITTYTLVIHGLC-RANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIE 509
++TY+++IHG C + K E A F+ MI I P T ++ + + D E +
Sbjct: 426 VSTYSVMIHGFCKKKGKLEEACKYFEMMIDEGIPPYVTTVEMLRNRLLGLGFIDHIEILA 485
Query: 510 AVMKK 514
A M++
Sbjct: 486 AKMRQ 490
>gi|225447826|ref|XP_002268129.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Vitis vinifera]
Length = 679
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 114/386 (29%), Positives = 200/386 (51%), Gaps = 5/386 (1%)
Query: 93 CNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQ 152
CN + SH LV ++ RFK K A F WAG G+ H+S Y M+ +LG+ RQ +
Sbjct: 229 CN-VDLSHALVVGVLERFKHARKPAFRFFCWAGQKAGFTHNSRTYNAMMSVLGRTRQFES 287
Query: 153 MRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDT 212
M +L EM + ++T+ T + ++ F+ A + + AV F+ + + + +T+N LLD
Sbjct: 288 MMGMLGEMGEKGLLTMETFSIAIKAFAAAKERKKAVGVFELMKRYNFDAGVDTINCLLDN 347
Query: 213 LCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCV 272
L + + A+++F +L+ PN T+ + ++GWC+I + EA T EM G P +
Sbjct: 348 LGRAKLGKEAQALFEKLEDRFTPNLRTYTVLLNGWCRIKNLVEAGRTWNEMIDKGFKPDI 407
Query: 273 ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEK 332
I++ T+++ + S +L + M+A+G PNV TYT ++ L K +EA+ ++
Sbjct: 408 IAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPSPNVRTYTILIRDLCKQMKMQEAVEYFDE 467
Query: 333 MKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
M G +PD+ + CLI G ++ + VY EM E G D T+N +I + ++
Sbjct: 468 MVDSGCQPDAAVYTCLITGFGNQKKM-DKVYALLKEMKEKGCPADGRTYNALIKLMTNRQ 526
Query: 393 HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
+ A + ++M + + + T++ ++KS F T + E + ++M K D
Sbjct: 527 MPDDAVRIYKKMIQ-NGIQSTLHTYNMMMKSYFYT-RNYEMGCAVWEEMGRK-GCCPDDN 583
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMI 478
+Y + I GL R + E A +EMI
Sbjct: 584 SYIVFIGGLIRHGRSEEACRYLEEMI 609
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 99/231 (42%), Gaps = 2/231 (0%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G++ + M++ L K ++ L E M +KG + T ++R + ++A
Sbjct: 402 GFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPSPNVRTYTILIRDLCKQMKMQEA 461
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHG 246
V FDE+ G + + L+ + K++ ++ E+K P + T+N I
Sbjct: 462 VEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDKVYALLKEMKEKGCPADGRTYNALIKL 521
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
D+A ++M +G + +Y+ +++SY N+ + +EM +GC P+
Sbjct: 522 MTNRQMPDDAVRIYKKMIQNGIQSTLHTYNMMMKSYFYTRNYEMGCAVWEEMGRKGCCPD 581
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
+Y + L + G EEA R E+M G K +N RA +
Sbjct: 582 DNSYIVFIGGLIRHGRSEEACRYLEEMIEKGMKAPQLDYNKFAADFSRAGK 632
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 111/244 (45%), Gaps = 13/244 (5%)
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
+Y+ ++ R F + +L EM +G + T++ + A + + ++A+ + E M
Sbjct: 271 TYNAMMSVLGRTRQFESMMGMLGEMGEKGLL-TMETFSIAIKAFAAAKERKKAVGVFELM 329
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
K NCL+ LGRA +EA ++ E E+ P+ T+ ++ + +
Sbjct: 330 KRYNFDAGVDTINCLLDNLGRAKLGKEAQALF--EKLEDRFTPNLRTYTVLLNGWCRIKN 387
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
+A EM + KP++ H +L+ K K + + L +++ S ++ T
Sbjct: 388 LVEAGRTWNEMID-KGFKPDIIAHHTMLEGLLKCKKKSDAIK--LFEVMKAKGPSPNVRT 444
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ--TCRLILDEVKQKHMYDAAEKIEAV 511
YT++I LC+ K + A F EM+ P TC LI QK M +K+ A+
Sbjct: 445 YTILIRDLCKQMKMQEAVEYFDEMVDSGCQPDAAVYTC-LITGFGNQKKM----DKVYAL 499
Query: 512 MKKL 515
+K++
Sbjct: 500 LKEM 503
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 85/177 (48%), Gaps = 4/177 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDA 187
G + + +Y ++ G ++MD++ ALL+EM KG T +++ + +DA
Sbjct: 472 GCQPDAAVYTCLITGFGNQKKMDKVYALLKEMKEKGCPADGRTYNALIKLMTNRQMPDDA 531
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIH 245
VR + ++ G++ T N+++ + E+ +V+ E+ K C P + +++ +FI
Sbjct: 532 VRIYKKMIQNGIQSTLHTYNMMMKSYFYTRNYEMGCAVWEEMGRKGCCP-DDNSYIVFIG 590
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
G + R +EA ++EM G + Y+ + R + EL +M+ +G
Sbjct: 591 GLIRHGRSEEACRYLEEMIEKGMKAPQLDYNKFAADFSRAGKPDILEELARKMKFEG 647
>gi|225424178|ref|XP_002280443.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial [Vitis vinifera]
Length = 531
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 113/422 (26%), Positives = 214/422 (50%), Gaps = 8/422 (1%)
Query: 95 AIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMR 154
++ S LV +++ + + AL FRWA G+++S+E Y +++ LGK++Q +
Sbjct: 106 SVDVSPTLVLEVLKKLSNSGVIALSFFRWAEKQKGFKYSTENYNALIEALGKIKQFKMIW 165
Query: 155 ALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLC 214
L+ +M ++T T A + RR++ A + ++AV TF+++ FGL+ N LLD LC
Sbjct: 166 NLVNDMRSKGLLTQETFALISRRYARARKVKEAVETFEKMEKFGLQPVLSDFNRLLDALC 225
Query: 215 KEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI 273
K VE A+ VF ++K P+ ++ I + GW + + +EMK G P +
Sbjct: 226 KSRHVERAQEVFDKMKDRKFRPDIKSYTILLEGWGQEQNLLRLDEVYREMKDEGFEPDAV 285
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
+Y +I ++C+ + EL +M+A C P Y T+++ L EA++ E+
Sbjct: 286 TYGILINAHCKARRYDAAVELFHKMEANKCMPTPHIYCTLINGLGSERRLTEALQFFERS 345
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
K G P++ +N ++ + ++ R+ +A + EM + GV P T T++ ++
Sbjct: 346 KASGFTPEAPTYNAVVGSYCQSMRMDDAYRIVD-EMRKCGVGPQTRTYDIILHHLIKARR 404
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
++A+ V + M+ C+P+V T+ +++ + D L ++ D+M K L +
Sbjct: 405 TKEAYRVFQGMSSEPGCEPSVSTYEIVVRMFCNEERVDMAL-RVWDEMKAKGVLP-GMHM 462
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTC----RLILDEVKQKHMYDAAEKIE 509
++ +I+ LC NK + A F EM+ I P + +LDE KQ + A+K++
Sbjct: 463 FSTLINSLCYENKLDEACKYFHEMLDMGIRPPAAMFSNLKQTLLDEGKQDMVLILAQKLD 522
Query: 510 AV 511
+
Sbjct: 523 KI 524
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 105/241 (43%), Gaps = 5/241 (2%)
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
+Y+ +I++ + F ++ L+++M+++G T+ + A++ +EA+ EKM
Sbjct: 147 NYNALIEALGKIKQFKMIWNLVNDMRSKGLLTQE-TFALISRRYARARKVKEAVETFEKM 205
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
+ G +P FN L+ L ++ V+ A V+ +M + PD ++ ++ + +
Sbjct: 206 EKFGLQPVLSDFNRLLDALCKSRHVERAQEVFD-KMKDRKFRPDIKSYTILLEGWGQEQN 264
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
+ V EM K E +P+ T+ L+ + K + D + NK + I
Sbjct: 265 LLRLDEVYREM-KDEGFEPDAVTYGILINAHCKARRYDAAVELFHKMEANKCMPTPHI-- 321
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
Y +I+GL + A F+ TP T ++ Q D A +I M+
Sbjct: 322 YCTLINGLGSERRLTEALQFFERSKASGFTPEAPTYNAVVGSYCQSMRMDDAYRIVDEMR 381
Query: 514 K 514
K
Sbjct: 382 K 382
>gi|11079489|gb|AAG29201.1|AC078898_11 hypothetical protein [Arabidopsis thaliana]
Length = 481
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/421 (27%), Positives = 206/421 (48%), Gaps = 9/421 (2%)
Query: 64 LPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRW 123
+ D+ ISKV + S + + +L Q + ++ S +V +++RF++ F+W
Sbjct: 32 VADVAKNISKVLMSSPQLVLDSALDQ----SGLRVSQEVVEDVLNRFRNAGLLTYRFFQW 87
Query: 124 AGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQ 183
+ YEHS Y MM++ K+RQ M L+ M K ++ + T VMR+++ A +
Sbjct: 88 SEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQK 147
Query: 184 WEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIF 243
++A+ F+ + + L N N LL LCK V A+ VF ++ P++ T++I
Sbjct: 148 VDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSIL 207
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
+ GW K + +A+ +EM GCHP +++YS ++ C+ + ++ M C
Sbjct: 208 LEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSIC 267
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
P Y+ ++ EEA+ +M+ G K D FN LI +A+R++ VY
Sbjct: 268 KPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKN-VY 326
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
EM GV P++ + N ++ G ++AF V +M K+ C+P+ T+ ++K
Sbjct: 327 RVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV--CEPDADTYTMVIK- 383
Query: 424 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
F K E ++ M K + + T++++I+GLC + A +L +EMI I
Sbjct: 384 MFCEKKEMETADKVWKYM-RKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIR 442
Query: 484 P 484
P
Sbjct: 443 P 443
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 154/355 (43%), Gaps = 60/355 (16%)
Query: 163 GHIVTLNTIAKVMRRFSGAG-------QWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK 215
G V+ + V+ RF AG QW + R + E + ++++++ K
Sbjct: 59 GLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHY--------EHSVRAYHMMIESTAK 110
Query: 216 EGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISY 275
+ +L + ++ N TF I + + + +VDEA +
Sbjct: 111 IRQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVDEAIYA---------------- 154
Query: 276 STIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKI 335
+N + Y+L PPN+V + ++S L KS + +A + E M+
Sbjct: 155 ----------FNVMEKYDL---------PPNLVAFNGLLSALCKSKNVRKAQEVFENMRD 195
Query: 336 VGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHE 395
+ PDS+ ++ L+ G+ + +A V++ EM + G PD T++ M+ + G +
Sbjct: 196 RFT-PDSKTYSILLEGWGKEPNLPKAREVFR-EMIDAGCHPDIVTYSIMVDILCKAGRVD 253
Query: 396 KAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYT 455
+A ++ M+ CKP + L+ + + +E + L+ + + + D+ +
Sbjct: 254 EALGIVRSMDP-SICKPTTFIYSVLVHTYGTENRLEEAVDTFLE--MERSGMKADVAVFN 310
Query: 456 LVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEA 510
+I C+AN+ + Y + KEM +TP ++C +IL +H+ + EK EA
Sbjct: 311 SLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIIL-----RHLIERGEKDEA 360
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 126/283 (44%), Gaps = 23/283 (8%)
Query: 62 PRLPDI-DVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGI 120
P LP +V + G D V S+ D +C A + ALGI
Sbjct: 215 PNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDE----------------ALGI 258
Query: 121 FRWAGSCPGY-EHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRF 178
R P + ++ IY ++V G ++++ EM + G + ++ F
Sbjct: 259 VRSMD--PSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAF 316
Query: 179 SGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAH 238
A + ++ R E+ + G+ N+++ N++L L + G+ + A VF ++ P+A
Sbjct: 317 CKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCEPDAD 376
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
T+ + I +C+ ++ A + M+ G P + ++S +I C + K LL+EM
Sbjct: 377 TYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEM 436
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIR-ITEKMKIVGSKP 340
G P+ VT+ + L K + E+ ++ + EKM ++ ++P
Sbjct: 437 IEMGIRPSGVTFGRLRQLLIKE-EREDVLKFLNEKMNVLVNEP 478
>gi|334183972|ref|NP_177860.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806398|sp|Q9FVX2.2|PP129_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g77360, mitochondrial; Flags: Precursor
gi|332197848|gb|AEE35969.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 517
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/421 (27%), Positives = 206/421 (48%), Gaps = 9/421 (2%)
Query: 64 LPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRW 123
+ D+ ISKV + S + + +L Q + ++ S +V +++RF++ F+W
Sbjct: 68 VADVAKNISKVLMSSPQLVLDSALDQ----SGLRVSQEVVEDVLNRFRNAGLLTYRFFQW 123
Query: 124 AGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQ 183
+ YEHS Y MM++ K+RQ M L+ M K ++ + T VMR+++ A +
Sbjct: 124 SEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQK 183
Query: 184 WEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIF 243
++A+ F+ + + L N N LL LCK V A+ VF ++ P++ T++I
Sbjct: 184 VDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSIL 243
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
+ GW K + +A+ +EM GCHP +++YS ++ C+ + ++ M C
Sbjct: 244 LEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSIC 303
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
P Y+ ++ EEA+ +M+ G K D FN LI +A+R++ VY
Sbjct: 304 KPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKN-VY 362
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
EM GV P++ + N ++ G ++AF V +M K+ C+P+ T+ ++K
Sbjct: 363 RVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV--CEPDADTYTMVIK- 419
Query: 424 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
F K E ++ M K + + T++++I+GLC + A +L +EMI I
Sbjct: 420 MFCEKKEMETADKVWKYM-RKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIR 478
Query: 484 P 484
P
Sbjct: 479 P 479
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 154/355 (43%), Gaps = 60/355 (16%)
Query: 163 GHIVTLNTIAKVMRRFSGAG-------QWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK 215
G V+ + V+ RF AG QW + R + E + ++++++ K
Sbjct: 95 GLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHY--------EHSVRAYHMMIESTAK 146
Query: 216 EGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISY 275
+ +L + ++ N TF I + + + +VDEA +
Sbjct: 147 IRQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVDEAIYA---------------- 190
Query: 276 STIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKI 335
+N + Y+L PPN+V + ++S L KS + +A + E M+
Sbjct: 191 ----------FNVMEKYDL---------PPNLVAFNGLLSALCKSKNVRKAQEVFENMRD 231
Query: 336 VGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHE 395
+ PDS+ ++ L+ G+ + +A V++ EM + G PD T++ M+ + G +
Sbjct: 232 RFT-PDSKTYSILLEGWGKEPNLPKAREVFR-EMIDAGCHPDIVTYSIMVDILCKAGRVD 289
Query: 396 KAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYT 455
+A ++ M+ CKP + L+ + + +E + L+ + + + D+ +
Sbjct: 290 EALGIVRSMDP-SICKPTTFIYSVLVHTYGTENRLEEAVDTFLE--MERSGMKADVAVFN 346
Query: 456 LVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEA 510
+I C+AN+ + Y + KEM +TP ++C +IL +H+ + EK EA
Sbjct: 347 SLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIIL-----RHLIERGEKDEA 396
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 126/283 (44%), Gaps = 23/283 (8%)
Query: 62 PRLPDI-DVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGI 120
P LP +V + G D V S+ D +C A + ALGI
Sbjct: 251 PNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDE----------------ALGI 294
Query: 121 FRWAGSCPGY-EHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRF 178
R P + ++ IY ++V G ++++ EM + G + ++ F
Sbjct: 295 VRSMD--PSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAF 352
Query: 179 SGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAH 238
A + ++ R E+ + G+ N+++ N++L L + G+ + A VF ++ P+A
Sbjct: 353 CKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCEPDAD 412
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
T+ + I +C+ ++ A + M+ G P + ++S +I C + K LL+EM
Sbjct: 413 TYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEM 472
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIR-ITEKMKIVGSKP 340
G P+ VT+ + L K + E+ ++ + EKM ++ ++P
Sbjct: 473 IEMGIRPSGVTFGRLRQLLIKE-EREDVLKFLNEKMNVLVNEP 514
>gi|125551971|gb|EAY97680.1| hypothetical protein OsI_19602 [Oryza sativa Indica Group]
Length = 586
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 113/390 (28%), Positives = 199/390 (51%), Gaps = 9/390 (2%)
Query: 95 AIQP--SHYLVNKLIHRFKDDWKSALGIFRWAGS----CPGYEHSSEIYEMMVDILGKVR 148
A+ P S LV ++ RFK + + FRWA + G+ H++ Y MV ILGK R
Sbjct: 176 ALSPPLSETLVLAVLDRFKHAHRPSHRFFRWAAAAAAASGGFAHTTITYCKMVHILGKAR 235
Query: 149 QMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNL 208
Q M AL++EM K + ++ ++ F+ AG+ ++AV F+ + T G + E+ N
Sbjct: 236 QFQSMVALIQEMGKEGALCMDAFKIAIKSFAAAGEIKNAVGVFEMMRTHGFDDGVESFNC 295
Query: 209 LLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGC 268
LL L +EG A VF ++ P+ ++ + WC + EA EM +G
Sbjct: 296 LLVALAQEGLGREANQVFDRMRDRYAPDLRSYTALMLAWCNARNLVEAGRVWNEMLENGL 355
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
P V+ ++T+I+ R + ++ + M+A+G PNV TYT ++ K G + A+R
Sbjct: 356 KPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPAPNVWTYTMLIRDHCKRGKMDMAMR 415
Query: 329 ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF 388
E+M+ VG +PD + CL+ G A R+ + + EM + G PD T+N +I +
Sbjct: 416 CFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLE-EMTQKGCPPDGRTYNALIKLL 474
Query: 389 SHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
++ + A + ++M K + +P + T++ ++KS F G+ + ++M ++ +
Sbjct: 475 TNRNMPDDAARIYKKMIK-KGLEPTIHTYNMMMKSYFLGGRNYMMGCAVWEEM-HRKGIC 532
Query: 449 LDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
D+ +YT+ I+G R + E A +EMI
Sbjct: 533 PDVNSYTVFINGHIRHGRPEEACKYIEEMI 562
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 131/297 (44%), Gaps = 21/297 (7%)
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEA 256
G + ++M L+ + KEG + C+ F I I + + A
Sbjct: 231 LGKARQFQSMVALIQEMGKEGAL------------CM----DAFKIAIKSFAAAGEIKNA 274
Query: 257 QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSY 316
+ M+ HG V S++ ++ + ++ + ++ D M+ + P++ +YT +M
Sbjct: 275 VGVFEMMRTHGFDDGVESFNCLLVALAQEGLGREANQVFDRMRDR-YAPDLRSYTALMLA 333
Query: 317 LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
+ + EA R+ +M G KPD N +I L R R EAV ++++ M G AP
Sbjct: 334 WCNARNLVEAGRVWNEMLENGLKPDVVVHNTMIEGLLRGQRRPEAVKMFEL-MKAKGPAP 392
Query: 377 DTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQ 436
+ T+ +I G + A EEM + C+P+V T+ LL + K + ++
Sbjct: 393 NVWTYTMLIRDHCKRGKMDMAMRCFEEMQDV-GCQPDVATYTCLLVG-YGNAKRMDRVTA 450
Query: 437 LLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
LL++M K D TY +I L N + A ++K+MI + P T +++
Sbjct: 451 LLEEMTQKG-CPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMM 506
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 119/279 (42%), Gaps = 12/279 (4%)
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
T+ +H K + IQEM G C+ ++ I+S+ + + M
Sbjct: 223 TYCKMVHILGKARQFQSMVALIQEMGKEGAL-CMDAFKIAIKSFAAAGEIKNAVGVFEMM 281
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRV 358
+ G V ++ ++ LA+ G EA ++ ++M+ + PD R + L+ A +
Sbjct: 282 RTHGFDDGVESFNCLLVALAQEGLGREANQVFDRMRDRYA-PDLRSYTALMLAWCNARNL 340
Query: 359 QEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFH 418
EA V+ EM ENG+ PD NTMI +A + E M K + PNV T+
Sbjct: 341 VEAGRVWN-EMLENGLKPDVVVHNTMIEGLLRGQRRPEAVKMFELM-KAKGPAPNVWTYT 398
Query: 419 PLLKSCFKTGKTD---ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFK 475
L++ K GK D C ++ D D+ TYT ++ G A + + L +
Sbjct: 399 MLIRDHCKRGKMDMAMRCFEEMQDVGCQP-----DVATYTCLLVGYGNAKRMDRVTALLE 453
Query: 476 EMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
EM P +T ++ + ++M D A +I M K
Sbjct: 454 EMTQKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMIK 492
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 98/208 (47%), Gaps = 5/208 (2%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
++ M++ L + ++ + + E M +KG + T ++R G+ + A+R F+E+
Sbjct: 361 VHNTMIEGLLRGQRRPEAVKMFELMKAKGPAPNVWTYTMLIRDHCKRGKMDMAMRCFEEM 420
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINR 252
G + + T LL +++ ++ E+ K C PP+ T+N I N
Sbjct: 421 QDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMTQKGC-PPDGRTYNALIKLLTNRNM 479
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSY-CRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
D+A ++M G P + +Y+ +++SY N+ + +EM +G P+V +YT
Sbjct: 480 PDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRNYMMGCAVWEEMHRKGICPDVNSYT 539
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSK 339
++ + G EEA + E+M G K
Sbjct: 540 VFINGHIRHGRPEEACKYIEEMIQKGMK 567
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 73/145 (50%), Gaps = 3/145 (2%)
Query: 145 GKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNT 203
G ++MD++ ALLEEM+ KG T +++ + +DA R + ++ GLE
Sbjct: 440 GNAKRMDRVTALLEEMTQKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTI 499
Query: 204 ETMNLLLDTLCKEGK-VELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQ 261
T N+++ + G+ + +V+ E+ + I P+ +++ +FI+G + R +EA I+
Sbjct: 500 HTYNMMMKSYFLGGRNYMMGCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPEEACKYIE 559
Query: 262 EMKGHGCHPCVISYSTIIQSYCRQY 286
EM G I Y+ + + +
Sbjct: 560 EMIQKGMKTPQIDYNKFAADFSKGW 584
>gi|147767583|emb|CAN60200.1| hypothetical protein VITISV_039678 [Vitis vinifera]
Length = 525
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 123/439 (28%), Positives = 211/439 (48%), Gaps = 17/439 (3%)
Query: 84 FQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDI 143
F +++ N I S +LV++ + R ++ K AL F WA + H Y +++DI
Sbjct: 67 FHAMESSLQLNGIALSTHLVHQTLLRLRNVSKIALSFFLWAKDQAHHSHDVVSYNLIIDI 126
Query: 144 LGKVRQMDQMRALLEEMSKGHIVTLNTIAKVM-RRFSGAGQWEDAVRTFDELGTFGLEKN 202
L KVRQ D + EM + + +T +++ RR AG AVR FD++ F +EK+
Sbjct: 127 LAKVRQFDVAWQFIIEMDQNSLEPTSTTFRILIRRSVSAGLTRQAVRAFDDMSCF-VEKD 185
Query: 203 TETMNL--LLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTI 260
++ + LLDTL K G V+LA +F + K NA + I I+GWCKINRV A+ +
Sbjct: 186 ADSDDFCYLLDTLSKYGYVKLASQIFNQRKFKFEANAKMYTILIYGWCKINRVSIAERLL 245
Query: 261 QEMKGHGCHPCVISYSTIIQSYCR----------QYNFSKVYELLDEMQAQGCPPNVVTY 310
EM G V++Y+ ++ CR + ++LDEM+ G P+V +Y
Sbjct: 246 GEMVERGJXANVVTYNVLLNGICRXASLHPDDRFERTIRDAEKVLDEMRQXGIEPDVTSY 305
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
+ V+ +++ E + MK G P + ++ L R+++A + +M
Sbjct: 306 SIVIHVYSRAHKPELTLDKLRMMKDKGIWPTVATYTSVVKCLCSCGRLEDAEELVS-DMV 364
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKT 430
++GV+P +T+N + + A + +M + C P++ T++ L+ K +
Sbjct: 365 KDGVSPSAATYNCFFKEYRGRKDSDNALRLYRKMKEEYSCLPDMHTYNILVGMFVKLNRM 424
Query: 431 DECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCR 490
E + ++ DDM D+ +YTL+IHGLC K + A F EMI P+ T
Sbjct: 425 -EIVQEIWDDM-KTSGAGPDLDSYTLLIHGLCEKQKWKEACHFFVEMIEKGYLPQKITFE 482
Query: 491 LILDEVKQKHMYDAAEKIE 509
+ + Q M +++
Sbjct: 483 TLYRGLIQSDMLKTWRRLK 501
>gi|449465535|ref|XP_004150483.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Cucumis sativus]
Length = 542
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 106/425 (24%), Positives = 223/425 (52%), Gaps = 12/425 (2%)
Query: 96 IQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRA 155
++ S L+ +++ + + AL FRWA G++H++E Y ++++ LGK++Q + +
Sbjct: 118 MELSPALIVEVLKKLSNAGFLALSFFRWAEKQKGFKHTTESYNLLIEALGKIKQFNVIWN 177
Query: 156 LLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK 215
L+ +M + I++ T A + RR++ A + ++AV +F+++ FG + N LLDTLCK
Sbjct: 178 LVSDMKRKGILSRETFALITRRYARARKVKEAVESFEKMEKFGFQMGVSDFNRLLDTLCK 237
Query: 216 EGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVIS 274
V+ A+ VF ++K P+ ++ I + GW + + + +EM+ G P V++
Sbjct: 238 SRNVKKAQEVFDKMKHGRFKPDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVVT 297
Query: 275 YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
+ +I ++C+ + + L EM+A+ P+ + T+++ L +EA+ E++K
Sbjct: 298 FGILINAHCKARKYDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEFFEQLK 357
Query: 335 IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV--EMPENGVAPDTSTFNTMITMFSHHG 392
+ G P++ +N ++ G + Y Y++ EM ++GV P++ T++ ++
Sbjct: 358 LSGFAPEAPTYNAVV---GAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHHLIKGR 414
Query: 393 HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
++A+ V + M++ C+P + T+ +++ + D + Q+ D+M K L +
Sbjct: 415 KSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAI-QIWDEMKAKGVLP-GMH 472
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTC----RLILDEVKQKHMYDAAEKI 508
++ +I+ LC +K E A F+EM+ I P + +LD+ ++ AEKI
Sbjct: 473 LFSTLINSLCHEHKLEDACTYFQEMLDVGIRPPATMFSNLKQALLDDGRKDTALLMAEKI 532
Query: 509 EAVMK 513
+ + K
Sbjct: 533 KKLRK 537
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 92/211 (43%), Gaps = 3/211 (1%)
Query: 133 SSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTF 191
S ++ +++ LG +++ + E++ G T V+ + + + A R
Sbjct: 329 SPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMV 388
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCK 249
DE+ G+ N+ T +++L L K K + A SVF + + P T++I I +C
Sbjct: 389 DEMRKSGVGPNSRTYDIILHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCN 448
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
RVD A EMK G P + +ST+I S C ++ EM G P
Sbjct: 449 EERVDMAIQIWDEMKAKGVLPGMHLFSTLINSLCHEHKLEDACTYFQEMLDVGIRPPATM 508
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
++ + L G + A+ + EK+K + P
Sbjct: 509 FSNLKQALLDDGRKDTALLMAEKIKKLRKAP 539
>gi|297807523|ref|XP_002871645.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317482|gb|EFH47904.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 524
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 125/412 (30%), Positives = 207/412 (50%), Gaps = 15/412 (3%)
Query: 77 GSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEI 136
GS E+ L++ C+ ++PS+ LV +++ + ++DW++A F WAG GY S
Sbjct: 57 GSDRKELRNKLEE---CD-VKPSNELVVEILSQVRNDWETAFTFFVWAGKQQGYVRSVRE 112
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK--GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
Y M+ ILGK+R+ D L++EM K +V T+ ++R++ A+ TF
Sbjct: 113 YHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAY 172
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCK-INRV 253
F LE + LL LC+ V A + K P +A +FNI ++GWC I
Sbjct: 173 KRFKLEMGIDDFQSLLSALCRYKNVSDAEHLIFCNKDTYPFDAKSFNIVLNGWCNVIGSP 232
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
EA+ EM G V+SYS++I Y + + +KV +L D M+ + P+ Y V
Sbjct: 233 REAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKESIEPDRKVYNAV 292
Query: 314 MSYLAKSGDFEEAIRITEKMKI-VGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN 372
+ LAK+ EA + + M+ G +P+ +N LI L +A + +EA V+ EM E
Sbjct: 293 IHALAKASFVSEARNLMKTMEEEKGMEPNVVTYNSLIKPLCKARKTEEAKQVFD-EMLEK 351
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
G+ P T++ + + E+ F +L +M K+ C+P V T+ L++ + D
Sbjct: 352 GLFPTIRTYHAFMRILRTG---EEVFELLAKMRKM-GCQPTVDTYIMLIRKLCRWRDFDN 407
Query: 433 CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
L LL + + + + D+++Y ++IHGL K E AY +KEM + P
Sbjct: 408 VL--LLWNEMKEKGVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKEKGMRP 457
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 106/221 (47%), Gaps = 6/221 (2%)
Query: 178 FSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPP 235
+S G ++ FD + +E + + N ++ L K V AR++ +E + + P
Sbjct: 261 YSKGGSLNKVLKLFDRMKKESIEPDRKVYNAVIHALAKASFVSEARNLMKTMEEEKGMEP 320
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
N T+N I CK + +EA+ EM G P + +Y ++ +V+ELL
Sbjct: 321 NVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRIL---RTGEEVFELL 377
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
+M+ GC P V TY ++ L + DF+ + + +MK G PD + +I+ L
Sbjct: 378 AKMRKMGCQPTVDTYIMLIRKLCRWRDFDNVLLLWNEMKEKGVGPDLSSYIVMIHGLFLN 437
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEK 396
+++EA Y Y EM E G+ P+ + + + + FS + E+
Sbjct: 438 GKIEEA-YGYYKEMKEKGMRPNENVEDMIQSWFSGKQYAEQ 477
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 105/219 (47%), Gaps = 12/219 (5%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQW 184
G +H Y M+ K ++++ L + M K I N + + + S +
Sbjct: 246 GVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKESIEPDRKVYNAVIHALAKASFVSEA 305
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIF 243
+ ++T +E G+E N T N L+ LCK K E A+ VF E L+ + P T+
Sbjct: 306 RNLMKTMEE--EKGMEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTY--- 360
Query: 244 IHGWCKINRVDEAQWTI-QEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
H + +I R E + + +M+ GC P V +Y +I+ CR +F V L +EM+ +G
Sbjct: 361 -HAFMRILRTGEEVFELLAKMRKMGCQPTVDTYIMLIRKLCRWRDFDNVLLLWNEMKEKG 419
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPD 341
P++ +Y ++ L +G EEA ++MK G +P+
Sbjct: 420 VGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKEKGMRPN 458
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 127/308 (41%), Gaps = 41/308 (13%)
Query: 184 WEDAVRTFDELGTF-GLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPP--NAHTF 240
WE A F G G ++ + ++ L K K + A ++ E++ P N+ T
Sbjct: 90 WETAFTFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTL 149
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
I I +C ++ V +A T K + + +++ + CR N S L+
Sbjct: 150 LIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAEHLI----- 204
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
C N TY + AKS + I + ++GS R E
Sbjct: 205 -FC--NKDTY----PFDAKSFN----IVLNGWCNVIGS-----------------PREAE 236
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
V++ EM GV D ++++MI+ +S G K + + M K E +P+ + ++ +
Sbjct: 237 RVWM---EMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKK-ESIEPDRKVYNAV 292
Query: 421 LKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH 480
+ + K E L+ M + + ++ TY +I LC+A K E A +F EM+
Sbjct: 293 IHALAKASFVSEA-RNLMKTMEEEKGMEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEK 351
Query: 481 DITPRYQT 488
+ P +T
Sbjct: 352 GLFPTIRT 359
>gi|147767652|emb|CAN77908.1| hypothetical protein VITISV_033177 [Vitis vinifera]
Length = 1563
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 195/383 (50%), Gaps = 7/383 (1%)
Query: 118 LGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVMR 176
L F WA + + HS E Y M+D+ GKVRQ D L++ M ++ + + T ++R
Sbjct: 1162 LAFFNWATNLEEFGHSPEPYMEMIDLAGKVRQFDLAWQLIDLMKTRNVEIPVETFTILVR 1221
Query: 177 RFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPN 236
R+ AG +AV F+ + +G + + ++++ +L K+ + A+S F LK P+
Sbjct: 1222 RYVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKDRFEPD 1281
Query: 237 AHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLD 296
+ +HGWC+ + EA+ EMK G P V +YS +I + CR ++ +++
Sbjct: 1282 VVVYTSLVHGWCRAGNISEAERVFGEMKMAGIXPNVYTYSIVIDALCRSGQITRAHDVFS 1341
Query: 297 EMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRAS 356
EM GC PN +T+ +M K+G E+ +++ +MK +G PD+ +N LI + R
Sbjct: 1342 EMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDD 1401
Query: 357 RVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQT 416
++EAV + + + G + S+FN + S G A + +M L+ C+PN T
Sbjct: 1402 NLEEAVKI--LNSVKKGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLK-CRPNTVT 1458
Query: 417 FHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKE 476
++ L++ F K+ + + +L +M +++ + + TY ++I C AY FKE
Sbjct: 1459 YNILMR-MFADKKSTDMVLKLRKEM-DENEIEPNANTYRVLISTFCGIGHWNNAYSFFKE 1516
Query: 477 MIGHD-ITPRYQTCRLILDEVKQ 498
MI + P ++L ++++
Sbjct: 1517 MIEEKCLRPSLPVYEMVLQQLRK 1539
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/347 (20%), Positives = 141/347 (40%), Gaps = 72/347 (20%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGT 196
+ +++ L K R+ + ++ + + + ++ + AG +A R F E+
Sbjct: 1251 FSVVISSLSKKRRAIEAQSFFDSLKDRFEPDVVVYTSLVHGWCRAGNISEAERVFGEMKM 1310
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDE 255
G+ N T ++++D LC+ G++ A VF E+ PNA TFN + K R ++
Sbjct: 1311 AGIXPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEK 1370
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLD------------------- 296
+MK GC P I+Y+ +I+S+CR N + ++L+
Sbjct: 1371 VLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSVKKGCNLNASSFNPIFGC 1430
Query: 297 ---------------EMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPD 341
+M+ C PN VTY +M A + +++ +
Sbjct: 1431 ISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKLRK---------- 1480
Query: 342 SRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVL 401
EM EN + P+ +T+ +I+ F GH A+
Sbjct: 1481 --------------------------EMDENEIEPNANTYRVLISTFCGIGHWNNAYSFF 1514
Query: 402 EEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
+EM + + +P++ + +L+ K G+ + +L++ MVN+ ++
Sbjct: 1515 KEMIEEKCLRPSLPVYEMVLQQLRKAGQLKKH-EELVEKMVNRGFVT 1560
>gi|255542990|ref|XP_002512558.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548519|gb|EEF50010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 511
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 113/438 (25%), Positives = 220/438 (50%), Gaps = 15/438 (3%)
Query: 84 FQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDI 143
F +++ + I S L+++ + R + + K AL F ++ S P ++ Y +++DI
Sbjct: 53 FHAMESSLQLHGITLSSSLLHQTLLRLRHNSKIALSFFHYSLSLPSSSVNTTTYNLIIDI 112
Query: 144 LGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKN 202
L KVRQ D L+ +M + ++ +T ++RR AG A+R FD++ +F E
Sbjct: 113 LSKVRQFDVSWQLIIQMDQNNLQPNSHTFLILIRRLISAGFTRQAIRAFDDMESFIAETV 172
Query: 203 TET-MNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQ 261
+T LLDTLCK G +++A VF + K PN + + I+GWCKI R+D A+ I+
Sbjct: 173 NQTHFCFLLDTLCKYGYIKVAVEVFNKRKFRFLPNVRIYTVLIYGWCKIGRIDMAERFIR 232
Query: 262 EMKGHGCHPCVISYSTIIQSYCRQYNFS----------KVYELLDEMQAQGCPPNVVTYT 311
EM G V++Y+ ++ CR+ K ++ DEM+ +G P+V +++
Sbjct: 233 EMDEMGIEANVVTYNVLLDGICRRAKLQPEGRFERTIMKADKVFDEMRQKGIEPDVTSFS 292
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
++ +++ + + + M+ +G P + ++ L R+ +A + + +M
Sbjct: 293 ILLHVYSRAHKPQLTVDKLKLMEEMGICPTVATYTSVLKCLCSCGRIDDAEELLE-QMVR 351
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
NGV+P+ +T+N + E A + ++ + C P+V T++ LL K + +
Sbjct: 352 NGVSPNAATYNCFFKEYRGRKDPETALKLYRKIRQENLCDPSVHTYNILLGMFMKLNRFN 411
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRL 491
++++ +D+ + D+ +YTL++HGLC K + A F EMI + P+ T +
Sbjct: 412 -IVNEIWNDLRSSGS-GPDLDSYTLLVHGLCEKQKWQKACQFFVEMIEKGLLPQKATFEM 469
Query: 492 ILDEVKQKHMYDAAEKIE 509
+ + Q +M +++
Sbjct: 470 LYAGLIQSNMLRTWRRLK 487
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 80/180 (44%), Gaps = 4/180 (2%)
Query: 156 LLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK 215
L+EEM G T+ T V++ G+ +DA +++ G+ N T N
Sbjct: 313 LMEEM--GICPTVATYTSVLKCLCSCGRIDDAEELLEQMVRNGVSPNAATYNCFFKEYRG 370
Query: 216 EGKVELARSVFLELK--SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI 273
E A ++ +++ + P+ HT+NI + + K+NR + +++ G P +
Sbjct: 371 RKDPETALKLYRKIRQENLCDPSVHTYNILLGMFMKLNRFNIVNEIWNDLRSSGSGPDLD 430
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
SY+ ++ C + + K + EM +G P T+ + + L +S R+ +K+
Sbjct: 431 SYTLLVHGLCEKQKWQKACQFFVEMIEKGLLPQKATFEMLYAGLIQSNMLRTWRRLKKKL 490
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 37/193 (19%), Positives = 81/193 (41%), Gaps = 38/193 (19%)
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQ 415
S++ + + Y + +P + V +T+T+N +I + S + ++ ++ +M++ + +PN
Sbjct: 83 SKIALSFFHYSLSLPSSSV--NTTTYNLIIDILSKVRQFDVSWQLIIQMDQ-NNLQPNSH 139
Query: 416 TFHPLLKSCFKTGKTDECLSQLLDDM-------VNKHHLSL------------------- 449
TF L++ G T + + + DDM VN+ H
Sbjct: 140 TFLILIRRLISAGFTRQAI-RAFDDMESFIAETVNQTHFCFLLDTLCKYGYIKVAVEVFN 198
Query: 450 --------DITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHM 501
++ YT++I+G C+ + + A +EM I T ++LD + ++
Sbjct: 199 KRKFRFLPNVRIYTVLIYGWCKIGRIDMAERFIREMDEMGIEANVVTYNVLLDGICRRAK 258
Query: 502 YDAAEKIEAVMKK 514
+ E + K
Sbjct: 259 LQPEGRFERTIMK 271
>gi|240255563|ref|NP_190542.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546755|sp|P0C8A0.1|PP275_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49730
gi|332645062|gb|AEE78583.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 638
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 112/412 (27%), Positives = 206/412 (50%), Gaps = 9/412 (2%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS 161
L+ +++ R D F WA PGY HS E+ + MV IL K+RQ + L+EEM
Sbjct: 99 LIIRVLSRCGDAGNLGYRFFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMR 158
Query: 162 KGH--IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV 219
K + ++ +MRRF+ A + AV DE+ +GLE + LLD LCK G V
Sbjct: 159 KTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSV 218
Query: 220 ELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
+ A VF +++ PPN F ++GWC+ ++ EA+ + +MK G P ++ ++ ++
Sbjct: 219 KEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLL 278
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKS-GDFEEAIRITEKMKIVGS 338
Y + Y+L+++M+ +G PNV YT ++ L ++ +EA+R+ +M+ G
Sbjct: 279 SGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGC 338
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
+ D + LI + + + V +M + GV P T+ ++ E+
Sbjct: 339 EADIVTYTALISGFCKWGMIDKGYSVLD-DMRKKGVMPSQVTYMQIMVAHEKKEQFEECL 397
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
++E+M K C P++ ++ +++ K G+ E + +L ++M + LS + T+ ++I
Sbjct: 398 ELIEKM-KRRGCHPDLLIYNVVIRLACKLGEVKEAV-RLWNEM-EANGLSPGVDTFVIMI 454
Query: 459 HGLCRANKCEWAYLLFKEMIGHDI--TPRYQTCRLILDEVKQKHMYDAAEKI 508
+G A FKEM+ I P+Y T + +L+ + + + A+ +
Sbjct: 455 NGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDV 506
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 128/264 (48%), Gaps = 12/264 (4%)
Query: 256 AQWT-IQEMKGHGCHPCVIS---YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
A W I+EM+ +P +I + +++ + K E+LDEM G P+ +
Sbjct: 149 AVWGLIEEMRK--TNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFG 206
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
++ L K+G +EA ++ E M+ P+ R+F L+Y R ++ EA V V+M E
Sbjct: 207 CLLDALCKNGSVKEASKVFEDMR-EKFPPNLRYFTSLLYGWCREGKLMEAKEVL-VQMKE 264
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK-T 430
G+ PD F +++ ++H G A+ ++ +M K +PNV + L+++ +T K
Sbjct: 265 AGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRK-RGFEPNVNCYTVLIQALCRTEKRM 323
Query: 431 DECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCR 490
DE + ++ + ++ DI TYT +I G C+ + Y + +M + P T
Sbjct: 324 DEAMRVFVE--MERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYM 381
Query: 491 LILDEVKQKHMYDAAEKIEAVMKK 514
I+ ++K ++ ++ MK+
Sbjct: 382 QIMVAHEKKEQFEECLELIEKMKR 405
>gi|449503427|ref|XP_004161997.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g71060, mitochondrial-like [Cucumis sativus]
Length = 542
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 106/425 (24%), Positives = 222/425 (52%), Gaps = 12/425 (2%)
Query: 96 IQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRA 155
++ S L+ +++ + + AL FRWA G++H++E Y ++++ LGK++Q + +
Sbjct: 118 MELSPALIVEVLKKLSNAGFLALSFFRWAEKQKGFKHTTESYNLLIEALGKIKQFNVIWN 177
Query: 156 LLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK 215
L+ +M + I++ T A + RR++ A + ++AV +F+++ FG + N LLDTLCK
Sbjct: 178 LVSDMKRKGILSRETFALITRRYARARKVKEAVESFEKMEKFGFQMGVSDFNRLLDTLCK 237
Query: 216 EGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVIS 274
V+ A+ VF ++K P+ ++ I + GW + + + +EM+ G P V++
Sbjct: 238 SRNVKKAQEVFDKMKHGRFKPDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVVT 297
Query: 275 YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
+ +I ++C+ + + L EM+A+ P+ + T+++ L +EA+ E++K
Sbjct: 298 FGILINAHCKARKYDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEFFEQLK 357
Query: 335 IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV--EMPENGVAPDTSTFNTMITMFSHHG 392
+ G P++ +N ++ G + Y Y++ EM ++GV P++ T++ ++
Sbjct: 358 LSGFAPEAPTYNAVV---GAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHHLIKGR 414
Query: 393 HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
++A+ V + M++ C+P + T+ +++ + D + Q+ D+M K L +
Sbjct: 415 KSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAI-QIWDEMKAKGVLP-GMH 472
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTC----RLILDEVKQKHMYDAAEKI 508
++ +I+ LC +K E A F+EM+ I P + +LD+ ++ AEKI
Sbjct: 473 LFSTLINSLCHEHKLEDACTYFQEMLDVGIRPPATMFSNLKQALLDDGRKDTALLMAEKI 532
Query: 509 EAVMK 513
+ K
Sbjct: 533 XKLRK 537
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 91/211 (43%), Gaps = 3/211 (1%)
Query: 133 SSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTF 191
S ++ +++ LG +++ + E++ G T V+ + + + A R
Sbjct: 329 SPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMV 388
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCK 249
DE+ G+ N+ T +++L L K K + A SVF + + P T++I I +C
Sbjct: 389 DEMRKSGVGPNSRTYDIILHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCN 448
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
RVD A EMK G P + +ST+I S C ++ EM G P
Sbjct: 449 EERVDMAIQIWDEMKAKGVLPGMHLFSTLINSLCHEHKLEDACTYFQEMLDVGIRPPATM 508
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
++ + L G + A+ + EK+ + P
Sbjct: 509 FSNLKQALLDDGRKDTALLMAEKIXKLRKAP 539
>gi|356561955|ref|XP_003549241.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial-like [Glycine max]
Length = 622
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 116/435 (26%), Positives = 224/435 (51%), Gaps = 23/435 (5%)
Query: 95 AIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMR 154
I+P L+ + RF K +F WA + P + ++++ +V+ L K R+ D
Sbjct: 119 GIEPDPALLLAVFDRFGSSPKLLHSLFLWAQTRPAFRPGPKLFDAVVNALAKAREFDAAW 178
Query: 155 ALL---------EEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG---LEKN 202
L+ EE K +V++ T A ++RR++ AG + A+RT+ E T ++
Sbjct: 179 KLVLHHAEKDGEEEGEKERLVSVGTFAIMIRRYARAGMSKLAIRTY-EFATNNKSIVDSG 237
Query: 203 TET--MNLLLDTLCKEGKVELARSVFL---ELKSCIPPNAHTFNIFIHGWCKINRVDEAQ 257
+E + +L+D+LCKEG V A FL EL P+ +NI ++GW ++ ++ + +
Sbjct: 238 SEMSLLEILMDSLCKEGSVREASEYFLWKKELDLSWVPSIRVYNIMLNGWFRLRKLKQGE 297
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
EMK P V++Y T+++ YCR K E++ +M +G PN + Y ++ L
Sbjct: 298 RLWAEMK-ENMRPTVVTYGTLVEGYCRMRRVEKALEMVGDMTKEGIAPNAIVYNPIIDAL 356
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
A++G F+EA+ + E+ ++ P +N L+ +A + A + ++ M G P
Sbjct: 357 AEAGRFKEALGMLERFHVLEIGPTDSTYNSLVKGFCKAGDLVGASKILKM-MISRGFLPS 415
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
+T+N FS E+ ++ ++ + + P+ T+H L+K + K D + Q+
Sbjct: 416 ATTYNYFFRYFSRCRKIEEGMNLYTKLIQSGYT-PDRLTYHLLVKMLCEEEKLDLAV-QV 473
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVK 497
+M + + +D+ T T+++H LC+ + E A++ F++MI I P+Y T + + ++K
Sbjct: 474 SKEMRHNGY-DMDLATSTMLVHLLCKVRRLEEAFVEFEDMIRRGIVPQYLTFQRMKADLK 532
Query: 498 QKHMYDAAEKIEAVM 512
++ M + A+K+ +M
Sbjct: 533 KQGMTEMAQKLCKLM 547
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 124/283 (43%), Gaps = 3/283 (1%)
Query: 133 SSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
S +Y +M++ ++R++ Q L EM + T+ T ++ + + E A+
Sbjct: 276 SIRVYNIMLNGWFRLRKLKQGERLWAEMKENMRPTVVTYGTLVEGYCRMRRVEKALEMVG 335
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKIN 251
++ G+ N N ++D L + G+ + A + I P T+N + G+CK
Sbjct: 336 DMTKEGIAPNAIVYNPIIDALAEAGRFKEALGMLERFHVLEIGPTDSTYNSLVKGFCKAG 395
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
+ A ++ M G P +Y+ + + R + L ++ G P+ +TY
Sbjct: 396 DLVGASKILKMMISRGFLPSATTYNYFFRYFSRCRKIEEGMNLYTKLIQSGYTPDRLTYH 455
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
++ L + + A++++++M+ G D L++ L + R++EA ++ +M
Sbjct: 456 LLVKMLCEEEKLDLAVQVSKEMRHNGYDMDLATSTMLVHLLCKVRRLEEAFVEFE-DMIR 514
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNV 414
G+ P TF M G E A + + M+ + + PN+
Sbjct: 515 RGIVPQYLTFQRMKADLKKQGMTEMAQKLCKLMSSVPYS-PNL 556
>gi|449437410|ref|XP_004136485.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
gi|449519964|ref|XP_004167004.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
Length = 534
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 194/384 (50%), Gaps = 6/384 (1%)
Query: 117 ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVM 175
AL F WA + G+EHS + Y M+D+ GKV+Q L++ M ++ +T+ T + ++
Sbjct: 131 ALAFFNWATAGEGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKARNVEITVVTFSMLV 190
Query: 176 RRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPP 235
RR+ AG +AV F+ + +G + + ++ LCK+ + A+S F LK P
Sbjct: 191 RRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQSFFDNLKHKFEP 250
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
+ + +HGWC+ + EA+ +EMK G P V +YS +I + CR ++ +++
Sbjct: 251 DVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDALCRSGQITRAHDVF 310
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
EM GC PN VT+ ++ ++G E+ +++ +MK + D +N LI T +
Sbjct: 311 AEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLITYNFLIETHCKD 370
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQ 415
+ EA+ V M +N P+ S+FN + + A + M ++ CKPN
Sbjct: 371 DNLGEAIKVLN-SMAKNDCTPNASSFNPIFRCIAKSQDVNGAHRMFARMKEV-GCKPNTV 428
Query: 416 TFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFK 475
T++ L++ F K+ + + +L +M ++ + + TY +I C AY+ F+
Sbjct: 429 TYNILMR-MFAVPKSADMIFKLKKEM-DEEEVEPNFNTYRELIALYCGMGHWNHAYMFFR 486
Query: 476 EMIGHD-ITPRYQTCRLILDEVKQ 498
EMI I P +++L+E+++
Sbjct: 487 EMIDEKCIKPSMPLYKMVLEELRK 510
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 153/316 (48%), Gaps = 3/316 (0%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGT 196
+ ++ IL K R+ + ++ + + + ++ + AG +A F E+
Sbjct: 221 FSNVISILCKKRRAVEAQSFFDNLKHKFEPDVIVYTSLVHGWCRAGDISEAESVFREMKM 280
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDE 255
G+ N T ++++D LC+ G++ A VF E L + PN+ TFN I + R ++
Sbjct: 281 AGISPNVYTYSIVIDALCRSGQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEK 340
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
+MK C +I+Y+ +I+++C+ N + ++L+ M C PN ++ +
Sbjct: 341 VLQVYNQMKRLRCAADLITYNFLIETHCKDDNLGEAIKVLNSMAKNDCTPNASSFNPIFR 400
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
+AKS D A R+ +MK VG KP++ +N L+ + + ++ + EM E V
Sbjct: 401 CIAKSQDVNGAHRMFARMKEVGCKPNTVTYNILMRMFA-VPKSADMIFKLKKEMDEEEVE 459
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS 435
P+ +T+ +I ++ GH A+ EM + KP++ + +L+ K G+ +
Sbjct: 460 PNFNTYRELIALYCGMGHWNHAYMFFREMIDEKCIKPSMPLYKMVLEELRKAGQLKKH-E 518
Query: 436 QLLDDMVNKHHLSLDI 451
+L+D MV + S ++
Sbjct: 519 ELVDKMVERGFASRNL 534
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 127/276 (46%), Gaps = 5/276 (1%)
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+N I K+ + A + I MK V+++S +++ Y R ++ + M+
Sbjct: 151 YNEMIDLAGKVKQFGLAWYLIDLMKARNVEITVVTFSMLVRRYVRAGLAAEAVHAFNRME 210
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
GC +++ ++ V+S L K EA + +K +PD + L++ RA +
Sbjct: 211 DYGCNADIIAFSNVISILCKKRRAVEAQSFFDNLK-HKFEPDVIVYTSLVHGWCRAGDIS 269
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
EA V++ EM G++P+ T++ +I G +A V EM C PN TF+
Sbjct: 270 EAESVFR-EMKMAGISPNVYTYSIVIDALCRSGQITRAHDVFAEMLD-AGCNPNSVTFNN 327
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
L++ + G+T++ L Q+ + M + + D+ TY +I C+ + A + M
Sbjct: 328 LIRVHLRAGRTEKVL-QVYNQM-KRLRCAADLITYNFLIETHCKDDNLGEAIKVLNSMAK 385
Query: 480 HDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
+D TP + I + + + A ++ A MK++
Sbjct: 386 NDCTPNASSFNPIFRCIAKSQDVNGAHRMFARMKEV 421
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 87/221 (39%), Gaps = 16/221 (7%)
Query: 283 CRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIV------ 336
C + S + L ++ A P+ V+ V + KSG I +
Sbjct: 86 CPNFTISSLSNDLSQISA----PHSVSPAVVRYVIEKSGAVRHGIPFLPALAFFNWATAG 141
Query: 337 -GSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHE 395
G + + +N +I G+ + A Y+ + M V TF+ ++ + G
Sbjct: 142 EGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDL-MKARNVEITVVTFSMLVRRYVRAGLAA 200
Query: 396 KAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYT 455
+A H M C ++ F ++ K + E S D++ KH D+ YT
Sbjct: 201 EAVHAFNRMEDY-GCNADIIAFSNVISILCKKRRAVEAQS-FFDNL--KHKFEPDVIVYT 256
Query: 456 LVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV 496
++HG CRA A +F+EM I+P T +++D +
Sbjct: 257 SLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDAL 297
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 180/370 (48%), Gaps = 23/370 (6%)
Query: 149 QMDQMRALLEEMSKGH---------IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGL 199
++D AL++ ++ G +V N + K R G+ DA R F T G
Sbjct: 73 EIDDALALVDSIASGGGSGKCLPLPVVPCNILIK---RLCSGGRVADAERVF---ATLGA 126
Query: 200 EKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWT 259
T N +++ C+ G++E AR + + PP+ TFN I C RV +A
Sbjct: 127 SATVVTYNTMVNGYCRAGRIEDARRLISGMP--FPPDTFTFNPLIRALCVRGRVPDALAV 184
Query: 260 IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK 319
+M GC P V++YS ++ + C+ + + LLDEM+A+GC P++VTY +++ +
Sbjct: 185 FDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCN 244
Query: 320 SGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTS 379
GD +EA+ I + G KPD+ + ++ +L + R +E ++ EM N APD
Sbjct: 245 EGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELF-AEMASNKCAPDEV 303
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEH-CKPNVQTFHPLLKSCFKTGKTDECLSQLL 438
TFNT++T G ++A V++ M+ EH C P++ T+ +L G+ D+ + L
Sbjct: 304 TFNTIVTSLCQQGLVDRAIKVVDHMS--EHGCIPDIVTYSSILDGLCDVGRVDDAVELL- 360
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQ 498
+ + D YT V+ GLC + E A L EM+ D P T ++ + Q
Sbjct: 361 -SRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQ 419
Query: 499 KHMYDAAEKI 508
K + D A K+
Sbjct: 420 KGLVDRAIKV 429
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 127/475 (26%), Positives = 212/475 (44%), Gaps = 64/475 (13%)
Query: 55 QVLCVDSPRLPD-IDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDD 113
+ LCV R+PD + V +H G S V S+ D C A +V D+
Sbjct: 170 RALCVRG-RVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMV------LLDE 222
Query: 114 WKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIA 172
++ G E Y ++++ + +D+ +L ++ S G T
Sbjct: 223 MRAK-----------GCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYT 271
Query: 173 KVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-- 230
V++ G+ +W++ F E+ + + T N ++ +LC++G V+ A V +
Sbjct: 272 PVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEH 331
Query: 231 SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSK 290
CIP + T++ + G C + RVD+A + +K +GC P I+Y+T+++ C +
Sbjct: 332 GCIP-DIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEH 390
Query: 291 VYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK-------IV------- 336
EL+ EM CPP+ VT+ TV++ L + G + AI++ E+M IV
Sbjct: 391 AEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIID 450
Query: 337 ---------------------GSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
G KPD FN L+ L R ++A + V M +
Sbjct: 451 GLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQL-MVNMMHSDCP 509
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS 435
PD +TFNT+IT G +A L+ M + C PN T++ ++ + K GKT E L
Sbjct: 510 PDATTFNTVITSLCQKGLLLQAIETLKIMAE-NGCIPNQSTYNIVVDALLKAGKTQEAL- 567
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCR 490
+LL M N + D+ TY VI + +A K E A L + M+ + ++P T R
Sbjct: 568 KLLSGMTNG---TPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYR 619
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 177/350 (50%), Gaps = 8/350 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
+ +V L + +D+ +++ MS+ G I + T + ++ G+ +DAV L
Sbjct: 305 FNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLK 364
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVD 254
++G + +T +L LC + E A + E+ S PP+ TFN I C+ VD
Sbjct: 365 SYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVD 424
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
A +++M +GC+P +++Y++II C + ELL +Q+ GC P++VT+ T++
Sbjct: 425 RAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLL 484
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
L +E+A ++ M PD+ FN +I +L + + +A+ ++ M ENG
Sbjct: 485 KGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKI-MAENGC 543
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
P+ ST+N ++ G ++A +L M + P++ T++ ++ + K GK +E L
Sbjct: 544 IPNQSTYNIVVDALLKAGKTQEALKLLSGMT---NGTPDLITYNTVISNITKAGKMEEAL 600
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
LL MV+ + LS D TY + +G+CR + + A + + ++P
Sbjct: 601 -DLLRVMVS-NGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSP 648
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 131/279 (46%), Gaps = 12/279 (4%)
Query: 150 MDQMRALLEEMSKG----HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTET 205
+D+ ++E+MS+ IVT N+I + +DA+ L ++G + + T
Sbjct: 423 VDRAIKVVEQMSENGCNPDIVTYNSI---IDGLCNERCIDDAMELLSNLQSYGCKPDIVT 479
Query: 206 MNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
N LL LC + E A + + + S PP+A TFN I C+ + +A T++ M
Sbjct: 480 FNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMA 539
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
+GC P +Y+ ++ + + + +LL M P+++TY TV+S + K+G E
Sbjct: 540 ENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG--TPDLITYNTVISNITKAGKME 597
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTM 384
EA+ + M G PD+ + L Y + R A+ + + + G++PD + +N +
Sbjct: 598 EALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRML-CRLQDMGLSPDATFYNDI 656
Query: 385 ITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
+ F + + A M C P+ T+ LL++
Sbjct: 657 LLGFCQNWRTDIAIDCFAHMVS-SGCMPDESTYIILLEA 694
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 98/264 (37%), Gaps = 43/264 (16%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQWEDA----- 187
Y ++D L R +D LL + K IVT NT+ ++ +WEDA
Sbjct: 445 YNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTL---LKGLCSVDRWEDAEQLMV 501
Query: 188 ------------------------------VRTFDELGTFGLEKNTETMNLLLDTLCKEG 217
+ T + G N T N+++D L K G
Sbjct: 502 NMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAG 561
Query: 218 KVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
K + A + + + P + T+N I K +++EA ++ M +G P I+Y +
Sbjct: 562 KTQEALKLLSGMTNGTP-DLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRS 620
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+ CR+ + +L +Q G P+ Y ++ ++ + AI M G
Sbjct: 621 LAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSG 680
Query: 338 SKPDSRFFNCLIYTLGRASRVQEA 361
PD + L+ L + EA
Sbjct: 681 CMPDESTYIILLEALAYECLLDEA 704
>gi|356544698|ref|XP_003540784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Glycine max]
Length = 495
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 136/466 (29%), Positives = 227/466 (48%), Gaps = 19/466 (4%)
Query: 51 LDHHQVLCVDSPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRF 110
L + V DS P D I+K+ + S V ++L + IQ + LVNK++ R
Sbjct: 25 LPRNAVTIADSVEHPS-DATIAKLVLESDPRTVSEALTKP----TIQWTPDLVNKVMKRL 79
Query: 111 KDDWKSALGIFRWAGSC-PGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI-VTL 168
+ AL F+ P Y HS ++ VDI ++R + AL+ M + +
Sbjct: 80 WNHGPKALQFFKHLDRHHPSYTHSPSSFDHAVDIAARMRDFNSAWALVGRMRSLRLGPSP 139
Query: 169 NTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE 228
T+A + R++ G+ AVRTF + G+ ++ + N LLD LCK +VE A S+
Sbjct: 140 KTLAILAERYASNGKPHRAVRTFLSMAEHGIRQDLHSFNTLLDILCKSKRVETAHSLLKT 199
Query: 229 LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
L S P+ T+NI +G+C I R A ++EM G P +++Y+T+++ Y R
Sbjct: 200 LTSRFRPDTVTYNILANGYCLIKRTPMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQI 259
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
+ +E EM+ + C +VVTYTTV+ +GD ++A R+ +M G P+ +N L
Sbjct: 260 KEAWEFYLEMKKRKCEIDVVTYTTVIHGFGVAGDVKKAKRVFHEMVKEGVVPNVATYNAL 319
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGV-APDTSTFNTMITMFSHHGHHEKAFHVLEEMNK- 406
I L + V+ AV V++ EM GV P+ T+N +I H G E+A +E M +
Sbjct: 320 IQVLCKKDSVENAVVVFE-EMAREGVCVPNVVTYNVVIRGLCHVGDMERALGFMERMGEH 378
Query: 407 -LEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRAN 465
L C VQT++ +++ G+ ++ L ++ M + L ++ TY ++I +
Sbjct: 379 GLRAC---VQTYNVVIRYFCDAGEVEKAL-EVFGKMGDGSCLP-NLDTYNVLISAMFVRK 433
Query: 466 KCE---WAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
K E A L +M+ PR T +L+ + D A++I
Sbjct: 434 KSEDLVVAGKLLMDMVDRGFLPRKFTFNRVLNGLVITGNQDFAKEI 479
>gi|449431996|ref|XP_004133786.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Cucumis sativus]
gi|449477985|ref|XP_004155184.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Cucumis sativus]
Length = 485
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 126/443 (28%), Positives = 212/443 (47%), Gaps = 18/443 (4%)
Query: 60 DSPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALG 119
D + D+D I+ + + K +H I+ S LV ++ R ++DW++A
Sbjct: 5 DKGVIKDVDAIMDIFRGFRDANRIQVRNKLEHCF--IKVSGELVVAVLSRIRNDWEAAFT 62
Query: 120 IFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKG----HIVTLNTIAKVM 175
F WAG PGY HS Y M+ ILGK+R+ D AL++EM G +VT T+ ++
Sbjct: 63 FFVWAGKQPGYAHSVREYHSMISILGKMRKFDTAWALIDEMRGGTPGSSLVTPQTLLIMI 122
Query: 176 RRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPP 235
RR+ A+ TF FG E LL LC+ V+ A + K P
Sbjct: 123 RRYCAVHDVAKAINTFYAHKRFGFNIGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPF 182
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
N +FNI ++GWC I + + + +EM G +SY++ I Y + N KV L
Sbjct: 183 NTKSFNIILNGWCVIGSLRDTERVWKEMTRRGISHDAVSYASCISCYSKVRNLHKVLRLF 242
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
++M+ P+ Y V+ LAK +EA + + M+ G + +N +I L +A
Sbjct: 243 EDMKRMKIDPDRKVYNAVIHSLAKGRCLKEAADLIKTMEEKGIIANVVTYNSVIKPLCKA 302
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQ 415
R EA V++ E+ + G+ P T++ + E+ F +L++M + C P
Sbjct: 303 RRFDEARAVFE-ELLQRGLCPTIQTYHAFLRFLR---TEEEIFELLKKMRTM-GCNPTTD 357
Query: 416 TFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFK 475
T+ L++ + + D +S++ +M +++ +S D ++Y ++IHGL K E A+ +
Sbjct: 358 TYIMLIRKFCRWRQLDN-VSRIWHEM-SENGISPDRSSYIVLIHGLFLNGKLEDAHKYYL 415
Query: 476 EMIGHDITPRYQTCRLILDEVKQ 498
EM D+ P + +DEV Q
Sbjct: 416 EMKEKDLLPEPK-----IDEVLQ 433
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 111/259 (42%), Gaps = 13/259 (5%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQW 184
G H + Y + KVR + ++ L E+M + I N + + + +
Sbjct: 214 GISHDAVSYASCISCYSKVRNLHKVLRLFEDMKRMKIDPDRKVYNAVIHSLAKGRCLKEA 273
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIF 243
D ++T +E G N T N ++ LCK + + AR+VF EL + + P T+
Sbjct: 274 ADLIKTMEEKGIIA---NVVTYNSVIKPLCKARRFDEARAVFEELLQRGLCPTIQTY--- 327
Query: 244 IHGWCKINRVDEAQWTI-QEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
H + + R +E + + ++M+ GC+P +Y +I+ +CR V + EM G
Sbjct: 328 -HAFLRFLRTEEEIFELLKKMRTMGCNPTTDTYIMLIRKFCRWRQLDNVSRIWHEMSENG 386
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
P+ +Y ++ L +G E+A + +MK P+ + L L S QE
Sbjct: 387 ISPDRSSYIVLIHGLFLNGKLEDAHKYYLEMKEKDLLPEPKIDEVLQTWLAGKSVFQENP 446
Query: 363 YVYQVEMPENGVAPDTSTF 381
E + + P+ + F
Sbjct: 447 SDCSGEGKNSSLFPNKNDF 465
>gi|6723418|emb|CAB66911.1| putative protein [Arabidopsis thaliana]
Length = 1184
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 112/412 (27%), Positives = 206/412 (50%), Gaps = 9/412 (2%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS 161
L+ +++ R D F WA PGY HS E+ + MV IL K+RQ + L+EEM
Sbjct: 99 LIIRVLSRCGDAGNLGYRFFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMR 158
Query: 162 KGH--IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV 219
K + ++ +MRRF+ A + AV DE+ +GLE + LLD LCK G V
Sbjct: 159 KTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSV 218
Query: 220 ELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
+ A VF +++ PPN F ++GWC+ ++ EA+ + +MK G P ++ ++ ++
Sbjct: 219 KEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLL 278
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGD-FEEAIRITEKMKIVGS 338
Y + Y+L+++M+ +G PNV YT ++ L ++ +EA+R+ +M+ G
Sbjct: 279 SGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGC 338
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
+ D + LI + + + V +M + GV P T+ ++ E+
Sbjct: 339 EADIVTYTALISGFCKWGMIDKGYSVLD-DMRKKGVMPSQVTYMQIMVAHEKKEQFEECL 397
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
++E+M K C P++ ++ +++ K G+ E + +L ++M + LS + T+ ++I
Sbjct: 398 ELIEKM-KRRGCHPDLLIYNVVIRLACKLGEVKEAV-RLWNEM-EANGLSPGVDTFVIMI 454
Query: 459 HGLCRANKCEWAYLLFKEMIGHDI--TPRYQTCRLILDEVKQKHMYDAAEKI 508
+G A FKEM+ I P+Y T + +L+ + + + A+ +
Sbjct: 455 NGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDV 506
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 128/264 (48%), Gaps = 12/264 (4%)
Query: 256 AQWT-IQEMKGHGCHPCVIS---YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
A W I+EM+ +P +I + +++ + K E+LDEM G P+ +
Sbjct: 149 AVWGLIEEMRK--TNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFG 206
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
++ L K+G +EA ++ E M+ P+ R+F L+Y R ++ EA V V+M E
Sbjct: 207 CLLDALCKNGSVKEASKVFEDMR-EKFPPNLRYFTSLLYGWCREGKLMEAKEVL-VQMKE 264
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK-T 430
G+ PD F +++ ++H G A+ ++ +M K +PNV + L+++ +T K
Sbjct: 265 AGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRK-RGFEPNVNCYTVLIQALCRTEKRM 323
Query: 431 DECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCR 490
DE + ++ + ++ DI TYT +I G C+ + Y + +M + P T
Sbjct: 324 DEAMRVFVE--MERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYM 381
Query: 491 LILDEVKQKHMYDAAEKIEAVMKK 514
I+ ++K ++ ++ MK+
Sbjct: 382 QIMVAHEKKEQFEECLELIEKMKR 405
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 115/383 (30%), Positives = 190/383 (49%), Gaps = 23/383 (6%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGH---------IVTLNTIA----KVMRRFSGAGQ 183
+ ++++ L K R++D+ + E+M+ G ++T NT+ KV R+ G G
Sbjct: 343 FGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGL 402
Query: 184 WEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNI 242
E +R+ NT T N L+D CK +E AR +F ++ K +PPN T N
Sbjct: 403 VE-RMRSQPRC-----MPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNT 456
Query: 243 FIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
+ G CK R++ A EM+G G ++Y+ +I+++C N K EL DEM G
Sbjct: 457 LVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAG 516
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
C P+ + Y T++S L+++G + A + KMK G PD FN LI R +++ EA
Sbjct: 517 CSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEA- 575
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLK 422
Y EM G+ PD T+NT+I+ FS G A ++++M K E P V T+ L+
Sbjct: 576 YEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVK-EGLVPTVVTYGALIH 634
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
+ G DE + ++ DM + + + Y ++I+ LCR N+ + A L +M +
Sbjct: 635 AYCLNGNLDEAM-KIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGV 693
Query: 483 TPRYQTCRLILDEVKQKHMYDAA 505
P T + +++K+ A
Sbjct: 694 KPNTNTFNAMFKGLQEKNWLSKA 716
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 173/352 (49%), Gaps = 12/352 (3%)
Query: 117 ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKG----HIVTLNTIA 172
LG+ S P ++ Y ++D K ++ R L ++M+K ++VTLNT+
Sbjct: 399 GLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLV 458
Query: 173 KVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKS 231
M + G+ AV F+E+ GL+ N T L+ C +E A +F E L++
Sbjct: 459 DGMCKH---GRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEA 515
Query: 232 CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKV 291
P+A + I G + ++D A + + +MK G P ++S++ +I +CR+ +
Sbjct: 516 GCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEA 575
Query: 292 YELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYT 351
YE+L EM+ G P+ VTY T++S+ +K+GDF A R+ +KM G P + LI+
Sbjct: 576 YEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHA 635
Query: 352 LGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCK 411
+ EA+ +++ + V P+T +N +I + A ++++M K++ K
Sbjct: 636 YCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDM-KVKGVK 694
Query: 412 PNVQTFHPLLKSCFKTG---KTDECLSQLLDDMVNKHHLSLDITTYTLVIHG 460
PN TF+ + K + K E + ++ + N +++++I T L G
Sbjct: 695 PNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWLSAVG 746
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 156/336 (46%), Gaps = 11/336 (3%)
Query: 160 MSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV 219
M G ++ + ++ A +++ E+ ++ N T +L++ LCK +V
Sbjct: 297 MKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRV 356
Query: 220 ELARSVFLELKS------CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG-CHPCV 272
+ A VF ++ + P+ T+N I G CK+ R +E ++ M+ C P
Sbjct: 357 DEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNT 416
Query: 273 ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEK 332
++Y+ +I YC+ EL D+M G PPNVVT T++ + K G A+ +
Sbjct: 417 VTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNE 476
Query: 333 MKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
M+ G K ++ + LI + +++A+ ++ EM E G +PD + T+I+ S G
Sbjct: 477 MQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFD-EMLEAGCSPDAIVYYTLISGLSQAG 535
Query: 393 HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
++A VL +M K P++ +F+ L+ + K DE ++L +M N + D
Sbjct: 536 KLDRASFVLSKM-KEAGFSPDIVSFNVLINGFCRKNKLDEAY-EMLKEMENAG-IKPDGV 592
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
TY +I + A+ L K+M+ + P T
Sbjct: 593 TYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVT 628
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 181/384 (47%), Gaps = 19/384 (4%)
Query: 142 DILGKVRQMDQMRALLEEMSKGHIVTLNTI--AKVMRRFSGAGQWEDAVRTFDELGTFGL 199
D +G+ +++ L+ + ++ H V N+I +++ R +G+ + A L G
Sbjct: 243 DKVGRAVDEEEIVGLVSKFAE-HEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGG 301
Query: 200 EKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQW 258
+ N LL L + + + ++ E+K I PN TF I I+ CK RVDEA
Sbjct: 302 VMEAASCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALE 361
Query: 259 TIQEMKGHGCH-----PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG-CPPNVVTYTT 312
++M G + P VI+Y+T+I C+ + L++ M++Q C PN VTY
Sbjct: 362 VFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNC 421
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN 372
++ K+ E A + ++M G P+ N L+ + + R+ AV + EM
Sbjct: 422 LIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFN-EMQGK 480
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH-CKPNVQTFHPLLKSCFKTGKTD 431
G+ + T+ +I F + + EKA + +EM LE C P+ ++ L+ + GK D
Sbjct: 481 GLKGNAVTYTALIRAFCNVNNIEKAMELFDEM--LEAGCSPDAIVYYTLISGLSQAGKLD 538
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRL 491
S +L M + S DI ++ ++I+G CR NK + AY + KEM I P T
Sbjct: 539 RA-SFVLSKM-KEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNT 596
Query: 492 ILDEVKQKHMYDAAEKIEAVMKKL 515
++ + + A ++ MKK+
Sbjct: 597 LISHFSKTGDFSTAHRL---MKKM 617
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 108/462 (23%), Positives = 189/462 (40%), Gaps = 59/462 (12%)
Query: 107 IHRFKDDWKSALGIFRWA-GSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLE--EMSKG 163
I R AL F W + P + + + R+ + LL+ + SK
Sbjct: 93 ITRLLGSTAKALKFFNWVQANSPCQDSPLLSFTLEAVFEHASREPNSHNKLLDLFKTSKS 152
Query: 164 HIVTL--NTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVEL 221
H + L N ++R F A +++ ++EL + T N+L+D L ++G+V+
Sbjct: 153 HKIPLSVNAATLLIRCFGRAQMVDESFLVYNELCPS--RRLTHIRNILIDVLFRKGRVDD 210
Query: 222 ARSVFLEL---KSCIPPNAHTFNIFIHGWCKINRV------DEAQWTIQEMKGHGCHPCV 272
A + E+ K+ PPN++T +I K ++V +E + + H P
Sbjct: 211 ALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAEHEVFPNS 270
Query: 273 ISYSTIIQSYCRQ-----------------------------------YNFSKVYELLDE 297
I + +I CR F ++ LL E
Sbjct: 271 IWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAE 330
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS-----KPDSRFFNCLIYTL 352
M+ PNVVT+ ++++L K +EA+ + EKM S +PD +N LI L
Sbjct: 331 MKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGL 390
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
+ R +E + + + + P+T T+N +I + E A + ++MNK + P
Sbjct: 391 CKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNK-DGVPP 449
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
NV T + L+ K G+ + + + ++M K L + TYT +I C N E A
Sbjct: 450 NVVTLNTLVDGMCKHGRINGAV-EFFNEMQGK-GLKGNAVTYTALIRAFCNVNNIEKAME 507
Query: 473 LFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
LF EM+ +P ++ + Q D A + + MK+
Sbjct: 508 LFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKE 549
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 94/200 (47%), Gaps = 9/200 (4%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQW 184
G+ + ++++ + ++D+ +L+EM I VT NT+ + FS G +
Sbjct: 551 GFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTL---ISHFSKTGDF 607
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC--IPPNAHTFNI 242
A R ++ GL T L+ C G ++ A +F ++ S +PPN +NI
Sbjct: 608 STAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNI 667
Query: 243 FIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
I+ C+ N+VD A + +MK G P +++ + + + SK +EL+D M
Sbjct: 668 LINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHA 727
Query: 303 CPPNVVTYTTVMSYLAKSGD 322
C P+ +T + +L+ G+
Sbjct: 728 CNPDYITMEILTEWLSAVGE 747
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 103/241 (42%), Gaps = 12/241 (4%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEMSKG----HIVTLNTIAKVMRRFSGAGQWEDAVRTF 191
+Y ++ L + ++D+ +L +M + IV+ N + + F + ++A
Sbjct: 523 VYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVL---INGFCRKNKLDEAYEML 579
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKI 250
E+ G++ + T N L+ K G A + ++ K + P T+ IH +C
Sbjct: 580 KEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLN 639
Query: 251 NRVDEAQWTIQEMKGHG-CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
+DEA ++M P + Y+ +I S CR+ L+D+M+ +G PN T
Sbjct: 640 GNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNT 699
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL---IYTLGRASRVQEAVYVYQ 366
+ + L + +A + ++M PD L + +G ++++ V Y+
Sbjct: 700 FNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWLSAVGETAKLKSFVQGYE 759
Query: 367 V 367
V
Sbjct: 760 V 760
>gi|449494638|ref|XP_004159605.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 664
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 206/421 (48%), Gaps = 20/421 (4%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS 161
L +++ R D F WA PGY HS E+Y+ M+ LGK+RQ + AL+EEM
Sbjct: 132 LPERVLSRCGDAGNLGYRFFVWASKQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMR 191
Query: 162 K--GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV 219
K +++T +MRRF+ + AV DE+ +G E + LLD LCK G V
Sbjct: 192 KENPYMLTPEVFIVLMRRFASVRMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSV 251
Query: 220 ELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
+ A S+F +++ PN F ++GWC+ ++ EA+ + ++K G P ++ Y+ ++
Sbjct: 252 KEAASLFEDMRVRFNPNLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLL 311
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
Y + ++LL EM+ C PN ++T ++ K+ +EA+RI +M+ G +
Sbjct: 312 GGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCE 371
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHH--EKA 397
D + LI + +A + +M + G D S + + M +H E+
Sbjct: 372 ADVVTYTTLISGFCKWGNTDKAYEILD-DMIQKG--HDPSQLSYLCIMMAHEKKEELEEC 428
Query: 398 FHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLV 457
++EEM K+ C P++ ++ +++ K G E + +L +M L+ + TY L+
Sbjct: 429 MELIEEMRKI-GCVPDLNIYNTMIRLVCKLGDLKEAV-RLWGEM-QAGGLNPGLDTYILM 485
Query: 458 IHGL----CRANKCEWAYLLFKEMIGHDI--TPRYQTCRLILDEVKQKHMYDAAEKIEAV 511
+HG C C++ FKEM+ + P+Y T + + + + + + A+ + +
Sbjct: 486 VHGFLSQGCLVEACDY----FKEMVERGLLSAPQYGTLKELTNALLRAEKLEMAKNMWSC 541
Query: 512 M 512
M
Sbjct: 542 M 542
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 144/296 (48%), Gaps = 16/296 (5%)
Query: 226 FLELKSCIPPNAHTFNIF---IHGWCKINRVDEAQWTIQEMKGHGCHPCVIS---YSTII 279
F S P H++ ++ I K+ + I+EM+ +P +++ + ++
Sbjct: 150 FFVWASKQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKE--NPYMLTPEVFIVLM 207
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
+ + K E+LDEM GC P+ + ++ L K+G +EA + E M+ V
Sbjct: 208 RRFASVRMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMR-VRFN 266
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
P+ R F L+Y R ++ EA +V V++ E G PD +N ++ ++ G AF
Sbjct: 267 PNLRHFTSLLYGWCREGKIMEAKHVL-VQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFD 325
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIH 459
+L EM K+ +C PN +F L++S KT K DE + ++ +M D+ TYT +I
Sbjct: 326 LLAEMKKV-NCGPNAASFTILIQSFCKTEKMDEAM-RIFTEM-QGSGCEADVVTYTTLIS 382
Query: 460 GLCRANKCEWAYLLFKEMI--GHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
G C+ + AY + +MI GHD + C ++ E K++ + + E IE + K
Sbjct: 383 GFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHE-KKEELEECMELIEEMRK 437
>gi|449463822|ref|XP_004149630.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 641
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 204/419 (48%), Gaps = 16/419 (3%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS 161
L +++ R D F WA PGY HS E+Y+ M+ LGK+RQ + AL+EEM
Sbjct: 109 LPERVLSRCGDAGNLGYRFFVWASKQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMR 168
Query: 162 K--GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV 219
K +++T +MRRF+ + AV DE+ +G E + LLD LCK G V
Sbjct: 169 KENPYMLTPEVFIVLMRRFASVRMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSV 228
Query: 220 ELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
+ A S+F +++ PN F ++GWC+ ++ EA+ + ++K G P ++ Y+ ++
Sbjct: 229 KEAASLFEDMRVRFNPNLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLL 288
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
Y + ++LL EM+ C PN ++T ++ K+ +EA+RI +M+ G +
Sbjct: 289 GGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCE 348
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
D + LI + +A + +M + G P ++ ++ E+
Sbjct: 349 ADVVTYTTLISGFCKWGNTDKAYEILD-DMIQKGHDPSQLSYLCIMMAHEKKEELEECME 407
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIH 459
++EEM K+ C P++ ++ +++ K G E + +L +M L+ + TY L++H
Sbjct: 408 LIEEMRKI-GCVPDLNIYNTMIRLVCKLGDLKEAV-RLWGEM-QAGGLNPGLDTYILMVH 464
Query: 460 GL----CRANKCEWAYLLFKEMIGHDI--TPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
G C C++ FKEM+ + P+Y T + + + + + + A+ + + M
Sbjct: 465 GFLSQGCLVEACDY----FKEMVERGLLSAPQYGTLKELTNALLRAEKLEMAKNMWSCM 519
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 144/296 (48%), Gaps = 16/296 (5%)
Query: 226 FLELKSCIPPNAHTFNIF---IHGWCKINRVDEAQWTIQEMKGHGCHPCVIS---YSTII 279
F S P H++ ++ I K+ + I+EM+ +P +++ + ++
Sbjct: 127 FFVWASKQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKE--NPYMLTPEVFIVLM 184
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
+ + K E+LDEM GC P+ + ++ L K+G +EA + E M+ V
Sbjct: 185 RRFASVRMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMR-VRFN 243
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
P+ R F L+Y R ++ EA +V V++ E G PD +N ++ ++ G AF
Sbjct: 244 PNLRHFTSLLYGWCREGKIMEAKHVL-VQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFD 302
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIH 459
+L EM K+ +C PN +F L++S KT K DE + ++ +M D+ TYT +I
Sbjct: 303 LLAEMKKV-NCGPNAASFTILIQSFCKTEKMDEAM-RIFTEM-QGSGCEADVVTYTTLIS 359
Query: 460 GLCRANKCEWAYLLFKEMI--GHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
G C+ + AY + +MI GHD + C ++ E K++ + + E IE + K
Sbjct: 360 GFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHE-KKEELEECMELIEEMRK 414
>gi|225436259|ref|XP_002275952.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Vitis vinifera]
Length = 566
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 145/498 (29%), Positives = 236/498 (47%), Gaps = 31/498 (6%)
Query: 11 QARIPLNPLTSRIRFHSSSENCSHIVSSSPIESYCSDGARLDHHQVLCVDSPRLPDIDVI 70
Q R P PL S SS CS+ V+ + + +G + VD + P
Sbjct: 43 QTRTPTQPLPSAPTLFSSLRYCSNNVNGNSDTNNGENGEFVRR----IVDILQEP----- 93
Query: 71 ISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGY 130
GSS V L+ C + S LV +++ R ++ W++A F WA PGY
Sbjct: 94 ------GSSMSLVKHKLES---C-GVAASSELVVEVLSRVRNHWEAAFTFFLWAAKQPGY 143
Query: 131 EHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGH----IVTLNTIAKVMRRFSGAGQWED 186
HS Y M+ ILGK+R+ D AL++EM G +VT +T++ ++RR+
Sbjct: 144 AHSLRAYHSMISILGKMRKFDTAWALIDEMRGGRTGTSLVTPHTLSIMIRRYCAVHDVGK 203
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHG 246
A+ TF F E LL LC+ V+ A + ++ P + +FNI ++G
Sbjct: 204 AINTFYAHKQFKFGVGIEEFQNLLSALCRYKNVQDAEQLLFCNRNVFPFDTKSFNIILNG 263
Query: 247 WCK-INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
WC I + EA+ +EM G V+SYS+II Y + N +KV +L ++M+ P
Sbjct: 264 WCNVIGSMREAERFWREMSNRGIQRDVVSYSSIISCYSKVTNLNKVLKLFNQMKEMEIAP 323
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
+ Y V+ LAK+ +EA+ + + M+ G PDS +N LI L RA ++ EA V+
Sbjct: 324 DRKVYNAVVHALAKASFVKEALNLMKAMEGKGIAPDSVTYNSLIKPLSRARKINEAKEVF 383
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
EM + G++P T++ + E+ F +LE+M K C P+ T+ L++
Sbjct: 384 D-EMLQRGLSPTIRTYHAFFRILK---SGEEVFMLLEKM-KETGCHPDKDTYIMLIRRFC 438
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
+ + D +L +M +++ + D ++Y ++IHGL K E AY + EM P
Sbjct: 439 RWRQLDNVF-KLWSEM-SENGVGPDRSSYIVLIHGLFLNGKLEEAYKYYIEMKEKQFLPE 496
Query: 486 YQTCRLILDEVKQKHMYD 503
+T ++ + K D
Sbjct: 497 PKTEDMLQAWISGKETAD 514
>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 124/480 (25%), Positives = 221/480 (46%), Gaps = 69/480 (14%)
Query: 93 CNAIQP--SHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEI-------------- 136
C A QP H L+N+ + RF+ D +F + GY + ++
Sbjct: 53 CKAGQPQVGHKLLNQALKRFRPD------VFLYTSVIHGYCKAGDLDTGYFRAVTPKASL 106
Query: 137 ----YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIA--KVMRRFSGAGQWEDAVRT 190
Y ++ L +++D+ L EE+ K + N +A V+ AG+ ED ++
Sbjct: 107 DVISYTTVIKGLADSKRIDEACELFEEL-KTAGCSPNVVAYTAVIDGLLKAGRIEDGLKN 165
Query: 191 FDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIP-------------- 234
F+E+ T +++D LCK + A VF ++ K C+P
Sbjct: 166 FEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSK 225
Query: 235 --------------------PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVIS 274
P A T+ +HG+CK++ ++EA+ I +M+ GC P +
Sbjct: 226 ASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFI 285
Query: 275 YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
+++++ Y + + Y++L EM A+GC P+V+ YT+++ L +G EA + + M
Sbjct: 286 FTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMI 345
Query: 335 IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHH 394
G PD+ + +I + V+ A + ++ M ++GV PD +N+++ +
Sbjct: 346 EKGCAPDALTYGTIIQNFSKIGNVEAAGEILEL-MAKSGVGPDCFAYNSLMDGYVKLERV 404
Query: 395 EKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTY 454
++AF V + M KPN TF+ L+ FK GKTD S L +M+ K + + +Y
Sbjct: 405 DQAFGVYDRMVA-SGIKPNAVTFNVLMHGLFKDGKTDRAFS-LFKEMLEKEEVPPTLVSY 462
Query: 455 TLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT-CRLILDEVKQKHMYDAAEKIEAVMK 513
T++I GL +A + A+L F+EMI I P T LI K + +A + +E ++K
Sbjct: 463 TILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVK 522
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 152/359 (42%), Gaps = 19/359 (5%)
Query: 97 QPSHYLVNKLIHRF-----KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMD 151
+P+ ++H F ++ K + R G PG + + L K R +
Sbjct: 245 EPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYY---LSKGRAEE 301
Query: 152 QMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLD 211
+ L E ++G + ++ G+ +A FD + G + T ++
Sbjct: 302 AYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQ 361
Query: 212 TLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHP 270
K G VE A + L KS + P+ +N + G+ K+ RVD+A M G P
Sbjct: 362 NFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKP 421
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEM-QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI 329
++++ ++ + + + L EM + + PP +V+YT ++ L K+G EA
Sbjct: 422 NAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQ 481
Query: 330 TEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFS 389
++M G P+ + LIY+L +A R+ EA + + +M + GV PD ++ +IT
Sbjct: 482 FQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVE-DMVKLGVNPDVQAYSALITGLI 540
Query: 390 HHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
+ A+ V +EM K C PN T+ L + G+ LD K H S
Sbjct: 541 DSSMVDTAWDVFQEMMK-RGCAPNEVTYKVLRRGFRAAGRA-------LDLEAVKQHFS 591
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 159/384 (41%), Gaps = 43/384 (11%)
Query: 165 IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARS 224
IV+ NT V+ + + ++A + F+ + G E + L+ CK G+ ++
Sbjct: 7 IVSYNT---VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHK 63
Query: 225 VFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCR 284
+ + P+ + IHG+CK +D + K VISY+T+I+
Sbjct: 64 LLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPK---ASLDVISYTTVIKGLAD 120
Query: 285 QYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRF 344
+ EL +E++ GC PNVV YT V+ L K+G E+ ++ E+M P
Sbjct: 121 SKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTT 180
Query: 345 FNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
+ +I L +A + +A V++ +M + G PDT T+ T+I FS ++A +L+ M
Sbjct: 181 YTVVIDGLCKAQMLPDACKVFE-QMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVM 239
Query: 405 ------------NKLEH----------------------CKPNVQTFHPLLKSCFKTGKT 430
+ H C+P + F LL G+
Sbjct: 240 LTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRA 299
Query: 431 DECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCR 490
+E Q+L +M + + D+ YT +I L + A +F MI P T
Sbjct: 300 EEAY-QVLTEMTAR-GCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYG 357
Query: 491 LILDEVKQKHMYDAAEKIEAVMKK 514
I+ + +AA +I +M K
Sbjct: 358 TIIQNFSKIGNVEAAGEILELMAK 381
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 121/274 (44%), Gaps = 35/274 (12%)
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYEL 294
P ++N I G I+++DEA M +GC P VI+++T+I +C+ ++L
Sbjct: 5 PTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKL 64
Query: 295 LDEMQAQGCPP-------------------------------NVVTYTTVMSYLAKSGDF 323
L++ + P +V++YTTV+ LA S
Sbjct: 65 LNQALKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLADSKRI 124
Query: 324 EEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNT 383
+EA + E++K G P+ + +I L +A R+++ + ++ EM + P +T+
Sbjct: 125 DEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFE-EMSGSSCVPTRTTYTV 183
Query: 384 MITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVN 443
+I A V E+M + + C P+ T+ L+ K K DE +LLD M+
Sbjct: 184 VIDGLCKAQMLPDACKVFEQMVQ-KGCVPDTITYTTLIDGFSKASKMDEA-RKLLDVMLT 241
Query: 444 KHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
K + TY ++HG C+ + A + +M
Sbjct: 242 KGPEPTAV-TYGSIVHGFCKLDMINEAKEVIAQM 274
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 113/246 (45%), Gaps = 8/246 (3%)
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
GC P ++SY+T+I + Y+ + M GC P+V+ +TT++ K+G +
Sbjct: 2 GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
++ + + +PD + +I+ +A + ++ P+ + D ++ T+I
Sbjct: 62 HKLLNQ-ALKRFRPDVFLYTSVIHGYCKAGDLDTG--YFRAVTPKASL--DVISYTTVIK 116
Query: 387 MFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHH 446
+ ++A + EE+ K C PNV + ++ K G+ ++ L ++M
Sbjct: 117 GLADSKRIDEACELFEEL-KTAGCSPNVVAYTAVIDGLLKAGRIEDGLKN-FEEMSGSSC 174
Query: 447 LSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAE 506
+ TTYT+VI GLC+A A +F++M+ P T ++D + D A
Sbjct: 175 VPTR-TTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEAR 233
Query: 507 KIEAVM 512
K+ VM
Sbjct: 234 KLLDVM 239
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/383 (30%), Positives = 205/383 (53%), Gaps = 14/383 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKG---HIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y +++ LG+ + + ++ EM +KG ++ T NT+ + + AGQ+++A+R
Sbjct: 47 YSCLINSLGRAGKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGK---AGQFDEALRLLA 103
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK--SCIPPNAHTFNIFIHGWCKI 250
E+ G + T N L+ TL K G++ A ++F E++ C+P + T+N I+G K+
Sbjct: 104 EMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVP-DTFTYNSLIYGLGKV 162
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
R +A ++EM+ HGC P V++YS++I + K ++L EM+ +G P+ +T+
Sbjct: 163 GRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITF 222
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
T +M L K+G ++A+ + ++MK G KP +N LI G+ + EA Y EM
Sbjct: 223 TALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEA-YNLLDEMK 281
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKT 430
NG PD T++ +IT ++A VL++M K E C P+ T++ L+ K G
Sbjct: 282 RNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEK-EGCPPDTITYNTLINGLGKAGLL 340
Query: 431 DECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCR 490
++ +L D M +K + D+ TY+ +I L +A + E A +LF+EM I P T
Sbjct: 341 NDA-GRLFDRMKSK-GCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYC 398
Query: 491 LILDEVKQKHMYDAAEKIEAVMK 513
I+ + + D A+++ + M+
Sbjct: 399 SIITVLGKAGQVDDADRLFSEMR 421
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/344 (30%), Positives = 184/344 (53%), Gaps = 6/344 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ LGKV + + LLEEM + G + T + ++ G+ A + F E+
Sbjct: 152 YNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMK 211
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVD 254
G + ++ T L+D L K G+V+ A + E+K + P T+N I G+ K+ +
Sbjct: 212 RRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLV 271
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA + EMK +GC P V++YS +I + + ++L +M+ +GCPP+ +TY T++
Sbjct: 272 EAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLI 331
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
+ L K+G +A R+ ++MK G PD ++ LI LG+A+RV+ A +++ EM G+
Sbjct: 332 NGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFE-EMESVGI 390
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
PD T+ ++IT+ G + A + EM + + P+V T++ L S + G+ E
Sbjct: 391 QPDLFTYCSIITVLGKAGQVDDADRLFSEM-RGKGLSPDVITYNAFLNSLGRGGRFKEA- 448
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
++ +DM + L D+ TY ++ GL + + + A L KE+I
Sbjct: 449 RKIFEDM-KESGLLPDVATYDALLLGLSKTKEVDDACGLLKELI 491
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 141/260 (54%), Gaps = 4/260 (1%)
Query: 229 LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
+K PN T+N ++ K + +EAQ +E+K P V+SYS +I S R +
Sbjct: 1 MKGFPSPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKW 60
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
E++ EMQA+GC PN+ TY T++ L K+G F+EA+R+ +M+ G PD R +NCL
Sbjct: 61 EAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCL 120
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
I TLG+A R+ EA ++ EM E G PDT T+N++I G +KA +LEEM +
Sbjct: 121 ISTLGKAGRLSEAFTLF-AEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMER-H 178
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
C P+V T+ L+ K G+T + +L +M + D T+T ++ L +A + +
Sbjct: 179 GCPPDVMTYSSLITGLGKDGETVKAF-KLFQEM-KRRGRKPDSITFTALMDALGKAGRVD 236
Query: 469 WAYLLFKEMIGHDITPRYQT 488
A L EM + P T
Sbjct: 237 DALELLDEMKERGVKPGVVT 256
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 115/388 (29%), Positives = 184/388 (47%), Gaps = 47/388 (12%)
Query: 164 HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELAR 223
++VT N++ + + AGQ E+A F+EL + + + L+++L + GK E A
Sbjct: 8 NVVTYNSLLNALAK---AGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAAL 64
Query: 224 SVFLEL--KSCIP----------------------------------PNAHTFNIFIHGW 247
V E+ K C P P+ T+N I
Sbjct: 65 EVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTL 124
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
K R+ EA EM+ GC P +Y+++I + K ELL+EM+ GCPP+V
Sbjct: 125 GKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDV 184
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
+TY+++++ L K G+ +A ++ ++MK G KPDS F L+ LG+A RV +A+ +
Sbjct: 185 MTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLD- 243
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKT 427
EM E GV P T+N +I F G +A+++L+EM K CKP+V T+ L+ K
Sbjct: 244 EMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEM-KRNGCKPDVVTYSCLITGLIKA 302
Query: 428 GKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
+ DE Q+L M K D TY +I+GL +A A LF M P
Sbjct: 303 SQLDEA-CQVLKKM-EKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVV 360
Query: 488 TCRLILDEVKQKHMYDAA----EKIEAV 511
T ++ + + ++A E++E+V
Sbjct: 361 TYSTLITALGKAARVESACVLFEEMESV 388
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 145/310 (46%), Gaps = 44/310 (14%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK----GHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++ L K Q+D+ +L++M K +T NT+ + + AG DA R FD
Sbjct: 292 YSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGK---AGLLNDAGRLFD 348
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKIN 251
+ + G + T + L+ L K +VE A +F E++S I P+ T+ I K
Sbjct: 349 RMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAG 408
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
+VD+A EM+G G P VI+Y+ + S R F + ++ ++M+ G P+V TY
Sbjct: 409 QVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYD 468
Query: 312 TVMSYLAKSGDFEEA----------------IRITEKMKIV------------------- 336
++ L+K+ + ++A ++ E ++I+
Sbjct: 469 ALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSK 528
Query: 337 GSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEK 396
G P + +N LI L +A RV EA + ++ E G PD +++++I+ G +
Sbjct: 529 GLWPGASSYNALIDALAKAGRVSEAFNTLE-DLKEQGGKPDIVSYSSLISALGQTGQIDT 587
Query: 397 AFHVLEEMNK 406
AF +LEEM+K
Sbjct: 588 AFELLEEMSK 597
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 124/260 (47%), Gaps = 3/260 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ LGK +++ L EEM S G L T ++ AGQ +DA R F E+
Sbjct: 362 YSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMR 421
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVD 254
GL + T N L++L + G+ + AR +F ++K S + P+ T++ + G K VD
Sbjct: 422 GKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVD 481
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
+A ++E+ GC + + ++ N + +ELL ++G P +Y ++
Sbjct: 482 DACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALI 541
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
LAK+G EA E +K G KPD ++ LI LG+ ++ A + + EM + G+
Sbjct: 542 DALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLE-EMSKRGL 600
Query: 375 APDTSTFNTMITMFSHHGHH 394
+++ ++ G
Sbjct: 601 KLSPRSYSNLVRKLQDWGAR 620
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/326 (31%), Positives = 174/326 (53%), Gaps = 5/326 (1%)
Query: 121 FRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFS 179
F WAG GY H+ Y +M+ L ++ D + +L M K GH ++++ + ++R F
Sbjct: 169 FTWAGQQDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFG 228
Query: 180 GAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAH 238
A+ F+++ +FG +T N +L+ L K G A VF +L I P+A
Sbjct: 229 STNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQ 288
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
TF IF+H + + R+D A IQEM G P V +++ +I + + N + + + M
Sbjct: 289 TFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGM 348
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRV 358
+ C PNVVTYTT+++ LAK+G EEA + +MK PD+ +N LI LG+A
Sbjct: 349 KNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEA 408
Query: 359 QEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFH 418
A +++ EM + G+ P+ T+N MI++ G +A+ + ++ K + P+V T++
Sbjct: 409 DMACGLFK-EMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDL-KEQGAVPDVFTYN 466
Query: 419 PLLKSCFKTGKTDECLSQLLDDMVNK 444
L+ K G+ D+ L+ ++ +MV K
Sbjct: 467 TLIDVLGKGGQMDKVLA-IIKEMVEK 491
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 183/385 (47%), Gaps = 41/385 (10%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +VD LGK ++D+ +LL EM K G ++ T + +M F Q E+++ FDE+
Sbjct: 566 YTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMV 625
Query: 196 TFGLEKNTETMNLLLDTLCK----------------EG-------------------KVE 220
G + T +L+++ LCK EG K++
Sbjct: 626 RKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKID 685
Query: 221 LARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
A +F EL+ S + P+ +NI ++G K NRVDEA + MK P + +Y++++
Sbjct: 686 FALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLL 745
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
+ + + + +M +G P+VV YT++M L K G A+ I M
Sbjct: 746 DGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCV 805
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
PD ++ LI +LG+ RV+EA Y ++ + + G P+ ++++I F G ++A
Sbjct: 806 PDVVTYSSLIDSLGKEGRVEEAYYFFENSISK-GCTPNVGVYSSLIDSFGKKGMVDRALE 864
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIH 459
+ EEM + C PN+ T++ LL K G+ + +LL++M K D+ TY ++I
Sbjct: 865 LFEEMQR-RQCPPNIVTYNNLLSGLAKAGRLN-VAEKLLEEM-EKVGCVPDLVTYNILID 921
Query: 460 GLCRANKCEWAYLLFKEMIGHDITP 484
G+ + + A FK M I P
Sbjct: 922 GVGKMGMVDEAESYFKRMKEKGIVP 946
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 179/358 (50%), Gaps = 15/358 (4%)
Query: 82 EVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIF---RWAGSCPGYEHSSEIYE 138
+VF +K++ + + L++ L+ K D+ AL IF + + P + +Y
Sbjct: 654 DVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDF--ALQIFNELQESSLVP----DTFVYN 707
Query: 139 MMVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDAVRTFDELGTF 197
+MV+ L K ++D+ L++ M +I+ L T ++ +G+ E+A F ++
Sbjct: 708 IMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEE 767
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVDE 255
G E + L+D L K GK+ A +F + K C+P + T++ I K RV+E
Sbjct: 768 GHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVP-DVVTYSSLIDSLGKEGRVEE 826
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
A + + GC P V YS++I S+ ++ + EL +EMQ + CPPN+VTY ++S
Sbjct: 827 AYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLS 886
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
LAK+G A ++ E+M+ VG PD +N LI +G+ V EA ++ M E G+
Sbjct: 887 GLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFK-RMKEKGIV 945
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
PD TF ++I +A + + M + E P+V T++ L+ + GK E
Sbjct: 946 PDVITFTSLIESLGKVDKLLEACELFDSMEE-EGYNPSVVTYNVLIDILGRAGKVHEA 1002
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 112/420 (26%), Positives = 192/420 (45%), Gaps = 55/420 (13%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQ---WEDAVRTFD 192
Y ++D+LGK QMD++ A+++EM KG ++ R S AG E A RT
Sbjct: 465 YNTLIDVLGKGGQMDKVLAIIKEMVEKGG-------ECIISRDSNAGHEGTIEGADRTV- 516
Query: 193 ELGTFGLEKNTE-TMNLLLDTLCKEGKVELARSVFLELKS--CIPPNAHTFNIFIHGWCK 249
E + G + E T N L+ G V+ A + +K CIP T+ + G K
Sbjct: 517 EYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIP-TVVTYTTLVDGLGK 575
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
R+DEA ++EM+ GC P V++YS+++ S+ ++ + L DEM +GC +V T
Sbjct: 576 AGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVST 635
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSK------------------------------ 339
Y+ V++ L KS D ++A+ + +MK G +
Sbjct: 636 YSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQ 695
Query: 340 -----PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHH 394
PD+ +N ++ L +++RV EA + M + PD T+ +++ G
Sbjct: 696 ESSLVPDTFVYNIMVNGLVKSNRVDEACKLVD-SMKNQNILPDLFTYTSLLDGLGKSGRL 754
Query: 395 EKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTY 454
E+AF++ +M + H +P+V + L+ K GK L ++ + K D+ TY
Sbjct: 755 EEAFNMFTKMTEEGH-EPDVVAYTSLMDVLGKGGKLSHAL--IIFRAMAKKRCVPDVVTY 811
Query: 455 TLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
+ +I L + + E AY F+ I TP ++D +K M D A ++ M++
Sbjct: 812 SSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQR 871
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 135/278 (48%), Gaps = 8/278 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDA 187
G+E Y ++D+LGK ++ + M+K V + T + ++ G+ E+A
Sbjct: 768 GHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEA 827
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIH 245
F+ + G N + L+D+ K+G V+ A +F E+ + C PPN T+N +
Sbjct: 828 YYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQC-PPNIVTYNNLLS 886
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G K R++ A+ ++EM+ GC P +++Y+ +I + + M+ +G P
Sbjct: 887 GLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVP 946
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
+V+T+T+++ L K EA + + M+ G P +N LI LGRA +V EA ++
Sbjct: 947 DVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIF 1006
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEE 403
EM G PD T M + S E+ FH LEE
Sbjct: 1007 H-EMKVKGCMPDGITIGIMKRILS---VREQQFHALEE 1040
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 111/248 (44%), Gaps = 7/248 (2%)
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
W Q+ G V +Y+ +I+ V ++L M +G ++ T+++
Sbjct: 171 WAGQQ---DGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTF 227
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
+ + A+ I +MK G P + +N ++ L + AV V+ ++ + + PD
Sbjct: 228 GSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFG-KLGQFRIQPD 286
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
TF + F+ G + A ++EM K P V TF L+ + K+G DE +
Sbjct: 287 AQTFRIFVHSFNRSGRLDPAAEPIQEMIK-SGIDPGVHTFTVLIDALVKSGNIDEA-CKF 344
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVK 497
+ M N S ++ TYT +++GL +A + E A +F EM ++ +P ++D +
Sbjct: 345 FNGMKN-LRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLG 403
Query: 498 QKHMYDAA 505
+ D A
Sbjct: 404 KAGEADMA 411
>gi|255579531|ref|XP_002530608.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529856|gb|EEF31788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 596
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 130/526 (24%), Positives = 247/526 (46%), Gaps = 51/526 (9%)
Query: 2 ICHLQKYLK-QARIPLNPLTSRIR-------FHSSSENCS-HIVSSSPIESYCSDGARLD 52
+ H+Q Y K Q I NPL++ +R + N S SSS ++ + D ++
Sbjct: 21 LIHVQLYQKGQEPIDRNPLSNNLRNGFGVVCLKTQENNTSDRDNSSSKVDEFAKDVEKV- 79
Query: 53 HHQVLCVDSPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKD 112
+++L R+P +++ + + + + L ++++R D
Sbjct: 80 -YRILRNFHSRVPKLELALQE--------------------SGVTMRAGLTERVLNRCGD 118
Query: 113 DWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGH--IVTLNT 170
F WA PGY HS E Y+ MV I K+RQ + ALLEEM K + ++T
Sbjct: 119 AGNLGYRFFVWASKQPGYRHSYENYKAMVKIFSKMRQFGAVWALLEEMRKDNSVLITSEL 178
Query: 171 IAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK 230
++RRF+ A E A+ DE+ +G E + LLD LCK G V+ A S+F +++
Sbjct: 179 FIVLIRRFASARLVEKAIEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKQAASLFEDMR 238
Query: 231 SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSK 290
P+ F ++GWC+ ++ EA+ + +M+ G P ++ ++ ++ +Y +
Sbjct: 239 VRFSPSLRHFTSLLYGWCREGKLIEAKHVLVQMREAGFEPDIVVFNNLLSAYSMAGKMTD 298
Query: 291 VYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIY 350
++LL EM +GC PN +YT ++ +EA+R+ +M+ G + D + LI
Sbjct: 299 AFDLLKEMVRKGCEPNANSYTIMIQAFCSQEKMDEAMRVFVEMERTGCEADVVTYTALIS 358
Query: 351 TLGRASRVQEAVYVYQV--EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
+ ++ YQ+ M + G P+ T+ ++ E+ ++E M ++
Sbjct: 359 GFCKWGKINRG---YQILDAMKQKGHMPNQLTYLRILLAHEKKEELEECLELIESM-RMV 414
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGL----CRA 464
C P++ ++ +++ K G+ + + Q+ ++M S ++ T+ ++IHG C
Sbjct: 415 GCVPDLSIYNVVIRLACKLGEVKQGV-QIWNEM-EASDFSPELDTFVIMIHGFLGQGCLV 472
Query: 465 NKCEWAYLLFKEMIGHDI--TPRYQTCRLILDEVKQKHMYDAAEKI 508
CE+ FKEMIG + TP+Y + +L+ + + A+ +
Sbjct: 473 EACEY----FKEMIGRGLLTTPQYGILKELLNALLRGEKLGMAKDV 514
>gi|255540805|ref|XP_002511467.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550582|gb|EEF52069.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 482
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 124/463 (26%), Positives = 221/463 (47%), Gaps = 15/463 (3%)
Query: 50 RLDHHQVLCVDSPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHR 109
R+ HH P + +I + S+ Q+L + +IQ + LVN ++ R
Sbjct: 15 RIRHHSTTTTSPPEATTLAALI----LNSTNS---QTLAESLHSPSIQWTPQLVNTILKR 67
Query: 110 FKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI-VTL 168
+ AL F+ P Y H + ++ +DI ++R + L+ M + +
Sbjct: 68 LWNHGPKALHFFKILSHHPSYCHQASSFDHAIDICARLRDFRTLWFLVSRMRSCRLGPSP 127
Query: 169 NTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE 228
T A + R++ G+ AV F + +G ++ + N +LD LCK +VE+A ++F
Sbjct: 128 RTFAIIAERYAAMGKPHRAVTVFMSMHEYGCFQDLSSFNTILDVLCKSKRVEMAYNLFKA 187
Query: 229 LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
LK + ++NI ++GWC I R +A ++EM G P + +Y+ ++ Y R
Sbjct: 188 LKGKFKADCVSYNIIVNGWCLIKRTPKALEMLKEMVERGLTPNLTTYNIMLNGYFRAGQT 247
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
++ + EM+ + C +VVTYT+V+ L G+ + A + +M G P FN L
Sbjct: 248 NEAWGFFLEMKKRKCDIDVVTYTSVIHGLGVVGEIKRARNVFNQMVKDGVLPSVATFNAL 307
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
I L + V+ A+ +++ EM + G P++ T+N +I H G ++A ++E M +
Sbjct: 308 IQILCKKDSVENAILIFE-EMVKRGYVPNSITYNLVIRGLCHVGEMQRAMELMERMED-D 365
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGL-CRANKC 467
C+PNVQT++ L++ G+ ++ L L M N L ++ TY ++I+ + R N
Sbjct: 366 DCEPNVQTYNILIRYFCDAGEIEKGL-DLFQKMGNGDCLP-NLDTYNILINSMFVRKNSD 423
Query: 468 EW--AYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
A L EM+ PR T +LD + D A++I
Sbjct: 424 NLLVAGKLLVEMVDRGFLPRKLTFNRVLDGLLLTGNQDFAKEI 466
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 126/269 (46%), Gaps = 4/269 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++V+ +++ + +L+EM +G L T ++ + AGQ +A F E+
Sbjct: 199 YNIIVNGWCLIKRTPKALEMLKEMVERGLTPNLTTYNIMLNGYFRAGQTNEAWGFFLEMK 258
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
+ + T ++ L G+++ AR+VF ++ K + P+ TFN I CK + V+
Sbjct: 259 KRKCDIDVVTYTSVIHGLGVVGEIKRARNVFNQMVKDGVLPSVATFNALIQILCKKDSVE 318
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
A +EM G P I+Y+ +I+ C + EL++ M+ C PNV TY ++
Sbjct: 319 NAILIFEEMVKRGYVPNSITYNLVIRGLCHVGEMQRAMELMERMEDDDCEPNVQTYNILI 378
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ--VEMPEN 372
Y +G+ E+ + + +KM P+ +N LI ++ + + VEM +
Sbjct: 379 RYFCDAGEIEKGLDLFQKMGNGDCLPNLDTYNILINSMFVRKNSDNLLVAGKLLVEMVDR 438
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVL 401
G P TFN ++ G+ + A +L
Sbjct: 439 GFLPRKLTFNRVLDGLLLTGNQDFAKEIL 467
>gi|356547370|ref|XP_003542086.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Glycine max]
Length = 628
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 115/416 (27%), Positives = 207/416 (49%), Gaps = 22/416 (5%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS 161
L ++++R D A + WA G+ + Y+ M+ +L ++RQ + AL+EEM
Sbjct: 98 LTERVLNRCGDAGNLAYRFYSWASKQSGHRLDHDAYKAMIKVLSRMRQFGAVWALIEEMR 157
Query: 162 K--GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV 219
+ H++T +MRRF+ A AV+ DE+ +G E + LLD L K G V
Sbjct: 158 QENPHLITPQVFVILMRRFASARMVHKAVQVLDEMPNYGCEPDEYVFGCLLDALRKNGSV 217
Query: 220 ELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
+ A S+F EL+ P+ F ++GWCK ++ EA+ + +MK G P ++ Y+ ++
Sbjct: 218 KEAASLFEELRYRWKPSVKHFTSLLYGWCKEGKLMEAKHVLVQMKDAGIEPDIVVYNNLL 277
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
Y + Y+LL EM+ +GC PN +YT ++ L K EEA R+ +M+ G +
Sbjct: 278 GGYAQADKMGDAYDLLKEMRRKGCEPNATSYTVLIQSLCKHERLEEATRVFVEMQRNGCQ 337
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
D ++ LI + +++ Y EM + G P+ + ++ E+
Sbjct: 338 ADLVTYSTLISGFCKWGKIKRG-YELLDEMIQQGHFPNQVIYQHIMVAHEKKEELEECKE 396
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIH 459
++ EM K+ C P++ ++ +++ K G+ E + +L ++M LS I T+ ++I+
Sbjct: 397 LVNEMQKI-GCAPDLSIYNTVIRLACKLGEVKEGV-RLWNEM-ESSGLSPSIDTFVIMIN 453
Query: 460 GL----CRANKCEWAYLLFKEMIGHDI--TPRYQTCRLILDEVKQKHMYDAAEKIE 509
G C CE+ FKEM+G + P+Y T + +++ + + AEK+E
Sbjct: 454 GFLEQGCLVEACEY----FKEMVGRGLFAAPQYGTLKELMNSLLR------AEKLE 499
>gi|356570295|ref|XP_003553325.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Glycine max]
Length = 516
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 123/447 (27%), Positives = 213/447 (47%), Gaps = 17/447 (3%)
Query: 66 DIDVIISKVH-VGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWA 124
D+ I+ +H +GS + Q L+ C ++ S LV +++ R ++DW++A F WA
Sbjct: 31 DVKTILDIMHEMGSGPSQTKQKLEH---C-SVDLSAKLVVEVLLRTRNDWEAAFTFFLWA 86
Query: 125 GSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGH----IVTLNTIAKVMRRFSG 180
G PGY HS Y M+ ILGK+R+ D L+EEM +G +VT T+ ++R++
Sbjct: 87 GKQPGYAHSIREYHSMISILGKMRKFDTAWNLIEEMRRGRTGPSLVTPQTLLIMIRKYCA 146
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTF 240
A+ TF F + E + LL LC+ V+ A + K+ P + +F
Sbjct: 147 VHDVARAINTFYAYKQFNFQVGLEEFHSLLSALCRYKNVQDAEHLLFCNKNLFPLDTKSF 206
Query: 241 NIFIHGWCK-INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
NI ++GWC I A+ EM V+SY +II Y + KV + DEM+
Sbjct: 207 NIILNGWCNLIVSTSHAERIWHEMSKRRIQHDVVSYGSIISCYSKSSKLYKVLRMFDEMK 266
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
+ P+ Y V+ LAK +EA+ + ++ P+ +N LI L +A +V
Sbjct: 267 KRKITPDRKVYNAVIYALAKGRLVKEAVNLIGTLEDNDVTPNVVTYNSLIKPLCKAGKVD 326
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
EA ++ E+ + ++P TF+ + E+ F +L++M +L C P ++T+
Sbjct: 327 EAKQLF-YEILKRHLSPTIQTFHAFFRILR---TKEEVFELLDKMKEL-GCYPTIETYIM 381
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
L++ + + D+ + D + + + D ++Y ++IHGL K E A+ + EM
Sbjct: 382 LMRKFCRWRQLDDVFK--MWDAMREDGIGHDRSSYIVLIHGLFLNGKLEEAHTYYAEMQE 439
Query: 480 HDITPRYQTCRLILDEVKQKHMYDAAE 506
P +T ++ V K + E
Sbjct: 440 KGFLPEPKTEEMLQAWVSGKQATEGQE 466
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 123/449 (27%), Positives = 220/449 (48%), Gaps = 16/449 (3%)
Query: 70 IISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPG 129
++ ++ G+S+++ + + D + P +V K++ R D +AL F WA + G
Sbjct: 66 VLERIVQGASDEQALR-VALDEYRGQLSPE--IVGKVLQRLIDP-GAALVFFEWAETRDG 121
Query: 130 YEHSSEIYEMMVDILGKVRQMDQ----MRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWE 185
Y+H ++++L K Q Q R+ +E G VT +T+ + F AG+
Sbjct: 122 YQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTL---ISGFIRAGKIL 178
Query: 186 DAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIH 245
A FDE+ GL+ + +L LC G+ A F E+ PP++ T+N I+
Sbjct: 179 PAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMIN 238
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G K +R+D+A ++EM +G P V SY+T++ +C+ LL++M +GCPP
Sbjct: 239 GLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPP 298
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
+VV+YTTV++ L K +EA R+ +KM G +P+ + L+ R + AV +
Sbjct: 299 DVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELV 358
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
+ +M E G P+ T+N ++ +F E+A VL+ M + C P+ + ++
Sbjct: 359 R-KMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQ-TGCPPDAINYSTIISGFC 416
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
K GK E LL+ M+ + D+ + +I LC+A + A L + IG D P
Sbjct: 417 KAGKLREA-HDLLEQMI-RRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPD 474
Query: 486 YQTCRLILDEV-KQKHMYDAAEKIEAVMK 513
+++ + K K + +A ++ ++K
Sbjct: 475 VVAYSILIHALCKAKRLPEAESWLDVMVK 503
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 196/392 (50%), Gaps = 12/392 (3%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKG-----HIVTLNTIAKVMRRFSGAGQ 183
G + ++ +++ L R++D L +EM + + T +TI + + +G+
Sbjct: 907 GVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVK---SGK 963
Query: 184 WEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNI 242
+DA R +++ + G N T + LL LCK GK++ A ++ + +S PN T+N
Sbjct: 964 VDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNT 1023
Query: 243 FIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
I G CK+ R+DEA ++EM GC P V++Y+ ++ ++C+ L++ M +G
Sbjct: 1024 IIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKG 1083
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
PN+ TY +++ K + E A ++ M G P+ +N +I L +A++V E V
Sbjct: 1084 YVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGV 1143
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLK 422
+ + +M N PD TFNT+I + A+ + + + C PN+ T++ L+
Sbjct: 1144 LLLE-QMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQE-SGCTPNLVTYNSLVH 1201
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
K+ + D+ LL +M K S DI TY VI GLC++ + + AY LF +M+ +
Sbjct: 1202 GLCKSRRFDQA-EYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGL 1260
Query: 483 TPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
P T +++ + + D A + +M K
Sbjct: 1261 APDDVTYSIVISSLCKWRFMDEANNVLELMLK 1292
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 129/462 (27%), Positives = 212/462 (45%), Gaps = 61/462 (13%)
Query: 65 PDI----DVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRF----KDDWKS 116
PD+ ++ S V G +D L +D V P+ + L+H K D +
Sbjct: 946 PDVFTYSTIVDSLVKSGKVDDAC--RLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEAT 1003
Query: 117 ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKG----HIVTLNTIA 172
AL + R S G + Y ++D K+ ++D+ LLEEM G ++VT +
Sbjct: 1004 AL-LQRMTRS--GCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVL- 1059
Query: 173 KVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--K 230
+ F G+ EDA+ + + G N T N LLD CK+ +VE A + + K
Sbjct: 1060 --LDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQK 1117
Query: 231 SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSK 290
C+P N ++N I G CK +V E +++M + C P +++++TII + C+ Y
Sbjct: 1118 GCVP-NVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDI 1176
Query: 291 VYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM-KIVGSKPDSRFFNCLI 349
YEL + +Q GC PN+VTY +++ L KS F++A + +M + G PD +N +I
Sbjct: 1177 AYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVI 1236
Query: 350 YTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH 409
L ++ RV A ++ ++M +G+APD T++ +I+ ++A +VLE M K
Sbjct: 1237 DGLCKSKRVDRAYKLF-LQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLK-NG 1294
Query: 410 CKPNVQTFHPLLKSCFKTGKTDECL----------------------------------S 435
P T+ L+ KTG D+ L
Sbjct: 1295 FDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAG 1354
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
+LL+ M+ + L D TY ++ G C A+ E A LF+ M
Sbjct: 1355 ELLETML-RAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVM 1395
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 104/426 (24%), Positives = 196/426 (46%), Gaps = 44/426 (10%)
Query: 126 SCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQW 184
+CP S Y M++ L K ++D LLEEM G + + V+ F A +
Sbjct: 225 TCP---PDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRV 281
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNI 242
E+A+ +++ T G + + +++ LCK +V+ A V ++ + C PN T+
Sbjct: 282 ENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGC-QPNVITYGT 340
Query: 243 FIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
+ G+C++ +D A +++M G P I+Y+ I+ +CR+ + + +++L M G
Sbjct: 341 LVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTG 400
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA- 361
CPP+ + Y+T++S K+G EA + E+M G +PD + LI L +A+ + A
Sbjct: 401 CPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQ 460
Query: 362 --------------VYVYQV---------EMPE----------NGVAPDTSTFNTMITMF 388
V Y + +PE N PD T+N+++
Sbjct: 461 ELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGL 520
Query: 389 SHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
AF + + M + P+V T+ ++ S K D L + + +
Sbjct: 521 CKSRRINDAFLLFDRM-RAAGVMPDVVTYSIVIHSFCKDNNLDSAFKML--ERMKEAKCV 577
Query: 449 LDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
D+ TY+ +I+GLC+A + A+ +F+EM+G P T ++D + + + + A ++
Sbjct: 578 PDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEM 637
Query: 509 EAVMKK 514
+M+K
Sbjct: 638 LEIMRK 643
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 111/463 (23%), Positives = 206/463 (44%), Gaps = 48/463 (10%)
Query: 87 LKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRW--AGSCPGYEHSSEIYEMMVD 142
L ++ V N P+ + N ++H F + ++AL + CP S Y +++
Sbjct: 252 LLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVS---YTTVIN 308
Query: 143 ILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEK 201
L K+ Q+D+ ++++M +G + T ++ F G + AV ++ G
Sbjct: 309 GLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRP 368
Query: 202 NTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTI 260
N T N ++ C+ +E A V + +++ PP+A ++ I G+CK ++ EA +
Sbjct: 369 NAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLL 428
Query: 261 QEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL------------------------- 295
++M GC P V ST+I + C+ ELL
Sbjct: 429 EQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKA 488
Query: 296 ----------DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFF 345
D M C P+VVTY +V+ L KS +A + ++M+ G PD +
Sbjct: 489 KRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTY 548
Query: 346 NCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMN 405
+ +I++ + + + A + + M E PD T++ +I G +KAF V +EM
Sbjct: 549 SIVIHSFCKDNNLDSAFKMLE-RMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEML 607
Query: 406 KLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRAN 465
C PN+ T++ L+ K K ++ L +++ K + D TYT +I+GLC A+
Sbjct: 608 GC-GCAPNLVTYNTLIDGLCKINKVEQAAEML--EIMRKQSCTPDSITYTCLINGLCNAS 664
Query: 466 KCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+ E A+ + +EM P T +L +++ + + E++
Sbjct: 665 RLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQL 707
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 112/419 (26%), Positives = 193/419 (46%), Gaps = 48/419 (11%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKG----HIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++ L K ++D+ ALL+ M++ +IVT NTI + G+ ++A +
Sbjct: 986 YSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKL---GRIDEAYHLLE 1042
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARS-VFLELKSCIPPNAHTFNIFIHGWCKIN 251
E+ G + N T +LLD CK GK E A V + ++ PN T+N + +CK +
Sbjct: 1043 EMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKD 1102
Query: 252 RVDEAQWTIQEMKGHGCHPCVISY-----------------------------------S 276
V+ A + M GC P V+SY +
Sbjct: 1103 EVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFN 1162
Query: 277 TIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM-KI 335
TII + C+ Y YEL + +Q GC PN+VTY +++ L KS F++A + +M +
Sbjct: 1163 TIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRK 1222
Query: 336 VGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHE 395
G PD +N +I L ++ RV A ++ ++M +G+APD T++ +I+ +
Sbjct: 1223 QGCSPDIITYNTVIDGLCKSKRVDRAYKLF-LQMLSDGLAPDDVTYSIVISSLCKWRFMD 1281
Query: 396 KAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYT 455
+A +VLE M K P T+ L+ KTG D+ L ++L +++K D+ T++
Sbjct: 1282 EANNVLELMLK-NGFDPGAITYGTLIDGFCKTGNLDKAL-EILQLLLSKGSYP-DVVTFS 1338
Query: 456 LVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
+ I L + + A L + M+ + P T +L + + A + VM++
Sbjct: 1339 IFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQ 1397
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 139/288 (48%), Gaps = 23/288 (7%)
Query: 140 MVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVM--------RRFSGAGQWEDAV--- 188
++D L K +D + LL MS G + +A + +R A W D +
Sbjct: 446 LIDALCKAAAIDSAQELLR-MSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKN 504
Query: 189 RTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGW 247
R + ++ T+ N ++D LCK ++ A +F +++ + P+ T++I IH +
Sbjct: 505 RCYPDVVTY---------NSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSF 555
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
CK N +D A ++ MK C P V++YS +I C+ K +++ EM GC PN+
Sbjct: 556 CKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNL 615
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
VTY T++ L K E+A + E M+ PDS + CLI L ASR++EA V +
Sbjct: 616 VTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLR- 674
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQ 415
EM + G PD T+ T++ + E +L+EM E + N
Sbjct: 675 EMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEMEATEEGQWNAN 722
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 119/250 (47%), Gaps = 35/250 (14%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGT 196
Y +V L K R+ DQ LL EM++
Sbjct: 1196 YNSLVHGLCKSRRFDQAEYLLREMTRKQ-------------------------------- 1223
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDE 255
G + T N ++D LCK +V+ A +FL+ L + P+ T++I I CK +DE
Sbjct: 1224 -GCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDE 1282
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
A ++ M +G P I+Y T+I +C+ N K E+L + ++G P+VVT++ +
Sbjct: 1283 ANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFID 1342
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
+L+K G +A + E M G PD+ +N L+ AS ++AV +++V M + G
Sbjct: 1343 WLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEV-MRQCGCE 1401
Query: 376 PDTSTFNTMI 385
PD +T+ T++
Sbjct: 1402 PDNATYTTLV 1411
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 131/334 (39%), Gaps = 37/334 (11%)
Query: 94 NAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMD 151
N P LI F + AL I + S Y + + +D L K ++
Sbjct: 1293 NGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVV-TFSIFIDWLSKRGRLR 1351
Query: 152 QMRALLEEMSKGHIV----TLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN 207
Q LLE M + +V T NT+ ++ F A EDAV F+ + G E + T
Sbjct: 1352 QAGELLETMLRAGLVPDTVTYNTL---LKGFCDASLTEDAVDLFEVMRQCGCEPDNATYT 1408
Query: 208 LLLDTLC-----KEGKVELARSVF-------------LELKSCIPPNAHTFNIFIHGWCK 249
L+ L K+ E+++S+ LE + + + + K
Sbjct: 1409 TLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVRLGCAIVDMFGK 1468
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
+A+ + M V+ +S ++ Y + + L M +G P+ VT
Sbjct: 1469 CGSPQDARKVFEGMDQRN----VVLWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPDAVT 1524
Query: 310 YTTVMSYLAKSGDFEEAI-RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
+ ++++ +G + A+ + G +P F+C+I LGR V EA + +
Sbjct: 1525 FLSLLTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFSCVIDLLGRLGLVNEAEDL-MLG 1583
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLE 402
MP P +T+N +++ + G E+A V E
Sbjct: 1584 MP---CKPSAATWNCLLSAYKICGDFERALRVAE 1614
>gi|356515931|ref|XP_003526650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Glycine max]
Length = 461
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 189/390 (48%), Gaps = 5/390 (1%)
Query: 95 AIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMR 154
++ S LV ++ RF++ A F WA GY HS Y +M++ L K+RQ +
Sbjct: 39 GVRVSPDLVENVLKRFENAGMPAFRFFEWAEKQRGYSHSIRAYHLMIESLAKIRQYQIVW 98
Query: 155 ALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLC 214
L+ M K ++ + T +MR+++ A + ++AV TF+ + + + N N LL LC
Sbjct: 99 DLVSAMRKKGMLNVETFCIMMRKYARANKVDEAVYTFNVMDKYDVVPNLAAFNGLLSALC 158
Query: 215 KEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVIS 274
K V A+ +F +K P+ +++I + GW K + A+ +EM GC P V++
Sbjct: 159 KSNNVRKAQEIFDAMKGQFVPDEKSYSILLEGWGKAPNLPRAREVFREMVEAGCDPDVVT 218
Query: 275 YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
Y ++ C+ + E++ EM C P Y+ ++ E+AI +M
Sbjct: 219 YGIMVDVLCKAGRVDEAVEVVKEMDVGNCRPTSFIYSVLVHTYGVEHRIEDAIDTFLEMA 278
Query: 335 IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHH 394
G K D +N LI + ++ + V + EM NGVAP++ T N +I+ G
Sbjct: 279 KKGIKADVVAYNALIGAFCKVNKFKNVHRVLK-EMESNGVAPNSRTCNVIISSMIGQGQT 337
Query: 395 EKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTY 454
++AF V M KL C+P+ T+ ++K + + + L ++ M +K + + T+
Sbjct: 338 DRAFRVFCRMIKL--CEPDADTYTMMIKMFCEKNELEMAL-KIWKYMKSKQFVP-SMHTF 393
Query: 455 TLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
+ +I GLC + A ++ +EMI I P
Sbjct: 394 SALIKGLCEKDNAAKACVVMEEMIEKGIRP 423
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 158/355 (44%), Gaps = 45/355 (12%)
Query: 163 GHIVTLNTIAKVMRRFSGAGQWEDAVRTFD-ELGTFGLEKNTETMNLLLDTLCKEGKVEL 221
G V+ + + V++RF AG A R F+ G + +L++++L K + ++
Sbjct: 39 GVRVSPDLVENVLKRFENAGM--PAFRFFEWAEKQRGYSHSIRAYHLMIESLAKIRQYQI 96
Query: 222 ARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQS 281
+ ++ N TF I + + + N+VDEA +T
Sbjct: 97 VWDLVSAMRKKGMLNVETFCIMMRKYARANKVDEAVYT---------------------- 134
Query: 282 YCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS-KP 340
+N Y+++ PN+ + ++S L KS + +A I + MK G P
Sbjct: 135 ----FNVMDKYDVV---------PNLAAFNGLLSALCKSNNVRKAQEIFDAMK--GQFVP 179
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
D + ++ L+ G+A + A V++ EM E G PD T+ M+ + G ++A V
Sbjct: 180 DEKSYSILLEGWGKAPNLPRAREVFR-EMVEAGCDPDVVTYGIMVDVLCKAGRVDEAVEV 238
Query: 401 LEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHG 460
++EM+ + +C+P + L+ + + ++ + L+ + K + D+ Y +I
Sbjct: 239 VKEMD-VGNCRPTSFIYSVLVHTYGVEHRIEDAIDTFLE--MAKKGIKADVVAYNALIGA 295
Query: 461 LCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
C+ NK + + + KEM + + P +TC +I+ + + D A ++ M KL
Sbjct: 296 FCKVNKFKNVHRVLKEMESNGVAPNSRTCNVIISSMIGQGQTDRAFRVFCRMIKL 350
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 127/298 (42%), Gaps = 51/298 (17%)
Query: 94 NAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEI---------------YE 138
N ++ + + + + +F D KS + G P + E+ Y
Sbjct: 161 NNVRKAQEIFDAMKGQFVPDEKSYSILLEGWGKAPNLPRAREVFREMVEAGCDPDVVTYG 220
Query: 139 MMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAG-QWEDAVRTFDEL--- 194
+MVD+L K ++D+ +++EM G+ + I V+ G + EDA+ TF E+
Sbjct: 221 IMVDVLCKAGRVDEAVEVVKEMDVGNCRPTSFIYSVLVHTYGVEHRIEDAIDTFLEMAKK 280
Query: 195 -------------GTF-------------------GLEKNTETMNLLLDTLCKEGKVELA 222
G F G+ N+ T N+++ ++ +G+ + A
Sbjct: 281 GIKADVVAYNALIGAFCKVNKFKNVHRVLKEMESNGVAPNSRTCNVIISSMIGQGQTDRA 340
Query: 223 RSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSY 282
VF + P+A T+ + I +C+ N ++ A + MK P + ++S +I+
Sbjct: 341 FRVFCRMIKLCEPDADTYTMMIKMFCEKNELEMALKIWKYMKSKQFVPSMHTFSALIKGL 400
Query: 283 CRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
C + N +K +++EM +G P+ +T+ + L K G + + EKM ++ +P
Sbjct: 401 CEKDNAAKACVVMEEMIEKGIRPSRITFGRLRQLLIKEGREDVLKFLHEKMNLLVKEP 458
>gi|15239161|ref|NP_201383.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170571|sp|Q9FH87.1|PP447_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g65820
gi|9758569|dbj|BAB09050.1| unnamed protein product [Arabidopsis thaliana]
gi|332010728|gb|AED98111.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 208/411 (50%), Gaps = 8/411 (1%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS 161
L+ ++++R D F WA P Y HS E+Y+ MV IL K+RQ + L+EEM
Sbjct: 115 LIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMR 174
Query: 162 KGH--IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV 219
K + ++ +++RF+ A + A+ DE+ FG E + LLD LCK G V
Sbjct: 175 KENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSV 234
Query: 220 ELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
+ A +F +++ P N F ++GWC++ ++ EA++ + +M G P ++ Y+ ++
Sbjct: 235 KDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLL 294
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
Y + Y+LL +M+ +G PN YT ++ L K EEA+++ +M+ +
Sbjct: 295 SGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECE 354
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
D + L+ + ++ + Y+ +M + G+ P T+ ++ E+
Sbjct: 355 ADVVTYTALVSGFCKWGKI-DKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLE 413
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIH 459
++E+M ++E+ P++ ++ +++ K G+ E + +L ++M ++ LS + T+ ++I+
Sbjct: 414 LMEKMRQIEY-HPDIGIYNVVIRLACKLGEVKEAV-RLWNEM-EENGLSPGVDTFVIMIN 470
Query: 460 GLCRANKCEWAYLLFKEMIGHDI--TPRYQTCRLILDEVKQKHMYDAAEKI 508
GL A FKEM+ + +Y T +L+L+ V + + A+ +
Sbjct: 471 GLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDV 521
>gi|254939549|ref|NP_001157212.1| pentatricopeptide repeat10 [Zea mays]
gi|218684531|gb|ACL01094.1| chloroplast pentatricopeptide repeat protein 10 [Zea mays]
gi|223948163|gb|ACN28165.1| unknown [Zea mays]
gi|413943497|gb|AFW76146.1| pentatricopeptide repeat10 [Zea mays]
Length = 786
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 202/405 (49%), Gaps = 12/405 (2%)
Query: 114 WKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEE--MSKGHIVTLNTI 171
W+ AL + RWAG + S+ EM+V LG+ Q D + ALL+E + G + +
Sbjct: 120 WEWALALLRWAGKEGAADASA--LEMVVRALGREGQHDAVCALLDETPLPPGSRLDVRAY 177
Query: 172 AKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFL--EL 229
V+ S AG++E A+ F EL G+ T N++LD + G+ R V L E+
Sbjct: 178 TTVLHALSRAGRYERALELFAELRRQGVAPTLVTYNVVLDVYGRMGR-SWPRIVALLDEM 236
Query: 230 KSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
++ + P+ T + I C+ VDEA +++K G PCV++Y+ ++Q + + N+
Sbjct: 237 RAAGVEPDGFTASTVIAACCRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNY 296
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
++ +L EM+ GC P+ VTY + A++G FEEA R + M G P++ +N +
Sbjct: 297 TEALRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLDTMASKGLLPNAFTYNTV 356
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
+ G +V EA+ ++ +M + G P+ +T+N ++ M +L EM++
Sbjct: 357 MTAYGNVGKVDEALALFD-QMKKTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMSR-S 414
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
C PN T++ +L C K G D ++++L+ M + L TY +I R
Sbjct: 415 GCTPNRVTWNTMLAVCGKRGMEDY-VTRVLEGM-RSCGVELSRDTYNTLIAAYGRCGSRT 472
Query: 469 WAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
A+ ++ EM TP T +L+ + ++ + A+ I + M+
Sbjct: 473 NAFKMYNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSKMR 517
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 98/451 (21%), Positives = 186/451 (41%), Gaps = 80/451 (17%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKG----HIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++ + GK + +L EM + VT N +A R AG +E+A R D
Sbjct: 283 YNALLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTYAR---AGFFEEAARCLD 339
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKIN 251
+ + GL N T N ++ GKV+ A ++F ++K + PN +T+N+ + K +
Sbjct: 340 TMASKGLLPNAFTYNTVMTAYGNVGKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKS 399
Query: 252 RVDEAQWTIQEMKGHGCHP------------------------------CVI-----SYS 276
R + EM GC P C + +Y+
Sbjct: 400 RFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMRSCGVELSRDTYN 459
Query: 277 TIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIV 336
T+I +Y R + + +++ +EM + G P + TY +++ L++ GD+ A I KM+
Sbjct: 460 TLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTK 519
Query: 337 GSKPDSRFFNCLIYTLGRASRV------------QEAVYVYQV----------------- 367
G KP+ + ++ L+ + V AV+ V
Sbjct: 520 GFKPNEQSYSLLLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVILRTLVIANFKCRRLDG 579
Query: 368 ------EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLL 421
E+ G PD FN+M+++++ +G + KA V + + K P++ T++ L+
Sbjct: 580 METAFQEVKARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSI-KRSGLSPDLITYNSLM 638
Query: 422 KSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHD 481
K ++ E ++L+ + + D+ +Y VI+G C+ + A + EM+
Sbjct: 639 DMYAKCSESWEA-EKILNQLKCSQTMKPDVVSYNTVINGFCKQGLVKEAQRVLSEMVADG 697
Query: 482 ITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
+ P T ++ M+ A ++ M
Sbjct: 698 MAPCAVTYHTLVGGYSSLEMFSEAREVIGYM 728
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 146/316 (46%), Gaps = 15/316 (4%)
Query: 126 SCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGH----IVTLNTIAKVMRRFSGA 181
SC G E S + Y ++ G+ + EM+ I T N + V+ R
Sbjct: 448 SC-GVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSR---Q 503
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHT 239
G W A ++ T G + N ++ +LLL K G V ++ E+ + P+
Sbjct: 504 GDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVI 563
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+ K R+D + QE+K G +P ++ +++++ Y + +SK E+ D ++
Sbjct: 564 LRTLVIANFKCRRLDGMETAFQEVKARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIK 623
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS-KPDSRFFNCLIYTLGRASRV 358
G P+++TY ++M AK + EA +I ++K + KPD +N +I + V
Sbjct: 624 RSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKCSQTMKPDVVSYNTVINGFCKQGLV 683
Query: 359 QEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH-CKPNVQTF 417
+EA V EM +G+AP T++T++ +S +A V+ M ++H KP T+
Sbjct: 684 KEAQRVLS-EMVADGMAPCAVTYHTLVGGYSSLEMFSEAREVIGYM--VQHGLKPMELTY 740
Query: 418 HPLLKSCFKTGKTDEC 433
+++S + + +E
Sbjct: 741 RRVVESYCRAKRFEEA 756
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 156/349 (44%), Gaps = 6/349 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
+ M+ + GK D + +LE M S G ++ +T ++ + G +A + ++E+
Sbjct: 423 WNTMLAVCGKRGMEDYVTRVLEGMRSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMT 482
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVD 254
+ G T N LL+ L ++G A+S+ ++++ PN ++++ + + K V
Sbjct: 483 SAGFTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGGNVA 542
Query: 255 EAQWTIQEMKGHGC-HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
E+ G G P + T++ + + + E++A+G P++V + ++
Sbjct: 543 GIAAIENEVYGSGAVFPSWVILRTLVIANFKCRRLDGMETAFQEVKARGYNPDLVIFNSM 602
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
+S AK+G + +A + + +K G PD +N L+ + S EA +
Sbjct: 603 LSIYAKNGMYSKATEVFDSIKRSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKCSQT 662
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
+ PD ++NT+I F G ++A VL EM + P T+H L+ E
Sbjct: 663 MKPDVVSYNTVINGFCKQGLVKEAQRVLSEMVA-DGMAPCAVTYHTLVGGYSSLEMFSEA 721
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
+++ MV +H L TY V+ CRA + E A E+ D+
Sbjct: 722 -REVIGYMV-QHGLKPMELTYRRVVESYCRAKRFEEARGFLSEVSETDL 768
>gi|356557306|ref|XP_003546958.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Glycine max]
Length = 654
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 205/416 (49%), Gaps = 22/416 (5%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS 161
L +++ R D A + WA G+ + Y+ M+ +L ++RQ + AL+EEM
Sbjct: 124 LTERVLSRCGDAGNLAYRFYSWASKQSGHRLDHDAYKAMIKVLSRMRQFGAVWALIEEMR 183
Query: 162 K--GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV 219
+ H++T +MRRF+ A AV DE+ +G E + LLD LCK G V
Sbjct: 184 QENPHLITPQVFVILMRRFASARMVHKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSV 243
Query: 220 ELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
+ A S+F +++ P+ F ++GWCK ++ EA+ + +MK G P ++ Y+ ++
Sbjct: 244 KEAASLFEDMRYRWKPSVKHFTSLLYGWCKEGKLMEAKHVLVQMKDMGIEPDIVVYNNLL 303
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
Y + Y+LL EM+ + C PN +YT ++ L K EEA R+ +M+ G +
Sbjct: 304 GGYAQAGKMGDAYDLLKEMRRKRCEPNATSYTVLIQSLCKHERLEEATRLFVEMQTNGCQ 363
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
D ++ LI + +++ Y EM + G P+ + ++ E+
Sbjct: 364 ADVVTYSTLISGFCKWGKIKRG-YELLDEMIQQGHFPNQVIYQHIMLAHEKKEELEECKE 422
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIH 459
++ EM K+ C P++ ++ +++ K G+ E + QL ++M LS + T+ ++I+
Sbjct: 423 LVNEMQKI-GCAPDLSIYNTVIRLACKLGEVKEGI-QLWNEM-ESSGLSPGMDTFVIMIN 479
Query: 460 GL----CRANKCEWAYLLFKEMIGHDI--TPRYQTCRLILDEVKQKHMYDAAEKIE 509
G C CE+ FKEM+G + P+Y T + +++ + + AEK+E
Sbjct: 480 GFLEQGCLVEACEY----FKEMVGRGLFTAPQYGTLKELMNSLLR------AEKLE 525
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 121/431 (28%), Positives = 215/431 (49%), Gaps = 11/431 (2%)
Query: 89 QDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGK 146
Q + ++P H N +I A G+F+ G + + Y +++D L K
Sbjct: 319 QQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMID-KGVKPDNLTYTIIIDGLCK 377
Query: 147 VRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTET 205
+ +D+ + ++M KG T ++ + GQWE+ V+ E+ LE + T
Sbjct: 378 AQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFT 437
Query: 206 MNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
LLLD LCK GK ARS+F + + I P+ + I +HG+ K + E + M
Sbjct: 438 YGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMV 497
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
+G P ++T+I +Y ++ +V + +M+ QG PNVVTY T++ L K G +
Sbjct: 498 ANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVD 557
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTM 384
+A+ +M G P++ FN L+Y L + ++ ++ +EM G+ PD FNT+
Sbjct: 558 DAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELF-LEMLNQGIRPDIVFFNTV 616
Query: 385 ITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS-CFKTGKTDECLSQLLDDMVN 443
+ G +A +++ M + KP+V +++ L+ CF + + DE + +LLD MV+
Sbjct: 617 LCNLCKEGRVMEARRLIDSMVCM-GLKPDVISYNTLIDGHCFAS-RMDEAV-KLLDGMVS 673
Query: 444 KHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYD 503
L +I +Y ++HG C+A + + AY LF+EM+ +TP +T IL+ + + +
Sbjct: 674 AG-LKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFS 732
Query: 504 AAEKIEAVMKK 514
A ++ M K
Sbjct: 733 EARELYVNMIK 743
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/386 (27%), Positives = 185/386 (47%), Gaps = 18/386 (4%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGH-------IVTLNTIAKVMRRFSGAGQWEDAVR 189
Y ++ L R+ ++ R LL M G +V+ N V+ F GQ + A
Sbjct: 158 YNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNI---VINGFFNEGQVDKAYS 214
Query: 190 TFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWC 248
F E+G + + T N ++D LCK +V+ A VF ++ + + PN T+N I G C
Sbjct: 215 LFLEMG---VSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLC 271
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
K VD A+ Q+M G P ++Y+TII C+ + + +M +G P+ V
Sbjct: 272 KAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHV 331
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
TY T++ L K+ ++A + ++M G KPD+ + +I L +A V A V+Q +
Sbjct: 332 TYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQ-Q 390
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M + GV P+ T+N +I + G E+ ++EM+ +P+V T+ LL K G
Sbjct: 391 MIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSA-HDLEPDVFTYGLLLDYLCKNG 449
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
K +E S L D M+ K + +T Y +++HG + + L M+ + I+P ++
Sbjct: 450 KCNEARS-LFDSMIRK-GIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRI 507
Query: 489 CRLILDEVKQKHMYDAAEKIEAVMKK 514
++ ++ M D I MK+
Sbjct: 508 FNTVICAYAKRAMIDEVMHIFIKMKQ 533
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 120/488 (24%), Positives = 221/488 (45%), Gaps = 16/488 (3%)
Query: 34 HIVSSSPIESYCSDGARLDHHQVL--CVDSPRLPD---IDVIISKVHVGSSEDEVFQSLK 88
H+ ++ I+ C A V +D PD +II + S D + +
Sbjct: 330 HVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRA-EGVF 388
Query: 89 QDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGK 146
Q + ++P++ N LIH + W+ + + S E Y +++D L K
Sbjct: 389 QQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEM-SAHDLEPDVFTYGLLLDYLCK 447
Query: 147 VRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGA-GQWEDAVRTFDELGTFGLEKNTET 205
+ ++ R+L + M + I TI +M G G + + + G+ N
Sbjct: 448 NGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRI 507
Query: 206 MNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
N ++ K ++ +F+++K + PN T+ I CK+ RVD+A +M
Sbjct: 508 FNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMI 567
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
G P + +++++ C + KV EL EM QG P++V + TV+ L K G
Sbjct: 568 NEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVM 627
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTM 384
EA R+ + M +G KPD +N LI ASR+ EAV + M G+ P+ ++NT+
Sbjct: 628 EARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLD-GMVSAGLKPNIVSYNTL 686
Query: 385 ITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK 444
+ + G + A+ + EM + + P V+T++ +L F++G+ E +L +M+
Sbjct: 687 LHGYCKAGRIDNAYCLFREMLR-KGVTPGVETYNTILNGLFRSGRFSEA-RELYVNMIKS 744
Query: 445 HHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYD 503
L I TY++++ G C+ N + A+ +F+ + D+ T +++D + K D
Sbjct: 745 RKL-WSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKED 803
Query: 504 AAEKIEAV 511
A + A+
Sbjct: 804 AMDLFAAI 811
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 149/312 (47%), Gaps = 18/312 (5%)
Query: 205 TMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTI-QE 262
T ++++ C+ G++EL + F L LK+ + N + G C RV EA + ++
Sbjct: 86 TYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLLRQ 145
Query: 263 MKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM---QAQGCPPNVVTYTTVMSYLAK 319
M GC V+SY+T+++ C + + ELL M Q C P+VV+Y V++
Sbjct: 146 MPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFN 205
Query: 320 SGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTS 379
G ++A + +M G PD +N +I L +A V A V+Q +M E GV P+
Sbjct: 206 EGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQ-QMVEKGVKPNNV 261
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC---LSQ 436
T+NT+I + A V ++M + KP+ T++ ++ K D Q
Sbjct: 262 TYNTIIDGLCKAQEVDMAEGVFQKMVD-KGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQ 320
Query: 437 LLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV 496
++D V H+ TY +I GLC+A + A +F++MI + P T +I+D +
Sbjct: 321 MIDRGVKPDHV-----TYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGL 375
Query: 497 KQKHMYDAAEKI 508
+ D AE +
Sbjct: 376 CKAQSVDRAEGV 387
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 127/276 (46%), Gaps = 9/276 (3%)
Query: 127 CPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAG 182
C G + Y ++D +MD+ LL+ M K +IV+ NT+ + + AG
Sbjct: 638 CMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTL---LHGYCKAG 694
Query: 183 QWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFN 241
+ ++A F E+ G+ ET N +L+ L + G+ AR +++ + KS + T++
Sbjct: 695 RIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYS 754
Query: 242 IFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ 301
I + G+CK N DEA Q + +I+++ +I + +L + A
Sbjct: 755 IILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPAN 814
Query: 302 GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
G P+VVTY + L + G EE + M+ G+ P+S N LI L + A
Sbjct: 815 GLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRA 874
Query: 362 VYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKA 397
Y ++ E + + ST + +I++FS + + A
Sbjct: 875 -GAYLSKLDEKNFSLEASTTSMLISLFSREEYQQHA 909
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 7/206 (3%)
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
P+ TY+ V+ + G E + G + D N L+ L RV EA++V
Sbjct: 82 PDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHV 141
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM--NKLEHCKPNVQTFHPLLK 422
+MPE G ++NT++ E+A +L M + C P+V +++ ++
Sbjct: 142 LLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVIN 201
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
F G+ D+ S L+ +S D+ TY +I GLC+A + + A +F++M+ +
Sbjct: 202 GFFNEGQVDKAYSLFLE-----MGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGV 256
Query: 483 TPRYQTCRLILDEVKQKHMYDAAEKI 508
P T I+D + + D AE +
Sbjct: 257 KPNNVTYNTIIDGLCKAQEVDMAEGV 282
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/367 (28%), Positives = 178/367 (48%), Gaps = 20/367 (5%)
Query: 149 QMDQMRALLEEMSKGH------IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKN 202
++D+ L + M+ G +V N + K R G+ DA R F LG
Sbjct: 165 EIDEALVLFDSMASGGGRNCPPVVPCNILIK---RLCSDGRVSDAERVFAALGP---SAT 218
Query: 203 TETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQE 262
T N +++ C+ G++E AR + + PP+ TFN I C R+ +A +
Sbjct: 219 VVTYNTMVNGYCRAGRIEDARRLINGMP--FPPDTFTFNPLIRALCVRGRIPDALAVFDD 276
Query: 263 MKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGD 322
M GC P V++YS ++ + C++ + + LLDEM+A+GC P++VTY +++ + GD
Sbjct: 277 MLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGD 336
Query: 323 FEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFN 382
+EA+ I + G KPD+ + ++ +L + R +E V EM N APD TFN
Sbjct: 337 VDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKE-VEELLAEMTSNNCAPDEVTFN 395
Query: 383 TMITMFSHHGHHEKAFHVLEEMNKLEH-CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDM 441
T++T G ++A V++ M+ EH C ++ T+ +L G+ D+ + L
Sbjct: 396 TIVTSLCQQGLVDRAIEVVDHMS--EHGCVADIVTYSSILDGLCDVGRVDDAVELL--SR 451
Query: 442 VNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHM 501
+ + D YT V+ GLC + E A L EM+ D P T ++ + QK +
Sbjct: 452 LKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGL 511
Query: 502 YDAAEKI 508
D A ++
Sbjct: 512 VDRAIRV 518
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 121/492 (24%), Positives = 211/492 (42%), Gaps = 62/492 (12%)
Query: 55 QVLCVDSPRLPD-IDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDD 113
+ LCV R+PD + V +H G S V S+ D C +
Sbjct: 259 RALCVRG-RIPDALAVFDDMLHRGCSPSVVTYSILLDATCK----------------ESG 301
Query: 114 WKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIA 172
++ A+ + + G E Y ++++ + +D+ +L + S G T
Sbjct: 302 YRQAMALLDEMRA-KGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYT 360
Query: 173 KVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-- 230
V++ G+ +W++ E+ + + T N ++ +LC++G V+ A V +
Sbjct: 361 PVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEH 420
Query: 231 SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSK 290
C+ + T++ + G C + RVD+A + +K +GC P I+Y+T+++ C + +
Sbjct: 421 GCVA-DIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWER 479
Query: 291 VYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIY 350
EL+ EM CPP+ VT+ TV++ L + G + AIR+ E+M G PD +NC+I
Sbjct: 480 AEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIID 539
Query: 351 TLGRASRVQEAVYVYQ----------------------------------VEMPENGVAP 376
L S + +A+ + M + P
Sbjct: 540 GLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPP 599
Query: 377 DTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQ 436
D TFNT+IT G +A L+ M + C PN T+ ++ + K GK L +
Sbjct: 600 DELTFNTVITSLCQKGLLTQAIETLKIMAE-NGCVPNSSTYSIVVDALLKAGKAQAAL-E 657
Query: 437 LLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV 496
LL M N + D+ TY VI L +A K E A L + M+ + + P T R + V
Sbjct: 658 LLSGMTNG---TPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGV 714
Query: 497 KQKHMYDAAEKI 508
++ D A ++
Sbjct: 715 CREDGTDRAVRM 726
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 176/350 (50%), Gaps = 8/350 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
+ +V L + +D+ +++ MS+ G + + T + ++ G+ +DAV L
Sbjct: 394 FNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLK 453
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVD 254
++G + +T +L LC + E A + E L S PP+ TFN + C+ VD
Sbjct: 454 SYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVD 513
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
A +++M +GC P +++Y+ II C + ELL ++Q+ GC P++VT+ T++
Sbjct: 514 RAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLL 573
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
L +E+A ++ M PD FN +I +L + + +A+ ++ M ENG
Sbjct: 574 KGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKI-MAENGC 632
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
P++ST++ ++ G + A +L M + P++ T++ ++ + K GK +E L
Sbjct: 633 VPNSSTYSIVVDALLKAGKAQAALELLSGMT---NGTPDLITYNTVISNLTKAGKMEEAL 689
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
LL MV+ + L D TTY + +G+CR + + A + + + ++P
Sbjct: 690 -DLLRVMVS-NGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSP 737
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 107/420 (25%), Positives = 190/420 (45%), Gaps = 13/420 (3%)
Query: 98 PSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALL 157
P N LI R D + + +A G + Y MV+ + +++ R L+
Sbjct: 185 PPVVPCNILIKRLCSDGRVSDAERVFAAL--GPSATVVTYNTMVNGYCRAGRIEDARRLI 242
Query: 158 EEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKE 216
M T N + +R G+ DA+ FD++ G + T ++LLD CKE
Sbjct: 243 NGMPFPPDTFTFNPL---IRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKE 299
Query: 217 GKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVIS 274
A ++ E+ K C P+ T+N+ I+ C VDEA + + HGC P ++
Sbjct: 300 SGYRQAMALLDEMRAKGC-EPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVT 358
Query: 275 YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
Y+ +++S C + +V ELL EM + C P+ VT+ T+++ L + G + AI + + M
Sbjct: 359 YTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMS 418
Query: 335 IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHH 394
G D ++ ++ L RV +AV + + G PDT + T++
Sbjct: 419 EHGCVADIVTYSSILDGLCDVGRVDDAVELLS-RLKSYGCKPDTIAYTTVLKGLCSTEQW 477
Query: 395 EKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTY 454
E+A ++ EM C P+ TF+ ++ S + G D + + + ++++ S DI TY
Sbjct: 478 ERAEELMAEM-LCSDCPPDEVTFNTVVASLCQKGLVDRAIRVV--EQMSENGCSPDIVTY 534
Query: 455 TLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
+I GLC + + A L ++ P T +L + ++ AE++ A M +
Sbjct: 535 NCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMR 594
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 141/352 (40%), Gaps = 77/352 (21%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM----SKGHIVTLNTIAKVMRRFSGAGQW 184
G + + Y ++ L Q ++ L+ EM VT NT V+ G
Sbjct: 456 GCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNT---VVASLCQKGLV 512
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIF 243
+ A+R +++ G + T N ++D LC E ++ A + +L+SC P+ TFN
Sbjct: 513 DRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTL 572
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
+ G C ++R ++A+ + M C P ++++T+I S C++ ++ E L M GC
Sbjct: 573 LKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGC 632
Query: 304 PPN---------------------------------VVTYTTVMSYLAKSGDFEEA---- 326
PN ++TY TV+S L K+G EEA
Sbjct: 633 VPNSSTYSIVVDALLKAGKAQAALELLSGMTNGTPDLITYNTVISNLTKAGKMEEALDLL 692
Query: 327 -------------------------------IRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
+R+ +++ G PD+ F+N ++ R
Sbjct: 693 RVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRD 752
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKL 407
R A+ + M +G PD ST+ ++ ++ G ++A +L + L
Sbjct: 753 RRTDLAIDCF-AHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLASLCSL 803
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 116/284 (40%), Gaps = 28/284 (9%)
Query: 77 GSSEDEVFQSLKQDHVCN--AIQPSHYLVNKL--------IHRFKDDWKSALGIFRWA-- 124
G S D V + D +CN I + L++ L I F K G+ RW
Sbjct: 526 GCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDA 585
Query: 125 ---------GSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKV 174
+CP E + + ++ L + + Q L+ M++ G + +T + V
Sbjct: 586 EQLMANMMRSNCPPDELT---FNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIV 642
Query: 175 MRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCI 233
+ AG+ + A+ G + T N ++ L K GK+E A + + + + +
Sbjct: 643 VDALLKAGKAQAALELLS--GMTNGTPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGL 700
Query: 234 PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
P+ T+ +G C+ + D A ++ ++ G P Y+ ++ +CR +
Sbjct: 701 CPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAID 760
Query: 294 LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
M + GC P+ TY ++ LA G +EA R+ + +G
Sbjct: 761 CFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLASLCSLG 804
>gi|297797613|ref|XP_002866691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312526|gb|EFH42950.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 638
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 200/397 (50%), Gaps = 20/397 (5%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS 161
L+ ++++R D F WA P Y HS E+Y+ MV IL K+RQ + L+EEM
Sbjct: 116 LIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMR 175
Query: 162 KGH--IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV 219
K + ++ +++RF+ A + A+ DE+ TFGLE + LLD LCK G V
Sbjct: 176 KENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPTFGLEPDEYVFGCLLDALCKHGSV 235
Query: 220 ELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
+ A +F +++ P N F ++GWC+ ++ EA++ + +MK G P ++ Y+ ++
Sbjct: 236 KDAAKLFEDMRLRFPVNLRYFTSLLYGWCREEKMMEAKYVLVQMKEAGFEPDIVDYTNLL 295
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
Y + Y+LL +M+ +G PN YT ++ L K EEA+++ +M+ +
Sbjct: 296 SGYANAGKMADAYDLLKDMRRRGFEPNATCYTVLIQALCKVDRMEEAMKVFVEMERYECE 355
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
D + L+ + ++ + Y+ +M + G+ P T+ + + + H EK
Sbjct: 356 ADVVTYTALVSGFCKWGKI-DKCYLVLDDMIKKGLMPSQLTY---MHIMAAHEKKEKLIE 411
Query: 400 VLEEMNKLEHCK--PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLV 457
LE M K++ + P++ ++ +++ K G+ E + +L ++M + LS T+ ++
Sbjct: 412 CLELMEKMKQIEYHPDIGIYNVVIRLACKLGEVKEAV-RLWNEM-EGNGLSPGADTFVII 469
Query: 458 IHGL----CRANKCEWAYLLFKEMIGHDI--TPRYQT 488
I+GL C C+ FKEM+ + P+Y T
Sbjct: 470 INGLTSQGCLLEACDH----FKEMVARGLFSVPQYGT 502
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 201/411 (48%), Gaps = 40/411 (9%)
Query: 113 DWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEE-MSKGHIVTLNTI 171
D +AL F WA G++H+ Y + + L + R++D+ +L+ G + T
Sbjct: 3 DPDAALRFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTY 62
Query: 172 AKVMRRFSGAGQWEDAVRTFDELGTFG--------------------------------L 199
A V++ +G + A +E+ G
Sbjct: 63 AVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMEC 122
Query: 200 EKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQW 258
EKN T +++D LCK ++ A + F ++K PN T+N+ I+G+CK+++V A
Sbjct: 123 EKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYL 182
Query: 259 TIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLA 318
++EMK G P V++YST+I +CRQ Y+L +M GC PN+VTY T++S L
Sbjct: 183 LLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLC 242
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG-VAPD 377
++G +EA + ++M+ G +PD ++ L+ L + ++ A+ V+ E NG PD
Sbjct: 243 RNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVF--EDNSNGDCPPD 300
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
++T+I G ++A + E+M + C+P+V TF L+ K + E Q+
Sbjct: 301 VVAYSTLIAGLCKAGRLDEACKLFEKMRE-NSCEPDVVTFTALMDGLCKGDRLQEA-QQV 358
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
L+ M ++ + + ++ TY+ +I GLC+ + A +FK MI I P T
Sbjct: 359 LETMEDR-NCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVT 408
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 184/363 (50%), Gaps = 14/363 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGH----IVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y+ ++ L K ++D + E+ S G +V +T+ + AG+ ++A + F+
Sbjct: 269 YDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTL---IAGLCKAGRLDEACKLFE 325
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKI 250
++ E + T L+D LCK +++ A+ V +E ++C P N T++ I G CK
Sbjct: 326 KMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTP-NVITYSSLIDGLCKT 384
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
+V +AQ + M G P V++Y+++I +C L++EM A GC P+++TY
Sbjct: 385 GQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITY 444
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
T++ L K+G EA R+ MK PD ++CLI + R+ A ++ +M
Sbjct: 445 NTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFD-DML 503
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKT 430
+ V PD TF+T++ + + G + A +LEEM C P+V T+ L+ K G+
Sbjct: 504 KQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVA-SDCSPDVYTYTSLVDGFCKVGRM 562
Query: 431 DECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCR 490
E ++L M K ++ TYT +I CRA K AY L +EM+G+ + P T R
Sbjct: 563 VEA-RRVLKRMA-KRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYR 620
Query: 491 LIL 493
++
Sbjct: 621 SLI 623
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 187/363 (51%), Gaps = 9/363 (2%)
Query: 154 RALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTL 213
R ++E ++VT NT+ + R G ++A DE+ GL+ + + + L+ L
Sbjct: 220 RQMVENGCMPNLVTYNTLLSGLCR---NGLMDEAYELLDEMRERGLQPDKFSYDTLMAGL 276
Query: 214 CKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCV 272
CK GK+++A VF + + PP+ ++ I G CK R+DEA ++M+ + C P V
Sbjct: 277 CKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDV 336
Query: 273 ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEK 332
++++ ++ C+ + ++L+ M+ + C PNV+TY++++ L K+G +A + ++
Sbjct: 337 VTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKR 396
Query: 333 MKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
M + G +P+ +N LI+ + V A+ + + EM G PD T+NT+I G
Sbjct: 397 MIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLME-EMTATGCLPDIITYNTLIDGLCKTG 455
Query: 393 HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
+A + +M K + C P+V T+ L+ K + D + L DDM+ + L D+
Sbjct: 456 RAPEANRLFGDM-KAKFCNPDVITYSCLIGGFCKLERIDMART-LFDDMLKQAVLP-DVV 512
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEAV 511
T++ ++ G C A + A L +EM+ D +P T ++D K M +A ++ +
Sbjct: 513 TFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRM 572
Query: 512 MKK 514
K+
Sbjct: 573 AKR 575
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 172/377 (45%), Gaps = 8/377 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
+ ++D L K ++ + + +LE M + + T + ++ GQ DA F +
Sbjct: 339 FTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMI 398
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS--CIPPNAHTFNIFIHGWCKINRV 253
G+E N T N L+ C V+ A + E+ + C+P + T+N I G CK R
Sbjct: 399 VRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLP-DIITYNTLIDGLCKTGRA 457
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
EA +MK C+P VI+YS +I +C+ L D+M Q P+VVT++T+
Sbjct: 458 PEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTL 517
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
+ +G ++A R+ E+M PD + L+ + R+ EA V + M + G
Sbjct: 518 VEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLK-RMAKRG 576
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
P+ T+ +I F G A+ +LEEM +PNV T+ L+ TG +E
Sbjct: 577 CQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVG-NGVQPNVITYRSLIGGFCGTGDLEEA 635
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT-CRLI 492
++L+ + + D+ Y +++ GLCR + A L + + PR+ LI
Sbjct: 636 -RKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALI 694
Query: 493 LDEVKQKHMYDAAEKIE 509
+ K + A E +E
Sbjct: 695 RGLCQGKELGKAMEVLE 711
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 173/367 (47%), Gaps = 12/367 (3%)
Query: 82 EVFQSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEM 139
EVF+ + + I+P+ N LIH F + SAL + + G Y
Sbjct: 392 EVFKRM----IVRGIEPNVVTYNSLIHGFCMTNGVDSAL-LLMEEMTATGCLPDIITYNT 446
Query: 140 MVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
++D L K + + L +M +K + T + ++ F + + A FD++
Sbjct: 447 LIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQA 506
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQ 257
+ + T + L++ C G V+ A + E+ S P+ +T+ + G+CK+ R+ EA+
Sbjct: 507 VLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEAR 566
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
++ M GC P V++Y+ +I ++CR + Y LL+EM G PNV+TY +++
Sbjct: 567 RVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGF 626
Query: 318 AKSGDFEEAIRITEKM-KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
+GD EEA +I E++ + K D + ++ L R R+ A+ + + + ++G P
Sbjct: 627 CGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEA-IKQSGTPP 685
Query: 377 DTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQ 436
+ +I KA VLEEM +PN + + +++ + G+ +E +
Sbjct: 686 RHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEA-NA 744
Query: 437 LLDDMVN 443
L D+++
Sbjct: 745 LADELLG 751
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 115/244 (47%), Gaps = 9/244 (3%)
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
V +Y+ + ++ R + +L G PNV TY V+ L KSGD ++A + E
Sbjct: 24 VYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKACELLE 83
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAV-YVYQVEMPENGVAPDTSTFNTMITMFSH 390
+M+ G PD+ +N +I+ L +A +A+ Y +E +N + T+ MI
Sbjct: 84 EMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEKNVI-----TWTIMIDGLCK 138
Query: 391 HGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLD 450
+A +M K + PN T++ L+ K K + LL + + L+ +
Sbjct: 139 ANRLPEATTYFAKMKK-KGTVPNEWTYNVLINGFCKVHKVHR--AYLLLKEMKESGLAPN 195
Query: 451 ITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEA 510
+ TY+ VIHG CR K + AY LF++M+ + P T +L + + + D A ++
Sbjct: 196 VVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLD 255
Query: 511 VMKK 514
M++
Sbjct: 256 EMRE 259
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 105/344 (30%), Positives = 181/344 (52%), Gaps = 8/344 (2%)
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSC 232
++R AGQ DAV F E+ ++ T N +++ L K +++ A + E+ +
Sbjct: 16 ILRGLCDAGQCSDAVLHFREMSKT-CPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNG 74
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
PN ++N +HG+CK NRV+ A W +++M GC P V+SY+T+I C+ +
Sbjct: 75 FAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEAC 134
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
++D+M +GC PNV+TY T++ + GD + A+ + KM G +P++ +N +++ L
Sbjct: 135 RVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGL 194
Query: 353 GRASRVQEAVYVYQVEMPENG-VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCK 411
++ A+ +++ EM E+G PD T++T++ G + A ++E M + C
Sbjct: 195 CSGRKLDSALQLFK-EMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVS-KGCS 252
Query: 412 PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAY 471
PNV T+ LL K GK DE + LL M + S +I TY +I G C+ + + AY
Sbjct: 253 PNVVTYSSLLHGLCKAGKLDEA-TALLQRM-TRSGCSPNIVTYNTIIDGHCKLGRIDEAY 310
Query: 472 LLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEAVMKK 514
L +EM+ P T ++LD K DA +E +++K
Sbjct: 311 HLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEK 354
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 195/392 (49%), Gaps = 12/392 (3%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKG-----HIVTLNTIAKVMRRFSGAGQ 183
GY ++ Y ++ L R++D L +EM + + T +TI + + +G+
Sbjct: 179 GYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVK---SGK 235
Query: 184 WEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNI 242
+DA R + + + G N T + LL LCK GK++ A ++ + +S PN T+N
Sbjct: 236 VDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNT 295
Query: 243 FIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
I G CK+ R+DEA ++EM GC P V++Y+ ++ ++C+ L++ M +G
Sbjct: 296 IIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKG 355
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
PN+ TY +++ K + E A ++ M G P+ +N +I L +A++V E V
Sbjct: 356 YVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGV 415
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLK 422
+ + +M N PD TFNT+I + A+ + + + C PN+ T++ L+
Sbjct: 416 LLLE-QMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQE-SGCTPNLVTYNSLVH 473
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
K+ + D+ LL +M K S DI TY VI GLC++ + + AY LF +M+ +
Sbjct: 474 GLCKSRRFDQA-EYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGL 532
Query: 483 TPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
P T +++ + + D A + +M K
Sbjct: 533 APDDVTYSIVISSLCKWRFMDEANNVLELMLK 564
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 116/427 (27%), Positives = 196/427 (45%), Gaps = 82/427 (19%)
Query: 157 LEEMSKG---HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTL 213
EMSK VT NT+ + S + + +DA+R +E+ G N + N +L
Sbjct: 33 FREMSKTCPPDSVTYNTM---INGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGF 89
Query: 214 CKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPC 271
CK +VE A + + ++ C PP+ ++ I+G CK+++VDEA + +M GC P
Sbjct: 90 CKANRVENALWLLEQMVMRGC-PPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPN 148
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQG----------------------------- 302
VI+Y T++ +CR + EL+ +M +G
Sbjct: 149 VITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFK 208
Query: 303 -------CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
CPP+V TY+T++ L KSG ++A R+ E M G P+ ++ L++ L +A
Sbjct: 209 EMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKA 268
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQ 415
++ EA + Q M +G +P+ T+NT+I G ++A+H+LEEM C+PNV
Sbjct: 269 GKLDEATALLQ-RMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVD-GGCQPNVV 326
Query: 416 TFHPLLKSCFKTGKTDECLS----------------------------------QLLDDM 441
T+ LL + K GK ++ + QLL M
Sbjct: 327 TYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSM 386
Query: 442 VNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHM 501
+ K + ++ +Y VI GLC+A K LL ++M+ ++ P T I+D + + +
Sbjct: 387 IQKGCVP-NVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYR 445
Query: 502 YDAAEKI 508
D A ++
Sbjct: 446 VDIAYEL 452
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 158/297 (53%), Gaps = 3/297 (1%)
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQ 257
GL+ + +L LC G+ A F E+ PP++ T+N I+G K +R+D+A
Sbjct: 5 GLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAI 64
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
++EM +G P V SY+T++ +C+ LL++M +GCPP+VV+YTTV++ L
Sbjct: 65 RLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGL 124
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
K +EA R+ +KM G +P+ + L+ R + AV + + +M E G P+
Sbjct: 125 CKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVR-KMTERGYRPN 183
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
T+N ++ + A + +EM + C P+V T+ ++ S K+GK D+ +L
Sbjct: 184 AITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDA-CRL 242
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
++ MV+K S ++ TY+ ++HGLC+A K + A L + M +P T I+D
Sbjct: 243 VEAMVSK-GCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIID 298
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 125/450 (27%), Positives = 208/450 (46%), Gaps = 63/450 (14%)
Query: 81 DEVFQSLKQDHVCNAIQ--------PSHYLVNKLIHRF----KDDWKSALGIFRWAGSCP 128
D + +S K D C ++ P+ + L+H K D +AL + R S
Sbjct: 228 DSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATAL-LQRMTRS-- 284
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKG----HIVTLNTIAKVMRRFSGAGQW 184
G + Y ++D K+ ++D+ LLEEM G ++VT + + F G+
Sbjct: 285 GCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVL---LDAFCKCGKA 341
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNI 242
EDA+ + + G N T N LLD CK+ +VE A + + K C+P N ++N
Sbjct: 342 EDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVP-NVVSYNT 400
Query: 243 FIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
I G CK +V E +++M + C P +++++TII + C+ Y YEL + +Q G
Sbjct: 401 VIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESG 460
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKM-KIVGSKPDSRFFNCLIYTLGRASRVQEA 361
C PN+VTY +++ L KS F++A + +M + G PD +N +I L ++ RV A
Sbjct: 461 CTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRA 520
Query: 362 VYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLL 421
++ ++M +G+APD T++ +I+ ++A +VLE M K P T+ L+
Sbjct: 521 YKLF-LQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLK-NGFDPGAITYGTLI 578
Query: 422 KSCFKTGKTDECL----------------------------------SQLLDDMVNKHHL 447
KTG D+ L +LL+ M+ + L
Sbjct: 579 DGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETML-RAGL 637
Query: 448 SLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
D TY ++ G C A++ E A LF+ M
Sbjct: 638 VPDTVTYNTLLKGFCDASRTEDAVDLFEVM 667
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 114/416 (27%), Positives = 192/416 (46%), Gaps = 53/416 (12%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKG----HIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++ L K ++D+ ALL+ M++ +IVT NTI + G+ ++A +
Sbjct: 258 YSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKL---GRIDEAYHLLE 314
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARS-VFLELKSCIPPNAHTFNIFIHGWCKIN 251
E+ G + N T +LLD CK GK E A V + ++ PN T+N + +CK +
Sbjct: 315 EMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKD 374
Query: 252 RVDEAQWTIQEMKGHGCHPCVISY-----------------------------------S 276
V+ A + M GC P V+SY +
Sbjct: 375 EVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFN 434
Query: 277 TIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM-KI 335
TII + C+ Y YEL + +Q GC PN+VTY +++ L KS F++A + +M +
Sbjct: 435 TIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRK 494
Query: 336 VGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHE 395
G PD +N +I L ++ RV A ++ ++M +G+APD T++ +I+ +
Sbjct: 495 QGCSPDIITYNTVIDGLCKSKRVDRAYKLF-LQMLSDGLAPDDVTYSIVISSLCKWRFMD 553
Query: 396 KAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYT 455
+A +VLE M K P T+ L+ KTG D+ L ++L +++K D+ T++
Sbjct: 554 EANNVLELMLK-NGFDPGAITYGTLIDGFCKTGNLDKAL-EILQLLLSKGSYP-DVVTFS 610
Query: 456 LVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAV 511
+ I L + + A L + M+ + P T +L K DA+ +AV
Sbjct: 611 IFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLL-----KGFCDASRTEDAV 661
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 164/353 (46%), Gaps = 40/353 (11%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
GY + Y ++D+ K ++++ LL M KG + + + V+ A + +
Sbjct: 355 GYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEG 414
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHG 246
V +++ + + T N ++D +CK +V++A +F L +S PN T+N +HG
Sbjct: 415 VLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHG 474
Query: 247 WCKINRVDEAQWTIQEM-KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
CK R D+A++ ++EM + GC P +I+Y+T+I C+ + Y+L +M + G P
Sbjct: 475 LCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAP 534
Query: 306 NVVTYTTVMSYLAK-----------------------------------SGDFEEAIRIT 330
+ VTY+ V+S L K +G+ ++A+ I
Sbjct: 535 DDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEIL 594
Query: 331 EKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSH 390
+ + GS PD F+ I L + R+++A + + M G+ PDT T+NT++ F
Sbjct: 595 QLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLET-MLRAGLVPDTVTYNTLLKGFCD 653
Query: 391 HGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVN 443
E A + E M + C+P+ T+ L+ + L+++ MV+
Sbjct: 654 ASRTEDAVDLFEVMRQC-GCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVD 705
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 129/521 (24%), Positives = 235/521 (45%), Gaps = 46/521 (8%)
Query: 33 SHIVSSSPIESYC-----SDGARLDHHQVLCVDSPRLPDIDVIISKVHVGSSEDEVFQSL 87
S + +S ++ YC DG +L V C + P + +++++ + D+ +
Sbjct: 263 SRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELF 322
Query: 88 K--QDHVCNAIQPSHYLVNKLIHRFKDD---------WKSALGIFRWAGSCPGYEHSSEI 136
K + C +P+ +I D + AL + + G S I
Sbjct: 323 KLLSSYGC---KPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVISYTTVIKGLADSKRI 379
Query: 137 ---------------------YEMMVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAKV 174
Y ++D L K +++ E+MS V T T V
Sbjct: 380 DEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVV 439
Query: 175 MRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIP 234
+ A DA + F+++ G +T T L+D K K++ AR + + + P
Sbjct: 440 IDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGP 499
Query: 235 -PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
P A T+ +HG+CK++ ++EA+ I +M+ GC P + +++++ Y + + Y+
Sbjct: 500 EPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQ 559
Query: 294 LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLG 353
+L EM A+GC P+V+ YT+++ L +G EA + + M G PD+ + +I
Sbjct: 560 VLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFS 619
Query: 354 RASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPN 413
+ V+ A + ++ M ++GV PD +N+++ + ++AF V + M KPN
Sbjct: 620 KIGNVEAAGEILEL-MAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVA-SGIKPN 677
Query: 414 VQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLL 473
TF+ L+ FK GKTD S L +M+ K + + +YT++I GL +A + A+
Sbjct: 678 AVTFNVLMHGLFKDGKTDRAFS-LFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQ 736
Query: 474 FKEMIGHDITPRYQT-CRLILDEVKQKHMYDAAEKIEAVMK 513
F+EMI I P T LI K + +A + +E ++K
Sbjct: 737 FQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVK 777
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 166/362 (45%), Gaps = 44/362 (12%)
Query: 184 WEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNI 242
E+A+ E+ T GL + N++L+ LCK K++ A +FLE+ S P ++N
Sbjct: 1 MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60
Query: 243 FIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
I G I+++DEA M +GC P VI+++T+I +C+ +V +L +
Sbjct: 61 VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQ-PQVGHMLLNQALKR 119
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
P+V YT+V+ K+GD + +I E+M G PD+ + LI L + RV EA
Sbjct: 120 FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAY 179
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM------------------ 404
+++ M ++G D TF T+I S+HG ++A + EM
Sbjct: 180 ELFE-RMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFA 238
Query: 405 ----NKLEHCKPNVQT------------FHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
K++ QT ++ L+ K G+ D+ L LL MV +
Sbjct: 239 LCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLL-QMVECDNFP 297
Query: 449 LDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
DI TY +++ G RAN+ + A LFK + + P T I+ + +YDA
Sbjct: 298 -DIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTII-----QGLYDAQRME 351
Query: 509 EA 510
EA
Sbjct: 352 EA 353
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 162/341 (47%), Gaps = 5/341 (1%)
Query: 139 MMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTF 197
++++ L K R++D+ L EM S G T+ + V+ + + ++A + F+ +
Sbjct: 25 IVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDN 84
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQ 257
G E + L+ CK G+ ++ + + P+ + IHG+CK +D
Sbjct: 85 GCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGF 144
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
++EM GC P +Y +I C+ + YEL + M+ GC + VT+ T++ L
Sbjct: 145 KILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEAL 204
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
+ G +EA + +M G +P + LI+ L +A +V EA +YQ + + VA
Sbjct: 205 SNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKK-VATS 263
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
+N+++ + G + +L +M + ++ P++QT++ L+ + + D+ L
Sbjct: 264 RVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNF-PDIQTYNILVAGFSRANRLDDALE-- 320
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
L +++ + + TYT +I GL A + E A F E +
Sbjct: 321 LFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEAL 361
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 151/359 (42%), Gaps = 19/359 (5%)
Query: 97 QPSHYLVNKLIHRF-----KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMD 151
+P+ ++H F ++ K + R G PG + + L K R +
Sbjct: 500 EPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYY---LSKGRAEE 556
Query: 152 QMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLD 211
+ L E ++G + ++ G+ +A FD + G + T ++
Sbjct: 557 AYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQ 616
Query: 212 TLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHP 270
K G VE A + L KS + P+ +N + G+ K+ RVD+A M G P
Sbjct: 617 NFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKP 676
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEM-QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI 329
++++ ++ + + + L EM + PP +V+YT ++ L K+G EA
Sbjct: 677 NAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQ 736
Query: 330 TEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFS 389
++M G P+ + LIY+L +A R+ EA + + +M + GV PD ++ +IT
Sbjct: 737 FQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVE-DMVKLGVNPDVQAYSALITGLI 795
Query: 390 HHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
+ A+ V +EM K C PN T+ L + G+ LD K H S
Sbjct: 796 DSSMVDTAWDVFQEMMK-RGCAPNEVTYKVLRRGFRAAGRA-------LDLEAVKQHFS 846
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 91/191 (47%), Gaps = 5/191 (2%)
Query: 324 EEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNT 383
EEA+ ++M G PD N ++ L +A ++ +A+ ++ +EMP G P ++NT
Sbjct: 2 EEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELF-LEMPSMGCEPTIVSYNT 60
Query: 384 MITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVN 443
+I+ + ++A+ M C+P+V F L+ K G+ + LL+ +
Sbjct: 61 VISGLASIDKMDEAYKFFNSMID-NGCEPDVIAFTTLIHGFCKAGQP-QVGHMLLNQALK 118
Query: 444 KHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYD 503
+ D+ YT VIHG C+A + + + +EM+ P +++D + + D
Sbjct: 119 RFRP--DVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVD 176
Query: 504 AAEKIEAVMKK 514
A ++ M+K
Sbjct: 177 EAYELFERMRK 187
>gi|296081511|emb|CBI20034.3| unnamed protein product [Vitis vinifera]
Length = 596
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 178/335 (53%), Gaps = 3/335 (0%)
Query: 93 CNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQ 152
CN + SH LV ++ RFK K A F WAG G+ H+S Y M+ +LG+ RQ +
Sbjct: 184 CN-VDLSHALVVGVLERFKHARKPAFRFFCWAGQKAGFTHNSRTYNAMMSVLGRTRQFES 242
Query: 153 MRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDT 212
M +L EM + ++T+ T + ++ F+ A + + AV F+ + + + +T+N LLD
Sbjct: 243 MMGMLGEMGEKGLLTMETFSIAIKAFAAAKERKKAVGVFELMKRYNFDAGVDTINCLLDN 302
Query: 213 LCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCV 272
L + + A+++F +L+ PN T+ + ++GWC+I + EA T EM G P +
Sbjct: 303 LGRAKLGKEAQALFEKLEDRFTPNLRTYTVLLNGWCRIKNLVEAGRTWNEMIDKGFKPDI 362
Query: 273 ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEK 332
I++ T+++ + S +L + M+A+G PNV TYT ++ L K +EA+ ++
Sbjct: 363 IAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPSPNVRTYTILIRDLCKQMKMQEAVEYFDE 422
Query: 333 MKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
M G +PD+ + CLI G ++ + VY EM E G D T+N +I + ++
Sbjct: 423 MVDSGCQPDAAVYTCLITGFGNQKKM-DKVYALLKEMKEKGCPADGRTYNALIKLMTNRQ 481
Query: 393 HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKT 427
+ A + ++M + + + T++ ++KS F T
Sbjct: 482 MPDDAVRIYKKMIQ-NGIQSTLHTYNMMMKSYFYT 515
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 111/244 (45%), Gaps = 13/244 (5%)
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
+Y+ ++ R F + +L EM +G + T++ + A + + ++A+ + E M
Sbjct: 226 TYNAMMSVLGRTRQFESMMGMLGEMGEKGLL-TMETFSIAIKAFAAAKERKKAVGVFELM 284
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
K NCL+ LGRA +EA ++ E E+ P+ T+ ++ + +
Sbjct: 285 KRYNFDAGVDTINCLLDNLGRAKLGKEAQALF--EKLEDRFTPNLRTYTVLLNGWCRIKN 342
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
+A EM + KP++ H +L+ K K + + L +++ S ++ T
Sbjct: 343 LVEAGRTWNEMID-KGFKPDIIAHHTMLEGLLKCKKKSDAIK--LFEVMKAKGPSPNVRT 399
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ--TCRLILDEVKQKHMYDAAEKIEAV 511
YT++I LC+ K + A F EM+ P TC LI QK M +K+ A+
Sbjct: 400 YTILIRDLCKQMKMQEAVEYFDEMVDSGCQPDAAVYTC-LITGFGNQKKM----DKVYAL 454
Query: 512 MKKL 515
+K++
Sbjct: 455 LKEM 458
>gi|449457341|ref|XP_004146407.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Cucumis sativus]
gi|449523938|ref|XP_004168980.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Cucumis sativus]
Length = 506
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 118/443 (26%), Positives = 219/443 (49%), Gaps = 19/443 (4%)
Query: 84 FQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDI 143
F S++ ++I S +L+++ + R K AL F +A S P S+ Y +++DI
Sbjct: 52 FHSMESSLQLHSISFSSHLLDQTLLRLTHHSKIALSFFDYANSLPSNPISTTSYNILLDI 111
Query: 144 LGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL-GTFGLEK 201
L KVRQ D L+ +M KG +T ++RR +G+ A+R FD++ G G +
Sbjct: 112 LAKVRQFDAAWHLILQMDHKG----TDTFLLLIRRLISSGRTRQAIRAFDDIEGLTGNKV 167
Query: 202 NTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQ 261
+ LLD LCK G V++A VF + K + + I I+GWCKI R + A+ ++
Sbjct: 168 GIDDFCYLLDVLCKYGYVKVAVEVFNKRKEEFGVDVKIYTILIYGWCKIGRFEMAERFLK 227
Query: 262 EMKGHGCHPCVISYSTIIQSYCRQYN------FSKVY----ELLDEMQAQGCPPNVVTYT 311
+M G P V++Y+ ++ CR+ + F K ++ DEM+ +G P+V +++
Sbjct: 228 DMVERGIEPNVVTYNVLLNGVCRRASLHPEGRFEKTIRHAEKVFDEMRKRGIEPDVTSFS 287
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
V+ +++ E ++ ++MK +G P + +I L R+++ + + EM
Sbjct: 288 IVLHVYSRAHKPELSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLEDGENLIE-EMVR 346
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
+G++P +T+N + A + ++M + C P++ T++ LL + F
Sbjct: 347 SGISPSPTTYNCFFKEYRGRKDGAGALRLYKKMREDCLCAPSLHTYNILL-ALFLNLDKK 405
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRL 491
E L +L +DM + + D+ +YT +IHGLC + A F EMI P+ T +
Sbjct: 406 ETLKELWNDM-KESGVGPDLDSYTTIIHGLCEKQRWSEACQFFVEMIERGFLPQKVTFEM 464
Query: 492 ILDEVKQKHMYDAAEKIEAVMKK 514
+ + Q M +++ +++
Sbjct: 465 LYRGLIQSDMLRTWRRLKKKLEE 487
>gi|356540361|ref|XP_003538658.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 123/459 (26%), Positives = 225/459 (49%), Gaps = 9/459 (1%)
Query: 59 VDSPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSAL 118
V P LPD+ IS++ S L+ + Q S LV++++ R + SA
Sbjct: 38 VSGPLLPDLVNEISRLL--SDHRYPHHDLELSLNPFSAQISTNLVDQVLKRCNNLGFSAH 95
Query: 119 GIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNT--IAKVMR 176
F WA S PG++HS + ++V+ILG +Q + L EM +N+ + R
Sbjct: 96 RFFLWAKSIPGFQHSVMSFHILVEILGSCKQFAILWDFLIEMRGSCHYEINSEIFWLIFR 155
Query: 177 RFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPN 236
+S A + A+R+F+ + FG++ + LL LCK V+ A+ F + K+
Sbjct: 156 AYSQANLPDGAIRSFNRMDEFGIKPTINDFDKLLFILCKTKHVKQAQQFFDQAKNRFLLT 215
Query: 237 AHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLD 296
A T++I I GW I ++A Q M GC +++Y+ ++Q+ C+ + +
Sbjct: 216 AKTYSILISGWGDIGDSEKAHELFQAMLEQGCPVDLLAYNNLLQALCKGGCVDEAKTIFH 275
Query: 297 EMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRAS 356
+M ++ P+ TY+ + + D + A+R+ +KM+ P+ +NC+I L +
Sbjct: 276 DMLSKRVEPDAFTYSIFIHSYCDADDVQSALRVLDKMRRYNILPNVFTYNCIIKRLCKNE 335
Query: 357 RVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQT 416
V+EA Y+ EM GV PDT ++N + H +A ++ M K ++C P+ T
Sbjct: 336 HVEEA-YLLLDEMISRGVRPDTWSYNAIQAYHCDHCEVNRAIRLMFRMEK-DNCLPDRHT 393
Query: 417 FHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC-RANKCEWAYLLFK 475
++ +LK + G+ D+ ++++ +M +K ++TY+++IHG C + K E A F+
Sbjct: 394 YNMVLKLLIRIGRFDK-VTKVWGNMGDKKFYP-SVSTYSVMIHGFCKKKGKLEEACKYFE 451
Query: 476 EMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
MI I P T ++ +++ D E + A M++
Sbjct: 452 MMIDEGIPPYVTTVEMLRNQLLGLGFLDHIEILAAKMRQ 490
>gi|449500717|ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02060, chloroplastic-like [Cucumis sativus]
Length = 720
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 123/424 (29%), Positives = 212/424 (50%), Gaps = 27/424 (6%)
Query: 110 FKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALL---EEMSKGHIV 166
F D AL F WA GY H+ + Y M++ILG+ R ++ R L E+ S+G IV
Sbjct: 88 FLRDTSKALQFFNWAQEM-GYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEKRSRG-IV 145
Query: 167 TLNT--IAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARS 224
L +MR F+ AG ++++++ F + + G+ + T N LL L K G+ +A+
Sbjct: 146 KLEARFFNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKK 205
Query: 225 VFLELKSC--IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSY 282
V+ E+ S + P+ TFNI I G+C VD+ ++ GC P V++Y+T++
Sbjct: 206 VYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGL 265
Query: 283 CRQYNFSKVYELLDEMQAQGCP--PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
CR + Y ++ M + PNVVTYTT++ + E+A+ + E+M G K
Sbjct: 266 CRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKA 325
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
++ +N LI L A + ++ + + + +PDT TFNT++ H G+ + A V
Sbjct: 326 NNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKV 385
Query: 401 LEEMNKLEHCKPNVQTFHPLLKSCFKTG---KTDECLSQLLDDMVNKHHLSLD-----IT 452
E M++L+ +P+ T+ L++S + G K ++ L +LL+ K LS D +
Sbjct: 386 FERMSELK-IQPDSATYSALVRSLCQGGHYEKAEDLLDKLLE---RKILLSGDGCKPLVA 441
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMI--GHDITPRYQTCRLILDEVKQKHMYDAAEKIEA 510
Y + LC K + A F++++ G P Y+T LI+ K+ E +
Sbjct: 442 AYNPIFKYLCETGKTKKAEKAFRQLMRRGTQDPPSYKT--LIMGHCKEGTFESGYELLVL 499
Query: 511 VMKK 514
+++K
Sbjct: 500 MLRK 503
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 89/430 (20%), Positives = 182/430 (42%), Gaps = 51/430 (11%)
Query: 111 KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNT 170
K + + AL +F + G + ++ Y ++ L + R+ ++++ +LE + + +T
Sbjct: 305 KREIEKALAVFEEMVN-QGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDT 363
Query: 171 --IAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVE-------- 220
+M AG +DA++ F+ + ++ ++ T + L+ +LC+ G E
Sbjct: 364 CTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDK 423
Query: 221 -LARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCH--PCVISYST 277
L R + L C P A +N C+ + +A+ +++ G P SY T
Sbjct: 424 LLERKILLSGDGCKPLVA-AYNPIFKYLCETGKTKKAEKAFRQLMRRGTQDPP---SYKT 479
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+I +C++ F YELL M + P+ TY ++++ L A++ EKM
Sbjct: 480 LIMGHCKEGTFESGYELLVLMLRKDFXPDFETYESLINGLLHMDKPLLALQSLEKMLRSS 539
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKA 397
+P+S F+ ++ L R E+ + Q+ + +N + + S + + G ++KA
Sbjct: 540 HRPNSSTFHSILAKLLEQGRASESASLIQLMLDKN-IRQNLSFSTGCVRLLFGAGMNDKA 598
Query: 398 FHV------------LEEMNK-LEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK 444
F + +EE+ + L HC+ +Q LL S +
Sbjct: 599 FQLVHLLYGKGYSVKMEELIRYLCHCRKVIQGSKLLLFSL-------------------E 639
Query: 445 HHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDA 504
H +D+ VI LC NK A+ L+ +++ + + + +K +
Sbjct: 640 SHQFVDMDLCNTVIFQLCEINKLSEAFSLYYKLVEMGVHQQLSCQNQLKVSLKAGGKLEE 699
Query: 505 AEKIEAVMKK 514
AE ++ M++
Sbjct: 700 AESVQKRMER 709
>gi|449449910|ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Cucumis sativus]
Length = 757
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 123/424 (29%), Positives = 212/424 (50%), Gaps = 27/424 (6%)
Query: 110 FKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALL---EEMSKGHIV 166
F D AL F WA GY H+ + Y M++ILG+ R ++ R L E+ S+G IV
Sbjct: 88 FLRDTSKALQFFNWAQEM-GYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEKRSRG-IV 145
Query: 167 TLNT--IAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARS 224
L +MR F+ AG ++++++ F + + G+ + T N LL L K G+ +A+
Sbjct: 146 KLEARFFNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKK 205
Query: 225 VFLELKSC--IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSY 282
V+ E+ S + P+ TFNI I G+C VD+ ++ GC P V++Y+T++
Sbjct: 206 VYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGL 265
Query: 283 CRQYNFSKVYELLDEMQAQGCP--PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
CR + Y ++ M + PNVVTYTT++ + E+A+ + E+M G K
Sbjct: 266 CRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKA 325
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
++ +N LI L A + ++ + + + +PDT TFNT++ H G+ + A V
Sbjct: 326 NNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKV 385
Query: 401 LEEMNKLEHCKPNVQTFHPLLKSCFKTG---KTDECLSQLLDDMVNKHHLSLD-----IT 452
E M++L+ +P+ T+ L++S + G K ++ L +LL+ K LS D +
Sbjct: 386 FERMSELK-IQPDSATYSALVRSLCQGGHYEKAEDLLDKLLE---RKILLSGDGCKPLVA 441
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMI--GHDITPRYQTCRLILDEVKQKHMYDAAEKIEA 510
Y + LC K + A F++++ G P Y+T LI+ K+ E +
Sbjct: 442 AYNPIFKYLCETGKTKKAEKAFRQLMRRGTQDPPSYKT--LIMGHCKEGTFESGYELLVL 499
Query: 511 VMKK 514
+++K
Sbjct: 500 MLRK 503
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 84/392 (21%), Positives = 168/392 (42%), Gaps = 47/392 (11%)
Query: 111 KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNT 170
K + + AL +F + G + ++ Y ++ L + R+ ++++ +LE + + +T
Sbjct: 305 KREIEKALAVFEEMVN-QGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDT 363
Query: 171 --IAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVE-------- 220
+M AG +DA++ F+ + ++ ++ T + L+ +LC+ G E
Sbjct: 364 CTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDK 423
Query: 221 -LARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
L R + L C P A +N C+ + +A+ +++ G SY T+I
Sbjct: 424 LLERKILLSGDGCKPLVA-AYNPIFKYLCETGKTKKAEKAFRQLMRRGTQD-PPSYKTLI 481
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
+C++ F YELL M + P+ TY ++++ L A++ EKM +
Sbjct: 482 MGHCKEGTFESGYELLVLMLRKDFLPDFETYESLINGLLHMDKPLLALQSLEKMLRSSHR 541
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
P+S F+ ++ L R E+ + Q+ + +N + + S + + G ++KAF
Sbjct: 542 PNSSTFHSILAKLLEQGRTSESASLIQLMLDKN-IRQNLSFSTGCVRLLFGAGMNDKAFQ 600
Query: 400 V------------LEEMNK-LEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHH 446
+ +EE+ + L HC+ +Q LL S + H
Sbjct: 601 LVHLLYGKGYSVKMEELIRYLCHCRKVIQGSKLLLFSL-------------------ESH 641
Query: 447 LSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
+D+ VI LC NK A+ L+ +++
Sbjct: 642 QFVDMDLCNTVIFQLCEINKLSEAFSLYYKLV 673
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 116/408 (28%), Positives = 205/408 (50%), Gaps = 9/408 (2%)
Query: 74 VHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWK--SALGIFRWAGSCPGYE 131
+ V S E E + + + V Q + N LI F + SA+ +FR G E
Sbjct: 74 ILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREM-KIKGSE 132
Query: 132 HSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRT 190
Y +V+ LGK ++ + R+ + M +G + T +M F GQ + A+
Sbjct: 133 PDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGL 192
Query: 191 FDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCK 249
F E+ G + + T N+LLD LC G+V AR +F ++ P+++T++ ++G K
Sbjct: 193 FAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGK 252
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
RV+EA +EM G +++Y++++ + + N +V++L+ EM +G P+ +
Sbjct: 253 SGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFS 312
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM 369
+ T+M L K+ + A + +M G KPD +N LI + R +A + + EM
Sbjct: 313 FNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLE-EM 371
Query: 370 PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
E G P+T T+N++I + G ++AF VLEEM + C+P+V T++ L+ K G+
Sbjct: 372 VEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEM-ETAGCRPDVVTYNRLMDMLGKRGE 430
Query: 430 TDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
++L M +K + D +Y + I GL ++ + A +LFK+M
Sbjct: 431 NQRA-ARLFQQMKDKG-VEPDTLSYAVRIDGLAFDDRLDEALVLFKDM 476
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 167/341 (48%), Gaps = 5/341 (1%)
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSC 232
++R F +GQ + A+ F E+ G E + T L++ L K G+V+ ARS F L+
Sbjct: 106 LIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERG 165
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
+ PN T+N+ + + K+ ++D A EMK G P V++Y+ ++ + C
Sbjct: 166 LTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAAR 225
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
+L +M GC P+ TY+T+++ L KSG EEA ++ +M G D +N L+ TL
Sbjct: 226 KLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATL 285
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
+A + + V+ EM G PD +FNT++ + A V M + CKP
Sbjct: 286 AKAGNM-DRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVE-SGCKP 343
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
++ +++ L+ S + G + Q+L++MV + + TY +IH L + + A+
Sbjct: 344 DLISYNILIDSYARFGDAAQA-RQMLEEMVEAGFIP-ETKTYNSLIHWLATDGQVDEAFA 401
Query: 473 LFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
+ +EM P T ++D + ++ A ++ MK
Sbjct: 402 VLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMK 442
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 159/323 (49%), Gaps = 5/323 (1%)
Query: 167 TLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF 226
T++ K++ +G++E A + +L G + + N+L+ + G+++ A +F
Sbjct: 64 TVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMF 123
Query: 227 LELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQ 285
E+K P+ +T+ ++ K RV EA+ M G P + +Y+ ++ ++ +
Sbjct: 124 REMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKV 183
Query: 286 YNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFF 345
L EM+ +G P+VVTY ++ L +G A ++ KM G PDS +
Sbjct: 184 GQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTY 243
Query: 346 NCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMN 405
+ L+ LG++ RV+EA V++ EM + GVA D +N+++ + G+ ++ + +++EM+
Sbjct: 244 STLVNGLGKSGRVEEAHKVFR-EMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMS 302
Query: 406 KLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRAN 465
+ + P+ +F+ ++ + K K D ++ MV + D+ +Y ++I R
Sbjct: 303 R-KGFHPDAFSFNTIMDALGKANKPDAA-REVFARMV-ESGCKPDLISYNILIDSYARFG 359
Query: 466 KCEWAYLLFKEMIGHDITPRYQT 488
A + +EM+ P +T
Sbjct: 360 DAAQARQMLEEMVEAGFIPETKT 382
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 119/250 (47%), Gaps = 4/250 (1%)
Query: 234 PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
P +T I + + N+ +A + + C P V +++ +I F +
Sbjct: 27 PLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAEL 86
Query: 294 LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLG 353
+ ++ +GC + Y ++ Y +SG + A+ + +MKI GS+PD + L+ LG
Sbjct: 87 VYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALG 146
Query: 354 RASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPN 413
+A RVQEA + M E G+ P+ T+N ++ F G + A + EM K +P+
Sbjct: 147 KAGRVQEARSFFDA-MLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEM-KRRGFQPS 204
Query: 414 VQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLL 473
V T++ LL + G+ +L M S D TY+ +++GL ++ + E A+ +
Sbjct: 205 VVTYNILLDALCSAGRVGAA-RKLFHKMTG-DGCSPDSYTYSTLVNGLGKSGRVEEAHKV 262
Query: 474 FKEMIGHDIT 483
F+EM+ +
Sbjct: 263 FREMVDRGVA 272
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 72/150 (48%), Gaps = 2/150 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +++D + Q R +LEEM G I T ++ + GQ ++A +E+
Sbjct: 348 YNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEME 407
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVD 254
T G + T N L+D L K G+ + A +F ++K + P+ ++ + I G +R+D
Sbjct: 408 TAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLD 467
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCR 284
EA ++MK GC Y +I++ R
Sbjct: 468 EALVLFKDMKAVGCPVDKAMYRILIRAAHR 497
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 85/224 (37%), Gaps = 45/224 (20%)
Query: 294 LLDEMQAQGCP--PN-VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIY 350
LL EM A+G P PN +V T KSGD A + + + P F LI
Sbjct: 17 LLKEMVAEGRPLRPNTLVKLITAYGRGNKSGD---AFDLFNQAESFACSPTVHAFTKLID 73
Query: 351 TLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHC 410
L + + A VY+ ++ + G D +N +I F G + A + EM K++
Sbjct: 74 ILVNSGEFERAELVYK-KLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREM-KIKGS 131
Query: 411 KPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWA 470
+P D TY +++ L +A + + A
Sbjct: 132 EP-------------------------------------DEYTYGFLVNALGKAGRVQEA 154
Query: 471 YLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
F M+ +TP T L++D ++ D A + A MK+
Sbjct: 155 RSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKR 198
>gi|326487476|dbj|BAJ89722.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 805
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 130/489 (26%), Positives = 234/489 (47%), Gaps = 37/489 (7%)
Query: 33 SHIVSSSPIESYCSDGARLDHHQVLCVDSPRLPDIDVIISKVHVGSSEDEVFQSLKQDHV 92
+H + +P S+ S A VL + S LP + ++ S D++ ++ +
Sbjct: 67 NHHPTPTPSTSFLSPAA---QALVLDLSSTPLPALPSFLA-----SRRDDLLRAADLPSL 118
Query: 93 CNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQ 152
A++ S + W+ AL + RWA G +EM+V LG+ + D
Sbjct: 119 LKALELSGH------------WEWALALLRWA-RAEGAADGPAPFEMVVRALGREGRHDA 165
Query: 153 MRALLEEMS--KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLL 210
+ ALL+EM G + + V+ S G++E A+R FDEL G+ T N++L
Sbjct: 166 VCALLDEMPLPPGARLDVRAYTTVLHALSREGRYERALRLFDELRREGVAPTRVTYNVVL 225
Query: 211 DTLCKEGKVELARSVFL--ELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG 267
D + G+ R V L ++++ + P+ T + I + VDEA +++K G
Sbjct: 226 DVYGRMGR-SWPRVVALLADMRAAGVEPDGFTASTVIAAAGRDGLVDEAVAFFEDLKARG 284
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
PCV++Y+ ++Q + + N+++ +L EM+ GC P+ VTY + A++G ++EA
Sbjct: 285 HAPCVVTYNALLQVFGKAGNYTEALRVLREMEDAGCKPDAVTYNELAGSYARAGFYQEAA 344
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITM 387
+ + M G P++ +N ++ G A +V EA+ ++ M +NG P T+T+N ++ M
Sbjct: 345 KCIDTMIGKGLLPNTFTYNTIMTAYGNAGKVDEALALFD-RMKKNGFIPYTNTYNLVLGM 403
Query: 388 FSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVN-KHH 446
+L EM++ C PN T++ LL C K G + ++++L+ M + K
Sbjct: 404 LGKKSRFAAMLEMLGEMSR-SGCTPNRVTWNTLLAVCGKRG-MESYVTRVLEGMKSCKVE 461
Query: 447 LSLDITTYTLVIHGLC--RANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDA 504
L D + +G C RAN A+ ++ EM P T +L+ + ++ + A
Sbjct: 462 LCRDTYNTLICAYGRCGSRAN----AFKMYDEMTAAGFAPCLTTYNALLNVLSRQGDWTA 517
Query: 505 AEKIEAVMK 513
A I + MK
Sbjct: 518 ARSIVSKMK 526
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 103/457 (22%), Positives = 187/457 (40%), Gaps = 85/457 (18%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++ + GK + +L EM K VT N +A R AG +++A + D
Sbjct: 292 YNALLQVFGKAGNYTEALRVLREMEDAGCKPDAVTYNELAGSYAR---AGFYQEAAKCID 348
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKIN 251
+ GL NT T N ++ GKV+ A ++F +K + P +T+N+ + K +
Sbjct: 349 TMIGKGLLPNTFTYNTIMTAYGNAGKVDEALALFDRMKKNGFIPYTNTYNLVLGMLGKKS 408
Query: 252 RVDEAQWTIQEMKGHGCHP-----------------------------------CVISYS 276
R + EM GC P C +Y+
Sbjct: 409 RFAAMLEMLGEMSRSGCTPNRVTWNTLLAVCGKRGMESYVTRVLEGMKSCKVELCRDTYN 468
Query: 277 TIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIV 336
T+I +Y R + + +++ DEM A G P + TY +++ L++ GD+ A I KMK
Sbjct: 469 TLICAYGRCGSRANAFKMYDEMTAAGFAPCLTTYNALLNVLSRQGDWTAARSIVSKMKSE 528
Query: 337 GSKPDSRFFNCLI--YTLGRASRVQEAVY--VYQV------------------------- 367
G KP+ ++ L+ + G + EA+ VYQ
Sbjct: 529 GFKPNDMSYSLLLQCHAKGGNAAGIEAIEKEVYQGNIFPSWVILRTLVIANFKCRRLEGI 588
Query: 368 -----EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLK 422
E+ G PD N+M+++++ +G + KA + E + +L P++ T++ L+
Sbjct: 589 ERAFQEVKARGHKPDLVILNSMLSIYAKNGLYSKAMEMFESIEQL-GLSPDLITYNSLMD 647
Query: 423 SCFKTGK---TDECLSQL----LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFK 475
K+ + ++ L++L + L D+ +Y VI+G C+ + A +
Sbjct: 648 MYAKSNEPWEAEKILNRLRSSQSQQQQQQQQLKPDVVSYNTVINGFCKEGLIKEAQRVLS 707
Query: 476 EMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
EMI + P T ++ + M+ A ++ M
Sbjct: 708 EMIADGVAPCVITYHTLVGGYASREMFAEAREVVGYM 744
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 88/415 (21%), Positives = 168/415 (40%), Gaps = 86/415 (20%)
Query: 92 VCNAIQPSHYLVNKLIHRFKDDWK--SALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQ 149
+ + P+ + N ++ + + K AL +F G+ + Y +++ +LGK +
Sbjct: 351 IGKGLLPNTFTYNTIMTAYGNAGKVDEALALFDRMKKN-GFIPYTNTYNLVLGMLGKKSR 409
Query: 150 MDQMRALLEEMSKG----HIVTLNTI----------AKVMRRFSGA-------------- 181
M +L EMS+ + VT NT+ + V R G
Sbjct: 410 FAAMLEMLGEMSRSGCTPNRVTWNTLLAVCGKRGMESYVTRVLEGMKSCKVELCRDTYNT 469
Query: 182 --------GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-C 232
G +A + +DE+ G T N LL+ L ++G ARS+ ++KS
Sbjct: 470 LICAYGRCGSRANAFKMYDEMTAAGFAPCLTTYNALLNVLSRQGDWTAARSIVSKMKSEG 529
Query: 233 IPPNAHTFNIFIH-------------------------GWC----------KINRVDEAQ 257
PN ++++ + W K R++ +
Sbjct: 530 FKPNDMSYSLLLQCHAKGGNAAGIEAIEKEVYQGNIFPSWVILRTLVIANFKCRRLEGIE 589
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
QE+K G P ++ ++++ Y + +SK E+ + ++ G P+++TY ++M
Sbjct: 590 RAFQEVKARGHKPDLVILNSMLSIYAKNGLYSKAMEMFESIEQLGLSPDLITYNSLMDMY 649
Query: 318 AKSGDFEEAIRITEKMKIVGS---------KPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
AKS + EA +I +++ S KPD +N +I + ++EA V E
Sbjct: 650 AKSNEPWEAEKILNRLRSSQSQQQQQQQQLKPDVVSYNTVINGFCKEGLIKEAQRVLS-E 708
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
M +GVAP T++T++ ++ +A V+ M + KP T+ ++ S
Sbjct: 709 MIADGVAPCVITYHTLVGGYASREMFAEAREVVGYMIQ-RKLKPMELTYRRVVDS 762
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 92/192 (47%), Gaps = 11/192 (5%)
Query: 146 KVRQMDQM-RALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTE 204
K R+++ + RA E ++GH L + ++ ++ G + A+ F+ + GL +
Sbjct: 581 KCRRLEGIERAFQEVKARGHKPDLVILNSMLSIYAKNGLYSKAMEMFESIEQLGLSPDLI 640
Query: 205 TMNLLLDTLCKEGKVELARSVFLELKSC----------IPPNAHTFNIFIHGWCKINRVD 254
T N L+D K + A + L+S + P+ ++N I+G+CK +
Sbjct: 641 TYNSLMDMYAKSNEPWEAEKILNRLRSSQSQQQQQQQQLKPDVVSYNTVINGFCKEGLIK 700
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EAQ + EM G PCVI+Y T++ Y + F++ E++ M + P +TY V+
Sbjct: 701 EAQRVLSEMIADGVAPCVITYHTLVGGYASREMFAEAREVVGYMIQRKLKPMELTYRRVV 760
Query: 315 SYLAKSGDFEEA 326
++ +E+A
Sbjct: 761 DSYCRAKRYEDA 772
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 115/265 (43%), Gaps = 18/265 (6%)
Query: 111 KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI----V 166
+ DW +A I S G++ + Y +++ K + A+ +E+ +G+I V
Sbjct: 512 QGDWTAARSIVSKMKS-EGFKPNDMSYSLLLQCHAKGGNAAGIEAIEKEVYQGNIFPSWV 570
Query: 167 TLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF 226
L T+ V+ F + E R F E+ G + + +N +L K G A +F
Sbjct: 571 ILRTL--VIANFK-CRRLEGIERAFQEVKARGHKPDLVILNSMLSIYAKNGLYSKAMEMF 627
Query: 227 LELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG---------CHPCVISYS 276
++ + P+ T+N + + K N EA+ + ++ P V+SY+
Sbjct: 628 ESIEQLGLSPDLITYNSLMDMYAKSNEPWEAEKILNRLRSSQSQQQQQQQQLKPDVVSYN 687
Query: 277 TIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIV 336
T+I +C++ + +L EM A G P V+TY T++ A F EA + M
Sbjct: 688 TVINGFCKEGLIKEAQRVLSEMIADGVAPCVITYHTLVGGYASREMFAEAREVVGYMIQR 747
Query: 337 GSKPDSRFFNCLIYTLGRASRVQEA 361
KP + ++ + RA R ++A
Sbjct: 748 KLKPMELTYRRVVDSYCRAKRYEDA 772
>gi|297842515|ref|XP_002889139.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334980|gb|EFH65398.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 482
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 112/421 (26%), Positives = 204/421 (48%), Gaps = 9/421 (2%)
Query: 64 LPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRW 123
+ D+ ISKV + S + + +L Q + ++ S +V +++RF++ A F+W
Sbjct: 33 VADVAKNISKVLMSSPQLVIDSALDQ----SGLRVSPEVVEDVLYRFRNAGLLAYRFFQW 88
Query: 124 AGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQ 183
+ YEHS Y MM++ K+RQ M L+ M K ++ + T VMR+++ A +
Sbjct: 89 SEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMMKKKMLNVETFCIVMRKYARAQK 148
Query: 184 WEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIF 243
++A+ F+ + + L N N LL LCK V A+ +F ++ P++ T++I
Sbjct: 149 VDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEIFENMRDRFTPDSKTYSIL 208
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
+ GW K + +A+ +EM G P +++YS ++ C+ + ++ M C
Sbjct: 209 LEGWGKEPNLPKAREVFREMVDAGSLPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSIC 268
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
P Y+ ++ EEA+ +M+ G K D FN LI + +R++ VY
Sbjct: 269 KPTTFIYSVLVHTYGTETRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKTNRMKN-VY 327
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
EM GV P++ + N ++ G ++AF V +M K+ C+P+ T+ ++K
Sbjct: 328 RVLKEMKSKGVTPNSKSCNIILRHLIDRGEKDEAFDVFRKMIKV--CEPDADTYTMMIK- 384
Query: 424 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
F K E ++ M K + + T++++I+GLC + A +L +EMI I
Sbjct: 385 MFCEKKEMETADKVWKYM-RKKGVFPSMHTFSVLINGLCEEPNTQKACVLLEEMIEMGIR 443
Query: 484 P 484
P
Sbjct: 444 P 444
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 116/239 (48%), Gaps = 10/239 (4%)
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
V ++ +++ Y R + + M+ PPN+V + ++S L KS + +A I E
Sbjct: 133 VETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEIFE 192
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHH 391
M+ + PDS+ ++ L+ G+ + +A V++ EM + G PD T++ M+ +
Sbjct: 193 NMRDRFT-PDSKTYSILLEGWGKEPNLPKAREVFR-EMVDAGSLPDIVTYSIMVDILCKA 250
Query: 392 GHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDI 451
G ++A ++ M+ CKP + L+ + + +E + L+ + + + D+
Sbjct: 251 GRVDEALGIVRSMDP-SICKPTTFIYSVLVHTYGTETRLEEAVDTFLE--MERSGMKADV 307
Query: 452 TTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEA 510
+ +I C+ N+ + Y + KEM +TP ++C +IL +H+ D EK EA
Sbjct: 308 AVFNSLIGAFCKTNRMKNVYRVLKEMKSKGVTPNSKSCNIIL-----RHLIDRGEKDEA 361
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 124/283 (43%), Gaps = 23/283 (8%)
Query: 62 PRLPDI-DVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGI 120
P LP +V V GS D V S+ D +C A + ALGI
Sbjct: 216 PNLPKAREVFREMVDAGSLPDIVTYSIMVDILCKAGRVDE----------------ALGI 259
Query: 121 FRWAGSCPGY-EHSSEIYEMMVDILG-KVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRF 178
R P + ++ IY ++V G + R + + LE G + ++ F
Sbjct: 260 VRSMD--PSICKPTTFIYSVLVHTYGTETRLEEAVDTFLEMERSGMKADVAVFNSLIGAF 317
Query: 179 SGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAH 238
+ ++ R E+ + G+ N+++ N++L L G+ + A VF ++ P+A
Sbjct: 318 CKTNRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIDRGEKDEAFDVFRKMIKVCEPDAD 377
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
T+ + I +C+ ++ A + M+ G P + ++S +I C + N K LL+EM
Sbjct: 378 TYTMMIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEEPNTQKACVLLEEM 437
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIR-ITEKMKIVGSKP 340
G P+ T+ + L K D E+ ++ + EKM ++ ++P
Sbjct: 438 IEMGIRPSGATFGRLRQLLLKE-DREDVLKFLNEKMNVLVNEP 479
>gi|357444525|ref|XP_003592540.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481588|gb|AES62791.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 507
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 200/391 (51%), Gaps = 5/391 (1%)
Query: 96 IQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRA 155
++ S LV ++++ + AL FRWA G+ H++EI+ +++ LGK+RQ +
Sbjct: 82 VEVSPELVVAVLNKLSNAGILALSFFRWAEKQQGFNHNTEIFHALIEALGKIRQFKMIWN 141
Query: 156 LLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK 215
L++EM + ++ +T + + RR+ A ++A++TF+ + +GL+ N L+D LCK
Sbjct: 142 LVDEMKQRKLLNGDTFSLIARRYVRAKVIKEALKTFERMEKYGLKPQISDFNKLIDVLCK 201
Query: 216 EG-KVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI 273
VE A+ +F +++ + PN ++ I I GW + + + +EMK G P V+
Sbjct: 202 SKFHVEKAQELFDKMRQWNLEPNLKSYTILIEGWSQQQNLLKVDEVCREMKDDGFQPDVV 261
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
+Y II +YC+ + + + +M ++ P+ Y T ++ L +EA EK
Sbjct: 262 TYGIIINAYCKAKKYDEAIGIYHDMLSKNVNPSPHIYCTFITGLGNGSRMDEAFEFFEKS 321
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
K G P++ +N ++ + R+ +A Y EM E G+ P+ T++ ++ G
Sbjct: 322 KASGFPPEAPTYNAVVSAYCWSMRIDDA-YRIVGEMKELGIGPNARTYDIILVHLIKGGR 380
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
++A+ V + M+ C+P+V T+ +++ + D + + ++M +K L I
Sbjct: 381 TKEAYSVFQRMSSETGCEPSVSTYAIMVRMFCNENQLDMAMV-VWNEMKDKGILP-GIHM 438
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
++ +I LC NK + A F++M+ I P
Sbjct: 439 FSTLIISLCHENKLDDACRYFQQMLDVGIRP 469
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/308 (20%), Positives = 131/308 (42%), Gaps = 22/308 (7%)
Query: 62 PRLPDIDVII-----SKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKS 116
P++ D + +I SK HV ++ E+F ++Q ++ ++ L+ + W
Sbjct: 187 PQISDFNKLIDVLCKSKFHVEKAQ-ELFDKMRQWNLEPNLKSYTILI--------EGWSQ 237
Query: 117 ALGIFRWAGSC-----PGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNT 170
+ + C G++ Y ++++ K ++ D+ + +M SK + +
Sbjct: 238 QQNLLKVDEVCREMKDDGFQPDVVTYGIIINAYCKAKKYDEAIGIYHDMLSKNVNPSPHI 297
Query: 171 IAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK 230
+ + ++A F++ G T N ++ C +++ A + E+K
Sbjct: 298 YCTFITGLGNGSRMDEAFEFFEKSKASGFPPEAPTYNAVVSAYCWSMRIDDAYRIVGEMK 357
Query: 231 SC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH-GCHPCVISYSTIIQSYCRQYNF 288
I PNA T++I + K R EA Q M GC P V +Y+ +++ +C +
Sbjct: 358 ELGIGPNARTYDIILVHLIKGGRTKEAYSVFQRMSSETGCEPSVSTYAIMVRMFCNENQL 417
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
+ +EM+ +G P + ++T++ L ++A R ++M VG +P + F+
Sbjct: 418 DMAMVVWNEMKDKGILPGIHMFSTLIISLCHENKLDDACRYFQQMLDVGIRPTANMFSAF 477
Query: 349 IYTLGRAS 356
L A
Sbjct: 478 KRALMAAG 485
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 107/264 (40%), Gaps = 11/264 (4%)
Query: 87 LKQDHVC-----NAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEM 139
LK D VC + QP +I+ + + A+GI+ S S IY
Sbjct: 242 LKVDEVCREMKDDGFQPDVVTYGIIINAYCKAKKYDEAIGIYHDMLS-KNVNPSPHIYCT 300
Query: 140 MVDILGKVRQMDQMRALLEE-MSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
+ LG +MD+ E+ + G T V+ + + + +DA R E+ G
Sbjct: 301 FITGLGNGSRMDEAFEFFEKSKASGFPPEAPTYNAVVSAYCWSMRIDDAYRIVGEMKELG 360
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLELKS--CIPPNAHTFNIFIHGWCKINRVDEA 256
+ N T +++L L K G+ + A SVF + S P+ T+ I + +C N++D A
Sbjct: 361 IGPNARTYDIILVHLIKGGRTKEAYSVFQRMSSETGCEPSVSTYAIMVRMFCNENQLDMA 420
Query: 257 QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSY 316
EMK G P + +ST+I S C + +M G P ++
Sbjct: 421 MVVWNEMKDKGILPGIHMFSTLIISLCHENKLDDACRYFQQMLDVGIRPTANMFSAFKRA 480
Query: 317 LAKSGDFEEAIRITEKMKIVGSKP 340
L +G I +K+ + + P
Sbjct: 481 LMAAGMENTVIHFAKKVDKLRNTP 504
>gi|18394846|ref|NP_564110.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174883|sp|Q9LN22.1|PPR54_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g20300, mitochondrial; Flags: Precursor
gi|9558596|gb|AAF88159.1|AC026234_10 Contains similarity to a hypothetical protein T3P18.15 gi|5454201
from Arabidopsis thaliana BAC T3P18 gb|AC005698 and
contains multiple PPR PF|01535 repeats [Arabidopsis
thaliana]
gi|17386104|gb|AAL38598.1|AF446865_1 At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|15450347|gb|AAK96467.1| At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|332191838|gb|AEE29959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 537
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 193/385 (50%), Gaps = 7/385 (1%)
Query: 117 ALGIFRWAGSCPGYEHSSE-IYEMMVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKV 174
+L F WA S Y+H S Y M+D+ GKVRQ D L++ M ++ +++ T +
Sbjct: 133 SLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTIL 192
Query: 175 MRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIP 234
+RR+ AG +AV F+ + +G + ++++ L ++ + A+S F LK
Sbjct: 193 IRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFE 252
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYEL 294
P+ + + GWC+ + EA+ +EMK G P V +YS +I + CR S+ +++
Sbjct: 253 PDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDV 312
Query: 295 LDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGR 354
+M GC PN +T+ +M K+G E+ +++ +MK +G +PD+ +N LI R
Sbjct: 313 FADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCR 372
Query: 355 ASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNV 414
++ AV V M + + STFNT+ A + +M + + C+PN
Sbjct: 373 DENLENAVKVLNT-MIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAK-CEPNT 430
Query: 415 QTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLF 474
T++ L++ + TD L ++ +M +K + ++ TY L++ C AY LF
Sbjct: 431 VTYNILMRMFVGSKSTDMVL-KMKKEMDDK-EVEPNVNTYRLLVTMFCGMGHWNNAYKLF 488
Query: 475 KEMIGHD-ITPRYQTCRLILDEVKQ 498
KEM+ +TP ++L ++++
Sbjct: 489 KEMVEEKCLTPSLSLYEMVLAQLRR 513
>gi|297844992|ref|XP_002890377.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336219|gb|EFH66636.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 537
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 105/385 (27%), Positives = 194/385 (50%), Gaps = 7/385 (1%)
Query: 117 ALGIFRWAGSCPGYEHSSE-IYEMMVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKV 174
+L F WA S Y+ S Y M+D+ GKVRQ D L++ M ++ +++ T +
Sbjct: 133 SLAFFNWATSRDDYDQKSPHPYNEMIDLAGKVRQFDLAWHLIDLMKSRNVEISIETFTIL 192
Query: 175 MRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIP 234
+RR+ AG +AV F+ + +G + ++++ L ++ + A+S F LK
Sbjct: 193 IRRYVRAGLASEAVHCFNRMEDYGCVPDQIAFSIVISNLSRKRRASEAQSFFDSLKDRFE 252
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYEL 294
P+ + + GWC+ + EA+ ++MK G P V +YS +I + CR S+ +++
Sbjct: 253 PDVIVYTNLVRGWCRAGEISEAEKVFKDMKLAGIEPNVYTYSIVIDALCRCGQISRAHDV 312
Query: 295 LDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGR 354
+M GC PN +T+ +M K+G E+ +++ +MK +G +PD+ +N LI T R
Sbjct: 313 FADMLDSGCAPNAITFNNLMRVHVKAGRPEKVLQVYNQMKKLGCEPDTITYNFLIETHCR 372
Query: 355 ASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNV 414
++ AV V M + + STFNT+ A + +M + + C+PN
Sbjct: 373 DENLENAVKVLNT-MIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAK-CEPNT 430
Query: 415 QTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLF 474
T++ L++ F K+ + + ++ DM +K + ++ TY L++ C AY LF
Sbjct: 431 VTYNILMR-MFAGSKSTDMVLKMKKDMDDK-EVEPNVNTYRLLVTMFCGMGHWNNAYKLF 488
Query: 475 KEMIGHD-ITPRYQTCRLILDEVKQ 498
KEM+ +TP ++L ++++
Sbjct: 489 KEMVEEKCLTPSLSLYEMVLAQLRR 513
>gi|224111544|ref|XP_002315895.1| predicted protein [Populus trichocarpa]
gi|222864935|gb|EEF02066.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 201/393 (51%), Gaps = 7/393 (1%)
Query: 96 IQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRA 155
+ PS LV + + + + AL FRWA G+++S+E Y +++ LGK++Q + +
Sbjct: 3 VSPS--LVFEALKKLSNAGALALSFFRWAEKQKGFQYSTESYHALIESLGKIKQFNVIWN 60
Query: 156 LLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK 215
L+ +M + ++ T A + RR++ A + ++AV F ++ FGL+ + +N LLDTLCK
Sbjct: 61 LVTDMKQKGLLNKETFALISRRYARARKVKEAVDAFMKMEKFGLKIESSDVNRLLDTLCK 120
Query: 216 EGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVIS 274
+VE A+ VF ++ K + ++ I + GW + + EMK G P V++
Sbjct: 121 SRQVERAQLVFDKMNKRGFVADIKSYTILLEGWGQEKNLSRLMEVYNEMKDEGFEPDVVT 180
Query: 275 YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
Y +I ++C+ + EL EM+A+ C P+ Y T+++ L EA+ E K
Sbjct: 181 YGILINAHCKSRRYDDAIELFHEMEAKNCKPSPHIYCTLINGLGAEKRLSEALEFFELSK 240
Query: 335 IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHH 394
G P++ +N ++ + R+ + EM + GV P T++ ++ G
Sbjct: 241 ASGFVPEAPTYNAVVGAYCWSERMDDVQRTID-EMRKGGVGPSARTYDIILHHLIRAGKT 299
Query: 395 EKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTY 454
+ A+ V ++M+ E C+P+V T+ +++ + D + ++ D M K L + + +
Sbjct: 300 KIAYSVFQKMS-CEGCQPSVSTYEIIVRMFCNEDRVDMAI-KVWDQMKAKGILPV-MHMF 356
Query: 455 TLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
+ +I+ LC +K + A + F+EM+ I P Q
Sbjct: 357 STLINSLCHESKLDEACMYFQEMLDVGIRPPAQ 389
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 94/211 (44%), Gaps = 4/211 (1%)
Query: 133 SSEIYEMMVDILGKVRQMDQMRALLE-EMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTF 191
S IY +++ LG +++ + E + G + T V+ + + + +D RT
Sbjct: 212 SPHIYCTLINGLGAEKRLSEALEFFELSKASGFVPEAPTYNAVVGAYCWSERMDDVQRTI 271
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC--IPPNAHTFNIFIHGWCK 249
DE+ G+ + T +++L L + GK ++A SVF ++ SC P+ T+ I + +C
Sbjct: 272 DEMRKGGVGPSARTYDIILHHLIRAGKTKIAYSVFQKM-SCEGCQPSVSTYEIIVRMFCN 330
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
+RVD A +MK G P + +ST+I S C + + EM G P
Sbjct: 331 EDRVDMAIKVWDQMKAKGILPVMHMFSTLINSLCHESKLDEACMYFQEMLDVGIRPPAQL 390
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
++ + L G + + K+ + P
Sbjct: 391 FSNLKQNLLDEGKKDTVVVFERKLDKLRKAP 421
>gi|224084978|ref|XP_002307458.1| predicted protein [Populus trichocarpa]
gi|222856907|gb|EEE94454.1| predicted protein [Populus trichocarpa]
Length = 440
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 195/391 (49%), Gaps = 5/391 (1%)
Query: 94 NAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQM 153
+ ++ S +V ++ +F++ A F WA Y HS + + ++D L K+RQ M
Sbjct: 16 SGVRVSEQIVEDVLKKFENAGMVAYRFFEWAEKQRHYNHSVKAFHTVIDSLAKIRQYQLM 75
Query: 154 RALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTL 213
+++ M +V + T +MR+++ A + E+AV TF+ + + + N N LL L
Sbjct: 76 WDVVKVMKSKRMVNVETFCIIMRKYARAQKVEEAVYTFNIMDKYDVPPNLAAFNGLLSAL 135
Query: 214 CKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI 273
CK V A+ +F +K P++ T++I + GW K + +A+ +EM +GC P ++
Sbjct: 136 CKSKNVRKAQEIFDSIKDRFVPDSKTYSILLEGWGKDPNLPKAREIFREMVSNGCRPDIV 195
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
+Y ++ C+ + +++EM + C P Y+ ++ E+A+ +M
Sbjct: 196 TYGIMVDVLCKAGRVDEALGIVNEMDSTVCKPTPFIYSVLVHTYGIENRIEDAVSTFLEM 255
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
+ G +PD +N LI +A+R++ VY EM GV P++ TFN +++ G
Sbjct: 256 ENNGIEPDVAVYNALIGAFCKANRLKN-VYRVLNEMDCKGVTPNSRTFNIILSSLIGRGE 314
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
++A+ V M K+ C+P+ T+ ++K + + + L ++ M K + + T
Sbjct: 315 TDEAYRVFLRMIKV--CEPDADTYTMMIKMFCERDELKKAL-KVWKYMKLKRFMP-SMHT 370
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
+ ++I+GLC A +L +EMI I P
Sbjct: 371 FQVLINGLCEKGDVTQACVLLEEMIEKGIRP 401
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 117/269 (43%), Gaps = 44/269 (16%)
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCI-PPNAHTFNIFIH 245
A F E+ + G + T +++D LCK G+V+ A + E+ S + P +++ +H
Sbjct: 178 AREIFREMVSNGCRPDIVTYGIMVDVLCKAGRVDEALGIVNEMDSTVCKPTPFIYSVLVH 237
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
+ NR+++A T EM+ +G P V Y+ +I ++C+ VY +L+EM +G P
Sbjct: 238 TYGIENRIEDAVSTFLEMENNGIEPDVAVYNALIGAFCKANRLKNVYRVLNEMDCKGVTP 297
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI---------------Y 350
N T+ ++S L G+ +EA R+ +M I +PD+ + +I +
Sbjct: 298 NSRTFNIILSSLIGRGETDEAYRVFLRM-IKVCEPDADTYTMMIKMFCERDELKKALKVW 356
Query: 351 TLGRASRVQEAVYVYQV-------------------EMPENGVAPDTSTFNTMITMFSHH 391
+ R +++ +QV EM E G+ P TF + +
Sbjct: 357 KYMKLKRFMPSMHTFQVLINGLCEKGDVTQACVLLEEMIEKGIRPSGVTFGRLRQLLIKE 416
Query: 392 GHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
G E++ K K NV PL
Sbjct: 417 GR--------EDVLKFLQKKINVLVNDPL 437
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/360 (21%), Positives = 155/360 (43%), Gaps = 55/360 (15%)
Query: 163 GHIVTLNTIAKVMRRFSGAG-------QWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK 215
G V+ + V+++F AG +W + R ++ + + + ++D+L K
Sbjct: 17 GVRVSEQIVEDVLKKFENAGMVAYRFFEWAEKQRHYNH--------SVKAFHTVIDSLAK 68
Query: 216 EGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISY 275
+ +L V +KS N TF I + + + +V+EA +T
Sbjct: 69 IRQYQLMWDVVKVMKSKRMVNVETFCIIMRKYARAQKVEEAVYT---------------- 112
Query: 276 STIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKI 335
+N Y++ PPN+ + ++S L KS + +A I + +K
Sbjct: 113 ----------FNIMDKYDV---------PPNLAAFNGLLSALCKSKNVRKAQEIFDSIKD 153
Query: 336 VGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHE 395
PDS+ ++ L+ G+ + +A +++ EM NG PD T+ M+ + G +
Sbjct: 154 -RFVPDSKTYSILLEGWGKDPNLPKAREIFR-EMVSNGCRPDIVTYGIMVDVLCKAGRVD 211
Query: 396 KAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYT 455
+A ++ EM+ CKP + L+ + + ++ +S L+ + + + D+ Y
Sbjct: 212 EALGIVNEMDS-TVCKPTPFIYSVLVHTYGIENRIEDAVSTFLE--MENNGIEPDVAVYN 268
Query: 456 LVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
+I C+AN+ + Y + EM +TP +T +IL + + D A ++ M K+
Sbjct: 269 ALIGAFCKANRLKNVYRVLNEMDCKGVTPNSRTFNIILSSLIGRGETDEAYRVFLRMIKV 328
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 117/279 (41%), Gaps = 18/279 (6%)
Query: 96 IQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEI---------------YEMM 140
++ + + + + RF D K+ + G P + EI Y +M
Sbjct: 141 VRKAQEIFDSIKDRFVPDSKTYSILLEGWGKDPNLPKAREIFREMVSNGCRPDIVTYGIM 200
Query: 141 VDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSG-AGQWEDAVRTFDELGTFGL 199
VD+L K ++D+ ++ EM I V+ G + EDAV TF E+ G+
Sbjct: 201 VDVLCKAGRVDEALGIVNEMDSTVCKPTPFIYSVLVHTYGIENRIEDAVSTFLEMENNGI 260
Query: 200 EKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQW 258
E + N L+ CK +++ V E+ + PN+ TFNI + DEA
Sbjct: 261 EPDVAVYNALIGAFCKANRLKNVYRVLNEMDCKGVTPNSRTFNIILSSLIGRGETDEAYR 320
Query: 259 TIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLA 318
M C P +Y+ +I+ +C + K ++ M+ + P++ T+ +++ L
Sbjct: 321 VFLRMI-KVCEPDADTYTMMIKMFCERDELKKALKVWKYMKLKRFMPSMHTFQVLINGLC 379
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
+ GD +A + E+M G +P F L L + R
Sbjct: 380 EKGDVTQACVLLEEMIEKGIRPSGVTFGRLRQLLIKEGR 418
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 95/198 (47%), Gaps = 2/198 (1%)
Query: 136 IYEMMVDILG-KVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
IY ++V G + R D + LE + G + ++ F A + ++ R +E+
Sbjct: 231 IYSVLVHTYGIENRIEDAVSTFLEMENNGIEPDVAVYNALIGAFCKANRLKNVYRVLNEM 290
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVD 254
G+ N+ T N++L +L G+ + A VFL + P+A T+ + I +C+ + +
Sbjct: 291 DCKGVTPNSRTFNIILSSLIGRGETDEAYRVFLRMIKVCEPDADTYTMMIKMFCERDELK 350
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
+A + MK P + ++ +I C + + ++ LL+EM +G P+ VT+ +
Sbjct: 351 KALKVWKYMKLKRFMPSMHTFQVLINGLCEKGDVTQACVLLEEMIEKGIRPSGVTFGRLR 410
Query: 315 SYLAKSGDFEEAIRITEK 332
L K G E+ ++ +K
Sbjct: 411 QLLIKEGR-EDVLKFLQK 427
>gi|225433712|ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Vitis vinifera]
Length = 746
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 193/387 (49%), Gaps = 17/387 (4%)
Query: 117 ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK--GHIVTLNT--IA 172
AL FRW G+ H+ + Y +M++ILG+ R ++ R + + K G V L
Sbjct: 111 ALHFFRWV-EAKGFTHNEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGGAVKLGDRFFN 169
Query: 173 KVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC 232
++R + AG ++++++ F + G+ + T N LL + K G+ +A+ +F E+
Sbjct: 170 SLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDT 229
Query: 233 --IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSK 290
+ P+ +TFNI I G+C + VDE W +EM C P V++Y+T++ CR
Sbjct: 230 YGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKI 289
Query: 291 VYELLDEM--QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
+ ++ M ++ PNVVTYTT++ D EA+ + +M G KP+ +N L
Sbjct: 290 AHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTL 349
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
I L A ++ + + + + + G PDT T NT+I G E+AF V E+M++L
Sbjct: 350 IQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSEL- 408
Query: 409 HCKPNVQTFHPLLKSCFKTG---KTDECLSQLLDDMVNKHHLSLD--ITTYTLVIHGLCR 463
+P+ T+ L++S + G + +E +L + + H + + Y + LC
Sbjct: 409 RVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCS 468
Query: 464 ANKCEWAYLLFKEMI--GHDITPRYQT 488
K + A +F++++ G P Y+T
Sbjct: 469 NGKTKKAERVFRQLMKRGTQDPPSYKT 495
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 93/190 (48%), Gaps = 3/190 (1%)
Query: 320 SGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTS 379
+G F+E+I++ + MK +G P FN L+ + + R A ++ + GV PDT
Sbjct: 178 AGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTY 237
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLD 439
TFN +I F + ++ F +EM++ + C P+V T++ L+ + GK + ++
Sbjct: 238 TFNILIRGFCMNSMVDEGFWFFKEMSRFK-CDPDVVTYNTLVDGLCRAGKV-KIAHNVVK 295
Query: 440 DMVNKH-HLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQ 498
MV K +LS ++ TYT +I G C A L EM+ + P T ++ + +
Sbjct: 296 GMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCE 355
Query: 499 KHMYDAAEKI 508
D ++I
Sbjct: 356 AQKLDKIKEI 365
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 166/391 (42%), Gaps = 22/391 (5%)
Query: 111 KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM--SKGHIVTL 168
K D AL + S G + + Y ++ L + +++D+++ +LE M G I
Sbjct: 321 KQDMAEALSLLAEMVS-RGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDT 379
Query: 169 NTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE 228
T+ +++ G+ E+A F+++ ++ ++ T ++L+ +LC+ G A F E
Sbjct: 380 CTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDE 439
Query: 229 LK---------SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
L C P A +N C + +A+ +++ G SY T+I
Sbjct: 440 LAEKEILLHDVGCKPLVA-AYNPMFEYLCSNGKTKKAERVFRQLMKRGTQDPP-SYKTLI 497
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
+CR+ ++LL M + P+ TY ++ L K GD A + EKM
Sbjct: 498 LGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHL 557
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
P + F+ ++ L E+ + ++ M E + + + + G +KAF
Sbjct: 558 PTTAIFHSILAALVEKGCAHESASLVKL-MLERRIRQNIDLSTHTVRLLYKSGLQDKAFM 616
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIH 459
+ L + + L+ ++ K E LL + + S+DI + VI
Sbjct: 617 TI----GLLYENGYLVKMEELVSFLCQSRKLLEAQKMLLFSLEKRQ--SVDIDMCSTVIS 670
Query: 460 GLCRANKCEWAYLLFKEMIGHDITPRYQTCR 490
GLC+A+K A+ L+ E++ + R TC+
Sbjct: 671 GLCKAHKVSEAFALYYELVEKGMQHRL-TCQ 700
>gi|242093812|ref|XP_002437396.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
gi|241915619|gb|EER88763.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
Length = 786
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 120/436 (27%), Positives = 215/436 (49%), Gaps = 16/436 (3%)
Query: 83 VFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVD 142
F + ++D + A PS L+ L W+ AL + RWAG+ + S+ EM+V
Sbjct: 92 AFLASRRDELLPADIPS--LLKAL--ELSGHWEWALALLRWAGAEGAADASA--LEMVVR 145
Query: 143 ILGKVRQMDQMRALLEEMS--KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLE 200
LG+ Q D + ALL+EM G + + V+ S AG++E AV F EL G+
Sbjct: 146 ALGREGQHDAVCALLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERAVELFAELRRQGVA 205
Query: 201 KNTETMNLLLDTLCKEGKVELARSVFL--ELKSC-IPPNAHTFNIFIHGWCKINRVDEAQ 257
T N++LD + G+ R V L E+++ + P+ T + I C+ VDEA
Sbjct: 206 PTLVTYNVVLDVYGRMGR-SWPRIVALLDEMRAAGVEPDDFTASTVIAACCRDGLVDEAV 264
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
+++K G PCV++Y+ ++Q + + N+++ +L EM+ GC P+ VTY +
Sbjct: 265 AFFEDLKARGHTPCVVTYNALLQVFGKAGNYTEALRVLKEMEQDGCQPDAVTYNELAGTY 324
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
A++G +EEA + + M G P++ +N ++ G +V EA+ ++ +M ++G P+
Sbjct: 325 ARAGFYEEAAKCLDTMTSKGLLPNAFTYNTVMTAYGNIGKVDEALALFD-QMKKSGCVPN 383
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
+T+N ++ M +L EM++ C PN T++ +L C K G D ++++
Sbjct: 384 VNTYNFILGMLGKKSRFTVMLEMLGEMSR-SGCTPNRVTWNTMLAVCGKRGMEDY-VTRV 441
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVK 497
L+ M + L TY +I R A+ ++ EM P T +L+ +
Sbjct: 442 LEGM-KSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFAPCLTTYNALLNVLS 500
Query: 498 QKHMYDAAEKIEAVMK 513
++ + A+ I + M+
Sbjct: 501 RQGDWSTAQSIVSKMR 516
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/450 (21%), Positives = 187/450 (41%), Gaps = 88/450 (19%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKG----HIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++ + GK + +L+EM + VT N +A R AG +E+A + D
Sbjct: 282 YNALLQVFGKAGNYTEALRVLKEMEQDGCQPDAVTYNELAGTYAR---AGFYEEAAKCLD 338
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK--SCIPPNAHTFNIFIHGWCKI 250
+ + GL N T N ++ GKV+ A ++F ++K C+P N +T+N + K
Sbjct: 339 TMTSKGLLPNAFTYNTVMTAYGNIGKVDEALALFDQMKKSGCVP-NVNTYNFILGMLGKK 397
Query: 251 NRVDEAQWTIQEMKGHGCHP------------------------------CVI-----SY 275
+R + EM GC P C + +Y
Sbjct: 398 SRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMKSCGVELSRDTY 457
Query: 276 STIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKI 335
+T+I +Y R + + +++ +EM + G P + TY +++ L++ GD+ A I KM+
Sbjct: 458 NTLIAAYGRCGSRTNAFKMYNEMTSAGFAPCLTTYNALLNVLSRQGDWSTAQSIVSKMRT 517
Query: 336 VGSKPDSRFFNCLIYTLGRASRV------QEAVYVYQV---------------------- 367
G KP+ + ++ L+ + + ++ VY V
Sbjct: 518 KGFKPNDQSYSLLLQCYAKGGNIAGIDAIEKEVYGGTVFPSWVILRTLVIANFKCRRLGG 577
Query: 368 ------EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLL 421
E+ G PD FN+M++M++ +G + K + + + K P++ T++ L+
Sbjct: 578 IEKAFQEVKARGYNPDLVIFNSMLSMYAKNGMYSKVTEIFDSI-KQSGLSPDLITYNSLM 636
Query: 422 ---KSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
C ++ + ++ L+QL V D+ +Y VI+G C+ + A + EMI
Sbjct: 637 DMYAKCSESWEAEKILNQLKSSQVKP-----DVVSYNTVINGFCKQGLIKEAQRILSEMI 691
Query: 479 GHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+ P T ++ M+ A ++
Sbjct: 692 ADGMAPCVVTYHTLVGGYASLEMFSEAREV 721
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 145/315 (46%), Gaps = 7/315 (2%)
Query: 126 SCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQW 184
SC G E S + Y ++ G+ + EM S G L T ++ S G W
Sbjct: 447 SC-GVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFAPCLTTYNALLNVLSRQGDW 505
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIF 243
A ++ T G + N ++ +LLL K G + ++ E+ + P+
Sbjct: 506 STAQSIVSKMRTKGFKPNDQSYSLLLQCYAKGGNIAGIDAIEKEVYGGTVFPSWVILRTL 565
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
+ K R+ + QE+K G +P ++ +++++ Y + +SKV E+ D ++ G
Sbjct: 566 VIANFKCRRLGGIEKAFQEVKARGYNPDLVIFNSMLSMYAKNGMYSKVTEIFDSIKQSGL 625
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
P+++TY ++M AK + EA +I ++K KPD +N +I + ++EA
Sbjct: 626 SPDLITYNSLMDMYAKCSESWEAEKILNQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQR 685
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH-CKPNVQTFHPLLK 422
+ EM +G+AP T++T++ ++ +A V+ M ++H KP T+ ++
Sbjct: 686 ILS-EMIADGMAPCVVTYHTLVGGYASLEMFSEAREVINYM--IQHNLKPMELTYRRVVD 742
Query: 423 SCFKTGKTDECLSQL 437
S K + +E S L
Sbjct: 743 SYCKAKRFEEARSFL 757
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 160/343 (46%), Gaps = 6/343 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
+ M+ + GK D + +LE M S G ++ +T ++ + G +A + ++E+
Sbjct: 422 WNTMLAVCGKRGMEDYVTRVLEGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMT 481
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVD 254
+ G T N LL+ L ++G A+S+ ++++ PN ++++ + + K +
Sbjct: 482 SAGFAPCLTTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNDQSYSLLLQCYAKGGNIA 541
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
+E+ G P + T++ + + + + E++A+G P++V + +++
Sbjct: 542 GIDAIEKEVYGGTVFPSWVILRTLVIANFKCRRLGGIEKAFQEVKARGYNPDLVIFNSML 601
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
S AK+G + + I + +K G PD +N L+ + S EA + ++ + V
Sbjct: 602 SMYAKNGMYSKVTEIFDSIKQSGLSPDLITYNSLMDMYAKCSESWEAEKILN-QLKSSQV 660
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
PD ++NT+I F G ++A +L EM + P V T+H L+ E
Sbjct: 661 KPDVVSYNTVINGFCKQGLIKEAQRILSEMIA-DGMAPCVVTYHTLVGGYASLEMFSEA- 718
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
++++ M+ +H+L TY V+ C+A + E A E+
Sbjct: 719 REVINYMI-QHNLKPMELTYRRVVDSYCKAKRFEEARSFLSEV 760
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 111/256 (43%), Gaps = 9/256 (3%)
Query: 111 KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI----V 166
+ DW +A I G++ + + Y +++ K + + A+ +E+ G + V
Sbjct: 502 QGDWSTAQSIVSKM-RTKGFKPNDQSYSLLLQCYAKGGNIAGIDAIEKEVYGGTVFPSWV 560
Query: 167 TLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF 226
L T+ + G E A F E+ G + N +L K G +F
Sbjct: 561 ILRTLVIANFKCRRLGGIEKA---FQEVKARGYNPDLVIFNSMLSMYAKNGMYSKVTEIF 617
Query: 227 LELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQ 285
+K S + P+ T+N + + K + EA+ + ++K P V+SY+T+I +C+Q
Sbjct: 618 DSIKQSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKSSQVKPDVVSYNTVINGFCKQ 677
Query: 286 YNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFF 345
+ +L EM A G P VVTY T++ A F EA + M KP +
Sbjct: 678 GLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFSEAREVINYMIQHNLKPMELTY 737
Query: 346 NCLIYTLGRASRVQEA 361
++ + +A R +EA
Sbjct: 738 RRVVDSYCKAKRFEEA 753
>gi|449469499|ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
gi|449487784|ref|XP_004157799.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
Length = 502
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 202/404 (50%), Gaps = 10/404 (2%)
Query: 96 IQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRA 155
+Q + LV+K++ R AL F+ P Y HS+ ++ +DI G++R + A
Sbjct: 74 LQFTPELVDKVLKRLWFHGPKALQFFKHLEYHPSYAHSASSFDHAIDIAGRMRDYKTVWA 133
Query: 156 LLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLC 214
L+ M I + T A + RF AG+ + A++ F + G ++ + N +LD LC
Sbjct: 134 LVARMRARRIGPSSKTFAIIAERFVAAGKPDRAIKVFLSMREHGCPQDLHSFNTILDILC 193
Query: 215 KEGKVELA-RSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI 273
K +VE+A ++F L+ + ++NI +GWC I R +A ++EM G P +
Sbjct: 194 KSKRVEMAYNNLFKVLRGKFKADVVSYNIIANGWCLIKRTPKALEVLKEMVERGLTPTIT 253
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
+Y+ +++ Y R + +E +M+ + +VVTYTT++ G+ + A ++ +M
Sbjct: 254 TYNILLKGYFRAGQLKEAWEFFLQMKEREVEIDVVTYTTMVHGFGVVGEIKRARKVFNEM 313
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
G P + +N +I L + V+ AV +++ EM + G P+ +T+N +I H G+
Sbjct: 314 VGEGILPSTATYNAMIQVLCKKDSVENAVLMFE-EMVKKGYVPNLTTYNVVIRGLFHAGN 372
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
+KA +E M K + C+PNVQT++ ++ G ++ LS + + M +LD T
Sbjct: 373 MDKAMEFIERM-KTDGCEPNVQTYNVAIRYFCDAGDVEKGLS-MFEKMGQGSLPNLD--T 428
Query: 454 YTLVIHGLCRANKCE---WAYLLFKEMIGHDITPRYQTCRLILD 494
Y ++I + K E A L EM+ PR T +L+
Sbjct: 429 YNVLISAMFVRKKSEDLVVAGKLLLEMVDRGFIPRKFTFNRVLN 472
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 110/242 (45%), Gaps = 5/242 (2%)
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
S+ I R ++ V+ L+ M+A+ P+ T+ + +G + AI++ M
Sbjct: 114 SFDHAIDIAGRMRDYKTVWALVARMRARRIGPSSKTFAIIAERFVAAGKPDRAIKVFLSM 173
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
+ G D FN ++ L ++ RV+ A Y ++ D ++N + +
Sbjct: 174 REHGCPQDLHSFNTILDILCKSKRVEMA-YNNLFKVLRGKFKADVVSYNIIANGWCLIKR 232
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
KA VL+EM + P + T++ LLK F+ G+ E L + + + +D+ T
Sbjct: 233 TPKALEVLKEMVE-RGLTPTITTYNILLKGYFRAGQLKEAWEFFLQ--MKEREVEIDVVT 289
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEAVM 512
YT ++HG + + A +F EM+G I P T ++ + K+ + +A E ++
Sbjct: 290 YTTMVHGFGVVGEIKRARKVFNEMVGEGILPSTATYNAMIQVLCKKDSVENAVLMFEEMV 349
Query: 513 KK 514
KK
Sbjct: 350 KK 351
>gi|296089633|emb|CBI39452.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 193/387 (49%), Gaps = 17/387 (4%)
Query: 117 ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK--GHIVTLNT--IA 172
AL FRW G+ H+ + Y +M++ILG+ R ++ R + + K G V L
Sbjct: 111 ALHFFRWV-EAKGFTHNEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGGAVKLGDRFFN 169
Query: 173 KVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC 232
++R + AG ++++++ F + G+ + T N LL + K G+ +A+ +F E+
Sbjct: 170 SLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDT 229
Query: 233 --IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSK 290
+ P+ +TFNI I G+C + VDE W +EM C P V++Y+T++ CR
Sbjct: 230 YGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKI 289
Query: 291 VYELLDEM--QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
+ ++ M ++ PNVVTYTT++ D EA+ + +M G KP+ +N L
Sbjct: 290 AHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTL 349
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
I L A ++ + + + + + G PDT T NT+I G E+AF V E+M++L
Sbjct: 350 IQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSEL- 408
Query: 409 HCKPNVQTFHPLLKSCFKTG---KTDECLSQLLDDMVNKHHLSLD--ITTYTLVIHGLCR 463
+P+ T+ L++S + G + +E +L + + H + + Y + LC
Sbjct: 409 RVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCS 468
Query: 464 ANKCEWAYLLFKEMI--GHDITPRYQT 488
K + A +F++++ G P Y+T
Sbjct: 469 NGKTKKAERVFRQLMKRGTQDPPSYKT 495
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 93/190 (48%), Gaps = 3/190 (1%)
Query: 320 SGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTS 379
+G F+E+I++ + MK +G P FN L+ + + R A ++ + GV PDT
Sbjct: 178 AGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTY 237
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLD 439
TFN +I F + ++ F +EM++ + C P+V T++ L+ + GK + ++
Sbjct: 238 TFNILIRGFCMNSMVDEGFWFFKEMSRFK-CDPDVVTYNTLVDGLCRAGKV-KIAHNVVK 295
Query: 440 DMVNKH-HLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQ 498
MV K +LS ++ TYT +I G C A L EM+ + P T ++ + +
Sbjct: 296 GMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCE 355
Query: 499 KHMYDAAEKI 508
D ++I
Sbjct: 356 AQKLDKIKEI 365
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 162/391 (41%), Gaps = 50/391 (12%)
Query: 111 KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM--SKGHIVTL 168
K D AL + S G + + Y ++ L + +++D+++ +LE M G I
Sbjct: 321 KQDMAEALSLLAEMVS-RGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDT 379
Query: 169 NTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE 228
T+ +++ G+ E+A F+++ ++ ++ T ++L+ +LC+ G A F E
Sbjct: 380 CTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDE 439
Query: 229 LK---------SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
L C P A +N C + +A+ +++ G SY T+I
Sbjct: 440 LAEKEILLHDVGCKPLVA-AYNPMFEYLCSNGKTKKAERVFRQLMKRGTQDPP-SYKTLI 497
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
+CR+ ++LL M + P+ TY ++ L K GD A + EKM
Sbjct: 498 LGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHL 557
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
P + F+ ++ L E G A ++++ ++ + + + H
Sbjct: 558 PTTAIFHSILAAL-----------------VEKGCAHESASLVKLMLERRIRQNIDLSTH 600
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIH 459
+EE L+ ++ K E LL + + S+DI + VI
Sbjct: 601 TMEE----------------LVSFLCQSRKLLEAQKMLLFSLEKRQ--SVDIDMCSTVIS 642
Query: 460 GLCRANKCEWAYLLFKEMIGHDITPRYQTCR 490
GLC+A+K A+ L+ E++ + R TC+
Sbjct: 643 GLCKAHKVSEAFALYYELVEKGMQHRL-TCQ 672
>gi|356499705|ref|XP_003518677.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Glycine max]
Length = 500
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 130/461 (28%), Positives = 225/461 (48%), Gaps = 31/461 (6%)
Query: 66 DIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFK---DDWKSALGIFR 122
D+ + + S+ +++ QSLK + + S+ ++++++ R + + L FR
Sbjct: 33 DVQKVFGILSSTSTPEQLKQSLK----SSGVFLSNDVIDQVLKRVRFSHGNPSQTLEFFR 88
Query: 123 WAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGH--IVTLNTIAKVMRRFSG 180
+ G G+ HSS + M+ ILG+ R Q+ LL E + +T T+ V+ R +
Sbjct: 89 YTGRRKGFYHSSFSLDTMLYILGRSRMFGQVWELLIEARRKDQTAITARTVMVVLGRIAK 148
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTF 240
V +F + E +T N LL TLC+E + AR+V+ LK PN TF
Sbjct: 149 VCSVRQTVESFRKFRKLVQEFDTNCFNALLRTLCQEKSMADARNVYHSLKHRFRPNLQTF 208
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
NI + GW ++A +EMK G P V++Y++++ YC+ K Y++LDEM+
Sbjct: 209 NILLSGW---KTPEDADLFFKEMKEMGVTPDVVTYNSLMDVYCKGREIEKAYKMLDEMRD 265
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
Q P+V+TYT ++ L G ++A + ++MK G PD+ +N I A R+ +
Sbjct: 266 QDFSPDVITYTCIIGGLGLIGQPDKARNVLKEMKEYGCYPDAAAYNAAIRNFCIAKRLGD 325
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
A + + EM G++P+ +T+N +F + ++++ + M +E C PN Q+ L
Sbjct: 326 AHGLVE-EMVTKGLSPNATTYNLFFRVFYWSNDLQSSWNMYQRM-MVEGCLPNTQSCMFL 383
Query: 421 LKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLV----IHGLCRANKCEWAYLLFKE 476
++ F+ + E Q DMV K +YTLV LC K E A F E
Sbjct: 384 IR-LFRRHEKVEMALQFWGDMVEK-----GFGSYTLVSDVLFDLLCDMGKLEEAEKCFLE 437
Query: 477 MIGHDITPRYQTCRLI--LDEVKQKHMYDAAEKIEAVMKKL 515
M+ P + + R I L E+ +H E ++++M+K+
Sbjct: 438 MVEKGQKPSHVSFRRIKVLMELANRH-----EALQSLMQKM 473
>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
Length = 545
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 115/388 (29%), Positives = 193/388 (49%), Gaps = 14/388 (3%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS 161
LV K+IHR D +A +F+WAG + H+ ++ + K R+++ +
Sbjct: 71 LVGKVIHRIPDP-NTAWEVFQWAGKQSKFTHNRFTCNNLLSVYVKARRVEDAHLFFQSHM 129
Query: 162 KGHI----VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEG 217
K V+ NT+ M F AG + A+ F E+ G+ + N++L LC G
Sbjct: 130 KNVFEPDEVSYNTL---MNGFFKAGDVKKALALFGEMKDSGIAV-LRSHNIVLRGLCSGG 185
Query: 218 KVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
K+ +A VF ++ PN ++ I I G CK +VD+A ++M +P V++Y
Sbjct: 186 KISMAWEVFKDMSGIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGA 245
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM-KIV 336
+I +Q + Y+L +E +A+GC P VVTY T++ L K G E A+ + + M +
Sbjct: 246 LIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREP 305
Query: 337 GSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEK 396
KPD ++ LI L ++R ++A +Y+ EM + G +PD T+NT++ G +K
Sbjct: 306 HLKPDMFTYSALINGLNLSNRGEKAYELYE-EMLDTGCSPDVVTYNTLLDGLCKSGCEDK 364
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTL 456
A + +M C PNV T+ L+ K + + + +L +M + L D T+T
Sbjct: 365 AMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAV-KLAKEMEGRSLLP-DAVTFTT 422
Query: 457 VIHGLCRANKCEWAYLLFKEMIGHDITP 484
VI LC+ ++ + A+ LF E IG P
Sbjct: 423 VIQKLCKESRIDEAHELF-ESIGKTCKP 449
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 153/353 (43%), Gaps = 55/353 (15%)
Query: 163 GHIVTLNTIAKVMRRFSGAG------QWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKE 216
G I+ + + KV+ R QW F N T N LL K
Sbjct: 64 GDILVPDLVGKVIHRIPDPNTAWEVFQWAGKQSKFTH--------NRFTCNNLLSVYVKA 115
Query: 217 GKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISY 275
+VE A F +K+ P+ ++N ++G+ K V +A EMK G + S+
Sbjct: 116 RRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGEMKDSGI-AVLRSH 174
Query: 276 STIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKI 335
+ +++ C S +E+ +M PN+++YT ++ L KS ++AI + ++M
Sbjct: 175 NIVLRGLCSGGKISMAWEVFKDMSGI-FSPNLISYTIMIDGLCKSRKVDKAITLFKQM-- 231
Query: 336 VGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHE 395
V +A+Y PD T+ +I +
Sbjct: 232 ----------------------VDKAIY------------PDVVTYGALIDGLGKQRRVK 257
Query: 396 KAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYT 455
+A+ + EE + + C P V T++ ++ K G+ + L+ L DDMV + HL D+ TY+
Sbjct: 258 EAYDLFEEA-RAKGCHPTVVTYNTMIDGLCKCGRIENALT-LYDDMVREPHLKPDMFTYS 315
Query: 456 LVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+I+GL +N+ E AY L++EM+ +P T +LD + + D A +I
Sbjct: 316 ALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEI 368
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 148/323 (45%), Gaps = 10/323 (3%)
Query: 61 SPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSAL 118
SP L ++I + D+ KQ V AI P LI + K A
Sbjct: 202 SPNLISYTIMIDGLCKSRKVDKAITLFKQ-MVDKAIYPDVVTYGALIDGLGKQRRVKEAY 260
Query: 119 GIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHI-VTLNTIAKVMR 176
+F A G + Y M+D L K +++ L ++M + H+ + T + ++
Sbjct: 261 DLFEEA-RAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALIN 319
Query: 177 RFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIP 234
+ + + E A ++E+ G + T N LLD LCK G + A +F + + +
Sbjct: 320 GLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCD 379
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYEL 294
PN T+ + I +CK++R+ +A +EM+G P ++++T+IQ C++ + +EL
Sbjct: 380 PNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHEL 439
Query: 295 LDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGR 354
+ + + C P+ V + T+++ K ++A ++ ++M G P + L+ R
Sbjct: 440 FESI-GKTCKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCR 498
Query: 355 ASRVQEAVYVYQVEMPENGVAPD 377
R +A+ +Y EM E G P+
Sbjct: 499 TGRYSDALIMYH-EMIEMGFPPE 520
>gi|356541430|ref|XP_003539180.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Glycine max]
Length = 492
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 206/414 (49%), Gaps = 12/414 (2%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGS-CPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM 160
LVNK + R + AL F+ P Y HS ++ VDI ++R + AL+ M
Sbjct: 68 LVNKTLKRLWNHGPKALLFFKHLDRHLPSYTHSPSSFDHAVDIAARMRDFNSAWALVGRM 127
Query: 161 SKGHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV 219
+ + T+A + R++ G+ AVRTF + GL ++ + N LLD LCK +V
Sbjct: 128 RSLRLGPSPKTLAILAERYASIGKPHRAVRTFLSMHEHGLHQDLHSFNTLLDILCKSNRV 187
Query: 220 ELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
E A + LKS P+ ++NI +G+C R A ++EM G P +++Y+T++
Sbjct: 188 ETAHDLLRTLKSRFRPDTVSYNILANGYCLKKRTPMALRVLKEMVQRGIEPTMVTYNTML 247
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
+ Y R + +E EM+ + C +VV+YTTV+ ++G+ ++A R+ ++M G
Sbjct: 248 KGYFRSNQIKEAWEFYLEMKKRKCEIDVVSYTTVIHGFGEAGEVKKAKRVFDEMVKEGVA 307
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV-APDTSTFNTMITMFSHHGHHEKAF 398
P+ +N LI + VQ AV V++ EM GV +P+ TFN +I H G E+A
Sbjct: 308 PNVATYNALIQVFCKKDSVQNAVAVFE-EMVREGVCSPNVVTFNVVIRGLCHVGDMERAL 366
Query: 399 HVLEEMNKLEH-CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLV 457
+E M EH + +VQT++ +++ G+ ++ L ++ M + L ++ TY ++
Sbjct: 367 GFMERMG--EHGLRASVQTYNVVIRYFCDAGEIEKGL-EVFGKMGDGLCLP-NLDTYNVL 422
Query: 458 IHGLCRANKCE---WAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
I + K E A L EM+ PR T +L+ + D A+ I
Sbjct: 423 ISAMFVRKKSEDLVVAGKLLMEMVERGFLPRKFTFNRVLNGLVITGNQDFAKDI 476
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 120/261 (45%), Gaps = 4/261 (1%)
Query: 146 KVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTET 205
K R +R L E + +G T+ T +++ + + Q ++A + E+ E + +
Sbjct: 218 KKRTPMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVS 277
Query: 206 MNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
++ + G+V+ A+ VF E+ K + PN T+N I +CK + V A +EM
Sbjct: 278 YTTVIHGFGEAGEVKKAKRVFDEMVKEGVAPNVATYNALIQVFCKKDSVQNAVAVFEEMV 337
Query: 265 GHG-CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF 323
G C P V++++ +I+ C + + ++ M G +V TY V+ Y +G+
Sbjct: 338 REGVCSPNVVTFNVVIRGLCHVGDMERALGFMERMGEHGLRASVQTYNVVIRYFCDAGEI 397
Query: 324 EEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV--EMPENGVAPDTSTF 381
E+ + + KM P+ +N LI + + ++ V ++ EM E G P TF
Sbjct: 398 EKGLEVFGKMGDGLCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLMEMVERGFLPRKFTF 457
Query: 382 NTMITMFSHHGHHEKAFHVLE 402
N ++ G+ + A +L
Sbjct: 458 NRVLNGLVITGNQDFAKDILR 478
>gi|122236160|sp|Q0WP85.1|PP150_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g13420, mitochondrial; Flags: Precursor
gi|110738270|dbj|BAF01064.1| hypothetical protein [Arabidopsis thaliana]
Length = 509
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 202/417 (48%), Gaps = 19/417 (4%)
Query: 84 FQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDI 143
F ++ N I + L+++ + R + + K AL F++ S P + + +++DI
Sbjct: 55 FHFMESSLQLNGISLTPNLIHQTLLRLRHNSKIALSFFQYLRSLPSPSTTPTSFNLIIDI 114
Query: 144 LGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNT 203
LG+VRQ D +R L+ EM + + T +++R AG AVR FD+ F +
Sbjct: 115 LGRVRQFDVVRQLIVEMDQ---TSPETFLILVKRLIAAGLTRQAVRAFDDAPCFLENRRF 171
Query: 204 ETM--NLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQ 261
+ LLDTLCK G ++A VF E K + + I I GWCK+ R+D A+ +
Sbjct: 172 RLVEFGFLLDTLCKYGYTKMAVGVFNERKEEFGSDEKVYTILIAGWCKLRRIDMAEKFLV 231
Query: 262 EMKGHGCHPCVISYSTIIQSYCR----------QYNFSKVYELLDEMQAQGCPPNVVTYT 311
EM G P V++Y+ ++ CR + N ++ DEM+ +G P+V +++
Sbjct: 232 EMIESGIEPNVVTYNVLLNGICRTASLHPEERFERNVRNAEKVFDEMRQRGIEPDVTSFS 291
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
V+ +++ E + + MK G P + ++ L R++EA + + M E
Sbjct: 292 IVLHMYSRAHKAELTLDKMKLMKAKGISPTIETYTSVVKCLCSCGRLEEAEELLET-MVE 350
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
+G++P ++T+N + A ++ +M K CKP+ QT++ LL + GK
Sbjct: 351 SGISPSSATYNCFFKEYKGRKDANGAMNLYRKM-KNGLCKPSTQTYNVLLGTFINLGKM- 408
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
E + ++ DD+ D+ +YT ++HGLC K + A F EMI P+ T
Sbjct: 409 ETVKEIWDDL-KASETGPDLDSYTSLVHGLCSKEKWKEACGYFVEMIERGFLPQKLT 464
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 128/320 (40%), Gaps = 53/320 (16%)
Query: 205 TMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
+ NL++D L + + ++ R + +E+ P TF I + R+ A T Q ++
Sbjct: 107 SFNLIIDILGRVRQFDVVRQLIVEMDQTSP---ETFLILV------KRLIAAGLTRQAVR 157
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
PC + R++ + LLD L K G +
Sbjct: 158 AFDDAPCFLEN--------RRFRLVEFGFLLDT-------------------LCKYGYTK 190
Query: 325 EAIRI-TEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNT 383
A+ + E+ + GS D + + LI + R+ A + VEM E+G+ P+ T+N
Sbjct: 191 MAVGVFNERKEEFGS--DEKVYTILIAGWCKLRRIDMAEK-FLVEMIESGIEPNVVTYNV 247
Query: 384 MITMFSHHG--HHEKAFH--------VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
++ H E+ F V +EM + +P+V +F +L + K +
Sbjct: 248 LLNGICRTASLHPEERFERNVRNAEKVFDEMRQ-RGIEPDVTSFSIVLHMYSRAHKAELT 306
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
L ++ ++ +S I TYT V+ LC + E A L + M+ I+P T
Sbjct: 307 LDKM--KLMKAKGISPTIETYTSVVKCLCSCGRLEEAEELLETMVESGISPSSATYNCFF 364
Query: 494 DEVKQKHMYDAAEKIEAVMK 513
E K + + A + MK
Sbjct: 365 KEYKGRKDANGAMNLYRKMK 384
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 101/229 (44%), Gaps = 9/229 (3%)
Query: 132 HSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTF 191
H E +E V KV D+MR +G + + + V+ +S A + E +
Sbjct: 259 HPEERFERNVRNAEKV--FDEMR------QRGIEPDVTSFSIVLHMYSRAHKAELTLDKM 310
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKI 250
+ G+ ET ++ LC G++E A + + +S I P++ T+N F +
Sbjct: 311 KLMKAKGISPTIETYTSVVKCLCSCGRLEEAEELLETMVESGISPSSATYNCFFKEYKGR 370
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
+ A ++MK C P +Y+ ++ ++ V E+ D+++A P++ +Y
Sbjct: 371 KDANGAMNLYRKMKNGLCKPSTQTYNVLLGTFINLGKMETVKEIWDDLKASETGPDLDSY 430
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
T+++ L ++EA +M G P F L L ++++++
Sbjct: 431 TSLVHGLCSKEKWKEACGYFVEMIERGFLPQKLTFETLYKGLIQSNKMR 479
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 42/230 (18%), Positives = 98/230 (42%), Gaps = 7/230 (3%)
Query: 108 HRFKDDWKSALGIF---RWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGH 164
RF+ + ++A +F R G P S + M +D+M+ + +KG
Sbjct: 262 ERFERNVRNAEKVFDEMRQRGIEPDVTSFSIVLHMYSRAHKAELTLDKMKLM---KAKGI 318
Query: 165 IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARS 224
T+ T V++ G+ E+A + + G+ ++ T N A +
Sbjct: 319 SPTIETYTSVVKCLCSCGRLEEAEELLETMVESGISPSSATYNCFFKEYKGRKDANGAMN 378
Query: 225 VFLELKSCI-PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYC 283
++ ++K+ + P+ T+N+ + + + +++ + ++K P + SY++++ C
Sbjct: 379 LYRKMKNGLCKPSTQTYNVLLGTFINLGKMETVKEIWDDLKASETGPDLDSYTSLVHGLC 438
Query: 284 RQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
+ + + EM +G P +T+ T+ L +S R+ +K+
Sbjct: 439 SKEKWKEACGYFVEMIERGFLPQKLTFETLYKGLIQSNKMRTWRRLKKKL 488
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 120/450 (26%), Positives = 224/450 (49%), Gaps = 18/450 (4%)
Query: 70 IISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWA--- 124
++ ++ V + +V ++ D + I P+ + ++ ++ SAL + R
Sbjct: 181 VVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKH 240
Query: 125 GSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQ 183
G P +S IY+ ++ L K ++++ LLEEM G + T V+ +
Sbjct: 241 GCVP----NSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDR 296
Query: 184 WEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIF 243
+A + + + G + T L++ LCK G+V+ A+ +F + P + FN
Sbjct: 297 INEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK---PTSVIFNTL 353
Query: 244 IHGWCKINRVDEAQWTIQEM-KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
IHG+ R+D+A+ + +M +G P V +Y+++I Y ++ E+L +M+ +G
Sbjct: 354 IHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKG 413
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
C PNV +YT ++ K G +EA + +M G KP++ FNCLI + R+ EAV
Sbjct: 414 CKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAV 473
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLK 422
+++ EMP G PD TFN++I+ + A +L +M E N T++ L+
Sbjct: 474 EIFR-EMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMIS-EGVVANTVTYNTLIN 531
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
+ + G+ E +L+++MV + L LD TY +I GLCRA + + A LF++M+ +
Sbjct: 532 AFLRRGEIKEA-RKLVNEMVFQGSL-LDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGL 589
Query: 483 TPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
P +C ++++ + + M + A + + M
Sbjct: 590 VPSSISCNILINGLCRSGMVEEAVEFQKEM 619
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 109/375 (29%), Positives = 184/375 (49%), Gaps = 10/375 (2%)
Query: 113 DWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTI- 171
D +++ +F W GS GY HS ++Y++++ LG + + LL +M IV ++
Sbjct: 84 DVSTSMELFSWTGSQKGYRHSFDVYQVLIGKLGSNGEFKTIDRLLMQMKDEGIVFKESLF 143
Query: 172 AKVMRRFSGAGQWEDAVRTFDEL-GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK 230
+MR + AG R E+ + E ++ N++L+ L ++A +VF ++
Sbjct: 144 ISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDML 203
Query: 231 S-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFS 289
S IPP TF + + C +N VD A +++M HGC P + Y T+I S + +
Sbjct: 204 SRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVN 263
Query: 290 KVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
+ +LL+EM GC P+ T+ V+ L K EA ++ +M I G PD + L+
Sbjct: 264 EALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLM 323
Query: 350 YTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH 409
L + RV A ++ +P+ P + FNT+I F HG + A VL +M
Sbjct: 324 NGLCKIGRVDAAKDLFY-RIPK----PTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYG 378
Query: 410 CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEW 469
P+V T++ L+ +K G L ++L DM NK ++ +YT+++ G C+ K +
Sbjct: 379 IVPDVCTYNSLIYGYWKKGLVGLAL-EVLRDMRNK-GCKPNVYSYTILVDGFCKLGKIDE 436
Query: 470 AYLLFKEMIGHDITP 484
AY L EM + P
Sbjct: 437 AYNLLNEMSADGLKP 451
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 101/421 (23%), Positives = 185/421 (43%), Gaps = 46/421 (10%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAV 188
G+ Y +++ L K+ ++D + L + K V NT+ + F G+ +DA
Sbjct: 311 GFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPTSVIFNTL---IHGFVTHGRLDDAK 367
Query: 189 RTFDELGT-FGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIH 245
++ T +G+ + T N L+ K+G V LA V ++ K C PN +++ I +
Sbjct: 368 AVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGC-KPNVYSYTILVD 426
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G+CK+ ++DEA + EM G P + ++ +I ++C+++ + E+ EM +GC P
Sbjct: 427 GFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKP 486
Query: 306 -----------------------------------NVVTYTTVMSYLAKSGDFEEAIRIT 330
N VTY T+++ + G+ +EA ++
Sbjct: 487 DVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLV 546
Query: 331 EKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSH 390
+M GS D +N LI L RA V +A +++ +M +G+ P + + N +I
Sbjct: 547 NEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFE-KMLRDGLVPSSISCNILINGLCR 605
Query: 391 HGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLD 450
G E+A +EM L P++ TF+ L+ + G+ ++ L+ + + D
Sbjct: 606 SGMVEEAVEFQKEM-VLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRK--LQAEGIPPD 662
Query: 451 ITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEA 510
TY ++ LC+ A LL E I P +T ++L + + D A
Sbjct: 663 TVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSLVPQETLDRRTFYNA 722
Query: 511 V 511
V
Sbjct: 723 V 723
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 141/276 (51%), Gaps = 6/276 (2%)
Query: 81 DEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWK--SALGIFRWAGSCPGYEHSSEIYE 138
DE + +L + + ++P+ N LI F + + A+ IFR G + +
Sbjct: 435 DEAY-NLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPR-KGCKPDVYTFN 492
Query: 139 MMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTF 197
++ L +V ++ LL +M S+G + T ++ F G+ ++A + +E+
Sbjct: 493 SLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQ 552
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEA 256
G + T N L+ LC+ G+V+ ARS+F + L+ + P++ + NI I+G C+ V+EA
Sbjct: 553 GSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEA 612
Query: 257 QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSY 316
+EM G P +++++++I CR + ++QA+G PP+ VTY T+MS+
Sbjct: 613 VEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSW 672
Query: 317 LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
L K G +A + ++ G P+ R ++ L+ +L
Sbjct: 673 LCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSL 708
>gi|449463418|ref|XP_004149431.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
gi|449499065|ref|XP_004160711.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
Length = 439
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/394 (25%), Positives = 189/394 (47%), Gaps = 5/394 (1%)
Query: 95 AIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMR 154
I+ S + ++ RF++ A F WA Y HS Y M++ L K+RQ +
Sbjct: 17 GIRISPEIAEPVLRRFENAGMLAYRFFEWASKQRNYVHSVRAYHSMIESLAKIRQYQMVW 76
Query: 155 ALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLC 214
L+ M I+ + +MR+++ A + E+AV TF+ + + ++ N N LL LC
Sbjct: 77 DLVNAMRNKEILNVEAFCIIMRKYARAQKVEEAVYTFNVMEKYNMKPNVAAFNGLLSALC 136
Query: 215 KEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVIS 274
K V A+ +F +K P++ T++I I GW + + +A+ +EM GC P ++
Sbjct: 137 KSKNVRKAQEIFDNMKDQFVPDSKTYSILIEGWGRAPNLPKAREIYREMIDSGCIPDEVT 196
Query: 275 YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
YS ++ C+ + E++ EM C P+ Y+ ++ E+A+ +M+
Sbjct: 197 YSIMVDVLCKAGRVDEAVEIVKEMDYNNCKPSSFIYSVLVHTYGVENRIEDAVSTFLEME 256
Query: 335 IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHH 394
G D +N LI +A++++ VY +M GV P++ T N +I G
Sbjct: 257 RNGVMADVAAYNALISAFCKANKMKN-VYRVLKDMDLKGVNPNSRTCNIIINSLIGRGET 315
Query: 395 EKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTY 454
++AF + M K+ C+P+V ++ ++K G+ + ++ + + K + T+
Sbjct: 316 DEAFKIFRRMIKV--CEPDVDSYTMIIK--MFCGRKELDMALKIWKYMKKKQFVPSMHTF 371
Query: 455 TLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+++I+GLC+ A +L +EMI I P T
Sbjct: 372 SVLINGLCQIGNATQACVLLEEMIEKGIRPSGAT 405
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 123/244 (50%), Gaps = 5/244 (2%)
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
V ++ I++ Y R + + M+ PNV + ++S L KS + +A I +
Sbjct: 90 VEAFCIIMRKYARAQKVEEAVYTFNVMEKYNMKPNVAAFNGLLSALCKSKNVRKAQEIFD 149
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHH 391
MK PDS+ ++ LI GRA + +A +Y+ EM ++G PD T++ M+ +
Sbjct: 150 NMKD-QFVPDSKTYSILIEGWGRAPNLPKAREIYR-EMIDSGCIPDEVTYSIMVDVLCKA 207
Query: 392 GHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDI 451
G ++A +++EM+ +CKP+ + L+ + + ++ +S L+ + ++ + D+
Sbjct: 208 GRVDEAVEIVKEMD-YNNCKPSSFIYSVLVHTYGVENRIEDAVSTFLE--MERNGVMADV 264
Query: 452 TTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAV 511
Y +I C+ANK + Y + K+M + P +TC +I++ + + D A KI
Sbjct: 265 AAYNALISAFCKANKMKNVYRVLKDMDLKGVNPNSRTCNIIINSLIGRGETDEAFKIFRR 324
Query: 512 MKKL 515
M K+
Sbjct: 325 MIKV 328
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 96/209 (45%), Gaps = 1/209 (0%)
Query: 133 SSEIYEMMVDILG-KVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTF 191
SS IY ++V G + R D + LE G + + ++ F A + ++ R
Sbjct: 228 SSFIYSVLVHTYGVENRIEDAVSTFLEMERNGVMADVAAYNALISAFCKANKMKNVYRVL 287
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKIN 251
++ G+ N+ T N+++++L G+ + A +F + P+ ++ + I +C
Sbjct: 288 KDMDLKGVNPNSRTCNIIINSLIGRGETDEAFKIFRRMIKVCEPDVDSYTMIIKMFCGRK 347
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
+D A + MK P + ++S +I C+ N ++ LL+EM +G P+ T+
Sbjct: 348 ELDMALKIWKYMKKKQFVPSMHTFSVLINGLCQIGNATQACVLLEEMIEKGIRPSGATFG 407
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
+ L K G + + EKM ++ +P
Sbjct: 408 RLRHLLIKEGRKDVLKFLQEKMNLLVKEP 436
>gi|115476116|ref|NP_001061654.1| Os08g0369200 [Oryza sativa Japonica Group]
gi|113623623|dbj|BAF23568.1| Os08g0369200 [Oryza sativa Japonica Group]
gi|125603197|gb|EAZ42522.1| hypothetical protein OsJ_27088 [Oryza sativa Japonica Group]
gi|215740653|dbj|BAG97309.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 511
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 179/381 (46%), Gaps = 15/381 (3%)
Query: 133 SSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
+++ Y+ +VD LG+ RQ D L+ E + T T A + RR+ AG AVR FD
Sbjct: 102 AADAYDAVVDALGRARQFDAAWRLVVEAAADGAATPRTFAVLARRYVAAGMTRQAVRAFD 161
Query: 193 ELGTF-GLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKIN 251
++ F G E + LLDTLCK ++A VF + K PN + + I+GWCK+N
Sbjct: 162 DMEAFVGREPDAAEFTTLLDTLCKYKYPKVAAEVFNKRKYKYEPNEKMYTVLIYGWCKVN 221
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCR------QYNFSKVY----ELLDEMQAQ 301
R D AQ +++M HG P +++Y+ ++ CR Y F + +LL EM +
Sbjct: 222 RNDMAQKFLKDMIYHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVRAAEDLLKEMHQR 281
Query: 302 GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
G PNV +Y+ ++ +++ E + + MK G P + +I L R+ +A
Sbjct: 282 GIEPNVTSYSVILHVYSRAHKPELCLCMFRSMKERGICPTVATYTSVIKCLASCGRLDDA 341
Query: 362 VYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKL-EHCKPNVQTFHPL 420
+ EM GV P +T+N + A + +M P++ T++ L
Sbjct: 342 ESLLD-EMASEGVCPSPATYNCFFKEYRGRKDVNGALQLYNKMKAPGSPATPDIHTYNIL 400
Query: 421 LKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH 480
L K + D + Q+ +DM + + D+ +YTL++HGLC K A F EMI
Sbjct: 401 LGMFIKLNQHDTVM-QVWNDMC-ESTVGPDLNSYTLLVHGLCDNKKWREACQFFMEMIER 458
Query: 481 DITPRYQTCRLILDEVKQKHM 501
P+ T + + Q M
Sbjct: 459 GFLPQKITFETLYRGLIQADM 479
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 94/230 (40%), Gaps = 15/230 (6%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDA 187
G E + Y +++ + + + + + M +G T+ T V++ + G+ +DA
Sbjct: 282 GIEPNVTSYSVILHVYSRAHKPELCLCMFRSMKERGICPTVATYTSVIKCLASCGRLDDA 341
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK---SCIPPNAHTFNIFI 244
DE+ + G+ + T N V A ++ ++K S P+ HT+NI +
Sbjct: 342 ESLLDEMASEGVCPSPATYNCFFKEYRGRKDVNGALQLYNKMKAPGSPATPDIHTYNILL 401
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
+ K+N+ D +M P + SY+ ++ C + + + EM +G
Sbjct: 402 GMFIKLNQHDTVMQVWNDMCESTVGPDLNSYTLLVHGLCDNKKWREACQFFMEMIERGFL 461
Query: 305 PNVVTYTTVMSYLAKSGDF-----------EEAIRITEKMKIVGSKPDSR 343
P +T+ T+ L ++ EEA + E+ K KP R
Sbjct: 462 PQKITFETLYRGLIQADMLRTWRRLKKRVDEEAAKFGEEFKPYHIKPYKR 511
>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
Length = 561
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 190/387 (49%), Gaps = 13/387 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ L K ++DQ LL+EM +G + V+R AG++ DA+ F +
Sbjct: 33 YGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVA 92
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS---CIPPNAHTFNIFIHGWCKINR 252
+ T N+L+D L K G+VE A +F + + C+P N T+ I+G CK +
Sbjct: 93 GTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLP-NVVTYTTVINGLCKDGK 151
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
+D A + M GC P VI+YS +++ C+ K + LL EM +G P+V+ Y T
Sbjct: 152 LDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNT 211
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN 372
+++ L KS +EA+ + + M G P +N L+ R+ +V A + QV M E
Sbjct: 212 LLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQV-MSER 270
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD- 431
G PD +NT+I + A +L++M C P+V T+ ++ K + D
Sbjct: 271 GCPPDVINYNTVIAGLCRDARLDDAQALLKQMVA-ARCVPDVITYSTIIDGLCKDWRVDA 329
Query: 432 ----ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
E ++L+ M+ + + TY +VI GLCRA K + A L + MI ++ P
Sbjct: 330 DWKLEAACEILE-MMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLS 388
Query: 488 TCRLILDEVKQKHMYDAAEKIEAVMKK 514
+ +++ + + H DAA KI +M +
Sbjct: 389 SFSMVIGSLCKSHDLDAAYKIFGMMSE 415
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/461 (24%), Positives = 213/461 (46%), Gaps = 29/461 (6%)
Query: 61 SPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWK----- 115
+P + ++++ + +E FQ + H + P+ +I+ D K
Sbjct: 97 TPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAI 156
Query: 116 SALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK----GHIVTLNTI 171
L + G CP + Y ++V+ L K + D+ LL+EM++ ++ NT+
Sbjct: 157 ELLDLMNETGCCP----NVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTL 212
Query: 172 AKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELA-RSVFLELK 230
+ + + ++A+ + G T N L++ C+ +V+ A R + + +
Sbjct: 213 ---LNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSE 269
Query: 231 SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQY---- 286
PP+ +N I G C+ R+D+AQ +++M C P VI+YSTII C+ +
Sbjct: 270 RGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDA 329
Query: 287 --NFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRF 344
E+L+ M+ GCPPN TY V+ L ++ ++A+ + +M PD
Sbjct: 330 DWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSS 389
Query: 345 FNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
F+ +I +L ++ + A ++ + M E P+ + +I S G +KA V E M
Sbjct: 390 FSMVIGSLCKSHDLDAAYKIFGM-MSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELM 448
Query: 405 NKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRA 464
+E +P V T++ +L G+ +E + ++++ M++K D +Y +I GLCR
Sbjct: 449 --VESFRPGVATYNSVLDGLCGVGRIEEAV-RMVEGMIHKECFP-DGASYGALIRGLCRV 504
Query: 465 NKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDA 504
+ E AY LF+ + ++++E+ K+K + DA
Sbjct: 505 SCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDA 545
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 158/337 (46%), Gaps = 9/337 (2%)
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHT 239
AGQ AV+ F E N T L+ LCK GK++ A + E++ IPP
Sbjct: 11 AGQHGQAVQLFREERCV---PNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAV 67
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
N I G CK R +A + + G C P +I+++ ++ + + + +++ + M
Sbjct: 68 HNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMH 127
Query: 300 AQG-CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRV 358
C PNVVTYTTV++ L K G + AI + + M G P+ ++ L+ L +A R
Sbjct: 128 TSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRT 187
Query: 359 QEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFH 418
+ + Q EM G PD +NT++ ++A +++ M + C P V T++
Sbjct: 188 DKGFTLLQ-EMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIR-SGCYPTVVTYN 245
Query: 419 PLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
L++ ++ + D L ++++ D+ Y VI GLCR + + A L K+M+
Sbjct: 246 SLMELFCRSKQVDRAFR--LIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMV 303
Query: 479 GHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
P T I+D + + DA K+EA + L
Sbjct: 304 AARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEIL 340
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 131/270 (48%), Gaps = 6/270 (2%)
Query: 248 CKIN---RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
C +N R + +Q + C P +Y ++I C+ + YELLDEM+ +G P
Sbjct: 3 CALNLLVRAGQHGQAVQLFREERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIP 62
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
P V + V+ L K+G F +A+ + + PD FN L+ L ++ RV+EA +
Sbjct: 63 PGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQI 122
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
++ + P+ T+ T+I G ++A +L+ MN+ C PNV T+ L++
Sbjct: 123 FESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNE-TGCCPNVITYSVLVEGL 181
Query: 425 FKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
K G+TD+ + LL +M + D+ Y +++GLC++ + + A L + MI P
Sbjct: 182 CKAGRTDKGFT-LLQEM-TRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYP 239
Query: 485 RYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
T +++ + D A ++ VM +
Sbjct: 240 TVVTYNSLMELFCRSKQVDRAFRLIQVMSE 269
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 103/237 (43%), Gaps = 10/237 (4%)
Query: 109 RFKDDWK-----SALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKG 163
R DWK L + + G CP ++ Y ++++ L + R+ Q ALL M
Sbjct: 326 RVDADWKLEAACEILEMMKQTG-CP---PNAGTYAVVIEGLCRARKSQQALALLRRMIDS 381
Query: 164 HIVT-LNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELA 222
+V L++ + V+ + + A + F + + N L+D L K G+V+ A
Sbjct: 382 EVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKA 441
Query: 223 RSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSY 282
VF + P T+N + G C + R++EA ++ M C P SY +I+
Sbjct: 442 VRVFELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGL 501
Query: 283 CRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
CR + YEL ++A+G V Y +++ L K +A + K+ G K
Sbjct: 502 CRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGYK 558
>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
Length = 702
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 118/407 (28%), Positives = 195/407 (47%), Gaps = 45/407 (11%)
Query: 112 DDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQM-RALLEEMSKGHIVTLNT 170
+D A F+WAG+ PG++H++ ++++ K ++ ++ R L EE+
Sbjct: 54 EDPDVAWTFFQWAGNKPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIM 113
Query: 171 IAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK 230
V+ F AGQ + A DE+ G++ + + L+ LC++G+++ A F +
Sbjct: 114 YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG 173
Query: 231 SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK-----GHGCHPCVISYSTIIQSYCRQ 285
PN T+N ++G CK NR+DEA +M+ HGC P VISYST+I + C+
Sbjct: 174 EECSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKA 233
Query: 286 YNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSG----------------------DF 323
K YE M+A GC PNVVTY++++ L K DF
Sbjct: 234 QRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDF 293
Query: 324 -------------EEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
E+A + E++ G KP+ +N ++ L +A RV EA Y +EM
Sbjct: 294 NAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEA-YRILLEMV 352
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKT 430
E+ V PD T++++I F G +KA V M + C P+ TF LL + K+
Sbjct: 353 ESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRM-MVHECIPHPVTFMTLLHGFSEHKKS 411
Query: 431 DECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
E ++ +DMVN + + TY +++ +C A+ E A ++ +M
Sbjct: 412 REAF-RVHEDMVNAGFIP-GLQTYNVLMDCVCGADSVESALEIYHKM 456
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 127/524 (24%), Positives = 219/524 (41%), Gaps = 63/524 (12%)
Query: 24 RFHSSSENCS-HIVSSSPIESYCSDGARLDHHQVLCVDSPRLPDIDVIISKVHVGSSEDE 82
+F S E CS ++++ + + + R+D L D++ H G D
Sbjct: 168 QFKSMGEECSPNVITYNTVVNGLCKANRIDEALEL------FDDMEKRYEASH-GCEPDV 220
Query: 83 VFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVD 142
+ S D +C A + V+K FK R G P + Y ++D
Sbjct: 221 ISYSTVIDALCKAQR-----VDKAYEYFKR--------MRAVGCAP----NVVTYSSLID 263
Query: 143 ILGKV-RQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEK 201
L KV R + + LL KG + + ++ + E A + F+ L G +
Sbjct: 264 GLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKP 323
Query: 202 NTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTI 260
N T N+ + LCK G+V+ A + LE+ +S + P+ T++ I G+CK R+D+A
Sbjct: 324 NVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVF 383
Query: 261 QEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKS 320
M H C P +++ T++ + + + + ++M G P + TY +M + +
Sbjct: 384 TRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGA 443
Query: 321 GDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTST 380
E A+ I KMK +PD + LI L RA RV EA V M + V P+ +
Sbjct: 444 DSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDV-MEADNVVPNGAI 502
Query: 381 FNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF--------------- 425
+ ++ + G ++A VL+ + ++ C+P +TF L++ +
Sbjct: 503 CHALVEVLCKQGEVDEACSVLDNVVEV-GCQPLGETFKILVEELYLRKKWEAASKLLRSP 561
Query: 426 -----------------KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
K GK DE + ++++ MV K + D TY V+ LC ++ E
Sbjct: 562 GFVADAATYSLCVAEICKAGKPDEAV-EVIEQMVLKG-VRPDEGTYVAVLRSLCGLDRVE 619
Query: 469 WAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
A F++M P T L++ E M D A +I M
Sbjct: 620 SAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAM 663
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 150/327 (45%), Gaps = 44/327 (13%)
Query: 198 GLEKNTETMNLLLDTLCKEGKVELA-RSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEA 256
G + N T +LL+ K + E A R + EL+ PN + I+G+CK +VD+A
Sbjct: 71 GFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQA 130
Query: 257 QWTIQEMKGHG----------------------------------CHPCVISYSTIIQSY 282
+ EMK G C P VI+Y+T++
Sbjct: 131 FELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEECSPNVITYNTVVNGL 190
Query: 283 CRQYNFSKVYELLDEMQ-----AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
C+ + EL D+M+ + GC P+V++Y+TV+ L K+ ++A ++M+ VG
Sbjct: 191 CKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVG 250
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKA 397
P+ ++ LI L + R E + + + M E G + FN M+ + EKA
Sbjct: 251 CAPNVVTYSSLIDGLCKVDRPSECLELL-LHMKEKGFGINIIDFNAMLHALWKNDEQEKA 309
Query: 398 FHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLV 457
E + K KPNV T++ + K G+ DE LL+ + +K ++ D+ TY+ +
Sbjct: 310 CQFFERLLKSGK-KPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESK--VTPDVITYSSI 366
Query: 458 IHGLCRANKCEWAYLLFKEMIGHDITP 484
I G C+A + + A +F M+ H+ P
Sbjct: 367 IDGFCKAGRMDKADDVFTRMMVHECIP 393
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 145/313 (46%), Gaps = 45/313 (14%)
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
NA+T + ++ + K R +EA ++E C P I Y+T+I +C+ + +ELL
Sbjct: 75 NAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQAFELL 134
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK--PDSRFFNCLIYTLG 353
DEM+ +G +V+ ++T++ L + G +EA+ E+ K +G + P+ +N ++ L
Sbjct: 135 DEMKERGVKMDVLLHSTLIQGLCRKGRIDEAL---EQFKSMGEECSPNVITYNTVVNGLC 191
Query: 354 RASRVQEAVYVYQVEMPEN-----GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
+A+R+ EA+ ++ +M + G PD +++T+I +KA+ + M +
Sbjct: 192 KANRIDEALELFD-DMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAV- 249
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLD----------------------------- 439
C PNV T+ L+ K + ECL LL
Sbjct: 250 GCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKA 309
Query: 440 ----DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE 495
+ + K ++ TY + +HGLC+A + + AY + EM+ +TP T I+D
Sbjct: 310 CQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDG 369
Query: 496 VKQKHMYDAAEKI 508
+ D A+ +
Sbjct: 370 FCKAGRMDKADDV 382
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 113/444 (25%), Positives = 192/444 (43%), Gaps = 51/444 (11%)
Query: 82 EVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIF-----RWAGSCPGYEHSSEI 136
E F+S+ ++ N I + +VN L + D AL +F R+ S G E
Sbjct: 167 EQFKSMGEECSPNVIT-YNTVVNGLCKANRID--EALELFDDMEKRYEAS-HGCEPDVIS 222
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK----GHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++D L K +++D+ + M ++VT +++ + + + + +
Sbjct: 223 YSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMK 282
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKIN 251
E G FG+ N N +L L K + E A F L KS PN T+N+ +HG CK
Sbjct: 283 EKG-FGI--NIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAG 339
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
RVDEA + EM P VI+YS+II +C+ K ++ M C P+ VT+
Sbjct: 340 RVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFM 399
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
T++ ++ EA R+ E M G P + +N L+ + A V+ A+ +Y +M
Sbjct: 400 TLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYH-KMKR 458
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
PD +T+ +I ++A L+ M + ++ PN H L++ K G+ D
Sbjct: 459 KKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVM-EADNVVPNGAICHALVEVLCKQGEVD 517
Query: 432 ECLSQLLDDMVNKHHLSL-------------------------------DITTYTLVIHG 460
E S +LD++V L D TY+L +
Sbjct: 518 EACS-VLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLLRSPGFVADAATYSLCVAE 576
Query: 461 LCRANKCEWAYLLFKEMIGHDITP 484
+C+A K + A + ++M+ + P
Sbjct: 577 ICKAGKPDEAVEVIEQMVLKGVRP 600
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 134/327 (40%), Gaps = 43/327 (13%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM----SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++D K +MD+ + M H VT T+ + FS + +A R +
Sbjct: 363 YSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTL---LHGFSEHKKSREAFRVHE 419
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKIN 251
++ G +T N+L+D +C VE A ++ ++K P+ +T+ I C+
Sbjct: 420 DMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRAR 479
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP------ 305
RVDEA+ + M+ P +++ C+Q + +LD + GC P
Sbjct: 480 RVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFK 539
Query: 306 --------------------------NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
+ TY+ ++ + K+G +EA+ + E+M + G +
Sbjct: 540 ILVEELYLRKKWEAASKLLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVR 599
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
PD + ++ +L RV+ A+ ++ +M G AP T+ +I ++AF
Sbjct: 600 PDEGTYVAVLRSLCGLDRVESAIAEFE-KMASRGCAPGLVTYTLLIGEACSADMADEAFR 658
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFK 426
+ E M P QT L SC +
Sbjct: 659 IFEAMVAAGF-TPQAQTMRT-LSSCLR 683
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 103/238 (43%), Gaps = 15/238 (6%)
Query: 88 KQDHVCNAIQPSHYLVNKLIH-RFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGK 146
K+ CN P L+ L R D+ K L + P + I +V++L K
Sbjct: 460 KRQPDCNTYAP---LIQCLCRARRVDEAKEFLDVMEADNVVP----NGAICHALVEVLCK 512
Query: 147 VRQMDQMRALLEEMSKGHIVTLNTIAKVM-RRFSGAGQWEDAVRTFDELGTFGLEKNTET 205
++D+ ++L+ + + L K++ +WE A + L + G + T
Sbjct: 513 QGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKL---LRSPGFVADAAT 569
Query: 206 MNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
+L + +CK GK + A V + LK + P+ T+ + C ++RV+ A ++M
Sbjct: 570 YSLCVAEICKAGKPDEAVEVIEQMVLKG-VRPDEGTYVAVLRSLCGLDRVESAIAEFEKM 628
Query: 264 KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSG 321
GC P +++Y+ +I C + + + + M A G P T T+ S L +G
Sbjct: 629 ASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAG 686
>gi|294461967|gb|ADE76539.1| unknown [Picea sitchensis]
Length = 486
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 109/375 (29%), Positives = 189/375 (50%), Gaps = 7/375 (1%)
Query: 103 VNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK 162
V+KLI + D A+ IF A PG++HS Y ++ LG+ RQ M L+++M K
Sbjct: 103 VHKLIAS-QTDALLAMEIFEVASRQPGFKHSYSTYHTLICKLGRARQFKTMEGLIQQMRK 161
Query: 163 -GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVEL 221
G T ++ + G +A++ F ++ FG E + N+LL L + +E
Sbjct: 162 DGCPYTPGLFVDIIEIYGEVGMPNEAIKAFHQMLEFGYEPLAKHFNVLLIVLIEHKCLET 221
Query: 222 ARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQ 280
A S+F +L + I PN T+NI I C +++ A + +M GC P V +YS ++Q
Sbjct: 222 ALSLFKKLHEFGISPNTRTYNILIRAHCHSDKLSHAYFLFNKMHKQGCIPDVETYSILMQ 281
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
CR+ +LDEM +G P+ +TY T+++ L + + EA R+ KMK++G P
Sbjct: 282 GLCRKSQVKTALGVLDEMLNKGYVPDALTYNTLLNSLCRKMNLREAYRLLSKMKVMGCNP 341
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
D +N +I R R +A + + +MPENG P+ ++ T++ + G ++A
Sbjct: 342 DVINYNTVITGFCREGRALDACQILR-DMPENGCLPNALSYRTLVNGLCNEGKFDEAKDF 400
Query: 401 LEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHG 460
+EEM P++ +H L+ GK E L+ M+ K L+ +T+++++
Sbjct: 401 VEEMIS-NGFIPHISIYHLLITGLCNEGKVGEACEVLV--MMTKQTLAPHESTWSVLLMR 457
Query: 461 LCRANKCEWAYLLFK 475
+C ++ E L+ K
Sbjct: 458 ICEDSQTEARELVDK 472
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 118/286 (41%), Gaps = 6/286 (2%)
Query: 230 KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFS 289
K P F I + ++ +EA +M G P ++ ++
Sbjct: 161 KDGCPYTPGLFVDIIEIYGEVGMPNEAIKAFHQMLEFGYEPLAKHFNVLLIVLIEHKCLE 220
Query: 290 KVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
L ++ G PN TY ++ S A + KM G PD ++ L+
Sbjct: 221 TALSLFKKLHEFGISPNTRTYNILIRAHCHSDKLSHAYFLFNKMHKQGCIPDVETYSILM 280
Query: 350 YTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH 409
L R S+V+ A+ V EM G PD T+NT++ + +A+ +L +M K+
Sbjct: 281 QGLCRKSQVKTALGVLD-EMLNKGYVPDALTYNTLLNSLCRKMNLREAYRLLSKM-KVMG 338
Query: 410 CKPNVQTFHPLLKSCFKTGKT-DECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
C P+V ++ ++ + G+ D C Q+L DM L + +Y +++GLC K +
Sbjct: 339 CNPDVINYNTVITGFCREGRALDAC--QILRDMPENGCLP-NALSYRTLVNGLCNEGKFD 395
Query: 469 WAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
A +EMI + P L++ + + A ++ +M K
Sbjct: 396 EAKDFVEEMISNGFIPHISIYHLLITGLCNEGKVGEACEVLVMMTK 441
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 103/240 (42%), Gaps = 39/240 (16%)
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
+Y T+I R F + L+ +M+ GCP + ++ + G EAI+ +M
Sbjct: 135 TYHTLICKLGRARQFKTMEGLIQQMRKDGCPYTPGLFVDIIEIYGEVGMPNEAIKAFHQM 194
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
G +P ++ FN L+ L ++ A+ +++ ++ E G++P+T T+N +I H
Sbjct: 195 LEFGYEPLAKHFNVLLIVLIEHKCLETALSLFK-KLHEFGISPNTRTYNILIRAHCHSDK 253
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
A+ + +M+K + C P D+ T
Sbjct: 254 LSHAYFLFNKMHK-QGCIP-------------------------------------DVET 275
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
Y++++ GLCR ++ + A + EM+ P T +L+ + +K A ++ + MK
Sbjct: 276 YSILMQGLCRKSQVKTALGVLDEMLNKGYVPDALTYNTLLNSLCRKMNLREAYRLLSKMK 335
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 128/509 (25%), Positives = 223/509 (43%), Gaps = 79/509 (15%)
Query: 78 SSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHS---- 133
SSED S + + PS +V +++ + DD A+ F W PGY+HS
Sbjct: 79 SSEDFELASRRLCEFGGYLVPS--VVGRVLQQL-DDLDKAVKFFDWCTGQPGYKHSKFTC 135
Query: 134 -------------------------------SEIYEMMVDILGKVRQMDQMRALLEEMSK 162
S Y +++ K R Q LL+EM K
Sbjct: 136 NCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 195
Query: 163 GHIVTLNTIAK-VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVEL 221
IV N + +++ G+ + A+ + ++ + T +L+D LCK ++
Sbjct: 196 RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQR-NCAPSVITYTILVDALCKSARISD 254
Query: 222 ARSVFLE--LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
A S+ LE +++ PN T+N I+G+CK+ +DEA +M + C P V +Y+ +I
Sbjct: 255 A-SLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILI 313
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
YC+Q +LL EM GC PN +TY T+M L KSG + +A + + M K
Sbjct: 314 DGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCK 373
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
P FN +I + ++ A ++Q+ M + G PD T+N MI+ + A
Sbjct: 374 PSHFTFNLMIDMFCKVGQLDLAYELFQL-MTDRGCLPDIYTYNIMISGACRANRIDDARQ 432
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE--------------------------- 432
+LE M + C P+V T++ ++ K + DE
Sbjct: 433 LLERMTE-AGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGL 491
Query: 433 CLSQLLDDM------VNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
C S+ LDD + ++ + D+ YT++IHG C+A++ + + F EM+ P
Sbjct: 492 CKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTV 551
Query: 487 QTCRLILDEV-KQKHMYDAAEKIEAVMKK 514
T +++D++ K + D ++ ++++
Sbjct: 552 ITYSIVIDKLCKSARVRDGCMLLKTMLER 580
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 110/406 (27%), Positives = 187/406 (46%), Gaps = 19/406 (4%)
Query: 41 IESYCS-----DGARLDHHQVLCVDSPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNA 95
I+ YC DGA+L V P + ++ + + F +L Q +
Sbjct: 313 IDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAF-NLAQMMLRRD 371
Query: 96 IQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQM 153
+PSH+ N +I F A +F+ G Y +M+ + ++D
Sbjct: 372 CKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTD-RGCLPDIYTYNIMISGACRANRIDDA 430
Query: 154 RALLEEMSKG----HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLL 209
R LLE M++ +VT N+I + + A Q ++A ++ L G + T + L
Sbjct: 431 RQLLERMTEAGCPPDVVTYNSIVSGLCK---ASQVDEAYEVYEVLRNGGYFLDVVTCSTL 487
Query: 210 LDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGC 268
+D LCK +++ A + E+ ++ P+ + I IHG+CK +++D++ EM GC
Sbjct: 488 IDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGC 547
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
P VI+YS +I C+ LL M +G P+ + YT+V+ L KS ++EA
Sbjct: 548 VPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYE 607
Query: 329 ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF 388
+ + MK G P +N L+ L + SR+ EA+++ +V M +G PDT T+N++ F
Sbjct: 608 LYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEV-MESDGCLPDTVTYNSVFDGF 666
Query: 389 SHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
H+KAF + + M K C P + LL K D+ +
Sbjct: 667 WKSAEHDKAFRLFQAM-KSRGCSPTPFMYSLLLTKLVAEEKMDQAM 711
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 184/383 (48%), Gaps = 14/383 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGH----IVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y +++ K+ MD+ L +M + + T N + + + + +D +
Sbjct: 274 YNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNIL---IDGYCKQERPQDGAKLLQ 330
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGK-VELARSVFLELKSCIPPNAHTFNIFIHGWCKIN 251
E+ +G E N T N L+D+L K GK ++ + L+ P+ TFN+ I +CK+
Sbjct: 331 EMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVG 390
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
++D A Q M GC P + +Y+ +I CR +LL+ M GCPP+VVTY
Sbjct: 391 QLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYN 450
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
+++S L K+ +EA + E ++ G D + LI L ++ R+ +A + + EM
Sbjct: 451 SIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLR-EMER 509
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKT- 430
NG APD + +I F +K+ EM + C P V T+ ++ K+ +
Sbjct: 510 NGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLD-KGCVPTVITYSIVIDKLCKSARVR 568
Query: 431 DECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCR 490
D C+ LL M+ + ++ D YT VI GLC+++ + AY L+K M P T
Sbjct: 569 DGCM--LLKTMLERG-VTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYN 625
Query: 491 LILDEVKQKHMYDAAEKIEAVMK 513
+++D++ + D A + VM+
Sbjct: 626 VLVDKLCKVSRLDEAIHLLEVME 648
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 102/413 (24%), Positives = 189/413 (45%), Gaps = 49/413 (11%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK----GHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y +++D K + LL+EM K + +T NT+ M +G++ DA
Sbjct: 309 YNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTL---MDSLVKSGKYIDAFNLAQ 365
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKI 250
+ + + T NL++D CK G+++LA +F + + C+P + +T+NI I G C+
Sbjct: 366 MMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLP-DIYTYNIMISGACRA 424
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE----------------- 293
NR+D+A+ ++ M GC P V++Y++I+ C+ + YE
Sbjct: 425 NRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTC 484
Query: 294 ------------------LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKI 335
LL EM+ G P+VV YT ++ K+ ++++ +M
Sbjct: 485 STLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLD 544
Query: 336 VGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHE 395
G P ++ +I L +++RV++ + + M E GV PD + ++I ++
Sbjct: 545 KGCVPTVITYSIVIDKLCKSARVRDGCMLLKT-MLERGVTPDAIVYTSVIDGLCKSDSYD 603
Query: 396 KAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYT 455
+A+ + + M K C P V T++ L+ K + DE + LL+ M + L D TY
Sbjct: 604 EAYELYKLM-KQTGCAPTVVTYNVLVDKLCKVSRLDEAI-HLLEVMESDGCLP-DTVTYN 660
Query: 456 LVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
V G ++ + + A+ LF+ M +P L+L ++ + D A +I
Sbjct: 661 SVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEI 713
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 121/250 (48%), Gaps = 9/250 (3%)
Query: 140 MVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
++D L K R++D LL EM + G + ++ F A Q + ++ F E+ G
Sbjct: 487 LIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKG 546
Query: 199 LEKNTETMNLLLDTLCKEGKVE----LARSVFLELKSCIPPNAHTFNIFIHGWCKINRVD 254
T ++++D LCK +V L +++ L+ + P+A + I G CK + D
Sbjct: 547 CVPTVITYSIVIDKLCKSARVRDGCMLLKTM---LERGVTPDAIVYTSVIDGLCKSDSYD 603
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA + MK GC P V++Y+ ++ C+ + LL+ M++ GC P+ VTY +V
Sbjct: 604 EAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVF 663
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
KS + ++A R+ + MK G P ++ L+ L ++ +A+ +++ E E G
Sbjct: 664 DGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWE-EALEAGA 722
Query: 375 APDTSTFNTM 384
D T+
Sbjct: 723 DVDPEISRTL 732
>gi|224123678|ref|XP_002319139.1| predicted protein [Populus trichocarpa]
gi|222857515|gb|EEE95062.1| predicted protein [Populus trichocarpa]
Length = 518
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 198/395 (50%), Gaps = 12/395 (3%)
Query: 95 AIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMR 154
I+ S LV +++ R ++DW++A F WA PGY HS Y M+ ILGK+R+ D
Sbjct: 50 GIKVSQELVLEVLSRVRNDWEAAFTFFLWAARQPGYAHSVREYHSMISILGKMRKFDTAW 109
Query: 155 ALLEEM----SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLL 210
L++EM + +VT T+ ++R++ A+ TF F + E LL
Sbjct: 110 VLIDEMRGVKTGVSLVTPQTLLIMIRKYCAVHDVGRAINTFYAYKRFKFDMGIEEFQSLL 169
Query: 211 DTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCK-INRVDEAQWTIQEMKGHGCH 269
LC+ V+ A + K+ P N +FNI ++GWC I E++ +EM G
Sbjct: 170 SALCRYKNVQDAEQLMYCNKAVFPLNTKSFNIVLNGWCNLIGSPRESERVWREMSKRGIR 229
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI 329
V+SY++++ Y + + +V L +M+ G P+ Y V+ LAK EA +
Sbjct: 230 FDVVSYASMMSCYSKAGSLYRVLRLYKQMKKIGIEPDRKVYNAVIHALAKGRLVNEAFNL 289
Query: 330 TEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFS 389
+ M+ G P+ +N LI L RA +V+EA + +M + ++P T++ + +
Sbjct: 290 MKTMEEKGVAPNIVTYNSLIKPLCRARKVEEAKGAFD-DMLKRCISPTIRTYHAFLRILR 348
Query: 390 HHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSL 449
E+ F +LE+M K+ C+P T+ L++ F + E + +L D+M +++ +S
Sbjct: 349 ---TGEEVFALLEKMRKM-GCQPINDTYIMLIRK-FCRWRQLENVFKLWDEM-SENGISP 402
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
D ++Y ++IHGL + + A+ + EM + P
Sbjct: 403 DRSSYIVLIHGLFLNGELDAAHKYYTEMKEKQLLP 437
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 143/320 (44%), Gaps = 22/320 (6%)
Query: 205 TMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHT---FNIFIHGWCKINRVDEAQWTIQ 261
+ L+L+ L + A F + P AH+ ++ I K+ + D A I
Sbjct: 54 SQELVLEVLSRVRNDWEAAFTFFLWAARQPGYAHSVREYHSMISILGKMRKFDTAWVLID 113
Query: 262 EMKGHGCHPCVISYSTI---IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLA 318
EM+G +++ T+ I+ YC ++ + + + + +++S L
Sbjct: 114 EMRGVKTGVSLVTPQTLLIMIRKYCAVHDVGRAINTFYAYKRFKFDMGIEEFQSLLSALC 173
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRFFNCLIY---TLGRASRVQEAVYVYQVEMPENGVA 375
+ + ++A ++ K V +++ FN ++ L + R E V+ EM + G+
Sbjct: 174 RYKNVQDAEQLMYCNKAVFP-LNTKSFNIVLNGWCNLIGSPRESERVWR---EMSKRGIR 229
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS 435
D ++ +M++ +S G + + ++M K+ +P+ + ++ ++ + K +E +
Sbjct: 230 FDVVSYASMMSCYSKAGSLYRVLRLYKQMKKI-GIEPDRKVYNAVIHALAKGRLVNEAFN 288
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE 495
L+ M K ++ +I TY +I LCRA K E A F +M+ I+P +T L
Sbjct: 289 -LMKTMEEKG-VAPNIVTYNSLIKPLCRARKVEEAKGAFDDMLKRCISPTIRTYHAFL-- 344
Query: 496 VKQKHMYDAAEKIEAVMKKL 515
+ E++ A+++K+
Sbjct: 345 ----RILRTGEEVFALLEKM 360
>gi|255576901|ref|XP_002529336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531207|gb|EEF33053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 610
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 117/393 (29%), Positives = 198/393 (50%), Gaps = 15/393 (3%)
Query: 109 RFKDDWKSALGIFRWAGSCPG---YEHSSEIYEMMVDILGKVRQMDQM-RALLEEMSKGH 164
R ++D K AL +F+ S P + +S Y++M+ LG+ + +M + LL+ ++
Sbjct: 19 RLQEDPKLALHLFQHPNSNPNPKPFRYSLLCYDLMITKLGRAKMFHEMEQILLQFKTQTR 78
Query: 165 IVTLNTI-AKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTL--CKEGKVEL 221
+V + ++ + AG ++A++ FDE+ + ++ ++ N LL+ L CKE ++
Sbjct: 79 LVAKEPLFCNIITFYGRAGLPQNALKMFDEMPLYRCQRTIKSYNTLLNVLMICKE--FDV 136
Query: 222 ARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQS 281
R F+ +K + P+ TFNI I G C RVD+A + EMK P +++ T+I
Sbjct: 137 MREHFVNIKRHVKPDGCTFNIMIRGLCSDGRVDDALKVLDEMKNRDLVPNQVTFGTLIYG 196
Query: 282 YCRQYNFSKVYELLDEM-QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
C + ++L D M G PN Y T++ L G+ A+R+ E+M+ G K
Sbjct: 197 LCLNLKLKEAFKLKDYMVNVHGLCPNEYVYATLIKGLCAVGELSFALRLKEEMERDGVKV 256
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
DS ++ LI L + R E V+ +EM G DT T+N MI F E A+ +
Sbjct: 257 DSAIYSTLISGLFKVGRKDE-VFGVLMEMELKGCKADTVTYNVMINGFCKDKDFETAYKI 315
Query: 401 LEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHG 460
L+EM + CKP+V +++ +L K GK E S L +DM + + D+ +Y +V G
Sbjct: 316 LDEMME-NRCKPDVISYNVILGELCKDGKWSEA-SDLFEDM-PRRGCAPDVVSYRIVFDG 372
Query: 461 LCRANKCEWAYLLFKEMIGHDITPRYQT-CRLI 492
L A + + A + EM+ PR + C+ I
Sbjct: 373 LSDAMEFKDAAFILDEMVFKGFAPRSSSICKFI 405
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 2/211 (0%)
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEA 256
GL N L+ LC G++ A + E+ + + ++ ++ I G K+ R DE
Sbjct: 218 GLCPNEYVYATLIKGLCAVGELSFALRLKEEMERDGVKVDSAIYSTLISGLFKVGRKDEV 277
Query: 257 QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSY 316
+ EM+ GC ++Y+ +I +C+ +F Y++LDEM C P+V++Y ++
Sbjct: 278 FGVLMEMELKGCKADTVTYNVMINGFCKDKDFETAYKILDEMMENRCKPDVISYNVILGE 337
Query: 317 LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
L K G + EA + E M G PD + + L A ++A ++ EM G AP
Sbjct: 338 LCKDGKWSEASDLFEDMPRRGCAPDVVSYRIVFDGLSDAMEFKDAAFILD-EMVFKGFAP 396
Query: 377 DTSTFNTMITMFSHHGHHEKAFHVLEEMNKL 407
+S+ I +G + + VL + K+
Sbjct: 397 RSSSICKFINRLCQNGDEDLVWSVLNCLGKI 427
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 109/239 (45%), Gaps = 12/239 (5%)
Query: 262 EMKGHGCHPCVISYSTIIQSY--CRQYNFSK--VYELLDEMQAQGCPPNVVTYTTVMSYL 317
EM + C + SY+T++ C++++ + + ++ GC T+ ++ L
Sbjct: 108 EMPLYRCQRTIKSYNTLLNVLMICKEFDVMREHFVNIKRHVKPDGC-----TFNIMIRGL 162
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
G ++A+++ ++MK P+ F LIY L +++EA + + +G+ P+
Sbjct: 163 CSDGRVDDALKVLDEMKNRDLVPNQVTFGTLIYGLCLNLKLKEAFKLKDYMVNVHGLCPN 222
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
+ T+I G A + EEM + + K + + L+ FK G+ DE L
Sbjct: 223 EYVYATLIKGLCAVGELSFALRLKEEMER-DGVKVDSAIYSTLISGLFKVGRKDEVFGVL 281
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV 496
++ + D TY ++I+G C+ E AY + EM+ + P + +IL E+
Sbjct: 282 ME--MELKGCKADTVTYNVMINGFCKDKDFETAYKILDEMMENRCKPDVISYNVILGEL 338
>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 665
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 113/412 (27%), Positives = 195/412 (47%), Gaps = 36/412 (8%)
Query: 109 RFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVT 167
R + D A FR + ++H+ Y++M++ LG+ +D ++ LL++M +G +
Sbjct: 54 RTETDIVLASNYFRSIANSKAFQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCS 113
Query: 168 LNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFL 227
+ V+ + G E A++ F + FG + + N LLD + E + ++ ++
Sbjct: 114 EDLFINVINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYS 173
Query: 228 ELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQS----- 281
+K PN +T+NI + CK NRVD A + EM GC P V+SY+T+I S
Sbjct: 174 NMKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLG 233
Query: 282 -------------------------YCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSY 316
+CR+Y +V+ LL +M +G PNV+TY+TV+S
Sbjct: 234 KVEEARELSIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISS 293
Query: 317 LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
L+ G+ E A+ + KM + G P+ F L+ RV EA+ ++ M E G P
Sbjct: 294 LSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWN-RMAEEGFEP 352
Query: 377 DTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQ 436
+ +NT+I HG +A V +M + C PNV T+ L+ K G S+
Sbjct: 353 NVVAYNTLIHGLCSHGKMGEAVSVSSKMER-NGCSPNVSTYGALIDGFAKAGDLVGA-SE 410
Query: 437 LLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ + M+ + ++ YT +++ LCR++ A+ L ++M + P T
Sbjct: 411 IWNKMMTNGCIP-NVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVT 461
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 111/423 (26%), Positives = 200/423 (47%), Gaps = 13/423 (3%)
Query: 65 PDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWA 124
PD+ +S V SS ++ + + + QP+ + N LI+ F ++K +F
Sbjct: 217 PDV---VSYTTVISSMSKLGKVEEARELSIRFQPNVSVYNALINGFCREYKVK-EVFLLL 272
Query: 125 GSC--PGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGA 181
G G + + Y ++ L + ++ A+ +M +G + T +M+ +
Sbjct: 273 GQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMR 332
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHT 239
G+ +A+ ++ + G E N N L+ LC GK+ A SV +E C PN T
Sbjct: 333 GRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGC-SPNVST 391
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+ I G+ K + A +M +GC P V+ Y++++ CR FS+ + L+++M
Sbjct: 392 YGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMS 451
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
CPPN VT+ T + L SG E AI + +M+ G P+ + +N ++ L + +R++
Sbjct: 452 TDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIK 511
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
EA+ + EM E G+ + T+NT+ F + G E+A +L +M + KP+ T++
Sbjct: 512 EALELV-TEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKM-LVGGVKPDAITYNT 569
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
L + GK + QLLD + ++ YT ++ G+C E A L +M+
Sbjct: 570 LTYAYCMQGKVKTAI-QLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLN 628
Query: 480 HDI 482
I
Sbjct: 629 EGI 631
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 140/289 (48%), Gaps = 7/289 (2%)
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVDE 255
G++ N T + ++ +L G VELA +V+ ++ + C PN +TF + G+ RV E
Sbjct: 279 GIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGC-SPNVYTFTSLMKGYFMRGRVLE 337
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
A M G P V++Y+T+I C + + +M+ GC PNV TY ++
Sbjct: 338 ALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALID 397
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
AK+GD A I KM G P+ + ++ L R+S +A + + +M +
Sbjct: 398 GFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIE-KMSTDNCP 456
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS 435
P+T TFNT I G E A ++ +M + C PN++T++ +L K + E L
Sbjct: 457 PNTVTFNTFIKGLCCSGRVECAINLFCQMEQY-GCSPNIKTYNEVLDGLLKENRIKEAL- 514
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
+L+ +M K + L++ TY + G C K E A L +M+ + P
Sbjct: 515 ELVTEMEEKG-MELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKP 562
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 143/302 (47%), Gaps = 5/302 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
G+E + Y ++ L +M + ++ +M + G ++T ++ F+ AG A
Sbjct: 349 GFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGA 408
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS--CIPPNAHTFNIFIH 245
++++ T G N +++ LC+ A S+ ++ + C PPN TFN FI
Sbjct: 409 SEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNC-PPNTVTFNTFIK 467
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G C RV+ A +M+ +GC P + +Y+ ++ ++ + EL+ EM+ +G
Sbjct: 468 GLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMEL 527
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N+VTY T+ G FEEA+++ KM + G KPD+ +N L Y +V+ A+ +
Sbjct: 528 NLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLL 587
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
P+ + + +++ + E+A L++M C N T++ L++ F
Sbjct: 588 DKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGICL-NAATWNALVRGLF 646
Query: 426 KT 427
+
Sbjct: 647 NS 648
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 146/333 (43%), Gaps = 34/333 (10%)
Query: 205 TMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
T ++++ L +E V+ + + ++K I + F I+ + ++ ++A +
Sbjct: 81 TYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFYRI 140
Query: 264 KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF 323
+ GC P V Y+ ++ + + F + + M+ G PNV TY ++ L K+
Sbjct: 141 REFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRV 200
Query: 324 EEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA---------------------- 361
+ A ++ +M G +PD + +I ++ + +V+EA
Sbjct: 201 DGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRFQPNVSVYNALINGFC 260
Query: 362 -------VYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNV 414
V++ +M E G+ P+ T++T+I+ S G+ E A V +M + C PNV
Sbjct: 261 REYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKM-FVRGCSPNV 319
Query: 415 QTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLF 474
TF L+K F G+ E L+ + + + + ++ Y +IHGLC K A +
Sbjct: 320 YTFTSLMKGYFMRGRVLEALN--IWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVS 377
Query: 475 KEMIGHDITPRYQTCRLILDE-VKQKHMYDAAE 506
+M + +P T ++D K + A+E
Sbjct: 378 SKMERNGCSPNVSTYGALIDGFAKAGDLVGASE 410
>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 665
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 176/356 (49%), Gaps = 8/356 (2%)
Query: 151 DQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLL 210
+ R + S+G + K++R G+ DA R G + N L+
Sbjct: 53 EAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLV 112
Query: 211 DTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHP 270
C+ G+++ AR + + +PP+A+T+ I G C RV +A + +M C P
Sbjct: 113 AGYCRYGRLDAARRLIASMP--VPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQP 170
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRIT 330
V++Y+ ++++ C+ F + ++LDEM+A+GC PN+VTY +++ + + ++A +I
Sbjct: 171 SVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQIL 230
Query: 331 EKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSH 390
++ G +PD+ + ++ L A R E V V EM EN P+ TF+ ++ F
Sbjct: 231 NRLSSYGFQPDTVSYTTVLKGLCAAKR-WEDVEVLFCEMVENNCVPNEVTFDMLVRFFCR 289
Query: 391 HGHHEKAFHVLEEMNKLEH-CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSL 449
G E+A VL+ M+ EH C N + ++ S K G+ D+ + L++M + S
Sbjct: 290 GGMVERAIEVLDRMS--EHGCTANTTLCNIVINSICKQGRVDDAF-EFLNNM-GSYGCSP 345
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
D +YT V+ GLCRA + E A L EM+ + P T + + QK + D A
Sbjct: 346 DTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQA 401
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 128/492 (26%), Positives = 210/492 (42%), Gaps = 62/492 (12%)
Query: 41 IESYCSDGARLDHHQVLCVDSPRLPD-------IDVIISKVHVGSSEDEVFQSLKQDHVC 93
+ YC G RLD + L P PD I + + VG + SL D +
Sbjct: 112 VAGYCRYG-RLDAARRLIASMPVPPDAYTYTPLIRGLCDRGRVGDA-----LSLLDDMLR 165
Query: 94 NAIQPSHYLVNKLIHRF--KDDWKSALGIF---RWAGSCPGYEHSSEIYEMMVDILGKVR 148
QPS L+ + A+ + R G P Y ++++ + +
Sbjct: 166 RECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIV----TYNVIINGMCRED 221
Query: 149 QMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN 207
++D R +L +S G + V++ A +WED F E+ N T +
Sbjct: 222 RVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFD 281
Query: 208 LLLDTLCKEGKVELARSVFLELK--SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKG 265
+L+ C+ G VE A V + C N NI I+ CK RVD+A + M
Sbjct: 282 MLVRFFCRGGMVERAIEVLDRMSEHGCTA-NTTLCNIVINSICKQGRVDDAFEFLNNMGS 340
Query: 266 HGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEE 325
+GC P ISY+T+++ CR + ELL+EM + CPPN VT+ T + L + G ++
Sbjct: 341 YGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQ 400
Query: 326 AIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ------------------- 366
AI + E+M G +N L+ RV A+ ++
Sbjct: 401 AILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLPCEPNTITYTTLLTGLC 460
Query: 367 ------------VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH-CKPN 413
EM +N + TFN +++ F G E+A ++++M +EH C PN
Sbjct: 461 HAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQM--MEHGCTPN 518
Query: 414 VQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLL 473
+ TF+ LL + ++E L +LL +V+K +SLD TY+ ++ L R ++ E A +
Sbjct: 519 LITFNTLLDGITEDCNSEEAL-ELLHGLVSK-GISLDTITYSSIVDVLSREDRIEEAVQM 576
Query: 474 FKEMIGHDITPR 485
F + + P+
Sbjct: 577 FHAVQDMGMRPK 588
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 180/368 (48%), Gaps = 17/368 (4%)
Query: 137 YEMMVDILGKVRQMDQ-MRALLEEMSKG---HIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++++ + K Q M+ L E +KG +IVT N I M R + +DA + +
Sbjct: 175 YTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCR---EDRVDDARQILN 231
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKI 250
L ++G + +T + +L LC + E +F E+ +C+ PN TF++ + +C+
Sbjct: 232 RLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCV-PNEVTFDMLVRFFCRG 290
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
V+ A + M HGC + +I S C+Q +E L+ M + GC P+ ++Y
Sbjct: 291 GMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISY 350
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
TTV+ L ++G +E+A + +M P+ FN I L + + +A+ + + +MP
Sbjct: 351 TTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIE-QMP 409
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKT 430
E G + T+N ++ F G + A LE N L C+PN T+ LL +
Sbjct: 410 EYGCSVGIVTYNALVNGFCVQGRVDSA---LELFNSLP-CEPNTITYTTLLTGLCHAERL 465
Query: 431 DECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCR 490
D ++LL +M+ ++ L++ T+ +++ C+ E A L ++M+ H TP T
Sbjct: 466 DAA-AELLAEMM-QNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFN 523
Query: 491 LILDEVKQ 498
+LD + +
Sbjct: 524 TLLDGITE 531
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 166/343 (48%), Gaps = 14/343 (4%)
Query: 68 DVIISKVHVGSSEDEVFQSLKQ--DHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFR--W 123
+++I+ + D+ F+ L + C+ S+ V K + R W+ A +
Sbjct: 316 NIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCR-AGRWEDAKELLNEMV 374
Query: 124 AGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAG 182
+CP E + + + IL + +DQ L+E+M + G V + T ++ F G
Sbjct: 375 RKNCPPNEVT---FNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQG 431
Query: 183 QWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFN 241
+ + A+ F+ L E NT T LL LC +++ A + E+ ++ P N TFN
Sbjct: 432 RVDSALELFNSLPC---EPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFN 488
Query: 242 IFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ 301
+ + +C+ V+EA +Q+M HGC P +I+++T++ N + ELL + ++
Sbjct: 489 VLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSK 548
Query: 302 GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
G + +TY++++ L++ EEA+++ ++ +G +P + +N ++ L + A
Sbjct: 549 GISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRA 608
Query: 362 VYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
+ + M N P+ ST+ +I + G ++A +VL E+
Sbjct: 609 IDFF-AHMVSNSCMPNESTYVILIEGLAREGLLKEARYVLSEL 650
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 9/193 (4%)
Query: 317 LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
L D EA R+ E+ G PD LI L R R +A V + E AP
Sbjct: 45 LIARDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRT--AEGSGAP 102
Query: 377 -DTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS 435
D +NT++ + +G + A ++ M P+ T+ PL++ G+ + LS
Sbjct: 103 VDVFAYNTLVAGYCRYGRLDAARRLIASM----PVPPDAYTYTPLIRGLCDRGRVGDALS 158
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE 495
LLDDM+ + + TYT+++ +C+++ A + EM TP T +I++
Sbjct: 159 -LLDDML-RRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIING 216
Query: 496 VKQKHMYDAAEKI 508
+ ++ D A +I
Sbjct: 217 MCREDRVDDARQI 229
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 71/154 (46%), Gaps = 4/154 (2%)
Query: 150 MDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLL 209
++ ++ ++E +++T NT+ + + E+A+ L + G+ +T T + +
Sbjct: 504 IELVQQMMEHGCTPNLITFNTL---LDGITEDCNSEEALELLHGLVSKGISLDTITYSSI 560
Query: 210 LDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGC 268
+D L +E ++E A +F ++ + P A +N + CK D A M + C
Sbjct: 561 VDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSC 620
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
P +Y +I+ R+ + +L E+ ++G
Sbjct: 621 MPNESTYVILIEGLAREGLLKEARYVLSELCSRG 654
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 172/345 (49%), Gaps = 6/345 (1%)
Query: 161 SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVE 220
S+G + K++R G+ DA R G + N L+ C+ G+++
Sbjct: 71 SRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLD 130
Query: 221 LARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQ 280
AR + + + P+A+T+ I G C RV EA + +M GC P V++Y+ +++
Sbjct: 131 AARRLIASMP--VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLE 188
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
+ C+ F + E+LDEM+A+GC PN+VTY +++ + + G ++A ++ G +P
Sbjct: 189 AVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQP 248
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
D+ + ++ L A R ++ ++ EM E P+ TF+ ++ F G E+A V
Sbjct: 249 DTVSYTTVLKGLCAAKRWEDVEELF-AEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQV 307
Query: 401 LEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHG 460
LE+M+ C N + ++ + K G+ D+ Q L++M + S D +YT V+ G
Sbjct: 308 LEQMSG-HGCAANTTLCNIVINTICKQGRVDDAF-QFLNNM-GSYGCSPDTISYTTVLKG 364
Query: 461 LCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
LCRA + E A L KEM+ + P T + + QK + + A
Sbjct: 365 LCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQA 409
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 127/481 (26%), Positives = 206/481 (42%), Gaps = 62/481 (12%)
Query: 41 IESYCSDGARLDHHQVLCVDSPRLPD-------IDVIISKVHVGSSEDEVFQSLKQDHVC 93
+ YC G +LD + L P PD I + + VG + SL D +
Sbjct: 120 VAGYCRYG-QLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEA-----LSLLDDMLH 173
Query: 94 NAIQPSHYLVNKLIHRF--KDDWKSALGIF---RWAGSCPGYEHSSEIYEMMVDILGKVR 148
QPS L+ + A+ + R G P Y ++++ + +
Sbjct: 174 RGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIV----TYNVIINGMCREG 229
Query: 149 QMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN 207
++D R L +S G + V++ A +WED F E+ N T +
Sbjct: 230 RVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFD 289
Query: 208 LLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
+L+ C+ G VE A V ++ N NI I+ CK RVD+A + M +
Sbjct: 290 MLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSY 349
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
GC P ISY+T+++ CR + ELL EM + CPPN VT+ T + L + G E+A
Sbjct: 350 GCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQA 409
Query: 327 IRITEKMKIVG--------------------------------SKPDSRFFNCLIYTLGR 354
+ E+M G KP++ + L+ L
Sbjct: 410 TMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLTGLCN 469
Query: 355 ASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH-CKPN 413
A R+ A + EM + AP+ TFN +++ F G ++A ++E+M +EH C PN
Sbjct: 470 AERLDAAAELL-AEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQM--MEHGCTPN 526
Query: 414 VQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLL 473
+ T++ LL ++E L +LL +V+ + +S DI TY+ +I L R ++ E A +
Sbjct: 527 LITYNTLLDGITNDCNSEEAL-ELLHGLVS-NGVSPDIVTYSSIIGVLSREDRVEEAIKM 584
Query: 474 F 474
F
Sbjct: 585 F 585
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 184/374 (49%), Gaps = 17/374 (4%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKG---HIVTLNTIAKVMRRFSGAGQW 184
G + S Y ++++ + K Q +L+EM +KG +IVT N I M R G+
Sbjct: 175 GCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCR---EGRV 231
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNI 242
+DA + L ++G + +T + +L LC + E +F E+ K+C+ PN TF++
Sbjct: 232 DDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCM-PNEVTFDM 290
Query: 243 FIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
+ +C+ V+ A +++M GHGC + +I + C+Q ++ L+ M + G
Sbjct: 291 LVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYG 350
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
C P+ ++YTTV+ L ++ +E+A + ++M P+ FN I L + +++A
Sbjct: 351 CSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQAT 410
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLK 422
+ + +M E+G + T+N ++ F G + A + M CKPN T+ LL
Sbjct: 411 MLIE-QMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM----PCKPNTITYTTLLT 465
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
+ D ++LL +M+ K + ++ T+ +++ C+ + A L ++M+ H
Sbjct: 466 GLCNAERLDAA-AELLAEMLQK-DCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGC 523
Query: 483 TPRYQTCRLILDEV 496
TP T +LD +
Sbjct: 524 TPNLITYNTLLDGI 537
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 137/291 (47%), Gaps = 11/291 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++ L + + + + LL+EM + + VT NT ++ G E A +
Sbjct: 358 YTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICIL---CQKGLIEQATMLIE 414
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINR 252
++ G E N T N L++ C +G+V+ A +F + PN T+ + G C R
Sbjct: 415 QMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPC--KPNTITYTTLLTGLCNAER 472
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
+D A + EM C P V++++ ++ +C++ + EL+++M GC PN++TY T
Sbjct: 473 LDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNT 532
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN 372
++ + + EEA+ + + G PD ++ +I L R RV+EA+ ++ + + +
Sbjct: 533 LLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHI-VQDL 591
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
G+ P +N ++ + + A M C PN T+ L++
Sbjct: 592 GMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVS-NGCMPNELTYITLIEG 641
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 86/191 (45%), Gaps = 7/191 (3%)
Query: 317 LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
L D EA R+ ++ G PD LI L R R +A V + +G A
Sbjct: 53 LIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAA-ERSGTAV 111
Query: 377 DTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQ 436
D +NT++ + +G + A ++ M P+ T+ P+++ G+ E LS
Sbjct: 112 DVFAYNTLVAGYCRYGQLDAARRLIASM----PVAPDAYTYTPIIRGLCDRGRVGEALS- 166
Query: 437 LLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV 496
LLDDM+++ + TYT+++ +C++ A + EM TP T +I++ +
Sbjct: 167 LLDDMLHRG-CQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGM 225
Query: 497 KQKHMYDAAEK 507
++ D A +
Sbjct: 226 CREGRVDDARE 236
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 105/226 (46%), Gaps = 7/226 (3%)
Query: 287 NFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFN 346
+ ++ L+D ++G P+V T ++ L + G +A R+ + G+ D +N
Sbjct: 58 DLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYN 117
Query: 347 CLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNK 406
L+ R ++ A + MP VAPD T+ +I G +A +L++M
Sbjct: 118 TLVAGYCRYGQLDAARRLI-ASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLH 173
Query: 407 LEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANK 466
C+P+V T+ LL++ K+ + + ++LD+M K + +I TY ++I+G+CR +
Sbjct: 174 -RGCQPSVVTYTVLLEAVCKSTGFGQAM-EVLDEMRAKG-CTPNIVTYNVIINGMCREGR 230
Query: 467 CEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
+ A + + P + +L + ++ E++ A M
Sbjct: 231 VDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEM 276
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 138/335 (41%), Gaps = 50/335 (14%)
Query: 68 DVIISKVHVGSSEDEVFQSLKQ--DHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFR--W 123
+++I+ + D+ FQ L + C+ S+ V K + R + W+ A + +
Sbjct: 324 NIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCR-AERWEDAKELLKEMV 382
Query: 124 AGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAG 182
+CP E + + + IL + ++Q L+E+MS+ G V + T ++ F G
Sbjct: 383 RKNCPPNEVT---FNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQG 439
Query: 183 QWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTF 240
+ + A+ F + + NT T LL LC +++ A + E+ K C PN TF
Sbjct: 440 RVDSALELFYSMPC---KPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDC-APNVVTF 495
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHP---------------C-------------- 271
N+ + +C+ +DEA +++M HGC P C
Sbjct: 496 NVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVS 555
Query: 272 ------VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEE 325
+++YS+II R+ + ++ +Q G P V Y ++ L K + +
Sbjct: 556 NGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDG 615
Query: 326 AIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
AI M G P+ + LI L ++E
Sbjct: 616 AIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKE 650
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 105/232 (45%), Gaps = 15/232 (6%)
Query: 104 NKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS 161
N L++ F + SAL +F ++ C + ++ Y ++ L ++D LL EM
Sbjct: 429 NALVNGFCVQGRVDSALELF-YSMPC---KPNTITYTTLLTGLCNAERLDAAAELLAEML 484
Query: 162 KG----HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEG 217
+ ++VT N + F G ++A+ +++ G N T N LLD + +
Sbjct: 485 QKDCAPNVVTFNVLVSF---FCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDC 541
Query: 218 KVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYS 276
E A + L S + P+ T++ I + +RV+EA ++ G P + Y+
Sbjct: 542 NSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYN 601
Query: 277 TIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
I+ + C++ N + M + GC PN +TY T++ LA DF + R
Sbjct: 602 KILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANE-DFLKETR 652
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 76/168 (45%), Gaps = 2/168 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
+ ++V + MD+ L+E+M + G L T ++ + E+A+ L
Sbjct: 495 FNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLV 554
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVD 254
+ G+ + T + ++ L +E +VE A +F ++ + P A +N + CK D
Sbjct: 555 SNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTD 614
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
A M +GC P ++Y T+I+ + + +LL E+ ++G
Sbjct: 615 GAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRG 662
>gi|115462947|ref|NP_001055073.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|50878350|gb|AAT85125.1| unknown protein, contains pentatricopeptide (PPR) repeat, PF01535
[Oryza sativa Japonica Group]
gi|113578624|dbj|BAF16987.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|215695094|dbj|BAG90285.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 793
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 215/437 (49%), Gaps = 16/437 (3%)
Query: 83 VFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVD 142
F S ++D + + PS L+ L W+ AL + RWA S G ++ + EM+V
Sbjct: 99 AFLSSRRDELLRSDLPS--LLKAL--ELSGHWEWALALLRWA-SDEGAADAAAL-EMVVR 152
Query: 143 ILGKVRQMDQMRALLEEMS--KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLE 200
LG+ Q D + LL+EM G + + V+ S AG++E A++ F EL G+
Sbjct: 153 ALGREGQHDVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVV 212
Query: 201 KNTETMNLLLDTLCKEGKVELARSVFL--ELKSC-IPPNAHTFNIFIHGWCKINRVDEAQ 257
T N++LD + G+ R V L E+++ + P+ T + I + +D+A
Sbjct: 213 PTIVTYNVVLDVYGRMGR-SWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAV 271
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
+++K G PCV++Y+ ++Q + + N+++ +L EM+ GC P+ VTY +
Sbjct: 272 AFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTY 331
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
A++G FEEA + + M G P++ +N ++ RV EA+ ++ M +NG P+
Sbjct: 332 ARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFD-RMKKNGYVPN 390
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
+T+N + M +LEEM++ C PN T++ +L C K G D ++++
Sbjct: 391 VNTYNLIFGMLGKKSRFTAMLEMLEEMSR-SGCTPNRVTWNTMLAVCGKRGMED-YVTRV 448
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVK 497
L+ M + L TY +I R +A+ ++ EMI TP T +L+ +
Sbjct: 449 LNGM-KSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLS 507
Query: 498 QKHMYDAAEKIEAVMKK 514
++ + A+ I + M K
Sbjct: 508 RQGDWSTAQSIVSKMLK 524
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/449 (22%), Positives = 187/449 (41%), Gaps = 86/449 (19%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++ + GK + +L+EM + VT N +A R AG +E+A + D
Sbjct: 289 YNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYAR---AGFFEEAAKCLD 345
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKIN 251
+ + GL NT T N ++ G+V+ A ++F +K + PN +T+N+ K +
Sbjct: 346 TMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKS 405
Query: 252 RVDEAQWTIQEMKGHGCHP------------------------------CVI-----SYS 276
R ++EM GC P C + +Y+
Sbjct: 406 RFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYN 465
Query: 277 TIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIV 336
T+I +Y R + + +++ DEM + G P + TY +++ L++ GD+ A I KM
Sbjct: 466 TLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKN 525
Query: 337 GSKPDSRFFNCLIYTLGRASR------VQEAVYVYQV----------------------- 367
G KP+ + ++ L+ + +++ VYV +
Sbjct: 526 GFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGV 585
Query: 368 -----EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLK 422
E+ G PD FN+M+ M++ +G + KA + + + K P++ T++ L+
Sbjct: 586 EKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSI-KQSGLSPDLITYNSLMD 644
Query: 423 SCFKTGKT---DECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
K+ ++ ++ L QL V D+ +Y VI+G C+ + A + EMI
Sbjct: 645 MYAKSNESWEAEKILKQLKSSQVKP-----DVVSYNTVINGFCKQGLIKEAQRILSEMIA 699
Query: 480 HDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+ P T ++ M++ A ++
Sbjct: 700 DGMAPCVVTYHTLVGGYASLEMFNEAREV 728
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 122/279 (43%), Gaps = 11/279 (3%)
Query: 90 DHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKV 147
+ + + P N L++ + DW +A I G++ + + Y +++ K
Sbjct: 486 EMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKN-GFKPNDQSYSLLLQCYAKG 544
Query: 148 RQMDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNT 203
+ ++ +E+ G I V L T+ V+ F + E + F E+ G + +
Sbjct: 545 GNAAGIESIEKEVYVGTIFPSWVILRTL--VIANFK-CRRLEGVEKAFQEVKAQGYKPDL 601
Query: 204 ETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQE 262
N +L K G A +F +K S + P+ T+N + + K N EA+ +++
Sbjct: 602 VIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQ 661
Query: 263 MKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGD 322
+K P V+SY+T+I +C+Q + +L EM A G P VVTY T++ A
Sbjct: 662 LKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEM 721
Query: 323 FEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
F EA + M KP + ++ + +A R EA
Sbjct: 722 FNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRYDEA 760
>gi|125551633|gb|EAY97342.1| hypothetical protein OsI_19265 [Oryza sativa Indica Group]
Length = 793
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 215/437 (49%), Gaps = 16/437 (3%)
Query: 83 VFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVD 142
F S ++D + + PS L+ L W+ AL + RWA S G ++ + EM+V
Sbjct: 99 AFLSSRRDELLRSDLPS--LLKAL--ELSGHWEWALALLRWA-SDEGAADAAAL-EMVVR 152
Query: 143 ILGKVRQMDQMRALLEEMS--KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLE 200
LG+ Q D + LL+EM G + + V+ S AG++E A++ F EL G+
Sbjct: 153 ALGREGQHDVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVV 212
Query: 201 KNTETMNLLLDTLCKEGKVELARSVFL--ELKSC-IPPNAHTFNIFIHGWCKINRVDEAQ 257
T N++LD + G+ R V L E+++ + P+ T + I + +D+A
Sbjct: 213 PTIVTYNVVLDVYGRMGR-SWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAV 271
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
+++K G PCV++Y+ ++Q + + N+++ +L EM+ GC P+ VTY +
Sbjct: 272 AFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTY 331
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
A++G FEEA + + M G P++ +N ++ RV EA+ ++ M +NG P+
Sbjct: 332 ARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFD-RMKKNGYVPN 390
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
+T+N + M +LEEM++ C PN T++ +L C K G D ++++
Sbjct: 391 VNTYNLIFGMLGKKSRFTAMLEMLEEMSR-SGCTPNRVTWNTMLAVCGKRGMED-YVTRV 448
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVK 497
L+ M + L TY +I R +A+ ++ EMI TP T +L+ +
Sbjct: 449 LNGM-KSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLS 507
Query: 498 QKHMYDAAEKIEAVMKK 514
++ + A+ I + M K
Sbjct: 508 RQGDWSTAQSIVSKMLK 524
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/449 (22%), Positives = 187/449 (41%), Gaps = 86/449 (19%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++ + GK + +L+EM + VT N +A R AG +E+A + D
Sbjct: 289 YNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYAR---AGFFEEAAKCLD 345
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKIN 251
+ + GL NT T N ++ G+V+ A ++F +K + PN +T+N+ K +
Sbjct: 346 TMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKS 405
Query: 252 RVDEAQWTIQEMKGHGCHP------------------------------CVI-----SYS 276
R ++EM GC P C + +Y+
Sbjct: 406 RFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYN 465
Query: 277 TIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIV 336
T+I +Y R + + +++ DEM + G P + TY +++ L++ GD+ A I KM
Sbjct: 466 TLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKN 525
Query: 337 GSKPDSRFFNCLIYTLGRASR------VQEAVYVYQV----------------------- 367
G KP+ + ++ L+ + +++ VYV +
Sbjct: 526 GFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGV 585
Query: 368 -----EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLK 422
E+ G PD FN+M+ M++ +G + KA + + + K P++ T++ L+
Sbjct: 586 EKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSI-KQSGLSPDLITYNSLMD 644
Query: 423 SCFKTGKT---DECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
K+ ++ ++ L QL V D+ +Y VI+G C+ + A + EMI
Sbjct: 645 MYAKSNESWEAEKILKQLKSSQVKP-----DVVSYNTVINGFCKQGLIKEAQRILSEMIA 699
Query: 480 HDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+ P T ++ M++ A ++
Sbjct: 700 DGMAPCVVTYHTLVGGYASLEMFNEAREV 728
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 122/279 (43%), Gaps = 11/279 (3%)
Query: 90 DHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKV 147
+ + + P N L++ + DW +A I G++ + + Y +++ K
Sbjct: 486 EMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKN-GFKPNDQSYSLLLQCYAKG 544
Query: 148 RQMDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNT 203
+ ++ +E+ G I V L T+ V+ F + E + F E+ G + +
Sbjct: 545 GNAAGIESIEKEVYVGTIFPSWVILRTL--VIANFK-CRRLEGVEKAFQEVKAQGYKPDL 601
Query: 204 ETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQE 262
N +L K G A +F +K S + P+ T+N + + K N EA+ +++
Sbjct: 602 VIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQ 661
Query: 263 MKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGD 322
+K P V+SY+T+I +C+Q + +L EM A G P VVTY T++ A
Sbjct: 662 LKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEM 721
Query: 323 FEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
F EA + M KP + ++ + +A R EA
Sbjct: 722 FNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRYDEA 760
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 172/345 (49%), Gaps = 6/345 (1%)
Query: 161 SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVE 220
S+G + K++R G+ DA R G + N L+ C+ G+++
Sbjct: 71 SRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLD 130
Query: 221 LARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQ 280
AR + + + P+A+T+ I G C RV EA + +M GC P V++Y+ +++
Sbjct: 131 AARRLIASMP--VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLE 188
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
+ C+ F + E+LDEM+A+GC PN+VTY +++ + + G ++A ++ G +P
Sbjct: 189 AVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQP 248
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
D+ + ++ L A R ++ ++ EM E P+ TF+ ++ F G E+A V
Sbjct: 249 DTVSYTTVLKGLCAAKRWEDVEELF-AEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQV 307
Query: 401 LEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHG 460
LE+M+ C N + ++ + K G+ D+ Q L++M + S D +YT V+ G
Sbjct: 308 LEQMSG-HGCAANTTLCNIVINTICKQGRVDDAF-QFLNNM-GSYGCSPDTISYTTVLKG 364
Query: 461 LCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
LCRA + E A L KEM+ + P T + + QK + + A
Sbjct: 365 LCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQA 409
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 128/481 (26%), Positives = 207/481 (43%), Gaps = 62/481 (12%)
Query: 41 IESYCSDGARLDHHQVLCVDSPRLPD-------IDVIISKVHVGSSEDEVFQSLKQDHVC 93
+ YC G +LD + L P PD I + + VG + SL D +
Sbjct: 120 VAGYCRYG-QLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEA-----LSLLDDMLH 173
Query: 94 NAIQPSHYLVNKLIHRF--KDDWKSALGIF---RWAGSCPGYEHSSEIYEMMVDILGKVR 148
QPS L+ + A+ + R G P Y ++++ + +
Sbjct: 174 RGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIV----TYNVIINGMCREG 229
Query: 149 QMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN 207
++D R L +S G + V++ A +WED F E+ N T +
Sbjct: 230 RVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFD 289
Query: 208 LLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
+L+ C+ G VE A V ++ N NI I+ CK RVD+A + M +
Sbjct: 290 MLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSY 349
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
GC P ISY+T+++ CR + ELL EM + CPPN VT+ T + L + G E+A
Sbjct: 350 GCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQA 409
Query: 327 IRITEKMKIVG--------------------------------SKPDSRFFNCLIYTLGR 354
+ E+M G KP++ + L+ L
Sbjct: 410 TMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLTGLCN 469
Query: 355 ASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH-CKPN 413
A R+ A + EM + AP+ TFN +++ F G ++A ++E+M +EH C PN
Sbjct: 470 AERLDAAAELL-AEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQM--MEHGCTPN 526
Query: 414 VQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLL 473
+ T++ LL K ++E L +LL +V+ + +S DI TY+ +I L R ++ E A +
Sbjct: 527 LITYNTLLDGITKDCNSEEAL-ELLHGLVS-NGVSPDIVTYSSIIGVLSREDRVEEAIKM 584
Query: 474 F 474
F
Sbjct: 585 F 585
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 185/376 (49%), Gaps = 17/376 (4%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKG---HIVTLNTIAKVMRRFSGAGQW 184
G + S Y ++++ + K Q +L+EM +KG +IVT N I M R G+
Sbjct: 175 GCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCR---EGRV 231
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNI 242
+DA + L ++G + +T + +L LC + E +F E+ K+C+ PN TF++
Sbjct: 232 DDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCM-PNEVTFDM 290
Query: 243 FIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
+ +C+ V+ A +++M GHGC + +I + C+Q ++ L+ M + G
Sbjct: 291 LVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYG 350
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
C P+ ++YTTV+ L ++ +E+A + ++M P+ FN I L + +++A
Sbjct: 351 CSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQAT 410
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLK 422
+ + +M E+G + T+N ++ F G + A + M CKPN T+ LL
Sbjct: 411 MLIE-QMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM----PCKPNTITYTTLLT 465
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
+ D ++LL +M+ K + ++ T+ +++ C+ + A L ++M+ H
Sbjct: 466 GLCNAERLDAA-AELLAEMLQK-DCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGC 523
Query: 483 TPRYQTCRLILDEVKQ 498
TP T +LD + +
Sbjct: 524 TPNLITYNTLLDGITK 539
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 138/291 (47%), Gaps = 11/291 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++ L + + + + LL+EM + + VT NT ++ G E A +
Sbjct: 358 YTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICIL---CQKGLIEQATMLIE 414
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINR 252
++ G E N T N L++ C +G+V+ A +F + PN T+ + G C R
Sbjct: 415 QMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPC--KPNTITYTTLLTGLCNAER 472
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
+D A + EM C P V++++ ++ +C++ + EL+++M GC PN++TY T
Sbjct: 473 LDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNT 532
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN 372
++ + K + EEA+ + + G PD ++ +I L R RV+EA+ ++ + + +
Sbjct: 533 LLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHI-VQDL 591
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
G+ P +N ++ + + A M C PN T+ L++
Sbjct: 592 GMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVS-NGCMPNELTYITLIEG 641
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 86/191 (45%), Gaps = 7/191 (3%)
Query: 317 LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
L D EA R+ ++ G PD LI L R R +A V + +G A
Sbjct: 53 LIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAA-ERSGTAV 111
Query: 377 DTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQ 436
D +NT++ + +G + A ++ M P+ T+ P+++ G+ E LS
Sbjct: 112 DVFAYNTLVAGYCRYGQLDAARRLIASM----PVAPDAYTYTPIIRGLCDRGRVGEALS- 166
Query: 437 LLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV 496
LLDDM+++ + TYT+++ +C++ A + EM TP T +I++ +
Sbjct: 167 LLDDMLHRG-CQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGM 225
Query: 497 KQKHMYDAAEK 507
++ D A +
Sbjct: 226 CREGRVDDARE 236
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 105/226 (46%), Gaps = 7/226 (3%)
Query: 287 NFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFN 346
+ ++ L+D ++G P+V T ++ L + G +A R+ + G+ D +N
Sbjct: 58 DLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYN 117
Query: 347 CLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNK 406
L+ R ++ A + MP VAPD T+ +I G +A +L++M
Sbjct: 118 TLVAGYCRYGQLDAARRLI-ASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLH 173
Query: 407 LEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANK 466
C+P+V T+ LL++ K+ + + ++LD+M K + +I TY ++I+G+CR +
Sbjct: 174 -RGCQPSVVTYTVLLEAVCKSTGFGQAM-EVLDEMRAKG-CTPNIVTYNVIINGMCREGR 230
Query: 467 CEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
+ A + + P + +L + ++ E++ A M
Sbjct: 231 VDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEM 276
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 138/335 (41%), Gaps = 50/335 (14%)
Query: 68 DVIISKVHVGSSEDEVFQSLKQ--DHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFR--W 123
+++I+ + D+ FQ L + C+ S+ V K + R + W+ A + +
Sbjct: 324 NIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCR-AERWEDAKELLKEMV 382
Query: 124 AGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAG 182
+CP E + + + IL + ++Q L+E+MS+ G V + T ++ F G
Sbjct: 383 RKNCPPNEVT---FNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQG 439
Query: 183 QWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTF 240
+ + A+ F + + NT T LL LC +++ A + E+ K C PN TF
Sbjct: 440 RVDSALELFYSMPC---KPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDC-APNVVTF 495
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHP---------------C-------------- 271
N+ + +C+ +DEA +++M HGC P C
Sbjct: 496 NVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVS 555
Query: 272 ------VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEE 325
+++YS+II R+ + ++ +Q G P V Y ++ L K + +
Sbjct: 556 NGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDG 615
Query: 326 AIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
AI M G P+ + LI L ++E
Sbjct: 616 AIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKE 650
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 80/171 (46%), Gaps = 8/171 (4%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK----GHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
+ ++V + MD+ L+E+M + +++T NT+ + + + E+A+
Sbjct: 495 FNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNS---EEALELLH 551
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKIN 251
L + G+ + T + ++ L +E +VE A +F ++ + P A +N + CK
Sbjct: 552 GLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRC 611
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
D A M +GC P ++Y T+I+ + + +LL E+ ++G
Sbjct: 612 NTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRG 662
>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
Length = 561
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 190/387 (49%), Gaps = 13/387 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ L K ++DQ LL+EM +G + V++ AG++ DA+ F +
Sbjct: 33 YGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVA 92
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS---CIPPNAHTFNIFIHGWCKINR 252
+ T N+L+D L K G+VE A +F + + C+P N T+ I+G CK +
Sbjct: 93 GTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLP-NVVTYTTVINGLCKDGK 151
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
+D A + M GC P VI+YS +++ C+ K + LL EM +G P+V+ Y T
Sbjct: 152 LDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNT 211
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN 372
+++ L KS +EA+ + + M G P +N L+ R+ +V A + QV M E
Sbjct: 212 LLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQV-MSER 270
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD- 431
G PD +NT+I + A +L++M C P+V T+ ++ K + D
Sbjct: 271 GCPPDVINYNTVIAGLCRDARLDDAQALLKQMVA-ARCVPDVITYSTIIDGLCKDWRVDA 329
Query: 432 ----ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
E ++L+ M+ + + TY +VI GLCRA K + A L + MI ++ P
Sbjct: 330 DWKLEAACEILE-MMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLS 388
Query: 488 TCRLILDEVKQKHMYDAAEKIEAVMKK 514
+ +++ + + H DAA KI +M +
Sbjct: 389 SFSMVIGSLCKSHDLDAAYKIFGMMSE 415
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/461 (24%), Positives = 213/461 (46%), Gaps = 29/461 (6%)
Query: 61 SPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWK----- 115
+P + ++++ + +E FQ + H + P+ +I+ D K
Sbjct: 97 TPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAI 156
Query: 116 SALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK----GHIVTLNTI 171
L + G CP + Y ++V+ L K + D+ LL+EM++ ++ NT+
Sbjct: 157 ELLDLMNETGCCP----NVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTL 212
Query: 172 AKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELA-RSVFLELK 230
+ + + ++A+ + G T N L++ C+ +V+ A R + + +
Sbjct: 213 ---LNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSE 269
Query: 231 SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQY---- 286
PP+ +N I G C+ R+D+AQ +++M C P VI+YSTII C+ +
Sbjct: 270 RGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDA 329
Query: 287 --NFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRF 344
E+L+ M+ GCPPN TY V+ L ++ ++A+ + +M PD
Sbjct: 330 DWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSS 389
Query: 345 FNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
F+ +I +L ++ + A ++ + M E P+ + +I S G +KA V E M
Sbjct: 390 FSMVIGSLCKSHDLDAAYKIFGM-MSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELM 448
Query: 405 NKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRA 464
+E +P V T++ +L G+ +E + ++++ M++K D +Y +I GLCR
Sbjct: 449 --VESFRPGVATYNSVLDGLCGVGRIEEAV-RMVEGMIHKECFP-DGASYGALIRGLCRV 504
Query: 465 NKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDA 504
+ E AY LF+ + ++++E+ K+K + DA
Sbjct: 505 SCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDA 545
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 158/337 (46%), Gaps = 9/337 (2%)
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHT 239
AGQ AV+ F E N T L+ LCK GK++ A + E++ IPP
Sbjct: 11 AGQHGQAVQLFREERCV---PNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAV 67
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
N I G CK R +A + + G C P +I+++ ++ + + + +++ + M
Sbjct: 68 HNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMH 127
Query: 300 AQG-CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRV 358
C PNVVTYTTV++ L K G + AI + + M G P+ ++ L+ L +A R
Sbjct: 128 TSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRT 187
Query: 359 QEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFH 418
+ + Q EM G PD +NT++ ++A +++ M + C P V T++
Sbjct: 188 DKGFTLLQ-EMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIR-SGCYPTVVTYN 245
Query: 419 PLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
L++ ++ + D L ++++ D+ Y VI GLCR + + A L K+M+
Sbjct: 246 SLMELFCRSKQVDRAFR--LIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMV 303
Query: 479 GHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
P T I+D + + DA K+EA + L
Sbjct: 304 AARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEIL 340
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 131/270 (48%), Gaps = 6/270 (2%)
Query: 248 CKIN---RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
C +N R + +Q + C P +Y ++I C+ + YELLDEM+ +G P
Sbjct: 3 CALNLLVRAGQHGQAVQLFREERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIP 62
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
P V + V+ L K+G F +A+ + + PD FN L+ L ++ RV+EA +
Sbjct: 63 PGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQI 122
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
++ + P+ T+ T+I G ++A +L+ MN+ C PNV T+ L++
Sbjct: 123 FESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNE-TGCCPNVITYSVLVEGL 181
Query: 425 FKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
K G+TD+ + LL +M + D+ Y +++GLC++ + + A L + MI P
Sbjct: 182 CKAGRTDKGFT-LLQEM-TRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYP 239
Query: 485 RYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
T +++ + D A ++ VM +
Sbjct: 240 TVVTYNSLMELFCRSKQVDRAFRLIQVMSE 269
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 103/237 (43%), Gaps = 10/237 (4%)
Query: 109 RFKDDWK-----SALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKG 163
R DWK L + + G CP ++ Y ++++ L + R+ Q ALL M
Sbjct: 326 RVDADWKLEAACEILEMMKQTG-CP---PNAGTYAVVIEGLCRARKSQQALALLRRMIDS 381
Query: 164 HIVT-LNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELA 222
+V L++ + V+ + + A + F + + N L+D L K G+V+ A
Sbjct: 382 EVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKA 441
Query: 223 RSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSY 282
VF + P T+N + G C + R++EA ++ M C P SY +I+
Sbjct: 442 VRVFELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGL 501
Query: 283 CRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
CR + YEL ++A+G V Y +++ L K +A + K+ G K
Sbjct: 502 CRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGYK 558
>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 669
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 177/354 (50%), Gaps = 6/354 (1%)
Query: 161 SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVE 220
S+G + K++R G+ DA R G + N L+ C+ G+++
Sbjct: 67 SRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLD 126
Query: 221 LARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQ 280
AR + + +PP+A+T+ I G C RV +A + +M GC P V++Y+ +++
Sbjct: 127 AARRLIASMP--VPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLE 184
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
+ C+ F + +LDEM+A+GC PN+VTY +++ + + G ++A I ++ G +P
Sbjct: 185 AVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQP 244
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
D + ++ L A+R + V V EM + P+ TF+ ++ F G E+A V
Sbjct: 245 DIVSYTTVLKGLC-AARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQV 303
Query: 401 LEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHG 460
L++M++ C PN + ++ + K G+ D+ L++M + + D +YT V+ G
Sbjct: 304 LQQMSQ-HGCTPNTTLCNIVINAICKQGRVDDAY-DFLNNM-GMYGCNPDTISYTTVLRG 360
Query: 461 LCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
LCRA + E A L EM+ + P T + + QK + + A K+ +M +
Sbjct: 361 LCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPE 414
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 129/494 (26%), Positives = 211/494 (42%), Gaps = 66/494 (13%)
Query: 41 IESYCSDGARLDHHQVLCVDSPRLPD----IDVIISKVHVGSSEDEVFQSLKQDHVCNAI 96
+ YC G RLD + L P PD +I G D + +L D +
Sbjct: 116 VAGYCRYG-RLDAARRLIASMPVPPDAYTYTPIIRGLCDRGRVGDAL--ALLDDMLQRGC 172
Query: 97 QPSHYLVNKLIHRF--KDDWKSALGIF---RWAGSCPGYEHSSEIYEMMVDILGKVRQMD 151
QPS L+ + A+ + R G P Y ++++ + + ++D
Sbjct: 173 QPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIV----TYNVIINGMCREGRVD 228
Query: 152 QMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLL 210
+ +L +S G + + V++ A +W+D F E+ N T ++L+
Sbjct: 229 DAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLV 288
Query: 211 DTLCKEGKVELARSVFLELK--SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGC 268
C+ G VE A V ++ C P N NI I+ CK RVD+A + M +GC
Sbjct: 289 RFFCRGGMVERAIQVLQQMSQHGCTP-NTTLCNIVINAICKQGRVDDAYDFLNNMGMYGC 347
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
+P ISY+T+++ CR + ELL EM + CPPN VT+ T + L + G E+AI+
Sbjct: 348 NPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIK 407
Query: 329 ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY----------------------- 365
+ E M G +N L++ RV A+ ++
Sbjct: 408 LIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEPNTITYTTLLTGLCHAE 467
Query: 366 -------------QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH-CK 411
Q + P N V TFN +++ F G E+A ++ +M +EH C
Sbjct: 468 RLDAAAELLAGMIQKDCPLNAV-----TFNVLVSFFCQKGFVEEAMELVNQM--MEHGCT 520
Query: 412 PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAY 471
PN+ TF+ LL K ++E L +LL +V+K +SLD TY+ V+ L R ++ E A
Sbjct: 521 PNLITFNTLLDGITKDCNSEEAL-ELLHGLVSK-GVSLDTITYSSVVDVLSREDRTEEAI 578
Query: 472 LLFKEMIGHDITPR 485
+ + + P+
Sbjct: 579 QMLHAVQDMGMRPK 592
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 188/393 (47%), Gaps = 18/393 (4%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQ-MRALLEEMSKG---HIVTLNTIAKVMRRFSGAGQW 184
G + S Y ++++ + K + M L E +KG +IVT N I M R G+
Sbjct: 171 GCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCR---EGRV 227
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNI 242
+DA + L ++G + + + +L LC + + + +F E+ K C+ PN TF++
Sbjct: 228 DDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCV-PNEVTFDM 286
Query: 243 FIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
+ +C+ V+ A +Q+M HGC P + +I + C+Q Y+ L+ M G
Sbjct: 287 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG 346
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
C P+ ++YTTV+ L ++G +E A + +M P+ FN I L + +++A+
Sbjct: 347 CNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAI 406
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLK 422
+ ++ MPE G + T+N ++ F G + A LE N L C+PN T+ LL
Sbjct: 407 KLIEL-MPEYGCSVGIVTYNALVHGFCVQGRVDSA---LELFNNLP-CEPNTITYTTLLT 461
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
+ D ++LL M+ K L+ T+ +++ C+ E A L +M+ H
Sbjct: 462 GLCHAERLDAA-AELLAGMIQK-DCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGC 519
Query: 483 TPRYQTCRLILDEV-KQKHMYDAAEKIEAVMKK 514
TP T +LD + K + +A E + ++ K
Sbjct: 520 TPNLITFNTLLDGITKDCNSEEALELLHGLVSK 552
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 144/282 (51%), Gaps = 11/282 (3%)
Query: 126 SCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQW 184
+CP E + + + IL + ++Q L+E M + G V + T ++ F G+
Sbjct: 381 NCPPNEVT---FNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRV 437
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNI 242
+ A+ F+ L E NT T LL LC +++ A + + K C P NA TFN+
Sbjct: 438 DSALELFNNLPC---EPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDC-PLNAVTFNV 493
Query: 243 FIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
+ +C+ V+EA + +M HGC P +I+++T++ + N + ELL + ++G
Sbjct: 494 LVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKG 553
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
+ +TY++V+ L++ EEAI++ ++ +G +P +N +++ L + +A+
Sbjct: 554 VSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAI 613
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
+ M NG P+ ST+ +I +H G ++A +VL E+
Sbjct: 614 DFFAY-MVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSEL 654
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 110/230 (47%), Gaps = 7/230 (3%)
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA ++ G P V + +I++ CR+ S +L +A G P +V Y T++
Sbjct: 57 EAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLV 116
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
+ + G + A R+ M + PD+ + +I L RV +A+ + +M + G
Sbjct: 117 AGYCRYGRLDAARRLIASMPV---PPDAYTYTPIIRGLCDRGRVGDALALLD-DMLQRGC 172
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
P T+ ++ +A +VL+EM + + C PN+ T++ ++ + G+ D+
Sbjct: 173 QPSVVTYTVLLEAVCKSSGFGEAMNVLDEM-RAKGCTPNIVTYNVIINGMCREGRVDD-- 229
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
++ + + ++ + DI +YT V+ GLC A + + +LF EM+ P
Sbjct: 230 AKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVP 279
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 100/230 (43%), Gaps = 14/230 (6%)
Query: 104 NKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS 161
N L+H F + SAL +F + P E ++ Y ++ L ++D LL M
Sbjct: 425 NALVHGFCVQGRVDSALELF---NNLP-CEPNTITYTTLLTGLCHAERLDAAAELLAGMI 480
Query: 162 KG----HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEG 217
+ + VT N + F G E+A+ +++ G N T N LLD + K+
Sbjct: 481 QKDCPLNAVTFNVLVSF---FCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDC 537
Query: 218 KVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYS 276
E A + L S + + T++ + + +R +EA + ++ G P V Y+
Sbjct: 538 NSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYN 597
Query: 277 TIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
I+ + C++ + + M + GC PN TY ++ LA G +EA
Sbjct: 598 KILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEA 647
>gi|125561327|gb|EAZ06775.1| hypothetical protein OsI_29018 [Oryza sativa Indica Group]
Length = 511
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 110/381 (28%), Positives = 179/381 (46%), Gaps = 15/381 (3%)
Query: 133 SSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
+++ Y+ +VD LG+ RQ D L+ E + T T A + RR+ AG AVR FD
Sbjct: 102 AADAYDAVVDALGRARQFDAAWRLVVEAAADGAATPRTFAVLARRYVAAGMTRQAVRAFD 161
Query: 193 ELGTF-GLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKIN 251
++ F G E + LLDTLCK ++A VF + K PN + + I+GWCK+N
Sbjct: 162 DMEAFVGREPDAAEFTTLLDTLCKYKYPKVAAEVFNKRKYKYEPNEKMYTVLIYGWCKVN 221
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCR------QYNFSKVY----ELLDEMQAQ 301
R D AQ +++M HG P +++Y+ ++ CR Y F + +LL EM +
Sbjct: 222 RNDMAQKFLKDMIYHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVRAAEDLLKEMHQR 281
Query: 302 GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
G P+V +Y+ ++ +++ E + + MK G P + +I L R+ +A
Sbjct: 282 GIEPDVTSYSVILHVYSRAHKPELCLCMFRSMKERGICPTVATYTSVIKCLASCGRLDDA 341
Query: 362 VYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKL-EHCKPNVQTFHPL 420
+ EM GV P +T+N + A + +M P++ T++ L
Sbjct: 342 ESLLD-EMASEGVCPSPATYNCFFKEYRGRKDVNGALQLYNKMKAPGSPATPDIHTYNIL 400
Query: 421 LKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH 480
L K + D + Q+ +DM + + D+ +YTL++HGLC K A F EMI
Sbjct: 401 LGMFIKLNQHDTVM-QVWNDMC-ESTVGPDLNSYTLLVHGLCDNKKWREACQFFMEMIER 458
Query: 481 DITPRYQTCRLILDEVKQKHM 501
P+ T + + Q M
Sbjct: 459 GFLPQKITFETLYRGLIQADM 479
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 93/230 (40%), Gaps = 15/230 (6%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDA 187
G E Y +++ + + + + + M +G T+ T V++ + G+ +DA
Sbjct: 282 GIEPDVTSYSVILHVYSRAHKPELCLCMFRSMKERGICPTVATYTSVIKCLASCGRLDDA 341
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK---SCIPPNAHTFNIFI 244
DE+ + G+ + T N V A ++ ++K S P+ HT+NI +
Sbjct: 342 ESLLDEMASEGVCPSPATYNCFFKEYRGRKDVNGALQLYNKMKAPGSPATPDIHTYNILL 401
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
+ K+N+ D +M P + SY+ ++ C + + + EM +G
Sbjct: 402 GMFIKLNQHDTVMQVWNDMCESTVGPDLNSYTLLVHGLCDNKKWREACQFFMEMIERGFL 461
Query: 305 PNVVTYTTVMSYLAKSGDF-----------EEAIRITEKMKIVGSKPDSR 343
P +T+ T+ L ++ EEA + E+ K KP R
Sbjct: 462 PQKITFETLYRGLIQADMLRTWRRLKKRVDEEAAKFGEEFKPYHIKPYKR 511
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 182/351 (51%), Gaps = 11/351 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y MV Q+D R L+ EM + T NT+ +R G G+ +A+ DE+
Sbjct: 129 YNAMVAGYCGAGQLDAARRLVAEMPVEPDAYTYNTL---IRGLCGRGRTANALAVLDEML 185
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRV 253
+ T +LL+ CK + A + E+ K C P + T+N+ ++G C+ RV
Sbjct: 186 RRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTP-DIVTYNVVVNGICQEGRV 244
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
D+A ++ + +GC P +SY+ +++ C + EL+ EM +GCPPNVVT+ +
Sbjct: 245 DDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNML 304
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
+S+L + G E A+ + E++ G P+S +N L++ + ++ +A+ + M G
Sbjct: 305 ISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDL-MVSRG 363
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
PD ++NT++T G + A +L ++ K + C P + +++ ++ K GKT E
Sbjct: 364 CYPDIVSYNTLLTALCRSGEVDVAVELLHQL-KDKGCAPVLISYNTVIDGLTKAGKTKEA 422
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
L +LL++MV+K L DI TY+ + GLCR ++ E A F ++ I P
Sbjct: 423 L-ELLNEMVSK-GLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRP 471
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 143/316 (45%), Gaps = 46/316 (14%)
Query: 169 NTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE 228
T A ++++ S +G+ +A R G + N ++ C G+++ AR + E
Sbjct: 97 GTCAALIKKLSASGRTAEARRVLAACG-----PDVMAYNAMVAGYCGAGQLDAARRLVAE 151
Query: 229 LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
+ + P+A+T+N I G C R A + EM C P V++Y+ ++++ C++ +
Sbjct: 152 MP--VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGY 209
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
+ +LLDEM+ +GC P++VTY V++ + + G ++AI + + G +P++ +N +
Sbjct: 210 KQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIV 269
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
+ L A R ++A + EM + G P+ TFN +I+ G E A VLE++ K
Sbjct: 270 LKGLCTAERWEDAEELMG-EMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKY- 327
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
C PN +++PLL H C+ K +
Sbjct: 328 GCTPNSLSYNPLL-------------------------------------HAFCKQKKMD 350
Query: 469 WAYLLFKEMIGHDITP 484
A M+ P
Sbjct: 351 KAMAFLDLMVSRGCYP 366
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 130/267 (48%), Gaps = 37/267 (13%)
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSC 232
V++ A +WEDA E+G G N T N+L+ LC++G VE A V ++ K
Sbjct: 269 VLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYG 328
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQW---------------------------------- 258
PN+ ++N +H +CK ++D+A
Sbjct: 329 CTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAV 388
Query: 259 -TIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
+ ++K GC P +ISY+T+I + + ELL+EM ++G P+++TY+T+ + L
Sbjct: 389 ELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGL 448
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
+ E+AIR K++ +G +P++ +N +I L + A+ ++ M NG P+
Sbjct: 449 CREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAY-MIGNGCMPN 507
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEM 404
ST+ +I ++ G ++A +L+E+
Sbjct: 508 ESTYTILIEGLAYEGLIKEARDLLDEL 534
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 128/316 (40%), Gaps = 74/316 (23%)
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQ--------- 285
P+A T I R EA+ + C P V++Y+ ++ YC
Sbjct: 94 PDAGTCAALIKKLSASGRTAEARRVLA-----ACGPDVMAYNAMVAGYCGAGQLDAARRL 148
Query: 286 ------------YN-----------FSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGD 322
YN + +LDEM + C P+VVTYT ++ K
Sbjct: 149 VAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSG 208
Query: 323 FEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV---------------YVYQV 367
+++A+++ ++M+ G PD +N ++ + + RV +A+ Y +
Sbjct: 209 YKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNI 268
Query: 368 -------------------EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
EM + G P+ TFN +I+ G E A VLE++ K
Sbjct: 269 VLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKY- 327
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
C PN +++PLL + K K D+ ++ LD MV++ DI +Y ++ LCR+ + +
Sbjct: 328 GCTPNSLSYNPLLHAFCKQKKMDKAMA-FLDLMVSRGCYP-DIVSYNTLLTALCRSGEVD 385
Query: 469 WAYLLFKEMIGHDITP 484
A L ++ P
Sbjct: 386 VAVELLHQLKDKGCAP 401
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 12/210 (5%)
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
P+ T ++ L+ SG EA R+ + PD +N ++ A ++ A +
Sbjct: 94 PDAGTCAALIKKLSASGRTAEARRV-----LAACGPDVMAYNAMVAGYCGAGQLDAARRL 148
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
EMP V PD T+NT+I G A VL+EM + C P+V T+ LL++
Sbjct: 149 V-AEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLR-RRCVPDVVTYTILLEAT 203
Query: 425 FKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
K + + +LLD+M +K + DI TY +V++G+C+ + + A K + + P
Sbjct: 204 CKRSGYKQAM-KLLDEMRDKG-CTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEP 261
Query: 485 RYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
+ ++L + ++ AE++ M +
Sbjct: 262 NTVSYNIVLKGLCTAERWEDAEELMGEMGQ 291
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 2/168 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ L + ++D LL ++ KG L + V+ + AG+ ++A+ +E+
Sbjct: 371 YNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMV 430
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVD 254
+ GL+ + T + + LC+E ++E A F +++ I PN +N I G CK
Sbjct: 431 SKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETH 490
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
A M G+GC P +Y+ +I+ + + +LLDE+ ++G
Sbjct: 491 SAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG 538
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 172/345 (49%), Gaps = 6/345 (1%)
Query: 161 SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVE 220
S+G + K++R G+ DA R G + N L+ C+ G+++
Sbjct: 102 SRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLD 161
Query: 221 LARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQ 280
AR + + + P+A+T+ I G C RV EA + +M GC P V++Y+ +++
Sbjct: 162 AARRLIASMP--VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLE 219
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
+ C+ F + E+LDEM+A+GC PN+VTY +++ + + G ++A ++ G +P
Sbjct: 220 AVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQP 279
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
D+ + ++ L A R ++ ++ EM E P+ TF+ ++ F G E+A V
Sbjct: 280 DTVSYTTVLKGLCAAKRWEDVEELF-AEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQV 338
Query: 401 LEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHG 460
LE+M+ C N + ++ + K G+ D+ Q L++M + S D +YT V+ G
Sbjct: 339 LEQMSG-HGCAANTTLCNIVINTICKQGRVDDAF-QFLNNM-GSYGCSPDTISYTTVLKG 395
Query: 461 LCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
LCRA + E A L KEM+ + P T + + QK + + A
Sbjct: 396 LCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQA 440
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 128/481 (26%), Positives = 207/481 (43%), Gaps = 62/481 (12%)
Query: 41 IESYCSDGARLDHHQVLCVDSPRLPD-------IDVIISKVHVGSSEDEVFQSLKQDHVC 93
+ YC G +LD + L P PD I + + VG + SL D +
Sbjct: 151 VAGYCRYG-QLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEA-----LSLLDDMLH 204
Query: 94 NAIQPSHYLVNKLIHRF--KDDWKSALGIF---RWAGSCPGYEHSSEIYEMMVDILGKVR 148
QPS L+ + A+ + R G P Y ++++ + +
Sbjct: 205 RGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIV----TYNVIINGMCREG 260
Query: 149 QMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN 207
++D R L +S G + V++ A +WED F E+ N T +
Sbjct: 261 RVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFD 320
Query: 208 LLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
+L+ C+ G VE A V ++ N NI I+ CK RVD+A + M +
Sbjct: 321 MLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSY 380
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
GC P ISY+T+++ CR + ELL EM + CPPN VT+ T + L + G E+A
Sbjct: 381 GCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQA 440
Query: 327 IRITEKMKIVG--------------------------------SKPDSRFFNCLIYTLGR 354
+ E+M G KP++ + L+ L
Sbjct: 441 TMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLTGLCN 500
Query: 355 ASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH-CKPN 413
A R+ A + EM + AP+ TFN +++ F G ++A ++E+M +EH C PN
Sbjct: 501 AERLDAAAELL-AEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQM--MEHGCTPN 557
Query: 414 VQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLL 473
+ T++ LL K ++E L +LL +V+ + +S DI TY+ +I L R ++ E A +
Sbjct: 558 LITYNTLLDGITKDCNSEEAL-ELLHGLVS-NGVSPDIVTYSSIIGVLSREDRVEEAIKM 615
Query: 474 F 474
F
Sbjct: 616 F 616
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 185/376 (49%), Gaps = 17/376 (4%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKG---HIVTLNTIAKVMRRFSGAGQW 184
G + S Y ++++ + K Q +L+EM +KG +IVT N I M R G+
Sbjct: 206 GCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCR---EGRV 262
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNI 242
+DA + L ++G + +T + +L LC + E +F E+ K+C+ PN TF++
Sbjct: 263 DDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCM-PNEVTFDM 321
Query: 243 FIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
+ +C+ V+ A +++M GHGC + +I + C+Q ++ L+ M + G
Sbjct: 322 LVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYG 381
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
C P+ ++YTTV+ L ++ +E+A + ++M P+ FN I L + +++A
Sbjct: 382 CSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQAT 441
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLK 422
+ + +M E+G + T+N ++ F G + A + M CKPN T+ LL
Sbjct: 442 MLIE-QMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM----PCKPNTITYTTLLT 496
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
+ D ++LL +M+ K + ++ T+ +++ C+ + A L ++M+ H
Sbjct: 497 GLCNAERLDAA-AELLAEMLQK-DCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGC 554
Query: 483 TPRYQTCRLILDEVKQ 498
TP T +LD + +
Sbjct: 555 TPNLITYNTLLDGITK 570
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 138/291 (47%), Gaps = 11/291 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++ L + + + + LL+EM + + VT NT ++ G E A +
Sbjct: 389 YTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICIL---CQKGLIEQATMLIE 445
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINR 252
++ G E N T N L++ C +G+V+ A +F + PN T+ + G C R
Sbjct: 446 QMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPC--KPNTITYTTLLTGLCNAER 503
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
+D A + EM C P V++++ ++ +C++ + EL+++M GC PN++TY T
Sbjct: 504 LDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNT 563
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN 372
++ + K + EEA+ + + G PD ++ +I L R RV+EA+ ++ + + +
Sbjct: 564 LLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHI-VQDL 622
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
G+ P +N ++ + + A M C PN T+ L++
Sbjct: 623 GMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVS-NGCMPNELTYITLIEG 672
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 101/229 (44%), Gaps = 7/229 (3%)
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
A + G P V + +I++ CR+ S +L + G +V Y T+++
Sbjct: 93 AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 152
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
+ G + A R+ M + PD+ + +I L RV EA+ + +M G
Sbjct: 153 GYCRYGQLDAARRLIASMPVA---PDAYTYTPIIRGLCDRGRVGEALSLLD-DMLHRGCQ 208
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS 435
P T+ ++ +A VL+EM + + C PN+ T++ ++ + G+ D+
Sbjct: 209 PSVVTYTVLLEAVCKSTGFGQAMEVLDEM-RAKGCTPNIVTYNVIINGMCREGRVDDARE 267
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
L + ++ + D +YT V+ GLC A + E LF EM+ + P
Sbjct: 268 FL--NRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMP 314
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 83/182 (45%), Gaps = 7/182 (3%)
Query: 326 AIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMI 385
A R+ ++ G PD LI L R R +A V + +G A D +NT++
Sbjct: 93 AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAA-ERSGTAVDVFAYNTLV 151
Query: 386 TMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKH 445
+ +G + A ++ M P+ T+ P+++ G+ E LS LLDDM+++
Sbjct: 152 AGYCRYGQLDAARRLIASM----PVAPDAYTYTPIIRGLCDRGRVGEALS-LLDDMLHRG 206
Query: 446 HLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
+ TYT+++ +C++ A + EM TP T +I++ + ++ D A
Sbjct: 207 -CQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 265
Query: 506 EK 507
+
Sbjct: 266 RE 267
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 103/223 (46%), Gaps = 7/223 (3%)
Query: 290 KVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
+ L+D ++G P+V T ++ L + G +A R+ + G+ D +N L+
Sbjct: 92 RAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLV 151
Query: 350 YTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH 409
R ++ A + MP VAPD T+ +I G +A +L++M
Sbjct: 152 AGYCRYGQLDAARRLI-ASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLH-RG 206
Query: 410 CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEW 469
C+P+V T+ LL++ K+ + + ++LD+M K + +I TY ++I+G+CR + +
Sbjct: 207 CQPSVVTYTVLLEAVCKSTGFGQAM-EVLDEMRAKG-CTPNIVTYNVIINGMCREGRVDD 264
Query: 470 AYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
A + + P + +L + ++ E++ A M
Sbjct: 265 AREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEM 307
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 138/335 (41%), Gaps = 50/335 (14%)
Query: 68 DVIISKVHVGSSEDEVFQSLKQ--DHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFR--W 123
+++I+ + D+ FQ L + C+ S+ V K + R + W+ A + +
Sbjct: 355 NIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCR-AERWEDAKELLKEMV 413
Query: 124 AGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAG 182
+CP E + + + IL + ++Q L+E+MS+ G V + T ++ F G
Sbjct: 414 RKNCPPNEVT---FNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQG 470
Query: 183 QWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTF 240
+ + A+ F + + NT T LL LC +++ A + E+ K C PN TF
Sbjct: 471 RVDSALELFYSMPC---KPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDC-APNVVTF 526
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHP---------------C-------------- 271
N+ + +C+ +DEA +++M HGC P C
Sbjct: 527 NVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVS 586
Query: 272 ------VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEE 325
+++YS+II R+ + ++ +Q G P V Y ++ L K + +
Sbjct: 587 NGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDG 646
Query: 326 AIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
AI M G P+ + LI L ++E
Sbjct: 647 AIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKE 681
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 80/171 (46%), Gaps = 8/171 (4%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK----GHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
+ ++V + MD+ L+E+M + +++T NT+ + + + E+A+
Sbjct: 526 FNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNS---EEALELLH 582
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKIN 251
L + G+ + T + ++ L +E +VE A +F ++ + P A +N + CK
Sbjct: 583 GLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRC 642
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
D A M +GC P ++Y T+I+ + + +LL E+ ++G
Sbjct: 643 NTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRG 693
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 183/373 (49%), Gaps = 13/373 (3%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KG---HIVTLNTIAKVMRRFSGAGQW 184
G+ + Y ++D L + ++D+ LLEEM+ +G + VT NT+ + G G+
Sbjct: 96 GFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNAL---LGQGRS 152
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL---KSCIPPNAHTFN 241
++A +++ G T L++ LCKEG++E A V E+ +S + P+ TFN
Sbjct: 153 KEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFN 212
Query: 242 IFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ 301
+ G CK R+ +A + GC P V++YST+I + + +LL +M
Sbjct: 213 SVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVEL 272
Query: 302 GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
GC N VTY+TV+ L K G E+A+ + +M+ G PD+ +N LI + R++EA
Sbjct: 273 GCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREA 332
Query: 362 VYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLL 421
V + + EM E G P T+ T+ G ++A +L+ M C PN T+ ++
Sbjct: 333 VGLLR-EMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAA-RGCAPNAITYSSIV 390
Query: 422 KSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHD 481
K G+ E L + M ++ + Y+ +I GLC+A K + AY + MI
Sbjct: 391 DGLCKAGRVTEALG-YFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAG 449
Query: 482 ITPRYQTCRLILD 494
P T ++++
Sbjct: 450 RIPDVVTFSILIN 462
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/422 (26%), Positives = 202/422 (47%), Gaps = 46/422 (10%)
Query: 129 GYEHSSEIYEMMVD-ILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWED 186
G ++ Y +V+ +LG+ R + +LLE+M+ G L T +++ G+ E
Sbjct: 131 GCAPNAVTYNTLVNALLGQGRSKEAF-SLLEQMAANGCPPELITFGLIIKGLCKEGEIEA 189
Query: 187 AVRTFDELGTF--GLEKNTETMNLLLDTLCKEGKVELARSVF---LELKSCIP------- 234
A R DE+ GL + T N +LD LCKE ++ A +VF LE + C P
Sbjct: 190 AFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALE-RGCRPNVVTYST 248
Query: 235 ---------------------------PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG 267
N T++ + G K+ R+++A +++M+ G
Sbjct: 249 LIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAG 308
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
C P ++Y+T+I + ++ + LL EM G P+VVTYTT+ L +SG F+EA+
Sbjct: 309 CLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAV 368
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITM 387
I + M G P++ ++ ++ L +A RV EA+ ++ + VAP ++ +I
Sbjct: 369 EILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDG 428
Query: 388 FSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHL 447
G ++A+ LE M + P+V TF L+ G+ D L +L M + +
Sbjct: 429 LCKAGKIDEAYEFLERMIRAGRI-PDVVTFSILINGLCDAGRIDTGL-ELFRGMAERGCV 486
Query: 448 SLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEK 507
D+ TY ++ LCRA++ + A+ LF++M ++P T R ++ + + + + A++
Sbjct: 487 P-DMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKR 545
Query: 508 IE 509
I+
Sbjct: 546 IQ 547
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 176/354 (49%), Gaps = 9/354 (2%)
Query: 140 MVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
M+D L K R++D+ L ++M I + T ++ + ++A F+E G
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKINRVDEA 256
T N ++D LCK G++E A +++ + + P T++ I G C+ + VD+
Sbjct: 61 CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120
Query: 257 QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSY 316
++EM G GC P ++Y+T++ + Q + + LL++M A GCPP ++T+ ++
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180
Query: 317 LAKSGDFEEAIRITEKMKIV--GSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
L K G+ E A R+ ++M ++ G PD FN ++ L + R+ +A V++ + E G
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRAL-ERGC 239
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
P+ T++T+I S ++A +L +M +L C+ N T+ ++ K G+ ++ +
Sbjct: 240 RPNVVTYSTLIDGLSKMAKMDEALQLLAKMVEL-GCRANTVTYSTVVDGLLKVGRMEDAV 298
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+L M + L D TY +I G + + A L +EM+ P T
Sbjct: 299 V-VLRQMRDAGCLP-DAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVT 350
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 189/385 (49%), Gaps = 52/385 (13%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKG---HIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++D LGK R++ + L EE +KG +VT NT+ + + G+ E+A+ +D
Sbjct: 33 YGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCK---CGRIENALTLYD 89
Query: 193 ELGT-FGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCK 249
++ FG T + L+D LC++ +V+ + E+ + C PNA T+N ++
Sbjct: 90 DMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGC-APNAVTYNTLVNALLG 148
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM----------- 298
R EA +++M +GC P +I++ II+ C++ + ++DEM
Sbjct: 149 QGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDV 208
Query: 299 --------------------------QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEK 332
+GC PNVVTY+T++ L+K +EA+++ K
Sbjct: 209 ITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAK 268
Query: 333 MKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
M +G + ++ ++ ++ L + R+++AV V + +M + G PD T+NT+I F
Sbjct: 269 MVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLR-QMRDAGCLPDAVTYNTLIDGFFKRQ 327
Query: 393 HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
+A +L EM + P+V T+ L ++G+ DE + ++LD M + + +
Sbjct: 328 RLREAVGLLREMLEAGF-HPSVVTYTTLCHGLCRSGRFDEAV-EILDYMAAR-GCAPNAI 384
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEM 477
TY+ ++ GLC+A + A F++M
Sbjct: 385 TYSSIVDGLCKAGRVTEALGYFEKM 409
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 140/275 (50%), Gaps = 5/275 (1%)
Query: 243 FIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
I G CK +VD+A ++M +P V++Y +I +Q + Y+L +E +A+G
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKI-VGSKPDSRFFNCLIYTLGRASRVQEA 361
C P VVTY T++ L K G E A+ + + M I G +P ++ LI L R V +
Sbjct: 61 CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120
Query: 362 VYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLL 421
+ + EM G AP+ T+NT++ G ++AF +LE+M C P + TF ++
Sbjct: 121 CKLLE-EMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAA-NGCPPELITFGLII 178
Query: 422 KSCFKTGKTDECLSQLLDDM-VNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH 480
K K G+ E +++D+M + + LS D+ T+ V+ GLC+ + A+ +FK +
Sbjct: 179 KGLCKEGEI-EAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALER 237
Query: 481 DITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
P T ++D + + D A ++ A M +L
Sbjct: 238 GCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVEL 272
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 134/284 (47%), Gaps = 12/284 (4%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKG----HIVTLNTIAKVMRRFSGAGQW 184
G ++ Y +VD L KV +M+ +L +M VT NT+ + F +
Sbjct: 273 GCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTL---IDGFFKRQRL 329
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSV--FLELKSCIPPNAHTFNI 242
+AV E+ G + T L LC+ G+ + A + ++ + C PNA T++
Sbjct: 330 REAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGC-APNAITYSS 388
Query: 243 FIHGWCKINRVDEAQWTIQEM-KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ 301
+ G CK RV EA ++M + P VI+YS +I C+ + YE L+ M
Sbjct: 389 IVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRA 448
Query: 302 GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
G P+VVT++ +++ L +G + + + M G PD + L+ L RASRV EA
Sbjct: 449 GRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEA 508
Query: 362 VYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMN 405
++Q +M +G++PD ST TMI E A + +E N
Sbjct: 509 FDLFQ-QMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRIQDEEN 551
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 155/344 (45%), Gaps = 26/344 (7%)
Query: 35 IVSSSPIESYCSDGARLDHHQVL-------CVDSPRLPDIDVIISKVHVGSSEDEVFQSL 87
I +S ++ C + LD H V C P + +I + + DE Q L
Sbjct: 209 ITFNSVLDGLCKEQRILDAHNVFKRALERGC--RPNVVTYSTLIDGLSKMAKMDEALQLL 266
Query: 88 KQ--DHVCNAIQPSH-YLVNKLIHRFK-DDWKSALGIFRWAGSCPGYEHSSEIYEMMVDI 143
+ + C A ++ +V+ L+ + +D L R AG P + Y ++D
Sbjct: 267 AKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLP----DAVTYNTLIDG 322
Query: 144 LGKVRQMDQMRALLEEMSKG----HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGL 199
K +++ + LL EM + +VT T+ + R +G++++AV D + G
Sbjct: 323 FFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCR---SGRFDEAVEILDYMAARGC 379
Query: 200 EKNTETMNLLLDTLCKEGKVELARSVFLELK--SCIPPNAHTFNIFIHGWCKINRVDEAQ 257
N T + ++D LCK G+V A F ++ + P+ ++ I G CK ++DEA
Sbjct: 380 APNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAY 439
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
++ M G P V+++S +I C EL M +GC P++VTY T++ L
Sbjct: 440 EFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRL 499
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
++ +EA + ++M+ G PD +I+ L +R ++A
Sbjct: 500 CRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDA 543
>gi|297819626|ref|XP_002877696.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323534|gb|EFH53955.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1188
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/412 (25%), Positives = 202/412 (49%), Gaps = 9/412 (2%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS 161
L+ +++ R D F WA PGY HS E+ + MV IL K+RQ + L+EEM
Sbjct: 102 LIVRVLSRCGDAGNLGYRFFLWATKQPGYCHSYEVCKSMVKILSKMRQFGAVWGLIEEMR 161
Query: 162 KGH--IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV 219
K + ++ ++RRF+ A + AV DE+ +G E + LLD LCK G V
Sbjct: 162 KENPELIEPELFVVLIRRFASANMVKKAVEVLDEMPKYGFEPDEYVFGCLLDALCKNGSV 221
Query: 220 ELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
+ A VF +++ IPPN F ++GWC+ ++ EA+ + +MK G P ++ ++ ++
Sbjct: 222 KDASKVFEDMREKIPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLL 281
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGD-FEEAIRITEKMKIVGS 338
Y + Y+LL++M+ +G PN YT ++ L ++ +EA+R+ +M+ G
Sbjct: 282 SGYAHAGKMADAYDLLNDMRKRGYEPNANCYTVLIQALCRTEKRMDEAMRVFVEMERYGC 341
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
+ D + LI + + + V +M + GV P T+ ++ E+
Sbjct: 342 EADIVTYTALISGFCKWGMIDKGYSVLD-DMRKKGVMPSQVTYMQILVAHEKKEQFEECL 400
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
++E+M ++ C P++ ++ +++ + E + +L ++M + LS + ++I
Sbjct: 401 ELIEKMKQI-GCHPDLLIYNVVIRLACNFREVKEAV-RLWNEM-EANGLSPGADMFVIMI 457
Query: 459 HGLCRANKCEWAYLLFKEMIGHDI--TPRYQTCRLILDEVKQKHMYDAAEKI 508
+G A FKEM+ I P+Y T + +L+ + + + A+ +
Sbjct: 458 NGFTSQGYLIEACSHFKEMVSRGIFSAPQYGTLKSLLNTLLRDDKLEMAKDV 509
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 129/265 (48%), Gaps = 12/265 (4%)
Query: 256 AQWT-IQEMKGHGCHPCVIS---YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
A W I+EM+ +P +I + +I+ + K E+LDEM G P+ +
Sbjct: 152 AVWGLIEEMRKE--NPELIEPELFVVLIRRFASANMVKKAVEVLDEMPKYGFEPDEYVFG 209
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
++ L K+G ++A ++ E M+ P+ R+F L+Y R ++ EA V V+M E
Sbjct: 210 CLLDALCKNGSVKDASKVFEDMR-EKIPPNLRYFTSLLYGWCREGKLMEAKEVL-VQMKE 267
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK-T 430
G+ PD F +++ ++H G A+ +L +M K + +PN + L+++ +T K
Sbjct: 268 AGLEPDIVVFTNLLSGYAHAGKMADAYDLLNDMRKRGY-EPNANCYTVLIQALCRTEKRM 326
Query: 431 DECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCR 490
DE + ++ + ++ DI TYT +I G C+ + Y + +M + P T
Sbjct: 327 DEAMRVFVE--MERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYM 384
Query: 491 LILDEVKQKHMYDAAEKIEAVMKKL 515
IL ++K ++ ++ MK++
Sbjct: 385 QILVAHEKKEQFEECLELIEKMKQI 409
>gi|255558584|ref|XP_002520317.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540536|gb|EEF42103.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 439
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 185/393 (47%), Gaps = 9/393 (2%)
Query: 94 NAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQM 153
N I+ S +V ++ RF++ A F WA Y HS Y M++ L K+RQ M
Sbjct: 16 NGIRVSPEIVEDVLRRFENAGMVAYRFFEWAEKQLHYTHSVRAYHTMIESLAKIRQYQIM 75
Query: 154 RALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTL 213
L+ M + ++ + T +MR+++ A + E+AV TF+ + + + N N L L
Sbjct: 76 WDLINAMKRKRMLNVETFCIIMRKYARAQKLEEAVYTFNVMEKYDVPPNLAAFNGLFSAL 135
Query: 214 CKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI 273
CK V A+ +F K P++ T+ I + GW K + +A+ +EM GC P ++
Sbjct: 136 CKSKNVRKAQEIFDSSKDRFVPDSKTYTILLEGWGKTPNLPKAREIFREMVDVGCSPDIV 195
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
+Y ++ C+ + +++ EM C P Y+ ++ E+A+ M
Sbjct: 196 TYGIMVDILCKAGRVDEALDIVKEMDLTICKPTSFIYSVLIHTYGIENRIEDAVDTFLGM 255
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV--EMPENGVAPDTSTFNTMITMFSHH 391
+ G K D +N LI G +V + VY+V EM G+ P++ T N ++
Sbjct: 256 EKNGVKADVAAYNALI---GAFCKVNKFKNVYRVLNEMDYKGMQPNSRTLNIILNNLIAR 312
Query: 392 GHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDI 451
G ++AF V M K+ C+P+ T+ ++K + + + L + + K H +
Sbjct: 313 GETDEAFRVFRRMIKV--CEPDADTYTMMIKMFCERNELEMALK--VWKYMKKKHFVPSM 368
Query: 452 TTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
T++++I+GLC A ++ ++MI I P
Sbjct: 369 HTFSVLINGLCEEGDVSHACVMLEDMIEKGIRP 401
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 115/246 (46%), Gaps = 9/246 (3%)
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI-- 329
V ++ I++ Y R + + M+ PPN+ + + S L KS + +A I
Sbjct: 90 VETFCIIMRKYARAQKLEEAVYTFNVMEKYDVPPNLAAFNGLFSALCKSKNVRKAQEIFD 149
Query: 330 TEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFS 389
+ K + V PDS+ + L+ G+ + +A +++ EM + G +PD T+ M+ +
Sbjct: 150 SSKDRFV---PDSKTYTILLEGWGKTPNLPKAREIFR-EMVDVGCSPDIVTYGIMVDILC 205
Query: 390 HHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSL 449
G ++A +++EM+ L CKP + L+ + + ++ + L + K+ +
Sbjct: 206 KAGRVDEALDIVKEMD-LTICKPTSFIYSVLIHTYGIENRIEDAVDTFLG--MEKNGVKA 262
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIE 509
D+ Y +I C+ NK + Y + EM + P +T +IL+ + + D A ++
Sbjct: 263 DVAAYNALIGAFCKVNKFKNVYRVLNEMDYKGMQPNSRTLNIILNNLIARGETDEAFRVF 322
Query: 510 AVMKKL 515
M K+
Sbjct: 323 RRMIKV 328
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 99/209 (47%), Gaps = 1/209 (0%)
Query: 133 SSEIYEMMVDILG-KVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTF 191
+S IY +++ G + R D + L G + ++ F ++++ R
Sbjct: 228 TSFIYSVLIHTYGIENRIEDAVDTFLGMEKNGVKADVAAYNALIGAFCKVNKFKNVYRVL 287
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKIN 251
+E+ G++ N+ T+N++L+ L G+ + A VF + P+A T+ + I +C+ N
Sbjct: 288 NEMDYKGMQPNSRTLNIILNNLIARGETDEAFRVFRRMIKVCEPDADTYTMMIKMFCERN 347
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
++ A + MK P + ++S +I C + + S +L++M +G P+ VT+
Sbjct: 348 ELEMALKVWKYMKKKHFVPSMHTFSVLINGLCEEGDVSHACVMLEDMIEKGIRPSGVTFG 407
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
+ L K G + + +K+ ++ +P
Sbjct: 408 RLRHLLIKEGREDVLEFLQQKINVLIKEP 436
>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
Length = 436
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/349 (30%), Positives = 180/349 (51%), Gaps = 5/349 (1%)
Query: 130 YEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVR 189
++ + Y +++ L K+ ++++ R L+E+M++ T ++ R + +DA+
Sbjct: 76 FKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAPPDALTYGPIVERLCKTKRIDDALA 135
Query: 190 TFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWC 248
T +E+ T G++ + N +L LC+E KVE AR +F ++ K I PN T+N I+G C
Sbjct: 136 TVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLC 195
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
K R++ A +EM G G P +SY+T+I +C++ + ++ D+M C PNVV
Sbjct: 196 KAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVV 255
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
TYTT++ L+KSG + A + + M G P+ ++CLI + RV EA + + +
Sbjct: 256 TYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLE-Q 314
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M G+AP T+N ++ E AF + M + C P V T++ LL++
Sbjct: 315 MVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQ-RRCHPTVVTYNTLLRALCHHK 373
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
+ D +L +M+ K D TY + GL RA K A L ++M
Sbjct: 374 QLDGA-HRLYAEMIAK-GCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 420
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 178/381 (46%), Gaps = 5/381 (1%)
Query: 133 SSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTF 191
+ + + D K +++Q++ + + M G+ + + ++ G +++A +
Sbjct: 9 GAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLL 68
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKIN 251
+ ++ + +++ LCK +VE AR + ++ PP+A T+ + CK
Sbjct: 69 HTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAPPDALTYGPIVERLCKTK 128
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
R+D+A T++EM G P Y+ ++ C++ + L ++M Q PNVVTY
Sbjct: 129 RIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYN 188
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
T+++ L K+ E A + ++M G P +N LI + + A V+ +M
Sbjct: 189 TLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFD-KMVR 247
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
+ P+ T+ T+I S G + A VL+ M K + PNV T+ L+ K + D
Sbjct: 248 SNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVK-KGVTPNVATYSCLIDGFCKVRRVD 306
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRL 491
E +LL+ MV ++ + TY ++++ LCRA+K E A+ LF+ M P T
Sbjct: 307 EA-HKLLEQMVT-QGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNT 364
Query: 492 ILDEVKQKHMYDAAEKIEAVM 512
+L + D A ++ A M
Sbjct: 365 LLRALCHHKQLDGAHRLYAEM 385
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 126/253 (49%), Gaps = 7/253 (2%)
Query: 96 IQPSHYLVNKLIHRFKDDWK--SALGIFR-WAGSCPGYEHSSEIYEMMVDILGKVRQMDQ 152
I P+ N LI+ W+ +A +F+ AG GY + Y ++D K + +
Sbjct: 180 INPNVVTYNTLINGLCKAWRIETAYELFKEMAGK--GYVPTEVSYNTLIDGFCKKKDLVA 237
Query: 153 MRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLD 211
+ + ++M + + V + T ++ S +G+ + A D + G+ N T + L+D
Sbjct: 238 AKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLID 297
Query: 212 TLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHP 270
CK +V+ A + ++ + I P T+NI ++ C+ +++++A + M CHP
Sbjct: 298 GFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHP 357
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRIT 330
V++Y+T++++ C + L EM A+GCPP+ +TY T+ L ++G EA +
Sbjct: 358 TVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELM 417
Query: 331 EKMKIVGSKPDSR 343
EKMK+ P R
Sbjct: 418 EKMKLTKRNPFGR 430
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 135/283 (47%), Gaps = 6/283 (2%)
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
+ P A TFN G+ K R+++ + Q M G Y +I C+ NF + Y
Sbjct: 6 VIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAY 65
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
+LL M+ + + Y+T++++L K EEA + EKM + PD+ + ++ L
Sbjct: 66 KLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARY-APPDALTYGPIVERL 124
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
+ R+ +A+ + EM G+ PD +N +++ E+A + E+M K + P
Sbjct: 125 CKTKRIDDALATVE-EMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVK-QRINP 182
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
NV T++ L+ K + E +L +M K ++ ++ +Y +I G C+ A
Sbjct: 183 NVVTYNTLINGLCKAWRI-ETAYELFKEMAGKGYVPTEV-SYNTLIDGFCKKKDLVAAKD 240
Query: 473 LFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEAVMKK 514
+F +M+ + P T ++D + K + AAE ++ ++KK
Sbjct: 241 VFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKK 283
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 192/368 (52%), Gaps = 6/368 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +++D L KV + D+ + L EEM ++G I + + + ++ F AG+W+ + FDE+
Sbjct: 240 YSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMV 299
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRVD 254
G++ + T ++L+DTLCKEGKV A+ + + ++ I PN T+N I G+C + ++
Sbjct: 300 DQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLN 359
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
A+ M G P ISY+T+I YC+ + + L +EM G PNV TY T++
Sbjct: 360 SARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLL 419
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
L + G +A ++ MK G +S+ + + L + + EA+ ++ E+
Sbjct: 420 KGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFN-ELKSYNF 478
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
+ ++ +I G E A+ + E++++ E +P+V T++ ++ K G+ D
Sbjct: 479 KLNIENYSCLIDGLCKAGKLETAWELFEKLSQ-EGLQPDVVTYNIMIHGFCKVGQVDN-- 535
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
+ +L + + ++ + DI Y ++ G C NK E L +M+ D++P +C +++D
Sbjct: 536 ANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVD 595
Query: 495 EVKQKHMY 502
+ + Y
Sbjct: 596 MLCKDEKY 603
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 178/387 (45%), Gaps = 44/387 (11%)
Query: 148 RQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN 207
R + + A+ + +G+I + T +++ + +A R F + G N T
Sbjct: 141 RVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYG 200
Query: 208 LLLDTLCKEGKVELARSVFLEL--------KSCIPPNAHTFNIFIHGWCKINRVDEAQWT 259
L+ LC+ G V +A + E+ +C P T++I I G CK+ R DEA+
Sbjct: 201 TLIKGLCQTGNVNIALKLHKEMLNDASQYGVNC-KPGVITYSIIIDGLCKVGREDEAKEL 259
Query: 260 IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK 319
+EMK G P VISYST+I +C + + L DEM QG P++VT++ ++ L K
Sbjct: 260 FEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCK 319
Query: 320 SGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTS 379
G EA ++ E M G P+ +N LI + A ++ + MP G+ PD
Sbjct: 320 EGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELF-LSMPSKGLEPDEI 378
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKT--------- 430
++ T+I + ++A ++ EM ++ PNV T+ LLK F+ GK
Sbjct: 379 SYTTLINGYCKTWKVKEAMNLYNEMLQVGK-SPNVTTYGTLLKGLFQKGKVGDAKKLFGV 437
Query: 431 ----------------------DECLSQLLD--DMVNKHHLSLDITTYTLVIHGLCRANK 466
++CL + ++ + + ++ L+I Y+ +I GLC+A K
Sbjct: 438 MKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGK 497
Query: 467 CEWAYLLFKEMIGHDITPRYQTCRLIL 493
E A+ LF+++ + P T +++
Sbjct: 498 LETAWELFEKLSQEGLQPDVVTYNIMI 524
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 169/362 (46%), Gaps = 12/362 (3%)
Query: 160 MSKGH-IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
M + H I +++ +++ + + ++E+ GL + T+++L + LC +
Sbjct: 82 MMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNR 141
Query: 219 VELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
V A + L+ PN T+ I G C +R+ EA M+ GC P ++Y T
Sbjct: 142 VSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGT 201
Query: 278 IIQSYCRQYNFSKVYELLDEM------QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
+I+ C+ N + +L EM C P V+TY+ ++ L K G +EA + E
Sbjct: 202 LIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFE 261
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHH 391
+MK G PD ++ LI+ A + ++ +++ EM + GV PD TF+ +I
Sbjct: 262 EMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFD-EMVDQGVQPDMVTFSVLIDTLCKE 320
Query: 392 GHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDI 451
G +A +LE M + PN+ T++ L+ G + +L M +K L D
Sbjct: 321 GKVTEAKKLLEVMIQ-RGIVPNLITYNSLIDGFCMVGDLNSA-RELFLSMPSKG-LEPDE 377
Query: 452 TTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAV 511
+YT +I+G C+ K + A L+ EM+ +P T +L + QK A+K+ V
Sbjct: 378 ISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGV 437
Query: 512 MK 513
MK
Sbjct: 438 MK 439
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 148/321 (46%), Gaps = 45/321 (14%)
Query: 41 IESYCSDGARLDHHQVLCVDSPR--LPDI----DVIISKVHVG--SSEDEVFQSLKQDHV 92
I++ C +G + ++L V R +P++ +I VG +S E+F S+
Sbjct: 314 IDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPS--- 370
Query: 93 CNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQ 152
++P LI+ + WK + + +Y M+ + GK +
Sbjct: 371 -KGLEPDEISYTTLINGYCKTWK--------------VKEAMNLYNEMLQV-GKSPNVTT 414
Query: 153 MRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWE----------------DAVRTFDELG 195
LL+ + KG + + VM+ + + + +A+ F+EL
Sbjct: 415 YGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELK 474
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
++ + N E + L+D LCK GK+E A +F +L + + P+ T+NI IHG+CK+ +VD
Sbjct: 475 SYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVD 534
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
A ++M+ +GC P +I+Y+T++ +C +V +LL +M + PN + T V+
Sbjct: 535 NANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVV 594
Query: 315 SYLAKSGDFEEAIRITEKMKI 335
L K +++ + + K +
Sbjct: 595 DMLCKDEKYKKFVDLLPKFPV 615
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 128/275 (46%), Gaps = 3/275 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++D V ++ R L M SKG + ++ + + ++A+ ++E+
Sbjct: 345 YNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEML 404
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVD 254
G N T LL L ++GKV A+ +F +K+ + N+ + IF+ G CK + +
Sbjct: 405 QVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLF 464
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA E+K + + +YS +I C+ +EL +++ +G P+VVTY ++
Sbjct: 465 EAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMI 524
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
K G + A + EKM+ G PD +N L+ ++++E + + +M + V
Sbjct: 525 HGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLH-KMVQKDV 583
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH 409
+P+ ++ ++ M ++K +L + H
Sbjct: 584 SPNAASCTIVVDMLCKDEKYKKFVDLLPKFPVQRH 618
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 135/306 (44%), Gaps = 44/306 (14%)
Query: 214 CKEGKVELARSV-FLEL---KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCH 269
CK G + ++ F +L IPP +FN + G KIN + EM+ G
Sbjct: 65 CKTGNITAIQAFHFFDLMMRSHPIPP-ISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLS 123
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEMQA---QGCPPNVVTYTTVMSYLAKSGDFEEA 326
P + + S + C N ++V E L M +G PNVVTYTT++ L EA
Sbjct: 124 PDLFTLSILANCLC---NVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEA 180
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
R+ +M+ +G P++ + LI L + V A+ +++ M+
Sbjct: 181 TRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHK----------------EMLN 224
Query: 387 MFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHH 446
S +G +CKP V T+ ++ K G+ DE +L ++M +
Sbjct: 225 DASQYG---------------VNCKPGVITYSIIIDGLCKVGREDEA-KELFEEMKAQGM 268
Query: 447 LSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAE 506
+ D+ +Y+ +IHG C A K + + LF EM+ + P T +++D + ++ A+
Sbjct: 269 IP-DVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAK 327
Query: 507 KIEAVM 512
K+ VM
Sbjct: 328 KLLEVM 333
>gi|255541126|ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548807|gb|EEF50296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1163
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 192/376 (51%), Gaps = 17/376 (4%)
Query: 117 ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNT----IA 172
AL F WA G+ H+ + Y +M++ILG+ R ++ R L + + T+
Sbjct: 102 ALQFFNWAPEL-GFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRRSNGTVKLEDRFFN 160
Query: 173 KVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC 232
++R + AG ++++V+ F+ + + G+ + T N LL L K G+ +A+SVF E+ S
Sbjct: 161 SLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEMLST 220
Query: 233 --IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSK 290
+ P+ +TFNI I G+CK + VDE +EM C P +++Y+T++ CR +
Sbjct: 221 YGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKVNI 280
Query: 291 VYELLDEM--QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
+ +++ M ++ P+VVTYTT++ + +EA+ + E+M G KP+ +N L
Sbjct: 281 AHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYNTL 340
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
I L ++ + +++ + G PDT T NT++ + G+ A V E+M L
Sbjct: 341 IKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMVL- 399
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLD------ITTYTLVIHGLC 462
+ +P+ T+ L+++ + G + QL D++ K L D + Y + LC
Sbjct: 400 NVRPDSATYSVLIRNLCQRGNFERA-EQLFDELSEKEILLRDDGCTPLVAAYKSMFEFLC 458
Query: 463 RANKCEWAYLLFKEMI 478
R K A +F++++
Sbjct: 459 RNGKTAKAERVFRQLM 474
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 107/204 (52%), Gaps = 10/204 (4%)
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM 369
+ +++ K+G F+E++++ MK VG P FN L+ L + R A V+ +
Sbjct: 159 FNSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEML 218
Query: 370 PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
GV PDT TFN +I F + ++ F +EM++ + C P++ T++ L+ + GK
Sbjct: 219 STYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFK-CDPDLVTYNTLVDGLCRAGK 277
Query: 430 TDECLSQLLDDMVNKH-HLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR--- 485
+ +++ MV K +L+ D+ TYT ++ G C ++ + A ++F+EM+ + P
Sbjct: 278 VN-IAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEIT 336
Query: 486 YQTCRLILDEVKQ----KHMYDAA 505
Y T L EV++ K +++ A
Sbjct: 337 YNTLIKGLCEVQKIDKIKQIFEGA 360
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 158/362 (43%), Gaps = 22/362 (6%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM--SKGHIVTLNTIAKVMRRFSGAGQWED 186
G + + Y ++ L +V+++D+++ + E G I T+ +M AG D
Sbjct: 329 GLKPNEITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLND 388
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK---------SCIPPNA 237
A+ F+++ + ++ T ++L+ LC+ G E A +F EL C P A
Sbjct: 389 ALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRDDGCTPLVA 448
Query: 238 HTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDE 297
++F C+ + +A+ +++ G +S+ +I+ +CR+ F YELL
Sbjct: 449 AYKSMF-EFLCRNGKTAKAERVFRQLMKRGTQDP-LSFKILIKGHCREGTFEAGYELLVL 506
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPD-SRFFNCLIYTLGRAS 356
M + P++ TY +++ L + G+ A + EKM P+ S F + L L +
Sbjct: 507 MLRRDFVPDLETYQSLIDGLLQKGEPLVAYQTLEKMIKSSHVPETSTFHSILARLLAKGC 566
Query: 357 RVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQT 416
+ A ++ + M E + + + + + G +KAF ++ L + V
Sbjct: 567 AHESARFI--MLMLEGKIRQNINLSTHTVRLLFGSGLRDKAFKIV----GLLYANGYVVD 620
Query: 417 FHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKE 476
L+ F + L+ L + H ++DI VI GLC+ + A+ L+ E
Sbjct: 621 MEELIG--FLSHNRKFLLAHKLLLFCLEKHQNVDIDMCDTVIEGLCKMKRHSEAFGLYYE 678
Query: 477 MI 478
++
Sbjct: 679 LV 680
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/382 (27%), Positives = 190/382 (49%), Gaps = 20/382 (5%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
++++++ L KV + + ++E+M ++T NTI + + AG+ A
Sbjct: 232 FDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTI---IDGYCKAGKMFKADALLK 288
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKIN 251
E+ + N T N+L+D C++ V A+ VF E+ + + PN T+N I+G C
Sbjct: 289 EMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNG 348
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
++DEA +M G G P V++Y+ +I +C++ + E+LD++ +G PNV+T+
Sbjct: 349 KLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFN 408
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
T++ K+G ++A + M G P+ +NCLI R V+EA + + EM
Sbjct: 409 TLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAK-EMEG 467
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
NG+ D T+N ++ G KA +L+EM ++ P+ T++ L+ F+ G +
Sbjct: 468 NGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEV-GLNPSHLTYNALIDGYFREGNST 526
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRL 491
L+ + ++ K +I TY ++I G C K E A L EM+ + P T +
Sbjct: 527 AALN--VRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDI 584
Query: 492 ILDEVKQK--------HMYDAA 505
+ DE+ +K H+Y+ +
Sbjct: 585 LRDEMMEKGFIPDIDGHLYNVS 606
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 116/448 (25%), Positives = 209/448 (46%), Gaps = 58/448 (12%)
Query: 121 FRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTI---AKVMRR 177
F+W G H+ E + ++ +L + +++RALL+ +K + +TI V+
Sbjct: 94 FKWTQKEFGAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSNSTIFHSLSVLGS 153
Query: 178 FSGA---------------GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELA 222
+ A G+ + A+ FD G +G + + N +L +L KEG++ +
Sbjct: 154 WGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVV 213
Query: 223 RSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQS 281
SV+ E+ + I N TF++ I+G CK+ + +A +++MK G P VI+Y+TII
Sbjct: 214 ESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDG 273
Query: 282 YC-----------------------------------RQYNFSKVYELLDEMQAQGCPPN 306
YC R N + ++ +EMQ QG PN
Sbjct: 274 YCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPN 333
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
VVTY ++++ L +G +EA+ + +KM +G KP+ +N LI + ++EA +
Sbjct: 334 VVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLD 393
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
++ + G+AP+ TFNT+I + G + AF + M C PNV T++ L+ +
Sbjct: 394 -DIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVC-PNVSTYNCLIVGFCR 451
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
G E ++ L + + L D+ TY +++ LC+ + A L EM + P +
Sbjct: 452 EGNVKE--ARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSH 509
Query: 487 QTCRLILDEVKQKHMYDAAEKIEAVMKK 514
T ++D ++ AA + +M+K
Sbjct: 510 LTYNALIDGYFREGNSTAALNVRTLMEK 537
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 149/307 (48%), Gaps = 14/307 (4%)
Query: 86 SLKQDHVCNAIQPSHYLVNKLIHRF-KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDIL 144
+L ++ V I P+ N LI F +D+ +A G + + Y +++ L
Sbjct: 285 ALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGL 344
Query: 145 GKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLE 200
++D+ L ++MS K ++VT N + + F ++A D++G GL
Sbjct: 345 CSNGKLDEALGLQDKMSGMGLKPNVVTYNAL---INGFCKKKMLKEAREMLDDIGKRGLA 401
Query: 201 KNTETMNLLLDTLCKEGKVE---LARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQ 257
N T N L+D K G+++ L RS+ L+ C PN T+N I G+C+ V EA+
Sbjct: 402 PNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVC--PNVSTYNCLIVGFCREGNVKEAR 459
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
+EM+G+G +++Y+ ++ + C++ K LLDEM G P+ +TY ++
Sbjct: 460 KLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGY 519
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
+ G+ A+ + M+ G + + +N LI +++EA + EM E G+ P+
Sbjct: 520 FREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLN-EMLEKGLIPN 578
Query: 378 TSTFNTM 384
+T++ +
Sbjct: 579 RTTYDIL 585
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 115/354 (32%), Positives = 174/354 (49%), Gaps = 7/354 (1%)
Query: 126 SCPGYEHSSEIYEMMVDILGKVRQMDQMRA-LLEEMSKGHIVTLNTIAKVMRRFSGAGQW 184
SC G Y ++ L K +M++ LLE +G T + +S G+
Sbjct: 500 SCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKM 559
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIF 243
+A + FDE+ GL N +L++ K G + A S+F L + + P+ T + F
Sbjct: 560 TEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAF 619
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
IHG K RV EA E+K G P V +YS++I +C+Q K +EL DEM +G
Sbjct: 620 IHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGI 679
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
PN+ Y ++ L KSGD + A ++ + M G +PDS ++ +I ++ V EA
Sbjct: 680 APNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFS 739
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
++ EMP GV P + +N ++ G EKA ++ EM L+ +F+ L+
Sbjct: 740 LFH-EMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREM--LQKGFATTLSFNTLIDG 796
Query: 424 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
K+ K E SQL +M+ K + D TYT VI C+A K E A LLFKEM
Sbjct: 797 YCKSCKIQEA-SQLFQEMIAKQIMP-DHVTYTTVIDWHCKAGKMEEANLLFKEM 848
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 190/388 (48%), Gaps = 6/388 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDA 187
G + IY ++++ + +V +D+ L M KG + T + A + +A
Sbjct: 258 GLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEA 317
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHG 246
TF+E+ GL+ + + L+D +EG ++ + + SC IP N T+N+ IHG
Sbjct: 318 KLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHG 377
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
CK ++++A ++ M GC P ++ +I+ YCR++N + ELLDEM+ + P+
Sbjct: 378 LCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPS 437
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
V+Y +++ L D A ++ EKM G KP+ ++ LI R++EA +
Sbjct: 438 AVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLD 497
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
M +GVAPD +N +I+ S G E+A L E+ KP+ TF + K
Sbjct: 498 -GMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQG-RGLKPDAVTFGAFILGYSK 555
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
TGK E ++ D+M++ H L + YT++I+G +A A +F+ + + P
Sbjct: 556 TGKMTEA-AKYFDEMLD-HGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDV 613
Query: 487 QTCRLILDEVKQKHMYDAAEKIEAVMKK 514
QTC + + + A K+ + +K+
Sbjct: 614 QTCSAFIHGLLKNGRVQEALKVFSELKE 641
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 188/399 (47%), Gaps = 42/399 (10%)
Query: 133 SSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTF 191
S+ Y M++ L + + LLE+M+ G + + ++ ++ G+ E+A R
Sbjct: 437 SAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLL 496
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKI 250
D + G+ + N ++ L K GK+E A + LE++ + P+A TF FI G+ K
Sbjct: 497 DGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKT 556
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYN-------FSKVYEL--------- 294
++ EA EM HG P Y+ +I + + N F +++ L
Sbjct: 557 GKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTC 616
Query: 295 -------------------LDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKI 335
E++ +G P+V TY++++S K G+ E+A + ++M +
Sbjct: 617 SAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCL 676
Query: 336 VGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHE 395
G P+ +N L+ L ++ +Q A ++ MPE G+ PD+ T++TMI + +
Sbjct: 677 KGIAPNIFIYNALVDGLCKSGDIQRARKLFD-GMPEKGLEPDSVTYSTMIDGYCKSENVA 735
Query: 396 KAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYT 455
+AF + EM + +P+ ++ L+ C K G ++ ++ L +M+ K + ++
Sbjct: 736 EAFSLFHEMPS-KGVQPHSFVYNALVHGCCKEGDMEKAMN-LFREMLQKGFAT--TLSFN 791
Query: 456 LVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
+I G C++ K + A LF+EMI I P + T ++D
Sbjct: 792 TLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVID 830
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 162/335 (48%), Gaps = 6/335 (1%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTF 240
G+ ++A++ F EL GL + T + L+ CK+G+VE A + E+ I PN +
Sbjct: 627 GRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIY 686
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
N + G CK + A+ M G P ++YST+I YC+ N ++ + L EM +
Sbjct: 687 NALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPS 746
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
+G P+ Y ++ K GD E+A+ + +M G + FN LI ++ ++QE
Sbjct: 747 KGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFAT-TLSFNTLIDGYCKSCKIQE 805
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
A ++Q EM + PD T+ T+I G E+A + +EM + + + T+ L
Sbjct: 806 ASQLFQ-EMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQE-RNLIVDTVTYTSL 863
Query: 421 LKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH 480
+ K G++ E + L + MV K + D TY LVI+ C+ + A+ L E++G
Sbjct: 864 MYGYNKLGQSSEVFA-LFEKMVAKG-VKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGK 921
Query: 481 DITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
+ + L++ + ++ A K+ M +L
Sbjct: 922 GMLTKGTIHDLLITALCKREDLTEASKLLDEMGEL 956
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 157/344 (45%), Gaps = 5/344 (1%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
IY +VD L K + + R L + M KG T + ++ + + +A F E+
Sbjct: 685 IYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEM 744
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVD 254
+ G++ ++ N L+ CKEG +E A ++F E+ +FN I G+CK ++
Sbjct: 745 PSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQ 804
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA QEM P ++Y+T+I +C+ + L EMQ + + VTYT++M
Sbjct: 805 EASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLM 864
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
K G E + EKM G KPD + +IY + + EA + + E+ G+
Sbjct: 865 YGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEA-FKLRDEVVGKGM 923
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
+ + +IT +A +L+EM +L KP++ + L++S + GK DE
Sbjct: 924 LTKGTIHDLLITALCKREDLTEASKLLDEMGEL-GLKPSLAACNTLVRSFHEAGKMDEAT 982
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
+ V L D TT +++G E A L K+++
Sbjct: 983 RVF--EGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 1024
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 100/414 (24%), Positives = 178/414 (42%), Gaps = 26/414 (6%)
Query: 91 HVCNAIQPSHYLVNKLIHRFK-DDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQ 149
H+ + + P ++ ++H+ + D K L F W+ S G + + ++ L
Sbjct: 64 HIPSKLNPD--VIRAVLHQNQVGDPKRLLDFFYWSQSQMGVPQFLDSFSILAVQLCNSEL 121
Query: 150 MDQMRALLEEMSKGHIVTLNTIAKVM---RRFSGAGQ--WEDAVRTFDELG-------TF 197
+L +M + + + + V+ R + G+ ++ + ++ +G F
Sbjct: 122 FGLANGVLTQMIRTPYSSSSILDSVLFWFRNYGGSSPVVFDILIDSYKRMGMLDEAANVF 181
Query: 198 GLEKNTETM------NLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKI 250
+ KN + N LL L K G +EL V+ L + + + +T+ + CK
Sbjct: 182 FVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKT 241
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
+ A+ + EM G +P YS +I+ C+ + + EL M +G PN TY
Sbjct: 242 GDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTY 301
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
T + + L ++ EA E+M+ G KPD + LI R + E + + V M
Sbjct: 302 TIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDV-MV 360
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKT 430
G+ + T+N +I G EKA +L+ M L CKPN +TF L++ +
Sbjct: 361 SCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTL-GCKPNSRTFCLLIEGYCREHNM 419
Query: 431 DECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
L +LLD+M K +L +Y +I+GLC A L ++M + P
Sbjct: 420 GRAL-ELLDEM-EKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKP 471
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 133/277 (48%), Gaps = 2/277 (0%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAV 188
G + S +Y +V K M++ L EM + T + ++ + + + ++A
Sbjct: 748 GVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEAS 807
Query: 189 RTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGW 247
+ F E+ + + T ++D CK GK+E A +F E++ + + T+ ++G+
Sbjct: 808 QLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGY 867
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
K+ + E ++M G P ++Y +I ++C++ N + ++L DE+ +G
Sbjct: 868 NKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKG 927
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
+ +++ L K D EA ++ ++M +G KP N L+ + A ++ EA V++
Sbjct: 928 TIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFE- 986
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
+ G+ PDT+T ++ + E A ++++++
Sbjct: 987 GVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQL 1023
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 182/351 (51%), Gaps = 11/351 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y MV Q+D R L+ EM + T NT+ +R G G+ +A+ DE+
Sbjct: 3 YNAMVAGYCGAGQLDAARRLVAEMPVEPDAYTYNTL---IRGLCGRGRTANALAVLDEML 59
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRV 253
+ T +LL+ CK + A + E+ K C P + T+N+ ++G C+ RV
Sbjct: 60 RRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTP-DIVTYNVVVNGICQEGRV 118
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
D+A ++ + +GC P +SY+ +++ C + EL+ EM +GCPPNVVT+ +
Sbjct: 119 DDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNML 178
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
+S+L + G E A+ + E++ G P+S +N L++ + ++ +A+ + M G
Sbjct: 179 ISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDL-MVSRG 237
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
PD ++NT++T G + A +L ++ K + C P + +++ ++ K GKT E
Sbjct: 238 CYPDIVSYNTLLTALCRSGEVDVAVELLHQL-KDKGCAPVLISYNTVIDGLTKAGKTKEA 296
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
L +LL++MV+K L DI TY+ + GLCR ++ E A F ++ I P
Sbjct: 297 L-ELLNEMVSK-GLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRP 345
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 148/283 (52%), Gaps = 13/283 (4%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KG---HIVTLNTIAKVMRRFSGAGQW 184
G E ++ Y +++ L + + L+ EM KG ++VT N + + R G
Sbjct: 132 GCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCR---KGLV 188
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL---KSCIPPNAHTFN 241
E A+ +++ +G N+ + N LL CK+ K++ A + FL+L + C P + ++N
Sbjct: 189 EPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMA-FLDLMVSRGCYP-DIVSYN 246
Query: 242 IFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ 301
+ C+ VD A + ++K GC P +ISY+T+I + + ELL+EM ++
Sbjct: 247 TLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSK 306
Query: 302 GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
G P+++TY+T+ + L + E+AIR K++ +G +P++ +N +I L + A
Sbjct: 307 GLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSA 366
Query: 362 VYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
+ ++ M NG P+ ST+ +I ++ G ++A +L+E+
Sbjct: 367 IDLFAY-MIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDEL 408
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 74/147 (50%), Gaps = 6/147 (4%)
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKT 427
EMP V PD T+NT+I G A VL+EM + C P+V T+ LL++ K
Sbjct: 25 EMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLR-RRCVPDVVTYTILLEATCKR 80
Query: 428 GKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
+ + +LLD+M +K + DI TY +V++G+C+ + + A K + + P
Sbjct: 81 SGYKQAM-KLLDEMRDKG-CTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTV 138
Query: 488 TCRLILDEVKQKHMYDAAEKIEAVMKK 514
+ ++L + ++ AE++ M +
Sbjct: 139 SYNIVLKGLCTAERWEDAEELMGEMGQ 165
>gi|357520891|ref|XP_003630734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524756|gb|AET05210.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 520
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/426 (26%), Positives = 216/426 (50%), Gaps = 12/426 (2%)
Query: 95 AIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMR 154
+ Q S LV +++ R SA F WA S PG++HS + + ++V+ILG+ +Q +
Sbjct: 68 STQISTDLVEQVLKRCNHLGFSAHRFFLWAKSIPGFQHSVQSFHILVEILGRSKQFAILW 127
Query: 155 ALLEEMSKGHI---VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLD 211
L E + +T + +S A + A+R+F + FG++ + ++LLL
Sbjct: 128 DFLIETRESDSSCKITNEIFWIIFTAYSRADLPDGAIRSFVRMDEFGIKPSIIDVDLLLY 187
Query: 212 TLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPC 271
TLCK+ V A+ F ++KS T++I I+GW KI +A+ M GCH
Sbjct: 188 TLCKKKHVRQAQQFFDQVKSHFLLTTKTYSILINGWGKIGDSGKARELFDAMLEQGCHVD 247
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
+++Y+ ++++ C+ + + + L++M ++ P+ TY+ + + + A + +
Sbjct: 248 LLAYNNLLEALCKGGHVDEAMDFLNDMLSKKVEPDAFTYSIFIRSYCDANNVHSAFGVLD 307
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV--EMPENGVAPDTSTFNTMITMFS 389
KM+ P+ +NC+I L + +V+EA YQ+ EM +G+ PDT ++N +
Sbjct: 308 KMRRCNLLPNVFTYNCIIKRLCKIKKVEEA---YQLLDEMISSGLKPDTWSYNAIQAYHC 364
Query: 390 HHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSL 449
H +A ++ M K + C P+ T++ +LK + G+ D+ +++ + M +K
Sbjct: 365 DHCEVNRALKLISRMEK-DVCFPDRHTYNMVLKLLIRIGRFDKA-TEVWECMGDKKFYP- 421
Query: 450 DITTYTLVIHGLC-RANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
++TY+++IHGLC + K E A F MI I P T ++ + + + D E +
Sbjct: 422 SVSTYSVMIHGLCKKKGKLEEACKYFAMMIDEGIPPYDTTIEMLRNRLLGLGLLDNIEIL 481
Query: 509 EAVMKK 514
A M++
Sbjct: 482 AAKMRQ 487
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 115/354 (32%), Positives = 174/354 (49%), Gaps = 7/354 (1%)
Query: 126 SCPGYEHSSEIYEMMVDILGKVRQMDQMRA-LLEEMSKGHIVTLNTIAKVMRRFSGAGQW 184
SC G Y ++ L K +M++ LLE +G T + +S G+
Sbjct: 411 SCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKM 470
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIF 243
+A + FDE+ GL N +L++ K G + A S+F L + + P+ T + F
Sbjct: 471 TEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAF 530
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
IHG K RV EA E+K G P V +YS++I +C+Q K +EL DEM +G
Sbjct: 531 IHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGI 590
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
PN+ Y ++ L KSGD + A ++ + M G +PDS ++ +I ++ V EA
Sbjct: 591 APNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFS 650
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
++ EMP GV P + +N ++ G EKA ++ EM L+ +F+ L+
Sbjct: 651 LFH-EMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREM--LQKGFATTLSFNTLIDG 707
Query: 424 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
K+ K E SQL +M+ K + D TYT VI C+A K E A LLFKEM
Sbjct: 708 YCKSCKIQEA-SQLFQEMIAKQIMP-DHVTYTTVIDWHCKAGKMEEANLLFKEM 759
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 184/373 (49%), Gaps = 8/373 (2%)
Query: 143 ILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKN 202
IL + + + +R++ E KG + T + A + +A TF+E+ GL+ +
Sbjct: 187 ILISLIRCNSLRSMGE---KGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPD 243
Query: 203 TETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQ 261
+ L+D +EG ++ + + SC IP N T+N+ IHG CK ++++A ++
Sbjct: 244 YNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILK 303
Query: 262 EMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSG 321
M GC P ++ +I+ YCR++N + ELLDEM+ + P+ V+Y +++ L
Sbjct: 304 GMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCK 363
Query: 322 DFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTF 381
D A ++ EKM G KP+ ++ LI R++EA + M +GVAPD +
Sbjct: 364 DLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLD-GMSCSGVAPDIFCY 422
Query: 382 NTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDM 441
N +I+ S G E+A L E+ KP+ TF + KTGK E ++ D+M
Sbjct: 423 NAIISCLSKAGKMEEASTYLLEIQG-RGLKPDAVTFGAFILGYSKTGKMTEA-AKYFDEM 480
Query: 442 VNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHM 501
++ H L + YT++I+G +A A +F+ + + P QTC + + +
Sbjct: 481 LD-HGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGR 539
Query: 502 YDAAEKIEAVMKK 514
A K+ + +K+
Sbjct: 540 VQEALKVFSELKE 552
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 190/402 (47%), Gaps = 48/402 (11%)
Query: 133 SSEIYEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQWEDAV 188
S+ Y M++ L + + LLE+M+ K ++V +T+ + ++ G+ E+A
Sbjct: 348 SAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTL---IMGYASEGRIEEAR 404
Query: 189 RTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGW 247
R D + G+ + N ++ L K GK+E A + LE++ + P+A TF FI G+
Sbjct: 405 RLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGY 464
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF------------------- 288
K ++ EA EM HG P Y+ +I + + N
Sbjct: 465 SKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDV 524
Query: 289 -------------SKVYELL---DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEK 332
+V E L E++ +G P+V TY++++S K G+ E+A + ++
Sbjct: 525 QTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDE 584
Query: 333 MKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
M + G P+ +N L+ L ++ +Q A ++ MPE G+ PD+ T++TMI +
Sbjct: 585 MCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFD-GMPEKGLEPDSVTYSTMIDGYCKSE 643
Query: 393 HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
+ +AF + EM + +P+ ++ L+ C K G ++ ++ L +M+ K +
Sbjct: 644 NVAEAFSLFHEMPS-KGVQPHSFVYNALVHGCCKEGDMEKAMN-LFREMLQKGFAT--TL 699
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
++ +I G C++ K + A LF+EMI I P + T ++D
Sbjct: 700 SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVID 741
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 150/322 (46%), Gaps = 8/322 (2%)
Query: 164 HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELAR 223
+++T N + + +F G+ E A + T G + N+ T LL++ C+E + A
Sbjct: 278 NLITYNVLIHGLCKF---GKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRAL 334
Query: 224 SVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSY 282
+ E+ K + P+A ++ I+G C + A +++M G P V+ YST+I Y
Sbjct: 335 ELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGY 394
Query: 283 CRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDS 342
+ + LLD M G P++ Y ++S L+K+G EEA +++ G KPD+
Sbjct: 395 ASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDA 454
Query: 343 RFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLE 402
F I + ++ EA + EM ++G+ P+ + +I G+ +A +
Sbjct: 455 VTFGAFILGYSKTGKMTEAAKYFD-EMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFR 513
Query: 403 EMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC 462
++ L P+VQT + K G+ E L + + + L D+ TY+ +I G C
Sbjct: 514 HLHAL-GVLPDVQTCSAFIHGLLKNGRVQEALKVFSE--LKEKGLVPDVFTYSSLISGFC 570
Query: 463 RANKCEWAYLLFKEMIGHDITP 484
+ + E A+ L EM I P
Sbjct: 571 KQGEVEKAFELHDEMCLKGIAP 592
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 161/335 (48%), Gaps = 6/335 (1%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTF 240
G+ ++A++ F EL GL + T + L+ CK+G+VE A + E+ I PN +
Sbjct: 538 GRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIY 597
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
N + G CK + A+ M G P ++YST+I YC+ N ++ + L EM +
Sbjct: 598 NALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPS 657
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
+G P+ Y ++ K GD E+A+ + +M G + FN LI ++ ++QE
Sbjct: 658 KGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFAT-TLSFNTLIDGYCKSCKIQE 716
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
A ++Q EM + PD T+ T+I G E+A + +EM + V T+ L
Sbjct: 717 ASQLFQ-EMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTV-TYTSL 774
Query: 421 LKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH 480
+ K G++ E + L + MV K + D TY LVI+ C+ + A+ L E++G
Sbjct: 775 MYGYNKLGQSSEVFA-LFEKMVAKG-VKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGK 832
Query: 481 DITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
+ + L++ + ++ A K+ M +L
Sbjct: 833 GMLTKGTIHDLLITALCKREDLTEASKLLDEMGEL 867
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 156/344 (45%), Gaps = 5/344 (1%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
IY +VD L K + + R L + M KG T + ++ + + +A F E+
Sbjct: 596 IYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEM 655
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVD 254
+ G++ ++ N L+ CKEG +E A ++F E+ +FN I G+CK ++
Sbjct: 656 PSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQ 715
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA QEM P ++Y+T+I +C+ + L EMQ + + VTYT++M
Sbjct: 716 EASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLM 775
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
K G E + EKM G KPD + +IY + + EA + + E+ G+
Sbjct: 776 YGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEA-FKLRDEVVGKGM 834
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
+ + +IT +A +L+EM +L KP++ L++S + GK DE
Sbjct: 835 LTKGTIHDLLITALCKREDLTEASKLLDEMGEL-GLKPSLAACSTLVRSFHEAGKMDEAT 893
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
+ V L D TT +++G E A L K+++
Sbjct: 894 RVF--EGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 935
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 133/277 (48%), Gaps = 2/277 (0%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAV 188
G + S +Y +V K M++ L EM + T + ++ + + + ++A
Sbjct: 659 GVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEAS 718
Query: 189 RTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGW 247
+ F E+ + + T ++D CK GK+E A +F E++ + + T+ ++G+
Sbjct: 719 QLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGY 778
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
K+ + E ++M G P ++Y +I ++C++ N + ++L DE+ +G
Sbjct: 779 NKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKG 838
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
+ +++ L K D EA ++ ++M +G KP + L+ + A ++ EA V++
Sbjct: 839 TIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFE- 897
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
+ G+ PDT+T ++ + E A ++++++
Sbjct: 898 GVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQL 934
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 191/368 (51%), Gaps = 6/368 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++VD L KV + D+ + L EEM ++G I ++ + ++ F AG+WE++ R DE+
Sbjct: 218 YNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEML 277
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRVD 254
GL+ + T N+L+DTLCKEGKV A+ + + ++S I P+ T+N I G+C + ++
Sbjct: 278 DQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLN 337
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
A+ M GC P VISY+ +I Y + + +L +EM G PNV+TY +++
Sbjct: 338 SARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLL 397
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
+ +G ++A ++ MK G +S + + L + + EA+ ++ E+ +
Sbjct: 398 KGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLF-TELKSSNF 456
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
+ N +I G E A+ + E+++ H +PNV T+ ++ + G+ D+
Sbjct: 457 KLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGH-EPNVVTYTIMIHGFCREGQVDK-- 513
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
+ +L + + + DI TY ++ G +NK E L M D++P TC +++D
Sbjct: 514 ANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVD 573
Query: 495 EVKQKHMY 502
+ + Y
Sbjct: 574 MLSKDEKY 581
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 162/341 (47%), Gaps = 20/341 (5%)
Query: 164 HIVTLNTIAKVM---RRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVE 220
+IVT NT+ K + R S +A R F + G + T L+ LC G +
Sbjct: 138 NIVTYNTLIKGLCMEHRIS------EATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNIN 191
Query: 221 LARSVFLELKSCIP-------PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI 273
+A + E+ + I PN T+NI + G CK+ R DEA+ +EMK G P +I
Sbjct: 192 IALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSII 251
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
SY+++I +C + + LLDEM QG P++VT+ ++ L K G EA ++ M
Sbjct: 252 SYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVM 311
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
G PD +N LI + A ++ V MP G PD ++N +I +S
Sbjct: 312 IESGIVPDLVTYNSLIEGFCMVGDLNSARELF-VSMPSKGCEPDVISYNVLINGYSKTLK 370
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
E+A + EM L +PNV T+ LLK F GK D+ ++ L ++ H ++ + T
Sbjct: 371 VEEAMKLYNEM-LLVGKRPNVITYDSLLKGIFLAGKVDD--AKKLFSVMKAHGIAENSYT 427
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
Y + + GLC+ + A LF E+ + + ++D
Sbjct: 428 YGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLID 468
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 177/379 (46%), Gaps = 31/379 (8%)
Query: 144 LGKVRQMDQMRALLEEMSKGHI--------VTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
L K++ Q+ +L +M + + LN + V R G + +R
Sbjct: 79 LAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRR----- 133
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
G N T N L+ LC E ++ A +FL + K P+ T+ I G C ++
Sbjct: 134 --GYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNIN 191
Query: 255 EAQWTIQEMKGH------GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
A QEM C P VI+Y+ I+ C+ + +L +EM+ QG P+++
Sbjct: 192 IALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSII 251
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
+Y +++ +G +EE+ R+ ++M G +PD FN LI TL + +V EA + V
Sbjct: 252 SYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGV- 310
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M E+G+ PD T+N++I F G A + M + C+P+V +++ L+ KT
Sbjct: 311 MIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPS-KGCEPDVISYNVLINGYSKTL 369
Query: 429 KTDECLSQLLDDM--VNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
K +E + +L ++M V K ++ TY ++ G+ A K + A LF M H I
Sbjct: 370 KVEEAM-KLYNEMLLVGKRP---NVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENS 425
Query: 487 QTCRLILDEV-KQKHMYDA 504
T + LD + K +++A
Sbjct: 426 YTYGIFLDGLCKNDCLFEA 444
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 164/354 (46%), Gaps = 11/354 (3%)
Query: 167 TLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF 226
+L++ ++ + + ++++ GL + T+N+LL+ LC ++ + F
Sbjct: 68 SLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAF 127
Query: 227 LE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQ 285
L+ PN T+N I G C +R+ EA M+ GC P V++Y T+I+ C
Sbjct: 128 AGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGT 187
Query: 286 YNFSKVYELLDEMQAQ------GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
N + +L EM C PNV+TY ++ L K G +EA ++ E+MK G
Sbjct: 188 GNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMI 247
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
P +N LI+ A + +E+ + EM + G+ PD TFN +I G +A
Sbjct: 248 PSIISYNSLIHGFCCAGKWEESKRLLD-EMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKK 306
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIH 459
+L M + P++ T++ L++ G + +L M +K D+ +Y ++I+
Sbjct: 307 LLGVMIE-SGIVPDLVTYNSLIEGFCMVGDLNSA-RELFVSMPSKG-CEPDVISYNVLIN 363
Query: 460 GLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
G + K E A L+ EM+ P T +L + D A+K+ +VMK
Sbjct: 364 GYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMK 417
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 158/343 (46%), Gaps = 15/343 (4%)
Query: 33 SHIVSSSPIESYCSDGARLDHHQVL--CVDSPRLPDIDVIISKVHVGSSEDEVFQSLKQD 90
S I +S I +C G + ++L +D PD+ + E +V ++ K
Sbjct: 249 SIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLL 308
Query: 91 HVC--NAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGK 146
V + I P N LI F D SA +F S G E Y ++++ K
Sbjct: 309 GVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPS-KGCEPDVISYNVLINGYSK 367
Query: 147 VRQMDQMRALLEEM----SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKN 202
++++ L EM + +++T +++ K + AG+ +DA + F + G+ +N
Sbjct: 368 TLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFL---AGKVDDAKKLFSVMKAHGIAEN 424
Query: 203 TETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQ 261
+ T + LD LCK + A +F ELKS N I G CK +++ A +
Sbjct: 425 SYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFE 484
Query: 262 EMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSG 321
++ G P V++Y+ +I +CR+ K L+ +M+A GC P+++TY T+M +S
Sbjct: 485 KLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESN 544
Query: 322 DFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
EE +++ +M PD+ + ++ L + + QE +++
Sbjct: 545 KLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHL 587
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 149/317 (47%), Gaps = 18/317 (5%)
Query: 95 AIQPSHYLVNKLIHRFKDDWK-----SALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQ 149
+QP N LI + K LG+ +G P Y +++ V
Sbjct: 280 GLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLV----TYNSLIEGFCMVGD 335
Query: 150 MDQMRALLEEM-SKG---HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTET 205
++ R L M SKG +++ N + + +S + E+A++ ++E+ G N T
Sbjct: 336 LNSARELFVSMPSKGCEPDVISYNVL---INGYSKTLKVEEAMKLYNEMLLVGKRPNVIT 392
Query: 206 MNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
+ LL + GKV+ A+ +F +K+ I N++T+ IF+ G CK + + EA E+K
Sbjct: 393 YDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELK 452
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
+ + + +I C+ +EL +++ +G PNVVTYT ++ + G +
Sbjct: 453 SSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVD 512
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTM 384
+A + +KM+ G PD +N L+ +++++E V + M + V+PD T + +
Sbjct: 513 KANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLH-RMAQKDVSPDAITCSIV 571
Query: 385 ITMFSHHGHHEKAFHVL 401
+ M S +++ H+L
Sbjct: 572 VDMLSKDEKYQECLHLL 588
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 87/151 (57%), Gaps = 1/151 (0%)
Query: 186 DAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFI 244
+A++ F EL + + E +N L+D LCK GK+E A +F +L + PN T+ I I
Sbjct: 443 EAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMI 502
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
HG+C+ +VD+A IQ+M+ +GC P +I+Y+T+++ + +V +LL M +
Sbjct: 503 HGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVS 562
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKI 335
P+ +T + V+ L+K ++E + + + I
Sbjct: 563 PDAITCSIVVDMLSKDEKYQECLHLLPRFPI 593
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 124/283 (43%), Gaps = 11/283 (3%)
Query: 214 CKEGKVELARSVF---LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHP 270
CK G V ++ L ++S P+ +FN + G KI + +M+ G
Sbjct: 43 CKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSS 102
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRIT 330
+ + ++ C + + + +G PN+VTY T++ L EA R+
Sbjct: 103 DRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLF 162
Query: 331 EKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ-----VEMPENGVAPDTSTFNTMI 385
+M+ +G PD + LI L + A+ ++Q + E P+ T+N ++
Sbjct: 163 LRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIV 222
Query: 386 TMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKH 445
G ++A + EEM K + P++ +++ L+ GK +E +LLD+M+++
Sbjct: 223 DGLCKVGREDEAKQLFEEM-KTQGMIPSIISYNSLIHGFCCAGKWEES-KRLLDEMLDQ- 279
Query: 446 HLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
L D+ T+ ++I LC+ K A L MI I P T
Sbjct: 280 GLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVT 322
>gi|222630937|gb|EEE63069.1| hypothetical protein OsJ_17877 [Oryza sativa Japonica Group]
Length = 702
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/406 (28%), Positives = 203/406 (50%), Gaps = 12/406 (2%)
Query: 114 WKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS--KGHIVTLNTI 171
W+ AL + RWA S G ++ + EM+V LG+ Q D + LL+EM G + +
Sbjct: 35 WEWALALLRWA-SDEGAADAAAL-EMVVRALGREGQHDVVCDLLDEMPLPPGSRLDVRAY 92
Query: 172 AKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFL--EL 229
V+ S AG++E A++ F EL G+ T N++LD + G+ R V L E+
Sbjct: 93 TTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGR-SWPRIVALLEEM 151
Query: 230 KSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
++ + P+ T + I + +D+A +++K G PCV++Y+ ++Q + + N+
Sbjct: 152 RAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNY 211
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
++ +L EM+ GC P+ VTY + A++G FEEA + + M G P++ +N +
Sbjct: 212 TEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTV 271
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
+ RV EA+ ++ M +NG P+ +T+N + M +LEEM++
Sbjct: 272 MTAYANVGRVDEALALFD-RMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSR-S 329
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
C PN T++ +L C K G D ++++L+ M + L TY +I R
Sbjct: 330 GCTPNRVTWNTMLAVCGKRGMED-YVTRVLNGM-KSCGVELSRDTYNTLISAYGRCGSRT 387
Query: 469 WAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
+A+ ++ EMI TP T +L+ + ++ + A+ I + M K
Sbjct: 388 YAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLK 433
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/449 (22%), Positives = 187/449 (41%), Gaps = 86/449 (19%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++ + GK + +L+EM + VT N +A R AG +E+A + D
Sbjct: 198 YNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYAR---AGFFEEAAKCLD 254
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKIN 251
+ + GL NT T N ++ G+V+ A ++F +K + PN +T+N+ K +
Sbjct: 255 TMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKS 314
Query: 252 RVDEAQWTIQEMKGHGCHP------------------------------CVI-----SYS 276
R ++EM GC P C + +Y+
Sbjct: 315 RFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYN 374
Query: 277 TIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIV 336
T+I +Y R + + +++ DEM + G P + TY +++ L++ GD+ A I KM
Sbjct: 375 TLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKN 434
Query: 337 GSKPDSRFFNCLIYTLGRASR------VQEAVYVYQV----------------------- 367
G KP+ + ++ L+ + +++ VYV +
Sbjct: 435 GFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGV 494
Query: 368 -----EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLK 422
E+ G PD FN+M+ M++ +G + KA + + + K P++ T++ L+
Sbjct: 495 EKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSI-KQSGLSPDLITYNSLMD 553
Query: 423 SCFKTGKT---DECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
K+ ++ ++ L QL V D+ +Y VI+G C+ + A + EMI
Sbjct: 554 MYAKSNESWEAEKILKQLKSSQVKP-----DVVSYNTVINGFCKQGLIKEAQRILSEMIA 608
Query: 480 HDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+ P T ++ M++ A ++
Sbjct: 609 DGMAPCVVTYHTLVGGYASLEMFNEAREV 637
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 122/279 (43%), Gaps = 11/279 (3%)
Query: 90 DHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKV 147
+ + + P N L++ + DW +A I G++ + + Y +++ K
Sbjct: 395 EMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLK-NGFKPNDQSYSLLLQCYAKG 453
Query: 148 RQMDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNT 203
+ ++ +E+ G I V L T+ V+ F + E + F E+ G + +
Sbjct: 454 GNAAGIESIEKEVYVGTIFPSWVILRTL--VIANFK-CRRLEGVEKAFQEVKAQGYKPDL 510
Query: 204 ETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQE 262
N +L K G A +F +K S + P+ T+N + + K N EA+ +++
Sbjct: 511 VIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQ 570
Query: 263 MKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGD 322
+K P V+SY+T+I +C+Q + +L EM A G P VVTY T++ A
Sbjct: 571 LKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEM 630
Query: 323 FEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
F EA + M KP + ++ + +A R EA
Sbjct: 631 FNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRYDEA 669
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 120/450 (26%), Positives = 222/450 (49%), Gaps = 18/450 (4%)
Query: 70 IISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWA--- 124
++ ++ V + +V ++ D + I P+ + ++ F ++ SAL + R
Sbjct: 187 VVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKH 246
Query: 125 GSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQ 183
G P +S IY+ ++ L K ++++ LLEEM G + T V+ +
Sbjct: 247 GCVP----NSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDR 302
Query: 184 WEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIF 243
+A + + + G + T L++ LCK G+V+ A+ +F + P FN
Sbjct: 303 INEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK---PEIVIFNTL 359
Query: 244 IHGWCKINRVDEAQWTIQEM-KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
IHG+ R+D+A+ + +M +G P V +Y+++I Y ++ E+L +M+ +G
Sbjct: 360 IHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKG 419
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
C PNV +YT ++ K G +EA + +M G KP++ FNCLI + R+ EAV
Sbjct: 420 CKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAV 479
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLK 422
+++ EMP G PD TFN++I+ + A +L +M E N T++ L+
Sbjct: 480 EIFR-EMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMIS-EGVVANTVTYNTLIN 537
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
+ + G+ E +L+++MV + LD TY +I GLCRA + + A LF++M+
Sbjct: 538 AFLRRGEIKEA-RKLVNEMVFQGS-PLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGH 595
Query: 483 TPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
P +C ++++ + + M + A + + M
Sbjct: 596 APSNISCNILINGLCRSGMVEEAVEFQKEM 625
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 184/372 (49%), Gaps = 10/372 (2%)
Query: 116 SALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTI-AKV 174
+++ +F W GS GY HS ++Y++++ LG + + LL +M IV ++ +
Sbjct: 93 TSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISI 152
Query: 175 MRRFSGAGQWEDAVRTFDEL-GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-C 232
MR + AG R E+ + E ++ N++L+ L ++A +VF ++ S
Sbjct: 153 MRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRK 212
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
IPP TF + + +C +N +D A +++M HGC P + Y T+I S + ++
Sbjct: 213 IPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEAL 272
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
+LL+EM GC P+ T+ V+ L K EA ++ +M I G PD + L+ L
Sbjct: 273 QLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGL 332
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
+ RV A ++ +P+ P+ FNT+I F HG + A VL +M P
Sbjct: 333 CKIGRVDAAKDLFY-RIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVP 387
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
+V T++ L+ +K G L ++L DM NK ++ +YT+++ G C+ K + AY
Sbjct: 388 DVCTYNSLIYGYWKEGLVGLAL-EVLHDMRNK-GCKPNVYSYTILVDGFCKLGKIDEAYN 445
Query: 473 LFKEMIGHDITP 484
+ EM + P
Sbjct: 446 VLNEMSADGLKP 457
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 188/380 (49%), Gaps = 12/380 (3%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAV 188
G+ Y +++ L K+ ++D + L + K IV NT+ + F G+ +DA
Sbjct: 317 GFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTL---IHGFVTHGRLDDAK 373
Query: 189 RTFDELGT-FGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIH 245
++ T +G+ + T N L+ KEG V LA V ++ K C PN +++ I +
Sbjct: 374 AVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGC-KPNVYSYTILVD 432
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G+CK+ ++DEA + EM G P + ++ +I ++C+++ + E+ EM +GC P
Sbjct: 433 GFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKP 492
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
+V T+ +++S L + + + A+ + M G ++ +N LI R ++EA +
Sbjct: 493 DVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLV 552
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
EM G D T+N++I G +KA + E+M + H N+ + L+
Sbjct: 553 N-EMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISC-NILINGLC 610
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
++G +E + + +MV + + DI T+ +I+GLCRA + E +F+++ I P
Sbjct: 611 RSGMVEEAV-EFQKEMVLRGS-TPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPD 668
Query: 486 YQTCRLILDEV-KQKHMYDA 504
T ++ + K +YDA
Sbjct: 669 TVTFNTLMSWLCKGGFVYDA 688
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 168/371 (45%), Gaps = 51/371 (13%)
Query: 97 QPSHYLVNKLIHRFK-----DDWKSALG-IFRWAGSCPGY-EHSSEIYEMMVDILGKVRQ 149
+P + N LIH F DD K+ L + G P ++S IY + L +
Sbjct: 350 KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGL-- 407
Query: 150 MDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLL 209
+ L + +KG + + ++ F G+ ++A +E+ GL+ NT N L
Sbjct: 408 --ALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCL 465
Query: 210 LDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG 267
+ CKE ++ A +F E+ K C P+ +TFN I G C+++ + A W +++M G
Sbjct: 466 ISAFCKEHRIPEAVEIFREMPRKGC-KPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG 524
Query: 268 CHPCVISYSTII-----------------------------------QSYCRQYNFSKVY 292
++Y+T+I + CR K
Sbjct: 525 VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKAR 584
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
L ++M G P+ ++ +++ L +SG EEA+ ++M + GS PD FN LI L
Sbjct: 585 SLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGL 644
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
RA R+++ + +++ ++ G+ PDT TFNT+++ G A +L+E + + P
Sbjct: 645 CRAGRIEDGLTMFR-KLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIE-DGFVP 702
Query: 413 NVQTFHPLLKS 423
N +T+ LL+S
Sbjct: 703 NHRTWSILLQS 713
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 139/278 (50%), Gaps = 10/278 (3%)
Query: 81 DEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWK--SALGIFRWAGSCPGYEHSSEIYE 138
DE + L + + ++P+ N LI F + + A+ IFR P ++Y
Sbjct: 441 DEAYNVLNE-MSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFR---EMPRKGCKPDVYT 496
Query: 139 M--MVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
++ L +V ++ LL +M S+G + T ++ F G+ ++A + +E+
Sbjct: 497 FNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV 556
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVD 254
G + T N L+ LC+ G+V+ ARS+F + L+ P+ + NI I+G C+ V+
Sbjct: 557 FQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVE 616
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA +EM G P +++++++I CR + ++QA+G PP+ VT+ T+M
Sbjct: 617 EAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLM 676
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
S+L K G +A + ++ G P+ R ++ L+ ++
Sbjct: 677 SWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSI 714
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 76/151 (50%), Gaps = 2/151 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ L + ++D+ R+L E+M + GH + + ++ +G E+AV E+
Sbjct: 567 YNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMV 626
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVD 254
G + T N L++ LC+ G++E ++F +L++ IPP+ TFN + CK V
Sbjct: 627 LRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVY 686
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQ 285
+A + E G P ++S ++QS Q
Sbjct: 687 DACLLLDEGIEDGFVPNHRTWSILLQSIIPQ 717
>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
Length = 684
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 185/387 (47%), Gaps = 39/387 (10%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
+Y+ ++ L + + LL+EM G +NT V+ G G +A R D +
Sbjct: 217 LYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLGLCGLGHVREAARLVDRM 276
Query: 195 GTFGLEKNTETMNLLLDTLCK-------------------------------EGKVELAR 223
G + T LL LC+ EGK+ A
Sbjct: 277 MMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEVNVVMLNTVIRGCLAEGKLARAT 336
Query: 224 SVF--LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQS 281
++ + K C PP+ HT+NI +HG CK+ R A + EM+ GC P +++YST++ S
Sbjct: 337 ELYEMMGSKGC-PPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHS 395
Query: 282 YCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPD 341
+CR + +LD+M A+G N Y ++ L K G +EA+R+ ++MK G KPD
Sbjct: 396 FCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPD 455
Query: 342 SRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVL 401
+N +IY L ++ EA +++ + E GV + T+NT+I H G ++ +
Sbjct: 456 ICTYNTIIYHLCNNDQMDEAEHIFG-NLLEEGVVANGITYNTLIHALLHSGRWQEGLRLA 514
Query: 402 EEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGL 461
EM L C +V +++ L+K+ K G D + LL++M+ K + + +Y ++I+ L
Sbjct: 515 NEM-VLHGCPLDVVSYNGLIKALCKEGNVDRSM-MLLEEMMTK-GIKPNNFSYNMLINEL 571
Query: 462 CRANKCEWAYLLFKEMIGHDITPRYQT 488
C+A K A L KEM+ +TP T
Sbjct: 572 CKAGKVRDALELSKEMLNQGLTPDIVT 598
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 165/323 (51%), Gaps = 14/323 (4%)
Query: 126 SCPGYEHSSEIYEMMVDILGK----VRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGA 181
CP H+ I + LG+ VR +D+M E+ +IVT +T+ + F
Sbjct: 346 GCPPDVHTYNILMHGLCKLGRCGSAVRMLDEME---EKGCAPNIVTYSTL---LHSFCRN 399
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTF 240
G W+DA D++ G N++ N ++ L K+GK++ A + E+KS P+ T+
Sbjct: 400 GMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTY 459
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
N I+ C +++DEA+ + G I+Y+T+I + + + L +EM
Sbjct: 460 NTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVL 519
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
GCP +VV+Y ++ L K G+ + ++ + E+M G KP++ +N LI L +A +V++
Sbjct: 520 HGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRD 579
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
A+ + + EM G+ PD T+NT+I G A ++LE++ E+ P++ T++ L
Sbjct: 580 ALELSK-EMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPN-ENVHPDIVTYNIL 637
Query: 421 LKSCFKTGKTDECLSQLLDDMVN 443
+ K D+ S LLD V+
Sbjct: 638 ISWHCKVRLLDDA-SMLLDKAVS 659
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 141/347 (40%), Gaps = 42/347 (12%)
Query: 197 FGLEKNTETMNLLLDTL----CKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINR 252
F + + + N +L TL C + L R + L+ +PP TF + C++ R
Sbjct: 139 FAVTPSFRSYNAVLSTLARADCHADALLLYRRM---LRDRVPPTTFTFGVAARALCRLGR 195
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
+A ++ M HGC P + Y T+I + Q ++ LLDEM GC +V T+
Sbjct: 196 ARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFND 255
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE- 371
V+ L G EA R+ ++M + G P + L+ L R + EA Y +PE
Sbjct: 256 VVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEA-YAMLGRVPEV 314
Query: 372 ------------------------------NGVAPDTSTFNTMITMFSHHGHHEKAFHVL 401
G PD T+N ++ G A +L
Sbjct: 315 NVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRML 374
Query: 402 EEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGL 461
+EM + + C PN+ T+ LL S + G D+ + L D ++ S++ Y +I+ L
Sbjct: 375 DEMEE-KGCAPNIVTYSTLLHSFCRNGMWDDARAML--DQMSAKGFSMNSQGYNGIIYAL 431
Query: 462 CRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+ K + A L +EM P T I+ + D AE I
Sbjct: 432 GKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHI 478
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 130/296 (43%), Gaps = 40/296 (13%)
Query: 98 PSHYLVNKLIHRFKDD--WKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRA 155
P+ + L+H F + W A + S G+ +S+ Y ++ LGK ++D+
Sbjct: 384 PNIVTYSTLLHSFCRNGMWDDARAMLDQM-SAKGFSMNSQGYNGIIYALGKDGKLDEAMR 442
Query: 156 LLEEMS----KGHIVTLNTIA--------------------------------KVMRRFS 179
L++EM K I T NTI ++
Sbjct: 443 LVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALL 502
Query: 180 GAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAH 238
+G+W++ +R +E+ G + + N L+ LCKEG V+ + + E+ + I PN
Sbjct: 503 HSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNF 562
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
++N+ I+ CK +V +A +EM G P +++Y+T+I C+ LL+++
Sbjct: 563 SYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKL 622
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGR 354
+ P++VTY ++S+ K ++A + +K G P+ R + ++ R
Sbjct: 623 PNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNERTWGMMVQNFVR 678
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 72/151 (47%), Gaps = 2/151 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLN-TIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ L K +D+ LLEEM I N + ++ AG+ DA+ E+
Sbjct: 529 YNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEML 588
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVD 254
GL + T N L++ LCK G A ++ +L + + P+ T+NI I CK+ +D
Sbjct: 589 NQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLD 648
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQ 285
+A + + G P ++ ++Q++ RQ
Sbjct: 649 DASMLLDKAVSGGIVPNERTWGMMVQNFVRQ 679
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/401 (28%), Positives = 198/401 (49%), Gaps = 14/401 (3%)
Query: 115 KSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAK 173
+ LG + G P IY ++ K + Q L EM K H + T+ T
Sbjct: 30 RQLLGRMKEMGCVP----DDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTN 85
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SC 232
++ AG+ +DAV+ DE+ G N T N++++ LC+E K++ A+ + E+
Sbjct: 86 IVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRG 145
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
P+ T+N FI G CK +RVDEA+ + M P V+SY+T+I C+ +
Sbjct: 146 YFPDVVTYNSFIKGLCKCDRVDEARKFLARMP---VTPDVVSYTTVINGLCKSGDLDSAS 202
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
+LD+M +GC P+VVTY++++ K G+ E A+ + + M +G +P+ +N L+ L
Sbjct: 203 RMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGAL 262
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
R + +A + VEM G PD ++N I +KA V + M + C P
Sbjct: 263 HRLGHIGKAEDML-VEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVE-RGCTP 320
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
N ++ L++ K + D+ ++ L++ K+ + +DI YT+++ GLC+ + + A
Sbjct: 321 NASSYSMLVEELCKKKELDDAIT-LVEQAREKYQI-VDILLYTVLLDGLCKGGRFDEACA 378
Query: 473 LFKEMIGHDIT-PRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
LF +++ I P ++LD ++ D A +I M
Sbjct: 379 LFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQM 419
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 129/255 (50%), Gaps = 8/255 (3%)
Query: 230 KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFS 289
KSC P+A TF I + G C+ N++++A+ + MK GC P Y+ +I Y + +F
Sbjct: 4 KSC-QPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFG 62
Query: 290 KVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
+ ++ L EM C P VVTYT ++ L K+G ++A+++ ++M+ G P+ +N ++
Sbjct: 63 QAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIV 122
Query: 350 YTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH 409
L ++ EA + + EM G PD T+N+ I ++A L M
Sbjct: 123 EGLCEERKLDEAKKMLE-EMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM----P 177
Query: 410 CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEW 469
P+V ++ ++ K+G D S++LD M N+ + D+ TY+ +I G C+ + E
Sbjct: 178 VTPDVVSYTTVINGLCKSGDLDSA-SRMLDQMTNR-GCTPDVVTYSSLIDGFCKGGEVER 235
Query: 470 AYLLFKEMIGHDITP 484
A L M+ P
Sbjct: 236 AMGLLDSMLKLGCRP 250
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 94/403 (23%), Positives = 177/403 (43%), Gaps = 38/403 (9%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS-KGH---IVTLNTIAKVM---------RRFSG--- 180
Y ++V+ L + R++D+ + +LEEM+ +G+ +VT N+ K + R+F
Sbjct: 118 YNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP 177
Query: 181 -----------------AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELAR 223
+G + A R D++ G + T + L+D CK G+VE A
Sbjct: 178 VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAM 237
Query: 224 SVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSY 282
+ LK PN +N + ++ + +A+ + EM+ G P V+SY+ I
Sbjct: 238 GLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGL 297
Query: 283 CRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDS 342
C+ K + D M +GC PN +Y+ ++ L K + ++AI + E+ + D
Sbjct: 298 CKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDI 357
Query: 343 RFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLE 402
+ L+ L + R EA ++ + E PD +N M+ +KA + +
Sbjct: 358 LLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHK 417
Query: 403 EMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC 462
+M + C NV T++ L+ + + + LL MV++ + D TY ++ +C
Sbjct: 418 QMLERNCC--NVVTWNILVHGLCVDDRLSDAETMLL-TMVDEGFIP-DFVTYGTLVDAMC 473
Query: 463 RANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
+ K A LF+E + P T ++ + ++M + A
Sbjct: 474 KCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEA 516
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 123/263 (46%), Gaps = 16/263 (6%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G ++ Y M+V+ L K +++D L+E+ K IV + ++ G++++A
Sbjct: 317 GCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEA 376
Query: 188 VRTFDE-LGTFGLEKNTETMNLLLDTLCKEGKVELARSV---FLELKSCIPPNAHTFNIF 243
F + L E + N++LD+ CK +++ A + LE C N T+NI
Sbjct: 377 CALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCC---NVVTWNIL 433
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
+HG C +R+ +A+ + M G P ++Y T++ + C+ + EL +E GC
Sbjct: 434 VHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGC 493
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
P+VVTY+ +++ L EEA + K+ D +N +I +
Sbjct: 494 VPDVVTYSALITGLVHENMAEEAYLLFTKL-------DVALWNAMILGYAENGSGDLGLK 546
Query: 364 VYQVEMPENGVAPDTSTFNTMIT 386
++ VE+ E+ V P+ TF I+
Sbjct: 547 LF-VELIESDVEPNARTFGKEIS 568
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 133/311 (42%), Gaps = 48/311 (15%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK----GHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++D K ++++ LL+ M K ++V N++ + R G+ ED +
Sbjct: 220 YSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLV--- 276
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKI 250
E+ G + + N +D LCK +V+ A++VF + + C PNA ++++ + CK
Sbjct: 277 EMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGC-TPNASSYSMLVEELCKK 335
Query: 251 NRVDEAQWTIQEM--------------------KGHG----------------CHPCVIS 274
+D+A +++ KG C P V
Sbjct: 336 KELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFF 395
Query: 275 YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
Y+ ++ S+C++ K ++ +M + C NVVT+ ++ L +A + M
Sbjct: 396 YNVMLDSHCKRRQIDKALQIHKQMLERNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMV 454
Query: 335 IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHH 394
G PD + L+ + + + A+ +++ E + G PD T++ +IT H
Sbjct: 455 DEGFIPDFVTYGTLVDAMCKCGKSAAALELFE-EAVKGGCVPDVVTYSALITGLVHENMA 513
Query: 395 EKAFHVLEEMN 405
E+A+ + +++
Sbjct: 514 EEAYLLFTKLD 524
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 87/228 (38%), Gaps = 30/228 (13%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGT 196
Y +M+D K RQ+D+ + ++M + + + T ++ + DA +
Sbjct: 396 YNVMLDSHCKRRQIDKALQIHKQMLERNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVD 455
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDE 255
G + T L+D +CK GK A +F E +K P+ T++ I G N +E
Sbjct: 456 EGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEE 515
Query: 256 AQWTIQEMKGHGCHPCVISYST-------------IIQS----------------YCRQY 286
A ++ + ++ Y+ +I+S +
Sbjct: 516 AYLLFTKLDVALWNAMILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEISGKLVKAE 575
Query: 287 NFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
+ K L D G P++ T++ AK GD EEA RI MK
Sbjct: 576 SLGKARGLFDRAVKGGFFPDLFVANTLIDVFAKCGDLEEARRIFYSMK 623
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 115/354 (32%), Positives = 174/354 (49%), Gaps = 7/354 (1%)
Query: 126 SCPGYEHSSEIYEMMVDILGKVRQMDQMRA-LLEEMSKGHIVTLNTIAKVMRRFSGAGQW 184
SC G Y ++ L K +M++ LLE +G T + +S G+
Sbjct: 212 SCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKM 271
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIF 243
+A + FDE+ GL N +L++ K G + A S+F L + + P+ T + F
Sbjct: 272 TEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAF 331
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
IHG K RV EA E+K G P V +YS++I +C+Q K +EL DEM +G
Sbjct: 332 IHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGI 391
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
PN+ Y ++ L KSGD + A ++ + M G +PDS ++ +I ++ V EA
Sbjct: 392 APNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFS 451
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
++ EMP GV P + +N ++ G EKA ++ EM L+ +F+ L+
Sbjct: 452 LFH-EMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREM--LQKGFATTLSFNTLIDG 508
Query: 424 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
K+ K E SQL +M+ K + D TYT VI C+A K E A LLFKEM
Sbjct: 509 YCKSCKIQEA-SQLFQEMIAKQIMP-DHVTYTTVIDWHCKAGKMEEANLLFKEM 560
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 174/354 (49%), Gaps = 5/354 (1%)
Query: 162 KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVEL 221
KG + T + A + +A TF+E+ GL+ + + L+D +EG ++
Sbjct: 4 KGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDE 63
Query: 222 ARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQ 280
+ + SC IP N T+N+ IHG CK ++++A ++ M GC P ++ +I+
Sbjct: 64 VLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIE 123
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
YCR++N + ELLDEM+ + P+ V+Y +++ L D A ++ EKM G KP
Sbjct: 124 GYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKP 183
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
+ ++ LI R++EA + M +GVAPD +N +I+ S G E+A
Sbjct: 184 NVVVYSTLIMGYASEGRIEEARRLLD-GMSCSGVAPDIFCYNAIISCLSKAGKMEEASTY 242
Query: 401 LEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHG 460
L E+ KP+ TF + KTGK E ++ D+M++ H L + YT++I+G
Sbjct: 243 LLEIQG-RGLKPDAVTFGAFILGYSKTGKMTEA-AKYFDEMLD-HGLMPNNPLYTVLING 299
Query: 461 LCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
+A A +F+ + + P QTC + + + A K+ + +K+
Sbjct: 300 HFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKE 353
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 190/402 (47%), Gaps = 48/402 (11%)
Query: 133 SSEIYEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQWEDAV 188
S+ Y M++ L + + LLE+M+ K ++V +T+ + ++ G+ E+A
Sbjct: 149 SAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTL---IMGYASEGRIEEAR 205
Query: 189 RTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGW 247
R D + G+ + N ++ L K GK+E A + LE++ + P+A TF FI G+
Sbjct: 206 RLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGY 265
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF------------------- 288
K ++ EA EM HG P Y+ +I + + N
Sbjct: 266 SKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDV 325
Query: 289 -------------SKVYELL---DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEK 332
+V E L E++ +G P+V TY++++S K G+ E+A + ++
Sbjct: 326 QTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDE 385
Query: 333 MKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
M + G P+ +N L+ L ++ +Q A ++ MPE G+ PD+ T++TMI +
Sbjct: 386 MCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFD-GMPEKGLEPDSVTYSTMIDGYCKSE 444
Query: 393 HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
+ +AF + EM + +P+ ++ L+ C K G ++ ++ L +M+ K +
Sbjct: 445 NVAEAFSLFHEMPS-KGVQPHSFVYNALVHGCCKEGDMEKAMN-LFREMLQKGFAT--TL 500
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
++ +I G C++ K + A LF+EMI I P + T ++D
Sbjct: 501 SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVID 542
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 150/322 (46%), Gaps = 8/322 (2%)
Query: 164 HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELAR 223
+++T N + + +F G+ E A + T G + N+ T LL++ C+E + A
Sbjct: 79 NLITYNVLIHGLCKF---GKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRAL 135
Query: 224 SVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSY 282
+ E+ K + P+A ++ I+G C + A +++M G P V+ YST+I Y
Sbjct: 136 ELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGY 195
Query: 283 CRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDS 342
+ + LLD M G P++ Y ++S L+K+G EEA +++ G KPD+
Sbjct: 196 ASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDA 255
Query: 343 RFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLE 402
F I + ++ EA + EM ++G+ P+ + +I G+ +A +
Sbjct: 256 VTFGAFILGYSKTGKMTEAAKYFD-EMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFR 314
Query: 403 EMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC 462
++ L P+VQT + K G+ E L + + + L D+ TY+ +I G C
Sbjct: 315 HLHAL-GVLPDVQTCSAFIHGLLKNGRVQEALKVFSE--LKEKGLVPDVFTYSSLISGFC 371
Query: 463 RANKCEWAYLLFKEMIGHDITP 484
+ + E A+ L EM I P
Sbjct: 372 KQGEVEKAFELHDEMCLKGIAP 393
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 175/390 (44%), Gaps = 51/390 (13%)
Query: 143 ILGKVRQMDQMRAL--LEEMSKGHIVTLNTIAKVMRRFSGAGQWED---AVRTFDELGTF 197
I G R+ + RAL L+EM K ++V M +G +D A + +++
Sbjct: 122 IEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAM--INGLCHCKDLSLANKLLEKMTFS 179
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC--IPPNAHTFNIFIHGWCKINRVDE 255
GL+ N + L+ EG++E AR + L+ SC + P+ +N I K +++E
Sbjct: 180 GLKPNVVVYSTLIMGYASEGRIEEARRL-LDGMSCSGVAPDIFCYNAIISCLSKAGKMEE 238
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
A + E++G G P +++ I Y + ++ + DEM G PN YT +++
Sbjct: 239 ASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLIN 298
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
K+G+ EA+ I + +G PD + + I+ L + RVQEA+ V+ E+ E G+
Sbjct: 299 GHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFS-ELKEKGLV 357
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS 435
PD T++++I+ F G EKAF + +EM L+ PN+ ++ L+ K+G
Sbjct: 358 PDVFTYSSLISGFCKQGEVEKAFELHDEMC-LKGIAPNIFIYNALVDGLCKSGDIQRA-R 415
Query: 436 QLLDDMVNKHHLSLDITTYTLVI-----------------------------------HG 460
+L D M K L D TY+ +I HG
Sbjct: 416 KLFDGMPEKG-LEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHG 474
Query: 461 LCRANKCEWAYLLFKEMI--GHDITPRYQT 488
C+ E A LF+EM+ G T + T
Sbjct: 475 CCKEGDMEKAMNLFREMLQKGFATTLSFNT 504
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 161/367 (43%), Gaps = 32/367 (8%)
Query: 64 LPDIDVIISKVHVGSSEDEVFQSLK-QDHVC-NAIQPSHYLVNKLIHRF--KDDWKSALG 119
+PD+ S + + EV ++ + D +C I P+ ++ N L+ D + A
Sbjct: 357 VPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARK 416
Query: 120 IFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKG---HIVTLNTIAKVM 175
+F G E S Y M+D K + + +L EM SKG H N +
Sbjct: 417 LFDGMPE-KGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGC 475
Query: 176 RRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIP 234
+ G E A+ F E+ G T + N L+D CK K++ A +F E+ I
Sbjct: 476 CK---EGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIM 531
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMK-----------------GHGCHPCVISYST 277
P+ T+ I CK +++EA +EM+ G P ++Y
Sbjct: 532 PDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGL 591
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+I ++C++ N + ++L DE+ +G + +++ L K D EA ++ ++M +G
Sbjct: 592 VIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELG 651
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKA 397
KP + L+ + A ++ EA V++ + G+ PDT+T ++ + E A
Sbjct: 652 LKPSLAACSTLVRSFHEAGKMDEATRVFE-GVKSLGLVPDTTTLIDLVNGNLNDTDSEDA 710
Query: 398 FHVLEEM 404
++++++
Sbjct: 711 RNLIKQL 717
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 86/187 (45%), Gaps = 4/187 (2%)
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
M +G PN TYT + + L ++ EA E+M+ G KPD + LI R
Sbjct: 1 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60
Query: 358 VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTF 417
+ E + + V M G+ + T+N +I G EKA +L+ M L CKPN +TF
Sbjct: 61 IDEVLRIKDV-MVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITL-GCKPNSRTF 118
Query: 418 HPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
L++ + L +LLD+M K +L +Y +I+GLC A L ++M
Sbjct: 119 CLLIEGYCREHNMGRAL-ELLDEM-EKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKM 176
Query: 478 IGHDITP 484
+ P
Sbjct: 177 TFSGLKP 183
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 124/452 (27%), Positives = 216/452 (47%), Gaps = 47/452 (10%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWA-GSCPGYEHSSEIYEMMVDILGKVRQ----MDQMRA- 155
+V ++++ KD K AL FRWA S PG+ H++ + ++ +L + ++ D R+
Sbjct: 45 IVGRVVNSLKD-AKLALAFFRWAPASIPGFSHTAFSWNSLLQVLVRCKKHREAGDLFRSE 103
Query: 156 ------------------------------LLEEM-SKGHIVTLNTIAKVMRRFSGAGQW 184
LLEEM S G T ++ + AG
Sbjct: 104 LLASCEPDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDL 163
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK--SCIPPNAHTFNI 242
+ A+ D L + G + N T L+ + K+E A + E++ C PPN T+N+
Sbjct: 164 DGAM---DHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGC-PPNLVTYNV 219
Query: 243 FIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
+ CK++ V AQ +++M G P V+++++++ +C++ N +LL M A+G
Sbjct: 220 LVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKG 279
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
PNVVTY+ ++ L KS F EA + E+MK G PD+ ++ LI+ L +A +++EA
Sbjct: 280 MRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAE 339
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLK 422
+ + M +G PD ++++I F G +A L+EM K + P+V T++ ++
Sbjct: 340 QMLR-RMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRK-QRKSPDVVTYNTVID 397
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
K GK E +L+ M + D+ TY+ VI+GLC+++ A L M
Sbjct: 398 GLCKLGKIAEA-QVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGC 456
Query: 483 TPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
P T I+D + + + AE + MK+
Sbjct: 457 NPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKR 488
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 188/394 (47%), Gaps = 10/394 (2%)
Query: 121 FRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSG 180
+ AG P + I M + MD +R++ G + T ++ F+
Sbjct: 138 MKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM------GCDPNVVTYTALIAAFAR 191
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHT 239
A + E+A++ +E+ G N T N+L+D LCK V A+ V ++ + PN T
Sbjct: 192 AKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMT 251
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
FN + G+CK VD+A+ + M G P V++YS +I C+ F + E+L+EM+
Sbjct: 252 FNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMK 311
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
+G P+ TY+ ++ L K+ EEA ++ +M G PD ++ +I+ ++ ++
Sbjct: 312 TRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLL 371
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
EA Q EM + +PD T+NT+I G +A +LE+M + P+V T+
Sbjct: 372 EAQKTLQ-EMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYST 430
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
++ K+ E +Q L D + K + D+ TYT +I GLC+ + E A L + M
Sbjct: 431 VINGLCKSDMLVE--AQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKR 488
Query: 480 HDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
P T ++ + + D AE++ M+
Sbjct: 489 AGCAPNVVTYTTLISGLCKARKVDEAERVMEEMR 522
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 176/358 (49%), Gaps = 13/358 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK----GHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++ + +++++ LLEEM + ++VT N + + + S G +D V+
Sbjct: 182 YTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMI 241
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKIN 251
E G N T N L+D CK G V+ AR + + + + PN T++ I G CK
Sbjct: 242 E---GGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQ 298
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
+ EA+ ++EMK G P +YS +I C+ + ++L M GC P+VV Y+
Sbjct: 299 KFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYS 358
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
+++ KSG EA + ++M+ PD +N +I L + ++ EA + + +M E
Sbjct: 359 SIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILE-QMQE 417
Query: 372 NG-VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKT 430
+G V PD T++T+I +A +L+ M K C P+V T+ ++ K G+
Sbjct: 418 SGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCK-AGCNPDVVTYTTIIDGLCKCGRL 476
Query: 431 DECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+E ++ L + + + ++ TYT +I GLC+A K + A + +EM P T
Sbjct: 477 EE--AEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVT 532
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 176/384 (45%), Gaps = 57/384 (14%)
Query: 67 IDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRF-----KDDWKSALGIF 121
+D + VG+++D V + ++ P+ N L+ F DD + LGI
Sbjct: 221 VDALCKLSMVGAAQDVVKKMIE-----GGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIM 275
Query: 122 RWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIV--------------- 166
G P Y ++D L K ++ + + +LEEM +
Sbjct: 276 VAKGMRPNVV----TYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCK 331
Query: 167 --TLNTIAKVMRRFSGAGQWEDAV-------------------RTFDELGTFGLEKNTET 205
+ +++RR +G+G D V +T E+ + T
Sbjct: 332 ADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVT 391
Query: 206 MNLLLDTLCKEGKVELARSVFLELKSC--IPPNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
N ++D LCK GK+ A+ + +++ + P+ T++ I+G CK + + EAQ + M
Sbjct: 392 YNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRM 451
Query: 264 KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF 323
GC+P V++Y+TII C+ + LL M+ GC PNVVTYTT++S L K+
Sbjct: 452 CKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKV 511
Query: 324 EEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA---PDTST 380
+EA R+ E+M+ G P+ +N ++ L + R++EA + V+ ++G A PD +T
Sbjct: 512 DEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQL--VQRMKDGRAECSPDAAT 569
Query: 381 FNTMITMFSHHGHHEKAFHVLEEM 404
+ T++ ++A +LE+M
Sbjct: 570 YRTIVNALMSSDLVQEAEQLLEQM 593
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 104/203 (51%), Gaps = 5/203 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLN--TIAKVMRRFSGAGQWEDAVRTFDEL 194
Y ++D L K+ ++ + + +LE+M + V + T + V+ + +A + D +
Sbjct: 392 YNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRM 451
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRV 253
G + T ++D LCK G++E A + +K + PN T+ I G CK +V
Sbjct: 452 CKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKV 511
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ--AQGCPPNVVTYT 311
DEA+ ++EM+ GC P +++Y+T++ C + +L+ M+ C P+ TY
Sbjct: 512 DEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYR 571
Query: 312 TVMSYLAKSGDFEEAIRITEKMK 334
T+++ L S +EA ++ E+MK
Sbjct: 572 TIVNALMSSDLVQEAEQLLEQMK 594
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKG----HIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y +++ L K + + + LL+ M K +VT TI + G+ E+A
Sbjct: 428 YSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTI---IDGLCKCGRLEEAEYLLQ 484
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKIN 251
+ G N T L+ LCK KV+ A V E+++ PPN T+N ++G C
Sbjct: 485 GMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSG 544
Query: 252 RVDEAQWTIQEMK-GHG-CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
R+ EAQ +Q MK G C P +Y TI+ + + +LL++M++
Sbjct: 545 RIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQMKS 595
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 187/351 (53%), Gaps = 5/351 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDA 187
GY+ + Y +++ L K+ ++D+ +L EM +G ++ + ++R + A + + A
Sbjct: 75 GYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHA 134
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHG 246
FDE+ G + L+ LC+ GKV+ A F ++ K PN +N+ +HG
Sbjct: 135 SSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHG 194
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C ++++A EMK H C P V++Y+T++ + C+ + +L + M+A G PN
Sbjct: 195 LCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPN 254
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
V+T++T++ L ++G+ E+A+ + M G KP+ + LI L RA +V +A +++
Sbjct: 255 VITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFE 314
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
+M + + PD +N++I + G ++A + EM+ +P + TF+ L+ K
Sbjct: 315 -KMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCK 373
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
GK ++L+ +M K L+ D TY ++I GL RA K + A ++K+M
Sbjct: 374 LGKLGRA-NELVAEMGTK-GLAADSCTYRILIAGLSRATKLDEALEVYKQM 422
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 154/379 (40%), Gaps = 79/379 (20%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKG-HIVTLNTIAKVMRRFSGAGQWEDA 187
G S + Y +V L K R++D +L +EM +G H +++ AG+ +DA
Sbjct: 110 GQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDA 169
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS--CIP----------- 234
F ++ G + N N+LL LC G++E A ++F E+KS C P
Sbjct: 170 SERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDA 229
Query: 235 -----------------------PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPC 271
PN TF+ IHG C+ +++A M GC P
Sbjct: 230 VCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPN 289
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
+Y+T+I CR + EL ++M PP+ V Y ++++ K G +EA ++
Sbjct: 290 KYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYR 349
Query: 332 KMKI-VGSKPDSRFFNCLI---YTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITM 387
+M G +P FN LI LG+ R E V EM G+A D+ T+ +I
Sbjct: 350 EMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELV----AEMGTKGLAADSCTYRILIAG 405
Query: 388 FSHHGHHEKAFHVLEEMNKLEH--------------CK--------------------PN 413
S ++A V ++M + + CK PN
Sbjct: 406 LSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPN 465
Query: 414 VQTFHPLLKSCFKTGKTDE 432
+TF L +S K G+ ++
Sbjct: 466 PETFRILSESLIKLGRVED 484
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 164/340 (48%), Gaps = 5/340 (1%)
Query: 170 TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL 229
T + +++ + E++ + +E+ G + N ++ + +E AR V+ +
Sbjct: 12 TYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHM 71
Query: 230 -KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
+S P+ +++I IHG KI ++DE+ + EM G P + +YS+++++ +
Sbjct: 72 VESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRV 131
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
L DEM G P+ + + ++ L ++G ++A ++M G +P+ +N L
Sbjct: 132 DHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVL 191
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
++ L + ++++A ++ EM + +PD T+NT++ E+ + E M
Sbjct: 192 LHGLCSSGQLEQANTLF-AEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAG 250
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
+ PNV TF L+ +TG+ ++ L ++ M+ + + TYT +I GLCRA K
Sbjct: 251 YV-PNVITFSTLIHGLCRTGELEKAL-EVFGSML-EAGCKPNKYTYTTLISGLCRAEKVI 307
Query: 469 WAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
A LF++M I P ++ ++ D AEK+
Sbjct: 308 QARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKL 347
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 122/256 (47%), Gaps = 4/256 (1%)
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
I N T++ I K + +E+ ++EM GC+P V +++ ++Q + R N K
Sbjct: 6 IAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAR 65
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
E+ M G P+ V+Y ++ LAK G +E+++I +M + G P + ++ L+ L
Sbjct: 66 EVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRAL 125
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
+A RV A ++ EM G PD F +I G + A ++M K C+P
Sbjct: 126 AKARRVDHASSLFD-EMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPK-HGCQP 183
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
NV ++ LL +G+ ++ + L +M H S D+ TY ++ +C+A + E
Sbjct: 184 NVPVYNVLLHGLCSSGQLEQA-NTLFAEM-KSHSCSPDVVTYNTLLDAVCKARRVEEGCK 241
Query: 473 LFKEMIGHDITPRYQT 488
LF+ M P T
Sbjct: 242 LFEAMRAAGYVPNVIT 257
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 158/362 (43%), Gaps = 9/362 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ L K + ++ +LEEM + G + VM+ F+ + E A + +
Sbjct: 13 YSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMV 72
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
G + + + ++L+ L K GK++ + + E+ P+ ++ + K RVD
Sbjct: 73 ESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVD 132
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
A EM G HP + + +I C+ E +M GC PNV Y ++
Sbjct: 133 HASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLL 192
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
L SG E+A + +MK PD +N L+ + +A RV+E +++ M G
Sbjct: 193 HGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEA-MRAAGY 251
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH-CKPNVQTFHPLLKSCFKTGKTDEC 433
P+ TF+T+I G EKA V M LE CKPN T+ L+ + K +
Sbjct: 252 VPNVITFSTLIHGLCRTGELEKALEVFGSM--LEAGCKPNKYTYTTLISGLCRAEKVIQA 309
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI-GHDITPRYQTCRLI 492
+L + M + + D Y +I G C+ + A L++EM G + P T +
Sbjct: 310 -RELFEKM-TQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTL 367
Query: 493 LD 494
+D
Sbjct: 368 ID 369
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 123/241 (51%), Gaps = 5/241 (2%)
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
V +YS+II+S ++ + Y++L+EM A GC P+V + VM A+S + E+A + +
Sbjct: 10 VFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQ 69
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHH 391
M G KPD+ ++ LI+ L + ++ E++ + EM G P +++++ +
Sbjct: 70 HMVESGYKPDNVSYHILIHGLAKIGKLDESLKILS-EMVMRGQTPSMQAYSSLVRALAKA 128
Query: 392 GHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDI 451
+ A + +EM + H P+ F+ L+ + GK + S+ M KH ++
Sbjct: 129 RRVDHASSLFDEMIRGGH-HPDRLMFYELILGLCQAGKVKDA-SERFKQM-PKHGCQPNV 185
Query: 452 TTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEA 510
Y +++HGLC + + E A LF EM H +P T +LD V K + + + + EA
Sbjct: 186 PVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEA 245
Query: 511 V 511
+
Sbjct: 246 M 246
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 113/263 (42%), Gaps = 38/263 (14%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++D + K R++++ L E M + G++ + T + ++ G+ E A+ F +
Sbjct: 223 YNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSML 282
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAH---------------- 238
G + N T L+ LC+ KV AR +F ++ ++CIPP+A
Sbjct: 283 EAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMD 342
Query: 239 --------------------TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTI 278
TFN I G+CK+ ++ A + EM G +Y +
Sbjct: 343 EAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRIL 402
Query: 279 IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
I R + E+ +M+ + + V+ + + L K+G+ ++A + E + G+
Sbjct: 403 IAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGA 462
Query: 339 KPDSRFFNCLIYTLGRASRVQEA 361
P+ F L +L + RV++A
Sbjct: 463 VPNPETFRILSESLIKLGRVEDA 485
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 124/273 (45%), Gaps = 26/273 (9%)
Query: 81 DEVFQSLKQDHVCN---AIQPSHYLVN-----KLIHRF--KDDWKSALGIFRWAGSC--P 128
D V ++ + + C A++ + Y+ N LIH + + AL +F GS
Sbjct: 228 DAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVF---GSMLEA 284
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI----VTLNT-IAKVMRRFSGAGQ 183
G + + Y ++ L + ++ Q R L E+M++ I V N+ IA +R G
Sbjct: 285 GCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKR----GS 340
Query: 184 WEDAVRTFDEL-GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFN 241
++A + + E+ G GL+ T N L+D CK GK+ A + E+ + + ++ T+
Sbjct: 341 MDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYR 400
Query: 242 IFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ 301
I I G + ++DEA ++M+ +S + + C+ N + Y + + +
Sbjct: 401 ILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKS 460
Query: 302 GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
G PN T+ + L K G E+A ++ E K
Sbjct: 461 GAVPNPETFRILSESLIKLGRVEDAQKLMEPAK 493
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 75/179 (41%), Gaps = 25/179 (13%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGH-----IVTLNTIAKVMRRFSGAGQWEDAVRTF 191
Y ++ K MD+ L EMS G IVT NT+ + F G+ A
Sbjct: 328 YNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTL---IDGFCKLGKLGRANELV 384
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK---------SCIPPNAHTFNI 242
E+GT GL ++ T +L+ L + K++ A V+ +++ SC+
Sbjct: 385 AEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVS-------- 436
Query: 243 FIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ 301
F+ G CK +D+A + + G P ++ + +S + +L++ +A+
Sbjct: 437 FVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKAR 495
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 119/414 (28%), Positives = 208/414 (50%), Gaps = 17/414 (4%)
Query: 107 IHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS----K 162
+ RF D A+ + R + G + + +Y ++++L + +M + ++ EM+ +
Sbjct: 137 LRRFDD----AVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQ 192
Query: 163 GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELA 222
+VTLNT+ K + R A Q AV +E+ + + + T L+ +EG +E A
Sbjct: 193 PDVVTLNTLIKALCR---AHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAA 249
Query: 223 RSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQS 281
V ++ ++ P T N+ I+G+CK+ RV++A IQ+ G P ++Y+T +
Sbjct: 250 LRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHC 309
Query: 282 YCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPD 341
C+ + S +++D M +G P+V TY TV++ L+K+G+ +EA I +M G PD
Sbjct: 310 LCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPD 369
Query: 342 SRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVL 401
+ FN LI L +R++EA+ + + E+ G++PD TFN +I G +
Sbjct: 370 TTTFNTLIVALCSQNRLEEALDLAR-ELTVKGLSPDVYTFNILINALCKVGDPHLGIRLF 428
Query: 402 EEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGL 461
EEM K C P+ T++ L+ GK L LL +M + TY +I L
Sbjct: 429 EEM-KSSGCAPDEVTYNILIDHLCSMGKLVNALD-LLKEM-ESNGCPRSTVTYNTIIDAL 485
Query: 462 CRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEAVMKK 514
C+ + E A +F +M H I+ T ++D + K K + DA E IE ++K+
Sbjct: 486 CKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKE 539
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/461 (23%), Positives = 214/461 (46%), Gaps = 14/461 (3%)
Query: 61 SPRLPDIDVIISKV-HVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDW--KSA 117
SP ++V+I+ +G ED + Q + + +P N +H + A
Sbjct: 262 SPTRVTVNVLINGYCKMGRVEDAL--GYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHA 319
Query: 118 LGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMR 176
L + G++ Y +++ L K ++D+ + ++ +M +G + T ++
Sbjct: 320 LKVMDLMLQ-EGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIV 378
Query: 177 RFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPP 235
+ E+A+ EL GL + T N+L++ LCK G L +F E+KS P
Sbjct: 379 ALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAP 438
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
+ T+NI I C + ++ A ++EM+ +GC ++Y+TII + C+Q + E+
Sbjct: 439 DEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVF 498
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
D+M A G + VT+ T++ L K+ ++A + E+M G +P + +N ++ +
Sbjct: 499 DQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQ 558
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQ 415
+++A + + M NG D T+ T+I G + A +L M +++ +P +
Sbjct: 559 GDLKKAADILET-MTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGM-RIKGIRPTPK 616
Query: 416 TFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANK-CEWAYLLF 474
++P+++S F+ + LS L +M D TY +V GLCR + A+
Sbjct: 617 AYNPVIQSLFRRNNLRDALS-LFREMTEVGEPP-DALTYKIVFRGLCRGGGPIKEAFDFL 674
Query: 475 KEMIGHDITPRYQTCRLILDEVKQKHMYD-AAEKIEAVMKK 514
EM+ P + + R++ + + M D IE +++K
Sbjct: 675 VEMVNKGFMPEFSSFRMLAEGLLNLGMDDYLISAIELIIEK 715
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 190/403 (47%), Gaps = 9/403 (2%)
Query: 95 AIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMR 154
AI L+ L R + D ++AL + A + + S +YE ++ LG D M
Sbjct: 52 AISDQDRLLTAL--REQADPEAALQMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLME 109
Query: 155 ALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTF-DELGTFGLEKNTETMNLLLDT 212
L+ EM + GH + + ++ +++DAV ++L TFG++ +T N LL+
Sbjct: 110 GLVREMRREGHEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNV 169
Query: 213 LCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPC 271
L + +++L SV+ E+ I P+ T N I C+ ++V A ++EM H P
Sbjct: 170 LAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPD 229
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
+++T++Q + + + + +M GC P VT +++ K G E+A+ +
Sbjct: 230 ETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQ 289
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHH 391
K G +PD +N ++ L + V A+ V + M + G PD T+NT+I S +
Sbjct: 290 KEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDL-MLQEGHDPDVFTYNTVINCLSKN 348
Query: 392 GHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDI 451
G ++A ++ +M C P+ TF+ L+ + + +E L L + LS D+
Sbjct: 349 GELDEAKGIVNQMVD-RGCLPDTTTFNTLIVALCSQNRLEEALD--LARELTVKGLSPDV 405
Query: 452 TTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
T+ ++I+ LC+ LF+EM P T +++D
Sbjct: 406 YTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILID 448
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 110/370 (29%), Positives = 188/370 (50%), Gaps = 6/370 (1%)
Query: 146 KVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTET 205
KVR ++ E S + +T ++ FS AG + + +E+ + T
Sbjct: 2 KVRPLEGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVIT 61
Query: 206 MNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKG 265
N +L C+ G ++ A S F C P A T+ I IHG C+ R+DEA + EM
Sbjct: 62 HNTILKAYCQIGDLDRALSHFRGKMWC-SPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQ 120
Query: 266 HGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEE 325
CHP Y+ +I C+ +L M + C P+V+TYT+++ ++ +E
Sbjct: 121 KDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDE 180
Query: 326 AIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMI 385
A ++ EKMK G PD+ +N L+ L + ++++E + + EM E G PDT ++NT++
Sbjct: 181 ARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLE-EMVEAGREPDTFSYNTVV 239
Query: 386 TMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKH 445
G +E+A +LE+M + + C P+V T++ L+ K K DE +LL+DMV +
Sbjct: 240 ACLCESGKYEEAGKILEKMIE-KKCGPDVVTYNSLMDGFCKVSKMDE-AERLLEDMVGR- 296
Query: 446 HLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDA 504
+ + TYT +I G RA++ AY + ++M I+P T +LD + K + +A
Sbjct: 297 RCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEA 356
Query: 505 AEKIEAVMKK 514
E +E +++K
Sbjct: 357 HELLEVMVEK 366
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 186/345 (53%), Gaps = 16/345 (4%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++D KV +MD+ LLE+M T+ T ++ FS A + DA R +++
Sbjct: 270 YNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMF 329
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL---KSCIPPNAHTFNIFIHGWCKINR 252
G+ + T N LLD LCK GK+E A LE+ K C P+ T++I ++G CK+ +
Sbjct: 330 KAGISPDLVTYNCLLDGLCKAGKLEEAHE-LLEVMVEKDC-APDVVTYSILVNGLCKLGK 387
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
VD+A+ ++ M GC P +++++T+I +C+ + +++L+ M+ C P+VVTY+T
Sbjct: 388 VDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYST 447
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN 372
++ K A R+ + I+G PD ++ ++ L +V+EA V + M +
Sbjct: 448 LIDGYCK------ANRMQDAFAILGISPDKASYSSMLEGLCSTGKVEEAQEVMDL-MTKQ 500
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
G P +S + +I ++A +L+ M++ C+PN+ T+ L+ KT + ++
Sbjct: 501 GCPPTSSHYALIIGGLCDVERGDEALKMLQVMSE-RGCEPNLYTYSILINGLCKTKRVED 559
Query: 433 CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
++ +LD M+ K + D+ TYT +I G C+ NK + AY FK M
Sbjct: 560 AIN-VLDVMLEKGCVP-DVATYTSLIDGFCKINKMDAAYQCFKTM 602
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 102/335 (30%), Positives = 177/335 (52%), Gaps = 7/335 (2%)
Query: 183 QWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTF 240
+ ++A + DE+ + N L+ LCK GK++ AR+V + +SC+P + T+
Sbjct: 107 RIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVP-DVITY 165
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
I G C+ N +DEA+ +++MK G P ++Y+ ++ C+Q +V +LL+EM
Sbjct: 166 TSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVE 225
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
G P+ +Y TV++ L +SG +EEA +I EKM PD +N L+ + S++ E
Sbjct: 226 AGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDE 285
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
A + + +M AP T+ T+I FS A+ V+E+M K P++ T++ L
Sbjct: 286 AERLLE-DMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFK-AGISPDLVTYNCL 343
Query: 421 LKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH 480
L K GK +E +LL+ MV K + D+ TY+++++GLC+ K + A LL + M+
Sbjct: 344 LDGLCKAGKLEE-AHELLEVMVEKD-CAPDVVTYSILVNGLCKLGKVDDARLLLEMMLER 401
Query: 481 DITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
P T ++D + D K+ +MK++
Sbjct: 402 GCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEV 436
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 184/373 (49%), Gaps = 16/373 (4%)
Query: 146 KVRQMDQMRALLEEMSKGHIVTLNTIA--KVMRRFSGAGQWEDAVRTFDELGTFGLEKNT 203
+ +D+ R L+E+M + + T +T+A ++ Q E+ + +E+ G E +T
Sbjct: 174 QTNALDEARKLMEKMKESGL-TPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDT 232
Query: 204 ETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQ 261
+ N ++ LC+ GK E A + ++ K C P+ T+N + G+CK++++DEA+ ++
Sbjct: 233 FSYNTVVACLCESGKYEEAGKILEKMIEKKC-GPDVVTYNSLMDGFCKVSKMDEAERLLE 291
Query: 262 EMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSG 321
+M G C P VI+Y+T+I + R + Y ++++M G P++VTY ++ L K+G
Sbjct: 292 DMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAG 351
Query: 322 DFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTF 381
EEA + E M PD ++ L+ L + +V +A + ++ M E G P+ TF
Sbjct: 352 KLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEM-MLERGCQPNLVTF 410
Query: 382 NTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDM 441
NTMI F G ++ VLE M ++ C P+V T+ L+ K + + + L
Sbjct: 411 NTMIDGFCKAGKVDEGHKVLELMKEV-SCTPDVVTYSTLIDGYCKANRMQDAFAIL---- 465
Query: 442 VNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHM 501
+S D +Y+ ++ GLC K E A + M P LI+ +
Sbjct: 466 ----GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVER 521
Query: 502 YDAAEKIEAVMKK 514
D A K+ VM +
Sbjct: 522 GDEALKMLQVMSE 534
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 132/283 (46%), Gaps = 38/283 (13%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM----SKGHIVTLNTIAKVMRRFSGAGQWED------ 186
Y ++V+ L K+ ++D R LLE M + ++VT NT+ + F AG+ ++
Sbjct: 375 YSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTM---IDGFCKAGKVDEGHKVLE 431
Query: 187 -----------------------AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELAR 223
A R D G+ + + + +L+ LC GKVE A+
Sbjct: 432 LMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAILGISPDKASYSSMLEGLCSTGKVEEAQ 491
Query: 224 SVF-LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSY 282
V L K PP + + + I G C + R DEA +Q M GC P + +YS +I
Sbjct: 492 EVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGL 551
Query: 283 CRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDS 342
C+ +LD M +GC P+V TYT+++ K + A + + M+ G +PD
Sbjct: 552 CKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDK 611
Query: 343 RFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMI 385
+N LI ++ V++A+ V Q+ M E G PD +T+ +++
Sbjct: 612 LAYNILISGFCQSGNVEKAIEVMQL-MLEKGCNPDAATYFSLM 653
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 109/409 (26%), Positives = 200/409 (48%), Gaps = 24/409 (5%)
Query: 126 SCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAK------------ 173
+CP ++HS + + M+ IL + R++ +A++ M + V+ I +
Sbjct: 228 NCPNFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSN 287
Query: 174 ------VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFL 227
++R + A + + F L + GL + N LL L K G V+LA ++
Sbjct: 288 PLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQ 347
Query: 228 EL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQY 286
E+ +S + N +T NI I+ CK +++ + + +M+ G P V++Y+T+I +YCRQ
Sbjct: 348 EVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQG 407
Query: 287 NFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFN 346
+ +EL+D M +G P V TY +++ L K+G + A + ++M +G PD+ +N
Sbjct: 408 LLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYN 467
Query: 347 CLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNK 406
L+ R + +A ++ EMP GV PD +F+ +I + S +G ++A +M K
Sbjct: 468 ILLVECCRNDNMMDAERIFD-EMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDM-K 525
Query: 407 LEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANK 466
P+ + L+ + G E L ++ D+M+ + LD+ TY +++GLC+
Sbjct: 526 NAGLAPDNVIYTILIGGFCRNGVMSEAL-KVRDEML-EQGCXLDVVTYNTILNGLCKEKM 583
Query: 467 CEWAYLLFKEMIGHDITPRYQT-CRLILDEVKQKHMYDAAEKIEAVMKK 514
A LF EM + P + T LI K +M A E ++++
Sbjct: 584 LSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQR 632
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 133/270 (49%), Gaps = 3/270 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +++ L K + + + L EM+ +G T ++ + G AV F+ +
Sbjct: 571 YNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMI 630
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVD 254
L+ + T N L+D CK ++E ++ ++ S I PN ++ I I+G+C + V
Sbjct: 631 QRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVS 690
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA EM G +I+ +TI++ YCR N K E L M +G P+ +TY T++
Sbjct: 691 EAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLI 750
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
+ K + + A + KM+ G PD +N ++ R R+QEA + ++M E GV
Sbjct: 751 NGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELI-MLKMIERGV 809
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
PD ST+ ++I + ++AF V +EM
Sbjct: 810 NPDRSTYTSLINGHVTQNNLKEAFRVHDEM 839
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 158/327 (48%), Gaps = 11/327 (3%)
Query: 186 DAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFI 244
DA R FDE+ + G+ + + + L+ L K G ++ A F ++K+ + P+ + I I
Sbjct: 481 DAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILI 540
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
G+C+ + EA EM GC V++Y+TI+ C++ S+ EL EM +G
Sbjct: 541 GGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVF 600
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
P+ T+TT+++ K G+ +A+ + E M KPD +N LI + S +++ +
Sbjct: 601 PDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNEL 660
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
+ +M + P+ ++ +I + + G +AF + +EM + + + + T + ++K
Sbjct: 661 WN-DMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVE-KGFEATIITCNTIVKGY 718
Query: 425 FKTG---KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHD 481
+ G K DE LS +L + D TY +I+G + + A+ L +M
Sbjct: 719 CRAGNAVKADEFLSNML-----LKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSG 773
Query: 482 ITPRYQTCRLILDEVKQKHMYDAAEKI 508
+ P T +IL+ ++ AE I
Sbjct: 774 LLPDVITYNVILNGFSRQGRMQEAELI 800
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 169/352 (48%), Gaps = 10/352 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVM-RRFSGAGQWEDAVRTFDELG 195
+ ++ +L K +DQ +M + N I ++ F G +A++ DE+
Sbjct: 501 FSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEML 560
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
G + T N +L+ LCKE + A +F E+ + + P+ +TF I+G+ K ++
Sbjct: 561 EQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMN 620
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
+A + M P V++Y+T+I +C+ KV EL ++M ++ PN ++Y ++
Sbjct: 621 KAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILI 680
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
+ G EA R+ ++M G + N ++ RA +A + M G+
Sbjct: 681 NGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADE-FLSNMLLKGI 739
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCK--PNVQTFHPLLKSCFKTGKTDE 432
PD T+NT+I F + ++AF ++ NK+E+ P+V T++ +L + G+ E
Sbjct: 740 VPDGITYNTLINGFIKEENMDRAFALV---NKMENSGLLPDVITYNVILNGFSRQGRMQE 796
Query: 433 CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
++L+ + + ++ D +TYT +I+G N + A+ + EM+ P
Sbjct: 797 --AELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVP 846
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 120/272 (44%), Gaps = 11/272 (4%)
Query: 78 SSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDD--WKSALGIFRWAGSCPGYEHSSE 135
S DE+F + + + P Y LI+ + D A+ +F +
Sbjct: 585 SEADELFTEMTE----RGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQ-RNLKPDVV 639
Query: 136 IYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLN-TIAKVMRRFSGAGQWEDAVRTFDEL 194
Y ++D K +M+++ L +M I + + ++ + G +A R +DE+
Sbjct: 640 TYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEM 699
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE--LKSCIPPNAHTFNIFIHGWCKINR 252
G E T N ++ C+ G A FL L I P+ T+N I+G+ K
Sbjct: 700 VEKGFEATIITCNTIVKGYCRAGNAVKADE-FLSNMLLKGIVPDGITYNTLINGFIKEEN 758
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
+D A + +M+ G P VI+Y+ I+ + RQ + ++ +M +G P+ TYT+
Sbjct: 759 MDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTS 818
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRF 344
+++ + +EA R+ ++M G PD +F
Sbjct: 819 LINGHVTQNNLKEAFRVHDEMLQRGFVPDDKF 850
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 80/179 (44%), Gaps = 6/179 (3%)
Query: 337 GSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEK 396
GS P F+ L+ T +A +++E ++V + G+ + N+++ G +
Sbjct: 285 GSNP--LVFDLLVRTYVQARKLREGCEAFRV-LKSKGLCVSINACNSLLGGLVKVGWVDL 341
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTL 456
A+ + +E+ + + NV T + ++ + K K + S L DM K D+ TY
Sbjct: 342 AWEIYQEVVR-SGVQVNVYTLNIMINALCKNQKIENTKS-FLSDMEEKGVFP-DVVTYNT 398
Query: 457 VIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
+I+ CR E A+ L M G + P T I++ + + Y A+ + M K+
Sbjct: 399 LINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKI 457
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 191/360 (53%), Gaps = 17/360 (4%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKG------HIVTLNTIAKVMRRFSGAGQWEDAVRT 190
Y ++++ L KV ++D+ R L++EM++ +I+T N+ + + S + + +R+
Sbjct: 110 YSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRS 169
Query: 191 FDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCK 249
+ G+ + +T T + L+D LCK G+++ A SVF ++ PN T+N ++G CK
Sbjct: 170 LRD-GSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCK 228
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV-- 307
++++ A I+ M G P VI+YS ++ ++C+ + ELL M ++GC PNV
Sbjct: 229 ADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLV 288
Query: 308 ---VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
VT+ +++ K+G+FE+A + E+M +PD F LI L +A +V+ A +
Sbjct: 289 PDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDI 348
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
+ M GV P+ T+N ++ G E+A LEEM C P+ T+ L+ +
Sbjct: 349 LDL-MGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVS-SGCVPDSITYGSLVYAL 406
Query: 425 FKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
+ +TD+ L QL+ ++ D TY +++ GL ++ K E A + +EM+G P
Sbjct: 407 CRASRTDDAL-QLVSEL-KSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQP 464
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 115/386 (29%), Positives = 190/386 (49%), Gaps = 21/386 (5%)
Query: 113 DWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGH---IVTL 168
D AL IFR + G + Y +++ L K + L EE+ +GH +VT
Sbjct: 16 DTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTY 75
Query: 169 NTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE 228
NT+ + + AG E+A R ++ + G N T ++L++ LCK G+++ AR + E
Sbjct: 76 NTLIDSLCK---AGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQE 132
Query: 229 L--KSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCH--PCVISYSTIIQSYC 283
+ KSC + PN T+N F+ G CK + EA ++ ++ P +++ST+I C
Sbjct: 133 MTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLC 192
Query: 284 RQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSR 343
+ + + D+M A G PNV+TY +++ L K+ E A + E M G PD
Sbjct: 193 KCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVI 252
Query: 344 FFNCLIYTLGRASRVQEAVYVYQVEMPENG-----VAPDTSTFNTMITMFSHHGHHEKAF 398
++ L+ +ASRV EA+ + M G + PD TFN +I G+ E+A
Sbjct: 253 TYSVLVDAFCKASRVDEALELLH-GMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQAS 311
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
+ EEM ++ +P+V TF L+ K G+ E +LD M N + ++ TY ++
Sbjct: 312 ALFEEMVA-KNLQPDVMTFGALIDGLCKAGQV-EAARDILDLMGN-LGVPPNVVTYNALV 368
Query: 459 HGLCRANKCEWAYLLFKEMIGHDITP 484
HGLC++ + E A +EM+ P
Sbjct: 369 HGLCKSGRIEEACQFLEEMVSSGCVP 394
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 169/347 (48%), Gaps = 11/347 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
+ ++D L K Q+D+ ++ ++M + G++ + T ++ A + E A + +
Sbjct: 184 FSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMV 243
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIP----PNAHTFNIFIHGWCK 249
G+ + T ++L+D CK +V+ A + + + C P P+ TFNI I G CK
Sbjct: 244 DKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACK 303
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
++A +EM P V+++ +I C+ ++LD M G PPNVVT
Sbjct: 304 AGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVT 363
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM 369
Y ++ L KSG EEA + E+M G PDS + L+Y L RASR +A+ + E+
Sbjct: 364 YNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVS-EL 422
Query: 370 PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
G PDT T+N ++ G E+A VLEEM H +P+ TF ++G
Sbjct: 423 KSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGH-QPDSFTFAACFSGLHRSGN 481
Query: 430 TDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKE 476
+ +LL ++ K L D TT + ++ +CR+ K + + KE
Sbjct: 482 LAGTM-ELLRVVLAKGMLP-DATTCSSILDWVCRSGKLDDVKAMIKE 526
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 166/353 (47%), Gaps = 15/353 (4%)
Query: 174 VMRRFSGAGQWEDAVRTF-DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KS 231
V++ AG A+ F E+ G+ T N +++ LCK + +F EL +
Sbjct: 7 VLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVER 66
Query: 232 CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKV 291
P+ T+N I CK ++EA+ +M GC P V++YS +I C+ +
Sbjct: 67 GHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEA 126
Query: 292 YELLDEMQAQGCP--PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS---KPDSRFFN 346
EL+ EM + C PN++TY + + L K EA + ++ GS PD+ F+
Sbjct: 127 RELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRD-GSLRVSPDTVTFS 185
Query: 347 CLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNK 406
LI L + ++ EA V+ +M G P+ T+N ++ E+A ++E M
Sbjct: 186 TLIDGLCKCGQIDEACSVFD-DMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVD 244
Query: 407 LEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK----HHLSLDITTYTLVIHGLC 462
+ P+V T+ L+ + K + DE L +LL M ++ + L D T+ ++I G C
Sbjct: 245 -KGVTPDVITYSVLVDAFCKASRVDEAL-ELLHGMASRGCTPNVLVPDKVTFNILIAGAC 302
Query: 463 RANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
+A E A LF+EM+ ++ P T ++D + + +AA I +M L
Sbjct: 303 KAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNL 355
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 131/270 (48%), Gaps = 7/270 (2%)
Query: 240 FNIFIHGWCKINRVDEAQWTIQ-EMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
+NI + C+ A + EM G P +++Y+TII C+ + EL +E+
Sbjct: 4 YNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEEL 63
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRV 358
+G P+VVTY T++ L K+GD EEA R+ M G P+ ++ LI L + R+
Sbjct: 64 VERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRI 123
Query: 359 QEAVYVYQVEMPENG--VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE-HCKPNVQ 415
EA + Q EM V P+ T+N+ + +A ++ + P+
Sbjct: 124 DEARELIQ-EMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTV 182
Query: 416 TFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFK 475
TF L+ K G+ DE S + DDM+ ++ ++ TY +++GLC+A+K E A+ + +
Sbjct: 183 TFSTLIDGLCKCGQIDEACS-VFDDMIAGGYVP-NVITYNALVNGLCKADKMERAHAMIE 240
Query: 476 EMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
M+ +TP T +++D + D A
Sbjct: 241 SMVDKGVTPDVITYSVLVDAFCKASRVDEA 270
>gi|356499253|ref|XP_003518456.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Glycine max]
Length = 510
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 109/389 (28%), Positives = 183/389 (47%), Gaps = 16/389 (4%)
Query: 109 RFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGH--IV 166
R K+ K AL +F +A + P S + +++D + KVRQ D L+ EM + H
Sbjct: 76 RLKNHSKIALSLFHYAKTLPNPPLSHSSFTLLIDTMAKVRQFDVAWQLIVEMDQRHHLTP 135
Query: 167 TLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNT-ETMNLLLDTLCKEGKVELARSV 225
T +T ++RR AG AVR F ++ F K T + +LLDTLCK G V LA V
Sbjct: 136 TPSTFLTLIRRLICAGLTRQAVRAFHDIDAFSETKTTPQDFCVLLDTLCKYGHVRLAVEV 195
Query: 226 FLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQ 285
F + K PP + + I+GWCKI R+ AQ + EM G P V++Y+ ++ CR+
Sbjct: 196 FNKNKHTFPPTVKMYTVLIYGWCKIGRIKTAQSFLNEMIDKGIEPNVVTYNVLLNGVCRK 255
Query: 286 YNF----------SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKI 335
+ E+ D+M+ G P+V +++ ++ +++ + + MK
Sbjct: 256 VSLHPEERFERTIRNAEEVFDQMRESGIEPDVTSFSILLHVYSRAHKPQLVLDKLSLMKE 315
Query: 336 VGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHE 395
G P+ + +I L +++A + EM +GV+P +T+N F E
Sbjct: 316 KGICPNVVMYTSVIKCLASCGWLEDAERLLG-EMVRDGVSPCAATYNCFFKEFRGRKDGE 374
Query: 396 KAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYT 455
A + + M + C P+ T+ L++ + + + ++ DM + D+ YT
Sbjct: 375 SALRMFKRMKEDGLCMPSSHTYVILIRMFLRLDMI-KVVKEIWQDM-KETGAGPDLDLYT 432
Query: 456 LVIHGLCRANKCEWAYLLFKEMIGHDITP 484
++IHGLC + A F EMI + P
Sbjct: 433 VLIHGLCERQRWREACHYFVEMIENGFLP 461
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 119/268 (44%), Gaps = 14/268 (5%)
Query: 130 YEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKG---HIVTLNTIAK-VMRRFS--GAG 182
+ + ++Y +++ K+ ++ ++ L EM KG ++VT N + V R+ S
Sbjct: 203 FPPTVKMYTVLIYGWCKIGRIKTAQSFLNEMIDKGIEPNVVTYNVLLNGVCRKVSLHPEE 262
Query: 183 QWEDAVR----TFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNA 237
++E +R FD++ G+E + + ++LL + K +L +K I PN
Sbjct: 263 RFERTIRNAEEVFDQMRESGIEPDVTSFSILLHVYSRAHKPQLVLDKLSLMKEKGICPNV 322
Query: 238 HTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDE 297
+ I +++A+ + EM G PC +Y+ + + + + +
Sbjct: 323 VMYTSVIKCLASCGWLEDAERLLGEMVRDGVSPCAATYNCFFKEFRGRKDGESALRMFKR 382
Query: 298 MQAQG-CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRAS 356
M+ G C P+ TY ++ + + I + MK G+ PD + LI+ L
Sbjct: 383 MKEDGLCMPSSHTYVILIRMFLRLDMIKVVKEIWQDMKETGAGPDLDLYTVLIHGLCERQ 442
Query: 357 RVQEAVYVYQVEMPENGVAPDTSTFNTM 384
R +EA + Y VEM ENG P TF ++
Sbjct: 443 RWREACH-YFVEMIENGFLPLKGTFESL 469
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 137/331 (41%), Gaps = 28/331 (8%)
Query: 203 TETMNLLLDTLCK-EGKVELARSVFLELKSCI-PPNAHT-FNIFIHGWCKINRVDEAQWT 259
T T LL TL + + ++A S+F K+ PP +H+ F + I K+ + D A
Sbjct: 64 TLTPTLLFHTLLRLKNHSKIALSLFHYAKTLPNPPLSHSSFTLLIDTMAKVRQFDVAWQL 123
Query: 260 IQEM-KGHGCHPCVISYSTIIQ-----SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
I EM + H P ++ T+I+ RQ + + +D P + +
Sbjct: 124 IVEMDQRHHLTPTPSTFLTLIRRLICAGLTRQA--VRAFHDIDAFSETKTTPQ--DFCVL 179
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
+ L K G A+ + K K P + + LIY + R++ A + EM + G
Sbjct: 180 LDTLCKYGHVRLAVEVFNKNKHTFP-PTVKMYTVLIYGWCKIGRIKTA-QSFLNEMIDKG 237
Query: 374 VAPDTSTFNTMITMFSHHG--HHEKAFH--------VLEEMNKLEHCKPNVQTFHPLLKS 423
+ P+ T+N ++ H E+ F V ++M + +P+V +F LL
Sbjct: 238 IEPNVVTYNVLLNGVCRKVSLHPEERFERTIRNAEEVFDQMRE-SGIEPDVTSFSILLHV 296
Query: 424 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
+ K L +L ++ + + ++ YT VI L E A L EM+ ++
Sbjct: 297 YSRAHKPQLVLDKL--SLMKEKGICPNVVMYTSVIKCLASCGWLEDAERLLGEMVRDGVS 354
Query: 484 PRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
P T E + + ++A ++ MK+
Sbjct: 355 PCAATYNCFFKEFRGRKDGESALRMFKRMKE 385
Score = 45.4 bits (106), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 51/268 (19%), Positives = 108/268 (40%), Gaps = 24/268 (8%)
Query: 85 QSLKQDHVCNAIQPSHYLVNKLIH------------RFKDDWKSALGIFRWAGSCPGYEH 132
QS + + I+P+ N L++ RF+ ++A +F G E
Sbjct: 227 QSFLNEMIDKGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRNAEEVFDQMRES-GIEP 285
Query: 133 SSEIYEMMVDILGKVRQ----MDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAV 188
+ +++ + + + +D++ + E+ ++V ++ K + + G EDA
Sbjct: 286 DVTSFSILLHVYSRAHKPQLVLDKLSLMKEKGICPNVVMYTSVIKCL---ASCGWLEDAE 342
Query: 189 RTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS---CIPPNAHTFNIFIH 245
R E+ G+ T N E A +F +K C+P ++HT+ I I
Sbjct: 343 RLLGEMVRDGVSPCAATYNCFFKEFRGRKDGESALRMFKRMKEDGLCMP-SSHTYVILIR 401
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
+ +++ + + Q+MK G P + Y+ +I C + + + EM G P
Sbjct: 402 MFLRLDMIKVVKEIWQDMKETGAGPDLDLYTVLIHGLCERQRWREACHYFVEMIENGFLP 461
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKM 333
T+ ++ L ++ R+ +K+
Sbjct: 462 LKGTFESLYRGLIQADMLRTWRRLKKKL 489
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 122/429 (28%), Positives = 209/429 (48%), Gaps = 24/429 (5%)
Query: 81 DEVFQSLKQDHVCNAIQPSHYLVNKLIH---RFKDDWKS--ALGIFRWAGSCPGYEHSSE 135
+E F+ L +D VC P LI + WK+ + I +G+ P
Sbjct: 127 EEGFKFL-EDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVP----DVI 181
Query: 136 IYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
Y +++ K ++ LL+ MS +VT NTI +R +G+ ++A+ D
Sbjct: 182 TYNVLISGYCKTGEIGSALQLLDRMSVSPDVVTYNTI---LRTLCDSGKLKEAMEVLDRQ 238
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINR 252
+ T +L++ CKE V A + E+ K C P+ T+N+ I+G CK R
Sbjct: 239 MQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGC-KPDVVTYNVLINGICKEGR 297
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
+DEA + M +GC P VI+++ I++S C + + L EM +GC P+VVT+
Sbjct: 298 LDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNI 357
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN 372
++++L + G AI + EKM G P+S +N L++ L + +++ A+ + M
Sbjct: 358 LINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDI-MVSR 416
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
G PD T+NT++T G + A +L ++ + C P + T++ ++ K GKTD+
Sbjct: 417 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGS-KGCSPVLITYNTVIDGLSKVGKTDD 475
Query: 433 CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR---YQTC 489
+ +LLD+M K L DI TY+ ++ GL R K + A F ++ + P Y +
Sbjct: 476 AI-KLLDEMKGK-GLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSI 533
Query: 490 RLILDEVKQ 498
L L + +Q
Sbjct: 534 MLGLCKARQ 542
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 176/366 (48%), Gaps = 7/366 (1%)
Query: 149 QMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN 207
++++ LE+M +G I + ++R G+ A R + L G + T N
Sbjct: 125 ELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYN 184
Query: 208 LLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG 267
+L+ CK G E+ ++ L + + P+ T+N + C ++ EA +
Sbjct: 185 VLISGYCKTG--EIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRE 242
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
C+P VI+Y+ +I++ C++ + +LLDEM+ +GC P+VVTY +++ + K G +EAI
Sbjct: 243 CYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAI 302
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITM 387
R M G +P+ N ++ ++ R +A + EM G +P TFN +I
Sbjct: 303 RFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEK-FLAEMIRKGCSPSVVTFNILINF 361
Query: 388 FSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHL 447
G +A VLE+M + C PN +++PLL + K K + + + LD MV++
Sbjct: 362 LCRKGLIGRAIDVLEKMPQ-HGCTPNSLSYNPLLHALCKDKKMERAI-EYLDIMVSRGCY 419
Query: 448 SLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEK 507
DI TY ++ LC+ K + A + ++ +P T ++D + + D A K
Sbjct: 420 P-DIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIK 478
Query: 508 IEAVMK 513
+ MK
Sbjct: 479 LLDEMK 484
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 164/313 (52%), Gaps = 11/313 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++++ + K ++D+ L M + +++T N I +R G+W DA +
Sbjct: 285 YNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNII---LRSMCSTGRWMDAEKFLA 341
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKIN 251
E+ G + T N+L++ LC++G + A V ++ + PN+ ++N +H CK
Sbjct: 342 EMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDK 401
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
+++ A + M GC+P +++Y+T++ + C+ E+L+++ ++GC P ++TY
Sbjct: 402 KMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYN 461
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
TV+ L+K G ++AI++ ++MK G KPD ++ L+ L R +V EA+ + ++ E
Sbjct: 462 TVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFH-DLEE 520
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
GV P+ T+N+++ +A L M CKP ++ L++ G
Sbjct: 521 MGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVA-RGCKPTETSYMILIEGLAYEGLAK 579
Query: 432 ECLSQLLDDMVNK 444
E L +LL+++ ++
Sbjct: 580 EAL-ELLNELCSR 591
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 135/306 (44%), Gaps = 33/306 (10%)
Query: 19 LTSRIRF--HSSSENCSHIVSSSPI--ESYCSDGARLDHHQVL-------CVDSPRLPDI 67
L IRF H S C V + I S CS G +D + L C SP +
Sbjct: 298 LDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGC--SPSVVTF 355
Query: 68 DVIIS----KVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWK-----SAL 118
+++I+ K +G + D V + + Q H C P+ N L+H D K L
Sbjct: 356 NILINFLCRKGLIGRAID-VLEKMPQ-HGCT---PNSLSYNPLLHALCKDKKMERAIEYL 410
Query: 119 GIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRR 177
I G P Y ++ L K ++D +L ++ SKG L T V+
Sbjct: 411 DIMVSRGCYP----DIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDG 466
Query: 178 FSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPN 236
S G+ +DA++ DE+ GL+ + T + L+ L +EGKV+ A + F +L+ + PN
Sbjct: 467 LSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPN 526
Query: 237 AHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLD 296
A T+N + G CK + A + M GC P SY +I+ + + ELL+
Sbjct: 527 AITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLN 586
Query: 297 EMQAQG 302
E+ ++G
Sbjct: 587 ELCSRG 592
>gi|449511130|ref|XP_004163870.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 847
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 126/449 (28%), Positives = 213/449 (47%), Gaps = 36/449 (8%)
Query: 61 SPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPS-----------HYLVNKL--- 106
S R P KV +G ED SL +D C IQ S YLV L
Sbjct: 158 SNRDPGQGNDCKKVEIG--EDVFRHSLVRD-TCKLIQLSSSWNRKFEGELRYLVRSLNPL 214
Query: 107 ----IHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK 162
+ ++D ++AL F WA Y H S +Y +M++IL K + + +L M++
Sbjct: 215 QVCAVLLSQEDERNALRFFYWADRLWRYRHDSSVYLVMLEILSKTKLCQGAKRILRLMTR 274
Query: 163 GHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVEL 221
I + VM +S AG+ DA++ + G+E N N + L +++
Sbjct: 275 RRIQLCPEAFGFVMVSYSRAGRLRDAMKVLTLMQKAGVEPNLSICNTAIHILVMGNELKK 334
Query: 222 A-----RSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYS 276
A R V + I PN T+N I G+C +++VD+A I +M GC P +SY
Sbjct: 335 ALRFAERMVLIG----IAPNVVTYNCLIKGYCNVHQVDQAMELIDQMPSKGCSPDKVSYY 390
Query: 277 TIIQSYCRQYNFSKVYELLDEMQAQG-CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKI 335
T++ CR +++ EL+ +MQ P+ VTY +++ L+K G +EA+ I ++ +
Sbjct: 391 TVMGLLCRDKRLNEIRELIKKMQTDSKLLPDHVTYNSLIQMLSKHGHGDEALEILQEAEK 450
Query: 336 VGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHE 395
+ K D ++ +++ + ++Q+A + EM G PD T+ +++ F G +
Sbjct: 451 LRFKVDKVEYSAIVHAYCKEGKIQKAKELVS-EMFSKGCDPDVVTYTSVLDGFCRIGKLD 509
Query: 396 KAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYT 455
+A ++++M K HCKPN T+ L + GK+ E + +M + + + TY+
Sbjct: 510 QAKKMMQQMYK-HHCKPNAVTYTTFLNGLCRNGKSLEARKMM--NMSEEEWWTPNAITYS 566
Query: 456 LVIHGLCRANKCEWAYLLFKEMIGHDITP 484
+V+HGL R K A + +EMIG P
Sbjct: 567 VVVHGLRREGKLNEACDVVREMIGKGFFP 595
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 145/319 (45%), Gaps = 6/319 (1%)
Query: 81 DEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDW--KSALGIFRWAGSCPGYEHSSEIYE 138
+E+ + +K+ + + P H N LI AL I + A E Y
Sbjct: 403 NEIRELIKKMQTDSKLLPDHVTYNSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVE-YS 461
Query: 139 MMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTF 197
+V K ++ + + L+ EM SKG + T V+ F G+ + A + ++
Sbjct: 462 AIVHAYCKEGKIQKAKELVSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKH 521
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRVDEA 256
+ N T L+ LC+ GK AR + + + PNA T+++ +HG + +++EA
Sbjct: 522 HCKPNAVTYTTFLNGLCRNGKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEA 581
Query: 257 QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSY 316
++EM G G P + + ++ S CR + +LL E +GC NVV +TTV+
Sbjct: 582 CDVVREMIGKGFFPNPVEINLLVHSLCRDGKPREANQLLKECMNKGCAVNVVNFTTVIHG 641
Query: 317 LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
+ D E A+ + + M + PD+ + LI L + R++EA + ++M G+ P
Sbjct: 642 FCQKDDLEAALSLLDDMYLCNKHPDTVTYTALIDALAKTDRIEEATEL-TMKMLRQGLVP 700
Query: 377 DTSTFNTMITMFSHHGHHE 395
T+ ++I + G E
Sbjct: 701 SPVTYRSVIHQYCRKGRVE 719
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 166/354 (46%), Gaps = 11/354 (3%)
Query: 164 HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELAR 223
++VT N + K + Q + A+ D++ + G + + ++ LC++ ++ R
Sbjct: 350 NVVTYNCLIK---GYCNVHQVDQAMELIDQMPSKGCSPDKVSYYTVMGLLCRDKRLNEIR 406
Query: 224 SVF--LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQS 281
+ ++ S + P+ T+N I K DEA +QE + + YS I+ +
Sbjct: 407 ELIKKMQTDSKLLPDHVTYNSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVEYSAIVHA 466
Query: 282 YCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPD 341
YC++ K EL+ EM ++GC P+VVTYT+V+ + G ++A ++ ++M KP+
Sbjct: 467 YCKEGKIQKAKELVSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPN 526
Query: 342 SRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVL 401
+ + + L R + EA + + E P+ T++ ++ G +A V+
Sbjct: 527 AVTYTTFLNGLCRNGKSLEARKMMNMS-EEEWWTPNAITYSVVVHGLRREGKLNEACDVV 585
Query: 402 EEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGL 461
EM + PN + L+ S + GK E +QLL + +NK ++++ +T VIHG
Sbjct: 586 REMIG-KGFFPNPVEINLLVHSLCRDGKPREA-NQLLKECMNKG-CAVNVVNFTTVIHGF 642
Query: 462 CRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
C+ + E A L +M + P T ++D + + + E E MK L
Sbjct: 643 CQKDDLEAALSLLDDMYLCNKHPDTVTYTALIDALAKTDRIE--EATELTMKML 694
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 112/250 (44%), Gaps = 3/250 (1%)
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
F + + + R+ +A + M+ G P + +T I K + M
Sbjct: 283 AFGFVMVSYSRAGRLRDAMKVLTLMQKAGVEPNLSICNTAIHILVMGNELKKALRFAERM 342
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRV 358
G PNVVTY ++ ++A+ + ++M G PD + ++ L R R+
Sbjct: 343 VLIGIAPNVVTYNCLIKGYCNVHQVDQAMELIDQMPSKGCSPDKVSYYTVMGLLCRDKRL 402
Query: 359 QEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFH 418
E + + ++ + PD T+N++I M S HGH ++A +L+E KL V+ +
Sbjct: 403 NEIRELIKKMQTDSKLLPDHVTYNSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVE-YS 461
Query: 419 PLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
++ + K GK + +L+ +M +K D+ TYT V+ G CR K + A + ++M
Sbjct: 462 AIVHAYCKEGKIQKA-KELVSEMFSK-GCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMY 519
Query: 479 GHDITPRYQT 488
H P T
Sbjct: 520 KHHCKPNAVT 529
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 113/259 (43%), Gaps = 3/259 (1%)
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
A+ ++ M C ++ ++ SY R ++L MQ G PN+ T +
Sbjct: 265 AKRILRLMTRRRIQLCPEAFGFVMVSYSRAGRLRDAMKVLTLMQKAGVEPNLSICNTAIH 324
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
L + ++A+R E+M ++G P+ +NCLI +V +A+ + +MP G +
Sbjct: 325 ILVMGNELKKALRFAERMVLIGIAPNVVTYNCLIKGYCNVHQVDQAMELID-QMPSKGCS 383
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS 435
PD ++ T++ + + ++++M P+ T++ L++ K G DE L
Sbjct: 384 PDKVSYYTVMGLLCRDKRLNEIRELIKKMQTDSKLLPDHVTYNSLIQMLSKHGHGDEALE 443
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE 495
L + K +D Y+ ++H C+ K + A L EM P T +LD
Sbjct: 444 ILQE--AEKLRFKVDKVEYSAIVHAYCKEGKIQKAKELVSEMFSKGCDPDVVTYTSVLDG 501
Query: 496 VKQKHMYDAAEKIEAVMKK 514
+ D A+K+ M K
Sbjct: 502 FCRIGKLDQAKKMMQQMYK 520
>gi|357128238|ref|XP_003565781.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Brachypodium distachyon]
Length = 547
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 201/395 (50%), Gaps = 6/395 (1%)
Query: 95 AIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMR 154
+ S LV +++ + AL FRWA G+ +++E + +++ LGK++Q +
Sbjct: 122 GVNMSPELVAEVLRNLSNAGILALAFFRWAERQQGFRYTAESFHNLIEALGKIKQFRLVW 181
Query: 155 ALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLC 214
+L+E M +++ +T ++RR++ A + ++AV TF+++ +FGL+ + N L+D L
Sbjct: 182 SLVEAMRCRGLLSKDTFRLIVRRYARARKVKEAVETFEKMSSFGLKADLSDYNWLIDVLS 241
Query: 215 KEGKVELARSVFLELK--SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCV 272
K +V+ A ++F E+K P+ T+ + + GW + + QEM G P V
Sbjct: 242 KSKQVKKAHAIFKEMKRNGRFVPDLKTYTVLMEGWGHEKDLLMLKSVYQEMLDAGIKPDV 301
Query: 273 ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEK 332
++Y T+I S+C+ + ++ EM+A GC P+ Y +++ L +EA++ E
Sbjct: 302 VAYGTLISSFCKSGKCDEAIKVFREMEANGCMPSPHVYCMLINGLGSEERLDEALKYFEL 361
Query: 333 MKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
K G + N ++ R+S+ Q A + EM + G+ P+ T++ ++
Sbjct: 362 SKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVD-EMRKTGIGPNARTYDIILQYLIKSQ 420
Query: 393 HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
E+A++V + M +E C+P + T+ ++ + D L ++ M K L +
Sbjct: 421 KIEEAYNVFQRMG-MEGCEPQLNTYTMMVGMFCSNERVDMAL-KVWKQMKEKGVLPC-MH 477
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
++ +I+GLC N+ E A + F+EM+ I P Q
Sbjct: 478 MFSSLINGLCFENRLEEACVYFQEMLDKGIRPPGQ 512
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 117/263 (44%), Gaps = 7/263 (2%)
Query: 83 VFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWK--SALGIFRWAGSCPGYEHSSEIYEMM 140
+ +S+ Q+ + I+P LI F K A+ +FR G S +Y M+
Sbjct: 284 MLKSVYQEMLDAGIKPDVVAYGTLISSFCKSGKCDEAIKVFREM-EANGCMPSPHVYCML 342
Query: 141 VDILGKVRQMDQMRALLE-EMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGL 199
++ LG ++D+ E + G + + T V+ + + +++ A + DE+ G+
Sbjct: 343 INGLGSEERLDEALKYFELSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDEMRKTGI 402
Query: 200 EKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKINRVDEAQ 257
N T +++L L K K+E A +VF + ++ C P +T+ + + +C RVD A
Sbjct: 403 GPNARTYDIILQYLIKSQKIEEAYNVFQRMGMEGC-EPQLNTYTMMVGMFCSNERVDMAL 461
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
++MK G PC+ +S++I C + + EM +G P ++ + L
Sbjct: 462 KVWKQMKEKGVLPCMHMFSSLINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEAL 521
Query: 318 AKSGDFEEAIRITEKMKIVGSKP 340
+ G A + K+ + P
Sbjct: 522 IEGGRISLAQDMALKLDTLRKTP 544
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 84/180 (46%), Gaps = 1/180 (0%)
Query: 183 QWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFN 241
+ ++A++ F+ G T N ++ C+ K + A + E+ K+ I PNA T++
Sbjct: 351 RLDEALKYFELSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDEMRKTGIGPNARTYD 410
Query: 242 IFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ 301
I + K +++EA Q M GC P + +Y+ ++ +C ++ +M+ +
Sbjct: 411 IILQYLIKSQKIEEAYNVFQRMGMEGCEPQLNTYTMMVGMFCSNERVDMALKVWKQMKEK 470
Query: 302 GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
G P + ++++++ L EEA ++M G +P + F+ L L R+ A
Sbjct: 471 GVLPCMHMFSSLINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEALIEGGRISLA 530
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 93/207 (44%), Gaps = 4/207 (1%)
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
QG ++ ++ L K F + E M+ G F ++ RA +V+E
Sbjct: 155 QGFRYTAESFHNLIEALGKIKQFRLVWSLVEAMRCRGLLSKDTF-RLIVRRYARARKVKE 213
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
AV ++ +M G+ D S +N +I + S +KA + +EM + P+++T+ L
Sbjct: 214 AVETFE-KMSSFGLKADLSDYNWLIDVLSKSKQVKKAHAIFKEMKRNGRFVPDLKTYTVL 272
Query: 421 LKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH 480
++ + K L + +M++ + D+ Y +I C++ KC+ A +F+EM +
Sbjct: 273 MEG-WGHEKDLLMLKSVYQEMLDAG-IKPDVVAYGTLISSFCKSGKCDEAIKVFREMEAN 330
Query: 481 DITPRYQTCRLILDEVKQKHMYDAAEK 507
P ++++ + + D A K
Sbjct: 331 GCMPSPHVYCMLINGLGSEERLDEALK 357
>gi|116789117|gb|ABK25122.1| unknown [Picea sitchensis]
Length = 572
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 114/391 (29%), Positives = 191/391 (48%), Gaps = 10/391 (2%)
Query: 98 PSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALL 157
PS LV KL+ R + D K+A +F+WAGS P Y H+ +Y M+ ILG R+ D+ L+
Sbjct: 137 PSPNLVQKLLRRLQYDGKAAFRVFQWAGSQPDYSHTVSVYHTMISILGVHRKFDKGWGLI 196
Query: 158 EEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEG 217
+M + +V T+ +++R++ A A++TF + F L +++ LL LC+
Sbjct: 197 RKMHERAMVNRQTLMIMIKRYAAAHDARKAIKTFHAMDKFKLAADSDDFLCLLCALCRNM 256
Query: 218 KVELARSVFLELKSCIPPNAHTFNIFIHGWCKIN-RVDEAQWTIQEMKGHGCHPCVISYS 276
VE A + K C P +FN+ ++GWC I V + + +EM P SY+
Sbjct: 257 FVEEAEELIHFNKKCYPLETKSFNVILYGWCNIFVDVYQVKRLWEEMSNLCITPDAFSYT 316
Query: 277 TIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIV 336
T+I + + F V L DEM+ +G PN+ Y V+ L+K +EA+ + K++ +
Sbjct: 317 TVICCFSKAGKFYDVVRLYDEMKKKGFTPNLKVYNAVIYVLSKERCVKEALNLFNKIREM 376
Query: 337 GSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEK 396
G P++ + LIY L R + +EA Y Y +M G P ++ + G K
Sbjct: 377 GFHPNAVTYTYLIYLLCRTWKPEEA-YSYLDKMIMEGFVPTIDIYHAFFRFVENEGAICK 435
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTL 456
F + E C P ++T+ ++ C + +L +DM KH S D + + L
Sbjct: 436 LFDKMFENG----CAPTMETYIMSIRRCCSWSDYENAF-KLWNDM-EKHWFSADSSIHYL 489
Query: 457 VIHGLCRANKCEWAYLLFKEMI--GHDITPR 485
+++G K E A ++EM G + P+
Sbjct: 490 LLNGFLLNGKPEEACKCYREMKVNGFSLEPK 520
>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
Length = 577
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 159/316 (50%), Gaps = 9/316 (2%)
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCI 233
V+ F AGQ + A DE+ G++ + + L+ LC++G+++ A F +
Sbjct: 5 VINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEEC 64
Query: 234 PPNAHTFNIFIHGWCKINRVDEAQWTIQEMK-----GHGCHPCVISYSTIIQSYCRQYNF 288
PN T+N ++G CK NR+DE +M+ HGC P VISYST+I + C+
Sbjct: 65 SPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRV 124
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
K YE M+A GC PNVVTY++++ L K +EA + ++K P + ++N +
Sbjct: 125 DKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAV 184
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
+ R + E + + + M E G + FN M+ + EKA E + K
Sbjct: 185 VNGFKRQGKPSECLELL-LHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSG 243
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
KPNV T++ + K GK DE LL+ + +K ++ D+ TY+ +I G C+A + +
Sbjct: 244 K-KPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESK--VTPDVITYSSIIDGFCKAGRMD 300
Query: 469 WAYLLFKEMIGHDITP 484
A +F M+ H+ P
Sbjct: 301 KADDVFTRMMVHECIP 316
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 155/331 (46%), Gaps = 26/331 (7%)
Query: 183 QWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFN 241
+ E A + F+ L G + N T N+ + LCK GKV+ A + LE+ +S + P+ T++
Sbjct: 228 EQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYS 287
Query: 242 IFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ 301
I G+CK R+D+A M H C P +++ T++ + + + + ++M
Sbjct: 288 SIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNA 347
Query: 302 GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
G P + TY +M + + E A+ I KMK +PD+ + LI L RA RV EA
Sbjct: 348 GFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEA 407
Query: 362 VYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCK---------- 411
V M + V P+ + + ++ + G ++A VL+ N +E CK
Sbjct: 408 KEFLDV-MEADNVVPNGAICHALVEVLCKQGEVDEACSVLD--NVVEICKAGEPDEAVEV 464
Query: 412 ----------PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGL 461
P+ T+ +L+S + D +++ + + + + TYTL+I
Sbjct: 465 IEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEF--EKMASRGCAPGLVTYTLLIGEA 522
Query: 462 CRANKCEWAYLLFKEMIGHDITPRYQTCRLI 492
C A+ + A+ +F+ M+ TP+ QT R +
Sbjct: 523 CSADMADDAFRIFEAMVAAGFTPQAQTMRTL 553
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 174/397 (43%), Gaps = 25/397 (6%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTI--AKVMRRFSGAGQWEDAVRTFDEL 194
Y ++D L KV ++D+ +LL ++ KG + + V+ F G+ + + +
Sbjct: 146 YSSLIDGLCKVDRVDEAYSLLMQL-KGEDMVPRAMYYNAVVNGFKRQGKPSECLELLLHM 204
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRV 253
G N N +L L K + E A F L KS PN T+N+ +HG CK +V
Sbjct: 205 KEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKV 264
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
DEA + EM P VI+YS+II +C+ K ++ M C P+ VT+ T+
Sbjct: 265 DEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTL 324
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
+ ++ EA R+ E M G P + +N L+ + A V+ A+ +Y +M
Sbjct: 325 LHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYH-KMKRKK 383
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
PD +T+ +I ++A L+ M + ++ PN H L++ K G+ DE
Sbjct: 384 RQPDANTYAPLIQCLCRARRVDEAKEFLDVM-EADNVVPNGAICHALVEVLCKQGEVDEA 442
Query: 434 LS------------------QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFK 475
S ++++ MV K + D TY V+ LC ++ + A F+
Sbjct: 443 CSVLDNVVEICKAGEPDEAVEVIEQMVLK-GVRPDEATYVAVLRSLCGLDRVDSAIAEFE 501
Query: 476 EMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
+M P T L++ E M D A +I M
Sbjct: 502 KMASRGCAPGLVTYTLLIGEACSADMADDAFRIFEAM 538
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 144/309 (46%), Gaps = 45/309 (14%)
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+ I+G+CK +VD+A + EMK G V+ +ST+IQ CR+ ++ E L++ +
Sbjct: 2 YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRK---GRIDEALEQFK 58
Query: 300 AQG--CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIV-----GSKPDSRFFNCLIYTL 352
+ G C PNV+TY TV++ L K+ +E + + + M+ G +PD ++ +I L
Sbjct: 59 SMGEECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDAL 118
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
+A RV +A Y Y M G AP+ T++++I ++A+ +L ++ K E P
Sbjct: 119 CKAQRVDKA-YEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQL-KGEDMVP 176
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLD--------------------------------- 439
++ ++ + GK ECL LL
Sbjct: 177 RAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFF 236
Query: 440 DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQK 499
+ + K ++ TY + +HGLC+A K + AY + EM+ +TP T I+D +
Sbjct: 237 ERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKA 296
Query: 500 HMYDAAEKI 508
D A+ +
Sbjct: 297 GRMDKADDV 305
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 344 FFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEE 403
+ +I +A +V +A + EM E GV D +T+I G ++A +
Sbjct: 1 MYTTVINGFCKAGQVDQAFELLD-EMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKS 59
Query: 404 MNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS----LDITTYTLVIH 459
M E C PNV T++ ++ K + DE L +L DDM ++ S D+ +Y+ VI
Sbjct: 60 MG--EECSPNVITYNTVVNGLCKANRIDEGL-ELFDDMEKRYEASHGCEPDVISYSTVID 116
Query: 460 GLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
LC+A + + AY FK M P T ++D
Sbjct: 117 ALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLID 151
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 103/250 (41%), Gaps = 27/250 (10%)
Query: 106 LIHRFKDDWKSALGIFRW------AGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEE 159
L+H F + KS FR AG PG + Y +++D + ++ + +
Sbjct: 324 LLHGFSEHKKSREA-FRVHEDMVNAGFIPGLQ----TYNVLMDCVCGADSVESALEIYHK 378
Query: 160 MS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
M K NT A +++ A + ++A D + + N + L++ LCK+G+
Sbjct: 379 MKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGE 438
Query: 219 VELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTI 278
V+ A SV + CK DEA I++M G P +Y +
Sbjct: 439 VDEACSVLDNVVE---------------ICKAGEPDEAVEVIEQMVLKGVRPDEATYVAV 483
Query: 279 IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
++S C ++M ++GC P +VTYT ++ + ++A RI E M G
Sbjct: 484 LRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADDAFRIFEAMVAAGF 543
Query: 339 KPDSRFFNCL 348
P ++ L
Sbjct: 544 TPQAQTMRTL 553
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 114/430 (26%), Positives = 207/430 (48%), Gaps = 33/430 (7%)
Query: 105 KLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGH 164
+L RF D S +CP ++HS + + M+ IL + R++ +A++ M +
Sbjct: 112 QLGQRFIDSITS---------NCPNFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKS 162
Query: 165 IVTLNTIAK------------------VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETM 206
V+ I + ++R + A + + F L + GL +
Sbjct: 163 GVSRVEIVESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINAC 222
Query: 207 NLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKG 265
N LL L K G V+LA ++ E+ +S + N +T NI I+ CK +++ + + +M+
Sbjct: 223 NSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEE 282
Query: 266 HGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEE 325
G P V++Y+T+I +YCRQ + +EL+D M +G P V TY +++ L K+G +
Sbjct: 283 KGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLR 342
Query: 326 AIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMI 385
A + ++M +G PD+ +N L+ R + +A ++ EMP GV PD +F+ +I
Sbjct: 343 AKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFD-EMPSQGVVPDLVSFSALI 401
Query: 386 TMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKH 445
+ S +G ++A +M K P+ + L+ + G E L ++ D+M+ +
Sbjct: 402 GLLSKNGCLDQALKYFRDM-KNAGLAPDNVIYTILIGGFCRNGVMSEAL-KVRDEMLEQG 459
Query: 446 HLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT-CRLILDEVKQKHMYDA 504
+ LD+ TY +++GLC+ A LF EM + P + T LI K +M A
Sbjct: 460 CV-LDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKA 518
Query: 505 AEKIEAVMKK 514
E ++++
Sbjct: 519 VTLFEMMIQR 528
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 134/270 (49%), Gaps = 3/270 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +++ L K + + + L EM+ +G T ++ +S G AV F+ +
Sbjct: 467 YNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMI 526
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVD 254
L+ + T N L+D CK ++E ++ ++ S I PN ++ I I+G+C + V
Sbjct: 527 QRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVS 586
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA EM G +I+ +TI++ YCR N K E L M +G P+ +TY T++
Sbjct: 587 EAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLI 646
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
+ K + + A + KM+ G PD +N ++ R R+QEA + ++M E GV
Sbjct: 647 NGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELI-MLKMIERGV 705
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
PD ST+ ++I + ++AF V +EM
Sbjct: 706 NPDRSTYTSLINGHVTQNNLKEAFRVHDEM 735
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 159/327 (48%), Gaps = 11/327 (3%)
Query: 186 DAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFI 244
DA R FDE+ + G+ + + + L+ L K G ++ A F ++K+ + P+ + I I
Sbjct: 377 DAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILI 436
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
G+C+ + EA EM GC V++Y+TI+ C++ S+ EL EM +G
Sbjct: 437 GGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVF 496
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
P+ T+TT+++ +K G+ +A+ + E M KPD +N LI + S +++ +
Sbjct: 497 PDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNEL 556
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
+ +M + P+ ++ +I + + G +AF + +EM + + + + T + ++K
Sbjct: 557 WN-DMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVE-KGFEATIITCNTIVKGY 614
Query: 425 FKTG---KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHD 481
+ G K DE LS +L + D TY +I+G + + A+ L +M
Sbjct: 615 CRAGNAVKADEFLSNML-----LKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSG 669
Query: 482 ITPRYQTCRLILDEVKQKHMYDAAEKI 508
+ P T +IL+ ++ AE I
Sbjct: 670 LLPDVITYNVILNGFSRQGRMQEAELI 696
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 169/352 (48%), Gaps = 10/352 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVM-RRFSGAGQWEDAVRTFDELG 195
+ ++ +L K +DQ +M + N I ++ F G +A++ DE+
Sbjct: 397 FSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEML 456
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
G + T N +L+ LCKE + A +F E+ + + P+ +TF I+G+ K ++
Sbjct: 457 EQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMN 516
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
+A + M P V++Y+T+I +C+ KV EL ++M ++ PN ++Y ++
Sbjct: 517 KAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILI 576
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
+ G EA R+ ++M G + N ++ RA +A + M G+
Sbjct: 577 NGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADE-FLSNMLLKGI 635
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCK--PNVQTFHPLLKSCFKTGKTDE 432
PD T+NT+I F + ++AF ++ NK+E+ P+V T++ +L + G+ E
Sbjct: 636 VPDGITYNTLINGFIKEENMDRAFALV---NKMENSGLLPDVITYNVILNGFSRQGRMQE 692
Query: 433 CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
++L+ + + ++ D +TYT +I+G N + A+ + EM+ P
Sbjct: 693 --AELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVP 742
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 121/273 (44%), Gaps = 13/273 (4%)
Query: 78 SSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDD--WKSALGIFRWAGSCPGYEHSSE 135
S DE+F + + + P Y LI+ + D A+ +F +
Sbjct: 481 SEADELFTEMTE----RGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQ-RNLKPDVV 535
Query: 136 IYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAK--VMRRFSGAGQWEDAVRTFDE 193
Y ++D K +M+++ L +M I N I+ ++ + G +A R +DE
Sbjct: 536 TYNTLIDGFCKGSEMEKVNELWNDMISRRIYP-NHISYGILINGYCNMGCVSEAFRLWDE 594
Query: 194 LGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE--LKSCIPPNAHTFNIFIHGWCKIN 251
+ G E T N ++ C+ G A FL L I P+ T+N I+G+ K
Sbjct: 595 MVEKGFEATIITCNTIVKGYCRAGNAVKADE-FLSNMLLKGIVPDGITYNTLINGFIKEE 653
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
+D A + +M+ G P VI+Y+ I+ + RQ + ++ +M +G P+ TYT
Sbjct: 654 NMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYT 713
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRF 344
++++ + +EA R+ ++M G PD +F
Sbjct: 714 SLINGHVTQNNLKEAFRVHDEMLQRGFVPDDKF 746
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 80/179 (44%), Gaps = 6/179 (3%)
Query: 337 GSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEK 396
GS P F+ L+ T +A +++E ++V + G+ + N+++ G +
Sbjct: 181 GSNP--LVFDLLVRTYVQARKLREGCEAFRV-LKSKGLCVSINACNSLLGGLVKVGWVDL 237
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTL 456
A+ + +E+ + + NV T + ++ + K K + S L DM K D+ TY
Sbjct: 238 AWEIYQEVVR-SGVQVNVYTLNIMINALCKNQKIENTKS-FLSDMEEKGVFP-DVVTYNT 294
Query: 457 VIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
+I+ CR E A+ L M G + P T I++ + + Y A+ + M K+
Sbjct: 295 LINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKI 353
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 185/352 (52%), Gaps = 11/352 (3%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
+Y MV Q+D R L+ +M + T NT+ +R G G+ +A+ +++
Sbjct: 136 VYNAMVAGYCGAGQLDAARRLVADMPVEPDAYTYNTL---IRGLCGRGRTSNALAVLEDM 192
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINR 252
G + T +LL+ CK + A + E+ K C P+ T+N+ ++G C+ R
Sbjct: 193 FRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCA-PDIVTYNVVLNGICQEGR 251
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
V++A ++ + +GC P +SY+ +++ + +L++EM +GCPPNVVT+
Sbjct: 252 VEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNM 311
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN 372
++S+L + G E A+ + E+M G P+S +N L++ + ++ +A+ ++ M
Sbjct: 312 LISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVEL-MVSR 370
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
G PD ++NT++T +G + A +L ++ K + C P + +++ ++ K GKT E
Sbjct: 371 GCYPDIVSYNTLLTALCRNGEVDVAIELLHQL-KDKGCSPVLISYNTVIDGLTKAGKTKE 429
Query: 433 CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
L +LLD+M +K L DI TY+ + GLCR ++ E A F ++ I P
Sbjct: 430 AL-ELLDEMTSK-GLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRP 479
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 175/344 (50%), Gaps = 12/344 (3%)
Query: 172 AKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS 231
A ++++ +G+ DA R G + N ++ C G+++ AR + ++
Sbjct: 108 AALIKKLCASGRTADARRVLAASG-----PDVMVYNAMVAGYCGAGQLDAARRLVADMP- 161
Query: 232 CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKV 291
+ P+A+T+N I G C R A +++M GC P V++Y+ ++++ C++ + +
Sbjct: 162 -VEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQA 220
Query: 292 YELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYT 351
+LLDEM +GC P++VTY V++ + + G E+A+ + + G +P++ +N ++
Sbjct: 221 MKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKG 280
Query: 352 LGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCK 411
L A R ++A + + EM G P+ TFN +I+ G E A VLE+M + C
Sbjct: 281 LFTAERWEDAEKLME-EMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQY-GCT 338
Query: 412 PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAY 471
PN +++PLL + K K + + + ++ MV++ DI +Y ++ LCR + + A
Sbjct: 339 PNSLSYNPLLHAFCKQKKIHKAM-EFVELMVSRGCYP-DIVSYNTLLTALCRNGEVDVAI 396
Query: 472 LLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEAVMKK 514
L ++ +P + ++D + K +A E ++ + K
Sbjct: 397 ELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSK 440
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/436 (24%), Positives = 191/436 (43%), Gaps = 56/436 (12%)
Query: 41 IESYCSDGARLDHHQVLCVDSPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSH 100
I+ C+ G D +VL P + + +++ + G+ + + + L D ++P
Sbjct: 111 IKKLCASGRTADARRVLAASGPDVMVYNAMVAG-YCGAGQLDAARRLVADM---PVEPDA 166
Query: 101 YLVNKLIHRF--KDDWKSALGI----FRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMR 154
Y N LI + +AL + FR G P Y ++++ K Q
Sbjct: 167 YTYNTLIRGLCGRGRTSNALAVLEDMFRR-GCLP----DVVTYTILLEATCKRSGYKQAM 221
Query: 155 ALLEEM-SKG---HIVTLNTIAK--------------------------------VMRRF 178
LL+EM KG IVT N + V++
Sbjct: 222 KLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGL 281
Query: 179 SGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK--SCIPPN 236
A +WEDA + +E+ G N T N+L+ LC+ G VE A V ++ C P N
Sbjct: 282 FTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTP-N 340
Query: 237 AHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLD 296
+ ++N +H +CK ++ +A ++ M GC+P ++SY+T++ + CR ELL
Sbjct: 341 SLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLH 400
Query: 297 EMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRAS 356
+++ +GC P +++Y TV+ L K+G +EA+ + ++M G +PD ++ + L R
Sbjct: 401 QLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCRED 460
Query: 357 RVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQT 416
R++EAV + ++ + G+ P + +N ++ A + M C PN T
Sbjct: 461 RIEEAVRTF-CKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMIS-SGCMPNEST 518
Query: 417 FHPLLKSCFKTGKTDE 432
+ L++ G E
Sbjct: 519 YTILVEGLAYEGLVKE 534
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 107/274 (39%), Gaps = 45/274 (16%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KG---HIVTLNTIAKVMRRFSGAGQW 184
G E ++ Y +++ L + + L+EEM+ KG ++VT N + + R G
Sbjct: 266 GCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCR---RGLV 322
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL---KSCIP------- 234
E A+ +++ +G N+ + N LL CK+ K+ A F+EL + C P
Sbjct: 323 EPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAME-FVELMVSRGCYPDIVSYNT 381
Query: 235 ---------------------------PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG 267
P ++N I G K + EA + EM G
Sbjct: 382 LLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKG 441
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
P +I+YSTI CR+ + ++Q G P Y ++ L K + AI
Sbjct: 442 LQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAI 501
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
+ M G P+ + L+ L V+EA
Sbjct: 502 DLFAYMISSGCMPNESTYTILVEGLAYEGLVKEA 535
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 78/168 (46%), Gaps = 2/168 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ L + ++D LL ++ KG L + V+ + AG+ ++A+ DE+
Sbjct: 379 YNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMT 438
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVD 254
+ GL+ + T + + LC+E ++E A F +++ I P A +N + G CK
Sbjct: 439 SKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETH 498
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
A M GC P +Y+ +++ + + EL ++ ++G
Sbjct: 499 NAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRG 546
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 200/392 (51%), Gaps = 13/392 (3%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQW 184
G + + ++ ++++L + ++ + ++ EM+ + +VTLNT+ K + R A Q
Sbjct: 157 GVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCR---AHQV 213
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIF 243
AV +E+ + G+ + T L+ +EG +E A V ++ ++ P T N+
Sbjct: 214 RTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVL 273
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
I+G+CK+ RV++A IQ+ G P ++Y+T + C+ + S +++D M +G
Sbjct: 274 INGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGH 333
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
P+V TY TV++ L+K+G+ +EA I +M G PD+ FN LI L +R++EA+
Sbjct: 334 DPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALD 393
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
+ + E+ G++PD TFN +I G + EEM K C P+ T++ L+
Sbjct: 394 LAR-ELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEM-KSSGCTPDEVTYNILIDH 451
Query: 424 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
GK L LL++M + TY +I LC+ + E A +F +M I+
Sbjct: 452 LCSMGKLGNALD-LLNEM-ESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGIS 509
Query: 484 PRYQTCRLILDEV-KQKHMYDAAEKIEAVMKK 514
T ++D + K K + DA E IE ++K+
Sbjct: 510 RSAVTFNTLIDGLCKAKRIDDATELIEQMVKE 541
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 189/391 (48%), Gaps = 9/391 (2%)
Query: 109 RFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVT 167
R + D ++AL + A + + SS +YE +V LG D M L+ EM + GH V
Sbjct: 64 REQSDPEAALRMLNSALAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRREGHQVR 123
Query: 168 LNTIAKVMRRFSGAGQWEDAVR-TFDELG--TFGLEKNTETMNLLLDTLCKEGKVELARS 224
+ + ++ +++DAV ++L TFG++ +T N LL+ L + K++L S
Sbjct: 124 AVVVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLES 183
Query: 225 VFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYC 283
V+ E+ I P+ T N I C+ ++V A ++EM HG P +++T++Q +
Sbjct: 184 VYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFI 243
Query: 284 RQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSR 343
+ + + +M GC P VT +++ K G E+A+ ++ G +PD
Sbjct: 244 EEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQV 303
Query: 344 FFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEE 403
+N ++ L + V A+ V + M + G PD T+NT+I S +G ++A ++ +
Sbjct: 304 TYNTFVHGLCQNGHVSHALKVMDL-MLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQ 362
Query: 404 MNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCR 463
M C P+ TF+ L+ + + +E L L + LS D+ T+ ++I+ LC+
Sbjct: 363 MVD-RGCLPDTTTFNTLIVALSSQNRLEEALD--LARELTVKGLSPDVYTFNILINALCK 419
Query: 464 ANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
LF+EM TP T +++D
Sbjct: 420 VGDPHLGIRLFEEMKSSGCTPDEVTYNILID 450
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/259 (31%), Positives = 144/259 (55%), Gaps = 6/259 (2%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTF 240
G+ +A+ +E+ + G ++T T N ++D LCK+ ++E A VF ++ + I +A TF
Sbjct: 456 GKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTF 515
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
N I G CK R+D+A I++M G P I+Y++I+ YC+Q N K ++L+ M A
Sbjct: 516 NTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTA 575
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
G +VVTY T+++ L K+G + A+++ M+I G +P + +N +I +L R + +++
Sbjct: 576 NGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRD 635
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMI-TMFSHHGHHEKAFHVLEEM-NKLEHCKPNVQTFH 418
A+ +++ EM E G PD T+ + ++ G ++AF L EM NK P +F
Sbjct: 636 ALNLFR-EMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNK--GFMPEFSSFR 692
Query: 419 PLLKSCFKTGKTDECLSQL 437
L + G D +S +
Sbjct: 693 MLAEGLLNLGMDDYLISAI 711
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 173/394 (43%), Gaps = 50/394 (12%)
Query: 98 PSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDIL---GKVR-QMD 151
P+ VN LI+ + + ALG + G+E Y V L G V +
Sbjct: 265 PTGVTVNVLINGYCKMGRVEDALGYIQQE-IADGFEPDQVTYNTFVHGLCQNGHVSHALK 323
Query: 152 QMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLD 211
M +L+E + T NT+ + S G+ ++A +++ G +T T N L+
Sbjct: 324 VMDLMLQEGHDPDVFTYNTVINCL---SKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIV 380
Query: 212 TLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHP 270
L + ++E A + EL + P+ +TFNI I+ CK+ +EMK GC P
Sbjct: 381 ALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTP 440
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRIT 330
++Y+ +I C +LL+EM++ GCP + VTY T++ L K EEA +
Sbjct: 441 DEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVF 500
Query: 331 EKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSH 390
++M G + FN LI L +A R+ +A + + +M + G+ P+ T+N+++T +
Sbjct: 501 DQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIE-QMVKEGLQPNNITYNSILTHYCK 559
Query: 391 HGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLD 450
G+ +KA +L + + + +D
Sbjct: 560 QGNIKKAADIL--------------------------------------ETMTANGFEID 581
Query: 451 ITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
+ TY +I+GLC+A + + A L + M I P
Sbjct: 582 VVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRP 615
>gi|359492357|ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Vitis vinifera]
Length = 476
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 113/452 (25%), Positives = 211/452 (46%), Gaps = 21/452 (4%)
Query: 71 ISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGY 130
I K+ + + E+ SL + + I+ S +V ++ RF++ A F WAG Y
Sbjct: 18 ICKIMISCPKLELDTSLSE----SGIRVSPIVVENVLKRFENAGMLAYQFFEWAGKQRNY 73
Query: 131 EHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRT 190
HS Y M++ L K+RQ M L+ +M I+ + T +MR+++ + + ++AV T
Sbjct: 74 THSIRAYHTMIESLAKIRQYQIMWDLVNKMRSLKILNVETFCIIMRKYARSQKVKEAVYT 133
Query: 191 FDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKI 250
F+ + + + N N LL LCK V A+ +F +K P++ T++I + GW K
Sbjct: 134 FNIMEKYDVPPNLAAFNSLLSALCKSKNVVKAQEIFNGMKDQFIPDSKTYSILLEGWGKA 193
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
+ +A+ +EM GC P +++Y ++ C+ + ++ EM + C P Y
Sbjct: 194 PNLPKAREIFREMVDMGCDPDIVTYGIMVDILCKAGRVDEAVGIVKEMDSSVCKPTSFIY 253
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
+ ++ E+A+ M+ + D +N LI + ++++ A V EM
Sbjct: 254 SVLVHTYGIENRIEDAVYTFLDMERNEIEADVAVYNALIGAFCKVNKLKNAYRVLN-EMD 312
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKT 430
G+ P++ T N ++ G ++AF V M K+ C P+ T+ ++K + K
Sbjct: 313 CKGIRPNSRTCNIILNSLISCGDTDEAFRVFRRMIKV--CDPDADTYTMMIKMFCENDKL 370
Query: 431 DECLS----QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
+ L L V H T++++I+GLC+ A +L +EMI I P
Sbjct: 371 EMALKVWKYMRLKQFVPSMH------TFSVLINGLCKKGNASKACILLEEMIEKGIRPSS 424
Query: 487 QTC----RLILDEVKQKHMYDAAEKIEAVMKK 514
T +L++ E ++ + EK+ ++K+
Sbjct: 425 VTFGKLKQLLIKEGREDVLEFLQEKMNLLVKE 456
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 125/282 (44%), Gaps = 19/282 (6%)
Query: 61 SPRLPDIDVIISK-VHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALG 119
+P LP I + V +G D V + D +C A + A+G
Sbjct: 193 APNLPKAREIFREMVDMGCDPDIVTYGIMVDILCKAGRVDE----------------AVG 236
Query: 120 IFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVMRRF 178
I + S + +S IY ++V G +++ +M + I + ++ F
Sbjct: 237 IVKEMDSSVC-KPTSFIYSVLVHTYGIENRIEDAVYTFLDMERNEIEADVAVYNALIGAF 295
Query: 179 SGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAH 238
+ ++A R +E+ G+ N+ T N++L++L G + A VF + P+A
Sbjct: 296 CKVNKLKNAYRVLNEMDCKGIRPNSRTCNIILNSLISCGDTDEAFRVFRRMIKVCDPDAD 355
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
T+ + I +C+ ++++ A + M+ P + ++S +I C++ N SK LL+EM
Sbjct: 356 TYTMMIKMFCENDKLEMALKVWKYMRLKQFVPSMHTFSVLINGLCKKGNASKACILLEEM 415
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
+G P+ VT+ + L K G + + EKM ++ +P
Sbjct: 416 IEKGIRPSSVTFGKLKQLLIKEGREDVLEFLQEKMNLLVKEP 457
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 188/368 (51%), Gaps = 17/368 (4%)
Query: 117 ALGIFRWAGSCPGYEHSSEIYEMMVDILGK----VRQMDQMRALLEEMSKGHIVTLNTIA 172
A+ F WAG GY+H Y ++DIL K R + LL ++VT +
Sbjct: 10 AIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKIL- 68
Query: 173 KVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC 232
+R AGQ A+ L F + + N+L+ L K+G + A +F ++S
Sbjct: 69 --IRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESS 126
Query: 233 -IPPNAHTFNIFIHGWCKINRVDEAQWTIQEM--KGHGCHPCVISYSTIIQSYCRQYNFS 289
+ P T+N I G CK +++A+ ++EM KG P +++Y+T+I ++ R
Sbjct: 127 RVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIR 186
Query: 290 KVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
+ ++M+A G P+V+T ++S + K GD EEA+ I + MK+ G PD +N +I
Sbjct: 187 EACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSII 246
Query: 350 YTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH 409
+ L A +V EA + + +PD TFNT++ F G +A VLEEM + E+
Sbjct: 247 HALCVAGKVVEAAEILKTM----SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCR-EN 301
Query: 410 CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEW 469
P+V T+ L+ + G+ + LL+++V + ++ D+ YT ++ GLC++ + E
Sbjct: 302 ILPDVITYTILVNGLCRVGQV-QVAFYLLEEIVRQGYIP-DVIAYTSLVDGLCKSGEIEE 359
Query: 470 AYLLFKEM 477
A+ L KEM
Sbjct: 360 AHKLVKEM 367
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 188/416 (45%), Gaps = 18/416 (4%)
Query: 95 AIQPSHYLVNKLIHRF-KD-DWKSALGIF---RWAGSCPGYEHSSEIYEMMVDILGKVRQ 149
I P N L+ KD D + AL I + AG P + I + + GKV +
Sbjct: 199 GINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALC-VAGKVVE 257
Query: 150 MDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNL 208
+ +L+ MS +VT NT+ + F AG A+ +E+ + + T +
Sbjct: 258 AAE---ILKTMSCSPDLVTFNTL---LDGFCKAGMLPRALEVLEEMCRENILPDVITYTI 311
Query: 209 LLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG 267
L++ LC+ G+V++A + E+ + P+ + + G CK ++EA ++EM G
Sbjct: 312 LVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRG 371
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
C V+ YS+++ YCR N K E+L EM + P + TY V+ L K G +A+
Sbjct: 372 CRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAV 431
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITM 387
+ + G PD +N LI L +A+RV+EA + EM G P+ T +++
Sbjct: 432 SLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLAD-EMASRGCFPNDVTLGSVVFG 490
Query: 388 FSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHL 447
G + A+ ++ EM++ H PNV + L+ K+ + D+ L D + +
Sbjct: 491 LCRVGRVDDAWSLVVEMSRKRHA-PNVVVYTSLIDGLCKSDRMDDACMVL--DAMRGQGV 547
Query: 448 SLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYD 503
+LD Y +I + + A ++ EM+ P T + + + +++
Sbjct: 548 ALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGSTSKTLEEAAMSNSVFE 603
>gi|297719649|ref|NP_001172186.1| Os01g0151900 [Oryza sativa Japonica Group]
gi|9663979|dbj|BAB03620.1| hypothetical protein [Oryza sativa Japonica Group]
gi|13872936|dbj|BAB44041.1| hypothetical protein [Oryza sativa Japonica Group]
gi|215768885|dbj|BAH01114.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255672883|dbj|BAH90916.1| Os01g0151900 [Oryza sativa Japonica Group]
Length = 534
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/411 (26%), Positives = 208/411 (50%), Gaps = 15/411 (3%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM- 160
+V K++ + + +WK AL F+WA P Y H S Y M+DILG+++++ MR L +E+
Sbjct: 114 VVLKVLQKQRSNWKVALSFFKWAAGLPQYNHGSRAYTEMLDILGRMKKVRLMRQLFDEIP 173
Query: 161 --SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
S+ +VT A ++ R++GA + ++A+ F + +G E + +LL +LC+
Sbjct: 174 VESRQSVVTNRMFAVLLNRYAGAHKVQEAIDMFYKRKDYGFELDLVGFQILLMSLCRYKH 233
Query: 219 VELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTI 278
VE A ++FL+ K PP ++NI ++GWC + +A+ E+ P + +Y T
Sbjct: 234 VEEAEALFLQKKDEFPPVIKSWNIILNGWCVKGSLADAKRVWNEIIASKLKPDLFTYGTF 293
Query: 279 IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
I S + S +L M +G P+V ++ L EA+ I +M G
Sbjct: 294 INSLTKSGKLSTAVKLFTSMWEKGINPDVAICNCIIDQLCFKKRIPEALEIFGEMNDRGC 353
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
+ D +N LI + +R+ E VY +M GV+P+ T++ ++ EK
Sbjct: 354 QADVATYNTLIKHFCKINRM-EKVYELLDDMEVKGVSPNNMTYSYILKT------TEKPK 406
Query: 399 HVLEEMNKLEH--CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTL 456
V+ M ++E C+ + T++ L+ + + + ++ + QL+ D + ++ D ++T+
Sbjct: 407 DVISLMQRMEKSGCRLDSDTYN-LILNLYVSWDYEKGV-QLVWDEMERNGSGPDQRSFTI 464
Query: 457 VIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEK 507
++HGL +K + A ++ M +TP +T +L++ ++ K A E+
Sbjct: 465 MVHGLHSHDKLDEALHYYRTMESRGMTPEPRT-KLLVKAIRMKKDEPATEE 514
>gi|125569053|gb|EAZ10568.1| hypothetical protein OsJ_00400 [Oryza sativa Japonica Group]
Length = 514
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/411 (26%), Positives = 208/411 (50%), Gaps = 15/411 (3%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM- 160
+V K++ + + +WK AL F+WA P Y H S Y M+DILG+++++ MR L +E+
Sbjct: 94 VVLKVLQKQRSNWKVALSFFKWAAGLPQYNHGSRAYTEMLDILGRMKKVRLMRQLFDEIP 153
Query: 161 --SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
S+ +VT A ++ R++GA + ++A+ F + +G E + +LL +LC+
Sbjct: 154 VESRQSVVTNRMFAVLLNRYAGAHKVQEAIDMFYKRKDYGFELDLVGFQILLMSLCRYKH 213
Query: 219 VELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTI 278
VE A ++FL+ K PP ++NI ++GWC + +A+ E+ P + +Y T
Sbjct: 214 VEEAEALFLQKKDEFPPVIKSWNIILNGWCVKGSLADAKRVWNEIIASKLKPDLFTYGTF 273
Query: 279 IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
I S + S +L M +G P+V ++ L EA+ I +M G
Sbjct: 274 INSLTKSGKLSTAVKLFTSMWEKGINPDVAICNCIIDQLCFKKRIPEALEIFGEMNDRGC 333
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
+ D +N LI + +R+ E VY +M GV+P+ T++ ++ EK
Sbjct: 334 QADVATYNTLIKHFCKINRM-EKVYELLDDMEVKGVSPNNMTYSYILKT------TEKPK 386
Query: 399 HVLEEMNKLEH--CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTL 456
V+ M ++E C+ + T++ L+ + + + ++ + QL+ D + ++ D ++T+
Sbjct: 387 DVISLMQRMEKSGCRLDSDTYN-LILNLYVSWDYEKGV-QLVWDEMERNGSGPDQRSFTI 444
Query: 457 VIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEK 507
++HGL +K + A ++ M +TP +T +L++ ++ K A E+
Sbjct: 445 MVHGLHSHDKLDEALHYYRTMESRGMTPEPRT-KLLVKAIRMKKDEPATEE 494
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/292 (32%), Positives = 154/292 (52%), Gaps = 5/292 (1%)
Query: 205 TMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
T +++D CK +++ A + F +++ + PN T+N+ ++G CK +A ++EM+
Sbjct: 9 TWTIIIDGFCKANQLKQALACFEKMREFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMR 68
Query: 265 -GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ-GCPPNVVTYTTVMSYLAKSGD 322
G P +++YST+I +C+Q + E+L EM + G P+VVTYT+V+ L + G
Sbjct: 69 DGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGK 128
Query: 323 FEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFN 382
+ A + +MK+ G +PD F+ LI A +V EA+ +Y+ + + PD T+
Sbjct: 129 MDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYT 188
Query: 383 TMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMV 442
+I F G+ EKA +L M C PNV T+ LL K G D+ L L M
Sbjct: 189 ALIDGFCKSGNLEKAMKMLGVMEG-RKCVPNVVTYSSLLHGLCKAGDLDQAL-DLFRRMT 246
Query: 443 NKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
+K + ++ TYT +IHGLC A+K + A LL EM P + +LD
Sbjct: 247 SKGCVP-NVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLD 297
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/459 (24%), Positives = 215/459 (46%), Gaps = 10/459 (2%)
Query: 61 SPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSAL 118
+P +V+++ + + ++ LK+ ++ P + +I+ F + + A
Sbjct: 38 APNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRAC 97
Query: 119 GIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRR 177
I R + G Y +VD L + +MD+ ++ EM KG T + ++
Sbjct: 98 EILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITG 157
Query: 178 FSGAGQWEDAVRTFDE-LGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIP 234
+ A + ++A++ + E L + + + T L+D CK G +E A + +E + C+P
Sbjct: 158 WCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVP 217
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYEL 294
N T++ +HG CK +D+A + M GC P V++Y+T+I C + L
Sbjct: 218 -NVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLL 276
Query: 295 LDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGR 354
+DEM A CPP+ V+Y ++ + G EEA ++ ++M PD + CL+
Sbjct: 277 MDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCN 336
Query: 355 ASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNV 414
ASR++EA ++ + G+ PD T++ ++ +S +A ++EM + PN
Sbjct: 337 ASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIA-RNVAPNA 395
Query: 415 QTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLF 474
T+ L+ K G+ D + ++L +MVNK + + T+ VI LCR + A+ L
Sbjct: 396 VTYSSLIDGLCKAGRVDHAM-EVLKNMVNK-RVEPSVGTFNSVIGALCRLGDMDEAWKLL 453
Query: 475 KEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
M H + P T +L+ + + A ++ VM+
Sbjct: 454 VAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMR 492
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/462 (23%), Positives = 213/462 (46%), Gaps = 26/462 (5%)
Query: 65 PDIDVIISKVHVGSSEDEVFQSLKQDHVC--------NAIQPSHYLVNKLIHRFKDDWK- 115
PD+ S V D + + K D C ++P + + LI + + K
Sbjct: 111 PDVVTYTSVV------DGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKV 164
Query: 116 -SALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAK 173
AL +++ + ++ Y ++D K +++ +L M V + T +
Sbjct: 165 DEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSS 224
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSC 232
++ AG + A+ F + + G N T L+ LC KV+ AR + E+ +C
Sbjct: 225 LLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATC 284
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
PP+ ++N + G+C++ R++EA+ +EM C P I+Y+ +++ +C +
Sbjct: 285 CPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEAR 344
Query: 293 ELLDEMQ-AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYT 351
LL+ M+ A G P+VVTY+ V++ +++ F EA ++M P++ ++ LI
Sbjct: 345 FLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDG 404
Query: 352 LGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCK 411
L +A RV A+ V + M V P TFN++I G ++A+ +L M +
Sbjct: 405 LCKAGRVDHAMEVLK-NMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAA-HGLE 462
Query: 412 PNVQTFHPLLKSCFKTGKTDEC--LSQLLDDMVNKHHLSLDIT---TYTLVIHGLCRANK 466
P + T+ LL+ +TG+ + L +++ K + ++ ++ +I GLC+A +
Sbjct: 463 PGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKARE 522
Query: 467 CEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+ A + +E+ + P + C I+D + + + A K+
Sbjct: 523 IDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKL 564
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 175/401 (43%), Gaps = 22/401 (5%)
Query: 25 FHSSSENCSHIVSSSPIESYCSDGARLDHHQVLCVDSPR--LPDIDVIISKVHVGSSEDE 82
SSS + ++ I+ +C G ++L V R +P++ S +H +
Sbjct: 175 LTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGD 234
Query: 83 VFQSLK--QDHVCNAIQPSHYLVNKLIHRF----KDDWKSALGIFRWAGSCPGYEHSSEI 136
+ Q+L + P+ LIH K D L A CP S
Sbjct: 235 LDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVS--- 291
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++D ++ ++++ + L +EM+ K + T ++R F A + E+A + +
Sbjct: 292 YNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMK 351
Query: 196 TF-GLEKNTETMNLLLDTLCKEGK-VELARSVFLELKSCIPPNAHTFNIFIHGWCKINRV 253
T G++ + T ++++ + + VE A + + + PNA T++ I G CK RV
Sbjct: 352 TAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRV 411
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
D A ++ M P V +++++I + CR + + ++LL M A G P +VTYTT+
Sbjct: 412 DHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTL 471
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPD-------SRFFNCLIYTLGRASRVQEAVYVYQ 366
+ +++G E A + E M+ K + F+ LI L +A + +A+ V +
Sbjct: 472 LEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVE 531
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKL 407
E+ P ++ G E+A ++ ++K+
Sbjct: 532 -ELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKV 571
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 4/212 (1%)
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
C P VVT+T ++ K+ ++A+ EKM+ + P+ R +N ++ L +A +A
Sbjct: 3 CQPTVVTWTIIIDGFCKANQLKQALACFEKMREFVA-PNERTYNVVVNGLCKARLTSKAY 61
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLK 422
V + VAPD T++T+I F G ++A +L EM + P+V T+ ++
Sbjct: 62 EVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVD 121
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI-GHD 481
+ GK D +++ +M K + D T++ +I G C A K + A L+KE++
Sbjct: 122 GLCRDGKMDRA-CEMVREMKLK-GVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSS 179
Query: 482 ITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
P T ++D + + A K+ VM+
Sbjct: 180 WKPDVVTYTALIDGFCKSGNLEKAMKMLGVME 211
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 101/246 (41%), Gaps = 45/246 (18%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM--SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
Y +V ++++ R LLE M + G + T + V+ +S A ++ +A E+
Sbjct: 327 YTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEM 386
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRV 253
+ N T + L+D LCK G+V+ A V + + P+ TFN I C++ +
Sbjct: 387 IARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDM 446
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYEL------------------- 294
DEA + M HG P +++Y+T+++ + R YEL
Sbjct: 447 DEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVP 506
Query: 295 -----------------------LDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
++E++++ C P ++ L ++G EEA ++
Sbjct: 507 EQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLIN 566
Query: 332 KMKIVG 337
+ VG
Sbjct: 567 SISKVG 572
>gi|125524449|gb|EAY72563.1| hypothetical protein OsI_00429 [Oryza sativa Indica Group]
Length = 535
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/419 (26%), Positives = 209/419 (49%), Gaps = 15/419 (3%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM- 160
+V K++ + + +WK AL F+WA P Y H S Y M+DILG+++++ MR L +E+
Sbjct: 114 VVLKVLQKQRSNWKVALSFFKWAAGLPQYNHGSRAYTEMLDILGRMKKVRLMRQLFDEIP 173
Query: 161 --SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
S+ ++T A ++ R++GA + ++A+ F + +G E + +LL +LC+
Sbjct: 174 MESRQSVITNRMFAVLLNRYAGAHKVQEAIDMFYKRKDYGFELDLVGFQILLMSLCRYKH 233
Query: 219 VELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTI 278
VE A ++FL+ K PP ++NI ++GWC + +A+ E+ P + +Y T
Sbjct: 234 VEEAEALFLQKKDEFPPVIKSWNIILNGWCVKGSLADAKRVWNEIIASKLKPDLFTYGTF 293
Query: 279 IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
I S + S +L M +G P+V ++ L EA+ I +M G
Sbjct: 294 INSLTKSGKLSTAVKLFTSMWEKGINPDVAICNCIIDQLCFKKRIPEALEIFGEMNDRGC 353
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
+ D +N LI + +R+ E VY +M GV+P+ T++ ++ EK
Sbjct: 354 QADVATYNTLIKHFCKINRM-EKVYELLDDMEVKGVSPNNMTYSYILKT------TEKPK 406
Query: 399 HVLEEMNKLEH--CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTL 456
V+ M ++E C+ + T++ L+ + + + ++ + QL+ D + ++ D ++T+
Sbjct: 407 DVISLMQRMEKSGCRLDSDTYN-LILNLYVSWDYEKGV-QLVWDEMERNGSGPDQRSFTI 464
Query: 457 VIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
++HGL K + A ++ M +TP +T +L++ ++ K A E+ K L
Sbjct: 465 MVHGLHSHGKLDEALHYYRTMESRGMTPEPRT-KLLVKAIRMKKDEPATEEQPLTRKNL 522
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 161/291 (55%), Gaps = 7/291 (2%)
Query: 200 EKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQW 258
EKN T +++D LCK ++ A + F ++K PN T+N+ I+G+CK+++V A
Sbjct: 4 EKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYL 63
Query: 259 TIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLA 318
++EMK G P V++YST+I +CRQ Y+L +M GC PN+VTY T++S L
Sbjct: 64 LLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLC 123
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG-VAPD 377
++G +EA + ++M+ G +PD ++ L+ L + ++ A+ V+ E NG PD
Sbjct: 124 RNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVF--EDNSNGDCPPD 181
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
++T+I G ++A + E+M + C+P+V TF L+ K + E Q+
Sbjct: 182 VVAYSTLIAGLCKTGRLDEACKLFEKMRE-NSCEPDVVTFTALMDGLCKGDRLQEA-QQV 239
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
L+ M ++ + + ++ TY+ +I GLC+ + A +FK MI I P T
Sbjct: 240 LETMEDR-NCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVT 289
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 183/363 (50%), Gaps = 14/363 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGH----IVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y+ ++ L K ++D + E+ S G +V +T+ + G+ ++A + F+
Sbjct: 150 YDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTL---IAGLCKTGRLDEACKLFE 206
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKI 250
++ E + T L+D LCK +++ A+ V +E ++C P N T++ I G CK
Sbjct: 207 KMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTP-NVITYSSLIDGLCKT 265
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
+V +AQ + M G P V++Y+++I +C L++EM A GC P+++TY
Sbjct: 266 GQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITY 325
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
T++ L K+G EA R+ MK PD ++CLI + R+ A ++ +M
Sbjct: 326 NTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFD-DML 384
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKT 430
+ V PD TF+T++ + + G + A +LEEM C P+V T+ L+ K G+
Sbjct: 385 KQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVA-SDCSPDVYTYTSLVDGFCKVGRM 443
Query: 431 DECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCR 490
E ++L M K ++ TYT +I CRA K AY L +EM+G+ + P T R
Sbjct: 444 VEA-RRVLKRMA-KRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYR 501
Query: 491 LIL 493
++
Sbjct: 502 SLI 504
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 187/363 (51%), Gaps = 9/363 (2%)
Query: 154 RALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTL 213
R ++E ++VT NT+ + R G ++A DE+ GL+ + + + L+ L
Sbjct: 101 RQMVENGCMPNLVTYNTLLSGLCR---NGLMDEAYELLDEMRERGLQPDKFSYDTLMAGL 157
Query: 214 CKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCV 272
CK GK+++A VF + + PP+ ++ I G CK R+DEA ++M+ + C P V
Sbjct: 158 CKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDV 217
Query: 273 ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEK 332
++++ ++ C+ + ++L+ M+ + C PNV+TY++++ L K+G +A + ++
Sbjct: 218 VTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKR 277
Query: 333 MKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
M + G +P+ +N LI+ + V A+ + + EM G PD T+NT+I G
Sbjct: 278 MIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLME-EMTATGCLPDIITYNTLIDGLCKTG 336
Query: 393 HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
+A + +M K + C P+V T+ L+ K + D + L DDM+ + L D+
Sbjct: 337 RAPEANRLFGDM-KAKFCNPDVITYSCLIGGFCKLERIDMART-LFDDMLKQAVLP-DVV 393
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEAV 511
T++ ++ G C A + A L +EM+ D +P T ++D K M +A ++ +
Sbjct: 394 TFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRM 453
Query: 512 MKK 514
K+
Sbjct: 454 AKR 456
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 168/334 (50%), Gaps = 5/334 (1%)
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHT 239
A + +A F ++ G N T N+L++ CK KV A + E+K S + PN T
Sbjct: 20 ANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVT 79
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
++ IHG+C+ +VD A ++M +GC P +++Y+T++ CR + YELLDEM+
Sbjct: 80 YSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMR 139
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
+G P+ +Y T+M+ L K+G + A+++ E PD ++ LI L + R+
Sbjct: 140 ERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLD 199
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
EA +++ +M EN PD TF ++ ++A VLE M +C PNV T+
Sbjct: 200 EACKLFE-KMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMED-RNCTPNVITYSS 257
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
L+ KTG+ + ++ M+ + + ++ TY +IHG C N + A LL +EM
Sbjct: 258 LIDGLCKTGQVRDA-QEVFKRMIVRG-IEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTA 315
Query: 480 HDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
P T ++D + + A ++ MK
Sbjct: 316 TGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMK 349
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 188/374 (50%), Gaps = 6/374 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++++ KV ++ + LL+EM + G + T + V+ F + + A + F ++
Sbjct: 45 YNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMV 104
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVD 254
G N T N LL LC+ G ++ A + E++ + P+ +++ + G CK ++D
Sbjct: 105 ENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKID 164
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
A ++ C P V++YST+I C+ + +L ++M+ C P+VVT+T +M
Sbjct: 165 MALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALM 224
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
L K +EA ++ E M+ P+ ++ LI L + +V++A V++ M G+
Sbjct: 225 DGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFK-RMIVRGI 283
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
P+ T+N++I F + A ++EEM C P++ T++ L+ KTG+ E
Sbjct: 284 EPNVVTYNSLIHGFCMTNGVDSALLLMEEMTA-TGCLPDIITYNTLIDGLCKTGRAPEA- 341
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
++L DM K + D+ TY+ +I G C+ + + A LF +M+ + P T +++
Sbjct: 342 NRLFGDMKAKF-CNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVE 400
Query: 495 EVKQKHMYDAAEKI 508
+ D AE++
Sbjct: 401 GYCNAGLVDDAERL 414
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 172/377 (45%), Gaps = 8/377 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
+ ++D L K ++ + + +LE M + + T + ++ GQ DA F +
Sbjct: 220 FTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMI 279
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS--CIPPNAHTFNIFIHGWCKINRV 253
G+E N T N L+ C V+ A + E+ + C+P + T+N I G CK R
Sbjct: 280 VRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLP-DIITYNTLIDGLCKTGRA 338
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
EA +MK C+P VI+YS +I +C+ L D+M Q P+VVT++T+
Sbjct: 339 PEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTL 398
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
+ +G ++A R+ E+M PD + L+ + R+ EA V + M + G
Sbjct: 399 VEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLK-RMAKRG 457
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
P+ T+ +I F G A+ +LEEM +PNV T+ L+ TG +E
Sbjct: 458 CQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVG-NGVQPNVITYRSLIGGFCGTGDLEEA 516
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT-CRLI 492
++L+ + + D+ Y +++ GLCR + A L + + PR+ LI
Sbjct: 517 -RKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALI 575
Query: 493 LDEVKQKHMYDAAEKIE 509
+ K + A E +E
Sbjct: 576 RGLCQGKELGKAMEVLE 592
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 174/367 (47%), Gaps = 12/367 (3%)
Query: 82 EVFQSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEM 139
EVF+ + + I+P+ N LIH F + SAL + + G Y
Sbjct: 273 EVFKRM----IVRGIEPNVVTYNSLIHGFCMTNGVDSAL-LLMEEMTATGCLPDIITYNT 327
Query: 140 MVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
++D L K + + L +M +K + T + ++ F + + A FD++
Sbjct: 328 LIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQA 387
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQ 257
+ + T + L++ C G V+ A + E+ S P+ +T+ + G+CK+ R+ EA+
Sbjct: 388 VLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEAR 447
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
++ M GC P V++Y+ +I ++CR + Y+LL+EM G PNV+TY +++
Sbjct: 448 RVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGF 507
Query: 318 AKSGDFEEAIRITEKM-KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
+GD EEA ++ E++ + K D + ++ L R R+ A+ + + + ++G P
Sbjct: 508 CGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEA-IKQSGTPP 566
Query: 377 DTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQ 436
+ +I KA VLEEM +PN + + +++ + G+ +E +
Sbjct: 567 RHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEA-NA 625
Query: 437 LLDDMVN 443
L D+++
Sbjct: 626 LADELLG 632
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 120/246 (48%), Gaps = 4/246 (1%)
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
C VI+++ +I C+ + +M+ +G PN TY +++ K A
Sbjct: 3 CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 62
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITM 387
+ ++MK G P+ ++ +I+ R ++V A +++ +M ENG P+ T+NT+++
Sbjct: 63 LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFR-QMVENGCMPNLVTYNTLLSG 121
Query: 388 FSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHL 447
+G ++A+ +L+EM + +P+ ++ L+ KTGK D L D+ +
Sbjct: 122 LCRNGLMDEAYELLDEMRE-RGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDN--SNGDC 178
Query: 448 SLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEK 507
D+ Y+ +I GLC+ + + A LF++M + P T ++D + + A++
Sbjct: 179 PPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQ 238
Query: 508 IEAVMK 513
+ M+
Sbjct: 239 VLETME 244
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 70/167 (41%), Gaps = 39/167 (23%)
Query: 348 LIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKL 407
+I L +A+R+ EA Y +M + G P+ T+N +I F +A+ +L+EM +
Sbjct: 13 MIDGLCKANRLPEAT-TYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKE- 70
Query: 408 EHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKC 467
L+ ++ TY+ VIHG CR K
Sbjct: 71 -------------------------------------SGLAPNVVTYSTVIHGFCRQTKV 93
Query: 468 EWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
+ AY LF++M+ + P T +L + + + D A ++ M++
Sbjct: 94 DTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRE 140
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 126/446 (28%), Positives = 201/446 (45%), Gaps = 49/446 (10%)
Query: 88 KQDHVCNAIQPSHYLVNKLIHRFKDDW--KSALGIFRWAGSCPGYEHSSEIYEMMVDILG 145
K V NA Y N LIH AL ++R S G + S + Y ++ LG
Sbjct: 185 KAGFVLNA-----YSYNGLIHLLIQSGFCGEALEVYRRMVS-EGLKPSLKTYSALMVALG 238
Query: 146 KVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTE 204
K R + + LL+EM G + T +R AG+ ++A F + G +
Sbjct: 239 KKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLV 298
Query: 205 TMNLLLDTLCKEGKVELARSVFLELKS--------------------------------- 231
T +L+D LC G++E A+ +F+++K+
Sbjct: 299 TYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQM 358
Query: 232 ---CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
P+ TF I + CK DEA T M+ G P + +Y+T+I R
Sbjct: 359 EADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRI 418
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
+LLD M++ G P TY T + Y KSG+ +A+ EKMK G P+ N
Sbjct: 419 EDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNAS 478
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
+Y+L R++EA ++ + ENG+APD+ T+N M+ +S G ++A ++L EM +
Sbjct: 479 LYSLAEMGRLREAKTMFN-GLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIR-N 536
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
C+P+V + L+ S +K G+ DE Q+ D M LS + TY ++ GL + + +
Sbjct: 537 GCEPDVIVVNSLIDSLYKAGRVDEAW-QMFDRM-KDMKLSPTVVTYNTLLSGLGKEGRVQ 594
Query: 469 WAYLLFKEMIGHDITPRYQTCRLILD 494
A LF+ MI +P + +LD
Sbjct: 595 KAIELFESMIXKKCSPNTISFNTLLD 620
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 185/382 (48%), Gaps = 22/382 (5%)
Query: 61 SPRLPDIDVIISKV-HVGSSED--EVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSA 117
P L V+I + + G E+ E+F +K N +P + L+ +F D
Sbjct: 294 GPDLVTYTVLIDALCNAGQLENAKELFVKMK----ANGHKPDQVIYITLLDKFND--FGD 347
Query: 118 LGIFR--WAG-SCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIV----TLNT 170
L F+ W+ GY + ++VD+L K R D+ A + M K I+ T NT
Sbjct: 348 LDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNT 407
Query: 171 IAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK 230
+ + R AG+ EDA++ D + + G++ T +D K G+ A F ++K
Sbjct: 408 LICGLLR---AGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMK 464
Query: 231 S-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFS 289
+ I PN N ++ ++ R+ EA+ ++ +G P ++Y+ +++ Y +
Sbjct: 465 AKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVD 524
Query: 290 KVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
+ LL EM GC P+V+ +++ L K+G +EA ++ ++MK + P +N L+
Sbjct: 525 EAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLL 584
Query: 350 YTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH 409
LG+ RVQ+A+ +++ M +P+T +FNT++ F + E A + +M ++
Sbjct: 585 SGLGKEGRVQKAIELFE-SMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMD- 642
Query: 410 CKPNVQTFHPLLKSCFKTGKTD 431
CKP+V T++ ++ K K +
Sbjct: 643 CKPDVLTYNTVIYGLIKENKVN 664
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 141/290 (48%), Gaps = 12/290 (4%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM----SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
+ M++ + GK ++ ++ L +EM K +T N V+ + + + A+ F
Sbjct: 826 FNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNI---VISSLAKSNNLDKALDFFY 882
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK--SCIPPNAHTFNIFIHGWCKI 250
+L + T L+D L K G++E A +F E+ C PN FNI I+G+ KI
Sbjct: 883 DLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGC-KPNCAIFNILINGYGKI 941
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
+ A + M G P + SY+ ++ C + +E+++ G P+ + Y
Sbjct: 942 GDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAY 1001
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
+++ L KS EEA+ + +M+ G PD +N L+ LG A V++A +Y+ E+
Sbjct: 1002 NRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYE-ELQ 1060
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
G+ PD T+N +I +S + E A+ V + M ++ C PN+ T+ L
Sbjct: 1061 LAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNM-MVDGCNPNIGTYAQL 1109
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 158/329 (48%), Gaps = 6/329 (1%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHT 239
+ + A+ +EL G+ + + L+ LCK + A +F + K I P +
Sbjct: 731 AEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLAS 790
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+N I +++ ++A ++MK GC P +++ ++ + + ++++EL EM
Sbjct: 791 YNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMI 850
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
++ C P+ +TY V+S LAKS + ++A+ + +P R + LI L + R++
Sbjct: 851 SRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLE 910
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
EA+ +++ EM + G P+ + FN +I + G E A + + M E +P+++++
Sbjct: 911 EAMRLFE-EMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVN-EGIRPDLKSYTI 968
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
L+ G+ DE L + + L D Y +I+GL ++ + E A L+ EM
Sbjct: 969 LVDCLCLAGRVDEALYYF--NELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRN 1026
Query: 480 HDITPRYQTCRLILDEVKQKHMYDAAEKI 508
I P T ++ + M + A+++
Sbjct: 1027 RGIVPDLYTYNSLMLNLGLAGMVEQAKRM 1055
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/412 (23%), Positives = 180/412 (43%), Gaps = 44/412 (10%)
Query: 141 VDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGL 199
+ I G +RQM +L +M K G ++ + ++ +G +A+ + + + GL
Sbjct: 167 LSIRGGLRQM---TTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGL 223
Query: 200 EKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQW 258
+ + +T + L+ L K+ E+ + E++ + PN +TF I I + ++DEA
Sbjct: 224 KPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYE 283
Query: 259 TIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL----------------------- 295
+ M GC P +++Y+ +I + C EL
Sbjct: 284 IFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFN 343
Query: 296 ------------DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSR 343
+M+A G P+VVT+T ++ L K+ DF+EA + M+ G P+
Sbjct: 344 DFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLH 403
Query: 344 FFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEE 403
+N LI L RA R+++A+ + M GV P T+ T I F G KA E+
Sbjct: 404 TYNTLICGLLRAGRIEDALKLLDT-MESVGVQPTAYTYITFIDYFGKSGETGKAVETFEK 462
Query: 404 MNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCR 463
M K + PN+ + L S + G+ E ++ + + + ++ L+ D TY +++ +
Sbjct: 463 M-KAKGIVPNIVACNASLYSLAEMGRLRE--AKTMFNGLRENGLAPDSVTYNMMMKCYSK 519
Query: 464 ANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
+ + A L EMI + P ++D + + D A ++ MK +
Sbjct: 520 VGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDM 571
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 139/300 (46%), Gaps = 6/300 (2%)
Query: 187 AVRTFDELGT-FGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFI 244
A + FD+ G+ + N L+ L + E A +F ++K+ P+A TFN+ +
Sbjct: 771 AYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLL 830
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
K ++ E +EM C P I+Y+ +I S + N K + ++ +
Sbjct: 831 AVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFR 890
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
P TY ++ LAK G EEA+R+ E+M G KP+ FN LI G+ + A +
Sbjct: 891 PTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQL 950
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
++ M G+ PD ++ ++ G ++A + E+ K P+ ++ ++
Sbjct: 951 FK-RMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNEL-KSTGLDPDFIAYNRIINGL 1008
Query: 425 FKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
K+ + +E L+ L ++M N+ + D+ TY ++ L A E A +++E+ + P
Sbjct: 1009 GKSQRMEEALA-LYNEMRNRGIVP-DLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEP 1066
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/401 (20%), Positives = 162/401 (40%), Gaps = 38/401 (9%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G + ++ Y +D GK + + E+M +KG + + + + G+ +A
Sbjct: 432 GVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREA 491
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHG 246
F+ L GL ++ T N+++ K G+V+ A ++ E+ ++ P+ N I
Sbjct: 492 KTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDS 551
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
K RVDEA MK P V++Y+T++ ++ K EL + M + C PN
Sbjct: 552 LYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPN 611
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
+++ T++ K+ + E A+++ KM ++ KPD +N +IY L + ++V A + +
Sbjct: 612 TISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFH 671
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
+ + PD T T++ G A + + + N + L+
Sbjct: 672 --QLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLV 729
Query: 427 TGKTDECL----------------------------------SQLLDDMVNKHHLSLDIT 452
+ D+ + Q+ D K +S +
Sbjct: 730 EAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLA 789
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
+Y +I L + E A+ LFK+M P T ++L
Sbjct: 790 SYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLL 830
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 135/328 (41%), Gaps = 40/328 (12%)
Query: 203 TETMNLLLDTLCKEGKVELARSVFLEL--------------------------------- 229
TET N +L+ L KVE +VF +
Sbjct: 122 TETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLN 181
Query: 230 ---KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQY 286
K+ NA+++N IH + EA + M G P + +YS ++ + ++
Sbjct: 182 KMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKR 241
Query: 287 NFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFN 346
+ V LL EM+ G PNV T+T + L ++G +EA I +M G PD +
Sbjct: 242 DSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYT 301
Query: 347 CLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNK 406
LI L A +++ A ++ V+M NG PD + T++ F+ G + +M +
Sbjct: 302 VLIDALCNAGQLENAKELF-VKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQM-E 359
Query: 407 LEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANK 466
+ P+V TF L+ K DE + D++ K + ++ TY +I GL RA +
Sbjct: 360 ADGYMPDVVTFTILVDVLCKARDFDEAFATF--DVMRKQGILPNLHTYNTLICGLLRAGR 417
Query: 467 CEWAYLLFKEMIGHDITPRYQTCRLILD 494
E A L M + P T +D
Sbjct: 418 IEDALKLLDTMESVGVQPTAYTYITFID 445
>gi|15219049|ref|NP_175673.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207559|sp|Q9SSR6.1|PPR78_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g52640, mitochondrial; Flags: Precursor
gi|5903042|gb|AAD55601.1|AC008016_11 Contains 2 PF|01535 DUF domains [Arabidopsis thaliana]
gi|45773940|gb|AAS76774.1| At1g52640 [Arabidopsis thaliana]
gi|62320530|dbj|BAD95108.1| hypothetical protein [Arabidopsis thaliana]
gi|332194712|gb|AEE32833.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 120/460 (26%), Positives = 219/460 (47%), Gaps = 16/460 (3%)
Query: 62 PRLPDIDVIISKV---HVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSAL 118
P PD+ IS+V H +D L+ V + + S LV +++ R K+ A
Sbjct: 32 PPSPDLVNEISRVLSDHRNPKDD-----LEHTLVAYSPRVSSNLVEQVLKRCKNLGFPAH 86
Query: 119 GIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNT--IAKVMR 176
F WA P + HS E Y ++V+ILG +Q + L E + + +++ V R
Sbjct: 87 RFFLWARRIPDFAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFR 146
Query: 177 RFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPP 235
+S A +A R F+ + FG++ + ++ LL +LC + V A+ F + K I P
Sbjct: 147 AYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVP 206
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
+A T++I + GW +I A+ EM C +++Y+ ++ + C+ + Y++
Sbjct: 207 SAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMF 266
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
EM G P+ ++ + +GD A ++ ++MK P+ FN +I TL +
Sbjct: 267 QEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKN 326
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQ 415
+V +A Y+ EM + G PDT T+N+++ H +A +L M++ + C P+
Sbjct: 327 EKVDDA-YLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTK-CLPDRH 384
Query: 416 TFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCR-ANKCEWAYLLF 474
T++ +LK + G+ D +++ + M + + TYT++IHGL R K E A F
Sbjct: 385 TYNMVLKLLIRIGRFDRA-TEIWEGMSERKFYPT-VATYTVMIHGLVRKKGKLEEACRYF 442
Query: 475 KEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
+ MI I P T ++ + + D + + M++
Sbjct: 443 EMMIDEGIPPYSTTVEMLRNRLVGWGQMDVVDVLAGKMER 482
>gi|326504802|dbj|BAK06692.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 522
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 186/408 (45%), Gaps = 21/408 (5%)
Query: 94 NAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEH--SSEIYEMMVDILGKVRQMD 151
+ S L+ +++ R + K AL + P +++ Y+ +VD LG+ Q D
Sbjct: 72 GGVSLSQGLLVQILLRLRGASKLALSLLNAVRLHPSVSSPPNADAYDAVVDALGRAHQFD 131
Query: 152 QMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTF-GLEKNTETMNLLL 210
L+ E + T T A + RR+ AG AVR FD++ F G E + + LL
Sbjct: 132 AAWRLVVEAAADGAATPRTFAVLARRYVAAGLTRQAVRAFDDMEAFLGREPDAQEFTTLL 191
Query: 211 DTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHP 270
DTLCK ++A VF + K PN + I I+GWCK+NR D AQ +++M HG P
Sbjct: 192 DTLCKYKYPKVAVEVFNKRKYKYEPNEKMYTILIYGWCKVNRSDMAQKFLKDMIDHGIEP 251
Query: 271 CVISYSTIIQSYCRQYNF----------SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKS 320
+++Y+ ++ CR + + LL EM +G P+V +Y+ ++ +++
Sbjct: 252 NIVTYNILLNGICRHASLHPDNRFDRTVNAAENLLKEMNDRGIEPDVTSYSIILHVYSRA 311
Query: 321 GDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTST 380
E + + MK G P + +I L R+++A + EM GV P +T
Sbjct: 312 HKAELCLCMFRSMKDRGICPTVATYTSVIKCLASCGRLEDAESLLG-EMVSEGVCPSPAT 370
Query: 381 FNTMITMFSHHGHHEKAFHVLEEMNKLEH-CKPNVQTFHP--LLKSCFKTGKTDECLSQL 437
+N F + + LE NK++ C P H +L F E + +L
Sbjct: 371 YN---CFFKEYRGRKDVSGALELYNKMKAPCSPTAPDIHSYNILLGMFIKLDRHETVMEL 427
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
+DM + + D+ +YTL++HG C K A F EMI P+
Sbjct: 428 WNDMCER-AVGPDLDSYTLLVHGFCAKEKWREACQFFMEMIEKGFLPQ 474
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 125/306 (40%), Gaps = 17/306 (5%)
Query: 219 VELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTI 278
+ L +V L PPNA ++ + + ++ D A + E G +++ +
Sbjct: 96 LSLLNAVRLHPSVSSPPNADAYDAVVDALGRAHQFDAAWRLVVEAAADGAA-TPRTFAVL 154
Query: 279 IQSYCRQYNFSKVYELLDEMQA-QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+ Y + D+M+A G P+ +TT++ L K + A+ + K K
Sbjct: 155 ARRYVAAGLTRQAVRAFDDMEAFLGREPDAQEFTTLLDTLCKYKYPKVAVEVFNKRK-YK 213
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG--HHE 395
+P+ + + LIY + +R A + +M ++G+ P+ T+N ++ H H +
Sbjct: 214 YEPNEKMYTILIYGWCKVNRSDMAQKFLK-DMIDHGIEPNIVTYNILLNGICRHASLHPD 272
Query: 396 KAF--------HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHL 447
F ++L+EMN +P+V ++ +L + K + CL + +
Sbjct: 273 NRFDRTVNAAENLLKEMND-RGIEPDVTSYSIILHVYSRAHKAELCLCMFRS--MKDRGI 329
Query: 448 SLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEK 507
+ TYT VI L + E A L EM+ + P T E + + A +
Sbjct: 330 CPTVATYTSVIKCLASCGRLEDAESLLGEMVSEGVCPSPATYNCFFKEYRGRKDVSGALE 389
Query: 508 IEAVMK 513
+ MK
Sbjct: 390 LYNKMK 395
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 82/188 (43%), Gaps = 4/188 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G E Y +++ + + + + + M +G T+ T V++ + G+ EDA
Sbjct: 293 GIEPDVTSYSIILHVYSRAHKAELCLCMFRSMKDRGICPTVATYTSVIKCLASCGRLEDA 352
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIP--PNAHTFNIFI 244
E+ + G+ + T N V A ++ ++K+ C P P+ H++NI +
Sbjct: 353 ESLLGEMVSEGVCPSPATYNCFFKEYRGRKDVSGALELYNKMKAPCSPTAPDIHSYNILL 412
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
+ K++R + +M P + SY+ ++ +C + + + + EM +G
Sbjct: 413 GMFIKLDRHETVMELWNDMCERAVGPDLDSYTLLVHGFCAKEKWREACQFFMEMIEKGFL 472
Query: 305 PNVVTYTT 312
P +T+ T
Sbjct: 473 PQKITFET 480
>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
Length = 683
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 189/387 (48%), Gaps = 39/387 (10%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
+Y+ ++ L + + LL+EM G +NT ++ G G+ +A R D +
Sbjct: 214 LYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGLCGLGRVREAARLVDRM 273
Query: 195 GTFGLEKNTETMNLLLDTLCK-------------------------------EGKVELAR 223
T G + T LL LC+ EGK+ A
Sbjct: 274 MTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEVNVVMLNTVIRGCLTEGKLARAT 333
Query: 224 SVF--LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQS 281
++ + K C PP+ HT++I +HG CK+ R A + EM+ GC P +++YST++ S
Sbjct: 334 ELYEMMGSKGC-PPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHS 392
Query: 282 YCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPD 341
+CR + +LD+M A+G N Y ++ L K G ++A R+ ++MK G KPD
Sbjct: 393 FCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPD 452
Query: 342 SRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVL 401
+N +IY L ++EA ++++ + E GV + T+NT+I +G ++ +
Sbjct: 453 ICTYNTMIYHLCNNDLMEEAEHIFR-NLIEEGVVANGITYNTLIHALLRNGRWQEGLRLA 511
Query: 402 EEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGL 461
EM L C+ +V +++ L+K+ K G D ++ LL++MV K + + +Y ++I+ L
Sbjct: 512 SEM-LLHGCQLDVISYNGLIKALCKEGNVDRSMA-LLEEMVTK-GIKPNNFSYNMLINEL 568
Query: 462 CRANKCEWAYLLFKEMIGHDITPRYQT 488
C+A K A L KEM+ +TP T
Sbjct: 569 CKAGKVRDALELSKEMLNQGLTPDIVT 595
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 176/385 (45%), Gaps = 37/385 (9%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAK----------------------- 173
Y ++ L + RQ D+ A+L + + ++V LNT+ +
Sbjct: 285 YGFLLQGLCRTRQADEACAMLGRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGC 344
Query: 174 ---------VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARS 224
+M G++ AVR DE+ G N T + LL + C+ G + AR+
Sbjct: 345 PPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARA 404
Query: 225 VFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYC 283
+ + L N+ +N I+ CK ++D+A +QEMK GC P + +Y+T+I C
Sbjct: 405 MLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLC 464
Query: 284 RQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSR 343
+ + + +G N +TY T++ L ++G ++E +R+ +M + G + D
Sbjct: 465 NNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVI 524
Query: 344 FFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEE 403
+N LI L + V ++ + + EM G+ P+ ++N +I G A + +E
Sbjct: 525 SYNGLIKALCKEGNVDRSMALLE-EMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKE 583
Query: 404 MNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCR 463
M + P++ T++ L+ K G T L+ LL+ + N++ + DI TY ++I C+
Sbjct: 584 MLN-QGLTPDIVTYNTLINGLCKVGWTHAALN-LLEKLPNEN-VHPDIVTYNILISWHCK 640
Query: 464 ANKCEWAYLLFKEMIGHDITPRYQT 488
+ A +L + I I P +T
Sbjct: 641 VRLLDDAAMLLDKAISGGIVPNERT 665
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 144/346 (41%), Gaps = 40/346 (11%)
Query: 197 FGLEKNTETMNLLLDTL----CKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINR 252
F + + + N++L TL C + L R + L+ +PP TF + C++ R
Sbjct: 136 FAVSPSFRSYNVVLSTLARADCHADALLLYRRM---LRDRVPPTTFTFGVAARALCRLGR 192
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
+A ++ M HGC P + Y T+I + Q ++ LLDEM GC +V T+
Sbjct: 193 AGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFND 252
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA---------VY 363
++ L G EA R+ ++M G P + L+ L R + EA V
Sbjct: 253 LVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEVN 312
Query: 364 VYQVE---------------------MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLE 402
V + M G PD T++ ++ G A +L+
Sbjct: 313 VVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLD 372
Query: 403 EMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC 462
EM + + C PN+ T+ LL S + G D+ +LD M+ K S++ Y +I+ LC
Sbjct: 373 EMEE-KGCAPNIVTYSTLLHSFCRNGMWDDA-RAMLDQMLAK-GFSMNSQGYNGIIYALC 429
Query: 463 RANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+ K + A L +EM P T ++ + + + AE I
Sbjct: 430 KDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHI 475
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 103/202 (50%), Gaps = 4/202 (1%)
Query: 154 RALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTL 213
R L+EE + +T NT+ + R G+W++ +R E+ G + + + N L+ L
Sbjct: 477 RNLIEEGVVANGITYNTLIHALLR---NGRWQEGLRLASEMLLHGCQLDVISYNGLIKAL 533
Query: 214 CKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCV 272
CKEG V+ + ++ E+ + I PN ++N+ I+ CK +V +A +EM G P +
Sbjct: 534 CKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDI 593
Query: 273 ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEK 332
++Y+T+I C+ LL+++ + P++VTY ++S+ K ++A + +K
Sbjct: 594 VTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDK 653
Query: 333 MKIVGSKPDSRFFNCLIYTLGR 354
G P+ R + ++ R
Sbjct: 654 AISGGIVPNERTWGMMVQNFVR 675
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 117/268 (43%), Gaps = 15/268 (5%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQW 184
G+ +S+ Y ++ L K ++DQ L++EM K I T NT+ +
Sbjct: 413 GFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTM---IYHLCNNDLM 469
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK----VELARSVFLELKSCIPPNAHTF 240
E+A F L G+ N T N L+ L + G+ + LA + L C + ++
Sbjct: 470 EEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLH--GC-QLDVISY 526
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
N I CK VD + ++EM G P SY+ +I C+ EL EM
Sbjct: 527 NGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLN 586
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
QG P++VTY T+++ L K G A+ + EK+ PD +N LI + + +
Sbjct: 587 QGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDD 646
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMF 388
A + + G+ P+ T+ M+ F
Sbjct: 647 AAMLLDKAI-SGGIVPNERTWGMMVQNF 673
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 73/151 (48%), Gaps = 2/151 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLN-TIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ L K +D+ ALLEEM I N + ++ AG+ DA+ E+
Sbjct: 526 YNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEML 585
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVD 254
GL + T N L++ LCK G A ++ +L + + P+ T+NI I CK+ +D
Sbjct: 586 NQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLD 645
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQ 285
+A + + G P ++ ++Q++ RQ
Sbjct: 646 DAAMLLDKAISGGIVPNERTWGMMVQNFVRQ 676
>gi|297853022|ref|XP_002894392.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297340234|gb|EFH70651.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 525
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 114/431 (26%), Positives = 207/431 (48%), Gaps = 10/431 (2%)
Query: 90 DHVCNAIQP--SHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKV 147
+H A P S LV +++ R K+ A F WA P +EHS E Y ++V+ILG
Sbjct: 56 EHTLAAYSPRVSSNLVEQVLKRCKNLGFPAHRFFLWAKRIPDFEHSLESYHILVEILGCS 115
Query: 148 RQMDQMRALLEEMSKGHI--VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTET 205
+Q + L E + + +T V R +S A +A R F+ + FG++ +
Sbjct: 116 KQFALLWDFLIEAREYNYFEITSKVFWIVFRAYSRANLPSEASRAFNRMVEFGIKPCVDD 175
Query: 206 MNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
++ LL +LC V A+ F + K I P+A T++I + GW +I A+ EM
Sbjct: 176 LDQLLHSLCDRKHVNHAQEFFDKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEML 235
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
+ C +++Y+ ++ + C+ + Y++ EM G P+ ++ + + D
Sbjct: 236 ENNCVVDLLAYNALLDALCKSGDVDGAYKMFQEMGNLGLKPDAYSFAIFIHSYCDASDVH 295
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTM 384
A ++ ++MK P+ FN +I TL + +V +A Y+ EM + G PDT T+N++
Sbjct: 296 SAYQVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDA-YLLLDEMIQKGANPDTWTYNSI 354
Query: 385 ITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK 444
+ H +A +L M++ + C P+ T++ +LK + G+ D ++++ + M +
Sbjct: 355 MAYHCDHCEVNRATKLLSRMDRTK-CLPDRHTYNMVLKLLIRIGRFDR-VTEIWEGMSER 412
Query: 445 HHLSLDITTYTLVIHGLCR-ANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYD 503
+ TYT++IHGL R K E A F+ MI I P T ++ + + D
Sbjct: 413 KFYPT-VATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQMD 471
Query: 504 AAEKIEAVMKK 514
+ + M++
Sbjct: 472 VVDVLAGKMER 482
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 116/428 (27%), Positives = 198/428 (46%), Gaps = 40/428 (9%)
Query: 113 DWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIA 172
D ++++ IF+WAG+ GY HS +Y +++D LG + LL +M + IV ++
Sbjct: 83 DVETSMEIFKWAGAQKGYCHSFSVYYLLIDKLGAAAGFKVIDRLLLQMKEEGIVFRESLF 142
Query: 173 KVMRRFSG-AGQWEDAVRTF-DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK 230
++ ++ G AG A R D G + E + + N++LD L +A +VF ++
Sbjct: 143 ILIMKYYGRAGLPGQATRLLLDMKGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDML 202
Query: 231 S-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFS 289
S + PN +TF + + C +N VD A +++M HGC P + Y T+I + ++
Sbjct: 203 SKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVD 262
Query: 290 KVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
+ +LL+EM GCPP+V T+ TV+ + E ++ ++M + G P+ + L+
Sbjct: 263 EALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLM 322
Query: 350 YTLGRASRVQEA--------------------------------VYVYQVEMPENGVAPD 377
+ L + R+ EA +VY +M NG PD
Sbjct: 323 HGLCKTCRIDEAQALLSKVPGPNVVHFNTLVNGFVRNGRLNEATAFVYD-KMINNGYVPD 381
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
TF+T++ G A ++ +M+ + CKPN+ T+ L+ K G+ +E +
Sbjct: 382 VFTFSTLVNGLCKKGLFGSALELVNDMDA-KGCKPNLNTYTILIDGFCKKGQLEEA-GLI 439
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCR-LILDEV 496
L +M+ K SL+ Y +I LC+ K A +F EM P T LI
Sbjct: 440 LREMLTK-GFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLC 498
Query: 497 KQKHMYDA 504
+ M DA
Sbjct: 499 RVDEMEDA 506
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 133/532 (25%), Positives = 233/532 (43%), Gaps = 90/532 (16%)
Query: 51 LDHHQVLCVDSPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRF 110
LD V C + P +V++ + VG+ V ++ D + + P+ Y ++
Sbjct: 163 LDMKGVYCCE-PSFRSYNVVLDVLVVGNCP-SVASNVFYDMLSKGVSPNDYTFGLVMKAL 220
Query: 111 --KDDWKSALGIFRWA---GSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGH 164
++ +A + R G P +S IY+ ++D L K ++D+ LLEEM G
Sbjct: 221 CMVNEVDNACLLLRDMTKHGCVP----NSMIYQTLIDALSKRDRVDEALKLLEEMFLMGC 276
Query: 165 IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARS 224
+NT V+ F + + + D + G N T L+ LCK +++ A++
Sbjct: 277 PPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQA 336
Query: 225 VFLELKSCIP-PNAHTFNIFIHGWCKINRVDEA-QWTIQEMKGHGCHPCVISYSTIIQSY 282
L S +P PN FN ++G+ + R++EA + +M +G P V ++ST++
Sbjct: 337 ----LLSKVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGL 392
Query: 283 CRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM--------- 333
C++ F EL+++M A+GC PN+ TYT ++ K G EEA I +M
Sbjct: 393 CKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNT 452
Query: 334 --------------KI------------VGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
KI G KPD FN LI+ L R +++A+ +Y+
Sbjct: 453 VGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYR- 511
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKT 427
+M GV ++ TFNT+I F G ++A ++ +M C + T++ L+K+ KT
Sbjct: 512 DMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDM-LFRGCPLDEITYNGLIKALCKT 570
Query: 428 GKTDECLSQLLDDMVNK----------------------------------HHLSLDITT 453
G ++ L L ++M+ K S DI T
Sbjct: 571 GAVEKGLG-LFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVT 629
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
Y +I+GLC+ + + A LF+++ I P T ++ + ++ +D A
Sbjct: 630 YNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDA 681
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 144/311 (46%), Gaps = 40/311 (12%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
GY + +V+ L K L+ +M +KG LNT ++ F GQ E+A
Sbjct: 377 GYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEA 436
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIH 245
E+ T G NT N L+ LCK GK+ A +F E+ K C P+ TFN I
Sbjct: 437 GLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGC-KPDIFTFNSLIF 495
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G C+++ +++A ++M G ++++T+I ++ R+ + +L+++M +GCP
Sbjct: 496 GLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPL 555
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKM-------KIV---------------------- 336
+ +TY ++ L K+G E+ + + E+M I+
Sbjct: 556 DEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFM 615
Query: 337 ------GSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSH 390
G PD +N LI L + R+QEA+ +++ ++ G+ PD+ T+NT+I
Sbjct: 616 RDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFE-KLQAEGIQPDSITYNTLICWLCR 674
Query: 391 HGHHEKAFHVL 401
G + A +L
Sbjct: 675 EGAFDDACFLL 685
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 131/273 (47%), Gaps = 11/273 (4%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQW 184
G+ ++ Y ++ L K ++ + + EMS K I T N++ + R +
Sbjct: 447 GFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVD---EM 503
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNI 242
EDA+ + ++ G+ N+ T N L+ + G+++ A + + + C P + T+N
Sbjct: 504 EDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGC-PLDEITYNG 562
Query: 243 FIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
I CK V++ +EM G P +I+ + +I +C E + +M +G
Sbjct: 563 LIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRG 622
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
P++VTY ++++ L K G +EA+ + EK++ G +PDS +N LI L R +A
Sbjct: 623 FSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDAC 682
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHE 395
++ + ENG P+ T+N ++ F + E
Sbjct: 683 FLLYRGV-ENGFVPNDVTWNILVYNFGKQSNSE 714
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 115/224 (51%), Gaps = 2/224 (0%)
Query: 144 LGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKN 202
L +V +M+ AL +M +G I T ++ F G+ ++A++ +++ G +
Sbjct: 497 LCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLD 556
Query: 203 TETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQ 261
T N L+ LCK G VE +F E+ + + P+ T NI I+G+C +V A ++
Sbjct: 557 EITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMR 616
Query: 262 EMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSG 321
+M G P +++Y+++I C++ + L +++QA+G P+ +TY T++ +L + G
Sbjct: 617 DMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREG 676
Query: 322 DFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
F++A + + G P+ +N L+Y G+ S + Y
Sbjct: 677 AFDDACFLLYRGVENGFVPNDVTWNILVYNFGKQSNSEGQTITY 720
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 118/449 (26%), Positives = 201/449 (44%), Gaps = 48/449 (10%)
Query: 101 YLVNKLIHRFKDDW--KSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLE 158
Y N LIH + AL ++R G + S + + ++ GK R + +++LLE
Sbjct: 195 YSYNGLIHLLLQSGLCREALEMYRRM-VLEGLKPSLKTFSALMVATGKRRDTETVKSLLE 253
Query: 159 EM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEG 217
EM S G + T +R AG+ ++A R + G + T +L+D LC G
Sbjct: 254 EMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAG 313
Query: 218 KVELARSVFLELKSC------------------------------------IPPNAHTFN 241
K++ A +F+++K+ P+ TF
Sbjct: 314 KLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFT 373
Query: 242 IFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ 301
I ++ CK +DEA + M+ G P + +Y+T+I R +L + M+
Sbjct: 374 ILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETL 433
Query: 302 GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
G P TY + + KSG ++A+ EKMKI G P+ N +Y+L R++EA
Sbjct: 434 GVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREA 493
Query: 362 VYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLL 421
++ + NG+APD+ T+N M+ +S G ++A +L +M++ C+P++ + L+
Sbjct: 494 KVIFN-RLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSE-NQCEPDIIVINSLI 551
Query: 422 KSCFKTGKTDECLSQL--LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
+ +K G+ DE L DM L+ + TY +I GL + + + A LF M G
Sbjct: 552 NTLYKAGRVDEAWKMFCRLKDM----KLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTG 607
Query: 480 HDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+ P T ILD + + D A K+
Sbjct: 608 NGCPPNTITFNTILDCLCKNDEVDLALKM 636
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 154/311 (49%), Gaps = 8/311 (2%)
Query: 201 KNTETMNLLLDTLCKEGKVELARSVFLELKS--CIPPNAHTFNIFIHGWCKINRVDEAQW 258
K+ + ++ LCK + +A+SVF+ + P ++N I G+ ++ DE W
Sbjct: 752 KDGSVLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHN-DEMAW 810
Query: 259 TI-QEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
+ EMK GC P V +Y+ ++ ++ + ++++EL ++M C PN +T+ +++ L
Sbjct: 811 NLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANL 870
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
KS ++A+ + + P + L+ L ++ R++EA +++ EM + G P+
Sbjct: 871 VKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFE-EMVDYGCRPN 929
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
+ +N +I F G A + + M + E +P+++++ L+ + G+ D+ L
Sbjct: 930 NAIYNILINGFGKTGDVNTACELFKRMVR-EGIRPDLKSYTSLVGCLCEAGRVDDALHYF 988
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVK 497
+ + + L LD Y L+I GL R+++ E A L+ EM I P T ++ +
Sbjct: 989 --EKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLG 1046
Query: 498 QKHMYDAAEKI 508
M + A K+
Sbjct: 1047 VAGMVEQAGKL 1057
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 170/352 (48%), Gaps = 7/352 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
GY + ++V+ L K +D+ LL+ M K G + L+T ++ + +DA
Sbjct: 364 GYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDA 423
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHG 246
+ F+ + T G+ T L +D K G+ + A F ++K I PN N ++
Sbjct: 424 LDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYS 483
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
++ R+ EA+ +K +G P ++Y+ +++ Y + + ELL +M C P+
Sbjct: 484 LAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPD 543
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
++ ++++ L K+G +EA ++ ++K + P +N LI LG+ +VQ A+ ++
Sbjct: 544 IIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELF- 602
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
M NG P+T TFNT++ + + A +L +M + +C P+V TF+ ++
Sbjct: 603 ASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTM-NCMPDVLTFNTIIHGLVI 661
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
+ + + L M K L+ D T ++ G+ + E A+ + ++ +
Sbjct: 662 EKRVSDAI-WLFHQM--KKMLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFV 710
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 133/252 (52%), Gaps = 3/252 (1%)
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHT 239
+G+ + ++++ + NT T N+++ L K ++ A +F +L S P T
Sbjct: 838 SGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCT 897
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+ + G K R++EA+ +EM +GC P Y+ +I + + + + EL M
Sbjct: 898 YGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMV 957
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
+G P++ +YT+++ L ++G ++A+ EK+K G DS +N +I LGR+ R++
Sbjct: 958 REGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIE 1017
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
EA+ +Y EM G+ PD T+N++I G E+A + EE+ + +PNV T++
Sbjct: 1018 EALTLYD-EMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEEL-QFIGLEPNVFTYNA 1075
Query: 420 LLKSCFKTGKTD 431
L++ +G +D
Sbjct: 1076 LIRGYSMSGNSD 1087
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 167/371 (45%), Gaps = 40/371 (10%)
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHT 239
+G +A+ + + GL+ + +T + L+ K E +S+ E++S + PN +T
Sbjct: 207 SGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYT 266
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQ-------------- 285
+ I I + R+DEA ++ M+ GC P V++Y+ +I + C
Sbjct: 267 YTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMK 326
Query: 286 ---------------------YNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
+ +V E EM+A G P+V+T+T +++ L K+G+ +
Sbjct: 327 ASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNID 386
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTM 384
EA + + M+ G P+ +N LI L R +R+ +A+ ++ M GV P T+
Sbjct: 387 EAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFN-NMETLGVVPTAYTYILF 445
Query: 385 ITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK 444
I + G +KA E+M K+ PN+ + L S + G+ E ++++ + +
Sbjct: 446 IDFYGKSGRSDKALETFEKM-KIRGIAPNIVACNASLYSLAEMGRLRE--AKVIFNRLKS 502
Query: 445 HHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDA 504
+ L+ D TY +++ +A + + A L +M + P +++ + + D
Sbjct: 503 NGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDE 562
Query: 505 AEKIEAVMKKL 515
A K+ +K +
Sbjct: 563 AWKMFCRLKDM 573
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 134/278 (48%), Gaps = 4/278 (1%)
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
NA+++N IH + EA + M G P + ++S ++ + ++ + V LL
Sbjct: 193 NAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLL 252
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
+EM++ G PN+ TYT + L ++G +EA RI ++M+ G PD + LI L A
Sbjct: 253 EEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTA 312
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQ 415
++ +A+ ++ V+M + PD T+ TM+ FS G + EM + + P+V
Sbjct: 313 GKLDDAMELF-VKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEM-EADGYAPDVI 370
Query: 416 TFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFK 475
TF L+ + K G DE L D++ K + ++ TY +I GL R N+ + A LF
Sbjct: 371 TFTILVNALCKAGNIDEAFHLL--DVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFN 428
Query: 476 EMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
M + P T L +D + D A + MK
Sbjct: 429 NMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMK 466
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 125/257 (48%), Gaps = 3/257 (1%)
Query: 127 CPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWE 185
C + ++ + +++ L K +D+ L ++ G T T ++ +G+ E
Sbjct: 853 CSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLE 912
Query: 186 DAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFI 244
+A F+E+ +G N N+L++ K G V A +F + + I P+ ++ +
Sbjct: 913 EAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLV 972
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
C+ RVD+A +++K G + I+Y+ +I R + + L DEMQ++G
Sbjct: 973 GCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGIN 1032
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
P++ TY +++ L +G E+A ++ E+++ +G +P+ +N LI + A V
Sbjct: 1033 PDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAV 1092
Query: 365 YQVEMPENGVAPDTSTF 381
Y+ M G +P+T TF
Sbjct: 1093 YK-RMMVGGCSPNTGTF 1108
>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 189/408 (46%), Gaps = 36/408 (8%)
Query: 113 DWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTI 171
D AL F+ + ++H+ Y+MM++ L R+MD ++ LL++M +G + +
Sbjct: 55 DITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLF 114
Query: 172 AKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-K 230
V+ + AG E A++TF + F ++ + N +LD L E + ++ ++ + K
Sbjct: 115 ISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKK 174
Query: 231 SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSY-------- 282
+ PN T+NI + CK NRVD A + EM GC P +SY+T+I S
Sbjct: 175 DGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKE 234
Query: 283 ----------------------CRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKS 320
C++Y F + ++LLDEM +G PNV++YTT+++ L+ +
Sbjct: 235 ARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDA 294
Query: 321 GDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTST 380
G+ E ++ + KM G P+ F LI EA+ + M GV P+
Sbjct: 295 GNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWD-RMIREGVVPNVVA 353
Query: 381 FNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDD 440
+N ++ A V +M ++ C PNV+T+ L+ K G D S++ +
Sbjct: 354 YNALMHGLCSKRSLGDAVSVFNQM-EINGCCPNVRTYSALIDGYAKAGDLDGA-SEVWNW 411
Query: 441 MVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
M+ H ++ YT ++ LCR + AY L + M + P T
Sbjct: 412 MIT-HGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVT 458
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 182/361 (50%), Gaps = 10/361 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +++ L ++ A+L +M ++G L+T +++ F G +A+ +D +
Sbjct: 284 YTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMI 343
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKINRV 253
G+ N N L+ LC + + A SVF +E+ C P N T++ I G+ K +
Sbjct: 344 REGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCP-NVRTYSALIDGYAKAGDL 402
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
D A M HGCHP V++Y+ ++ CR F++ Y L++ MQ + CPPN VT+ T
Sbjct: 403 DGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTF 462
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
+ L SG + AI++ ++M G P++ +N L+ +L + R EA + + +M G
Sbjct: 463 IKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVK-DMEHRG 521
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
+ + T+NT+I + G +A +L +M + KP+ T + ++ + K GK +
Sbjct: 522 IELNLVTYNTIIYGYCCAGMLGEALELLGKM-VVRGTKPDAITVNIVIDAYCKQGKVNIA 580
Query: 434 LSQLLDDM-VNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLI 492
+ QL+D + K H DI YT +I G+C E A + + M+ I+P T ++
Sbjct: 581 I-QLMDRLSAGKWH--PDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVL 637
Query: 493 L 493
+
Sbjct: 638 V 638
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/416 (25%), Positives = 187/416 (44%), Gaps = 14/416 (3%)
Query: 81 DEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMM 140
+ ++ ++K+D + + + L+ L + D L + + C E S Y +
Sbjct: 166 NPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVS---YTTL 222
Query: 141 VDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLE 200
+ L K+ ++ + R L + V I V + ++ +E+A + DE+ G++
Sbjct: 223 ISSLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEYT----FEEAFQLLDEMMNKGID 278
Query: 201 KNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVDEAQW 258
N + +++ L G VEL+ +V ++ + C PN HTF I G+ EA
Sbjct: 279 PNVISYTTIINALSDAGNVELSLAVLAKMFARGC-SPNLHTFTSLIKGFFLKGGSHEALD 337
Query: 259 TIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLA 318
M G P V++Y+ ++ C + + + ++M+ GC PNV TY+ ++ A
Sbjct: 338 FWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYA 397
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDT 378
K+GD + A + M G P+ + C++ L R S +A + + EN P+T
Sbjct: 398 KAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVEN-CPPNT 456
Query: 379 STFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLL 438
TFNT I G + A V ++M C PN T++ LL S K + E L+
Sbjct: 457 VTFNTFIKGLCGSGRVDWAIKVFDQMGN-SGCFPNTTTYNELLDSLLKDRRFGEAFG-LV 514
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
DM ++ + L++ TY +I+G C A A L +M+ P T +++D
Sbjct: 515 KDMEHRG-IELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVID 569
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 129/295 (43%), Gaps = 39/295 (13%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ L R + ++ +M G + T + ++ ++ AG + A ++ +
Sbjct: 354 YNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMI 413
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKINRV 253
T G N ++D LC+ A + +++++C PPN TFN FI G C RV
Sbjct: 414 THGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENC-PPNTVTFNTFIKGLCGSGRV 472
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
D A +M GC P +Y+ ++ S + F + + L+ +M+ +G N+VTY T+
Sbjct: 473 DWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTI 532
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV----------- 362
+ +G EA+ + KM + G+KPD+ N +I + +V A+
Sbjct: 533 IYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKW 592
Query: 363 -----------------------YVYQVEMPENGVAPDTSTFNTMIT-MFSHHGH 393
VY M G++P+ +T+N ++ +FS+ GH
Sbjct: 593 HPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGH 647
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 122/297 (41%), Gaps = 46/297 (15%)
Query: 83 VFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVD 142
VF ++ + C ++ L++ + D A ++ W + G + Y MVD
Sbjct: 373 VFNQMEINGCCPNVRTYSALIDG--YAKAGDLDGASEVWNWMIT-HGCHPNVVAYTCMVD 429
Query: 143 ILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
+L + +Q L+E M + VT NT ++ G+G+ + A++ FD++G G
Sbjct: 430 VLCRNSMFNQAYCLIENMQVENCPPNTVTFNTF---IKGLCGSGRVDWAIKVFDQMGNSG 486
Query: 199 LEKNTETMNLLLDTLCKEGKVELA---------RSVFLELKS------------------ 231
NT T N LLD+L K+ + A R + L L +
Sbjct: 487 CFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEAL 546
Query: 232 ---------CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSY 282
P+A T NI I +CK +V+ A + + HP +I+Y+++I
Sbjct: 547 ELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGI 606
Query: 283 CRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
C + L M ++G PNV T+ ++ +L + A++ + I+ K
Sbjct: 607 CTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLDASSIMQPK 663
>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
Length = 816
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 167/315 (53%), Gaps = 12/315 (3%)
Query: 183 QWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFN 241
+ ++AV+ F+++ + ++ + +L+D L K GK+ AR++F +L S + P+ +
Sbjct: 303 RIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYT 362
Query: 242 IFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ 301
IHG C N D+A+ +M GC P ++Y+ +I + C++ + +L+ +M
Sbjct: 363 SLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIED 422
Query: 302 GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
G P+VVTY TVM L KS EEA+ + +M+ +G P+ R N +I L + S++ +A
Sbjct: 423 GHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQA 482
Query: 362 VYVYQVE--------MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPN 413
+++ M ++G PD T++T+I+ + A H+LE+M K CKP
Sbjct: 483 CQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVK-RQCKPT 541
Query: 414 VQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLL 473
V T + L+ K G+ E ++LD MV+ S D+ TY ++HG CRA + E A L
Sbjct: 542 VVTQNTLIHGLCKAGRIKEA-REVLDAMVSSGQ-SPDVVTYNTLVHGHCRAGQTERAREL 599
Query: 474 FKEMIGHDITPRYQT 488
+M+ + P T
Sbjct: 600 LSDMVARGLAPNVVT 614
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 170/360 (47%), Gaps = 17/360 (4%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIA--KVMRRFSGAGQWEDAVRTFDEL 194
Y +++D L K +++ R L +++ VT +T+A ++ A ++DA F ++
Sbjct: 326 YGILIDGLAKAGKLNDARNLFQKLLHSG-VTPSTVAYTSLIHGLCMANSFDDARELFADM 384
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRV 253
G + T N+++D CK G +E A + ++ + P+ T+N + G CK +RV
Sbjct: 385 NRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRV 444
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYN---------FSKVYELLDEMQAQGCP 304
+EA EM+ GC P S++TII C+Q + + LL M G
Sbjct: 445 EEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHV 504
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
P+VVTY+T++S L ++A + E M KP N LI+ L +A R++EA V
Sbjct: 505 PDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREV 564
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
M +G +PD T+NT++ G E+A +L +M PNV T+ L+
Sbjct: 565 LDA-MVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVA-RGLAPNVVTYTALVSGL 622
Query: 425 FKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
K + E + + ++ TYT +I G C A + + LF EM+ I+P
Sbjct: 623 CKANRLPEACGVFAQ--MKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISP 680
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 109/446 (24%), Positives = 183/446 (41%), Gaps = 59/446 (13%)
Query: 85 QSLKQDHVCNAIQPSHYLVNKLIHRF-----KDDWKSALGIFRWAGSCPGYEHSSEIYEM 139
++L Q + + + PS LIH DD + G CP S Y +
Sbjct: 343 RNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRG-CP---PSPVTYNV 398
Query: 140 MVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
M+D K +++ L+++M GH+ + T VM + + E+A+ F+E+ G
Sbjct: 399 MIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLG 458
Query: 199 LEKNTETMNLLLDTLCKEGKVELA------RSVFLELKSC-----IP------------- 234
N + N ++ LC++ K++ A F LK +P
Sbjct: 459 CTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLC 518
Query: 235 ---------------------PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI 273
P T N IHG CK R+ EA+ + M G P V+
Sbjct: 519 SIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVV 578
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
+Y+T++ +CR + ELL +M A+G PNVVTYT ++S L K+ EA + +M
Sbjct: 579 TYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQM 638
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
K G P+ + LI A +V + ++ EM G++PD + T+ G
Sbjct: 639 KSSGCAPNLFTYTALILGFCSAGQVDGGLKLFG-EMVCAGISPDHVVYGTLAAELCKSGR 697
Query: 394 HEKAFHVLEEMNK-LEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
+A +L E + L + + + + GK + L + DMV L
Sbjct: 698 SARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALG-FVRDMVRGGQLPAPER 756
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMI 478
+LV GLC++ + A + +E++
Sbjct: 757 CASLV-AGLCKSGQGGEARAVLEEIM 781
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 109/489 (22%), Positives = 204/489 (41%), Gaps = 87/489 (17%)
Query: 94 NAIQPSHYLVNKLIHRFKDDWKS--ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMD 151
I P+ L +I + + ++ A+ IF C + ++Y +++D L K ++ +
Sbjct: 4 QGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEEC--HSPYPDVYNVLIDSLSKRQETE 61
Query: 152 QMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLL 210
++ +++ M +G T ++ AG+ ++A DE+ + + T + L
Sbjct: 62 AVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLA 121
Query: 211 DTLCKEGKVELARSVFLELKSCIP-PNAHTFNIFIHGWCKINRVDEA------------- 256
LC G +E A +L +P N+ +NI + CK RVD+A
Sbjct: 122 HELCLRGSMERA----FQLLEIMPVANSSAYNIVVVALCKAARVDDALELARTMSEKRIP 177
Query: 257 -------------------QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDE 297
+Q + + PC+++ + +++ +C + K ELL
Sbjct: 178 LAAGSLDSVLVGLMDSGRIDEALQVYRENRREPCLVTLNVLLEGFCSRGQVDKARELLRA 237
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI---------------------------- 329
M + C P+ V+Y TV+ L K+G EEA+R+
Sbjct: 238 MPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILG 297
Query: 330 -------------TEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
EKM PDS + LI L +A ++ +A ++Q ++ +GV P
Sbjct: 298 LCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQ-KLLHSGVTP 356
Query: 377 DTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQ 436
T + ++I + A + +MN+ C P+ T++ ++ + K G +E
Sbjct: 357 STVAYTSLIHGLCMANSFDDARELFADMNR-RGCPPSPVTYNVMIDASCKRGMLEEA-CD 414
Query: 437 LLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV 496
L+ M+ H+ D+ TY V+ GLC++++ E A LLF EM TP ++ I+ +
Sbjct: 415 LIKKMIEDGHVP-DVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGL 473
Query: 497 KQKHMYDAA 505
Q+ D A
Sbjct: 474 CQQSKIDQA 482
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/377 (21%), Positives = 158/377 (41%), Gaps = 56/377 (14%)
Query: 184 WEDAVRTFDELGTFGLEKN-----TETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPN 236
W + RTF+ + F L + + N+L+D+L K + E + + + + C P +
Sbjct: 20 WCNVGRTFEAVKIFSLMEECHSPYPDVYNVLIDSLSKRQETEAVKKMVQVMVDRGCFP-D 78
Query: 237 AHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLD 296
+ TF + G CK ++DEA+ + EM+ P + S + C + + + ++LL+
Sbjct: 79 SFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHELCLRGSMERAFQLLE 138
Query: 297 EMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRAS 356
M N Y V+ L K+ ++A+ + M + + ++ L +
Sbjct: 139 IMPVA----NSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLVGLMDSG 194
Query: 357 RVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQT 416
R+ EA+ VY+ EN P T N ++ F G +KA +L M E C P+ +
Sbjct: 195 RIDEALQVYR----ENRREPCLVTLNVLLEGFCSRGQVDKARELLRAMPD-EECAPDEVS 249
Query: 417 FHPLLKSCFKTGKTDE---------------------------------CLSQLLDDMV- 442
+ +L K G+ +E C + +D+ V
Sbjct: 250 YCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQ 309
Query: 443 -----NKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVK 497
N+ ++S D +Y ++I GL +A K A LF++++ +TP ++ +
Sbjct: 310 MFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLC 369
Query: 498 QKHMYDAAEKIEAVMKK 514
+ +D A ++ A M +
Sbjct: 370 MANSFDDARELFADMNR 386
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 70/145 (48%), Gaps = 6/145 (4%)
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHC-KPNVQTFHPLLKSCFKT 427
M + G+ P F ++I + + G + F ++ + +E C P ++ L+ S K
Sbjct: 1 MFQQGIFPAPLLFTSVIQGWCNVG---RTFEAVKIFSLMEECHSPYPDVYNVLIDSLSKR 57
Query: 428 GKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
+T E + +++ MV++ D T+T ++ GLC+A K + A L+ EM I P +
Sbjct: 58 QET-EAVKKMVQVMVDRGCFP-DSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFA 115
Query: 488 TCRLILDEVKQKHMYDAAEKIEAVM 512
T + E+ + + A ++ +M
Sbjct: 116 TSSFLAHELCLRGSMERAFQLLEIM 140
>gi|357156708|ref|XP_003577549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Brachypodium distachyon]
Length = 522
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 181/384 (47%), Gaps = 21/384 (5%)
Query: 133 SSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
+++ Y+ +VD LG+ Q D L+ E + T T A + RR+ AG AVR FD
Sbjct: 113 NADAYDAVVDALGRAHQFDAAWRLVVEAAADGAATSRTFAVLARRYVAAGMTRQAVRAFD 172
Query: 193 ELGTF-GLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKIN 251
++ F G E + LLDTLCK ++A VF + K PN + I I+GWCK+N
Sbjct: 173 DMEAFVGREPDAGEFTTLLDTLCKYKYPKVATEVFNKRKYKYEPNEKMYTILIYGWCKVN 232
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF----------SKVYELLDEMQAQ 301
R D +Q +++M HG P V++Y+ ++ CR + +LL EM+ +
Sbjct: 233 RNDMSQKFLKDMIDHGIEPNVVTYNILLNGVCRHASLHPDNRFDRTVRAAEDLLKEMRDR 292
Query: 302 GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
G P+V +Y+ V+ +++ E + + MK G P + +I L R+++A
Sbjct: 293 GIEPDVTSYSIVLHVYSRAHKAELCLCMFRSMKDRGICPTVATYTSVIKCLASCGRLEDA 352
Query: 362 VYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH----CKPNVQTF 417
+ EM GV P +T+N F + + LE K++ P++ ++
Sbjct: 353 ERLLH-EMASEGVCPSPATYN---CFFKEYRGRKDVIGALELYKKMKAPASPTAPDIHSY 408
Query: 418 HPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
H LL K + +++L +DM + + D+ +YTL+IHG C K A F EM
Sbjct: 409 HILLGMFVKLNQHG-TVTELWNDMC-ESTVGPDLDSYTLLIHGFCENEKWREACQFFMEM 466
Query: 478 IGHDITPRYQTCRLILDEVKQKHM 501
I P+ T ++ + Q M
Sbjct: 467 IEKGFLPQKITFEILYRGLIQADM 490
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 125/484 (25%), Positives = 221/484 (45%), Gaps = 102/484 (21%)
Query: 121 FRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTI---AKVMRR 177
F+W G H+ E + ++ +L + +++RALL+ +K + +TI V+
Sbjct: 94 FKWTQKEFGAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSNSTIFHSLSVLGS 153
Query: 178 FSGA---------------GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELA 222
+ A G+ + A+ FD G +G + + N +L +L KEG++ +
Sbjct: 154 WGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVV 213
Query: 223 RSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQS 281
SV+ E+ + I N TF++ I+G CK+ + +A +++MK G P VI+Y+TII
Sbjct: 214 ESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDG 273
Query: 282 YC-----------------------------------RQYNFSKVYELLDEMQAQGCPPN 306
YC R N + ++ +EMQ QG PN
Sbjct: 274 YCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPN 333
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPD--------SRF-------------- 344
VVTY ++++ L +G +EA+ + +KM +G KP+ + F
Sbjct: 334 VVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLD 393
Query: 345 -------------FNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHH 391
FN LI G+A R+ +A ++ + M + GV P+ ST+N +I F
Sbjct: 394 DIGKRGLAPNVITFNTLIDAYGKAGRMDDA-FLLRSMMLDTGVCPNVSTYNCLIVGFCRE 452
Query: 392 GHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDM--VNKHHLSL 449
G+ ++A + +EM K ++ T++ L+ + K G+T + + +LLD+M + K
Sbjct: 453 GNVKEARKLAKEMEG-NGLKADLVTYNILVDALCKKGETRKAV-RLLDEMTLMEKKGRRA 510
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQK--------HM 501
+I TY ++I G C K E A L EM+ + P T ++ DE+ +K H+
Sbjct: 511 NIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFIPDIDGHL 570
Query: 502 YDAA 505
Y+ +
Sbjct: 571 YNVS 574
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 141/307 (45%), Gaps = 26/307 (8%)
Query: 33 SHIVSSSPIESYCSDGARLDHHQVLC-VDSPRLPDIDVIISKVHVGSSEDE-------VF 84
S I ++ I+ YC G +L + + R+ ++ + + G DE VF
Sbjct: 263 SVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVF 322
Query: 85 QSLKQDHVCNAIQPSHYLVNKLIHRFKDDWK--SALGIFRWAGSCPGYEHSSEIYEMMVD 142
+ +++ +QP+ N LI+ + K ALG+ + S G + + Y +++
Sbjct: 323 EEMQRQ----GLQPNVVTYNSLINGLCSNGKLDEALGL-QDKMSGMGLKPNVVTYNALIN 377
Query: 143 ILGKVRQMDQMRALLEEMSK----GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
K + + + R +L+++ K +++T NT+ + + AG+ +DA + G
Sbjct: 378 GFCKKKMLKEAREMLDDIGKRGLAPNVITFNTL---IDAYGKAGRMDDAFLLRSMMLDTG 434
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQ 257
+ N T N L+ C+EG V+ AR + E++ + + + T+NI + CK +A
Sbjct: 435 VCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAV 494
Query: 258 WTIQEM---KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
+ EM + G +++Y+ +I+ +C + + LL+EM +G PN TY +
Sbjct: 495 RLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILR 554
Query: 315 SYLAKSG 321
+ + G
Sbjct: 555 DEMMEKG 561
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 48/240 (20%), Positives = 96/240 (40%), Gaps = 42/240 (17%)
Query: 277 TIIQSYCRQ--YNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
++ S+ + Y+ S ++ L + + GC +++ V +Y+ K+G+ + A+ ++
Sbjct: 128 ALLDSFAKNAHYSNSTIFHSLSVLGSWGCANSIIVDMLVWAYV-KNGEMDLALEGFDRAG 186
Query: 335 IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHH 394
G + + N ++ +L + R+ VY+ EM + + TF+ +I G
Sbjct: 187 DYGFRLSALSCNPMLVSLVKEGRIGVVESVYK-EMIRRRIGVNVVTFDVVINGLCKVGKF 245
Query: 395 EKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTY 454
+KA +++DM S + TY
Sbjct: 246 QKA-------------------------------------GDVVEDM-KAWGFSPSVITY 267
Query: 455 TLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
+I G C+A K A L KEM+ I P T +++D + AA+K+ M++
Sbjct: 268 NTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQR 327
>gi|238478688|ref|NP_174320.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332193082|gb|AEE31203.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 806
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 208/437 (47%), Gaps = 21/437 (4%)
Query: 83 VFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVD 142
+ +SLK VC + R +DD + AL F WA Y H +Y M++
Sbjct: 168 LLRSLKPSQVCAVL------------RSQDDERVALKFFYWADRQWRYRHDPMVYYSMLE 215
Query: 143 ILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEK 201
+L K + R +L M +G T ++VM +S AGQ DA++ + G+E
Sbjct: 216 VLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEP 275
Query: 202 NTETMNLLLDTLCKEGKVELARSVFLELKSC--IPPNAHTFNIFIHGWCKINRVDEAQWT 259
N N +D + ++E A FLE I PN T+N I G+C ++RV+EA
Sbjct: 276 NLLICNTTIDVFVRANRLEKALR-FLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIEL 334
Query: 260 IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ-GCPPNVVTYTTVMSYLA 318
+++M GC P +SY TI+ C++ +V +L+ +M + G P+ VTY T++ L
Sbjct: 335 LEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLT 394
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDT 378
K +EA+ + + G + D ++ +++ L + R+ EA + + + PD
Sbjct: 395 KHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDV 454
Query: 379 STFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLL 438
T+ ++ F G +KA +L+ M+ H KPN ++ LL +TGK+ E +
Sbjct: 455 VTYTAVVNGFCRLGEVDKAKKLLQVMHTHGH-KPNTVSYTALLNGMCRTGKSLEAREMM- 512
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-K 497
+M +H S + TY++++HGL R K A + +EM+ P L+L + +
Sbjct: 513 -NMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCR 571
Query: 498 QKHMYDAAEKIEAVMKK 514
++A + +E + K
Sbjct: 572 DGRTHEARKFMEECLNK 588
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 180/372 (48%), Gaps = 24/372 (6%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGH-----IVTLNTIAKVMRRFSGAGQWEDAVRTF 191
Y ++ L K +++ ++R L+++M+K H VT NT+ ++ + A ++A+
Sbjct: 350 YYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHA---DEALWFL 406
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCK 249
+ G + + ++ LCKEG++ A+ + E+ K PP+ T+ ++G+C+
Sbjct: 407 KDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCR 466
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
+ VD+A+ +Q M HG P +SY+ ++ CR + E+++ + PN +T
Sbjct: 467 LGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSIT 526
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM 369
Y+ +M L + G EA + +M + G P N L+ +L R R EA + E
Sbjct: 527 YSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEA-RKFMEEC 585
Query: 370 PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
G A + F T+I F + + A VL++M L + +V T+ L+ + K G+
Sbjct: 586 LNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMY-LINKHADVFTYTTLVDTLGKKGR 644
Query: 430 TDECLSQLLDDMVNKHHLSLDIT--TYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
E ++L+ M+ H +D T TY VIH C+ K + + ++MI Q
Sbjct: 645 IAEA-TELMKKML---HKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISR------Q 694
Query: 488 TCRLILDEVKQK 499
CR I ++V +K
Sbjct: 695 KCRTIYNQVIEK 706
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 100/436 (22%), Positives = 185/436 (42%), Gaps = 50/436 (11%)
Query: 82 EVFQSLKQDHVCNAIQPSHYLVNKLIHRFK--DDWKSALGIFRWAGSCPGYEHSSEIYEM 139
++ + + ++H + P N LIH D AL + A G+ Y
Sbjct: 368 DLMKKMAKEH---GLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQE-KGFRIDKLGYSA 423
Query: 140 MVDILGKVRQMDQMRALLEEM-SKGHIVT-LNTIAKVMRRFSGAGQWEDAVRTFDELGTF 197
+V L K +M + + L+ EM SKGH + T V+ F G+ + A + + T
Sbjct: 424 IVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTH 483
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRVDEA 256
G + NT + LL+ +C+ GK AR + + + PN+ T+++ +HG + ++ EA
Sbjct: 484 GHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEA 543
Query: 257 QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSY 316
++EM G P + + ++QS CR + + ++E +GC NVV +TTV+
Sbjct: 544 CDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHG 603
Query: 317 LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
++ + + A+ + + M ++ D + L+ TLG+ R+ EA + + +M G+ P
Sbjct: 604 FCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMK-KMLHKGIDP 662
Query: 377 DTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQ 436
T+ T+I + G + +LE+M + C+
Sbjct: 663 TPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCR------------------------- 697
Query: 437 LLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV 496
T Y VI LC K E A L +++ +TC +++
Sbjct: 698 ---------------TIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGY 742
Query: 497 KQKHMYDAAEKIEAVM 512
+K + +A K+ M
Sbjct: 743 LKKGVPLSAYKVACRM 758
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 87/212 (41%), Gaps = 4/212 (1%)
Query: 152 QMRALLEE-MSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLL 210
+ R +EE ++KG + + V+ F + + A+ D++ + T L+
Sbjct: 577 EARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLV 636
Query: 211 DTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCH 269
DTL K+G++ A + + L I P T+ IH +C++ +VD+ +++M
Sbjct: 637 DTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISR--Q 694
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI 329
C Y+ +I+ C + LL ++ + T +M K G A ++
Sbjct: 695 KCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKV 754
Query: 330 TEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
+M PD + L L +V EA
Sbjct: 755 ACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEA 786
>gi|125528152|gb|EAY76266.1| hypothetical protein OsI_04202 [Oryza sativa Indica Group]
Length = 528
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 116/419 (27%), Positives = 199/419 (47%), Gaps = 13/419 (3%)
Query: 93 CNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQ 152
C A S +V ++ R ++ +A FRWA + PGY Y M+ IL K R+ D
Sbjct: 105 CGATA-SEPVVVAVLARLRNSCAAAHAAFRWASAQPGYAPGRHAYHSMLAILAKHRRFDD 163
Query: 153 MRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDT 212
RALL++M + + + + ++RR+ A AV F L + G + LL
Sbjct: 164 ARALLDQMRRSSLASPAAVMLLIRRYCAARDVAGAVAAFRALPSLGFRPGVAEFHGLLTA 223
Query: 213 LCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINR-VDEAQ--WTIQEMKGHGCH 269
LC+ V+ A + L + P +FN+ ++GWC + R V EA+ W E+K G
Sbjct: 224 LCRYKNVQDAEHLLLSSEKEFPFETKSFNVVLNGWCNMVRSVREAKRFWNAMEIK--GIK 281
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI 329
V+SY ++I + + + V +L + M+ G P+ Y V+ LAK EA +
Sbjct: 282 RDVVSYGSMISCFSKAGSLDTVMKLFNRMKEAGVVPDRKIYNAVVYALAKGRCVNEAKAL 341
Query: 330 TEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFS 389
M+ G PD+ FN LI L +A +VQEA + +M G++P TF+ ++ +
Sbjct: 342 VRSMEEKGVAPDTATFNSLIRPLCKARQVQEARKMLD-DMLGRGLSPSVRTFHALLDVAR 400
Query: 390 HHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSL 449
+ F +L++M +L+ C P + TF L++ F + + + +L M + LS
Sbjct: 401 ---SPIEVFDLLDKMKELQ-CDPEMDTFIMLIRK-FCRWRQHDSVEKLWSAM-PANGLSP 454
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
D + Y ++IHGL + E + ++EM P +T +I + + + A+ +
Sbjct: 455 DRSAYIVLIHGLFLNGRLEESAKYYEEMKAKGFPPEKKTEEMIQAWLSGRELAKASASV 513
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/281 (18%), Positives = 124/281 (44%), Gaps = 16/281 (5%)
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG-CHPCVISYSTIIQSYCRQYNFSKVYE 293
P H ++ + K R D+A+ + +M+ P + +I+ YC + +
Sbjct: 143 PGRHAYHSMLAILAKHRRFDDARALLDQMRRSSLASPAAVML--LIRRYCAARDVAGAVA 200
Query: 294 LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP---DSRFFNCLIY 350
+ + G P V + +++ L + + ++A E + + K +++ FN ++
Sbjct: 201 AFRALPSLGFRPGVAEFHGLLTALCRYKNVQDA----EHLLLSSEKEFPFETKSFNVVLN 256
Query: 351 TLGRASR-VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH 409
R V+EA + M G+ D ++ +MI+ FS G + + M K
Sbjct: 257 GWCNMVRSVREAKRFWNA-MEIKGIKRDVVSYGSMISCFSKAGSLDTVMKLFNRM-KEAG 314
Query: 410 CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEW 469
P+ + ++ ++ + K +E ++ L + + ++ D T+ +I LC+A + +
Sbjct: 315 VVPDRKIYNAVVYALAKGRCVNE--AKALVRSMEEKGVAPDTATFNSLIRPLCKARQVQE 372
Query: 470 AYLLFKEMIGHDITPRYQTCRLILDEVKQK-HMYDAAEKIE 509
A + +M+G ++P +T +LD + ++D +K++
Sbjct: 373 ARKMLDDMLGRGLSPSVRTFHALLDVARSPIEVFDLLDKMK 413
>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Vitis vinifera]
Length = 666
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 189/408 (46%), Gaps = 36/408 (8%)
Query: 113 DWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTI 171
D AL F+ + ++H+ Y+MM++ L R+MD ++ LL++M +G + +
Sbjct: 55 DITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLF 114
Query: 172 AKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-K 230
V+ + AG E A++TF + F ++ + N +LD L E + ++ ++ + K
Sbjct: 115 ISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKK 174
Query: 231 SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSY-------- 282
+ PN T+NI + CK NRVD A + EM GC P +SY+T+I S
Sbjct: 175 DGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKE 234
Query: 283 ----------------------CRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKS 320
C++Y F + ++LLDEM +G PNV++YTT+++ L+ +
Sbjct: 235 ARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDA 294
Query: 321 GDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTST 380
G+ E ++ + KM G P+ F LI EA+ + M GV P+
Sbjct: 295 GNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWD-RMIREGVVPNVVA 353
Query: 381 FNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDD 440
+N ++ A V +M ++ C PNV+T+ L+ K G D S++ +
Sbjct: 354 YNALMHGLCSKRSLGDAVSVFNQM-EINGCCPNVRTYSALIDGYAKAGDLDGA-SEVWNW 411
Query: 441 MVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
M+ H ++ YT ++ LCR + AY L + M + P T
Sbjct: 412 MIT-HGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVT 458
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 182/361 (50%), Gaps = 10/361 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +++ L ++ A+L +M ++G L+T +++ F G +A+ +D +
Sbjct: 284 YTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMI 343
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKINRV 253
G+ N N L+ LC + + A SVF +E+ C P N T++ I G+ K +
Sbjct: 344 REGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCP-NVRTYSALIDGYAKAGDL 402
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
D A M HGCHP V++Y+ ++ CR F++ Y L++ MQ + CPPN VT+ T
Sbjct: 403 DGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTF 462
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
+ L SG + AI++ ++M G P++ +N L+ +L + R EA + + +M G
Sbjct: 463 IKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVK-DMEHRG 521
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
+ + T+NT+I + G +A +L +M + KP+ T + ++ + K GK +
Sbjct: 522 IELNLVTYNTIIYGYCCAGMLGEALELLGKM-VVRGTKPDAITVNIVIDAYCKQGKVNIA 580
Query: 434 LSQLLDDM-VNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLI 492
+ QL+D + K H DI YT +I G+C E A + + M+ I+P T ++
Sbjct: 581 I-QLMDRLSAGKWH--PDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVL 637
Query: 493 L 493
+
Sbjct: 638 V 638
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/416 (25%), Positives = 187/416 (44%), Gaps = 14/416 (3%)
Query: 81 DEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMM 140
+ ++ ++K+D + + + L+ L + D L + + C E S Y +
Sbjct: 166 NPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVS---YTTL 222
Query: 141 VDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLE 200
+ L K+ ++ + R L + V I V + ++ +E+A + DE+ G++
Sbjct: 223 ISSLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEYT----FEEAFQLLDEMMNKGID 278
Query: 201 KNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVDEAQW 258
N + +++ L G VEL+ +V ++ + C PN HTF I G+ EA
Sbjct: 279 PNVISYTTIINALSDAGNVELSLAVLAKMFARGC-SPNLHTFTSLIKGFFLKGGSHEALD 337
Query: 259 TIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLA 318
M G P V++Y+ ++ C + + + ++M+ GC PNV TY+ ++ A
Sbjct: 338 FWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYA 397
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDT 378
K+GD + A + M G P+ + C++ L R S +A + + EN P+T
Sbjct: 398 KAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVEN-CPPNT 456
Query: 379 STFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLL 438
TFNT I G + A V ++M C PN T++ LL S K + E L+
Sbjct: 457 VTFNTFIKGLCGSGRVDWAIKVFDQMGN-SGCFPNTTTYNELLDSLLKDRRFGEAFG-LV 514
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
DM ++ + L++ TY +I+G C A A L +M+ P T +++D
Sbjct: 515 KDMEHRG-IELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVID 569
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 129/295 (43%), Gaps = 39/295 (13%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ L R + ++ +M G + T + ++ ++ AG + A ++ +
Sbjct: 354 YNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMI 413
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKINRV 253
T G N ++D LC+ A + +++++C PPN TFN FI G C RV
Sbjct: 414 THGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENC-PPNTVTFNTFIKGLCGSGRV 472
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
D A +M GC P +Y+ ++ S + F + + L+ +M+ +G N+VTY T+
Sbjct: 473 DWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTI 532
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV----------- 362
+ +G EA+ + KM + G+KPD+ N +I + +V A+
Sbjct: 533 IYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKW 592
Query: 363 -----------------------YVYQVEMPENGVAPDTSTFNTMIT-MFSHHGH 393
VY M G++P+ +T+N ++ +FS+ GH
Sbjct: 593 HPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGH 647
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 127/302 (42%), Gaps = 48/302 (15%)
Query: 83 VFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVD 142
VF ++ + C ++ L++ + D A ++ W + G + Y MVD
Sbjct: 373 VFNQMEINGCCPNVRTYSALIDG--YAKAGDLDGASEVWNWMIT-HGCHPNVVAYTCMVD 429
Query: 143 ILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
+L + +Q L+E M + VT NT K + G+G+ + A++ FD++G G
Sbjct: 430 VLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGL---CGSGRVDWAIKVFDQMGNSG 486
Query: 199 LEKNTETMNLLLDTLCKEGKVELA---------RSVFLELKS------------------ 231
NT T N LLD+L K+ + A R + L L +
Sbjct: 487 CFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEAL 546
Query: 232 ---------CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSY 282
P+A T NI I +CK +V+ A + + HP +I+Y+++I
Sbjct: 547 ELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGI 606
Query: 283 CRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDS 342
C + L M ++G PNV T+ ++ +L + A++ + ++GS ++
Sbjct: 607 CTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLD--AVLGSGFET 664
Query: 343 RF 344
RF
Sbjct: 665 RF 666
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 190/378 (50%), Gaps = 9/378 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKG-HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +++ K ++D +L+ M+ +VT NTI +R +G+ + A+ D
Sbjct: 130 YNVLISGYCKSGEIDNALQVLDRMNVAPDVVTYNTI---LRTLCDSGKLKQAMEVLDRQL 186
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVD 254
+ T +L++ CKE V A + E+++ P+ T+N+ I+G CK R+D
Sbjct: 187 QKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLD 246
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA + M +GC P VI+++ I++S C + +LL +M +GC P+VVT+ ++
Sbjct: 247 EAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILI 306
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
++L + G AI I EKM + G P+S +N L++ + ++ A+ + M G
Sbjct: 307 NFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDI-MVSRGC 365
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
PD T+NT++T G + A +L +++ + C P + T++ ++ K GKT+ +
Sbjct: 366 YPDIVTYNTLLTALCKDGKVDVAVEILNQLSS-KGCSPVLITYNTVIDGLSKVGKTERAI 424
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
+LLD+M + L DI TY+ ++ GL R K + A F ++ G I P T I+
Sbjct: 425 -KLLDEM-RRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIML 482
Query: 495 EVKQKHMYDAAEKIEAVM 512
+ + D A A M
Sbjct: 483 GLCKSRQTDRAIDFLAYM 500
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 172/364 (47%), Gaps = 6/364 (1%)
Query: 151 DQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLL 210
D + L + +G I + ++R F G+ + A + L G + T N+L+
Sbjct: 75 DGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLI 134
Query: 211 DTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHP 270
CK G+++ A V + + P+ T+N + C ++ +A + C+P
Sbjct: 135 SGYCKSGEIDNALQVLDRMN--VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYP 192
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRIT 330
VI+Y+ +I++ C++ + +LLDEM+ +G P+VVTY +++ + K G +EAI+
Sbjct: 193 DVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFL 252
Query: 331 EKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSH 390
M G +P+ N ++ ++ R +A + +M G +P TFN +I
Sbjct: 253 NNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLS-DMLRKGCSPSVVTFNILINFLCR 311
Query: 391 HGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLD 450
G +A +LE+M + C PN +++PLL K K D + + LD MV++ D
Sbjct: 312 QGLLGRAIDILEKM-PMHGCTPNSLSYNPLLHGFCKEKKMDRAI-EYLDIMVSRGCYP-D 368
Query: 451 ITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEA 510
I TY ++ LC+ K + A + ++ +P T ++D + + + A K+
Sbjct: 369 IVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLD 428
Query: 511 VMKK 514
M++
Sbjct: 429 EMRR 432
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 165/314 (52%), Gaps = 13/314 (4%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++++ + K ++D+ L M + +++T N I +R G+W DA +
Sbjct: 232 YNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNII---LRSMCSTGRWMDAEKLLS 288
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKI 250
++ G + T N+L++ LC++G + A + + + C PN+ ++N +HG+CK
Sbjct: 289 DMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGC-TPNSLSYNPLLHGFCKE 347
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
++D A + M GC+P +++Y+T++ + C+ E+L+++ ++GC P ++TY
Sbjct: 348 KKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITY 407
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
TV+ L+K G E AI++ ++M+ G KPD ++ L+ L R +V EA+ + ++
Sbjct: 408 NTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFH-DLE 466
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKT 430
G+ P+ T+N+++ ++A L M + CKP T+ L++ G
Sbjct: 467 GLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMIS-KRCKPTEATYTILIEGIAYEGLA 525
Query: 431 DECLSQLLDDMVNK 444
E L LL+++ ++
Sbjct: 526 KEAL-DLLNELCSR 538
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 84/168 (50%), Gaps = 2/168 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ L K ++D +L ++S KG L T V+ S G+ E A++ DE+
Sbjct: 372 YNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMR 431
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVD 254
GL+ + T + L+ L +EGKV+ A F +L+ I PNA T+N + G CK + D
Sbjct: 432 RKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTD 491
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
A + M C P +Y+ +I+ + + +LL+E+ ++G
Sbjct: 492 RAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRG 539
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 190/378 (50%), Gaps = 9/378 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKG-HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +++ K ++D +L+ M+ +VT NTI +R +G+ + A+ D
Sbjct: 187 YNVLISGYCKSGEIDNALQVLDRMNVAPDVVTYNTI---LRTLCDSGKLKQAMEVLDRQL 243
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVD 254
+ T +L++ CKE V A + E+++ P+ T+N+ I+G CK R+D
Sbjct: 244 QKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLD 303
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA + M +GC P VI+++ I++S C + +LL +M +GC P+VVT+ ++
Sbjct: 304 EAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILI 363
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
++L + G AI I EKM + G P+S +N L++ + ++ A+ + M G
Sbjct: 364 NFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDI-MVSRGC 422
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
PD T+NT++T G + A +L +++ + C P + T++ ++ K GKT+ +
Sbjct: 423 YPDIVTYNTLLTALCKDGKVDVAVEILNQLSS-KGCSPVLITYNTVIDGLSKVGKTERAI 481
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
+LLD+M + L DI TY+ ++ GL R K + A F ++ G I P T I+
Sbjct: 482 -KLLDEM-RRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIML 539
Query: 495 EVKQKHMYDAAEKIEAVM 512
+ + D A A M
Sbjct: 540 GLCKSRQTDRAIDFLAYM 557
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 165/314 (52%), Gaps = 13/314 (4%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++++ + K ++D+ L M + +++T N I +R G+W DA +
Sbjct: 289 YNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNII---LRSMCSTGRWMDAEKLLS 345
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKI 250
++ G + T N+L++ LC++G + A + + + C P N+ ++N +HG+CK
Sbjct: 346 DMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTP-NSLSYNPLLHGFCKE 404
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
++D A + M GC+P +++Y+T++ + C+ E+L+++ ++GC P ++TY
Sbjct: 405 KKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITY 464
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
TV+ L+K G E AI++ ++M+ G KPD ++ L+ L R +V EA+ + ++
Sbjct: 465 NTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFH-DLE 523
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKT 430
G+ P+ T+N+++ ++A L M + CKP T+ L++ G
Sbjct: 524 GLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMIS-KRCKPTEATYTILIEGIAYEGLA 582
Query: 431 DECLSQLLDDMVNK 444
E L LL+++ ++
Sbjct: 583 KEAL-DLLNELCSR 595
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 172/364 (47%), Gaps = 6/364 (1%)
Query: 151 DQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLL 210
D + L + +G I + ++R F G+ + A + L G + T N+L+
Sbjct: 132 DGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLI 191
Query: 211 DTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHP 270
CK G+++ A V + + P+ T+N + C ++ +A + C+P
Sbjct: 192 SGYCKSGEIDNALQVLDRMN--VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYP 249
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRIT 330
VI+Y+ +I++ C++ + +LLDEM+ +G P+VVTY +++ + K G +EAI+
Sbjct: 250 DVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFL 309
Query: 331 EKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSH 390
M G +P+ N ++ ++ R +A + +M G +P TFN +I
Sbjct: 310 NNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLS-DMLRKGCSPSVVTFNILINFLCR 368
Query: 391 HGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLD 450
G +A +LE+M + C PN +++PLL K K D + + LD MV++ D
Sbjct: 369 QGLLGRAIDILEKM-PMHGCTPNSLSYNPLLHGFCKEKKMDRAI-EYLDIMVSRGCYP-D 425
Query: 451 ITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEA 510
I TY ++ LC+ K + A + ++ +P T ++D + + + A K+
Sbjct: 426 IVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLD 485
Query: 511 VMKK 514
M++
Sbjct: 486 EMRR 489
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 84/168 (50%), Gaps = 2/168 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ L K ++D +L ++S KG L T V+ S G+ E A++ DE+
Sbjct: 429 YNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMR 488
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVD 254
GL+ + T + L+ L +EGKV+ A F +L+ I PNA T+N + G CK + D
Sbjct: 489 RKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTD 548
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
A + M C P +Y+ +I+ + + +LL+E+ ++G
Sbjct: 549 RAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRG 596
>gi|226505250|ref|NP_001147833.1| GTP binding protein [Zea mays]
gi|195614010|gb|ACG28835.1| GTP binding protein [Zea mays]
gi|413952711|gb|AFW85360.1| GTP binding protein [Zea mays]
Length = 547
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 204/400 (51%), Gaps = 8/400 (2%)
Query: 90 DHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQ 149
D + A+ P LV +++ + AL FRWA G+ +++E + +++ LGK++Q
Sbjct: 119 DALGVAVSPE--LVAEVLKNLSNAGMLALAFFRWAERQEGFSYTAEGFHNLIEALGKIKQ 176
Query: 150 MDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLL 209
+ +L+E M +++ +T ++RR++ A + ++AV TF+++ FGL+ N L
Sbjct: 177 FRLVWSLVETMRCRGLLSKDTFKLIVRRYARARKVKEAVETFEKMSIFGLKTELSDYNWL 236
Query: 210 LDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG 267
+DTL K +V+ A++++ E+ K P+ T+ + + GW + + QEM G
Sbjct: 237 IDTLSKSKQVKKAQAIYKEMKRKGKFVPDLKTYTVLMEGWGHEKDLLMVKTMYQEMIDAG 296
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
P V++Y +I ++C+ + ++ EM+A GC P+ Y +++ L +EA+
Sbjct: 297 IRPDVVAYGMLISAFCKSGKCDEAIKVFYEMEASGCMPSPHVYCMLINGLGSEERLDEAL 356
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITM 387
+ E K G + N ++ RAS+ Q A + EM + V P++ T++ ++
Sbjct: 357 KYFEHYKKSGFPMEVPTCNAVVGAYCRASKFQHAFKMVD-EMRKCKVGPNSRTYDVILHY 415
Query: 388 FSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHL 447
E+A+++ + M ++ C+P + T+ ++ G+ D L ++ M K L
Sbjct: 416 LIKSQKFEEAYNIFQRMG-IDGCEPQLNTYTMMVGMFCSNGRVDMAL-KVWKQMGEKGVL 473
Query: 448 SLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
+ ++ +I+GLC N+ E A + F+EM+ I P Q
Sbjct: 474 PC-MHMFSALINGLCFENRLEEACVYFQEMLDKGIRPPGQ 512
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 112/261 (42%), Gaps = 7/261 (2%)
Query: 85 QSLKQDHVCNAIQPSHYLVNKLIHRFKDDWK--SALGIFRWAGSCPGYEHSSEIYEMMVD 142
+++ Q+ + I+P LI F K A+ +F + G S +Y M+++
Sbjct: 286 KTMYQEMIDAGIRPDVVAYGMLISAFCKSGKCDEAIKVF-YEMEASGCMPSPHVYCMLIN 344
Query: 143 ILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEK 201
LG ++D+ E K G + + T V+ + A +++ A + DE+ +
Sbjct: 345 GLGSEERLDEALKYFEHYKKSGFPMEVPTCNAVVGAYCRASKFQHAFKMVDEMRKCKVGP 404
Query: 202 NTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWT 259
N+ T +++L L K K E A ++F + + C P +T+ + + +C RVD A
Sbjct: 405 NSRTYDVILHYLIKSQKFEEAYNIFQRMGIDGC-EPQLNTYTMMVGMFCSNGRVDMALKV 463
Query: 260 IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK 319
++M G PC+ +S +I C + + EM +G P ++ + L +
Sbjct: 464 WKQMGEKGVLPCMHMFSALINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEALVQ 523
Query: 320 SGDFEEAIRITEKMKIVGSKP 340
G A + K+ + P
Sbjct: 524 GGRISLAQEVALKLDAIRKTP 544
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 100/235 (42%), Gaps = 41/235 (17%)
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
+ +I++ + F V+ L++ M+ +G T+ ++ A++ +EA+ EKM
Sbjct: 163 GFHNLIEALGKIKQFRLVWSLVETMRCRGLLSKD-TFKLIVRRYARARKVKEAVETFEKM 221
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG-VAPDTSTFNTMITMFSHHG 392
I G K + +N LI TL ++ +V++A +Y+ EM G PD T+ ++ + H
Sbjct: 222 SIFGLKTELSDYNWLIDTLSKSKQVKKAQAIYK-EMKRKGKFVPDLKTYTVLMEGWGH-- 278
Query: 393 HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
EK +++ M + +++D + D+
Sbjct: 279 --EKDLLMVKTMYQ-----------------------------EMIDAGIRP-----DVV 302
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEK 507
Y ++I C++ KC+ A +F EM P ++++ + + D A K
Sbjct: 303 AYGMLISAFCKSGKCDEAIKVFYEMEASGCMPSPHVYCMLINGLGSEERLDEALK 357
>gi|242092396|ref|XP_002436688.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
gi|241914911|gb|EER88055.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
Length = 551
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 205/400 (51%), Gaps = 8/400 (2%)
Query: 90 DHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQ 149
D + A+ P LV +++ + AL FRWA G+ +++E + +++ LGK++Q
Sbjct: 123 DALGVAMSPE--LVAEVLKNLSNAGMLALAFFRWAERQEGFSYTAEGFHNLIEALGKIKQ 180
Query: 150 MDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLL 209
+ +L+E M +++ +T ++RR++ A + ++AV TF+++ FGL+ N L
Sbjct: 181 FKLVWSLVETMRCRGLLSKDTFKLIVRRYARARKVKEAVETFEKMSIFGLKTELSDYNWL 240
Query: 210 LDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG 267
+DTL K +V+ A++++ E+ K P+ T+ + + GW + + QEM G
Sbjct: 241 IDTLSKSKQVKKAQAIYKEMKRKGKFVPDLKTYTVLMEGWGHEKDLLMVKTMYQEMIDAG 300
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
P V++Y +I ++C+ + ++ EM+A GC P+ Y +++ L +EA+
Sbjct: 301 IRPDVVAYGMLISAFCKSGKCDEAIKVFYEMEASGCMPSPHVYCMLINGLGSEERLDEAL 360
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITM 387
+ E+ K G + N ++ RAS+ + A + EM E + P++ T++ ++
Sbjct: 361 KYFEQYKKSGFPMEVPTCNAVVGAYCRASKFEHAFKMVD-EMRECKIGPNSRTYDVILHY 419
Query: 388 FSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHL 447
E+A++V + M ++ C+P + T+ ++ G+ D L+ + M + L
Sbjct: 420 LIKSQKFEEAYNVFQRMG-MDGCEPQLNTYTMMVGMFCSNGRVDMALN-VWKQMGERGVL 477
Query: 448 SLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
+ ++ +I+GLC N+ E A + F+EM+ I P Q
Sbjct: 478 PC-MHMFSALINGLCFENRLEEACVYFQEMLDKGIRPPGQ 516
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 113/261 (43%), Gaps = 7/261 (2%)
Query: 85 QSLKQDHVCNAIQPSHYLVNKLIHRFKDDWK--SALGIFRWAGSCPGYEHSSEIYEMMVD 142
+++ Q+ + I+P LI F K A+ +F + G S +Y M+++
Sbjct: 290 KTMYQEMIDAGIRPDVVAYGMLISAFCKSGKCDEAIKVF-YEMEASGCMPSPHVYCMLIN 348
Query: 143 ILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEK 201
LG ++D+ E+ K G + + T V+ + A ++E A + DE+ +
Sbjct: 349 GLGSEERLDEALKYFEQYKKSGFPMEVPTCNAVVGAYCRASKFEHAFKMVDEMRECKIGP 408
Query: 202 NTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWT 259
N+ T +++L L K K E A +VF + + C P +T+ + + +C RVD A
Sbjct: 409 NSRTYDVILHYLIKSQKFEEAYNVFQRMGMDGC-EPQLNTYTMMVGMFCSNGRVDMALNV 467
Query: 260 IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK 319
++M G PC+ +S +I C + + EM +G P ++ + L +
Sbjct: 468 WKQMGERGVLPCMHMFSALINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEALVE 527
Query: 320 SGDFEEAIRITEKMKIVGSKP 340
G A + K+ + P
Sbjct: 528 GGRISLAQEMASKLDAIRKTP 548
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 102/229 (44%), Gaps = 5/229 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y M++ K + D+ + EM + G + + + ++ + ++A++ F++
Sbjct: 308 YGMLISAFCKSGKCDEAIKVFYEMEASGCMPSPHVYCMLINGLGSEERLDEALKYFEQYK 367
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVD 254
G T N ++ C+ K E A + E++ C I PN+ T+++ +H K + +
Sbjct: 368 KSGFPMEVPTCNAVVGAYCRASKFEHAFKMVDEMRECKIGPNSRTYDVILHYLIKSQKFE 427
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA Q M GC P + +Y+ ++ +C + +M +G P + ++ ++
Sbjct: 428 EAYNVFQRMGMDGCEPQLNTYTMMVGMFCSNGRVDMALNVWKQMGERGVLPCMHMFSALI 487
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL---GRASRVQE 360
+ L EEA ++M G +P + F+ L L GR S QE
Sbjct: 488 NGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEALVEGGRISLAQE 536
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 100/235 (42%), Gaps = 41/235 (17%)
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
+ +I++ + F V+ L++ M+ +G T+ ++ A++ +EA+ EKM
Sbjct: 167 GFHNLIEALGKIKQFKLVWSLVETMRCRGLLSKD-TFKLIVRRYARARKVKEAVETFEKM 225
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG-VAPDTSTFNTMITMFSHHG 392
I G K + +N LI TL ++ +V++A +Y+ EM G PD T+ ++ + H
Sbjct: 226 SIFGLKTELSDYNWLIDTLSKSKQVKKAQAIYK-EMKRKGKFVPDLKTYTVLMEGWGH-- 282
Query: 393 HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
EK +++ M + +++D + D+
Sbjct: 283 --EKDLLMVKTMYQ-----------------------------EMIDAGIRP-----DVV 306
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEK 507
Y ++I C++ KC+ A +F EM P ++++ + + D A K
Sbjct: 307 AYGMLISAFCKSGKCDEAIKVFYEMEASGCMPSPHVYCMLINGLGSEERLDEALK 361
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 182/376 (48%), Gaps = 9/376 (2%)
Query: 116 SALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIA--K 173
+A+ FRWAG G++H Y ++++L + Q A+ EEM K I NT +
Sbjct: 101 TAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAP-NTFSFNI 159
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC- 232
++R F+ + +DAV F+ + + + T +L+D LCK G E A VF E+ +
Sbjct: 160 LIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMG 219
Query: 233 -IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKV 291
+PP+ + K RV EA+ +M+ G P I+Y+T+I + + +
Sbjct: 220 FVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEA 279
Query: 292 YELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYT 351
++LD M A+ C P VTY +++ L K+G E A + M G +P+S + LI+
Sbjct: 280 LKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHG 339
Query: 352 LGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCK 411
++ R++EA ++ EM E G PD T MI G+ E+A EEM + CK
Sbjct: 340 FAKSGRMKEACSLFD-EMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMR-GGCK 397
Query: 412 PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAY 471
PNV T+ +++ K G+ +++ M+ H D TY ++ G C+ + + A
Sbjct: 398 PNVVTYTTIIQGLSKIGRVANAF-RIMKGMI-AHGCFPDSVTYICLLDGFCKLGRLDEAA 455
Query: 472 LLFKEMIGHDITPRYQ 487
L E+ +P Q
Sbjct: 456 QLLDELDKCSSSPNLQ 471
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 174/356 (48%), Gaps = 19/356 (5%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQWEDAVRTF 191
++ MV L K +++ + R + +M K + NT+ + + AG ++A++
Sbjct: 227 LHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAK---AGHAQEALKVL 283
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKI 250
D + T +L+++LCK G +E A +F + S PN+ + IHG+ K
Sbjct: 284 DNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKS 343
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
R+ EA EM G P VI+++ +I C+ NF + + +EM GC PNVVTY
Sbjct: 344 GRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTY 403
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
TT++ L+K G A RI + M G PDS + CL+ + R+ EA + E+
Sbjct: 404 TTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLD-ELD 462
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNK--LEHCKPNVQTFHPLLKSCFKTG 428
+ +P+ +++++ G E L E +K E+ P + ++ KTG
Sbjct: 463 KCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCC--SIIVGLCKTG 520
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRA--NKCEWAYLLFK--EMIGH 480
+ DE ++ MV++ D TTY ++I+GLCR+ N+ E A+ L EM+G+
Sbjct: 521 RLDEA-CRIFQRMVSE-GCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGY 574
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 115/460 (25%), Positives = 188/460 (40%), Gaps = 52/460 (11%)
Query: 94 NAIQPSHYLVNKLIHRFKDD--WKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMD 151
+ +P+ + LIH F K A +F GY + +M+D L K +
Sbjct: 324 SGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVE-AGYRPDVITHTVMIDGLCKSGNFE 382
Query: 152 QMRALLEEMSKG----HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN 207
Q EEM +G ++VT TI ++ S G+ +A R + G ++ T
Sbjct: 383 QAAKSFEEMMRGGCKPNVVTYTTI---IQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYI 439
Query: 208 LLLDTLCKEGKVELARSVFLELKSCIP-PNAHTFNIFIHGWC------------------ 248
LLD CK G+++ A + EL C PN ++ + G C
Sbjct: 440 CLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKA 499
Query: 249 ------------------KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCR--QYNF 288
K R+DEA Q M GC P +Y+ +I CR +
Sbjct: 500 AAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRV 559
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
+ + LL +++ G P+ VTYT + L K G+ + A+++ E+ G D + L
Sbjct: 560 ERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTAL 619
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
L +V AV ++Q EM G APD + + +I E A +EM
Sbjct: 620 CTGLCYQGQVDRAVSLFQ-EMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKG 678
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
KP V T+ L+++ G DE + + M+ + L + Y +IHG C+A K +
Sbjct: 679 Q-KPTVATYTALVQALCHAGNVDEAFHRF-EGMLARGELVGSVMIYDALIHGFCKALKVD 736
Query: 469 WAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
A LF++MI P T + D + + + A+++
Sbjct: 737 AALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQEL 776
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 176/370 (47%), Gaps = 8/370 (2%)
Query: 134 SEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
S Y ++D K+ ++D+ LL+E+ K L + +++ G E+ +
Sbjct: 435 SVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLF 494
Query: 193 ELGTFGLEKNTETMNL-LLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKI 250
E E + ++ LCK G+++ A +F + S P+A T+NI I+G C+
Sbjct: 495 EQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRS 554
Query: 251 --NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
NRV+ A + +++ G P ++Y+ + C+ + ++L+E ++G +VV
Sbjct: 555 RENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVV 614
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
YT + + L G + A+ + ++M G PD+ + C+I L + ++++A + E
Sbjct: 615 AYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFD-E 673
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M G P +T+ ++ H G+ ++AFH E M +V + L+ K
Sbjct: 674 MIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKAL 733
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
K D L +L +DM+++ ++ +T+ +L GL R+ K E A L +EM P T
Sbjct: 734 KVDAAL-KLFEDMISRGNVPTAVTSASL-FDGLVRSGKTEKAQELLQEMAAGGSPPHAAT 791
Query: 489 CRLILDEVKQ 498
ILD +++
Sbjct: 792 FTAILDGLRK 801
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 145/321 (45%), Gaps = 10/321 (3%)
Query: 171 IAKVMRRFSGAGQWEDAVRTFDELG-TFGLEKNTETMNLLLDTLCKEGKVELARSVFLE- 228
+A V+R G A+ F G G + + T N L++ L E ++ E
Sbjct: 89 VAAVLRSLKVTGT---AISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEM 145
Query: 229 LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
LK+ I PN +FNI I + + R D+A + MK C P + ++ ++ C+
Sbjct: 146 LKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMD 205
Query: 289 SKVYELLDEMQAQG-CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNC 347
K +E+ EM A G PP+ +T ++ L K+ +EA + +M+ G PD+ +N
Sbjct: 206 EKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNT 265
Query: 348 LIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKL 407
+I L +A QEA+ V M P T+ ++ G E+A + M
Sbjct: 266 MIDGLAKAGHAQEALKVLD-NMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAA- 323
Query: 408 EHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKC 467
+PN + L+ K+G+ E S L D+MV + D+ T+T++I GLC++
Sbjct: 324 SGFRPNSVIYTSLIHGFAKSGRMKEACS-LFDEMVEAGYRP-DVITHTVMIDGLCKSGNF 381
Query: 468 EWAYLLFKEMIGHDITPRYQT 488
E A F+EM+ P T
Sbjct: 382 EQAAKSFEEMMRGGCKPNVVT 402
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 87/187 (46%), Gaps = 3/187 (1%)
Query: 149 QMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN 207
Q+D+ +L +EM + G ++ + EDA + FDE+ G + T
Sbjct: 628 QVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYT 687
Query: 208 LLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKG 265
L+ LC G V+ A F + + + + ++ IHG+CK +VD A ++M
Sbjct: 688 ALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMIS 747
Query: 266 HGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEE 325
G P ++ +++ R K ELL EM A G PP+ T+T ++ L KS + +
Sbjct: 748 RGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGK 807
Query: 326 AIRITEK 332
+++ ++
Sbjct: 808 LLKLVQE 814
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 182/376 (48%), Gaps = 9/376 (2%)
Query: 116 SALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIA--K 173
+A+ FRWAG G++H Y ++++L + Q A+ EEM K I NT +
Sbjct: 101 TAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAP-NTFSFNI 159
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC- 232
++R F+ + +DAV F+ + + + T +L+D LCK G E A VF E+ +
Sbjct: 160 LIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMG 219
Query: 233 -IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKV 291
+PP+ + K RV EA+ +M+ G P I+Y+T+I + + +
Sbjct: 220 FVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEA 279
Query: 292 YELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYT 351
++LD M A+ C P VTY +++ L K+G E A + M G +P+S + LI+
Sbjct: 280 LKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHG 339
Query: 352 LGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCK 411
++ R++EA ++ EM E G PD T MI G+ E+A EEM + CK
Sbjct: 340 FAKSGRMKEACSLFD-EMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMR-GGCK 397
Query: 412 PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAY 471
PNV T+ +++ K G+ +++ M+ H D TY ++ G C+ + + A
Sbjct: 398 PNVVTYTTIIQGLSKIGRVANAF-RIMKGMI-AHGCFPDSVTYICLLDGFCKLGRLDEAA 455
Query: 472 LLFKEMIGHDITPRYQ 487
L E+ +P Q
Sbjct: 456 QLLDELDKCSSSPNLQ 471
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 170/354 (48%), Gaps = 23/354 (6%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQWEDAVRTF 191
++ MV L K +++ + R + +M K + NT+ + + AG ++A++
Sbjct: 227 LHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAK---AGHAQEALKVL 283
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKI 250
D + T +L+++LCK G +E A +F + S PN+ + IHG+ K
Sbjct: 284 DNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKS 343
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
R+ EA EM G P VI+++ +I C+ NF + + +EM GC PNVVTY
Sbjct: 344 GRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTY 403
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
TT++ L+K G A RI + M G PDS + CL+ + R+ EA + E+
Sbjct: 404 TTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLD-ELD 462
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP-----LLKSCF 425
+ +P+ +++++ G EK L E K +T P ++
Sbjct: 463 KCSSSPNLQLYSSLVNGLCDGGSVEKTLDDL-----FEQSKAAAETLDPGLCCSIIVGLC 517
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRA--NKCEWAYLLFKEM 477
KTG+ DE ++ MV++ D TTY ++I+GLCR+ N+ E A+ L ++
Sbjct: 518 KTGRLDEA-CRIFQRMVSE-GCKPDATTYNILINGLCRSRENRVERAFALLHDL 569
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 115/460 (25%), Positives = 189/460 (41%), Gaps = 52/460 (11%)
Query: 94 NAIQPSHYLVNKLIHRFKDD--WKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMD 151
+ +P+ + LIH F K A +F GY + +M+D L K +
Sbjct: 324 SGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVE-AGYRPDVITHTVMIDGLCKSGNFE 382
Query: 152 QMRALLEEMSKG----HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN 207
Q EEM +G ++VT TI ++ S G+ +A R + G ++ T
Sbjct: 383 QAAKSFEEMMRGGCKPNVVTYTTI---IQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYI 439
Query: 208 LLLDTLCKEGKVELARSVFLELKSCIP-PNAHTFNIFIHGWC------------------ 248
LLD CK G+++ A + EL C PN ++ ++G C
Sbjct: 440 CLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKA 499
Query: 249 ------------------KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCR--QYNF 288
K R+DEA Q M GC P +Y+ +I CR +
Sbjct: 500 AAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRV 559
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
+ + LL +++ G P+ VTYT + L K G+ + A+++ E+ G D + L
Sbjct: 560 ERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTAL 619
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
L +V AV ++Q EM G APD + + +I E A +EM
Sbjct: 620 CTGLCYQGQVDRAVSLFQ-EMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKG 678
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
KP V T+ L+++ G DE + + M+ + L + Y +IHG C+A K +
Sbjct: 679 Q-KPTVATYTALVQALCHAGNVDEAFHRF-ESMLARGELVGSVMIYDALIHGFCKALKVD 736
Query: 469 WAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
A LF++MI P T + D + + + A+++
Sbjct: 737 AALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQEL 776
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 181/375 (48%), Gaps = 18/375 (4%)
Query: 134 SEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
S Y ++D K+ ++D+ LL+E+ K L + ++ G E +T D
Sbjct: 435 SVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVE---KTLD 491
Query: 193 ELGTFGLEKNT-ETMN-----LLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIH 245
+L F K ET++ ++ LCK G+++ A +F + S P+A T+NI I+
Sbjct: 492 DL--FEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILIN 549
Query: 246 GWCKI--NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
G C+ NRV+ A + +++ G P ++Y+ + C+ + ++L+E ++G
Sbjct: 550 GLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGW 609
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
+VV YT + + L G + A+ + ++M G PD+ + C+I L + ++++A
Sbjct: 610 NADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACK 669
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
+ EM G P +T+ ++ H G+ ++AFH E M +V + L+
Sbjct: 670 FFD-EMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHG 728
Query: 424 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
K K D L +L +DM+++ ++ +T+ +L GL R+ K E A L +EM
Sbjct: 729 FCKALKVDAAL-KLFEDMISRGNVPTAVTSASL-FDGLVRSGKTEKAQELLQEMAAGGSP 786
Query: 484 PRYQTCRLILDEVKQ 498
P T ILD +++
Sbjct: 787 PHAATFTAILDGLRK 801
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 143/320 (44%), Gaps = 8/320 (2%)
Query: 171 IAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-L 229
+A V+R G R E G + + T N L++ L E ++ E L
Sbjct: 89 VAAVLRSLKVTGTAISFFRWAGEQA--GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEML 146
Query: 230 KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFS 289
K+ I PN +FNI I + + R D+A + MK C P + ++ ++ C+
Sbjct: 147 KAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDE 206
Query: 290 KVYELLDEMQAQG-CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
K +E+ EM A G PP+ +T ++ L K+ +EA + +M+ G PD+ +N +
Sbjct: 207 KAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTM 266
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
I L +A QEA+ V M P T+ ++ G E+A + M
Sbjct: 267 IDGLAKAGHAQEALKVLD-NMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAA-S 324
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
+PN + L+ K+G+ E S L D+MV + D+ T+T++I GLC++ E
Sbjct: 325 GFRPNSVIYTSLIHGFAKSGRMKEACS-LFDEMVEAGYRP-DVITHTVMIDGLCKSGNFE 382
Query: 469 WAYLLFKEMIGHDITPRYQT 488
A F+EM+ P T
Sbjct: 383 QAAKSFEEMMRGGCKPNVVT 402
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 90/194 (46%), Gaps = 17/194 (8%)
Query: 149 QMDQMRALLEEM--------SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLE 200
Q+D+ +L +EM + + +N + KV + EDA + FDE+ G +
Sbjct: 628 QVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKK-------LEDACKFFDEMIGKGQK 680
Query: 201 KNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVDEAQW 258
T L+ LC G V+ A F + + + + ++ IHG+CK +VD A
Sbjct: 681 PTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALK 740
Query: 259 TIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLA 318
++M G P ++ +++ R K ELL EM A G PP+ T+T ++ L
Sbjct: 741 LFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLR 800
Query: 319 KSGDFEEAIRITEK 332
KS + + +++ ++
Sbjct: 801 KSDESGKLLKLVQE 814
>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
Length = 584
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 168/317 (52%), Gaps = 7/317 (2%)
Query: 170 TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL 229
T ++R G G+ +A+ DE+ + T +LL+ CK + A + E+
Sbjct: 162 TCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEM 221
Query: 230 --KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYN 287
K C P + T+N+ ++G C+ RVD+A ++ + +GC P +SY+ +++ C
Sbjct: 222 RDKGCTP-DIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAER 280
Query: 288 FSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNC 347
+ EL+ EM +GCPPNVVT+ ++S+L + G E A+ + E++ G P+S +N
Sbjct: 281 WEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNP 340
Query: 348 LIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKL 407
L++ + ++ +A+ + M G PD ++NT++T G + A +L ++ K
Sbjct: 341 LLHAFCKQKKMDKAMAFLDL-MVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQL-KD 398
Query: 408 EHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKC 467
+ C P + +++ ++ K GKT E L +LL++MV+K L DI TY+ + GLCR ++
Sbjct: 399 KGCAPVLISYNTVIDGLTKAGKTKEAL-ELLNEMVSK-GLQPDIITYSTIAAGLCREDRI 456
Query: 468 EWAYLLFKEMIGHDITP 484
E A F ++ I P
Sbjct: 457 EDAIRAFGKVQDMGIRP 473
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 173/347 (49%), Gaps = 12/347 (3%)
Query: 169 NTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE 228
T A ++++ S +G+ +A R G + N ++ C G+V+ AR E
Sbjct: 99 GTCAALIKKLSASGRTAEARRVLAACG-----PDVMAYNAMMAGYCGAGQVDAARRWCAE 153
Query: 229 LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
+ +A+T + I G C R A + EM C P V++Y+ ++++ C++ +
Sbjct: 154 --RAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGY 211
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
+ +LLDEM+ +GC P++VTY V++ + + G ++AI + + G +P++ +N +
Sbjct: 212 KQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIV 271
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
+ L A R ++A + EM + G P+ TFN +I+ G E A VLE++ K
Sbjct: 272 LKGLCTAERWEDAEELMG-EMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKY- 329
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
C PN +++PLL + K K D+ ++ LD MV++ DI +Y ++ LCR+ + +
Sbjct: 330 GCSPNSLSYNPLLHAFCKQKKMDKAMA-FLDLMVSRGCYP-DIVSYNTLLTALCRSGEVD 387
Query: 469 WAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEAVMKK 514
A L ++ P + ++D + K +A E + ++ K
Sbjct: 388 VAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSK 434
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 169/344 (49%), Gaps = 8/344 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++++ K Q LL+EM KG + T V+ G+ +DA+ L
Sbjct: 198 YTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLP 257
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRV 253
++G E NT + N++L LC + E A + E+ K C PPN TFN+ I C+ V
Sbjct: 258 SYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGC-PPNVVTFNMLISFLCRKGLV 316
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
+ A ++++ +GC P +SY+ ++ ++C+Q K LD M ++GC P++V+Y T+
Sbjct: 317 EPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTL 376
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
++ L +SG+ + A+ + ++K G P +N +I L +A + +EA+ + EM G
Sbjct: 377 LTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLN-EMVSKG 435
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
+ PD T++T+ E A ++ + +PN ++ ++ K +T
Sbjct: 436 LQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDM-GIRPNTVLYNAIILGLCKRRETHSA 494
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
+ L M+ + + +TYT++I GL + A L E+
Sbjct: 495 I-DLFAYMIGNGCMP-NESTYTILIEGLAYEGLIKEARDLLDEL 536
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 177/371 (47%), Gaps = 13/371 (3%)
Query: 143 ILGKVRQMDQMRALLEEMSKGH----IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
+ G+ R + + A+L+EM + +VT + + + SG ++ A++ DE+ G
Sbjct: 170 LCGRGRTANAL-AVLDEMLRRRCVPDVVTYTILLEATCKRSG---YKQAMKLLDEMRDKG 225
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQ 257
+ T N++++ +C+EG+V+ A L S PN ++NI + G C R ++A+
Sbjct: 226 CTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAE 285
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
+ EM GC P V++++ +I CR+ E+L+++ GC PN ++Y ++
Sbjct: 286 ELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAF 345
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
K ++A+ + M G PD +N L+ L R+ V AV + ++ + G AP
Sbjct: 346 CKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLH-QLKDKGCAPV 404
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
++NT+I + G ++A +L EM + +P++ T+ + + + ++ +
Sbjct: 405 LISYNTVIDGLTKAGKTKEALELLNEMVS-KGLQPDIITYSTIAAGLCREDRIEDAIRAF 463
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVK 497
V + + Y +I GLC+ + A LF MIG+ P T ++++ +
Sbjct: 464 --GKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLA 521
Query: 498 QKHMYDAAEKI 508
+ + A +
Sbjct: 522 YEGLIKEARDL 532
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 148/283 (52%), Gaps = 13/283 (4%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KG---HIVTLNTIAKVMRRFSGAGQW 184
G E ++ Y +++ L + + L+ EM KG ++VT N + + R G
Sbjct: 260 GCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCR---KGLV 316
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL---KSCIPPNAHTFN 241
E A+ +++ +G N+ + N LL CK+ K++ A + FL+L + C P + ++N
Sbjct: 317 EPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMA-FLDLMVSRGCYP-DIVSYN 374
Query: 242 IFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ 301
+ C+ VD A + ++K GC P +ISY+T+I + + ELL+EM ++
Sbjct: 375 TLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSK 434
Query: 302 GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
G P+++TY+T+ + L + E+AIR K++ +G +P++ +N +I L + A
Sbjct: 435 GLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSA 494
Query: 362 VYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
+ ++ M NG P+ ST+ +I ++ G ++A +L+E+
Sbjct: 495 IDLFAY-MIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDEL 536
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 2/168 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ L + ++D LL ++ KG L + V+ + AG+ ++A+ +E+
Sbjct: 373 YNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMV 432
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVD 254
+ GL+ + T + + LC+E ++E A F +++ I PN +N I G CK
Sbjct: 433 SKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETH 492
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
A M G+GC P +Y+ +I+ + + +LLDE+ ++G
Sbjct: 493 SAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG 540
>gi|147801213|emb|CAN73209.1| hypothetical protein VITISV_002838 [Vitis vinifera]
Length = 1024
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 191/393 (48%), Gaps = 33/393 (8%)
Query: 117 ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMR 176
AL FRW G+ H+ + Y +M++ILG+ R ++ R N + + +
Sbjct: 204 ALHFFRWV-EAKGFTHNEQSYFLMIEILGRSRNLNAAR--------------NFVFSIEK 248
Query: 177 RFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC--IP 234
+ GA ++++ F + G+ + T N LL + K G+ +A+ +F E+ +
Sbjct: 249 KSGGA----ESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVT 304
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYEL 294
P+ +TFNI I G+C + VDE W +EM C P V++Y+T++ CR + +
Sbjct: 305 PDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNV 364
Query: 295 LDEM--QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
+ M ++ PNVVTYTT++ D EA+ + +M G KP+ +N LI L
Sbjct: 365 VKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGL 424
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
A ++ + + + + + G PDT T NT+I G E+AF V E+M++L +P
Sbjct: 425 CEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSEL-RVQP 483
Query: 413 NVQTFHPLLKSCFKTG---KTDECLSQLLDDMVNKHHLSLD--ITTYTLVIHGLCRANKC 467
+ T+ L++S + G + +E +L + + H + + Y + LC K
Sbjct: 484 DSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKT 543
Query: 468 EWAYLLFKEMI--GHDITPRYQTCRLILDEVKQ 498
+ A +F++++ G P Y+T LIL ++
Sbjct: 544 KKAERVFRQLMKRGTQDPPSYKT--LILGHCRE 574
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 113/253 (44%), Gaps = 19/253 (7%)
Query: 273 ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE-------- 324
+S +T++Q+ +K ++A+G N +Y ++ L +S +
Sbjct: 186 LSKTTVLQTLQLIRTPAKALHFFRWVEAKGFTHNEQSYFLMIEILGRSRNLNAARNFVFS 245
Query: 325 --------EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
E+I++ + MK +G P FN L+ + + R A ++ + GV P
Sbjct: 246 IEKKSGGAESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTP 305
Query: 377 DTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQ 436
DT TFN +I F + ++ F +EM++ + C P+V T++ L+ + GK +
Sbjct: 306 DTYTFNILIRGFCMNSMVDEGFWFFKEMSRFK-CDPDVVTYNTLVDGLCRAGKV-KIAHN 363
Query: 437 LLDDMVNKH-HLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE 495
++ MV K +LS ++ TYT +I G C A L EM+ + P T ++
Sbjct: 364 VVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQG 423
Query: 496 VKQKHMYDAAEKI 508
+ + D ++I
Sbjct: 424 LCEAQKLDKIKEI 436
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 166/393 (42%), Gaps = 38/393 (9%)
Query: 110 FKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM--SKGHIVT 167
K D AL + S G + + Y ++ L + +++D+++ +LE M G I
Sbjct: 391 MKQDMAEALSLLAEMVS-RGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPD 449
Query: 168 LNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFL 227
T+ +++ G+ E+A F+++ ++ ++ T ++L+ +LC+ G A F
Sbjct: 450 TCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFD 509
Query: 228 ELK---------SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTI 278
EL C P A +N C + +A+ +++ G SY T+
Sbjct: 510 ELAEKEILLHDVGCKPLVA-AYNPMFEYLCSNGKTKKAERVFRQLMKRGTQDPP-SYKTL 567
Query: 279 IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
I +CR+ ++LL M + P+ TY ++ L K GD A + EKM
Sbjct: 568 ILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSH 627
Query: 339 KPDSRFFNCLIYTL-GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKA 397
P + F+ ++ L + R+++ + D ST + + G +KA
Sbjct: 628 LPTTAIFHSILAALVEKERRIRQNI--------------DLSTHT--VRLLYKSGLQDKA 671
Query: 398 FHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLV 457
F + L + + L+ ++ K E LL + + S+DI + V
Sbjct: 672 FMTI----GLLYENGYLVKMEELVSFLCQSRKLLEAQKMLLFSLEKRQ--SVDIDMCSTV 725
Query: 458 IHGLCRANKCEWAYLLFKEMIGHDITPRYQTCR 490
I GLC+A+K A+ L+ E++ + R TC+
Sbjct: 726 ISGLCKAHKVSEAFALYYELVEKGMQHRL-TCQ 757
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 116/424 (27%), Positives = 193/424 (45%), Gaps = 54/424 (12%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK----GHIVTLNTIAKVMRRFSGAGQW 184
G E + Y ++D L K + D+ + L E M +VT NT+ + R G+
Sbjct: 5 GCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFR---TGKL 61
Query: 185 EDAVRTFDELGTFGLEKNTE---TMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFN 241
E A+ F E+ L++ + + N+L+ LC+ GK+E A F ++ PN T++
Sbjct: 62 ERAMALFQEM----LDRRSHDVISFNILVTGLCRAGKIETALEFFRKMDDRCSPNVITYS 117
Query: 242 IFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM--- 298
+ I G CK NRV +A ++ MK GC P VI+Y+ ++ C++ + +E+L EM
Sbjct: 118 VLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDA 177
Query: 299 --------------------------------QAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
+GC PNVVTY T++ L K G ++A
Sbjct: 178 GCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDA 237
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
+ M G PD +N LI L +A +V E++ + + + G+ PD T++++I
Sbjct: 238 CAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAV-SGGIKPDVVTYSSVIY 296
Query: 387 MFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHH 446
++A +L + K C P+V + L+ K GK DE L +++
Sbjct: 297 GLCRSNRLDEACRLLLYV-KSRGCPPDVILYSTLIDGLCKAGKVDEAFD--LYEVMTGDG 353
Query: 447 LSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCR-LILDEVKQKHMYDAA 505
D+ TY+ +I GLC+A + + A+LL M+ P T LI H+ +A
Sbjct: 354 CDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAI 413
Query: 506 EKIE 509
E +E
Sbjct: 414 ELVE 417
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 173/365 (47%), Gaps = 42/365 (11%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++VD L K ++ +L EM G + L T ++ A + DA+ ++
Sbjct: 151 YTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMT 210
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
G N T L+D LCK G+V+ A ++ ++ P+ +N+ I+G CK ++VD
Sbjct: 211 CRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVD 270
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
E+ ++ G P V++YS++I CR + LL ++++GCPP+V+ Y+T++
Sbjct: 271 ESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLI 330
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
L K+G +EA + E M G D ++ LI L +A RV EA ++ M G
Sbjct: 331 DGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEA-HLLLARMVRMGT 389
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
P T T+N++I H ++A ++EEM + +C P+
Sbjct: 390 PPSTMTYNSLIKGLCDLNHLDEAIELVEEMER-SNCAPSA-------------------- 428
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL-LFKEMIGHDITPRYQTCRLIL 493
TY ++IHG+CR + + A L F+EMI + + P + T ++L
Sbjct: 429 -----------------VTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILL 471
Query: 494 DEVKQ 498
+ +K+
Sbjct: 472 EGLKK 476
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 150/317 (47%), Gaps = 6/317 (1%)
Query: 98 PSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRA 155
P+ N L+H AL + R +C G + Y ++D L KV ++ A
Sbjct: 181 PNLVTYNSLLHGLCRARRVSDALALMRDM-TCRGCTPNVVTYGTLIDGLCKVGRVKDACA 239
Query: 156 LLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLC 214
+L +M KG L ++ A Q ++++ + G++ + T + ++ LC
Sbjct: 240 MLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLC 299
Query: 215 KEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI 273
+ +++ A + L +KS PP+ ++ I G CK +VDEA + M G GC V+
Sbjct: 300 RSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVV 359
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
+YST+I C+ + + LL M G PP+ +TY +++ L +EAI + E+M
Sbjct: 360 TYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEM 419
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
+ P + +N LI+ + R RV A Y EM +NGV PD T++ ++
Sbjct: 420 ERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGLKKSKD 479
Query: 394 -HEKAFHVLEEMNKLEH 409
HE VL++M +L +
Sbjct: 480 LHELRHLVLDQMVQLGY 496
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 126/256 (49%), Gaps = 13/256 (5%)
Query: 263 MKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGD 322
M+ HGC P V++Y+++I C+ + EL + M++ C P++VTY T++ L ++G
Sbjct: 1 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60
Query: 323 FEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFN 382
E A+ + ++M + D FN L+ L RA +++ A+ ++ ++ +P+ T++
Sbjct: 61 LERAMALFQEM-LDRRSHDVISFNILVTGLCRAGKIETALEFFR--KMDDRCSPNVITYS 117
Query: 383 TMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD---ECLSQLLD 439
+I +A +LE M K C P+V T+ L+ K K E L ++LD
Sbjct: 118 VLIDGLCKANRVSQAVELLESM-KARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLD 176
Query: 440 DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQ 498
++ TY ++HGLCRA + A L ++M TP T ++D + K
Sbjct: 177 -----AGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKV 231
Query: 499 KHMYDAAEKIEAVMKK 514
+ DA + ++ K
Sbjct: 232 GRVKDACAMLADMIDK 247
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 110/418 (26%), Positives = 196/418 (46%), Gaps = 41/418 (9%)
Query: 134 SEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAK-VMRRFSGAGQWEDAVRTFD 192
S Y +++ K R Q LL+EM K IV N + +++ G+ + A+ +
Sbjct: 33 SITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYR 92
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE--LKSCIPPNAHTFNIFIHGWCKI 250
++ + T +L+D LCK ++ A S+ LE +++ PN T+N I+G+CK+
Sbjct: 93 DMQRH-CAPSVITYTILVDALCKSARISDA-SLILEDMIEAGCAPNVVTYNTLINGFCKL 150
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
+DEA +M + C P V +Y+ +I YC+Q +LL EM GC PN +TY
Sbjct: 151 GNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITY 210
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
T+M L KSG + +A + + M KP FN +I + ++ A ++Q+ M
Sbjct: 211 NTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQL-MT 269
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKT 430
+ G PD T+N MI+ + A +LE M + C P+V T++ ++ K +
Sbjct: 270 DRGCLPDIYTYNIMISGACRANRIDDARQLLERMTE-AGCPPDVVTYNSIVSGLCKASQV 328
Query: 431 DE---------------------------CLSQLLDDM------VNKHHLSLDITTYTLV 457
DE C S+ LDD + ++ + D+ YT++
Sbjct: 329 DEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTIL 388
Query: 458 IHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEAVMKK 514
IHG C+A++ + + F EM+ P T +++D++ K + D ++ ++++
Sbjct: 389 IHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLER 446
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 151/342 (44%), Gaps = 39/342 (11%)
Query: 207 NLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKG 265
N LL ++ K + A +F L P++ T++ I+G+CK +A + EM+
Sbjct: 2 NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61
Query: 266 HG----------------------------------CHPCVISYSTIIQSYCRQYNFSKV 291
G C P VI+Y+ ++ + C+ S
Sbjct: 62 RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRHCAPSVITYTILVDALCKSARISDA 121
Query: 292 YELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYT 351
+L++M GC PNVVTY T+++ K G+ +EA+ + +M PD +N LI
Sbjct: 122 SLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDG 181
Query: 352 LGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCK 411
+ R Q+ + Q EM + G P+ T+NT++ G + AF+ L +M CK
Sbjct: 182 YCKQERPQDGAKLLQ-EMVKYGCEPNFITYNTLMDSLVKSGKYIDAFN-LAQMMLRRDCK 239
Query: 412 PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAY 471
P+ TF+ ++ K G+ D L+ L ++ DI TY ++I G CRAN+ + A
Sbjct: 240 PSHFTFNLMIDMFCKVGQLD--LAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDAR 297
Query: 472 LLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
L + M P T I+ + + D A ++ V++
Sbjct: 298 QLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLR 339
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 97/198 (48%), Gaps = 2/198 (1%)
Query: 178 FSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPN 236
F GQ + A F + G + T N+++ C+ +++ AR + + ++ PP+
Sbjct: 252 FCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPD 311
Query: 237 AHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLD 296
T+N + G CK ++VDEA + ++ G V++ ST+I C+ +LL
Sbjct: 312 VVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLR 371
Query: 297 EMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRAS 356
EM+ G P+VV YT ++ K+ ++++ +M G P ++ +I L +++
Sbjct: 372 EMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSA 431
Query: 357 RVQEAVYVYQVEMPENGV 374
RV++ + + M E GV
Sbjct: 432 RVRDGCMLLKT-MLERGV 448
>gi|356542070|ref|XP_003539494.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Glycine max]
Length = 729
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 120/454 (26%), Positives = 207/454 (45%), Gaps = 52/454 (11%)
Query: 109 RFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALL---EEMSKGHI 165
R D AL F+W G+ H+ E Y +M++ILG+ R ++ R L E+ SKG +
Sbjct: 86 RLIKDPSKALRFFKWTQQ-KGFSHTPESYFIMLEILGRERNLNVARNFLFSIEKHSKGTV 144
Query: 166 -VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARS 224
+ ++R ++ AG ++++++ F + + + + T N L+ L K G+ +A+
Sbjct: 145 KLEDRFFNSLIRSYAEAGLFKESMKLFQTMKSIAVSPSVVTFNSLMSILLKRGRTNMAKE 204
Query: 225 VFLELKSC--IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSY 282
V+ E+ + P+ T+N+ I G+CK + VDE +EM+ C V++Y+T++
Sbjct: 205 VYDEMLGTYGVSPDTCTYNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGL 264
Query: 283 CRQYNFSKVYELLDEM--QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
CR L++ M + +G PNVVTYTT++ + EEA+ + E+M G KP
Sbjct: 265 CRAGKVRIARNLVNGMGKKCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKP 324
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
+ +N L+ L A ++ + V + + G +PDT TFNT+I + G+ ++A V
Sbjct: 325 NMITYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAGNLDEALKV 384
Query: 401 LEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHL------------- 447
E M K + ++ L++S + G D QL D++ K L
Sbjct: 385 FESMKKF-RIPADSASYSTLIRSLCQKGDYDMA-EQLFDELFEKEILLSKFGSKPLAASY 442
Query: 448 ---------------------------SLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH 480
+ D +YT VI G C+ E Y L M+
Sbjct: 443 NPIFESLCEHGKTKKAERVIRQLMKRGTQDPQSYTTVIMGHCKEGAYESGYELLMWMLRR 502
Query: 481 DITPRYQTCRLILDEVKQKHM-YDAAEKIEAVMK 513
D P + ++D QK A E +E ++K
Sbjct: 503 DFLPDIEIYDYLIDGFLQKDKPLLAKETLEKMLK 536
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 91/405 (22%), Positives = 176/405 (43%), Gaps = 27/405 (6%)
Query: 93 CNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQM 150
C + P+ LI + K + + AL + S G + + Y +V L + ++
Sbjct: 284 CEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTS-RGLKPNMITYNTLVKGLCEAHKL 342
Query: 151 DQMRALLEEM-SKGHI----VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTET 205
D+M+ +LE M S G T NTI + AG ++A++ F+ + F + ++ +
Sbjct: 343 DKMKDVLERMKSDGGFSPDTFTFNTIIHL---HCCAGNLDEALKVFESMKKFRIPADSAS 399
Query: 206 MNLLLDTLCKEGKVELARSVFLEL--------KSCIPPNAHTFNIFIHGWCKINRVDEAQ 257
+ L+ +LC++G ++A +F EL K P A ++N C+ + +A+
Sbjct: 400 YSTLIRSLCQKGDYDMAEQLFDELFEKEILLSKFGSKPLAASYNPIFESLCEHGKTKKAE 459
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
I+++ G SY+T+I +C++ + YELL M + P++ Y ++
Sbjct: 460 RVIRQLMKRGTQDPQ-SYTTVIMGHCKEGAYESGYELLMWMLRRDFLPDIEIYDYLIDGF 518
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
+ A EKM +P + ++ ++ L E+ V V M E V +
Sbjct: 519 LQKDKPLLAKETLEKMLKSSYQPKTSTWHSVLAKLLEKGCAHESSCVI-VMMLEKNVRQN 577
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
+ + + HE+AF ++ + K + + LLK GK E L
Sbjct: 578 INLSTESLQLLFGREQHERAFEIINLLYKNGYYVKIEEVAQFLLKR----GKLSEACKLL 633
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
L + N ++ +D+ T++ LC+ NK A+ L E++ + +
Sbjct: 634 LFSLENHQNVDIDLCNATIL--NLCKINKVSEAFSLCYELVENGL 676
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/375 (28%), Positives = 192/375 (51%), Gaps = 7/375 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +++D K ++D+ L EEM S G ++ T ++ F + ++A+ F +
Sbjct: 46 YNILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMA 105
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLE--LKSCIPPNAHTFNIFIHGWCKINRV 253
G E + T + ++ LCK GKV A + ++ N +N I+G CK +
Sbjct: 106 EKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENI 165
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
+ A ++EM G P I+Y+TI+ CR S+ + D M ++G P+VV Y +
Sbjct: 166 ERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGL 225
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
+ L K G +EA+++ + + G PD+ +N ++ L R S + EA +++ +M +G
Sbjct: 226 LDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFK-KMVASG 284
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
AP+ +T++ +++ + A VLEEM+K+ P+V T++ LL KT D+
Sbjct: 285 CAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAV-PDVVTYNILLDGLCKTNLVDKA 343
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
+L MV+ + + DI +Y++V++GLC+ NK A +LF MI + P T +++
Sbjct: 344 -HELFSTMVD-NGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILM 401
Query: 494 DEVKQKHMYDAAEKI 508
D + + D A+ +
Sbjct: 402 DGLCKAGKLDEAKDL 416
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 161/316 (50%), Gaps = 6/316 (1%)
Query: 202 NTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTI 260
N T ++L + CK+GK+ +F + L + I P+ +NI I G+ K RVDEA
Sbjct: 7 NRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLY 66
Query: 261 QEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKS 320
+EM G P + +Y++++ ++C++ + EL M +G P+VVTY+T++S L K+
Sbjct: 67 EEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKT 126
Query: 321 GDFEEAIRIT-EKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTS 379
G EA+ + KM G ++ +N LI L + ++ A Y EM G PD
Sbjct: 127 GKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERA-YKLLEEMASKGYVPDNI 185
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLD 439
T+NT+++ G +A + M + P+V ++ LL + +K GKTDE + +L
Sbjct: 186 TYNTILSGLCRMGKVSEAKQFFDSMPSRGY-SPDVVAYNGLLDALYKEGKTDEAM-KLFK 243
Query: 440 DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQK 499
D++ K ++ D TY ++ GL R + + A +FK+M+ P T ++L +
Sbjct: 244 DVIAKGYMP-DTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRA 302
Query: 500 HMYDAAEKIEAVMKKL 515
D A K+ M K+
Sbjct: 303 KKVDDAHKVLEEMSKI 318
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 173/345 (50%), Gaps = 6/345 (1%)
Query: 170 TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL 229
T V++ F G+ D + F+++ G+ + N+L+D K+G+V+ A ++ E+
Sbjct: 10 TFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEM 69
Query: 230 KSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
S + P+ +T+N ++ +CK ++ EA + M G P V++YSTII C+
Sbjct: 70 VSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKV 129
Query: 289 SKVYELL-DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNC 347
++ E+L +M +GC N V Y +++ L K + E A ++ E+M G PD+ +N
Sbjct: 130 TEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNT 189
Query: 348 LIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKL 407
++ L R +V EA + MP G +PD +N ++ G ++A + +++
Sbjct: 190 ILSGLCRMGKVSEAKQFFD-SMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAK 248
Query: 408 EHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKC 467
+ P+ T++ +L + DE ++ MV + + TY++V+ G CRA K
Sbjct: 249 GYM-PDTVTYNSILLGLARKSNMDEA-EEMFKKMV-ASGCAPNGATYSIVLSGHCRAKKV 305
Query: 468 EWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
+ A+ + +EM P T ++LD + + ++ D A ++ + M
Sbjct: 306 DDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTM 350
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 121/254 (47%), Gaps = 9/254 (3%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEE-MSKGHI---VTLNTIAKVMRRFSGAGQW 184
GY Y ++D L K + D+ L ++ ++KG++ VT N+I + R S
Sbjct: 214 GYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKS---NM 270
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIF 243
++A F ++ G N T +++L C+ KV+ A V E+ K P+ T+NI
Sbjct: 271 DEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNIL 330
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
+ G CK N VD+A M +GC P ++SYS ++ C+ L D M +
Sbjct: 331 LDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKL 390
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
P+VVT+ +M L K+G +EA + ++M G PD +N L+ L + R +A
Sbjct: 391 VPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADR 450
Query: 364 VYQVEMPENGVAPD 377
+ Q M E G D
Sbjct: 451 LTQA-MKEKGFLSD 463
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 115/241 (47%), Gaps = 3/241 (1%)
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
C P ++ +++S+C+Q Y+L ++M G P+ + Y ++ AK G +EA
Sbjct: 4 CSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEAN 63
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITM 387
R+ E+M VG +P +N L+ + ++++EA+ +++ M E G PD T++T+I+
Sbjct: 64 RLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKT-MAEKGFEPDVVTYSTIISG 122
Query: 388 FSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHL 447
G +A +L C N ++ L+ K + +LL++M +K ++
Sbjct: 123 LCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAY-KLLEEMASKGYV 181
Query: 448 SLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEK 507
D TY ++ GLCR K A F M +P +LD + ++ D A K
Sbjct: 182 P-DNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMK 240
Query: 508 I 508
+
Sbjct: 241 L 241
Score = 42.0 bits (97), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 9/112 (8%)
Query: 407 LEHCKPNVQTFHPLLKSCFKTGKTDE---CLSQLLDDMVNKHHLSLDITTYTLVIHGLCR 463
+ C PN TF +LKS K GK + Q+LD + +S D Y ++I G +
Sbjct: 1 MRECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLD-----NGISPDGIEYNILIDGYAK 55
Query: 464 ANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEAVMKK 514
+ + A L++EM+ + P T +L+ K+ M +A E + + +K
Sbjct: 56 KGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEK 107
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/383 (27%), Positives = 190/383 (49%), Gaps = 12/383 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM----SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++D L K + +D+ +L+ M K I T N + + + G+W++ VR +
Sbjct: 307 YNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCL---IHGYLSTGEWKEVVRRLE 363
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFL-ELKSCIPPNAHTFNIFIHGWCKIN 251
E+ GL+ + T +LLLD LCK GK AR +F ++ I PN + I +HG+
Sbjct: 364 EMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARG 423
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
+ + + M +G P ++ ++ +Y ++ + + M G P+VVTY
Sbjct: 424 AIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYG 483
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
++ L K G ++A+ +M G P+S FN L+Y L R ++A ++ EM +
Sbjct: 484 ILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELF-FEMWD 542
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
GV P+ FNT++ + G A +++ M ++ +PNV +++ L+ G+TD
Sbjct: 543 QGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERV-GVRPNVISYNTLIGGHCLAGRTD 601
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRL 491
E +QLLD MV+ L D+ +Y ++ G C+ + + AY LF+EM+ +TP T
Sbjct: 602 EA-AQLLDVMVSVG-LKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYST 659
Query: 492 ILDEVKQKHMYDAAEKIEAVMKK 514
IL + + A+++ M K
Sbjct: 660 ILQGLFHTRRFSEAKELYLNMIK 682
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/403 (25%), Positives = 184/403 (45%), Gaps = 9/403 (2%)
Query: 96 IQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQM 153
++P N LIH + +WK + + G + Y +++D L K + +
Sbjct: 335 VKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYA-RGLDPDVVTYSLLLDYLCKNGKCTEA 393
Query: 154 RALLEEMSKGHIVTLNTIAKVM-RRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDT 212
R + M + I TI ++ ++ G D D + G+ N N++L
Sbjct: 394 RKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCA 453
Query: 213 LCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPC 271
K+ ++ A +F + + P+ T+ I I CK+ RVD+A +M G P
Sbjct: 454 YAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPN 513
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
+ +++++ C + K EL EM QG PNVV + T+M L G A R+ +
Sbjct: 514 SVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLID 573
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHH 391
M+ VG +P+ +N LI A R EA + V M G+ PD +++T++ +
Sbjct: 574 SMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDV-MVSVGLKPDLISYDTLLRGYCKT 632
Query: 392 GHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDI 451
G + A+ + EM + + P T+ +L+ F T + E +L +M+ K DI
Sbjct: 633 GRIDNAYCLFREMLR-KGVTPGAVTYSTILQGLFHTRRFSEA-KELYLNMI-KSGQQWDI 689
Query: 452 TTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
TY ++++GLC+ N + A+ +F+ + D+ P T +++D
Sbjct: 690 YTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMID 732
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 97/323 (30%), Positives = 146/323 (45%), Gaps = 10/323 (3%)
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-----SCIPPNAHTFNIFIHGWCKIN 251
FG N + N LL LC E +VE A + + +C PN T+N I G CK
Sbjct: 155 FGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNC-TPNVVTYNTIIDGLCKAQ 213
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
VD A+ +Q M G V++YSTII C+ + +L M +G P+VVTY
Sbjct: 214 AVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYN 273
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
T++ L K+ + A + + M G KPD +N +I L +A V A V Q M +
Sbjct: 274 TIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQ-HMID 332
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
V PD T+N +I + G ++ LEEM P+V T+ LL K GK
Sbjct: 333 KDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYA-RGLDPDVVTYSLLLDYLCKNGKCT 391
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRL 491
E ++ M+ K + ++T Y +++HG L M+ + I+P +
Sbjct: 392 EA-RKIFYCMIRK-GIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNI 449
Query: 492 ILDEVKQKHMYDAAEKIEAVMKK 514
+L +K M D A I + M +
Sbjct: 450 VLCAYAKKAMIDEAMHIFSRMSQ 472
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 156/346 (45%), Gaps = 9/346 (2%)
Query: 92 VCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQ 149
V N I P++Y+ N ++ + K A+ IF S G Y +++D L K+ +
Sbjct: 436 VANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRM-SQHGLSPDVVTYGILIDALCKLGR 494
Query: 150 MDQMRALLEEMSKGHIVTLNTIA--KVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN 207
+D +M VT N++ ++ +WE A F E+ G+ N N
Sbjct: 495 VDDAVLKFNQMINDG-VTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFN 553
Query: 208 LLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
++ LC EG+V +A+ + ++ + PN ++N I G C R DEA + M
Sbjct: 554 TIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSV 613
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
G P +ISY T+++ YC+ Y L EM +G P VTY+T++ L + F EA
Sbjct: 614 GLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEA 673
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
+ M G + D +N ++ L + + V EA ++Q + + P+ TF MI
Sbjct: 674 KELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQ-SLCSKDLRPNIITFTIMID 732
Query: 387 MFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
+ G + A + + PNV T+ ++K+ + G DE
Sbjct: 733 VLFKGGRKKDAMDLFASIPS-HGLVPNVVTYCIMMKNIIQEGLLDE 777
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 159/390 (40%), Gaps = 85/390 (21%)
Query: 176 RRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTL---------------------- 213
R SG+ +DA++ FDEL + N LL+ +
Sbjct: 22 RARSGSLGIDDALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARA 81
Query: 214 -------------------CKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRV 253
C+ G++E + F L LK+ N N ++G C RV
Sbjct: 82 CSNKVRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRV 141
Query: 254 DEA-QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG---CPPNVVT 309
DEA ++ M GC P V+S +T+++ C + + ELL M G C PNVVT
Sbjct: 142 DEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVT 201
Query: 310 YTTVMSYLAKS-------GDFEEAIRITEKMKIV-------------------------- 336
Y T++ L K+ G + I K+ +V
Sbjct: 202 YNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMI 261
Query: 337 --GSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHH 394
G KPD +N +I L +A V A V Q M + GV PD T+NT+I
Sbjct: 262 DKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQ-HMIDKGVKPDVVTYNTIIDGLCKAQAV 320
Query: 395 EKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTY 454
++A VL+ M + KP++QT++ L+ TG+ E + +L + + L D+ TY
Sbjct: 321 DRADGVLQHMID-KDVKPDIQTYNCLIHGYLSTGEWKEVVRRL--EEMYARGLDPDVVTY 377
Query: 455 TLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
+L++ LC+ KC A +F MI I P
Sbjct: 378 SLLLDYLCKNGKCTEARKIFYCMIRKGIKP 407
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 96/414 (23%), Positives = 182/414 (43%), Gaps = 76/414 (18%)
Query: 49 ARLDHHQVLCVDSPRLPDIDVIISKV-HVGSSEDEVFQSLKQDHVCN-AIQPSHYLVNKL 106
+R+ H + SP + ++I + +G +D V LK + + N + P+ + N L
Sbjct: 468 SRMSQHGL----SPDVVTYGILIDALCKLGRVDDAV---LKFNQMINDGVTPNSVVFNSL 520
Query: 107 IHRF--KDDWKSALGIF--RW-AGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS 161
++ D W+ A +F W G P + I M ++ + + M R L++ M
Sbjct: 521 VYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTI---MCNLCNEGQVMVAQR-LIDSME 576
Query: 162 K----GHIVTLNTIAKVMRRFSG---AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLC 214
+ ++++ NT+ G AG+ ++A + D + + GL+ + + + LL C
Sbjct: 577 RVGVRPNVISYNTL------IGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYC 630
Query: 215 KEGKVELARSVFLE-LKSCIPPNA-----------------------------------H 238
K G+++ A +F E L+ + P A +
Sbjct: 631 KTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIY 690
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
T+NI ++G CK N VDEA Q + P +I+++ +I + +L +
Sbjct: 691 TYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASI 750
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYT-LGRASR 357
+ G PNVVTY +M + + G +E + M+ G PDS N +I + LGR
Sbjct: 751 PSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEI 810
Query: 358 VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSH--HGHHEKA----FHVLEEMN 405
++ Y+ +++ E + + ST + +I++FS + +H K+ + LEE+N
Sbjct: 811 MRAGAYLSKID--EMNFSLEASTTSLLISLFSREEYKNHAKSLPEKYLFLEEVN 862
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 128/299 (42%), Gaps = 19/299 (6%)
Query: 218 KVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
+ AR LEL+ I A + ++ I D+A E+ H V +++
Sbjct: 4 RASAARDRCLELERVIADRARSGSLGI---------DDALKLFDELLPHARPASVRAFNH 54
Query: 278 IIQSYCRQY--NFSKVYELLDEMQAQGCP----PNVVTYTTVMSYLAKSGDFEEAIRITE 331
++ R + S++ L A+ C P++ TY+ + + G E
Sbjct: 55 LLNVVARARCSSTSELAVSLFNRMARACSNKVRPDLCTYSILTGCFCRLGRIEHGFAAFG 114
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHH 391
+ G + + N L+ L A RV EA+ + MPE G P+ + NT++ +
Sbjct: 115 LILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNE 174
Query: 392 GHHEKAFHVLEEM--NKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSL 449
E+A +L M + +C PNV T++ ++ K D +L M++K + L
Sbjct: 175 KRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRA-EGVLQHMIDK-GVKL 232
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
D+ TY+ +I GLC+A + A + + MI + P T I+D + + D AE +
Sbjct: 233 DVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGV 291
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 171/326 (52%), Gaps = 5/326 (1%)
Query: 183 QWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFN 241
+ E A+ ++ + G + T ++ LC E ++ AR E+ + + PN T+
Sbjct: 26 RLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYT 85
Query: 242 IFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ 301
+ I G CK RVDEA + +M+ C P ++Y+++I C+ S+ Y+LL+EM
Sbjct: 86 VLIDGLCKGGRVDEAVALLSKMRKK-CVPTAVTYNSLISGLCKAERASEAYDLLEEMVYS 144
Query: 302 GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
GC P++ TYTT+++ KS ++A+R+ E++ G +PD ++CLI L + R++EA
Sbjct: 145 GCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEA 204
Query: 362 VYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLL 421
+ ++ + P+T T+N++I+ F G ++A ++LE M + P+V T+ L+
Sbjct: 205 IDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGS-SPDVVTYTTLM 263
Query: 422 KSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHD 481
K + D+ LL+ M K L+ D+ T+T ++ GLCR N+ A + EM
Sbjct: 264 NGFCKLARLDDAY-DLLNQMTRKG-LTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKS 321
Query: 482 ITPRYQTCRLILDEVKQKHMYDAAEK 507
+P T ILD + + + A K
Sbjct: 322 CSPTVYTYNTILDGYCRANQLEEARK 347
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 175/344 (50%), Gaps = 7/344 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ L KV++++Q L +M SKG + T V+ + +A + +E+
Sbjct: 14 YTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMA 73
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDE 255
L N T +L+D LCK G+V+ A ++ +++ P A T+N I G CK R E
Sbjct: 74 NRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSLISGLCKAERASE 133
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
A ++EM GC P + +Y+T+I +C+ + +++ A+G P+VVTY+ ++
Sbjct: 134 AYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLID 193
Query: 316 YLAKSGDFEEAIRITEKMKIVGS-KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
L K G +EAI + +M GS P++ +N LI R ++ EA+ + + M E G
Sbjct: 194 GLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLE-RMAETGS 252
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
+PD T+ T++ F + A+ +L +M + + P+V TF L+ + + + +
Sbjct: 253 SPDVVTYTTLMNGFCKLARLDDAYDLLNQMTR-KGLTPDVVTFTSLMDGLCRENRLSDAV 311
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAY-LLFKEM 477
+L +M + S + TY ++ G CRAN+ E A + +EM
Sbjct: 312 -HILGEM-RRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEM 353
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 179/376 (47%), Gaps = 39/376 (10%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ L K + + LLEEM G I + T ++ F + + +DA+R F++L
Sbjct: 118 YNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLV 177
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVF---LELKSCIPPNAHTFNIFIHGWCKINR 252
G + T + L+D LCKEG+++ A +F ++ SC+P N T+N I G+C++ +
Sbjct: 178 ARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMP-NTVTYNSLISGFCRMGK 236
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
+DEA ++ M G P V++Y+T++ +C+ Y+LL++M +G P+VVT+T+
Sbjct: 237 MDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTS 296
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN 372
+M L + +A+ I +M+ P +N ++ RA++++EA + + E
Sbjct: 297 LMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEA---RKFMLEEM 353
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
P+ +FN MI +A ++EE + C P+V + ++ + K DE
Sbjct: 354 DCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARR-RRCNPDVVMYTTVIDGLCREKKVDE 412
Query: 433 -------------CL------SQLLDDMVNKHHLSL-----------DITTYTLVIHGLC 462
CL S L+ + N L +I TY L+I
Sbjct: 413 ACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYIEKGCVPNIGTYNLLIDAFR 472
Query: 463 RANKCEWAYLLFKEMI 478
+AN+ E A L +M+
Sbjct: 473 KANRDEDARELLDDMV 488
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/417 (26%), Positives = 191/417 (45%), Gaps = 27/417 (6%)
Query: 41 IESYCSDGARLDHHQVL-------CVDSPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVC 93
I+ C G R+D L CV P + +IS + E + L ++ V
Sbjct: 88 IDGLCK-GGRVDEAVALLSKMRKKCV--PTAVTYNSLISGLCKAERASEAYD-LLEEMVY 143
Query: 94 NAIQPSHYLVNKLIHRFKDDWKS--ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMD 151
+ P + LI F KS AL +F + G+ Y ++D L K ++
Sbjct: 144 SGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVA-RGFRPDVVTYSCLIDGLCKEGRLK 202
Query: 152 QMRALLEEMSKGHIVTLNTIA--KVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLL 209
+ L M K NT+ ++ F G+ ++A+ + + G + T L
Sbjct: 203 EAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTL 262
Query: 210 LDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGC 268
++ CK +++ A + ++ + + P+ TF + G C+ NR+ +A + EM+ C
Sbjct: 263 MNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSC 322
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYE-LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
P V +Y+TI+ YCR + + +L+EM CPPNVV++ ++ L K EA+
Sbjct: 323 SPTVYTYNTILDGYCRANQLEEARKFMLEEMD---CPPNVVSFNIMIRGLCKVNRSSEAM 379
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITM 387
+ E+ + PD + +I L R +V EA VY+ + E G P++ T++T+IT
Sbjct: 380 ELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITG 439
Query: 388 FSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK 444
+ G ++A +E + C PN+ T++ LL F+ DE +LLDDMV +
Sbjct: 440 LCNAGMLDRARGYIE-----KGCVPNIGTYN-LLIDAFRKANRDEDARELLDDMVQR 490
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 153/312 (49%), Gaps = 7/312 (2%)
Query: 205 TMNLLLDTLCKEGKVELARSVFLE--LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQE 262
T L+ LCK ++E A +FL + P+ +T+ IH C NR+ EA+ ++E
Sbjct: 13 TYTSLIQGLCKVKRLEQA-LIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEE 71
Query: 263 MKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGD 322
M P V++Y+ +I C+ + LL +M+ + C P VTY +++S L K+
Sbjct: 72 MANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK-CVPTAVTYNSLISGLCKAER 130
Query: 323 FEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFN 382
EA + E+M G PD + LI ++ + +A+ V++ ++ G PD T++
Sbjct: 131 ASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFE-QLVARGFRPDVVTYS 189
Query: 383 TMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMV 442
+I G ++A + M K C PN T++ L+ + GK DE ++ LL+ M
Sbjct: 190 CLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMN-LLERMA 248
Query: 443 NKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMY 502
S D+ TYT +++G C+ + + AY L +M +TP T ++D + +++
Sbjct: 249 ETGS-SPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRL 307
Query: 503 DAAEKIEAVMKK 514
A I M++
Sbjct: 308 SDAVHILGEMRR 319
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 97/278 (34%), Gaps = 78/278 (28%)
Query: 98 PSHYLVNKLIHRF-----KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQ 152
P+ N LI F D+ + L GS P Y +++ K+ ++D
Sbjct: 219 PNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSP----DVVTYTTLMNGFCKLARLDD 274
Query: 153 MRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLD 211
LL +M+ KG + T +M + DAV E+ T N +LD
Sbjct: 275 AYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILD 334
Query: 212 TLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH----- 266
C+ ++E AR LE C PPN +FNI I G CK+NR EA ++E +
Sbjct: 335 GYCRANQLEEARKFMLEEMDC-PPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPD 393
Query: 267 -------------------------------GCHPCVISYSTIIQSYCRQ---------- 285
GC P I+YST+I C
Sbjct: 394 VVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYI 453
Query: 286 ----------YN-----FSKV------YELLDEMQAQG 302
YN F K ELLD+M +G
Sbjct: 454 EKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 124/456 (27%), Positives = 208/456 (45%), Gaps = 53/456 (11%)
Query: 95 AIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMR 154
++ PSH V+ L F D ++AL F W PG++H+ Y M++IL + R +
Sbjct: 65 SLTPSH--VSSLF-AFNLDPQTALSFFNWIALRPGFKHNVHSYSSMLNILIRAR----LL 117
Query: 155 ALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLC 214
+ E++ I + +I V+ + R + G F + N +L +L
Sbjct: 118 GVAEKIRISMIKSCCSIEDVLFVL-------EVFRKMNADGEFKFKPTLRCYNTILMSLS 170
Query: 215 KEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI 273
K ++ ++V+LEL + I PN +TFN ++G+CKI V EA+ ++ G HP
Sbjct: 171 KFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTF 230
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
+Y+++I +CR YE+ M +GC N V+YT ++ L ++G EA+++ M
Sbjct: 231 TYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADM 290
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEA---------------VYVYQV----------- 367
P R + LIY L + R EA V+ Y V
Sbjct: 291 TEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKM 350
Query: 368 --------EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
EM E G+ P T+N +I + G + AF +L+ M C PN +T++
Sbjct: 351 DEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMES-NSCGPNTRTYNE 409
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
L+ K K + ++ LL+ M+ + LS + TY +IHG C+ N E AY L M
Sbjct: 410 LICGLCKKRKVHKAMA-LLNKMLER-KLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNE 467
Query: 480 HDITPRYQTCRLILDEV-KQKHMYDAAEKIEAVMKK 514
+ + P T + +D + K+ + +A ++V K
Sbjct: 468 NGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAK 503
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 185/388 (47%), Gaps = 6/388 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDA 187
G + + Y ++ L + ++++ L +M++ + T+ T ++ SG+G+ +A
Sbjct: 259 GCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEA 318
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHG 246
+ F+E+ G E N T +L+D LCKE K++ AR + E+ + + P+ T+N I G
Sbjct: 319 LNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDG 378
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
+CK +D+A + M+ + C P +Y+ +I C++ K LL++M + P+
Sbjct: 379 YCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPS 438
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
++TY +++ K D E A R+ M G PD ++ I TL + RV+EA ++
Sbjct: 439 LITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFD 498
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
+ GV + + +I + G + A+ +LE M + C PN T++ L++ K
Sbjct: 499 -SVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLN-DACLPNSYTYNVLIEGLCK 556
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
K E S L+ M+ + + TYT++I + + + A +F M+ P
Sbjct: 557 EKKMKEA-SSLVAKMLT-MGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDV 614
Query: 487 QTCRLILDEVKQKHMYDAAEKIEAVMKK 514
T L + M + + + A M +
Sbjct: 615 CTYTAFLHAYFSQGMLEEVDDVIAKMNE 642
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 153/357 (42%), Gaps = 24/357 (6%)
Query: 146 KVRQMDQMRALLEEMSKGHIVTLN-TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTE 204
KV ++ LL M++ +V T + + G+ E+A FD + G++ N
Sbjct: 451 KVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEV 510
Query: 205 TMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQE 262
L+D CK GK+++A S+ + +C+P N++T+N+ I G CK ++ EA + +
Sbjct: 511 IYTALIDGYCKVGKIDVAYSLLERMLNDACLP-NSYTYNVLIEGLCKEKKMKEASSLVAK 569
Query: 263 MKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGD 322
M G P V++Y+ +I + F ++ + M + G P+V TYT + G
Sbjct: 570 MLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGM 629
Query: 323 FEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFN 382
EE + KM G PD + LI R A + + M + G P +
Sbjct: 630 LEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRA-FDFLKCMVDTGCKPSLYIVS 688
Query: 383 TMITMFSHHG-----HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
+I SH E + +N ++ + +KT + + L +L
Sbjct: 689 ILIKNLSHENRMKETRSEIGIDSVSNVNSVD------------IADVWKTLEYEIAL-KL 735
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
+ MV +H ++D++ Y +I G C+ + E A L M ++P +LD
Sbjct: 736 FEKMV-EHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLD 791
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/383 (21%), Positives = 147/383 (38%), Gaps = 71/383 (18%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G + + IY ++D KV ++D +LLE M + + T ++ + ++A
Sbjct: 504 GVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEA 563
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHG 246
++ T G++ T +L+ + K+G + A VF + S P+ T+ F+H
Sbjct: 564 SSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHA 623
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
+ ++E I +M G P +++Y+ +I Y R + ++ L M GC P+
Sbjct: 624 YFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPS 683
Query: 307 VVTYTTVMSYLA-----------------------------KSGDFEEAIRITEKMKIVG 337
+ + ++ L+ K+ ++E A+++ EKM G
Sbjct: 684 LYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHG 743
Query: 338 SKPDSRFFNCLIYTLGRASRVQEA------------------------------VYVYQV 367
D + LI + R++EA VY V
Sbjct: 744 CTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAV 803
Query: 368 E----MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQ--TFHPLL 421
M ENG+ P ++ ++ G +EKA V + L C N + L+
Sbjct: 804 RLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVF---HGLLSCGYNYDEVAWKVLI 860
Query: 422 KSCFKTGKTDECLSQLLDDMVNK 444
K DEC S+L+D M K
Sbjct: 861 DGLLKRDLVDEC-SELIDIMEEK 882
>gi|224136310|ref|XP_002326829.1| predicted protein [Populus trichocarpa]
gi|222835144|gb|EEE73579.1| predicted protein [Populus trichocarpa]
Length = 664
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/422 (27%), Positives = 204/422 (48%), Gaps = 22/422 (5%)
Query: 107 IHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALL---EEMSKG 163
+ RF A F WA S G+ H S Y MM+DILG+ ++ R L E S G
Sbjct: 33 VLRFIASPPKAFEFFNWA-SRNGFAHDSRSYFMMLDILGRNGNLNIARNFLFSIERRSNG 91
Query: 164 HIVTLNTIAK-VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELA 222
+ + ++R + AG + +A++ F + + G+ + T N LL L K G+ +A
Sbjct: 92 SVKIEDRFCNTLLRSYGNAGLFNEAIKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNMA 151
Query: 223 RSVFLELKSC--IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQ 280
SVF E+ + P+ +TFNI I G+CK + VDE +EM C P V++Y+T++
Sbjct: 152 HSVFDEMCGTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVD 211
Query: 281 SYCRQYNFSKVYELLDEM--QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
CR + ++ M + + P+VVTYTT++ + +EA+ + E+M G
Sbjct: 212 GLCRAGKVRIAHNVVKGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGL 271
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
KP+ +N LI L + + + + G PDT T+NT++ G+ ++A
Sbjct: 272 KPNDITYNTLIKGLCEVQKFDKIKEILGGAVGGRGFVPDTCTYNTLMNAQCDAGNFDEAL 331
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLD------IT 452
+ ++M +L+ +P+ T+ L+++ + G + QL D + ++ L D +
Sbjct: 332 KMFKKMKELK-VQPDSATYSVLIRNLCQRGDFERA-EQLFDKLSDEDILLRDDGCTPLVA 389
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMI--GHDITPRYQTCRLILDEVKQKHMYDAAEKIEA 510
Y + LC+ K A +F++++ G P Y+T LI+ K+ ++A K+
Sbjct: 390 AYNPIFDFLCKNGKTHKAERVFRQLMKKGTQDPPSYKT--LIIGHCKE-GTFEAGYKLLL 446
Query: 511 VM 512
M
Sbjct: 447 FM 448
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/421 (20%), Positives = 180/421 (42%), Gaps = 42/421 (9%)
Query: 90 DHVCNA--IQPSHYLVNKLIHRFKD-------------------DWKSALGIFRWAGSCP 128
D +C A ++ +H +V ++ + KD + AL +F S
Sbjct: 211 DGLCRAGKVRIAHNVVKGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVS-R 269
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM--SKGHIVTLNTIAKVMRRFSGAGQWED 186
G + + Y ++ L +V++ D+++ +L +G + T +M AG +++
Sbjct: 270 GLKPNDITYNTLIKGLCEVQKFDKIKEILGGAVGGRGFVPDTCTYNTLMNAQCDAGNFDE 329
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK---------SCIPPNA 237
A++ F ++ ++ ++ T ++L+ LC+ G E A +F +L C P A
Sbjct: 330 ALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDILLRDDGCTPLVA 389
Query: 238 HTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDE 297
+N CK + +A+ +++ G SY T+I +C++ F Y+LL
Sbjct: 390 -AYNPIFDFLCKNGKTHKAERVFRQLMKKGTQDPP-SYKTLIIGHCKEGTFEAGYKLLLF 447
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
M + P+ TY +++ + G+ A + E+M P + F+ ++ L +
Sbjct: 448 MLRRDYVPDFETYVLLINGFLQKGEPILAYKTLERMLKSSYLPKTSVFHSILSELLKNDF 507
Query: 358 VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTF 417
+E+ + V M + + + + + + G KAF ++E L + +
Sbjct: 508 ARESA-SFVVLMIDRKIRQNINLSTHTMRLLFGSGLRIKAFQIVE----LLYDNGYMVDM 562
Query: 418 HPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
L+ + GK + ++L + K H ++DI +VI GLC+ + A+ L+ +
Sbjct: 563 EELIGFICQNGKLLDA-QKMLSFCLEKGH-NVDINVCNVVIEGLCKMKRPLEAFGLYYML 620
Query: 478 I 478
+
Sbjct: 621 V 621
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 171/326 (52%), Gaps = 5/326 (1%)
Query: 183 QWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFN 241
+ E A+ ++ + G + T ++ LC E ++ AR E+ + + PN T+
Sbjct: 26 RLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYT 85
Query: 242 IFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ 301
+ I G CK RVDEA + +M+ C P ++Y+++I C+ S+ Y+LL+EM
Sbjct: 86 VLIDGLCKGGRVDEAVALLSKMRKK-CVPTAVTYNSLISGLCKAERASEAYDLLEEMVYS 144
Query: 302 GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
GC P++ TYTT+++ KS ++A+R+ E++ G +PD ++CLI L + R++EA
Sbjct: 145 GCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEA 204
Query: 362 VYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLL 421
+ ++ + P+T T+N++I+ F G ++A ++LE M + P+V T+ L+
Sbjct: 205 IDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGS-SPDVVTYTTLM 263
Query: 422 KSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHD 481
K + D+ LL+ M K L+ D+ T+T ++ GLCR N+ A + EM
Sbjct: 264 NGFCKLARLDDAY-DLLNQMTRKG-LTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKS 321
Query: 482 ITPRYQTCRLILDEVKQKHMYDAAEK 507
+P T ILD + + + A K
Sbjct: 322 CSPTVYTYNTILDGYCRANQLEEARK 347
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 175/344 (50%), Gaps = 7/344 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ L KV++++Q L +M SKG + T V+ + +A + +E+
Sbjct: 14 YTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMA 73
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDE 255
L N T +L+D LCK G+V+ A ++ +++ P A T+N I G CK R E
Sbjct: 74 NRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSLISGLCKAERASE 133
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
A ++EM GC P + +Y+T+I +C+ + +++ A+G P+VVTY+ ++
Sbjct: 134 AYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLID 193
Query: 316 YLAKSGDFEEAIRITEKMKIVGS-KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
L K G +EAI + +M GS P++ +N LI R ++ EA+ + + M E G
Sbjct: 194 GLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLE-RMAETGS 252
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
+PD T+ T++ F + A+ +L +M + + P+V TF L+ + + + +
Sbjct: 253 SPDVVTYTTLMNGFCKLARLDDAYDLLNQMTR-KGLTPDVVTFTSLMDGLCRENRLSDAV 311
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAY-LLFKEM 477
+L +M + S + TY ++ G CRAN+ E A + +EM
Sbjct: 312 -HILGEM-RRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEM 353
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 179/376 (47%), Gaps = 39/376 (10%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ L K + + LLEEM G I + T ++ F + + +DA+R F++L
Sbjct: 118 YNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLV 177
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVF---LELKSCIPPNAHTFNIFIHGWCKINR 252
G + T + L+D LCKEG+++ A +F ++ SC+P N T+N I G+C++ +
Sbjct: 178 ARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMP-NTVTYNSLISGFCRMGK 236
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
+DEA ++ M G P V++Y+T++ +C+ Y+LL++M +G P+VVT+T+
Sbjct: 237 MDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTS 296
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN 372
+M L + +A+ I +M+ P +N ++ RA++++EA + + E
Sbjct: 297 LMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEA---RKFMLEEM 353
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
P+ +FN MI +A ++EE + C P+V + ++ + K DE
Sbjct: 354 DCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARR-RRCNPDVVMYTTVIDGLCREKKVDE 412
Query: 433 -------------CL------SQLLDDMVNKHHLSL-----------DITTYTLVIHGLC 462
CL S L+ + N L +I TY L+I
Sbjct: 413 ACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYIEKGCVPNIGTYNLLIDAFR 472
Query: 463 RANKCEWAYLLFKEMI 478
+AN+ E A L +M+
Sbjct: 473 KANRDEDARELLDDMV 488
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 109/417 (26%), Positives = 191/417 (45%), Gaps = 27/417 (6%)
Query: 41 IESYCSDGARLDHHQVL-------CVDSPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVC 93
I+ C G R+D L CV P + +IS + E + L ++ V
Sbjct: 88 IDGLCK-GGRVDEAVALLSKMRKKCV--PTAVTYNSLISGLCKAERASEAYD-LLEEMVY 143
Query: 94 NAIQPSHYLVNKLIHRFKDDWKS--ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMD 151
+ P + LI F KS AL +F + G+ Y ++D L K ++
Sbjct: 144 SGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVA-RGFRPDVVTYSCLIDGLCKEGRLK 202
Query: 152 QMRALLEEMSKGHIVTLNTIA--KVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLL 209
+ L M K NT+ ++ F G+ ++A+ + + G + T L
Sbjct: 203 EAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTL 262
Query: 210 LDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGC 268
++ CK +++ A + ++ + + P+ TF + G C+ NR+ +A + EM+ C
Sbjct: 263 MNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSC 322
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYE-LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
P V +Y+TI+ YCR + + +L+EM CPPNVV++ ++ L K EA+
Sbjct: 323 SPTVYTYNTILDGYCRANQLEEARKFMLEEMD---CPPNVVSFNIMIRGLCKVNRSSEAM 379
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITM 387
+ E+ + PD + +I L R +V EA VY+ + E G P++ T++T++T
Sbjct: 380 ELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTG 439
Query: 388 FSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK 444
+ G ++A +E + C PN+ T++ LL F+ DE +LLDDMV +
Sbjct: 440 LCNAGMLDRARGYIE-----KGCVPNIGTYN-LLIDAFRKANRDEDARELLDDMVQR 490
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 153/312 (49%), Gaps = 7/312 (2%)
Query: 205 TMNLLLDTLCKEGKVELARSVFLE--LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQE 262
T L+ LCK ++E A +FL + P+ +T+ IH C NR+ EA+ ++E
Sbjct: 13 TYTSLIQGLCKVKRLEQA-LIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEE 71
Query: 263 MKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGD 322
M P V++Y+ +I C+ + LL +M+ + C P VTY +++S L K+
Sbjct: 72 MANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK-CVPTAVTYNSLISGLCKAER 130
Query: 323 FEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFN 382
EA + E+M G PD + LI ++ + +A+ V++ ++ G PD T++
Sbjct: 131 ASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFE-QLVARGFRPDVVTYS 189
Query: 383 TMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMV 442
+I G ++A + M K C PN T++ L+ + GK DE ++ LL+ M
Sbjct: 190 CLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMN-LLERMA 248
Query: 443 NKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMY 502
S D+ TYT +++G C+ + + AY L +M +TP T ++D + +++
Sbjct: 249 ETGS-SPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRL 307
Query: 503 DAAEKIEAVMKK 514
A I M++
Sbjct: 308 SDAVHILGEMRR 319
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 99/278 (35%), Gaps = 78/278 (28%)
Query: 98 PSHYLVNKLIHRF-----KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQ 152
P+ N LI F D+ + L GS P Y +++ K+ ++D
Sbjct: 219 PNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSP----DVVTYTTLMNGFCKLARLDD 274
Query: 153 MRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLD 211
LL +M+ KG + T +M + DAV E+ T N +LD
Sbjct: 275 AYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILD 334
Query: 212 TLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINR------------------- 252
C+ ++E AR LE C PPN +FNI I G CK+NR
Sbjct: 335 GYCRANQLEEARKFMLEEMDC-PPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPD 393
Query: 253 ----------------VDEAQWTIQEM-KGHGCHPCVISYSTIIQSYCRQ---------- 285
VDEA ++M + GC P I+YST++ C
Sbjct: 394 VVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYI 453
Query: 286 ----------YN-----FSKV------YELLDEMQAQG 302
YN F K ELLD+M +G
Sbjct: 454 EKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 124/456 (27%), Positives = 208/456 (45%), Gaps = 53/456 (11%)
Query: 95 AIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMR 154
++ PSH V+ L F D ++AL F W PG++H+ Y M++IL + R +
Sbjct: 65 SLTPSH--VSSLF-AFNLDPQTALSFFNWIALRPGFKHNVHSYSSMLNILIRAR----LL 117
Query: 155 ALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLC 214
+ E++ I + +I V+ + R + G F + N +L +L
Sbjct: 118 GVAEKIRISMIKSCCSIEDVLFVL-------EVFRKMNADGEFKFKPTLRCYNTILMSLS 170
Query: 215 KEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI 273
K ++ ++V+LEL + I PN +TFN ++G+CKI V EA+ ++ G HP
Sbjct: 171 KFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTF 230
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
+Y+++I +CR YE+ M +GC N V+YT ++ L ++G EA+++ M
Sbjct: 231 TYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADM 290
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEA---------------VYVYQV----------- 367
P R + LIY L + R EA V+ Y V
Sbjct: 291 TEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKM 350
Query: 368 --------EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
EM E G+ P T+N +I + G + AF +L+ M C PN +T++
Sbjct: 351 DEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMES-NSCGPNTRTYNE 409
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
L+ K K + ++ LL+ M+ + LS + TY +IHG C+ N E AY L M
Sbjct: 410 LICGLCKKRKVHKAMA-LLNKMLER-KLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNE 467
Query: 480 HDITPRYQTCRLILDEV-KQKHMYDAAEKIEAVMKK 514
+ + P T + +D + K+ + +A ++V K
Sbjct: 468 NGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAK 503
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 185/388 (47%), Gaps = 6/388 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDA 187
G + + Y ++ L + ++++ L +M++ + T+ T ++ SG+G+ +A
Sbjct: 259 GCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEA 318
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHG 246
+ F+E+ G E N T +L+D LCKE K++ AR + E+ + + P+ T+N I G
Sbjct: 319 LNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDG 378
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
+CK +D+A + M+ + C P +Y+ +I C++ K LL++M + P+
Sbjct: 379 YCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPS 438
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
++TY +++ K D E A R+ M G PD ++ I TL + RV+EA ++
Sbjct: 439 LITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFD 498
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
+ GV + + +I + G + A+ +LE M + C PN T++ L++ K
Sbjct: 499 -SVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLN-DACLPNSYTYNVLIEGLCK 556
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
K E S L+ M+ + + TYT++I + + + A +F M+ P
Sbjct: 557 EKKMKEA-SSLVAKMLT-MGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDV 614
Query: 487 QTCRLILDEVKQKHMYDAAEKIEAVMKK 514
T L + M + + + A M +
Sbjct: 615 CTYTAFLHAYFSQGMLEEVDDVIAKMNE 642
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/386 (22%), Positives = 158/386 (40%), Gaps = 57/386 (14%)
Query: 146 KVRQMDQMRALLEEMSKGHIVTLN-TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTE 204
KV ++ LL M++ +V T + + G+ E+A FD + G++ N
Sbjct: 451 KVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEV 510
Query: 205 TMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQE 262
L+D CK GK+++A S+ + +C+P N++T+N+ I G CK ++ EA + +
Sbjct: 511 IYTALIDGYCKVGKIDVAYSLLERMLNDACLP-NSYTYNVLIEGLCKEKKMKEASSLVAK 569
Query: 263 MKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGD 322
M G P V++Y+ +I + F ++ + M + G P+V TYT + G
Sbjct: 570 MLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGM 629
Query: 323 FEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFN 382
EE + KM E G+ PD T+
Sbjct: 630 LEEVDDVIAKMN------------------------------------EEGILPDLVTYT 653
Query: 383 TMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMV 442
+I ++ G +AF L+ M CKP++ L+K+ + E S++ D V
Sbjct: 654 VLIDGYARLGLTHRAFDFLKCMVD-TGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSV 712
Query: 443 N----------------KHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
+ +H ++D++ Y +I G C+ + E A L M ++P
Sbjct: 713 SNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSE 772
Query: 487 QTCRLILDEVKQKHMYDAAEKIEAVM 512
+LD + +Y A ++ M
Sbjct: 773 DIYNSLLDCCCKLGVYAEAVRLVDAM 798
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 77/388 (19%), Positives = 145/388 (37%), Gaps = 98/388 (25%)
Query: 133 SSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTF 191
+S Y ++++ L K ++M + +L+ +M + G T+ T ++ G ++ A++ F
Sbjct: 543 NSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVF 602
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKI 250
+ + + G + + T L +G +E V ++ + I P+ T+ + I G+ ++
Sbjct: 603 NHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARL 662
Query: 251 -----------------------------------NRVDEAQWTI--------------- 260
NR+ E + I
Sbjct: 663 GLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIAL 722
Query: 261 ---QEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
++M HGC V Y +I +C+Q + L+ M+ +G P+ Y +++
Sbjct: 723 KLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCC 782
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
K G + EA+R+ + M ENG+ P
Sbjct: 783 CKLGVYAEAVRLVDA------------------------------------MVENGLLPL 806
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQ--TFHPLLKSCFKTGKTDECLS 435
++ ++ G +EKA V + L C N + L+ K DEC S
Sbjct: 807 LESYKLLVCGLYIEGSNEKAKAVF---HGLLSCGYNYDEVAWKVLIDGLLKRDLVDEC-S 862
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCR 463
+L+D M K + TY+L+I GL R
Sbjct: 863 ELIDIMEEK-GCQPNPLTYSLLIEGLER 889
>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g06920-like [Cucumis sativus]
Length = 904
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 123/432 (28%), Positives = 215/432 (49%), Gaps = 23/432 (5%)
Query: 82 EVFQSLKQDHVCNAIQPSHYLVNKLI------HRFKDDWKSALGIFRWAGSCPGYEHSSE 135
E+F+ + Q N P Y N +I +F+D + S L R G P S
Sbjct: 326 ELFEHMDQ----NKQVPCAYAYNTMIMGYGMAGKFEDAY-SLLERQRRKGCIP----SVV 376
Query: 136 IYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ LG+ Q+D+ EEM K I L+T ++ AG+ E A+ D +
Sbjct: 377 SYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMK 436
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKINRV 253
GL N T+N+++D LCK +++ A S+F L+ K+C P+A T+ I G + RV
Sbjct: 437 DAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTC-RPDAVTYCSLIEGLGRHGRV 495
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
DEA ++M P + Y+++I+++ + +++ +EM GC P+++ T
Sbjct: 496 DEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTY 555
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
M + K+G+ E+ + +++K +G PD+R + LI+ L +A EA ++ M E G
Sbjct: 556 MDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYT-MKEQG 614
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
DT +NT+I F G KA+ +LEEM H +P V T+ ++ K + DE
Sbjct: 615 CVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGH-EPTVVTYGSVIDGLAKIDRLDE- 672
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
+ +L + + L++ Y+ +I G + + + AYL+ +E++ +TP T +L
Sbjct: 673 -AYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLL 731
Query: 494 DE-VKQKHMYDA 504
D VK + + +A
Sbjct: 732 DALVKAEEISEA 743
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 190/415 (45%), Gaps = 41/415 (9%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +++ LG+ ++D+ L E+M I ++R F G+ ED + ++E+
Sbjct: 482 YCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEML 541
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVD 254
G + +N +D + K G++E R++F E+K+ P+A ++ I IHG K
Sbjct: 542 RLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAH 601
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA MK GC +Y+T+I +C+ +K Y+LL+EM+ +G P VVTY +V+
Sbjct: 602 EAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVI 661
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
LAK +EA + E+ K G + + ++ LI G+ R+ EA Y+ E+ + G+
Sbjct: 662 DGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEA-YLIMEELMQKGL 720
Query: 375 APDTSTFNTMITMFSH------------------------------HG-----HHEKAFH 399
P+ T+N ++ HG KAF
Sbjct: 721 TPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFV 780
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIH 459
+EM K + KPNV T+ ++ K G E L + K ++ D Y +I
Sbjct: 781 FWQEMQK-QGFKPNVFTYTTMISGLAKAGNIVEA-DTLFEKFKEKGGVA-DSAIYNAIIE 837
Query: 460 GLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
GL AN+ AY LF+E + +TC ++LD + + + A + AV+++
Sbjct: 838 GLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIVGAVLRE 892
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 176/350 (50%), Gaps = 7/350 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ L R D M L ++M + G+ V ++ ++R F+ G+ + A+ DE+
Sbjct: 203 YTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMK 262
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVD 254
+ LE + N+ +D K GKV++A F E+K+ + + T+ I CK +R++
Sbjct: 263 SNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLN 322
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA + M + PC +Y+T+I Y F Y LL+ + +GC P+VV+Y ++
Sbjct: 323 EAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCIL 382
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
S L + G +EA++ E+MK + P+ +N +I L +A +++ A+ V M + G+
Sbjct: 383 SCLGRKGQVDEALKKFEEMK-KDAIPNLSTYNIMIDMLCKAGKLETALVVRDA-MKDAGL 440
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
P+ T N M+ + A + E ++ + C+P+ T+ L++ + G+ DE
Sbjct: 441 FPNVITVNIMVDRLCKAQRLDDACSIFEGLDH-KTCRPDAVTYCSLIEGLGRHGRVDEAY 499
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
+L + M++ + + + YT +I + + E + ++ EM+ +P
Sbjct: 500 -KLYEQMLDANQIP-NAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSP 547
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 109/426 (25%), Positives = 188/426 (44%), Gaps = 43/426 (10%)
Query: 96 IQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRA 155
+ P+ LV ++ R KD +A+ FRWA H E Y ++ ++ + R+ + +
Sbjct: 93 LNPNPELVIGVLRRLKD-VNNAVNYFRWAERLTDRAHCREAYNSLLMVMARTRKFNCLEQ 151
Query: 156 LLEEMSKGHIVTLN--------------------TIAKVMRR------FSGAGQWEDAVR 189
+LEEMS N T + MR+ FS A+
Sbjct: 152 ILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALS 211
Query: 190 T----------FDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAH 238
T F ++ G N L+ +EG+V+ A S+ E+KS + P+
Sbjct: 212 TSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVV 271
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
+N+ I + K +VD A EMK +G ++Y+++I C+ ++ EL + M
Sbjct: 272 LYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHM 331
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRV 358
P Y T++ +G FE+A + E+ + G P +NC++ LGR +V
Sbjct: 332 DQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQV 391
Query: 359 QEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFH 418
EA+ ++ EM ++ + P+ ST+N MI M G E A V + M K PNV T +
Sbjct: 392 DEALKKFE-EMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAM-KDAGLFPNVITVN 448
Query: 419 PLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
++ K + D+ S + + ++ D TY +I GL R + + AY L+++M+
Sbjct: 449 IMVDRLCKAQRLDDACS--IFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQML 506
Query: 479 GHDITP 484
+ P
Sbjct: 507 DANQIP 512
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 104/425 (24%), Positives = 175/425 (41%), Gaps = 12/425 (2%)
Query: 86 SLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAG----SCPGYEHSSEIYEMMV 141
SL + N+++P L N I F K + W G Y M+
Sbjct: 256 SLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMA---WKXFHEMKANGLVLDDVTYTSMI 312
Query: 142 DILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSG-AGQWEDAVRTFDELGTFGLE 200
+L K ++++ L E M + V M G AG++EDA + G
Sbjct: 313 GVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCI 372
Query: 201 KNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTI 260
+ + N +L L ++G+V+ A F E+K PN T+NI I CK +++ A
Sbjct: 373 PSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKAGKLETALVVR 432
Query: 261 QEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKS 320
MK G P VI+ + ++ C+ + + + + C P+ VTY +++ L +
Sbjct: 433 DAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRH 492
Query: 321 GDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTST 380
G +EA ++ E+M P++ + LI + R ++ +Y EM G +PD
Sbjct: 493 GRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYN-EMLRLGCSPDLLL 551
Query: 381 FNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDD 440
NT + G EK + +E+ L P+ +++ L+ K G E L
Sbjct: 552 LNTYMDCVFKAGEIEKGRALFQEIKNLGFI-PDARSYTILIHGLVKAGFAHEAYE--LFY 608
Query: 441 MVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKH 500
+ + LD Y VI G C++ K AY L +EM P T ++D + +
Sbjct: 609 TMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKID 668
Query: 501 MYDAA 505
D A
Sbjct: 669 RLDEA 673
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 119/241 (49%), Gaps = 2/241 (0%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G+E + Y ++D L K+ ++D+ L EE SKG + + + ++ F G+ ++A
Sbjct: 649 GHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEA 708
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHG 246
+EL GL N T N LLD L K ++ A F +K PN T++I IHG
Sbjct: 709 YLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHG 768
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
CKI + ++A QEM+ G P V +Y+T+I + N + L ++ + +G +
Sbjct: 769 LCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVAD 828
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
Y ++ L+ + +A R+ E+ ++ G ++ L+ +L +A +++A V
Sbjct: 829 SAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIVGA 888
Query: 367 V 367
V
Sbjct: 889 V 889
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 146/345 (42%), Gaps = 42/345 (12%)
Query: 204 ETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQE 262
E N LL + + K + E+ + P+ +T + + K ++ EA IQ
Sbjct: 131 EAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQT 190
Query: 263 MKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGD 322
M+ P +Y+ +I + + + L +MQ G NV +TT++ A+ G
Sbjct: 191 MRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGR 250
Query: 323 FEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTST-- 380
+ A+ + ++MK +PD +N I G+A +V A + EM NG+ D T
Sbjct: 251 VDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFH-EMKANGLVLDDVTYT 309
Query: 381 ---------------------------------FNTMITMFSHHGHHEKAFHVLEEMNKL 407
+NTMI + G E A+ +LE +
Sbjct: 310 SMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRR- 368
Query: 408 EHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKC 467
+ C P+V +++ +L + G+ DE L + ++M K +++TY ++I LC+A K
Sbjct: 369 KGCIPSVVSYNCILSCLGRKGQVDEALKK-FEEM--KKDAIPNLSTYNIMIDMLCKAGKL 425
Query: 468 EWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEAV 511
E A ++ M + P T +++D + K + + DA E +
Sbjct: 426 ETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGL 470
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 182/351 (51%), Gaps = 11/351 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y MV Q+D R L+ M + T NT+ +R G G+ ++A+ D++
Sbjct: 123 YNAMVAGYCVTGQLDNARRLVAAMPMEPDTYTYNTL---IRGLCGRGRTDNALAVLDDML 179
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRV 253
G + T +LL+ CK + A + E+ K C P + T+N+ ++G C+ RV
Sbjct: 180 RRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAP-DIVTYNVVVNGICQEGRV 238
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
D+A ++ + +GC P +SY+ +++ C + +L+ EM +G PPNVVT+ +
Sbjct: 239 DDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNML 298
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
+S+L + G E A+ I +++ G P+S +N +++ + ++ A+ ++ M +G
Sbjct: 299 ISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVEL-MVSSG 357
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
PD ++NT++T G + A +L ++ K + C P + +++ ++ K GKT+E
Sbjct: 358 CYPDIVSYNTLLTALCRGGEVDAAVELLHQL-KDKGCTPVLISYNTVIDGLTKAGKTEEA 416
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
L +LL++MV K L DI TY+ + GLCR + E A F ++ I P
Sbjct: 417 L-ELLNEMVTKG-LQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRP 465
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 188/386 (48%), Gaps = 13/386 (3%)
Query: 132 HSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTF 191
H S + +L + +++ L+E M+ A ++++ +G+ +A R
Sbjct: 54 HRSAASNDRLRVLVRRGDLEEAIRLVESMAGLEPSAAGPCAALIKKLCASGRTAEARRVL 113
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKIN 251
E + + N ++ C G+++ AR + + + P+ +T+N I G C
Sbjct: 114 ASC-----EPDVMSYNAMVAGYCVTGQLDNARRLVAAMP--MEPDTYTYNTLIRGLCGRG 166
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
R D A + +M GC P V++Y+ ++++ C++ + + +LLDEM+ +GC P++VTY
Sbjct: 167 RTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYN 226
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
V++ + + G ++A+ + + G +P++ +N ++ L A R ++A + EM
Sbjct: 227 VVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKL-MAEMSR 285
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
G P+ TFN +I+ G E A +L+++ K C PN +++P+L + K K D
Sbjct: 286 KGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKY-GCTPNSLSYNPILHAFCKQKKMD 344
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRL 491
++ ++ MV+ DI +Y ++ LCR + + A L ++ TP +
Sbjct: 345 RAMA-FVELMVSSGCYP-DIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNT 402
Query: 492 ILDEVKQKHMYDAAEKI--EAVMKKL 515
++D + + + A ++ E V K L
Sbjct: 403 VIDGLTKAGKTEEALELLNEMVTKGL 428
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 146/291 (50%), Gaps = 9/291 (3%)
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSC 232
V++ A +WEDA + E+ G N T N+L+ LC+ G VE A + ++ K
Sbjct: 263 VLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYG 322
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
PN+ ++N +H +CK ++D A ++ M GC+P ++SY+T++ + CR
Sbjct: 323 CTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAV 382
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
ELL +++ +GC P +++Y TV+ L K+G EEA+ + +M G +PD ++ + L
Sbjct: 383 ELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGL 442
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
R R++EA+ + ++ + G+ P+T +N ++ A + M C P
Sbjct: 443 CREGRIEEAIKAF-CKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVS-NGCMP 500
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCR 463
N T+ L++ G E +++ ++ ++ + + TLV G R
Sbjct: 501 NESTYTILIEGLAYEGLVKEA-REMMAELCSR-----GVVSKTLVNKGAIR 545
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 86/179 (48%), Gaps = 6/179 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ L + ++D LL ++ KG L + V+ + AG+ E+A+ +E+
Sbjct: 365 YNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMV 424
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVD 254
T GL+ + T + + LC+EG++E A F +++ I PN +N + G CK
Sbjct: 425 TKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATH 484
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
A M +GC P +Y+ +I+ + + E++ E+ ++G VV+ T V
Sbjct: 485 SAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSRG----VVSKTLV 539
>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Cucumis sativus]
Length = 904
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 123/432 (28%), Positives = 215/432 (49%), Gaps = 23/432 (5%)
Query: 82 EVFQSLKQDHVCNAIQPSHYLVNKLI------HRFKDDWKSALGIFRWAGSCPGYEHSSE 135
E+F+ + Q N P Y N +I +F+D + S L R G P S
Sbjct: 326 ELFEHMDQ----NKQVPCAYAYNTMIMGYGMAGKFEDAY-SLLERQRRKGCIP----SVV 376
Query: 136 IYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ LG+ Q+D+ EEM K I L+T ++ AG+ E A+ D +
Sbjct: 377 SYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMK 436
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKINRV 253
GL N T+N+++D LCK +++ A S+F L+ K+C P+A T+ I G + RV
Sbjct: 437 DAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTC-RPDAVTYCSLIEGLGRHGRV 495
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
DEA ++M P + Y+++I+++ + +++ +EM GC P+++ T
Sbjct: 496 DEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTY 555
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
M + K+G+ E+ + +++K +G PD+R + LI+ L +A EA ++ M E G
Sbjct: 556 MDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYT-MKEQG 614
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
DT +NT+I F G KA+ +LEEM H +P V T+ ++ K + DE
Sbjct: 615 CVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGH-EPTVVTYGSVIDGLAKIDRLDE- 672
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
+ +L + + L++ Y+ +I G + + + AYL+ +E++ +TP T +L
Sbjct: 673 -AYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLL 731
Query: 494 DE-VKQKHMYDA 504
D VK + + +A
Sbjct: 732 DALVKAEEISEA 743
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 190/415 (45%), Gaps = 41/415 (9%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +++ LG+ ++D+ L E+M I ++R F G+ ED + ++E+
Sbjct: 482 YCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEML 541
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVD 254
G + +N +D + K G++E R++F E+K+ P+A ++ I IHG K
Sbjct: 542 RLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAH 601
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA MK GC +Y+T+I +C+ +K Y+LL+EM+ +G P VVTY +V+
Sbjct: 602 EAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVI 661
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
LAK +EA + E+ K G + + ++ LI G+ R+ EA Y+ E+ + G+
Sbjct: 662 DGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEA-YLIMEELMQKGL 720
Query: 375 APDTSTFNTMITMFSH------------------------------HG-----HHEKAFH 399
P+ T+N ++ HG KAF
Sbjct: 721 TPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFV 780
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIH 459
+EM K + KPNV T+ ++ K G E L + K ++ D Y +I
Sbjct: 781 FWQEMQK-QGFKPNVFTYTTMISGLAKAGNIVEA-DTLFEKFKEKGGVA-DSAIYNAIIE 837
Query: 460 GLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
GL AN+ AY LF+E + +TC ++LD + + + A + AV+++
Sbjct: 838 GLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIVGAVLRE 892
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 104/422 (24%), Positives = 175/422 (41%), Gaps = 6/422 (1%)
Query: 86 SLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGI-FRWAGSCPGYEHSSEIYEMMVDIL 144
SL + N+++P L N I F K + F G Y M+ +L
Sbjct: 256 SLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVL 315
Query: 145 GKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSG-AGQWEDAVRTFDELGTFGLEKNT 203
K ++++ L E M + V M G AG++EDA + G +
Sbjct: 316 CKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSV 375
Query: 204 ETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
+ N +L L ++G+V+ A F E+K PN T+NI I CK +++ A M
Sbjct: 376 VSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKAGKLETALVVRDAM 435
Query: 264 KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF 323
K G P VI+ + ++ C+ + + + + C P+ VTY +++ L + G
Sbjct: 436 KDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRV 495
Query: 324 EEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNT 383
+EA ++ E+M P++ + LI + R ++ +Y EM G +PD NT
Sbjct: 496 DEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYN-EMLRLGCSPDLLLLNT 554
Query: 384 MITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVN 443
+ G EK + +E+ L P+ +++ L+ K G E L +
Sbjct: 555 YMDCVFKAGEIEKGRALFQEIKNLGFI-PDARSYTILIHGLVKAGFAHEAYE--LFYTMK 611
Query: 444 KHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYD 503
+ LD Y VI G C++ K AY L +EM P T ++D + + D
Sbjct: 612 EQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLD 671
Query: 504 AA 505
A
Sbjct: 672 EA 673
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 102/426 (23%), Positives = 182/426 (42%), Gaps = 43/426 (10%)
Query: 96 IQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRA 155
+ P+ LV ++ R KD +A+ FRWA H E Y ++ ++ + R+ + +
Sbjct: 93 LNPNPELVIGVLRRLKD-VNNAVNYFRWAERLTDRAHCREAYNSLLMVMARTRKFNCLEQ 151
Query: 156 LLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLC 214
+LEEMS G + NT +++ F + + +A + L+ L
Sbjct: 152 ILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALS 211
Query: 215 KEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI 273
+ ++F +++ N H F I + + RVD A + EMK + P V+
Sbjct: 212 TSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVV 271
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK-------------- 319
Y+ I + + ++ EM+A G + VTYT+++ L K
Sbjct: 272 LYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHM 331
Query: 320 ---------------------SGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRV 358
+G FE+A + E+ + G P +NC++ LGR +V
Sbjct: 332 DQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQV 391
Query: 359 QEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFH 418
EA+ ++ EM ++ + P+ ST+N MI M G E A V + M K PNV T +
Sbjct: 392 DEALKKFE-EMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAM-KDAGLFPNVITVN 448
Query: 419 PLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
++ K + D+ S + + ++ D TY +I GL R + + AY L+++M+
Sbjct: 449 IMVDRLCKAQRLDDACS--IFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQML 506
Query: 479 GHDITP 484
+ P
Sbjct: 507 DANQIP 512
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 119/241 (49%), Gaps = 2/241 (0%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G+E + Y ++D L K+ ++D+ L EE SKG + + + ++ F G+ ++A
Sbjct: 649 GHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEA 708
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHG 246
+EL GL N T N LLD L K ++ A F +K PN T++I IHG
Sbjct: 709 YLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHG 768
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
CKI + ++A QEM+ G P V +Y+T+I + N + L ++ + +G +
Sbjct: 769 LCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVAD 828
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
Y ++ L+ + +A R+ E+ ++ G ++ L+ +L +A +++A V
Sbjct: 829 SAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIVGA 888
Query: 367 V 367
V
Sbjct: 889 V 889
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 181/376 (48%), Gaps = 44/376 (11%)
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHT 239
AG +E A F+E+ L+ + T L+D LCK G+VE AR + L +PPN T
Sbjct: 580 AGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVT 639
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+N +HG CK R++EA ++EM GC P I+Y +++ + CR +L+ E++
Sbjct: 640 YNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELK 699
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
+ G P+ VTY ++ L KSG E+AI + E+M G PD +N LI +L +A ++
Sbjct: 700 SFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLE 759
Query: 360 EAVYVY--QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNK----------- 406
EA ++ P+ T++ +I G ++A +++EM +
Sbjct: 760 EARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIIT 819
Query: 407 --------------LEHCK-------------PNVQTFHPLLKSCFKTGKTDECLSQLLD 439
E C+ P+ TF L+ K G+TDE + D
Sbjct: 820 YNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEA-CNVFD 878
Query: 440 DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQ 498
DM+ ++ ++ TY ++++GLC+ +K E A+ + + M+ +TP T +++D K
Sbjct: 879 DMIAGGYVP-NVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKA 937
Query: 499 KHMYDAAEKIEAVMKK 514
H+ +A E + + +
Sbjct: 938 SHVDEALELLHGMASR 953
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 126/419 (30%), Positives = 199/419 (47%), Gaps = 52/419 (12%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKG---HIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++VD K ++D+ LL M S+G ++VT N+I + + +G+ A + FD
Sbjct: 433 YSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGE---AFQMFD 489
Query: 193 EL------------------GTFGL--------------EKNTETMNLLLDTLCKEGKVE 220
++ G F + +T N ++ L K G V
Sbjct: 490 DMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAFNCCINGLSKLGDVS 549
Query: 221 LARSVF---LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
A V+ LEL+ + P+ TFNI I G CK ++A +EM P V+++
Sbjct: 550 RALQVYNRMLELE--LVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGA 607
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+I C+ ++LD M G PPNVVTY ++ L KSG EEA + E+M G
Sbjct: 608 LIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSG 667
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKA 397
PDS + L+Y L RASR +A+ + E+ G PDT T+N ++ G E+A
Sbjct: 668 CVPDSITYGSLVYALCRASRTDDALQLVS-ELKSFGWDPDTVTYNILVDGLWKSGQTEQA 726
Query: 398 FHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSL--DITTYT 455
VLEEM H P+V T++ L+ S K G +E +L DM ++ ++ TY+
Sbjct: 727 ITVLEEMVGKGH-HPDVVTYNTLIDSLCKAGDLEEA-RRLHGDMSSRVSRCCVPNVVTYS 784
Query: 456 LVIHGLCRANKCEWAYLLFKEMIGH--DITPRYQTCRLILDEV-KQKHMYDAAEKIEAV 511
++I+GLC+ + + A L +EM+ D+ P T LD + KQ M +A E + ++
Sbjct: 785 VLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSL 843
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 171/361 (47%), Gaps = 45/361 (12%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAV 188
G++ + Y ++VD L K Q +Q +LEEM G G D V
Sbjct: 702 GWDPDTVTYNILVDGLWKSGQTEQAITVLEEM------------------VGKGHHPDVV 743
Query: 189 RTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS----CIPPNAHTFNIFI 244
T N L+D+LCK G +E AR + ++ S C PN T+++ I
Sbjct: 744 ----------------TYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLI 787
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCH--PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
+G CK+ R+DEA+ IQEM C P +I+Y++ + C+Q ++ EL+ ++
Sbjct: 788 NGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGS 847
Query: 303 --CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
P+ VT++T++ L K G +EA + + M G P+ +N L+ L + +++
Sbjct: 848 LRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMER 907
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
A + + M + GV PD T++ ++ F H ++A +L M C PNV TF+ +
Sbjct: 908 AHAMIE-SMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMAS-RGCTPNVVTFNSI 965
Query: 421 LKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH 480
+ K+ ++ E Q+ DDM KH L+ D TY +I GL R A +L M
Sbjct: 966 IDGLCKSDQSGEAF-QMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPDP 1024
Query: 481 D 481
D
Sbjct: 1025 D 1025
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 110/443 (24%), Positives = 197/443 (44%), Gaps = 54/443 (12%)
Query: 117 ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGH---IVTLNTIA 172
AL IFR + G + Y +++ L K ++ L EE+ +GH +VT NT+
Sbjct: 199 ALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLI 258
Query: 173 KVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--K 230
+ + AG E+A R ++ + N T ++L++ LCK G+++ AR + E+ K
Sbjct: 259 DSLCK---AGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRK 315
Query: 231 SC--------------------------------------IPPNAHTFNIFIHGWCKINR 252
SC + P+ TF+ I G CK +
Sbjct: 316 SCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQ 375
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
+DEA +M G P VI+Y+ ++ C+ + + +++ M +G P+V+TY+
Sbjct: 376 IDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSV 435
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN 372
++ K+ +EA+ + M G P+ FN +I L ++ R EA ++ ++
Sbjct: 436 LVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKH 495
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
G+ PD T+ T+I G +A +L+ M P+ F+ + K G
Sbjct: 496 GLVPDKITYCTLIDGLFRTGRAGQAEALLDAMP-----DPDTYAFNCCINGLSKLGDVSR 550
Query: 433 CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLI 492
L Q+ + M+ + L D T+ ++I G C+A E A LF+EM+ ++ P T +
Sbjct: 551 AL-QVYNRML-ELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGAL 608
Query: 493 LDEVKQKHMYDAAEKIEAVMKKL 515
+D + + +AA I +M L
Sbjct: 609 IDGLCKAGQVEAARDILDLMGNL 631
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 192/397 (48%), Gaps = 26/397 (6%)
Query: 113 DWKSALG--IFRWAGSCPGYEHSSEIYEMMVDILGK----VRQMDQMRALLEEMSKGHIV 166
D + LG + WA + PG++H+ + +++L K + +D R+ L + +
Sbjct: 88 DGNAELGTQFYDWAAALPGFKHTIFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHF 147
Query: 167 TLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETM----NLLLDTLCKEGKVELA 222
T +T+ + + G D RT LG F +++ N++L +LC+ G+ A
Sbjct: 148 TYSTLLRATYKAGG-----DVERT---LGFFRRIRSSSRSVADYNIVLQSLCRAGETARA 199
Query: 223 RSVFLE--LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQ 280
+F + + P T+N I+G CK N + +E+ G HP V++Y+T+I
Sbjct: 200 LEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLID 259
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM--KIVGS 338
S C+ + + L +M ++ C PNVVTY+ +++ L K G +EA + ++M K
Sbjct: 260 SLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDV 319
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQ-VEMPENGVAPDTSTFNTMITMFSHHGHHEKA 397
P+ +N + L + S EA + + + V+PDT TF+T+I G ++A
Sbjct: 320 LPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEA 379
Query: 398 FHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLV 457
V ++M + PNV T++ L+ K K + +++ MV+K ++ D+ TY+++
Sbjct: 380 CSVFDDMIAGGYV-PNVITYNALVNGLCKADKMERA-HAMIESMVDK-GVTPDVITYSVL 436
Query: 458 IHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
+ C+A++ + A L M TP T I+D
Sbjct: 437 VDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIID 473
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 109/234 (46%), Gaps = 10/234 (4%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
GY + Y ++++ L K +M++ A++E M KG + T + ++ F A ++A
Sbjct: 884 GYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEA 943
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIH 245
+ + + G N T N ++D LCK + A +F + LK + P+ T+ I
Sbjct: 944 LELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLID 1003
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G + +A+ + M P +++ I + + S+ + E++ P
Sbjct: 1004 GLFRTGWAGQAEVLLDAMP----DPDTYAFNCCINGLSKLGDVSRALHRMLELELV---P 1056
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
+ VT+ +++ K+G+FE+A + E+M +PD F LI L +A +V+
Sbjct: 1057 DKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVE 1110
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 70/164 (42%), Gaps = 14/164 (8%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGH-----IVTLNTIAKVMRRFSGAGQWEDAVRTF 191
+ ++D L K Q + + ++M+ H +T T+ + R AGQ E +
Sbjct: 962 FNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAM 1021
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKIN 251
+ T+ N ++ L K G V A LEL+ + P+ TFNI I G CK
Sbjct: 1022 PDPDTYAF-------NCCINGLSKLGDVSRALHRMLELE--LVPDKVTFNILIAGACKAG 1072
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
++A +EM P V+++ +I C+ ++++
Sbjct: 1073 NFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEATWDIM 1116
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 33/169 (19%), Positives = 76/169 (44%), Gaps = 6/169 (3%)
Query: 345 FNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMI-TMFSHHGHHEKAFHVLEE 403
FN + L ++ +A+ +++ +P P+ T++T++ + G E+
Sbjct: 114 FNKYLNLLVKSGSPAKAIDLFRSRLPPR-CRPNHFTYSTLLRATYKAGGDVERTLGFFRR 172
Query: 404 MNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCR 463
+ +V ++ +L+S + G+T L +M + ++ I TY +I+GLC+
Sbjct: 173 IRSSSR---SVADYNIVLQSLCRAGETARALEIFRGEMA-RDGVAPTIVTYNTIINGLCK 228
Query: 464 ANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
+N+ LF+E++ P T ++D + + + A ++ M
Sbjct: 229 SNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDM 277
>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 806
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/465 (25%), Positives = 219/465 (47%), Gaps = 69/465 (14%)
Query: 107 IHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIV 166
+ R + D S+L F+ + ++H+ YE M+D LG+ +MD + LL++M ++
Sbjct: 47 VLRQEHDIVSSLEYFKSLSNSGTFKHTHLTYETMIDKLGRNNEMDGVSYLLQQMKLENVP 106
Query: 167 TLNTIAK-VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSV 225
+ + V++ + + E ++ F + FG E + + NL+LD L + ++ ++
Sbjct: 107 CSQELFQFVIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLSQNLFKMINAL 166
Query: 226 FLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCR 284
+ +KS + PN T+N+ + C+ +VD A + EM GC P +SY+T+I S C+
Sbjct: 167 YNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCK 226
Query: 285 Q-------------------YN-----------FSKVYELLDEMQAQGCPPNVVTYTTVM 314
YN F + ++L++EM +G PNV++Y+TV+
Sbjct: 227 LGDVDKARELAMKFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVI 286
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
S L+ G+ E ++ + +M + G +P+ + F LI RV +AV ++ + + E GV
Sbjct: 287 SCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIRE-GV 345
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG------ 428
+P+ +NT+I G+ ++A V +M K + +PNV T+ ++ K+G
Sbjct: 346 SPNVVAYNTLIHGLCSDGNMDEAISVWNQMEK-DSIRPNVTTYSTIIYGFAKSGDLVSAC 404
Query: 429 ----KTDEC---------------LSQ---------LLDDMVNKHHLSLDITTYTLVIHG 460
K C L Q L+D+M++ + T+ I G
Sbjct: 405 ETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMIS-DGCPPTVITFNNFIKG 463
Query: 461 LCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
LCRA + EWA + +M ++ P +T +LD + + + + A
Sbjct: 464 LCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREA 508
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 181/359 (50%), Gaps = 5/359 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ L + ++ A+ M +G + T +++ F G+ DAV ++ +
Sbjct: 282 YSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMI 341
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
G+ N N L+ LC +G ++ A SV+ ++ K I PN T++ I+G+ K +
Sbjct: 342 REGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLV 401
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
A T +M GC P V+ Y+ ++ C+ F + ++L+D M + GCPP V+T+ +
Sbjct: 402 SACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFI 461
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
L ++G E A+ + ++M+ P+ R +N L+ L RA+ +EA + + E+ E V
Sbjct: 462 KGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIR-ELEERKV 520
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
D T+NT++ FS +G H++ +L +M + K + T + + + K GK +
Sbjct: 521 EFDCVTYNTIMYGFSFNGMHQQVLQLLGKM-LVNGIKLDTITVNTTVNAYCKLGKVKTAI 579
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
++LD++ + DI T+T+++ G+C E A + EM+ I P T +++
Sbjct: 580 -KVLDNISAEKEFRADIITHTIILWGICNWLGTEEAVVYLHEMLKRGIFPNIATWNVLV 637
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 75/168 (44%), Gaps = 9/168 (5%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++D L + + L+ E+ + + VT NTI M FS G + ++
Sbjct: 492 YNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTI---MYGFSFNGMHQQVLQLLG 548
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKI 250
++ G++ +T T+N ++ CK GKV+ A V + + + T I + G C
Sbjct: 549 KMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFRADIITHTIILWGICNW 608
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
+EA + EM G P + +++ +++ + + +LD++
Sbjct: 609 LGTEEAVVYLHEMLKRGIFPNIATWNVLVRGFFSKLGHMGPIRILDDI 656
>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 121/476 (25%), Positives = 207/476 (43%), Gaps = 73/476 (15%)
Query: 106 LIHRFKDD--WKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKG 163
++ R K D S LG F + ++H++ Y +M++ LG+ +MD ++ +L++M
Sbjct: 44 VLKRLKTDRNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMD 103
Query: 164 HI-VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELA 222
I + ++ + G E A++ F +G FG + N LLD L E K ++
Sbjct: 104 GINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMI 163
Query: 223 RSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQS 281
++ + K + PN T+NI + CK +RVD A EM GC P ++Y+T++ S
Sbjct: 164 NPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSS 223
Query: 282 YCRQYNFSKVYE------------------------------LLDEMQAQGCPPNVVTYT 311
C+ E LL EM G PNVV+Y+
Sbjct: 224 LCKAGKIDDARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYS 283
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
+++ L SG+ E A + +M + G + F LI ++ EA+ ++++ M +
Sbjct: 284 CIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKL-MIQ 342
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK-- 429
+G P+ +NT+I +G E+A V ++M + C PNV T+ L+ K+G
Sbjct: 343 DGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQR-SGCLPNVTTYSILIDGFAKSGDLV 401
Query: 430 -------------------TDECLSQLL---------DDMVNKHHL---SLDITTYTLVI 458
T C+ +L + +V K L + + T+ I
Sbjct: 402 GASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFI 461
Query: 459 HGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA----EKIEA 510
GLC + EWA L + M GH P T +LD + + + Y+ A ++IEA
Sbjct: 462 KGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEA 517
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 120/436 (27%), Positives = 201/436 (46%), Gaps = 19/436 (4%)
Query: 81 DEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMM 140
+ ++ ++K+D + + + L+ L + D L + CP + Y M
Sbjct: 164 NPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCP---PDAVTYTTM 220
Query: 141 VDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLE 200
V L K ++D R L K + N + M + G+ E A++ E+ G++
Sbjct: 221 VSSLCKAGKIDDARELAGRF-KPSVPVYNALIDGMCK---EGRIEVAIKLLGEMMDNGVD 276
Query: 201 KNTETMNLLLDTLCKEGKVELARSVFLE--LKSCIPPNAHTFNIFIHGWCKINRVDEAQW 258
N + + ++++LC G VELA ++F + L+ C N HTF I G ++ EA
Sbjct: 277 PNVVSYSCIINSLCVSGNVELAFALFAQMFLRGC-DANIHTFTPLIKGCFMRGKLYEALD 335
Query: 259 TIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLA 318
+ M GC P V++Y+T+I C + + ++ D+MQ GC PNV TY+ ++ A
Sbjct: 336 LWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFA 395
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDT 378
KSGD A +M G +P+ + C++ L + S +A + + +M G P+T
Sbjct: 396 KSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVE-KMTLEGCTPNT 454
Query: 379 STFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLL 438
TFNT I +G E A +LE M C PN+ T++ LL + F+ K +E L
Sbjct: 455 ITFNTFIKGLCGNGRVEWAMKLLERMQG-HGCLPNITTYNELLDALFRMNKYEEAFG--L 511
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP---RYQTCRLILDE 495
+ +L ++ TY V++G RA A LF + + P Y T +I
Sbjct: 512 FQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNT--MIHAY 569
Query: 496 VKQKHMYDAAEKIEAV 511
KQ + AA+ +E V
Sbjct: 570 CKQGKVKIAAQLVERV 585
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 158/319 (49%), Gaps = 6/319 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
G E + Y ++ L +++ + ++M + G + + T + ++ F+ +G A
Sbjct: 344 GCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGA 403
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIH 245
T++ + + G N T ++D LCK + A S+ + L+ C P N TFN FI
Sbjct: 404 SETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTP-NTITFNTFIK 462
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G C RV+ A ++ M+GHGC P + +Y+ ++ + R + + + L E++A+ P
Sbjct: 463 GLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQP 522
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N+VTY TV+ +++G EA+++ K + G+ PDS +N +I+ + +V+ A +
Sbjct: 523 NLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLV 582
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
+ PD T+ ++I + + E+A L++ C PN T++ L++ CF
Sbjct: 583 ERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGIC-PNFATWNALVR-CF 640
Query: 426 KTGKTDECLSQLLDDMVNK 444
+LDD++ K
Sbjct: 641 FDSLGHMGPIHILDDILRK 659
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 81/172 (47%), Gaps = 9/172 (5%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++D L ++ + ++ L +E+ + ++VT NT V+ FS AG +A++ F
Sbjct: 492 YNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNT---VLYGFSRAGMMGEALQLFG 548
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIP--PNAHTFNIFIHGWCKI 250
+ G ++ T N ++ CK+GKV++A + + S P+ T+ I G C
Sbjct: 549 KALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNW 608
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
++EA + + G P +++ +++ + +LD++ +G
Sbjct: 609 MNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGPIHILDDILRKG 660
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 75/169 (44%), Gaps = 4/169 (2%)
Query: 345 FNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
+ +I LGR + Y+ Q +M +G+ F +I + G E+A + +
Sbjct: 77 YRVMIERLGRECEMDMVQYILQ-QMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRI 135
Query: 405 NKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRA 464
+ CKP V+ ++ LL + K + ++ L +M K L ++ TY +++ LC+
Sbjct: 136 GEF-GCKPTVRIYNHLLDALLSENKF-QMINPLYTNM-KKDGLIPNVFTYNILLKALCKN 192
Query: 465 NKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
++ + A+ LF EM P T ++ + + D A ++ K
Sbjct: 193 DRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFK 241
>gi|225461528|ref|XP_002282646.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Vitis vinifera]
Length = 546
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/424 (26%), Positives = 197/424 (46%), Gaps = 15/424 (3%)
Query: 73 KVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSC---PG 129
K + SS E+ +L H C + + LV ++ R + DW+ A F WA C G
Sbjct: 95 KTYRDSSVSEIEGAL---HQCR-LSLTDDLVLDVLKRHRSDWRPAYVFFNWASRCGIESG 150
Query: 130 YEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGH-IVTLNTIAKVMRRFSGAGQWEDAV 188
Y ++ ++DILG++R+ +M L +EMSK +V T ++ R++ A + E+AV
Sbjct: 151 YSPGCGVHNEILDILGRMRRFHEMTQLFDEMSKRKGLVNERTFGVLLNRYAAAHKTEEAV 210
Query: 189 RTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWC 248
+ F++ G E + LL +LC+ VE+A +F K+ PP+ + N+ ++GWC
Sbjct: 211 KIFNKRKGLGFELDLIAFQTLLMSLCRYKHVEMAEFLFHSKKNEFPPDIKSMNVILNGWC 270
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
+ + EA+ ++ C P +Y I S + S +L M +GC P+V
Sbjct: 271 VLGSLREAKRFWNDIITSKCKPDKFTYGIFINSLTKAGKLSTAVKLFQAMWEKGCNPDVA 330
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
++ L EA+ + +M +PD +N LI L + R E VY +
Sbjct: 331 ICNCIIDALCFKKRIPEALEVLREMNERDCQPDVATYNSLIKHLCKIQRF-EKVYELLDD 389
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M + G P+ T+ ++ E+ +LE M + C+ N ++ +LK G
Sbjct: 390 MEQKGCLPNARTYGYLL---KSTKKPEEVPGILERMER-NGCRMNSDCYNLILKLYMDWG 445
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ S L D + ++ + D TYT++IHGL + + A FK+M + P +T
Sbjct: 446 YELKLRSTL--DEMERNGMGPDQRTYTIMIHGLYDKGRMDDALSYFKQMTLMGMVPEPRT 503
Query: 489 CRLI 492
L+
Sbjct: 504 TLLV 507
>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 121/476 (25%), Positives = 207/476 (43%), Gaps = 73/476 (15%)
Query: 106 LIHRFKDD--WKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKG 163
++ R K D S LG F + ++H++ Y +M++ LG+ +MD ++ +L++M
Sbjct: 44 VLKRLKTDRNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMD 103
Query: 164 HI-VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELA 222
I + ++ + G E A++ F +G FG + N LLD L E K ++
Sbjct: 104 GINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMI 163
Query: 223 RSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQS 281
++ + K + PN T+NI + CK +RVD A EM GC P ++Y+T++ S
Sbjct: 164 NPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSS 223
Query: 282 YCRQYNFSKVYE------------------------------LLDEMQAQGCPPNVVTYT 311
C+ E LL EM G PNVV+Y+
Sbjct: 224 LCKAGKIDDARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYS 283
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
+++ L SG+ E A + +M + G + F LI ++ EA+ ++++ M +
Sbjct: 284 CIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKL-MIQ 342
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK-- 429
+G P+ +NT+I +G E+A V ++M + C PNV T+ L+ K+G
Sbjct: 343 DGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQR-SGCLPNVTTYSILIDGFAKSGDLV 401
Query: 430 -------------------TDECLSQLL---------DDMVNKHHL---SLDITTYTLVI 458
T C+ +L + +V K L + + T+ I
Sbjct: 402 GASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFI 461
Query: 459 HGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA----EKIEA 510
GLC + EWA L + M GH P T +LD + + + Y+ A ++IEA
Sbjct: 462 KGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEA 517
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 120/436 (27%), Positives = 201/436 (46%), Gaps = 19/436 (4%)
Query: 81 DEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMM 140
+ ++ ++K+D + + + L+ L + D L + CP + Y M
Sbjct: 164 NPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCP---PDAVTYTTM 220
Query: 141 VDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLE 200
V L K ++D R L K + N + M + G+ E A++ E+ G++
Sbjct: 221 VSSLCKAGKIDDARELAGRF-KPSVPVYNALIDGMCK---EGRIEVAIKLLGEMMDNGVD 276
Query: 201 KNTETMNLLLDTLCKEGKVELARSVFLE--LKSCIPPNAHTFNIFIHGWCKINRVDEAQW 258
N + + ++++LC G VELA ++F + L+ C N HTF I G ++ EA
Sbjct: 277 PNVVSYSCIINSLCVSGNVELAFALFAQMFLRGC-DANIHTFTPLIKGCFMRGKLYEALD 335
Query: 259 TIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLA 318
+ M GC P V++Y+T+I C + + ++ D+MQ GC PNV TY+ ++ A
Sbjct: 336 LWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFA 395
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDT 378
KSGD A +M G +P+ + C++ L + S +A + + +M G P+T
Sbjct: 396 KSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVE-KMTLEGCTPNT 454
Query: 379 STFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLL 438
TFNT I +G E A +LE M C PN+ T++ LL + F+ K +E L
Sbjct: 455 MTFNTFIKGLCGNGRVEWAMKLLERMQG-HGCLPNITTYNELLDALFRMNKYEEAFG--L 511
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP---RYQTCRLILDE 495
+ +L ++ TY V++G RA A LF + + P Y T +I
Sbjct: 512 FQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNT--MIHAY 569
Query: 496 VKQKHMYDAAEKIEAV 511
KQ + AA+ +E V
Sbjct: 570 CKQGKVKIAAQLVERV 585
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 158/319 (49%), Gaps = 6/319 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
G E + Y ++ L +++ + ++M + G + + T + ++ F+ +G A
Sbjct: 344 GCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGA 403
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIH 245
T++ + + G N T ++D LCK + A S+ + L+ C P N TFN FI
Sbjct: 404 SETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTP-NTMTFNTFIK 462
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G C RV+ A ++ M+GHGC P + +Y+ ++ + R + + + L E++A+ P
Sbjct: 463 GLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQP 522
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N+VTY TV+ +++G EA+++ K + G+ PDS +N +I+ + +V+ A +
Sbjct: 523 NLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLV 582
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
+ PD T+ ++I + + E+A L++ C PN T++ L++ CF
Sbjct: 583 ERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGIC-PNFATWNALVR-CF 640
Query: 426 KTGKTDECLSQLLDDMVNK 444
+LDD++ K
Sbjct: 641 FDSLGHMGPIHILDDILRK 659
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 81/172 (47%), Gaps = 9/172 (5%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++D L ++ + ++ L +E+ + ++VT NT V+ FS AG +A++ F
Sbjct: 492 YNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNT---VLYGFSRAGMMGEALQLFG 548
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIP--PNAHTFNIFIHGWCKI 250
+ G ++ T N ++ CK+GKV++A + + S P+ T+ I G C
Sbjct: 549 KALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNW 608
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
++EA + + G P +++ +++ + +LD++ +G
Sbjct: 609 MNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGPIHILDDILRKG 660
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 75/169 (44%), Gaps = 4/169 (2%)
Query: 345 FNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
+ +I LGR + Y+ Q +M +G+ F +I + G E+A + +
Sbjct: 77 YRVMIERLGRECEMDMVQYILQ-QMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRI 135
Query: 405 NKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRA 464
+ CKP V+ ++ LL + K + ++ L +M K L ++ TY +++ LC+
Sbjct: 136 GEF-GCKPTVRIYNHLLDALLSENKF-QMINPLYTNM-KKDGLIPNVFTYNILLKALCKN 192
Query: 465 NKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
++ + A+ LF EM P T ++ + + D A ++ K
Sbjct: 193 DRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFK 241
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 190/372 (51%), Gaps = 11/372 (2%)
Query: 143 ILGKVRQMDQMR---ALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGL 199
++G + + ++R + +M+ H T K++ S A + DAV+ E+ +
Sbjct: 11 VIGGLCRAGRLRHALGVYRQMNDAHPPDFLTYTKLVHGLSKARRLRDAVQVLQEMVSARH 70
Query: 200 EKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQW 258
+ T+ +++ +LC +V+ AR + E L + NA T++ + G CK R+DEA
Sbjct: 71 VPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVA 130
Query: 259 TIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLA 318
++ M GC P V++Y++II +CR + + +++M A+GC P+++TYT ++
Sbjct: 131 LVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFC 190
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDT 378
KS D + + ++ G PD ++ +I L +A R+++AV +++ E AP
Sbjct: 191 KSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFE----EMSCAPTA 246
Query: 379 STFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLL 438
T+N++I + G ++A +L +M + C P+V T+ L+ + K G+ D+ +L
Sbjct: 247 ITYNSLIGGYCRAGDMDEAIRLLGKMVD-DKCAPDVVTYTTLMSAFCKMGRLDDAY-ELF 304
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQ 498
MV + LS D+ T+T ++ GLC + E A L +E+ P T ++D +
Sbjct: 305 QQMV-ANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCK 363
Query: 499 KHMYDAAEKIEA 510
+ AE++ A
Sbjct: 364 ANQVRKAEELVA 375
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 194/379 (51%), Gaps = 7/379 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ + R++D+ +E+M ++G + T ++ F + + E+
Sbjct: 147 YNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVT 206
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDE 255
G + T + ++D LCK G++ A +F E+ SC P A T+N I G+C+ +DE
Sbjct: 207 RRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM-SC-APTAITYNSLIGGYCRAGDMDE 264
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
A + +M C P V++Y+T++ ++C+ YEL +M A P+VVT+T+++
Sbjct: 265 AIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVD 324
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
L G E+A+ + E++ G P +NC++ +A++V++A + + G
Sbjct: 325 GLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELV-ADFRSRGFV 383
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMN-KLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
P+T T+N ++ G ++A L+++N + C +V + +L + + G+TD+ +
Sbjct: 384 PNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAV 443
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
Q ++M+ + ++ T+ V+ LC+A++ + A+ L +EMI + TP TC ++
Sbjct: 444 -QFYEEMIQRGYVPA-AATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVS 501
Query: 495 EVKQKHMYDAAEKIEAVMK 513
+ M A+++ + ++
Sbjct: 502 AYCRAGMIQKADELASELR 520
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/447 (25%), Positives = 198/447 (44%), Gaps = 79/447 (17%)
Query: 114 WKSALGIFRWAGSCPGYEHSSEI--YEMMVDILGKVRQM-DQMRALLEEMSKGHIVTLNT 170
+ ALG++R H + Y +V L K R++ D ++ L E +S H+ T
Sbjct: 21 LRHALGVYRQMND----AHPPDFLTYTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNTT 76
Query: 171 IAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LE 228
+ V++ + +DA +E+ G+ N T + L+D LCK +++ A ++ +
Sbjct: 77 LTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMA 136
Query: 229 LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
+ C P T+N I G+C+ RVDEA +++M GCHP +I+Y+ +I +C+ +
Sbjct: 137 ERGC-APTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDV 195
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSG--------------------------- 321
+ ELL E+ +G P++VTY+TV+ L K+G
Sbjct: 196 GRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAITYNSLIGG 255
Query: 322 -----DFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
D +EAIR+ KM PD + L+ + R+ +A ++Q +M N ++P
Sbjct: 256 YCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQ-QMVANKLSP 314
Query: 377 DTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE--------------HCK----------- 411
D TF +++ G E A +LEE+ + +CK
Sbjct: 315 DVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELV 374
Query: 412 ---------PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHH-LSLDITTYTLVIHGL 461
PN T++ L+ C + G+TD+ L Q LD + ++ + Y +++ L
Sbjct: 375 ADFRSRGFVPNTVTYNILVAGCCRAGRTDQAL-QYLDQLNSEGGPCPTSVAMYAIILDAL 433
Query: 462 CRANKCEWAYLLFKEMIGHDITPRYQT 488
CR + + A ++EMI P T
Sbjct: 434 CRDGRTDDAVQFYEEMIQRGYVPAAAT 460
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 98/211 (46%), Gaps = 6/211 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
+ +VD L +M+ LLEE+++ G T+ T V+ + A Q A +
Sbjct: 319 FTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFR 378
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS----CIPPNAHTFNIFIHGWCKIN 251
+ G NT T N+L+ C+ G+ + A +L S C P + + I + C+
Sbjct: 379 SRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPC-PTSVAMYAIILDALCRDG 437
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
R D+A +EM G P +++T++ + C+ + + +ELL+EM G P T
Sbjct: 438 RTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCD 497
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDS 342
V+S ++G ++A + ++++ K S
Sbjct: 498 AVVSAYCRAGMIQKADELASELRLYTDKSSS 528
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 5/140 (3%)
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS 435
P T N +I G A V +MN P+ T+ L+ K + + +
Sbjct: 3 PGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH--PPDFLTYTKLVHGLSKARRLRDAV- 59
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE 495
Q+L +MV+ H+ D TT T+V+ LC ++ + A L +EM+ + T ++D
Sbjct: 60 QVLQEMVSARHVP-DNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDG 118
Query: 496 V-KQKHMYDAAEKIEAVMKK 514
+ K + + +A +E + ++
Sbjct: 119 LCKCERLDEAVALVETMAER 138
>gi|357442157|ref|XP_003591356.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480404|gb|AES61607.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 518
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 126/442 (28%), Positives = 210/442 (47%), Gaps = 27/442 (6%)
Query: 85 QSLKQDHVCNAIQPSHYLVNKLIHRFK---DDWKSALGIFRWAGSCPGYEHSSEIYEMMV 141
++LKQ I S+ L+++++ R + + L FR+ G G+ H++ + M+
Sbjct: 42 ETLKQSLKSTQIFLSNELIDQVLKRVRFGHANPNQTLEFFRYTGRRKGFYHTAYSLDTML 101
Query: 142 DILGKVRQMDQMRALLEEMSKG--HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGL 199
ILG+ R D + LL E + +++T T+ V+ R + V TF +
Sbjct: 102 YILGRSRMFDHVWELLIEARRKDQNVITPRTVMVVLGRVAKVCSVRQTVETFRKFKKIVP 161
Query: 200 EKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWT 259
+ N LL TLC+E + AR+V+ LK PN TFNI + GW V++A+
Sbjct: 162 DYGVNCFNALLRTLCQEKSMTDARNVYHSLKHNFRPNLQTFNILLSGW---KNVEDAELF 218
Query: 260 IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK 319
+ EMK G P V++Y++++ YC+ K Y++ DEM+ + P+V+TYT+V+ L
Sbjct: 219 VNEMKEMGVEPDVVTYNSLVDVYCKGREIEKAYKVFDEMREKDLSPDVITYTSVIGGLGL 278
Query: 320 SGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTS 379
G ++A + ++MK G PD +N I A R+ A + EM G++P+ +
Sbjct: 279 VGQPDKARDVLKEMKEYGVYPDVPAYNAAIRNYCIAKRLGIAFELVD-EMVNKGLSPNAT 337
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLD 439
T+N +F + ++++ + M E C P Q+ L++ FK + E QL
Sbjct: 338 TYNLFFRVFYWSNDLQSSWNLYKRMMG-EGCLPYTQSCMFLIR-LFKRHEKMEMALQLWG 395
Query: 440 DMVNKHHLSLDITTYTLV----IHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLI--L 493
+MV K +YTLV LC K A F EMI P + + I L
Sbjct: 396 EMVEK-----GFGSYTLVSDVLFDMLCDMGKLMEAEKCFLEMIEKGQRPSNVSFKRIKVL 450
Query: 494 DEVKQKHMYDAAEKIEAVMKKL 515
E+ KH E I+ + +K+
Sbjct: 451 MELANKH-----EAIQNLTQKM 467
>gi|12320851|gb|AAG50561.1|AC073506_3 hypothetical protein [Arabidopsis thaliana]
Length = 802
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 121/438 (27%), Positives = 210/438 (47%), Gaps = 27/438 (6%)
Query: 83 VFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVD 142
+ +SLK VC + R +DD + AL F WA Y H +Y M++
Sbjct: 168 LLRSLKPSQVCAVL------------RSQDDERVALKFFYWADRQWRYRHDPMVYYSMLE 215
Query: 143 ILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEK 201
+L K + R +L M +G T ++VM +S AGQ DA++ + G+E
Sbjct: 216 VLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEP 275
Query: 202 NTETMNLLLDTLCKEGKVELARSVFLELKSC--IPPNAHTFNIFIHGWCKINRVDEAQWT 259
N N +D + ++E A FLE I PN T+N I G+C ++RV+EA
Sbjct: 276 NLLICNTTIDVFVRANRLEKALR-FLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIEL 334
Query: 260 IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ-GCPPNVVTYTTVMSYLA 318
+++M GC P +SY TI+ C++ +V +L+ +M + G P+ VTY T++ L
Sbjct: 335 LEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLT 394
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV-YVYQVEMPENGVAPD 377
K +EA+ + + G + D ++ +++ L + R+ EA + +++ P PD
Sbjct: 395 KHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMDCP-----PD 449
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
T+ ++ F G +KA +L+ M+ H KPN ++ LL +TGK+ E +
Sbjct: 450 VVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGH-KPNTVSYTALLNGMCRTGKSLEAREMM 508
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV- 496
+M +H S + TY++++HGL R K A + +EM+ P L+L +
Sbjct: 509 --NMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLC 566
Query: 497 KQKHMYDAAEKIEAVMKK 514
+ ++A + +E + K
Sbjct: 567 RDGRTHEARKFMEECLNK 584
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 180/370 (48%), Gaps = 24/370 (6%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGH-----IVTLNTIAKVMRRFSGAGQWEDAVRTF 191
Y ++ L K +++ ++R L+++M+K H VT NT+ ++ + A ++A+
Sbjct: 350 YYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHA---DEALWFL 406
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKIN 251
+ G + + ++ LCKEG++ A+ + E+ C PP+ T+ ++G+C++
Sbjct: 407 KDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEM-DC-PPDVVTYTAVVNGFCRLG 464
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
VD+A+ +Q M HG P +SY+ ++ CR + E+++ + PN +TY+
Sbjct: 465 EVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYS 524
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
+M L + G EA + +M + G P N L+ +L R R EA + E
Sbjct: 525 VIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEA-RKFMEECLN 583
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
G A + F T+I F + + A VL++M L + +V T+ L+ + K G+
Sbjct: 584 KGCAINVVNFTTVIHGFCQNDELDAALSVLDDMY-LINKHADVFTYTTLVDTLGKKGRIA 642
Query: 432 ECLSQLLDDMVNKHHLSLDIT--TYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTC 489
E ++L+ M+ H +D T TY VIH C+ K + + ++MI Q C
Sbjct: 643 EA-TELMKKML---HKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISR------QKC 692
Query: 490 RLILDEVKQK 499
R I ++V +K
Sbjct: 693 RTIYNQVIEK 702
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 87/212 (41%), Gaps = 4/212 (1%)
Query: 152 QMRALLEE-MSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLL 210
+ R +EE ++KG + + V+ F + + A+ D++ + T L+
Sbjct: 573 EARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLV 632
Query: 211 DTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCH 269
DTL K+G++ A + + L I P T+ IH +C++ +VD+ +++M
Sbjct: 633 DTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISR--Q 690
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI 329
C Y+ +I+ C + LL ++ + T +M K G A ++
Sbjct: 691 KCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKV 750
Query: 330 TEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
+M PD + L L +V EA
Sbjct: 751 ACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEA 782
>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Vitis vinifera]
Length = 898
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 121/431 (28%), Positives = 212/431 (49%), Gaps = 21/431 (4%)
Query: 82 EVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWK--SALGIF---RWAGSCPGYEHSSEI 136
E+F+ L+Q N P Y N +I + K A G+ + GS P S
Sbjct: 321 ELFEQLEQ----NRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIP----SVIA 372
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGT 196
Y ++ LGK R++++ + EEM + + + T ++ G+ A+ D++
Sbjct: 373 YNCILTCLGKKRRVEEALRIFEEMKRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMER 432
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKINRVD 254
GL N T+N+++D LCK K+E A S+F ++ K C P NA TF+ I G K RVD
Sbjct: 433 AGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTP-NAVTFSSLIDGLGKCGRVD 491
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
+A ++M G P I Y+++I+S+ + +++ EM GC P++ T M
Sbjct: 492 DAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYM 551
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
+ K+G+ E+ + ++ G PD+R ++ LI+ L +A E ++ M E G
Sbjct: 552 DCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYA-MKEQGC 610
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
DT +N +I F G KA+ +LEEM K++ P V T+ ++ K + DE
Sbjct: 611 VLDTHAYNAVIDGFCKSGKVNKAYQLLEEM-KVKGHPPTVVTYGSVIDGLAKIDRLDE-- 667
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
+ +L + + + L++ Y+ +I G + + + AYL+ +E++ +TP T +LD
Sbjct: 668 AYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLD 727
Query: 495 E-VKQKHMYDA 504
VK + + +A
Sbjct: 728 ALVKAEEINEA 738
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/415 (27%), Positives = 185/415 (44%), Gaps = 41/415 (9%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
+ ++D LGK ++D +L E+M GH+ ++R F G+ ED + + E+
Sbjct: 477 FSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMV 536
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVD 254
G + +N +D + K G+ E R++F E+ + P+A +++I IHG K +
Sbjct: 537 HTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLAN 596
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
E MK GC +Y+ +I +C+ +K Y+LL+EM+ +G PP VVTY +V+
Sbjct: 597 ETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVI 656
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
LAK +EA + E+ K G K + ++ LI G+ R+ EA Y+ E+ + G+
Sbjct: 657 DGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEA-YLIMEELMQKGL 715
Query: 375 APDTSTFN-----------------------------------TMITMFSHHGHHEKAFH 399
P+ T+N +I KAF
Sbjct: 716 TPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFV 775
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIH 459
+EM KL KPN T+ ++ K G E S L + D +Y +I
Sbjct: 776 FWQEMQKL-GLKPNTITYTTMISGLAKAGNILEA-SGLFSRFKANGGIP-DSASYNAMIE 832
Query: 460 GLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
GL ANK AY LF+E +TC ++LD + + + A + AV+K+
Sbjct: 833 GLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAECLEQAAIVGAVLKE 887
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/425 (24%), Positives = 195/425 (45%), Gaps = 49/425 (11%)
Query: 97 QPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRAL 156
+P LV ++ R KD +A+ F+WA H E Y ++ ++ + + D + +
Sbjct: 89 KPLPELVIGVLKRLKD-ANTAVNYFQWAEKQTEKVHCPEAYNSLLMVMARNTEFDHLERI 147
Query: 157 LEEMSKGHI-----VTLNTIA---------------KVMRRF----------------SG 180
LEEMS +++ +A + MR+F S
Sbjct: 148 LEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGALSE 207
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHT 239
+ + + F ++ G E N L+ +EG+V+ A S+ E+KS + +
Sbjct: 208 VREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVL 267
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+N+ I + K +VD + EMK HG P ++Y+++I C+ + EL ++++
Sbjct: 268 YNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLE 327
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
P Y T++ +G F+EA + E+ K GS P +NC++ LG+ RV+
Sbjct: 328 QNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVE 387
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
EA+ +++ EM + V P+ T+N +I M G A + ++M + PNV T +
Sbjct: 388 EALRIFE-EMKRDAV-PNVPTYNILIDMLCREGKLNAALEIRDDMER-AGLFPNVLTVNI 444
Query: 420 LLKSCFKTGKTDECLS--QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
++ K K +E S + +DD V + + T++ +I GL + + + AY L+++M
Sbjct: 445 MIDRLCKAQKLEEACSIFEGMDDKV----CTPNAVTFSSLIDGLGKCGRVDDAYSLYEKM 500
Query: 478 I--GH 480
+ GH
Sbjct: 501 LDCGH 505
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 163/370 (44%), Gaps = 5/370 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVM-RRFSGAGQWEDAVRTFDELG 195
Y M+ +L K ++D+ L E++ + V M + AG++++A +
Sbjct: 303 YTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQK 362
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDE 255
G + N +L L K+ +VE A +F E+K PN T+NI I C+ +++
Sbjct: 363 AKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPNVPTYNILIDMLCREGKLNA 422
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
A +M+ G P V++ + +I C+ + + + M + C PN VT+++++
Sbjct: 423 ALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLID 482
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
L K G ++A + EKM G P + + LI + + R ++ +Y+ EM G +
Sbjct: 483 GLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYK-EMVHTGCS 541
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS 435
PD + NT + G EK + E+N P+ +++ L+ K G +E
Sbjct: 542 PDLTLINTYMDCVFKAGETEKGRALFREINA-HGFIPDARSYSILIHGLVKAGLANETYE 600
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE 495
+ + LD Y VI G C++ K AY L +EM P T ++D
Sbjct: 601 LFY--AMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDG 658
Query: 496 VKQKHMYDAA 505
+ + D A
Sbjct: 659 LAKIDRLDEA 668
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 166/347 (47%), Gaps = 11/347 (3%)
Query: 31 NCSH----IVSSSPIESYCSDGARLDHHQVL--CVDSPRLPDIDVIISKVH--VGSSEDE 82
+C H IV +S I S+ G + D H++ V + PD+ +I + + + E E
Sbjct: 502 DCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETE 561
Query: 83 VFQSLKQDHVCNAIQPSHYLVNKLIHRF-KDDWKSALGIFRWAGSCPGYEHSSEIYEMMV 141
++L ++ + P + LIH K + +A G + Y ++
Sbjct: 562 KGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVI 621
Query: 142 DILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLE 200
D K ++++ LLEEM KGH T+ T V+ + + ++A F+E + G++
Sbjct: 622 DGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIK 681
Query: 201 KNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWT 259
N + L+D K G+++ A + EL + + PN +T+N + K ++EA
Sbjct: 682 LNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALIC 741
Query: 260 IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK 319
Q MK C P I+YS +I CR F+K + EMQ G PN +TYTT++S LAK
Sbjct: 742 FQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAK 801
Query: 320 SGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
+G+ EA + + K G PDS +N +I L A++ +A +++
Sbjct: 802 AGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFE 848
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 119/242 (49%), Gaps = 4/242 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTI--AKVMRRFSGAGQWED 186
G+ + Y ++D L K+ ++D+ L EE +K + + LN + + ++ F G+ ++
Sbjct: 644 GHPPTVVTYGSVIDGLAKIDRLDEAYMLFEE-AKSNGIKLNVVVYSSLIDGFGKVGRIDE 702
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIH 245
A +EL GL N T N LLD L K ++ A F +K PPN T++I I+
Sbjct: 703 AYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILIN 762
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G C++ + ++A QEM+ G P I+Y+T+I + N + L +A G P
Sbjct: 763 GLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIP 822
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
+ +Y ++ L+ + +A + E+ ++ G ++ L+ L +A +++A V
Sbjct: 823 DSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAECLEQAAIVG 882
Query: 366 QV 367
V
Sbjct: 883 AV 884
>gi|449464322|ref|XP_004149878.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37230-like [Cucumis sativus]
Length = 760
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 203/412 (49%), Gaps = 14/412 (3%)
Query: 97 QPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRAL 156
Q H LV ++H K + AL FRW ++H E + +++ILG+ +++ R +
Sbjct: 118 QFDHNLVYNVLHAAKKS-EHALNFFRWVERAGLFQHDRETHFKIIEILGRASKLNHARCI 176
Query: 157 LEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK 215
L +M +KG + ++ + AG ++AV+ F ++ G+E++ ++ + L + +
Sbjct: 177 LLDMPNKGVQWDEDLFVVLIESYGKAGIVQEAVKIFQKMKELGVERSVKSYDALFKEIMR 236
Query: 216 EGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVIS 274
G+ +A+ F L I P HT+N+ + G+ R++ A+ ++MK G P V++
Sbjct: 237 RGRYMMAKRYFNAMLNEGIEPIRHTYNVMLWGFFLSLRLETAKRFYEDMKSRGISPDVVT 296
Query: 275 YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
Y+T+I YCR + + EM+ + P V++YTT++ ++A+R+ E+MK
Sbjct: 297 YNTMINGYCRFKMMEEAEQFFTEMKGKNIAPTVISYTTMIKGYVSVSRADDALRLFEEMK 356
Query: 335 IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP-DTSTFNTMITMFSHHGH 393
G KP+ ++ L+ L A ++ EA + EM AP D S F +++ HG
Sbjct: 357 AAGEKPNDITYSTLLPGLCDAEKLPEARKIL-TEMVTRHFAPKDNSIFMRLLSCQCKHGD 415
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKH-------H 446
+ A HVL+ M +L + L+++C K G D+ + +LL+++V K
Sbjct: 416 LDAAMHVLKAMIRLS-IPTEAGHYGILIENCCKAGMYDQAV-KLLENLVEKEIILRPQST 473
Query: 447 LSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQ 498
L ++ + Y L+I LC + A F++++ I LI K+
Sbjct: 474 LEMEASAYNLIIQYLCNHGQTGKADTFFRQLLKKGIQDEVAFNNLIRGHAKE 525
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 137/312 (43%), Gaps = 7/312 (2%)
Query: 207 NLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
NL+ + L K E A + F +E + T I + ++++ A+ + +M
Sbjct: 122 NLVYNVLHAAKKSEHALNFFRWVERAGLFQHDRETHFKIIEILGRASKLNHARCILLDMP 181
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
G + +I+SY + + ++ +M+ G +V +Y + + + G +
Sbjct: 182 NKGVQWDEDLFVVLIESYGKAGIVQEAVKIFQKMKELGVERSVKSYDALFKEIMRRGRYM 241
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTM 384
A R M G +P +N +++ + R++ A Y+ +M G++PD T+NTM
Sbjct: 242 MAKRYFNAMLNEGIEPIRHTYNVMLWGFFLSLRLETAKRFYE-DMKSRGISPDVVTYNTM 300
Query: 385 ITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK 444
I + E+A EM K ++ P V ++ ++K + D+ L +L ++M
Sbjct: 301 INGYCRFKMMEEAEQFFTEM-KGKNIAPTVISYTTMIKGYVSVSRADDAL-RLFEEMKAA 358
Query: 445 HHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHM-YD 503
DIT Y+ ++ GLC A K A + EM+ P+ + + L + KH D
Sbjct: 359 GEKPNDIT-YSTLLPGLCDAEKLPEARKILTEMVTRHFAPKDNSIFMRLLSCQCKHGDLD 417
Query: 504 AAEKIEAVMKKL 515
AA + M +L
Sbjct: 418 AAMHVLKAMIRL 429
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 95/460 (20%), Positives = 176/460 (38%), Gaps = 93/460 (20%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y M++ + + M++ EM +I T+ + +++ + + +DA+R F+E+
Sbjct: 297 YNTMINGYCRFKMMEEAEQFFTEMKGKNIAPTVISYTTMIKGYVSVSRADDALRLFEEMK 356
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELAR----------------SVFLELKSC------- 232
G + N T + LL LC K+ AR S+F+ L SC
Sbjct: 357 AAGEKPNDITYSTLLPGLCDAEKLPEARKILTEMVTRHFAPKDNSIFMRLLSCQCKHGDL 416
Query: 233 --------------IPPNAHTFNIFIHGWCKINRVDEA---------------------- 256
IP A + I I CK D+A
Sbjct: 417 DAAMHVLKAMIRLSIPTEAGHYGILIENCCKAGMYDQAVKLLENLVEKEIILRPQSTLEM 476
Query: 257 -----QWTIQEMKGHGCHPCV---------------ISYSTIIQSYCRQYNFSKVYELLD 296
IQ + HG ++++ +I+ + ++ N +E+L
Sbjct: 477 EASAYNLIIQYLCNHGQTGKADTFFRQLLKKGIQDEVAFNNLIRGHAKEGNPDLAFEMLK 536
Query: 297 EMQAQGCPPNVVTYTTVM-SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
M +G + +Y ++ SYL+K G+ +A + M G PDS F ++ +L
Sbjct: 537 IMGRRGVSRDAESYKLLIKSYLSK-GEPADAKTALDSMIENGHSPDSALFRSVMESLFAD 595
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCK--PN 413
RVQ A V M + G+ + ++ GH E+A L +N L +C P+
Sbjct: 596 GRVQTASRVMN-SMLDKGITENLDLVAKILEALFMRGHDEEA---LGRINLLMNCNCPPD 651
Query: 414 VQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLL 473
F+ LL + GKT L D + +++ ++Y V+ L A K AY +
Sbjct: 652 ---FNSLLSVLCEKGKTTSAFKLL--DFGLERECNIEFSSYEKVLDALLGAGKTLNAYAI 706
Query: 474 FKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
+++ + +C ++ + Q+ A+ + ++K
Sbjct: 707 LCKIMEKGGAKDWSSCDDLIKSLNQEGNTKQADILSRMIK 746
>gi|15223927|ref|NP_177262.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169669|sp|Q9C9A2.1|PP112_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g71060, mitochondrial; Flags: Precursor
gi|12323433|gb|AAG51696.1|AC016972_15 hypothetical protein; 31939-30407 [Arabidopsis thaliana]
gi|332197036|gb|AEE35157.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 510
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 105/427 (24%), Positives = 217/427 (50%), Gaps = 18/427 (4%)
Query: 95 AIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMR 154
+++ S L+ +++ + + AL +F+WA + G++H++ Y +++ LGK++Q +
Sbjct: 89 SVKLSPALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIW 148
Query: 155 ALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLC 214
+L+++M +++ T A + RR++ A + ++A+ F ++ FG + + N +LDTL
Sbjct: 149 SLVDDMKAKKLLSKETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLS 208
Query: 215 KEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCK---INRVDEAQWTIQEMKGHGCHP 270
K V A+ VF ++K P+ ++ I + GW + + RVDE +EMK G P
Sbjct: 209 KSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVN---REMKDEGFEP 265
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRIT 330
V++Y II ++C+ + + +EM+ + C P+ + ++++ L +A+
Sbjct: 266 DVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFF 325
Query: 331 EKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSH 390
E+ K G ++ +N L+ + R+++A Y EM GV P+ T++ ++
Sbjct: 326 ERSKSSGFPLEAPTYNALVGAYCWSQRMEDA-YKTVDEMRLKGVGPNARTYDIILHHLIR 384
Query: 391 HGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLD 450
++A+ V + M+ C+P V T+ +++ + D + ++ D+M K L
Sbjct: 385 MQRSKEAYEVYQTMS----CEPTVSTYEIMVRMFCNKERLDMAI-KIWDEMKGKGVLP-G 438
Query: 451 ITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT-PRYQTCRL---ILDEVKQKHMYDAAE 506
+ ++ +I LC NK + A F EM+ I P + RL +LDE ++ + D
Sbjct: 439 MHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVV 498
Query: 507 KIEAVMK 513
K++ + K
Sbjct: 499 KMDRLRK 505
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 180/365 (49%), Gaps = 13/365 (3%)
Query: 142 DILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEK 201
D+ G VR +++ + E ++ T K++R G+ DA R G
Sbjct: 55 DLAGAVRLVERSGSCDGEAPDVYLCT-----KLIRNLCRRGRTSDAARVLRAAEGSGSPV 109
Query: 202 NTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQ 261
+ N L+ C+ G ++ AR + + + P+A+T+ I C RV +A +
Sbjct: 110 DVFAYNTLVAGYCRYGHLDAARRLIGSMP--VAPDAYTYTPLIRVLCDRGRVADALSLLD 167
Query: 262 EMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSG 321
+M GC P V++Y+ ++++ CR F + +LDEM+A+GC PN+VTY +++ + + G
Sbjct: 168 DMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREG 227
Query: 322 DFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTF 381
++A + ++ G +PD+ + L+ L + R + ++ EM E P+ TF
Sbjct: 228 RVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELF-AEMMEKNCMPNEVTF 286
Query: 382 NTMITMFSHHGHHEKAFHVLEEMNKLEH-CKPNVQTFHPLLKSCFKTGKTDECLSQLLDD 440
+ +I F G E+A VLE+M EH C N + ++ S K G+ D+ +LL+D
Sbjct: 287 DMLIRFFCRGGMVERAIQVLEQMT--EHGCATNTTLCNIVINSICKQGRVDDAF-KLLND 343
Query: 441 MVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKH 500
M + + D +YT V+ GLCRA + + A L EM+ ++ P T + + QK
Sbjct: 344 M-GSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKG 402
Query: 501 MYDAA 505
+ + A
Sbjct: 403 LIEQA 407
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 125/477 (26%), Positives = 208/477 (43%), Gaps = 54/477 (11%)
Query: 41 IESYCSDGARLDHHQVLCVDSPRLPDIDVIISKVHVGSSEDEVFQ--SLKQDHVCNAIQP 98
+ YC G LD + L P PD + V V SL D + QP
Sbjct: 118 VAGYCRYG-HLDAARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQP 176
Query: 99 SHYLVNKLIHRF--KDDWKSALGIF---RWAGSCPGYEHSSEIYEMMVDILGKVRQMDQM 153
+ L+ ++ A+ + R G P Y ++++ + + ++D
Sbjct: 177 NVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIV----TYNVIINGMCREGRVDDA 232
Query: 154 RALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDT 212
R LL + S G + +++ + +W+D F E+ N T ++L+
Sbjct: 233 RELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRF 292
Query: 213 LCKEGKVELARSVFLELK--SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHP 270
C+ G VE A V ++ C N NI I+ CK RVD+A + +M +GC+P
Sbjct: 293 FCRGGMVERAIQVLEQMTEHGC-ATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNP 351
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRIT 330
ISY+T+++ CR + ELL+EM CPPN VT+ T + L + G E+AI +
Sbjct: 352 DTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLI 411
Query: 331 EKMK----IVG----------------------------SKPDSRFFNCLIYTLGRASRV 358
E+M VG KP++ + L+ L A R+
Sbjct: 412 EQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKPNTITYTTLLTGLCNAERL 471
Query: 359 QEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH-CKPNVQTF 417
A + EM P+ TFN +++ F G E+A ++E+M +EH C PN+ T+
Sbjct: 472 DGAAELV-AEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQM--MEHGCTPNLITY 528
Query: 418 HPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLF 474
+ LL K +++ L +LL +V+K +S D+ T++ +I L + ++ E A LF
Sbjct: 529 NTLLDGITKDCSSEDAL-ELLHGLVSK-GVSPDVITFSSIIGILSKEDRIEEAVQLF 583
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 148/322 (45%), Gaps = 16/322 (4%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++ L + + D + LL EM + + VT NT ++ + G E A+ +
Sbjct: 356 YTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQ---KGLIEQAIMLIE 412
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIP--PNAHTFNIFIHGWCKI 250
++ G T N L++ C +G ++ A LEL +P PN T+ + G C
Sbjct: 413 QMSEHGCTVGVVTYNALVNGFCVQGHIDSA----LELFRSMPCKPNTITYTTLLTGLCNA 468
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
R+D A + EM C P V++++ ++ +C++ + EL+++M GC PN++TY
Sbjct: 469 ERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITY 528
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
T++ + K E+A+ + + G PD F+ +I L + R++EAV ++ V +
Sbjct: 529 NTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHV-VQ 587
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKT 430
+ G+ P +N ++ + A M C PN T+ L++ G
Sbjct: 588 DIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVS-NGCMPNESTYIILIEGLAHEGLL 646
Query: 431 DECLSQLLDDMVNKHHLSLDIT 452
E LL + ++ L+ ++T
Sbjct: 647 KEA-QDLLSVLCSRGVLNKNLT 667
>gi|449507993|ref|XP_004163187.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g37230-like [Cucumis sativus]
Length = 760
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 203/412 (49%), Gaps = 14/412 (3%)
Query: 97 QPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRAL 156
Q H LV ++H K + AL FRW ++H E + +++ILG+ +++ R +
Sbjct: 118 QFDHNLVYNVLHAAKKS-EHALNFFRWVERAGLFQHDRETHFKIIEILGRASKLNHARCI 176
Query: 157 LEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK 215
L +M +KG + ++ + AG ++AV+ F ++ G+E++ ++ + L + +
Sbjct: 177 LLDMPNKGVQWDEDLFVVLIESYGKAGIVQEAVKIFQKMKELGVERSVKSYDALFKEIMR 236
Query: 216 EGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVIS 274
G+ +A+ F L I P HT+N+ + G+ R++ A+ ++MK G P V++
Sbjct: 237 RGRYMMAKRYFNAMLNEGIEPIRHTYNVMLWGFFLSLRLETAKRFYEDMKSRGISPDVVT 296
Query: 275 YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
Y+T+I YCR + + EM+ + P V++YTT++ ++A+R+ E+MK
Sbjct: 297 YNTMINGYCRFKMMEEAEQFFTEMKGKNIAPTVISYTTMIKGYVSVSRADDALRLFEEMK 356
Query: 335 IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP-DTSTFNTMITMFSHHGH 393
G KP+ ++ L+ L A ++ EA + EM AP D S F +++ HG
Sbjct: 357 AAGEKPNDITYSTLLPGLCDAEKLPEARKIL-TEMVTRHFAPKDNSIFMRLLSCQCKHGD 415
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKH-------H 446
+ A HVL+ M +L + L+++C K G D+ + +LL+++V K
Sbjct: 416 LDAAMHVLKAMIRLS-IPTEAGHYGILIENCCKAGMYDQAV-KLLENLVEKEIILRPQST 473
Query: 447 LSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQ 498
L ++ + Y L+I LC + A F++++ I LI K+
Sbjct: 474 LEMEASAYNLIIQYLCNHGQTGKADTFFRQLLKKGIQDEVAFNNLIRGHAKE 525
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 137/312 (43%), Gaps = 7/312 (2%)
Query: 207 NLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
NL+ + L K E A + F +E + T I + ++++ A+ + +M
Sbjct: 122 NLVYNVLHAAKKSEHALNFFRWVERAGLFQHDRETHFKIIEILGRASKLNHARCILLDMP 181
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
G + +I+SY + + ++ +M+ G +V +Y + + + G +
Sbjct: 182 NKGVQWDEDLFVVLIESYGKAGIVQEAVKIFQKMKELGVERSVKSYDALFKEIMRRGRYM 241
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTM 384
A R M G +P +N +++ + R++ A Y+ +M G++PD T+NTM
Sbjct: 242 MAKRYFNAMLNEGIEPIRHTYNVMLWGFFLSLRLETAKRFYE-DMKSRGISPDVVTYNTM 300
Query: 385 ITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK 444
I + E+A EM K ++ P V ++ ++K + D+ L +L ++M
Sbjct: 301 INGYCRFKMMEEAEQFFTEM-KGKNIAPTVISYTTMIKGYVSVSRADDAL-RLFEEMKAA 358
Query: 445 HHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHM-YD 503
DIT Y+ ++ GLC A K A + EM+ P+ + + L + KH D
Sbjct: 359 GEKPNDIT-YSTLLPGLCDAEKLPEARKILTEMVTRHFAPKDNSIFMRLLSCQCKHGDLD 417
Query: 504 AAEKIEAVMKKL 515
AA + M +L
Sbjct: 418 AAMHVLKAMIRL 429
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 95/460 (20%), Positives = 176/460 (38%), Gaps = 93/460 (20%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y M++ + + M++ EM +I T+ + +++ + + +DA+R F+E+
Sbjct: 297 YNTMINGYCRFKMMEEAEQFFTEMKGKNIAPTVISYTTMIKGYVSVSRADDALRLFEEMK 356
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELAR----------------SVFLELKSC------- 232
G + N T + LL LC K+ AR S+F+ L SC
Sbjct: 357 AAGEKPNDITYSTLLPGLCDAEKLPEARKILTEMVTRHFAPKDNSIFMRLLSCQCKHGDL 416
Query: 233 --------------IPPNAHTFNIFIHGWCKINRVDEA---------------------- 256
IP A + I I CK D+A
Sbjct: 417 DAAMHVLKAMIRLSIPTEAGHYGILIENCCKAGMYDQAVKLLENLVEKEIILRPQSTLEM 476
Query: 257 -----QWTIQEMKGHGCHPCV---------------ISYSTIIQSYCRQYNFSKVYELLD 296
IQ + HG ++++ +I+ + ++ N +E+L
Sbjct: 477 EASAYNLIIQYLCNHGQTGKADTFFRQLLKKGIQDEVAFNNLIRGHAKEGNPDLAFEMLK 536
Query: 297 EMQAQGCPPNVVTYTTVM-SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
M +G + +Y ++ SYL+K G+ +A + M G PDS F ++ +L
Sbjct: 537 IMGRRGVSRDAESYKLLIKSYLSK-GEPADAKTALDSMIENGHSPDSALFRSVMESLFAD 595
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCK--PN 413
RVQ A V M + G+ + ++ GH E+A L +N L +C P+
Sbjct: 596 GRVQTASRVMN-SMLDKGITENLDLVAKILEALFMRGHDEEA---LGRINLLMNCNCPPD 651
Query: 414 VQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLL 473
F+ LL + GKT L D + +++ ++Y V+ L A K AY +
Sbjct: 652 ---FNSLLSVLCEKGKTTSAFKLL--DFGLERECNIEFSSYEKVLDALLGAGKTLNAYAI 706
Query: 474 FKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
+++ + +C ++ + Q+ A+ + ++K
Sbjct: 707 LCKIMEKGGAKDWSSCDDLIKSLNQEGNTKQADILSRMIK 746
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 185/353 (52%), Gaps = 9/353 (2%)
Query: 162 KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVEL 221
K + T N + K + R A Q A+ +E+G++GL + +T L+ +EG +
Sbjct: 208 KPDVTTFNILIKALCR---AHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNG 264
Query: 222 ARSVFLELKSCIPPNAH-TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQ 280
A + ++ + P+++ T N+ +HG+CK R++E I EM G P ++++++
Sbjct: 265 ALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVN 324
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
CR + E+LD M +G P++ TY +++ L K G+ EEA+ I +M + P
Sbjct: 325 GLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSP 384
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
++ +N LI TL + ++V+EA + +V + G+ PD TFN++I +H A +
Sbjct: 385 NTVTYNTLISTLCKENQVEEATELARV-LTSKGILPDVCTFNSLIQGLCLTNNHRLAMEL 443
Query: 401 LEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHG 460
EEM K + C P+ T++ L+ S G+ +E LS LL +M S ++ TY +I G
Sbjct: 444 FEEM-KTKGCHPDEFTYNMLIDSLCSRGRLEEALS-LLKEM-ESSGCSRNVVTYNTLIDG 500
Query: 461 LCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEAVM 512
C+ + E A +F EM I+ T ++D + K + + +AA+ ++ ++
Sbjct: 501 FCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQML 553
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 113/391 (28%), Positives = 190/391 (48%), Gaps = 7/391 (1%)
Query: 109 RFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVT 167
R + D S L + WA P + SS IYE ++ LGK MR +L+EM G +
Sbjct: 80 RRQSDEDSILDLLDWASKQPNFVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIR 139
Query: 168 LNTIAKVMRRFSGAGQWEDAVRTFDELGT-FGLEKNTETMNLLLDTLCKEGKVELARSVF 226
T ++ ++ +++AV D + FGL+ + T N LL+ L K++L V
Sbjct: 140 RGTFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVN 199
Query: 227 LELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQ 285
+ S I P+ TFNI I C+ +++ A ++EM +G P +++T++Q + +
Sbjct: 200 SRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEE 259
Query: 286 YNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFF 345
N + + ++M A GCP + VT ++ K G EE + ++M G +PD F
Sbjct: 260 GNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTF 319
Query: 346 NCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMN 405
N L+ L R V+ A+ + V M + G PD T+N++I G E+A +L +M
Sbjct: 320 NSLVNGLCRIGHVKHALEILDV-MLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQM- 377
Query: 406 KLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRAN 465
L PN T++ L+ + K + +E ++L + +K L D+ T+ +I GLC N
Sbjct: 378 ILRDFSPNTVTYNTLISTLCKENQVEEA-TELARVLTSKGILP-DVCTFNSLIQGLCLTN 435
Query: 466 KCEWAYLLFKEMIGHDITPRYQTCRLILDEV 496
A LF+EM P T +++D +
Sbjct: 436 NHRLAMELFEEMKTKGCHPDEFTYNMLIDSL 466
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 121/413 (29%), Positives = 196/413 (47%), Gaps = 13/413 (3%)
Query: 87 LKQDHVCNAIQPSHYLVNKLIHRF-KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILG 145
+++ V S+ VN L+H + K+ + F S G+ + +V+ L
Sbjct: 268 IREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLC 327
Query: 146 KV----RQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEK 201
++ ++ + +L+E I T N++ + + G+ E+AV +++
Sbjct: 328 RIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKL---GEVEEAVEILNQMILRDFSP 384
Query: 202 NTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTI 260
NT T N L+ TLCKE +VE A + L S I P+ TFN I G C N A
Sbjct: 385 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELF 444
Query: 261 QEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKS 320
+EMK GCHP +Y+ +I S C + + LL EM++ GC NVVTY T++ K+
Sbjct: 445 EEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKN 504
Query: 321 GDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTST 380
EEA I ++M++ G + +N LI L + RV+EA + +M G+ PD T
Sbjct: 505 KRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMD-QMLMEGLKPDKFT 563
Query: 381 FNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDD 440
+N+++T F G +KA +++ M C+P+ T+ L+ K G+ E S+LL
Sbjct: 564 YNSLLTYFCRAGDIKKAADIVQTMTS-NGCEPDSVTYGTLILGLSKAGRV-ELASRLLR- 620
Query: 441 MVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
V + L TY VI L R + A LF+EM+ P T +++
Sbjct: 621 TVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVF 673
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 110/236 (46%), Gaps = 36/236 (15%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTF 240
G+ E+A+ E+ + G +N T N L+D CK ++E A +F E++ I N T+
Sbjct: 470 GRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTY 529
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
N I G CK RV+EA + +M G P +Y++++ +CR + K +++ M +
Sbjct: 530 NTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTS 589
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
GC P+ VTY T++ L+K+G E A R+ +++ G + +N +I L R R E
Sbjct: 590 NGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSE 649
Query: 361 AVYVYQ-----------------------------------VEMPENGVAPDTSTF 381
AV +++ VEM + G PD S+F
Sbjct: 650 AVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSF 705
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 110/250 (44%), Gaps = 44/250 (17%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKG---HIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y M++D L ++++ +LL+EM S G ++VT NT+ + F + E+A FD
Sbjct: 459 YNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTL---IDGFCKNKRIEEAEEIFD 515
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKIN 251
E+ G+ +N T N L+D LCK +VE A + + L + P+ T+N + +C+
Sbjct: 516 EMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAG 575
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYST---------------------------------- 277
+ +A +Q M +GC P ++Y T
Sbjct: 576 DIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYN 635
Query: 278 -IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL-AKSGDFEEAIRITEKMKI 335
+I++ R+ S+ L EM +G PP+ VTY V L + G EA+ +M
Sbjct: 636 PVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTD 695
Query: 336 VGSKPDSRFF 345
G PD F
Sbjct: 696 KGFLPDFSSF 705
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 96/230 (41%), Gaps = 39/230 (16%)
Query: 284 RQYNFSKVYELLDEMQAQ-GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDS 342
RQ + + +LLD Q P+ V Y V+ L K G F R+ ++MK G +
Sbjct: 81 RQSDEDSILDLLDWASKQPNFVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRR 140
Query: 343 RFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLE 402
F LI + + EAV V + E G+ D T+N ++ +VL
Sbjct: 141 GTFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLL-------------NVLV 187
Query: 403 EMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC 462
+ NKL+ L ++++ + + D+TT+ ++I LC
Sbjct: 188 DGNKLK-------------------------LVEIVNSRMVSRGIKPDVTTFNILIKALC 222
Query: 463 RANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
RA++ A L+ +EM + ++P +T ++ ++ + A +I M
Sbjct: 223 RAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQM 272
>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 121/431 (28%), Positives = 212/431 (49%), Gaps = 21/431 (4%)
Query: 82 EVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWK--SALGIF---RWAGSCPGYEHSSEI 136
E+F+ L+Q N P Y N +I + K A G+ + GS P S
Sbjct: 76 ELFEQLEQ----NRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIP----SVIA 127
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGT 196
Y ++ LGK R++++ + EEM + + + T ++ G+ A+ D++
Sbjct: 128 YNCILTCLGKKRRVEEALRIFEEMKRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMER 187
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKINRVD 254
GL N T+N+++D LCK K+E A S+F ++ K C PNA TF+ I G K RVD
Sbjct: 188 AGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVC-TPNAVTFSSLIDGLGKCGRVD 246
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
+A ++M G P I Y+++I+S+ + +++ EM GC P++ T M
Sbjct: 247 DAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYM 306
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
+ K+G+ E+ + ++ G PD+R ++ LI+ L +A E ++ M E G
Sbjct: 307 DCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYA-MKEQGC 365
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
DT +N +I F G KA+ +LEEM K++ P V T+ ++ K + DE
Sbjct: 366 VLDTHAYNAVIDGFCKSGKVNKAYQLLEEM-KVKGHPPTVVTYGSVIDGLAKIDRLDE-- 422
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
+ +L + + + L++ Y+ +I G + + + AYL+ +E++ +TP T +LD
Sbjct: 423 AYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLD 482
Query: 495 E-VKQKHMYDA 504
VK + + +A
Sbjct: 483 ALVKAEEINEA 493
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 113/415 (27%), Positives = 185/415 (44%), Gaps = 41/415 (9%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
+ ++D LGK ++D +L E+M GH+ ++R F G+ ED + + E+
Sbjct: 232 FSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMV 291
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVD 254
G + +N +D + K G+ E R++F E+ + P+A +++I IHG K +
Sbjct: 292 HTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLAN 351
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
E MK GC +Y+ +I +C+ +K Y+LL+EM+ +G PP VVTY +V+
Sbjct: 352 ETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVI 411
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
LAK +EA + E+ K G K + ++ LI G+ R+ EA Y+ E+ + G+
Sbjct: 412 DGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEA-YLIMEELMQKGL 470
Query: 375 APDTSTFN-----------------------------------TMITMFSHHGHHEKAFH 399
P+ T+N +I KAF
Sbjct: 471 TPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFV 530
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIH 459
+EM KL KPN T+ ++ K G E S L + D +Y +I
Sbjct: 531 FWQEMQKL-GLKPNTITYTTMISGLAKAGNILEA-SGLFSRFKANGGIP-DSASYNAMIE 587
Query: 460 GLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
GL ANK AY LF+E +TC ++LD + + + A + AV+K+
Sbjct: 588 GLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAECLEQAAIVGAVLKE 642
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 166/347 (47%), Gaps = 11/347 (3%)
Query: 31 NCSH----IVSSSPIESYCSDGARLDHHQVL--CVDSPRLPDIDVIISKVH--VGSSEDE 82
+C H IV +S I S+ G + D H++ V + PD+ +I + + + E E
Sbjct: 257 DCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETE 316
Query: 83 VFQSLKQDHVCNAIQPSHYLVNKLIHRF-KDDWKSALGIFRWAGSCPGYEHSSEIYEMMV 141
++L ++ + P + LIH K + +A G + Y ++
Sbjct: 317 KGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVI 376
Query: 142 DILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLE 200
D K ++++ LLEEM KGH T+ T V+ + + ++A F+E + G++
Sbjct: 377 DGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIK 436
Query: 201 KNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWT 259
N + L+D K G+++ A + EL + + PN +T+N + K ++EA
Sbjct: 437 LNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALIC 496
Query: 260 IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK 319
Q MK C P I+YS +I CR F+K + EMQ G PN +TYTT++S LAK
Sbjct: 497 FQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAK 556
Query: 320 SGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
+G+ EA + + K G PDS +N +I L A++ +A +++
Sbjct: 557 AGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFE 603
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 161/364 (44%), Gaps = 5/364 (1%)
Query: 143 ILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVM-RRFSGAGQWEDAVRTFDELGTFGLEK 201
+L K ++D+ L E++ + V M + AG++++A + G
Sbjct: 64 VLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIP 123
Query: 202 NTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQ 261
+ N +L L K+ +VE A +F E+K PN T+NI I C+ +++ A
Sbjct: 124 SVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPNVPTYNILIDMLCREGKLNAALEIRD 183
Query: 262 EMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSG 321
+M+ G P V++ + +I C+ + + + M + C PN VT+++++ L K G
Sbjct: 184 DMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCG 243
Query: 322 DFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTF 381
++A + EKM G P + + LI + + R ++ +Y+ EM G +PD +
Sbjct: 244 RVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYK-EMVHTGCSPDLTLI 302
Query: 382 NTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDM 441
NT + G EK + E+N P+ +++ L+ K G +E L
Sbjct: 303 NTYMDCVFKAGETEKGRALFREINA-HGFIPDARSYSILIHGLVKAGLANETYE--LFYA 359
Query: 442 VNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHM 501
+ + LD Y VI G C++ K AY L +EM P T ++D + +
Sbjct: 360 MKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDR 419
Query: 502 YDAA 505
D A
Sbjct: 420 LDEA 423
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 119/242 (49%), Gaps = 4/242 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTI--AKVMRRFSGAGQWED 186
G+ + Y ++D L K+ ++D+ L EE +K + + LN + + ++ F G+ ++
Sbjct: 399 GHPPTVVTYGSVIDGLAKIDRLDEAYMLFEE-AKSNGIKLNVVVYSSLIDGFGKVGRIDE 457
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIH 245
A +EL GL N T N LLD L K ++ A F +K PPN T++I I+
Sbjct: 458 AYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILIN 517
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G C++ + ++A QEM+ G P I+Y+T+I + N + L +A G P
Sbjct: 518 GLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIP 577
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
+ +Y ++ L+ + +A + E+ ++ G ++ L+ L +A +++A V
Sbjct: 578 DSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAECLEQAAIVG 637
Query: 366 QV 367
V
Sbjct: 638 AV 639
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 188/394 (47%), Gaps = 10/394 (2%)
Query: 121 FRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSG 180
+ AG P + I M + MD +R++ G + T ++ F+
Sbjct: 16 MKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM------GCDPNVVTYTALIAAFAR 69
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHT 239
A + E+A++ +E+ G N T N+L+D LCK V A+ V ++ + PN T
Sbjct: 70 AKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMT 129
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
FN + G+CK VD+A+ + M G P V++YS +I C+ F + E+L+EM+
Sbjct: 130 FNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMK 189
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
A G P+ TY+ ++ L K+ EEA ++ +M G PD ++ +I+ ++ ++
Sbjct: 190 ASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLL 249
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
EA Q EM + +PD T+NT+I G +A +L++M + P+V T+
Sbjct: 250 EAQKTLQ-EMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYST 308
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
++ K+ E +Q L D + K + D+ TYT +I GLC+ + E A L + M
Sbjct: 309 VINGLCKSDMLVE--AQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKR 366
Query: 480 HDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
P T ++ + + D AE++ M+
Sbjct: 367 AGCAPNVVTYTTLISGLCKARKVDEAERVMEEMR 400
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 182/362 (50%), Gaps = 10/362 (2%)
Query: 156 LLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLC 214
LLEEM S G T ++ + AG + A D L + G + N T L+
Sbjct: 12 LLEEMKSAGFAPDAFTHTPIITAMANAGDLDGA---MDHLRSMGCDPNVVTYTALIAAFA 68
Query: 215 KEGKVELARSVFLELK--SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCV 272
+ K+E A + E++ C PPN T+N+ + CK++ V AQ +++M G P V
Sbjct: 69 RAKKLEEAMKLLEEMRERGC-PPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNV 127
Query: 273 ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEK 332
+++++++ +C++ N +LL M A+G PNVVTY+ ++ L KS F EA + E+
Sbjct: 128 MTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEE 187
Query: 333 MKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
MK G PD+ ++ LI+ L +A +++EA + + M +G PD ++++I F G
Sbjct: 188 MKASGVTPDAFTYSALIHGLCKADKIEEAEQMLR-RMAGSGCTPDVVVYSSIIHAFCKSG 246
Query: 393 HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
+A L+EM K + P+V T++ ++ K GK E +LD M + D+
Sbjct: 247 KLLEAQKTLQEMRK-QRKSPDVVTYNTVIDGLCKLGKIAEA-QVILDQMQESGDVLPDVV 304
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
TY+ VI+GLC+++ A L M P T I+D + + + AE + M
Sbjct: 305 TYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGM 364
Query: 513 KK 514
K+
Sbjct: 365 KR 366
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 183/382 (47%), Gaps = 17/382 (4%)
Query: 113 DWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKG---HIVTL 168
D A+ R G P + Y ++ + +++++ LLEEM +G ++VT
Sbjct: 40 DLDGAMDHLRSMGCDP----NVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTY 95
Query: 169 NTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF-L 227
N + + + S G +D V+ E G N T N L+D CK G V+ AR + +
Sbjct: 96 NVLVDALCKLSMVGAAQDVVKKMIE---GGFAPNVMTFNSLVDGFCKRGNVDDARKLLGI 152
Query: 228 ELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYN 287
+ + PN T++ I G CK + EA+ ++EMK G P +YS +I C+
Sbjct: 153 MVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADK 212
Query: 288 FSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNC 347
+ ++L M GC P+VV Y++++ KSG EA + ++M+ PD +N
Sbjct: 213 IEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNT 272
Query: 348 LIYTLGRASRVQEAVYVYQVEMPENG-VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNK 406
+I L + ++ EA + +M E+G V PD T++T+I +A +L+ M K
Sbjct: 273 VIDGLCKLGKIAEAQVILD-QMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCK 331
Query: 407 LEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANK 466
C P+V T+ ++ K G+ +E ++ L + + + ++ TYT +I GLC+A K
Sbjct: 332 -AGCNPDVVTYTTIIDGLCKCGRLEE--AEYLLQGMKRAGCAPNVVTYTTLISGLCKARK 388
Query: 467 CEWAYLLFKEMIGHDITPRYQT 488
+ A + +EM P T
Sbjct: 389 VDEAERVMEEMRNAGCPPNLVT 410
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 177/384 (46%), Gaps = 57/384 (14%)
Query: 67 IDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRF-----KDDWKSALGIF 121
+D + VG+++D V + ++ P+ N L+ F DD + LGI
Sbjct: 99 VDALCKLSMVGAAQDVVKKMIE-----GGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIM 153
Query: 122 RWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIV--------------- 166
G P + Y ++D L K ++ + + +LEEM +
Sbjct: 154 VAKGMRP----NVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCK 209
Query: 167 --TLNTIAKVMRRFSGAGQWEDAV-------------------RTFDELGTFGLEKNTET 205
+ +++RR +G+G D V +T E+ + T
Sbjct: 210 ADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVT 269
Query: 206 MNLLLDTLCKEGKVELARSVFLELKSC--IPPNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
N ++D LCK GK+ A+ + +++ + P+ T++ I+G CK + + EAQ + M
Sbjct: 270 YNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRM 329
Query: 264 KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF 323
GC+P V++Y+TII C+ + LL M+ GC PNVVTYTT++S L K+
Sbjct: 330 CKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKV 389
Query: 324 EEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA---PDTST 380
+EA R+ E+M+ G P+ +N ++ L + R++EA + V+ ++G A PD +T
Sbjct: 390 DEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQL--VQRMKDGRAECSPDAAT 447
Query: 381 FNTMITMFSHHGHHEKAFHVLEEM 404
+ T++ ++A +LE+M
Sbjct: 448 YRTIVNALMSSDLVQEAEQLLEQM 471
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 113/234 (48%), Gaps = 36/234 (15%)
Query: 283 CRQYNFSKVYELLDEMQAQ--------------------------------GCPPNVVTY 310
C + ELL+EM++ GC PNVVTY
Sbjct: 1 CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNVVTY 60
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
T +++ A++ EEA+++ E+M+ G P+ +N L+ L + S V A V + +M
Sbjct: 61 TALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVK-KMI 119
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKT 430
E G AP+ TFN+++ F G+ + A +L M + +PNV T+ L+ K+ K
Sbjct: 120 EGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVA-KGMRPNVVTYSALIDGLCKSQKF 178
Query: 431 DECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
E ++L++M ++ D TY+ +IHGLC+A+K E A + + M G TP
Sbjct: 179 LEA-KEVLEEM-KASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTP 230
>gi|326525088|dbj|BAK07814.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 539
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 169/346 (48%), Gaps = 6/346 (1%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
+Y M+D+L K R LL+EM + I V+ I ++RR+ AG +A F +
Sbjct: 141 LYAAMIDLLAKHHHFPLARHLLDEMRERSIPVSSQVILAIIRRYVRAGMSPEASELFRRM 200
Query: 195 GTFGLE-KNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRV 253
+G + + LL L K+ A+++F KS PP+ + +H WC+ +
Sbjct: 201 EEYGAGVPDPAVLASLLGALSKKRLAGEAQALFDSYKSVFPPDVVLYTTLVHAWCRAGCL 260
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
D+A+ EM+ G P V +Y+++I + R + ELL +M GCPPN T+ +
Sbjct: 261 DKAEQVFAEMQQAGIMPNVYTYTSVIDAMYRAGQVPRAQELLCQMMETGCPPNTATFNAI 320
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYT-LGRASRVQEAVYVYQVEMPEN 372
M K+G E+ +++ +M+ +G PD +N L+ T G+ +A +M
Sbjct: 321 MRAHVKAGRSEQVLQVHNQMRQLGCDPDIITYNFLMETHCGKGQSNLDAAMKVLAKMIAK 380
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
G PD TFN M+ + G+ E A + E M +L+ CKPNV T++ L+K F K+ +
Sbjct: 381 GCIPDCHTFNPMLKLVLGTGNVEAARRLYERMQELQ-CKPNVVTYNLLMK-LFNKEKSMD 438
Query: 433 CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
+ ++ DM + + ++ TY +I C A+ +EM+
Sbjct: 439 MVLRIKKDM-DAQGVEPNVNTYGALIESFCGRGNWRRAHATLREMV 483
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 132/265 (49%), Gaps = 6/265 (2%)
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHT 239
AG + A + F E+ G+ N T ++D + + G+V A+ + ++ ++ PPN T
Sbjct: 257 AGCLDKAEQVFAEMQQAGIMPNVYTYTSVIDAMYRAGQVPRAQELLCQMMETGCPPNTAT 316
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCR--QYNFSKVYELLDE 297
FN + K R ++ +M+ GC P +I+Y+ +++++C Q N ++L +
Sbjct: 317 FNAIMRAHVKAGRSEQVLQVHNQMRQLGCDPDIITYNFLMETHCGKGQSNLDAAMKVLAK 376
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
M A+GC P+ T+ ++ + +G+ E A R+ E+M+ + KP+ +N L+ + +
Sbjct: 377 MIAKGCIPDCHTFNPMLKLVLGTGNVEAARRLYERMQELQCKPNVVTYNLLMKLFNK-EK 435
Query: 358 VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTF 417
+ V + +M GV P+ +T+ +I F G+ +A L EM + + KP +
Sbjct: 436 SMDMVLRIKKDMDAQGVEPNVNTYGALIESFCGRGNWRRAHATLREMVEEKSLKPTKPVY 495
Query: 418 HPLLKSCFKTG--KTDECLSQLLDD 440
+L K G + E L +L+ D
Sbjct: 496 DMVLMLLRKAGQLRKHEELVELMAD 520
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 124/446 (27%), Positives = 199/446 (44%), Gaps = 49/446 (10%)
Query: 88 KQDHVCNAIQPSHYLVNKLIHRFKDDW--KSALGIFRWAGSCPGYEHSSEIYEMMVDILG 145
K V NA Y N LIH AL ++R S G + S + Y ++ LG
Sbjct: 185 KAGFVLNA-----YSYNGLIHLLIQSGFCGEALEVYRRMVS-EGLKPSLKTYSALMVALG 238
Query: 146 KVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTE 204
K R + + LL+EM G + T +R AG+ ++A F + G +
Sbjct: 239 KKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLV 298
Query: 205 TMNLLLDTLCKEGKVELARSVFLELKS--------------------------------- 231
T +L+D LC G++E A+ +F+++K+
Sbjct: 299 TYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQM 358
Query: 232 ---CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
P+ TF I + CK DEA T M+ G P + +Y+T+I R
Sbjct: 359 EADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRI 418
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
+LL M++ G P TY + Y KSG+ +A+ EKMK G P+ N
Sbjct: 419 EDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNAS 478
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
+Y+L R++EA ++ + ENG+APD+ T+N M+ +S G ++A ++L EM +
Sbjct: 479 LYSLAEMGRLREAKTMFN-GLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIR-N 536
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
C+P+V + L+ S +K G+ DE Q+ D M LS + TY ++ GL + + +
Sbjct: 537 GCEPDVIVVNSLIDSLYKAGRVDEAW-QMFDRM-KDMKLSPTVVTYNTLLSGLGKEGRVQ 594
Query: 469 WAYLLFKEMIGHDITPRYQTCRLILD 494
A LF+ MI +P + +LD
Sbjct: 595 KAIELFESMIEKKCSPNTISFNTLLD 620
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 187/382 (48%), Gaps = 22/382 (5%)
Query: 61 SPRLPDIDVIISKV-HVGSSED--EVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSA 117
P L V+I + + G E+ E+F +K N +P + L+ +F D
Sbjct: 294 GPDLVTYTVLIDALCNAGQLENAKELFVKMK----ANGHKPDQVIYITLLDKFND--FGD 347
Query: 118 LGIFR--WAG-SCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIV----TLNT 170
L F+ W+ GY + ++VD+L K R D+ A + M K I+ T NT
Sbjct: 348 LDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNT 407
Query: 171 IAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK 230
+ + R AG+ EDA++ + + G++ T N+ +D K G+ A F ++K
Sbjct: 408 LICGLLR---AGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMK 464
Query: 231 S-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFS 289
+ I PN N ++ ++ R+ EA+ ++ +G P ++Y+ +++ Y +
Sbjct: 465 AKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVD 524
Query: 290 KVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
+ LL EM GC P+V+ +++ L K+G +EA ++ ++MK + P +N L+
Sbjct: 525 EAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLL 584
Query: 350 YTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH 409
LG+ RVQ+A+ +++ M E +P+T +FNT++ F + E A + +M ++
Sbjct: 585 SGLGKEGRVQKAIELFE-SMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMD- 642
Query: 410 CKPNVQTFHPLLKSCFKTGKTD 431
CKP+V T++ ++ K K +
Sbjct: 643 CKPDVLTYNTVIYGLIKENKVN 664
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 141/290 (48%), Gaps = 12/290 (4%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM----SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
+ M++ + GK ++ ++ L +EM K +T N V+ + + + A+ F
Sbjct: 826 FNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNI---VISSLAKSNNLDKALDFFY 882
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK--SCIPPNAHTFNIFIHGWCKI 250
+L + T L+D L K G++E A +F E+ C PN FNI I+G+ KI
Sbjct: 883 DLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGC-KPNCAIFNILINGYGKI 941
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
+ A + M G P + SY+ ++ C + +E+++ G P+ + Y
Sbjct: 942 GDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAY 1001
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
+++ L KS EEA+ + +M+ G PD +N L+ LG A V++A +Y+ E+
Sbjct: 1002 NRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYE-ELQ 1060
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
G+ PD T+N +I +S + E A+ V + M ++ C PN+ T+ L
Sbjct: 1061 LAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNM-MVDGCNPNIGTYAQL 1109
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 158/329 (48%), Gaps = 6/329 (1%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHT 239
+ + A+ +EL G+ + + L+ LCK + A +F + K I P +
Sbjct: 731 AEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLAS 790
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+N I +++ ++A ++MK GC P +++ ++ + + ++++EL EM
Sbjct: 791 YNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMI 850
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
++ C P+ +TY V+S LAKS + ++A+ + +P R + LI L + R++
Sbjct: 851 SRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLE 910
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
EA+ +++ EM + G P+ + FN +I + G E A + + M E +P+++++
Sbjct: 911 EAMRLFE-EMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVN-EGIRPDLKSYTI 968
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
L+ G+ DE L + + L D Y +I+GL ++ + E A L+ EM
Sbjct: 969 LVDCLCLAGRVDEALYYF--NELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRN 1026
Query: 480 HDITPRYQTCRLILDEVKQKHMYDAAEKI 508
I P T ++ + M + A+++
Sbjct: 1027 RGIVPDLYTYNSLMLNLGLAGMVEQAKRM 1055
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/412 (23%), Positives = 180/412 (43%), Gaps = 44/412 (10%)
Query: 141 VDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGL 199
+ I G +RQM +L +M K G ++ + ++ +G +A+ + + + GL
Sbjct: 167 LSIRGGLRQM---TTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGL 223
Query: 200 EKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQW 258
+ + +T + L+ L K+ E+ + E++ + PN +TF I I + ++DEA
Sbjct: 224 KPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYE 283
Query: 259 TIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL----------------------- 295
+ M GC P +++Y+ +I + C EL
Sbjct: 284 IFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFN 343
Query: 296 ------------DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSR 343
+M+A G P+VVT+T ++ L K+ DF+EA + M+ G P+
Sbjct: 344 DFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLH 403
Query: 344 FFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEE 403
+N LI L RA R+++A+ + M GV P T+N I F G KA E+
Sbjct: 404 TYNTLICGLLRAGRIEDALKLLGT-MESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEK 462
Query: 404 MNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCR 463
M K + PN+ + L S + G+ E ++ + + + ++ L+ D TY +++ +
Sbjct: 463 M-KAKGIVPNIVACNASLYSLAEMGRLRE--AKTMFNGLRENGLAPDSVTYNMMMKCYSK 519
Query: 464 ANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
+ + A L EMI + P ++D + + D A ++ MK +
Sbjct: 520 VGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDM 571
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 95/441 (21%), Positives = 176/441 (39%), Gaps = 49/441 (11%)
Query: 95 AIQPSHYLVNKLI------HRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVR 148
I P+ + N LI R +D K LG G P ++ Y + +D GK
Sbjct: 397 GILPNLHTYNTLICGLLRAGRIEDALK-LLGTMESVGVQP----TAYTYNIFIDYFGKSG 451
Query: 149 QMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN 207
+ + E+M +KG + + + + G+ +A F+ L GL ++ T N
Sbjct: 452 ETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYN 511
Query: 208 LLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
+++ K G+V+ A ++ E+ ++ P+ N I K RVDEA MK
Sbjct: 512 MMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDM 571
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
P V++Y+T++ ++ K EL + M + C PN +++ T++ K+ + E A
Sbjct: 572 KLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELA 631
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
+++ KM ++ KPD +N +IY L + ++V A + + + + PD T T++
Sbjct: 632 LKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFH--QLKKSMHPDHVTICTLLP 689
Query: 387 MFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL------------ 434
G A + + + N + L+ + D+ +
Sbjct: 690 GLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGIC 749
Query: 435 ----------------------SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
Q+ D K +S + +Y +I L + E A+
Sbjct: 750 REDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWD 809
Query: 473 LFKEMIGHDITPRYQTCRLIL 493
LFK+M P T ++L
Sbjct: 810 LFKDMKNVGCAPDAFTFNMLL 830
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 139/300 (46%), Gaps = 6/300 (2%)
Query: 187 AVRTFDELGT-FGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFI 244
A + FD+ G+ + N L+ L + E A +F ++K+ P+A TFN+ +
Sbjct: 771 AYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLL 830
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
K ++ E +EM C P I+Y+ +I S + N K + ++ +
Sbjct: 831 AVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFR 890
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
P TY ++ LAK G EEA+R+ E+M G KP+ FN LI G+ + A +
Sbjct: 891 PTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQL 950
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
++ M G+ PD ++ ++ G ++A + E+ K P+ ++ ++
Sbjct: 951 FK-RMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNEL-KSTGLDPDFIAYNRIINGL 1008
Query: 425 FKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
K+ + +E L+ L ++M N+ + D+ TY ++ L A E A +++E+ + P
Sbjct: 1009 GKSQRMEEALA-LYNEMRNRGIVP-DLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEP 1066
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 124/287 (43%), Gaps = 5/287 (1%)
Query: 203 TETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQ 261
TET N +L+ L KVE +VF K I + T+ + + +
Sbjct: 122 TETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLN 181
Query: 262 EMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSG 321
+M+ G SY+ +I + + E+ M ++G P++ TY+ +M L K
Sbjct: 182 KMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKR 241
Query: 322 DFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTF 381
D E + + ++M+ +G +P+ F I LGRA ++ EA +++ M + G PD T+
Sbjct: 242 DSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFR-RMDDEGCGPDLVTY 300
Query: 382 NTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDM 441
+I + G E A + +M H KP+ + LL G D + M
Sbjct: 301 TVLIDALCNAGQLENAKELFVKMKANGH-KPDQVIYITLLDKFNDFGDLD-TFKEFWSQM 358
Query: 442 VNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
++ D+ T+T+++ LC+A + A+ F M I P T
Sbjct: 359 EADGYMP-DVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHT 404
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 176/347 (50%), Gaps = 15/347 (4%)
Query: 146 KVRQMDQMRALLEEM----SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEK 201
++R+++ R LLE+M K IV+ N + + R G +A++ F + G E
Sbjct: 235 ELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGV---SEALKLFGSVLRQGYEP 291
Query: 202 NTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTI 260
T N+L+D L KE +V A +F L K + P+A T+ +FI G CK RV++A +
Sbjct: 292 EVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLML 351
Query: 261 QEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKS 320
++M GC P V+S++ +I C++ + LL M+A+GC PN +++ T++ ++
Sbjct: 352 KDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRA 411
Query: 321 GDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA---SRVQEAVYVYQVEMPENGVAPD 377
G +++A+ ++M G KP +N L+ L +A R++EA+ ++ M E G PD
Sbjct: 412 GKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDA-MIEKGRVPD 470
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
T++ +I G + A +L M + C PNV T++ L+ K DE L +L
Sbjct: 471 VVTYSALIDGLGKAGKLDDARRLLGAMEA-KGCIPNVYTYNSLISGLCGLDKVDEAL-EL 528
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
MV K + D TY +I LC+ + A LF + + P
Sbjct: 529 FVAMVEKGCVP-DTITYGTIISALCKQEMVDKALALFDGSLEAGVVP 574
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 185/372 (49%), Gaps = 16/372 (4%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKG----HIVTLNTIAKVMRRFSGAGQW 184
G+ + Y ++ L +M +AL E M K +VT NT+ + F G+
Sbjct: 80 GFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTL---LHGFCKVGKL 136
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIF 243
++A++ FD G + T N L++ CK K++ A+ + + S + P+ T+N
Sbjct: 137 DEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSL 196
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYN-FSKVYELLDEMQAQG 302
++G CK RVDEA+ I + G P VI+YST+I CR+ +LL++M G
Sbjct: 197 VNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNG 253
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
C P++V+Y ++ LA+ EA+++ + G +P+ +N LI L + RV EA
Sbjct: 254 CKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAF 313
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLK 422
++ + ++G+ PD T+ I G E A +L++M++ + C P+V + + ++
Sbjct: 314 ELFS-GLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDE-KGCVPDVVSHNAVIN 371
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
K + DE +++L + S + ++ +I G CRA K + A FKEM+ +
Sbjct: 372 GLCKEKRVDE--AEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGV 429
Query: 483 TPRYQTCRLILD 494
P T +++D
Sbjct: 430 KPTVVTYNILVD 441
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 165/336 (49%), Gaps = 11/336 (3%)
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHT 239
A + DA FD + G N T N LL LC G++ A++++ + K+ P+ T
Sbjct: 63 ASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVT 122
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+N +HG+CK+ ++DEA G P V++Y+ +I +C+ + +L M
Sbjct: 123 YNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMV 182
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIV--GSKPDSRFFNCLIYTLGRASR 357
++ P+VVTY ++++ L K+G +EA +M IV G P+ ++ LI L R R
Sbjct: 183 SESLVPDVVTYNSLVNGLCKNGRVDEA-----RMLIVDKGFSPNVITYSTLISGLCRELR 237
Query: 358 VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTF 417
E+ +M NG PD ++N +I + +A + + + + +P V T+
Sbjct: 238 RLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLR-QGYEPEVPTY 296
Query: 418 HPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
+ L+ K + +E +L +V KH L D TYT+ I GLC+A + E A L+ K+M
Sbjct: 297 NILIDGLLKEDRVNEAF-ELFSGLV-KHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDM 354
Query: 478 IGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
P + +++ + ++ D AE + + M+
Sbjct: 355 DEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGME 390
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 148/310 (47%), Gaps = 7/310 (2%)
Query: 205 TMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
T+ +LL +L K GK+E A +L + TFNI+I G C+ +R+ +AQ M+
Sbjct: 18 TVGILLRSLLKSGKIEKAHRFVEQLLVKGLCDISTFNIYISGLCRASRIGDAQTVFDGMR 77
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
HG P I+Y+ ++ C S L + M G P+VVTY T++ K G +
Sbjct: 78 KHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLD 137
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTM 384
EA++I + G PD +N LI +A ++ EA + Q M + PD T+N++
Sbjct: 138 EALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQ-RMVSESLVPDVVTYNSL 196
Query: 385 ITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK 444
+ +G ++A ++ + + PNV T+ L+ + + E QLL+ MV
Sbjct: 197 VNGLCKNGRVDEARMLIVD----KGFSPNVITYSTLISGLCRELRRLESARQLLEKMV-L 251
Query: 445 HHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE-VKQKHMYD 503
+ DI +Y +IHGL R A LF ++ P T +++D +K+ + +
Sbjct: 252 NGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNE 311
Query: 504 AAEKIEAVMK 513
A E ++K
Sbjct: 312 AFELFSGLVK 321
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 181/378 (47%), Gaps = 19/378 (5%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKG---HIVTLNT-IAKVMRRFSGAGQWEDAVRTFD 192
Y +V+ L K ++D+ R L+ + KG +++T +T I+ + R + E A + +
Sbjct: 193 YNSLVNGLCKNGRVDEARMLI--VDKGFSPNVITYSTLISGLCRELR---RLESARQLLE 247
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKIN 251
++ G + + + N L+ L +E V A +F L+ P T+NI I G K +
Sbjct: 248 KMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKED 307
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
RV+EA + HG P I+Y+ I C+ +L +M +GC P+VV++
Sbjct: 308 RVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHN 367
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
V++ L K +EA + M+ G P++ FN LI RA + ++A+ ++ EM +
Sbjct: 368 AVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFK-EMLK 426
Query: 372 NGVAPDTSTFNTMITMF---SHHGHHEKAFHVLEEMNKLEHCK-PNVQTFHPLLKSCFKT 427
GV P T+N ++ G ++A + + M +E + P+V T+ L+ K
Sbjct: 427 RGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAM--IEKGRVPDVVTYSALIDGLGKA 484
Query: 428 GKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
GK D+ +LL M K + ++ TY +I GLC +K + A LF M+ P
Sbjct: 485 GKLDDA-RRLLGAMEAKGCIP-NVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTI 542
Query: 488 TCRLILDEVKQKHMYDAA 505
T I+ + ++ M D A
Sbjct: 543 TYGTIISALCKQEMVDKA 560
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 124/235 (52%), Gaps = 11/235 (4%)
Query: 140 MVDILGKVRQMDQMRALLEEM-SKG---HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
+++ L K +++D+ LL M +KG + ++ NT+ R AG+W+ A+ TF E+
Sbjct: 369 VINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCR---AGKWKKAMTTFKEML 425
Query: 196 TFGLEKNTETMNLLLDTLCK---EGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKIN 251
G++ T N+L+D LCK EG+++ A ++F ++ P+ T++ I G K
Sbjct: 426 KRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAG 485
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
++D+A+ + M+ GC P V +Y+++I C + EL M +GC P+ +TY
Sbjct: 486 KLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYG 545
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
T++S L K ++A+ + + G P S + LI L +RV EA+ + Q
Sbjct: 546 TIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKLLQ 600
>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
Length = 556
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 179/380 (47%), Gaps = 45/380 (11%)
Query: 117 ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMR 176
A+ F WAG GY+H Y ++DIL K GH
Sbjct: 10 AIQFFDWAGEQDGYKHDVHSYNHLLDILVK---------------SGH------------ 42
Query: 177 RFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPP 235
+F ++D + + G N T +L+ CK G+ A L + P
Sbjct: 43 QFRTGKVYKDLLHS-------GCSPNLVTFKILIRGNCKAGQATRALEFLRALDEFSVAP 95
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
+ + FN IHG K D+A + M+ +P + +Y+T+I C+ N K ELL
Sbjct: 96 DVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELL 155
Query: 296 DEMQAQG--CPPNVVTYTTVMSY-LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
+EM +G P++VTY T+++ + K GD EEA+ I + MK+ G PD +N +I+ L
Sbjct: 156 EEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHAL 215
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
A RV EA + + +PD TFNT++ F G +A VLEEM + E+ P
Sbjct: 216 CVAGRVVEAAEILKTM----SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCR-ENILP 270
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
+V T+ L+ + G+ + LL+++V + ++ D+ YT ++ GLC++ + E A+
Sbjct: 271 DVITYTILVNGLCRVGQV-QVAFYLLEEIVRQGYIP-DVIAYTSLVDGLCKSGEIEEAHK 328
Query: 473 LFKEMIGHDITPRYQTCRLI 492
L KEM +I + ++
Sbjct: 329 LVKEMSAREILAEMVSINMV 348
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 111/406 (27%), Positives = 190/406 (46%), Gaps = 26/406 (6%)
Query: 95 AIQPSHYLVNKLIHR-FKD-DWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQ 152
++ P Y+ N LIH FKD + A+ +F S Y ++ L K +++
Sbjct: 92 SVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSR-VNPDIFTYNTVISGLCKSGNLEK 150
Query: 153 MRALLEEM------SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETM 206
R LLEEM S IVT NT+ + G E+A+ D + G + T
Sbjct: 151 ARELLEEMIRRGGKSAPDIVTYNTL--INAGICKDGDVEEALEILDGMKLAGPAPDVITY 208
Query: 207 NLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
N ++ LC G+V A + L+ SC P+ TFN + G+CK + A ++EM
Sbjct: 209 NSIIHALCVAGRVVEAAEI-LKTMSC-SPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRE 266
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
P VI+Y+ ++ CR + LL+E+ QG P+V+ YT+++ L KSG+ EEA
Sbjct: 267 NILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEA 326
Query: 327 IRITEKMKI---------VGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
++ ++M + P +N ++ L + + +AV + ++ G PD
Sbjct: 327 HKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLIS-DLVARGYVPD 385
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
T+NT+I +A + +EM L C PN T ++ + G+ D+ S L
Sbjct: 386 VVTYNTLIDGLCKANRVREACDLADEMASL-GCFPNDVTLGSVVFGLCRVGRVDDAWS-L 443
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
+ +M K H + ++ YT +I GLC++++ + A ++ M G +
Sbjct: 444 VVEMSRKRH-APNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVA 488
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 157/315 (49%), Gaps = 15/315 (4%)
Query: 175 MRRFSGAGQWEDAVRTFDELG-TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSC 232
MRR S + + A++ FD G G + + + N LLD L K G V+ +L S
Sbjct: 1 MRRSS---RPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSG 57
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
PN TF I I G CK + A ++ + P V ++ +I + N +
Sbjct: 58 CSPNLVTFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAV 117
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK--PDSRFFNCLIY 350
+L + M++ P++ TY TV+S L KSG+ E+A + E+M G K PD +N LI
Sbjct: 118 KLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLIN 177
Query: 351 T-LGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH 409
+ + V+EA+ + M G APD T+N++I G +A +L+ M+
Sbjct: 178 AGICKDGDVEEALEILD-GMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMS---- 232
Query: 410 CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEW 469
C P++ TF+ LL K G L ++L++M ++ L D+ TYT++++GLCR + +
Sbjct: 233 CSPDLVTFNTLLDGFCKAGMLPRAL-EVLEEMCRENILP-DVITYTILVNGLCRVGQVQV 290
Query: 470 AYLLFKEMIGHDITP 484
A+ L +E++ P
Sbjct: 291 AFYLLEEIVRQGYIP 305
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 123/259 (47%), Gaps = 12/259 (4%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++V+ L +V Q+ LLEE+ + G+I + ++ +G+ E+A + E+
Sbjct: 275 YTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMS 334
Query: 196 ---------TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIH 245
+ + T N++L L K+G + A S+ +L + P+ T+N I
Sbjct: 335 AREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLID 394
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G CK NRV EA EM GC P ++ +++ CR + L+ EM + P
Sbjct: 395 GLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAP 454
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
NVV YT+++ L KS ++A + + M+ G D + LI ++ RV EA+ +Y
Sbjct: 455 NVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMY 514
Query: 366 QVEMPENGVAPDTSTFNTM 384
EM G PD ST T+
Sbjct: 515 D-EMVARGFLPDGSTSKTL 532
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 127/280 (45%), Gaps = 14/280 (5%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
+ ++D K + + +LEEM + +I+ + T ++ GQ + A +E+
Sbjct: 240 FNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIV 299
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVE---------LARSVFLELKSC--IPPNAHTFNIFI 244
G + L+D LCK G++E AR + E+ S +PP T+NI +
Sbjct: 300 RQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPP-LFTYNIVL 358
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
G K + +A I ++ G P V++Y+T+I C+ + +L DEM + GC
Sbjct: 359 GGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCF 418
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
PN VT +V+ L + G ++A + +M P+ + LI L ++ R+ +A V
Sbjct: 419 PNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVV 478
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
M GVA D + +I H G +A + +EM
Sbjct: 479 LDA-MRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEM 517
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 90/190 (47%), Gaps = 2/190 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +++ L K + + +L+ ++ ++G++ + T ++ A + +A DE+
Sbjct: 354 YNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMA 413
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
+ G N T+ ++ LC+ G+V+ A S+ +E+ + PN + I G CK +R+D
Sbjct: 414 SLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMD 473
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
+A + M+G G +Y +I S ++ + DEM A+G P+ T T+
Sbjct: 474 DACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGSTSKTLE 533
Query: 315 SYLAKSGDFE 324
+ FE
Sbjct: 534 EAAMSNSVFE 543
>gi|357134597|ref|XP_003568903.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Brachypodium distachyon]
Length = 537
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 199/411 (48%), Gaps = 14/411 (3%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS 161
+V +++ + + +W+ AL F WA P Y H Y M+DILG+++++ M L +E+
Sbjct: 114 VVLRVLQKQRSNWQVALLFFNWAAGLPAYAHGPRTYTEMLDILGRMKKVKLMTQLFDEIP 173
Query: 162 ---KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
+G +VT T A ++ R++GA + ++A+ F + +G E + +LL +LC+
Sbjct: 174 EERRGLVVTNRTFAVLLNRYAGAHKVQEAIEMFYKRKDYGFEVDLVGFQILLMSLCRYKH 233
Query: 219 VELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTI 278
VE A ++FL+ K PP ++NI ++GWC + +A+ ++ P + +Y T
Sbjct: 234 VEEAEALFLQKKDEFPPVIKSWNIILNGWCVKGSLPDAKRIWNQIIASKLKPDLFTYGTF 293
Query: 279 IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
I S + S +L M +G P+V ++ L EA+ I +M G
Sbjct: 294 INSLTKAGKLSTAVKLFTSMWEKGINPDVAICNCIIDQLCFKKKIPEALDIFREMTDRGC 353
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
+ D +N LI + R E VY +M G +P+ T++ ++ +
Sbjct: 354 QADVATYNTLIKYFCKIRRT-EKVYELLDDMENKGCSPNNMTYSYILKTTE---KPKDVI 409
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
H+L+ M K C+ + T++ L+ + + + K + + Q+ D+M ++ D ++T+++
Sbjct: 410 HLLQRMEK-SGCRLDSDTYN-LILNLYVSMKYENGVQQVWDEM-ERNGSGPDQRSFTIMV 466
Query: 459 HGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIE 509
HGL + + A + M +TP +T R++ VK HM +E
Sbjct: 467 HGLHSQGRLDQALQYYTTMKSRGMTPEPRT-RIL---VKAIHMKKDGPAVE 513
>gi|75194072|sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74900, mitochondrial; AltName: Full=Protein
ORGANELLE TRANSCRIPT PROCESSING DEFECT 43; Flags:
Precursor
gi|5882733|gb|AAD55286.1|AC008263_17 Contains a PF|01535 DUF17 domain [Arabidopsis thaliana]
gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical protein; 69434-67986 [Arabidopsis thaliana]
Length = 482
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 197/398 (49%), Gaps = 9/398 (2%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSC-PGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM 160
LVN ++ R + AL F + + Y H + +++ +DI ++ + +L+ M
Sbjct: 58 LVNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRM 117
Query: 161 SKGHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV 219
I + T A V R++ AG+ + AV+ F + G ++ + N +LD LCK +V
Sbjct: 118 RSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRV 177
Query: 220 ELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
E A +F L+ + T+N+ ++GWC I R +A ++EM G +P + +Y+T++
Sbjct: 178 EKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTML 237
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
+ + R +E EM+ + C +VVTYTTV+ +G+ + A + ++M G
Sbjct: 238 KGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVL 297
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
P +N +I L + V+ AV +++ EM G P+ +T+N +I H G +
Sbjct: 298 PSVATYNAMIQVLCKKDNVENAVVMFE-EMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEE 356
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIH 459
+++ M E C+PN QT++ +++ + + ++ L L + M + L ++ TY ++I
Sbjct: 357 LMQRMEN-EGCEPNFQTYNMMIRYYSECSEVEKALG-LFEKMGSGDCLP-NLDTYNILIS 413
Query: 460 GLCRANKCE---WAYLLFKEMIGHDITPRYQTCRLILD 494
G+ + E A L EM+ PR T +L+
Sbjct: 414 GMFVRKRSEDMVVAGKLLLEMVERGFIPRKFTFNRVLN 451
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 121/262 (46%), Gaps = 3/262 (1%)
Query: 148 RQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN 207
R + L E + +G L T +++ F AGQ A F E+ E + T
Sbjct: 210 RTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYT 269
Query: 208 LLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
++ G+++ AR+VF E+ + + P+ T+N I CK + V+ A +EM
Sbjct: 270 TVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRR 329
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
G P V +Y+ +I+ FS+ EL+ M+ +GC PN TY ++ Y ++ + E+A
Sbjct: 330 GYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKA 389
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV--EMPENGVAPDTSTFNTM 384
+ + EKM P+ +N LI + R ++ V ++ EM E G P TFN +
Sbjct: 390 LGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVERGFIPRKFTFNRV 449
Query: 385 ITMFSHHGHHEKAFHVLEEMNK 406
+ G+ A +L +K
Sbjct: 450 LNGLLLTGNQAFAKEILRLQSK 471
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 114/242 (47%), Gaps = 6/242 (2%)
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
S+ I R + V+ L+ M++ P+ T+ V A +G ++A+++ M
Sbjct: 93 SFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNM 152
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
G D FN ++ L ++ RV++A +++ V DT T+N ++ +
Sbjct: 153 HEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSV--DTVTYNVILNGWCLIKR 210
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
KA VL+EM + PN+ T++ +LK F+ G+ L+ + K +D+ T
Sbjct: 211 TPKALEVLKEMVE-RGINPNLTTYNTMLKGFFRAGQIRHAWEFFLE--MKKRDCEIDVVT 267
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEAVM 512
YT V+HG A + + A +F EMI + P T ++ + K+ ++ +A E ++
Sbjct: 268 YTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMV 327
Query: 513 KK 514
++
Sbjct: 328 RR 329
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 138/478 (28%), Positives = 207/478 (43%), Gaps = 49/478 (10%)
Query: 41 IESYCSDGARLDHHQVL-------CVDSPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVC 93
I ++C G D +VL C SP L +VII + DE + LK+ V
Sbjct: 222 ISAHCKVGNVKDAKRVLLEMGEKGC--SPNLVTYNVIIGGLCRARLLDEAIE-LKRSMVD 278
Query: 94 NAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQM 153
+ P Y + LI+ F + +S R+ M
Sbjct: 279 KGLVPDLYTYDILINGFCMEKRS-------------------------------REAKLM 307
Query: 154 RALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTL 213
LLE + G T ++ F G E A R DE+ G+E N N LL+ +
Sbjct: 308 --LLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGV 365
Query: 214 CKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCV 272
CK GK+E A + E+ + + P++ T+++ I G C+ + A + EMK P V
Sbjct: 366 CKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTV 425
Query: 273 ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEK 332
++YS II CR N +L EM G PN V YTT+M+ AK G EE+ I E+
Sbjct: 426 LTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILER 485
Query: 333 MKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
M+ G PD +N LI +A R++EA Y +EM E + P+ T+ I +S G
Sbjct: 486 MREQGILPDVFCYNSLIIGFCKAKRMEEA-RTYLMEMLERRLRPNAHTYGAFIDGYSKAG 544
Query: 393 HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
E A EM PNV + L++ K G E S + + D+
Sbjct: 545 EMEIADRYFNEMLSC-GVLPNVGIYTALIEGHCKEGNVTEAFSVF--RFILSRRVLQDVQ 601
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR-YQTCRLILDEVKQKHMYDAAEKIE 509
TY+++IHGL R K A+ +F E+ + P + LI KQ ++ A++ +E
Sbjct: 602 TYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLE 659
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/387 (27%), Positives = 179/387 (46%), Gaps = 44/387 (11%)
Query: 146 KVRQMDQMRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTE 204
K ++M++ R L EM + + +T + +S AG+ E A R F+E+ + G+ N
Sbjct: 507 KAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVG 566
Query: 205 TMNLLLDTLCKEGKVELARSVF-------------------------------------L 227
L++ CKEG V A SVF L
Sbjct: 567 IYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSEL 626
Query: 228 ELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYN 287
+ K +P NA T+N I G CK VD+A ++EM G +P +++Y+ +I C+
Sbjct: 627 QEKGLLP-NAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGE 685
Query: 288 FSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNC 347
+ L D+++ +G PN VTY ++ KS + A ++ E+M + G PD+ +N
Sbjct: 686 IERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNV 745
Query: 348 LIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKL 407
++ + + ++A+ ++Q EM E G A T +FNT+I + G ++A H+LEEM +
Sbjct: 746 ILNFCCKEEKFEKALDLFQ-EMLEKGFA-STVSFNTLIEGYCKSGKLQEANHLLEEMIEK 803
Query: 408 EHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKC 467
+ PN T+ L+ K G E L+ + + ++ TYT ++HG
Sbjct: 804 QFI-PNHVTYTSLIDHNCKAGMMGEAKRLWLE--MQERNVMPTAKTYTSLLHGYHNIGNM 860
Query: 468 EWAYLLFKEMIGHDITPRYQTCRLILD 494
LF+EM+ I P T +++D
Sbjct: 861 SEVSALFEEMVAKGIEPDKMTYYVMID 887
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 178/382 (46%), Gaps = 7/382 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G + ++ +Y ++ K ++++ R +LE M +G + + ++ F A + E+A
Sbjct: 455 GLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEA 514
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHG 246
E+ L N T +D K G++E+A F E+ SC + PN + I G
Sbjct: 515 RTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEG 574
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
CK V EA + + V +YS +I R + + + E+Q +G PN
Sbjct: 575 HCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPN 634
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
TY +++S K G+ ++A ++ E+M I G PD +N LI L +A ++ A ++
Sbjct: 635 AFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFD 694
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
++ G+ P+ T+ M+ + + AF +LEEM L P+ ++ +L C K
Sbjct: 695 -DIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEM-LLRGVPPDAFIYNVILNFCCK 752
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
K ++ L L +M+ K S ++ +I G C++ K + A L +EMI P +
Sbjct: 753 EEKFEKALD-LFQEMLEKGFAS--TVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNH 809
Query: 487 QTCRLILDEVKQKHMYDAAEKI 508
T ++D + M A+++
Sbjct: 810 VTYTSLIDHNCKAGMMGEAKRL 831
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 163/345 (47%), Gaps = 21/345 (6%)
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-C 232
+M + G +AV F F + + N LL L K KVEL VF + +
Sbjct: 151 LMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHK 210
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
+ P+ +T+ I CK+ V +A+ + EM GC P +++Y+ II CR +
Sbjct: 211 VLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAI 270
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
EL M +G P++ TY +++ EA + +M VG KP+ +N LI
Sbjct: 271 ELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGF 330
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
R +++A + + EM G+ + +NT++ G EKA +++EM + + +P
Sbjct: 331 MRQGDIEQAFRI-KDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMME-KGVEP 388
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
+ QT+ L++ + G+ +LLD+M K L+ + TY+++I+GLCR +
Sbjct: 389 DSQTYSLLIEGHCR-GQNMARAFELLDEM-KKRKLAPTVLTYSVIINGLCRCGNLQGTNA 446
Query: 473 LFKEMIGHDITP----------------RYQTCRLILDEVKQKHM 501
+ +EM+ + + P R + R+IL+ ++++ +
Sbjct: 447 ILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGI 491
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 139/281 (49%), Gaps = 5/281 (1%)
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYEL 294
PN+ F++ + + K+ + EA K P ++S ++++ + +++
Sbjct: 143 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKV 202
Query: 295 LDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGR 354
D M A P+V TYT ++S K G+ ++A R+ +M G P+ +N +I L R
Sbjct: 203 FDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCR 262
Query: 355 ASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNV 414
A + EA+ + + M + G+ PD T++ +I F +A +L EM + KP
Sbjct: 263 ARLLDEAIELKR-SMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDV-GLKPEP 320
Query: 415 QTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLF 474
T++ L+ + G ++ ++ D+MV + ++ + +++G+C+A K E A +
Sbjct: 321 ITYNALIDGFMRQGDIEQAF-RIKDEMV-ACGIEANLIIWNTLLNGVCKAGKMEKALEIM 378
Query: 475 KEMIGHDITPRYQTCRLILD-EVKQKHMYDAAEKIEAVMKK 514
+EM+ + P QT L+++ + ++M A E ++ + K+
Sbjct: 379 QEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKR 419
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 129/277 (46%), Gaps = 2/277 (0%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAV 188
G + IY ++++ K + ++ L +EM + + + ++ + +G+ ++A
Sbjct: 735 GVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEAN 794
Query: 189 RTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGW 247
+E+ N T L+D CK G + A+ ++LE++ + P A T+ +HG+
Sbjct: 795 HLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGY 854
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
I + E +EM G P ++Y +I +YCR+ N + +L DE+ +G P +V
Sbjct: 855 HNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSV 914
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
Y ++ L K +F E +++ ++ G + + + A + EA V +
Sbjct: 915 AAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLR- 973
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
M + G +T++ ++ + + E + ++L++M
Sbjct: 974 SMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 1010
>gi|326524964|dbj|BAK04418.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 565
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 204/400 (51%), Gaps = 8/400 (2%)
Query: 90 DHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQ 149
D + ++ P LV +++ + AL FRWA G+ ++++ + +++ LGK++Q
Sbjct: 137 DALGASVSPQ--LVAEVLKNLSNAGILALAFFRWAERQQGFVYTADSFHNLIEALGKIKQ 194
Query: 150 MDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLL 209
+ +L+E M +++ +T ++RR++ A + ++AV TF+++ FGL+ + N L
Sbjct: 195 FRLVWSLVEAMRCRGLLSKDTFRLIVRRYARARKVKEAVETFEKMAGFGLKADLSDYNWL 254
Query: 210 LDTLCKEGKVELARSVFLELK--SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG 267
+D L K +V+ A ++F E+K P+ T+ + + GW + + QEM G
Sbjct: 255 IDVLSKSKQVKKAHAIFKEMKRNGRFVPDLKTYTVLMEGWGHEKDLLMLKSVYQEMLDAG 314
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
P V++Y +I S+C+ + ++ EM+ GC P+ Y +++ L +EA+
Sbjct: 315 LQPDVVAYGMLISSFCKSGKCDEAIKVFREMETNGCMPSPHVYCMLINGLGSEERLDEAL 374
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITM 387
+ E K G + N ++ R+S+ Q A + EM ++G+ P++ T++ ++
Sbjct: 375 KYFELSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVD-EMRKSGIGPNSRTYDIILHH 433
Query: 388 FSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHL 447
E+A++V + M+K + C+P + T+ ++ + D L ++ + M K L
Sbjct: 434 LIKSQKIEEAYNVFQGMSK-DGCEPQLNTYTMMVGMFCSNERVDVAL-KVWNQMKEKGVL 491
Query: 448 SLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
+ ++ +I+GLC N+ E A F+EM+ I P Q
Sbjct: 492 PC-MHMFSALINGLCFENRLEEACAYFQEMLDRGIRPPGQ 530
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 115/265 (43%), Gaps = 5/265 (1%)
Query: 83 VFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWK--SALGIFRWAGSCPGYEHSSEIYEMM 140
+ +S+ Q+ + +QP LI F K A+ +FR G S +Y M+
Sbjct: 302 MLKSVYQEMLDAGLQPDVVAYGMLISSFCKSGKCDEAIKVFREM-ETNGCMPSPHVYCML 360
Query: 141 VDILGKVRQMDQMRALLE-EMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGL 199
++ LG ++D+ E + G + + T V+ + + +++ A + DE+ G+
Sbjct: 361 INGLGSEERLDEALKYFELSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDEMRKSGI 420
Query: 200 EKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQW 258
N+ T +++L L K K+E A +VF + K P +T+ + + +C RVD A
Sbjct: 421 GPNSRTYDIILHHLIKSQKIEEAYNVFQGMSKDGCEPQLNTYTMMVGMFCSNERVDVALK 480
Query: 259 TIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLA 318
+MK G PC+ +S +I C + + EM +G P ++ + L
Sbjct: 481 VWNQMKEKGVLPCMHMFSALINGLCFENRLEEACAYFQEMLDRGIRPPGQLFSNLKEALI 540
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSR 343
+ G A + K+ + P R
Sbjct: 541 EGGRISLAQEMALKLDELRKTPMRR 565
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 107/237 (45%), Gaps = 5/237 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G + Y M++ K + D+ + EM + G + + + ++ + ++A
Sbjct: 314 GLQPDVVAYGMLISSFCKSGKCDEAIKVFREMETNGCMPSPHVYCMLINGLGSEERLDEA 373
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHG 246
++ F+ G T N ++ C+ K + A + E+ KS I PN+ T++I +H
Sbjct: 374 LKYFELSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDEMRKSGIGPNSRTYDIILHH 433
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
K +++EA Q M GC P + +Y+ ++ +C ++ ++M+ +G P
Sbjct: 434 LIKSQKIEEAYNVFQGMSKDGCEPQLNTYTMMVGMFCSNERVDVALKVWNQMKEKGVLPC 493
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL---GRASRVQE 360
+ ++ +++ L EEA ++M G +P + F+ L L GR S QE
Sbjct: 494 MHMFSALINGLCFENRLEEACAYFQEMLDRGIRPPGQLFSNLKEALIEGGRISLAQE 550
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/406 (27%), Positives = 185/406 (45%), Gaps = 41/406 (10%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLN-TIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +V+ L K R MD+ A+L +M ++ N T ++ +S GQW++AVR ++
Sbjct: 254 YNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMT 313
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVF----------------------------- 226
+ G+ + T+N L+ +LCK GK++ AR VF
Sbjct: 314 SQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLV 373
Query: 227 -------LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
L L I P++H FN+ I + K +D A EM+ G P V++YST+I
Sbjct: 374 DLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVI 433
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
+ CR E ++M QG P++ TY ++ GD +A + +M G +
Sbjct: 434 AALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMR 493
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
PD FN +I L + RV +A ++ + G+ P+ +NT++ + G E A
Sbjct: 494 PDIGCFNFIINNLCKLGRVMDAQNIFDFTI-SIGLHPNVMVYNTLMDGYCLVGKMENALR 552
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIH 459
V + M +PNV + L+ K G+ DE LS L ++++K + T Y +++H
Sbjct: 553 VFDVMVS-AGIQPNVVVYGTLVNGYCKVGRIDEGLS-LFREILHK-GIKPSTTLYNIILH 609
Query: 460 GLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
GL +A + A + F EM I T ++L + + D A
Sbjct: 610 GLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEA 655
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 161/354 (45%), Gaps = 14/354 (3%)
Query: 148 RQMDQMRALLEEMSKGHIVTL-NTIA--KVMRRFSGAGQWEDAVRTFDELGTFGLEKNTE 204
R+ Q LL M++G V L N +A V+ F G A F+E+ G+ +
Sbjct: 193 RKSGQADELLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLS 252
Query: 205 TMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQE 262
T N +++ LCK ++ A ++ ++ K +P N T+N I+G+ + EA ++
Sbjct: 253 TYNCVVNALCKARAMDKAEAILRQMVDKGVLPDN-WTYNSLIYGYSSTGQWKEAVRVSKK 311
Query: 263 MKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGD 322
M G P V++ ++++ S C+ ++ D M +G ++ +Y +++ A G
Sbjct: 312 MTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGC 371
Query: 323 FEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFN 382
+ + M G PDS FN LI + + A ++ EM E GV PD T++
Sbjct: 372 LVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFN-EMREQGVEPDVVTYS 430
Query: 383 TMITMFSHHGHHEKAFHVLEEMNKL--EHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDD 440
T+I G + A +E+ N++ + P++ T+H L++ G + L+
Sbjct: 431 TVIAALCRIGKMDDA---VEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKA-KDLVLQ 486
Query: 441 MVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
M+NK + DI + +I+ LC+ + A +F I + P ++D
Sbjct: 487 MMNK-GMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMD 539
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 144/320 (45%), Gaps = 8/320 (2%)
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEA- 256
L T +L+D + + +L + F + LK+ + + + + G C+ R EA
Sbjct: 104 LSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEAL 163
Query: 257 QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG--CPPNVVTYTTVM 314
+ M GC P V SY +++S C + ELL M G C PN V Y TV+
Sbjct: 164 DILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVI 223
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
K GD +A + +M G PD +NC++ L +A + +A + + +M + GV
Sbjct: 224 DGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILR-QMVDKGV 282
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
PD T+N++I +S G ++A V ++M + P+V T + L+ S K GK +
Sbjct: 283 LPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTS-QGILPDVVTLNSLMASLCKHGKIKDA- 340
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
+ D M K + DI +Y ++++G LF M+ I P +++
Sbjct: 341 RDVFDSMAMKGQKT-DIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIK 399
Query: 495 EVKQKHMYDAAEKIEAVMKK 514
+ M D A I M++
Sbjct: 400 AYAKCGMLDRATIIFNEMRE 419
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 134/284 (47%), Gaps = 7/284 (2%)
Query: 208 LLLDTLC---KEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
++L +LC K G+ + + E + PNA +N I G+ K V++A EM
Sbjct: 184 IVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMV 243
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
G P + +Y+ ++ + C+ K +L +M +G P+ TY +++ + +G ++
Sbjct: 244 QRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWK 303
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTM 384
EA+R+++KM G PD N L+ +L + ++++A V+ M G D ++ M
Sbjct: 304 EAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFD-SMAMKGQKTDIFSYKIM 362
Query: 385 ITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK 444
+ ++ G + M + P+ F+ L+K+ K G D + ++ + + +
Sbjct: 363 LNGYATKGCLVDLTELFNLMLS-DGIAPDSHIFNVLIKAYAKCGMLDR--ATIIFNEMRE 419
Query: 445 HHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ D+ TY+ VI LCR K + A F +MI + P T
Sbjct: 420 QGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSIST 463
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 139/314 (44%), Gaps = 9/314 (2%)
Query: 156 LLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK 215
+L+ M+KG + ++ G+ DA FD + GL N N L+D C
Sbjct: 484 VLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCL 543
Query: 216 EGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVIS 274
GK+E A VF + + + I PN + ++G+CK+ R+DE +E+ G P
Sbjct: 544 VGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTL 603
Query: 275 YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
Y+ I+ + EM G + TY+ V+ L K+ +EAI + +++
Sbjct: 604 YNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELH 663
Query: 335 IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHH 394
+ K D N +I + + RV+EA ++ + +G+ P T++ M+T G
Sbjct: 664 AMNVKIDITTLNIMIAGMFQIRRVEEAKDLF-ASISRSGLVPSVVTYSIMMTNLIKEGLV 722
Query: 395 EKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTY 454
E+A + M +PN Q + +++ + + + L +++ SLD +T
Sbjct: 723 EEADDMFSSMENAGCEQPNSQLLNHVVRELLEKREIVRAGTYL--SKIDERSFSLDHSTT 780
Query: 455 TLVI-----HGLCR 463
TL+I G CR
Sbjct: 781 TLLIDLFSSKGTCR 794
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 149/375 (39%), Gaps = 54/375 (14%)
Query: 65 PDI----DVIISKVHVGSSEDEV--FQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSAL 118
PD+ VI + +G +D V F + V +I H+L+ D K+
Sbjct: 424 PDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTH-GDLLKAKD 482
Query: 119 GIFRWAGSCPGYEHSSEIYEMMVDILGKV-RQMDQMRALLEEMSKG---HIVTLNTIAKV 174
+ + G + +++ L K+ R MD +S G +++ NT+
Sbjct: 483 LVLQMMNK--GMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTL--- 537
Query: 175 MRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCI 233
M + G+ E+A+R FD + + G++ N L++ CK G+++ S+F E L I
Sbjct: 538 MDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGI 597
Query: 234 PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
P+ +NI +HG + R A+ EM G +YS ++ + +
Sbjct: 598 KPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAIL 657
Query: 294 LLDEMQA-----------------------------------QGCPPNVVTYTTVMSYLA 318
L E+ A G P+VVTY+ +M+ L
Sbjct: 658 LFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLI 717
Query: 319 KSGDFEEAIRITEKMKIVG-SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
K G EEA + M+ G +P+S+ N ++ L + A Y ++ E + D
Sbjct: 718 KEGLVEEADDMFSSMENAGCEQPNSQLLNHVVRELLEKREIVRA-GTYLSKIDERSFSLD 776
Query: 378 TSTFNTMITMFSHHG 392
ST +I +FS G
Sbjct: 777 HSTTTLLIDLFSSKG 791
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 184/360 (51%), Gaps = 11/360 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKG-HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +++ K ++D+ +LE MS +VT NTI +R +G+ ++A+ D
Sbjct: 179 YNVLIGGYCKSGEIDKALEVLERMSVAPDVVTYNTI---LRSLCDSGKLKEAMEVLDRQL 235
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRV 253
+ T +L++ C + V A + E+ K C P+ T+N+ I+G CK R+
Sbjct: 236 QRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGC-KPDVVTYNVLINGICKEGRL 294
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
DEA + M +GC P VI+++ I++S C + LL +M +GC P+VVT+ +
Sbjct: 295 DEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNIL 354
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
+++L + AI + EKM G P+S +N L++ + ++ A+ ++ M G
Sbjct: 355 INFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEI-MVSRG 413
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
PD T+NT++T G + A +L +++ + C P + T++ ++ K GKT+
Sbjct: 414 CYPDIVTYNTLLTALCKDGKVDAAVEILNQLSS-KGCSPVLITYNTVIDGLTKVGKTEYA 472
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
+ +LL++M + L DI TY+ ++ GL R K + A +F +M G I P T I+
Sbjct: 473 V-ELLEEM-RRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIM 530
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 176/368 (47%), Gaps = 8/368 (2%)
Query: 149 QMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN 207
++++ LE M +G I + ++R F +G+ + A R + L G + T N
Sbjct: 121 ELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYN 180
Query: 208 LLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG 267
+L+ CK G+++ A V + + P+ T+N + C ++ EA +
Sbjct: 181 VLIGGYCKSGEIDKALEVLERMS--VAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRE 238
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
C+P VI+Y+ +I++ C + +LLDEM+ +GC P+VVTY +++ + K G +EAI
Sbjct: 239 CYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAI 298
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITM 387
+ M G KP+ N ++ ++ R +A + +M G +P TFN +I
Sbjct: 299 KFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLS-DMLRKGCSPSVVTFNILINF 357
Query: 388 FSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHL 447
+A VLE+M K C PN +++PLL + K D + + L+ MV++
Sbjct: 358 LCRKRLLGRAIDVLEKMPK-HGCVPNSLSYNPLLHGFCQEKKMDRAI-EYLEIMVSRGCY 415
Query: 448 SLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYD-AAE 506
DI TY ++ LC+ K + A + ++ +P T ++D + + + A E
Sbjct: 416 P-DIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVE 474
Query: 507 KIEAVMKK 514
+E + +K
Sbjct: 475 LLEEMRRK 482
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 172/356 (48%), Gaps = 13/356 (3%)
Query: 145 GKVRQ-MDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNT 203
GK+++ M+ + L+ ++T + + SG GQ A++ DE+ G + +
Sbjct: 222 GKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQ---AMKLLDEMRKKGCKPDV 278
Query: 204 ETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQE 262
T N+L++ +CKEG+++ A + S PN T NI + C R +A+ + +
Sbjct: 279 VTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSD 338
Query: 263 MKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGD 322
M GC P V++++ +I CR+ + ++L++M GC PN ++Y ++ +
Sbjct: 339 MLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKK 398
Query: 323 FEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFN 382
+ AI E M G PD +N L+ L + +V AV + ++ G +P T+N
Sbjct: 399 MDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILN-QLSSKGCSPVLITYN 457
Query: 383 TMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMV 442
T+I + G E A +LEEM + + KP++ T+ LL+ + GK DE + ++ DM
Sbjct: 458 TVIDGLTKVGKTEYAVELLEEMRR-KGLKPDIITYSTLLRGLGREGKVDEAI-KIFHDM- 514
Query: 443 NKHHLSL--DITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV 496
LS+ TY ++ GLC+A + A M+ P T ++++ +
Sbjct: 515 --EGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGI 568
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 153/293 (52%), Gaps = 12/293 (4%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++++ + K ++D+ L M K +++T N I +R G+W DA R
Sbjct: 281 YNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNII---LRSMCSTGRWMDAERLLS 337
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK--SCIPPNAHTFNIFIHGWCKI 250
++ G + T N+L++ LC++ + A V ++ C+P N+ ++N +HG+C+
Sbjct: 338 DMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVP-NSLSYNPLLHGFCQE 396
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
++D A ++ M GC+P +++Y+T++ + C+ E+L+++ ++GC P ++TY
Sbjct: 397 KKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITY 456
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
TV+ L K G E A+ + E+M+ G KPD ++ L+ LGR +V EA+ ++ +M
Sbjct: 457 NTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFH-DME 515
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
+ P T+N ++ +A L M + + CKP T+ L++
Sbjct: 516 GLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVE-KGCKPTEATYTILIEG 567
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 139/274 (50%), Gaps = 7/274 (2%)
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
NI + + ++E ++ M G P VI+ +++I+ +CR K +++ ++
Sbjct: 110 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILEN 169
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
G P+V+TY ++ KSG+ ++A+ + E+M + PD +N ++ +L + +++E
Sbjct: 170 SGAVPDVITYNVLIGGYCKSGEIDKALEVLERMSVA---PDVVTYNTILRSLCDSGKLKE 226
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
A+ V ++ + PD T+ +I + +A +L+EM K + CKP+V T++ L
Sbjct: 227 AMEVLDRQL-QRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRK-KGCKPDVVTYNVL 284
Query: 421 LKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH 480
+ K G+ DE + + L++M + + ++ T+ +++ +C + A L +M+
Sbjct: 285 INGICKEGRLDEAI-KFLNNMPS-YGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRK 342
Query: 481 DITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
+P T ++++ + +K + A + M K
Sbjct: 343 GCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPK 376
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 116/259 (44%), Gaps = 29/259 (11%)
Query: 41 IESYCSDGARLDHHQVL-------CVDSPRLPDIDVIIS----KVHVGSSEDEVFQSLKQ 89
+ S CS G +D ++L C SP + +++I+ K +G + D V + + +
Sbjct: 320 LRSMCSTGRWMDAERLLSDMLRKGC--SPSVVTFNILINFLCRKRLLGRAID-VLEKMPK 376
Query: 90 DHVCNAIQPSHYLVNKLIHRFKDDWK-----SALGIFRWAGSCPGYEHSSEIYEMMVDIL 144
H C P+ N L+H F + K L I G P Y ++ L
Sbjct: 377 -HGC---VPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIV----TYNTLLTAL 428
Query: 145 GKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNT 203
K ++D +L ++S KG L T V+ + G+ E AV +E+ GL+ +
Sbjct: 429 CKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDI 488
Query: 204 ETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQE 262
T + LL L +EGKV+ A +F +++ I P+A T+N + G CK + A +
Sbjct: 489 ITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAY 548
Query: 263 MKGHGCHPCVISYSTIIQS 281
M GC P +Y+ +I+
Sbjct: 549 MVEKGCKPTEATYTILIEG 567
>gi|297841875|ref|XP_002888819.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334660|gb|EFH65078.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 512
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/427 (23%), Positives = 217/427 (50%), Gaps = 18/427 (4%)
Query: 95 AIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMR 154
+++ S L+ +++ + + AL +F+WA + G++H++ Y +++ LGK++Q +
Sbjct: 91 SVKLSPALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIW 150
Query: 155 ALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLC 214
L+++M + +++ +T A + RR++ A + ++A+ F ++ +G + + N +LD L
Sbjct: 151 NLVDDMKQKKLLSKDTFALISRRYARARKVKEAITAFHKMEDYGFKMESSDFNRMLDILS 210
Query: 215 KEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCK---INRVDEAQWTIQEMKGHGCHP 270
K V A+ VF ++K P+ ++ I + GW + + RV+E EMK G P
Sbjct: 211 KSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVNE---VYGEMKDEGFEP 267
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRIT 330
V++Y II +YC+ + + +EM+ + C P+ + ++++ L +A+
Sbjct: 268 DVVAYGIIINAYCKAKKYDEAVRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFF 327
Query: 331 EKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSH 390
E+ K G ++ +N L+ + R+++A EM G+ P+ T++ ++
Sbjct: 328 ERSKSSGFPLEAPTYNALVGAYCWSQRMEDAFKTVD-EMRSKGIGPNARTYDIILHHLIR 386
Query: 391 HGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLD 450
++A+ V ++M+ C+P V T+ +++ + D + ++ D+M K L
Sbjct: 387 MQRTKEAYEVYQKMS----CEPTVSTYEIMVRMFCNKERLDMAI-KIWDEMKGKGVLP-G 440
Query: 451 ITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT-PRYQTCRL---ILDEVKQKHMYDAAE 506
+ ++ +I LC NK + A F EM+ I P + RL +LDE ++ + D A
Sbjct: 441 MHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHLFSRLKQTLLDEGRKDKVADLAV 500
Query: 507 KIEAVMK 513
K++ + K
Sbjct: 501 KMDRLRK 507
>gi|326531326|dbj|BAK05014.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 537
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 196/396 (49%), Gaps = 14/396 (3%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS 161
+V K++ + + +W+ AL F WA P YEH Y M+DILG+++++ MR L +E+
Sbjct: 114 VVLKVLQKQRSNWQVALLFFTWAAGLPTYEHGPRTYIEMLDILGRMKKVRLMRQLFDEIP 173
Query: 162 ---KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
+G +VT A ++ R++GA + ++A+ F + +G E + +LL +LC+
Sbjct: 174 EQRRGLVVTNRMFAVLLNRYAGAHKVQEAIEIFYKRNDYGFEVDLVGFQILLMSLCRYKH 233
Query: 219 VELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTI 278
VE A ++FL+ K PP ++NI ++GWC + +A+ E+ P + +Y T
Sbjct: 234 VEEAEALFLQKKDEFPPVIKSWNIILNGWCVKGSLPDAKRVWNEIIASKLKPDLFTYGTF 293
Query: 279 IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
I + + S +L M +G P+V ++ L EA++I +M G
Sbjct: 294 INALTKAGKLSTAVKLFTSMWEKGINPDVAICNCIIDQLCFKKKIPEALKIFGEMNDRGC 353
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
+ D +N LI + R E VY +M + G +P+ T+ ++ EK
Sbjct: 354 QADVATYNTLIKHFCKIRRT-EKVYELLDDMEKKGCSPNNMTYTYILKT------TEKPR 406
Query: 399 HVLEEMNKLEH--CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTL 456
V+ + ++E CK + T++ L+ + + + K ++ + Q+ ++M ++ D ++T+
Sbjct: 407 DVMNLIQRMEESGCKLDSDTYN-LILNLYVSMKYEKGVQQVWEEM-ERNGSGPDQRSFTI 464
Query: 457 VIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLI 492
++HGL + + A + M +TP +T L+
Sbjct: 465 MVHGLHSQGQLDQALQYYTTMKSRGMTPEPRTRILV 500
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/288 (20%), Positives = 107/288 (37%), Gaps = 43/288 (14%)
Query: 209 LLDTLCKEGKVELARSVFLEL---KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKG 265
+LD L + KV L R +F E+ + + F + ++ + ++V EA +
Sbjct: 152 MLDILGRMKKVRLMRQLFDEIPEQRRGLVVTNRMFAVLLNRYAGAHKVQEAIEIFYKRND 211
Query: 266 HGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEE 325
+G ++ + ++ S CR Y + E L + PP + ++ +++ G +
Sbjct: 212 YGFEVDLVGFQILLMSLCR-YKHVEEAEALFLQKKDEFPPVIKSWNIILNGWCVKGSLPD 270
Query: 326 AIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMI 385
A R+ ++ KPD + I L +A ++ AV ++ M E G+ PD + N +I
Sbjct: 271 AKRVWNEIIASKLKPDLFTYGTFINALTKAGKLSTAVKLF-TSMWEKGINPDVAICNCII 329
Query: 386 TMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKH 445
+A + EMN + C
Sbjct: 330 DQLCFKKKIPEALKIFGEMND---------------RGC--------------------- 353
Query: 446 HLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
D+ TY +I C+ + E Y L +M +P T IL
Sbjct: 354 --QADVATYNTLIKHFCKIRRTEKVYELLDDMEKKGCSPNNMTYTYIL 399
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 74/172 (43%), Gaps = 7/172 (4%)
Query: 342 SRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVL 401
+R F L+ A +VQEA+ ++ + + G D F ++ + H E+A +
Sbjct: 183 NRMFAVLLNRYAGAHKVQEAIEIF-YKRNDYGFEVDLVGFQILLMSLCRYKHVEEAEALF 241
Query: 402 EEMNKLEHCKPNVQTFHPLLKS-CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHG 460
+ K + P +++++ +L C K D ++ + + + L D+ TY I+
Sbjct: 242 --LQKKDEFPPVIKSWNIILNGWCVKGSLPD---AKRVWNEIIASKLKPDLFTYGTFINA 296
Query: 461 LCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
L +A K A LF M I P C I+D++ K A KI M
Sbjct: 297 LTKAGKLSTAVKLFTSMWEKGINPDVAICNCIIDQLCFKKKIPEALKIFGEM 348
>gi|242038757|ref|XP_002466773.1| hypothetical protein SORBIDRAFT_01g013990 [Sorghum bicolor]
gi|241920627|gb|EER93771.1| hypothetical protein SORBIDRAFT_01g013990 [Sorghum bicolor]
Length = 487
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/434 (23%), Positives = 208/434 (47%), Gaps = 19/434 (4%)
Query: 90 DHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWA-----GSCPGYEHSSEIYEMMVDIL 144
DH + P + +++ R + A F WA G C H+ Y +V L
Sbjct: 60 DHSGVRVTPE--VAERVLERLDNAGMLAYRFFEWARRQKRGGCA---HTVRSYHTVVASL 114
Query: 145 GKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTE 204
K+RQ M ++ M K + + T + +MR+++ A ++++AV TF+ + +G+ N
Sbjct: 115 AKIRQYQLMWDVVAVMRKEGVANVETFSIIMRKYARAQKFDEAVYTFNIMERYGVAHNLA 174
Query: 205 TMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
N LL LCK V A+ +F ++ + P+A T++I + GW + + + + +M
Sbjct: 175 AFNSLLGALCKSKNVRKAQEIFDKMNNRFSPDAKTYSILLEGWGRAPNLPKMREVYSDML 234
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
GC P +++Y ++ + C+ + ++ +M ++GC P Y+ ++ E
Sbjct: 235 AAGCQPDIVTYGIMVDALCKTGRVEEAVCVVQDMSSRGCQPTTFIYSVLVHTYGVDMRIE 294
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTM 384
+A+ M+ G PD +N L+ + + A V +M +G++P++ T+N +
Sbjct: 295 DAVATFLDMEKDGIVPDVVVYNALVTAFCKVKKFDNAFRVMD-DMEGHGISPNSRTWNII 353
Query: 385 ITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK 444
+ G ++A+ V M ++ CKP+ T+ ++K + K + L ++ M K
Sbjct: 354 LNTLISLGKDDEAYRVFRNM--IKRCKPDSDTYTMMIKMFCENDKIEMAL-KVWKYMRLK 410
Query: 445 HHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTC----RLILDEVKQKH 500
L + T++++I+GLC + A +L ++MI I P T +L+L E ++
Sbjct: 411 QFLP-SMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKEGRKDV 469
Query: 501 MYDAAEKIEAVMKK 514
+ EK++ ++++
Sbjct: 470 LDFLVEKMKMLIQE 483
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 105/216 (48%), Gaps = 1/216 (0%)
Query: 126 SCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQW 184
S G + ++ IY ++V G +++ A +M K IV + ++ F ++
Sbjct: 269 SSRGCQPTTFIYSVLVHTYGVDMRIEDAVATFLDMEKDGIVPDVVVYNALVTAFCKVKKF 328
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFI 244
++A R D++ G+ N+ T N++L+TL GK + A VF + P++ T+ + I
Sbjct: 329 DNAFRVMDDMEGHGISPNSRTWNIILNTLISLGKDDEAYRVFRNMIKRCKPDSDTYTMMI 388
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
+C+ ++++ A + M+ P + ++S +I C + S+ LL++M +G
Sbjct: 389 KMFCENDKIEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIR 448
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
P T+ + L K G + + EKMK++ +P
Sbjct: 449 PPGSTFGKLRQLLLKEGRKDVLDFLVEKMKMLIQEP 484
>gi|297720523|ref|NP_001172623.1| Os01g0816000 [Oryza sativa Japonica Group]
gi|56785065|dbj|BAD82704.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|125572420|gb|EAZ13935.1| hypothetical protein OsJ_03862 [Oryza sativa Japonica Group]
gi|255673815|dbj|BAH91353.1| Os01g0816000 [Oryza sativa Japonica Group]
Length = 530
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 115/419 (27%), Positives = 197/419 (47%), Gaps = 13/419 (3%)
Query: 93 CNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQ 152
C A S +V ++ R ++ +A FRWA + PGY M+ IL K R+ D
Sbjct: 107 CGATA-SEPVVVAVLDRLRNSCAAAHAAFRWASAQPGYAPGRHACHSMLAILAKHRRFDD 165
Query: 153 MRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDT 212
RALL++M + + + + ++RR+ A AV F L G + LL
Sbjct: 166 ARALLDQMRRSSLASPAAVMLLIRRYCAARDVAGAVAAFRALPNLGFRPGVAEFHGLLTA 225
Query: 213 LCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINR-VDEAQ--WTIQEMKGHGCH 269
LC+ V+ A + L + P +FN+ ++GWC + R V EA+ W E+K G
Sbjct: 226 LCRYKNVQDAEHLLLSSEKEFPFETKSFNVVLNGWCNMVRSVREAKRFWNAMEIK--GIK 283
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI 329
V+SY ++I + + + V +L + M+ G P+ Y V+ LAK EA +
Sbjct: 284 RDVVSYGSMISCFSKAGSLDTVMKLFNRMKEAGVIPDRKIYNAVVYALAKGQCVNEAKAL 343
Query: 330 TEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFS 389
M+ G PD+ FN LI L +A +VQEA + +M G++P TF+ ++ +
Sbjct: 344 VRSMEEKGVAPDTATFNSLIRPLCKARQVQEARKMLD-DMLGRGLSPSVRTFHALLDVAR 402
Query: 390 HHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSL 449
+ F +L++M +L+ C P + TF L++ F + + + +L M + LS
Sbjct: 403 ---SPIEVFDLLDKMKELQ-CDPEMDTFIMLIRK-FCRWRQHDSVEKLWSAM-PANGLSP 456
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
D + Y ++IHGL + E + ++EM P +T +I + + + A+ +
Sbjct: 457 DRSAYIVLIHGLFLNGRLEESAKYYEEMKAKGFPPEKKTEEMIQAWLSGRELAKASASV 515
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/303 (18%), Positives = 115/303 (37%), Gaps = 42/303 (13%)
Query: 209 LLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGC 268
+L L K + + AR++ +++ + + I +C V A + + G
Sbjct: 153 MLAILAKHRRFDDARALLDQMRRSSLASPAAVMLLIRRYCAARDVAGAVAAFRALPNLGF 212
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS-YLAKSGDFEEAI 327
P V + ++ + CR N LL + + P ++ V++ + EA
Sbjct: 213 RPGVAEFHGLLTALCRYKNVQDAEHLLLSSEKE-FPFETKSFNVVLNGWCNMVRSVREAK 271
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITM 387
R M+I G K D + +I +A + + ++ M E GV PD +N ++
Sbjct: 272 RFWNAMEIKGIKRDVVSYGSMISCFSKAGSLDTVMKLFN-RMKEAGVIPDRKIYNAVVYA 330
Query: 388 FSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHL 447
+ C V L++S + G +
Sbjct: 331 LAKG-----------------QC---VNEAKALVRSMEEKG------------------V 352
Query: 448 SLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQK-HMYDAAE 506
+ D T+ +I LC+A + + A + +M+G ++P +T +LD + ++D +
Sbjct: 353 APDTATFNSLIRPLCKARQVQEARKMLDDMLGRGLSPSVRTFHALLDVARSPIEVFDLLD 412
Query: 507 KIE 509
K++
Sbjct: 413 KMK 415
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 160/334 (47%), Gaps = 6/334 (1%)
Query: 178 FSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPN 236
F G E A R DE+ G+E N N LL+ +CK GK+E A + E+ + + P+
Sbjct: 321 FMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPD 380
Query: 237 AHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLD 296
+ T+++ I G C+ + A + EMK P V++YS II CR N +L
Sbjct: 381 SQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILR 440
Query: 297 EMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRAS 356
EM G PN V YTT+M+ AK G EE+ I E+M+ G PD +N LI +A
Sbjct: 441 EMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAK 500
Query: 357 RVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQT 416
R++EA Y +EM E + P+ T+ I +S G E A EM PNV
Sbjct: 501 RMEEA-RTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSC-GVLPNVGI 558
Query: 417 FHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKE 476
+ L++ K G E S + + D+ TY+++IHGL R K A+ +F E
Sbjct: 559 YTALIEGHCKEGNVTEAFSVF--RFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSE 616
Query: 477 MIGHDITPR-YQTCRLILDEVKQKHMYDAAEKIE 509
+ + P + LI KQ ++ A++ +E
Sbjct: 617 LQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLE 650
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/387 (27%), Positives = 179/387 (46%), Gaps = 44/387 (11%)
Query: 146 KVRQMDQMRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTE 204
K ++M++ R L EM + + +T + +S AG+ E A R F+E+ + G+ N
Sbjct: 498 KAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVG 557
Query: 205 TMNLLLDTLCKEGKVELARSVF-------------------------------------L 227
L++ CKEG V A SVF L
Sbjct: 558 IYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSEL 617
Query: 228 ELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYN 287
+ K +P NA T+N I G CK VD+A ++EM G +P +++Y+ +I C+
Sbjct: 618 QEKGLLP-NAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGE 676
Query: 288 FSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNC 347
+ L D+++ +G PN VTY ++ KS + A ++ E+M + G PD+ +N
Sbjct: 677 IERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNV 736
Query: 348 LIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKL 407
++ + + ++A+ ++Q EM E G A T +FNT+I + G ++A H+LEEM +
Sbjct: 737 ILNFCCKEEKFEKALDLFQ-EMLEKGFA-STVSFNTLIEGYCKSGKLQEANHLLEEMIEK 794
Query: 408 EHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKC 467
+ PN T+ L+ K G E L+ + + ++ TYT ++HG
Sbjct: 795 QFI-PNHVTYTSLIDHNCKAGMMGEAKRLWLE--MQERNVMPTAKTYTSLLHGYHNIGNM 851
Query: 468 EWAYLLFKEMIGHDITPRYQTCRLILD 494
LF+EM+ I P T +++D
Sbjct: 852 SEVSALFEEMVAKGIEPDKMTYYVMID 878
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 178/382 (46%), Gaps = 7/382 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G + ++ +Y ++ K ++++ R +LE M +G + + ++ F A + E+A
Sbjct: 446 GLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEA 505
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHG 246
E+ L N T +D K G++E+A F E+ SC + PN + I G
Sbjct: 506 RTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEG 565
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
CK V EA + + V +YS +I R + + + E+Q +G PN
Sbjct: 566 HCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPN 625
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
TY +++S K G+ ++A ++ E+M I G PD +N LI L +A ++ A ++
Sbjct: 626 AFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFD 685
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
++ G+ P+ T+ M+ + + AF +LEEM L P+ ++ +L C K
Sbjct: 686 -DIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEM-LLRGVPPDAFIYNVILNFCCK 743
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
K ++ L L +M+ K S ++ +I G C++ K + A L +EMI P +
Sbjct: 744 EEKFEKAL-DLFQEMLEKGFAS--TVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNH 800
Query: 487 QTCRLILDEVKQKHMYDAAEKI 508
T ++D + M A+++
Sbjct: 801 VTYTSLIDHNCKAGMMGEAKRL 822
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/439 (23%), Positives = 202/439 (46%), Gaps = 28/439 (6%)
Query: 91 HVCNA--IQPSHYLVNKLIHRFKDDWKSALG-IFRWAGSCPGYEHSSEIYEMMVDILGKV 147
++CN+ P+ L+ K I R D + LG I + SC G +S I++M++D K+
Sbjct: 110 NLCNSNWYGPASDLI-KCIIRNSDSPLAVLGSIVKCYRSCNGSPNSV-IFDMLMDSYRKM 167
Query: 148 RQM-DQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETM 206
+ + + L + +L + ++ + E + FD + + + T
Sbjct: 168 GFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTY 227
Query: 207 NLLLDTLCKEGKVELARSVFLEL------------------KSCIPPNAHTFNIFIHGWC 248
++ CK G V+ A+ V LE+ + P+ +T++I I+G+C
Sbjct: 228 TNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFC 287
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
R EA+ + EM G P I+Y+ +I + RQ + + + + DEM A G N++
Sbjct: 288 MEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLI 347
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
+ T+++ + K+G E+A+ I ++M G +PDS+ ++ LI R + A + E
Sbjct: 348 IWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLD-E 406
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M + +AP T++ +I G+ + +L EM + KPN + L+ + K G
Sbjct: 407 MKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREM-VMNGLKPNAVVYTTLMTAHAKEG 465
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ +E S+++ + + + + D+ Y +I G C+A + E A EM+ + P T
Sbjct: 466 RVEE--SRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHT 523
Query: 489 CRLILDEVKQKHMYDAAEK 507
+D + + A++
Sbjct: 524 YGAFIDGYSKAGEMEIADR 542
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 128/279 (45%), Gaps = 10/279 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLN--TIAKVMRRFSGAGQWEDAVRTFDEL 194
Y +++D L K ++++ + L +++ +G +T N T A ++ + + A + +E+
Sbjct: 664 YNILIDGLCKAGEIERAKNLFDDI-EGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEM 722
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVD 254
G+ + N++L+ CKE K E A +F E+ + +FN I G+CK ++
Sbjct: 723 LLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQ 782
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA ++EM P ++Y+++I C+ + L EMQ + P TYT+++
Sbjct: 783 EANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLL 842
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA------VYVYQVE 368
G+ E + E+M G +PD + +I R V EA + V +
Sbjct: 843 HGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMP 902
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKL 407
M ++G T + + F G+ ++A VL M K
Sbjct: 903 M-KSGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKF 940
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 87/208 (41%), Gaps = 22/208 (10%)
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
PN V + +M K G EA+ + K +P N L+ L + ++V+ V
Sbjct: 152 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKV 211
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
+ M + V PD T+ MI+ G+ + A VL EM +
Sbjct: 212 FD-GMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGE------------------ 252
Query: 425 FKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
K DE + +L MV+K L D+ TY ++I+G C + A L+ EMI + P
Sbjct: 253 -KARLLDEAI-ELKRSMVDKG-LVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKP 309
Query: 485 RYQTCRLILDEVKQKHMYDAAEKIEAVM 512
T ++D ++ + A +I+ M
Sbjct: 310 EPITYNALIDGFMRQGDIEQAFRIKDEM 337
>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
Length = 1039
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 122/440 (27%), Positives = 211/440 (47%), Gaps = 37/440 (8%)
Query: 67 IDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWK--SALGIFRWA 124
I V+I K + ++D + + N + P+ + +I + K +AL +F+
Sbjct: 434 ISVLIKKHRLKEAKDTL-----NEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLT 488
Query: 125 ---GSCP-GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRFS 179
G P + +SS IY ++ D +++ + AL+ +M + I + T +++
Sbjct: 489 EHEGCRPNAWTYSSLIYGLIQD-----QKLHKAMALITKMQEDGITPGVITYTTLIQGQC 543
Query: 180 GAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHT 239
++++A R F+ + GL + + N+L D LCK G+ E A S FL K + T
Sbjct: 544 KKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYS-FLVKKGVVLTKV-T 601
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+ + G+ K + A I++M GC +YS ++Q+ C+Q ++ +LD+M
Sbjct: 602 YTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMT 661
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
+G N+V YT ++S + K G + A + +M G KP + + I + + R++
Sbjct: 662 LRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIE 721
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
EA ++ EM NGVAPD T+N I H G+ + AF L+ M C+PN T+
Sbjct: 722 EAGHLIG-EMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMID-ASCEPNYWTYWL 779
Query: 420 LLKSCFKTGKTD---------------ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRA 464
LLK K + + + QLL+ MV KH L+ TY+ +I G C+A
Sbjct: 780 LLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMV-KHGLNPTAVTYSSIIAGFCKA 838
Query: 465 NKCEWAYLLFKEMIGHDITP 484
+ E A +L M+G DI+P
Sbjct: 839 TRLEEACVLLDHMLGKDISP 858
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 164/336 (48%), Gaps = 9/336 (2%)
Query: 151 DQMRALLE-EMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLL 209
D+ LL +++G T+ T ++ + A + +DA+R + + + + + +L
Sbjct: 374 DEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVL 433
Query: 210 LDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGC 268
+ L K+ +++ A+ E+ + + PN + I +CK+ +V A + + GC
Sbjct: 434 ISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGC 493
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
P +YS++I + K L+ +MQ G P V+TYTT++ K +F+ A R
Sbjct: 494 RPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFR 553
Query: 329 ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF 388
+ E M+ G PD + +N L L ++ R +EA Y + V + GV T+ +++ F
Sbjct: 554 LFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEA-YSFLV---KKGVVLTKVTYTSLVDGF 609
Query: 389 SHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
S G+ E A ++E+M E CK + T+ LL++ K K +E LS L D + +
Sbjct: 610 SKAGNTEFAAALIEKMVN-EGCKADSHTYSVLLQALCKQKKLNEALSIL--DQMTLRGVK 666
Query: 449 LDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
+I YT++I + + K + A +F EMI P
Sbjct: 667 GNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKP 702
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 153/300 (51%), Gaps = 6/300 (2%)
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEA 256
G N T LL+ LCKEG++ AR + E+ + + P+ T+N I G+CK R+ +A
Sbjct: 283 GCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDA 342
Query: 257 QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSY 316
M+G+GC+P +Y+++I C + ELL+ A+G P V+T+T +++
Sbjct: 343 LGIKTLMEGNGCNPDDWTYNSLIHGLCGG-KPDEAEELLNGAIARGFSPTVITFTNIING 401
Query: 317 LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
K+ ++A+R+ M K D + + LI L + R++EA E+ NG++P
Sbjct: 402 YCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLN-EIFANGLSP 460
Query: 377 DTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQ 436
+ + ++I + G A V + + + E C+PN T+ L+ + K + ++
Sbjct: 461 NVVIYTSIIDAYCKVGKVGAALEVFK-LTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMA- 518
Query: 437 LLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV 496
L + + ++ + TYT +I G C+ ++ + A+ LF+ M + +TP Q ++ D +
Sbjct: 519 -LITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDAL 577
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 171/407 (42%), Gaps = 30/407 (7%)
Query: 113 DWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVR------------------------ 148
D +AL F W PG+ H++ + ++ +L + R
Sbjct: 69 DPATALAFFEWVARRPGFRHTAASHAALLQLLARRRAPANYDKLVVSMISCSGTAEDMRE 128
Query: 149 QMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNL 208
+D ++A+ K ++ +R E + + +L GL +T T N
Sbjct: 129 AVDAIQAIRRAGGKRLALSPKCYNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNT 188
Query: 209 LLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG 267
++ CKEG + +A F L+ S + + +T N + G+C+ + +A W + M G
Sbjct: 189 MIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMG 248
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
C SY+ +IQ C + LL M GC PN+ TYT ++ L K G +A
Sbjct: 249 CRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDAR 308
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITM 387
+ ++M G P +N +I ++ R+++A+ + + M NG PD T+N++I
Sbjct: 309 VLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGI-KTLMEGNGCNPDDWTYNSLIHG 367
Query: 388 FSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHL 447
G ++A +L P V TF ++ K K D+ L + ++
Sbjct: 368 LC-GGKPDEAEELLNGAIA-RGFSPTVITFTNIINGYCKAEKIDDALR--VKSIMISSKC 423
Query: 448 SLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
LD+ Y ++I L + ++ + A E+ + ++P I+D
Sbjct: 424 KLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIID 470
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/441 (21%), Positives = 184/441 (41%), Gaps = 74/441 (16%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +++ L + R + + LL M G L+T ++R G+ DA DE+
Sbjct: 256 YTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMP 315
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSV--FLELKSCIPPNAHTFNIFIHGWCKINRV 253
G+ + T N ++D CK G+++ A + +E C P+ T+N IHG C +
Sbjct: 316 RRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGC-NPDDWTYNSLIHGLCG-GKP 373
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCR----------------------------- 284
DEA+ + G P VI+++ II YC+
Sbjct: 374 DEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVL 433
Query: 285 ------QYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
++ + + L+E+ A G PNVV YT+++ K G A+ + + + G
Sbjct: 434 ISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGC 493
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
+P++ ++ LIY L + ++ +A+ + +M E+G+ P T+ T+I + AF
Sbjct: 494 RPNAWTYSSLIYGLIQDQKLHKAMALI-TKMQEDGITPGVITYTTLIQGQCKKHEFDNAF 552
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS----------------------- 435
+ E M + P+ Q ++ L + K+G+ +E S
Sbjct: 553 RLFEMMEQ-NGLTPDEQAYNVLTDALCKSGRAEEAYSFLVKKGVVLTKVTYTSLVDGFSK 611
Query: 436 --------QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
L++ MVN+ D TY++++ LC+ K A + +M +
Sbjct: 612 AGNTEFAAALIEKMVNEG-CKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIV 670
Query: 488 TCRLILDEVKQKHMYDAAEKI 508
+I+ E+ ++ +D A+ +
Sbjct: 671 AYTIIISEMIKEGKHDHAKSM 691
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 140/324 (43%), Gaps = 15/324 (4%)
Query: 156 LLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK 215
L++E VT NT+ + + G A R F L G+E +T T N LL C+
Sbjct: 174 LVQEGLLPDTVTYNTM---IMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCR 230
Query: 216 EGKVELA--RSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI 273
G + A + + L C N +++ I I G C+ V EA + M GC P +
Sbjct: 231 TGDLRKACWLLMMMPLMGC-RRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLH 289
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
+Y+ +I+ C++ LLDEM +G P+V TY ++ KSG ++A+ I M
Sbjct: 290 TYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLM 349
Query: 334 KIVGSKPDSRFFNCLIYTL--GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHH 391
+ G PD +N LI+ L G+ +E + G +P TF +I +
Sbjct: 350 EGNGCNPDDWTYNSLIHGLCGGKPDEAEELLN----GAIARGFSPTVITFTNIINGYCKA 405
Query: 392 GHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDI 451
+ A V M CK ++Q + L+ K + E L + N LS ++
Sbjct: 406 EKIDDALRVKSIMIS-SKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANG--LSPNV 462
Query: 452 TTYTLVIHGLCRANKCEWAYLLFK 475
YT +I C+ K A +FK
Sbjct: 463 VIYTSIIDAYCKVGKVGAALEVFK 486
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 97/467 (20%), Positives = 185/467 (39%), Gaps = 113/467 (24%)
Query: 77 GSSEDEVFQSLKQDHVCN---AIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCP----- 128
G + DE ++ D +C A + +LV K + K + S + F AG+
Sbjct: 562 GLTPDEQAYNVLTDALCKSGRAEEAYSFLVKKGVVLTKVTYTSLVDGFSKAGNTEFAAAL 621
Query: 129 -------GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRR 177
G + S Y +++ L K +++++ ++L++M+ KG+IV I M +
Sbjct: 622 IEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIK 681
Query: 178 FSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPN 236
G+ + A F+E+ + G + + T + + + CK G++E A + E+ ++ + P+
Sbjct: 682 ---EGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPD 738
Query: 237 AHTFNIFIHG----------WCKINRVDEAQ-----WT---------------------- 259
T+N+FI+G + + R+ +A WT
Sbjct: 739 VVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMSLANAHYVDTS 798
Query: 260 --------------IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
++ M HG +P ++YS+II +C+ + LLD M + P
Sbjct: 799 GMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISP 858
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N YT ++ FE+A +
Sbjct: 859 NEEIYTMLIKCCCDIKLFEKAAS------------------------------------F 882
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
M E G P +++ +IT G ++KA + ++ ++++ N + L
Sbjct: 883 VTNMIECGFQPHLESYHYLITGLCDEGDYDKAKALFCDLLEMDY-NHNEVAWKILNDGLL 941
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
K G D C SQLL M N+ H +D TY++V + + A+ +Y+
Sbjct: 942 KAGHVDIC-SQLLSAMENR-HCRIDSETYSMVTNNIHEASGMYESYM 986
>gi|449511317|ref|XP_004163923.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Cucumis sativus]
Length = 495
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 123/457 (26%), Positives = 218/457 (47%), Gaps = 23/457 (5%)
Query: 66 DIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFK---DDWKSALGIFR 122
+I+ + + SS ++ SL+ V S+ L++ ++ R + + AL F
Sbjct: 41 NIETVFRIITTSSSSTDMKHSLESSRVF----LSNELIDGVLKRVRFSHGNPLQALEFFN 96
Query: 123 WAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS--KGHIVTLNTIAKVMRRFSG 180
+ G+ H+S + M+ ILG+ R+ D++ +L ++ +++L T+ V+ R +
Sbjct: 97 YTAKRRGFYHTSFSVDTMLYILGRSRKFDKIWDVLLDVKFKDPSLISLRTVMVVLGRIAK 156
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTF 240
V +F + F E + N LL TLC+E + AR+V+ LKS PN TF
Sbjct: 157 VCSVRQTVESFRKFKKFVPEFDVTCFNALLRTLCQEKSMMDARNVYHGLKSMFRPNLQTF 216
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
NI + GW +EA+ EM G P V+SY+ ++ YC+ K ++++ +M+
Sbjct: 217 NILLSGW---KSSEEAEGFFDEMIEMGVKPDVVSYNCLVDVYCKNREMDKAFKVVGKMRD 273
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
+ P +V+TYT+++ L G ++A I ++MK G PD +N I A R+ E
Sbjct: 274 EDIPADVITYTSIIGGLGLVGQPDKARNILKEMKEYGCYPDVAAYNATIRNFCIAKRLHE 333
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
A + EM G++P+ +T+N +F + A+++ M C PN Q+ L
Sbjct: 334 AFDLLD-EMVNKGLSPNATTYNLFFRIFFWSNDLQSAWNLYRRMMD-TGCLPNTQSCLFL 391
Query: 421 LKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH 480
++ FK + +E +L +DM+ K S + + L LC K A F +M+
Sbjct: 392 VR-LFKKYEKEEMALELWNDMIQKGFGSYILVSEEL-FDLLCDLGKLIEAESCFLQMVDK 449
Query: 481 DITPRYQTCRLI--LDEVKQKHMYDAAEKIEAVMKKL 515
P Y + + I L E+ KH E ++ + KK+
Sbjct: 450 GHKPSYTSFKRIKVLMELANKH-----EALQNLSKKM 481
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/411 (27%), Positives = 199/411 (48%), Gaps = 15/411 (3%)
Query: 85 QSLKQDHVCNAIQPSHYLVNKLIHRF-----KDDWKSALGIFRWAGSCPGYEHSSEIYEM 139
++L Q + + + PS LIH DD + G CP S Y +
Sbjct: 30 RNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRG-CP---PSPVTYNV 85
Query: 140 MVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
M+D K +++ L+++M GH+ + T VM + + E+A+ F+E+ G
Sbjct: 86 MIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLG 145
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQ 257
N + N ++ LC++ K++ A VF E+++ IPP++ ++ I I G K +++EA
Sbjct: 146 CTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAY 205
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
Q M G P ++Y+ +I C Y + EL M+++GC P+ T+ ++
Sbjct: 206 KLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAH 265
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
K G +EA R+ ++M G PD ++ LI L +RV +A ++ + +M + P
Sbjct: 266 CKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLE-DMVKRQCKPT 324
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
T NT+I G ++A VL+ M P+V T++ L+ + G+T+ +L
Sbjct: 325 VVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQ-SPDVVTYNTLVHGHCRAGQTERA-REL 382
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
L DMV + L+ ++ TYT ++ GLC+AN+ A +F +M P T
Sbjct: 383 LSDMVAR-GLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFT 432
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 186/390 (47%), Gaps = 43/390 (11%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIA--KVMRRFSGAGQWEDAVRTFDEL 194
Y +++D L K +++ R L +++ VT +T+A ++ A ++DA F ++
Sbjct: 13 YGILIDGLAKAGKLNDARNLFQKLLHSG-VTPSTVAYTSLIHGLCMANSFDDARELFADM 71
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRV 253
G + T N+++D CK G +E A + ++ + P+ T+N + G CK +RV
Sbjct: 72 NRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRV 131
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
+EA EM+ GC P S++TII C+Q + ++ EM+A+ PP+ +Y +
Sbjct: 132 EEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGIL 191
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFN------CLIYTLGRA------------ 355
+ LAK+G EA ++ ++M G P + +N CL YTL A
Sbjct: 192 IDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGC 251
Query: 356 -----------------SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
++ EA + + M ++G PD T++T+I+ + A
Sbjct: 252 RPSRFTFNILIDAHCKRGKLDEAFRLLK-RMTDDGHVPDVVTYSTLISGLCSIARVDDAR 310
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
H+LE+M K CKP V T + L+ K G+ E ++LD MV+ S D+ TY ++
Sbjct: 311 HLLEDMVK-RQCKPTVVTQNTLIHGLCKAGRIKEA-REVLDAMVSSGQ-SPDVVTYNTLV 367
Query: 459 HGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
HG CRA + E A L +M+ + P T
Sbjct: 368 HGHCRAGQTERARELLSDMVARGLAPNVVT 397
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 164/342 (47%), Gaps = 39/342 (11%)
Query: 207 NLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKG 265
+L+D L K GK+ AR++F +L S + P+ + IHG C N D+A+ +M
Sbjct: 14 GILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNR 73
Query: 266 HGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEE 325
GC P ++Y+ +I + C++ + +L+ +M G P+VVTY TVM L KS EE
Sbjct: 74 RGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEE 133
Query: 326 AIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMI 385
A+ + +M+ +G P+ R N +I L + S++ +A V+ EM + PD+ ++ +I
Sbjct: 134 ALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFH-EMEAKDIPPDSWSYGILI 192
Query: 386 TMFSHHGHHEKAFHVLEEM------------NKLEH----------------------CK 411
+ G +A+ + + M N + H C+
Sbjct: 193 DGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCR 252
Query: 412 PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAY 471
P+ TF+ L+ + K GK DE +LL M + H+ D+ TY+ +I GLC + + A
Sbjct: 253 PSRFTFNILIDAHCKRGKLDEAF-RLLKRMTDDGHVP-DVVTYSTLISGLCSIARVDDAR 310
Query: 472 LLFKEMIGHDITPRYQTCR-LILDEVKQKHMYDAAEKIEAVM 512
L ++M+ P T LI K + +A E ++A++
Sbjct: 311 HLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMV 352
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 138/276 (50%), Gaps = 4/276 (1%)
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
+ P++ ++ I I G K ++++A+ Q++ G P ++Y+++I C +F
Sbjct: 6 VSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAR 65
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
EL +M +GCPP+ VTY ++ K G EEA + +KM G PD +N ++ L
Sbjct: 66 ELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGL 125
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
++SRV+EA+ ++ EM G P+ + NT+I ++A V EM + + P
Sbjct: 126 CKSSRVEEALLLFN-EMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEM-EAKDIPP 183
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
+ ++ L+ K GK +E +L M++ ++ TY +VIHG+C A + A
Sbjct: 184 DSWSYGILIDGLAKAGKLNEAY-KLFQRMLDS-GITPSAVTYNVVIHGMCLAYTLDEALE 241
Query: 473 LFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
LFK M P T +++D ++ D A ++
Sbjct: 242 LFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRL 277
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 159/353 (45%), Gaps = 6/353 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G S+ Y +++ + +D+ L + M SKG + T ++ G+ ++A
Sbjct: 215 GITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEA 274
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHG 246
R + G + T + L+ LC +V+ AR + ++ K P T N IHG
Sbjct: 275 FRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHG 334
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
CK R+ EA+ + M G P V++Y+T++ +CR + ELL +M A+G PN
Sbjct: 335 LCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPN 394
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
VVTYT ++S L K+ EA + +MK G P+ + LI A +V + ++
Sbjct: 395 VVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFG 454
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNK-LEHCKPNVQTFHPLLKSCF 425
EM G++PD + T+ G +A +L E + L + + +
Sbjct: 455 -EMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLL 513
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
+ GK + L + DMV L +LV GLC++ + A + +E++
Sbjct: 514 EAGKMEMALG-FVRDMVRGGQLPAPERCASLV-AGLCKSGQGGEARAVLEEIM 564
>gi|449466251|ref|XP_004150840.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Cucumis sativus]
Length = 495
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 123/457 (26%), Positives = 218/457 (47%), Gaps = 23/457 (5%)
Query: 66 DIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFK---DDWKSALGIFR 122
+I+ + + SS ++ SL+ V S+ L++ ++ R + + AL F
Sbjct: 41 NIETVFRIITTSSSSTDMKHSLESSRVF----LSNELIDGVLKRVRFSHGNPLQALEFFN 96
Query: 123 WAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS--KGHIVTLNTIAKVMRRFSG 180
+ G+ H+S + M+ ILG+ R+ D++ +L ++ +++L T+ V+ R +
Sbjct: 97 YTAKRRGFYHTSFSVDTMLYILGRSRKFDKIWDVLLDVKFKDPSLISLRTVMVVLGRIAK 156
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTF 240
V +F + F E + N LL TLC+E + AR+V+ LKS PN TF
Sbjct: 157 VCSVRQTVESFRKFKKFVPEFDVTCFNALLRTLCQEKSMMDARNVYHGLKSMFRPNLQTF 216
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
NI + GW +EA+ EM G P V+SY+ ++ YC+ K ++++ +M+
Sbjct: 217 NILLSGW---KSSEEAEGFFDEMIEMGVKPDVVSYNCLVDVYCKNREMDKAFKVVGKMRD 273
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
+ P +V+TYT+++ L G ++A I ++MK G PD +N I A R+ E
Sbjct: 274 EDIPADVITYTSIIGGLGLVGQPDKARNILKEMKEYGCYPDVAAYNATIRNFCIAKRLHE 333
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
A + EM G++P+ +T+N +F + A+++ M C PN Q+ L
Sbjct: 334 AFDLLD-EMVNKGLSPNATTYNLFFRIFFWSNDLQSAWNLYRRMMD-TGCLPNTQSCLFL 391
Query: 421 LKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH 480
++ FK + +E +L +DM+ K S + + L LC K A F +M+
Sbjct: 392 VR-LFKKYEKEEMALELWNDMIQKGFGSYILVSEEL-FDLLCDLGKLIEAESCFLQMVDK 449
Query: 481 DITPRYQTCRLI--LDEVKQKHMYDAAEKIEAVMKKL 515
P Y + + I L E+ KH E ++ + KK+
Sbjct: 450 GHKPSYTSFKRIKVLMELANKH-----EALQNLSKKM 481
>gi|242071011|ref|XP_002450782.1| hypothetical protein SORBIDRAFT_05g018050 [Sorghum bicolor]
gi|241936625|gb|EES09770.1| hypothetical protein SORBIDRAFT_05g018050 [Sorghum bicolor]
Length = 528
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 185/405 (45%), Gaps = 24/405 (5%)
Query: 115 KSALGIFRWAGSCPGYEHS---SEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTI 171
K AL + A P + ++ + Y+ +VD L + RQ D ++ + S + +
Sbjct: 98 KLALSLLHAARLHPSFVNTRPPPDAYDAVVDALARARQFDAAWRVVVDASADGAASPRSF 157
Query: 172 AKVMRRFSGAGQWEDAVRTFDELGTF-GLEKNTETMNLLLDTLCKEGKVELARSVFLELK 230
A + RR+ AG AVR FD++ F G E N+ LLDTLCK ++A +F + K
Sbjct: 158 AVLARRYVAAGMTRQAVRAFDDMEAFVGREANSAEFATLLDTLCKYKYPKVATEIFNKRK 217
Query: 231 SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCR------ 284
PN + I I+GWCK+NR D A+ +++M HG P +++Y+ ++ CR
Sbjct: 218 YKYNPNEKMYTILIYGWCKVNRNDMARKFLKDMLDHGIEPNIVTYNILLNGICRHASLHP 277
Query: 285 QYNFSKVY----ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
Y F + ++L EM+ +G P+V +Y+ ++ +++ E + + MK G P
Sbjct: 278 DYRFDRTVHSAEDVLKEMRDRGIEPDVTSYSIILHVYSRAHKPELCVCMFRSMKDRGICP 337
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
+ +I L R+++A + EM GV P +T+N + A +
Sbjct: 338 TVATYTSVIKCLASCGRLEDAETLLD-EMVAEGVCPSPATYNCFFKEYRGRNDVSGALQL 396
Query: 401 LEEMNKLEH-CKPNVQTFHPLLKSCFKT---GKTDECLSQLLDDMVNKHHLSLDITTYTL 456
+M + P++ T++ LL K G + S + + V D+ +YTL
Sbjct: 397 YNKMKQPGSLTAPDIHTYNILLGMFIKLNRHGSVKDIWSDMCESTVGP-----DLDSYTL 451
Query: 457 VIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHM 501
+IHG C + K A F EMI P+ T + + Q M
Sbjct: 452 LIHGFCASQKWREACQFFMEMIEKGFLPQKITFETLYRGLIQADM 496
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 94/230 (40%), Gaps = 15/230 (6%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G E Y +++ + + + + + M +G T+ T V++ + G+ EDA
Sbjct: 299 GIEPDVTSYSIILHVYSRAHKPELCVCMFRSMKDRGICPTVATYTSVIKCLASCGRLEDA 358
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK---SCIPPNAHTFNIFI 244
DE+ G+ + T N V A ++ ++K S P+ HT+NI +
Sbjct: 359 ETLLDEMVAEGVCPSPATYNCFFKEYRGRNDVSGALQLYNKMKQPGSLTAPDIHTYNILL 418
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
+ K+NR + +M P + SY+ +I +C + + + EM +G
Sbjct: 419 GMFIKLNRHGSVKDIWSDMCESTVGPDLDSYTLLIHGFCASQKWREACQFFMEMIEKGFL 478
Query: 305 PNVVTYTTVMSYLAKSGDF-----------EEAIRITEKMKIVGSKPDSR 343
P +T+ T+ L ++ EEA + ++ K+ KP R
Sbjct: 479 PQKITFETLYRGLIQADMLRTWRRLKRRVDEEAAKFGDEFKLYHMKPYKR 528
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 115/292 (39%), Gaps = 19/292 (6%)
Query: 234 PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
PP+A ++ + + + D A + + G S++ + + Y +
Sbjct: 119 PPDA--YDAVVDALARARQFDAAWRVVVDASADGAA-SPRSFAVLARRYVAAGMTRQAVR 175
Query: 294 LLDEMQA-QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
D+M+A G N + T++ L K + A I K K P+ + + LIY
Sbjct: 176 AFDDMEAFVGREANSAEFATLLDTLCKYKYPKVATEIFNKRK-YKYNPNEKMYTILIYGW 234
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG--HHEKAFH--------VLE 402
+ +R + + +M ++G+ P+ T+N ++ H H + F VL+
Sbjct: 235 CKVNR-NDMARKFLKDMLDHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVHSAEDVLK 293
Query: 403 EMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC 462
EM +P+V ++ +L + K + C+ + + + TYT VI L
Sbjct: 294 EMRD-RGIEPDVTSYSIILHVYSRAHKPELCVCMFRS--MKDRGICPTVATYTSVIKCLA 350
Query: 463 RANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
+ E A L EM+ + P T E + ++ A ++ MK+
Sbjct: 351 SCGRLEDAETLLDEMVAEGVCPSPATYNCFFKEYRGRNDVSGALQLYNKMKQ 402
>gi|356560073|ref|XP_003548320.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Glycine max]
Length = 466
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 116/404 (28%), Positives = 192/404 (47%), Gaps = 17/404 (4%)
Query: 95 AIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILG----KVRQM 150
I S LV ++HR + D K AL F WAG Y H Y M+DIL KV+Q
Sbjct: 18 GIPLSTPLVTGVLHRLRYDEKIALRFFTWAGHQEDYSHEPCAYNDMMDILSSTRYKVKQF 77
Query: 151 DQMRALLEEMSKGH--IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTE--TM 206
+ +LE M + + V + + ++R+++ ++ V+ F ++ E
Sbjct: 78 RIVCDVLEYMKRNNKTTVPVEVLLVILRKYTE--KYLTHVQKFARKRRIRVKTQPEINAF 135
Query: 207 NLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
NLLLD LCK VE A +++ +++ + PNA T+NIF+ GWC++ ++EM
Sbjct: 136 NLLLDALCKCCLVEDAETLYKKMRKTVKPNAETYNIFVFGWCRVRNPTRGMKLLEEMVEL 195
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG---CPPNVVTYTTVMSYLAKSGDF 323
G P +Y+T I +YC+ ++ +L + M+ +G P TY ++ LA+
Sbjct: 196 GHRPDNFAYNTAIDTYCKAGMVTEAVDLFEFMRTKGSSISSPTAKTYAIIIVALAQHDRM 255
Query: 324 EEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNT 383
EE ++ M G PD + +I + ++ EA Y + EM PD T+N
Sbjct: 256 EECFKLIGHMISSGCLPDVTTYKEIIEGMCVCGKIDEA-YKFLEEMGNKSYRPDIVTYNC 314
Query: 384 MITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVN 443
+ + + E A + M +L +C P+VQT++ L+ F+ D + +M N
Sbjct: 315 FLKVLCDNKKSEDALKLYGRMIEL-NCIPSVQTYNMLISMFFEIDDPDGAF-ETWQEMDN 372
Query: 444 KHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
+ DI TY+++I GL NK E A L +E+I I Y+
Sbjct: 373 R-GCRPDIDTYSVMIDGLFNCNKVEDACFLLEEVINKGIKLPYK 415
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 121/446 (27%), Positives = 213/446 (47%), Gaps = 27/446 (6%)
Query: 70 IISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLI------HRFKDDWKSALGIFRW 123
++ K S +E+F ++ + P Y N +I +F++ +K L +
Sbjct: 296 VLCKAGRLSEAEELFGQMETERAV----PCAYAYNTMIMGYGSAGQFENAYK-LLDQLKE 350
Query: 124 AGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQ 183
G P S + ++ LGK R++D+ L E M K +T ++ AG+
Sbjct: 351 RGCIP----SVVSFNSILTCLGKKRKVDEALTLFEAMKKDAEPNSSTYNIIIDMLCMAGK 406
Query: 184 WEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFN 241
E+A DE+ GL N T+N+++D LCK K E A +F + C PN+ T+
Sbjct: 407 VEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGC-NPNSVTYC 465
Query: 242 IFIHGWCKINRVDEAQWTIQEM--KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
I G K VD+A + M GH +P V Y+++I+++ +++ EM
Sbjct: 466 SLIDGLGKKGNVDDAYRLFENMLDTGHNANPVV--YTSLIRNFFMHGRKEDGHKIFKEMN 523
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
+GC P++ T M + K+GD E+ I E +K G PD R ++ LI+ L +A + +
Sbjct: 524 RRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQAR 583
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
E ++ M + G A D +N ++ F G +KA+ VLEEM K++ P V T+
Sbjct: 584 ETSSIFHA-MKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEM-KVKRVPPTVATYGS 641
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
++ K + DE + +L + + L++ Y+ +I G + + + AYL+ +EM+
Sbjct: 642 IIDGLAKIDRLDE--AYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMK 699
Query: 480 HDITPRYQTCRLILDE-VKQKHMYDA 504
+TP T ++D VK + + +A
Sbjct: 700 KGLTPNVYTWNSLMDALVKAEEINEA 725
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 107/427 (25%), Positives = 194/427 (45%), Gaps = 10/427 (2%)
Query: 62 PRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALG 119
P ++II + + +E + ++ + + P+ VN ++ R ++ A
Sbjct: 389 PNSSTYNIIIDMLCMAGKVEEAYM-IRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYE 447
Query: 120 IFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRF 178
+F A S G +S Y ++D LGK +D L E M GH ++R F
Sbjct: 448 MFETA-SQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNF 506
Query: 179 SGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNA 237
G+ ED + F E+ G + + +N +D + K G VE R++F ++K P+
Sbjct: 507 FMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDV 566
Query: 238 HTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDE 297
+++I IHG K + E MK G +Y+ ++ +C+ K YE+L+E
Sbjct: 567 RSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEE 626
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
M+ + PP V TY +++ LAK +EA + E+ K G + + ++ LI G+ R
Sbjct: 627 MKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGR 686
Query: 358 VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTF 417
+ EA Y+ EM + G+ P+ T+N+++ +A + M +++ C PN T+
Sbjct: 687 IDEA-YLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMK-CSPNTYTY 744
Query: 418 HPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
L+ + K ++ + + K L ++ TYT +I GL + A LF+
Sbjct: 745 SILINGLCRVQKYNKAF--VFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERF 802
Query: 478 IGHDITP 484
+ TP
Sbjct: 803 KANGGTP 809
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 169/370 (45%), Gaps = 5/370 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVM-RRFSGAGQWEDAVRTFDELG 195
Y M+ +L K ++ + L +M V M + AGQ+E+A + D+L
Sbjct: 290 YTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLK 349
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDE 255
G + + N +L L K+ KV+ A ++F +K PN+ T+NI I C +V+E
Sbjct: 350 ERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDAEPNSSTYNIIIDMLCMAGKVEE 409
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
A EM+ G P +++ + ++ C+ F YE+ + +GC PN VTY +++
Sbjct: 410 AYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLID 469
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
L K G+ ++A R+ E M G + + LI R ++ +++ EM G
Sbjct: 470 GLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFK-EMNRRGCQ 528
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS 435
PD + NT + G EK + E++ P+V+++ L+ K G+ E S
Sbjct: 529 PDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFL-PDVRSYSILIHGLTKAGQARET-S 586
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE 495
+ M + +LD Y V+ G C++ K + AY + +EM + P T I+D
Sbjct: 587 SIFHAM-KQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDG 645
Query: 496 VKQKHMYDAA 505
+ + D A
Sbjct: 646 LAKIDRLDEA 655
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 124/240 (51%), Gaps = 2/240 (0%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDA 187
G+ + Y +VD K ++D+ +LEEM + T+ T ++ + + ++A
Sbjct: 596 GFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEA 655
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHG 246
F+E + G+E N + L+D K G+++ A + E+ K + PN +T+N +
Sbjct: 656 YMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDA 715
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
K ++EA Q MK C P +YS +I CR ++K + EMQ QG PN
Sbjct: 716 LVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPN 775
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
VVTYTT+++ LAK G+ +A + E+ K G PD+ FN LI + A+R EA +V++
Sbjct: 776 VVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEAYHVFE 835
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 170/375 (45%), Gaps = 42/375 (11%)
Query: 140 MVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
+V L + R++D ++ M + + ++ + A Q E A+ ++ G
Sbjct: 153 LVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVG 212
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIH----------GW 247
E L+ L +EG+VE A ++ E+K SC+ P+ +N+ I W
Sbjct: 213 YEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAW 272
Query: 248 -------------------------CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSY 282
CK R+ EA+ +M+ PC +Y+T+I Y
Sbjct: 273 KFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGY 332
Query: 283 CRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDS 342
F Y+LLD+++ +GC P+VV++ ++++ L K +EA+ + E MK ++P+S
Sbjct: 333 GSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMK-KDAEPNS 391
Query: 343 RFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLE 402
+N +I L A +V+EA Y+ + EM G+ P+ T N M+ E A+ + E
Sbjct: 392 STYNIIIDMLCMAGKVEEA-YMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFE 450
Query: 403 EMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC 462
++ C PN T+ L+ K G D+ +L ++M++ H + + YT +I
Sbjct: 451 TASQ-RGCNPNSVTYCSLIDGLGKKGNVDDAY-RLFENMLDTGH-NANPVVYTSLIRNFF 507
Query: 463 RANKCEWAYLLFKEM 477
+ E + +FKEM
Sbjct: 508 MHGRKEDGHKIFKEM 522
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 117/231 (50%), Gaps = 4/231 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTI--AKVMRRFSGAGQWEDAVRTFDEL 194
Y ++D L K+ ++D+ L EE +K + LN I + ++ F G+ ++A +E+
Sbjct: 639 YGSIIDGLAKIDRLDEAYMLFEE-AKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEM 697
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRV 253
GL N T N L+D L K ++ A F +K PN +T++I I+G C++ +
Sbjct: 698 MKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKY 757
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
++A QEM+ G P V++Y+T+I + N + L + +A G P+ ++ +
Sbjct: 758 NKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNAL 817
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
+ ++ + EA + E+ ++ G + + + L+ L +A +++A V
Sbjct: 818 IEGMSHANRAIEAYHVFEETRLKGCRINVKACISLLDALNKAECLEQAAVV 868
>gi|2827705|emb|CAA16678.1| predicted protein [Arabidopsis thaliana]
Length = 598
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 118/462 (25%), Positives = 199/462 (43%), Gaps = 71/462 (15%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS 161
L+ ++++R D F WA P Y HS E+Y+ MV IL K+RQ + L+EEM
Sbjct: 108 LIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMR 167
Query: 162 KGH--IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV 219
K + ++ +++RF+ A + A+ DE+ FG E + LLD LCK G V
Sbjct: 168 KENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSV 227
Query: 220 ELARSVFLEL-------------------------------------------------- 229
+ A +F ++
Sbjct: 228 KDAAKLFEDMRMRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLR 287
Query: 230 ---KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQY 286
+ PNA+ + + I CK++R++EA EM+ + C V++Y+ ++ +C+
Sbjct: 288 DMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWG 347
Query: 287 NFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFN 346
K Y +LD+M +G P+ +TY +M K FEE + + EKM+ + PD +N
Sbjct: 348 KIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYN 407
Query: 347 CLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNK 406
+I + V+EAV ++ EM ENG++P TF MI + G +A +EM
Sbjct: 408 VVIRLACKLGEVKEAVRLWN-EMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEM-- 464
Query: 407 LEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANK 466
LL + K K E + + +K L++ ++T+ IH L
Sbjct: 465 ------------LLLNTVLKDKKL-EMAKDVWSCITSKGACELNVLSWTIWIHALFSKGY 511
Query: 467 CEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+ A EMI D P+ T ++ +K+ + + A +I
Sbjct: 512 EKEACSYCIEMIEMDFMPQPDTFAKLMKGLKKLYNREFAGEI 553
>gi|255548349|ref|XP_002515231.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545711|gb|EEF47215.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 505
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 123/442 (27%), Positives = 213/442 (48%), Gaps = 18/442 (4%)
Query: 66 DIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFK---DDWKSALGIFR 122
D++V+ + SS Q+LKQ I S+ L++K++ R + + AL F
Sbjct: 38 DVEVVYRIITSSSS----VQNLKQSLTSTGIFLSNDLIDKVLKRVRFSHGNPLQALEFFY 93
Query: 123 WAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKG--HIVTLNTIAKVMRRFSG 180
+ + G+ H+ + ++ ILG+ R+ D + +L +M + +++ T+ V+ R +
Sbjct: 94 YTDNRKGFYHTPYSLDTILYILGRSRKFDHIWDVLIKMKRKDRFLISPRTMQIVLARVAK 153
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTF 240
V +F + F +T N LL TLC+E + AR+V+ LK PN TF
Sbjct: 154 LCSVRQTVESFRKFKKFVSVLDTTCFNALLRTLCQEKSMTDARNVYHRLKKEFKPNLQTF 213
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
NI + GW + +EA+ +EM+ G P V+SY+++I YC+ K Y+++++M+
Sbjct: 214 NILLSGW---KQSEEAELFFEEMRELGIKPDVVSYNSLIDVYCKDREMEKAYKVVEKMRE 270
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
+ P+V+TYT+++ L G ++A I +MK G PD +N +I A R+ +
Sbjct: 271 EDISPDVITYTSIIGGLGLVGQPDKARDILNEMKEYGCYPDVAAYNAVIRNYCIAKRLGD 330
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
A + EM G++P+ +T+N +F ++ + M + C PN Q+ L
Sbjct: 331 ASNLMD-EMASKGLSPNATTYNLFFRVFYWSNDLRNSWSLYRRMME-SGCLPNTQSCMFL 388
Query: 421 LKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH 480
++ K K + L+ L +DMV K S I ++ LC K A F +MI
Sbjct: 389 IRLFRKHEKVEMALT-LWNDMVEKGFGSY-ILVSDVLFDLLCDMGKLVEAEKCFLQMIEK 446
Query: 481 DITPRYQTCRLI--LDEVKQKH 500
P + R I L E+ KH
Sbjct: 447 GHKPSNVSFRRIKVLMELVNKH 468
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 66/153 (43%), Gaps = 23/153 (15%)
Query: 377 DTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQ 436
DT+ FN ++ A +V + K KPN+QTF+ LL S +K + E +
Sbjct: 175 DTTCFNALLRTLCQEKSMTDARNVYHRLKK--EFKPNLQTFNILL-SGWKQSEEAELFFE 231
Query: 437 LLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT-------- 488
+ ++ + D+ +Y +I C+ + E AY + ++M DI+P T
Sbjct: 232 EMREL----GIKPDVVSYNSLIDVYCKDREMEKAYKVVEKMREEDISPDVITYTSIIGGL 287
Query: 489 --------CRLILDEVKQKHMYDAAEKIEAVMK 513
R IL+E+K+ Y AV++
Sbjct: 288 GLVGQPDKARDILNEMKEYGCYPDVAAYNAVIR 320
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/368 (29%), Positives = 180/368 (48%), Gaps = 45/368 (12%)
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIH 245
A F +G + + + N LL L KE K+ V+ E+ K I N +TFNIFI+
Sbjct: 149 AYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFIN 208
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE------------ 293
G C+ ++++A+ I++MK G P V++Y+T++ YC++ + K+Y+
Sbjct: 209 GLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANK 268
Query: 294 ----------LLD----------------EMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
L+D EMQ QG PN+VTY ++++ L +G EEAI
Sbjct: 269 ICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAI 328
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITM 387
+ +KM +G KP+ +N LI + ++EA V+ ++ + + P+ TFNTMI
Sbjct: 329 DLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFD-DVSKQELVPNVITFNTMIDA 387
Query: 388 FSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD-ECLSQLLDDMVNKHH 446
+ G E+ F + M E PNV T++ L+ + K D + +LL++M NK
Sbjct: 388 YCKEGMMEEGFSLCSSMLD-EGILPNVSTYNCLIAGLCR--KQDLQAAKELLNEMENKG- 443
Query: 447 LSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAE 506
L D+ TY ++I GLC+ +K A L EM + P + T ++D + AA
Sbjct: 444 LKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAAL 503
Query: 507 KIEAVMKK 514
+ M+K
Sbjct: 504 NVRTRMEK 511
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 171/368 (46%), Gaps = 9/368 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
+ + ++ L + ++++ +E+M ++VT NT+ + AG+ A
Sbjct: 203 FNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMK 262
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKIN 251
E+ + N T N L+D CK+ V A+ F E+ K + PN T+N I+G C
Sbjct: 263 EMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNG 322
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
+++EA +M G G P +++Y+ +I +C++ + ++ D++ Q PNV+T+
Sbjct: 323 KLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFN 382
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
T++ K G EE + M G P+ +NCLI L R +Q A + EM
Sbjct: 383 TMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLN-EMEN 441
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
G+ D T+N +I + A +L EM L KPN T++ L+ GK
Sbjct: 442 KGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNL-GLKPNHVTYNTLMDGYCMEGKLK 500
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRL 491
L+ + + K ++ TY ++I G C+ NK E A L EM+ + P T +
Sbjct: 501 AALN--VRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDI 558
Query: 492 ILDEVKQK 499
+ E+ +K
Sbjct: 559 VRLEMLEK 566
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 85/187 (45%), Gaps = 2/187 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
+ M+D K M++ +L M +G + ++T ++ + A +E+
Sbjct: 381 FNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEME 440
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVD 254
GL+ + T N+L+D LCK K A + E+ + + PN T+N + G+C ++
Sbjct: 441 NKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLK 500
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
A M+ P V++Y+ +I+ YC+ LL+EM +G PN TY V
Sbjct: 501 AALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIVR 560
Query: 315 SYLAKSG 321
+ + G
Sbjct: 561 LEMLEKG 567
Score = 38.5 bits (88), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Query: 411 KPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWA 470
K ++ + +PLL + K K + + + +M+ K + ++ T+ + I+GLCRA K A
Sbjct: 162 KLSLTSCNPLLSALVKENKIGD-VEYVYKEMI-KRRIHTNLNTFNIFINGLCRAGKLNKA 219
Query: 471 YLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
++M I+P T ++D ++ K EA MK++
Sbjct: 220 EDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEM 264
>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Brachypodium distachyon]
Length = 878
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 116/421 (27%), Positives = 207/421 (49%), Gaps = 28/421 (6%)
Query: 98 PSHYLVNKLI------HRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMD 151
P Y N +I RF D +K L R G P S + ++ LGK R++D
Sbjct: 314 PCAYAYNTMIMGYGSAERFDDAYK-LLERLRERGCIP----SVVSFNSILTCLGKKRKVD 368
Query: 152 QMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLD 211
+ L + M K ++T ++ AG+ +A + DE+ GL N ++N+++D
Sbjct: 369 EALTLFDVMKKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVD 428
Query: 212 TLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM--KGHG 267
LCK ++E A +F + C PN+ T+ I G K ++D+A ++M GH
Sbjct: 429 RLCKANQLEEAHRIFESASERGC-NPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHD 487
Query: 268 CHPCVISYSTIIQSY---CRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
+P + Y+++I+++ R+ + K+Y+ EM +G P++ T M + K+G+ E
Sbjct: 488 ANPII--YTSLIRNFFMHGRKEDGHKIYK---EMIRRGGRPDLTLLNTYMDCVFKAGEVE 542
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTM 384
+ I E MK G PD R ++ LI+ L +A + +E ++Q M + G A D +N +
Sbjct: 543 KGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQA-MSQQGFALDARAYNAV 601
Query: 385 ITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK 444
+ G +KA+ VLEEM K++H P V T+ ++ K + DE + +L +
Sbjct: 602 VDGLCKSGKVDKAYEVLEEM-KVKHVHPTVATYGSIVDGLAKIDRLDE--AYMLFEEAKS 658
Query: 445 HHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDA 504
+ L++ Y+ +I G + + + AYL+ +EM+ +TP T ++D + + D
Sbjct: 659 KGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDE 718
Query: 505 A 505
A
Sbjct: 719 A 719
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 106/418 (25%), Positives = 196/418 (46%), Gaps = 10/418 (2%)
Query: 62 PRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALG 119
P + ++II + + +E ++ ++ + + P+ VN ++ R + + A
Sbjct: 383 PNISTYNIIIDMLCMAGRVNEAYK-IRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHR 441
Query: 120 IFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRF 178
IF A S G +S Y ++D LGK ++D L E+M GH ++R F
Sbjct: 442 IFESA-SERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNF 500
Query: 179 SGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNA 237
G+ ED + + E+ G + +N +D + K G+VE R++F ++KS P+
Sbjct: 501 FMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDV 560
Query: 238 HTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDE 297
+++I IHG K + E Q M G +Y+ ++ C+ K YE+L+E
Sbjct: 561 RSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEE 620
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
M+ + P V TY +++ LAK +EA + E+ K G + + ++ LI G+ R
Sbjct: 621 MKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGR 680
Query: 358 VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTF 417
+ EA Y+ EM + G+ P+ T+N+++ ++A + M +++ C PN T+
Sbjct: 681 IDEA-YLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMK-CSPNTYTY 738
Query: 418 HPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFK 475
L+ + K ++ + + K L ++ TYT +I GL + AY LF+
Sbjct: 739 SILINGLCRVQKYNKAF--VFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFE 794
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 173/350 (49%), Gaps = 7/350 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +++ L + RQ ++ LL +M G+ V++ ++R + GQ E A+ DE+
Sbjct: 179 YTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVK 238
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVD 254
LE + N+ +D K G V++A F ELK+ + P+ ++ + CK R+
Sbjct: 239 GSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLG 298
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA+ +M+ PC +Y+T+I Y F Y+LL+ ++ +GC P+VV++ +++
Sbjct: 299 EAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSIL 358
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
+ L K +EA+ + + MK +KP+ +N +I L A RV EA Y + EM G+
Sbjct: 359 TCLGKKRKVDEALTLFDVMK-KDAKPNISTYNIIIDMLCMAGRVNEA-YKIRDEMELAGL 416
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
P+ + N M+ E+A + E ++ C PN T+ L+ K GK D+
Sbjct: 417 FPNLLSVNIMVDRLCKANQLEEAHRIFESASE-RGCNPNSVTYCSLIDGLGKKGKIDDAY 475
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
+L + M++ H + I YT +I + E + ++KEMI P
Sbjct: 476 -RLFEKMLDAGHDANPI-IYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRP 523
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 168/347 (48%), Gaps = 9/347 (2%)
Query: 28 SSENCSHIVSSSPIESYCSDGARLDHHQVL--CVDSPRLPDIDVIISKVH--VGSSEDEV 83
+ + + I+ +S I ++ G + D H++ + PD+ ++ + + + E E
Sbjct: 484 AGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEK 543
Query: 84 FQSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMV 141
+++ +D P + LIH + IF+ A S G+ + Y +V
Sbjct: 544 GRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQ-AMSQQGFALDARAYNAVV 602
Query: 142 DILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLE 200
D L K ++D+ +LEEM H+ T+ T ++ + + ++A F+E + G+E
Sbjct: 603 DGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIE 662
Query: 201 KNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWT 259
N + L+D K G+++ A + E+ K + PN +T+N + K +DEA
Sbjct: 663 LNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALIC 722
Query: 260 IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK 319
Q MK C P +YS +I CR ++K + EMQ QG PNVVTYTT++S LAK
Sbjct: 723 FQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAK 782
Query: 320 SGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
G+ +A + E+ K G PDS FN LI + A+R EA V++
Sbjct: 783 VGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFE 829
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 167/370 (45%), Gaps = 5/370 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVM-RRFSGAGQWEDAVRTFDELG 195
Y MV +L K ++ + L +M V M + A +++DA + + L
Sbjct: 284 YTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLR 343
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDE 255
G + + N +L L K+ KV+ A ++F +K PN T+NI I C RV+E
Sbjct: 344 ERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDAKPNISTYNIIIDMLCMAGRVNE 403
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
A EM+ G P ++S + ++ C+ + + + + +GC PN VTY +++
Sbjct: 404 AYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLID 463
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
L K G ++A R+ EKM G + + LI R ++ +Y+ EM G
Sbjct: 464 GLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYK-EMIRRGGR 522
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS 435
PD + NT + G EK + E+M P+V+++ L+ K G+ E S
Sbjct: 523 PDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFL-PDVRSYSILIHGLTKAGQARET-S 580
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE 495
+ M ++ +LD Y V+ GLC++ K + AY + +EM + P T I+D
Sbjct: 581 NIFQAM-SQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDG 639
Query: 496 VKQKHMYDAA 505
+ + D A
Sbjct: 640 LAKIDRLDEA 649
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 146/321 (45%), Gaps = 6/321 (1%)
Query: 189 RTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGW 247
+ +E+ G L+ TL + ++E A V ++ P + + I
Sbjct: 127 KVLEEMSHLGYGLPNPACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGAL 186
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
+ + + A +++M+ G V ++T++++ R+ L+DE++ P++
Sbjct: 187 AEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDI 246
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
V Y + K+G + A + ++K G +PD + +++ L +A R+ EA ++
Sbjct: 247 VLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQ 306
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKT 427
E V P +NTMI + + A+ +LE + + C P+V +F+ +L K
Sbjct: 307 MEAERDV-PCAYAYNTMIMGYGSAERFDDAYKLLERLRE-RGCIPSVVSFNSILTCLGKK 364
Query: 428 GKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
K DE L+ L D M K +I+TY ++I LC A + AY + EM + P
Sbjct: 365 RKVDEALT-LFDVM--KKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLL 421
Query: 488 TCRLILDEVKQKHMYDAAEKI 508
+ +++D + + + + A +I
Sbjct: 422 SVNIMVDRLCKANQLEEAHRI 442
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 119/234 (50%), Gaps = 4/234 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTI--AKVMRRFSGAGQWEDAVRTFDEL 194
Y +VD L K+ ++D+ L EE +K + LN I + ++ F G+ ++A +E+
Sbjct: 633 YGSIVDGLAKIDRLDEAYMLFEE-AKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEM 691
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRV 253
GL N T N L+D L K +++ A F +K PN +T++I I+G C++ +
Sbjct: 692 MKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKY 751
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
++A QEM+ G P V++Y+T+I + N + Y L + + G P+ ++ +
Sbjct: 752 NKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNAL 811
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
+ ++ + EA ++ E+ ++ G + + + L+ L + +++A V V
Sbjct: 812 IEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDALNKTECLEQAAIVGAV 865
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/419 (20%), Positives = 180/419 (42%), Gaps = 10/419 (2%)
Query: 92 VCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMD 151
+ +A P+H +V ++ K+ +A F A + + Y ++ L +
Sbjct: 67 LSSAPAPAHDVVVYVLRSLKNPSLAA-PFFLLASASSSQPLPPDAYNAVLPFLS--HDLA 123
Query: 152 QMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLL 210
+ +LEEMS G+ + A ++ + + EDA R + +L+
Sbjct: 124 ALEKVLEEMSHLGYGLPNPACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLI 183
Query: 211 DTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCH 269
L + + E A + +++ + F + + +++ A + E+KG
Sbjct: 184 GALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLE 243
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI 329
P ++ Y+ I + + + ++ E++A G P+ V+YT+++ L K+G EA +
Sbjct: 244 PDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEEL 303
Query: 330 TEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFS 389
+M+ P + +N +I G A R +A Y + E G P +FN+++T
Sbjct: 304 FGQMEAERDVPCAYAYNTMIMGYGSAERFDDA-YKLLERLRERGCIPSVVSFNSILTCLG 362
Query: 390 HHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSL 449
++A + + M K KPN+ T++ ++ G+ +E + D + L
Sbjct: 363 KKRKVDEALTLFDVMKK--DAKPNISTYNIIIDMLCMAGRVNEAYK--IRDEMELAGLFP 418
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
++ + +++ LC+AN+ E A+ +F+ P T ++D + +K D A ++
Sbjct: 419 NLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRL 477
>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
Length = 628
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/409 (27%), Positives = 188/409 (45%), Gaps = 27/409 (6%)
Query: 120 IFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRF 178
+F W G GY+HS Y +D L K ++M + G+ T + V+R
Sbjct: 24 LFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGL 83
Query: 179 SGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS---CIPP 235
AG+ + A +L G++ N T ++++D CK +V+ A +F + S C+P
Sbjct: 84 CKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVP- 142
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
+ TFN + G C R+ EA + M GC P VISYST++ C+ + L
Sbjct: 143 DVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLW 202
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFF---------- 345
+EM + C P++V YT+ ++ L K+ EA KM GSK D+ F
Sbjct: 203 EEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKK 262
Query: 346 -------NCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
N +I L R+ + EA ++ EM P FNT+I
Sbjct: 263 GHAEEAQNQMIEHLCRSGMLDEACKTFE-EMISRNHPPSAELFNTLIHAVCKSKRLPDGV 321
Query: 399 HVLEEMNKLE--HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTL 456
+ + M ++ +C PN++T++ ++ + K + DE +L+++M N + LS D+ TY+
Sbjct: 322 LLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEA-QELVNEMAN-YGLSPDVVTYSA 379
Query: 457 VIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
++ GLC+ K + A L +EM + P T IL+ + + D A
Sbjct: 380 LVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYA 428
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 146/301 (48%), Gaps = 11/301 (3%)
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC----IPPN 236
+G ++A +TF+E+ + + E N L+ +CK ++ +F +KS PPN
Sbjct: 279 SGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPN 338
Query: 237 AHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLD 296
T+NI + CK ++DEAQ + EM +G P V++YS ++ C+ + +LL+
Sbjct: 339 LETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLE 398
Query: 297 EMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRAS 356
EM +G P+ T ++++ L+K+G + A+ E MK GS PD +N L+ L +A
Sbjct: 399 EMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAG 458
Query: 357 RVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQT 416
R+ EA+ + +M PD ++ +IT G A + +EM K P+
Sbjct: 459 RIDEAI-TFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVK-RGVLPDTVL 516
Query: 417 FHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKE 476
+H LL + G D L L + D + +V+ GLC+A K E A + +
Sbjct: 517 YHSLLDGLARNGLEDLALELLKTSLCKP-----DFVMHKMVLDGLCKAGKAEDACEVVER 571
Query: 477 M 477
M
Sbjct: 572 M 572
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 109/456 (23%), Positives = 197/456 (43%), Gaps = 74/456 (16%)
Query: 112 DDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKG-----HIV 166
D K LG R +G + + Y +++D K ++D + + MS G +V
Sbjct: 90 DKAKELLGQLRESG----VKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVV 145
Query: 167 TLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF 226
T N++ ++ + +A F+ + G E N + + LLD LCK G+++ A ++
Sbjct: 146 TFNSL---LKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLW 202
Query: 227 LEL--KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII----- 279
E+ KSC+P + + F+ G CK NRV EA ++M G +++ST+I
Sbjct: 203 EEMVEKSCVP-DLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCK 261
Query: 280 ------------QSYCRQYNFSKVYELLDEMQAQG------------------------- 302
+ CR + + +EM ++
Sbjct: 262 KGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGV 321
Query: 303 -------------CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
CPPN+ TY ++ L K+ +EA + +M G PD ++ L+
Sbjct: 322 LLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALV 381
Query: 350 YTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH 409
L + ++ A + + EM + GV PD+ T +++ S G + A LE M K
Sbjct: 382 DGLCKLGKLDRACDLLE-EMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETM-KARG 439
Query: 410 CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEW 469
P++ T++ LL K G+ DE ++ L + K + D+ +YT++I LCR+ +
Sbjct: 440 STPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAK--CTPDVFSYTIIITALCRSGQAAG 497
Query: 470 AYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
A+ +F+EM+ + P +LD + + + D A
Sbjct: 498 AHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLA 533
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 148/348 (42%), Gaps = 56/348 (16%)
Query: 67 IDVIISKVHVGSSEDEVFQSLKQ----DHVCNAIQ--------PSHYLVNKLIHRFKDDW 114
I ++ K H +++++ + L + D C + PS L N LIH
Sbjct: 256 IGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSK 315
Query: 115 KSALGI--FRWAGS-----CPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIV 166
+ G+ F+ S CP + E Y +MVD L K +Q+D+ + L+ EM+ G
Sbjct: 316 RLPDGVLLFQRMKSMKEFYCP---PNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSP 372
Query: 167 TLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF 226
+ T + ++ G+ + A +E+ G+ ++ T +L+ L K GKV+ A S
Sbjct: 373 DVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHL 432
Query: 227 LELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQ 285
+K+ P+ T+N + G CK R+DEA + +M C P V SY+ II + CR
Sbjct: 433 ETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRS 492
Query: 286 YNFSKVYELLDEMQAQG--------------------------------CPPNVVTYTTV 313
+ + + EM +G C P+ V + V
Sbjct: 493 GQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCKPDFVMHKMV 552
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
+ L K+G E+A + E+M G D+ + ++ L + +V +A
Sbjct: 553 LDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKLGKVDKA 600
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 96/229 (41%), Gaps = 34/229 (14%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +VD L K+ ++D+ LLEEMSK G T A ++ S AG+ + A+ + +
Sbjct: 377 YSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMK 436
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVD 254
G + T N LLD LCK G+++ A + ++ + P+ ++ I I C+ +
Sbjct: 437 ARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAA 496
Query: 255 EAQWTIQEMKGHG--------------------------------CHPCVISYSTIIQSY 282
A QEM G C P + + ++
Sbjct: 497 GAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCKPDFVMHKMVLDGL 556
Query: 283 CRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
C+ E+++ M G P + TY +V+S L K G ++A ++ +
Sbjct: 557 CKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKLGKVDKARQLVD 605
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 125/463 (26%), Positives = 210/463 (45%), Gaps = 60/463 (12%)
Query: 98 PSHYLVNKLIHRFKDDWKS--ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRA 155
P+ +L + LI +S AL FR A G + IY ++ L K +++DQ A
Sbjct: 42 PNVFLCSILIDGLCKAKRSIDALRCFR-AMQGSGIVADTVIYTALLSGLWKEKRLDQALA 100
Query: 156 LLEEMS----KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLD 211
+L EM + ++VT N++ + + + + + A F+ + + + T N LLD
Sbjct: 101 ILHEMRDHGCEPNVVTYNSLIDGLCKNN---EPDRAQELFEHMKSVECSPSMVTYNTLLD 157
Query: 212 TLCKEGKVELARSVFLEL---------KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQE 262
L + GK+E A ++F E+ C PN T+++ I G CK NRV +A ++
Sbjct: 158 GLFRTGKLERAMALFQEMLDRRSHDMDDRC-SPNVITYSVLIDGLCKANRVSQAVELLES 216
Query: 263 MKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM------------------------ 298
MK GC P VI+Y+ ++ C++ + +E+L EM
Sbjct: 217 MKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARR 276
Query: 299 -----------QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNC 347
+GC PNVVTY T++ L K G ++A + M G PD +N
Sbjct: 277 VSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNM 336
Query: 348 LIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKL 407
LI L +A +V E++ + + + G+ PD T++++I ++A +L + K
Sbjct: 337 LINGLCKADQVDESIALLRRAV-SGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYV-KS 394
Query: 408 EHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKC 467
C P+V + L+ K GK DE L +++ D+ TY+ +I GLC+A +
Sbjct: 395 RGCPPDVILYSTLIDGLCKAGKVDEAFD--LYEVMAGDGCDADVVTYSTLIDGLCKAGRV 452
Query: 468 EWAYLLFKEMIGHDITPRYQTCR-LILDEVKQKHMYDAAEKIE 509
+ A+LL M+ P T LI H+ +A E +E
Sbjct: 453 DEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVE 495
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 180/379 (47%), Gaps = 15/379 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM--SKGHIV------TLNTIAKVMRRFSGAGQWEDAV 188
Y ++D L + ++++ AL +EM + H + + T + ++ A + AV
Sbjct: 152 YNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAV 211
Query: 189 RTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHG 246
+ + G + T +L+D LCKE KV A V E+ C+P N T+N +HG
Sbjct: 212 ELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVP-NLVTYNSLLHG 270
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C+ RV +A +++M GC P V++Y T+I C+ +L +M +G P+
Sbjct: 271 LCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPD 330
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
++ Y +++ L K+ +E+I + + G KPD ++ +IY L R++R+ EA +
Sbjct: 331 LMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLL- 389
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
+ + G PD ++T+I G ++AF + E M + C +V T+ L+ K
Sbjct: 390 LYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAG-DGCDADVVTYSTLIDGLCK 448
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
G+ DE + LL + + TY +I GLC N + A L +EM + P
Sbjct: 449 AGRVDE--AHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSA 506
Query: 487 QTCRLILDEVKQKHMYDAA 505
T +++ + + D+A
Sbjct: 507 VTYNILIHGMCRMERVDSA 525
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 168/362 (46%), Gaps = 47/362 (12%)
Query: 170 TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL 229
T A ++R F G+ + A R FDE+ + L N ++L+D LCK + A F +
Sbjct: 11 TYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRCFRAM 70
Query: 230 K-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
+ S I + + + G K R+D+A + EM+ HGC P V++Y+++I C+
Sbjct: 71 QGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEP 130
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS-------KPD 341
+ EL + M++ C P++VTY T++ L ++G E A+ + ++M S P+
Sbjct: 131 DRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPN 190
Query: 342 SRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVL 401
++ LI L +A+RV +AV + + M G +PD T+ ++ A+ VL
Sbjct: 191 VITYSVLIDGLCKANRVSQAVELLE-SMKARGCSPDVITYTILVDGLCKESKVAAAWEVL 249
Query: 402 EEM------------NKLEH----------------------CKPNVQTFHPLLKSCFKT 427
EM N L H C PNV T+ L+ K
Sbjct: 250 REMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKV 309
Query: 428 GKT-DECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
G+ D C +L DM++K + D+ Y ++I+GLC+A++ + + L + + I P
Sbjct: 310 GRVKDAC--AMLADMIDKGG-TPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDV 366
Query: 487 QT 488
T
Sbjct: 367 VT 368
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 171/364 (46%), Gaps = 36/364 (9%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ L + R++ AL+ +M+ +G + T ++ G+ +DA ++
Sbjct: 264 YNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMI 323
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVD 254
G + N+L++ LCK +V+ + ++ + I P+ T++ I+G C+ NR+D
Sbjct: 324 DKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLD 383
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA + +K GC P VI YST+I C+ + ++L + M GC +VVTY+T++
Sbjct: 384 EACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLI 443
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
L K+G +EA + +M +G+ P + +N LI L + + EA+ + + EM +
Sbjct: 444 DGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVE-EMERSNC 502
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
AP T+N +I HG M ++E V C G T
Sbjct: 503 APSAVTYNILI-----HG-----------MCRMERVDSAVVLLEQAKARCVAAGGT---- 542
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
+LD Y+ +I GLC+A + A F+EMI + + P + T ++L+
Sbjct: 543 -------------ALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLE 589
Query: 495 EVKQ 498
+K+
Sbjct: 590 GLKK 593
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 152/326 (46%), Gaps = 17/326 (5%)
Query: 200 EKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQW 258
+ + T LL C+ G+++ A+ F E++S + PN +I I G CK R +A
Sbjct: 6 QPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALR 65
Query: 259 TIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLA 318
+ M+G G + Y+ ++ ++ + +L EM+ GC PNVVTY +++ L
Sbjct: 66 CFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLC 125
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP------EN 372
K+ + + A + E MK V P +N L+ L R +++ A+ ++Q + ++
Sbjct: 126 KNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDD 185
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD- 431
+P+ T++ +I +A +LE M K C P+V T+ L+ K K
Sbjct: 186 RCSPNVITYSVLIDGLCKANRVSQAVELLESM-KARGCSPDVITYTILVDGLCKESKVAA 244
Query: 432 --ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTC 489
E L ++LD ++ TY ++HGLCRA + A L ++M TP T
Sbjct: 245 AWEVLREMLD-----AGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTY 299
Query: 490 RLILDEV-KQKHMYDAAEKIEAVMKK 514
++D + K + DA + ++ K
Sbjct: 300 GTLIDGLCKVGRVKDACAMLADMIDK 325
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 125/244 (51%), Gaps = 9/244 (3%)
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
C P V +Y+ +++ +CR + DEM+++ PNV + ++ L K+ +A+
Sbjct: 5 CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL 64
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITM 387
R M+ G D+ + L+ L + R+ +A+ + EM ++G P+ T+N++I
Sbjct: 65 RCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILH-EMRDHGCEPNVVTYNSLIDG 123
Query: 388 FSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHL 447
+ ++A + E M +E C P++ T++ LL F+TGK + ++ L +M+++
Sbjct: 124 LCKNNEPDRAQELFEHMKSVE-CSPSMVTYNTLLDGLFRTGKLERAMA-LFQEMLDRRSH 181
Query: 448 SLD------ITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHM 501
+D + TY+++I GLC+AN+ A L + M +P T +++D + ++
Sbjct: 182 DMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESK 241
Query: 502 YDAA 505
AA
Sbjct: 242 VAAA 245
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 143/307 (46%), Gaps = 12/307 (3%)
Query: 76 VGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHS 133
VG +D ++ D + P + N LI+ D ++ + R A S G +
Sbjct: 309 VGRVKDAC--AMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVS-GGIKPD 365
Query: 134 SEIYEMMVDILGKVRQMDQM-RALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++ L + ++D+ R LL S+G + + ++ AG+ ++A ++
Sbjct: 366 VVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYE 425
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKIN 251
+ G + + T + L+D LCK G+V+ A + + + PP+ T+N I G C +N
Sbjct: 426 VMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLN 485
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ-----GCPPN 306
+DEA ++EM+ C P ++Y+ +I CR LL++ +A+ G +
Sbjct: 486 HLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALD 545
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
+ Y++++ L K+G EA+ ++M G PD ++ L+ L ++ + E ++
Sbjct: 546 TIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVL 605
Query: 367 VEMPENG 373
+M + G
Sbjct: 606 DQMVQLG 612
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 134/301 (44%), Gaps = 20/301 (6%)
Query: 41 IESYCSDGARLDHHQVLC--VDSPRLPDI---DVIISKVHVGSSEDEVFQSLKQDHVCNA 95
I+ C G D +L +D PD+ +++I+ + DE L++ V
Sbjct: 303 IDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRR-AVSGG 361
Query: 96 IQPSHYLVNKLIHRF----KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMD 151
I+P + +I+ + D L ++ + CP +Y ++D L K ++D
Sbjct: 362 IKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCP---PDVILYSTLIDGLCKAGKVD 418
Query: 152 QMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLL 210
+ L E M+ G + T + ++ AG+ ++A + G +T T N L+
Sbjct: 419 EAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLI 478
Query: 211 DTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH--- 266
LC ++ A + E+ +S P+A T+NI IHG C++ RVD A +++ K
Sbjct: 479 KGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVA 538
Query: 267 --GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
G I+YS++I C+ ++ + EM G P+ +TY+ ++ L KS D
Sbjct: 539 AGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLH 598
Query: 325 E 325
E
Sbjct: 599 E 599
>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 901
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/360 (29%), Positives = 181/360 (50%), Gaps = 7/360 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ L V++ D M L +M + G+ V+++ V+R F+ G+ + A+ DE+
Sbjct: 201 YTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMK 260
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVD 254
+ L + N+ +D K GKV++A F E+KS + P+ T+ I CK NR+D
Sbjct: 261 SNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLD 320
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA ++M+ + PC +Y+T+I Y F + Y LL+ +A+GC P+V+ Y ++
Sbjct: 321 EAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCIL 380
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
+ L K G EA+R E+MK + P+ +N LI L +A V EA + + M E G+
Sbjct: 381 TCLGKKGRLGEALRTFEEMK-KDAAPNLSTYNVLIDMLCKAGEV-EAAFKVRDAMKEAGL 438
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
P+ T N MI ++A + E MN + C P+ TF L+ K G+ D+
Sbjct: 439 FPNVMTVNIMIDRLCKAKKLDEACSIFEGMNH-KICSPDEVTFCSLIDGLGKQGRVDDAY 497
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
+L + M++ + + YT +I + + E + +FKEMI +P + +D
Sbjct: 498 -RLYEQMLDSDKIP-NAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMD 555
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 117/430 (27%), Positives = 204/430 (47%), Gaps = 19/430 (4%)
Query: 82 EVFQSLKQDHVCNAIQPSHYLVNKLIHRFK-----DDWKSALGIFRWAGSCPGYEHSSEI 136
E+F+ ++Q N P Y N +I + D+ S L + G P S
Sbjct: 324 EIFEQMEQ----NRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIP----SVIA 375
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGT 196
Y ++ LGK ++ + EEM K L+T ++ AG+ E A + D +
Sbjct: 376 YNCILTCLGKKGRLGEALRTFEEMKKDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKE 435
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCI-PPNAHTFNIFIHGWCKINRVDE 255
GL N T+N+++D LCK K++ A S+F + I P+ TF I G K RVD+
Sbjct: 436 AGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDD 495
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
A ++M P + Y+++I+S+ + +++ EM +GC P++ M
Sbjct: 496 AYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMD 555
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
+ K+G+ + + E++K G PD ++ LI+ L +A +E ++ M E G
Sbjct: 556 CVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYA-MKEQGCV 614
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS 435
DT +NT I F G KA+ +LEEM K + +P V T+ ++ K + DE +
Sbjct: 615 LDTHAYNTFIDGFCKSGKVNKAYQLLEEM-KTKGRQPTVVTYGSVIDGLAKIDRLDE--A 671
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE 495
+L + + L L++ Y+ +I G + + + AYL+ +E++ +TP T +LD
Sbjct: 672 YMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDA 731
Query: 496 -VKQKHMYDA 504
VK + + +A
Sbjct: 732 LVKAEEINEA 741
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 103/413 (24%), Positives = 181/413 (43%), Gaps = 41/413 (9%)
Query: 140 MVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
++D LGK ++D L E+M I +++ F G+ ED + F E+ G
Sbjct: 483 LIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRG 542
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLELKS--CIPP--------------------- 235
+ +N +D + K G+ R++F E+KS IP
Sbjct: 543 CSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETY 602
Query: 236 -------------NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSY 282
+ H +N FI G+CK +V++A ++EMK G P V++Y ++I
Sbjct: 603 ELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGL 662
Query: 283 CRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDS 342
+ + Y L +E ++ G NVV Y++++ K G +EA I E++ G P+
Sbjct: 663 AKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNV 722
Query: 343 RFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLE 402
+NCL+ L +A + EA+ +Q M P+ T++ +I KAF +
Sbjct: 723 YTWNCLLDALVKAEEINEALVCFQ-NMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQ 781
Query: 403 EMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC 462
EM K + KPN T+ ++ K G E S L + + D +Y +I GL
Sbjct: 782 EMQK-QGLKPNTITYTTMIAGLAKAGNIAEASS--LFERFKANGGVPDSASYNAIIEGLS 838
Query: 463 RANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
+ + AY +F+E +TC +LD +++ + A + AV++++
Sbjct: 839 YSRRAMEAYKIFEETRMKGCNIHTKTCIALLDALQKDECLEQAAIVGAVLREI 891
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 109/424 (25%), Positives = 189/424 (44%), Gaps = 43/424 (10%)
Query: 98 PSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALL 157
P LV ++ R KD A+ FRW E Y+ ++ ++ K + D +L
Sbjct: 93 PKTDLVIGVLRRAKD-VNQAISYFRWTERKTDQALCPEAYDSLLLVMAKNVKFDYFEQIL 151
Query: 158 EEMS-KGHIVTLNT-------------------IAKVMRRFS---------------GAG 182
EMS G + T + + MR+F +
Sbjct: 152 GEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSV 211
Query: 183 QWEDAVRT-FDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTF 240
Q D + T F ++ G E + ++ +EG+++ A S+ E+KS C+ + +
Sbjct: 212 QESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLY 271
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
N+ I + K +VD A E+K HG P ++Y+++I C+ + E+ ++M+
Sbjct: 272 NVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQ 331
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
P Y T++ +G F+EA + E+ K G P +NC++ LG+ R+ E
Sbjct: 332 NRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGE 391
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
A+ ++ EM ++ AP+ ST+N +I M G E AF V + M K PNV T + +
Sbjct: 392 ALRTFE-EMKKD-AAPNLSTYNVLIDMLCKAGEVEAAFKVRDAM-KEAGLFPNVMTVNIM 448
Query: 421 LKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH 480
+ K K DE S + + +N S D T+ +I GL + + + AY L+++M+
Sbjct: 449 IDRLCKAKKLDEACS--IFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDS 506
Query: 481 DITP 484
D P
Sbjct: 507 DKIP 510
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 159/343 (46%), Gaps = 15/343 (4%)
Query: 35 IVSSSPIESYCSDGARLDHHQVL-------CVDSPRLPD--IDVIISKVHVGSSEDEVFQ 85
+V +S I+S+ G + D H++ C RL + +D + G +F+
Sbjct: 513 VVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGR-ALFE 571
Query: 86 SLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILG 145
+K + L++ L+ K + +A G + Y +D
Sbjct: 572 EIKSRGFIPDVMSYSILIHGLV---KAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFC 628
Query: 146 KVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTE 204
K ++++ LLEEM +KG T+ T V+ + + ++A F+E + GLE N
Sbjct: 629 KSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVV 688
Query: 205 TMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
+ L+D K G+++ A + EL + + PN +T+N + K ++EA Q M
Sbjct: 689 IYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNM 748
Query: 264 KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF 323
K P I+YS +I CR F+K + EMQ QG PN +TYTT+++ LAK+G+
Sbjct: 749 KNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNI 808
Query: 324 EEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
EA + E+ K G PDS +N +I L + R EA +++
Sbjct: 809 AEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFE 851
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 156/370 (42%), Gaps = 5/370 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVM-RRFSGAGQWEDAVRTFDELG 195
Y M+ +L K ++D+ + E+M + V M + AG++++A +
Sbjct: 306 YTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQK 365
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDE 255
G + N +L L K+G++ A F E+K PN T+N+ I CK V+
Sbjct: 366 ARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDAAPNLSTYNVLIDMLCKAGEVEA 425
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
A MK G P V++ + +I C+ + + + M + C P+ VT+ +++
Sbjct: 426 AFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLID 485
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
L K G ++A R+ E+M P++ + LI + + R ++ +++ EM G +
Sbjct: 486 GLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFK-EMIHRGCS 544
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS 435
PD N + G K + EE+ K P+V ++ L+ K G E
Sbjct: 545 PDLRLLNAYMDCVFKAGETGKGRALFEEI-KSRGFIPDVMSYSILIHGLVKAGFARETYE 603
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE 495
+ + LD Y I G C++ K AY L +EM P T ++D
Sbjct: 604 LFY--AMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDG 661
Query: 496 VKQKHMYDAA 505
+ + D A
Sbjct: 662 LAKIDRLDEA 671
>gi|224068054|ref|XP_002302657.1| predicted protein [Populus trichocarpa]
gi|222844383|gb|EEE81930.1| predicted protein [Populus trichocarpa]
Length = 602
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 185/388 (47%), Gaps = 6/388 (1%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS 161
L ++++R D A F WA P Y H E Y+ M+ +L K++Q + ALLEEM
Sbjct: 83 LTERVLNRCGDAGILAYKFFVWASKQPCYRHCYENYKAMIKVLSKMKQFGAVWALLEEMR 142
Query: 162 KGH--IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV 219
+ + ++T VMRRF+ + A+ DE+ +G E + LLD LCK G V
Sbjct: 143 RDNSVLITSEVFVVVMRRFASSRMVNKAIEVLDEMPKYGCEPDEYVFGCLLDALCKNGSV 202
Query: 220 ELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
+ A S+F +++ P+ F ++GWCK ++ EA+ + +M+ G P ++ Y+ ++
Sbjct: 203 KEAASLFEDMRVRFSPSLKHFTCLLYGWCKEGKLLEAKHVLVQMREAGFEPDIVVYNNLL 262
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
Y ++LL E++ +GC PN +YT ++ L +EA+R+ +M+ G
Sbjct: 263 SGYATAGKMGDAFDLLKEIRRKGCDPNATSYTILIQALCGQEKMDEAMRVFVEMERSGCD 322
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
D + L+ + + + + Q M + G P+ T+ ++ E+
Sbjct: 323 ADVVTYTALVSGFCKWRMIDKGYQILQ-SMIQKGHMPNQLTYLHLMLAHEKKEELEECKE 381
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIH 459
++ EM K+ C P++ ++ +++ K G+ + + + V+ LS + T+ ++I+
Sbjct: 382 LMGEMQKI-GCIPDLSIYNVVIRLACKLGEVNAGVDAWNEMEVS--GLSPGLDTFVIMIN 438
Query: 460 GLCRANKCEWAYLLFKEMIGHDITPRYQ 487
G A FKEM+ + Q
Sbjct: 439 GFLGHGYLVEACQYFKEMVERGLLSSRQ 466
>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
Length = 331
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/309 (31%), Positives = 158/309 (51%), Gaps = 5/309 (1%)
Query: 170 TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL 229
T ++ R + +DA+ T +E+ T G++ + N +L LC+E KVE AR +F ++
Sbjct: 11 TYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKM 70
Query: 230 -KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
K I PN T+N I+G CK R++ A +EM G G P +SY+T+I +C++ +
Sbjct: 71 VKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDL 130
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
++ D+M C PNVVTYTT++ L+KSG + A + + M G P+ ++CL
Sbjct: 131 VAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCL 190
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
I + RV EA + + +M G+AP T+N ++ E AF + M +
Sbjct: 191 IDGFCKVRRVDEAHKLLE-QMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQ-R 248
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
C P V T++ LL++ + D +L +M+ K D TY + GL RA K
Sbjct: 249 RCHPTVVTYNTLLRALCHHKQLDGA-HRLYAEMIAK-GCPPDAITYDTLAWGLTRAGKVH 306
Query: 469 WAYLLFKEM 477
A L ++M
Sbjct: 307 EAQELMEKM 315
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 134/279 (48%), Gaps = 4/279 (1%)
Query: 234 PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
PP+A T+ + CK R+D+A T++EM G P Y+ ++ C++ +
Sbjct: 6 PPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARL 65
Query: 294 LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLG 353
L ++M Q PNVVTY T+++ L K+ E A + ++M G P +N LI
Sbjct: 66 LFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFC 125
Query: 354 RASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPN 413
+ + A V+ +M + P+ T+ T+I S G + A VL+ M K + PN
Sbjct: 126 KKKDLVAAKDVFD-KMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVK-KGVTPN 183
Query: 414 VQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLL 473
V T+ L+ K + DE +LL+ MV ++ + TY ++++ LCRA+K E A+ L
Sbjct: 184 VATYSCLIDGFCKVRRVDEA-HKLLEQMVT-QGIAPTVVTYNILLNSLCRADKLEDAFKL 241
Query: 474 FKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
F+ M P T +L + D A ++ A M
Sbjct: 242 FRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEM 280
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 126/253 (49%), Gaps = 7/253 (2%)
Query: 96 IQPSHYLVNKLIHRFKDDWK--SALGIFR-WAGSCPGYEHSSEIYEMMVDILGKVRQMDQ 152
I P+ N LI+ W+ +A +F+ AG GY + Y ++D K + +
Sbjct: 75 INPNVVTYNTLINGLCKAWRIETAYELFKEMAGK--GYVPTEVSYNTLIDGFCKKKDLVA 132
Query: 153 MRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLD 211
+ + ++M + + V + T ++ S +G+ + A D + G+ N T + L+D
Sbjct: 133 AKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLID 192
Query: 212 TLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHP 270
CK +V+ A + ++ + I P T+NI ++ C+ +++++A + M CHP
Sbjct: 193 GFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHP 252
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRIT 330
V++Y+T++++ C + L EM A+GCPP+ +TY T+ L ++G EA +
Sbjct: 253 TVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELM 312
Query: 331 EKMKIVGSKPDSR 343
EKMK+ P R
Sbjct: 313 EKMKLTKRNPFGR 325
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 111/231 (48%), Gaps = 37/231 (16%)
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
A+ PP+ +TY ++ L K+ ++A+ E+M G KPD+ +N ++ L + +V+
Sbjct: 2 ARYAPPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVE 61
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM------------NKL 407
EA +++ +M + + P+ T+NT+I E A+ + +EM N L
Sbjct: 62 EARLLFE-KMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTL 120
Query: 408 ----------------------EHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKH 445
+C PNV T+ L+ K+GK + +++LD MV K
Sbjct: 121 IDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKV-QAAAEVLDGMVKK- 178
Query: 446 HLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV 496
++ ++ TY+ +I G C+ + + A+ L ++M+ I P T ++L+ +
Sbjct: 179 GVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSL 229
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/414 (27%), Positives = 200/414 (48%), Gaps = 19/414 (4%)
Query: 82 EVFQSLKQDHVCNAIQPSHYLVNKLIHRF-----KDDWKSALGIFRWAGSCPGYEHSSEI 136
++FQ L + + PS LIH DD + G CP S
Sbjct: 31 DLFQKLLH----SGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRG-CP---PSPVT 82
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +++D K +++ L+++M GH+ + T VM +G+ E+A+ F+E+
Sbjct: 83 YNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEME 142
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVD 254
G N + N ++ LC++ K++ A VF E+++ IPP++ ++ I I G K +++
Sbjct: 143 RLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLN 202
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA + M G P ++Y+ +I C Y + EL M+++GC P+ T+ ++
Sbjct: 203 EAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILI 262
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
K G +EA R+ ++M G PD ++ LI L +RV +A ++ + +M +
Sbjct: 263 DAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLE-DMVKRQC 321
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
P T NT+I G ++A VL+ M P+V T++ L+ + G+T+
Sbjct: 322 KPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQ-SPDVVTYNTLVHGHCRAGQTERA- 379
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+LL DMV + L+ ++ TYT ++ GLC+AN+ A +F +M P T
Sbjct: 380 RELLSDMVAR-GLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFT 432
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 184/390 (47%), Gaps = 43/390 (11%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIA--KVMRRFSGAGQWEDAVRTFDEL 194
Y +++D L K +++ R L +++ VT +T+A ++ A ++DA F ++
Sbjct: 13 YGILIDGLAKAGKLNDARDLFQKLLHSG-VTPSTVAYTSLIHGLCMANSFDDARELFADM 71
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRV 253
G + T N+++D CK G +E A + ++ + P+ T+N + G CK RV
Sbjct: 72 NRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRV 131
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
+EA EM+ GC P S++TII C+Q + ++ EM+A+ PP+ +Y +
Sbjct: 132 EEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGIL 191
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFN------CLIYTLGRA------------ 355
+ LAK+G EA ++ +M G P + +N CL YTL A
Sbjct: 192 IDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGC 251
Query: 356 -----------------SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
++ EA + + M ++G PD T++T+I+ + A
Sbjct: 252 RPSRFTFNILIDAHCKRGKMDEAFRLLK-RMTDDGHVPDVVTYSTLISGLCSIARVDDAR 310
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
H+LE+M K CKP V T + L+ K G+ E ++LD MV+ S D+ TY ++
Sbjct: 311 HLLEDMVK-RQCKPTVVTQNTLIHGLCKAGRIKEA-REVLDAMVSSGQ-SPDVVTYNTLV 367
Query: 459 HGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
HG CRA + E A L +M+ + P T
Sbjct: 368 HGHCRAGQTERARELLSDMVARGLAPNVVT 397
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 163/342 (47%), Gaps = 39/342 (11%)
Query: 207 NLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKG 265
+L+D L K GK+ AR +F +L S + P+ + IHG C N D+A+ +M
Sbjct: 14 GILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNR 73
Query: 266 HGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEE 325
GC P ++Y+ II + C++ + +L+ +M G P+VVTY TVM L KSG EE
Sbjct: 74 RGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEE 133
Query: 326 AIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMI 385
A+ + +M+ +G P+ R N +I L + S++ +A V+ EM + PD+ ++ +I
Sbjct: 134 ALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFH-EMEARDIPPDSWSYGILI 192
Query: 386 TMFSHHGHHEKAFHVLEEM------------NKLEH----------------------CK 411
+ G +A+ + M N + H C+
Sbjct: 193 DGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCR 252
Query: 412 PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAY 471
P+ TF+ L+ + K GK DE +LL M + H+ D+ TY+ +I GLC + + A
Sbjct: 253 PSRFTFNILIDAHCKRGKMDEAF-RLLKRMTDDGHVP-DVVTYSTLISGLCSIARVDDAR 310
Query: 472 LLFKEMIGHDITPRYQTCR-LILDEVKQKHMYDAAEKIEAVM 512
L ++M+ P T LI K + +A E ++A++
Sbjct: 311 HLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMV 352
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 136/276 (49%), Gaps = 4/276 (1%)
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
+ P++ ++ I I G K ++++A+ Q++ G P ++Y+++I C +F
Sbjct: 6 VSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAR 65
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
EL +M +GCPP+ VTY ++ K G EEA + +KM G PD +N ++ L
Sbjct: 66 ELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGL 125
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
++ RV+EA+ ++ EM G P+ + NT+I ++A V EM + P
Sbjct: 126 CKSGRVEEALLLFN-EMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEM-EARDIPP 183
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
+ ++ L+ K GK +E +L M++ ++ TY +VIHG+C A + A
Sbjct: 184 DSWSYGILIDGLAKAGKLNEAY-KLFRRMLDS-GITPSAVTYNVVIHGMCLAYTLDEALE 241
Query: 473 LFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
LFK M P T +++D ++ D A ++
Sbjct: 242 LFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRL 277
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 158/353 (44%), Gaps = 6/353 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G S+ Y +++ + +D+ L + M SKG + T ++ G+ ++A
Sbjct: 215 GITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEA 274
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHG 246
R + G + T + L+ LC +V+ AR + ++ K P T N IHG
Sbjct: 275 FRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHG 334
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
CK R+ EA+ + M G P V++Y+T++ +CR + ELL +M A+G PN
Sbjct: 335 LCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPN 394
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
VVTYT ++S L K+ EA + +MK G P+ + LI A +V + ++
Sbjct: 395 VVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFG 454
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNK-LEHCKPNVQTFHPLLKSCF 425
EM G++PD + T+ G +A +L E + L + + +
Sbjct: 455 -EMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLL 513
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
GK + L + DMV L +LV GLC++ + A + +E++
Sbjct: 514 DAGKMEMALG-FVRDMVRGGQLPAPERCASLV-AGLCKSGQGGEARAVLEEIM 564
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 191/399 (47%), Gaps = 7/399 (1%)
Query: 118 LGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMR 176
+ F+WAGS Y H + Y ++++L K + D + +M + G + T ++R
Sbjct: 1 MAFFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLR 60
Query: 177 RFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPP 235
A ++E+A F + G N + ++L+ LC+ KV+ A + E+ P
Sbjct: 61 SLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQP 120
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
N T+ + G CK+ ++ EA M GC P + Y+ +I + ++ + + Y L
Sbjct: 121 NVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLF 180
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
+EM +GC P V TY +++S ++ G+F + + M G P+ FN L+ +
Sbjct: 181 EEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKM 240
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQ 415
+ EA ++ +EM G PD ++NT+I G +A +L EM + P++
Sbjct: 241 GDMVEAHRLF-LEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIR-SGVGPDIV 298
Query: 416 TFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFK 475
+++ L+ K+G D + + + K L D +Y+ +I LCRA K A+++FK
Sbjct: 299 SYNILIDGYSKSGALDHAIKLFYE--IPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFK 356
Query: 476 EMIGHDITPRYQTC-RLILDEVKQKHMYDAAEKIEAVMK 513
+MI + P L++ + + + ++ E +A++K
Sbjct: 357 DMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVK 395
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 198/424 (46%), Gaps = 13/424 (3%)
Query: 89 QDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGK 146
D + P+ Y L+ ++ A +FR + G + Y +++ L +
Sbjct: 41 NDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAA-QGCSPNVFSYSILIAGLCR 99
Query: 147 VRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTET 205
+++D+ LL EM GH + T ++ G+ ++AV F + G +
Sbjct: 100 GQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVV 159
Query: 206 MNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
N+L+D K+G + A +F E+ K CIP T+N + G+ + Q ++M
Sbjct: 160 YNVLIDGFSKKGDMGEAYRLFEEMLEKGCIP-TVFTYNSLLSGFSRKGEFGRVQSLFKDM 218
Query: 264 KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF 323
GC P + +++ ++ +C+ + + + L EM++ GCPP+VV+Y T++ + G
Sbjct: 219 LRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKP 278
Query: 324 EEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNT 383
EA R+ +M G PD +N LI ++ + A+ ++ E+P++G+ PD +++T
Sbjct: 279 HEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLF-YEIPKSGLEPDAFSYST 337
Query: 384 MITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS-CFKTGKTDECLSQLLDDMV 442
+I G AF V ++M P+ PL+ C T+ C +L MV
Sbjct: 338 IIDCLCRAGKVGAAFVVFKDMIA-NGSAPDAAVVIPLVIGLCRGERLTESC--ELFQAMV 394
Query: 443 NKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMY 502
+ L I Y L+++ LC+A + + +F E+ +P + ++IL+ +++
Sbjct: 395 KFECVPL-IPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSDDK 453
Query: 503 DAAE 506
DAAE
Sbjct: 454 DAAE 457
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 109/251 (43%), Gaps = 15/251 (5%)
Query: 85 QSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIF---RWAGSCPGYEHSSEIYEM 139
QSL +D + P+ + N L+ F D A +F R G P + +
Sbjct: 212 QSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRG 271
Query: 140 MVDILGKVRQMDQMRALLEEMSKG---HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGT 196
M K + + R L E + G IV+ N + + +S +G + A++ F E+
Sbjct: 272 MCS---KGKPHEAQRLLREMIRSGVGPDIVSYNIL---IDGYSKSGALDHAIKLFYEIPK 325
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDE 255
GLE + + + ++D LC+ GKV A VF ++ + P+A + G C+ R+ E
Sbjct: 326 SGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTE 385
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
+ Q M C P + Y+ ++ C+ V E+ E+ +G P+V ++
Sbjct: 386 SCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILE 445
Query: 316 YLAKSGDFEEA 326
L +S D + A
Sbjct: 446 TLRRSDDKDAA 456
>gi|15217608|ref|NP_171708.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806399|sp|O81908.2|PPR2_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g02060, chloroplastic; Flags: Precursor
gi|332189251|gb|AEE27372.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 117/434 (26%), Positives = 195/434 (44%), Gaps = 66/434 (15%)
Query: 117 ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALL---EEMSKGHIVTLNT-IA 172
L F W S G+ H + + +M++ LG+ R ++ R L E S G + +
Sbjct: 84 GLRFFDWV-SNKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFN 142
Query: 173 KVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC 232
++R + AG ++++V+ F + G+ + T N LL L K G+ +A +F E++
Sbjct: 143 SLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRT 202
Query: 233 --IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSK 290
+ P+++TFN I+G+CK + VDEA ++M+ + C+P V++Y+TII CR
Sbjct: 203 YGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKI 262
Query: 291 VYELLDEM--QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
+ +L M +A PNVV+YTT++ + +EA+ + M G KP++ +N L
Sbjct: 263 AHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTL 322
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGV----APDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
I L A R E + + + N APD TFN +I GH + A V +EM
Sbjct: 323 IKGLSEAHRYDE---IKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEM 379
Query: 405 --------------------------------NKL---------EHCKPNVQTFHPLLKS 423
N+L + CKP ++P+ +
Sbjct: 380 LNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEY 439
Query: 424 CFKTGKT---DECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH 480
GKT ++ QL+ V D +Y +I G CR K + AY L M+
Sbjct: 440 LCANGKTKQAEKVFRQLMKRGVQ------DPPSYKTLITGHCREGKFKPAYELLVLMLRR 493
Query: 481 DITPRYQTCRLILD 494
+ P +T L++D
Sbjct: 494 EFVPDLETYELLID 507
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 130/317 (41%), Gaps = 38/317 (11%)
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--------KSC 232
AG + A++ F E+ L ++ + ++L+ TLC + + A ++F EL K
Sbjct: 366 AGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDE 425
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
P A +N C + +A+ +++ G SY T+I +CR+ F Y
Sbjct: 426 CKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPP-SYKTLITGHCREGKFKPAY 484
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
ELL M + P++ TY ++ L K G+ A ++M P + F+ ++ L
Sbjct: 485 ELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAEL 544
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
+ E+ + + M E + + ++ + EKAF ++
Sbjct: 545 AKRKFANESFCLVTL-MLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVR---------- 593
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDD--MVNKHHLSL---------DITTYTLVIHGL 461
LL K +E L L ++ +++ H L L DI T VI GL
Sbjct: 594 -------LLYDNGYLVKMEELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGL 646
Query: 462 CRANKCEWAYLLFKEMI 478
C+ + A+ L+ E++
Sbjct: 647 CKHKRHSEAFSLYNELV 663
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 96/229 (41%), Gaps = 10/229 (4%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTF 240
G+ + A + F +L G++ + + L+ C+EGK + A + L L+ P+ T+
Sbjct: 444 GKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETY 502
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
+ I G KI A T+Q M P ++ +++ ++ ++ + L+ M
Sbjct: 503 ELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLE 562
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
+ N+ T V+ L S E+A I + D+ + + LG ++
Sbjct: 563 KRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLY------DNGYLVKMEELLGYLCENRK 616
Query: 361 AVYVYQVEM--PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKL 407
+ + + + E D T NT+I H H +AF + E+ +L
Sbjct: 617 LLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVEL 665
>gi|297743427|emb|CBI36294.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 167/326 (51%), Gaps = 9/326 (2%)
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCI 233
+ R + A DA+R F ++G FG++ ++ LL LCK V+ A+ F ++ +
Sbjct: 129 IFRAYCRANLPGDAIRAFHQMGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFFDKVNVEV 188
Query: 234 PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
PNA T++I + GW + EA+ +EM+ GC V++Y++++++ C+ N + Y+
Sbjct: 189 MPNAKTYSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDEAYK 248
Query: 294 LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLG 353
L EM + G P+ +Y+ + + D A ++ ++M+ P+ +NC++ L
Sbjct: 249 LFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCIVKKLC 308
Query: 354 RASRVQEAVYVYQV--EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCK 411
++ +V EA YQ+ EM E GV+PD ++N + H KA ++ M K E+C
Sbjct: 309 KSEKVDEA---YQLLDEMIERGVSPDLWSYNAIQAFHCDHCEVNKALRLISRMEK-ENCM 364
Query: 412 PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC-RANKCEWA 470
P+ T++ +LK + G+ D ++ + M + +TY +++HG C + K E A
Sbjct: 365 PDRHTYNMVLKMLLRVGRFDR-VTDVWGGMEERGFYPA-ASTYAVMVHGFCKKKGKLEEA 422
Query: 471 YLLFKEMIGHDITPRYQTCRLILDEV 496
F+ MI I P T L+ + V
Sbjct: 423 CKYFEMMIDDGIPPYSCTVELLRNRV 448
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 132/269 (49%), Gaps = 3/269 (1%)
Query: 138 EMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTF 197
+ ++ +L K + + Q + ++++ + T + +MR + G +A + F+E+
Sbjct: 162 DQLLYVLCKRKHVKQAQEFFDKVNVEVMPNAKTYSILMRGWGDVGDSSEARKLFEEMRER 221
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEA 256
G + N LL+ LCK G V+ A +F E+ S + P+A +++IFI +C++N + A
Sbjct: 222 GCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSA 281
Query: 257 QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSY 316
+ M+ + P V +Y+ I++ C+ + Y+LLDEM +G P++ +Y + ++
Sbjct: 282 FQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAIQAF 341
Query: 317 LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
+ +A+R+ +M+ PD +N ++ L R R V+ M E G P
Sbjct: 342 HCDHCEVNKALRLISRMEKENCMPDRHTYNMVLKMLLRVGRFDRVTDVWG-GMEERGFYP 400
Query: 377 DTSTFNTMITMF-SHHGHHEKAFHVLEEM 404
ST+ M+ F G E+A E M
Sbjct: 401 AASTYAVMVHGFCKKKGKLEEACKYFEMM 429
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 124/275 (45%), Gaps = 5/275 (1%)
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
F + +C+ N +A +M G V ++ C++ + + E D++
Sbjct: 126 FWLIFRAYCRANLPGDAIRAFHQMGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFFDKVN 185
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
+ PN TY+ +M GD EA ++ E+M+ G D +N L+ L + V
Sbjct: 186 VE-VMPNAKTYSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVD 244
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
EA +++ EM NG+APD +++ I + AF VL+ M + + PNV T++
Sbjct: 245 EAYKLFR-EMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRRY-NLVPNVFTYNC 302
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
++K K+ K DE QLLD+M+ + +S D+ +Y + C + A L M
Sbjct: 303 IVKKLCKSEKVDEAY-QLLDEMIER-GVSPDLWSYNAIQAFHCDHCEVNKALRLISRMEK 360
Query: 480 HDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
+ P T ++L + + +D + M++
Sbjct: 361 ENCMPDRHTYNMVLKMLLRVGRFDRVTDVWGGMEE 395
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 126/281 (44%), Gaps = 4/281 (1%)
Query: 133 SSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTF 191
+++ Y +++ G V + R L EEM +G V + ++ G ++A + F
Sbjct: 191 NAKTYSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDEAYKLF 250
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKI 250
E+G+ GL + + ++ + C+ + A V ++ + PN T+N + CK
Sbjct: 251 REMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCIVKKLCKS 310
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
+VDEA + EM G P + SY+ I +C +K L+ M+ + C P+ TY
Sbjct: 311 EKVDEAYQLLDEMIERGVSPDLWSYNAIQAFHCDHCEVNKALRLISRMEKENCMPDRHTY 370
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL-GRASRVQEAVYVYQVEM 369
V+ L + G F+ + M+ G P + + +++ + +++EA +++ M
Sbjct: 371 NMVLKMLLRVGRFDRVTDVWGGMEERGFYPAASTYAVMVHGFCKKKGKLEEACKYFEM-M 429
Query: 370 PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHC 410
++G+ P + T + G E+ + +M + C
Sbjct: 430 IDDGIPPYSCTVELLRNRVIGLGFSEQIDVLAGKMERSTSC 470
>gi|147793827|emb|CAN62355.1| hypothetical protein VITISV_022418 [Vitis vinifera]
Length = 546
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 113/424 (26%), Positives = 195/424 (45%), Gaps = 15/424 (3%)
Query: 73 KVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSC---PG 129
K + SS E+ +L H C + + LV ++ R + DW+ A F WA C G
Sbjct: 95 KTYRDSSVSEIEGAL---HQCR-LSLTDDLVLDVLKRHRSDWRPAYVFFNWASRCGXESG 150
Query: 130 YEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGH-IVTLNTIAKVMRRFSGAGQWEDAV 188
Y ++ ++DILG++R+ +M L +EMSK + T ++ R++ A + E+AV
Sbjct: 151 YSPGCGVHNEILDILGRMRRFHEMTQLFDEMSKRKGLXNERTFGVLLNRYAAAHKTEEAV 210
Query: 189 RTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWC 248
+ F + G E + LL +LC+ VE+A +F K+ PP+ + N+ ++GWC
Sbjct: 211 KIFYKRKGLGFELDLIAFQTLLMSLCRYKHVEMAEFLFHSKKNEFPPDIKSMNVILNGWC 270
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
+ + EA+ ++ C P +Y I S + S +L M +GC P+V
Sbjct: 271 VLGSLREAKRFWNDIITSKCKPDKFTYGIFINSLTKAGKLSTAVKLFQAMWEKGCNPDVA 330
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
++ L EA+ + +M +PD +N LI L + R E VY +
Sbjct: 331 ICNCIIDALCFKKRIPEALEVLREMNERDCQPDVATYNSLIKHLCKIQRF-EKVYELLDD 389
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M + G P+ T+ ++ E+ +LE M + C+ N ++ +LK G
Sbjct: 390 MEQKGCLPNARTYGYLL---KSTKKPEEVPGILERMER-NGCRMNSDCYNLILKLYMDWG 445
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ S L D + ++ + D TYT++IHGL + + A FK+M + P +T
Sbjct: 446 YELKLRSTL--DEMERNGMGPDQRTYTIMIHGLYDKGRMDDALSYFKQMTLMGMVPEPRT 503
Query: 489 CRLI 492
L+
Sbjct: 504 TLLV 507
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 116/293 (39%), Gaps = 41/293 (13%)
Query: 207 NLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKG 265
N +LD L + + +F E+ K N TF + ++ + ++ +EA + KG
Sbjct: 159 NEILDILGRMRRFHEMTQLFDEMSKRKGLXNERTFGVLLNRYAAAHKTEEAVKIFYKRKG 218
Query: 266 HGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEE 325
G +I++ T++ S CR Y ++ E L + PP++ + +++ G E
Sbjct: 219 LGFELDLIAFQTLLMSLCR-YKHVEMAEFLFHSKKNEFPPDIKSMNVILNGWCVLGSLRE 277
Query: 326 AIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMI 385
A R + KPD + I +L +A ++ AV ++Q M E G PD + N +I
Sbjct: 278 AKRFWNDIITSKCKPDKFTYGIFINSLTKAGKLSTAVKLFQA-MWEKGCNPDVAICNCII 336
Query: 386 TMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKH 445
+A VL EMN+ + C+P
Sbjct: 337 DALCFKKRIPEALEVLREMNERD-CQP--------------------------------- 362
Query: 446 HLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQ 498
D+ TY +I LC+ + E Y L +M P +T +L K+
Sbjct: 363 ----DVATYNSLIKHLCKIQRFEKVYELLDDMEQKGCLPNARTYGYLLKSTKK 411
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 117/447 (26%), Positives = 202/447 (45%), Gaps = 44/447 (9%)
Query: 101 YLVNKLIHRFKDDW--KSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLE 158
Y N LIH K AL ++R S G + S + + ++ GK R + + LLE
Sbjct: 195 YSYNGLIHFLLQSGFCKEALEVYRRMVS-EGLKPSLKTFSALMVASGKRRNIKTVMGLLE 253
Query: 159 EM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEG 217
EM S G + T +R G+ ++A R + G + T +L+D LC
Sbjct: 254 EMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTAR 313
Query: 218 KVELARSVFLELKSC------------------------------------IPPNAHTFN 241
K++ A +F ++KS P+ TF
Sbjct: 314 KLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFT 373
Query: 242 IFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ 301
I ++ CK R++EA + M+ G P + +Y+T+I R +L M++
Sbjct: 374 ILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESL 433
Query: 302 GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
G P TY ++ Y KSG +A+ EKMK G P+ N +Y+L R+ EA
Sbjct: 434 GVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEA 493
Query: 362 VYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLL 421
++ E+ +G+APD+ T+N M+ +S G ++A +L EM+K++ C+P+V + L+
Sbjct: 494 KAMFN-ELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQ-CEPDVIVINSLI 551
Query: 422 KSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHD 481
+ +K G+ +E + + +L+ + TY +++ GL + + + A LF+ M GH
Sbjct: 552 DTLYKAGRVEEAWQMFC--RMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHG 609
Query: 482 ITPRYQTCRLILDEVKQKHMYDAAEKI 508
+P T +LD + + D A K+
Sbjct: 610 CSPNTITFNTLLDCLCKNDEVDLALKM 636
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 108/406 (26%), Positives = 178/406 (43%), Gaps = 43/406 (10%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +++D L R++D L +M S H T ++ +FS G + + + E+
Sbjct: 302 YTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEME 361
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
G + T +L++ LCK G++ A + + K + PN HT+N I G + NR+D
Sbjct: 362 ADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLD 421
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV------- 307
+A M+ G P +Y +I + + + K E ++M+A+G PN+
Sbjct: 422 DALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASL 481
Query: 308 ----------------------------VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
VTY +M +K G +EAI++ +M V +
Sbjct: 482 YSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCE 541
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
PD N LI TL +A RV+EA ++ M E +AP T+N ++ G +KA
Sbjct: 542 PDVIVINSLIDTLYKAGRVEEAWQMF-CRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQ 600
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIH 459
+ E MN C PN TF+ LL K + D L + + D+ T+ +IH
Sbjct: 601 LFESMNG-HGCSPNTITFNTLLDCLCKNDEVDLALKMFYK--MTTMNCRPDVLTFNTIIH 657
Query: 460 GLCRANKCEWAYLLFKEMIGHDITPRYQT-CRLILDEVKQKHMYDA 504
G + N+ + A LF +M + P + T C L+ +K + DA
Sbjct: 658 GFIKQNQIKNAIWLFHQM-KKLLRPDHVTLCTLLPGVIKSGQIEDA 702
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 155/310 (50%), Gaps = 6/310 (1%)
Query: 201 KNTETMNLLLDTLCKEGKVELARSVFLELKS--CIPPNAHTFNIFIHGWCKINRVDEAQW 258
K+ + ++ LCK K +AR+VF++ + P +N+ I G+ +++ V+ A
Sbjct: 752 KDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWN 811
Query: 259 TIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLA 318
+EMK GC P +Y+++I ++ + +++++L DEM +GC PN +TY V+S L
Sbjct: 812 LFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLV 871
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDT 378
KS ++A+ + + P F LI L ++ R+ +A ++ M G P++
Sbjct: 872 KSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFD-GMVHYGCRPNS 930
Query: 379 STFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLL 438
+ +N ++ + GH + A + M K E +P+++++ L+ G+ D+ L
Sbjct: 931 AIYNILVNGYGKLGHVDTACEFFKRMVK-EGIRPDLKSYTILVDILCIAGRVDDALHYF- 988
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQ 498
+ + + L D+ Y L+I+GL R+ + E A LF EM I P T ++ +
Sbjct: 989 -EKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGI 1047
Query: 499 KHMYDAAEKI 508
M + A KI
Sbjct: 1048 VGMIEEAGKI 1057
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 117/448 (26%), Positives = 196/448 (43%), Gaps = 71/448 (15%)
Query: 69 VIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCP 128
V+ K GSS DEV L ++ IH AL F+ G P
Sbjct: 80 VVNGKPRKGSSSDEVLGVLHS-------------ISDPIH--------ALFYFKSVGELP 118
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAV 188
H++E M++IL R+++ M + + M + +++RR
Sbjct: 119 NVVHTTETCNHMLEILRVHRRVEDMAFVFDLMQR----------QIIRR----------- 157
Query: 189 RTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIH-- 245
N +T ++ +L G + A S +++ + NA+++N IH
Sbjct: 158 -------------NVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFL 204
Query: 246 ---GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
G+CK EA + M G P + ++S ++ + ++ N V LL+EM++ G
Sbjct: 205 LQSGFCK-----EALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMG 259
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
PN+ TYT + L + G +EA RI ++M G PD + LI L A ++ +A+
Sbjct: 260 LRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAM 319
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLK 422
++ +M + PD T+ T++ FS GH +K + EM + + P+V TF L+
Sbjct: 320 CLF-TKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEM-EADGYAPDVVTFTILVN 377
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
+ K G+ +E L D + K + ++ TY +I GL RAN+ + A LF M +
Sbjct: 378 ALCKAGRINEAFDLL--DTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGV 435
Query: 483 TPRYQTCRLILD-EVKQKHMYDAAEKIE 509
P T L++D K H A E E
Sbjct: 436 EPTAYTYILLIDYHGKSGHPGKALETFE 463
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 161/362 (44%), Gaps = 41/362 (11%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G + + ++Y +++D +V ++ L EEM S G T ++ +G+ +
Sbjct: 785 GVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINEL 844
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHG 246
+DE+ T G + NT T N+++ L K +++ A ++ L S P TF I G
Sbjct: 845 FDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDG 904
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
K R+D+A M +GC P Y+ ++ Y + + E M +G P+
Sbjct: 905 LLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPD 964
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
+ +YT ++ L +G ++A+ EK+K G PD +N +I LGR+ R +EA+ ++
Sbjct: 965 LKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFH 1024
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
EM G+ PD T+N++I G E+A + EE+ + KPNV T++ L++
Sbjct: 1025 -EMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEEL-QFIGLKPNVFTYNALIRG--- 1079
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
YTL + E AY ++K+M+ P
Sbjct: 1080 ---------------------------YTL-------SGNSELAYGIYKKMMVGGCDPNT 1105
Query: 487 QT 488
T
Sbjct: 1106 GT 1107
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 173/374 (46%), Gaps = 18/374 (4%)
Query: 55 QVLCVDSPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKD-- 112
+ +C D L I ++ K S VF ++ ++P+ + N LI F +
Sbjct: 748 RAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKEL---GVKPTLKVYNLLIDGFLEVH 804
Query: 113 DWKSALGIF---RWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTL 168
+ + A +F + AG P + Y ++D GK +++++ L +EM ++G
Sbjct: 805 NVEVAWNLFEEMKSAGCAP----DTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNT 860
Query: 169 NTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE 228
T V+ + + + A+ + L + T L+D L K G+++ A +F
Sbjct: 861 ITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDG 920
Query: 229 L--KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQY 286
+ C PN+ +NI ++G+ K+ VD A + M G P + SY+ ++ C
Sbjct: 921 MVHYGC-RPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAG 979
Query: 287 NFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFN 346
++++ G P++V Y +++ L +S EEA+ + +M+ G PD +N
Sbjct: 980 RVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYN 1039
Query: 347 CLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNK 406
LI LG ++EA +Y+ E+ G+ P+ T+N +I ++ G+ E A+ + ++M
Sbjct: 1040 SLILNLGIVGMIEEAGKIYE-ELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKM-M 1097
Query: 407 LEHCKPNVQTFHPL 420
+ C PN TF L
Sbjct: 1098 VGGCDPNTGTFAQL 1111
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 94/438 (21%), Positives = 195/438 (44%), Gaps = 16/438 (3%)
Query: 82 EVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMV 141
++ ++++ V + + L++ L+ + D AL +F S G E ++ Y +++
Sbjct: 390 DLLDTMRKQGVLPNLHTYNTLISGLLRANRLD--DALDLFSNMESL-GVEPTAYTYILLI 446
Query: 142 DILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGA--GQWEDAVRTFDELGTFGL 199
D GK + E+M K + N +A +S A G+ +A F+EL + GL
Sbjct: 447 DYHGKSGHPGKALETFEKM-KARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGL 505
Query: 200 EKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQW 258
++ T N+++ K G+V+ A + E+ K P+ N I K RV+EA
Sbjct: 506 APDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQ 565
Query: 259 TIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLA 318
M+ P V++Y+ ++ ++ K +L + M GC PN +T+ T++ L
Sbjct: 566 MFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLC 625
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDT 378
K+ + + A+++ KM + +PD FN +I+ + ++++ A++++ + + PD
Sbjct: 626 KNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFH--QMKKLLRPDH 683
Query: 379 STFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLL 438
T T++ G E AF + E+ + + ++ T++ + L
Sbjct: 684 VTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAI--LF 741
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWA---YLLFKEMIGHDITPRYQTCRLILDE 495
+ + + D + +I LC+ K A ++ F + +G + P + L++D
Sbjct: 742 GERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELG--VKPTLKVYNLLIDG 799
Query: 496 VKQKHMYDAAEKIEAVMK 513
+ H + A + MK
Sbjct: 800 FLEVHNVEVAWNLFEEMK 817
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/297 (20%), Positives = 127/297 (42%), Gaps = 35/297 (11%)
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
RV++ + M+ V +Y I +S + + L++M+ G N +Y
Sbjct: 139 RVEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYN 198
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
++ +L +SG +EA+ + +M G KP + F+ L+ G+ ++ + + + EM
Sbjct: 199 GLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLE-EMES 257
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
G+ P+ T+ I + G ++A+ +++ M+ + C P+V T+ L+ + K D
Sbjct: 258 MGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDD-DGCGPDVVTYTVLIDALCTARKLD 316
Query: 432 ECL------------------SQLLDDMVNKHHL---------------SLDITTYTLVI 458
+ + LLD + HL + D+ T+T+++
Sbjct: 317 DAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILV 376
Query: 459 HGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
+ LC+A + A+ L M + P T ++ + + + D A + + M+ L
Sbjct: 377 NALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESL 433
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 111/376 (29%), Positives = 181/376 (48%), Gaps = 10/376 (2%)
Query: 120 IFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRF 178
I+ G CP + +V+ L + + Q +++ M KG + + T ++
Sbjct: 292 IYEEEGFCP----DQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGL 347
Query: 179 SGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNA 237
G+ ++AV + + E NT T N L+ TLCKE VE A + L S + P+
Sbjct: 348 CKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDV 407
Query: 238 HTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDE 297
TFN I G C + + A +EMK GC P +YS +I+S C + + LL E
Sbjct: 408 CTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKE 467
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
M+ GC NVV Y T++ L K+ +A I ++M+++G S +N LI L ++ R
Sbjct: 468 MELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKR 527
Query: 358 VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTF 417
V+EA + +M G+ PD T+ TM+ F G ++A +++ M L C+P++ T+
Sbjct: 528 VEEAAQLMD-QMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMT-LNGCEPDIVTY 585
Query: 418 HPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
L+ K G+ D S+LL V + L Y VI LC+ + + A LF+EM
Sbjct: 586 GTLIGGLCKAGRVD-VASKLLRS-VQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREM 643
Query: 478 IGHDITPRYQTCRLIL 493
+ P T +++
Sbjct: 644 MEKGDPPDVITYKIVF 659
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 174/373 (46%), Gaps = 10/373 (2%)
Query: 109 RFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI-VT 167
R + D SAL +F+WA + P Y ++ ++ L + D M LL +M I V
Sbjct: 67 RRQPDSSSALSLFQWASAQPNYSAHPSVFHELLRQLARAGSFDSMLTLLRQMHSSKIPVD 126
Query: 168 LNTIAKVMRRFSGAGQWEDAVRTFDEL--GTFGLEKNTETMNLLLDTLCKEGKVELARSV 225
+T + ++ + + L F ++ +T N+ L L K K++L ++
Sbjct: 127 ESTFLIFLETYATSHHLHAEINPLFLLMERDFAVKPDTRFYNVALSLLVKANKLKLVETL 186
Query: 226 FLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCR 284
++ +PP+ TFNI I CK +++ A +++M +G P +++T++Q +
Sbjct: 187 HSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIE 246
Query: 285 QYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRF 344
+ + + + M GC V+ +++ L K G EEA+R + + G PD
Sbjct: 247 EADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYEEE--GFCPDQVT 304
Query: 345 FNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
FN L+ L R +++ + + M E G D T+N++I+ G ++A +L M
Sbjct: 305 FNALVNGLCRTGHIKQGLEMMDF-MLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHM 363
Query: 405 NKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRA 464
C+PN T++ L+ + K E ++L + +K L D+ T+ +I GLC
Sbjct: 364 VS-RDCEPNTVTYNTLIGTLCKENHV-EAATELARVLTSKGVLP-DVCTFNSLIQGLCLT 420
Query: 465 NKCEWAYLLFKEM 477
+ E A LF+EM
Sbjct: 421 SNREIAMELFEEM 433
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 167/350 (47%), Gaps = 8/350 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
+ +++ L K Q+ +LE+M G T +M+ F E A+R + +
Sbjct: 202 FNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMV 261
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELA-RSVFLELKSCIPPNAHTFNIFIHGWCKINRVD 254
G E + ++N+L++ LCKEG++E A R ++ E C P+ TFN ++G C+ +
Sbjct: 262 ESGCELTSVSVNVLVNGLCKEGRIEEALRFIYEEEGFC--PDQVTFNALVNGLCRTGHIK 319
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
+ + M G V +Y+++I C+ + E+L M ++ C PN VTY T++
Sbjct: 320 QGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLI 379
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
L K E A + + G PD FN LI L S + A+ +++ EM E G
Sbjct: 380 GTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFE-EMKEKGC 438
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
PD T++ +I ++A +L+EM +L C NV ++ L+ K + +
Sbjct: 439 DPDEFTYSILIESLCSERRLKEALMLLKEM-ELSGCARNVVVYNTLIDGLCKNNRVGD-- 495
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
++ + D + +S TY +I+GLC++ + E A L +MI + P
Sbjct: 496 AEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKP 545
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 109/253 (43%), Gaps = 44/253 (17%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKG----HIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++++ L R++ + LL+EM ++V NT+ + + + G ED FD
Sbjct: 445 YSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAED---IFD 501
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKIN 251
++ G+ +++ T N L++ LCK +VE A + ++ + P+ T+ + +C+
Sbjct: 502 QMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQG 561
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYST---------------------------------- 277
+ A +Q M +GC P +++Y T
Sbjct: 562 DIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYN 621
Query: 278 -IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGD-FEEAIRITEKMKI 335
+IQ+ C++ + L EM +G PP+V+TY V L G +EA+ T +M
Sbjct: 622 PVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLE 681
Query: 336 VGSKPDSRFFNCL 348
G P+ F L
Sbjct: 682 KGILPEFPSFGFL 694
>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
Length = 775
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 185/380 (48%), Gaps = 26/380 (6%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGH------------IVTLNTIA----KVMRRFSG 180
+ ++++ + K R++D +LE+MS G +V NT+ KV R+ G
Sbjct: 343 FGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEG 402
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHT 239
G E +R+ G +T T N L+D CK G++E + +F E+ K + PN T
Sbjct: 403 LGLME-RMRSQK-----GCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVT 456
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
N + G C+ RV A E + G ++Y+ +I ++C NF K EL +EM
Sbjct: 457 VNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEML 516
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
GC P+ + Y T++S +++G +A + ++K +G +PD+ +N LI R ++
Sbjct: 517 KSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFH 576
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
V+ EM E G+ PDT T+NT+I S +G + A V+ +M K P V T+
Sbjct: 577 R-VFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIK-AGVVPTVATYGA 634
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
++ + G +E + ++ DM + + Y ++I+ LC+ NK + A L ++M
Sbjct: 635 VINAYCLNGNGNEAM-EIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKI 693
Query: 480 HDITPRYQTCRLILDEVKQK 499
+TP T I ++ +
Sbjct: 694 WGVTPNTTTYNAIFKGLRDE 713
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 180/377 (47%), Gaps = 16/377 (4%)
Query: 95 AIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQ 152
+++P + N LI + LG+ S G + Y ++D K ++++
Sbjct: 378 SVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEK 437
Query: 153 MRALLEEMSK----GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNL 208
+ L +EM+K ++VT+NT+ M R G+ AV F E G++ + T
Sbjct: 438 GKELFDEMNKEGVAPNVVTVNTLVGGMCR---TGRVSSAVNFFVEAQRRGMKGDAVTYTA 494
Query: 209 LLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG 267
L++ C E A +F E LKS P+A + I G+ + R+ +A + + E+K G
Sbjct: 495 LINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLG 554
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
P + Y+T+I +CR F +V+E+L EM+ G P+ +TY T+++Y +K+GD + A
Sbjct: 555 IRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQ 614
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITM 387
++ KM G P + +I EA+ +++ + V P+T +N +I
Sbjct: 615 KVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINS 674
Query: 388 FSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMV----N 443
+ + A ++E+M K+ PN T++ + K + K E + + +D M+ N
Sbjct: 675 LCKNNKVKSAVSLMEDM-KIWGVTPNTTTYNAIFKG-LRDEKDLEKVFEFMDRMIEHACN 732
Query: 444 KHHLSLDITTYTLVIHG 460
+++++I T L G
Sbjct: 733 PDYITMEILTEWLSAVG 749
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 148/335 (44%), Gaps = 17/335 (5%)
Query: 191 FDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCK 249
F E+ G + N LL L +EG + ++ I PN TF I I+ CK
Sbjct: 293 FTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCK 352
Query: 250 INRVDEAQWTIQEMKGH--------GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ 301
RVD+A +++M G P V+ Y+T+I C+ + L++ M++Q
Sbjct: 353 FRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQ 412
Query: 302 -GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
GC P+ +TY ++ K+G+ E+ + ++M G P+ N L+ + R RV
Sbjct: 413 KGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSS 472
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
AV + VE G+ D T+ +I F + + EKA + EM K C P+ ++ L
Sbjct: 473 AVNFF-VEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLK-SGCSPDAIVYYTL 530
Query: 421 LKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH 480
+ + G+ + L + + K + D Y +I G CR NK + + KEM
Sbjct: 531 ISGFSQAGRMADASFVLAE--LKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEA 588
Query: 481 DITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
+ P T ++ + A+K VM+K+
Sbjct: 589 GLKPDTITYNTLIAYASKNGDLKFAQK---VMRKM 620
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 99/404 (24%), Positives = 161/404 (39%), Gaps = 59/404 (14%)
Query: 166 VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSV 225
+T+N + ++R + E+++ F++L KNT N+ L L + G+V+ A V
Sbjct: 155 LTVNAASFLLRASGRSELVEESLILFNDLDPS--VKNTYLRNVWLSILLRSGRVKDALKV 212
Query: 226 FLEL-----KSCIPPNAHTFNIFIHGWCKINRVDE---AQWTIQEMKGHGCHPCVIS--- 274
E+ S PN T +I K R +E + + G H +IS
Sbjct: 213 IDEMFESNDDSNCRPNDATGDILFSFLLKRERNEELLSEDEIVNLVLKFGEHGVLISSFW 272
Query: 275 YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM- 333
+I CR ++ ++L EM G ++++ LA+ G+F + EKM
Sbjct: 273 MGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMV 332
Query: 334 --------------------------------KIVGSK----------PDSRFFNCLIYT 351
K+ G K PD +N LI
Sbjct: 333 EMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDG 392
Query: 352 LGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCK 411
L + R QE + + + + G APDT T+N +I F G EK + +EMNK E
Sbjct: 393 LCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNK-EGVA 451
Query: 412 PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAY 471
PNV T + L+ +TG+ ++ ++ + + D TYT +I+ C N E A
Sbjct: 452 PNVVTVNTLVGGMCRTGRVSSAVNFFVE--AQRRGMKGDAVTYTALINAFCNVNNFEKAM 509
Query: 472 LLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
LF EM+ +P ++ Q A + A +KKL
Sbjct: 510 ELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKL 553
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 82/179 (45%), Gaps = 5/179 (2%)
Query: 148 RQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN 207
R + ++ + E K +T NT+ S G + A + ++ G+ T
Sbjct: 577 RVFEMLKEMEEAGLKPDTITYNTLIAYA---SKNGDLKFAQKVMRKMIKAGVVPTVATYG 633
Query: 208 LLLDTLCKEGKVELARSVFLELKSC--IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKG 265
+++ C G A +F ++K+ +PPN +NI I+ CK N+V A +++MK
Sbjct: 634 AVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKI 693
Query: 266 HGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
G P +Y+ I + + + KV+E +D M C P+ +T + +L+ G+ E
Sbjct: 694 WGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGEIE 752
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 115/422 (27%), Positives = 203/422 (48%), Gaps = 9/422 (2%)
Query: 95 AIQPSHYLVNKLIHRFKDDWKSAL-GIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQM 153
++P + N++++ D L I S G + + +++ L + Q+
Sbjct: 149 GLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPA 208
Query: 154 RALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDT 212
+LE+M S G + T VM+ + G + A+R +++ FG + ++N+++
Sbjct: 209 ILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHG 268
Query: 213 LCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHP 270
CKEG+VE A + E+ + P+ +TFN ++G CK V A + M G P
Sbjct: 269 FCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDP 328
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRIT 330
V +Y+++I C+ + E+LD+M + C PN VTY T++S L K EEA +
Sbjct: 329 DVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELA 388
Query: 331 EKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSH 390
+ G PD FN LI L + A+ +++ EM G PD T+N +I
Sbjct: 389 RVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFE-EMRSKGCEPDEFTYNMLIDSLCS 447
Query: 391 HGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLD 450
G ++A ++L++M +L C +V T++ L+ K KT E ++ D+M H +S +
Sbjct: 448 KGKLDEALNMLKQM-ELSGCARSVITYNTLIDGFCKANKTREA-EEIFDEM-EVHGVSRN 504
Query: 451 ITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP-RYQTCRLILDEVKQKHMYDAAEKIE 509
TY +I GLC++ + E A L +MI P +Y L+ + + AA+ ++
Sbjct: 505 SVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQ 564
Query: 510 AV 511
A+
Sbjct: 565 AM 566
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 117/482 (24%), Positives = 214/482 (44%), Gaps = 85/482 (17%)
Query: 109 RFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTL 168
R + D +AL +F A P + +YE ++ LG+ D M+ +LE+M
Sbjct: 58 RSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMG 117
Query: 169 NTIAKVMRRFSGAGQWEDAVRT-----FDELG---------------------------- 195
+ ++ + +D + + DE G
Sbjct: 118 TSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISH 177
Query: 196 ----TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTF---------- 240
+G++ + T N+L+ LC+ ++ A + ++ S + P+ TF
Sbjct: 178 AKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEE 237
Query: 241 -------------------------NIFIHGWCKINRVDEAQWTIQEMKGH-GCHPCVIS 274
N+ +HG+CK RV++A IQEM G P +
Sbjct: 238 GDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYT 297
Query: 275 YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
++T++ C+ + E++D M +G P+V TY +V+S L K G+ +EA+ + ++M
Sbjct: 298 FNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMI 357
Query: 335 IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHH 394
P++ +N LI TL + ++V+EA + +V + G+ PD TFN++I +H
Sbjct: 358 TRDCSPNTVTYNTLISTLCKENQVEEATELARV-LTSKGILPDVCTFNSLIQGLCLTRNH 416
Query: 395 EKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS---LDI 451
A + EEM + + C+P+ T++ L+ S GK DE L +M+ + LS +
Sbjct: 417 RVAMELFEEM-RSKGCEPDEFTYNMLIDSLCSKGKLDEAL-----NMLKQMELSGCARSV 470
Query: 452 TTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEA 510
TY +I G C+ANK A +F EM H ++ T ++D + K + + DAA+ ++
Sbjct: 471 ITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQ 530
Query: 511 VM 512
++
Sbjct: 531 MI 532
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 113/460 (24%), Positives = 209/460 (45%), Gaps = 50/460 (10%)
Query: 99 SHYLVNKLIHRFKDDWK--SALGIFRWAGSCPGYEHSSEIYEMMVDIL---GKVR-QMDQ 152
S+ VN ++H F + + AL + + G+ + +V+ L G V+ ++
Sbjct: 258 SNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEI 317
Query: 153 MRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDT 212
M +L+E + T N++ + + G+ ++AV D++ T NT T N L+ T
Sbjct: 318 MDVMLQEGYDPDVYTYNSVISGLCKL---GEVKEAVEVLDQMITRDCSPNTVTYNTLIST 374
Query: 213 LCKEGKVE-----------------------------------LARSVFLELKS-CIPPN 236
LCKE +VE +A +F E++S P+
Sbjct: 375 LCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPD 434
Query: 237 AHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLD 296
T+N+ I C ++DEA +++M+ GC VI+Y+T+I +C+ + E+ D
Sbjct: 435 EFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFD 494
Query: 297 EMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRAS 356
EM+ G N VTY T++ L KS E+A ++ ++M + G KPD +N L+ R
Sbjct: 495 EMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGG 554
Query: 357 RVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQT 416
+++A + Q M NG PD T+ T+I+ G E A +L + +++
Sbjct: 555 DIKKAADIVQA-MTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSI-QMKGINLTPHA 612
Query: 417 FHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCR-ANKCEWAYLLFK 475
++P+++ F+ KT E ++ L +M+ ++ D +Y +V GLC A
Sbjct: 613 YNPVIQGLFRKRKTTEAIN-LFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLV 671
Query: 476 EMIGHDITPRYQTCRLILDEVKQKHMYDAAEK-IEAVMKK 514
E++ P + + ++ + + M + K + VM+K
Sbjct: 672 ELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQK 711
>gi|357131182|ref|XP_003567219.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Brachypodium distachyon]
Length = 518
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 125/442 (28%), Positives = 207/442 (46%), Gaps = 17/442 (3%)
Query: 54 HQVLCVDSPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDD 113
HQ L D R +D +++ ++ ++L + C A S LV + R ++
Sbjct: 59 HQQLPADVVR--GVDAVVAAAEGSHADATRARTLLER--CGAAA-SETLVVAALSRLRNS 113
Query: 114 WKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAK 173
W +A F WA + P Y M+ IL K R+ D RALL+EM + + + +
Sbjct: 114 WAAAHAAFLWAAAQPDYAPGRHACHSMLAILAKHRRFDDARALLDEMRRKSLASPRAVLL 173
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCI 233
++RR+ A A+ F L +FG E + LL LC+ V+ A + L +
Sbjct: 174 LVRRYCAARDVTRAIAAFHALPSFGFEPGVAQFHGLLSALCRYKNVQDAEHLLLSSEKEF 233
Query: 234 PPNAHTFNIFIHGWCK-INRVDEAQ--WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSK 290
P +FNI ++GWC + V EA+ WT E++ G V SY ++I + + +
Sbjct: 234 PFETKSFNIVLNGWCNMVCSVREAKRFWTAMEVR--GIERDVASYGSMISCFSKAGSLDS 291
Query: 291 VYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIY 350
V +L + M+ G P+ Y V+ LAK +EA + M+ G+ PD+ +N LI
Sbjct: 292 VLKLFNGMKEAGIVPDRKVYNAVVYALAKGRCVDEAKALVRSMEERGTPPDTATYNSLIG 351
Query: 351 TLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHC 410
L +A +VQEA ++ EM G+ TF+ +F + F VL++M L HC
Sbjct: 352 PLCKARQVQEATQMFD-EMIGRGLLASVRTFH---ALFDVATSPSEVFDVLDKMKTL-HC 406
Query: 411 KPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWA 470
+P + T+ L++ F + + + +L M + L+ D + Y ++IHGL K E A
Sbjct: 407 EPEIDTYIMLIRK-FCRWRQHDSVEKLWSAMPT-NGLNPDRSAYIVLIHGLFLNGKLEEA 464
Query: 471 YLLFKEMIGHDITPRYQTCRLI 492
++EM P +T +I
Sbjct: 465 AKYYEEMKAKGFPPEQKTESMI 486
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/283 (19%), Positives = 120/283 (42%), Gaps = 16/283 (5%)
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG-CHPCVISYSTIIQSYCRQYNFSKVYE 293
P H + + K R D+A+ + EM+ P + +++ YC + ++
Sbjct: 132 PGRHACHSMLAILAKHRRFDDARALLDEMRRKSLASPRAVLL--LVRRYCAARDVTRAIA 189
Query: 294 LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP---DSRFFNCLIY 350
+ + G P V + ++S L + + ++A E + + K +++ FN ++
Sbjct: 190 AFHALPSFGFEPGVAQFHGLLSALCRYKNVQDA----EHLLLSSEKEFPFETKSFNIVLN 245
Query: 351 TL-GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH 409
V+EA + M G+ D +++ +MI+ FS G + + M K
Sbjct: 246 GWCNMVCSVREAKRFWTA-MEVRGIERDVASYGSMISCFSKAGSLDSVLKLFNGM-KEAG 303
Query: 410 CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEW 469
P+ + ++ ++ + K DE ++ L + + D TY +I LC+A + +
Sbjct: 304 IVPDRKVYNAVVYALAKGRCVDE--AKALVRSMEERGTPPDTATYNSLIGPLCKARQVQE 361
Query: 470 AYLLFKEMIGHDITPRYQTCRLILD-EVKQKHMYDAAEKIEAV 511
A +F EMIG + +T + D ++D +K++ +
Sbjct: 362 ATQMFDEMIGRGLLASVRTFHALFDVATSPSEVFDVLDKMKTL 404
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 82/185 (44%), Gaps = 5/185 (2%)
Query: 135 EIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDE 193
++Y +V L K R +D+ +AL+ M +G T ++ A Q ++A + FDE
Sbjct: 309 KVYNAVVYALAKGRCVDEAKALVRSMEERGTPPDTATYNSLIGPLCKARQVQEATQMFDE 368
Query: 194 LGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINR 252
+ GL + T + L D +V V ++K+ P T+ + I +C+ +
Sbjct: 369 MIGRGLLASVRTFHALFDVATSPSEV---FDVLDKMKTLHCEPEIDTYIMLIRKFCRWRQ 425
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
D + M +G +P +Y +I + + +EM+A+G PP T +
Sbjct: 426 HDSVEKLWSAMPTNGLNPDRSAYIVLIHGLFLNGKLEEAAKYYEEMKAKGFPPEQKTESM 485
Query: 313 VMSYL 317
+ ++L
Sbjct: 486 IQAWL 490
>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
Length = 1113
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 116/433 (26%), Positives = 194/433 (44%), Gaps = 46/433 (10%)
Query: 115 KSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAK 173
+ AL ++R S G + S + Y ++ LGK R ++ + LL+EM S G + T
Sbjct: 209 REALKVYRRMVS-EGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTI 267
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC- 232
+R AG+ ++A + G + T +L+D LC GK+ A+ +FL++K+
Sbjct: 268 CIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASS 327
Query: 233 -----------------------------------IPPNAHTFNIFIHGWCKINRVDEAQ 257
P+ TF I I CK+ +VDEA
Sbjct: 328 HKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAF 387
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
T+ MK G P + +Y+T+I R + EL + M++ G TY + Y
Sbjct: 388 GTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYY 447
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
KSG+ +AI+ EKMK G P+ N +Y+L R++EA + + + G+APD
Sbjct: 448 GKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFN-GLKKCGLAPD 506
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC--LS 435
T+N ++ + G + A +L EM + C P V + L+ + +K + DE +
Sbjct: 507 AITYNILMRCYGKAGRVDDAIKLLSEMEE-NGCDPEVVIINSLIDTLYKADRVDEAWKMF 565
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE 495
Q + +M L+ + TY ++ GL + + + A LFK MI D P + +LD
Sbjct: 566 QRMKEM----KLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDC 621
Query: 496 VKQKHMYDAAEKI 508
+ + D A K+
Sbjct: 622 LCKNGEVDLALKM 634
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 127/476 (26%), Positives = 209/476 (43%), Gaps = 55/476 (11%)
Query: 74 VHVGSSED-EVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWK--SALGIFRW---AGSC 127
V +G D E L Q+ ++P+ Y I K A GI + AG
Sbjct: 235 VALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCG 294
Query: 128 PGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWED 186
P Y +++D L +++ + L +M + H T ++ +FS G D
Sbjct: 295 P----DVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDL-D 349
Query: 187 AVRTF-DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFI 244
A++ F E+ G + T +L+D LCK GKV+ A + K + PN HT+N I
Sbjct: 350 AIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLI 409
Query: 245 HGWCKINRVDEAQ-----------------------------------WTIQEMKGHGCH 269
G ++NR+DEA T ++MK +G
Sbjct: 410 CGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIV 469
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI 329
P +++ + + S Q + E + ++ G P+ +TY +M K+G ++AI++
Sbjct: 470 PNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKL 529
Query: 330 TEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFS 389
+M+ G P+ N LI TL +A RV EA ++Q M E +AP T+NT++
Sbjct: 530 LSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQ-RMKEMKLAPTVVTYNTLLAGLG 588
Query: 390 HHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSL 449
G ++A + + M + C PN +F+ LL K G+ D L L + + +
Sbjct: 589 KEGRVQEATALFKGMIA-DDCPPNTISFNTLLDCLCKNGEVDLALKMLFR--MTEMNCFP 645
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT-CRLILDEVKQKHMYDA 504
D+ TY VI+GL + N+ +A+ LF +M I P Y T C L+ +K + DA
Sbjct: 646 DVLTYNTVIYGLIKENRVNYAFWLFHQM-KKVIYPDYVTLCTLLPGVIKDGRIEDA 700
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 146/303 (48%), Gaps = 8/303 (2%)
Query: 209 LLDTLCKEGKVELARSVFLELKS--CIPPNAHTFNIFIHGWCKINRVDEAQWTI-QEMKG 265
L+ LCK GK A +VFL+L CI P+ +N I G K R+ E W + +MK
Sbjct: 758 LVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKA-RLTEMAWGLFYKMKN 816
Query: 266 HGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEE 325
GC P V +Y+ + + + ++++L +EM +GC PN +T+ V+ L KS ++
Sbjct: 817 AGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDK 876
Query: 326 AIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMI 385
AI + + P + LI L + R++EA ++ EM + G P+ +N ++
Sbjct: 877 AIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFE-EMLDYGCMPNCPLYNILM 935
Query: 386 TMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKH 445
F G E A + M K E +P+++++ ++ GK D+ L + +
Sbjct: 936 NGFGKQGDVETACELFRRMVK-EGIRPDLKSYSIMVDCLCMVGKVDDALHYF--EELKLS 992
Query: 446 HLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
L D+ Y L+I+GL R+ + E A LF EM ITP T ++ + M + A
Sbjct: 993 GLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEA 1052
Query: 506 EKI 508
K+
Sbjct: 1053 GKM 1055
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 163/342 (47%), Gaps = 21/342 (6%)
Query: 133 SSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTF 191
S E Y ++D L K R + L +M + G + T + +G+ ++ +
Sbjct: 787 SLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLY 846
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKI 250
+E+ G + NT T N+++ L K ++ A ++ +L S P T+ I G K+
Sbjct: 847 EEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKL 906
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
R++EA+ +EM +GC P Y+ ++ + +Q + EL M +G P++ +Y
Sbjct: 907 GRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSY 966
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
+ ++ L G ++A+ E++K+ G PD +N +I LGR+ RV+EA+ ++ EM
Sbjct: 967 SIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFD-EMR 1025
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKT 430
G+ PD T+N +I G E+A + EE+ +L+ +PNV T++ L++ +G
Sbjct: 1026 NRGITPDLYTYNALILNLGIAGMVEEAGKMYEEL-QLKGLEPNVFTYNALIRGHSMSGNP 1084
Query: 431 DECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
D + Y ++ G CR N +A L
Sbjct: 1085 DRAYA-----------------VYKKMMVGGCRPNTGTFAQL 1109
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 122/493 (24%), Positives = 208/493 (42%), Gaps = 55/493 (11%)
Query: 64 LPDI---DVIISKVHVGSSEDEVFQSL---KQDHVCNAIQPSHYLVNKLIHRFKDDWKSA 117
LPD+ ++I + DE F +L K+ V + + L+ L+ + D A
Sbjct: 364 LPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLD--EA 421
Query: 118 LGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRR 177
L +F S G E ++ Y + +D GK + + E+M IV N +A
Sbjct: 422 LELFNSMESL-GLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVP-NIVACNASL 479
Query: 178 FSGA--GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIP 234
+S A G+ E+A F+ L GL + T N+L+ K G+V+ A + E++ +
Sbjct: 480 YSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCD 539
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYEL 294
P N I K +RVDEA Q MK P V++Y+T++ ++ + L
Sbjct: 540 PEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATAL 599
Query: 295 LDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGR 354
M A CPPN +++ T++ L K+G+ + A+++ +M + PD +N +IY L +
Sbjct: 600 FKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIK 659
Query: 355 ASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM--NKLEHCKP 412
+RV A +++ + + PD T T++ G E AF V +E + +H
Sbjct: 660 ENRVNYAFWLFH--QMKKVIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADG 717
Query: 413 NV---------------------------------QTFHPLLKSCFKTGKTDECLSQLLD 439
+ PL+K K GK + + L
Sbjct: 718 SFWEDLMGGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFL- 776
Query: 440 DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV--- 496
+ ++ + Y +I GL +A E A+ LF +M TP T L LD +
Sbjct: 777 KLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKS 836
Query: 497 -KQKHMYDAAEKI 508
K K ++D E++
Sbjct: 837 GKIKELFDLYEEM 849
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 98/406 (24%), Positives = 174/406 (42%), Gaps = 10/406 (2%)
Query: 113 DWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIV-TLNTI 171
D A F P H++E ++++L R+++ M + M K I ++NT
Sbjct: 101 DPNQAFSFFNSVAEMPRVIHTTETCNYVLEMLRAHRRVEDMVVVFNLMQKQIIKRSINTY 160
Query: 172 AKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS 231
+ + G +A +++ G N + L+ L K G A V+ + S
Sbjct: 161 LTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVS 220
Query: 232 -CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSK 290
I P+ T++ + K ++ +QEM+ G P + +++ I+ R +
Sbjct: 221 EGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDE 280
Query: 291 VYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIY 350
Y +L M GC P+VVTYT ++ L +G A + KMK KPD + L+
Sbjct: 281 AYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLD 340
Query: 351 TLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHC 410
+ +A+ + EM +G PD TF +I G ++AF L+ M K +
Sbjct: 341 KFSDHGDL-DAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKK-QGV 398
Query: 411 KPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYT--LVIHGLCRANKCE 468
PN+ T++ L+ + + DE L +L + M L L+ T YT L I ++ +
Sbjct: 399 APNLHTYNTLICGLLRLNRLDEAL-ELFNSM---ESLGLETTAYTYILFIDYYGKSGESG 454
Query: 469 WAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
A F++M + I P C L + ++ + A++ +KK
Sbjct: 455 KAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKK 500
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 160/336 (47%), Gaps = 9/336 (2%)
Query: 182 GQWEDAVRTFDELG-TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHT 239
G+ DA F +L +F + + E N L+D L K E+A +F ++K+ P+ T
Sbjct: 766 GKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFT 825
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+N+F+ K ++ E +EM GC P I+++ +I + + K +L ++
Sbjct: 826 YNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLM 885
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
+ P TY ++ L K G EEA + E+M G P+ +N L+ G+ V+
Sbjct: 886 SGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVE 945
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
A +++ M + G+ PD +++ M+ G + A H EE+ KL P++ ++
Sbjct: 946 TACELFR-RMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEEL-KLSGLDPDLVCYNL 1003
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
++ ++ + +E LS L D+M N+ ++ D+ TY +I L A E A +++E+
Sbjct: 1004 MINGLGRSQRVEEALS-LFDEMRNR-GITPDLYTYNALILNLGIAGMVEEAGKMYEELQL 1061
Query: 480 HDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
+ P T + ++ M ++ AV KK+
Sbjct: 1062 KGLEPNVFTYNAL---IRGHSMSGNPDRAYAVYKKM 1094
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 145/324 (44%), Gaps = 25/324 (7%)
Query: 203 TETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTF-----NIFIHGWCKINRVDEA 256
TET N +L+ L +VE VF L K I + +T+ ++I G + EA
Sbjct: 122 TETCNYVLEMLRAHRRVEDMVVVFNLMQKQIIKRSINTYLTIFKVLYIRGGLR-----EA 176
Query: 257 QWTIQEMKGHGCHPCVISYSTII-----QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
+++M+ G SY +I +CR+ KVY M ++G P++ TY+
Sbjct: 177 PVALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREA--LKVYR---RMVSEGIKPSLKTYS 231
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
+M L K D E + + ++M+ +G +P+ F I LGRA ++ EA + + M +
Sbjct: 232 ALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILK-RMDD 290
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
G PD T+ +I + G A + +M H KP+ T+ LL G D
Sbjct: 291 AGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSH-KPDRVTYITLLDKFSDHGDLD 349
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRL 491
+ + +M +L D+ T+T++I LC+ K + A+ M + P T
Sbjct: 350 -AIKEFWSEMEADGYLP-DVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNT 407
Query: 492 ILDEVKQKHMYDAAEKIEAVMKKL 515
++ + + + D A ++ M+ L
Sbjct: 408 LICGLLRLNRLDEALELFNSMESL 431
>gi|449488099|ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 118/450 (26%), Positives = 213/450 (47%), Gaps = 44/450 (9%)
Query: 105 KLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGH 164
++I RF D L F ++ + H+ Y++++ L KV D + + + M
Sbjct: 81 EVIKRFSDPLL-GLKFFEFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDG 139
Query: 165 IVTLNTIAKVM-RRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELAR 223
I+ ++I +++ ++ G+ + A +E+ +G++ + N LL+ L K+ V+ A
Sbjct: 140 ILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAV 199
Query: 224 SVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSY 282
+F E L+ P+ ++FNI I G C+I +D+A Q M GC P ++SY+T+I +
Sbjct: 200 LLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGF 259
Query: 283 CRQYNFSKVYELLDE-MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPD 341
CR SK ++LL E M +G P+V+TYT+++S K GD + A + ++M G KP+
Sbjct: 260 CRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPN 319
Query: 342 SRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVL 401
FN LI G+ ++ A+ +Y+ +M G PD TF ++I + G + +
Sbjct: 320 DFTFNVLIDGFGKVGNMRSAMVMYE-KMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLW 378
Query: 402 EEMNKLEHCKPNVQTF-----------------------------------HPLLKSCFK 426
EEM K+ + PNV T+ +P++ K
Sbjct: 379 EEM-KVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCK 437
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
GK DE + + + + D T+T++I G C + A F +MI + P
Sbjct: 438 AGKVDE--ANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDE 495
Query: 487 QTCRLILDEVKQKHMYDAAEKI-EAVMKKL 515
T ++ + + M + A +I +A ++KL
Sbjct: 496 ITINSLISCLLKAGMPNEASQIKQAALQKL 525
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 181/396 (45%), Gaps = 17/396 (4%)
Query: 64 LPD---IDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSAL 118
LPD +++++S D L + H C I+ S ++ N L++ ++ A+
Sbjct: 141 LPDSSILELLVSSYARMGKLDSAKNFLNEVH-CYGIKVSPFVYNNLLNMLVKQNLVDEAV 199
Query: 119 GIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK----GHIVTLNTIAKV 174
+FR P + + +++ L ++ ++D+ + M IV+ NT+
Sbjct: 200 LLFREHLE-PYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLING 258
Query: 175 MRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCI 233
R + + D ++ +++ G+ + T ++ CK G ++ A +F E+ S I
Sbjct: 259 FCRVNEISKGHDLLK--EDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGI 316
Query: 234 PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
PN TFN+ I G+ K+ + A ++M GC P V++++++I YCR+ ++ +
Sbjct: 317 KPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLK 376
Query: 294 LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLG 353
L +EM+ + PNV TY +++ L K EA +K P +N +I
Sbjct: 377 LWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFC 436
Query: 354 RASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPN 413
+A +V EA ++ EM E PD TF +I G +A +M ++ +C P+
Sbjct: 437 KAGKVDEANFIV-AEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEI-NCVPD 494
Query: 414 VQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSL 449
T + L+ K G +E SQ+ + K +L L
Sbjct: 495 EITINSLISCLLKAGMPNEA-SQIKQAALQKLNLGL 529
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 113/402 (28%), Positives = 196/402 (48%), Gaps = 17/402 (4%)
Query: 109 RFKDDWKSA--LGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHI 165
R K+A L I +G+ P Y +M+ K +++ ++L+ MS +
Sbjct: 149 RLGKTRKAAKILEILEGSGAVP----DVITYNVMISGYCKAGEINNALSVLDRMSVSPDV 204
Query: 166 VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSV 225
VT NTI +R +G+ + A+ D + + T +L++ C++ V A +
Sbjct: 205 VTYNTI---LRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKL 261
Query: 226 FLELK--SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYC 283
E++ C P + T+N+ ++G CK R+DEA + +M GC P VI+++ I++S C
Sbjct: 262 LDEMRDRGCTP-DVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMC 320
Query: 284 RQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSR 343
+ +LL +M +G P+VVT+ ++++L + G AI I EKM G +P+S
Sbjct: 321 STGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSL 380
Query: 344 FFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEE 403
+N L++ + ++ A+ Y M G PD T+NTM+T G E A +L +
Sbjct: 381 SYNPLLHGFCKEKKMDRAIE-YLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439
Query: 404 MNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCR 463
++ + C P + T++ ++ K GKT + + +LLD+M K L D TY+ ++ GL R
Sbjct: 440 LSS-KGCSPVLITYNTVIDGLAKAGKTGKAI-KLLDEMRAK-DLKPDTITYSSLVGGLSR 496
Query: 464 ANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
K + A F E I P T I+ + + D A
Sbjct: 497 EGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRA 538
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 169/313 (53%), Gaps = 11/313 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKG---HIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++V+ + K ++D+ L +M S G +++T N I +R G+W DA +
Sbjct: 277 YNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNII---LRSMCSTGRWMDAEKLLA 333
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKIN 251
++ G + T N+L++ LC++G + A + ++ + PN+ ++N +HG+CK
Sbjct: 334 DMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEK 393
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
++D A ++ M GC+P +++Y+T++ + C+ E+L+++ ++GC P ++TY
Sbjct: 394 KMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYN 453
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
TV+ LAK+G +AI++ ++M+ KPD+ ++ L+ L R +V EA+ + E
Sbjct: 454 TVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFH-EFER 512
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
G+ P+ TFN+++ ++A L M CKPN ++ L++ G
Sbjct: 513 MGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMIN-RGCKPNETSYTILIEGLAYEGMAK 571
Query: 432 ECLSQLLDDMVNK 444
E L +LL+++ NK
Sbjct: 572 EAL-ELLNELCNK 583
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 165/346 (47%), Gaps = 6/346 (1%)
Query: 163 GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELA 222
G++ + ++R F G+ A + + L G + T N+++ CK G++ A
Sbjct: 132 GNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNA 191
Query: 223 RSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSY 282
SV + + P+ T+N + C ++ +A + M C+P VI+Y+ +I++
Sbjct: 192 LSVLDRMS--VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEAT 249
Query: 283 CRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDS 342
CR +LLDEM+ +GC P+VVTY +++ + K G +EAI+ M G +P+
Sbjct: 250 CRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNV 309
Query: 343 RFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLE 402
N ++ ++ R +A + +M G +P TFN +I G +A +LE
Sbjct: 310 ITHNIILRSMCSTGRWMDAEKLL-ADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILE 368
Query: 403 EMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC 462
+M + C+PN +++PLL K K D + + L+ MV++ DI TY ++ LC
Sbjct: 369 KMPQ-HGCQPNSLSYNPLLHGFCKEKKMDRAI-EYLERMVSRGCYP-DIVTYNTMLTALC 425
Query: 463 RANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+ K E A + ++ +P T ++D + + A K+
Sbjct: 426 KDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKL 471
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 136/281 (48%), Gaps = 8/281 (2%)
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYEL 294
P+ I G+C++ + +A ++ ++G G P VI+Y+ +I YC+ + +
Sbjct: 135 PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSV 194
Query: 295 LDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGR 354
LD M P+VVTY T++ L SG ++A+ + ++M PD + LI R
Sbjct: 195 LDRMSVS---PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCR 251
Query: 355 ASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNV 414
S V A+ + EM + G PD T+N ++ G ++A L +M C+PNV
Sbjct: 252 DSGVGHAMKLLD-EMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPS-SGCQPNV 309
Query: 415 QTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLF 474
T + +L+S TG+ + +LL DM+ K S + T+ ++I+ LCR A +
Sbjct: 310 ITHNIILRSMCSTGRWMDA-EKLLADMLRK-GFSPSVVTFNILINFLCRKGLLGRAIDIL 367
Query: 475 KEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEAVMKK 514
++M H P + +L K+K M A E +E ++ +
Sbjct: 368 EKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR 408
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 126/275 (45%), Gaps = 19/275 (6%)
Query: 41 IESYCSDGARLDHHQVLCVD------SPRLPDIDVIIS----KVHVGSSEDEVFQSLKQD 90
+ S CS G +D ++L D SP + +++I+ K +G + D + + + Q
Sbjct: 316 LRSMCSTGRWMDAEKLL-ADMLRKGFSPSVVTFNILINFLCRKGLLGRAID-ILEKMPQ- 372
Query: 91 HVCNAIQPSHYLVNKLIHRFKDDWKSALGI-FRWAGSCPGYEHSSEIYEMMVDILGKVRQ 149
H C QP+ N L+H F + K I + G Y M+ L K +
Sbjct: 373 HGC---QPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGK 429
Query: 150 MDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNL 208
++ +L ++S KG L T V+ + AG+ A++ DE+ L+ +T T +
Sbjct: 430 VEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSS 489
Query: 209 LLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG 267
L+ L +EGKV+ A F E + I PNA TFN + G CK + D A + M G
Sbjct: 490 LVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRG 549
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
C P SY+ +I+ + + ELL+E+ +G
Sbjct: 550 CKPNETSYTILIEGLAYEGMAKEALELLNELCNKG 584
>gi|302780493|ref|XP_002972021.1| hypothetical protein SELMODRAFT_412471 [Selaginella moellendorffii]
gi|300160320|gb|EFJ26938.1| hypothetical protein SELMODRAFT_412471 [Selaginella moellendorffii]
Length = 2052
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 195/402 (48%), Gaps = 14/402 (3%)
Query: 113 DWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLN--T 170
D + + F W GY H++ + +++ L RQ + +L SK N T
Sbjct: 1640 DVEPTIQFFEWCHGRHGYTHTAFAFNRLLEFLVNKRQYKRAHQMLIAESKPSSFQANAFT 1699
Query: 171 IAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LE 228
+ ++R + G+ A+ + + + N + N++L LCK GK + A + +
Sbjct: 1700 YSTIVRGYCEDGETRQALALLEHMKKAEVPANAKLYNIILTHLCKHGKEKEALDLLHSMA 1759
Query: 229 LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYN- 287
SC P+ +T+NI I+ CK+ R+++AQ ++ M+ C +++Y+T+I CR+ N
Sbjct: 1760 TTSC-APDIYTYNILINALCKVGRLEDAQGLVEMMQARECPTDIVTYNTLIHGLCRKGNG 1818
Query: 288 ---FSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRF 344
+ + L +EM +G P VTYT V+ L + E+A ++ + M G D
Sbjct: 1819 RFRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMHENGCAFDLVT 1878
Query: 345 FNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
+N LI +A + +A+ ++ VEMP G PD T+N+++ F G E+A + EM
Sbjct: 1879 YNMLINRFAKAGMMDKAMDLF-VEMPTRGCIPDVVTYNSIVDGFCKAGKVEEANKLFAEM 1937
Query: 405 NKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRA 464
K PN +T+ + +C K G+ + + L++ + K L +D +Y +I +C+
Sbjct: 1938 -KARGIFPNGRTYTSITDACLKAGRMQDAHAYLVE--MRKEGL-VDAISYVALISTICKL 1993
Query: 465 NKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAE 506
K + + L +EM+ P T ++ + + ++ D A+
Sbjct: 1994 GKGKLGFQLLREMLEKGFKPNLVTFNVVFEALSKESNTDDAK 2035
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 141/282 (50%), Gaps = 9/282 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGH----IVTLNT-IAKVMRRFSGAGQWEDAVRTF 191
Y ++++ L KV +++ + L+E M IVT NT I + R+ +G + E A R F
Sbjct: 1770 YNILINALCKVGRLEDAQGLVEMMQARECPTDIVTYNTLIHGLCRKGNGRFRVERAFRLF 1829
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKI 250
+E+ G + T +++D L + E A+ V L ++ + T+N+ I+ + K
Sbjct: 1830 EEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMHENGCAFDLVTYNMLINRFAKA 1889
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
+D+A EM GC P V++Y++I+ +C+ + +L EM+A+G PN TY
Sbjct: 1890 GMMDKAMDLFVEMPTRGCIPDVVTYNSIVDGFCKAGKVEEANKLFAEMKARGIFPNGRTY 1949
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
T++ K+G ++A +M+ G D+ + LI T+ + + + + + EM
Sbjct: 1950 TSITDACLKAGRMQDAHAYLVEMRKEG-LVDAISYVALISTICKLGKGKLGFQLLR-EML 2007
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
E G P+ TFN + S + + A +++E+ + +H P
Sbjct: 2008 EKGFKPNLVTFNVVFEALSKESNTDDAKIMIQELRQ-QHSSP 2048
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 109/214 (50%), Gaps = 3/214 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G+ +S Y +++D L +V+ +Q + +L+ M G L T ++ RF+ AG + A
Sbjct: 1836 GHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMHENGCAFDLVTYNMLINRFAKAGMMDKA 1895
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHG 246
+ F E+ T G + T N ++D CK GKVE A +F E+K+ I PN T+
Sbjct: 1896 MDLFVEMPTRGCIPDVVTYNSIVDGFCKAGKVEEANKLFAEMKARGIFPNGRTYTSITDA 1955
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
K R+ +A + EM+ G ISY +I + C+ ++LL EM +G PN
Sbjct: 1956 CLKAGRMQDAHAYLVEMRKEGLVD-AISYVALISTICKLGKGKLGFQLLREMLEKGFKPN 2014
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
+VT+ V L+K + ++A + ++++ S P
Sbjct: 2015 LVTFNVVFEALSKESNTDDAKIMIQELRQQHSSP 2048
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 111/252 (44%), Gaps = 44/252 (17%)
Query: 266 HGCHPCVISYSTIIQSYCRQYNFSKVYELL-DEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
HG +++ +++ + + + +++L E + N TY+T++ + G+
Sbjct: 1655 HGYTHTAFAFNRLLEFLVNKRQYKRAHQMLIAESKPSSFQANAFTYSTIVRGYCEDGETR 1714
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTM 384
+A+ + E MK + E+P N +N +
Sbjct: 1715 QALALLEHMK-------------------------------KAEVPANA-----KLYNII 1738
Query: 385 ITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK 444
+T HG ++A +L M C P++ T++ L+ + K G+ ++ +Q L +M+
Sbjct: 1739 LTHLCKHGKEKEALDLLHSMATTS-CAPDIYTYNILINALCKVGRLED--AQGLVEMMQA 1795
Query: 445 HHLSLDITTYTLVIHGLCRAN----KCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKH 500
DI TY +IHGLCR + E A+ LF+EM+ TP T +++D + +
Sbjct: 1796 RECPTDIVTYNTLIHGLCRKGNGRFRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVK 1855
Query: 501 MYDAAEKIEAVM 512
M + A+K+ +M
Sbjct: 1856 MDEQAQKVLDLM 1867
>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
Length = 996
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 123/482 (25%), Positives = 214/482 (44%), Gaps = 74/482 (15%)
Query: 98 PSHYLVNKLIHRF--KDDWKSALGIFRWAGSC---PGYEHSSEIYEMMVDILGKVRQMDQ 152
PS + N LIH + D+ A + + G C PGY +Y +++ + ++
Sbjct: 367 PSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYV----VYNILIGGICGNEKLPS 422
Query: 153 MRAL-LEEMSKGHI----VTLN--TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTET 205
+ L L E + G + V LN ++ + R GAG++E A E+ + G +T T
Sbjct: 423 LDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTST 482
Query: 206 MNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
+ ++ LC KV+ A +F E+KS + P+ T+ I I +CK+ + +A+ EM
Sbjct: 483 YSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMV 542
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
GC P V++Y+ +I +Y + S EL + M ++GC PNVVTYT ++ KSG E
Sbjct: 543 RDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIE 602
Query: 325 EAIRITEKMK-------------------------------------------------- 334
+A +I +M+
Sbjct: 603 KACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVM 662
Query: 335 -IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
+ G +P+ ++ LI + ++ EA V+ +M E G P+ T++++I
Sbjct: 663 SVEGCEPNHIVYDALIDGFCKVGKLDEAQMVF-TKMSERGYGPNVYTYSSLIDRLFKDKR 721
Query: 394 HEKAFHVLEEMNKLEH-CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
+ A VL M LE+ C PNV + ++ K GKTDE + L M+ + ++
Sbjct: 722 LDLALKVLSRM--LENSCAPNVIIYTEMIDGLCKVGKTDE--AYRLMSMMEEKGCHPNVV 777
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
TYT +I G +A K + L ++M P + T R++++ + D A ++ M
Sbjct: 778 TYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEM 837
Query: 513 KK 514
K+
Sbjct: 838 KQ 839
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 164/367 (44%), Gaps = 40/367 (10%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL- 194
Y ++ K R+M L E M S+G I + T ++ +GQ E A + + +
Sbjct: 553 YTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMR 612
Query: 195 GTFGL---------------EKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNA 237
G + + N T L+D LCK KV+ AR + + ++ C PN
Sbjct: 613 GNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGC-EPNH 671
Query: 238 HTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDE 297
++ I G+CK+ ++DEAQ +M G P V +YS++I + ++L
Sbjct: 672 IVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSR 731
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
M C PNV+ YT ++ L K G +EA R+ M+ G P+ + +I G+A +
Sbjct: 732 MLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGK 791
Query: 358 VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTF 417
V + + + + +M G AP+ T+ +I G + A +L+EM QT+
Sbjct: 792 VDKCLELMR-QMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMK---------QTY 841
Query: 418 HPLLKSCFKTGKTDECLSQ-------LLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWA 470
P + ++ K E ++ LLD++ + + I Y ++I C+A + E A
Sbjct: 842 WPKHMAGYR--KVIEGFNREFIISLGLLDEIAENVAVPI-IPAYRILIDSFCKAGRLELA 898
Query: 471 YLLFKEM 477
L KEM
Sbjct: 899 LELHKEM 905
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 176/394 (44%), Gaps = 17/394 (4%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDA 187
GY+ S Y +V + + ++D + EMS G + T+ + AG+W +A
Sbjct: 227 GYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREA 286
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS--CIPPNAHTFNIFIH 245
+ ++ F L+ T ++ LC+ E A ++S CIP N T+ I +
Sbjct: 287 LALIEK-EEFKLD--TVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIP-NVVTYRILLC 342
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G + ++ + + M GC+P ++++I +YCR ++S Y+LL +M GC P
Sbjct: 343 GCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQP 402
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFF------NCLIYTLGRASRVQ 359
V Y ++ + + + K G D+ + L L A + +
Sbjct: 403 GYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFE 462
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
+A + + EM G PDTST++ +I + + + AF + EEM K H P+V T+
Sbjct: 463 KAYSIIR-EMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEM-KSNHVVPDVFTYTI 520
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
L+ S K G + + D+MV + + ++ TYT +IH +A K A LF+ M+
Sbjct: 521 LIDSFCKVGLLQQA-RKWFDEMV-RDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLS 578
Query: 480 HDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
P T ++D + + A +I A M+
Sbjct: 579 EGCIPNVVTYTALIDGHCKSGQIEKACQIYARMR 612
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 66/321 (20%), Positives = 133/321 (41%), Gaps = 25/321 (7%)
Query: 28 SSENC--SHIVSSSPIESYCSDGARLDHHQVLCVD------SPRLPDIDVIISKVHVGSS 79
S E C +HIV + I+ +C G +LD Q++ P + +I ++
Sbjct: 663 SVEGCEPNHIVYDALIDGFCKVG-KLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKR 721
Query: 80 EDEVFQSLKQDHVCNAIQPSHYLVNKLIHRF-----KDDWKSALGIFRWAGSCPGYEHSS 134
D + L + + N+ P+ + ++I D+ + + G P +
Sbjct: 722 LDLALKVLSR-MLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHP----NV 776
Query: 135 EIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDE 193
Y M+D GK ++D+ L+ +M +KG T ++ AG +DA + DE
Sbjct: 777 VTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDE 836
Query: 194 LGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIP-PNAHTFNIFIHGWCKINR 252
+ K+ +++ +E + L + E+ + P + I I +CK R
Sbjct: 837 MKQTYWPKHMAGYRKVIEGFNREFIISLG--LLDEIAENVAVPIIPAYRILIDSFCKAGR 894
Query: 253 VDEAQWTIQEMKGHGCHPCVIS--YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
++ A +EM + YS++I+S K +EL +M +G P + +
Sbjct: 895 LELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIF 954
Query: 311 TTVMSYLAKSGDFEEAIRITE 331
++ L + +EEA+++++
Sbjct: 955 FYLVKGLIRINRWEEALQLSD 975
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 182/360 (50%), Gaps = 11/360 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +M+ K +++ ++L+ MS +VT NTI +R +G+ + A+ D +
Sbjct: 175 YNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTI---LRSLCDSGKLKQAMEVLDRML 231
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK--SCIPPNAHTFNIFIHGWCKINRV 253
+ T +L++ C++ V A + E++ C P + T+N+ ++G CK R+
Sbjct: 232 QRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTP-DVVTYNVLVNGICKEGRL 290
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
DEA + +M GC P VI+++ I++S C + +LL +M +G P+VVT+ +
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL 350
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
+++L + G AI I EKM G +P+S +N L++ + ++ A+ Y M G
Sbjct: 351 INFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIE-YLERMVSRG 409
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
PD T+NTM+T G E A +L +++ + C P + T++ ++ K GKT +
Sbjct: 410 CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSS-KGCSPVLITYNTVIDGLAKAGKTGKA 468
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
+ +LLD+M K L D TY+ ++ GL R K + A F E + P T I+
Sbjct: 469 I-KLLDEMRAK-DLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIM 526
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 168/313 (53%), Gaps = 11/313 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKG---HIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++V+ + K ++D+ L +M S G +++T N I +R G+W DA +
Sbjct: 277 YNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNII---LRSMCSTGRWMDAEKLLA 333
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKIN 251
++ G + T N+L++ LC++G + A + ++ K PN+ ++N +HG+CK
Sbjct: 334 DMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEK 393
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
++D A ++ M GC+P +++Y+T++ + C+ E+L+++ ++GC P ++TY
Sbjct: 394 KMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYN 453
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
TV+ LAK+G +AI++ ++M+ KPD+ ++ L+ L R +V EA+ + E
Sbjct: 454 TVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFH-EFER 512
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
GV P+ TFN+++ ++A L M CKP ++ L++ G
Sbjct: 513 MGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMIN-RGCKPTETSYTILIEGLAYEGMAK 571
Query: 432 ECLSQLLDDMVNK 444
E L +LL+++ NK
Sbjct: 572 EAL-ELLNELCNK 583
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 166/346 (47%), Gaps = 6/346 (1%)
Query: 163 GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELA 222
G++ + ++R F G+ A + + L G + T N+++ CK G++ A
Sbjct: 132 GNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNA 191
Query: 223 RSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSY 282
SV + + P+ T+N + C ++ +A + M C+P VI+Y+ +I++
Sbjct: 192 LSVLDRMS--VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEAT 249
Query: 283 CRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDS 342
CR + +LLDEM+ +GC P+VVTY +++ + K G +EAI+ M G +P+
Sbjct: 250 CRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNV 309
Query: 343 RFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLE 402
N ++ ++ R +A + +M G +P TFN +I G +A +LE
Sbjct: 310 ITHNIILRSMCSTGRWMDAEKLL-ADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILE 368
Query: 403 EMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC 462
+M K C+PN +++PLL K K D + + L+ MV++ DI TY ++ LC
Sbjct: 369 KMPK-HGCQPNSLSYNPLLHGFCKEKKMDRAI-EYLERMVSRGCYP-DIVTYNTMLTALC 425
Query: 463 RANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+ K E A + ++ +P T ++D + + A K+
Sbjct: 426 KDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKL 471
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 137/281 (48%), Gaps = 8/281 (2%)
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYEL 294
P+ I G+C++ + +A ++ ++G G P VI+Y+ +I YC+ + +
Sbjct: 135 PDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSV 194
Query: 295 LDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGR 354
LD M P+VVTY T++ L SG ++A+ + ++M PD + LI R
Sbjct: 195 LDRMSVS---PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCR 251
Query: 355 ASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNV 414
S V +A+ + EM + G PD T+N ++ G ++A L +M C+PNV
Sbjct: 252 DSGVGQAMKLLD-EMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPS-SGCQPNV 309
Query: 415 QTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLF 474
T + +L+S TG+ + +LL DM+ K S + T+ ++I+ LCR A +
Sbjct: 310 ITHNIILRSMCSTGRWMDA-EKLLADMLRK-GFSPSVVTFNILINFLCRKGLLGRAIDIL 367
Query: 475 KEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEAVMKK 514
++M H P + +L K+K M A E +E ++ +
Sbjct: 368 EKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR 408
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 126/275 (45%), Gaps = 19/275 (6%)
Query: 41 IESYCSDGARLDHHQVLCVD------SPRLPDIDVIIS----KVHVGSSEDEVFQSLKQD 90
+ S CS G +D ++L D SP + +++I+ K +G + D + + + +
Sbjct: 316 LRSMCSTGRWMDAEKLL-ADMLRKGFSPSVVTFNILINFLCRKGLLGRAID-ILEKMPK- 372
Query: 91 HVCNAIQPSHYLVNKLIHRFKDDWKSALGI-FRWAGSCPGYEHSSEIYEMMVDILGKVRQ 149
H C QP+ N L+H F + K I + G Y M+ L K +
Sbjct: 373 HGC---QPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGK 429
Query: 150 MDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNL 208
++ +L ++S KG L T V+ + AG+ A++ DE+ L+ +T T +
Sbjct: 430 VEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSS 489
Query: 209 LLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG 267
L+ L +EGKV+ A F E + + PNA TFN + G CK + D A + M G
Sbjct: 490 LVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRG 549
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
C P SY+ +I+ + + ELL+E+ +G
Sbjct: 550 CKPTETSYTILIEGLAYEGMAKEALELLNELCNKG 584
>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 118/450 (26%), Positives = 213/450 (47%), Gaps = 44/450 (9%)
Query: 105 KLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGH 164
++I RF D L F ++ + H+ Y++++ L KV D + + + M
Sbjct: 81 EVIKRFSDPLL-GLKFFEFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDG 139
Query: 165 IVTLNTIAKVM-RRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELAR 223
I+ ++I +++ ++ G+ + A +E+ +G++ + N LL+ L K+ V+ A
Sbjct: 140 ILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAV 199
Query: 224 SVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSY 282
+F E L+ P+ ++FNI I G C+I +D+A Q M GC P ++SY+T+I +
Sbjct: 200 LLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGF 259
Query: 283 CRQYNFSKVYELLDE-MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPD 341
CR SK ++LL E M +G P+V+TYT+++S K GD + A + ++M G KP+
Sbjct: 260 CRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPN 319
Query: 342 SRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVL 401
FN LI G+ ++ A+ +Y+ +M G PD TF ++I + G + +
Sbjct: 320 DFTFNVLIDGFGKVGNMRSAMVMYE-KMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLW 378
Query: 402 EEMNKLEHCKPNVQTF-----------------------------------HPLLKSCFK 426
EEM K+ + PNV T+ +P++ K
Sbjct: 379 EEM-KVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCK 437
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
GK DE + + + + D T+T++I G C + A F +MI + P
Sbjct: 438 AGKVDE--ANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDE 495
Query: 487 QTCRLILDEVKQKHMYDAAEKI-EAVMKKL 515
T ++ + + M + A +I +A ++KL
Sbjct: 496 ITINSLISCLLKAGMPNEASQIKQAALQKL 525
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 181/396 (45%), Gaps = 17/396 (4%)
Query: 64 LPD---IDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSAL 118
LPD +++++S D L + H C I+ S ++ N L++ ++ A+
Sbjct: 141 LPDSSILELLVSSYARMGKLDSAKNFLNEVH-CYGIKVSPFVYNNLLNMLVKQNLVDEAV 199
Query: 119 GIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK----GHIVTLNTIAKV 174
+FR P + + +++ L ++ ++D+ + M IV+ NT+
Sbjct: 200 LLFREHLE-PYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLING 258
Query: 175 MRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCI 233
R + + D ++ +++ G+ + T ++ CK G ++ A +F E+ S I
Sbjct: 259 FCRVNEISKGHDLLK--EDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGI 316
Query: 234 PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
PN TFN+ I G+ K+ + A ++M GC P V++++++I YCR+ ++ +
Sbjct: 317 KPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLK 376
Query: 294 LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLG 353
L +EM+ + PNV TY +++ L K EA +K P +N +I
Sbjct: 377 LWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFC 436
Query: 354 RASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPN 413
+A +V EA ++ EM E PD TF +I G +A +M ++ +C P+
Sbjct: 437 KAGKVDEANFIV-AEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEI-NCVPD 494
Query: 414 VQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSL 449
T + L+ K G +E SQ+ + K +L L
Sbjct: 495 EITINSLISCLLKAGMPNEA-SQIKQAALQKLNLGL 529
>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
Length = 628
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 112/409 (27%), Positives = 188/409 (45%), Gaps = 27/409 (6%)
Query: 120 IFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRF 178
+F W G GY+HS Y +D L K ++M + G+ T + V+R
Sbjct: 24 LFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGL 83
Query: 179 SGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS---CIPP 235
AG+ + A +L G++ N T ++++D CK +V+ A +F + + C+P
Sbjct: 84 CKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVP- 142
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
+ TFN + G C R+ EA + M GC P VISYST++ C+ + L
Sbjct: 143 DVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLW 202
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFF---------- 345
+EM + C P++V YT+ ++ L K+ EA KM GSK D+ F
Sbjct: 203 EEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKK 262
Query: 346 -------NCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
N +I L R+ + EA ++ EM P FNT+I
Sbjct: 263 GHAEEAQNQMIEHLCRSGMLDEACKTFE-EMISRNHPPSAELFNTLIHAVCKSKRLPDGV 321
Query: 399 HVLEEMNKLE--HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTL 456
+ + M ++ +C PN++T++ ++ + K + DE +L+++M N + LS D+ TY+
Sbjct: 322 LLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEA-QELVNEMAN-YGLSPDVVTYSA 379
Query: 457 VIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
++ GLC+ K + A L +EM + P T IL+ + + D A
Sbjct: 380 LVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYA 428
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 146/301 (48%), Gaps = 11/301 (3%)
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC----IPPN 236
+G ++A +TF+E+ + + E N L+ +CK ++ +F +KS PPN
Sbjct: 279 SGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPN 338
Query: 237 AHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLD 296
T+NI + CK ++DEAQ + EM +G P V++YS ++ C+ + +LL+
Sbjct: 339 LETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLE 398
Query: 297 EMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRAS 356
EM +G P+ T ++++ L+K+G + A+ E MK GS PD +N L+ L +A
Sbjct: 399 EMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAG 458
Query: 357 RVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQT 416
R+ EA+ + +M PD ++ +IT G A + +EM K P+
Sbjct: 459 RIDEAI-TFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVK-RGVLPDTVL 516
Query: 417 FHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKE 476
+H LL + G D L L + D + +V+ GLC+A K E A + +
Sbjct: 517 YHSLLDGLARNGLEDLALELLKTSLCKP-----DFVMHKMVVDGLCKAGKAEDACEVVER 571
Query: 477 M 477
M
Sbjct: 572 M 572
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 109/456 (23%), Positives = 197/456 (43%), Gaps = 74/456 (16%)
Query: 112 DDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKG-----HIV 166
D K LG R +G + + Y +++D K ++D + + MS G +V
Sbjct: 90 DKAKELLGQLRESG----VKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVV 145
Query: 167 TLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF 226
T N++ ++ + +A F+ + G E N + + LLD LCK G+++ A ++
Sbjct: 146 TFNSL---LKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLW 202
Query: 227 LEL--KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII----- 279
E+ KSC+P + + F+ G CK NRV EA ++M G +++ST+I
Sbjct: 203 EEMVEKSCVP-DLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCK 261
Query: 280 ------------QSYCRQYNFSKVYELLDEMQAQG------------------------- 302
+ CR + + +EM ++
Sbjct: 262 KGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGV 321
Query: 303 -------------CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
CPPN+ TY ++ L K+ +EA + +M G PD ++ L+
Sbjct: 322 LLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALV 381
Query: 350 YTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH 409
L + ++ A + + EM + GV PD+ T +++ S G + A LE M K
Sbjct: 382 DGLCKLGKLDRACDLLE-EMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETM-KARG 439
Query: 410 CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEW 469
P++ T++ LL K G+ DE ++ L + K + D+ +YT++I LCR+ +
Sbjct: 440 STPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAK--CTPDVFSYTIIITALCRSGQAAG 497
Query: 470 AYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
A+ +F+EM+ + P +LD + + + D A
Sbjct: 498 AHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLA 533
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 148/348 (42%), Gaps = 56/348 (16%)
Query: 67 IDVIISKVHVGSSEDEVFQSLKQ----DHVCNAIQ--------PSHYLVNKLIHRFKDDW 114
I ++ K H +++++ + L + D C + PS L N LIH
Sbjct: 256 IGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSK 315
Query: 115 KSALGI--FRWAGS-----CPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIV 166
+ G+ F+ S CP + E Y +MVD L K +Q+D+ + L+ EM+ G
Sbjct: 316 RLPDGVLLFQRMKSMKEFYCP---PNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSP 372
Query: 167 TLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF 226
+ T + ++ G+ + A +E+ G+ ++ T +L+ L K GKV+ A S
Sbjct: 373 DVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHL 432
Query: 227 LELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQ 285
+K+ P+ T+N + G CK R+DEA + +M C P V SY+ II + CR
Sbjct: 433 ETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRS 492
Query: 286 YNFSKVYELLDEMQAQG--------------------------------CPPNVVTYTTV 313
+ + + EM +G C P+ V + V
Sbjct: 493 GQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCKPDFVMHKMV 552
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
+ L K+G E+A + E+M G D+ + ++ L + +V +A
Sbjct: 553 VDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGKVDKA 600
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 94/229 (41%), Gaps = 34/229 (14%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +VD L K+ ++D+ LLEEMSK G T A ++ S AG+ + A+ + +
Sbjct: 377 YSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMK 436
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVD 254
G + T N LLD LCK G+++ A + ++ + P+ ++ I I C+ +
Sbjct: 437 ARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAA 496
Query: 255 EAQWTIQEMKGHG--------------------------------CHPCVISYSTIIQSY 282
A QEM G C P + + ++
Sbjct: 497 GAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCKPDFVMHKMVVDGL 556
Query: 283 CRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
C+ E+++ M G P + TY V+ L K G ++A ++ +
Sbjct: 557 CKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGKVDKARQLVD 605
>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
Length = 1010
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 123/482 (25%), Positives = 214/482 (44%), Gaps = 74/482 (15%)
Query: 98 PSHYLVNKLIHRF--KDDWKSALGIFRWAGSC---PGYEHSSEIYEMMVDILGKVRQMDQ 152
PS + N LIH + D+ A + + G C PGY +Y +++ + ++
Sbjct: 367 PSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYV----VYNILIGGICGNEKLPS 422
Query: 153 MRAL-LEEMSKGHI----VTLN--TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTET 205
+ L L E + G + V LN ++ + R GAG++E A E+ + G +T T
Sbjct: 423 LDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTST 482
Query: 206 MNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
+ ++ LC KV+ A +F E+KS + P+ T+ I I +CK+ + +A+ EM
Sbjct: 483 YSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMV 542
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
GC P V++Y+ +I +Y + S EL + M ++GC PNVVTYT ++ KSG E
Sbjct: 543 RDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIE 602
Query: 325 EAIRITEKMK-------------------------------------------------- 334
+A +I +M+
Sbjct: 603 KACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVM 662
Query: 335 -IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
+ G +P+ ++ LI + ++ EA V+ +M E G P+ T++++I
Sbjct: 663 SVEGCEPNHIVYDALIDGFCKVGKLDEAQMVF-TKMSERGYGPNVYTYSSLIDRLFKDKR 721
Query: 394 HEKAFHVLEEMNKLEH-CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
+ A VL M LE+ C PNV + ++ K GKTDE + L M+ + ++
Sbjct: 722 LDLALKVLSRM--LENSCAPNVIIYTEMIDGLCKVGKTDE--AYRLMSMMEEKGCHPNVV 777
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
TYT +I G +A K + L ++M P + T R++++ + D A ++ M
Sbjct: 778 TYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEM 837
Query: 513 KK 514
K+
Sbjct: 838 KQ 839
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 163/367 (44%), Gaps = 40/367 (10%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL- 194
Y ++ K R+M L E M S+G I + T ++ +GQ E A + + +
Sbjct: 553 YTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMR 612
Query: 195 GTFGL---------------EKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNA 237
G + + N T L+D LCK KV+ AR + + ++ C PN
Sbjct: 613 GNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGC-EPNH 671
Query: 238 HTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDE 297
++ I G+CK+ ++DEAQ +M G P V +YS++I + ++L
Sbjct: 672 IVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSR 731
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
M C PNV+ YT ++ L K G +EA R+ M+ G P+ + +I G+A +
Sbjct: 732 MLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGK 791
Query: 358 VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTF 417
V + + + + +M G AP+ T+ +I G + A +L+EM QT+
Sbjct: 792 VDKCLELMR-QMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMK---------QTY 841
Query: 418 HPLLKSCFKTGKTDECLSQ-------LLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWA 470
P + ++ K E ++ LLD++ + + I Y ++I C+A + E A
Sbjct: 842 WPKHMAGYR--KVIEGFNREFIISLGLLDEIAENVAVPI-IPAYRILIDSFCKAGRLELA 898
Query: 471 YLLFKEM 477
L K M
Sbjct: 899 LELHKXM 905
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 175/394 (44%), Gaps = 17/394 (4%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDA 187
GY+ S Y +V + + ++D + EMS G + T+ + AG+W +A
Sbjct: 227 GYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREA 286
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS--CIPPNAHTFNIFIH 245
+ E F L+ T ++ LC+ E A ++S CIP N T+ I +
Sbjct: 287 L-ALIEKEEFKLD--TVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIP-NVVTYRILLC 342
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G + ++ + + M GC+P ++++I +YCR ++S Y+LL +M GC P
Sbjct: 343 GCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQP 402
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFF------NCLIYTLGRASRVQ 359
V Y ++ + + + K G D+ + L L A + +
Sbjct: 403 GYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFE 462
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
+A + + EM G PDTST++ +I + + + AF + EEM K H P+V T+
Sbjct: 463 KAYSIIR-EMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEM-KSNHVVPDVFTYTI 520
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
L+ S K G + + D+MV + + ++ TYT +IH +A K A LF+ M+
Sbjct: 521 LIDSFCKVGLLQQA-RKWFDEMV-RDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLS 578
Query: 480 HDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
P T ++D + + A +I A M+
Sbjct: 579 EGCIPNVVTYTALIDGHCKSGQIEKACQIYARMR 612
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 123/310 (39%), Gaps = 29/310 (9%)
Query: 28 SSENC--SHIVSSSPIESYCSDGARLDHHQVLCVD------SPRLPDIDVIISKVHVGSS 79
S E C +HIV + I+ +C G +LD Q++ P + +I ++
Sbjct: 663 SVEGCEPNHIVYDALIDGFCKVG-KLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKR 721
Query: 80 EDEVFQSLKQDHVCNAIQPSHYLVNKLIHRF-----KDDWKSALGIFRWAGSCPGYEHSS 134
D + L + + N+ P+ + ++I D+ + + G P +
Sbjct: 722 LDLALKVLSR-MLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHP----NV 776
Query: 135 EIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDE 193
Y M+D GK ++D+ L+ +M +KG T ++ AG +DA + DE
Sbjct: 777 VTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDE 836
Query: 194 LGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIP-PNAHTFNIFIHGWCKINR 252
+ K+ +++ +E + L + E+ + P + I I +CK R
Sbjct: 837 MKQTYWPKHMAGYRKVIEGFNREFIISLG--LLDEIAENVAVPIIPAYRILIDSFCKAGR 894
Query: 253 VDEAQWTIQEMKGHGCHPCVIS--YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
++ A + M + YS++I+S K +EL +M +G P +
Sbjct: 895 LELALELHKXMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPEL--- 951
Query: 311 TTVMSYLAKS 320
++ YL K
Sbjct: 952 -SIFFYLVKG 960
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 180/353 (50%), Gaps = 9/353 (2%)
Query: 164 HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELAR 223
++ +LN + + R + + AV ++ G+ T N L++ LC EGK++ A
Sbjct: 122 NVYSLNVLINCLCRLN---HVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAV 178
Query: 224 SVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSY 282
+F E+ + PN ++N I+G CK A ++M+ +GC P V++Y+TII S
Sbjct: 179 ELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSL 238
Query: 283 CRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDS 342
C+ + E L EM +G PPNV TY ++ G EA R+ ++M PD+
Sbjct: 239 CKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDT 298
Query: 343 RFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLE 402
L+ L + V EA V++ M E GV P+ ST+N ++ + +A V E
Sbjct: 299 VTLTILVDGLCKEGMVSEARLVFET-MTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFE 357
Query: 403 EMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC 462
M + + C P V +++ L+ K+ + DE S LL +M +K L+ D TY+ ++ GLC
Sbjct: 358 IMIR-QGCAPGVHSYNILINGFCKSRRMDEAKS-LLAEMYHKA-LNPDTVTYSTLMQGLC 414
Query: 463 RANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEAVMKK 514
+ + + A +FKEM + + P T ++LD K H+ +A + ++++ +K
Sbjct: 415 QFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEK 467
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 181/382 (47%), Gaps = 12/382 (3%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGH---IVTLNTIAKVMRRFSGAGQW 184
G ++ + +++ L ++ + L EM +GH +++ NTI + + G
Sbjct: 153 GIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCK---TGNT 209
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIF 243
AV F ++ G + + T N ++D+LCK+ V A E L IPPN T+N
Sbjct: 210 SMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCM 269
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
+HG+C + +++EA +EM G P ++ + ++ C++ S+ + + M +G
Sbjct: 270 VHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGV 329
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
PN+ TY +M EA ++ E M G P +N LI ++ R+ EA
Sbjct: 330 EPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKS 389
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
+ EM + PDT T++T++ G ++A ++ +EM PN+ T+ LL
Sbjct: 390 LL-AEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSY-GLLPNLVTYSILLDG 447
Query: 424 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
K G DE L +LL M K L +I +T++I G+ A K E A LF ++ I
Sbjct: 448 FCKHGHLDEAL-KLLKSMQEK-KLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIR 505
Query: 484 PRYQTCRLILDEVKQKHMYDAA 505
P +T +++ + ++ + D A
Sbjct: 506 PTIRTYTVMIKGLLKEGLSDEA 527
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 164/353 (46%), Gaps = 47/353 (13%)
Query: 137 YEMMVDILGKVRQM-DQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++D L K R + D M L E + +G + T ++ F GQ +A R F E+
Sbjct: 231 YNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMV 290
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
+ +T T+ +L+D LCKEG V AR VF + + + PN T+N + G+C ++
Sbjct: 291 GRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMN 350
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA+ + M GC P V SY+ +I +C+ + LL EM + P+ VTY+T+M
Sbjct: 351 EAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLM 410
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
L + G R +EA+ +++ EM G+
Sbjct: 411 QGLCQFG-----------------------------------RPKEALNIFK-EMCSYGL 434
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD--- 431
P+ T++ ++ F HGH ++A +L+ M + + +PN+ L++ F GK +
Sbjct: 435 LPNLVTYSILLDGFCKHGHLDEALKLLKSMQE-KKLEPNIVHHTILIEGMFIAGKLEVAK 493
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
E S+L D + I TYT++I GL + + AY LF++M P
Sbjct: 494 ELFSKLFADGIRP-----TIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLP 541
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 128/260 (49%), Gaps = 4/260 (1%)
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
+D+A + M P V + + S+ ++ +S V L ++M G NV +
Sbjct: 69 IDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNV 128
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN 372
+++ L + + A+ I KM +G P + FN LI L +++EAV ++ EM
Sbjct: 129 LINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFN-EMVRR 187
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
G P+ ++NT+I G+ A V ++M + CKP+V T++ ++ S K ++
Sbjct: 188 GHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQ-NGCKPDVVTYNTIIDSLCKDRLVND 246
Query: 433 CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLI 492
+ + L +M+++ + ++ TY ++HG C + A LFKEM+G D+ P T ++
Sbjct: 247 AM-EFLSEMLDR-GIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTIL 304
Query: 493 LDEVKQKHMYDAAEKIEAVM 512
+D + ++ M A + M
Sbjct: 305 VDGLCKEGMVSEARLVFETM 324
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 185/364 (50%), Gaps = 13/364 (3%)
Query: 158 EEMSKGH---IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLC 214
E + GH +++ NT+ + +G AV F ++ G + N T N ++D+LC
Sbjct: 188 EMVRSGHEPDVISYNTL---INGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLC 244
Query: 215 KEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI 273
K+ V A E+ IPP+A T+N +HG C + +++EA + M+ +GC P V+
Sbjct: 245 KDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVV 304
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
+Y+ II S + + + L EM QG PP+VVTYTT++ L G EAIR+ +KM
Sbjct: 305 TYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKM 364
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
+ G KPD +N +I +L + V +A+ + EM + G+ P+ T++T++ F + G
Sbjct: 365 EQKGCKPDVVAYNTIIDSLCKDRLVNDAME-FLSEMVDRGIPPNAVTYSTILHGFCNLGQ 423
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
++A + +EM + PN TF L+ + G E ++ + + + + + +I T
Sbjct: 424 LDEATQLFKEMVG-RNVMPNTLTFSILVDGLCQEGMVSE--ARWVFETMTEKGVEPNIYT 480
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM- 512
Y +++G C K A +F+ M+G P + ++++ D A+ + M
Sbjct: 481 YNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMS 540
Query: 513 -KKL 515
KKL
Sbjct: 541 VKKL 544
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 186/380 (48%), Gaps = 6/380 (1%)
Query: 137 YEMMVDILGKVRQM-DQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++D L K R + D M L E + +G T ++ GQ +A R F +
Sbjct: 236 YNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRME 295
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
G + + T N+++D+L K+ V A E+ IPP+ T+ +HG C + +++
Sbjct: 296 QNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLN 355
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA ++M+ GC P V++Y+TII S C+ + E L EM +G PPN VTY+T++
Sbjct: 356 EAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTIL 415
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
G +EA ++ ++M P++ F+ L+ L + V EA +V++ M E GV
Sbjct: 416 HGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFET-MTEKGV 474
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
P+ T+N ++ + +A V E M + C P++ +++ L+ + + D+
Sbjct: 475 EPNIYTYNALMNGYCLRCKMNEARKVFEIMVG-KGCAPDLHSYNILINGYCNSRRMDKAK 533
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
+ L V K L+ + TY ++ GLC + A LFK+M + P T ++L+
Sbjct: 534 ALLTQMSVKK--LTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLN 591
Query: 495 EVKQKHMYDAAEKIEAVMKK 514
+ + D A K+ MK+
Sbjct: 592 GLCKHGHLDEALKLFKSMKE 611
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 177/377 (46%), Gaps = 40/377 (10%)
Query: 172 AKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-K 230
K + + Q+ V +++ FG+ ++N+L++ LC+ V+ A SV+ ++ K
Sbjct: 97 GKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRLNHVDFAVSVWGKMFK 156
Query: 231 SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSK 290
I P+ TF I+G C ++ A EM G P VISY+T+I C N +
Sbjct: 157 LGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNM 216
Query: 291 VYELLDEMQAQGCPPNVVTYTTVMSYLAKS------------------------------ 320
+ +M+ GC PNVVTY T++ L K
Sbjct: 217 AVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVH 276
Query: 321 -----GDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
G EA R+ ++M+ G KPD +N +I +L + V +A + EM + G+
Sbjct: 277 GLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAAD-FLSEMVDQGIP 335
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS 435
PD T+ T++ + G +A + ++M + + CKP+V ++ ++ S K ++ +
Sbjct: 336 PDVVTYTTILHGLCYLGQLNEAIRLFKKMEQ-KGCKPDVVAYNTIIDSLCKDRLVNDAM- 393
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE 495
+ L +MV++ + + TY+ ++HG C + + A LFKEM+G ++ P T +++D
Sbjct: 394 EFLSEMVDR-GIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDG 452
Query: 496 VKQKHMYDAAEKIEAVM 512
+ Q+ M A + M
Sbjct: 453 LCQEGMVSEARWVFETM 469
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 149/298 (50%), Gaps = 4/298 (1%)
Query: 137 YEMMVDILGKVRQM-DQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++D L K R + D M L E + +G T + ++ F GQ ++A + F E+
Sbjct: 376 YNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMV 435
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
+ NT T ++L+D LC+EG V AR VF + + + PN +T+N ++G+C +++
Sbjct: 436 GRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMN 495
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA+ + M G GC P + SY+ +I YC K LL +M + PN VTY T+M
Sbjct: 496 EARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIM 555
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
L G +A + +KM G P ++ L+ L + + EA+ +++ M E +
Sbjct: 556 KGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFK-SMKEKKL 614
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
PD + +I G E A + +++ + +P +T++ ++K K G +DE
Sbjct: 615 EPDIILYTILIEGMFIGGKLEVAKGLFSKLSA-DGIQPPGRTYNVMIKGLLKEGLSDE 671
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 142/332 (42%), Gaps = 39/332 (11%)
Query: 219 VELARSVFLELKSCIP-PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
V+ A + F + P P+ F F+ K+ + + +M G V S +
Sbjct: 74 VDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNI 133
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+I CR + + +M G P+V+T+TT+++ + G + A+ + +M G
Sbjct: 134 LINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSG 193
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKA 397
+PD +N LI L + AV+V++ +M +NG P+ T+NT+I A
Sbjct: 194 HEPDVISYNTLINGLCNSGNTNMAVHVFK-KMEQNGCKPNVVTYNTIIDSLCKDRLVNDA 252
Query: 398 FHVLEEM------------NKLEH----------------------CKPNVQTFHPLLKS 423
L EM N + H CKP+V T++ ++ S
Sbjct: 253 MDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDS 312
Query: 424 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
+K ++ + L +MV++ + D+ TYT ++HGLC + A LFK+M
Sbjct: 313 LYKDRLVNDA-ADFLSEMVDQ-GIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCK 370
Query: 484 PRYQTCRLILDEV-KQKHMYDAAEKIEAVMKK 514
P I+D + K + + DA E + ++ +
Sbjct: 371 PDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDR 402
>gi|242049112|ref|XP_002462300.1| hypothetical protein SORBIDRAFT_02g023500 [Sorghum bicolor]
gi|241925677|gb|EER98821.1| hypothetical protein SORBIDRAFT_02g023500 [Sorghum bicolor]
Length = 541
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 175/377 (46%), Gaps = 7/377 (1%)
Query: 117 ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMR 176
+L F +A + PG+ H E ++ L R +R+LL ++ + + + + + R
Sbjct: 97 SLRFFLFAAALPGFTHLPESLLILAGSLAGARLFPLLRSLLSDLPRPAL-SRDLFPLLFR 155
Query: 177 RFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPN 236
++ AG +DA+R F + FG ++ LL TL G VE A + F E +
Sbjct: 156 AYARAGLPDDAIRAFSSMERFGFLPTVADLHSLLFTLSHNGLVEHAEAFFRESPIQFDVS 215
Query: 237 AHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLD 296
A T+ I I GW + + ++AQ EM G P V +Y+ +I + CR + + E L
Sbjct: 216 AKTYTILISGWAVVAKPEKAQKLFDEMIERGVQPDVPAYNALIDALCRGGDVALAQEQLK 275
Query: 297 EMQ-AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
+MQ ++G P+ TY + S D A+R+ ++M+ P+ +N +I L
Sbjct: 276 DMQRSRGLAPDAATYGPFLRSACASKDARAALRVLDRMRARSLTPNVFTYNAVIRLLCEL 335
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQ 415
V EA + EM G PD ++NT++ KA ++ M++ C PN
Sbjct: 336 GEVDEAYNILN-EMATYGEKPDVWSYNTLLNTHCKLKEVNKALRLISRMDE-GLCLPNRH 393
Query: 416 TFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGL-CRANKCEWAYLLF 474
+++ +LK G+ D + ++ D M K TY ++IHGL C+ + E A F
Sbjct: 394 SYNMILKMLIAIGRVDRAI-EVWDGM-EKRGFHPGAATYAVMIHGLSCKKGRAEEACSYF 451
Query: 475 KEMIGHDITPRYQTCRL 491
M+ I P TC++
Sbjct: 452 LRMVDDGIPPYQATCQV 468
>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Glycine max]
Length = 746
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 105/419 (25%), Positives = 195/419 (46%), Gaps = 49/419 (11%)
Query: 81 DEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIF-----RWAGSCPGYEHSSE 135
+E+ +++ + ++ LVN L + D AL +F + + G E
Sbjct: 301 NELLAEMEKRKIRPSVVTFGILVNHLCKARRID--EALQVFDRLRGKGGSNWVGVEPDVV 358
Query: 136 IYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAK--VMRRFSGAGQWEDAVRTFDE 193
++ ++D L KV + + +LLEEM G+I NT+ ++ F AG ++ A F +
Sbjct: 359 LFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQ 418
Query: 194 LGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINR 252
+ G++ N T+N L+D LCK G+V A F E+K + NA T+ I +C +N
Sbjct: 419 MNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNN 478
Query: 253 VDEAQWTIQEMKGHGCHP------------CVIS-----------------------YST 277
++ A +EM GC P C+ Y+
Sbjct: 479 INRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNV 538
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+I +C++ +VYELL EM+ G P+ +TY T++SYL K+GDF A ++ EKM G
Sbjct: 539 LISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEG 598
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKA 397
+P + +I+ V E + ++ + V P+T +N +I + ++A
Sbjct: 599 LRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRA 658
Query: 398 FHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG---KTDECLSQLLDDMVNKHHLSLDITT 453
++E+M K++ +PN T++ +LK K E + +++++ ++++++ T
Sbjct: 659 ISLMEDM-KVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEVLT 716
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 118/460 (25%), Positives = 199/460 (43%), Gaps = 56/460 (12%)
Query: 95 AIQPSHYLVNKLIHRFKDDWKSALG------IFRWAGSCPGYEHSSEIYEMMVDILGKVR 148
+ P + + +L+ + D K+ + + R G+ ++ ++ LG+ R
Sbjct: 241 GVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNA-----LLTWLGRGR 295
Query: 149 QMDQMRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDEL----GT--FGLEK 201
+ +M LL EM K I ++ T ++ A + ++A++ FD L G+ G+E
Sbjct: 296 DIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEP 355
Query: 202 NTETMNLLLDTLCKEGKVELARSVFLELK--SCIPPNAHTFNIFIHGWCKINRVDEAQWT 259
+ N L+D LCK GK E S+ E+K + PN T+N I G+ K D A
Sbjct: 356 DVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHEL 415
Query: 260 IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK 319
++M G P VI+ +T++ C+ + E +EM+ +G N TYT ++S
Sbjct: 416 FRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCG 475
Query: 320 SGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA------------------ 361
+ A++ E+M G PD+ + LI L A R+ +A
Sbjct: 476 VNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSC 535
Query: 362 ----------------VYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMN 405
VY EM E GV PDT T+NT+I+ G A V+E+M
Sbjct: 536 YNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMI 595
Query: 406 KLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRAN 465
K E +P+V T+ ++ + DE + ++ +M + + + Y ++I LCR N
Sbjct: 596 K-EGLRPSVVTYGAIIHAYCSKKNVDEGM-KIFGEMCSTSKVPPNTVIYNILIDALCRNN 653
Query: 466 KCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
+ A L ++M + P T IL V+ K M A
Sbjct: 654 DVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKA 693
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 143/326 (43%), Gaps = 12/326 (3%)
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDE 255
G + + N LL L + ++ + E+ K I P+ TF I ++ CK R+DE
Sbjct: 275 LGGAVDAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDE 334
Query: 256 AQWTIQEMKGHG------CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP-PNVV 308
A ++G G P V+ ++T+I C+ LL+EM+ PN V
Sbjct: 335 ALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTV 394
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
TY ++ K+G+F+ A + +M G +P+ N L+ L + RV AV + E
Sbjct: 395 TYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFN-E 453
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M G+ + +T+ +I+ F + +A EEM C P+ ++ L+ G
Sbjct: 454 MKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLS-SGCSPDAVVYYSLISGLCIAG 512
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ ++ + ++ + SLD + Y ++I G C+ K E Y L EM + P T
Sbjct: 513 RMND--ASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTIT 570
Query: 489 CRLILDEVKQKHMYDAAEKIEAVMKK 514
++ + + + A K+ M K
Sbjct: 571 YNTLISYLGKTGDFATASKVMEKMIK 596
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 95/203 (46%), Gaps = 9/203 (4%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQW 184
G+ Y +++ K ++++++ LL EM K +T NT+ + + G +
Sbjct: 528 GFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGK---TGDF 584
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNI 242
A + +++ GL + T ++ C + V+ +F E+ S +PPN +NI
Sbjct: 585 ATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNI 644
Query: 243 FIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
I C+ N VD A +++MK P +Y+ I++ + K +EL+D M +
Sbjct: 645 LIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEA 704
Query: 303 CPPNVVTYTTVMSYLAKSGDFEE 325
C P+ +T + +L+ G+ E+
Sbjct: 705 CRPDYITMEVLTEWLSAVGEIEK 727
>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Vitis vinifera]
Length = 1045
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 123/482 (25%), Positives = 214/482 (44%), Gaps = 74/482 (15%)
Query: 98 PSHYLVNKLIHRF--KDDWKSALGIFRWAGSC---PGYEHSSEIYEMMVDILGKVRQMDQ 152
PS + N LIH + D+ A + + G C PGY +Y +++ + ++
Sbjct: 367 PSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYV----VYNILIGGICGNEKLPS 422
Query: 153 MRAL-LEEMSKGHI----VTLN--TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTET 205
+ L L E + G + V LN ++ + R GAG++E A E+ + G +T T
Sbjct: 423 LDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTST 482
Query: 206 MNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
+ ++ LC KV+ A +F E+KS + P+ T+ I I +CK+ + +A+ EM
Sbjct: 483 YSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMV 542
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
GC P V++Y+ +I +Y + S EL + M ++GC PNVVTYT ++ KSG E
Sbjct: 543 RDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIE 602
Query: 325 EAIRITEKMK-------------------------------------------------- 334
+A +I +M+
Sbjct: 603 KACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVM 662
Query: 335 -IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
+ G +P+ ++ LI + ++ EA V+ +M E G P+ T++++I
Sbjct: 663 SVEGCEPNHIVYDALIDGFCKVGKLDEAQMVF-TKMSERGYGPNVYTYSSLIDRLFKDKR 721
Query: 394 HEKAFHVLEEMNKLEH-CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
+ A VL M LE+ C PNV + ++ K GKTDE + L M+ + ++
Sbjct: 722 LDLALKVLSRM--LENSCAPNVIIYTEMIDGLCKVGKTDE--AYRLMSMMEEKGCHPNVV 777
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
TYT +I G +A K + L ++M P + T R++++ + D A ++ M
Sbjct: 778 TYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEM 837
Query: 513 KK 514
K+
Sbjct: 838 KQ 839
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 164/367 (44%), Gaps = 40/367 (10%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL- 194
Y ++ K R+M L E M S+G I + T ++ +GQ E A + + +
Sbjct: 553 YTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMR 612
Query: 195 GTFGL---------------EKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNA 237
G + + N T L+D LCK KV+ AR + + ++ C PN
Sbjct: 613 GNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGC-EPNH 671
Query: 238 HTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDE 297
++ I G+CK+ ++DEAQ +M G P V +YS++I + ++L
Sbjct: 672 IVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSR 731
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
M C PNV+ YT ++ L K G +EA R+ M+ G P+ + +I G+A +
Sbjct: 732 MLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGK 791
Query: 358 VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTF 417
V + + + + +M G AP+ T+ +I G + A +L+EM QT+
Sbjct: 792 VDKCLELMR-QMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMK---------QTY 841
Query: 418 HPLLKSCFKTGKTDECLSQ-------LLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWA 470
P + ++ K E ++ LLD++ + + I Y ++I C+A + E A
Sbjct: 842 WPKHMAGYR--KVIEGFNREFIISLGLLDEIAENVAVPI-IPAYRILIDSFCKAGRLELA 898
Query: 471 YLLFKEM 477
L KEM
Sbjct: 899 LELHKEM 905
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 175/394 (44%), Gaps = 17/394 (4%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDA 187
GY+ S Y +V + + ++D + EMS G + T+ + AG+W +A
Sbjct: 227 GYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREA 286
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS--CIPPNAHTFNIFIH 245
+ E F L+ T ++ LC+ E A ++S CIP N T+ I +
Sbjct: 287 LALI-EKEEFKLD--TVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIP-NVVTYRILLC 342
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G + ++ + + M GC+P ++++I +YCR ++S Y+LL +M GC P
Sbjct: 343 GCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQP 402
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFF------NCLIYTLGRASRVQ 359
V Y ++ + + + K G D+ + L L A + +
Sbjct: 403 GYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFE 462
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
+A + + EM G PDTST++ +I + + + AF + EEM K H P+V T+
Sbjct: 463 KAYSIIR-EMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEM-KSNHVVPDVFTYTI 520
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
L+ S K G + + D+MV + + ++ TYT +IH +A K A LF+ M+
Sbjct: 521 LIDSFCKVGLLQQA-RKWFDEMV-RDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLS 578
Query: 480 HDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
P T ++D + + A +I A M+
Sbjct: 579 EGCIPNVVTYTALIDGHCKSGQIEKACQIYARMR 612
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 79/387 (20%), Positives = 156/387 (40%), Gaps = 45/387 (11%)
Query: 28 SSENC--SHIVSSSPIESYCSDGARLDHHQVLCVD------SPRLPDIDVIISKVHVGSS 79
S E C +HIV + I+ +C G +LD Q++ P + +I ++
Sbjct: 663 SVEGCEPNHIVYDALIDGFCKVG-KLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKR 721
Query: 80 EDEVFQSLKQDHVCNAIQPSHYLVNKLIHRF-----KDDWKSALGIFRWAGSCPGYEHSS 134
D + L + + N+ P+ + ++I D+ + + G P +
Sbjct: 722 LDLALKVLSR-MLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHP----NV 776
Query: 135 EIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDE 193
Y M+D GK ++D+ L+ +M +KG T ++ AG +DA + DE
Sbjct: 777 VTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDE 836
Query: 194 LGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIP-PNAHTFNIFIHGWCKINR 252
+ K+ +++ +E + L + E+ + P + I I +CK R
Sbjct: 837 MKQTYWPKHMAGYRKVIEGFNREFIISLG--LLDEIAENVAVPIIPAYRILIDSFCKAGR 894
Query: 253 VDEAQWTIQEMKGHGCHPCVIS--YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
++ A +EM + YS++I+S K +EL +M +G P + +
Sbjct: 895 LELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIF 954
Query: 311 TTVMSYLAKSGDFEEAIRITE----------KMKIVGSKPDSRFFNCLI--------YTL 352
++ L + +EEA+++++ + +GS D F N + Y
Sbjct: 955 FYLVKGLIRINRWEEALQLSDCICQMMVDFVREGFLGSSHDYEFLNWTLCSTTWASYYLW 1014
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTS 379
G+++ AV ++E+ G P T+
Sbjct: 1015 GQSAATGHAVAEQKLEIA--GTRPVTT 1039
>gi|125564557|gb|EAZ09937.1| hypothetical protein OsI_32236 [Oryza sativa Indica Group]
Length = 544
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 168/346 (48%), Gaps = 6/346 (1%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
+Y M+D+L K R LL+EM + + ++ I ++RR+ A +A F +
Sbjct: 147 LYAAMIDLLAKHHHFPLARHLLDEMRERSVPISAQLILALIRRYVRAEMPSEASDLFRRM 206
Query: 195 GTFGL-EKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRV 253
+G + T+ LL L K+ A+++F KS P+ + +H WC+ R+
Sbjct: 207 EEYGAGAPDPATLASLLGALSKKRLASEAQAMFDSYKSVFTPDVVLYTTLVHAWCRSGRL 266
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
DEA+ EM+ G P V +Y+ +I + R + ELL +M GCPPN T+ +
Sbjct: 267 DEAERVFAEMQQAGVTPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTATFNAI 326
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYT-LGRASRVQEAVYVYQVEMPEN 372
M K+G E+ +++ +M+ +G +PD +N L+ T G+ +A M
Sbjct: 327 MRAHVKAGRSEQVLQVHNQMRQLGCEPDIITYNFLMETHCGKGQSNLDAAMKMLTRMIAK 386
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
G PD TFN M+ + G+ A + E M +L+ CKPNV T++ LL F K+ +
Sbjct: 387 GCIPDCHTFNPMLKLVLVLGNVNAARKLYERMQELQ-CKPNVVTYN-LLMRLFNLEKSMD 444
Query: 433 CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
+ ++ DM + + ++ TY +I C + A++ +EM+
Sbjct: 445 MVLRIKRDM-DAQGVEPNVNTYAALIEAFCGRGNWKRAHMTLREMV 489
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 135/271 (49%), Gaps = 5/271 (1%)
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHT 239
+G+ ++A R F E+ G+ N T ++D + + G+V A+ + ++ S PPN T
Sbjct: 263 SGRLDEAERVFAEMQQAGVTPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTAT 322
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCR--QYNFSKVYELLDE 297
FN + K R ++ +M+ GC P +I+Y+ +++++C Q N ++L
Sbjct: 323 FNAIMRAHVKAGRSEQVLQVHNQMRQLGCEPDIITYNFLMETHCGKGQSNLDAAMKMLTR 382
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
M A+GC P+ T+ ++ + G+ A ++ E+M+ + KP+ +N L+ L +
Sbjct: 383 MIAKGCIPDCHTFNPMLKLVLVLGNVNAARKLYERMQELQCKPNVVTYN-LLMRLFNLEK 441
Query: 358 VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTF 417
+ V + +M GV P+ +T+ +I F G+ ++A L EM + + KP +
Sbjct: 442 SMDMVLRIKRDMDAQGVEPNVNTYAALIEAFCGRGNWKRAHMTLREMVEEKALKPTKPVY 501
Query: 418 HPLLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
+L K G+ +L++ MV++ +S
Sbjct: 502 DMVLALLRKAGQLRRH-EELVEMMVDRGFIS 531
>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
Length = 764
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 184/350 (52%), Gaps = 7/350 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ L +V + D+M AL +M + G+ V ++ + ++R FS G+ + A+ DE+
Sbjct: 64 YTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMK 123
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVD 254
+ + + N+ +D K GKV++A F E+K+ + P+ T+ + CK NR+D
Sbjct: 124 SNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLD 183
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA ++M+ + PC +Y+T+I Y F + Y LL+ +A+GC P+VV Y ++
Sbjct: 184 EAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCIL 243
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
+ L K G ++A+RI E+MK + P+ +N +I L +A V EA + + M E G+
Sbjct: 244 TCLGKKGKTDKALRIFEEMK-RDAMPNLPTYNIIIGMLCKAGNV-EAAFKVRDAMKEAGL 301
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
P+ T N MI ++A + E M+ + C P+ TF L+ K G+ D+
Sbjct: 302 FPNVRTINIMIDRLCKAQKLDEACSIFEGMD-YKVCSPDGATFCSLIDGLGKQGRVDDAY 360
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
++ + M++ + ++ YT +I + ++ E + ++KEM+ +P
Sbjct: 361 -RIYERMLDADQIP-NVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSP 408
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 114/495 (23%), Positives = 216/495 (43%), Gaps = 51/495 (10%)
Query: 62 PRLPDIDVIISKVHVGSSEDEVFQ---SLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSAL 118
P LP ++II + + + F+ ++K+ + ++ + ++++L K D ++
Sbjct: 268 PNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSI 327
Query: 119 --GIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVM 175
G+ S G S ++D LGK ++D + E M I + ++
Sbjct: 328 FEGMDYKVCSPDGATFCS-----LIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLI 382
Query: 176 RRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIP 234
R F + ED + + E+ G + +N +D + K G+ E R++F E+K+
Sbjct: 383 RNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFL 442
Query: 235 PNAHTFNIFIH-----------------------------------GWCKINRVDEAQWT 259
P+ +++I IH G+CK +V++A
Sbjct: 443 PDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQL 502
Query: 260 IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK 319
++EMK G HP V++Y +++ + + Y L +E ++ G N V Y++++ K
Sbjct: 503 LEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGK 562
Query: 320 SGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTS 379
G +EA + E+M G P+ +NCL+ L +A + EA+ +Q M + P+
Sbjct: 563 VGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQ-SMKDLKCTPNQI 621
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLD 439
T+ +I KAF +EM K + KPN T+ ++ K+G + S L +
Sbjct: 622 TYCILINGLCKVRKFNKAFVFWQEMQK-QGLKPNTITYTAMISGLAKSGNVAQA-SSLFE 679
Query: 440 DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQK 499
+ D +Y +I GL AN+ AY LF+E + +TC +LD + +
Sbjct: 680 RFRASGGIP-DSASYNAMIEGLSIANRALDAYQLFEETRLKGCSIHTKTCVALLDALHKA 738
Query: 500 HMYDAAEKIEAVMKK 514
+ A + AV+++
Sbjct: 739 ECLEQAAIVGAVLRE 753
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 152/347 (43%), Gaps = 7/347 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVM-RRFSGAGQWEDAVRTFDELG 195
Y M+ +L K ++D+ + E+M + V M + AG++++A +
Sbjct: 169 YTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQR 228
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDE 255
G + N +L L K+GK + A +F E+K PN T+NI I CK V+
Sbjct: 229 AKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDAMPNLPTYNIIIGMLCKAGNVEA 288
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
A MK G P V + + +I C+ + + + M + C P+ T+ +++
Sbjct: 289 AFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLID 348
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
L K G ++A RI E+M P+ + LI + R ++ +Y+ EM +G +
Sbjct: 349 GLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYK-EMMRSGCS 407
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS 435
PD NT + G EK + EE+ K P+ +++ L+ S K G E
Sbjct: 408 PDLMLLNTYMDCVFKAGETEKGRALFEEI-KARGFLPDTRSYSILIHSLVKAGFARETYE 466
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM--IGH 480
L + LD Y VI G C++ K AY L +EM +GH
Sbjct: 467 --LYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGH 511
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 127/271 (46%), Gaps = 5/271 (1%)
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYEL 294
P + I ++ D +M+ G V +T+I+ + R+ L
Sbjct: 59 PAFSAYTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSL 118
Query: 295 LDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGR 354
LDEM++ ++V Y + K G + A + +MK G PD + ++ L +
Sbjct: 119 LDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCK 178
Query: 355 ASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNV 414
A+R+ EAV +++ +M +N P +NTMI + G ++A+ +LE + + C P+V
Sbjct: 179 ANRLDEAVEIFE-QMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLER-QRAKGCIPSV 236
Query: 415 QTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLF 474
++ +L K GKTD+ L ++ ++M K ++ TY ++I LC+A E A+ +
Sbjct: 237 VAYNCILTCLGKKGKTDKAL-RIFEEM--KRDAMPNLPTYNIIIGMLCKAGNVEAAFKVR 293
Query: 475 KEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
M + P +T +++D + + D A
Sbjct: 294 DAMKEAGLFPNVRTINIMIDRLCKAQKLDEA 324
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 114/394 (28%), Positives = 194/394 (49%), Gaps = 17/394 (4%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQW 184
G + + +Y ++++L + +M + + EM K +VT NT+ K + R A Q
Sbjct: 145 GIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCR---AHQV 201
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSV---FLELKSCIPPNAHTFN 241
AV +E+ + G+ + T L+ +EG ++ A V LE+ C P T N
Sbjct: 202 RTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEM-GCSPTKV-TVN 259
Query: 242 IFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ 301
+ I+G+CK+ RV++A IQ+ +G P I+Y+T + C+ + +++D M +
Sbjct: 260 VLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQE 319
Query: 302 GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
G P+V TY V++ L K+G EEA I +M G PD FN LI L +R++EA
Sbjct: 320 GHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEA 379
Query: 362 VYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLL 421
+ + + ++ G++PD TFN +I G + A + EEM K C P+ T++ L+
Sbjct: 380 LDLAR-QVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEM-KSSGCTPDEVTYNTLI 437
Query: 422 KSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHD 481
+ GK + L LL +M TY +I GLC+ + E A +F +M
Sbjct: 438 DNLCSLGKLGKALD-LLKEM-ESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQG 495
Query: 482 ITPRYQTCRLILDEV-KQKHMYDAAEKIEAVMKK 514
I+ T ++D + K K + DA + I ++ +
Sbjct: 496 ISRNAITFNTLIDGLCKDKRIDDANQLISQMISE 529
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 107/461 (23%), Positives = 215/461 (46%), Gaps = 14/461 (3%)
Query: 61 SPRLPDIDVIISKV-HVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDW--KSA 117
SP ++V+I+ +G ED + Q + N +P N ++ + A
Sbjct: 252 SPTKVTVNVLINGYCKLGRVEDAL--GYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHA 309
Query: 118 LGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMR 176
L + G++ Y ++V+ L K Q+++ + +L +M +G + + T ++
Sbjct: 310 LKVMDVMVQ-EGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIV 368
Query: 177 RFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPP 235
+ E+A+ ++ GL + T N+L++ LCK G +LA +F E+KS P
Sbjct: 369 ALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTP 428
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
+ T+N I C + ++ +A ++EM+ GC ++Y+TII C++ + E+
Sbjct: 429 DEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVF 488
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
D+M QG N +T+ T++ L K ++A ++ +M G +P++ +N ++ +
Sbjct: 489 DQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQ 548
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQ 415
+++A + Q M NG D T+ T+I G + A +L M +++ + +
Sbjct: 549 GDIKKAADILQT-MTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGM-RIKGMRATPK 606
Query: 416 TFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCR-ANKCEWAYLLF 474
++P+++S F+ T + ++ L +M D TY +V GLCR A+
Sbjct: 607 AYNPVIQSLFRRNNTRDAMN-LFREMTEVGEPP-DAFTYKIVFRGLCRGGGSIREAFDFL 664
Query: 475 KEMIGHDITPRYQTCRLILDEVKQKHMYDA-AEKIEAVMKK 514
EM+ P + + R++ + + M D IE +++K
Sbjct: 665 LEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIIEK 705
>gi|357159762|ref|XP_003578551.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Brachypodium distachyon]
Length = 534
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 176/370 (47%), Gaps = 10/370 (2%)
Query: 114 WKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIA 172
+ AL F + E+Y M+D+L K R LL+EM K I ++ I
Sbjct: 114 FPEALAFFNHVLPSLPTDSLPELYASMMDLLAKHHHFPLARHLLDEMRKRSIPISSQVIL 173
Query: 173 KVMRRFSGAG---QWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL 229
++RR+ AG + D R+ +E G G + + LL L K+ A+++F
Sbjct: 174 ALIRRYVRAGMSSEASDLFRSMEEYG--GGVPDPAVLASLLGALSKKRLASEAQALFDSY 231
Query: 230 KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFS 289
KS P+ + +H WC+ +D+A+ EM+ G P V +Y+ +I + R
Sbjct: 232 KSVFTPDVVLYTTLVHAWCRSGCLDKAEQVFAEMQQAGIMPNVYTYTAVIDAMYRAGQVP 291
Query: 290 KVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
+ ELL +M GCPPN T+ +M K+G E+ +++ +M+ +G PD +N L+
Sbjct: 292 RAQELLCQMIDSGCPPNTATFNAIMRAHVKAGRSEQVLQVHNQMRQLGCDPDIITYNFLM 351
Query: 350 YT-LGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
T G+ +A ++M G PD TFN M+ + G+ + A + E M +L+
Sbjct: 352 ETHCGKGQSNLDAAMKLLLKMIAKGCTPDCHTFNPMLKLVVVLGNVDAAHKLYERMQELQ 411
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
CKPNV T++ LL F K+ + + ++ DM + + ++ TY +I C +
Sbjct: 412 -CKPNVITYN-LLMKLFGKDKSMDMVLRIKKDM-DAQGVEPNVNTYGALIETFCGRGNWK 468
Query: 469 WAYLLFKEMI 478
AY +EM+
Sbjct: 469 RAYATLREML 478
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 164/354 (46%), Gaps = 8/354 (2%)
Query: 94 NAIQPSHYLVNKLIHRFKDDWKS--ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMD 151
+I S ++ LI R+ S A +FR G + ++ L K R
Sbjct: 163 RSIPISSQVILALIRRYVRAGMSSEASDLFRSMEEYGGGVPDPAVLASLLGALSKKRLAS 222
Query: 152 QMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLD 211
+ +AL + + ++ + +G + A + F E+ G+ N T ++D
Sbjct: 223 EAQALFDSYKSVFTPDVVLYTTLVHAWCRSGCLDKAEQVFAEMQQAGIMPNVYTYTAVID 282
Query: 212 TLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHP 270
+ + G+V A+ + ++ S PPN TFN + K R ++ +M+ GC P
Sbjct: 283 AMYRAGQVPRAQELLCQMIDSGCPPNTATFNAIMRAHVKAGRSEQVLQVHNQMRQLGCDP 342
Query: 271 CVISYSTIIQSYCR--QYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
+I+Y+ +++++C Q N +LL +M A+GC P+ T+ ++ + G+ + A +
Sbjct: 343 DIITYNFLMETHCGKGQSNLDAAMKLLLKMIAKGCTPDCHTFNPMLKLVVVLGNVDAAHK 402
Query: 329 ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF 388
+ E+M+ + KP+ +N L+ G+ + + V + +M GV P+ +T+ +I F
Sbjct: 403 LYERMQELQCKPNVITYNLLMKLFGK-DKSMDMVLRIKKDMDAQGVEPNVNTYGALIETF 461
Query: 389 SHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG--KTDECLSQLLDD 440
G+ ++A+ L EM +++ KP + +L K G + E L +L+ D
Sbjct: 462 CGRGNWKRAYATLREMLEVKSLKPKKPVYDMVLVLLRKAGQLRKHEELVELMAD 515
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 113/410 (27%), Positives = 183/410 (44%), Gaps = 45/410 (10%)
Query: 113 DWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTI- 171
D +++ +F+WAG+ GY H ++Y M++D LG + + ALL +M + IV ++
Sbjct: 90 DVPTSMELFQWAGTQKGYCHMFDVYYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLF 149
Query: 172 AKVMRRFSGAGQWEDAVRTF-DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK 230
+M+ + AG A R D G + E + N++LD L ++ +VF E+
Sbjct: 150 ILIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEML 209
Query: 231 S-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQS-------- 281
S I P +TF + + C +N VD A +++M HGC P I Y T+I +
Sbjct: 210 SKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVN 269
Query: 282 ---------------------------YCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
C+ + +L+D M +G PN TY +M
Sbjct: 270 EVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLM 329
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
L + G +EA + K+ P+ FN LI R+ EA V M G
Sbjct: 330 HGLCRMGKVDEARMLLNKV----PNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGC 385
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
PD T+NT+I G+ A ++ EM +++ C+PNV T+ L+ K G+ +E
Sbjct: 386 GPDIFTYNTLILGLCKKGYLVSARELMNEM-QIKGCEPNVITYTILIDRFCKEGRLEEA- 443
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
+LD+M K L+L+ Y +I LC+ K + A +F +M P
Sbjct: 444 RNVLDEMSGK-GLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKP 492
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 191/380 (50%), Gaps = 11/380 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAV 188
G+ +S Y +++ L ++ ++D+ R LL ++ ++V NT+ + + G+ ++A
Sbjct: 317 GFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTL---INGYVSRGRLDEAK 373
Query: 189 RTFDE-LGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIH 245
E + + G + T N L+ LCK+G + AR + +++K C PN T+ I I
Sbjct: 374 AVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGC-EPNVITYTILID 432
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
+CK R++EA+ + EM G G + Y+ +I + C+ + +M ++GC P
Sbjct: 433 RFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKP 492
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
++ T+ +++ L K FEEA+ + + M + G ++ +N LI+ R +QEA+ +
Sbjct: 493 DIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLV 552
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
+M G D T+N +I G+ EK + E+M + PN + + L+
Sbjct: 553 N-DMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMS-KGLNPNNISCNILINGLC 610
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
+TG L + L DM+++ L+ DI TY +I+GLC+ + + A LF ++ I P
Sbjct: 611 RTGNIQHAL-EFLRDMIHRG-LTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPD 668
Query: 486 YQTCRLILDEVKQKHMYDAA 505
T ++ ++ M+D A
Sbjct: 669 AITYNTLISWHCKEGMFDDA 688
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 166/324 (51%), Gaps = 7/324 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ L K + R L+ EM KG + T ++ RF G+ E+A DE+
Sbjct: 392 YNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMS 451
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRV 253
GL N N L+ LCK+ KV+ A ++F ++ K C P+ TFN I G CK+N+
Sbjct: 452 GKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGC-KPDIFTFNSLIFGLCKVNKF 510
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
+EA Q+M G I+Y+T+I ++ R+ + +L+++M +GCP + +TY +
Sbjct: 511 EEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGL 570
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
+ L ++G+ E+ + + E M G P++ N LI L R +Q A+ + +M G
Sbjct: 571 IKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLR-DMIHRG 629
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
+ PD T+N++I G ++A ++ +++ ++E P+ T++ L+ K G D+
Sbjct: 630 LTPDIVTYNSLINGLCKTGRAQEALNLFDKL-QVEGICPDAITYNTLISWHCKEGMFDDA 688
Query: 434 LSQLLDDMVNKHHLSLDITTYTLV 457
LL V+ + ++T Y LV
Sbjct: 689 -HLLLSRGVDSGFIPNEVTWYILV 711
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 150/303 (49%), Gaps = 6/303 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAK--VMRRFSGAGQWED 186
G E + Y +++D K ++++ R +L+EMS G + LN + ++ + +D
Sbjct: 419 GCEPNVITYTILIDRFCKEGRLEEARNVLDEMS-GKGLALNAVGYNCLISALCKDEKVQD 477
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIH 245
A+ F ++ + G + + T N L+ LCK K E A ++ + L + N T+N IH
Sbjct: 478 ALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIH 537
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
+ + + EA + +M GC I+Y+ +I++ CR N K L ++M ++G P
Sbjct: 538 AFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNP 597
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N ++ +++ L ++G+ + A+ M G PD +N LI L + R QEA+ ++
Sbjct: 598 NNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLF 657
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
++ G+ PD T+NT+I+ G + A H+L PN T++ L+ +
Sbjct: 658 D-KLQVEGICPDAITYNTLISWHCKEGMFDDA-HLLLSRGVDSGFIPNEVTWYILVSNFI 715
Query: 426 KTG 428
K G
Sbjct: 716 KEG 718
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 134/295 (45%), Gaps = 15/295 (5%)
Query: 41 IESYCSDGARLDHHQVLCVDSPRLPDIDVIISKVHVGS-SEDEVFQ---SLKQDHVCNAI 96
I+ +C +G + VL S + ++ + + + +DE Q ++ D
Sbjct: 431 IDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGC 490
Query: 97 QPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMR 154
+P + N LI + ++ ALG+++ G ++ Y ++ + M +
Sbjct: 491 KPDIFTFNSLIFGLCKVNKFEEALGLYQDM-LLEGVIANTITYNTLIHAFLRRGAMQEAL 549
Query: 155 ALLEEM-SKG---HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLL 210
L+ +M +G +T N + K + R AG E + F+++ + GL N + N+L+
Sbjct: 550 KLVNDMLFRGCPLDDITYNGLIKALCR---AGNIEKGLALFEDMMSKGLNPNNISCNILI 606
Query: 211 DTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCH 269
+ LC+ G ++ A ++ + P+ T+N I+G CK R EA +++ G
Sbjct: 607 NGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGIC 666
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
P I+Y+T+I +C++ F + LL G PN VT+ ++S K GD E
Sbjct: 667 PDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 721
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 174/346 (50%), Gaps = 8/346 (2%)
Query: 164 HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELAR 223
++ +LN + + R S + AV ++ G++ + T N L++ LC EGK++ A
Sbjct: 130 NVYSLNVLINCLCRLS---HVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAV 186
Query: 224 SVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSY 282
+F E+ S PN ++N I+G CK A ++M+ + P V++Y+TII S
Sbjct: 187 GLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSL 246
Query: 283 CRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDS 342
C+ ++ E L EM +G PP+VVTY T++ G EA R+ ++M PD+
Sbjct: 247 CKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDT 306
Query: 343 RFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLE 402
FN L+ L + V EA V + M E G P+ T+N ++ + H ++A VL
Sbjct: 307 VTFNILVDGLCKEGMVSEARCVSET-MTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLG 365
Query: 403 EMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC 462
M + C PN+ +++ L+ K+ + +E +LL +M K +L+ D TY+ ++ GLC
Sbjct: 366 IMIG-KGCAPNLSSYNILINGYCKSKRMNEA-KRLLSEMSEK-NLTPDTVTYSTLMQGLC 422
Query: 463 RANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+ + A LFKEM + P ++LD + D A K+
Sbjct: 423 QVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKL 468
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 180/363 (49%), Gaps = 12/363 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKG---HIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++D L K R +++ L EM +G +VT NTI + F GQ +A R F
Sbjct: 239 YNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTI---LHGFCSLGQLNEATRLFK 295
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKIN 251
E+ + +T T N+L+D LCKEG V AR V + + PNA+T+N + G+C N
Sbjct: 296 EMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHN 355
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
++DEA + M G GC P + SY+ +I YC+ ++ LL EM + P+ VTY+
Sbjct: 356 QMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYS 415
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
T+M L + G EA+ + ++M G PD ++ L+ + + EA+ + + EM E
Sbjct: 416 TLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLK-EMHE 474
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
+ P+ + +I G E A + +++ + +P++ T++ ++K K G +D
Sbjct: 475 RRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSA-DGIRPDIWTYNVMIKGLLKEGLSD 533
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRL 491
E + M + L D +Y ++I G + A L EM+G + T ++
Sbjct: 534 EAY-EFFRKMEDDGFLP-DSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQM 591
Query: 492 ILD 494
+LD
Sbjct: 592 LLD 594
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 178/379 (46%), Gaps = 6/379 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDA 187
G + + + +++ L ++ + L EM GH + + V+ G A
Sbjct: 161 GIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMA 220
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHG 246
VR F ++ + N T N ++D+LCK+ V A E+ IPP+ T+N +HG
Sbjct: 221 VRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHG 280
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
+C + +++EA +EM G P ++++ ++ C++ S+ + + M +G PN
Sbjct: 281 FCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPN 340
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
TY +M +EAI++ M G P+ +N LI ++ R+ EA +
Sbjct: 341 AYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLS 400
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
EM E + PDT T++T++ G +A ++ +EM P++ + LL K
Sbjct: 401 -EMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCS-SGLLPDLMAYSILLDGFCK 458
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
G DE L +LL +M ++ + +I YT++I G+ A K E A LF ++ I P
Sbjct: 459 HGHLDEAL-KLLKEM-HERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDI 516
Query: 487 QTCRLILDEVKQKHMYDAA 505
T +++ + ++ + D A
Sbjct: 517 WTYNVMIKGLLKEGLSDEA 535
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 129/260 (49%), Gaps = 4/260 (1%)
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
+D+A + M P V+ + + S ++ +S L ++M G NV +
Sbjct: 77 IDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNV 136
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN 372
+++ L + + A+ + KM +G +PD+ FN LI L +++EAV ++ EM +
Sbjct: 137 LINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFN-EMVWS 195
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
G P+ ++NT+I +G+ A V +M + KPNV T++ ++ S K +E
Sbjct: 196 GHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQ-NRGKPNVVTYNTIIDSLCKDRLVNE 254
Query: 433 CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLI 492
+ + L +MV++ + D+ TY ++HG C + A LFKEM+G ++ P T ++
Sbjct: 255 AV-EFLSEMVDR-GIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNIL 312
Query: 493 LDEVKQKHMYDAAEKIEAVM 512
+D + ++ M A + M
Sbjct: 313 VDGLCKEGMVSEARCVSETM 332
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 121/278 (43%), Gaps = 4/278 (1%)
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYEL 294
P+ F F+ K + A +M G V S + +I CR + +
Sbjct: 94 PSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSV 153
Query: 295 LDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGR 354
+ +M G P+ +T+ T+++ L G +EA+ + +M G +P+ +N +I L +
Sbjct: 154 MGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCK 213
Query: 355 ASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNV 414
AV V++ +M +N P+ T+NT+I +A L EM P+V
Sbjct: 214 NGNTIMAVRVFR-KMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVD-RGIPPDV 271
Query: 415 QTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLF 474
T++ +L G+ +E ++L +MV ++ + D T+ +++ GLC+ A +
Sbjct: 272 VTYNTILHGFCSLGQLNEA-TRLFKEMVGRNVMP-DTVTFNILVDGLCKEGMVSEARCVS 329
Query: 475 KEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
+ M P T ++D + D A K+ +M
Sbjct: 330 ETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIM 367
>gi|413939122|gb|AFW73673.1| hypothetical protein ZEAMMB73_530264 [Zea mays]
Length = 526
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 192/415 (46%), Gaps = 18/415 (4%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHS---SEIYEMMVDILGKVRQMDQMRALLE 158
L+ +++ R + K AL + A P + ++ S+ Y+ +VD LG+ RQ D ++
Sbjct: 83 LLVQILLRLRGASKLALSLLHAARLHPSFVNTQPRSDAYDAVVDALGRARQFDAAWRVVV 142
Query: 159 EMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTF-GLEKNTETMNLLLDTLCKEG 217
+ S + T A + RR+ AG A+R FD++ F E + LLDTLCK
Sbjct: 143 DASADGAASPRTFAVLARRYVAAGMTRQAIRAFDDMEAFVSREPDAAEFATLLDTLCKYK 202
Query: 218 KVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
++A VF + K PN ++I I+GWCK+NR D A+ +++M HG P +++Y+
Sbjct: 203 YPKVATEVFNKRKYKYGPNEKMYSILIYGWCKVNRSDMAKKFLKDMLVHGIEPNIVTYNI 262
Query: 278 IIQSYCR------QYNFSKVY----ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
++ CR Y F + +LL EM+ +G P+V +Y+ ++ +++ E +
Sbjct: 263 LLNGICRHASLHPDYRFDRTVHAAEDLLKEMRGRGIEPDVTSYSIILHVYSRAHKPELCL 322
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITM 387
+ MK G P + +I L R+++ + EM GV P +T+N +
Sbjct: 323 CMFRSMKERGICPTVATYTSVIKCLSSCGRLEDGEILLD-EMVAEGVCPSPATYNCFLKE 381
Query: 388 FSHHGHHEKAFHVLEEMNKLEH-CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHH 446
+ A + +M P++ T++ LL K + + + DM +
Sbjct: 382 YRGRKDVTAALELYNKMKAPGSLTAPDIHTYNILLGMFSKLNRHGTVM-DIWSDMC-EST 439
Query: 447 LSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHM 501
+ D+ +YTL+IH C + K A F EMI P+ T + + Q M
Sbjct: 440 VGPDLDSYTLLIHCFCDSQKWREACQFFMEMIEKGFLPQKITFETLYRGLIQADM 494
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 102/258 (39%), Gaps = 23/258 (8%)
Query: 101 YLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM 160
Y ++ +H +D K G G E Y +++ + + + + + M
Sbjct: 277 YRFDRTVHAAEDLLKEMRGR--------GIEPDVTSYSIILHVYSRAHKPELCLCMFRSM 328
Query: 161 S-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV 219
+G T+ T V++ S G+ ED DE+ G+ + T N L V
Sbjct: 329 KERGICPTVATYTSVIKCLSSCGRLEDGEILLDEMVAEGVCPSPATYNCFLKEYRGRKDV 388
Query: 220 ELARSVFLELK---SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYS 276
A ++ ++K S P+ HT+NI + + K+NR +M P + SY+
Sbjct: 389 TAALELYNKMKAPGSLTAPDIHTYNILLGMFSKLNRHGTVMDIWSDMCESTVGPDLDSYT 448
Query: 277 TIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF-----------EE 325
+I +C + + + EM +G P +T+ T+ L ++ EE
Sbjct: 449 LLIHCFCDSQKWREACQFFMEMIEKGFLPQKITFETLYRGLIQADMLRTWRRLKRRVDEE 508
Query: 326 AIRITEKMKIVGSKPDSR 343
A + ++ K+ KP R
Sbjct: 509 AAKFGDEFKLYHMKPYKR 526
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/289 (18%), Positives = 113/289 (39%), Gaps = 15/289 (5%)
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYEL 294
P + ++ + + + D A + + G +++ + + Y +
Sbjct: 116 PRSDAYDAVVDALGRARQFDAAWRVVVDASADGAA-SPRTFAVLARRYVAAGMTRQAIRA 174
Query: 295 LDEMQA-QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLG 353
D+M+A P+ + T++ L K + A + K K P+ + ++ LIY
Sbjct: 175 FDDMEAFVSREPDAAEFATLLDTLCKYKYPKVATEVFNKRK-YKYGPNEKMYSILIYGWC 233
Query: 354 RASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG------HHEKAFHVLEEMNKL 407
+ +R A + +M +G+ P+ T+N ++ H ++ H E++ K
Sbjct: 234 KVNRSDMAKKFLK-DMLVHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVHAAEDLLKE 292
Query: 408 EHCK---PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRA 464
+ P+V ++ +L + K + CL + + + + TYT VI L
Sbjct: 293 MRGRGIEPDVTSYSIILHVYSRAHKPELCLCMFRS--MKERGICPTVATYTSVIKCLSSC 350
Query: 465 NKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
+ E +L EM+ + P T L E + + AA ++ MK
Sbjct: 351 GRLEDGEILLDEMVAEGVCPSPATYNCFLKEYRGRKDVTAALELYNKMK 399
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 117/394 (29%), Positives = 192/394 (48%), Gaps = 17/394 (4%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQW 184
G + + +Y ++++L + +M + ++ EM K +VT NT+ K + R A Q
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCR---AHQV 197
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSV---FLELKSCIPPNAHTFN 241
AV +E+ + G+ + T L+ +EG +E A V LE+ C T N
Sbjct: 198 RTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEM-GCSATKV-TVN 255
Query: 242 IFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ 301
+ I+G+CK+ RV++A IQ+ G P I+Y+T + C+ + +++D M +
Sbjct: 256 VLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQE 315
Query: 302 GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
G P+V TY V++ L K+G EEA I +M G PD FN LI L +R++EA
Sbjct: 316 GHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEA 375
Query: 362 VYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLL 421
+ + + ++ GV+PD TFN +I G A + EEM K C P+ T++ L+
Sbjct: 376 LDLAR-QVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM-KNSGCTPDEVTYNTLI 433
Query: 422 KSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHD 481
+ GK + L LL DM TY +I GLC+ + E A +F +M
Sbjct: 434 DNLCSLGKLGKALD-LLKDM-ESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQG 491
Query: 482 ITPRYQTCRLILDEV-KQKHMYDAAEKIEAVMKK 514
I+ T ++D + K K + DA E I ++ +
Sbjct: 492 ISRNAITFNTLIDGLCKDKKIDDAFELINQMISE 525
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 190/391 (48%), Gaps = 8/391 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G++ Y ++V+ L K Q+++ + +L +M +G + + T ++ + E+A
Sbjct: 316 GHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEA 375
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHG 246
+ ++ G+ + T N+L++ LCK G LA +F E+K S P+ T+N I
Sbjct: 376 LDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDN 435
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C + ++ +A +++M+ GC I+Y+TII C++ + E+ D+M QG N
Sbjct: 436 LCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRN 495
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
+T+ T++ L K ++A + +M G +P++ +N ++ + +++A + +
Sbjct: 496 AITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILE 555
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
M NG D T+ T+I G + A VL M +++ +P + ++P+L+S F+
Sbjct: 556 T-MTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGM-RIKGMRPTPKAYNPVLQSLFR 613
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANK-CEWAYLLFKEMIGHDITPR 485
+ LS L +M D TY +V GLCR + A+ EM+ P
Sbjct: 614 RNNIRDALS-LFREMAEVGEPP-DALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPE 671
Query: 486 YQTCRLILDEVKQKHMYDA-AEKIEAVMKKL 515
+ + R++ + + M D IE +M+K+
Sbjct: 672 FSSFRMLAEGLLNLGMDDYFIRAIEIIMEKV 702
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 187/392 (47%), Gaps = 8/392 (2%)
Query: 109 RFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVT 167
R + D +AL + A + + E+YE ++ LG V +D M+ L+ EM + GH V
Sbjct: 49 REQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVK 108
Query: 168 LNTIAKVMRRFSGAGQWEDAVR-TFDELGT-FGLEKNTETMNLLLDTLCKEGKVELARSV 225
L + + + G ++DAV ++L FG++ +T N LL+ L + K++L SV
Sbjct: 109 LGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESV 168
Query: 226 FLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCR 284
+ E+ + I P+ TFN + C+ ++V A ++EM G P +++T++Q +
Sbjct: 169 YSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVE 228
Query: 285 QYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRF 344
+ + + M GC VT +++ K G E+A+ ++ G +PD
Sbjct: 229 EGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQIT 288
Query: 345 FNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
+N + L + V A+ V V M + G PD T+N ++ +G E+A +L +M
Sbjct: 289 YNTFVNGLCQNDHVGHALKVMDV-MVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 347
Query: 405 NKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRA 464
C P++ TF+ L+ + + +E L L V +S D+ T+ ++I+ LC+
Sbjct: 348 VD-RGCLPDITTFNTLIAALCTGNRLEEALD--LARQVTVKGVSPDVYTFNILINALCKV 404
Query: 465 NKCEWAYLLFKEMIGHDITPRYQTCRLILDEV 496
A LF+EM TP T ++D +
Sbjct: 405 GDPHLALRLFEEMKNSGCTPDEVTYNTLIDNL 436
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 190/399 (47%), Gaps = 7/399 (1%)
Query: 118 LGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMR 176
+ F+WAGS Y H + Y ++++L K + D + +M G + T ++R
Sbjct: 1 MAFFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLR 60
Query: 177 RFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPP 235
A ++E+A F + G N + ++L+ LC+ KV+ A + E+ P
Sbjct: 61 SLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQP 120
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
N T+ + G CK+ ++ EA M GC P + Y+ +I + ++ + + Y L
Sbjct: 121 NVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLF 180
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
+EM +GC P V TY +++S ++ G+F + + M G P+ FN L+ +
Sbjct: 181 EEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKM 240
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQ 415
+ EA ++ +EM G PD ++NT++ G +A +L EM + P++
Sbjct: 241 GDMVEAHRLF-LEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIR-SGVGPDIV 298
Query: 416 TFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFK 475
+++ L+ K+G D + + + K L D +Y+ +I LCRA K A+++FK
Sbjct: 299 SYNILIDGYSKSGALDHAIKLFYE--IPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFK 356
Query: 476 EMIGHDITPRYQTC-RLILDEVKQKHMYDAAEKIEAVMK 513
+MI + P L++ + + + ++ E +A++K
Sbjct: 357 DMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVK 395
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 182/374 (48%), Gaps = 10/374 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +++ L + +++D+ LL EM GH + T ++ G+ ++AV F +
Sbjct: 90 YSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMV 149
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRV 253
G + N+L+D K+G + A +F E+ K CIP T+N + G+ +
Sbjct: 150 YRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIP-TVFTYNSLLSGFSRKGEF 208
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
Q ++M GC P + +++ ++ +C+ + + + L EM++ GCPP+VV+Y T+
Sbjct: 209 GRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTL 268
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
M + G EA R+ +M G PD +N LI ++ + A+ ++ E+P++G
Sbjct: 269 MRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLF-YEIPKSG 327
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS-CFKTGKTDE 432
+ PD +++T+I G AF V ++M P+ PL+ C T+
Sbjct: 328 LEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIA-NGSAPDAAVVIPLVIGLCRGERLTES 386
Query: 433 CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLI 492
C +L MV + L I Y L+++ LC+A + + +F E+ +P + ++I
Sbjct: 387 C--ELFQAMVKFECVPL-IPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVI 443
Query: 493 LDEVKQKHMYDAAE 506
L+ +++ +AAE
Sbjct: 444 LETLRRSDDKEAAE 457
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 103/329 (31%), Positives = 166/329 (50%), Gaps = 5/329 (1%)
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIH 245
+V ++ G+ + T N L++ LC EGK++ A +F E+ K PN ++ I+
Sbjct: 147 SVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVIN 206
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G CK A ++M+ +GC P V++YSTII S C+ + E L EM +G PP
Sbjct: 207 GLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPP 266
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
NV TY +++ G EA R+ ++M P++ F L+ L + V EA V+
Sbjct: 267 NVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVF 326
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
+ M E GV PD ST+N ++ + +A V E M + + C P +++ L+
Sbjct: 327 ET-MTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIR-KGCAPGAHSYNILINGYC 384
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
K+ + DE S LL +M +K L+ D TY+ ++ GLC+ + + A LFKEM + P
Sbjct: 385 KSRRMDEAKS-LLAEMYHKA-LNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPN 442
Query: 486 YQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
T ++LD + D A K+ MK+
Sbjct: 443 LVTYVILLDGFCKHGHLDEALKLLKSMKE 471
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 176/367 (47%), Gaps = 17/367 (4%)
Query: 145 GKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNT 203
GK+++ + L EM K GH + + V+ G AV F ++ G + N
Sbjct: 177 GKIKEAVE---LFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNV 233
Query: 204 ETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQE 262
T + ++D+LCK+ V A E+ + IPPN T+N +HG+C + +++EA +E
Sbjct: 234 VTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKE 293
Query: 263 MKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGD 322
M G P ++++ ++ C++ S+ + + M +G P++ TY +M
Sbjct: 294 MVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRL 353
Query: 323 FEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFN 382
EA ++ E M G P + +N LI ++ R+ EA + EM + PDT T++
Sbjct: 354 MNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLL-AEMYHKALNPDTVTYS 412
Query: 383 TMITMFSHHGHHEKAFHVLEEMNKLEHCK----PNVQTFHPLLKSCFKTGKTDECLSQLL 438
T++ G ++A ++ +EM C PN+ T+ LL K G DE L +LL
Sbjct: 413 TLMQGLCQLGRPKEALNLFKEM-----CSYGPHPNLVTYVILLDGFCKHGHLDEAL-KLL 466
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQ 498
M K L +I YT++I G+ A K E A LF ++ G P +T +++ + +
Sbjct: 467 KSMKEK-KLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLK 525
Query: 499 KHMYDAA 505
+ + D A
Sbjct: 526 EGLSDEA 532
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 170/360 (47%), Gaps = 6/360 (1%)
Query: 137 YEMMVDILGKVRQM-DQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++D L K R + D M L E + +G + T ++ F GQ +A R F E+
Sbjct: 236 YSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMV 295
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
+ NT T +L+D LCKEG V AR VF + + + P+ T+N + G+C ++
Sbjct: 296 GRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMN 355
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA+ + M GC P SY+ +I YC+ + LL EM + P+ VTY+T+M
Sbjct: 356 EAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLM 415
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
L + G +EA+ + ++M G P+ + L+ + + EA+ + + M E +
Sbjct: 416 QGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLK-SMKEKKL 474
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
P+ + +I G E A + ++ + +P+++T+ ++K K G +DE
Sbjct: 475 EPNIVHYTILIEGMFIAGKLEVAKELFSKLFG-DGTRPDIRTYTVMIKGLLKEGLSDEAY 533
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
L M + L + +Y ++I G + A L EM+G + T +++LD
Sbjct: 534 -DLFRKMEDDGFLP-NSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLLD 591
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 127/260 (48%), Gaps = 4/260 (1%)
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
VD+A + M P V+ + + S+ ++ +S V L ++M NV +
Sbjct: 74 VDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNI 133
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN 372
+++ L + + ++ + KM +G PD+ FN LI L +++EAV ++ EM +
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFN-EMVKR 192
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
G P+ ++ T+I G+ A V ++M + CKPNV T+ ++ S K ++
Sbjct: 193 GHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQ-NGCKPNVVTYSTIIDSLCKDRLVND 251
Query: 433 CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLI 492
+ + L +MV + + ++ TY ++HG C + A LFKEM+G D+ P T ++
Sbjct: 252 AM-EFLSEMVER-GIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTIL 309
Query: 493 LDEVKQKHMYDAAEKIEAVM 512
+D + ++ M A + M
Sbjct: 310 VDGLCKEGMVSEARLVFETM 329
>gi|224117008|ref|XP_002317451.1| predicted protein [Populus trichocarpa]
gi|222860516|gb|EEE98063.1| predicted protein [Populus trichocarpa]
Length = 461
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 198/387 (51%), Gaps = 16/387 (4%)
Query: 107 IHRFKDDWKSALGIFRWAG----SCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK 162
+ R + D K AL +F+ S P + +S Y++++ LG+ + ++M+ +L ++ +
Sbjct: 15 LLRLQKDPKLALQLFKNPNPKTPSKP-FRYSLLSYDLIITKLGRAKMFNEMQEILAQLKE 73
Query: 163 GHIVTLN--TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDT--LCKEGK 218
+ T ++ + A E+A++ EL +F +++ ++ N LL +CK+
Sbjct: 74 ETLFTPKEALFCDIINFYGRARLPENALKLLVELPSFRVQRTVKSYNSLLSVFLMCKD-- 131
Query: 219 VELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTI 278
+ R +F+ ++ +A T+N+ I G+C R+D+A EM G P VI++ +
Sbjct: 132 FDKMRELFVGIEKLGKADACTYNLLIRGFCASGRLDDASKVFDEMTNRGVSPNVITFGNL 191
Query: 279 IQSYCRQYNFSKVYEL-LDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
I +C + ++L D ++ PN Y +++ + K+G+ A R+ ++M
Sbjct: 192 IYGFCLHLRLKEAFKLKTDMVKVYRVYPNAYIYASLIKGVCKNGELSLAFRLKKEMIRNK 251
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKA 397
+ D ++ LI L +A R +EA+ V++ +M E G PDT T+N +I +F E A
Sbjct: 252 IELDPAIYSTLISGLFKAGRKEEALGVWE-DMKERGYKPDTVTYNVIINLFCKDKDFEAA 310
Query: 398 FHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLV 457
+ +L+EM + + CKP+V +++ +L+ F+ GK E + L +DM + + D+ +Y ++
Sbjct: 311 YRLLDEMVE-KGCKPDVISYNVILRELFEEGKRGEA-NDLFEDM-PRRGCAPDVVSYRIL 367
Query: 458 IHGLCRANKCEWAYLLFKEMIGHDITP 484
G C + + A + EMI P
Sbjct: 368 FDGFCNGMQFKEAAFILDEMIFKGFVP 394
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/381 (23%), Positives = 159/381 (41%), Gaps = 50/381 (13%)
Query: 68 DVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSC 127
D+II+K+ +E+ + L Q P L +I+ F + +
Sbjct: 49 DLIITKLGRAKMFNEMQEILAQLKEETLFTPKEALFCDIIN-FYGRARLPENALKLLVEL 107
Query: 128 PGY--EHSSEIYEMMVDILGKVRQMDQMRAL---LEEMSKGHIVTLNTIAKVMRRFSGAG 182
P + + + + Y ++ + + D+MR L +E++ K T N + +R F +G
Sbjct: 108 PSFRVQRTVKSYNSLLSVFLMCKDFDKMRELFVGIEKLGKADACTYNLL---IRGFCASG 164
Query: 183 QWEDAVRTFDELGTFGLEKNTETM-NL--------------------------------- 208
+ +DA + FDE+ G+ N T NL
Sbjct: 165 RLDDASKVFDEMTNRGVSPNVITFGNLIYGFCLHLRLKEAFKLKTDMVKVYRVYPNAYIY 224
Query: 209 --LLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKG 265
L+ +CK G++ LA + E+ ++ I + ++ I G K R +EA ++MK
Sbjct: 225 ASLIKGVCKNGELSLAFRLKKEMIRNKIELDPAIYSTLISGLFKAGRKEEALGVWEDMKE 284
Query: 266 HGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEE 325
G P ++Y+ II +C+ +F Y LLDEM +GC P+V++Y ++ L + G E
Sbjct: 285 RGYKPDTVTYNVIINLFCKDKDFEAAYRLLDEMVEKGCKPDVISYNVILRELFEEGKRGE 344
Query: 326 AIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMI 385
A + E M G PD + L + +EA ++ EM G P +++ +
Sbjct: 345 ANDLFEDMPRRGCAPDVVSYRILFDGFCNGMQFKEAAFILD-EMIFKGFVPCSASICKFV 403
Query: 386 TMFSHHGHHE---KAFHVLEE 403
+ + AF+ LE+
Sbjct: 404 NRLCEGKNEDLLRSAFNTLEK 424
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 120/272 (44%), Gaps = 8/272 (2%)
Query: 227 LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQY 286
L+ ++ P F I+ + + + A + E+ V SY++++ +
Sbjct: 71 LKEETLFTPKEALFCDIINFYGRARLPENALKLLVELPSFRVQRTVKSYNSLLSVFLMCK 130
Query: 287 NFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFN 346
+F K+ EL ++ G + TY ++ SG ++A ++ ++M G P+ F
Sbjct: 131 DFDKMRELFVGIEKLG-KADACTYNLLIRGFCASGRLDDASKVFDEMTNRGVSPNVITFG 189
Query: 347 CLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM-- 404
LIY R++EA + + V P+ + ++I +G AF + +EM
Sbjct: 190 NLIYGFCLHLRLKEAFKLKTDMVKVYRVYPNAYIYASLIKGVCKNGELSLAFRLKKEMIR 249
Query: 405 NKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRA 464
NK+E + + L+ FK G+ +E L + +DM + + D TY ++I+ C+
Sbjct: 250 NKIEL---DPAIYSTLISGLFKAGRKEEALG-VWEDMKERGY-KPDTVTYNVIINLFCKD 304
Query: 465 NKCEWAYLLFKEMIGHDITPRYQTCRLILDEV 496
E AY L EM+ P + +IL E+
Sbjct: 305 KDFEAAYRLLDEMVEKGCKPDVISYNVILREL 336
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 117/394 (29%), Positives = 192/394 (48%), Gaps = 17/394 (4%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQW 184
G + + +Y ++++L + +M + ++ EM K +VT NT+ K + R A Q
Sbjct: 49 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCR---AHQV 105
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSV---FLELKSCIPPNAHTFN 241
AV +E+ + G+ + T L+ +EG +E A V LE+ C T N
Sbjct: 106 RTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEM-GCSATKV-TVN 163
Query: 242 IFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ 301
+ I+G+CK+ RV++A IQ+ G P I+Y+T + C+ + +++D M +
Sbjct: 164 VLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQE 223
Query: 302 GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
G P+V TY V++ L K+G EEA I +M G PD FN LI L +R++EA
Sbjct: 224 GHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEA 283
Query: 362 VYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLL 421
+ + + ++ GV+PD TFN +I G A + EEM K C P+ T++ L+
Sbjct: 284 LDLAR-QVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM-KNSGCTPDEVTYNTLI 341
Query: 422 KSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHD 481
+ GK + L LL DM TY +I GLC+ + E A +F +M
Sbjct: 342 DNLCSLGKLGKALD-LLKDM-ESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQG 399
Query: 482 ITPRYQTCRLILDEV-KQKHMYDAAEKIEAVMKK 514
I+ T ++D + K K + DA E I ++ +
Sbjct: 400 ISRNAITFNTLIDGLCKDKKIDDAFELINQMISE 433
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 103/433 (23%), Positives = 202/433 (46%), Gaps = 11/433 (2%)
Query: 89 QDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGK 146
Q + + +P N ++ D AL + G++ Y ++V+ L K
Sbjct: 183 QQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQ-EGHDPDVFTYNIVVNCLCK 241
Query: 147 VRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTET 205
Q+++ + +L +M +G + + T ++ + E+A+ ++ G+ + T
Sbjct: 242 NGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYT 301
Query: 206 MNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
N+L++ LCK G LA +F E+K S P+ T+N I C + ++ +A +++M+
Sbjct: 302 FNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDME 361
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
GC I+Y+TII C++ + E+ D+M QG N +T+ T++ L K +
Sbjct: 362 STGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKID 421
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTM 384
+A + +M G +P++ +N ++ + +++A + + M NG D T+ T+
Sbjct: 422 DAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILET-MTANGFEVDVVTYGTL 480
Query: 385 ITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK 444
I G + A VL M +++ +P + ++P+L+S F+ + LS L +M
Sbjct: 481 INGLCKAGRTQVALKVLRGM-RIKGMRPTPKAYNPVLQSLFRRNNIRDALS-LFREMAEV 538
Query: 445 HHLSLDITTYTLVIHGLCRANK-CEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYD 503
D TY +V GLCR + A+ EM+ P + + R++ + + M D
Sbjct: 539 GEPP-DALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDD 597
Query: 504 A-AEKIEAVMKKL 515
IE +M+K+
Sbjct: 598 YFIRAIEIIMEKV 610
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 166/348 (47%), Gaps = 8/348 (2%)
Query: 153 MRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVR-TFDELG-TFGLEKNTETMNLL 209
M+ L+ EM + GH V L + + + G ++DAV ++L FG++ +T N L
Sbjct: 1 MKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHL 60
Query: 210 LDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGC 268
L+ L + K++L SV+ E+ + I P+ TFN + C+ ++V A ++EM G
Sbjct: 61 LNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGV 120
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
P +++T++Q + + + + M GC VT +++ K G E+A+
Sbjct: 121 APDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALG 180
Query: 329 ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF 388
++ G +PD +N + L + V A+ V V M + G PD T+N ++
Sbjct: 181 YIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDV-MVQEGHDPDVFTYNIVVNCL 239
Query: 389 SHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
+G E+A +L +M C P++ TF+ L+ + + +E L L V +S
Sbjct: 240 CKNGQLEEAKGILNQMVD-RGCLPDITTFNTLIAALCTGNRLEEALD--LARQVTVKGVS 296
Query: 449 LDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV 496
D+ T+ ++I+ LC+ A LF+EM TP T ++D +
Sbjct: 297 PDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNL 344
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 187/383 (48%), Gaps = 17/383 (4%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK----GHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
+ +++ L KV ++++ ++++M ++VT NT+ + G+ A
Sbjct: 233 FNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILK 292
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKIN 251
E+ + N+ T N+L+D CK+ + A VF E++S + P T+N ++G C
Sbjct: 293 EMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEG 352
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
+++EA+ + EM P VI+Y+ +I YC++ + EL D + QG PNV+T+
Sbjct: 353 KLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFN 412
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
T++ K G EEA + + M G P++ +NCLI R +++E + EM
Sbjct: 413 TLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLN-EMQC 471
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
GV DT T+N +I+ + +KA +++EM + KP+ T++ LL G
Sbjct: 472 RGVKADTVTYNILISAWCEKKEPKKAARLIDEMLD-KGLKPSHLTYNILLNGYCMEGNLR 530
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRL 491
L+ L + K ++ TY ++I G CR K E A L EM+ + P T +
Sbjct: 531 AALN--LRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEI 588
Query: 492 ILDEVKQK--------HMYDAAE 506
I +E+ +K H+Y A++
Sbjct: 589 IKEEMMEKGFLPDIEGHLYHASQ 611
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 161/317 (50%), Gaps = 8/317 (2%)
Query: 202 NTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDE---AQ 257
N T N +++ LCK GK+ A V ++K PN T+N I G+CK+ RV + A
Sbjct: 229 NLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKAD 288
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
++EM + P ++++ +I +C+ N S ++ +EMQ+QG P VVTY ++++ L
Sbjct: 289 AILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGL 348
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
G EA + ++M KP+ +N LI + ++EA ++ + + G+ P+
Sbjct: 349 CNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFD-NIGKQGLTPN 407
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
TFNT++ + G E+AF +L+++ + PN T++ L+ + GK +E + L
Sbjct: 408 VITFNTLLHGYCKFGKMEEAF-LLQKVMLEKGFLPNASTYNCLIVGFCREGKMEE-VKNL 465
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVK 497
L++M + D TY ++I C + + A L EM+ + P + T ++L+
Sbjct: 466 LNEM-QCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYC 524
Query: 498 QKHMYDAAEKIEAVMKK 514
+ AA + M+K
Sbjct: 525 MEGNLRAALNLRKQMEK 541
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 103/422 (24%), Positives = 189/422 (44%), Gaps = 28/422 (6%)
Query: 117 ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI-----VTLNTI 171
L F W+ +S E+ ++++L + ++R++L+ KG + +++
Sbjct: 90 VLRYFNWSRRELNVNYSIELICRLLNLLANAKHYPKIRSILDSFVKGETNCSISLIFHSL 149
Query: 172 AKVMRRFSGAGQWED--------------AVRTFDELGTFGLEKNTETMNLLLDTLCKEG 217
+ +F D + F G + + + + N LL L KE
Sbjct: 150 SVCSGQFCANSIIADMLVLAYVENSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSALVKEN 209
Query: 218 KVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYS 276
+ V+ E+ + I PN TFN I+G CK+ ++++A + +MK G P V++Y+
Sbjct: 210 EFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYN 269
Query: 277 TIIQSYCRQYNFSKVYE---LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
T+I YC+ K+Y+ +L EM PN VT+ ++ K + A+++ E+M
Sbjct: 270 TLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEM 329
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
+ G KP +N L+ L ++ EA + EM + + P+ T+N +I +
Sbjct: 330 QSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLD-EMLSSNLKPNVITYNALINGYCKKKL 388
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
E+A + + + K + PNV TF+ LL K GK +E LL ++ + + +T
Sbjct: 389 LEEARELFDNIGK-QGLTPNVITFNTLLHGYCKFGKMEEAF--LLQKVMLEKGFLPNAST 445
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE-VKQKHMYDAAEKIEAVM 512
Y +I G CR K E L EM + T +++ ++K AA I+ ++
Sbjct: 446 YNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEML 505
Query: 513 KK 514
K
Sbjct: 506 DK 507
>gi|224093900|ref|XP_002310039.1| predicted protein [Populus trichocarpa]
gi|222852942|gb|EEE90489.1| predicted protein [Populus trichocarpa]
Length = 507
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 121/440 (27%), Positives = 208/440 (47%), Gaps = 14/440 (3%)
Query: 68 DVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFK---DDWKSALGIFRWA 124
D+ + ++ S Q+LKQ + S+ L++K++ R + + AL F +
Sbjct: 40 DIQVDAIYNIISNSTSSQNLKQSLKSTGVFLSNDLIDKVLKRVRFSHGNPLQALDFFNFT 99
Query: 125 GSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKG--HIVTLNTIAKVMRRFSGAG 182
G+ HSS + M+ ILG+ R+ D + +L ++ + +++T T+ V+ R +
Sbjct: 100 ADRRGFYHSSYSLDTMLYILGRSRKFDHIWDVLIDIKRKDRNLITPRTLQVVLGRVAKVC 159
Query: 183 QWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNI 242
V +F + +T N LL TLC+E + AR+V+ LK PN TFNI
Sbjct: 160 SVRMTVESFWKFKRLVPVFDTSCFNALLRTLCQEKSMSDARNVYHHLKKGFRPNLQTFNI 219
Query: 243 FIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
+ GW +EA+ +EMK G P +++Y+++I +C+ K Y ++ M+ +
Sbjct: 220 LLSGW---KSSEEAELFYEEMKELGVKPDIVTYNSLIDVFCKGRELEKAYGVVARMREED 276
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
P+V+TYT+++ L G ++A + ++MK G PD +N +I A R+ +A
Sbjct: 277 ILPDVITYTSIIGGLGLVGQPDKARDMLKEMKEHGCYPDVAAYNAVIRNYCIAKRL-DAA 335
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLK 422
Y EM G++P+ +++N +FS ++ M C PN Q+ L+K
Sbjct: 336 YSLMAEMESKGMSPNATSYNLFFRVFSWSNDLRNSWDFYGRMMD-AGCLPNTQSCMFLIK 394
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
FK + E QL +DMV K S I +++ LC K A F +M+
Sbjct: 395 -LFKRHEKVEMALQLWNDMVEKGFGSY-ILVSDVLLGMLCDMGKLVEAEKCFLQMVEKGH 452
Query: 483 TPRYQTCRLI--LDEVKQKH 500
P + R I L E+ KH
Sbjct: 453 KPSNVSFRRIKVLMELANKH 472
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 109/251 (43%), Gaps = 13/251 (5%)
Query: 266 HGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT---VMSYLAKSGD 322
G + S T++ R F ++++L +++ + N++T T V+ +AK
Sbjct: 103 RGFYHSSYSLDTMLYILGRSRKFDHIWDVLIDIKRKD--RNLITPRTLQVVLGRVAKVCS 160
Query: 323 FEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFN 382
+ K K + D+ FN L+ TL + + +A VY + G P+ TFN
Sbjct: 161 VRMTVESFWKFKRLVPVFDTSCFNALLRTLCQEKSMSDARNVYH--HLKKGFRPNLQTFN 218
Query: 383 TMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMV 442
+++ + E+A EEM +L KP++ T++ L+ F G+ E ++ M
Sbjct: 219 ILLSGWKSS---EEAELFYEEMKEL-GVKPDIVTYNSLI-DVFCKGRELEKAYGVVARMR 273
Query: 443 NKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMY 502
+ L D+ TYT +I GL + + A + KEM H P ++
Sbjct: 274 EEDILP-DVITYTSIIGGLGLVGQPDKARDMLKEMKEHGCYPDVAAYNAVIRNYCIAKRL 332
Query: 503 DAAEKIEAVMK 513
DAA + A M+
Sbjct: 333 DAAYSLMAEME 343
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 116/397 (29%), Positives = 189/397 (47%), Gaps = 15/397 (3%)
Query: 103 VNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM 160
VN LI+ F + AL + A S G+ Y +V+ L K+ +++ M
Sbjct: 276 VNVLINGFCKQGRIDQALSFIQEAVS-EGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAM 334
Query: 161 SKG----HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKE 216
G I T N++ + + G+ E+AV+ D++ + N T N ++ +LCKE
Sbjct: 335 LLGGLDPDIYTYNSLISGLCKL---GEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKE 391
Query: 217 GKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISY 275
+V+ A + L S I P+ TFN I G C + A +EMKG GC P +Y
Sbjct: 392 NRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTY 451
Query: 276 STIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKI 335
+ +I S C + LL EM+ GC NVV Y T++ K+ EEA I ++M++
Sbjct: 452 NMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMEL 511
Query: 336 VGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHE 395
G DS +N LI L ++ RV++A + +M G+ PD T+N+++T F G +
Sbjct: 512 QGVSRDSVTYNTLIDGLCKSKRVEDAAQLMD-QMIMEGLRPDKFTYNSLLTHFCKTGDIK 570
Query: 396 KAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYT 455
KA +++ M C P++ T+ L+ K G+ + S+LL + + L Y
Sbjct: 571 KAADIVQTMTS-SGCNPDIVTYATLISGLCKAGRV-QVASRLLRS-IQMKGMVLTPHAYN 627
Query: 456 LVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLI 492
VI L + N+ A LF+EM+ P T +++
Sbjct: 628 PVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIV 664
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 121/491 (24%), Positives = 219/491 (44%), Gaps = 80/491 (16%)
Query: 98 PSHYLVNKLIH--RFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRA 155
P + +LI R + D +AL +F WA P + SS +YE ++ LGK + MR
Sbjct: 59 PPDFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRR 118
Query: 156 LLEEM-----------------SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
+LEEM S G + + +++ + + R ++ L
Sbjct: 119 VLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVL 178
Query: 199 LEKN--------------------TETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNA 237
++ N T N+L+ LCK +V A + E+ S + P+
Sbjct: 179 VDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDE 238
Query: 238 HTF-----------------------------------NIFIHGWCKINRVDEAQWTIQE 262
TF N+ I+G+CK R+D+A IQE
Sbjct: 239 TTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQE 298
Query: 263 MKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGD 322
G P +Y+T++ C+ + E++D M G P++ TY +++S L K G+
Sbjct: 299 AVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGE 358
Query: 323 FEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFN 382
EEA++I ++M P++ +N +I +L + +RV EA + ++ + G+ PD TFN
Sbjct: 359 IEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARL-LTSKGILPDVCTFN 417
Query: 383 TMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMV 442
++I +H+ A + EEM K + C+P+ T++ L+ S + K +E L+ L + +
Sbjct: 418 SLIQGLCLSSNHKSAMDLFEEM-KGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMEL 476
Query: 443 NKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHM 501
N + ++ Y +I G C+ + E A +F EM ++ T ++D + K K +
Sbjct: 477 N--GCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRV 534
Query: 502 YDAAEKIEAVM 512
DAA+ ++ ++
Sbjct: 535 EDAAQLMDQMI 545
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 134/328 (40%), Gaps = 48/328 (14%)
Query: 61 SPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSAL 118
SP + IIS + + DE + + + I P N LI + KSA+
Sbjct: 375 SPNAVTYNAIISSLCKENRVDEATE-IARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAM 433
Query: 119 GIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKG----HIVTLNTIAKV 174
+F G Y M++D L R++++ LL+EM ++V NT+
Sbjct: 434 DLFEEMKG-KGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTL--- 489
Query: 175 MRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCI 233
+ F + E+A FDE+ G+ +++ T N L+D LCK +VE A + ++ +
Sbjct: 490 IDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGL 549
Query: 234 PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
P+ T+N + +CK + +A +Q M GC+P +++Y+T+I C+
Sbjct: 550 RPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASR 609
Query: 294 LLDEMQAQGC-----------------------------------PPNVVTYTTVMSYLA 318
LL +Q +G PP+ +TY V L
Sbjct: 610 LLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLC 669
Query: 319 KSGD-FEEAIRITEKMKIVGSKPDSRFF 345
G EA+ T +M G+ P+ F
Sbjct: 670 NGGGPIGEAVDFTVEMIERGNIPEFSSF 697
>gi|356534319|ref|XP_003535704.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Glycine max]
Length = 507
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 203/390 (52%), Gaps = 5/390 (1%)
Query: 97 QPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRAL 156
+PS LV +++++ + AL FRWA ++H++E + +++ LGK+RQ + L
Sbjct: 83 KPSPELVLEVLNKLSNAGVLALSFFRWAEKQSEFKHTTEAFHALIEALGKIRQFKMIWTL 142
Query: 157 LEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKE 216
+ +M + ++T +T + V RR++ A + ++A++TF+++ +GL+ + N L+D LCK
Sbjct: 143 VNDMKQRKLLTSDTFSLVARRYARARKAKEAIKTFEKMEHYGLKPHVSDFNKLVDVLCKS 202
Query: 217 GKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISY 275
VE A VF +++ + P+ ++ I + GW + + + +EM+ G V++Y
Sbjct: 203 KSVEEAHEVFDKMRKLRLDPDIKSYTILLEGWSQQQNLIKVNEVCREMEDKGFQLDVVAY 262
Query: 276 STIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKI 335
I+ ++C+ F + L EM+A+G P+ Y T+++ L +EA+ E K
Sbjct: 263 GIIMNAHCKAKKFDEAIGLYHEMKARGVRPSPHVYCTLINGLGSDKRLDEALEFFEVSKA 322
Query: 336 VGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHE 395
G P++ +N ++ + R+ +A Y EM + G+ P++ TF+ ++ E
Sbjct: 323 SGFVPEAPTYNAVVGAYCWSLRMDDA-YRMVGEMKKCGIGPNSRTFDIVLHHLIKGRRIE 381
Query: 396 KAFHVLEEMNKLEH-CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTY 454
+A V MN E C+P+V T+ +++ D ++ + D+M K L + +
Sbjct: 382 EASSVFRRMNGGEFGCEPSVSTYEIMVRMFCNEELLDMAVA-VWDEMKGKGILP-GMHMF 439
Query: 455 TLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
+ ++ LC +K + A F+EM+ I P
Sbjct: 440 STLVCALCHESKLDEACKYFQEMLDVGIRP 469
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 95/216 (43%), Gaps = 4/216 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLE-EMSKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G S +Y +++ LG +++D+ E + G + T V+ + + + +DA
Sbjct: 289 GVRPSPHVYCTLINGLGSDKRLDEALEFFEVSKASGFVPEAPTYNAVVGAYCWSLRMDDA 348
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC---IPPNAHTFNIFI 244
R E+ G+ N+ T +++L L K ++E A SVF + P+ T+ I +
Sbjct: 349 YRMVGEMKKCGIGPNSRTFDIVLHHLIKGRRIEEASSVFRRMNGGEFGCEPSVSTYEIMV 408
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
+C +D A EMKG G P + +ST++ + C + + + EM G
Sbjct: 409 RMFCNEELLDMAVAVWDEMKGKGILPGMHMFSTLVCALCHESKLDEACKYFQEMLDVGIR 468
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
P ++T+ L +G A+ T K+ + P
Sbjct: 469 PPAKMFSTLKEALVDAGMEHVAMHFTLKIDKLRKSP 504
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 117/394 (29%), Positives = 192/394 (48%), Gaps = 17/394 (4%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQW 184
G + + +Y ++++L + +M + ++ EM K +VT NT+ K + R A Q
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCR---AHQV 197
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSV---FLELKSCIPPNAHTFN 241
AV +E+ + G+ + T L+ +EG +E A V LE+ C T N
Sbjct: 198 RTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEM-GCSATKV-TVN 255
Query: 242 IFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ 301
+ I+G+CK+ RV++A IQ+ G P I+Y+T + C+ + +++D M +
Sbjct: 256 VLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQE 315
Query: 302 GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
G P+V TY V++ L K+G EEA I +M G PD FN LI L +R++EA
Sbjct: 316 GHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEA 375
Query: 362 VYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLL 421
+ + + ++ GV+PD TFN +I G A + EEM K C P+ T++ L+
Sbjct: 376 LDLAR-QVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM-KNSGCTPDEVTYNTLI 433
Query: 422 KSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHD 481
+ GK + L LL DM TY +I GLC+ + E A +F +M
Sbjct: 434 DNLCSLGKLGKALD-LLKDM-ESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQG 491
Query: 482 ITPRYQTCRLILDEV-KQKHMYDAAEKIEAVMKK 514
I+ T ++D + K K + DA E I ++ +
Sbjct: 492 ISRNAITFNTLIDGLCKDKKIDDAFELINQMISE 525
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 190/391 (48%), Gaps = 8/391 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G++ Y ++V+ L K Q+++ + +L +M +G + + T ++ + E+A
Sbjct: 316 GHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEA 375
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHG 246
+ ++ G+ + T N+L++ LCK G LA +F E+K S P+ T+N I
Sbjct: 376 LDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDN 435
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C + ++ +A +++M+ GC I+Y+TII C++ + E+ D+M QG N
Sbjct: 436 LCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRN 495
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
+T+ T++ L K ++A + +M G +P++ +N ++ + +++A + +
Sbjct: 496 AITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILE 555
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
M NG D T+ T+I G + A VL M +++ +P + ++P+L+S F+
Sbjct: 556 T-MTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGM-RIKGMRPTPKAYNPVLQSLFR 613
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANK-CEWAYLLFKEMIGHDITPR 485
+ LS L +M D TY +V GLCR + A+ EM+ P
Sbjct: 614 RNNIRDALS-LFREMAEVGEPP-DALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPE 671
Query: 486 YQTCRLILDEVKQKHMYDA-AEKIEAVMKKL 515
+ + R++ + + M D IE +M+K+
Sbjct: 672 FSSFRMLAEGLLNLGMDDYFIRAIEIIMEKV 702
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 187/392 (47%), Gaps = 8/392 (2%)
Query: 109 RFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVT 167
R + D +AL + A + + E+YE ++ LG V +D M+ L+ EM + GH V
Sbjct: 49 REQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVK 108
Query: 168 LNTIAKVMRRFSGAGQWEDAVR-TFDELGT-FGLEKNTETMNLLLDTLCKEGKVELARSV 225
L + + + G ++DAV ++L FG++ +T N LL+ L + K++L SV
Sbjct: 109 LGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESV 168
Query: 226 FLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCR 284
+ E+ + I P+ TFN + C+ ++V A ++EM G P +++T++Q +
Sbjct: 169 YSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVE 228
Query: 285 QYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRF 344
+ + + M GC VT +++ K G E+A+ ++ G +PD
Sbjct: 229 EGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQIT 288
Query: 345 FNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
+N + L + V A+ V V M + G PD T+N ++ +G E+A +L +M
Sbjct: 289 YNTFVNGLCQNDHVGHALKVMDV-MVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 347
Query: 405 NKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRA 464
C P++ TF+ L+ + + +E L L V +S D+ T+ ++I+ LC+
Sbjct: 348 VD-RGCLPDITTFNTLIAALCTGNRLEEALD--LARQVTVKGVSPDVYTFNILINALCKV 404
Query: 465 NKCEWAYLLFKEMIGHDITPRYQTCRLILDEV 496
A LF+EM TP T ++D +
Sbjct: 405 GDPHLALRLFEEMKNSGCTPDEVTYNTLIDNL 436
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 183/360 (50%), Gaps = 11/360 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKG-HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +++ K ++D+ +LE MS +VT NTI +R +G+ ++A+ D
Sbjct: 180 YNVLIGGYCKSGEIDKALQVLERMSVAPDVVTYNTI---LRSLCDSGKLKEAMEVLDRQM 236
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRV 253
+ T +L++ C + V A + E+ K C P+ T+N+ I+G CK R+
Sbjct: 237 QRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGC-KPDVVTYNVLINGICKEGRL 295
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
DEA + M +GC P VI+++ I++S C + LL +M +GC P+VVT+ +
Sbjct: 296 DEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNIL 355
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
+++L + AI + EKM G P+S +N L++ + ++ A+ ++ M G
Sbjct: 356 INFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEI-MVSRG 414
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
PD T+NT++T G + A +L +++ + C P + T++ ++ K GKT E
Sbjct: 415 CYPDIVTYNTLLTALCKDGKADAAVEILNQLSS-KGCSPVLITYNTVIDGLTKVGKT-EY 472
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
++LL++M + L DI TY+ ++ GL K + A +F +M G I P T I+
Sbjct: 473 AAELLEEM-RRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIM 531
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 188/402 (46%), Gaps = 12/402 (2%)
Query: 119 GIFRWAGSCPGYEHSSEIYEMMVDI----LGKVRQMDQMRALLEEM-SKGHIVTLNTIAK 173
GI + S G S E +I L + ++++ LE M +G I +
Sbjct: 88 GIGMESSSPNGVNGSRSFEEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTS 147
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCI 233
++R F +G+ A R + L G + T N+L+ CK G+++ A V + +
Sbjct: 148 LIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERMS--V 205
Query: 234 PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
P+ T+N + C ++ EA + C+P VI+Y+ +I++ C + +
Sbjct: 206 APDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMK 265
Query: 294 LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLG 353
LLDEM+ +GC P+VVTY +++ + K G +EAI+ M + G +P+ N ++ ++
Sbjct: 266 LLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMC 325
Query: 354 RASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPN 413
R +A + +M G +P TFN +I +A VLE+M K C PN
Sbjct: 326 STGRWMDAERLL-ADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPK-HGCMPN 383
Query: 414 VQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLL 473
+++PLL + K D + + L+ MV++ DI TY ++ LC+ K + A +
Sbjct: 384 SLSYNPLLHGFCQEKKMDRAI-EYLEIMVSRGCYP-DIVTYNTLLTALCKDGKADAAVEI 441
Query: 474 FKEMIGHDITPRYQTCRLILDEVKQKHMYD-AAEKIEAVMKK 514
++ +P T ++D + + + AAE +E + +K
Sbjct: 442 LNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRK 483
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 151/293 (51%), Gaps = 12/293 (4%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++++ + K ++D+ L M + +++T N I +R G+W DA R
Sbjct: 282 YNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNII---LRSMCSTGRWMDAERLLA 338
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK--SCIPPNAHTFNIFIHGWCKI 250
++ G + T N+L++ LC++ + A V ++ C+P N+ ++N +HG+C+
Sbjct: 339 DMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMP-NSLSYNPLLHGFCQE 397
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
++D A ++ M GC+P +++Y+T++ + C+ E+L+++ ++GC P ++TY
Sbjct: 398 KKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITY 457
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
TV+ L K G E A + E+M+ G KPD ++ L+ LG +V EA+ ++ +M
Sbjct: 458 NTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFH-DME 516
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
+ P T+N ++ +A L M + + CKP T+ L++
Sbjct: 517 GLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVE-KGCKPTKATYTILIEG 568
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 113/259 (43%), Gaps = 29/259 (11%)
Query: 41 IESYCSDGARLDHHQVL-------CVDSPRLPDIDVIIS----KVHVGSSEDEVFQSLKQ 89
+ S CS G +D ++L C SP + +++I+ K +G + D V + + +
Sbjct: 321 LRSMCSTGRWMDAERLLADMLRKGC--SPSVVTFNILINFLCRKRLLGRAID-VLEKMPK 377
Query: 90 DHVCNAIQPSHYLVNKLIHRFKDDWK-----SALGIFRWAGSCPGYEHSSEIYEMMVDIL 144
H C P+ N L+H F + K L I G P Y ++ L
Sbjct: 378 -HGC---MPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIV----TYNTLLTAL 429
Query: 145 GKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNT 203
K + D +L ++S KG L T V+ + G+ E A +E+ GL+ +
Sbjct: 430 CKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDI 489
Query: 204 ETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQE 262
T + LL L EGKV+ A +F +++ I P+A T+N + G CK + A +
Sbjct: 490 ITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAY 549
Query: 263 MKGHGCHPCVISYSTIIQS 281
M GC P +Y+ +I+
Sbjct: 550 MVEKGCKPTKATYTILIEG 568
>gi|224081016|ref|XP_002306265.1| predicted protein [Populus trichocarpa]
gi|222855714|gb|EEE93261.1| predicted protein [Populus trichocarpa]
Length = 548
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 184/385 (47%), Gaps = 15/385 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +M+DIL KVRQ D L+ EM + ++ T T ++RR AG A+R FD++
Sbjct: 143 YNLMIDILAKVRQFDVCWQLIVEMDQRNVKPTSETFFVLIRRLVAAGLTRQAIRAFDDME 202
Query: 196 TFGLEKNTET-MNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVD 254
+F E ET LLDTLCK G V++ +F + K PN + + I+GWCKI R+D
Sbjct: 203 SFVSEPVNETHFCFLLDTLCKYGYVKVGVEIFNKRKHRFSPNVKMYTVLIYGWCKIGRID 262
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF----------SKVYELLDEMQAQGCP 304
A+ ++E G V++Y+ ++ CR+ + + L DEM+ +G
Sbjct: 263 MAERFLKETGERGIEATVVTYNVLLNGICRRASLHPESRFERTITLAENLFDEMRERGIE 322
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
P+V +++ V+ +++ E + + MK G P + ++ L R+++A +
Sbjct: 323 PDVTSFSIVLHVYSRAHKPELTLDKLKLMKEKGICPSVVTYTSVVKCLCSCGRIEDAEEL 382
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
EM NGV+ T+N + E A + ++M + + +++ LL+
Sbjct: 383 LG-EMVRNGVSRTAVTYNCFFKEYMGRKDAESALKLYKKMREDGLGSLGLHSYNILLRMF 441
Query: 425 FKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
+ D ++++ +D+ L D+ +YT++IHGLC K A F EMI + P
Sbjct: 442 MMLNRLD-IVNEIWEDL-KSSGLGPDLDSYTMLIHGLCEKEKWREACKFFVEMIEKGLLP 499
Query: 485 RYQTCRLILDEVKQKHMYDAAEKIE 509
+ T + + Q M +++
Sbjct: 500 QKVTFETLYKGLIQSDMLRTWRRLK 524
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 81/186 (43%), Gaps = 5/186 (2%)
Query: 150 MDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLL 209
+D+++ + E+ +VT ++ K + G+ EDA E+ G+ + T N
Sbjct: 345 LDKLKLMKEKGICPSVVTYTSVVKCL---CSCGRIEDAEELLGEMVRNGVSRTAVTYNCF 401
Query: 210 LDTLCKEGKVELARSVFLELK--SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG 267
E A ++ +++ H++NI + + +NR+D +++K G
Sbjct: 402 FKEYMGRKDAESALKLYKKMREDGLGSLGLHSYNILLRMFMMLNRLDIVNEIWEDLKSSG 461
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
P + SY+ +I C + + + + EM +G P VT+ T+ L +S
Sbjct: 462 LGPDLDSYTMLIHGLCEKEKWREACKFFVEMIEKGLLPQKVTFETLYKGLIQSDMLRTWR 521
Query: 328 RITEKM 333
R+ +K+
Sbjct: 522 RLKKKL 527
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 99/225 (44%), Gaps = 12/225 (5%)
Query: 273 ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEK 332
++Y+ +I + F ++L+ EM + P T+ ++ L +G +AIR +
Sbjct: 141 VTYNLMIDILAKVRQFDVCWQLIVEMDQRNVKPTSETFFVLIRRLVAAGLTRQAIRAFDD 200
Query: 333 MKIVGSKP-DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHH 391
M+ S+P + F L+ TL + V+ V ++ ++ +P+ + +I +
Sbjct: 201 MESFVSEPVNETHFCFLLDTLCKYGYVKVGVEIFNKR--KHRFSPNVKMYTVLIYGWCKI 258
Query: 392 GHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS-CFKTGKTDE-------CLSQLLDDMVN 443
G + A L+E + + V T++ LL C + E L++ L D +
Sbjct: 259 GRIDMAERFLKETGE-RGIEATVVTYNVLLNGICRRASLHPESRFERTITLAENLFDEMR 317
Query: 444 KHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ + D+T++++V+H RA+K E K M I P T
Sbjct: 318 ERGIEPDVTSFSIVLHVYSRAHKPELTLDKLKLMKEKGICPSVVT 362
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 91/220 (41%), Gaps = 24/220 (10%)
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
VTY ++ LAK F+ ++ +M KP S F LI L A ++A+ +
Sbjct: 141 VTYNLMIDILAKVRQFDVCWQLIVEMDQRNVKPTSETFFVLIRRLVAAGLTRQAIRAFD- 199
Query: 368 EMPENGVAPDTST-FNTMITMFSHHGHHEKAFHVLEEMNKLEH-CKPNVQTFHPLLKSCF 425
+M P T F ++ +G+ + +E NK +H PNV+ + L+
Sbjct: 200 DMESFVSEPVNETHFCFLLDTLCKYGYVKVG---VEIFNKRKHRFSPNVKMYTVLIYGWC 256
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCR----------ANKCEWAYLLFK 475
K G+ D +++ + + + TY ++++G+CR A LF
Sbjct: 257 KIGRID--MAERFLKETGERGIEATVVTYNVLLNGICRRASLHPESRFERTITLAENLFD 314
Query: 476 EMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
EM I P + ++L H+Y A K E + KL
Sbjct: 315 EMRERGIEPDVTSFSIVL------HVYSRAHKPELTLDKL 348
>gi|313851107|ref|NP_001186539.1| pentatricopeptide repeat protein [Zea mays]
gi|312064725|gb|ADQ27447.1| pentatricopeptide repeat protein [Zea mays]
gi|414872960|tpg|DAA51517.1| TPA: hypothetical protein ZEAMMB73_325693 [Zea mays]
Length = 489
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 180/373 (48%), Gaps = 13/373 (3%)
Query: 117 ALGIFRWA-----GSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTI 171
A F WA G C H+ Y +V L K+RQ M ++ M K + + T
Sbjct: 87 AYRFFEWARKQKRGVCA---HTVRSYHTVVTSLAKIRQYQLMWDVVAIMRKEGVANVETF 143
Query: 172 AKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS 231
+MR+++ A + ++AV TF+ + +G+ N N LL LCK V A+ +F ++ +
Sbjct: 144 GIIMRKYARAQKLDEAVYTFNVMEKYGVAHNLAAFNSLLSALCKSKNVRKAQEIFDKMNN 203
Query: 232 CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKV 291
P+A T++I + GW + + + + +M GC P +++Y ++ + C+ +
Sbjct: 204 RFSPDAKTYSILLEGWGRAPSLPKMREVYSDMLAAGCQPDIVTYGIMVDALCKTGRVEEA 263
Query: 292 YELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYT 351
++ +M ++GC P Y+ ++ E+A+ M+ G PD +N LI
Sbjct: 264 VCVVQDMSSRGCQPTTFIYSILVHTYGVDMRIEDAVAAFLDMEKDGIMPDVVVYNALITA 323
Query: 352 LGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCK 411
+ + + A V +M +G++P++ T+N ++ G ++A+ V M ++ CK
Sbjct: 324 FCKVKKFENAFRVMD-DMQGHGISPNSRTWNIILNTLISLGKDDEAYRVFRSM--IKRCK 380
Query: 412 PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAY 471
P+ T+ ++K + K + L ++ M K L + T++++I+GLC + A
Sbjct: 381 PDSDTYTMMIKMFCENDKIEMAL-KVWKYMRLKQFLP-SMHTFSVLINGLCDKGEVSQAC 438
Query: 472 LLFKEMIGHDITP 484
+L ++MI I P
Sbjct: 439 VLLEDMIEKGIRP 451
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 139/315 (44%), Gaps = 22/315 (6%)
Query: 96 IQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRA 155
++ + + +K+ +RF D K+ + G P E+Y D+L Q D
Sbjct: 191 VRKAQEIFDKMNNRFSPDAKTYSILLEGWGRAPSLPKMREVYS---DMLAAGCQPD---- 243
Query: 156 LLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK 215
IVT + + + G+ E+AV ++ + G + T ++L+ T
Sbjct: 244 ---------IVTYGIMVDALCK---TGRVEEAVCVVQDMSSRGCQPTTFIYSILVHTYGV 291
Query: 216 EGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVIS 274
+ ++E A + FL++ K I P+ +N I +CK+ + + A + +M+GHG P +
Sbjct: 292 DMRIEDAVAAFLDMEKDGIMPDVVVYNALITAFCKVKKFENAFRVMDDMQGHGISPNSRT 351
Query: 275 YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
++ I+ + + Y + M + C P+ TYT ++ ++ E A+++ + M+
Sbjct: 352 WNIILNTLISLGKDDEAYRVFRSM-IKRCKPDSDTYTMMIKMFCENDKIEMALKVWKYMR 410
Query: 335 IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHH 394
+ P F+ LI L V +A + + +M E G+ P STF + + G
Sbjct: 411 LKQFLPSMHTFSVLINGLCDKGEVSQACVLLE-DMIEKGIRPPGSTFGKLRQLLLKEGRK 469
Query: 395 EKAFHVLEEMNKLEH 409
+ ++E+M L
Sbjct: 470 DVLDFLVEKMKILAQ 484
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 105/216 (48%), Gaps = 1/216 (0%)
Query: 126 SCPGYEHSSEIYEMMVDILG-KVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQW 184
S G + ++ IY ++V G +R D + A L+ G + + ++ F ++
Sbjct: 271 SSRGCQPTTFIYSILVHTYGVDMRIEDAVAAFLDMEKDGIMPDVVVYNALITAFCKVKKF 330
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFI 244
E+A R D++ G+ N+ T N++L+TL GK + A VF + P++ T+ + I
Sbjct: 331 ENAFRVMDDMQGHGISPNSRTWNIILNTLISLGKDDEAYRVFRSMIKRCKPDSDTYTMMI 390
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
+C+ ++++ A + M+ P + ++S +I C + S+ LL++M +G
Sbjct: 391 KMFCENDKIEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIR 450
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
P T+ + L K G + + EKMKI+ +P
Sbjct: 451 PPGSTFGKLRQLLLKEGRKDVLDFLVEKMKILAQEP 486
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 179/357 (50%), Gaps = 16/357 (4%)
Query: 165 IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARS 224
IVT NTI + + + G + F+EL G + T N L+D+LCK G +E AR
Sbjct: 81 IVTYNTIINGLCKSNELGA---GMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARR 137
Query: 225 V--FLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCH--PCVISYSTIIQ 280
+ + + C+P N T+++ I+G CK+ R+DEA+ IQEM C P +I+Y++ +
Sbjct: 138 LHGGMSSRGCVP-NVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLD 196
Query: 281 SYCRQYNFSKVYELLDEMQAQG--CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
C+Q ++ EL+ ++ P+ VT++T++ L K G +EA + M G
Sbjct: 197 GLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGY 254
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
P+ +N L+ L +A +++ A + + M + GV PD T++ ++ F ++A
Sbjct: 255 VPNVVTYNALVNGLCKADKMERAHAMIE-SMVDKGVTPDVITYSVLVDAFCKASRVDEAL 313
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
+L M C PNV TF+ ++ K+ ++ E L V L D T+ ++I
Sbjct: 314 ELLHGMAS-RGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQ--VYNRMLVPDKVTFNILI 370
Query: 459 HGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
G C+A E A LF+EM+ ++ P T ++D + + +AA I +M L
Sbjct: 371 AGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNL 427
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 189/364 (51%), Gaps = 12/364 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKG------HIVTLNTIAKVMRRFSGAGQWEDAVRT 190
Y ++++ L KV ++D+ R L++EM++ +I+T N+ + + S + + +R+
Sbjct: 154 YSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRS 213
Query: 191 FDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKI 250
+ G+ + +T T + L+D LCK G+ + A + + + PN T+N ++G CK
Sbjct: 214 LRD-GSLRVSPDTVTFSTLIDGLCKCGQTDEACNDDM-IAGGYVPNVVTYNALVNGLCKA 271
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
++++ A I+ M G P VI+YS ++ ++C+ + ELL M ++GC PNVVT+
Sbjct: 272 DKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTF 331
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
+++ L KS EA +I ++ PD FN LI +A ++A +++ EM
Sbjct: 332 NSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFE-EMV 390
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKT 430
+ PD TF +I G E A +L+ M L PNV T++ L+ K+G+
Sbjct: 391 AKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNL-GVPPNVVTYNVLVHGLCKSGRI 449
Query: 431 DECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCR 490
+E + L++MV+ + + TY +++ LCRA++ + A L ++ P T
Sbjct: 450 EE-PCEFLEEMVSSGCVP-ESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYN 507
Query: 491 LILD 494
+++D
Sbjct: 508 ILVD 511
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 189/416 (45%), Gaps = 53/416 (12%)
Query: 117 ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GH---IVTLNTIA 172
AL IFR + G + Y +++ L K ++ L EE+ K GH +VT NT+
Sbjct: 64 ALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLI 123
Query: 173 KVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--K 230
+ + AG E+A R + + G N T ++L++ LCK G+++ AR + E+ K
Sbjct: 124 DSLCK---AGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRK 180
Query: 231 SC--------------------------------------IPPNAHTFNIFIHGWCKINR 252
SC + P+ TF+ I G CK +
Sbjct: 181 SCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQ 240
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
DEA +M G P V++Y+ ++ C+ + + +++ M +G P+V+TY+
Sbjct: 241 TDEA--CNDDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSV 298
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN 372
++ K+ +EA+ + M G P+ FN +I L ++ R EA + +++
Sbjct: 299 LVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQI-ALQVYNR 357
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
+ PD TFN +I G+ E+A + EEM ++ +P+V TF L+ K G+ E
Sbjct: 358 MLVPDKVTFNILIAGACKAGNFEQASALFEEMVA-KNMQPDVMTFGALIDGLCKAGQV-E 415
Query: 433 CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+LD M N + ++ TY +++HGLC++ + E +EM+ P T
Sbjct: 416 AARDILDLMGN-LGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMT 470
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/303 (30%), Positives = 146/303 (48%), Gaps = 4/303 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
GY + Y +V+ L K +M++ A++E M KG + T + ++ F A + ++A
Sbjct: 253 GYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEA 312
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHG 246
+ + + G N T N ++D LCK + A + L++ + P+ TFNI I G
Sbjct: 313 LELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAG 372
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
CK ++A +EM P V+++ +I C+ ++LD M G PPN
Sbjct: 373 ACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPN 432
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
VVTY ++ L KSG EE E+M G P+S + L+Y L RASR +A+ +
Sbjct: 433 VVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVS 492
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
++ G PDT T+N ++ G E+A VLEEM H +P+ TF +
Sbjct: 493 -KLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGH-QPDSFTFAACFGGLHR 550
Query: 427 TGK 429
+G
Sbjct: 551 SGN 553
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 148/293 (50%), Gaps = 10/293 (3%)
Query: 207 NLLLDTLCKEGKVELARSVFLE--LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
N++L +LC+ G+ A +F + + P T+N I+G CK N + +E+
Sbjct: 49 NIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELV 108
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
G HP V++Y+T+I S C+ + + L M ++GC PNVVTY+ +++ L K G +
Sbjct: 109 KRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRID 168
Query: 325 EAIRITEKM--KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ-VEMPENGVAPDTSTF 381
EA + ++M K P+ +N + L + S EA + + + V+PDT TF
Sbjct: 169 EARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTF 228
Query: 382 NTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDM 441
+T+I G ++A + ++M + PNV T++ L+ K K + +++ M
Sbjct: 229 STLIDGLCKCGQTDEACN--DDMIAGGYV-PNVVTYNALVNGLCKADKMERA-HAMIESM 284
Query: 442 VNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
V+K ++ D+ TY++++ C+A++ + A L M TP T I+D
Sbjct: 285 VDK-GVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIID 336
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 130/270 (48%), Gaps = 9/270 (3%)
Query: 240 FNIFIHGWCKINRVDEAQWTIQ-EMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
+NI + C+ A + EM G P +++Y+TII C+ EL +E+
Sbjct: 48 YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 107
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRV 358
+G P+VVTY T++ L K+GD EEA R+ M G P+ ++ LI L + R+
Sbjct: 108 VKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRI 167
Query: 359 QEAVYVYQVEMPENG--VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE-HCKPNVQ 415
EA + Q EM V P+ T+N+ + +A ++ + P+
Sbjct: 168 DEARELIQ-EMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTV 226
Query: 416 TFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFK 475
TF L+ K G+TDE + DDM+ ++ ++ TY +++GLC+A+K E A+ + +
Sbjct: 227 TFSTLIDGLCKCGQTDEACN---DDMIAGGYVP-NVVTYNALVNGLCKADKMERAHAMIE 282
Query: 476 EMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
M+ +TP T +++D + D A
Sbjct: 283 SMVDKGVTPDVITYSVLVDAFCKASRVDEA 312
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 113/206 (54%), Gaps = 2/206 (0%)
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHT 239
AG +E A F+E+ ++ + T L+D LCK G+VE AR + L +PPN T
Sbjct: 376 AGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVT 435
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+N+ +HG CK R++E ++EM GC P ++Y +++ + CR +L+ +++
Sbjct: 436 YNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLK 495
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
+ G P+ VTY ++ L KSG E+AI + E+M G +PDS F L R+ +
Sbjct: 496 SFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLA 555
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMI 385
+ + +V + + G+ PD +T ++++
Sbjct: 556 GTMELLRVVLAK-GMLPDATTCSSIL 580
>gi|297839365|ref|XP_002887564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297333405|gb|EFH63823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 451
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 184/369 (49%), Gaps = 6/369 (1%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSC-PGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM 160
LVN ++ R + AL F + + Y H + +++ +DI ++ + +L+ M
Sbjct: 56 LVNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHIHPTVWSLIHRM 115
Query: 161 SKGHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV 219
I + T A V R++ +G+ + AV+ F + G ++ + N +LD LCK +V
Sbjct: 116 RSLRIGPSPKTFAIVAERYASSGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRV 175
Query: 220 ELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
E A +F L+ + T+N+ ++GWC I R +A ++EM G +P + +Y+T++
Sbjct: 176 EKAYELFRALRGRFSADTVTYNVIVNGWCLIKRTPKALEVLKEMVDRGINPNLTTYNTML 235
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
Q + R + +E EM+ + C +VVTYTTV+ +G+ + + ++M G
Sbjct: 236 QGFFRAGQIRQAWEFFLEMKKRNCEIDVVTYTTVVHGFGVAGEIKRTRNVFDEMIREGVL 295
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
P +N I L + V+ AV +++ EM G P+ +T+N +I H G +
Sbjct: 296 PSVATYNAFIQVLCKKDSVENAVVMFE-EMVRKGYEPNVTTYNVLIRGLFHAGKFSRGEE 354
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIH 459
+++ M E C+PN QT++ +++ + + ++ L L + M L ++ TY ++I
Sbjct: 355 LMQRMEN-EGCEPNFQTYNMMIRYYSECSEVEKALG-LFEKMGTGDCLP-NLDTYNILIS 411
Query: 460 GLCRANKCE 468
G+ + E
Sbjct: 412 GMFVRKRSE 420
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 111/228 (48%), Gaps = 2/228 (0%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++V+ +++ + +L+EM +G L T +++ F AGQ A F E+
Sbjct: 196 YNVIVNGWCLIKRTPKALEVLKEMVDRGINPNLTTYNTMLQGFFRAGQIRQAWEFFLEMK 255
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
E + T ++ G+++ R+VF E+ + + P+ T+N FI CK + V+
Sbjct: 256 KRNCEIDVVTYTTVVHGFGVAGEIKRTRNVFDEMIREGVLPSVATYNAFIQVLCKKDSVE 315
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
A +EM G P V +Y+ +I+ FS+ EL+ M+ +GC PN TY ++
Sbjct: 316 NAVVMFEEMVRKGYEPNVTTYNVLIRGLFHAGKFSRGEELMQRMENEGCEPNFQTYNMMI 375
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
Y ++ + E+A+ + EKM P+ +N LI + R ++ V
Sbjct: 376 RYYSECSEVEKALGLFEKMGTGDCLPNLDTYNILISGMFVRKRSEDMV 423
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 122/261 (46%), Gaps = 5/261 (1%)
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
I P+ TF I + + D+A M HGC + S++TI+ C+ K Y
Sbjct: 120 IGPSPKTFAIVAERYASSGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAY 179
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
EL ++ + + VTY +++ +A+ + ++M G P+ +N ++
Sbjct: 180 ELFRALRGR-FSADTVTYNVIVNGWCLIKRTPKALEVLKEMVDRGINPNLTTYNTMLQGF 238
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
RA ++++A + + +EM + D T+ T++ F G ++ +V +EM + E P
Sbjct: 239 FRAGQIRQA-WEFFLEMKKRNCEIDVVTYTTVVHGFGVAGEIKRTRNVFDEMIR-EGVLP 296
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
+V T++ ++ K + + + ++MV K + ++TTY ++I GL A K
Sbjct: 297 SVATYNAFIQVLCKKDSVENAVV-MFEEMVRKGY-EPNVTTYNVLIRGLFHAGKFSRGEE 354
Query: 473 LFKEMIGHDITPRYQTCRLIL 493
L + M P +QT +++
Sbjct: 355 LMQRMENEGCEPNFQTYNMMI 375
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 116/257 (45%), Gaps = 6/257 (2%)
Query: 258 WT-IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSY 316
W+ I M+ P +++ + + Y K +L M GC ++ ++ T++
Sbjct: 109 WSLIHRMRSLRIGPSPKTFAIVAERYASSGKPDKAVKLFLNMHEHGCFQDLASFNTILDV 168
Query: 317 LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
L KS E+A + ++ S D+ +N ++ R +A+ V + EM + G+ P
Sbjct: 169 LCKSKRVEKAYELFRALRGRFS-ADTVTYNVIVNGWCLIKRTPKALEVLK-EMVDRGINP 226
Query: 377 DTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQ 436
+ +T+NTM+ F G +A+ EM K +C+ +V T+ ++ G+
Sbjct: 227 NLTTYNTMLQGFFRAGQIRQAWEFFLEMKK-RNCEIDVVTYTTVVHGFGVAGEIKRT-RN 284
Query: 437 LLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV 496
+ D+M+ + L + TY I LC+ + E A ++F+EM+ P T +++ +
Sbjct: 285 VFDEMIREGVLP-SVATYNAFIQVLCKKDSVENAVVMFEEMVRKGYEPNVTTYNVLIRGL 343
Query: 497 KQKHMYDAAEKIEAVMK 513
+ E++ M+
Sbjct: 344 FHAGKFSRGEELMQRME 360
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 112/242 (46%), Gaps = 6/242 (2%)
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
S+ I R + V+ L+ M++ P+ T+ V A SG ++A+++ M
Sbjct: 91 SFDLAIDIAARLHIHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASSGKPDKAVKLFLNM 150
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
G D FN ++ L ++ RV++A +++ + DT T+N ++ +
Sbjct: 151 HEHGCFQDLASFNTILDVLCKSKRVEKAYELFRA--LRGRFSADTVTYNVIVNGWCLIKR 208
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
KA VL+EM PN+ T++ +L+ F+ G+ + L+ + K + +D+ T
Sbjct: 209 TPKALEVLKEMVD-RGINPNLTTYNTMLQGFFRAGQIRQAWEFFLE--MKKRNCEIDVVT 265
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEAVM 512
YT V+HG A + + +F EMI + P T + + K+ + +A E ++
Sbjct: 266 YTTVVHGFGVAGEIKRTRNVFDEMIREGVLPSVATYNAFIQVLCKKDSVENAVVMFEEMV 325
Query: 513 KK 514
+K
Sbjct: 326 RK 327
>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 774
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 192/390 (49%), Gaps = 38/390 (9%)
Query: 133 SSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTF 191
+S +Y+ ++ L K ++++ LLEEM G + ++T V+ + + +
Sbjct: 242 NSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLV 301
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELAR---------------------------- 223
D + G N T +L++ LC+ GKV+ A+
Sbjct: 302 DRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTPNDVHFTILINGYVKSGRLD 361
Query: 224 --SVFL---ELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTI 278
+ FL +K+ P+ TFN IHG CK + A + +M +GC P +I+Y+T+
Sbjct: 362 EANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTL 421
Query: 279 IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
+ +C++ + +L+EM A+G N++ Y ++ L K+G +A+ + +M G
Sbjct: 422 LDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGC 481
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
KPD FN LI+ L + R ++A+ +Y+ +M +GV +T T+NT+I F G ++A
Sbjct: 482 KPDIFTFNTLIFGLCKVDRKEDALALYR-DMLLDGVIANTVTYNTLIHAFLRGGAIQEAL 540
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
++ +M C + T++ L+K+ K G T++ L L D+MV K + +I+ L+I
Sbjct: 541 KLVNDM-LFRGCPLDEITYNGLIKAFCKLGATEKALG-LFDEMVRKDLVPSNISC-NLLI 597
Query: 459 HGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+GLCR K A L ++MI + P T
Sbjct: 598 NGLCRVGKVCNALELLRDMIHRGLAPDVVT 627
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 180/371 (48%), Gaps = 16/371 (4%)
Query: 113 DWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIA 172
D +++ IF+WAGS GY H+ ++Y +++D LG ++ + LL ++ + I ++
Sbjct: 81 DVSTSMAIFQWAGSQKGYCHTFDVYHVLIDKLGAAKEFKVIDKLLLQIKEEGIAFRESLF 140
Query: 173 K-VMRRFSGAGQWEDAVRTF-DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK 230
+M+ + A A R D G + E ++ N++LD L +A +VF E+
Sbjct: 141 ICIMKYYGRANLPGQATRMLLDMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEML 200
Query: 231 S-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFS 289
S + P +TF + + C +N VD A +++M HGC P + Y T+I + ++ +
Sbjct: 201 SKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVN 260
Query: 290 KVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
+ +LL+EM GC P+V T+ V+ L + E ++ ++M G P+ + L+
Sbjct: 261 EALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLM 320
Query: 350 YTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH 409
L R +V EA + ++P P+ F +I + G ++A L +
Sbjct: 321 NGLCRVGKVDEAQVLLN-KVP----TPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNG 375
Query: 410 CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVN---KHHLSLDITTYTLVIHGLCRANK 466
C+P+V TF+ L+ K G + DMVN + + ++ TYT ++ G C+ N+
Sbjct: 376 CRPDVFTFNTLIHGLCKKGLMGSAV-----DMVNDMSANGCTPNLITYTTLLDGFCKKNQ 430
Query: 467 CEWAYLLFKEM 477
E A + EM
Sbjct: 431 LEEAGYVLNEM 441
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 104/432 (24%), Positives = 189/432 (43%), Gaps = 19/432 (4%)
Query: 2 ICHLQKYLKQARIPLNPLTSRIRFHSSSENCSHIVSSSPIESYCSDGARLDHHQVLCVDS 61
+C L + + A+ L R+ F + N I + C G ++D QVL
Sbjct: 288 LCRLNRIHEGAK-----LVDRMLFRGFTPN--DITYGVLMNGLCRVG-KVDEAQVLLNKV 339
Query: 62 PRLPDI--DVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSA 117
P D+ ++I+ DE L + N +P + N LIH K SA
Sbjct: 340 PTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSA 399
Query: 118 LGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMR 176
+ + S G + Y ++D K Q+++ +L EMS KG + + ++R
Sbjct: 400 VDMVNDM-SANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLR 458
Query: 177 RFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPP 235
G+ A+ E+ G + + T N L+ LCK + E A +++ + L +
Sbjct: 459 ALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIA 518
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
N T+N IH + + + EA + +M GC I+Y+ +I+++C+ K L
Sbjct: 519 NTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLF 578
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
DEM + P+ ++ +++ L + G A+ + M G PD +N LI L +
Sbjct: 579 DEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKM 638
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHC-KPNV 414
++EA ++ ++ G+ PD T+NT+I G + A+ +L + +E+ PN
Sbjct: 639 GNIREAFNLFN-KLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLL--LRGVENAFIPND 695
Query: 415 QTFHPLLKSCFK 426
T++ L+ + K
Sbjct: 696 VTWYILVSNFIK 707
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 77/162 (47%), Gaps = 7/162 (4%)
Query: 170 TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV----ELARSV 225
T +++ F G E A+ FDE+ L + + NLL++ LC+ GKV EL R +
Sbjct: 557 TYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDM 616
Query: 226 FLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQ 285
+ + P+ T+N I+G CK+ + EA +++ G P I+Y+T+I +CR
Sbjct: 617 ---IHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRA 673
Query: 286 YNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
F Y LL PN VT+ ++S K E I
Sbjct: 674 GMFDDAYLLLLRGVENAFIPNDVTWYILVSNFIKEIGKENGI 715
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 111/251 (44%), Gaps = 8/251 (3%)
Query: 257 QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSY 316
QW + KG+ CH + Y +I F + +LL +++ +G + +M Y
Sbjct: 90 QWAGSQ-KGY-CHTFDV-YHVLIDKLGAAKEFKVIDKLLLQIKEEGIAFRESLFICIMKY 146
Query: 317 LAKSGDFEEAIRITEKMK-IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
++ +A R+ MK + +P + +N ++ L A+ A V+ EM GV
Sbjct: 147 YGRANLPGQATRMLLDMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFY-EMLSKGVI 205
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS 435
P TF ++ + A +L +M K C PN + L+ + K + +E L
Sbjct: 206 PTVYTFGVVMKALCMVNEVDNACSLLRDMTK-HGCVPNSVVYQTLIHALSKRDRVNEAL- 263
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE 495
+LL++M L D+ T+ VI+GLCR N+ L M+ TP T ++++
Sbjct: 264 KLLEEMFLMGCLP-DVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNG 322
Query: 496 VKQKHMYDAAE 506
+ + D A+
Sbjct: 323 LCRVGKVDEAQ 333
>gi|186495472|ref|NP_177628.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|133778904|gb|ABO38792.1| At1g74900 [Arabidopsis thaliana]
gi|332197524|gb|AEE35645.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 453
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 186/369 (50%), Gaps = 6/369 (1%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSC-PGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM 160
LVN ++ R + AL F + + Y H + +++ +DI ++ + +L+ M
Sbjct: 58 LVNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRM 117
Query: 161 SKGHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV 219
I + T A V R++ AG+ + AV+ F + G ++ + N +LD LCK +V
Sbjct: 118 RSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRV 177
Query: 220 ELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
E A +F L+ + T+N+ ++GWC I R +A ++EM G +P + +Y+T++
Sbjct: 178 EKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTML 237
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
+ + R +E EM+ + C +VVTYTTV+ +G+ + A + ++M G
Sbjct: 238 KGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVL 297
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
P +N +I L + V+ AV +++ EM G P+ +T+N +I H G +
Sbjct: 298 PSVATYNAMIQVLCKKDNVENAVVMFE-EMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEE 356
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIH 459
+++ M E C+PN QT++ +++ + + ++ L L + M + L ++ TY ++I
Sbjct: 357 LMQRMEN-EGCEPNFQTYNMMIRYYSECSEVEKALG-LFEKMGSGDCLP-NLDTYNILIS 413
Query: 460 GLCRANKCE 468
G+ + E
Sbjct: 414 GMFVRKRSE 422
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 102/216 (47%), Gaps = 1/216 (0%)
Query: 148 RQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN 207
R + L E + +G L T +++ F AGQ A F E+ E + T
Sbjct: 210 RTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYT 269
Query: 208 LLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
++ G+++ AR+VF E+ + + P+ T+N I CK + V+ A +EM
Sbjct: 270 TVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRR 329
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
G P V +Y+ +I+ FS+ EL+ M+ +GC PN TY ++ Y ++ + E+A
Sbjct: 330 GYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKA 389
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
+ + EKM P+ +N LI + R ++ V
Sbjct: 390 LGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMV 425
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 123/261 (47%), Gaps = 5/261 (1%)
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
I P+ TF I + + D+A M HGC + S++TI+ C+ K Y
Sbjct: 122 IGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAY 181
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
EL ++ + + VTY +++ +A+ + ++M G P+ +N ++
Sbjct: 182 ELFRALRGR-FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGF 240
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
RA +++ A + + +EM + D T+ T++ F G ++A +V +EM + E P
Sbjct: 241 FRAGQIRHA-WEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIR-EGVLP 298
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
+V T++ +++ K + + + ++MV + + ++TTY ++I GL A +
Sbjct: 299 SVATYNAMIQVLCKKDNVENAVV-MFEEMVRRGY-EPNVTTYNVLIRGLFHAGEFSRGEE 356
Query: 473 LFKEMIGHDITPRYQTCRLIL 493
L + M P +QT +++
Sbjct: 357 LMQRMENEGCEPNFQTYNMMI 377
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 114/242 (47%), Gaps = 6/242 (2%)
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
S+ I R + V+ L+ M++ P+ T+ V A +G ++A+++ M
Sbjct: 93 SFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNM 152
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
G D FN ++ L ++ RV++A +++ V DT T+N ++ +
Sbjct: 153 HEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSV--DTVTYNVILNGWCLIKR 210
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
KA VL+EM + PN+ T++ +LK F+ G+ L+ + K +D+ T
Sbjct: 211 TPKALEVLKEMVE-RGINPNLTTYNTMLKGFFRAGQIRHAWEFFLE--MKKRDCEIDVVT 267
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEAVM 512
YT V+HG A + + A +F EMI + P T ++ + K+ ++ +A E ++
Sbjct: 268 YTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMV 327
Query: 513 KK 514
++
Sbjct: 328 RR 329
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 121/261 (46%), Gaps = 13/261 (4%)
Query: 258 WT-IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSY 316
W+ I M+ P +++ + + Y K +L M GC ++ ++ T++
Sbjct: 111 WSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDV 170
Query: 317 LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
L KS E+A + ++ S D+ +N ++ R +A+ V + EM E G+ P
Sbjct: 171 LCKSKRVEKAYELFRALRGRFS-VDTVTYNVILNGWCLIKRTPKALEVLK-EMVERGINP 228
Query: 377 DTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQ 436
+ +T+NTM+ F G A+ EM K + C+ +V T+ ++ G+
Sbjct: 229 NLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRD-CEIDVVTYTTVVHGFGVAGEIKRA-RN 286
Query: 437 LLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV 496
+ D+M+ + L + TY +I LC+ + E A ++F+EM+ P T +++
Sbjct: 287 VFDEMIREGVLP-SVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLI--- 342
Query: 497 KQKHMYDAAE--KIEAVMKKL 515
+ ++ A E + E +M+++
Sbjct: 343 --RGLFHAGEFSRGEELMQRM 361
>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/410 (27%), Positives = 182/410 (44%), Gaps = 45/410 (10%)
Query: 113 DWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTI- 171
D +++ +F+WAG+ GY H ++Y M++D LG + ALL +M + IV ++
Sbjct: 108 DVPTSMELFQWAGTQKGYCHMFDVYYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLF 167
Query: 172 AKVMRRFSGAGQWEDAVRTF-DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK 230
+M+ + AG A R D G + E + N++LD L ++ +VF E+
Sbjct: 168 ILIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEML 227
Query: 231 S-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQS-------- 281
S I P +TF + + C +N VD A +++M HGC P I Y T+I +
Sbjct: 228 SKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVN 287
Query: 282 ---------------------------YCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
C+ + +L+D M +G PN TY +M
Sbjct: 288 EVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLM 347
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
L + G +EA + K+ P+ FN LI R+ EA V M G
Sbjct: 348 HGLCRMGKVDEARMLLNKV----PNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGC 403
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
PD T+NT+I G+ A ++ EM +++ C+PNV T+ L+ K G+ +E
Sbjct: 404 GPDIFTYNTLILGLCKKGYLVSARELMNEM-QIKGCEPNVITYTILIDRFCKEGRLEEA- 461
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
+LD+M K L+L+ Y +I LC+ K + A +F +M P
Sbjct: 462 RNVLDEMSGK-GLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKP 510
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 191/380 (50%), Gaps = 11/380 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAV 188
G+ +S Y +++ L ++ ++D+ R LL ++ ++V NT+ + + G+ ++A
Sbjct: 335 GFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTL---INGYVSRGRLDEAK 391
Query: 189 RTFDE-LGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIH 245
E + + G + T N L+ LCK+G + AR + +++K C PN T+ I I
Sbjct: 392 AVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGC-EPNVITYTILID 450
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
+CK R++EA+ + EM G G + Y+ +I + C+ + +M ++GC P
Sbjct: 451 RFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKP 510
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
++ T+ +++ L K FEEA+ + + M + G ++ +N LI+ R +QEA+ +
Sbjct: 511 DIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLV 570
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
+M G D T+N +I G+ EK + E+M + PN + + L+
Sbjct: 571 N-DMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMS-KGLNPNNISCNILINGLC 628
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
+TG L + L DM+++ L+ DI TY +I+GLC+ + + A LF ++ I P
Sbjct: 629 RTGNIQHAL-EFLRDMIHRG-LTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPD 686
Query: 486 YQTCRLILDEVKQKHMYDAA 505
T ++ ++ M+D A
Sbjct: 687 AITYNTLISWHCKEGMFDDA 706
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 166/324 (51%), Gaps = 7/324 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ L K + R L+ EM KG + T ++ RF G+ E+A DE+
Sbjct: 410 YNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMS 469
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRV 253
GL N N L+ LCK+ KV+ A ++F ++ K C P+ TFN I G CK+N+
Sbjct: 470 GKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGC-KPDIFTFNSLIFGLCKVNKF 528
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
+EA Q+M G I+Y+T+I ++ R+ + +L+++M +GCP + +TY +
Sbjct: 529 EEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGL 588
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
+ L ++G+ E+ + + E M G P++ N LI L R +Q A+ + +M G
Sbjct: 589 IKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLR-DMIHRG 647
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
+ PD T+N++I G ++A ++ +++ ++E P+ T++ L+ K G D+
Sbjct: 648 LTPDIVTYNSLINGLCKTGRAQEALNLFDKL-QVEGICPDAITYNTLISWHCKEGMFDDA 706
Query: 434 LSQLLDDMVNKHHLSLDITTYTLV 457
LL V+ + ++T Y LV
Sbjct: 707 -HLLLSRGVDSGFIPNEVTWYILV 729
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 150/303 (49%), Gaps = 6/303 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAK--VMRRFSGAGQWED 186
G E + Y +++D K ++++ R +L+EMS G + LN + ++ + +D
Sbjct: 437 GCEPNVITYTILIDRFCKEGRLEEARNVLDEMS-GKGLALNAVGYNCLISALCKDEKVQD 495
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIH 245
A+ F ++ + G + + T N L+ LCK K E A ++ + L + N T+N IH
Sbjct: 496 ALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIH 555
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
+ + + EA + +M GC I+Y+ +I++ CR N K L ++M ++G P
Sbjct: 556 AFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNP 615
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N ++ +++ L ++G+ + A+ M G PD +N LI L + R QEA+ ++
Sbjct: 616 NNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLF 675
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
++ G+ PD T+NT+I+ G + A H+L PN T++ L+ +
Sbjct: 676 D-KLQVEGICPDAITYNTLISWHCKEGMFDDA-HLLLSRGVDSGFIPNEVTWYILVSNFI 733
Query: 426 KTG 428
K G
Sbjct: 734 KEG 736
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 81/160 (50%), Gaps = 4/160 (2%)
Query: 166 VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSV 225
+T N + K + R AG E + F+++ + GL N + N+L++ LC+ G ++ A
Sbjct: 583 ITYNGLIKALCR---AGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEF 639
Query: 226 FLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCR 284
++ + P+ T+N I+G CK R EA +++ G P I+Y+T+I +C+
Sbjct: 640 LRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCK 699
Query: 285 QYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
+ F + LL G PN VT+ ++S K GD E
Sbjct: 700 EGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 739
>gi|115455503|ref|NP_001051352.1| Os03g0761300 [Oryza sativa Japonica Group]
gi|14488357|gb|AAK63924.1|AC084282_5 unknown protein [Oryza sativa Japonica Group]
gi|108711214|gb|ABF99009.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549823|dbj|BAF13266.1| Os03g0761300 [Oryza sativa Japonica Group]
gi|125545804|gb|EAY91943.1| hypothetical protein OsI_13630 [Oryza sativa Indica Group]
gi|125588003|gb|EAZ28667.1| hypothetical protein OsJ_12678 [Oryza sativa Japonica Group]
Length = 484
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/400 (24%), Positives = 188/400 (47%), Gaps = 15/400 (3%)
Query: 90 DHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWA-----GSCPGYEHSSEIYEMMVDIL 144
DH + P + +++ R + A F WA G C H+ Y +V L
Sbjct: 57 DHSGVRVTPD--VAERVLERLDNAGMLAYRFFEWARRQKRGGCA---HTVRSYHTVVASL 111
Query: 145 GKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTE 204
K+RQ M ++ M + V + T +MR+++ A + ++AV TF+ + +G+ N
Sbjct: 112 AKIRQYQLMWDVVAVMRREGAVNVETFGIIMRKYARAQKVDEAVYTFNVMEKYGVVPNLA 171
Query: 205 TMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
N LL LCK V A+ +F ++ S P+A T++I + GW + + + + EM
Sbjct: 172 AFNSLLGALCKSKNVRKAQEIFDKMNSRFSPDAKTYSILLEGWGRAPNLPKMREVYSEML 231
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
GC P +++Y ++ S C+ + ++ +M ++GC P Y+ ++ E
Sbjct: 232 DAGCEPDIVTYGIMVDSLCKTGRVEEAVRVVQDMTSRGCQPTTYIYSVLVHTYGVEMRIE 291
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTM 384
+A+ M+ G PD +N L+ +A + + A V +M +G+ ++ T+N +
Sbjct: 292 DAVATFLDMEKDGIVPDIVVYNALVSAFCKAKKFENAFRVLN-DMEGHGITTNSRTWNII 350
Query: 385 ITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK 444
+ G ++A+ V M K C+P+ T+ ++K + K + L ++ M K
Sbjct: 351 LNHLISLGRDDEAYKVFRRMIKC--CQPDCDTYTMMIKMFCENDKVEMAL-KVWKYMRLK 407
Query: 445 HHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
L + T++++I+GLC + A +L ++MI I P
Sbjct: 408 QFLP-SMHTFSVLINGLCDKREVSQACVLLEDMIEKGIRP 446
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 103/213 (48%), Gaps = 1/213 (0%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDA 187
G + ++ IY ++V G +++ A +M K IV + ++ F A ++E+A
Sbjct: 269 GCQPTTYIYSVLVHTYGVEMRIEDAVATFLDMEKDGIVPDIVVYNALVSAFCKAKKFENA 328
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGW 247
R +++ G+ N+ T N++L+ L G+ + A VF + C P+ T+ + I +
Sbjct: 329 FRVLNDMEGHGITTNSRTWNIILNHLISLGRDDEAYKVFRRMIKCCQPDCDTYTMMIKMF 388
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
C+ ++V+ A + M+ P + ++S +I C + S+ LL++M +G P
Sbjct: 389 CENDKVEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKREVSQACVLLEDMIEKGIRPPG 448
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
T+ + L K G + + EKM I+ +P
Sbjct: 449 STFGKLRQLLLKEGRKDVLDFLVEKMNILIQEP 481
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 178/360 (49%), Gaps = 6/360 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++D L K ++ LL EM +G + T + ++ F G +A F+E+
Sbjct: 235 YTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMV 294
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
+ NT T +L+D LCKEG V AR VF + K PNA+T+N + G+C N++D
Sbjct: 295 GRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMD 354
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EAQ + M GC P V SY+ +I YC++ + LL EM + P+ VTY+T+M
Sbjct: 355 EAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLM 414
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
L + G +EA+ + ++M G PD ++ L+ L + + EA+ + + M E+ +
Sbjct: 415 QGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLK-SMQESKI 473
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
PD +N +I G E A + ++ + +P ++T+ ++K K G +DE
Sbjct: 474 EPDIVLYNILIEGMFIAGKLEVAKELFSKLFA-DGIQPTIRTYTIMIKGLLKEGLSDEAY 532
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
+L M + L + +Y ++I G + A L EM+G + T +++LD
Sbjct: 533 -ELFRKMEDDGFLP-NSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLLD 590
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 172/377 (45%), Gaps = 42/377 (11%)
Query: 177 RFSGA----GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KS 231
RF G+ Q+ V +++ FG+ N ++N+L++ LC+ V A SV ++ K
Sbjct: 97 RFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISVLGKMFKL 156
Query: 232 CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKV 291
I P+A TFN I+G C + EA EM G P VISYST+I C+ N S
Sbjct: 157 GIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMA 216
Query: 292 YELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYT 351
+LL +M+ +GC PN+V YTT++ L K +A+ + +M G PD ++ +++
Sbjct: 217 LQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHG 276
Query: 352 LGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCK 411
+ EA ++ EM V P+T TF ++ G +A V E M K + +
Sbjct: 277 FCSLGHLNEATILFN-EMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTK-KGAE 334
Query: 412 PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK--------------------------- 444
PN T++ L+ + DE ++LD MV+K
Sbjct: 335 PNAYTYNALMDGYCLNNQMDEA-QKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKS 393
Query: 445 -------HHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVK 497
L+ D TY+ ++ GLC+ + + A LFKEM + P T +LD +
Sbjct: 394 LLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLC 453
Query: 498 QKHMYDAAEKIEAVMKK 514
+ D A K+ M++
Sbjct: 454 KHGHLDEALKLLKSMQE 470
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 169/356 (47%), Gaps = 6/356 (1%)
Query: 155 ALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTL 213
L EM +GH + + + V+ +G A++ ++ G + N ++D+L
Sbjct: 183 GLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSL 242
Query: 214 CKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCV 272
CK+ V A + E+ IPP+ T++ +HG+C + ++EA EM G P
Sbjct: 243 CKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNT 302
Query: 273 ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEK 332
++++ ++ C++ S+ + + M +G PN TY +M + +EA ++ +
Sbjct: 303 VTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDI 362
Query: 333 MKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
M G P +N LI + R+ EA + VEM E + PDT T++T++ G
Sbjct: 363 MVDKGCAPVVHSYNILINGYCKRRRLDEAKSLL-VEMSEKELTPDTVTYSTLMQGLCQVG 421
Query: 393 HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
++A ++ +EM P++ T+ LL K G DE L +LL M + + DI
Sbjct: 422 RPQEALNLFKEMCS-SGLLPDLMTYSTLLDGLCKHGHLDEAL-KLLKSM-QESKIEPDIV 478
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
Y ++I G+ A K E A LF ++ I P +T +++ + ++ + D A ++
Sbjct: 479 LYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYEL 534
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 130/263 (49%), Gaps = 5/263 (1%)
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
+D+A + M P V+ + + S ++ +S V L ++M G NV +
Sbjct: 73 IDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNI 132
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN 372
+++ L + AI + KM +G +PD+ FN LI ++EAV ++ EM
Sbjct: 133 LINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFN-EMVRR 191
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
G PD +++T+I G+ A +L +M + + CKPN+ + ++ S K ++
Sbjct: 192 GHQPDVISYSTVINGLCKSGNTSMALQLLRKMEE-KGCKPNLVAYTTIIDSLCKDTLVND 250
Query: 433 CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLI 492
+ LL +MV++ + D+ TY+ ++HG C A +LF EM+G ++ P T ++
Sbjct: 251 AM-DLLSEMVDRG-IPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTIL 308
Query: 493 LDEVKQKHMYDAAEKI-EAVMKK 514
+D + ++ M A + EA+ KK
Sbjct: 309 VDGLCKEGMVSEARCVFEAMTKK 331
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 119/278 (42%), Gaps = 4/278 (1%)
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYEL 294
P+ F F+ K + +M G V S + +I CR + +
Sbjct: 90 PSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISV 149
Query: 295 LDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGR 354
L +M G P+ +T+ T+++ G+ +EA+ + +M G +PD ++ +I L +
Sbjct: 150 LGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCK 209
Query: 355 ASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNV 414
+ A+ + + +M E G P+ + T+I A +L EM P+V
Sbjct: 210 SGNTSMALQLLR-KMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVD-RGIPPDV 267
Query: 415 QTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLF 474
T+ +L G +E + L ++MV ++ + + T+T+++ GLC+ A +F
Sbjct: 268 VTYSTILHGFCSLGHLNEA-TILFNEMVGRNVMP-NTVTFTILVDGLCKEGMVSEARCVF 325
Query: 475 KEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
+ M P T ++D + D A+K+ +M
Sbjct: 326 EAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIM 363
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 177/360 (49%), Gaps = 9/360 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +++D L K + D+ +L EM +G T +M AG++E A +
Sbjct: 13 YNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMA 72
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVD 254
+ T N L+ LCK+ V+ A+++ E + S P+ T++I G CK R+D
Sbjct: 73 ERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRID 132
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA ++EM G+GC P +++Y+T+I C+ K YELL+ + + G P+VVTYT ++
Sbjct: 133 EAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIV 192
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
L K G ++A+++ E M G P + L+ L R RV EA ++++ EM
Sbjct: 193 DGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFK-EMVSKDC 251
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
D + +++ + ++A V++ + P + ++ L+ K G+ DE +
Sbjct: 252 TADALAYVSLVNGYCKSSRTKEAQKVVDGIRG----TPYIDVYNALMDGYCKEGRLDE-I 306
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
+ +DM + + +I TY +V+ GLC+ K + A+ + M P + +I+D
Sbjct: 307 PNVFEDMACRGCVP-NIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIID 365
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 184/382 (48%), Gaps = 10/382 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++D L K + ++ LLE + S G + + T ++ G+ + A++ + +
Sbjct: 153 YNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGML 212
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRV 253
G + T L++ LC+ G+V+ A +F E+ K C +A + ++G+CK +R
Sbjct: 213 KRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDC-TADALAYVSLVNGYCKSSRT 271
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
EAQ + ++G P + Y+ ++ YC++ ++ + ++M +GC PN+ TY V
Sbjct: 272 KEAQKVVDGIRGT---PYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIV 328
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
M L K G +EA E M G PD +N +I L +AS+ +EA V +M + G
Sbjct: 329 MDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLD-QMIQAG 387
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
+ PD T+NT++ F + A +L+ M K P+ T++ L+ +T + +
Sbjct: 388 IPPDAVTYNTLMAQFCKEERFDDAVGILKNMIK-AGVDPDNVTYNTLISGLSQTNRLGDA 446
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
+L+ +M+ + TTY +I LC+ + A LL M GH + T + +
Sbjct: 447 Y-ELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFI 505
Query: 494 DEVKQKHMYDAAEKIEAVMKKL 515
D + ++ D A + + M L
Sbjct: 506 DRLCKEGRLDEASSLLSEMDTL 527
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 163/313 (52%), Gaps = 13/313 (4%)
Query: 207 NLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
N L+D CKEG+++ +VF ++ + C+P N T+NI + G CK +VDEA ++ M
Sbjct: 291 NALMDGYCKEGRLDEIPNVFEDMACRGCVP-NIKTYNIVMDGLCKHGKVDEAFPFLESMH 349
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
GC P V+SY+ II + + ++LD+M G PP+ VTY T+M+ K F+
Sbjct: 350 SAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFD 409
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG-VAPDTSTFNT 383
+A+ I + M G PD+ +N LI L + +R+ +A Y EM NG V +T+NT
Sbjct: 410 DAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDA-YELMHEMLRNGCVVSACTTYNT 468
Query: 384 MITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVN 443
+I G ++A +++ M + N T++ + K G+ DE S LL +M
Sbjct: 469 IIDRLCKEGCLKQALLLMDHMTG-HGVEANTVTYNIFIDRLCKEGRLDEA-SSLLSEMDT 526
Query: 444 KHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG-HDITPRYQTCRLILDE-VKQKHM 501
D +YT VI GLC+A + + A L +EM+ + T L++D K K +
Sbjct: 527 LR----DEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRL 582
Query: 502 YDAAEKIEAVMKK 514
+A +E ++++
Sbjct: 583 DEALTLLELMVQR 595
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 137/267 (51%), Gaps = 5/267 (1%)
Query: 205 TMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
T N+L+D LCK K + A + E+ + P+ TFN + G CK + + A + M
Sbjct: 12 TYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVM 71
Query: 264 KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF 323
C P +Y+T+I C+Q N + L+DE + G P+VVTY+ + L K G
Sbjct: 72 AERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRI 131
Query: 324 EEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNT 383
+EA + ++M G P+ +N LI L +AS+ ++A + + + +G PD T+
Sbjct: 132 DEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLET-LVSSGFVPDVVTYTI 190
Query: 384 MITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVN 443
++ G +KA ++E M K C P+V T+ L++ +TG+ DE + +MV+
Sbjct: 191 IVDGLCKEGRLDKALKMVEGMLK-RGCTPSVITYTALMEGLCRTGRVDEA-HHIFKEMVS 248
Query: 444 KHHLSLDITTYTLVIHGLCRANKCEWA 470
K + D Y +++G C++++ + A
Sbjct: 249 K-DCTADALAYVSLVNGYCKSSRTKEA 274
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 131/252 (51%), Gaps = 4/252 (1%)
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
+ P+ T+NI I G CK ++ D+A + EM G P +++++I+ C+ F + +
Sbjct: 6 VAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAH 65
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
LL M + C P+ TY T++S L K + + A + ++ G PD ++ L L
Sbjct: 66 SLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGL 125
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
+ R+ EA + + EM NG P+ T+NT+I EKA+ +LE + P
Sbjct: 126 CKRGRIDEAFELVK-EMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFV-P 183
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
+V T+ ++ K G+ D+ L ++++ M+ K + + TYT ++ GLCR + + A+
Sbjct: 184 DVVTYTIIVDGLCKEGRLDKAL-KMVEGML-KRGCTPSVITYTALMEGLCRTGRVDEAHH 241
Query: 473 LFKEMIGHDITP 484
+FKEM+ D T
Sbjct: 242 IFKEMVSKDCTA 253
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 187/395 (47%), Gaps = 12/395 (3%)
Query: 126 SCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQW 184
+C G + + Y +++D L K ++D+ LE M S G + + + ++ A +
Sbjct: 314 ACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKP 373
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIF 243
++A + D++ G+ + T N L+ CKE + + A + + K+ + P+ T+N
Sbjct: 374 KEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTL 433
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGC--HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ 301
I G + NR+ +A + EM +GC C +Y+TII C++ + L+D M
Sbjct: 434 ISGLSQTNRLGDAYELMHEMLRNGCVVSACT-TYNTIIDRLCKEGCLKQALLLMDHMTGH 492
Query: 302 GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
G N VTY + L K G +EA + +M + D + +I L +A ++ A
Sbjct: 493 GVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTL---RDEVSYTTVIIGLCKAEQLDRA 549
Query: 362 VYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLL 421
+ + + G+ + TFN +I F+ ++A +LE M + C P+V T++ ++
Sbjct: 550 SKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQ-RGCSPSVITYNMVI 608
Query: 422 KSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHD 481
K K D+ +L D+M + ++ ++ YT++I+GLC + + A + +EM D
Sbjct: 609 TCLCKLDKVDKAW-ELFDEMAVRGIVASSVS-YTVLIYGLCGQGRGKEALQVLEEMASSD 666
Query: 482 ITPRYQTCR-LILDEVKQKHMYDAAEKIEAVMKKL 515
CR L L Q +AAE + + K+
Sbjct: 667 CEIDDLKCRKLYLALRGQGRGEEAAELLRRMTTKM 701
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 160/361 (44%), Gaps = 20/361 (5%)
Query: 54 HQVLCVDSPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRF--K 111
H CV P + ++II + S E Q L Q + I P N L+ +F +
Sbjct: 349 HSAGCV--PDVVSYNIIIDGLFKASKPKEARQVLDQ-MIQAGIPPDAVTYNTLMAQFCKE 405
Query: 112 DDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIV--TLN 169
+ + A+GI + G + + Y ++ L + ++ L+ EM + V
Sbjct: 406 ERFDDAVGILKNMIK-AGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACT 464
Query: 170 TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL 229
T ++ R G + A+ D + G+E NT T N+ +D LCKEG+++ A S+ E+
Sbjct: 465 TYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM 524
Query: 230 KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM---KGHGCHPCVIS--YSTIIQSYCR 284
+ + ++ I G CK ++D A +EM KG C+ S ++ +I ++ +
Sbjct: 525 DTL--RDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGL----CITSHTFNLLIDAFTK 578
Query: 285 QYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRF 344
+ LL+ M +GC P+V+TY V++ L K ++A + ++M + G S
Sbjct: 579 TKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVS 638
Query: 345 FNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
+ LIY L R +EA+ V + EM + D + G E+A +L M
Sbjct: 639 YTVLIYGLCGQGRGKEALQVLE-EMASSDCEIDDLKCRKLYLALRGQGRGEEAAELLRRM 697
Query: 405 N 405
Sbjct: 698 T 698
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 105/246 (42%), Gaps = 40/246 (16%)
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI 329
P V +Y+ +I C+ K E+L EM +G P+ VT+ ++M L K+G FE A +
Sbjct: 8 PDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSL 67
Query: 330 TEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFS 389
M +P +N LI L + V A + E +G PD T++ +
Sbjct: 68 LAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVD-EFVSSGFVPDVVTYSILADGLC 126
Query: 390 HHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSL 449
G ++AF +++EM+ C PN
Sbjct: 127 KRGRIDEAFELVKEMSG-NGCTPN------------------------------------ 149
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEK-I 508
+ TY +I GLC+A+K E AY L + ++ P T +I+D + ++ D A K +
Sbjct: 150 -LVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMV 208
Query: 509 EAVMKK 514
E ++K+
Sbjct: 209 EGMLKR 214
Score = 45.1 bits (105), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 41/71 (57%)
Query: 442 VNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHM 501
+N+ ++ D+ TY ++I GLC+A+K + A + EM+ +TP T I+D + +
Sbjct: 1 MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60
Query: 502 YDAAEKIEAVM 512
++ A + AVM
Sbjct: 61 FERAHSLLAVM 71
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 197/396 (49%), Gaps = 21/396 (5%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQW 184
G + ++E+Y ++ +L + ++ + + EMS I VT NT+ + R A Q
Sbjct: 156 GVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCR---ARQA 212
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIP-----PNAHT 239
AV +E+ + + + T L++ +EG +E A L LK+ + P + T
Sbjct: 213 RTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAA----LRLKARMSEMGCSPTSVT 268
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
N+ I+G+CK+ RV +A IQ+ G P +++ST + C+ + ++L M
Sbjct: 269 VNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLML 328
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
+GC P+V TY+TV++ L +G+ EEA I +M G PD+ FN LI L ++++
Sbjct: 329 QEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLE 388
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
EA+ + + E+ G++P+ TFN +I G A + EEM K C P+ T++
Sbjct: 389 EALDLAR-ELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEM-KSSGCTPDEVTYNI 446
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
L+ + +GK + L L + V+ S TY +I GLC+ + E A +F +M
Sbjct: 447 LIDNLCSSGKLAKALDLLKEMEVSGCPQS--TVTYNTIIDGLCKRRRIEEAEEVFDQMDV 504
Query: 480 HDITPRYQTCRLILDEV-KQKHMYDAAEKIEAVMKK 514
I T ++D + + + DAAE ++ ++ +
Sbjct: 505 TGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISE 540
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 181/389 (46%), Gaps = 7/389 (1%)
Query: 126 SCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVT-LNTIAKVMRRFSGAGQW 184
S G E + ++D L + RQ +LEEMS + T +M F G
Sbjct: 188 SSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSI 247
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARS-VFLELKSCIPPNAHTFNIF 243
E A+R + G + T+N+L++ CK G+V A + E+ P+ TF+ F
Sbjct: 248 EAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTF 307
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
++G C+ VD A + M GC P V +YST+I C + ++++M GC
Sbjct: 308 VNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGC 367
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
P+ T+ T++ L EEA+ + ++ + G P+ FN LI L + AV
Sbjct: 368 LPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVR 427
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
+++ EM +G PD T+N +I G KA +L+EM ++ C + T++ ++
Sbjct: 428 LFE-EMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEM-EVSGCPQSTVTYNTIIDG 485
Query: 424 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
K + +E ++ + D ++ + + T+ +I GLC A + + A L +MI +
Sbjct: 486 LCKRRRIEE--AEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQ 543
Query: 484 PRYQTCRLILDE-VKQKHMYDAAEKIEAV 511
P T IL KQ ++ AA+ ++ +
Sbjct: 544 PNNVTYNSILTHYCKQGNISKAADILQTM 572
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 116/457 (25%), Positives = 204/457 (44%), Gaps = 44/457 (9%)
Query: 98 PSHYLVNKLIHRFKDDWK--SALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMD-QMR 154
P+ VN LI+ + + ALG + G+E + V+ L + +D ++
Sbjct: 264 PTSVTVNVLINGYCKLGRVGDALGYIQQE-IADGFEPDRVTFSTFVNGLCQNGHVDHALK 322
Query: 155 ALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLC 214
L + +G + T + V+ G+ E+A +++ G +T T N L+ LC
Sbjct: 323 VLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALC 382
Query: 215 KEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI 273
E ++E A + EL + PN +TFNI I+ CK+ A +EMK GC P +
Sbjct: 383 TENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEV 442
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
+Y+ +I + C +K +LL EM+ GCP + VTY T++ L K EEA + ++M
Sbjct: 443 TYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQM 502
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
+ G ++ FN LI L A R+ +A + +M G+ P+ T+N+++T + G+
Sbjct: 503 DVTGIGRNAITFNTLIDGLCNAERIDDAAELVD-QMISEGLQPNNVTYNSILTHYCKQGN 561
Query: 394 HEKAFHVLEEMN----------------------------------KLEHCKPNVQTFHP 419
KA +L+ M +++ KP + ++P
Sbjct: 562 ISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNP 621
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANK-CEWAYLLFKEMI 478
+++S F+ + LS L +M D TY +V GLCR + A+ EM
Sbjct: 622 VIQSLFRGNNGRDALS-LFREMTEVGG-PPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMA 679
Query: 479 GHDITPRYQTCRLILDEVKQKHMYD-AAEKIEAVMKK 514
+ P + + R++ + + M D IE +++K
Sbjct: 680 DNGFIPEFSSFRMLAEGLLNLGMDDYLIRAIELIVEK 716
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 87/205 (42%), Gaps = 5/205 (2%)
Query: 313 VMSYLAKSGDFEEAIRITEKM--KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
+++ L + D E A+R+ + G P + +I LG A + + V EM
Sbjct: 59 LVTALREQADPEAALRMLNSALARDDGLTPSRDVYEEIIRKLGTAGAF-DLMKVLVGEMR 117
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKT 430
G + I ++ + AF ++ + + N + ++ LL + G
Sbjct: 118 REGHEVGLGLVQSFIGSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLL-TVLAEGSK 176
Query: 431 DECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCR 490
+ L +M + + D+ T+ VI LCRA + A L+ +EM D+ P T
Sbjct: 177 IKLLESAYTEM-SSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFT 235
Query: 491 LILDEVKQKHMYDAAEKIEAVMKKL 515
+++ ++ +AA +++A M ++
Sbjct: 236 TLMEGFVEEGSIEAALRLKARMSEM 260
>gi|115480461|ref|NP_001063824.1| Os09g0542800 [Oryza sativa Japonica Group]
gi|32526676|dbj|BAC79199.1| chloroplast RNA processing 1 -like protein [Oryza sativa Japonica
Group]
gi|113632057|dbj|BAF25738.1| Os09g0542800 [Oryza sativa Japonica Group]
gi|125606498|gb|EAZ45534.1| hypothetical protein OsJ_30195 [Oryza sativa Japonica Group]
gi|215768653|dbj|BAH00882.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 543
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 168/346 (48%), Gaps = 6/346 (1%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
+Y M+D+L K R LL+EM + + ++ I ++RR+ A +A F +
Sbjct: 146 LYAAMIDLLAKHHHFPLARHLLDEMRERSVPISAQLILALIRRYVRAEMPSEASDLFRRM 205
Query: 195 GTFGL-EKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRV 253
+G + T+ LL L K+ A+++F KS P+ + +H WC+ R+
Sbjct: 206 EEYGAGAPDPATLASLLGALSKKRLASEAQAMFDSYKSVFTPDVVLYTTLVHAWCRSGRL 265
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
+EA+ EM+ G P V +Y+ +I + R + ELL +M GCPPN T+ +
Sbjct: 266 NEAERVFAEMQQAGVTPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTATFNAI 325
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYT-LGRASRVQEAVYVYQVEMPEN 372
M K+G E+ +++ +M+ +G +PD +N L+ T G+ +A M
Sbjct: 326 MRAHVKAGRSEQVLQVHNQMRQLGCEPDIITYNFLMETHCGKGQSNLDAAMKMLTRMIAK 385
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
G PD TFN M+ + G+ A + E M +L+ CKPNV T++ LL F K+ +
Sbjct: 386 GCIPDCHTFNPMLKLVLVLGNVNAARKLYERMQELQ-CKPNVVTYN-LLMRLFNLEKSMD 443
Query: 433 CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
+ ++ DM + + ++ TY +I C + A++ +EM+
Sbjct: 444 MVLRIKKDM-DAQGVEPNVNTYAALIEAFCGRGNWKRAHMTLREMV 488
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 134/271 (49%), Gaps = 5/271 (1%)
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHT 239
+G+ +A R F E+ G+ N T ++D + + G+V A+ + ++ S PPN T
Sbjct: 262 SGRLNEAERVFAEMQQAGVTPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTAT 321
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCR--QYNFSKVYELLDE 297
FN + K R ++ +M+ GC P +I+Y+ +++++C Q N ++L
Sbjct: 322 FNAIMRAHVKAGRSEQVLQVHNQMRQLGCEPDIITYNFLMETHCGKGQSNLDAAMKMLTR 381
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
M A+GC P+ T+ ++ + G+ A ++ E+M+ + KP+ +N L+ L +
Sbjct: 382 MIAKGCIPDCHTFNPMLKLVLVLGNVNAARKLYERMQELQCKPNVVTYN-LLMRLFNLEK 440
Query: 358 VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTF 417
+ V + +M GV P+ +T+ +I F G+ ++A L EM + + KP +
Sbjct: 441 SMDMVLRIKKDMDAQGVEPNVNTYAALIEAFCGRGNWKRAHMTLREMVEEKALKPTKPVY 500
Query: 418 HPLLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
+L K G+ +L++ MV++ +S
Sbjct: 501 DMVLALLRKAGQLRRH-EELVEMMVDRGFIS 530
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 173/343 (50%), Gaps = 6/343 (1%)
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSC 232
++R + A + + F L + GL + N LL L K G V+LA ++ E+ +S
Sbjct: 33 LVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSG 92
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
+ N +T NI I+ CK +++ + + +M+ G P V++Y+T+I +YCRQ + +
Sbjct: 93 VQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAF 152
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
EL+D M +G P V TY +++ L K+G + A + ++M +G PD+ +N L+
Sbjct: 153 ELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVEC 212
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
R + +A ++ EMP GV PD +F+ +I + S +G ++A +M K P
Sbjct: 213 CRNDNMMDAERIFD-EMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDM-KNAGLAP 270
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
+ + L+ + G E L ++ D+M+ + LD+ TY +++GLC+ A
Sbjct: 271 DNVIYTILIGGFCRNGVMSEAL-KVRDEML-EQGCVLDVVTYNTILNGLCKEKMLSEADE 328
Query: 473 LFKEMIGHDITPRYQT-CRLILDEVKQKHMYDAAEKIEAVMKK 514
LF EM + P + T LI K +M A E ++++
Sbjct: 329 LFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQR 371
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 163/335 (48%), Gaps = 5/335 (1%)
Query: 161 SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVE 220
SKG V++N ++ G + A + E+ G++ N T+N++++ LCK K+E
Sbjct: 55 SKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIE 114
Query: 221 LARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
+S ++ + + P+ T+N I+ +C+ ++EA + M G G PCV +Y+ II
Sbjct: 115 NTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAII 174
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
C+ + + +LDEM G P+ TY ++ ++ + +A RI ++M G
Sbjct: 175 NGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVV 234
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
PD F+ LI L + + +A+ ++ +M G+APD + +I F +G +A
Sbjct: 235 PDLVSFSALIGLLSKNGCLDQALKYFR-DMKNAGLAPDNVIYTILIGGFCRNGVMSEALK 293
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIH 459
V +EM + + C +V T++ +L K E +L +M + D T+T +I+
Sbjct: 294 VRDEMLE-QGCVLDVVTYNTILNGLCKEKMLSEA-DELFTEMTERGVFP-DFYTFTTLIN 350
Query: 460 GLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
G + A LF+ MI ++ P T ++D
Sbjct: 351 GYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLID 385
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 134/270 (49%), Gaps = 3/270 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +++ L K + + + L EM+ +G T ++ +S G AV F+ +
Sbjct: 310 YNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMI 369
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVD 254
L+ + T N L+D CK ++E ++ ++ S I PN ++ I I+G+C + V
Sbjct: 370 QRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVS 429
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA EM G +I+ +TI++ YCR N K E L M +G P+ +TY T++
Sbjct: 430 EAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLI 489
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
+ K + + A + KM+ G PD +N ++ R R+QEA + ++M E GV
Sbjct: 490 NGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELI-MLKMIERGV 548
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
PD ST+ ++I + ++AF V +EM
Sbjct: 549 NPDRSTYTSLINGHVTQNNLKEAFRVHDEM 578
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 159/327 (48%), Gaps = 11/327 (3%)
Query: 186 DAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFI 244
DA R FDE+ + G+ + + + L+ L K G ++ A F ++K+ + P+ + I I
Sbjct: 220 DAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILI 279
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
G+C+ + EA EM GC V++Y+TI+ C++ S+ EL EM +G
Sbjct: 280 GGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVF 339
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
P+ T+TT+++ +K G+ +A+ + E M KPD +N LI + S +++ +
Sbjct: 340 PDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNEL 399
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
+ +M + P+ ++ +I + + G +AF + +EM + + + + T + ++K
Sbjct: 400 WN-DMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVE-KGFEATIITCNTIVKGY 457
Query: 425 FKTG---KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHD 481
+ G K DE LS +L + D TY +I+G + + A+ L +M
Sbjct: 458 CRAGNAVKADEFLSNML-----LKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSG 512
Query: 482 ITPRYQTCRLILDEVKQKHMYDAAEKI 508
+ P T +IL+ ++ AE I
Sbjct: 513 LLPDVITYNVILNGFSRQGRMQEAELI 539
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 169/352 (48%), Gaps = 10/352 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVM-RRFSGAGQWEDAVRTFDELG 195
+ ++ +L K +DQ +M + N I ++ F G +A++ DE+
Sbjct: 240 FSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEML 299
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
G + T N +L+ LCKE + A +F E+ + + P+ +TF I+G+ K ++
Sbjct: 300 EQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMN 359
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
+A + M P V++Y+T+I +C+ KV EL ++M ++ PN ++Y ++
Sbjct: 360 KAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILI 419
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
+ G EA R+ ++M G + N ++ RA +A + M G+
Sbjct: 420 NGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADE-FLSNMLLKGI 478
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCK--PNVQTFHPLLKSCFKTGKTDE 432
PD T+NT+I F + ++AF ++ NK+E+ P+V T++ +L + G+ E
Sbjct: 479 VPDGITYNTLINGFIKEENMDRAFALV---NKMENSGLLPDVITYNVILNGFSRQGRMQE 535
Query: 433 CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
++L+ + + ++ D +TYT +I+G N + A+ + EM+ P
Sbjct: 536 --AELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVP 585
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 121/273 (44%), Gaps = 13/273 (4%)
Query: 78 SSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDD--WKSALGIFRWAGSCPGYEHSSE 135
S DE+F + + + P Y LI+ + D A+ +F +
Sbjct: 324 SEADELFTEMTE----RGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQ-RNLKPDVV 378
Query: 136 IYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAK--VMRRFSGAGQWEDAVRTFDE 193
Y ++D K +M+++ L +M I N I+ ++ + G +A R +DE
Sbjct: 379 TYNTLIDGFCKGSEMEKVNELWNDMISRRIYP-NHISYGILINGYCNMGCVSEAFRLWDE 437
Query: 194 LGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE--LKSCIPPNAHTFNIFIHGWCKIN 251
+ G E T N ++ C+ G A FL L I P+ T+N I+G+ K
Sbjct: 438 MVEKGFEATIITCNTIVKGYCRAGNAVKADE-FLSNMLLKGIVPDGITYNTLINGFIKEE 496
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
+D A + +M+ G P VI+Y+ I+ + RQ + ++ +M +G P+ TYT
Sbjct: 497 NMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYT 556
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRF 344
++++ + +EA R+ ++M G PD +F
Sbjct: 557 SLINGHVTQNNLKEAFRVHDEMLQRGFVPDDKF 589
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 80/179 (44%), Gaps = 6/179 (3%)
Query: 337 GSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEK 396
GS P F+ L+ T +A +++E ++V + G+ + N+++ G +
Sbjct: 24 GSNP--LVFDLLVRTYVQARKLREGCEAFRV-LKSKGLCVSINACNSLLGGLVKVGWVDL 80
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTL 456
A+ + +E+ + + NV T + ++ + K K + S L DM K D+ TY
Sbjct: 81 AWEIYQEVVR-SGVQVNVYTLNIMINALCKNQKIENTKS-FLSDMEEKGVFP-DVVTYNT 137
Query: 457 VIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
+I+ CR E A+ L M G + P T I++ + + Y A+ + M K+
Sbjct: 138 LINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKI 196
>gi|125526118|gb|EAY74232.1| hypothetical protein OsI_02112 [Oryza sativa Indica Group]
Length = 556
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 176/359 (49%), Gaps = 15/359 (4%)
Query: 168 LNTIAKVMRRFSGAGQWEDAVRTFDEL--------GTFGLEKNTETMNLLLDTLCKEGKV 219
L A ++RR++ G+ A+R F L + +N+ +D LCKEG
Sbjct: 103 LAAFAPLVRRYARLGRAPAALRAFQFLRRHPDRYMAGGDIPAAASLLNMAVDALCKEGHP 162
Query: 220 ELARSVFLELK---SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYS 276
A +F + PP+ +NI +HGW + R+D+ EM+ G P V++Y
Sbjct: 163 RAAVELFERWRREEPDSPPDERAYNILLHGWSRAGRLDKVGKLWAEMRLAGVRPTVVTYG 222
Query: 277 TIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIV 336
T+I+ C + + LLDEM+ +G N++T ++ LA++G F++A ++ EK +
Sbjct: 223 TLIEGLCVKRRPDQAIALLDEMREEGIEANLLTCNPIVYALAQAGRFQDAHKVLEKFPLY 282
Query: 337 GSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEK 396
G P+ FN L+ + + A V +V M E G++P T T+N F+ + E
Sbjct: 283 GVAPNISTFNSLVMGYCKHGDLAGASSVLKV-MTERGISPTTRTYNYFFMTFAKNSDVES 341
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTL 456
+ +M + P+ T+ L+K + + E + Q++ +M H D+ T T+
Sbjct: 342 GMNFYSKMIGNGYS-PDQLTYVLLVKMLSRANRL-ELVVQMIQEM-RTHGFEPDLATSTM 398
Query: 457 VIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
+IH LCR ++ E A F++M I P+Y T + ++ E+K+ + +K+ +M+ +
Sbjct: 399 LIHLLCRRHQFEEACAEFEDMFKRGIVPQYITYQKLMRELKRLGLVRLIQKLTNLMRSV 457
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 107/233 (45%), Gaps = 2/233 (0%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDA 187
G + Y +++ L R+ DQ ALL+EM + I L T ++ + AG+++DA
Sbjct: 213 GVRPTVVTYGTLIEGLCVKRRPDQAIALLDEMREEGIEANLLTCNPIVYALAQAGRFQDA 272
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHG 246
+ ++ +G+ N T N L+ CK G + A SV + + I P T+N F
Sbjct: 273 HKVLEKFPLYGVAPNISTFNSLVMGYCKHGDLAGASSVLKVMTERGISPTTRTYNYFFMT 332
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
+ K + V+ +M G+G P ++Y +++ R V +++ EM+ G P+
Sbjct: 333 FAKNSDVESGMNFYSKMIGNGYSPDQLTYVLLVKMLSRANRLELVVQMIQEMRTHGFEPD 392
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
+ T T ++ L + FEEA E M G P + L+ L R V+
Sbjct: 393 LATSTMLIHLLCRRHQFEEACAEFEDMFKRGIVPQYITYQKLMRELKRLGLVR 445
>gi|115436834|ref|NP_001043148.1| Os01g0506100 [Oryza sativa Japonica Group]
gi|56201661|dbj|BAD73125.1| leaf protein -like [Oryza sativa Japonica Group]
gi|113532679|dbj|BAF05062.1| Os01g0506100 [Oryza sativa Japonica Group]
gi|215717162|dbj|BAG95525.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 541
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 176/359 (49%), Gaps = 15/359 (4%)
Query: 168 LNTIAKVMRRFSGAGQWEDAVRTFDEL--------GTFGLEKNTETMNLLLDTLCKEGKV 219
L A ++RR++ G+ A+R F L + +N+ +D LCKEG
Sbjct: 103 LAAFAPLVRRYARLGRAPAALRAFQFLRRHPDRYMAGGDIPAAASLLNMAVDALCKEGHP 162
Query: 220 ELARSVFLELK---SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYS 276
A +F + PP+ +NI +HGW + R+D+ EM+ G P V++Y
Sbjct: 163 RAAVELFERWRREEPDSPPDERAYNILLHGWSRAGRLDKVGKLWAEMRLAGVRPTVVTYG 222
Query: 277 TIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIV 336
T+I+ C + + LLDEM+ +G N++T ++ LA++G F++A ++ EK +
Sbjct: 223 TLIEGLCVKRRPDQAIALLDEMREEGIEANLLTCNPIVYALAQAGRFQDAHKVLEKFPLY 282
Query: 337 GSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEK 396
G P+ FN L+ + + A V +V M E G++P T T+N F+ + E
Sbjct: 283 GVAPNISTFNSLVMGYCKHGDLAGASSVLKV-MTERGISPTTRTYNYFFMTFAKNSDVES 341
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTL 456
+ +M + P+ T+ L+K + + E + Q++ +M H D+ T T+
Sbjct: 342 GMNFYSKMIGNGYS-PDQLTYVLLVKMLSRANRL-ELVVQMIQEM-RTHGFEPDLATSTM 398
Query: 457 VIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
+IH LCR ++ E A F++M I P+Y T + ++ E+K+ + +K+ +M+ +
Sbjct: 399 LIHLLCRRHQFEEACAEFEDMFKRGIVPQYITYQKLMRELKRLGLVHLIQKLTNLMRSV 457
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 105/228 (46%), Gaps = 2/228 (0%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDA 187
G + Y +++ L R+ DQ ALL+EM + I L T ++ + AG+++DA
Sbjct: 213 GVRPTVVTYGTLIEGLCVKRRPDQAIALLDEMREEGIEANLLTCNPIVYALAQAGRFQDA 272
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHG 246
+ ++ +G+ N T N L+ CK G + A SV + + I P T+N F
Sbjct: 273 HKVLEKFPLYGVAPNISTFNSLVMGYCKHGDLAGASSVLKVMTERGISPTTRTYNYFFMT 332
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
+ K + V+ +M G+G P ++Y +++ R V +++ EM+ G P+
Sbjct: 333 FAKNSDVESGMNFYSKMIGNGYSPDQLTYVLLVKMLSRANRLELVVQMIQEMRTHGFEPD 392
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGR 354
+ T T ++ L + FEEA E M G P + L+ L R
Sbjct: 393 LATSTMLIHLLCRRHQFEEACAEFEDMFKRGIVPQYITYQKLMRELKR 440
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/384 (28%), Positives = 199/384 (51%), Gaps = 13/384 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGT 196
Y ++ LG+ ++++ + +EM + L T ++ AG+ E A++ D +
Sbjct: 381 YNCILTCLGRKGKVEEALRIHDEMRQDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKE 440
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVD 254
GL N T+N+++D LCK K++ A S+FL L K C P++ TF I G + RVD
Sbjct: 441 AGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVC-SPDSRTFCSLIDGLGRRGRVD 499
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSY---CRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
+A ++M P V+ Y+++IQ++ R+ + K+Y+ EM +GC P+++
Sbjct: 500 DAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYK---EMVHRGCSPDLMLLN 556
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
+ M + K+G+ E+ + E++K G PD R ++ LI+ L +A +E ++ EM E
Sbjct: 557 SYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLF-YEMKE 615
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
G+ D +NT+I F G +KA+ +LEEM K + +P V T+ ++ K + D
Sbjct: 616 QGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEM-KTKGLQPTVVTYGSVVDGLAKIDRLD 674
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRL 491
E + +L + + L++ Y+ +I G + + + AYL+ +E++ +TP T
Sbjct: 675 E--AYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNC 732
Query: 492 ILDEVKQKHMYDAAEKIEAVMKKL 515
+LD + + D A+ MK L
Sbjct: 733 LLDALVKAEEIDEAQVCFQNMKNL 756
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/425 (26%), Positives = 191/425 (44%), Gaps = 45/425 (10%)
Query: 97 QPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRAL 156
QP ++ ++ R KD A FRW H E+Y + ++ + R +D + +
Sbjct: 99 QPE--VIVGVMKRLKD-VNVAFQYFRWVERKTQQAHCPEVYNAFLMVMARTRNLDYLEQI 155
Query: 157 LEEMSKGHI-----VTLNTIA---------------KVMRRF----------------SG 180
LEEMS V++ +A ++MR+F S
Sbjct: 156 LEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSA 215
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHT 239
A + + + F ++ G E N L+ +EG+++ A S+ E+KS +
Sbjct: 216 ANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVL 275
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+N+ I + K+ +VD A EMK G P ++Y+T+I C+ + EL +E+
Sbjct: 276 YNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELD 335
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
P V Y T++ +G F+EA + E+ K G P +NC++ LGR +V+
Sbjct: 336 LNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVE 395
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
EA+ ++ EM ++ AP+ +T+N +I M G E A V + M K PN+ T +
Sbjct: 396 EALRIHD-EMRQDA-APNLTTYNILIDMLCKAGELEAALKVQDTM-KEAGLFPNIMTVNI 452
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
++ K K DE S L ++ S D T+ +I GL R + + AY L+++M+
Sbjct: 453 MIDRLCKAQKLDEACSIFLG--LDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLD 510
Query: 480 HDITP 484
D P
Sbjct: 511 SDQIP 515
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 188/413 (45%), Gaps = 41/413 (9%)
Query: 140 MVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
++D LG+ ++D +L E+M I + +++ F G+ ED + + E+ G
Sbjct: 488 LIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRG 547
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQ 257
+ +N +D + K G+VE R++F E+K+ + P+ +++I IHG K E
Sbjct: 548 CSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETY 607
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
EMK G H V++Y+T+I +C+ K Y+LL+EM+ +G P VVTY +V+ L
Sbjct: 608 KLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGL 667
Query: 318 A-----------------------------------KSGDFEEAIRITEKMKIVGSKPDS 342
A K G +EA I E++ G P+S
Sbjct: 668 AKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNS 727
Query: 343 RFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLE 402
+NCL+ L +A + EA +Q M +P+ T++ MI KAF +
Sbjct: 728 YTWNCLLDALVKAEEIDEAQVCFQ-NMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQ 786
Query: 403 EMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC 462
EM K + KPN T+ ++ K G E ++ L D D Y +I GL
Sbjct: 787 EMQK-QGLKPNNITYTTMIAGLAKAGNVME--ARGLFDRFKASGGVPDSACYNAMIEGLS 843
Query: 463 RANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
ANK AY++F+E +TC ++LD + + + A + AV++++
Sbjct: 844 SANKAMDAYIVFEETRLKGCRVNSKTCVVLLDALHKADCLEQAAIVGAVLREM 896
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 141/278 (50%), Gaps = 6/278 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++D K ++D+ LLEEM +KG T+ T V+ + + ++A F+E
Sbjct: 625 YNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAK 684
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
+ G++ N + L+D K G+++ A + EL + + PN++T+N + K +D
Sbjct: 685 SIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEID 744
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EAQ Q MK C P ++YS +I C F+K + EMQ QG PN +TYTT++
Sbjct: 745 EAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMI 804
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
+ LAK+G+ EA + ++ K G PDS +N +I L A++ +A V++ E G
Sbjct: 805 AGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFE-ETRLKGC 863
Query: 375 APDTSTFNTMITMFSHHGHHEKAF---HVLEEMNKLEH 409
++ T ++ E+A VL EM K +H
Sbjct: 864 RVNSKTCVVLLDALHKADCLEQAAIVGAVLREMAKSQH 901
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 166/373 (44%), Gaps = 11/373 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIV----TLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++ +L K R++D+ L EE+ V NT+ + + AG++++A +
Sbjct: 311 YTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTM---IMGYGSAGKFDEAYSLLE 367
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINR 252
G + N +L L ++GKVE A + E++ PN T+NI I CK
Sbjct: 368 RQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAAPNLTTYNILIDMLCKAGE 427
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
++ A MK G P +++ + +I C+ + + + + C P+ T+ +
Sbjct: 428 LEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCS 487
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN 372
++ L + G ++A + EKM P+ + LI + R ++ +Y+ EM
Sbjct: 488 LIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYK-EMVHR 546
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
G +PD N+ + G EK + EE+ K + P+V+++ L+ K G + E
Sbjct: 547 GCSPDLMLLNSYMDCVFKAGEVEKGRALFEEI-KAQGLVPDVRSYSILIHGLVKAGFSRE 605
Query: 433 CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLI 492
+ + + L LD+ Y VI G C++ K + AY L +EM + P T +
Sbjct: 606 TYKLFYE--MKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSV 663
Query: 493 LDEVKQKHMYDAA 505
+D + + D A
Sbjct: 664 VDGLAKIDRLDEA 676
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 128/290 (44%), Gaps = 39/290 (13%)
Query: 81 DEVFQSLKQDHVCNAIQPSHYLVNKLIHRFK--DDWKSALGIFRWAGSCPGYEHSSEIYE 138
D+ +Q L ++ +QP+ ++ D A +F A S G + + IY
Sbjct: 639 DKAYQLL-EEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSI-GVDLNVVIYS 696
Query: 139 MMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
++D GKV ++D+ +LEE+ + G
Sbjct: 697 SLIDGFGKVGRIDEAYLILEELMQK----------------------------------G 722
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQ 257
L N+ T N LLD L K +++ A+ F +K+ PNA T++I I+G C I + ++A
Sbjct: 723 LTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAF 782
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
QEM+ G P I+Y+T+I + N + L D +A G P+ Y ++ L
Sbjct: 783 VFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGL 842
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
+ + +A + E+ ++ G + +S+ L+ L +A +++A V V
Sbjct: 843 SSANKAMDAYIVFEETRLKGCRVNSKTCVVLLDALHKADCLEQAAIVGAV 892
>gi|255586139|ref|XP_002533731.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526356|gb|EEF28650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 118/392 (30%), Positives = 185/392 (47%), Gaps = 14/392 (3%)
Query: 129 GYEHSSEIYEMMVDILGKV-RQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWED 186
G S Y +M+D+ GK+ R D++ LL+EM S+G T + V+ G ++
Sbjct: 252 GLSPSLVTYNVMLDVYGKMGRSWDKILELLDEMRSRGLDFDEFTCSTVLSACGREGLIDE 311
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK--SCIPPNAHTFNIFI 244
A F L + G + T T N LL K G A SV E++ +C PP+A T+N +
Sbjct: 312 AREFFSGLKSEGYKPGTVTYNALLHVFGKAGIFSEALSVLSEMEENNC-PPDAVTYNEVV 370
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
+ + +E I M G P ++Y+TII +Y R + K E+ D+M GC
Sbjct: 371 AAYVRAGFHEEGAVVIDAMASKGIMPNAVTYTTIINAYGRVGDIDKALEMFDQMMELGCV 430
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
PNV TY V+ L K EE ++I MK+ G P+ +N ++ G+ + YV
Sbjct: 431 PNVATYNAVLGMLGKKSLSEEMMKILGHMKLNGCSPNHITWNTMLAMCGKKGMHK---YV 487
Query: 365 YQV--EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLK 422
QV EM G PD TFNT+I+ + G + A + EEM K P + T++ LL
Sbjct: 488 NQVFREMKNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHEEMIK-AGFSPCINTYNALLN 546
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
+ + G S +L DM NK + T+Y+L++H + + ++ K + DI
Sbjct: 547 ALARRGDWKAAESVIL-DMRNKGFRPSE-TSYSLMVHSYAKGGNVKGIEMIEKSIYDGDI 604
Query: 483 TPRYQTCR-LILDEVKQKHMYDAAEKIEAVMK 513
P + R L+L K + + +A+ K
Sbjct: 605 FPSWMLLRTLVLANFKCRSLTGMERAFQALQK 636
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 143/320 (44%), Gaps = 11/320 (3%)
Query: 120 IFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRF 178
+FR +C G+E + + ++ G+ + + EEM K G +NT ++
Sbjct: 490 VFREMKNC-GFEPDRDTFNTLISAYGRCGSNNDAAKMHEEMIKAGFSPCINTYNALLNAL 548
Query: 179 SGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVE----LARSVFLELKSCIP 234
+ G W+ A ++ G + + +L++ + K G V+ + +S++ I
Sbjct: 549 ARRGDWKAAESVILDMRNKGFRPSETSYSLMVHSYAKGGNVKGIEMIEKSIY---DGDIF 605
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYEL 294
P+ + K + + Q ++ HG P ++ ++++ + + + + +E+
Sbjct: 606 PSWMLLRTLVLANFKCRSLTGMERAFQALQKHGYKPDLVLCNSMLSIFAKNNMYDRAHEM 665
Query: 295 LDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGR 354
L + G P++VT+ ++M A+ GD +A + ++ G KPD +N +I R
Sbjct: 666 LRLIHDAGLQPDLVTHNSLMDMYARGGDCWKAEEVLRMLQTSGGKPDLVSYNTVIKGFCR 725
Query: 355 ASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNV 414
+QE + + EM GV P T+NT I+ ++ G + V+ M + +C+PN
Sbjct: 726 KGLMQEGIRILS-EMTSIGVGPCIFTYNTFISGYAAQGMFTEINDVISYM-IVHNCRPNE 783
Query: 415 QTFHPLLKSCFKTGKTDECL 434
T+ + K + DE +
Sbjct: 784 LTYKIVADGYCKARRYDEAI 803
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 116/243 (47%), Gaps = 5/243 (2%)
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSG-DFEEAIRIT 330
V +Y+TI+ +Y R + + E+ + M G P++VTY ++ K G +++ + +
Sbjct: 222 VRAYTTILHAYSRTGKYHRAIEIFERMNESGLSPSLVTYNVMLDVYGKMGRSWDKILELL 281
Query: 331 EKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSH 390
++M+ G D + ++ GR + EA + + G P T T+N ++ +F
Sbjct: 282 DEMRSRGLDFDEFTCSTVLSACGREGLIDEAREFFS-GLKSEGYKPGTVTYNALLHVFGK 340
Query: 391 HGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLD 450
G +A VL EM + +C P+ T++ ++ + + G +E + ++D M +K + +
Sbjct: 341 AGIFSEALSVLSEMEE-NNCPPDAVTYNEVVAAYVRAGFHEEG-AVVIDAMASKGIMP-N 397
Query: 451 ITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEA 510
TYT +I+ R + A +F +M+ P T +L + +K + + KI
Sbjct: 398 AVTYTTIINAYGRVGDIDKALEMFDQMMELGCVPNVATYNAVLGMLGKKSLSEEMMKILG 457
Query: 511 VMK 513
MK
Sbjct: 458 HMK 460
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 68/140 (48%), Gaps = 1/140 (0%)
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEA 256
GL+ + T N L+D + G A V L+ S P+ ++N I G+C+ + E
Sbjct: 673 GLQPDLVTHNSLMDMYARGGDCWKAEEVLRMLQTSGGKPDLVSYNTVIKGFCRKGLMQEG 732
Query: 257 QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSY 316
+ EM G PC+ +Y+T I Y Q F+++ +++ M C PN +TY V
Sbjct: 733 IRILSEMTSIGVGPCIFTYNTFISGYAAQGMFTEINDVISYMIVHNCRPNELTYKIVADG 792
Query: 317 LAKSGDFEEAIRITEKMKIV 336
K+ ++EAI K+K V
Sbjct: 793 YCKARRYDEAIDFVSKIKDV 812
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 111/275 (40%), Gaps = 17/275 (6%)
Query: 96 IQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRA 155
I + L+N L R DWK+A + G+ S Y +MV K + +
Sbjct: 538 INTYNALLNALARR--GDWKAAESVI-LDMRNKGFRPSETSYSLMVHSYAKGGNVKGIEM 594
Query: 156 LLEEMSKGHIVTLNTIAKVM-------RRFSGAGQWEDAVRTFDELGTFGLEKNTETMNL 208
+ + + G I + + + R +G R F L G + + N
Sbjct: 595 IEKSIYDGDIFPSWMLLRTLVLANFKCRSLTGM------ERAFQALQKHGYKPDLVLCNS 648
Query: 209 LLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG 267
+L K + A + L + + P+ T N + + + +A+ ++ ++ G
Sbjct: 649 MLSIFAKNNMYDRAHEMLRLIHDAGLQPDLVTHNSLMDMYARGGDCWKAEEVLRMLQTSG 708
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
P ++SY+T+I+ +CR+ + +L EM + G P + TY T +S A G F E
Sbjct: 709 GKPDLVSYNTVIKGFCRKGLMQEGIRILSEMTSIGVGPCIFTYNTFISGYAAQGMFTEIN 768
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
+ M + +P+ + + +A R EA+
Sbjct: 769 DVISYMIVHNCRPNELTYKIVADGYCKARRYDEAI 803
>gi|224111364|ref|XP_002315827.1| predicted protein [Populus trichocarpa]
gi|222864867|gb|EEF01998.1| predicted protein [Populus trichocarpa]
Length = 472
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/397 (27%), Positives = 187/397 (47%), Gaps = 17/397 (4%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILG----KVRQMDQMRALL 157
LV ++ R + K++ F WAG Y H Y M+DIL K RQ + +L
Sbjct: 31 LVLNVLGRLHFEEKTSFRFFMWAGHQKNYSHEPCAYNEMIDILTSTKYKARQFRIVCDML 90
Query: 158 EEMSKGH--IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTE--TMNLLLDTL 213
+ M + + +V + + ++R ++ ++ V+ F + ++ E NLLLD L
Sbjct: 91 DYMKRNNKNVVPVEVLLTILRNYTE--KYLTRVQKFAKKKRIRVKTQPEINAFNLLLDAL 148
Query: 214 CKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI 273
CK E A +F +K+ + P+A+T+N+ GWC++ ++EM G P
Sbjct: 149 CKCCLAEDAEGLFKRVKNKVKPDANTYNVMFFGWCRVRNPTRGMKVLEEMIQLGHTPDSF 208
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQG---CPPNVVTYTTVMSYLAKSGDFEEAIRIT 330
+Y T I ++CR ++ EL + M+ +G P TY ++ L ++ +E ++
Sbjct: 209 TYITAIDAFCRAGMVNEAAELFEFMRTKGSTMSSPTAKTYAIMIGALVRNNRMDECFKLL 268
Query: 331 EKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSH 390
E M G PD F LI + A ++ EA Y + EM G PD T+N + +
Sbjct: 269 EDMINSGCLPDVSTFKELIEGMCSAGKIDEA-YRFLQEMGNKGYPPDIVTYNCFLKVLCE 327
Query: 391 HGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLD 450
+ + E+A + E M + C P+VQT + L+ F+ G D + ++K + D
Sbjct: 328 NKNSEEALRLYERMIE-AGCFPSVQTHNMLISMFFEMGDPDGAFETWYE--MDKRGCAQD 384
Query: 451 ITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
+ TY ++I GL NK E A L ++++ + YQ
Sbjct: 385 VDTYIVMIDGLFGCNKVEDACFLIEDIVNKGMKLPYQ 421
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 98/229 (42%), Gaps = 5/229 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIV---TLNTIAKVMRRFSGAGQW 184
G+ S Y +D + +++ L E M +KG + T T A ++ +
Sbjct: 202 GHTPDSFTYITAIDAFCRAGMVNEAAELFEFMRTKGSTMSSPTAKTYAIMIGALVRNNRM 261
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIF 243
++ + +++ G + T L++ +C GK++ A E+ + PP+ T+N F
Sbjct: 262 DECFKLLEDMINSGCLPDVSTFKELIEGMCSAGKIDEAYRFLQEMGNKGYPPDIVTYNCF 321
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
+ C+ +EA + M GC P V +++ +I + + +E EM +GC
Sbjct: 322 LKVLCENKNSEEALRLYERMIEAGCFPSVQTHNMLISMFFEMGDPDGAFETWYEMDKRGC 381
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
+V TY ++ L E+A + E + G K + F+ + L
Sbjct: 382 AQDVDTYIVMIDGLFGCNKVEDACFLIEDIVNKGMKLPYQKFDSFLMQL 430
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 108/245 (44%), Gaps = 27/245 (11%)
Query: 264 KGHGCHPC----VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS---- 315
K + PC +I T + RQ F V ++LD M+ NVV +++
Sbjct: 57 KNYSHEPCAYNEMIDILTSTKYKARQ--FRIVCDMLDYMKRNN--KNVVPVEVLLTILRN 112
Query: 316 ----YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
YL + F + RI V ++P+ FN L+ L + ++A +++ +
Sbjct: 113 YTEKYLTRVQKFAKKKRIR-----VKTQPEINAFNLLLDALCKCCLAEDAEGLFK--RVK 165
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
N V PD +T+N M + + + VLEEM +L H P+ T+ + + + G +
Sbjct: 166 NKVKPDANTYNVMFFGWCRVRNPTRGMKVLEEMIQLGH-TPDSFTYITAIDAFCRAGMVN 224
Query: 432 ECLSQLLDDMVNKHHL--SLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTC 489
E ++L + M K S TY ++I L R N+ + + L ++MI P T
Sbjct: 225 EA-AELFEFMRTKGSTMSSPTAKTYAIMIGALVRNNRMDECFKLLEDMINSGCLPDVSTF 283
Query: 490 RLILD 494
+ +++
Sbjct: 284 KELIE 288
>gi|357447159|ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482903|gb|AES64106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 790
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/412 (27%), Positives = 197/412 (47%), Gaps = 8/412 (1%)
Query: 107 IHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI- 165
+ R +DD + AL F WA Y H + +Y M+DIL K R R +L M++ I
Sbjct: 170 VLRSQDDERIALDFFYWADRQWRYRHDAIVYYTMLDILSKTRLCQGARRILRLMTRRGIE 229
Query: 166 VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSV 225
+ + VM +S AG +A+R + G+E + N + L K K+E A
Sbjct: 230 RSPEAFSYVMVSYSRAGMLRNALRILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRF 289
Query: 226 FLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCR 284
+K + I P+ ++N I G+C ++R+D+A I EM GC P +SY T++ C+
Sbjct: 290 LERMKVAGIEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCK 349
Query: 285 QYNFSKVYELLDEM-QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSR 343
+V L++ M Q P+ VTY T++ L+K G ++A+ + + G D
Sbjct: 350 DRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKV 409
Query: 344 FFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEE 403
++ ++ + + + +A + ++M G PD T+ +I F G ++A +L++
Sbjct: 410 GYSAVVDSFCKNKNIDKAKSLV-IDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQ 468
Query: 404 MNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCR 463
M K CKPN T+ LL GK+ E + ++ +H + + TY+ V+HGL R
Sbjct: 469 MYK-HGCKPNTVTYTVLLNGLCHNGKSLEAREMI--NVSEEHWWTPNAITYSAVMHGLRR 525
Query: 464 ANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEAVMKK 514
K A L +EMI P L++ + + +++ A + +E + K
Sbjct: 526 EGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHK 577
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 122/466 (26%), Positives = 217/466 (46%), Gaps = 44/466 (9%)
Query: 65 PDIDVIISKVHV---GSSEDEVFQSLKQDHVCNAIQPSHYLVNKLI------HRFKDDWK 115
PD+ + + ++V G+ ++ + L++ V I+P N LI HR DD
Sbjct: 265 PDLSICNTAIYVLVKGNKLEKALRFLERMKVA-GIEPDIVSYNCLIKGYCDVHRI-DDAL 322
Query: 116 SALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGH-----IVTLNT 170
+ + G CP + S Y ++ L K R++++++ L+E M + VT NT
Sbjct: 323 ELIAEMPFKG-CPPDKVS---YYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNT 378
Query: 171 IAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL- 229
+ + S G +DA+ E G + + ++D+ CK ++ A+S+ +++
Sbjct: 379 LIYAL---SKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMY 435
Query: 230 -KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
K C P+ T+ I G+C++ ++DEA+ +Q+M HGC P ++Y+ ++ C
Sbjct: 436 SKGC-NPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKS 494
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
+ E+++ + PN +TY+ VM L + G EA +T +M G P+ N L
Sbjct: 495 LEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLL 554
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
I +L R V A Y E G A + F ++I F G + A +LE+M L
Sbjct: 555 IQSLCRNQNVVGA-KKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDM-YLS 612
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT--TYTLVIHGLCRANK 466
+ P+ T+ L + K + DE S+L+ M+ K +D T TY VIH C+ +
Sbjct: 613 NKHPDAITYTTLFDALGKKSRLDEA-SELIVKMLGK---GIDPTPVTYRAVIHRFCQWGR 668
Query: 467 CEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMY----DAAEKI 508
+ L ++MI Q + + ++V +K Y + AEK+
Sbjct: 669 VDDMMKLLEKMIAR------QPFKTVYNQVIEKLCYFGNREEAEKL 708
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 191/368 (51%), Gaps = 8/368 (2%)
Query: 149 QMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTF-DELGTFGLEKNTETM 206
++D R L+EEM +G T + ++ + ++AV E+ G + T
Sbjct: 199 RVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTY 258
Query: 207 NLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
+ ++D LCK G++ A +F E+ SC P A T+N I G+C+ +DEA + +M
Sbjct: 259 STVIDGLCKAGRLRDAVDIFEEM-SC-APTAITYNSLIGGYCRAGDMDEAIRLLGKMVDD 316
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
C P VI+Y+T++ ++C+ YEL +M A P+VVT+T+++ L G E+A
Sbjct: 317 NCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDA 376
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
+ + E++ G P +NC++ ++++V++A + + G P+T T+N ++
Sbjct: 377 LELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELV-ADFRSRGFVPNTVTYNILVA 435
Query: 387 MFSHHGHHEKAFHVLEEMN-KLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKH 445
G ++A L+++N + C +V + +L + + G+TD+ + Q ++M+ +
Sbjct: 436 GCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAV-QFYEEMIQRG 494
Query: 446 HLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
++ T+ V+ LC+A++ + A+ L +EMI + TP TC ++ + M A
Sbjct: 495 YVPA-AATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKA 553
Query: 506 EKIEAVMK 513
+++ + ++
Sbjct: 554 DELASELR 561
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/432 (24%), Positives = 191/432 (44%), Gaps = 51/432 (11%)
Query: 99 SHYLVNKLIH-----RFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQM 153
+H LIH R D+ L + G PG + ++ +++ L + ++
Sbjct: 79 NHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPG----TLLHNVVIGGLCRAGRLRHA 134
Query: 154 RALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTL 213
+ +M+ H T K++ S AG+ DAV+ E+ + + T+ +++ +L
Sbjct: 135 LGVYRQMNDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSL 194
Query: 214 CKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEA-QWTIQEMKGHGCHPC 271
C +V+ AR + E L + NA T++ + G CK R+DEA + E+ G P
Sbjct: 195 CLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPD 254
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
+++YST+I C+ ++ +EM C P +TY +++ ++GD +EAIR+
Sbjct: 255 IVTYSTVIDGLCKAGRLRDAVDIFEEMS---CAPTAITYNSLIGGYCRAGDMDEAIRLLG 311
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHH 391
KM PD + L+ + R+ +A ++Q +M N ++PD TF +++
Sbjct: 312 KMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQ-QMVANKLSPDVVTFTSLVDGLCGE 370
Query: 392 GHHEKAFHVLEEMNKLE--------------HCK--------------------PNVQTF 417
G E A +LEE+ + +CK PN T+
Sbjct: 371 GRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTY 430
Query: 418 HPLLKSCFKTGKTDECLSQLLDDMVNKHH-LSLDITTYTLVIHGLCRANKCEWAYLLFKE 476
+ L+ C + G+TD+ L Q LD + ++ + Y +++ LCR + + A ++E
Sbjct: 431 NILVAGCCRAGRTDQAL-QYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEE 489
Query: 477 MIGHDITPRYQT 488
MI P T
Sbjct: 490 MIQRGYVPAAAT 501
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 177/368 (48%), Gaps = 8/368 (2%)
Query: 144 LGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNT 203
L R AL ++M++ V T ++ A ++A+ ++ + G+ T
Sbjct: 56 LCDARDTTTAMALFDKMAELGAVNHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGT 115
Query: 204 ETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
N+++ LC+ G++ A V+ ++ PP+ T+ +HG K R+ +A +QEM
Sbjct: 116 LLHNVVIGGLCRAGRLRHALGVYRQMNDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEM 175
Query: 264 KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF 323
P + + ++QS C EL++EM +G N +TY+ ++ L K
Sbjct: 176 VSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERL 235
Query: 324 EEAIR-ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFN 382
+EA+ + ++ G PD ++ +I L +A R+++AV +++ E AP T+N
Sbjct: 236 DEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFE----EMSCAPTAITYN 291
Query: 383 TMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMV 442
++I + G ++A +L +M ++C P+V T+ L+ + K G+ D+ +L MV
Sbjct: 292 SLIGGYCRAGDMDEAIRLLGKMVD-DNCAPDVITYTTLMSAFCKMGRLDDAY-ELFQQMV 349
Query: 443 NKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMY 502
+ LS D+ T+T ++ GLC + E A L +E+ P T ++D + +
Sbjct: 350 -ANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQV 408
Query: 503 DAAEKIEA 510
AE++ A
Sbjct: 409 RKAEELVA 416
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 170/392 (43%), Gaps = 44/392 (11%)
Query: 160 MSKGHIVTLNTIAKVMRRFSGAGQWED-AVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
+ G+ +T A V+R + + DE+ GL + +N +L LC
Sbjct: 2 LDAGYPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDARD 61
Query: 219 VELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTI 278
A ++F ++ N T+ IH CK +DEA + +MK G +P + ++ +
Sbjct: 62 TTTAMALFDKMAELGAVNHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVV 121
Query: 279 IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
I CR + +M PP+ +TYT ++ L+K+G +A+++ ++M
Sbjct: 122 IGGLCRAGRLRHALGVYRQMN-DAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARH 180
Query: 339 KPDSR-----------------------------------FFNCLIYTLGRASRVQEAVY 363
PD+ ++ L+ L + R+ EAV
Sbjct: 181 VPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVA 240
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
+ E+ G PD T++T+I G A + EEM+ C P T++ L+
Sbjct: 241 LLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS----CAPTAITYNSLIGG 296
Query: 424 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
+ G DE + +LL MV+ + + D+ TYT ++ C+ + + AY LF++M+ + ++
Sbjct: 297 YCRAGDMDEAI-RLLGKMVDD-NCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLS 354
Query: 484 PRYQTCRLILDEV-KQKHMYDAAEKIEAVMKK 514
P T ++D + + M DA E +E + ++
Sbjct: 355 PDVVTFTSLVDGLCGEGRMEDALELLEEITRR 386
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 98/211 (46%), Gaps = 6/211 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
+ +VD L +M+ LLEE+++ G T+ T V+ + + Q A +
Sbjct: 360 FTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFR 419
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS----CIPPNAHTFNIFIHGWCKIN 251
+ G NT T N+L+ C+ G+ + A +L S C P + + I + C+
Sbjct: 420 SRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPC-PTSVAMYAIILDALCRDG 478
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
R D+A +EM G P +++T++ + C+ + + +ELL+EM G P T
Sbjct: 479 RTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCD 538
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDS 342
V+S ++G ++A + ++++ K S
Sbjct: 539 AVVSAYCRAGMIQKADELASELRLYTDKSSS 569
>gi|225437663|ref|XP_002279193.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Vitis vinifera]
Length = 526
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/432 (26%), Positives = 205/432 (47%), Gaps = 27/432 (6%)
Query: 18 PLTSRIRFHSSSENCSHIVSSSPIESYCSDGARLDHHQVLCVDSPRLPDIDVIISKVHVG 77
P S I +S+ +N S + S RL + + + D++ + V
Sbjct: 23 PSISTIGLNSNPQNPSSVFS------------RLYWSETIAETTVDNGDVETVFRIVSSA 70
Query: 78 SSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFK---DDWKSALGIFRWAGSCPGYEHSS 134
SS + QSLK + + S+ L++K++ R + + AL F + G+ H+
Sbjct: 71 SSTRNLKQSLKS----SGVFLSNDLIDKVLKRVRFSHGNPFQALAFFNYTNKRKGFYHTP 126
Query: 135 EIYEMMVDILGKVRQMDQMRALLEEMSKG--HIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
+ M+ ILG+ R+ DQ+ LL +M + +++ ++ V+ R + + V +F
Sbjct: 127 FSLDTMLYILGRSRRFDQIWELLVDMRRKDQSLISPRSVQVVLGRIAKVCSVKQTVESFR 186
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINR 252
+ E +T N LL TLC+E + AR+V+ LK P+ TFNI + GW
Sbjct: 187 KFKKLVPEFDTACFNALLRTLCQEKSMRDARNVYHSLKHDFRPDLRTFNILLSGW---KS 243
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
+EA+ EM+ G P V+SY+ +I YC+ + Y+++D+M+ + P+V++YT+
Sbjct: 244 AEEAEGFFDEMREMGVEPDVVSYNCLIDVYCKGREIERAYKVIDKMRDEQISPDVISYTS 303
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN 372
++ L G ++A + ++MK G PD +N I A+R+ +A + EM
Sbjct: 304 IIGGLGLVGQPDKARDVLKEMKEYGCYPDVAAYNAAIRNFCIANRLGDADGLMD-EMVGK 362
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
G++P+ +T+N F ++ + + M K C PN Q+ L F+ + E
Sbjct: 363 GLSPNATTYNLFFRCFYWSNDLGRSCGLYQRMKK-TGCLPNTQSCM-FLTRLFRRQEKVE 420
Query: 433 CLSQLLDDMVNK 444
+L +DMV K
Sbjct: 421 MALELWNDMVEK 432
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 109/264 (41%), Gaps = 40/264 (15%)
Query: 264 KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM----QAQGCPPNVVTYTTVMSYLAK 319
K G + S T++ R F +++ELL +M Q+ P +V V+ +AK
Sbjct: 118 KRKGFYHTPFSLDTMLYILGRSRRFDQIWELLVDMRRKDQSLISPRSV---QVVLGRIAK 174
Query: 320 SGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV------------ 367
++ + K K + + D+ FN L+ TL + +++A VY
Sbjct: 175 VCSVKQTVESFRKFKKLVPEFDTACFNALLRTLCQEKSMRDARNVYHSLKHDFRPDLRTF 234
Query: 368 ------------------EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH 409
EM E GV PD ++N +I ++ E+A+ V+++M E
Sbjct: 235 NILLSGWKSAEEAEGFFDEMREMGVEPDVVSYNCLIDVYCKGREIERAYKVIDKMRD-EQ 293
Query: 410 CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEW 469
P+V ++ ++ G+ D+ +L +M ++ D+ Y I C AN+
Sbjct: 294 ISPDVISYTSIIGGLGLVGQPDKA-RDVLKEM-KEYGCYPDVAAYNAAIRNFCIANRLGD 351
Query: 470 AYLLFKEMIGHDITPRYQTCRLIL 493
A L EM+G ++P T L
Sbjct: 352 ADGLMDEMVGKGLSPNATTYNLFF 375
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 104/268 (38%), Gaps = 15/268 (5%)
Query: 83 VFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSAL---GIFRWAGSCPGYEHSSEIYEM 139
V+ SLK D +P N L+ WKSA G F G E Y
Sbjct: 219 VYHSLKHD-----FRPDLRTFNILLS----GWKSAEEAEGFFDEMREM-GVEPDVVSYNC 268
Query: 140 MVDILGKVRQMDQMRALLEEMSKGHIVT-LNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
++D+ K R++++ ++++M I + + ++ GQ + A E+ +G
Sbjct: 269 LIDVYCKGREIERAYKVIDKMRDEQISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYG 328
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQ 257
+ N + C ++ A + E+ + PNA T+N+F + N + +
Sbjct: 329 CYPDVAAYNAAIRNFCIANRLGDADGLMDEMVGKGLSPNATTYNLFFRCFYWSNDLGRSC 388
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
Q MK GC P S + + + RQ EL ++M +G ++ + L
Sbjct: 389 GLYQRMKKTGCLPNTQSCMFLTRLFRRQEKVEMALELWNDMVEKGFGSYILVSDVLFDML 448
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFF 345
G E + +M G KP + F
Sbjct: 449 CDMGKLVEVEKCCLQMIEKGHKPSNVSF 476
>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 122/448 (27%), Positives = 215/448 (47%), Gaps = 30/448 (6%)
Query: 69 VIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLI------HRFKDDWKSALGIFR 122
V+ +G +E E+F ++ + P Y N +I RF+D +K L R
Sbjct: 293 VLCKAGRLGEAE-ELFAQMEAERSV----PCAYAYNTMIMGYGSAGRFEDAYK-LLERLR 346
Query: 123 WAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAG 182
G P S + ++ LGK R++D+ +L E M K +T ++ G
Sbjct: 347 ERGCIP----SVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGG 402
Query: 183 QWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTF 240
+ E+A R DE+ L N T+N+++D LCK K+E A +F + C P+ T+
Sbjct: 403 RVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGC-NPDCVTY 461
Query: 241 NIFIHGWCKINRVDEAQWTIQEM--KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
I G K +VDEA ++M GH +P V Y+++I+++ +++ E+
Sbjct: 462 CSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVV--YTSLIRNFFIHGRKEDGHKIFKEL 519
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRV 358
+GC P++ T M + K+G+ E+ I E ++ G PD R ++ LI+ L +A +
Sbjct: 520 IRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQA 579
Query: 359 QEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHC-KPNVQTF 417
+E ++ M + G A D +N ++ F G KA+ +LEEM E C +P V T+
Sbjct: 580 RETSNIFHA-MKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMK--EKCVQPTVATY 636
Query: 418 HPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
++ K + DE + +L + + L++ Y+ +I G + + + AYL+ +EM
Sbjct: 637 GAIVDGLAKIDRLDE--AYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEM 694
Query: 478 IGHDITPRYQTCRLILDE-VKQKHMYDA 504
+ +TP T +LD VK + + +A
Sbjct: 695 MKKGLTPNVYTWNSLLDALVKAEEINEA 722
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/428 (26%), Positives = 197/428 (46%), Gaps = 12/428 (2%)
Query: 62 PRLPDIDVIISKVHVGSSEDEVFQSLKQ-DHVCNAIQPSHYLVNKLIHRF--KDDWKSAL 118
P ++II + +G +E ++ L + +H ++ P+ VN ++ R + A
Sbjct: 386 PNSSTYNIIIDMLCLGGRVEEAYRILDEMEHA--SLFPNLLTVNIMVDRLCKARKLEEAY 443
Query: 119 GIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRR 177
IF A S G Y ++D LGK Q+D+ L E+M GH ++R
Sbjct: 444 KIFESA-SQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRN 502
Query: 178 FSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPN 236
F G+ ED + F EL G + + +N +D + K G+VE R +F +++S P+
Sbjct: 503 FFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPD 562
Query: 237 AHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLD 296
+++I IHG K + E MK G +Y+ ++ +C+ K YE+L+
Sbjct: 563 VRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILE 622
Query: 297 EMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRAS 356
EM+ + P V TY ++ LAK +EA + E+ K G + + ++ LI G+
Sbjct: 623 EMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVG 682
Query: 357 RVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQT 416
R+ EA Y+ EM + G+ P+ T+N+++ +A + M +++ C PN T
Sbjct: 683 RIDEA-YLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMK-CPPNTYT 740
Query: 417 FHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKE 476
+ L+ + K ++ D + K L ++ TYT +I GL + AY LF+
Sbjct: 741 YSILINGLCRVQKYNKAFVFWQD--MQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFER 798
Query: 477 MIGHDITP 484
+ P
Sbjct: 799 FKANGGIP 806
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 195/414 (47%), Gaps = 18/414 (4%)
Query: 97 QPSHYLVNKLIH-RFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRA 155
Q +L L+ R DD A+ + R P + Y +++ L + R+ ++
Sbjct: 145 QACAHLAAALVRARRLDDAVLAVAVMRRLKFRPAFSA----YTVLIGALAEARRPERALE 200
Query: 156 LLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLC 214
LL +M + G+ V ++ ++R + GQ DA+ DE+ LE + N+ +D
Sbjct: 201 LLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFG 260
Query: 215 KEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI 273
K G V++A F ELK+ + P+ ++ I CK R+ EA+ +M+ PC
Sbjct: 261 KAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAY 320
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
+Y+T+I Y F Y+LL+ ++ +GC P+VV++ ++++ L K +EA+ + E M
Sbjct: 321 AYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM 380
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
K ++P+S +N +I L RV+EA + EM + P+ T N M+
Sbjct: 381 K-KDAEPNSSTYNIIIDMLCLGGRVEEAYRILD-EMEHASLFPNLLTVNIMVDRLCKARK 438
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
E+A+ + E ++ C P+ T+ L+ K G+ DE +L + M++ H + +
Sbjct: 439 LEEAYKIFESASQ-RGCNPDCVTYCSLIDGLGKKGQVDEAY-RLFEKMLDAGH-NANPVV 495
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITP------RYQTCRLILDEVKQKHM 501
YT +I + E + +FKE+I P Y C EV++ M
Sbjct: 496 YTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRM 549
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 167/370 (45%), Gaps = 5/370 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVM-RRFSGAGQWEDAVRTFDELG 195
Y M+ +L K ++ + L +M V M + AG++EDA + + L
Sbjct: 287 YTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLR 346
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDE 255
G + + N +L L K+ KV+ A S+F +K PN+ T+NI I C RV+E
Sbjct: 347 ERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEE 406
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
A + EM+ P +++ + ++ C+ + Y++ + +GC P+ VTY +++
Sbjct: 407 AYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLID 466
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
L K G +EA R+ EKM G + + LI R ++ +++ E+ G
Sbjct: 467 GLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFK-ELIRRGCK 525
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS 435
PD + NT + G EK + E++ P+V+++ L+ K G+ E S
Sbjct: 526 PDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFL-PDVRSYSILIHGLTKAGQARET-S 583
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE 495
+ M + +LD Y V+ G C++ K AY + +EM + P T I+D
Sbjct: 584 NIFHAM-KQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDG 642
Query: 496 VKQKHMYDAA 505
+ + D A
Sbjct: 643 LAKIDRLDEA 652
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 123/240 (51%), Gaps = 2/240 (0%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDA 187
G+ + Y +VD K ++ + +LEEM + + T+ T ++ + + ++A
Sbjct: 593 GFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEA 652
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHG 246
F+E + G+E N + L+D K G+++ A + E+ K + PN +T+N +
Sbjct: 653 YMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDA 712
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
K ++EA Q MK C P +YS +I CR ++K + +MQ QG PN
Sbjct: 713 LVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPN 772
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
VVTYTT++S LAK G+ +A + E+ K G PD+ FN LI + A+R EA V++
Sbjct: 773 VVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQVFE 832
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 170/407 (41%), Gaps = 47/407 (11%)
Query: 67 IDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGS 126
ID + K V + + L H N + + + N IH K+D G
Sbjct: 465 IDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGC 524
Query: 127 CPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWE 185
P + +D + K ++++ R + E++ S G + + + + ++ + AGQ
Sbjct: 525 KPDLT----LLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQAR 580
Query: 186 DAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFI 244
+ F + G + N ++D CK GKV A + E+K C+ P T+ +
Sbjct: 581 ETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIV 640
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG-- 302
G KI+R+DEA +E K G V+ YS++I + + + Y +L+EM +G
Sbjct: 641 DGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLT 700
Query: 303 ---------------------------------CPPNVVTYTTVMSYLAKSGDFEEAIRI 329
CPPN TY+ +++ L + + +A
Sbjct: 701 PNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVF 760
Query: 330 TEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFS 389
+ M+ G P+ + +I L + + +A +++ NG PD ++FN +I S
Sbjct: 761 WQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFE-RFKANGGIPDAASFNALIEGMS 819
Query: 390 HHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQ 436
+ +A+ V EE +L C+ N+++ LL + K+ ECL Q
Sbjct: 820 NANRAMEAYQVFEE-TRLRGCRINIKSCISLLDALNKS----ECLEQ 861
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 146/323 (45%), Gaps = 10/323 (3%)
Query: 189 RTFDELGTFGLEKNTETMNLLLDTLCKEGKVE---LARSVFLELKSCIPPNAHTFNIFIH 245
+ +E+ G + L L + +++ LA +V LK P + + I
Sbjct: 130 KVLEEMAVLGYGLPNQACAHLAAALVRARRLDDAVLAVAVMRRLK--FRPAFSAYTVLIG 187
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
+ R + A +++M+ G V ++T++++ R+ + L+DE++ P
Sbjct: 188 ALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEP 247
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
++V Y + K+G+ + A + ++K G KPD + +I+ L +A R+ EA ++
Sbjct: 248 DIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELF 307
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
E V P +NTMI + G E A+ +LE + + C P+V +F+ +L
Sbjct: 308 AQMEAERSV-PCAYAYNTMIMGYGSAGRFEDAYKLLERLRE-RGCIPSVVSFNSILTCLG 365
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
K K DE LS V K + +TY ++I LC + E AY + EM + P
Sbjct: 366 KKRKVDEALSLF---EVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPN 422
Query: 486 YQTCRLILDEVKQKHMYDAAEKI 508
T +++D + + + A KI
Sbjct: 423 LLTVNIMVDRLCKARKLEEAYKI 445
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 120/233 (51%), Gaps = 2/233 (0%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +VD L K+ ++D+ L EE SKG + + + ++ F G+ ++A +E+
Sbjct: 636 YGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMM 695
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVD 254
GL N T N LLD L K ++ A F +K PPN +T++I I+G C++ + +
Sbjct: 696 KKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYN 755
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
+A Q+M+ G P V++Y+T+I + N + Y L + +A G P+ ++ ++
Sbjct: 756 KAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALI 815
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
++ + EA ++ E+ ++ G + + + L+ L ++ +++A V V
Sbjct: 816 EGMSNANRAMEAYQVFEETRLRGCRINIKSCISLLDALNKSECLEQAAIVGAV 868
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 173/339 (51%), Gaps = 5/339 (1%)
Query: 157 LEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKE 216
+E ++ G L T +++ G+ ++A + +G +T T L+ CK
Sbjct: 191 IEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKN 250
Query: 217 GKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISY 275
G ++LA +F + K PN+ T++ I+G C R++EA ++EM G P V +Y
Sbjct: 251 GNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAY 310
Query: 276 STIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKI 335
+ I S C + +LL +M+ +GC PNV TYT ++S L++ G FE AI + KM
Sbjct: 311 TIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLA 370
Query: 336 VGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHE 395
G P + ++ LI L R + A+ +++ + + + P+T T+N +I F G+ +
Sbjct: 371 DGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSL-PNTETYNVIIKGFCSIGYIQ 429
Query: 396 KAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYT 455
KA + ++M K PNV T++ ++ FK G + + L +M+ + L LD TY
Sbjct: 430 KATAIFDQMLK-AGPSPNVITYNIIIHIYFKQGYMNNAMRLL--EMMKGNGLKLDTWTYA 486
Query: 456 LVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
+I G R K E A+ LF EM+ H I+P T I++
Sbjct: 487 NLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIIN 525
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 164/335 (48%), Gaps = 9/335 (2%)
Query: 160 MSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV 219
++ G + T T + ++ + G++E A+ F+ + + NTET N+++ C G +
Sbjct: 369 LADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYI 428
Query: 220 ELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTI 278
+ A ++F + LK+ PN T+NI IH + K ++ A ++ MKG+G +Y+ +
Sbjct: 429 QKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANL 488
Query: 279 IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
I + R + L +EM G PNVVTY +++ ++A+ + KM G+
Sbjct: 489 ISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGN 548
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
P S +N +I + +R+ EA + +M + G+ P+ T+ + I +G AF
Sbjct: 549 VPSSGTYNMMISGFSKTNRISEAEN-FCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAF 607
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
+ EM K ++ PN+ T+ L+ + G+ ++ +LLDD ++ TYT ++
Sbjct: 608 KIFHEMKKRDYF-PNLCTYSSLIDGLCQEGQAEDA-ERLLDDGCEP-----NVDTYTTLV 660
Query: 459 HGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
GLC +C A L + M + P + R +L
Sbjct: 661 RGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALL 695
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 156/334 (46%), Gaps = 5/334 (1%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTF 240
G + A FD + G + N+ T + L++ LC EG++E A + E+ I P H +
Sbjct: 251 GNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAY 310
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
I I C R EA + +MK GC P V +Y+ +I R F + +M A
Sbjct: 311 TIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLA 370
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
G P VTY+ +++ L G FE A+ I E M S P++ +N +I +Q+
Sbjct: 371 DGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQK 430
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
A ++ +M + G +P+ T+N +I ++ G+ A +LE M K K + T+ L
Sbjct: 431 ATAIFD-QMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMM-KGNGLKLDTWTYANL 488
Query: 421 LKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH 480
+ + GK + S L ++MV +H +S ++ TY +I+G K + A LF +M+
Sbjct: 489 ISGFSRGGKLEHAFS-LFNEMV-EHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVES 546
Query: 481 DITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
P T +++ + + AE M K
Sbjct: 547 GNVPSSGTYNMMISGFSKTNRISEAENFCGKMVK 580
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 179/382 (46%), Gaps = 6/382 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G + +S Y +++ L ++++ +LEEM KG T++ + AG+ +A
Sbjct: 267 GCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEA 326
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHG 246
V+ ++ G N +T L+ L ++GK E+A V+ + L + P A T++ I+
Sbjct: 327 VKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQ 386
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
R + A + M H P +Y+ II+ +C K + D+M G PN
Sbjct: 387 LYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPN 446
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
V+TY ++ K G A+R+ E MK G K D+ + LI R +++ A ++
Sbjct: 447 VITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFN 506
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
EM E+G++P+ T+N +I + + A + +M + + P+ T++ ++ K
Sbjct: 507 -EMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNV-PSSGTYNMMISGFSK 564
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
T + E MV K L ++ TYT I GLC+ + A+ +F EM D P
Sbjct: 565 TNRISEA-ENFCGKMV-KQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNL 622
Query: 487 QTCRLILDEVKQKHMYDAAEKI 508
T ++D + Q+ + AE++
Sbjct: 623 CTYSSLIDGLCQEGQAEDAERL 644
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 107/451 (23%), Positives = 209/451 (46%), Gaps = 25/451 (5%)
Query: 40 PIESYCSDGARLDHHQVLCVDSPRL--PDIDVIISKVHVGSSEDEVFQ---SLKQDHVCN 94
PI S C G + ++L R P++ + + G S D F+ + + +
Sbjct: 313 PIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALIS-GLSRDGKFEVAIGVYHKMLAD 371
Query: 95 AIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQ 152
+ P+ + LI++ + +++AL IF W S ++ E Y +++ + + +
Sbjct: 372 GLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNT-ETYNVIIKGFCSIGYIQK 430
Query: 153 MRALLEEMSKG----HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNL 208
A+ ++M K +++T N I + + G +A+R + + GL+ +T T
Sbjct: 431 ATAIFDQMLKAGPSPNVITYNIIIHI---YFKQGYMNNAMRLLEMMKGNGLKLDTWTYAN 487
Query: 209 LLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG 267
L+ + GK+E A S+F E+ + I PN T+N I+G+ + +VD+A +M G
Sbjct: 488 LISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESG 547
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
P +Y+ +I + + S+ +M QG PNV+TYT+ + L K+G A
Sbjct: 548 NVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAF 607
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITM 387
+I +MK P+ ++ LI L + + ++A + ++G P+ T+ T++
Sbjct: 608 KIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAE-----RLLDDGCEPNVDTYTTLVRG 662
Query: 388 FSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHL 447
G +A ++E M K + +P+ + + LL K + + L ++ D MV
Sbjct: 663 LCGKGRCYEADQLVESMKK-KGLQPSEEIYRALLVGQCKNLEVESAL-KIFDSMVTTGFQ 720
Query: 448 SLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
++ Y +I LC+AN + A +F+ M+
Sbjct: 721 PC-LSDYKALICALCKANFRQKAQCMFQTML 750
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 132/282 (46%), Gaps = 8/282 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +++ V ++D AL +M G++ + T ++ FS + +A ++
Sbjct: 520 YNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMV 579
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVD 254
GL N T +D LCK G+ LA +F E+K PN T++ I G C+ + +
Sbjct: 580 KQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAE 639
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
+A+ + + GC P V +Y+T+++ C + + +L++ M+ +G P+ Y ++
Sbjct: 640 DAERLLDD----GCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALL 695
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
K+ + E A++I + M G +P + LI L +A+ Q+A ++Q + ++
Sbjct: 696 VGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWN 755
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQT 416
+ D + ++ G + + +L M +C N QT
Sbjct: 756 S-DEVVWTVLLDGLLKEGETDLSLELLHVMES-RNCTLNFQT 795
>gi|3258568|gb|AAC24378.1| Unknown protein [Arabidopsis thaliana]
Length = 691
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/413 (26%), Positives = 194/413 (46%), Gaps = 43/413 (10%)
Query: 117 ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALL---EEMSKGHIVTLNT-IA 172
L F W S G+ H + + +M++ LG+ R ++ R L E S G + +
Sbjct: 84 GLRFFDWV-SNKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFN 142
Query: 173 KVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC 232
++R + AG ++++V+ F + G+ + T N LL L K G+ +A +F E++
Sbjct: 143 SLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRT 202
Query: 233 --IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG------------------CHPCV 272
+ P+++TFN I+G+CK + VDEA ++M+ G HP V
Sbjct: 203 YGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELAGKVKIAHNVLSGMLKKATDVHPNV 262
Query: 273 ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA--IRIT 330
+SY+T+++ YC + + + +M ++G PN VTY T++ L+++ ++E I I
Sbjct: 263 VSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIG 322
Query: 331 EKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSH 390
PD+ FN LI A + A+ V+Q EM + PD+++++ +I
Sbjct: 323 GNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQ-EMLNMKLHPDSASYSVLIRTLCM 381
Query: 391 HGHHEKAFHVLEEMNKLE------HCKPNVQTFHPLLKSCFKTGKT---DECLSQLLDDM 441
++A + E+ + E CKP ++P+ + GKT ++ QL+
Sbjct: 382 RNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRG 441
Query: 442 VNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
V D +Y +I G CR K + AY L M+ + P +T L++D
Sbjct: 442 VQ------DPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLID 488
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/328 (20%), Positives = 141/328 (42%), Gaps = 24/328 (7%)
Query: 186 DAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK----SCIPPNAHTFN 241
D +R FD + G ++ L+L+ L + + +AR+ ++ C+ FN
Sbjct: 83 DGLRFFDWVSNKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFN 142
Query: 242 IFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ-A 300
I + E+ Q MK G P V+++++++ ++ ++L DEM+
Sbjct: 143 SLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRT 202
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
G P+ T+ T+++ K+ +EA RI + M++ G + N L L +A+ V
Sbjct: 203 YGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELAGKVKIAH--NVLSGMLKKATDVH- 259
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
P+ ++ T++ + ++A V +M KPN T++ L
Sbjct: 260 ---------------PNVVSYTTLVRGYCMKQEIDEAVLVFHDMLS-RGLKPNAVTYNTL 303
Query: 421 LKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH 480
+K + + DE L+ + D T+ ++I C A + A +F+EM+
Sbjct: 304 IKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNM 363
Query: 481 DITPRYQTCRLILDEVKQKHMYDAAEKI 508
+ P + +++ + ++ +D AE +
Sbjct: 364 KLHPDSASYSVLIRTLCMRNEFDRAETL 391
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 130/317 (41%), Gaps = 38/317 (11%)
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--------KSC 232
AG + A++ F E+ L ++ + ++L+ TLC + + A ++F EL K
Sbjct: 347 AGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDE 406
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
P A +N C + +A+ +++ G SY T+I +CR+ F Y
Sbjct: 407 CKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPP-SYKTLITGHCREGKFKPAY 465
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
ELL M + P++ TY ++ L K G+ A ++M P + F+ ++ L
Sbjct: 466 ELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAEL 525
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
+ E+ + + M E + + ++ + EKAF ++
Sbjct: 526 AKRKFANESFCLVTL-MLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVR---------- 574
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDD--MVNKHHLSL---------DITTYTLVIHGL 461
LL K +E L L ++ +++ H L L DI T VI GL
Sbjct: 575 -------LLYDNGYLVKMEELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGL 627
Query: 462 CRANKCEWAYLLFKEMI 478
C+ + A+ L+ E++
Sbjct: 628 CKHKRHSEAFSLYNELV 644
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 96/229 (41%), Gaps = 10/229 (4%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTF 240
G+ + A + F +L G++ + + L+ C+EGK + A + L L+ P+ T+
Sbjct: 425 GKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETY 483
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
+ I G KI A T+Q M P ++ +++ ++ ++ + L+ M
Sbjct: 484 ELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLE 543
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
+ N+ T V+ L S E+A I + D+ + + LG ++
Sbjct: 544 KRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLY------DNGYLVKMEELLGYLCENRK 597
Query: 361 AVYVYQVEM--PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKL 407
+ + + + E D T NT+I H H +AF + E+ +L
Sbjct: 598 LLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVEL 646
>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 176/356 (49%), Gaps = 8/356 (2%)
Query: 163 GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELA 222
G ++LN+ ++ + + + E+ ++ N T N+ ++ LCK GK+ A
Sbjct: 160 GFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKA 219
Query: 223 RSVFLELKS-CIPPNAHTFNIFIHGWCK---INRVDEAQWTIQEMKGHGCHPCVISYSTI 278
V ++K+ PN T+N I G CK ++ A ++EM + P I+++T+
Sbjct: 220 EDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTL 279
Query: 279 IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
I +C+ N +EMQ QG PN+VTY ++++ L+ +G +EAI + +KM +G
Sbjct: 280 IDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGL 339
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
KP+ FN LI + ++EA ++ ++ E + P+ TFNTMI F G E+ F
Sbjct: 340 KPNIVTFNALINGFCKKKMIKEARKLFD-DIAEQDLVPNAITFNTMIDAFCKAGMMEEGF 398
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
+ M E PNV T++ L+ + + +LL++M N + L D+ TY ++I
Sbjct: 399 ALHNSMLD-EGIFPNVSTYNCLIAGLCRN-QNVRAAKKLLNEMEN-YELKADVVTYNILI 455
Query: 459 HGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
G C+ + A L EM+ + P + T ++D + AA K+ M+K
Sbjct: 456 GGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEK 511
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 170/368 (46%), Gaps = 9/368 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
+ + ++ L K ++++ ++E++ +IVT NT+ + AG+ A
Sbjct: 203 FNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILK 262
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKIN 251
E+ + N T N L+D CK+ V A++ F E+ + + PN T+N I+G
Sbjct: 263 EMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNG 322
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
++DEA +M G G P +++++ +I +C++ + +L D++ Q PN +T+
Sbjct: 323 KLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFN 382
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
T++ K+G EE + M G P+ +NCLI L R V+ A + EM
Sbjct: 383 TMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLN-EMEN 441
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
+ D T+N +I + G KA +L EM + KPN T++ L+ G
Sbjct: 442 YELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNV-GVKPNHVTYNTLMDGYCMEGNLK 500
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRL 491
L + + K ++ TY ++I G C+ K E A L EM+ + P T +
Sbjct: 501 AALK--VRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDV 558
Query: 492 ILDEVKQK 499
+ E+ +K
Sbjct: 559 VRLEMLEK 566
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 108/268 (40%), Gaps = 44/268 (16%)
Query: 95 AIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCP-GYEHSSEIYEMMVDILGKVRQMDQM 153
++P+ N LI+ ++ K I W G + + + +++ K + + +
Sbjct: 303 GLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEA 362
Query: 154 RALLEEMSKGHIV----TLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLL 209
R L +++++ +V T NT+ + F AG E+ + + G+ N T N L
Sbjct: 363 RKLFDDIAEQDLVPNAITFNTM---IDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCL 419
Query: 210 LDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGC 268
+ LC+ V A+ + E+++ + + T+NI I GWCK +A+ + EM G
Sbjct: 420 IAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGV 479
Query: 269 HPC-----------------------------------VISYSTIIQSYCRQYNFSKVYE 293
P V++Y+ +I+ +C+
Sbjct: 480 KPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANR 539
Query: 294 LLDEMQAQGCPPNVVTYTTVMSYLAKSG 321
LL+EM +G PN TY V + + G
Sbjct: 540 LLNEMLEKGLNPNRTTYDVVRLEMLEKG 567
>gi|302141714|emb|CBI18917.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 178/386 (46%), Gaps = 40/386 (10%)
Query: 114 WKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAK 173
+ L F WA + + HS E Y M+D+ GK
Sbjct: 126 FPQTLAFFNWATNLEEFGHSPEPYMEMIDLAGK--------------------------- 158
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCI 233
AG +AV F+ + +G + + ++++ +L K+ + A+S F LK
Sbjct: 159 -------AGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKDRF 211
Query: 234 PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
P+ + +HGWC+ + EA+ EMK G P V +YS +I + CR ++ ++
Sbjct: 212 EPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHD 271
Query: 294 LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLG 353
+ EM GC PN +T+ +M K+G E+ +++ +MK +G PD+ +N LI +
Sbjct: 272 VFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHC 331
Query: 354 RASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPN 413
R ++EAV + + + G + S+FN + S G A + +M L+ C+PN
Sbjct: 332 RDDNLEEAVKI--LNSVKKGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLK-CRPN 388
Query: 414 VQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLL 473
T++ L++ F K+ + + +L +M +++ + + TY ++I C AY
Sbjct: 389 TVTYNILMR-MFADKKSTDMVLKLRKEM-DENEIEPNANTYRVLISTFCGIGHWNNAYSF 446
Query: 474 FKEMIGHD-ITPRYQTCRLILDEVKQ 498
FKEMI + P ++L ++++
Sbjct: 447 FKEMIEEKCLRPSLPVYEMVLQQLRK 472
>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 859
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 190/415 (45%), Gaps = 42/415 (10%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G E Y +VD L K R MD+ +L +M KG T ++ +S +G W+++
Sbjct: 294 GVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKES 353
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIP----------- 234
+ F ++ + GL T N + +LCK G+ + A +F + K +P
Sbjct: 354 AKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHG 413
Query: 235 -----------------------PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPC 271
N H FNI I K +DEA EM+G G P
Sbjct: 414 YATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPD 473
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
V++YST+I ++CR + E +M + G PN V Y +++ GD +A +
Sbjct: 474 VVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVS 533
Query: 332 KMKIVG-SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSH 390
+M G +P+ FF+ +I++L RV +A V+ + + G P TFN++I +
Sbjct: 534 EMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVI-HIGDRPTIVTFNSLIDGYCL 592
Query: 391 HGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLD 450
G EKAF VL+ M + +P+V T++ L+ K+GK D+ L L +M++K +
Sbjct: 593 VGKMEKAFGVLDAMVSV-GIEPDVVTYNTLVSGYCKSGKIDDGL-ILFREMLHK-KVKPT 649
Query: 451 ITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
TY++V+ GL A + A +F EMI T +++L + + + D A
Sbjct: 650 TVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEA 704
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 172/366 (46%), Gaps = 7/366 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
+ +++ K MD+ + EM +G + T + ++ F G+ DA+ F ++
Sbjct: 442 FNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMI 501
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIP-PNAHTFNIFIHGWCKINRV 253
+ GLE NT + L+ C G + A+ + E+ S IP PN F+ IH C RV
Sbjct: 502 SIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRV 561
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
+A + G P +++++++I YC K + +LD M + G P+VVTY T+
Sbjct: 562 MDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTL 621
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
+S KSG ++ + + +M KP + ++ ++ L A R A ++ EM ++G
Sbjct: 622 VSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFH-EMIDSG 680
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
A D T+ ++ + ++A + ++ ++ CK ++ + ++ + +K + +E
Sbjct: 681 TAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMD-CKFDITILNTVINALYKVRRREE- 738
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
+ L ++ L +++TY ++IH L + E A +F M P + I+
Sbjct: 739 -ANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDII 797
Query: 494 DEVKQK 499
+ QK
Sbjct: 798 RMLLQK 803
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 159/386 (41%), Gaps = 55/386 (14%)
Query: 171 IAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN----------------------- 207
+A + R +G +DA FDEL G + +N
Sbjct: 77 VAAIARVRAGTFSTDDAHHLFDELLRQGTPVHNPALNGFLAALARAPDSVSCSNGPALVL 136
Query: 208 ------------------------LLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNI 242
+L+D C+ + +L + F L++ + N
Sbjct: 137 ALFNRICREEAGPRVAPLSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANT 196
Query: 243 FIHGWCKINRVDEA-QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ 301
F+ C R DEA + M GC P ISY+T+I+S C + +++ M +
Sbjct: 197 FLKCLCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKE 256
Query: 302 G--CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
G C P+VV++ TV+ K G+ +A + +M G +PD +N ++ L +A +
Sbjct: 257 GGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMD 316
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
+A V + +M + GV PD T+ +I +S GH +++ + +M + P + TF+
Sbjct: 317 KAELVLR-QMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTS-KGLIPGIVTFNS 374
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
+ S K G++ + ++ M K H+ D+ +Y++++HG + LF M
Sbjct: 375 FMSSLCKHGRSKDA-EEIFQYMTTKGHMP-DLVSYSILLHGYATEGRFADMNNLFHSMAD 432
Query: 480 HDITPRYQTCRLILDEVKQKHMYDAA 505
I +++ ++ M D A
Sbjct: 433 KGIVANCHCFNILISAHAKRGMMDEA 458
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 163/361 (45%), Gaps = 17/361 (4%)
Query: 133 SSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKV-MRRFSGAGQWEDAVRTF 191
S Y +++D + R+ D A + + + T A ++ A + ++AV
Sbjct: 155 SVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVL 214
Query: 192 -DELGTFGLEKNTETMNLLLDTLCKEGK----VELARSVFLELKSCIPPNAHTFNIFIHG 246
+ G N + N ++ +LC + + +++ + + E C P+ +FN IHG
Sbjct: 215 LHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRC-SPDVVSFNTVIHG 273
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
+ K V +A I EM G P V++Y++I+ + C+ K +L +M +G P+
Sbjct: 274 FFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPD 333
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
+TYT ++ + SG ++E+ ++ KM G P FN + +L + R ++A ++Q
Sbjct: 334 GLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQ 393
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHH---EKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
M G PD +++ ++ ++ G FH + + + +C F+ L+ +
Sbjct: 394 Y-MTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANC----HCFNILISA 448
Query: 424 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
K G DE + L+ + + D+ TY+ +I CR + A F +MI +
Sbjct: 449 HAKRGMMDEAM--LVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLE 506
Query: 484 P 484
P
Sbjct: 507 P 507
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 126/270 (46%), Gaps = 9/270 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKG---HIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
+ ++D V +M++ +L+ M S G +VT NT+ + + +G+ +D + F
Sbjct: 583 FNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTL---VSGYCKSGKIDDGLILFR 639
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKIN 251
E+ ++ T T +++LD L G+ A+ +F E+ S + T+ I + G C+ +
Sbjct: 640 EMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRND 699
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
DEA ++ C + +T+I + + + +L + G PNV TY
Sbjct: 700 LTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYG 759
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
++ L K G EEA + M+ G P SR N +I L + + +A Y Y ++
Sbjct: 760 VMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGY-YMSKVDG 818
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVL 401
++ + ST + ++++FS G H + L
Sbjct: 819 TIISLEASTTSLLMSLFSSKGKHREQIKFL 848
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 121/299 (40%), Gaps = 9/299 (3%)
Query: 38 SSPIESYCSDGARLDHHQVLCV-----DSPRLPDIDVIISKVHVGSSEDEVFQSLKQDHV 92
SS I S C++G +D H V + D P + + +I + ++ F L V
Sbjct: 549 SSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDA-MV 607
Query: 93 CNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSC-PGYEHSSEIYEMMVDILGKVRQMD 151
I+P N L+ + K G+ + + ++ Y +++D L +
Sbjct: 608 SVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTS 667
Query: 152 QMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLL 210
+ + EM G V ++T +++ ++A+ F +LG + + +N ++
Sbjct: 668 AAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVI 727
Query: 211 DTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCH 269
+ L K + E A +F + S + PN T+ + IH K V+EA M+ GC
Sbjct: 728 NALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCA 787
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
P + II+ ++ + K + ++ T + +MS + G E I+
Sbjct: 788 PSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKGKHREQIK 846
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 95/251 (37%), Gaps = 13/251 (5%)
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF-----E 324
P V + I + ++ + L DE+ QG P + ++ LA++ D
Sbjct: 72 PQVAFVAAIARVRAGTFSTDDAHHLFDELLRQGTPVHNPALNGFLAALARAPDSVSCSNG 131
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYTLG-------RASRVQEAVYVYQVEMPENGVAPD 377
A+ + +I + R ++T G RA R + + + G+
Sbjct: 132 PALVLALFNRICREEAGPRVAPLSVHTYGILMDCCCRARR-PDLGPAFFARLLRAGLRTR 190
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
T NT + H ++A VL C PN +++ ++KS ++ E L +
Sbjct: 191 TIEANTFLKCLCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMV 250
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVK 497
S D+ ++ VIHG + + A L EM+ + P T I+D +
Sbjct: 251 QRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALC 310
Query: 498 QKHMYDAAEKI 508
+ D AE +
Sbjct: 311 KARAMDKAELV 321
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 175/360 (48%), Gaps = 9/360 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +++D L K + D+ +L EM +G T +M AG++E A +
Sbjct: 264 YNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMA 323
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVD 254
+ T N L+ LCK+ V+ A+ + E + S P+ T++I G CK R+D
Sbjct: 324 ERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRID 383
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA ++EM G GC P +++Y+T+I C+ K YELL+ + + G P+VVTYT ++
Sbjct: 384 EAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIV 443
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
L K G ++A+++ E M G P + L+ L R RV EA ++++ EM
Sbjct: 444 DGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFK-EMVSKDC 502
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
D + +++ + ++A V++ + P + ++ L+ K G+ DE +
Sbjct: 503 TADALAYVSLVNGYCKSSRTKEAQKVVDGIRG----TPYIDVYNALMDGYCKEGRLDE-I 557
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
+ +DM + + +I TY +V+ GLC+ K + A+ + M P + +I+D
Sbjct: 558 PNVFEDMACRGCVP-NIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIID 616
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 184/382 (48%), Gaps = 10/382 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++D L K + ++ LLE + S G + + T ++ G+ + A++ + +
Sbjct: 404 YNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGML 463
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRV 253
G + T L++ LC+ G+V+ A +F E+ K C +A + ++G+CK +R
Sbjct: 464 KRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTA-DALAYVSLVNGYCKSSRT 522
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
EAQ + ++G P + Y+ ++ YC++ ++ + ++M +GC PN+ TY V
Sbjct: 523 KEAQKVVDGIRGT---PYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIV 579
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
M L K G +EA E M G PD +N +I L +AS+ +EA V +M + G
Sbjct: 580 MDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLD-QMIQAG 638
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
+ PD T+NT++ F + A +L+ M K P+ T++ L+ +T + +
Sbjct: 639 IPPDAVTYNTLMAQFCKEERFDDAVGILKNMIK-AGVDPDNVTYNTLISGLSQTNRLGDA 697
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
+L+ +M+ + TTY +I LC+ + A LL M GH + T + +
Sbjct: 698 Y-ELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFI 756
Query: 494 DEVKQKHMYDAAEKIEAVMKKL 515
D + ++ D A + + M L
Sbjct: 757 DRLCKEGRLDEASSLLSEMDTL 778
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 194/423 (45%), Gaps = 41/423 (9%)
Query: 94 NAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQM 153
+QP+ +V++++ R KD ++A+ F WAG G++HS+ + L + D++
Sbjct: 89 GTLQPA--VVSRVLQRLKDP-QTAIVFFVWAGD-RGFKHSTFTRNCFLQTLLENGSSDRI 144
Query: 154 RALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDT 212
A+ E M G+ T V++ Q + A D+ G + +L
Sbjct: 145 PAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRA 204
Query: 213 LCKEGKVELARSVFLELKS------------------C--------------IPPNAHTF 240
CK G+++ A +F + S C + P+ T+
Sbjct: 205 FCKTGRLKDALEIFRNIPSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTY 264
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
NI I G CK ++ D+A + EM G P +++++I+ C+ F + + LL M
Sbjct: 265 NILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAE 324
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
+ C P+ TY T++S L K + + A + ++ G PD ++ L L + R+ E
Sbjct: 325 RNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDE 384
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
A + + EM G P+ T+NT+I EKA+ +LE + P+V T+ +
Sbjct: 385 AFELVK-EMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFV-PDVVTYTII 442
Query: 421 LKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH 480
+ K G+ D+ L ++++ M+ K + + TYT ++ GLCR + + A+ +FKEM+
Sbjct: 443 VDGLCKEGRLDKAL-KMVEGML-KRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSK 500
Query: 481 DIT 483
D T
Sbjct: 501 DCT 503
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 188/382 (49%), Gaps = 18/382 (4%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL- 194
Y +++ L + ++D+ + +EM SK ++ + + + ++A + D +
Sbjct: 474 YTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIR 533
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINR 252
GT + N L+D CKEG+++ +VF ++ + C+P N T+NI + G CK +
Sbjct: 534 GT----PYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVP-NIKTYNIVMDGLCKHGK 588
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
VDEA ++ M GC P V+SY+ II + + ++LD+M G PP+ VTY T
Sbjct: 589 VDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNT 648
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN 372
+M+ K F++A+ I + M G PD+ +N LI L + +R+ +A Y EM N
Sbjct: 649 LMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDA-YELMHEMLRN 707
Query: 373 G-VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
G V +T+NT+I G ++A +++ M + N T++ + K G+ D
Sbjct: 708 GCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTG-HGVEANTVTYNIFIDRLCKEGRLD 766
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG-HDITPRYQTCR 490
E S LL +M D +YT VI GLC+A + + A L +EM+ + T
Sbjct: 767 EA-SSLLSEMDTLR----DEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFN 821
Query: 491 LILDEVKQKHMYDAAEKIEAVM 512
L++D + D A + +M
Sbjct: 822 LLIDAFTKTKRLDEALTLLGLM 843
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 173/360 (48%), Gaps = 11/360 (3%)
Query: 126 SCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQW 184
+C G + + Y +++D L K ++D+ LE M S G + + + ++ A +
Sbjct: 565 ACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKP 624
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIF 243
++A + D++ G+ + T N L+ CKE + + A + + K+ + P+ T+N
Sbjct: 625 KEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTL 684
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGC--HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ 301
I G + NR+ +A + EM +GC C +Y+TII C++ + L+D M
Sbjct: 685 ISGLSQTNRLGDAYELMHEMLRNGCVVSACT-TYNTIIDRLCKEGCLKQALLLMDHMTGH 743
Query: 302 GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
G N VTY + L K G +EA + +M + D + +I L +A ++ A
Sbjct: 744 GVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTL---RDEVSYTTVIIGLCKAEQLDRA 800
Query: 362 VYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLL 421
+ + + G+ + TFN +I F+ ++A +L M + C P+V T++ ++
Sbjct: 801 SKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQ-RGCSPSVITYNMVI 859
Query: 422 KSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHD 481
K K D+ +L D+M + ++ ++ YT++I+GLC + + A + +EM D
Sbjct: 860 TCLCKLDKVDKAW-ELFDEMAVRGIVASSVS-YTVLIYGLCGQGRGKEALQVLEEMASSD 917
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/413 (23%), Positives = 173/413 (41%), Gaps = 75/413 (18%)
Query: 132 HSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTF 191
S + + ++D+LG ++ +R LE+ +G + +++V++R + A+ F
Sbjct: 59 RSESLQQDVLDLLGLLQSGSNIRERLEQW-RGTLQPA-VVSRVLQRLKDP---QTAIVFF 113
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKIN 251
G G + +T T N L TL + G + ++F
Sbjct: 114 VWAGDRGFKHSTFTRNCFLQTLLENGSSDRIPAMF------------------------- 148
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
+ M G P +Y +I+S C+ K + +LD+ + +G P V YT
Sbjct: 149 ---------ERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYT 199
Query: 312 TVMSYLAKSGDFEEAIRI-------------------------------TEKMKIVGSKP 340
+ K+G ++A+ I ++M P
Sbjct: 200 ILTRAFCKTGRLKDALEIFRNIPSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAP 259
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
D +N LI L +AS+ +A + EM + GV PDT TFN+++ G E+A +
Sbjct: 260 DVFTYNILIDGLCKASKTDKASEMLH-EMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSL 318
Query: 401 LEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHG 460
L M + +C+P+ T++ L+ K D L+D+ V+ + D+ TY+++ G
Sbjct: 319 LAVMAE-RNCRPSCCTYNTLISGLCKQQNVDRA-KDLVDEFVSSGFVP-DVVTYSILADG 375
Query: 461 LCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEAVM 512
LC+ + + A+ L KEM G TP T ++D + K A E +E+++
Sbjct: 376 LCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLV 428
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 147/322 (45%), Gaps = 19/322 (5%)
Query: 54 HQVLCVDSPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRF--K 111
H CV P + ++II + S E Q L Q + I P N L+ +F +
Sbjct: 600 HSAGCV--PDVVSYNIIIDGLFKASKPKEARQVLDQ-MIQAGIPPDAVTYNTLMAQFCKE 656
Query: 112 DDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIV--TLN 169
+ + A+GI + G + + Y ++ L + ++ L+ EM + V
Sbjct: 657 ERFDDAVGILKNMIK-AGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACT 715
Query: 170 TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL 229
T ++ R G + A+ D + G+E NT T N+ +D LCKEG+++ A S+ E+
Sbjct: 716 TYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM 775
Query: 230 KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM---KGHGCHPCVIS--YSTIIQSYCR 284
+ + ++ I G CK ++D A +EM KG C+ S ++ +I ++ +
Sbjct: 776 DTL--RDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGL----CITSHTFNLLIDAFTK 829
Query: 285 QYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRF 344
+ LL M +GC P+V+TY V++ L K ++A + ++M + G S
Sbjct: 830 TKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVS 889
Query: 345 FNCLIYTLGRASRVQEAVYVYQ 366
+ LIY L R +EA+ V +
Sbjct: 890 YTVLIYGLCGQGRGKEALQVLE 911
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 86/180 (47%), Gaps = 10/180 (5%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLN---TIAKVMRRFSGAGQWE 185
G E ++ Y + +D L K ++D+ +LL EM TL + V+ A Q +
Sbjct: 744 GVEANTVTYNIFIDRLCKEGRLDEASSLLSEMD-----TLRDEVSYTTVIIGLCKAEQLD 798
Query: 186 DAVRTFDEL-GTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIF 243
A + E+ GL + T NLL+D K +++ A ++ L ++ P+ T+N+
Sbjct: 799 RASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMV 858
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
I CK+++VD+A EM G +SY+ +I C Q + ++L+EM + C
Sbjct: 859 ITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDC 918
>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 175/352 (49%), Gaps = 41/352 (11%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +++D L K R+ D+ R L EEM +G T+ + ++ F G+WE+A R F+E+
Sbjct: 245 YSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMV 304
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRVD 254
G++ N T N+L+D LCKEGKV A+ + + ++ I PN T+N I G+C + ++
Sbjct: 305 NQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLN 364
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
A+ M GC P VI Y+ +I YC+ + +L + M G P+V TY ++
Sbjct: 365 SARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALL 424
Query: 315 SYLAKSGDFEEAIRITEKMKIVG-----------------------------------SK 339
+ L + G +A ++ MK+ G K
Sbjct: 425 TGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIK 484
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
D FNCLI L +A +++ A +++ ++P+ + PD T+N MI F G KA
Sbjct: 485 LDIECFNCLIDGLCKAGKLETAWELFE-KLPQEELQPDVVTYNIMIHEFCRGGQVVKANI 543
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDI 451
+ ++M K C P+ T+ L++ F++ K ++ + +LL MV + +SLD+
Sbjct: 544 LFQKMEK-NGCTPDKITYATLIRGFFESKKLEKVV-ELLHMMVQR-DVSLDV 592
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/418 (23%), Positives = 181/418 (43%), Gaps = 50/418 (11%)
Query: 138 EMMVDILGKVRQMDQMRALLEE-MSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGT 196
++++ L V ++ + A++ + +G+I + T +++ + A F +
Sbjct: 135 NILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQK 194
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-------CIPPNAHTFNIFIHGWCK 249
G N T L+ LC+ G + +A + E+ + P +++I I CK
Sbjct: 195 LGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCK 254
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
R DEA+ +EMK G P VISY+++I +C + + L +EM QG PNVVT
Sbjct: 255 DRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVT 314
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM 369
+ ++ L K G EA + E M G P+ +N LI + A ++ V M
Sbjct: 315 FNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELF-VSM 373
Query: 370 PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
P G PD + +I + E+A + M ++ +P+V+T+ LL F+ GK
Sbjct: 374 PSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGK-RPDVKTYGALLTGLFQGGK 432
Query: 430 TDE-------------------------------CLSQLLD--DMVNKHHLSLDITTYTL 456
+ CL + ++ + + +++ LDI +
Sbjct: 433 VGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNC 492
Query: 457 VIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE-------VKQKHMYDAAEK 507
+I GLC+A K E A+ LF+++ ++ P T +++ E VK ++ EK
Sbjct: 493 LIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEK 550
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 161/353 (45%), Gaps = 11/353 (3%)
Query: 168 LNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFL 227
L++ ++ + + ++++ G+ + T+N+LL+ LC +V +V
Sbjct: 96 LSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMA 155
Query: 228 E-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQY 286
L+ P+ T+ I G C +R+ +A M+ GC P I+Y T+++ CR
Sbjct: 156 GILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTG 215
Query: 287 NFSKVYELLDEMQAQGC------PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
N S +L EM P V++Y+ ++ L K +EA + E+MK+ G P
Sbjct: 216 NISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTP 275
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
+ LI+ + +EA ++ EM GV P+ TFN +I + G +A +
Sbjct: 276 TVISYTSLIHGFCCGGKWEEAKRLFN-EMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDL 334
Query: 401 LEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHG 460
LE M + PN+ T++ L++ G + +L M +K D+ YT++I+G
Sbjct: 335 LEVMIQ-RGIVPNLLTYNSLIEGFCLVGDLNSA-RELFVSMPSKG-CEPDVICYTVLING 391
Query: 461 LCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
C+ +K E A L+ M+ P +T +L + Q A+K+ VMK
Sbjct: 392 YCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMK 444
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 133/310 (42%), Gaps = 15/310 (4%)
Query: 35 IVSSSPIESYCSDGA-----RLDHHQVLCVDSPRLPDIDVIISKVHVGSSEDEVFQS--L 87
I +S I +C G RL + V P + +V+I V E +V ++ L
Sbjct: 278 ISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLID---VLCKEGKVIEAKDL 334
Query: 88 KQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILG 145
+ + I P+ N LI F D SA +F S G E Y ++++
Sbjct: 335 LEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPS-KGCEPDVICYTVLINGYC 393
Query: 146 KVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTE 204
K ++++ L M + G + T ++ G+ DA + F + +G+ +
Sbjct: 394 KTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLY 453
Query: 205 TMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
+ L+ LCK G + A +F +LKS I + FN I G CK +++ A +++
Sbjct: 454 IYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKL 513
Query: 264 KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF 323
P V++Y+ +I +CR K L +M+ GC P+ +TY T++ +S
Sbjct: 514 PQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKL 573
Query: 324 EEAIRITEKM 333
E+ + + M
Sbjct: 574 EKVVELLHMM 583
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 128/286 (44%), Gaps = 17/286 (5%)
Query: 214 CKEGKVELARSV---FLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHP 270
CK G + ++ L + S P +F + G KI + + +M+ G P
Sbjct: 70 CKTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEMQA---QGCPPNVVTYTTVMSYLAKSGDFEEAI 327
+ + ++ C N ++V E L M +G P++VTYTT++ L +A
Sbjct: 130 DCCTLNILLNCLC---NVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAA 186
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV-----APDTSTFN 382
+ +M+ +G P++ + L+ L R + A+ ++Q + ++ + P +++
Sbjct: 187 LLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYS 246
Query: 383 TMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMV 442
+I ++A + EEM K++ P V ++ L+ GK +E +L ++MV
Sbjct: 247 IIIDALCKDRREDEARDLFEEM-KVQGMTPTVISYTSLIHGFCCGGKWEEA-KRLFNEMV 304
Query: 443 NKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
N+ + ++ T+ ++I LC+ K A L + MI I P T
Sbjct: 305 NQ-GVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLT 349
>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
Length = 716
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 122/448 (27%), Positives = 215/448 (47%), Gaps = 30/448 (6%)
Query: 69 VIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLI------HRFKDDWKSALGIFR 122
V+ +G +E E+F ++ + P Y N +I RF+D +K L R
Sbjct: 159 VLCKAGRLGEAE-ELFAQMEAERSV----PCAYAYNTMIMGYGSAGRFEDAYK-LLERLR 212
Query: 123 WAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAG 182
G P S + ++ LGK R++D+ +L E M K +T ++ G
Sbjct: 213 ERGCIP----SVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGG 268
Query: 183 QWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTF 240
+ E+A R DE+ L N T+N+++D LCK K+E A +F + C P+ T+
Sbjct: 269 RVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGC-NPDCVTY 327
Query: 241 NIFIHGWCKINRVDEAQWTIQEM--KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
I G K +VDEA ++M GH +P V Y+++I+++ +++ E+
Sbjct: 328 CSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVV--YTSLIRNFFIHGRKEDGHKVFKEL 385
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRV 358
+GC P++ T M + K+G+ E+ I E ++ G PD R ++ LI+ L +A +
Sbjct: 386 IRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQA 445
Query: 359 QEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHC-KPNVQTF 417
+E ++ M + G A D +N ++ F G KA+ +LEEM E C +P V T+
Sbjct: 446 RETSNIFHA-MKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMK--EKCVQPTVATY 502
Query: 418 HPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
++ K + DE + +L + + L++ Y+ +I G + + + AYL+ +EM
Sbjct: 503 GAIVDGLAKIDRLDE--AYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEM 560
Query: 478 IGHDITPRYQTCRLILDE-VKQKHMYDA 504
+ +TP T +LD VK + + +A
Sbjct: 561 MKKGLTPNVYTWNSLLDALVKAEEINEA 588
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/428 (26%), Positives = 197/428 (46%), Gaps = 12/428 (2%)
Query: 62 PRLPDIDVIISKVHVGSSEDEVFQSLKQ-DHVCNAIQPSHYLVNKLIHRF--KDDWKSAL 118
P ++II + +G +E ++ L + +H ++ P+ VN ++ R + A
Sbjct: 252 PNSSTYNIIIDMLCLGGRVEEAYRILDEMEHA--SLFPNLLTVNIMVDRLCKARKLEEAY 309
Query: 119 GIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRR 177
IF A S G Y ++D LGK Q+D+ L E+M GH ++R
Sbjct: 310 KIFESA-SQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRN 368
Query: 178 FSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPN 236
F G+ ED + F EL G + + +N +D + K G+VE R +F +++S P+
Sbjct: 369 FFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPD 428
Query: 237 AHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLD 296
+++I IHG K + E MK G +Y+ ++ +C+ K YE+L+
Sbjct: 429 VRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILE 488
Query: 297 EMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRAS 356
EM+ + P V TY ++ LAK +EA + E+ K G + + ++ LI G+
Sbjct: 489 EMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVG 548
Query: 357 RVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQT 416
R+ EA Y+ EM + G+ P+ T+N+++ +A + M +++ C PN T
Sbjct: 549 RIDEA-YLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMK-CPPNTYT 606
Query: 417 FHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKE 476
+ L+ + K ++ D + K L ++ TYT +I GL + AY LF+
Sbjct: 607 YSILINGLCRVQKYNKAFVFWQD--MQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFER 664
Query: 477 MIGHDITP 484
+ P
Sbjct: 665 FKANGGIP 672
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 190/401 (47%), Gaps = 17/401 (4%)
Query: 109 RFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVT 167
R DD A+ + R P + Y +++ L + R+ ++ LL +M + G+ V
Sbjct: 24 RRLDDAVLAVAVMRRLKFRPAFSA----YTVLIGALAEARRPERALELLRQMQEVGYEVG 79
Query: 168 LNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFL 227
++ ++R + GQ DA+ DE+ LE + N+ +D K G V++A F
Sbjct: 80 VHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFH 139
Query: 228 ELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQY 286
ELK+ + P+ ++ I CK R+ EA+ +M+ PC +Y+T+I Y
Sbjct: 140 ELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAG 199
Query: 287 NFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFN 346
F Y+LL+ ++ +GC P+VV++ ++++ L K +EA+ + E MK ++P+S +N
Sbjct: 200 RFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK-KDAEPNSSTYN 258
Query: 347 CLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNK 406
+I L RV+EA + EM + P+ T N M+ E+A+ + E ++
Sbjct: 259 IIIDMLCLGGRVEEAYRILD-EMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQ 317
Query: 407 LEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANK 466
C P+ T+ L+ K G+ DE +L + M++ H + + YT +I +
Sbjct: 318 -RGCNPDCVTYCSLIDGLGKKGQVDEAY-RLFEKMLDAGH-NANPVVYTSLIRNFFIHGR 374
Query: 467 CEWAYLLFKEMIGHDITP------RYQTCRLILDEVKQKHM 501
E + +FKE+I P Y C EV++ M
Sbjct: 375 KEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRM 415
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 167/370 (45%), Gaps = 5/370 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVM-RRFSGAGQWEDAVRTFDELG 195
Y M+ +L K ++ + L +M V M + AG++EDA + + L
Sbjct: 153 YTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLR 212
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDE 255
G + + N +L L K+ KV+ A S+F +K PN+ T+NI I C RV+E
Sbjct: 213 ERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEE 272
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
A + EM+ P +++ + ++ C+ + Y++ + +GC P+ VTY +++
Sbjct: 273 AYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLID 332
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
L K G +EA R+ EKM G + + LI R ++ V++ E+ G
Sbjct: 333 GLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFK-ELIRRGCK 391
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS 435
PD + NT + G EK + E++ P+V+++ L+ K G+ E S
Sbjct: 392 PDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFL-PDVRSYSILIHGLTKAGQARET-S 449
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE 495
+ M + +LD Y V+ G C++ K AY + +EM + P T I+D
Sbjct: 450 NIFHAM-KQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDG 508
Query: 496 VKQKHMYDAA 505
+ + D A
Sbjct: 509 LAKIDRLDEA 518
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 128/256 (50%), Gaps = 7/256 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDA 187
G+ + Y +VD K ++ + +LEEM + + T+ T ++ + + ++A
Sbjct: 459 GFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEA 518
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHG 246
F+E + G+E N + L+D K G+++ A + E+ K + PN +T+N +
Sbjct: 519 YMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDA 578
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
K ++EA Q MK C P +YS +I CR ++K + +MQ QG PN
Sbjct: 579 LVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPN 638
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA--VYV 364
VVTYTT++S LAK G+ +A + E+ K G PD+ FN LI + A+R EA V
Sbjct: 639 VVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQTTV 698
Query: 365 YQVEMPE---NGVAPD 377
YQ+ N + PD
Sbjct: 699 YQLSSSSCSWNFLVPD 714
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 134/288 (46%), Gaps = 7/288 (2%)
Query: 221 LARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQ 280
LA +V LK P + + I + R + A +++M+ G V ++T+++
Sbjct: 31 LAVAVMRRLK--FRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVR 88
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
+ R+ + L+DE++ P++V Y + K+G+ + A + ++K G KP
Sbjct: 89 ALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKP 148
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
D + +I+ L +A R+ EA ++ +M P +NTMI + G E A+ +
Sbjct: 149 DDVSYTSMIWVLCKAGRLGEAEELF-AQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKL 207
Query: 401 LEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHG 460
LE + + C P+V +F+ +L K K DE LS V K + +TY ++I
Sbjct: 208 LERLRE-RGCIPSVVSFNSILTCLGKKRKVDEALSLF---EVMKKDAEPNSSTYNIIIDM 263
Query: 461 LCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
LC + E AY + EM + P T +++D + + + A KI
Sbjct: 264 LCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKI 311
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 151/369 (40%), Gaps = 40/369 (10%)
Query: 67 IDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGS 126
ID + K V + + L H N + + + N IH K+D G
Sbjct: 331 IDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGC 390
Query: 127 CPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWE 185
P + +D + K ++++ R + E++ S G + + + + ++ + AGQ
Sbjct: 391 KP----DLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQAR 446
Query: 186 DAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFI 244
+ F + G + N ++D CK GKV A + E+K C+ P T+ +
Sbjct: 447 ETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIV 506
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
G KI+R+DEA +E K G V+ YS++I + + + Y +L+EM +G
Sbjct: 507 DGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLT 566
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
PNV T+ +++ L K+ + EA+ + MK + P++ ++ LI L R + +A
Sbjct: 567 PNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVF 626
Query: 365 YQ----------------------------------VEMPENGVAPDTSTFNTMITMFSH 390
+Q NG PD ++FN +I S+
Sbjct: 627 WQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSN 686
Query: 391 HGHHEKAFH 399
+A+
Sbjct: 687 ANRAMEAYQ 695
>gi|42567170|ref|NP_194410.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332659854|gb|AEE85254.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 369
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 182/360 (50%), Gaps = 5/360 (1%)
Query: 156 LLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK 215
+L+ M G + T + ++ F + +DAV ++ G++++ +L+DTLCK
Sbjct: 1 MLKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCK 60
Query: 216 EGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVIS 274
V A V +K I PN T++ I G CK R+ +A+ + EM +P VI+
Sbjct: 61 NRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVIT 120
Query: 275 YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
+S +I +Y ++ SKV + M PNV TY++++ L +EAI++ + M
Sbjct: 121 FSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMI 180
Query: 335 IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHH 394
G P+ ++ L ++SRV + + + +MP+ GVA +T + NT+I + G
Sbjct: 181 SKGCTPNVVTYSTLANGFFKSSRVDDGIKLLD-DMPQRGVAANTVSCNTLIKGYFQAGKI 239
Query: 395 EKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTY 454
+ A V M PN+++++ +L F G+ ++ LS+ + + K LDI TY
Sbjct: 240 DLALGVFGYMTS-NGLIPNIRSYNIVLAGLFANGEVEKALSRF--EHMQKTRNDLDIITY 296
Query: 455 TLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
T++IHG+C+A + AY LF ++ + P ++ +++ E+ + M A+ + +K
Sbjct: 297 TIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADALNRFYQK 356
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 142/307 (46%), Gaps = 4/307 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G + + +++D L K R + +L+ M +G + T + ++ +G+ DA
Sbjct: 43 GIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADA 102
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHG 246
R E+ + + N T + L+D K GK+ SV+ + ++ I PN T++ I+G
Sbjct: 103 ERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYG 162
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C NRVDEA + M GC P V++YST+ + + +LLD+M +G N
Sbjct: 163 LCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAAN 222
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
V+ T++ ++G + A+ + M G P+ R +N ++ L V++A+ ++
Sbjct: 223 TVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFE 282
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
M + D T+ MI ++A+ + ++ K + +P+ + + ++ +
Sbjct: 283 -HMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKL-KFKRVEPDFKAYTIMIAELNR 340
Query: 427 TGKTDEC 433
G E
Sbjct: 341 AGMRTEA 347
>gi|4455203|emb|CAB36526.1| putative protein [Arabidopsis thaliana]
gi|7269532|emb|CAB79535.1| putative protein [Arabidopsis thaliana]
Length = 439
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 105/405 (25%), Positives = 201/405 (49%), Gaps = 8/405 (1%)
Query: 114 WKSALGIFRWAGSCPGYEHSSEIY--EMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNT 170
+ + +++ + G E S ++Y ++V+ + Q + L +M K G + T
Sbjct: 26 YDVVINLWKRIENAEGIEISPDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVT 85
Query: 171 IAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK 230
+ ++ F + +DAV ++ G++++ +L+DTLCK V A V +K
Sbjct: 86 ASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMK 145
Query: 231 S-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFS 289
I PN T++ I G CK R+ +A+ + EM +P VI++S +I +Y ++ S
Sbjct: 146 DRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLS 205
Query: 290 KVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
KV + M PNV TY++++ L +EAI++ + M G P+ ++ L
Sbjct: 206 KVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLA 265
Query: 350 YTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH 409
++SRV + + + +MP+ GVA +T + NT+I + G + A V M
Sbjct: 266 NGFFKSSRVDDGIKLLD-DMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTS-NG 323
Query: 410 CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEW 469
PN+++++ +L F G+ ++ LS+ + + K LDI TYT++IHG+C+A +
Sbjct: 324 LIPNIRSYNIVLAGLFANGEVEKALSRF--EHMQKTRNDLDIITYTIMIHGMCKACMVKE 381
Query: 470 AYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
AY LF ++ + P ++ +++ E+ + M A+ + +K
Sbjct: 382 AYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADALNRFYQK 426
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 147/319 (46%), Gaps = 6/319 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G + + +++D L K R + +L+ M +G + T + ++ +G+ DA
Sbjct: 113 GIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADA 172
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHG 246
R E+ + + N T + L+D K GK+ SV+ + ++ I PN T++ I+G
Sbjct: 173 ERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYG 232
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C NRVDEA + M GC P V++YST+ + + +LLD+M +G N
Sbjct: 233 LCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAAN 292
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
V+ T++ ++G + A+ + M G P+ R +N ++ L V++A+ ++
Sbjct: 293 TVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFE 352
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
M + D T+ MI ++A+ + ++ K + +P+ + + ++ +
Sbjct: 353 -HMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKL-KFKRVEPDFKAYTIMIAELNR 410
Query: 427 TGKTDECLSQLLDDMVNKH 445
G E + L+ KH
Sbjct: 411 AGMRTE--ADALNRFYQKH 427
>gi|223635627|sp|Q9SZ20.2|PP339_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g26800
Length = 514
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 105/405 (25%), Positives = 201/405 (49%), Gaps = 8/405 (1%)
Query: 114 WKSALGIFRWAGSCPGYEHSSEIY--EMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNT 170
+ + +++ + G E S ++Y ++V+ + Q + L +M K G + T
Sbjct: 101 YDVVINLWKRIENAEGIEISPDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVT 160
Query: 171 IAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK 230
+ ++ F + +DAV ++ G++++ +L+DTLCK V A V +K
Sbjct: 161 ASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMK 220
Query: 231 S-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFS 289
I PN T++ I G CK R+ +A+ + EM +P VI++S +I +Y ++ S
Sbjct: 221 DRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLS 280
Query: 290 KVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
KV + M PNV TY++++ L +EAI++ + M G P+ ++ L
Sbjct: 281 KVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLA 340
Query: 350 YTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH 409
++SRV + + + +MP+ GVA +T + NT+I + G + A V M
Sbjct: 341 NGFFKSSRVDDGIKLLD-DMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTS-NG 398
Query: 410 CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEW 469
PN+++++ +L F G+ ++ LS+ + + K LDI TYT++IHG+C+A +
Sbjct: 399 LIPNIRSYNIVLAGLFANGEVEKALSRF--EHMQKTRNDLDIITYTIMIHGMCKACMVKE 456
Query: 470 AYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
AY LF ++ + P ++ +++ E+ + M A+ + +K
Sbjct: 457 AYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADALNRFYQK 501
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 147/319 (46%), Gaps = 6/319 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G + + +++D L K R + +L+ M +G + T + ++ +G+ DA
Sbjct: 188 GIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADA 247
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHG 246
R E+ + + N T + L+D K GK+ SV+ + ++ I PN T++ I+G
Sbjct: 248 ERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYG 307
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C NRVDEA + M GC P V++YST+ + + +LLD+M +G N
Sbjct: 308 LCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAAN 367
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
V+ T++ ++G + A+ + M G P+ R +N ++ L V++A+ ++
Sbjct: 368 TVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFE 427
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
M + D T+ MI ++A+ + ++ K + +P+ + + ++ +
Sbjct: 428 -HMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKL-KFKRVEPDFKAYTIMIAELNR 485
Query: 427 TGKTDECLSQLLDDMVNKH 445
G E + L+ KH
Sbjct: 486 AGMRTE--ADALNRFYQKH 502
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 109/288 (37%), Gaps = 75/288 (26%)
Query: 273 ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE-------- 324
I Y +++S F + L M P++V + V++ +AK ++
Sbjct: 51 IDYREVLRSGLHNIKFDDAFHLFVLMAYSYPLPSIVEFNKVLTAIAKMQMYDVVINLWKR 110
Query: 325 ----EAIRITE--------------------------KMKIVGSKPDSRFFNCLIYTLGR 354
E I I+ KM +G +PD + L+
Sbjct: 111 IENAEGIEISPDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCL 170
Query: 355 ASRVQEAVYVY-QVE---------------------------------MPENGVAPDTST 380
++ +++AVYV Q+E M + G++P+ T
Sbjct: 171 SNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVT 230
Query: 381 FNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDD 440
++++IT G A L EM+ + PNV TF L+ + K GK + S +
Sbjct: 231 YSSLITGLCKSGRLADAERRLHEMDS-KKINPNVITFSALIDAYAKRGKLSKVDS--VYK 287
Query: 441 MVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
M+ + + ++ TY+ +I+GLC N+ + A + MI TP T
Sbjct: 288 MMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVT 335
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 181/382 (47%), Gaps = 17/382 (4%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
+ ++++ L KV ++++ ++E+M +++T NT+ + G+ A
Sbjct: 166 FNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILK 225
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKIN 251
E+ G+ N T N+L+D CK+ V A VF E+ + + PN T+N I+G C
Sbjct: 226 EMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNG 285
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
+V+EA +M P +I+++ ++ +C+ + EL D+M QG PNV TY
Sbjct: 286 KVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYN 345
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
++ K + E+A + M G PD +NCLI L R ++ A + EM
Sbjct: 346 ILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVS-EMDT 404
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
+ D T+N +I + G +KA +L+EM + + KP+ T++ ++ K G
Sbjct: 405 KHLKADLITYNILIDSLCNKGEMKKALRLLDEMCR-KGLKPSQLTYNTMIDGYCKEGNLR 463
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRL 491
L+ L + K ++ TY ++I G C+ +K E A L EM+ + P T +
Sbjct: 464 AALN--LRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEI 521
Query: 492 ILDEVKQK--------HMYDAA 505
+ +E+ +K H+Y A
Sbjct: 522 VTEEMMEKGFVPDIEGHLYKVA 543
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 174/357 (48%), Gaps = 8/357 (2%)
Query: 163 GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELA 222
G +++ + +M G+ D + E+ +E + N++++ LCK GK+ A
Sbjct: 123 GLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKA 182
Query: 223 RSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDE---AQWTIQEMKGHGCHPCVISYSTI 278
+ ++K + N T+N I G+CK+ ++ + A ++EM+ G P ++++ +
Sbjct: 183 GDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNIL 242
Query: 279 IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
I +C+ N S ++ EM QG PNVVTY ++++ L +G EA + ++M
Sbjct: 243 IDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCL 302
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
KP+ N L+ + V++A ++ +MP+ G+ P+ +T+N +I + + E AF
Sbjct: 303 KPNIITHNALLNGFCKNKMVKQAGELFD-DMPKQGITPNVTTYNILIDAYCKDENMEDAF 361
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
+ M C P+V T++ L+ + G E L+ +M KH L D+ TY ++I
Sbjct: 362 ALYRIMLGKGVC-PDVSTYNCLIAGLCRKGDL-EAARNLVSEMDTKH-LKADLITYNILI 418
Query: 459 HGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
LC + + A L EM + P T ++D ++ AA + + M+K+
Sbjct: 419 DSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKV 475
>gi|422293946|gb|EKU21246.1| hypothetical protein NGA_2092600 [Nannochloropsis gaditana CCMP526]
Length = 659
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 168/330 (50%), Gaps = 6/330 (1%)
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHT 239
A +W +A+ E+ GL + + N +D L K G+ +LA +F E++ PN +
Sbjct: 239 ARRWREALGVLREMQARGLRPDLVSFNTAMDALGKAGQYDLALELFTEIEDHGFAPNLVS 298
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM- 298
+N IH + VD A ++EM+G P +SY+T++ ++ ++ + ELL EM
Sbjct: 299 YNTAIHACGRAGMVDRAHELLREMQGLSVRPDSVSYNTVMAAFAKKNQWKAALELLAEMK 358
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRV 358
+A G P++++Y T M AK+G +E A + + G +PD +N +++ GRA
Sbjct: 359 EAPGVDPDLISYNTAMHVCAKAGRWERATELLTEALGQGLQPDVVSYNTVMHACGRAGEY 418
Query: 359 QEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFH 418
+A+ ++ + M E GVAPD +FNT + + + A +L EM + PNV+++
Sbjct: 419 LQALDLFGM-MEEVGVAPDRVSFNTAMHACNRALKWQAALQILREM-EARSIAPNVKSYT 476
Query: 419 PLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
+ +C + G+ + L +L+++M + ++ TYT + CR + +L +EM
Sbjct: 477 IAVDACGRAGEWERAL-ELMEEM-EVRGVPANVHTYTAAMDACCRGGAVDRVLVLLEEMD 534
Query: 479 GHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
G + P + + +D + + +D A +
Sbjct: 535 GKGVEPNVVSYTIAMDAMNRVGKWDRASAV 564
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 132/267 (49%), Gaps = 5/267 (1%)
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
F + I + R EA ++EM+ G P ++S++T + + + + EL E++
Sbjct: 229 FTMAIKACGQARRWREALGVLREMQARGLRPDLVSFNTAMDALGKAGQYDLALELFTEIE 288
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
G PN+V+Y T + ++G + A + +M+ + +PDS +N ++ + ++ +
Sbjct: 289 DHGFAPNLVSYNTAIHACGRAGMVDRAHELLREMQGLSVRPDSVSYNTVMAAFAKKNQWK 348
Query: 360 EAVYVYQVEMPEN-GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFH 418
A+ + EM E GV PD ++NT + + + G E+A +L E + +P+V +++
Sbjct: 349 AALELL-AEMKEAPGVDPDLISYNTAMHVCAKAGRWERATELLTEALG-QGLQPDVVSYN 406
Query: 419 PLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
++ +C + G+ + L L M+ + ++ D ++ +H RA K + A + +EM
Sbjct: 407 TVMHACGRAGEYLQALD--LFGMMEEVGVAPDRVSFNTAMHACNRALKWQAALQILREME 464
Query: 479 GHDITPRYQTCRLILDEVKQKHMYDAA 505
I P ++ + +D + ++ A
Sbjct: 465 ARSIAPNVKSYTIAVDACGRAGEWERA 491
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 109/213 (51%), Gaps = 3/213 (1%)
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
V+ ++ I++ + + + +L EMQA+G P++V++ T M L K+G ++ A+ +
Sbjct: 226 VVGFTMAIKACGQARRWREALGVLREMQARGLRPDLVSFNTAMDALGKAGQYDLALELFT 285
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHH 391
+++ G P+ +N I+ GRA V A + + EM V PD+ ++NT++ F+
Sbjct: 286 EIEDHGFAPNLVSYNTAIHACGRAGMVDRAHELLR-EMQGLSVRPDSVSYNTVMAAFAKK 344
Query: 392 GHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDI 451
+ A +L EM + P++ +++ + C K G+ + ++LL + + + L D+
Sbjct: 345 NQWKAALELLAEMKEAPGVDPDLISYNTAMHVCAKAGRWERA-TELLTEALGQ-GLQPDV 402
Query: 452 TTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
+Y V+H RA + A LF M + P
Sbjct: 403 VSYNTVMHACGRAGEYLQALDLFGMMEEVGVAP 435
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 123/269 (45%), Gaps = 10/269 (3%)
Query: 95 AIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQ 152
+++P N ++ F K+ WK+AL + PG + Y + + K + ++
Sbjct: 326 SVRPDSVSYNTVMAAFAKKNQWKAALELLAEMKEAPGVDPDLISYNTAMHVCAKAGRWER 385
Query: 153 MRALL-EEMSKG---HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNL 208
LL E + +G +V+ NT+ R AG++ A+ F + G+ + + N
Sbjct: 386 ATELLTEALGQGLQPDVVSYNTVMHACGR---AGEYLQALDLFGMMEEVGVAPDRVSFNT 442
Query: 209 LLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG 267
+ + K + A + E+++ I PN ++ I + + + A ++EM+ G
Sbjct: 443 AMHACNRALKWQAALQILREMEARSIAPNVKSYTIAVDACGRAGEWERALELMEEMEVRG 502
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
V +Y+ + + CR +V LL+EM +G PNVV+YT M + + G ++ A
Sbjct: 503 VPANVHTYTAAMDACCRGGAVDRVLVLLEEMDGKGVEPNVVSYTIAMDAMNRVGKWDRAS 562
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRAS 356
+ E+M G + DS + + T GRA
Sbjct: 563 AVLEQMVQRGLRLDSVSYRTALSTAGRAG 591
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 120/276 (43%), Gaps = 9/276 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIA--KVMRRFSGAGQWEDAVRTFDEL 194
Y ++ K Q LL EM + V + I+ M + AG+WE A E
Sbjct: 334 YNTVMAAFAKKNQWKAALELLAEMKEAPGVDPDLISYNTAMHVCAKAGRWERATELLTEA 393
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRV 253
GL+ + + N ++ + G+ A +F ++ + P+ +FN +H + +
Sbjct: 394 LGQGLQPDVVSYNTVMHACGRAGEYLQALDLFGMMEEVGVAPDRVSFNTAMHACNRALKW 453
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
A ++EM+ P V SY+ + + R + + EL++EM+ +G P NV TYT
Sbjct: 454 QAALQILREMEARSIAPNVKSYTIAVDACGRAGEWERALELMEEMEVRGVPANVHTYTAA 513
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
M + G + + + E+M G +P+ + + + R + A V + +M + G
Sbjct: 514 MDACCRGGAVDRVLVLLEEMDGKGVEPNVVSYTIAMDAMNRVGKWDRASAVLE-QMVQRG 572
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH 409
+ D+ ++ T ++ G E E + K+ H
Sbjct: 573 LRLDSVSYRTALSTAGRAGDEEG-----ERLTKIVH 603
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 99/201 (49%), Gaps = 6/201 (2%)
Query: 284 RQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSR 343
R+ ++++ +LD A +VV +T + ++ + EA+ + +M+ G +PD
Sbjct: 206 RRRDWTRALTVLD---APLIEVDVVGFTMAIKACGQARRWREALGVLREMQARGLRPDLV 262
Query: 344 FFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEE 403
FN + LG+A + A+ ++ E+ ++G AP+ ++NT I G ++A +L E
Sbjct: 263 SFNTAMDALGKAGQYDLALELF-TEIEDHGFAPNLVSYNTAIHACGRAGMVDRAHELLRE 321
Query: 404 MNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCR 463
M L +P+ +++ ++ + K + L +LL +M + D+ +Y +H +
Sbjct: 322 MQGLS-VRPDSVSYNTVMAAFAKKNQWKAAL-ELLAEMKEAPGVDPDLISYNTAMHVCAK 379
Query: 464 ANKCEWAYLLFKEMIGHDITP 484
A + E A L E +G + P
Sbjct: 380 AGRWERATELLTEALGQGLQP 400
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 72/174 (41%), Gaps = 7/174 (4%)
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
D N ++Y R A+ V + E D F I +A V
Sbjct: 193 DRALVNFVLYNCMRRRDWTRALTVLDAPLIE----VDVVGFTMAIKACGQARRWREALGV 248
Query: 401 LEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHG 460
L EM + +P++ +F+ + + K G+ D L + + H + ++ +Y IH
Sbjct: 249 LREM-QARGLRPDLVSFNTAMDALGKAGQYDLALELFTE--IEDHGFAPNLVSYNTAIHA 305
Query: 461 LCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
RA + A+ L +EM G + P + ++ +K+ + AA ++ A MK+
Sbjct: 306 CGRAGMVDRAHELLREMQGLSVRPDSVSYNTVMAAFAKKNQWKAALELLAEMKE 359
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 187/384 (48%), Gaps = 17/384 (4%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQW 184
G + + +Y ++++L + +M + ++ EM K +VT NT+ K + R A Q
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCR---AHQV 197
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSV---FLELKSCIPPNAHTFN 241
AV +E+ + G+ + T L+ +EG +E A V LE+ C T N
Sbjct: 198 RTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEM-GCSATKV-TVN 255
Query: 242 IFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ 301
+ I+G+CK+ RV++A IQ+ G P I+Y+T + C+ + +++D M +
Sbjct: 256 VLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQE 315
Query: 302 GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
G P+V TY V++ L K+G EEA I +M G PD FN LI L +R++EA
Sbjct: 316 GHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEA 375
Query: 362 VYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLL 421
+ + + ++ GV+PD TFN +I G A + EEM K C P+ T++ L+
Sbjct: 376 LDLAR-QVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM-KNSGCTPDEVTYNTLI 433
Query: 422 KSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHD 481
+ GK + L LL DM TY +I GLC+ + E A +F +M
Sbjct: 434 DNLCSLGKLGKALD-LLKDM-ESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQG 491
Query: 482 ITPRYQTCRLILDEV-KQKHMYDA 504
I+ T ++D + K K + DA
Sbjct: 492 ISRNAITFNTLIDGLCKDKKIDDA 515
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 190/391 (48%), Gaps = 8/391 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G++ Y ++V+ L K Q+++ + +L +M +G + + T ++ + E+A
Sbjct: 316 GHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEA 375
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHG 246
+ ++ G+ + T N+L++ LCK G LA +F E+K S P+ T+N I
Sbjct: 376 LDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDN 435
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C + ++ +A +++M+ GC I+Y+TII C++ + E+ D+M QG N
Sbjct: 436 LCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRN 495
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
+T+ T++ L K ++A + +M G +P++ +N ++ + +++A + +
Sbjct: 496 AITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILE 555
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
M NG D T+ T+I G + A VL M +++ +P + ++P+L+S F+
Sbjct: 556 T-MTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGM-RIKGMRPTPKAYNPVLQSLFR 613
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANK-CEWAYLLFKEMIGHDITPR 485
+ LS L +M D TY +V GLCR + A+ EM+ P
Sbjct: 614 RNNIRDALS-LFREMAEVGEPP-DALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPE 671
Query: 486 YQTCRLILDEVKQKHMYDA-AEKIEAVMKKL 515
+ + R++ + + M D IE +M+K+
Sbjct: 672 FSSFRMLAEGLLNLGMDDYFIRAIEIIMEKV 702
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 187/392 (47%), Gaps = 8/392 (2%)
Query: 109 RFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVT 167
R + D +AL + A + + E+YE ++ LG V +D M+ L+ EM + GH V
Sbjct: 49 REQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVK 108
Query: 168 LNTIAKVMRRFSGAGQWEDAVR-TFDELGT-FGLEKNTETMNLLLDTLCKEGKVELARSV 225
L + + + G ++DAV ++L FG++ +T N LL+ L + K++L SV
Sbjct: 109 LGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESV 168
Query: 226 FLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCR 284
+ E+ + I P+ TFN + C+ ++V A ++EM G P +++T++Q +
Sbjct: 169 YSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVE 228
Query: 285 QYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRF 344
+ + + M GC VT +++ K G E+A+ ++ G +PD
Sbjct: 229 EGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQIT 288
Query: 345 FNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
+N + L + V A+ V V M + G PD T+N ++ +G E+A +L +M
Sbjct: 289 YNTFVNGLCQNDHVGHALKVMDV-MVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 347
Query: 405 NKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRA 464
C P++ TF+ L+ + + +E L L V +S D+ T+ ++I+ LC+
Sbjct: 348 VD-RGCLPDITTFNTLIAALCTGNRLEEALD--LARQVTVKGVSPDVYTFNILINALCKV 404
Query: 465 NKCEWAYLLFKEMIGHDITPRYQTCRLILDEV 496
A LF+EM TP T ++D +
Sbjct: 405 GDPHLALRLFEEMKNSGCTPDEVTYNTLIDNL 436
>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 193/396 (48%), Gaps = 12/396 (3%)
Query: 126 SCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQW 184
S G Y +V L KV + + ++ EM + G + + ++ ++ G
Sbjct: 277 SYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNI 336
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIF 243
A +++ FG+ + N L++++CK+GK++ A S+F + + PN T++I
Sbjct: 337 GSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSIL 396
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
I +CK ++D A + +M G V YS++I +C+ L DEM A G
Sbjct: 397 IDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGL 456
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
PNVV YT+++S K G+ A R+ +M G P++ F LI L A+R+ EA
Sbjct: 457 KPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANK 516
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
++ EM E V P+ T+N +I G+ +AF +L+EM + + P+ T+ PL+
Sbjct: 517 LFG-EMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVE-KGLVPDTYTYRPLISG 574
Query: 424 CFKTGKTDECLSQLLDDM------VNKHHLSL-DITTYTLVIHGLCRANKCEWAYLLFKE 476
TG+ E + ++D+ +N+ L ++ TYT +I+GLC+ + A LL +E
Sbjct: 575 LCSTGRVSEA-REFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCRE 633
Query: 477 MIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
M+ + P T LD + + + A ++ V+
Sbjct: 634 MLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVL 669
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 165/366 (45%), Gaps = 5/366 (1%)
Query: 148 RQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN 207
R++D + + M G + + T++ V+ Q+ A+ FDE+ + GL +
Sbjct: 160 RELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYT 219
Query: 208 LLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
++ +LC+ AR V ++S + T+N+FI G CK RV EA +
Sbjct: 220 AVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYK 279
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
G V +Y T++ C+ F E+++EM G P+ + ++ L K G+ A
Sbjct: 280 GLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSA 339
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
+ K+K G P +N LI ++ + ++ EA ++ M G+ P+ T++ +I
Sbjct: 340 FDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFN-NMGHKGLFPNDVTYSILID 398
Query: 387 MFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHH 446
F G + A H L +M ++ K V + L+ K GK S L D+M+ +
Sbjct: 399 SFCKRGKLDVALHFLGKMTEV-GIKATVYPYSSLISGHCKLGKLRAAKS-LFDEMI-ANG 455
Query: 447 LSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAE 506
L ++ YT +I G C+ + A+ L+ EM G I+P T ++ + + A
Sbjct: 456 LKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEAN 515
Query: 507 KIEAVM 512
K+ M
Sbjct: 516 KLFGEM 521
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 157/352 (44%), Gaps = 22/352 (6%)
Query: 85 QSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVD 142
+SL + + N ++P+ + LI + + + +A ++ + G ++ + ++
Sbjct: 445 KSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEM-TGKGISPNTYTFTALIS 503
Query: 143 ILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTF---DELGTFGL 199
L +M + L EM + +++ V+ G + + VR F DE+ GL
Sbjct: 504 GLCHANRMAEANKLFGEMVEWNVIPNEVTYNVL--IEGHCKEGNTVRAFELLDEMVEKGL 561
Query: 200 EKNTETMNLLLDTLCKEGKVELARSV----------FLELKSCIPPNAHTFNIFIHGWCK 249
+T T L+ LC G+V AR E++ C+P N T+ I+G CK
Sbjct: 562 VPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLP-NVVTYTALINGLCK 620
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
I +D+A+ +EM P +Y+ + + N K +L D + +G N VT
Sbjct: 621 IGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVL-LEGFLANTVT 679
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM 369
Y ++ K G +EA + M G PD ++ +IY R ++EA+ +++ M
Sbjct: 680 YNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWE-SM 738
Query: 370 PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLL 421
GV PDT +N +I G KAF + ++M + KPN T++ L+
Sbjct: 739 LNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMR-RGVKPNRATYNSLI 789
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 100/217 (46%), Gaps = 8/217 (3%)
Query: 134 SEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDE 193
SE E M D+ G+ ++++++ L + + +N + K+ G + A E
Sbjct: 582 SEAREFMNDLQGEQQKLNEIEGCLPNVVT-YTALINGLCKI-------GLMDKAELLCRE 633
Query: 194 LGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRV 253
+ N T LD L EG +E A + L N T+NI I G+CK+ R+
Sbjct: 634 MLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRI 693
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
EA + M G P ISYSTII YCR+ + + +L + M +G P+ V Y +
Sbjct: 694 QEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFL 753
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIY 350
+ +G+ +A + + M G KP+ +N LI+
Sbjct: 754 IYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIH 790
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 107/266 (40%), Gaps = 4/266 (1%)
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
F++ I + + R + ++ M G P + + S ++ R F L DE+
Sbjct: 148 FDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIV 207
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
+ G P+V YT V+ L + DF A + +M+ G +N I L + RV
Sbjct: 208 SSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVW 267
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
EAV + + + G+ D T+ T++ E ++ EM + P+
Sbjct: 268 EAVEIKNL-LSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFV-PSEAAVSN 325
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
L+ K G L + V K ++ + Y +I+ +C+ K + A LF M
Sbjct: 326 LVDGLRKKGNIGSAFD--LVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGH 383
Query: 480 HDITPRYQTCRLILDEVKQKHMYDAA 505
+ P T +++D ++ D A
Sbjct: 384 KGLFPNDVTYSILIDSFCKRGKLDVA 409
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 36/191 (18%), Positives = 82/191 (42%), Gaps = 4/191 (2%)
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTM 384
+ + + M G P R + ++ L R + + A++++ E+ +G+ PD + +
Sbjct: 163 DGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFD-EIVSSGLRPDVYVYTAV 221
Query: 385 ITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK 444
+ +A V+ M C +V T++ ++ K + E + + ++++
Sbjct: 222 VRSLCELKDFIRAREVIGRMES-SGCDLSVATYNVFIRGLCKNQRVWEAVE--IKNLLSY 278
Query: 445 HHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDA 504
L D+ TY ++ GLC+ + E + EMI P ++D +++K +
Sbjct: 279 KGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGS 338
Query: 505 AEKIEAVMKKL 515
A + +KK
Sbjct: 339 AFDLVNKVKKF 349
>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
Length = 579
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 122/448 (27%), Positives = 215/448 (47%), Gaps = 30/448 (6%)
Query: 69 VIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLI------HRFKDDWKSALGIFR 122
V+ +G +E E+F ++ + P Y N +I RF+D +K L R
Sbjct: 27 VLCKAGRLGEAE-ELFAQMEAERSV----PCAYAYNTMIMGYGSAGRFEDAYK-LLERLR 80
Query: 123 WAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAG 182
G P S + ++ LGK R++D+ +L E M K +T ++ G
Sbjct: 81 ERGCIP----SVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGG 136
Query: 183 QWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTF 240
+ E+A R DE+ L N T+N+++D LCK K+E A +F + C P+ T+
Sbjct: 137 RVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGC-NPDCVTY 195
Query: 241 NIFIHGWCKINRVDEAQWTIQEM--KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
I G K +VDEA ++M GH +P V Y+++I+++ +++ E+
Sbjct: 196 CSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVV--YTSLIRNFFIHGRKEDGHKIFKEL 253
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRV 358
+GC P++ T M + K+G+ E+ I E ++ G PD R ++ LI+ L +A +
Sbjct: 254 IRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQA 313
Query: 359 QEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHC-KPNVQTF 417
+E ++ M + G A D +N ++ F G KA+ +LEEM E C +P V T+
Sbjct: 314 RETSNIFHA-MKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMK--EKCVQPTVATY 370
Query: 418 HPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
++ K + DE + +L + + L++ Y+ +I G + + + AYL+ +EM
Sbjct: 371 GAIVDGLAKIDRLDE--AYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEM 428
Query: 478 IGHDITPRYQTCRLILDE-VKQKHMYDA 504
+ +TP T +LD VK + + +A
Sbjct: 429 MKKGLTPNVYTWNSLLDALVKAEEINEA 456
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/428 (26%), Positives = 197/428 (46%), Gaps = 12/428 (2%)
Query: 62 PRLPDIDVIISKVHVGSSEDEVFQSLKQ-DHVCNAIQPSHYLVNKLIHRF--KDDWKSAL 118
P ++II + +G +E ++ L + +H ++ P+ VN ++ R + A
Sbjct: 120 PNSSTYNIIIDMLCLGGRVEEAYRILDEMEHA--SLFPNLLTVNIMVDRLCKARKLEEAY 177
Query: 119 GIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRR 177
IF A S G Y ++D LGK Q+D+ L E+M GH ++R
Sbjct: 178 KIFESA-SQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRN 236
Query: 178 FSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPN 236
F G+ ED + F EL G + + +N +D + K G+VE R +F +++S P+
Sbjct: 237 FFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPD 296
Query: 237 AHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLD 296
+++I IHG K + E MK G +Y+ ++ +C+ K YE+L+
Sbjct: 297 VRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILE 356
Query: 297 EMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRAS 356
EM+ + P V TY ++ LAK +EA + E+ K G + + ++ LI G+
Sbjct: 357 EMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVG 416
Query: 357 RVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQT 416
R+ EA Y+ EM + G+ P+ T+N+++ +A + M +++ C PN T
Sbjct: 417 RIDEA-YLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMK-CPPNTYT 474
Query: 417 FHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKE 476
+ L+ + K ++ D + K L ++ TYT +I GL + AY LF+
Sbjct: 475 YSILINGLCRVQKYNKAFVFWQD--MQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFER 532
Query: 477 MIGHDITP 484
+ P
Sbjct: 533 FKANGGIP 540
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 167/370 (45%), Gaps = 5/370 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVM-RRFSGAGQWEDAVRTFDELG 195
Y M+ +L K ++ + L +M V M + AG++EDA + + L
Sbjct: 21 YTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLR 80
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDE 255
G + + N +L L K+ KV+ A S+F +K PN+ T+NI I C RV+E
Sbjct: 81 ERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEE 140
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
A + EM+ P +++ + ++ C+ + Y++ + +GC P+ VTY +++
Sbjct: 141 AYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLID 200
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
L K G +EA R+ EKM G + + LI R ++ +++ E+ G
Sbjct: 201 GLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFK-ELIRRGCK 259
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS 435
PD + NT + G EK + E++ P+V+++ L+ K G+ E S
Sbjct: 260 PDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFL-PDVRSYSILIHGLTKAGQARET-S 317
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE 495
+ M + +LD Y V+ G C++ K AY + +EM + P T I+D
Sbjct: 318 NIFHAM-KQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDG 376
Query: 496 VKQKHMYDAA 505
+ + D A
Sbjct: 377 LAKIDRLDEA 386
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 166/359 (46%), Gaps = 8/359 (2%)
Query: 67 IDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGS 126
ID + K V + + L H N + + + N IH K+D G
Sbjct: 199 IDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGC 258
Query: 127 CPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWE 185
P + +D + K ++++ R + E++ S G + + + + ++ + AGQ
Sbjct: 259 KP----DLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQAR 314
Query: 186 DAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFI 244
+ F + G + N ++D CK GKV A + E+K C+ P T+ +
Sbjct: 315 ETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIV 374
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
G KI+R+DEA +E K G V+ YS++I + + + Y +L+EM +G
Sbjct: 375 DGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLT 434
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
PNV T+ +++ L K+ + EA+ + MK + P++ ++ LI L R + +A +V
Sbjct: 435 PNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKA-FV 493
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
+ +M + G+ P+ T+ TMI+ + G+ A+ + E K P+ +F+ L++
Sbjct: 494 FWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERF-KANGGIPDAASFNALIEG 551
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 120/235 (51%), Gaps = 2/235 (0%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDA 187
G+ + Y +VD K ++ + +LEEM + + T+ T ++ + + ++A
Sbjct: 327 GFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEA 386
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHG 246
F+E + G+E N + L+D K G+++ A + E+ K + PN +T+N +
Sbjct: 387 YMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDA 446
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
K ++EA Q MK C P +YS +I CR ++K + +MQ QG PN
Sbjct: 447 LVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPN 506
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
VVTYTT++S LAK G+ +A + E+ K G PD+ FN LI + A+R EA
Sbjct: 507 VVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEA 561
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 138/288 (47%), Gaps = 12/288 (4%)
Query: 221 LARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
+A F ELK+ + P+ ++ I CK R+ EA+ +M+ PC +Y+T+I
Sbjct: 1 MAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMI 60
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
Y F Y+LL+ ++ +GC P+VV++ ++++ L K +EA+ + E MK ++
Sbjct: 61 MGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK-KDAE 119
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
P+S +N +I L RV+EA + EM + P+ T N M+ E+A+
Sbjct: 120 PNSSTYNIIIDMLCLGGRVEEAYRILD-EMEHASLFPNLLTVNIMVDRLCKARKLEEAYK 178
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIH 459
+ E ++ C P+ T+ L+ K G+ DE +L + M++ H + + YT +I
Sbjct: 179 IFESASQ-RGCNPDCVTYCSLIDGLGKKGQVDEAY-RLFEKMLDAGH-NANPVVYTSLIR 235
Query: 460 GLCRANKCEWAYLLFKEMIGHDITP------RYQTCRLILDEVKQKHM 501
+ E + +FKE+I P Y C EV++ M
Sbjct: 236 NFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRM 283
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 146/326 (44%), Gaps = 39/326 (11%)
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIP-PNAHTFNIFIH 245
A + F EL GL+ + + ++ LCK G++ A +F ++++ P A+ +N I
Sbjct: 2 AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVIS------------------------------- 274
G+ R ++A ++ ++ GC P V+S
Sbjct: 62 GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPN 121
Query: 275 ---YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
Y+ II C + Y +LDEM+ PN++T ++ L K+ EEA +I E
Sbjct: 122 SSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFE 181
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHH 391
G PD + LI LG+ +V EA +++ +M + G + + ++I F H
Sbjct: 182 SASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFE-KMLDAGHNANPVVYTSLIRNFFIH 240
Query: 392 GHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDI 451
G E + +E+ + CKP++ + + FK G+ ++ +++ + + + D+
Sbjct: 241 GRKEDGHKIFKELIR-RGCKPDLTLLNTYMDCVFKAGEVEK--GRMIFEDIRSYGFLPDV 297
Query: 452 TTYTLVIHGLCRANKCEWAYLLFKEM 477
+Y+++IHGL +A + +F M
Sbjct: 298 RSYSILIHGLTKAGQARETSNIFHAM 323
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 86/183 (46%), Gaps = 5/183 (2%)
Query: 326 AIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMI 385
A + ++K G KPD + +I+ L +A R+ EA ++ +M P +NTMI
Sbjct: 2 AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELF-AQMEAERSVPCAYAYNTMI 60
Query: 386 TMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKH 445
+ G E A+ +LE + + C P+V +F+ +L K K DE LS V K
Sbjct: 61 MGYGSAGRFEDAYKLLERLRE-RGCIPSVVSFNSILTCLGKKRKVDEALSLF---EVMKK 116
Query: 446 HLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
+ +TY ++I LC + E AY + EM + P T +++D + + + A
Sbjct: 117 DAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEA 176
Query: 506 EKI 508
KI
Sbjct: 177 YKI 179
>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 170/345 (49%), Gaps = 40/345 (11%)
Query: 135 EIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDE 193
E+Y ++D L K + + + L EM+ KG + T ++ F A + ++A+ +E
Sbjct: 200 EMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNE 259
Query: 194 LGTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCI------------------- 233
+ + N T N+L+D LCKEGKV+ A++V + LK+C+
Sbjct: 260 MVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYE 319
Query: 234 ----------------PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
P+ H++ I I+G+CK VDEA +EM P +++YS+
Sbjct: 320 LKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSS 379
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+I C+ S V++L+DEM+ +G P NV+TY +++ L K+G + AI + KMK G
Sbjct: 380 LIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQG 439
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKA 397
+P S F L+ L + R+++A +Q ++ G D +N MI G E+A
Sbjct: 440 IRPCSFTFTILLDGLCKGGRLKDAQEAFQ-DLLTKGYHLDVYKYNVMINGHCKQGLLEEA 498
Query: 398 FHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMV 442
+L +M + C PN TF ++ + FK + D+ +LL M+
Sbjct: 499 LTMLSKMEE-NGCVPNAVTFDIIINALFKKDENDKA-EKLLRQMI 541
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 168/359 (46%), Gaps = 12/359 (3%)
Query: 153 MRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDT 212
+R + ++K ++ NTI + ++ +A F E+ G+ + T L+
Sbjct: 187 VRKIDGRLTKPNVEMYNTIIDALCKYQ---LVSEAYGLFSEMTAKGISADVVTYTTLIYG 243
Query: 213 LCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPC 271
C K++ A + E+ I PN +T+NI + CK +V EA+ + M P
Sbjct: 244 FCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPD 303
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
VI+YST++ Y Y K + + M G P+V +YT +++ K+ +EA+ + +
Sbjct: 304 VITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFK 363
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV--EMPENGVAPDTSTFNTMITMFS 389
+M P ++ LI L ++ R+ YV+ + EM + G+ + T+N++I
Sbjct: 364 EMHQKNMVPGIVTYSSLIDGLCKSGRIS---YVWDLIDEMRDRGIPANVITYNSLIDGLC 420
Query: 390 HHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSL 449
+GH ++A + +M K + +P TF LL K G+ + D + +HL
Sbjct: 421 KNGHLDRAIALFNKM-KDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHL-- 477
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
D+ Y ++I+G C+ E A + +M + P T +I++ + +K D AEK+
Sbjct: 478 DVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKL 536
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 174/379 (45%), Gaps = 6/379 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
+ ++D K++ +L + KG L T+ ++ F GQ ++
Sbjct: 62 FNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKIL 121
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVD 254
G + +T T L+ LC +G+V A +L + I + ++ I+G CKI
Sbjct: 122 KRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTR 181
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
A ++++ G P V Y+TII + C+ S+ Y L EM A+G +VVTYTT++
Sbjct: 182 GAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLI 241
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
+ +EAI + +M + P+ +N L+ L + +V+EA V V M + V
Sbjct: 242 YGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAV-MLKACV 300
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
PD T++T++ + +KA HV M+ L P+V ++ L+ K DE L
Sbjct: 301 KPDVITYSTLMDGYFLVYELKKAQHVFNAMS-LMGVTPDVHSYTILINGFCKNKMVDEAL 359
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
+ L +M K+ + I TY+ +I GLC++ + + + L EM I T ++D
Sbjct: 360 N-LFKEMHQKNMVP-GIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLID 417
Query: 495 EVKQKHMYDAAEKIEAVMK 513
+ + D A + MK
Sbjct: 418 GLCKNGHLDRAIALFNKMK 436
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 122/265 (46%), Gaps = 4/265 (1%)
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
I VD+A M P +I ++ I+ S+ + ++S L ++ +G P+++T
Sbjct: 37 IQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLIT 96
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM 369
+++ G + K+ G +P + F LI L +V +A++ + ++
Sbjct: 97 LNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHD-KL 155
Query: 370 PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
G+ D ++ T+I G A ++ +++ KPNV+ ++ ++ + K
Sbjct: 156 LAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDG-RLTKPNVEMYNTIIDALCKYQL 214
Query: 430 TDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTC 489
E L +M K +S D+ TYT +I+G C A+K + A L EM+ I P T
Sbjct: 215 VSEAYG-LFSEMTAKG-ISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTY 272
Query: 490 RLILDEVKQKHMYDAAEKIEAVMKK 514
+++D + ++ A+ + AVM K
Sbjct: 273 NILVDALCKEGKVKEAKNVLAVMLK 297
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 124/274 (45%), Gaps = 17/274 (6%)
Query: 41 IESYCSDGARLDHHQVLCVDSPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNA----- 95
+++ C +G + VL V DVI + V++ K HV NA
Sbjct: 276 VDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLM-DGYFLVYELKKAQHVFNAMSLMG 334
Query: 96 IQPSHYLVNKLIHRFKDD--WKSALGIFR---WAGSCPGYEHSSEIYEMMVDILGKVRQM 150
+ P + LI+ F + AL +F+ PG Y ++D L K ++
Sbjct: 335 VTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIV----TYSSLIDGLCKSGRI 390
Query: 151 DQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLL 209
+ L++EM +G + T ++ G + A+ F+++ G+ + T +L
Sbjct: 391 SYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTIL 450
Query: 210 LDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGC 268
LD LCK G+++ A+ F +L + + + +N+ I+G CK ++EA + +M+ +GC
Sbjct: 451 LDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGC 510
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
P +++ II + ++ K +LL +M +G
Sbjct: 511 VPNAVTFDIIINALFKKDENDKAEKLLRQMICRG 544
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 209/407 (51%), Gaps = 17/407 (4%)
Query: 107 IHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDIL---GKVRQMDQMRALLEEMS-K 162
++R + W +FR S Y + +MV++L GK+++ + +E + K
Sbjct: 227 LNRMEMAWVLYAEMFRLRISSTVY-----TFNIMVNVLCKEGKLKKAREFIGFMEGLGFK 281
Query: 163 GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELA 222
++V+ NTI + +S G E A R D + G+E ++ T L+ +CKEG++E A
Sbjct: 282 PNVVSYNTI---IHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEA 338
Query: 223 RSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQS 281
+F ++ + + PNA T+N I G+C ++ A EM G P V +Y+ ++ +
Sbjct: 339 SGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHA 398
Query: 282 YCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPD 341
+ + +++ EM+ +G P+ +TY +++ ++ G+ ++A + +M G +P
Sbjct: 399 LFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPT 458
Query: 342 SRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVL 401
+ LIY L R +R++EA +++ ++ + GV+PD FN M+ +G+ E+AF +L
Sbjct: 459 HVTYTSLIYVLSRRNRMKEADDLFE-KILDQGVSPDVIMFNAMVDGHCANGNVERAFMLL 517
Query: 402 EEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGL 461
+EM++ + P+ TF+ L++ + GK +E +++L D + + + D +Y +I G
Sbjct: 518 KEMDR-KSVPPDEVTFNTLMQGRCREGKVEE--ARMLLDEMKRRGIKPDHISYNTLISGY 574
Query: 462 CRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
R + A+ + EM+ P T ++ + + D AE++
Sbjct: 575 GRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEEL 621
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 180/389 (46%), Gaps = 30/389 (7%)
Query: 133 SSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTF 191
SS +++++V + ++R+ D+ M KG + + T ++ F + E A +
Sbjct: 178 SSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLY 237
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSV--FLELKSCIPPNAHTFNIFIHGWCK 249
E+ + T N++++ LCKEGK++ AR F+E PN ++N IHG+
Sbjct: 238 AEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFME-GLGFKPNVVSYNTIIHGYSS 296
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
++ A+ + M+ G P +Y ++I C++ + L D+M G PN VT
Sbjct: 297 RGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVT 356
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM 369
Y T++ GD E A ++M G P +N L++ L R+ EA + + EM
Sbjct: 357 YNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIK-EM 415
Query: 370 PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
+ G+ PD T+N +I +S G+ +KAF + EM + +P T+ L+ + +
Sbjct: 416 RKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLS-KGIEPTHVTYTSLIYVLSRRNR 474
Query: 430 ---TDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP-- 484
D+ ++LD V S D+ + ++ G C E A++L KEM + P
Sbjct: 475 MKEADDLFEKILDQGV-----SPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDE 529
Query: 485 --------------RYQTCRLILDEVKQK 499
+ + R++LDE+K++
Sbjct: 530 VTFNTLMQGRCREGKVEEARMLLDEMKRR 558
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 148/327 (45%), Gaps = 51/327 (15%)
Query: 227 LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHP---------------- 270
L +KS I F++ + C++ R DEA MK G P
Sbjct: 174 LSVKSSI-----VFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLN 228
Query: 271 -------------------CVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
V +++ ++ C++ K E + M+ G PNVV+Y
Sbjct: 229 RMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYN 288
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
T++ + G+ E A RI + M++ G +PDS + LI + + R++EA ++ +M E
Sbjct: 289 TIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFD-KMVE 347
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
G+ P+ T+NT+I + + G E+AF +EM K + P+V T++ L+ + F G+
Sbjct: 348 IGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVK-KGIMPSVSTYNLLVHALFMEGRMG 406
Query: 432 ECLSQLLDDMVN---KHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
E DDM+ K + D TY ++I+G R + A+ L EM+ I P + T
Sbjct: 407 EA-----DDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVT 461
Query: 489 -CRLILDEVKQKHMYDAAEKIEAVMKK 514
LI ++ M +A + E ++ +
Sbjct: 462 YTSLIYVLSRRNRMKEADDLFEKILDQ 488
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 160/369 (43%), Gaps = 44/369 (11%)
Query: 95 AIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQ 152
+P+ N +IH + + + + A I A G E S Y ++ + K ++++
Sbjct: 279 GFKPNVVSYNTIIHGYSSRGNIEGARRILD-AMRVKGIEPDSYTYGSLISGMCKEGRLEE 337
Query: 153 MRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLD 211
L ++M + G + T ++ + G E A DE+ G+ + T NLL+
Sbjct: 338 ASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVH 397
Query: 212 TLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKI-------------------- 250
L EG++ A + E+ K I P+A T+NI I+G+ +
Sbjct: 398 ALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEP 457
Query: 251 ---------------NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
NR+ EA +++ G P VI ++ ++ +C N + + LL
Sbjct: 458 THVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLL 517
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
EM + PP+ VT+ T+M + G EEA + ++MK G KPD +N LI GR
Sbjct: 518 KEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRR 577
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM-NKLEHCKPNV 414
+++A V EM G P T+N +I + + A +L+EM NK P+
Sbjct: 578 GDIKDAFRVRD-EMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNK--GISPDD 634
Query: 415 QTFHPLLKS 423
T+ L++
Sbjct: 635 STYLSLIEG 643
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 102/204 (50%), Gaps = 1/204 (0%)
Query: 158 EEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEG 217
E +SKG T T ++ S + ++A F+++ G+ + N ++D C G
Sbjct: 449 EMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANG 508
Query: 218 KVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYS 276
VE A + E+ + +PP+ TFN + G C+ +V+EA+ + EMK G P ISY+
Sbjct: 509 NVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYN 568
Query: 277 TIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIV 336
T+I Y R+ + + + DEM + G P ++TY ++ L K+ + + A + ++M
Sbjct: 569 TLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNK 628
Query: 337 GSKPDSRFFNCLIYTLGRASRVQE 360
G PD + LI +G + E
Sbjct: 629 GISPDDSTYLSLIEGMGNVDTLVE 652
>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 867
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 115/407 (28%), Positives = 186/407 (45%), Gaps = 42/407 (10%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLN-TIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +V L K R MD+ +L +M I T ++ +S G+W++A + F E+
Sbjct: 310 YNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMT 369
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS------------------------ 231
GL + T N L+D+LCK + + A +F + +
Sbjct: 370 REGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFV 429
Query: 232 ------------CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
I ++H FNI I+ K +DEA EM+G G P V++Y+T+I
Sbjct: 430 DMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVI 489
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG-S 338
+ CR + E L +M + G PN V Y +++ GD +A + +M G
Sbjct: 490 AALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIP 549
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
+P+ FF+ +I++L RV A V+ + + G PD TFN++I + G +KAF
Sbjct: 550 RPNITFFSSIIHSLCNEGRVMNAQDVFNLVI-HIGDRPDIFTFNSLIDGYCLVGKMDKAF 608
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
VL+ M +P+V T+ L+ FK+G+ D+ L L +M+ K + TY+LV+
Sbjct: 609 GVLDAMVS-AGTEPDVVTYSTLINGYFKSGRIDDGL-ILFREMLCK-RVKPTTVTYSLVL 665
Query: 459 HGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
GL RA + A +F EMI T +IL + + + D A
Sbjct: 666 DGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEA 712
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 153/327 (46%), Gaps = 10/327 (3%)
Query: 191 FDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS---CIPPNAHTFNIFIHGW 247
F L GL + N L LC + + A S+ L S C+P +A ++N I
Sbjct: 188 FARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSMLLHRMSELGCVP-DAFSYNTVIKSL 246
Query: 248 CKINRVDEAQWTIQEM-KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C +R EA + M KG GC P V+SY+ +I + SK L +EM +G PN
Sbjct: 247 CGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPN 306
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
VVTY +++ L K+ ++A + +M +PD + +I+ R +EA +++
Sbjct: 307 VVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFK 366
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
EM G+ PD TFN+++ H ++A + + H KP++ ++ LL
Sbjct: 367 -EMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGH-KPDIISYSILLHGYAT 424
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
G+ + ++ L M + + + D + ++I+ + + A L+F EM G ++P
Sbjct: 425 EGRFVD-MNNLFHSMTD-NGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNV 482
Query: 487 QTCRLILDEV-KQKHMYDAAEKIEAVM 512
T ++ + + + DA EK+ ++
Sbjct: 483 VTYATVIAALCRMGRLADAMEKLSQMI 509
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 157/340 (46%), Gaps = 13/340 (3%)
Query: 145 GKVRQMDQMRALLEEMSKGHIVTLNTIA--KVMRRFSGAGQWEDAVRTFDELGTFGLEKN 202
G R + + LL M+KG + + ++ V+ G+ A F+E+ G+ N
Sbjct: 248 GGSRSQEALDMLLR-MTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPN 306
Query: 203 TETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQ 261
T N ++ LCK ++ A V ++ + I P+ T+ IHG+ + R EA +
Sbjct: 307 VVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFK 366
Query: 262 EMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSG 321
EM G P ++++++++ S C+ + E+ + +G P++++Y+ ++ A G
Sbjct: 367 EMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEG 426
Query: 322 DFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTF 381
F + + M G DS FN LI + + EA+ ++ EM GV+P+ T+
Sbjct: 427 RFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIF-TEMRGQGVSPNVVTY 485
Query: 382 NTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG---KTDECLSQLL 438
T+I G A L +M + KPN +H L++ G K E +S+++
Sbjct: 486 ATVIAALCRMGRLADAMEKLSQMISI-GLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMM 544
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
D + + +IT ++ +IH LC + A +F +I
Sbjct: 545 DQGIPRP----NITFFSSIIHSLCNEGRVMNAQDVFNLVI 580
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 90/404 (22%), Positives = 164/404 (40%), Gaps = 79/404 (19%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLN--TIAKVMRRFSGAGQWED 186
G S + ++++ K MD+ + EM +G V+ N T A V+ G+ D
Sbjct: 442 GIVADSHCFNILINAHAKRGMMDEALLIFTEM-RGQGVSPNVVTYATVIAALCRMGRLAD 500
Query: 187 AVRTFDELGTFGLEKNT--------------------ETMNLLLD--------------- 211
A+ ++ + GL+ NT E ++ ++D
Sbjct: 501 AMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSII 560
Query: 212 -TLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCH 269
+LC EG+V A+ VF L + P+ TFN I G+C + ++D+A + M G
Sbjct: 561 HSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTE 620
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGD------- 322
P V++YST+I Y + L EM + P VTY+ V+ L ++G
Sbjct: 621 PDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKM 680
Query: 323 ----------------------------FEEAIRITEKMKIVGSKPDSRFFNCLIYTLGR 354
+EAI + K+ + K + N +I+ L +
Sbjct: 681 FHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYK 740
Query: 355 ASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNV 414
R +EA ++ + +G+ P+ ST+ MI G E+A + M K C P+
Sbjct: 741 VKRREEAHDLF-ASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEK-TGCAPSS 798
Query: 415 QTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
+ + +++ + G+ + + V+ +SL+ +T +L+I
Sbjct: 799 RLLNDIIRMLLQKGEIVKAGYYM--SKVDGTIISLEASTTSLLI 840
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 126/267 (47%), Gaps = 3/267 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
+ ++D V +MD+ +L+ M S G + T + ++ + +G+ +D + F E+
Sbjct: 591 FNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREML 650
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
++ T T +L+LD L + G+ A+ +F E+ +S + T+ I + G C+ N D
Sbjct: 651 CKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTD 710
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA ++ + +T+I + + + ++L + A G PN TY ++
Sbjct: 711 EAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMI 770
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
L K G EEA + M+ G P SR N +I L + + +A Y Y ++ +
Sbjct: 771 INLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKAGY-YMSKVDGTII 829
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVL 401
+ + ST + +I++F+ G + + L
Sbjct: 830 SLEASTTSLLISLFASKGRYREQIKFL 856
>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 126/516 (24%), Positives = 224/516 (43%), Gaps = 92/516 (17%)
Query: 65 PDIDVIISKVHVGSSEDEVFQSLKQDHVCNAI--QPSHYLVNKLIHRFKDDWKSALGIFR 122
P + +++ ++ +E + LK+ V N + +P+ L AL F+
Sbjct: 16 PLVPFVLNTINPLQNEQKDLNLLKESEVLNKLKNEPNILL--------------ALHFFK 61
Query: 123 WAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGA 181
+ ++H+ Y M+ LG R +D ++ LL+ M +G + V+ + A
Sbjct: 62 SIANSNSFKHTPLTYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINAYRRA 121
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTF 240
G E A++TF +G FG + + + N +LD L E K ++ ++ +K I N +T+
Sbjct: 122 GLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTY 181
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQS------------------- 281
N+ + CK +RVD A+ + EM GC P +SY+T++ S
Sbjct: 182 NMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRIKS 241
Query: 282 -----------YCRQYNFSKVYELLDEMQAQG---------------------------- 302
+CR++ +V+EL +EM +G
Sbjct: 242 FVPVYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVL 301
Query: 303 -------CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
C PNV T+T++M G EA+ + +M GS+P++ +N LI+ L
Sbjct: 302 AKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSY 361
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQ 415
++ EAV V Q +M NGV P+ +T++T+I F+ G A + +M C PNV
Sbjct: 362 GKMVEAVSVSQ-KMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKM-ITNGCLPNVV 419
Query: 416 TFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFK 475
+ ++ + + L L+++M N + + T+ I GLC + K EWA +
Sbjct: 420 VYTCMVDVLCRNSMFNHAL-HLIENMANG-NCPPNTITFNTFIKGLCCSGKTEWAMKVLN 477
Query: 476 EMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAV 511
+M + P T +LD +++A EA+
Sbjct: 478 QMRQYGCAPNVTTYNEVLD-----GLFNAKRTREAL 508
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 176/354 (49%), Gaps = 5/354 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +++ L ++ ++ A+L +M +G ++T +M+ + G+ +A+ ++ +
Sbjct: 281 YSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMI 340
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
G E NT N L+ LC GK+ A SV ++ ++ + PN T++ I G+ K +
Sbjct: 341 QEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLV 400
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
A +M +GC P V+ Y+ ++ CR F+ L++ M CPPN +T+ T +
Sbjct: 401 GASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFI 460
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
L SG E A+++ +M+ G P+ +N ++ L A R +EA+ + E+ E +
Sbjct: 461 KGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVG-EIEEMEI 519
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
+ T+NT+++ F H G + A + ++ + KP+ T++ ++ + K G+ +
Sbjct: 520 KSNLVTYNTILSGFCHAGMFKGALQIAGKL-LVGGTKPDSITYNTVIYAYCKQGEVKTAI 578
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
QL+D + K D+ TYT ++ G+C + A + +MI I P T
Sbjct: 579 -QLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGICPNRAT 631
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 142/300 (47%), Gaps = 5/300 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
G E ++ Y ++ L +M + ++ ++M + G T + ++ F+ AG A
Sbjct: 343 GSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGA 402
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHG 246
++++ T G N ++D LC+ A + + + PPN TFN FI G
Sbjct: 403 SEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKG 462
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C + + A + +M+ +GC P V +Y+ ++ + +++ E++ N
Sbjct: 463 LCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSN 522
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
+VTY T++S +G F+ A++I K+ + G+KPDS +N +IY + V+ A+ +
Sbjct: 523 LVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVD 582
Query: 367 VEMPENGVAPDTSTFNTMI-TMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
+ PD T+ +++ + + G E H+ + +N E PN T++ L++ F
Sbjct: 583 RLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMIN--EGICPNRATWNALVRGLF 640
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 111/244 (45%), Gaps = 17/244 (6%)
Query: 273 ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEK 332
++Y+T+I+ + + + LL M+ +G N + V++ ++G E+A++ +
Sbjct: 74 LTYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQALKTFYR 133
Query: 333 MKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
+ G KP + +N ++ L ++ Q +Y M +G+ + T+N ++ +
Sbjct: 134 IGEFGCKPSVKIYNHVLDALLSENKFQMINGIYN-NMKRDGIELNVYTYNMLLKALCKND 192
Query: 393 HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
+ A +L EM+ + C P+ ++ ++ S + GK +E LS+ I
Sbjct: 193 RVDAARKLLAEMS-YKGCIPDAVSYTTVVSSMCRLGKVEEA-----------RELSMRIK 240
Query: 453 T----YTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+ Y +I+G CR +K E + LF EM I P T +++ + + + A +
Sbjct: 241 SFVPVYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAV 300
Query: 509 EAVM 512
A M
Sbjct: 301 LAKM 304
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 89/196 (45%), Gaps = 8/196 (4%)
Query: 111 KDDWK-SALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTL 168
K +W L R G P +E+ + + + + R+ Q+ +EEM K ++VT
Sbjct: 468 KTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNA-KRTREALQIVGEIEEMEIKSNLVTY 526
Query: 169 NTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF-- 226
NTI + F AG ++ A++ +L G + ++ T N ++ CK+G+V+ A +
Sbjct: 527 NTI---LSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDR 583
Query: 227 LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQY 286
L K P+ T+ + G C VDEA + +M G P +++ +++ +
Sbjct: 584 LTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNALVRGLFSKL 643
Query: 287 NFSKVYELLDEMQAQG 302
++D + A G
Sbjct: 644 GHLGPIHIVDNILANG 659
>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
Length = 668
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 166/333 (49%), Gaps = 6/333 (1%)
Query: 173 KVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC 232
K++R G+ DA R G + N L+ C+ G ++ AR + +
Sbjct: 80 KLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMP-- 137
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
+ P+A+T+ I C RV +A + +M GC P V++Y+ ++++ C+ F +
Sbjct: 138 VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAM 197
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
+LDEM+A+GC PN+VTY +++ + + G ++A + ++ G +PD+ + L+ L
Sbjct: 198 AVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGL 257
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
+ R + ++ EM E P+ TF+ +I F G E+A VL++M + E C
Sbjct: 258 CASKRWDDVEELF-AEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHE-CAT 315
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
N + ++ S K G+ D+ + L++M + + D +YT V+ GLCRA + A
Sbjct: 316 NTTLCNIVINSICKQGRVDDAF-KFLNNM-GSYGCNPDTISYTTVLKGLCRAERWNDAKE 373
Query: 473 LFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
L KEM+ ++ P T + + QK + + A
Sbjct: 374 LLKEMVRNNCPPNEVTFNTFICILCQKGLIEQA 406
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 130/515 (25%), Positives = 219/515 (42%), Gaps = 54/515 (10%)
Query: 41 IESYCSDGARLDHHQVLCVDSPRLPDIDVIISKVHVGSSEDEVFQ--SLKQDHVCNAIQP 98
+ YC G LD + L P PD + V V SL D + QP
Sbjct: 117 VAGYCRYG-HLDAARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQP 175
Query: 99 SHYLVNKLIHRF--KDDWKSALGIF---RWAGSCPGYEHSSEIYEMMVDILGKVRQMDQM 153
+ L+ ++ A+ + R G P Y ++++ + + ++D
Sbjct: 176 NVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIV----TYNVIINGMCREGRVDDA 231
Query: 154 RALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDT 212
R LL + S G + +++ + +W+D F E+ N T ++L+
Sbjct: 232 RDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRF 291
Query: 213 LCKEGKVELARSVFLELKS--CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHP 270
C+ G VE A V ++ C N NI I+ CK RVD+A + M +GC+P
Sbjct: 292 FCRGGMVERAIQVLQQMTEHEC-ATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNP 350
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRIT 330
ISY+T+++ CR ++ ELL EM CPPN VT+ T + L + G E+AI +
Sbjct: 351 DTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLI 410
Query: 331 EKMK----IVG----------------------------SKPDSRFFNCLIYTLGRASRV 358
E+M+ VG KP++ + L+ L A R+
Sbjct: 411 EQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKPNTITYTTLLTGLCNAERL 470
Query: 359 QEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH-CKPNVQTF 417
A + EM P+ TFN ++ F G ++A ++E+M +EH C PN+ T+
Sbjct: 471 DAAAELV-AEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQM--MEHGCTPNLITY 527
Query: 418 HPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
+ L K +++ L +LL +V+K +S D+ T++ +I L + ++ E A +F
Sbjct: 528 NTLFDGITKDCSSEDAL-ELLHGLVSK-GVSPDVITFSSIIGILSKEDRVEEAIQMFHLA 585
Query: 478 IGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
+ P+ IL + ++H D A A M
Sbjct: 586 QDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYM 620
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 139/302 (46%), Gaps = 15/302 (4%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++ L + + + + LL+EM + + VT NT ++ + G E A+ +
Sbjct: 355 YTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQ---KGLIEQAIMLIE 411
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIP--PNAHTFNIFIHGWCKI 250
++ G T N L++ C +G ++ A LEL +P PN T+ + G C
Sbjct: 412 QMQEHGCTVGVVTYNALVNGFCVQGHIDSA----LELFRSMPCKPNTITYTTLLTGLCNA 467
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
R+D A + EM C P V++++ ++ +C++ + EL+++M GC PN++TY
Sbjct: 468 ERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITY 527
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
T+ + K E+A+ + + G PD F+ +I L + RV+EA+ ++ +
Sbjct: 528 NTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQ- 586
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKT 430
+ G+ P +N ++ + A L M C PN T+ L++ + G
Sbjct: 587 DIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVS-NGCMPNESTYIILIEGLAREGLL 645
Query: 431 DE 432
E
Sbjct: 646 KE 647
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 138/336 (41%), Gaps = 50/336 (14%)
Query: 68 DVIISKVHVGSSEDEVFQSLKQ--DHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFR--W 123
+++I+ + D+ F+ L + CN S+ V K + R + W A + +
Sbjct: 321 NIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCR-AERWNDAKELLKEMV 379
Query: 124 AGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAG 182
+CP E + + + IL + ++Q L+E+M + G V + T ++ F G
Sbjct: 380 RNNCPPNEVT---FNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQG 436
Query: 183 QWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTF 240
+ A+ F + + NT T LL LC +++ A + E+ + C PPN TF
Sbjct: 437 HIDSALELFRSMPC---KPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDC-PPNVVTF 492
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHP---------------C-------------- 271
N+ ++ +C+ +DEA +++M HGC P C
Sbjct: 493 NVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVS 552
Query: 272 ------VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEE 325
VI++S+II ++ + ++ Q G P + Y ++ L K + +
Sbjct: 553 KGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDN 612
Query: 326 AIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
AI M G P+ + LI L R ++EA
Sbjct: 613 AIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEA 648
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 98/211 (46%), Gaps = 7/211 (3%)
Query: 302 GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
G P+V T ++ L + G +A R+ + GS D +N L+ R + A
Sbjct: 70 GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAA 129
Query: 362 VYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLL 421
+ MP VAPD T+ +I + G A +L++M + C+PNV T+ LL
Sbjct: 130 RRLIG-SMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLR-RGCQPNVVTYTVLL 184
Query: 422 KSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHD 481
++ K ++ ++ +LD+M K + +I TY ++I+G+CR + + A L + +
Sbjct: 185 EAMCKNSGFEQAMA-VLDEMRAKG-CTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYG 242
Query: 482 ITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
P + +L + +D E++ A M
Sbjct: 243 CQPDTVSYTTLLKGLCASKRWDDVEELFAEM 273
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 82/174 (47%), Gaps = 14/174 (8%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK----GHIVTLNTIAKVMRRFSGAGQ---WEDAVR 189
+ ++V+ + +D+ L+E+M + +++T NT+ F G + EDA+
Sbjct: 492 FNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTL------FDGITKDCSSEDALE 545
Query: 190 TFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWC 248
L + G+ + T + ++ L KE +VE A +F L + P A +N + G C
Sbjct: 546 LLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLC 605
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
K + +D A + M +GC P +Y +I+ R+ + +LL + ++G
Sbjct: 606 KRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQDLLSMLCSRG 659
>gi|51971677|dbj|BAD44503.1| hypothetical protein [Arabidopsis thaliana]
Length = 447
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 185/369 (50%), Gaps = 6/369 (1%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSC-PGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM 160
LVN ++ R + AL F + + Y H + +++ +DI ++ + +L+ M
Sbjct: 52 LVNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRM 111
Query: 161 SKGHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV 219
I + T A V R++ AG+ + AV+ F + G ++ + N +LD LCK +V
Sbjct: 112 RSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRV 171
Query: 220 ELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
E A +F L+ + T+N+ ++GWC I R + ++EM G +P + +Y+T++
Sbjct: 172 EKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKTLEVLKEMVERGINPNLTTYNTML 231
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
+ + R +E EM+ + C +VVTYTTV+ +G+ + A + ++M G
Sbjct: 232 KGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVL 291
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
P +N +I L + V+ AV +++ EM G P+ +T+N +I H G +
Sbjct: 292 PSVATYNAMIQVLCKKDNVENAVVMFE-EMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEE 350
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIH 459
+++ M E C+PN QT++ +++ + + ++ L L + M + L ++ TY ++I
Sbjct: 351 LMQRMEN-EGCEPNFQTYNMMIRYYSECSEVEKALG-LFEKMGSGDCLP-NLDTYNILIS 407
Query: 460 GLCRANKCE 468
G+ + E
Sbjct: 408 GMFVRKRSE 416
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 102/216 (47%), Gaps = 1/216 (0%)
Query: 148 RQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN 207
R + L E + +G L T +++ F AGQ A F E+ E + T
Sbjct: 204 RTPKTLEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYT 263
Query: 208 LLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
++ G+++ AR+VF E+ + + P+ T+N I CK + V+ A +EM
Sbjct: 264 TVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRR 323
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
G P V +Y+ +I+ FS+ EL+ M+ +GC PN TY ++ Y ++ + E+A
Sbjct: 324 GYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKA 383
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
+ + EKM P+ +N LI + R ++ V
Sbjct: 384 LGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMV 419
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 113/242 (46%), Gaps = 6/242 (2%)
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
S+ I R + V+ L+ M++ P+ T+ V A +G ++A+++ M
Sbjct: 87 SFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNM 146
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
G D FN ++ L ++ RV++A +++ V DT T+N ++ +
Sbjct: 147 HEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSV--DTVTYNVILNGWCLIKR 204
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
K VL+EM + PN+ T++ +LK F+ G+ L+ + K +D+ T
Sbjct: 205 TPKTLEVLKEMVE-RGINPNLTTYNTMLKGFFRAGQIRHAWEFFLE--MKKRDCEIDVVT 261
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEAVM 512
YT V+HG A + + A +F EMI + P T ++ + K+ ++ +A E ++
Sbjct: 262 YTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMV 321
Query: 513 KK 514
++
Sbjct: 322 RR 323
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 120/261 (45%), Gaps = 13/261 (4%)
Query: 258 WT-IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSY 316
W+ I M+ P +++ + + Y K +L M GC ++ ++ T++
Sbjct: 105 WSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDV 164
Query: 317 LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
L KS E+A + ++ S D+ +N ++ R + + V + EM E G+ P
Sbjct: 165 LCKSKRVEKAYELFRALRGRFS-VDTVTYNVILNGWCLIKRTPKTLEVLK-EMVERGINP 222
Query: 377 DTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQ 436
+ +T+NTM+ F G A+ EM K + C+ +V T+ ++ G+
Sbjct: 223 NLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRD-CEIDVVTYTTVVHGFGVAGEIKRA-RN 280
Query: 437 LLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV 496
+ D+M+ + L + TY +I LC+ + E A ++F+EM+ P T +++
Sbjct: 281 VFDEMIREGVLP-SVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLI--- 336
Query: 497 KQKHMYDAAE--KIEAVMKKL 515
+ ++ A E + E +M+++
Sbjct: 337 --RGLFHAGEFSRGEELMQRM 355
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 195/404 (48%), Gaps = 12/404 (2%)
Query: 117 ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKG-HIVTLNTIAKVM 175
A F+W + G S +V++LG R+ ++ +L E+ K +I+ ++
Sbjct: 2 AYKFFKWVRTQRGGVPSVRACTTLVEMLGIARRFNEAEEVLAEVEKSRYILQPRIFIELA 61
Query: 176 RRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIP 234
R ++ AG E +V + N L+D K G + A +V+ + +S +
Sbjct: 62 RGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLR 121
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYEL 294
P+ +TFN+ ++ + K RVD +EM+ C P VI+YS +I + C+ K ++
Sbjct: 122 PDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKV 181
Query: 295 LDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGR 354
+M+++GC PN+ TYT+++ L KSG ++A + E+M G +N LI+ LGR
Sbjct: 182 FLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGR 241
Query: 355 ASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNV 414
+ R A +++ EM G+ PD TF +++ G +A + +E + C +V
Sbjct: 242 SGRADAAAKLFR-EMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDV-GCALDV 299
Query: 415 QTFHPLLKSCFKTGKTDEC---LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAY 471
++ L+ + K+ + DE +L +D L D+ T+ ++ GLC++ + A+
Sbjct: 300 NLYNVLIDTLCKSKRLDEAWEIFGELEED-----GLVPDVYTFNALMDGLCKSGRIHDAF 354
Query: 472 LLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
+L +M TP ++D +++ + A ++ M+ L
Sbjct: 355 ILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSL 398
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/417 (26%), Positives = 188/417 (45%), Gaps = 46/417 (11%)
Query: 133 SSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQWEDAV 188
++ Y ++D K + A+ M + + T N + M F A + +
Sbjct: 88 TASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVL---MNAFKKAKRVDSVW 144
Query: 189 RTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGW 247
+ F+E+ N T ++L+D +CK G VE A VFL++KS PN T+ I G
Sbjct: 145 KLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGL 204
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
K VD+A + +EM G + Y+++I R +L EM ++G P+
Sbjct: 205 GKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDH 264
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
VT+T+++ L +G EA RI ++ + VG D +N LI TL ++ R+ EA ++
Sbjct: 265 VTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFG- 323
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKT 427
E+ E+G+ PD TFN ++ G AF +L +M K C P+V ++ L+ K+
Sbjct: 324 ELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDM-KRAGCTPDVTVYNTLIDGLRKS 382
Query: 428 GKTDECLSQLLD--------DMVNKHHL------------------------SLDITTYT 455
G+ +E LL+ D+V + L + TY
Sbjct: 383 GRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGFANTVTYN 442
Query: 456 LVIHGLCRANKCEWAYLLF----KEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+++GLC A + + AY LF +E + I P + T +L+ +Q + + A +
Sbjct: 443 TILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNGARQAGLSELANSL 499
>gi|297842914|ref|XP_002889338.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335180|gb|EFH65597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 712
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 192/427 (44%), Gaps = 53/427 (12%)
Query: 117 ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALL---EEMSKGHIVTLNT-IA 172
L F W + G+ H + + +M++ LG+ R ++ R L E+ S G + +
Sbjct: 87 GLRFFDWVYN-KGFSHKEQSFFLMLEFLGRARNLNAARNFLFSIEKRSNGCVKLQDRYFN 145
Query: 173 KVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC 232
++R + AG ++++V F + G+ + T N LL L K G+ +A +F E++
Sbjct: 146 SLIRSYGNAGLFQESVNLFQTMKKMGISPSVLTFNSLLSILLKRGRTGMAHDMFDEMRRT 205
Query: 233 --IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSK 290
+ P+++TFN I G+CK + VD+A +EM+ + C+P V++Y+TII CR
Sbjct: 206 YGVTPDSYTFNTLISGFCKNSMVDQAFTIFKEMELYSCNPDVVTYNTIIDGLCRAGKVKI 265
Query: 291 VYELLDEM--QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
+ LL+ M +A PN+V+YTT++ + +EA+ + +M G KP++ +N L
Sbjct: 266 AHNLLNGMLKKATAVHPNIVSYTTLLRGYCMKQEIDEALLVFHEMLTRGLKPNAVTYNTL 325
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM---- 404
I L A R E +PD TFN +I GH + A V +EM
Sbjct: 326 IKGLSEAHRYDEIKGFLIGGDAFTTFSPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMK 385
Query: 405 ----------------------------NKL---------EHCKPNVQTFHPLLKSCFKT 427
N+L CKP ++ + +
Sbjct: 386 LHPDSASYSVLIRTLCLRNEFDKAETLFNELFEKEVLLGKNECKPLAAAYNLMFEYLCAN 445
Query: 428 GKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
GK + ++ ++ + + D ++Y +I GLCR K + AY L M+ + P +
Sbjct: 446 GKAKQA-EKVFRQLMKRG--AQDPSSYRTLITGLCREGKFKAAYELLVLMLRREFVPDPE 502
Query: 488 TCRLILD 494
T +++D
Sbjct: 503 TYEVLID 509
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 149/330 (45%), Gaps = 10/330 (3%)
Query: 186 DAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK----SCIPPNAHTFN 241
D +R FD + G ++ L+L+ L + + AR+ ++ C+ FN
Sbjct: 86 DGLRFFDWVYNKGFSHKEQSFFLMLEFLGRARNLNAARNFLFSIEKRSNGCVKLQDRYFN 145
Query: 242 IFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ-A 300
I + E+ Q MK G P V+++++++ ++ +++ DEM+
Sbjct: 146 SLIRSYGNAGLFQESVNLFQTMKKMGISPSVLTFNSLLSILLKRGRTGMAHDMFDEMRRT 205
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
G P+ T+ T++S K+ ++A I ++M++ PD +N +I L RA +V+
Sbjct: 206 YGVTPDSYTFNTLISGFCKNSMVDQAFTIFKEMELYSCNPDVVTYNTIIDGLCRAGKVKI 265
Query: 361 AVYVYQVEMPE-NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
A + + + V P+ ++ T++ + ++A V EM KPN T++
Sbjct: 266 AHNLLNGMLKKATAVHPNIVSYTTLLRGYCMKQEIDEALLVFHEM-LTRGLKPNAVTYNT 324
Query: 420 LLKSCFKTGKTDECLSQLLD-DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
L+K + + DE L+ D S D T+ ++I C A + A +F+EM+
Sbjct: 325 LIKGLSEAHRYDEIKGFLIGGDAFTT--FSPDACTFNILIKAHCDAGHLDAAMKVFQEML 382
Query: 479 GHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+ P + +++ + ++ +D AE +
Sbjct: 383 NMKLHPDSASYSVLIRTLCLRNEFDKAETL 412
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 78/374 (20%), Positives = 152/374 (40%), Gaps = 46/374 (12%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLN----TIAKVMRRFSGAGQW 184
G + ++ Y ++ L + + D+++ L + T + T +++ AG
Sbjct: 314 GLKPNAVTYNTLIKGLSEAHRYDEIKGFL--IGGDAFTTFSPDACTFNILIKAHCDAGHL 371
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--------KSCIPPN 236
+ A++ F E+ L ++ + ++L+ TLC + + A ++F EL K+ P
Sbjct: 372 DAAMKVFQEMLNMKLHPDSASYSVLIRTLCLRNEFDKAETLFNELFEKEVLLGKNECKPL 431
Query: 237 AHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCH-PCVISYSTIIQSYCRQYNFSKVYELL 295
A +N+ C + +A+ +++ G P SY T+I CR+ F YELL
Sbjct: 432 AAAYNLMFEYLCANGKAKQAEKVFRQLMKRGAQDPS--SYRTLITGLCREGKFKAAYELL 489
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
M + P+ TY ++ L K G+ A ++M P + F+ ++ L +
Sbjct: 490 VLMLRREFVPDPETYEVLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELVKR 549
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQ 415
++ + V M E + + + + EKAF ++
Sbjct: 550 KFANDSFGLLTV-MLEKRIRQNIDLSTQAVRLVFSSAQKEKAFLIVR------------- 595
Query: 416 TFHPLLKSCFKTGKTDECLSQLLDD--MVNKHHLSL---------DITTYTLVIHGLCRA 464
LL K +E L L ++ +++ H L L DI T +I GLC+
Sbjct: 596 ----LLYDNGYLIKMEELLDFLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTIIEGLCKH 651
Query: 465 NKCEWAYLLFKEMI 478
+ A+ L+ E++
Sbjct: 652 KRHSEAFSLYNELV 665
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 92/239 (38%), Gaps = 30/239 (12%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTF 240
G+ + A + F +L G ++ + L+ LC+EGK + A + L L+ P+ T+
Sbjct: 446 GKAKQAEKVFRQLMKRG-AQDPSSYRTLITGLCREGKFKAAYELLVLMLRREFVPDPETY 504
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
+ I G KI A T+Q M P ++ +++ ++ + + LL M
Sbjct: 505 EVLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELVKRKFANDSFGLLTVMLE 564
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
+ N+ T + + S E+A I L+Y G +++E
Sbjct: 565 KRIRQNIDLSTQAVRLVFSSAQKEKAFLIVR----------------LLYDNGYLIKMEE 608
Query: 361 AV------------YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKL 407
+ + + E D T NT+I H H +AF + E+ +L
Sbjct: 609 LLDFLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTIIEGLCKHKRHSEAFSLYNELVEL 667
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 208/407 (51%), Gaps = 17/407 (4%)
Query: 107 IHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDIL---GKVRQMDQMRALLEEMS-K 162
++R + W +FR S Y + +MV++L GK+++ + +E + K
Sbjct: 205 LNRMEMAWVLYAEMFRLRISSTVY-----TFNIMVNVLCKEGKLKKAREFIGFMEGLGFK 259
Query: 163 GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELA 222
++V+ NTI + +S G E A R D + G+E ++ T L+ +CKEG++E A
Sbjct: 260 PNVVSYNTI---IHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEA 316
Query: 223 RSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQS 281
+F ++ + + PNA T+N I G+C ++ A EM G P V +Y+ ++ +
Sbjct: 317 SGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHA 376
Query: 282 YCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPD 341
+ + +++ EM+ +G P+ +TY +++ ++ G+ ++A + +M G +P
Sbjct: 377 LFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPT 436
Query: 342 SRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVL 401
+ LIY L R +R++EA +++ ++ + GV+PD FN M+ +G+ E+AF +L
Sbjct: 437 HVTYTSLIYVLSRRNRMKEADDLFE-KILDQGVSPDVIMFNAMVDGHCANGNVERAFMLL 495
Query: 402 EEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGL 461
+EM++ + P+ TF+ L++ + GK +E LLD+M + + D +Y +I G
Sbjct: 496 KEMDR-KSVPPDEVTFNTLMQGRCREGKVEEA-RMLLDEM-KRRGIKPDHISYNTLISGY 552
Query: 462 CRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
R + A+ + EM+ P T ++ + + D AE++
Sbjct: 553 GRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEEL 599
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 180/389 (46%), Gaps = 30/389 (7%)
Query: 133 SSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTF 191
SS +++++V + ++R+ D+ M KG + + T ++ F + E A +
Sbjct: 156 SSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLY 215
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSV--FLELKSCIPPNAHTFNIFIHGWCK 249
E+ + T N++++ LCKEGK++ AR F+E PN ++N IHG+
Sbjct: 216 AEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFME-GLGFKPNVVSYNTIIHGYSS 274
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
++ A+ + M+ G P +Y ++I C++ + L D+M G PN VT
Sbjct: 275 RGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVT 334
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM 369
Y T++ GD E A ++M G P +N L++ L R+ EA + + EM
Sbjct: 335 YNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIK-EM 393
Query: 370 PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
+ G+ PD T+N +I +S G+ +KAF + EM + +P T+ L+ + +
Sbjct: 394 RKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLS-KGIEPTHVTYTSLIYVLSRRNR 452
Query: 430 ---TDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP-- 484
D+ ++LD V S D+ + ++ G C E A++L KEM + P
Sbjct: 453 MKEADDLFEKILDQGV-----SPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDE 507
Query: 485 --------------RYQTCRLILDEVKQK 499
+ + R++LDE+K++
Sbjct: 508 VTFNTLMQGRCREGKVEEARMLLDEMKRR 536
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 148/327 (45%), Gaps = 51/327 (15%)
Query: 227 LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHP---------------- 270
L +KS I F++ + C++ R DEA MK G P
Sbjct: 152 LSVKSSI-----VFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLN 206
Query: 271 -------------------CVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
V +++ ++ C++ K E + M+ G PNVV+Y
Sbjct: 207 RMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYN 266
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
T++ + G+ E A RI + M++ G +PDS + LI + + R++EA ++ +M E
Sbjct: 267 TIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFD-KMVE 325
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
G+ P+ T+NT+I + + G E+AF +EM K + P+V T++ L+ + F G+
Sbjct: 326 IGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVK-KGIMPSVSTYNLLVHALFMEGRMG 384
Query: 432 ECLSQLLDDMVN---KHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
E DDM+ K + D TY ++I+G R + A+ L EM+ I P + T
Sbjct: 385 EA-----DDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVT 439
Query: 489 -CRLILDEVKQKHMYDAAEKIEAVMKK 514
LI ++ M +A + E ++ +
Sbjct: 440 YTSLIYVLSRRNRMKEADDLFEKILDQ 466
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 160/369 (43%), Gaps = 44/369 (11%)
Query: 95 AIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQ 152
+P+ N +IH + + + + A I A G E S Y ++ + K ++++
Sbjct: 257 GFKPNVVSYNTIIHGYSSRGNIEGARRILD-AMRVKGIEPDSYTYGSLISGMCKEGRLEE 315
Query: 153 MRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLD 211
L ++M + G + T ++ + G E A DE+ G+ + T NLL+
Sbjct: 316 ASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVH 375
Query: 212 TLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKI-------------------- 250
L EG++ A + E+ K I P+A T+NI I+G+ +
Sbjct: 376 ALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEP 435
Query: 251 ---------------NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
NR+ EA +++ G P VI ++ ++ +C N + + LL
Sbjct: 436 THVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLL 495
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
EM + PP+ VT+ T+M + G EEA + ++MK G KPD +N LI GR
Sbjct: 496 KEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRR 555
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM-NKLEHCKPNV 414
+++A V EM G P T+N +I + + A +L+EM NK P+
Sbjct: 556 GDIKDAFRVRD-EMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNK--GISPDD 612
Query: 415 QTFHPLLKS 423
T+ L++
Sbjct: 613 STYLSLIEG 621
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 102/204 (50%), Gaps = 1/204 (0%)
Query: 158 EEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEG 217
E +SKG T T ++ S + ++A F+++ G+ + N ++D C G
Sbjct: 427 EMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANG 486
Query: 218 KVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYS 276
VE A + E+ + +PP+ TFN + G C+ +V+EA+ + EMK G P ISY+
Sbjct: 487 NVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYN 546
Query: 277 TIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIV 336
T+I Y R+ + + + DEM + G P ++TY ++ L K+ + + A + ++M
Sbjct: 547 TLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNK 606
Query: 337 GSKPDSRFFNCLIYTLGRASRVQE 360
G PD + LI +G + E
Sbjct: 607 GISPDDSTYLSLIEGMGNVDTLVE 630
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 188/394 (47%), Gaps = 8/394 (2%)
Query: 95 AIQPSHYLVNKLIHRFKDDWKSAL-GIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQM 153
++P + N++++ D L I S G + + +++ L + Q+
Sbjct: 149 GLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPA 208
Query: 154 RALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDT 212
+LE+M S G + T +M+ + G + A+R +++ FG + ++N+++
Sbjct: 209 ILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHG 268
Query: 213 LCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHP 270
CKEG+VE A + E+ + P+ +TFN ++G CK V A + M G P
Sbjct: 269 FCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDP 328
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRIT 330
V +Y+++I C+ + E LD+M + C PN VTY T++S L K EEA +
Sbjct: 329 DVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELA 388
Query: 331 EKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSH 390
+ G PD FN LI L + A+ +++ EM G PD T+N +I
Sbjct: 389 RVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFE-EMRSKGCEPDEFTYNMLIDSLCS 447
Query: 391 HGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLD 450
G ++A ++L++M +L C +V T++ L+ K K E ++ D+M H +S +
Sbjct: 448 KGKLDEALNMLKQM-ELSGCARSVITYNTLIDGFCKANKIREA-EEIFDEM-EVHGVSRN 504
Query: 451 ITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
TY +I GLC++ + E A L +MI P
Sbjct: 505 SVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKP 538
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 113/460 (24%), Positives = 210/460 (45%), Gaps = 50/460 (10%)
Query: 99 SHYLVNKLIHRFKDDWK--SALGIFRWAGSCPGYEHSSEIYEMMVDIL---GKVR-QMDQ 152
S+ VN ++H F + + AL + + G+ + +V+ L G V+ ++
Sbjct: 258 SNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEI 317
Query: 153 MRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDT 212
M +L+E + T N++ + + G+ ++AV D++ T NT T N L+ T
Sbjct: 318 MDVMLQEGYDPDVYTYNSVISGLCKL---GEVKEAVEFLDQMITRDCSPNTVTYNTLIST 374
Query: 213 LCKEGKVE-----------------------------------LARSVFLELKS-CIPPN 236
LCKE +VE +A +F E++S P+
Sbjct: 375 LCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPD 434
Query: 237 AHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLD 296
T+N+ I C ++DEA +++M+ GC VI+Y+T+I +C+ + E+ D
Sbjct: 435 EFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFD 494
Query: 297 EMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRAS 356
EM+ G N VTY T++ L KS E+A ++ ++M + G KPD +N L+ R
Sbjct: 495 EMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGG 554
Query: 357 RVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQT 416
+++A + Q M NG PD T+ T+I+ G E A +L + +++
Sbjct: 555 DIKKAADIVQA-MTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSI-QMKGIALTPHA 612
Query: 417 FHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCR-ANKCEWAYLLFK 475
++P+++ F+ KT E ++ L +M+ ++ + D +Y +V GLC A
Sbjct: 613 YNPVIQGLFRKRKTTEAIN-LFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDFLV 671
Query: 476 EMIGHDITPRYQTCRLILDEVKQKHMYDAAEK-IEAVMKK 514
E++ P + + ++ + + M + K + VM+K
Sbjct: 672 ELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQK 711
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 118/482 (24%), Positives = 216/482 (44%), Gaps = 85/482 (17%)
Query: 109 RFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKG----- 163
R + D +AL +F A P + +YE ++ LG+ D MR +LE+M
Sbjct: 58 RSQADDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEMG 117
Query: 164 ---HIVTLNTIAK--VMRRFSGAGQW--EDAVRTFD------------------------ 192
++ + + A+ + G W +D D
Sbjct: 118 TSPFLILIESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAH 177
Query: 193 -ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTF---------- 240
++ +G++ + T N+L+ LC+ ++ A + ++ S + P+ TF
Sbjct: 178 AKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEE 237
Query: 241 -------------------------NIFIHGWCKINRVDEAQWTIQEMKGH-GCHPCVIS 274
N+ +HG+CK RV++A IQEM G P +
Sbjct: 238 GDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYT 297
Query: 275 YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
++T++ C+ + E++D M +G P+V TY +V+S L K G+ +EA+ ++M
Sbjct: 298 FNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMI 357
Query: 335 IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHH 394
P++ +N LI TL + ++V+EA + +V + G+ PD TFN++I +H
Sbjct: 358 TRDCSPNTVTYNTLISTLCKENQVEEATELARV-LTSKGILPDVCTFNSLIQGLCLTRNH 416
Query: 395 EKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS---LDI 451
A + EEM + + C+P+ T++ L+ S GK DE L +M+ + LS +
Sbjct: 417 RVAMELFEEM-RSKGCEPDEFTYNMLIDSLCSKGKLDEAL-----NMLKQMELSGCARSV 470
Query: 452 TTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEA 510
TY +I G C+ANK A +F EM H ++ T ++D + K + + DA++ ++
Sbjct: 471 ITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQ 530
Query: 511 VM 512
++
Sbjct: 531 MI 532
>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
Length = 757
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 191/374 (51%), Gaps = 6/374 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++D L K + +D+ + + + M KG +T ++ + G+W++ V+ E+
Sbjct: 205 YTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMS 264
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVD 254
T GL+ + +LLD LCK G+ AR++F ++ I PN + I +HG+ +
Sbjct: 265 THGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLS 324
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
E + M G+G P ++ + +Y ++ + + D+M+ Q PN+VTY ++
Sbjct: 325 EMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALI 384
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
L K G ++A+ +M G PD F+ L+Y L + ++A ++ E+ + G+
Sbjct: 385 DALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELF-FEVLDQGI 443
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
DT FNT++ G +A +++ M ++ +P+V +++ L+ TG+ DE
Sbjct: 444 RLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRV-GVRPDVISYNTLVDGHCLTGRIDEA- 501
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
++LLD +V+ L D TY ++HG C+A + + AY LF+EM+ +TP T IL
Sbjct: 502 AKLLDVIVSIG-LKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILH 560
Query: 495 EVKQKHMYDAAEKI 508
+ Q + A+++
Sbjct: 561 GLFQTGRFSEAKEL 574
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 185/398 (46%), Gaps = 9/398 (2%)
Query: 89 QDHVCNAIQPSHYLVNKLIHRFKD--DWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGK 146
Q + ++P+++ LIH + WK + + + S G + IY +++D L K
Sbjct: 226 QHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEM-STHGLQPDCYIYAVLLDYLCK 284
Query: 147 VRQMDQMRALLEE-MSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTET 205
+ + R + + + KG + ++ ++ G + D + G+ +
Sbjct: 285 NGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHI 344
Query: 206 MNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
N++ K+ ++ A +F +++ + PN T+ I CK+ RVD+A +M
Sbjct: 345 FNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMI 404
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
G P + +S+++ C + K EL E+ QG + V + T+M L + G
Sbjct: 405 DEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVM 464
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTM 384
EA R+ + M VG +PD +N L+ R+ EA + V + G+ PD T+NT+
Sbjct: 465 EAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDV-IVSIGLKPDKVTYNTL 523
Query: 385 ITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK 444
+ + + A+ + EM ++ P+V T++ +L F+TG+ E +L M+N
Sbjct: 524 LHGYCKARRIDDAYSLFREM-LMKGLTPDVVTYNTILHGLFQTGRFSEA-KELYLSMINS 581
Query: 445 HHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
++I TY ++I+GLC+ N + A+ +F + D+
Sbjct: 582 RT-QMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDL 618
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 141/297 (47%), Gaps = 22/297 (7%)
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIP--------PNAHTFNIFIHGWC 248
FG + + ++LL C E + E A LEL S + PN T+ I G C
Sbjct: 158 FGCTPDVFSYSILLKGFCNEKRAEEA----LELLSMMADDGDGSHTPNVVTYTTVIDGLC 213
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
K VD A+ Q M G P +Y+ +I Y + +V ++L EM G P+
Sbjct: 214 KAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCY 273
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
Y ++ YL K+G EA I + + G KP+ + L++ + E ++ +
Sbjct: 274 IYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSE-MHSFLDL 332
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M NGV+PD FN M ++ ++A H+ ++M + + PN+ T+ L+ + K G
Sbjct: 333 MVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQ-QRLSPNIVTYGALIDALCKLG 391
Query: 429 KTDECL---SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
+ D+ + +Q++D+ ++ DI ++ +++GLC +K E A LF E++ I
Sbjct: 392 RVDDAVLKFNQMIDE-----GMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGI 443
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 160/357 (44%), Gaps = 14/357 (3%)
Query: 92 VCNAIQPSHYLVNKLIHRF--KDDWKSALGIF---RWAGSCPGYEHSSEIYEMMVDILGK 146
V N + P H++ N + + K A+ IF R P + Y ++D L K
Sbjct: 334 VGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSP----NIVTYGALIDALCK 389
Query: 147 VRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTET 205
+ ++D +M +G + + ++ +WE A F E+ G+ +T
Sbjct: 390 LGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVF 449
Query: 206 MNLLLDTLCKEGKV-ELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
N L+ LC+EG+V E R + L L+ + P+ ++N + G C R+DEA + +
Sbjct: 450 FNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIV 509
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
G P ++Y+T++ YC+ Y L EM +G P+VVTY T++ L ++G F
Sbjct: 510 SIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFS 569
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTM 384
EA + M ++ + +N +I L + + V EA ++ + + D T N M
Sbjct: 570 EAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFH-SLCSKDLQLDIFTANIM 628
Query: 385 ITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDM 441
I G E A + ++ P+V+T+ + ++ K G +E L +L M
Sbjct: 629 IGALLKGGRKEDAMDLFATISAY-GLVPDVETYCLIAENLIKEGSLEE-LDELFSAM 683
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 134/316 (42%), Gaps = 45/316 (14%)
Query: 205 TMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHT-FNIFIHGWCKINRVDEA-QWTIQ 261
T +L+ C+ G+++ + F L LK+ N F+ + G C RVDEA ++
Sbjct: 94 TYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATDILLR 153
Query: 262 EMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC---PPNVVTYTTVMSYLA 318
M GC P V SYS +++ +C + + ELL M G PNVVTYTTV+ L
Sbjct: 154 RMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLC 213
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDT 378
K+ + A + + M G +P++ + CLI+ + +E V + Q EM +G+ PD
Sbjct: 214 KAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQ-EMSTHGLQPDC 272
Query: 379 STFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLL 438
+ ++ +G +A ++ + + + + KPNV
Sbjct: 273 YIYAVLLDYLCKNGRCTEARNIFDSVIR-KGIKPNV------------------------ 307
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQ 498
T Y +++HG + M+G+ ++P + ++ +
Sbjct: 308 -------------TIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAK 354
Query: 499 KHMYDAAEKIEAVMKK 514
K M D A I M++
Sbjct: 355 KAMIDEAMHIFDKMRQ 370
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 104/226 (46%), Gaps = 2/226 (0%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTF 240
G+ ++A + D + + GL+ + T N LL CK +++ A S+F E L + P+ T+
Sbjct: 496 GRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTY 555
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
N +HG + R EA+ M + +Y+ II C+ + +++ + +
Sbjct: 556 NTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCS 615
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
+ ++ T ++ L K G E+A+ + + G PD + + L + ++E
Sbjct: 616 KDLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEE 675
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNK 406
++ M ENG AP++ N ++ H G +A L ++++
Sbjct: 676 LDELFSA-MEENGTAPNSRMLNALVRWLLHRGDINRAGAYLSKLDE 720
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 106/233 (45%), Gaps = 5/233 (2%)
Query: 166 VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSV 225
VT NT+ + + A + +DA F E+ GL + T N +L L + G+ A+ +
Sbjct: 518 VTYNTL---LHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKEL 574
Query: 226 FLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCR 284
+L + S N +T+NI I+G CK N VDEA + + + + +I + +
Sbjct: 575 YLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLK 634
Query: 285 QYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRF 344
+L + A G P+V TY + L K G EE + M+ G+ P+SR
Sbjct: 635 GGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRM 694
Query: 345 FNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKA 397
N L+ L + A Y ++ E + + ST + +I+++S + + A
Sbjct: 695 LNALVRWLLHRGDINRA-GAYLSKLDEKNFSLEASTTSMLISIYSRGEYQQLA 746
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 127/318 (39%), Gaps = 33/318 (10%)
Query: 213 LCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCV 272
+ + +V A LEL+ I AH+ ++ ++ K+ EM H V
Sbjct: 1 MSRSRRVTAAADRCLELERVIADRAHSGSLGLNDALKL---------FDEMLTHARPASV 51
Query: 273 ISYSTIIQSYCRQYNFSK---VYELLDEMQAQ---GCPPNVVTYTTVMSYLAKSGDFEEA 326
+++ ++ + R S V L + M + P+ TYT ++ + G +
Sbjct: 52 RAFNQLLTAVSRARCSSASELVVSLFNRMIRECSIKVAPSSFTYTILIGCFCRMGRLKHG 111
Query: 327 IRITEKMKIVGSK-PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMI 385
+ G + D+ F+ L+ L A RV EA + MPE G PD +++ ++
Sbjct: 112 FAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATDILLRRMPEFGCTPDVFSYSILL 171
Query: 386 TMFSHHGHHEKAFHVLEEM---NKLEHCKPNVQTFHPLLKSCFKTGKTDEC---LSQLLD 439
F + E+A +L M H PNV T+ ++ K D ++D
Sbjct: 172 KGFCNEKRAEEALELLSMMADDGDGSH-TPNVVTYTTVIDGLCKAQMVDRAKGVFQHMID 230
Query: 440 DMV--NKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV- 496
V N H TYT +IHG K + + +EM H + P ++LD +
Sbjct: 231 KGVRPNNH-------TYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLC 283
Query: 497 KQKHMYDAAEKIEAVMKK 514
K +A ++V++K
Sbjct: 284 KNGRCTEARNIFDSVIRK 301
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 112/410 (27%), Positives = 204/410 (49%), Gaps = 18/410 (4%)
Query: 83 VFQSLKQDH-VCNAIQPSHYLVNKLIHRFK--DDWKSALGIFRWAGSCPGYEHSSEIYEM 139
VF+SL++ + +C + LV K R D S + + + G PG + + +
Sbjct: 119 VFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDA 178
Query: 140 MVDILGKVRQMDQM-RALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
+ + + + + +LE ++ T N + +R F AG + A+ FD++ T G
Sbjct: 179 TIRSKRNISFAENVFKEMLESQVSPNVFTYNIL---IRGFCFAGNIDVALTLFDKMETKG 235
Query: 199 LEKNTETMNLLLDTLCKEGKVE----LARSVFLELKSCIPPNAHTFNIFIHGWCKINRVD 254
N T N L+D CK K++ L RS+ L+ + PN ++N+ I+G C+ R+
Sbjct: 236 CLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALK---GLEPNLISYNVVINGLCREGRMK 292
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
E + + EM G ++Y+T+I+ YC++ NF + + EM G P+V+TYT+++
Sbjct: 293 EVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLI 352
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
+ K+G+ A+ ++M++ G P+ R + L+ + + EA V + EM +NG
Sbjct: 353 HSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLR-EMNDNGF 411
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
+P T+N +I G E A VLE+M K + P+V ++ +L ++ DE L
Sbjct: 412 SPSVVTYNALINGHCVTGKMEDAIAVLEDM-KEKGLSPDVVSYSTVLSGFCRSYDVDEAL 470
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
++ +MV K + D TY+ +I G C + + A L++EM+ + P
Sbjct: 471 -RVKREMVEK-GIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPP 518
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/401 (26%), Positives = 188/401 (46%), Gaps = 54/401 (13%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
G E + Y ++++ L + +M ++ +L EM++ G+ + T +++ + G + A
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQA 329
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHG 246
+ E+ GL + T L+ ++CK G + A +++ + PN T+ + G
Sbjct: 330 LVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDG 389
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
+ + ++EA ++EM +G P V++Y+ +I +C +L++M+ +G P+
Sbjct: 390 FSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPD 449
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
VV+Y+TV+S +S D +EA+R+ +M G KPD+ ++ LI R +EA +Y+
Sbjct: 450 VVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYE 509
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM-------------------NK- 406
EM G+ PD T+ +I + G EKA + EM NK
Sbjct: 510 -EMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQ 568
Query: 407 --------------LEHCKPNVQTFHPLLKSC----FKT-----------GKTDECLSQL 437
E P+ T+H L+++C FK+ G E Q+
Sbjct: 569 SRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEA-DQV 627
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
+ M+ K+H D T Y ++IHG CRA AY L+KEM+
Sbjct: 628 FESMLGKNH-KPDGTAYNIMIHGHCRAGDIRKAYTLYKEMV 667
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 168/354 (47%), Gaps = 42/354 (11%)
Query: 198 GLEKNTETMNLLLD-TLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDE 255
G + N +LD T+ + + A +VF E L+S + PN T+NI I G+C +D
Sbjct: 164 GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDV 223
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
A +M+ GC P V++Y+T+I YC+ ++LL M +G PN+++Y V++
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283
Query: 316 YL-----------------------------------AKSGDFEEAIRITEKMKIVGSKP 340
L K G+F +A+ + +M G P
Sbjct: 284 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP 343
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
+ LI+++ +A + A+ +M G+ P+ T+ T++ FS G+ +A+ V
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFLD-QMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRV 402
Query: 401 LEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHG 460
L EMN P+V T++ L+ TGK ++ ++ +L+DM K LS D+ +Y+ V+ G
Sbjct: 403 LREMND-NGFSPSVVTYNALINGHCVTGKMEDAIA-VLEDMKEK-GLSPDVVSYSTVLSG 459
Query: 461 LCRANKCEWAYLLFKEMIGHDITPRYQT-CRLILDEVKQKHMYDAAEKIEAVMK 513
CR+ + A + +EM+ I P T LI +Q+ +A + E +++
Sbjct: 460 FCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLR 513
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 115/426 (26%), Positives = 205/426 (48%), Gaps = 25/426 (5%)
Query: 70 IISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIF---RWA 124
I SK ++ +E+ VF+ + + V P+ + N LI F + AL +F
Sbjct: 180 IRSKRNISFAEN-VFKEMLESQV----SPNVFTYNILIRGFCFAGNIDVALTLFDKMETK 234
Query: 125 GSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQ 183
G P + Y ++D K+R++D LL M+ KG L + V+ G+
Sbjct: 235 GCLP----NVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGR 290
Query: 184 WEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNI 242
++ E+ G + T N L+ CKEG A + E L+ + P+ T+
Sbjct: 291 MKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTS 350
Query: 243 FIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
IH CK ++ A + +M+ G P +Y+T++ + ++ ++ Y +L EM G
Sbjct: 351 LIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNG 410
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
P+VVTY +++ +G E+AI + E MK G PD ++ ++ R+ V EA+
Sbjct: 411 FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEAL 470
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLK 422
V + EM E G+ PDT T++++I F ++A + EEM ++ P+ T+ L+
Sbjct: 471 RVKR-EMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRV-GLPPDEFTYTALIN 528
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWA-----YLLFKEM 477
+ G ++ L QL ++MV K L D+ TY+++I+GL + ++ A L ++E
Sbjct: 529 AYCMEGDLEKAL-QLHNEMVEKGVLP-DVVTYSVLINGLNKQSRTREAKRLLLKLFYEES 586
Query: 478 IGHDIT 483
+ D+T
Sbjct: 587 VPSDVT 592
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 149/355 (41%), Gaps = 52/355 (14%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDA 187
G S Y ++ + K M++ L++M +G T ++ FS G +A
Sbjct: 340 GLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEA 399
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHG 246
R E+ G + T N L++ C GK+E A +V ++K + P+ +++ + G
Sbjct: 400 YRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSG 459
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
+C+ VDEA +EM G P I+YS++IQ +C Q + +L +EM G PP+
Sbjct: 460 FCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPD 519
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV-- 364
TYT +++ GD E+A+++ +M G PD ++ LI L + SR +EA +
Sbjct: 520 EFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLL 579
Query: 365 ---YQVEMPENGV--------------------------------------------APD 377
Y+ +P + PD
Sbjct: 580 KLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPD 639
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
+ +N MI G KA+ + +EM K V T L+K+ K GK +E
Sbjct: 640 GTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTV-TVIALVKALHKEGKVNE 693
>gi|357504477|ref|XP_003622527.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497542|gb|AES78745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 721
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 183/364 (50%), Gaps = 16/364 (4%)
Query: 117 ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALL---EEMSKGHI-VTLNTIA 172
A F W G+ H+ + Y +M++ILG+ + ++ R L E+ S G + +
Sbjct: 101 AFLFFNWIHE-KGFSHNPQTYFIMLEILGREKNLNIARNFLYSIEKRSNGEVKLEDRFFN 159
Query: 173 KVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC 232
++R + AG ++++V+ F+ + G+ T N +L L K G+ +A+ V+ E+
Sbjct: 160 SLIRSYGEAGLFKESVKLFENMKLIGVSPGVVTFNSVLLVLLKRGRTNMAKEVYDEMLKT 219
Query: 233 --IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSK 290
+ P+ +T+NI I G+CK + VDE + +EM C P V++Y+T++ CR
Sbjct: 220 YGVKPDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGKIKV 279
Query: 291 VYELLDEM--QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
+ L++ M + + P+VVTYTT++ + + +EA+ I E+M G KP+ +N L
Sbjct: 280 AHNLVNGMSKKCKDLSPDVVTYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVTYNTL 339
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
I L A + + + + + G PD TFNT+I G+ ++AF V E M KLE
Sbjct: 340 IKGLCEAQKWDKMKEILEQMKGDGGSIPDACTFNTLINSHCCAGNLDEAFKVFENMKKLE 399
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
+ ++ L+++ + G + L D++ K L +++Y L + KC
Sbjct: 400 -VSADSASYSVLIRTLCQKGDYGKA-EMLFDELFEKEIL---LSSYG--PKPLAASYKCM 452
Query: 469 WAYL 472
+ YL
Sbjct: 453 FQYL 456
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 104/205 (50%), Gaps = 3/205 (1%)
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM 369
+ +++ ++G F+E++++ E MK++G P FN ++ L + R A VY +
Sbjct: 158 FNSLIRSYGEAGLFKESVKLFENMKLIGVSPGVVTFNSVLLVLLKRGRTNMAKEVYDEML 217
Query: 370 PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
GV PDT T+N +I F + ++ F+ +EM + C P+V T++ L+ + GK
Sbjct: 218 KTYGVKPDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFD-CDPDVVTYNTLVDGLCRAGK 276
Query: 430 TDECLSQLLDDMVNK-HHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ L++ M K LS D+ TYT +I G CR + + A + +EM G + P T
Sbjct: 277 I-KVAHNLVNGMSKKCKDLSPDVVTYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVT 335
Query: 489 CRLILDEVKQKHMYDAAEKIEAVMK 513
++ + + +D ++I MK
Sbjct: 336 YNTLIKGLCEAQKWDKMKEILEQMK 360
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 107/209 (51%), Gaps = 9/209 (4%)
Query: 275 YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM- 333
++++I+SY F + +L + M+ G P VVT+ +V+ L K G A + ++M
Sbjct: 158 FNSLIRSYGEAGLFKESVKLFENMKLIGVSPGVVTFNSVLLVLLKRGRTNMAKEVYDEML 217
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
K G KPD+ +N LI + S V E Y ++ EM PD T+NT++ G
Sbjct: 218 KTYGVKPDTYTYNILIRGFCKNSMVDEGFYFFK-EMTSFDCDPDVVTYNTLVDGLCRAGK 276
Query: 394 HEKAFHVLEEMNKLEHCK---PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLD 450
+ A +++ M+K CK P+V T+ L++ + + DE L +L++M N L +
Sbjct: 277 IKVAHNLVNGMSK--KCKDLSPDVVTYTTLIRGYCRKQEVDEALD-ILEEM-NGRGLKPN 332
Query: 451 ITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
I TY +I GLC A K + + ++M G
Sbjct: 333 IVTYNTLIKGLCEAQKWDKMKEILEQMKG 361
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 87/398 (21%), Positives = 165/398 (41%), Gaps = 21/398 (5%)
Query: 93 CNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQM 150
C + P LI + K + AL I G + + Y ++ L + ++
Sbjct: 291 CKDLSPDVVTYTTLIRGYCRKQEVDEALDILEEMNG-RGLKPNIVTYNTLIKGLCEAQKW 349
Query: 151 DQMRALLEEMSK--GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNL 208
D+M+ +LE+M G I T ++ AG ++A + F+ + + ++ + ++
Sbjct: 350 DKMKEILEQMKGDGGSIPDACTFNTLINSHCCAGNLDEAFKVFENMKKLEVSADSASYSV 409
Query: 209 LLDTLCKEGKVELARSVFLEL-------KSCIP-PNAHTFNIFIHGWCKINRVDEAQWTI 260
L+ TLC++G A +F EL S P P A ++ C+ + +A+ +
Sbjct: 410 LIRTLCQKGDYGKAEMLFDELFEKEILLSSYGPKPLAASYKCMFQYLCENGKTKKAERVL 469
Query: 261 QEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKS 320
+++ G +SY +I +C++ ++ Y LL M + P++ Y ++ +
Sbjct: 470 RQLMKRGTQD-PLSYQIVILGHCKEGSYENGYGLLVWMLRRDFLPDIDIYDYLIDGFLRK 528
Query: 321 GDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTST 380
A EKM KP + ++ ++ L V E+ V V M E + + +
Sbjct: 529 DKPLLAKETLEKMLKSSYKPQTSTWHSILNRLLEQGCVHESAGVI-VMMLERNIRQNINF 587
Query: 381 FNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDD 440
+ + G +KAF + E + K C + L C K + C LL
Sbjct: 588 STKCLQLLFDRGLQDKAFKITELIYKNGFCVKMDEVVQFL---CNKRRALEAC-KLLLFS 643
Query: 441 MVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
+ N ++ DI +VI LC+ NK A+ L E++
Sbjct: 644 LKNNENI--DIGLCNIVILDLCKLNKASEAFSLCYELV 679
>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 576
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 186/376 (49%), Gaps = 16/376 (4%)
Query: 144 LGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNT 203
+G+ + Q+ +LEE G ++ + + ++ + +G+ E+A+R D +G + N
Sbjct: 127 IGRTKNASQIMGILEE--SGAVIDVTSYNVLISGYCKSGEIEEALRVLDRMG---VSPNA 181
Query: 204 ETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQE 262
T + +L +LC GK++ A V +L+S P+ T + I CK + V +A E
Sbjct: 182 ATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNE 241
Query: 263 MKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGD 322
M+ GC P V++Y+ +I+ +C+ + L ++ + GC P+V+++ ++ L G
Sbjct: 242 MRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGR 301
Query: 323 FEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFN 382
+ +A+++ M G P FN LI L + + +A+ V ++ MP++G P++ +FN
Sbjct: 302 WMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEM-MPKHGHTPNSRSFN 360
Query: 383 TMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC---LSQLLD 439
+I F + ++A LE M C P++ T++ LL + K GK D+ LSQL
Sbjct: 361 PLIQGFCNGKGIDRAIEYLEIMVS-RGCYPDIVTYNILLTALCKDGKVDDAVVILSQL-- 417
Query: 440 DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQK 499
+ S + +Y VI GL + K E A L +EM + P TC ++ + ++
Sbjct: 418 ---SSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSRE 474
Query: 500 HMYDAAEKIEAVMKKL 515
A K +K+
Sbjct: 475 GKVREAMKFFHYLKRF 490
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 169/347 (48%), Gaps = 7/347 (2%)
Query: 149 QMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN 207
++++ LE M+ KG + ++R F G+ ++A + L G + + N
Sbjct: 94 ELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSYN 153
Query: 208 LLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG 267
+L+ CK G++E A V + + PNA T++ + C ++ +A +
Sbjct: 154 VLISGYCKSGEIEEALRVLDRMG--VSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSK 211
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
C+P V++ + +I + C++ + +L +EM+ +GC P+VVTY ++ K G +EAI
Sbjct: 212 CYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAI 271
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITM 387
R +K+ G +PD N ++ +L R +A+ + M G P TFN +I
Sbjct: 272 RFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLAT-MLRKGCLPSVVTFNILINF 330
Query: 388 FSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHL 447
G KA +VLE M K H PN ++F+PL++ F GK + + L+ MV++
Sbjct: 331 LCQKGLLGKALNVLEMMPKHGH-TPNSRSFNPLIQG-FCNGKGIDRAIEYLEIMVSRGCY 388
Query: 448 SLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
DI TY +++ LC+ K + A ++ ++ +P + ++D
Sbjct: 389 P-DIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVID 434
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 162/372 (43%), Gaps = 14/372 (3%)
Query: 43 SYCSDGARLDHHQVLC--VDSPRLPDIDVIISKVHVGSSEDEVFQSLK--QDHVCNAIQP 98
S C G QVL + S PD+ + E V Q++K + +P
Sbjct: 190 SLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKP 249
Query: 99 SHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYE---MMVDILGKVRQMDQMRA 155
N LI F + I R+ P Y ++ ++ + R MD M+
Sbjct: 250 DVVTYNVLIKGFCKGGRLDEAI-RFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKL 308
Query: 156 LLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK 215
L + KG + ++ T ++ G A+ + + G N+ + N L+ C
Sbjct: 309 LATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCN 368
Query: 216 EGKVELARSVFLEL---KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCV 272
++ A +LE+ + C P + T+NI + CK +VD+A + ++ GC P +
Sbjct: 369 GKGIDRAIE-YLEIMVSRGCYP-DIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSL 426
Query: 273 ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEK 332
ISY+T+I + ELL+EM +G P+++T T+V+ L++ G EA++
Sbjct: 427 ISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHY 486
Query: 333 MKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
+K +P++ +N +I L ++ + A+ + +M G P +T+ T+I ++ G
Sbjct: 487 LKRFAIRPNAFIYNSIITGLCKSQQTSLAID-FLADMVAKGCKPTEATYTTLIKGITYEG 545
Query: 393 HHEKAFHVLEEM 404
E A + E+
Sbjct: 546 LAEDASKLSNEL 557
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 80/168 (47%), Gaps = 2/168 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +++ L K ++D +L ++S KG +L + V+ G+ E AV +E+
Sbjct: 394 YNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMC 453
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVD 254
GL+ + T ++ L +EGKV A F LK I PNA +N I G CK +
Sbjct: 454 YKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTS 513
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
A + +M GC P +Y+T+I+ + +L +E+ ++G
Sbjct: 514 LAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNELYSRG 561
>gi|242056423|ref|XP_002457357.1| hypothetical protein SORBIDRAFT_03g005950 [Sorghum bicolor]
gi|241929332|gb|EES02477.1| hypothetical protein SORBIDRAFT_03g005950 [Sorghum bicolor]
Length = 543
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 126/505 (24%), Positives = 225/505 (44%), Gaps = 34/505 (6%)
Query: 18 PLTSRIRFHSSSENCSHIVSSSPIE-SYCSDGARLDHHQVLC-----VDSPRLPDIDVII 71
PL++ R + +C V + E S S G HQV+ V SPR +
Sbjct: 20 PLSALRRLGVLAWHCPPTVRRNAAEGSVPSLGLPSPFHQVVVRSGNLVGSPRFCHATAGM 79
Query: 72 SKVHVGSSEDEVFQSLKQDHVCNA----------IQPSHYLVNKLIHRFKDDWKSALGIF 121
S EV + LK NA + ++ ++ + + +W+ AL F
Sbjct: 80 SDHLTDVYASEVLKVLKSTSADNADLSDALRRFAVHMDEDIILTVLQKQRSNWQVALAFF 139
Query: 122 RWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGH---IVTLNTIAKVMRRF 178
WA + PGY H S Y M+DILG+++++ MR L +E+ + +VT A ++ R+
Sbjct: 140 NWAATLPGYAHGSRAYTEMLDILGRMKKVRHMRQLFDEIPEERRVVVVTNKMFAVLLNRY 199
Query: 179 SGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAH 238
+GA + ++A+ F +G E + +LL +LC+ VE A ++F E K P
Sbjct: 200 AGAHKVQEAIEVFYLRKDYGFELDLVGFQILLMSLCRYKHVEEAEALFREKKDEFPHVTK 259
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
++NI ++GWC + +AQ ++ + +Y T I + + S +L +M
Sbjct: 260 SWNIILNGWCVKGSLRDAQRIWNDIIASKVERDLFTYGTFINALAKNGRISAAVKLFKKM 319
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRV 358
G P+V ++ L EA+ I +M + D +N LI L + R+
Sbjct: 320 WETGINPDVAICNCIIDQLCFKNRIPEALEIFGEMNDRLCQADVATYNTLIKYLCKKKRM 379
Query: 359 QEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH--CKPNVQT 416
E VY +M G +P+ T++ ++ EK V+ M ++E C+ + T
Sbjct: 380 -EKVYELLDDMEAKGCSPNNRTYSYVLKT------TEKPKDVIALMQRMEQTGCELDSDT 432
Query: 417 FHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKE 476
++ L+ + + K ++ + Q+ D+M ++ D ++T+++HGL K + A +
Sbjct: 433 YN-LILNLYTNWKYEKGVQQVWDEM-ERNGSGPDQRSFTIMVHGLHSQGKLDEALQYYTT 490
Query: 477 MIGHDITPRYQTCRLILDEVKQKHM 501
M + P +T L VK HM
Sbjct: 491 MKSRGMIPEPRTKIL----VKAMHM 511
>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 192/380 (50%), Gaps = 13/380 (3%)
Query: 133 SSEIYEMMVDILGKVRQMDQMRALLEEMSKGH----IVTLNTIAKVMRRFSGAGQWEDAV 188
S + E++ + L + ++D L +M K IV N K++ + ++E +
Sbjct: 47 SGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFN---KLLSAVAKMNKFELVI 103
Query: 189 RTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGW 247
+++ T G+ + T ++ ++ C+ ++ LA +V ++ K P+ T + ++G+
Sbjct: 104 SLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGY 163
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
C R+ +A + +M G P +++T+I S+ L+D+M +GC P++
Sbjct: 164 CHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDL 223
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
VTY TV++ L K GD + A+ + KM+ K + FN +I +L + V+ AV ++
Sbjct: 224 VTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLF-T 282
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKT 427
EM G+ P+ T+N++I ++G A +L M + + PNV TF+ L+ + FK
Sbjct: 283 EMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLE-KKINPNVVTFNALIDAFFKE 341
Query: 428 GKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
GK E +L ++M+ + + D TY L+I+G C N+ + A +FK M+ D P Q
Sbjct: 342 GKLVEA-EKLHEEMIQR-SIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQ 399
Query: 488 TCRLILDEV-KQKHMYDAAE 506
T +++ K K + D E
Sbjct: 400 TYNTLINGFCKCKRVEDGVE 419
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 182/368 (49%), Gaps = 8/368 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
G H Y + ++ + Q+ A+L +M K G+ + T++ ++ + + + DA
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIH 245
V D++ G + +T T L+ L K A ++ ++ + C P+ T+ ++
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGC-QPDLVTYGTVVN 231
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G CK +D A + +M+ V+ ++TII S C+ + +L EM+ +G P
Sbjct: 232 GLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRP 291
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
NVVTY ++++ L G + +A R+ M P+ FN LI + ++ EA ++
Sbjct: 292 NVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLH 351
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
+ EM + + PDT T+N +I F H ++A + + M + C PN+QT++ L+
Sbjct: 352 E-EMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVS-KDCLPNIQTYNTLINGFC 409
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
K + ++ + +L +M ++ L + TYT +I G +A C+ A ++FK+M+ + +
Sbjct: 410 KCKRVEDGV-ELFREM-SQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTD 467
Query: 486 YQTCRLIL 493
T ++L
Sbjct: 468 IMTYSILL 475
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 156/358 (43%), Gaps = 50/358 (13%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEM-SKG---HIVTLNTIAKVMRRFSGAGQWEDAVRTF 191
I+ ++D L K R ++ L EM +KG ++VT N++ + + G+W DA R
Sbjct: 260 IFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNY---GRWSDASRLL 316
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKI 250
+ + N T N L+D KEGK+ A + E+ + I P+ T+N+ I+G+C
Sbjct: 317 SNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMH 376
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
NR+DEA+ + M C P + +Y+T+I +C+ EL EM +G N VTY
Sbjct: 377 NRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTY 436
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
TT++ ++GD + A + + +M
Sbjct: 437 TTIIQGFFQAGDCDSAQMVFK------------------------------------QMV 460
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKT 430
N V D T++ ++ +G + A + + + K E + N+ ++ +++ K GK
Sbjct: 461 SNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEM-ELNIFIYNTMIEGMCKAGKV 519
Query: 431 DECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
E D+ + D+ TY +I GLC + A LF++M P T
Sbjct: 520 GEAW-----DLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGT 572
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/388 (23%), Positives = 181/388 (46%), Gaps = 9/388 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
GY+ + + ++ L + + AL+++M +G L T V+ G + A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHG 246
+ +++ ++ N N ++D+LCK VE+A +F E+++ I PN T+N I+
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C R +A + M +P V++++ +I ++ ++ + +L +EM + P+
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
+TY +++ +EA ++ + M P+ + +N LI + RV++ V +++
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFR 422
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
EM + G+ +T T+ T+I F G + A V ++M ++ T+ LL
Sbjct: 423 -EMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVS-NRVPTDIMTYSILLHGLCS 480
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
GK D L ++ + K + L+I Y +I G+C+A K A+ LF + I P
Sbjct: 481 YGKLDTAL--VIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDV 535
Query: 487 QTCRLILDEVKQKHMYDAAEKIEAVMKK 514
T ++ + K + A+ + MK+
Sbjct: 536 VTYNTMISGLCSKRLLQEADDLFRKMKE 563
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 125/265 (47%), Gaps = 9/265 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++++ ++D+ + + + M SK + + T ++ F + ED V F E+
Sbjct: 366 YNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMS 425
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVD 254
GL NT T ++ + G + A+ VF ++ S +P + T++I +HG C ++D
Sbjct: 426 QRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLD 485
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
A + ++ + Y+T+I+ C+ KV E D + P+VVTY T++
Sbjct: 486 TALVIFKYLQKSEMELNIFIYNTMIEGMCKA---GKVGEAWDLFCSLSIKPDVVTYNTMI 542
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI-YTLGRASRVQEAVYVYQVEMPENG 373
S L +EA + KMK G+ P+S +N LI L R A + EM +G
Sbjct: 543 SGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIK--EMRSSG 600
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAF 398
D ST +++T H G +K+F
Sbjct: 601 FVGDASTI-SLVTNMLHDGRLDKSF 624
>gi|413934769|gb|AFW69320.1| hypothetical protein ZEAMMB73_542469 [Zea mays]
Length = 539
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 180/360 (50%), Gaps = 30/360 (8%)
Query: 176 RRFSGAGQWEDAVRTFDEL----GTFGLEKNT-------ETMNLLLDTLCKEGKVELARS 224
RR++ G+ + AVRTF L G + +E + + L +D LCKEG A
Sbjct: 108 RRYARIGRTDSAVRTFRFLQRHPGRYAVESDVTPSAEALSPLILTIDALCKEGHPRAAAL 167
Query: 225 VFLELK---SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQS 281
+ +++ P+ +NI ++GW + R+D+A+ M+ G P V++Y T I +
Sbjct: 168 LVAQIRREDDGWAPDVRIYNILLNGWSRARRLDKAEKLWAAMRDEGVRPTVVTYGTFIDA 227
Query: 282 YCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPD 341
+C LLD+M+ +G N++T ++ LA +G F +A ++ EK + G P+
Sbjct: 228 HCVMRRPDHAMALLDQMREEGIEANLLTCNPIVYALAHAGRFGDAHKVLEKFPLYGVAPN 287
Query: 342 SRFFNCLIY------TLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHE 395
FN L++ L ASRV +A M G++P T+N T+F+ + +
Sbjct: 288 ISTFNSLVFGYCRHGDLAGASRVLKA-------MLGRGISPTARTYNYFFTVFARNLSID 340
Query: 396 KAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYT 455
++ +M + P+ T+H L+K + + + L Q+L +M N D+ T T
Sbjct: 341 LGMNLYVKMVSNGYA-PDRLTYHLLIKMLCEANRLELTL-QMLQEMRNS-GFEPDLATST 397
Query: 456 LVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
++IH LCR ++ E A+ F++M + P+Y T R+++ E+K+ + +K+ +M+ +
Sbjct: 398 MLIHLLCRRHQFEEAFAEFEQMFERGMVPQYITYRMLMRELKRLGLVKLVQKLADLMRSV 457
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 129/306 (42%), Gaps = 14/306 (4%)
Query: 61 SPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGI 120
SP + ID + + H ++ V Q ++D + P + N L+ + W A +
Sbjct: 147 SPLILTIDALCKEGHPRAAALLVAQIRRED---DGWAPDVRIYNILL----NGWSRARRL 199
Query: 121 FR----WAG-SCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKV 174
+ WA G + Y +D +R+ D ALL++M + I L T +
Sbjct: 200 DKAEKLWAAMRDEGVRPTVVTYGTFIDAHCVMRRPDHAMALLDQMREEGIEANLLTCNPI 259
Query: 175 MRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCI 233
+ + AG++ DA + ++ +G+ N T N L+ C+ G + A V L I
Sbjct: 260 VYALAHAGRFGDAHKVLEKFPLYGVAPNISTFNSLVFGYCRHGDLAGASRVLKAMLGRGI 319
Query: 234 PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
P A T+N F + + +D +M +G P ++Y +I+ C +
Sbjct: 320 SPTARTYNYFFTVFARNLSIDLGMNLYVKMVSNGYAPDRLTYHLLIKMLCEANRLELTLQ 379
Query: 294 LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLG 353
+L EM+ G P++ T T ++ L + FEEA E+M G P + L+ L
Sbjct: 380 MLQEMRNSGFEPDLATSTMLIHLLCRRHQFEEAFAEFEQMFERGMVPQYITYRMLMRELK 439
Query: 354 RASRVQ 359
R V+
Sbjct: 440 RLGLVK 445
>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 725
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 194/427 (45%), Gaps = 37/427 (8%)
Query: 113 DWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTI 171
D +++ +F+ AG+ GY H+ + +++D LG V + LL++M +G + +
Sbjct: 78 DIPTSMELFQRAGAQKGYSHTFDACYLLIDKLGAVGDFKVIEKLLKQMKDEGLLFKESLF 137
Query: 172 AKVMRRFSGAGQWEDAVRTF-DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK 230
+M+ + AG A R D G + + ++ N++LD L +A +VF ++
Sbjct: 138 ILIMKHYGKAGLPGQATRLLLDMWGVYSCDPTFKSYNVVLDILVDGDCPRVAPNVFYDML 197
Query: 231 S-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFS 289
S + P +TF + + C ++ VD A +++M HGC P + Y T+I + C S
Sbjct: 198 SRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVS 257
Query: 290 KVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG------------ 337
+ +LL++M C P+V T+ V+ L ++G EA ++ ++M + G
Sbjct: 258 EALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLM 317
Query: 338 -------------------SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDT 378
P++ +N LI + R +EA + M G PD
Sbjct: 318 HGLCRMGQVDEARALLNKIPNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDA 377
Query: 379 STFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLL 438
TFN MI G+ A +L EM + +PNV T+ L+ K G+ +E ++++
Sbjct: 378 YTFNIMIDGLVKKGYLVSALELLNEMVA-KRFEPNVITYTILINGFCKQGRLEEA-AEIV 435
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQ 498
+ M K LSL+ Y +I LC+ E A LF EM G P T +++ + +
Sbjct: 436 NSMSAK-GLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCK 494
Query: 499 KHMYDAA 505
H + A
Sbjct: 495 NHKMEEA 501
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 189/379 (49%), Gaps = 9/379 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAV 188
G+ + Y ++ L ++ Q+D+ RALL ++ + V NT+ + + +G++E+A
Sbjct: 305 GFSTDALTYGYLMHGLCRMGQVDEARALLNKIPNPNTVLYNTL---ISGYVASGRFEEAK 361
Query: 189 RT-FDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHG 246
++ + G E + T N+++D L K+G + A + E+ + PN T+ I I+G
Sbjct: 362 DLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILING 421
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
+CK R++EA + M G + Y+ +I + C+ N + +L EM +GC P+
Sbjct: 422 FCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPD 481
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
+ T+ ++++ L K+ EEA+ + M + G ++ +N L++ +Q+A +
Sbjct: 482 IYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVD 541
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
EM G D T+N +I G EK + EEM + P + + + L+ +
Sbjct: 542 -EMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLG-KGIFPTIISCNILISGLCR 599
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
TGK ++ L + L DM+++ L+ DI TY +I+GLC+ + A LF ++ I P
Sbjct: 600 TGKVNDAL-KFLQDMIHRG-LTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDA 657
Query: 487 QTCRLILDEVKQKHMYDAA 505
T ++ + M++ A
Sbjct: 658 ITYNTLISRHCHEGMFNDA 676
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 111/411 (27%), Positives = 196/411 (47%), Gaps = 45/411 (10%)
Query: 133 SSEIYEMMVDILGKVRQMDQMRALLEEM----SKGHIVTLNTIAKVMRRFSGAGQWEDAV 188
+S IY+ ++ L + ++ + LLE+M + + T N + + R AG+ +A
Sbjct: 239 NSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCR---AGRIHEAA 295
Query: 189 RTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSV----------------------- 225
+ D + G + T L+ LC+ G+V+ AR++
Sbjct: 296 KLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPNPNTVLYNTLISGYVASG 355
Query: 226 -FLELKSCI---------PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISY 275
F E K + P+A+TFNI I G K + A + EM P VI+Y
Sbjct: 356 RFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITY 415
Query: 276 STIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKI 335
+ +I +C+Q + E+++ M A+G N V Y ++ L K G+ EEA+++ +M
Sbjct: 416 TILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSG 475
Query: 336 VGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHE 395
G KPD FN LI L + +++EA+ +Y +M GV +T T+NT++ F +
Sbjct: 476 KGCKPDIYTFNSLINGLCKNHKMEEALSLYH-DMFLEGVIANTVTYNTLVHAFLMRDSIQ 534
Query: 396 KAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYT 455
+AF +++EM C + T++ L+K+ KTG ++ L L ++M+ K I +
Sbjct: 535 QAFKLVDEM-LFRGCPLDNITYNGLIKALCKTGAVEKGLG-LFEEMLGKGIFP-TIISCN 591
Query: 456 LVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAA 505
++I GLCR K A ++MI +TP T +++ + K H+ +A+
Sbjct: 592 ILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEAS 642
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 143/333 (42%), Gaps = 46/333 (13%)
Query: 59 VDSPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKS 116
+ +P + +IS +E L + V +P Y N +I K S
Sbjct: 336 IPNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVS 395
Query: 117 ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAK-- 173
AL + + +E + Y ++++ K ++++ ++ MS KG ++LNT+
Sbjct: 396 ALELLNEMVA-KRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKG--LSLNTVGYNC 452
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSV----FLE- 228
++ G E+A++ F E+ G + + T N L++ LCK K+E A S+ FLE
Sbjct: 453 LICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEG 512
Query: 229 --------------------------------LKSCIPPNAHTFNIFIHGWCKINRVDEA 256
+ C P + T+N I CK V++
Sbjct: 513 VIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGC-PLDNITYNGLIKALCKTGAVEKG 571
Query: 257 QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSY 316
+EM G G P +IS + +I CR + + L +M +G P++VTY ++++
Sbjct: 572 LGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLING 631
Query: 317 LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
L K G +EA + K++ G +PD+ +N LI
Sbjct: 632 LCKMGHVQEASNLFNKLQSEGIRPDAITYNTLI 664
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 114/239 (47%), Gaps = 7/239 (2%)
Query: 115 KSALGIFRWAGSCPGYEHSSEIYEM--MVDILGKVRQMDQMRALLEEMS-KGHIVTLNTI 171
+ AL +F G G +IY +++ L K +M++ +L +M +G I T
Sbjct: 464 EEALQLF---GEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTY 520
Query: 172 AKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LK 230
++ F + A + DE+ G + T N L+ LCK G VE +F E L
Sbjct: 521 NTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLG 580
Query: 231 SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSK 290
I P + NI I G C+ +V++A +Q+M G P +++Y+++I C+ + +
Sbjct: 581 KGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQE 640
Query: 291 VYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
L +++Q++G P+ +TY T++S G F +A + K G P+ ++ LI
Sbjct: 641 ASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILI 699
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 80/156 (51%), Gaps = 6/156 (3%)
Query: 166 VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSV 225
+T N + K + + G E + F+E+ G+ + N+L+ LC+ GKV A
Sbjct: 553 ITYNGLIKALCK---TGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALK- 608
Query: 226 FLE--LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYC 283
FL+ + + P+ T+N I+G CK+ V EA +++ G P I+Y+T+I +C
Sbjct: 609 FLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHC 668
Query: 284 RQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK 319
+ F+ LL + G PN VT++ +++Y+ K
Sbjct: 669 HEGMFNDACLLLYKGVDSGFIPNEVTWSILINYIVK 704
>gi|15238925|ref|NP_199046.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75154282|sp|Q8L844.1|PP413_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g42310, mitochondrial; Flags: Precursor
gi|21539517|gb|AAM53311.1| maize crp1 protein-like [Arabidopsis thaliana]
gi|332007411|gb|AED94794.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 709
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 178/356 (50%), Gaps = 17/356 (4%)
Query: 81 DEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKD-----DWKSALGIFRWAGSCPGYEHSSE 135
+ +F+ L+Q + I+P N L+ + D +S + G P EH+
Sbjct: 324 EALFEELRQ----SGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPD-EHT-- 376
Query: 136 IYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTI-AKVMRRFSGAGQWEDAVRTFDEL 194
Y +++D + + R +L+EM G + + + ++++ F G+W+ + E+
Sbjct: 377 -YSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEM 435
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRV 253
+ G++ + + N+++DT K ++ A + F + S I P+ T+N I CK R
Sbjct: 436 KSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRH 495
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
A+ + M+ GC PC +Y+ +I SY Q + + LL +M++QG PNVVT+TT+
Sbjct: 496 IVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTL 555
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
+ KSG F +AI E+MK VG KP S +N LI + ++AV ++V M +G
Sbjct: 556 VDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRV-MTSDG 614
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
+ P N++I F +AF VL+ M K KP+V T+ L+K+ + K
Sbjct: 615 LKPSLLALNSLINAFGEDRRDAEAFAVLQYM-KENGVKPDVVTYTTLMKALIRVDK 669
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/388 (22%), Positives = 182/388 (46%), Gaps = 8/388 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQ--MRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWE 185
GY+ Y +++ L + ++D + L +E+ + + + + + ++ F+ +G
Sbjct: 227 GYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPS 286
Query: 186 DAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFI 244
A++ GL T T+ ++ L G+ A ++F EL+ S I P +N +
Sbjct: 287 KALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALL 346
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
G+ K + +A+ + EM+ G P +YS +I +Y + +L EM+A
Sbjct: 347 KGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQ 406
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
PN ++ +++ G++++ ++ ++MK +G KPD +F+N +I T G+ + + A+
Sbjct: 407 PNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTT 466
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
+ M G+ PD T+NT+I HG H A + E M + C P T++ ++ S
Sbjct: 467 FD-RMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMER-RGCLPCATTYNIMINSY 524
Query: 425 FKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
+ D+ + +LL M ++ L ++ T+T ++ ++ + A +EM + P
Sbjct: 525 GDQERWDD-MKRLLGKMKSQGILP-NVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKP 582
Query: 485 RYQTCRLILDEVKQKHMYDAAEKIEAVM 512
+++ Q+ + + A VM
Sbjct: 583 SSTMYNALINAYAQRGLSEQAVNAFRVM 610
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 144/342 (42%), Gaps = 58/342 (16%)
Query: 59 VDSPRLPDIDVIISKVHV-GSSEDEVFQSLKQDHVCNA-----------------IQPSH 100
V + L D + ++S++ G S DE SL D NA +QP+
Sbjct: 350 VKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNS 409
Query: 101 YLVNKLIHRFKD--DWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLE 158
++ ++L+ F+D +W+ + + S G + + Y +++D GK +D +
Sbjct: 410 FVFSRLLAGFRDRGEWQKTFQVLKEMKSI-GVKPDRQFYNVVIDTFGKFNCLDHAMTTFD 468
Query: 159 EM-SKG--------------------HIVTLNTIAKVMRR---------------FSGAG 182
M S+G HIV + RR +
Sbjct: 469 RMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQE 528
Query: 183 QWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFN 241
+W+D R ++ + G+ N T L+D K G+ A E+KS + P++ +N
Sbjct: 529 RWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYN 588
Query: 242 IFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ 301
I+ + + ++A + M G P +++ +++I ++ ++ + +L M+
Sbjct: 589 ALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKEN 648
Query: 302 GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSR 343
G P+VVTYTT+M L + F++ + E+M + G KPD +
Sbjct: 649 GVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRK 690
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 135/332 (40%), Gaps = 50/332 (15%)
Query: 220 ELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
+L + L K + P T+N I + N +++A I +M+ G ++YS +I
Sbjct: 182 KLYEAFLLSQKQTLTP--LTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVI 239
Query: 280 QSYCRQYNF-------------------------------------SKVYELLDEMQAQG 302
QS R SK +LL QA G
Sbjct: 240 QSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATG 299
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
T +++S LA SG EA + E+++ G KP +R +N L+ + +++A
Sbjct: 300 LSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAE 359
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLK 422
+ EM + GV+PD T++ +I + + G E A VL+EM + +PN F LL
Sbjct: 360 SMVS-EMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGD-VQPNSFVFSRLLA 417
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
G+ + Q+L +M + D Y +VI + N + A F M+ I
Sbjct: 418 GFRDRGEWQKTF-QVLKEM-KSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGI 475
Query: 483 TPRYQTCRLILD-------EVKQKHMYDAAEK 507
P T ++D + + M++A E+
Sbjct: 476 EPDRVTWNTLIDCHCKHGRHIVAEEMFEAMER 507
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 107/254 (42%), Gaps = 46/254 (18%)
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
C + YS +I + R K+YE Q Q P +TY ++ A++ D E+A+
Sbjct: 163 CFSYELLYSILIHALGRS---EKLYEAFLLSQKQTLTP--LTYNALIGACARNNDIEKAL 217
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY--VYQVEMPENGVAPDTSTFNTMI 385
+ KM+ G + D ++ +I +L R++++ + +Y+ E+ + + D N +I
Sbjct: 218 NLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYK-EIERDKLELDVQLVNDII 276
Query: 386 TMFSHHGHHEKAFHVL-----------------------------------EEMNKLEHC 410
F+ G KA +L EE+ +
Sbjct: 277 MGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQ-SGI 335
Query: 411 KPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWA 470
KP + ++ LLK KTG + S + + + K +S D TY+L+I A + E A
Sbjct: 336 KPRTRAYNALLKGYVKTGPLKDAESMVSE--MEKRGVSPDEHTYSLLIDAYVNAGRWESA 393
Query: 471 YLLFKEMIGHDITP 484
++ KEM D+ P
Sbjct: 394 RIVLKEMEAGDVQP 407
>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
Length = 755
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 194/377 (51%), Gaps = 12/377 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++D L K + +D+ + + ++M +G T ++ + G+W++ V+ +E+
Sbjct: 199 YTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMS 258
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
T GLE + T LLLD LCK G+ AR F + + I P+ + I +HG+ +
Sbjct: 259 THGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALS 318
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
E + M G+G P ++ + +Y ++ + + ++M+ QG P+VV++ ++
Sbjct: 319 EMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALI 378
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIY---TLGRASRVQEAVYVYQVEMPE 371
L K G ++A+ +M G P+ F+ L+Y T+G+ + +E + E+ +
Sbjct: 379 DALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFF----EVLD 434
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
G+ D FNT++ + G +A +++ M ++ +PNV +++ L+ TG+ D
Sbjct: 435 QGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRV-GVRPNVISYNTLVAGHCLTGRID 493
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRL 491
E ++LLD MV+ + L + TYT+++ G C+A + + AY LF+EM+ +TP T
Sbjct: 494 EA-AKLLDVMVS-NGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNT 551
Query: 492 ILDEVKQKHMYDAAEKI 508
IL + Q + A ++
Sbjct: 552 ILHGLFQTGRFSEANEL 568
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/415 (24%), Positives = 186/415 (44%), Gaps = 13/415 (3%)
Query: 71 ISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCP 128
+ K V VFQ + + ++P + N LIH + WK + + S
Sbjct: 206 LCKAQVVDRAKGVFQQM----IDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEM-STH 260
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G E Y +++D L K + + R + M KG + A ++ ++ G +
Sbjct: 261 GLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEM 320
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHG 246
D + G+ N N++ K+ +E A +F +++ + P+ +F I
Sbjct: 321 HSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDA 380
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
CK+ RVD+A +M G P + +S+++ C + K EL E+ QG +
Sbjct: 381 LCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVD 440
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
V + T+M L G EA R+ + M VG +P+ +N L+ R+ EA +
Sbjct: 441 AVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLD 500
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
V M NG+ P+ T+ ++ + + A+ + EM ++ P V T++ +L F+
Sbjct: 501 V-MVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREM-LMKGVTPVVATYNTILHGLFQ 558
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHD 481
TG+ E ++L +M+N DI TY ++++GLC+ N + A+ +F+ + D
Sbjct: 559 TGRFSEA-NELYLNMINSRT-KCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKD 611
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 164/378 (43%), Gaps = 46/378 (12%)
Query: 150 MDQMRALLEEM----SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG---TFGLEKN 202
+D+ L +E+ + N + V+ R + E V F + + + N
Sbjct: 30 LDEALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAPN 89
Query: 203 TETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRVDEA-QWTI 260
T ++L+ C+ G++E + F L LK+ N + + G C RVDEA +
Sbjct: 90 ACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILL 149
Query: 261 QEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKS 320
M GC P V++Y+T+I + R+ K Y L EM QG PPNVVTYTTV+ L K+
Sbjct: 150 LRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKA 209
Query: 321 GDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTST 380
+ A + ++M G KPD+ +NCLI+ + +E V + + EM +G+ PD T
Sbjct: 210 QVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLE-EMSTHGLEPDCIT 268
Query: 381 FNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDD 440
+ ++ +G +A + M + + KP+V + LL G E + LD
Sbjct: 269 YALLLDYLCKNGRCREARLFFDSMFR-KGIKPDVAIYAILLHGYATKGALSE-MHSFLDL 326
Query: 441 MVN----------------------------------KHHLSLDITTYTLVIHGLCRANK 466
MV + LS D+ ++ +I LC+ +
Sbjct: 327 MVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGR 386
Query: 467 CEWAYLLFKEMIGHDITP 484
+ A L F +MI +TP
Sbjct: 387 VDDAVLQFNQMINEGVTP 404
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 165/377 (43%), Gaps = 15/377 (3%)
Query: 65 PDIDVIISKVHVGSSEDEV--FQSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGI 120
PD+ + +H +++ + S V N + P+ + N + + K + A+ I
Sbjct: 299 PDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHI 358
Query: 121 F---RWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMR 176
F R G P + ++D L K+ ++D +M ++G + + ++
Sbjct: 359 FNKMRQQGLSPDVVS----FGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVY 414
Query: 177 RFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV-ELARSVFLELKSCIPP 235
G+WE A F E+ G+ + N L+ LC EG+V E R + L ++ + P
Sbjct: 415 GLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRP 474
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
N ++N + G C R+DEA + M +G P +Y+ +++ YC+ Y L
Sbjct: 475 NVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLF 534
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
EM +G P V TY T++ L ++G F EA + M +K D +N ++ L +
Sbjct: 535 REMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKN 594
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQ 415
+ V EA +++ + D+ TFN MI G E A + ++ P+V
Sbjct: 595 NFVDEAFKMFR-RLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAY-GLVPDVV 652
Query: 416 TFHPLLKSCFKTGKTDE 432
T+ + ++ + G E
Sbjct: 653 TYRLIAENLIEEGSLGE 669
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 116/252 (46%), Gaps = 5/252 (1%)
Query: 149 QMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN 207
++D+ LL+ M S G T ++R + A + +DA F E+ G+ T N
Sbjct: 491 RIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYN 550
Query: 208 LLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
+L L + G+ A ++L + S + +T+NI ++G CK N VDEA + +
Sbjct: 551 TILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSK 610
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
++++ +I + + +L + A G P+VVTY + L + G E
Sbjct: 611 DPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEF 670
Query: 327 IRITEKMKIVGSKPDSRFFNCLI-YTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMI 385
+ M+ G+ P+S N L+ L R + VY+Y+++ E + + ST + +I
Sbjct: 671 DGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYLYKLD--EKNFSLEASTTSMLI 728
Query: 386 TMFSHHGHHEKA 397
+++S + A
Sbjct: 729 SLYSRGEYQPHA 740
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 88/203 (43%), Gaps = 9/203 (4%)
Query: 313 VMSYLAKSGDF--EEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA--SRVQEAVYVYQVE 368
V++ A+SG +EA+++ +++ R FN L+ + RA S E V
Sbjct: 18 VIASRARSGSLGLDEALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTR 77
Query: 369 MPE---NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
M + VAP+ T++ +I F G E F + K + NV LLK
Sbjct: 78 MARECSSKVAPNACTYSILIGCFCRMGRLEHGFAAFGLILK-TGWRVNVIVISQLLKGLC 136
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
+ DE LL M ++ D+ Y VI+G R + E AY LF EM+ I P
Sbjct: 137 DAKRVDEATDILLLRM-SEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPN 195
Query: 486 YQTCRLILDEVKQKHMYDAAEKI 508
T ++D + + + D A+ +
Sbjct: 196 VVTYTTVIDGLCKAQVVDRAKGV 218
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 86/200 (43%), Gaps = 2/200 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G + + Y +++ K R++D +L EM KG + T ++ G++ +A
Sbjct: 506 GLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEA 565
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPP-NAHTFNIFIHG 246
+ + + + T N++L+ LCK V+ A +F L S P ++ TFNI I
Sbjct: 566 NELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGA 625
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
K R ++A + +G P V++Y I ++ + + + L M+ G PN
Sbjct: 626 LLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPN 685
Query: 307 VVTYTTVMSYLAKSGDFEEA 326
++ L GD A
Sbjct: 686 SHMLNALVRRLLHRGDISRA 705
>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
Length = 807
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 192/415 (46%), Gaps = 16/415 (3%)
Query: 97 QPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRAL 156
Q S LV ++H K+ +SA+ F WAG+ + H+ Y + L + Q ++ L
Sbjct: 54 QLSQRLVGVILHMVKNG-ESAMVFFGWAGTRQDFRHTVHTYNCFYEALIRTGQCEEAYRL 112
Query: 157 LEEMSKGHIVTLN-TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK 215
+E ++ + T ++R G+ + A ++E+ GL T LL+ LCK
Sbjct: 113 FKEKWPQELIPDSITYGILIRGLCNFGKLKLACSLYEEMVDRGLRPVVLTCKFLLNALCK 172
Query: 216 EGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISY 275
G +ELA F ++ S P A T+ I I G + RVDEA + +EMK H P +Y
Sbjct: 173 SGNLELALRYFEKMSSI--PCAATWTILIDGLFRAIRVDEACYYFEEMK-HTAIPNNWTY 229
Query: 276 STIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKI 335
+ +I + ++ +L EM P + YT+V+ K+GD +A + E MK
Sbjct: 230 TVVINGLVKAGKVAEAERVLQEMPV----PTLANYTSVIGGHCKAGDMGKAYHLLEDMKR 285
Query: 336 VGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV--EMPENGVAPDTSTFNTMITMFSHHGH 393
G + D+ +N LI+ R+QE Y++ EM N PD T++ +I
Sbjct: 286 KGYQGDNLTYNTLIHG---HCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKR 342
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
+A +L + + C PNV +++ L+ K + ++ L+ + H D+ T
Sbjct: 343 LSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQH--PDVVT 400
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
Y+ +I GLC A + A+ +EM+G I P+ ++ + + DAA +
Sbjct: 401 YSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTV 455
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 109/424 (25%), Positives = 185/424 (43%), Gaps = 40/424 (9%)
Query: 81 DEVFQSLKQDHVCNAIQPSHYLVNKLIH-RFKDDWKSALGIFRWAGSCPGYEHSSEIYEM 139
D +F++++ D C Y ++ H ++W + I + E + EM
Sbjct: 200 DGLFRAIRVDEAC-------YYFEEMKHTAIPNNWTYTVVINGLVKAGKVAEAERVLQEM 252
Query: 140 MVDILG----------KVRQMDQMRALLEEMSK----GHIVTLNTIAKVMRRFSGAGQWE 185
V L K M + LLE+M + G +T NT+ R + +
Sbjct: 253 PVPTLANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQ---EID 309
Query: 186 DAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS---CIPPNAHTFNI 242
A +E+ + + T ++L+ LC+ ++ AR + L++ C P N ++N
Sbjct: 310 RAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTP-NVVSYNT 368
Query: 243 FIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
I G+ K RV++A EM G HP V++YST+I+ C S+ + L+EM +
Sbjct: 369 LIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKK 428
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
P V Y++V+S L ++G+ + A + + M G +P+ +N LIY L + R+ +A
Sbjct: 429 ILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAK 488
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLK 422
+ EM E G +PD T+ T+I ++A + + LE +T
Sbjct: 489 LRVK-EMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLY--VRSLEQGIEISET------ 539
Query: 423 SCFKTGKTDECL--SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH 480
SC + CL +Q + +V S Y VI LC+ N A L ++MIG
Sbjct: 540 SCNVVIASLRCLEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGA 599
Query: 481 DITP 484
I P
Sbjct: 600 GIKP 603
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 168/394 (42%), Gaps = 21/394 (5%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAV 188
GY+ + Y ++ +++++D+ LLEEM V ++ +G + +
Sbjct: 287 GYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDIL--IAGLCRAKRLS 344
Query: 189 RTFDELGTFGLEK----NTETMNLLLDTLCKEGKVELARSVFLELKSCIP-PNAHTFNIF 243
D LGT E N + N L+D K +V A +FLE+ + P+ T++
Sbjct: 345 EARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTL 404
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
I G C R EA ++EM G P V YS++I CR + D M A GC
Sbjct: 405 IRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGC 464
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
PN+ Y +++ L K+G +A ++M G PD + LI L R SR EA
Sbjct: 465 QPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACD 524
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
+Y V E G+ ++ N +I ++ V+ P + +++S
Sbjct: 525 LY-VRSLEQGIEISETSCNVVIASLRCLEQAQRVLRVVLATGN----SPTAFFYATVIES 579
Query: 424 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
K E QLL+DM+ + D +T ++ +CR +K A +EM+
Sbjct: 580 LCKENNLAEA-RQLLEDMIGA-GIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSK 637
Query: 484 PRYQTCRLILDEVKQKHMYDAAEKIEA--VMKKL 515
P T +L+ ++ A + EA V+++L
Sbjct: 638 PSVGTYSTLLNA-----LFKAGKPSEAHVVLRRL 666
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/451 (23%), Positives = 185/451 (41%), Gaps = 77/451 (17%)
Query: 137 YEMMVDILGKVRQMDQMRALL-----EEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTF 191
Y++++ L + +++ + R LL E+ ++V+ NT+ + FS A + DA + F
Sbjct: 330 YDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTL---IDGFSKAARVNDAYQLF 386
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKI 250
E+ T G + T + L+ LC G+ A S E+ I P ++ I G C+
Sbjct: 387 LEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRA 446
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
+D A M +GC P + Y+++I C+ + EM +GC P+ VTY
Sbjct: 447 GELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTY 506
Query: 311 TTVMSYLAKSG-----------DFEEAIRITEK------------------MKIV---GS 338
T++ L + E+ I I+E +++V G+
Sbjct: 507 GTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIASLRCLEQAQRVLRVVLATGN 566
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
P + F+ +I +L + + + EA + + +M G+ PD ST + ++ A
Sbjct: 567 SPTAFFYATVIESLCKENNLAEARQLLE-DMIGAGIKPDGSTVDALVGAMCRQDKAVVAM 625
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC---LSQLLD---------------- 439
LEEM +L KP+V T+ LL + FK GK E L +L+
Sbjct: 626 AFLEEMVRL-GSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLISHTSCFPDELWYVGLIA 684
Query: 440 -----DMVNKHHLSL----------DITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
D V + L I Y ++ GL R + Y L +EM ++
Sbjct: 685 AYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLLKGLFRTRNLQMVYELLREMKRNEFVV 744
Query: 485 RYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
T +++ + D A ++ + MKK+
Sbjct: 745 NEATFNILIQGFCRLGQTDRAVRVLSEMKKV 775
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/397 (22%), Positives = 177/397 (44%), Gaps = 40/397 (10%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ L + + + LEEM I+ + + V+ AG+ + A FD +
Sbjct: 401 YSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMV 460
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRV 253
G + N N L+ LCK G++ A+ E+ + C P+ T+ I G C+ +R
Sbjct: 461 ANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGC-SPDGVTYGTLIVGLCRWSRT 519
Query: 254 DEA--------------------------------QWTIQEMKGHGCHPCVISYSTIIQS 281
DEA Q ++ + G P Y+T+I+S
Sbjct: 520 DEACDLYVRSLEQGIEISETSCNVVIASLRCLEQAQRVLRVVLATGNSPTAFFYATVIES 579
Query: 282 YCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPD 341
C++ N ++ +LL++M G P+ T ++ + + A+ E+M +GSKP
Sbjct: 580 LCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPS 639
Query: 342 SRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVL 401
++ L+ L +A + EA V + + PD + +I +S+ E+A +VL
Sbjct: 640 VGTYSTLLNALFKAGKPSEAHVVLRRLISHTSCFPDELWYVGLIAAYSNQDQVEEARNVL 699
Query: 402 EEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGL 461
+E+ K + ++ ++ LLK F+T + + + +LL +M ++ ++ T+ ++I G
Sbjct: 700 QEL-KSKWGIQSIVAYNTLLKGLFRT-RNLQMVYELLREM-KRNEFVVNEATFNILIQGF 756
Query: 462 CRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQ 498
CR + + A + EM +TP + ++DE+ +
Sbjct: 757 CRLGQTDRAVRVLSEM-KKVLTPSAAIIKFLVDELAR 792
>gi|10177016|dbj|BAB10204.1| maize crp1 protein-like [Arabidopsis thaliana]
Length = 680
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 178/356 (50%), Gaps = 17/356 (4%)
Query: 81 DEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKD-----DWKSALGIFRWAGSCPGYEHSSE 135
+ +F+ L+Q + I+P N L+ + D +S + G P EH+
Sbjct: 295 EALFEELRQ----SGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPD-EHT-- 347
Query: 136 IYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTI-AKVMRRFSGAGQWEDAVRTFDEL 194
Y +++D + + R +L+EM G + + + ++++ F G+W+ + E+
Sbjct: 348 -YSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEM 406
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRV 253
+ G++ + + N+++DT K ++ A + F + S I P+ T+N I CK R
Sbjct: 407 KSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRH 466
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
A+ + M+ GC PC +Y+ +I SY Q + + LL +M++QG PNVVT+TT+
Sbjct: 467 IVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTL 526
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
+ KSG F +AI E+MK VG KP S +N LI + ++AV ++V M +G
Sbjct: 527 VDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRV-MTSDG 585
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
+ P N++I F +AF VL+ M K KP+V T+ L+K+ + K
Sbjct: 586 LKPSLLALNSLINAFGEDRRDAEAFAVLQYM-KENGVKPDVVTYTTLMKALIRVDK 640
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/388 (22%), Positives = 182/388 (46%), Gaps = 8/388 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQ--MRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWE 185
GY+ Y +++ L + ++D + L +E+ + + + + + ++ F+ +G
Sbjct: 198 GYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPS 257
Query: 186 DAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFI 244
A++ GL T T+ ++ L G+ A ++F EL+ S I P +N +
Sbjct: 258 KALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALL 317
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
G+ K + +A+ + EM+ G P +YS +I +Y + +L EM+A
Sbjct: 318 KGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQ 377
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
PN ++ +++ G++++ ++ ++MK +G KPD +F+N +I T G+ + + A+
Sbjct: 378 PNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTT 437
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
+ M G+ PD T+NT+I HG H A + E M + C P T++ ++ S
Sbjct: 438 FD-RMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMER-RGCLPCATTYNIMINSY 495
Query: 425 FKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
+ D+ + +LL M ++ L ++ T+T ++ ++ + A +EM + P
Sbjct: 496 GDQERWDD-MKRLLGKMKSQGILP-NVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKP 553
Query: 485 RYQTCRLILDEVKQKHMYDAAEKIEAVM 512
+++ Q+ + + A VM
Sbjct: 554 SSTMYNALINAYAQRGLSEQAVNAFRVM 581
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 144/342 (42%), Gaps = 58/342 (16%)
Query: 59 VDSPRLPDIDVIISKVHV-GSSEDEVFQSLKQDHVCNA-----------------IQPSH 100
V + L D + ++S++ G S DE SL D NA +QP+
Sbjct: 321 VKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNS 380
Query: 101 YLVNKLIHRFKD--DWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLE 158
++ ++L+ F+D +W+ + + S G + + Y +++D GK +D +
Sbjct: 381 FVFSRLLAGFRDRGEWQKTFQVLKEMKSI-GVKPDRQFYNVVIDTFGKFNCLDHAMTTFD 439
Query: 159 EM-SKG--------------------HIVTLNTIAKVMRR---------------FSGAG 182
M S+G HIV + RR +
Sbjct: 440 RMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQE 499
Query: 183 QWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFN 241
+W+D R ++ + G+ N T L+D K G+ A E+KS + P++ +N
Sbjct: 500 RWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYN 559
Query: 242 IFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ 301
I+ + + ++A + M G P +++ +++I ++ ++ + +L M+
Sbjct: 560 ALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKEN 619
Query: 302 GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSR 343
G P+VVTYTT+M L + F++ + E+M + G KPD +
Sbjct: 620 GVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRK 661
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 135/332 (40%), Gaps = 50/332 (15%)
Query: 220 ELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
+L + L K + P T+N I + N +++A I +M+ G ++YS +I
Sbjct: 153 KLYEAFLLSQKQTLTP--LTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVI 210
Query: 280 QSYCRQYNF-------------------------------------SKVYELLDEMQAQG 302
QS R SK +LL QA G
Sbjct: 211 QSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATG 270
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
T +++S LA SG EA + E+++ G KP +R +N L+ + +++A
Sbjct: 271 LSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAE 330
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLK 422
+ EM + GV+PD T++ +I + + G E A VL+EM + +PN F LL
Sbjct: 331 SMVS-EMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGD-VQPNSFVFSRLLA 388
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
G+ + Q+L +M + D Y +VI + N + A F M+ I
Sbjct: 389 GFRDRGEWQKTF-QVLKEM-KSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGI 446
Query: 483 TPRYQTCRLILD-------EVKQKHMYDAAEK 507
P T ++D + + M++A E+
Sbjct: 447 EPDRVTWNTLIDCHCKHGRHIVAEEMFEAMER 478
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 107/254 (42%), Gaps = 46/254 (18%)
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
C + YS +I + R K+YE Q Q P +TY ++ A++ D E+A+
Sbjct: 134 CFSYELLYSILIHALGRS---EKLYEAFLLSQKQTLTP--LTYNALIGACARNNDIEKAL 188
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY--VYQVEMPENGVAPDTSTFNTMI 385
+ KM+ G + D ++ +I +L R++++ + +Y+ E+ + + D N +I
Sbjct: 189 NLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYK-EIERDKLELDVQLVNDII 247
Query: 386 TMFSHHGHHEKAFHVL-----------------------------------EEMNKLEHC 410
F+ G KA +L EE+ +
Sbjct: 248 MGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQ-SGI 306
Query: 411 KPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWA 470
KP + ++ LLK KTG + S + + + K +S D TY+L+I A + E A
Sbjct: 307 KPRTRAYNALLKGYVKTGPLKDAESMVSE--MEKRGVSPDEHTYSLLIDAYVNAGRWESA 364
Query: 471 YLLFKEMIGHDITP 484
++ KEM D+ P
Sbjct: 365 RIVLKEMEAGDVQP 378
>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
Length = 442
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 108/421 (25%), Positives = 194/421 (46%), Gaps = 18/421 (4%)
Query: 96 IQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQM 153
+QP+ Y N LIH + + AL + C G Y ++++ K R Q
Sbjct: 3 VQPNAYTYNPLIHTLCERGQVRDALSVLDDM-LCRGCAPDVVTYNILLEATCKGRGYRQA 61
Query: 154 RALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDT 212
L++ M ++G T +M G G +DA+ L + G + +T N +L
Sbjct: 62 MELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKG 121
Query: 213 LCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPC 271
LC + A + E L+ PPN TFN+ I+ C+ + +A +++M HGC
Sbjct: 122 LCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTAN 181
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
+++Y+ II C Q N LL +M++ GC P++VTY T++ L + + +A + +
Sbjct: 182 IVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMD 241
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHH 391
M G PD+ FN LI L + + +A+ V++ +MP+ G P++ T++T+I+ +
Sbjct: 242 NMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFK-QMPDKGCTPNSITYSTIISGLAKA 300
Query: 392 GHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE----CLSQLLDDMVNKHHL 447
++A + EM H N + LL C T E + +L D ++ H +
Sbjct: 301 TKLDQALELFNEMG---HKGFNPDKIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTV 357
Query: 448 SLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEK 507
Y ++ GLCR K E+A + M+ P T ++++ + + + A +
Sbjct: 358 -----LYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARE 412
Query: 508 I 508
+
Sbjct: 413 L 413
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 99/237 (41%), Gaps = 44/237 (18%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y +++ L + R +D LL +M K IVT NT+ ++ A +W DA D
Sbjct: 185 YNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTL---LKGLCSAARWVDAEELMD 241
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKI 250
+ G + T N L+ LC++G + A VF ++ K C P N+ T++ I G K
Sbjct: 242 NMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTP-NSITYSTIISGLAKA 300
Query: 251 NRVD----------------------------------EAQWTIQEMKGHGCHPCVISYS 276
++D EA T+++++ G P + Y+
Sbjct: 301 TKLDQALELFNEMGHKGFNPDKIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYN 360
Query: 277 TIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
I+ CR +++ M + GC P+ +TY ++ LA G EA + K+
Sbjct: 361 AILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKL 417
>gi|449436637|ref|XP_004136099.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80880,
mitochondrial-like [Cucumis sativus]
gi|449509164|ref|XP_004163514.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80880,
mitochondrial-like [Cucumis sativus]
Length = 547
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 122/490 (24%), Positives = 225/490 (45%), Gaps = 26/490 (5%)
Query: 8 YLKQARIPLNPLTSRIRFHSSSENCSHIVSSSPIES------YCSDGARLDHHQVLCVDS 61
YL + RIP +P + + S + S+ P S + D R +++ +
Sbjct: 24 YLNRLRIPDSPFQAFHQTFSLHSFFARQFSALPSFSQKLGDPFLFDTGRFQNYRQSDACN 83
Query: 62 PRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIF 121
R ++ +V + SE E +L + V + LV I +DDWKS+L F
Sbjct: 84 ARFIEL---FKRVALLPSEVEAVAALDEFDVKADLD----LVYSAIWVLRDDWKSSLLAF 136
Query: 122 RWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGA 181
+W + EI +M+ +LG ++ +L+ E+ + ++ + ++ R++ A
Sbjct: 137 KWGEKVGAIDE--EICNLMIWVLGNHKKFSTAWSLIRELHGSLLNSMQAMLVMIDRYAYA 194
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFN 241
+ A++TF + F L + E ++LL++LCK G +E A K P +FN
Sbjct: 195 NEASKAIKTFHMMEKFRLTPDQEAFHVLLNSLCKYGNIEEAEEFMFVNKKLFPLGTESFN 254
Query: 242 IFIHGWCKIN-RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
I ++GWC + V EA+ +EM P SY+ +I + + N D+M+
Sbjct: 255 IILNGWCNVTVDVFEAKRIWREMSKCCILPDSTSYTHMISCFSKNGNLFDSLRFYDQMKK 314
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
+ P+V Y ++ L + F EA++I EK+K VG +PDS +N LI L A ++ E
Sbjct: 315 RDWIPSVEVYNSLAYVLTRENCFNEALKILEKIKEVGLRPDSTTYNSLISPLCEAGKLDE 374
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
A V + M E+ ++P T+++ I + +F +L+ M + + P TF +
Sbjct: 375 AKDVLTM-MTEDNISPTIETYHSFI----QAADSKMSFELLKRMRQ-DGLGPTEGTFLIM 428
Query: 421 LKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH 480
F+ + + L+ ++ + ++ + Y+++I GL + A L+ EMI H
Sbjct: 429 FNKSFELEEPEYALNVWVE--MKRYEVFPSCEHYSVLIQGLATCGHLKKARELYDEMILH 486
Query: 481 DIT--PRYQT 488
P+ +T
Sbjct: 487 GFIAHPKIKT 496
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 108/236 (45%), Gaps = 12/236 (5%)
Query: 277 TIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA---IRITEKM 333
+I Y SK + M+ P+ + +++ L K G+ EEA + + +K+
Sbjct: 186 VMIDRYAYANEASKAIKTFHMMEKFRLTPDQEAFHVLLNSLCKYGNIEEAEEFMFVNKKL 245
Query: 334 KIVGSKPDSRFFNCLIYTLGRAS-RVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
+G++ FN ++ + V EA +++ EM + + PD++++ MI+ FS +G
Sbjct: 246 FPLGTES----FNIILNGWCNVTVDVFEAKRIWR-EMSKCCILPDSTSYTHMISCFSKNG 300
Query: 393 HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
+ + ++M K + P+V+ ++ L + +E L L + + + L D T
Sbjct: 301 NLFDSLRFYDQMKKRDWI-PSVEVYNSLAYVLTRENCFNEALKIL--EKIKEVGLRPDST 357
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
TY +I LC A K + A + M +I+P +T + K ++ +++
Sbjct: 358 TYNSLISPLCEAGKLDEAKDVLTMMTEDNISPTIETYHSFIQAADSKMSFELLKRM 413
>gi|115436822|ref|NP_001043145.1| Os01g0505500 [Oryza sativa Japonica Group]
gi|56201654|dbj|BAD73118.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113532676|dbj|BAF05059.1| Os01g0505500 [Oryza sativa Japonica Group]
gi|125570544|gb|EAZ12059.1| hypothetical protein OsJ_01942 [Oryza sativa Japonica Group]
Length = 540
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 196/391 (50%), Gaps = 6/391 (1%)
Query: 99 SHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLE 158
S LV +++ + AL FRWA G+ +S+E + +++ LGK++Q + +L+E
Sbjct: 119 SPQLVAEVLKNLSNAGILALAFFRWAERQQGFRYSAEGFHNLIEALGKIKQFRLVWSLVE 178
Query: 159 EMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
M ++ +T ++RR++ A + ++AV TF+++ +FGL+ + N L+D L K +
Sbjct: 179 AMRCRSCLSKDTFKIIVRRYARARKVKEAVETFEKMSSFGLKTDLSDYNWLIDILSKSKQ 238
Query: 219 VELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYS 276
V+ A ++F E+ K P+ T+ + + GW + + QEM G P V++Y
Sbjct: 239 VKKAHAIFKEMKRKGRFIPDLKTYTVLMEGWGHEKDLLMLKAVYQEMLDAGIKPDVVAYG 298
Query: 277 TIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIV 336
+I ++C+ + ++ EM+ GC P+ Y +++ L +EA++ + K
Sbjct: 299 MLISAFCKSGKCDEAIKVFHEMEESGCMPSPHVYCMLINGLGSMERLDEALKYFQLSKES 358
Query: 337 GSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEK 396
G + N +I RA A + EM ++G+ P+T T++ ++ E+
Sbjct: 359 GFPMEVPTCNAVIGAYCRALEFHHAFKMVD-EMRKSGIGPNTRTYDIILNHLIKSEKIEE 417
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTL 456
A+++ + M + + C+P + T+ ++ + D L ++ M K L + ++
Sbjct: 418 AYNLFQRMER-DGCEPELNTYTMMVGMFCSNERVDMAL-KVWKQMKEKGVLPC-MHMFSA 474
Query: 457 VIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
+I+GLC N+ E A + F+EM+ I P Q
Sbjct: 475 LINGLCFENRLEEACVYFQEMLDKGIRPPGQ 505
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 124/267 (46%), Gaps = 15/267 (5%)
Query: 83 VFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWK--SALGIF---RWAGSCPGYEHSSEIY 137
+ +++ Q+ + I+P LI F K A+ +F +G P S +Y
Sbjct: 277 MLKAVYQEMLDAGIKPDVVAYGMLISAFCKSGKCDEAIKVFHEMEESGCMP----SPHVY 332
Query: 138 EMMVDILGKVRQMDQMRALLEEMSK--GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
M+++ LG + ++D+ + +SK G + + T V+ + A ++ A + DE+
Sbjct: 333 CMLINGLGSMERLDEALKYFQ-LSKESGFPMEVPTCNAVIGAYCRALEFHHAFKMVDEMR 391
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKINRV 253
G+ NT T +++L+ L K K+E A ++F +E C P +T+ + + +C RV
Sbjct: 392 KSGIGPNTRTYDIILNHLIKSEKIEEAYNLFQRMERDGC-EPELNTYTMMVGMFCSNERV 450
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
D A ++MK G PC+ +S +I C + + EM +G P ++ +
Sbjct: 451 DMALKVWKQMKEKGVLPCMHMFSALINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNL 510
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKP 340
L + G A +T++++++ P
Sbjct: 511 KEALVEGGRITLAQEVTQRLEMLRRTP 537
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 102/232 (43%), Gaps = 2/232 (0%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y M++ K + D+ + EM + G + + + ++ + ++A++ F
Sbjct: 297 YGMLISAFCKSGKCDEAIKVFHEMEESGCMPSPHVYCMLINGLGSMERLDEALKYFQLSK 356
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
G T N ++ C+ + A + E+ KS I PN T++I ++ K +++
Sbjct: 357 ESGFPMEVPTCNAVIGAYCRALEFHHAFKMVDEMRKSGIGPNTRTYDIILNHLIKSEKIE 416
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA Q M+ GC P + +Y+ ++ +C ++ +M+ +G P + ++ ++
Sbjct: 417 EAYNLFQRMERDGCEPELNTYTMMVGMFCSNERVDMALKVWKQMKEKGVLPCMHMFSALI 476
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
+ L EEA ++M G +P + F+ L L R+ A V Q
Sbjct: 477 NGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEALVEGGRITLAQEVTQ 528
>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
Length = 855
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/487 (24%), Positives = 213/487 (43%), Gaps = 77/487 (15%)
Query: 93 CNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSC---PGYEHSSEIYEMMV-DILGK 146
CN P+ L N L+H + + D+ A + +C PGY +Y + + I G+
Sbjct: 173 CN---PNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYV----VYNIFIGSICGQ 225
Query: 147 VRQ-----MDQMRALLEEMSKGHIVTLN--TIAKVMRRFSGAGQWEDAVRTFDELGTFGL 199
+ +D + EM + V LN +A R G G+++ A + E+ G
Sbjct: 226 EKLPSPDLLDLAEKIYGEMLAANCV-LNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGF 284
Query: 200 EKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQW 258
+T T + ++ LC KVE A +F E+K + P+ +T+ I I +CK +++AQW
Sbjct: 285 VPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQW 344
Query: 259 TIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLA 318
+EM+ GC P V++Y+ +I +Y + + ++ M GC PN VTY ++ L
Sbjct: 345 LFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLC 404
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRF---------------------------------- 344
K+G+ +A + K+ DS F
Sbjct: 405 KAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAH 464
Query: 345 -----------------FNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITM 387
++ LI +A ++ A V+ ++M + G P T+ ++I
Sbjct: 465 ELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF-LQMTKCGYLPSVHTYTSLIDR 523
Query: 388 FSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHL 447
G + A VL +M K + C PNV T+ ++ + G++++ L L ++ +
Sbjct: 524 MFKDGRLDLAMKVLSQMLK-DSCTPNVVTYTAMIDGLCRIGESEKALKLL--SLMEEKGC 580
Query: 448 SLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEK 507
S ++ TYT +I GL +A K + + LF +M +P Y T R++++ + + D A
Sbjct: 581 SPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARL 640
Query: 508 IEAVMKK 514
+ MK+
Sbjct: 641 LLGEMKQ 647
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/444 (23%), Positives = 185/444 (41%), Gaps = 68/444 (15%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
GY S Y +V +L Q+D + +EMS+ G + T+ G+W DA
Sbjct: 35 GYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADA 94
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIH 245
+ D + + +T ++ L + + A S + SCI PN T+ +
Sbjct: 95 L---DMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCI-PNVVTYRTLLS 150
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G+ K ++ + I M GC+P +++++ SYC + +++ Y+LL+ M GCPP
Sbjct: 151 GFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPP 210
Query: 306 NVVTYTTVMSY-----------------------------------------LAKSGDFE 324
V Y + L G F+
Sbjct: 211 GYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFD 270
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTM 384
+A ++ ++M G PD+ ++ +I L A++V++A ++Q EM GV PD T+ +
Sbjct: 271 KAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQ-EMKMVGVTPDVYTYTIL 329
Query: 385 ITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK 444
I F G E+A + EEM + C P V T+ L+ + K + + + + MV+
Sbjct: 330 IDSFCKAGLIEQAQWLFEEMRSV-GCSPTVVTYTALIHAYLKAKQVPQA-NDIFHRMVDA 387
Query: 445 HHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG----------------HDITPRYQT 488
D+ TY ++ GLC+A A+ ++ ++IG H + P T
Sbjct: 388 GCRPNDV-TYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVT 446
Query: 489 CRLILDEVKQKHMYDAAEKIEAVM 512
++D + + H D A ++ M
Sbjct: 447 YGALVDGLCKAHKVDHAHELLDAM 470
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 142/320 (44%), Gaps = 7/320 (2%)
Query: 191 FDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCK 249
D + + G E N + L+D CK GK++ A+ VFL++ C P+ HT+ I K
Sbjct: 467 LDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFK 526
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
R+D A + +M C P V++Y+ +I CR K +LL M+ +GC PNVVT
Sbjct: 527 DGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVT 586
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM 369
YT ++ L K+G + ++ + +M G P+ + LI L A + +A + EM
Sbjct: 587 YTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLG-EM 645
Query: 370 PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
+ + I FS + +LEEM + + + +L CF
Sbjct: 646 KQTYWPKYLQGYRCAIQGFSKS--FIASLGILEEME--SYGTVPIAPVYGMLIDCFSKAG 701
Query: 430 TDECLSQLLDDMVN-KHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
E +L +M+ + D Y +I LC A++ E A+ L+ EM P
Sbjct: 702 RLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSV 761
Query: 489 CRLILDEVKQKHMYDAAEKI 508
++ + + +D A ++
Sbjct: 762 FVCLIKGLVEVKKWDEALQL 781
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 138/342 (40%), Gaps = 60/342 (17%)
Query: 74 VHVGSSEDEVFQSLKQDH--------VCNAIQPSHYLVNKLIHRFKDDWK--SALGIFRW 123
V G+ D + ++ K DH + + +P+H + + LI F K SA +F
Sbjct: 445 VTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQ 504
Query: 124 AGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKG----HIVTLNTIAKVMRRFS 179
C GY S Y ++D + K ++D +L +M K ++VT + + R
Sbjct: 505 MTKC-GYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRI- 562
Query: 180 GAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNA 237
G+ E A++ + G N T L+D L K GK++L+ +F ++ K C PN
Sbjct: 563 --GESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGC-SPNY 619
Query: 238 HTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDE 297
T+ + I+ C +D+A+ + EMK + Y IQ + + +F +L+E
Sbjct: 620 VTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSK--SFIASLGILEE 677
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFE--------------------------------- 324
M++ G P Y ++ +K+G E
Sbjct: 678 MESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLA 737
Query: 325 ----EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
EA R+ +M G P+ F CLI L + EA+
Sbjct: 738 SQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEAL 779
>gi|125526112|gb|EAY74226.1| hypothetical protein OsI_02107 [Oryza sativa Indica Group]
Length = 540
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 196/391 (50%), Gaps = 6/391 (1%)
Query: 99 SHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLE 158
S LV +++ + AL FRWA G+ +S+E + +++ LGK++Q + +L+E
Sbjct: 119 SPQLVAEVLKNLSNAGILALAFFRWAERQQGFRYSAEGFHNLIEALGKIKQFRLVWSLVE 178
Query: 159 EMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
M ++ +T ++RR++ A + ++AV TF+++ +FGL+ + N L+D L K +
Sbjct: 179 AMRCRSCLSKDTFKIIVRRYARARKVKEAVETFEKMSSFGLKTDLSDYNWLIDILSKSKQ 238
Query: 219 VELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYS 276
V+ A ++F E+ K P+ T+ + + GW + + QEM G P V++Y
Sbjct: 239 VKKAHAIFKEMKRKGRFIPDLKTYTVLMEGWGHEKDLLMLKAVYQEMLDAGIKPDVVAYG 298
Query: 277 TIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIV 336
+I ++C+ + ++ EM+ GC P+ Y +++ L +EA++ + K
Sbjct: 299 MLISAFCKSGKCDEAIKVFHEMEESGCMPSPHVYCMLINGLGSMERLDEALKYFQLSKES 358
Query: 337 GSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEK 396
G + N +I RA A + EM ++G+ P+T T++ ++ E+
Sbjct: 359 GFPMEVPTCNAVIGAYCRALEFHHAFKMVD-EMRKSGIGPNTRTYDIILNHLIKSEKIEE 417
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTL 456
A+++ + M + + C+P + T+ ++ + D L ++ M K L + ++
Sbjct: 418 AYNLFQRMER-DGCEPELNTYTMMVGMFCSNERVDMAL-KVWKQMKEKGVLPC-MHMFSA 474
Query: 457 VIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
+I+GLC N+ E A + F+EM+ I P Q
Sbjct: 475 LINGLCFDNRLEEACVYFQEMLDKGIRPPGQ 505
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 123/267 (46%), Gaps = 15/267 (5%)
Query: 83 VFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWK--SALGIF---RWAGSCPGYEHSSEIY 137
+ +++ Q+ + I+P LI F K A+ +F +G P S +Y
Sbjct: 277 MLKAVYQEMLDAGIKPDVVAYGMLISAFCKSGKCDEAIKVFHEMEESGCMP----SPHVY 332
Query: 138 EMMVDILGKVRQMDQMRALLEEMSK--GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
M+++ LG + ++D+ + +SK G + + T V+ + A ++ A + DE+
Sbjct: 333 CMLINGLGSMERLDEALKYFQ-LSKESGFPMEVPTCNAVIGAYCRALEFHHAFKMVDEMR 391
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKINRV 253
G+ NT T +++L+ L K K+E A ++F +E C P +T+ + + +C RV
Sbjct: 392 KSGIGPNTRTYDIILNHLIKSEKIEEAYNLFQRMERDGC-EPELNTYTMMVGMFCSNERV 450
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
D A ++MK G PC+ +S +I C + EM +G P ++ +
Sbjct: 451 DMALKVWKQMKEKGVLPCMHMFSALINGLCFDNRLEEACVYFQEMLDKGIRPPGQLFSNL 510
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKP 340
L + G A +T++++++ P
Sbjct: 511 KEALVEGGRITLAQEVTQRLEMLRRTP 537
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 102/232 (43%), Gaps = 2/232 (0%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y M++ K + D+ + EM + G + + + ++ + ++A++ F
Sbjct: 297 YGMLISAFCKSGKCDEAIKVFHEMEESGCMPSPHVYCMLINGLGSMERLDEALKYFQLSK 356
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
G T N ++ C+ + A + E+ KS I PN T++I ++ K +++
Sbjct: 357 ESGFPMEVPTCNAVIGAYCRALEFHHAFKMVDEMRKSGIGPNTRTYDIILNHLIKSEKIE 416
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA Q M+ GC P + +Y+ ++ +C ++ +M+ +G P + ++ ++
Sbjct: 417 EAYNLFQRMERDGCEPELNTYTMMVGMFCSNERVDMALKVWKQMKEKGVLPCMHMFSALI 476
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
+ L EEA ++M G +P + F+ L L R+ A V Q
Sbjct: 477 NGLCFDNRLEEACVYFQEMLDKGIRPPGQLFSNLKEALVEGGRITLAQEVTQ 528
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/458 (26%), Positives = 197/458 (43%), Gaps = 56/458 (12%)
Query: 94 NAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGK-VRQM 150
+ +QP+ ++ D SAL + R + + IY ++D L K RQ
Sbjct: 206 DGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQT 265
Query: 151 DQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL---------------- 194
D E KG L T ++ F +G+W +A R E+
Sbjct: 266 DAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLI 325
Query: 195 ------GTF-------------GLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCI 233
G F G+ NT T N ++D K+ +++ A +F + K C
Sbjct: 326 NALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGC- 384
Query: 234 PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
P+ TF+I I G+C RVD+ + EM G I+Y+T+I +C+ N + +
Sbjct: 385 SPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALD 444
Query: 294 LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI-----TEKMKIVGS------KPDS 342
LL EM + G PNVVT T++ L +G ++A+ + KM + S +PD
Sbjct: 445 LLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDV 504
Query: 343 RFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLE 402
+ +N LI L + EA +Y+ EMP G+ PDT T+N++I ++A + +
Sbjct: 505 QTYNILICGLINEGKFSEAEELYE-EMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFD 563
Query: 403 EMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC 462
M + P+V TF L+ K G+ + L + + + + + TY +IHG C
Sbjct: 564 SMGS-KGFSPDVVTFTTLINGYCKVGRVGDGLEVFCE--MGRRGIVANAITYRTLIHGFC 620
Query: 463 RANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKH 500
+ A +F+EMI + P T R +L + K
Sbjct: 621 QVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKE 658
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 175/375 (46%), Gaps = 19/375 (5%)
Query: 155 ALLEEMSKGHI----VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLL 210
ALL+ M + + +T TI M + + +R +E+ ++ N + ++
Sbjct: 198 ALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSR--IKPNVVIYSAII 255
Query: 211 DTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCH 269
D L K+G+ A+++F E++ I PN T+N I+G+C R EAQ ++EM
Sbjct: 256 DGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMS 315
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI 329
P V+++S +I + ++ F + EL +EM +G PN +TY +++ +K + A R+
Sbjct: 316 PDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERM 375
Query: 330 TEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFS 389
M G PD F+ LI A RV + + + EM G+ +T T+ T+I F
Sbjct: 376 FYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLH-EMSRRGLVANTITYTTLIHGFC 434
Query: 390 HHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL---------LDD 440
G+ A +L+EM C PNV T + LL GK + L LD
Sbjct: 435 QLGNLNAALDLLQEMISSGVC-PNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDA 493
Query: 441 MVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQK 499
+ + D+ TY ++I GL K A L++EM + P T ++D + KQ
Sbjct: 494 SHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQS 553
Query: 500 HMYDAAEKIEAVMKK 514
+ +A + +++ K
Sbjct: 554 RLDEATQMFDSMGSK 568
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 157/364 (43%), Gaps = 43/364 (11%)
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHG 246
A+ TF ++ G + T + LL LC E +V A F ++ PN F ++G
Sbjct: 130 ALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQI---CKPNVIAFTTLMNG 186
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYN------------------- 287
C+ RV EA + M G P I+Y TI+ C+ +
Sbjct: 187 LCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKP 246
Query: 288 ----FSKVYE-------------LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRIT 330
+S + + L EMQ +G PN+ TY +++ SG + EA R+
Sbjct: 247 NVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLL 306
Query: 331 EKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSH 390
+M PD F+ LI L + + EA +Y EM G+ P+T T+N+MI FS
Sbjct: 307 REMFERKMSPDVVTFSVLINALVKEGKFFEAEELYN-EMLPRGIIPNTITYNSMIDGFSK 365
Query: 391 HGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLD 450
+ A + M + C P+V TF L+ + D+ + +LL +M ++ L +
Sbjct: 366 QNRLDAAERMFYLM-ATKGCSPDVITFSILIDGYCGAKRVDDGM-KLLHEM-SRRGLVAN 422
Query: 451 ITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEA 510
TYT +IHG C+ A L +EMI + P TC +LD + A ++
Sbjct: 423 TITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFK 482
Query: 511 VMKK 514
VM+K
Sbjct: 483 VMQK 486
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 165/364 (45%), Gaps = 19/364 (5%)
Query: 41 IESYCSDGARLDHHQVLCVDSPRLPDIDVIISKVHVGS--SEDEVFQS--LKQDHVCNAI 96
I +CS G + ++L R DV+ V + + E + F++ L + + I
Sbjct: 290 INGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGI 349
Query: 97 QPSHYLVNKLIHRF-KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRA 155
P+ N +I F K + A + + G + +++D +++D
Sbjct: 350 IPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMK 409
Query: 156 LLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLC 214
LL EMS+ G + T ++ F G A+ E+ + G+ N T N LLD LC
Sbjct: 410 LLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLC 469
Query: 215 KEGKVELARSVF-------LELKSCIP-----PNAHTFNIFIHGWCKINRVDEAQWTIQE 262
GK++ A +F ++L + P P+ T+NI I G + EA+ +E
Sbjct: 470 NNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEE 529
Query: 263 MKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGD 322
M G P I+Y+++I C+Q + ++ D M ++G P+VVT+TT+++ K G
Sbjct: 530 MPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGR 589
Query: 323 FEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFN 382
+ + + +M G ++ + LI+ + + A+ ++Q EM +GV PDT T
Sbjct: 590 VGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQ-EMISSGVYPDTITIR 648
Query: 383 TMIT 386
M+T
Sbjct: 649 NMLT 652
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 142/315 (45%), Gaps = 42/315 (13%)
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII------------- 279
IP N ++F I I +C +++ A T ++ G HP ++++ST++
Sbjct: 107 IPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEAL 166
Query: 280 ------------------QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSG 321
CR+ + LLD M G PN +TY T++ + K G
Sbjct: 167 HFFHQICKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMG 226
Query: 322 DFEEAIRITEKMKIVGS-KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTST 380
D A+ + KM+ V KP+ ++ +I L + R +A ++ EM E G++P+ T
Sbjct: 227 DTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFS-EMQEKGISPNLFT 285
Query: 381 FNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDD 440
+N MI F G +A +L EM + P+V TF L+ + K GK E +L ++
Sbjct: 286 YNCMINGFCSSGRWSEAQRLLREMFE-RKMSPDVVTFSVLINALVKEGKFFEA-EELYNE 343
Query: 441 MVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKH 500
M+ + + + TY +I G + N+ + A +F M +P T +++D
Sbjct: 344 MLPRGIIP-NTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDG----- 397
Query: 501 MYDAAEKIEAVMKKL 515
Y A++++ MK L
Sbjct: 398 -YCGAKRVDDGMKLL 411
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 77/148 (52%), Gaps = 1/148 (0%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTF 240
G++ +A ++E+ GL +T T N ++D LCK+ +++ A +F + S P+ TF
Sbjct: 518 GKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTF 577
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
I+G+CK+ RV + EM G I+Y T+I +C+ N + ++ EM +
Sbjct: 578 TTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMIS 637
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
G P+ +T +++ L + + A++
Sbjct: 638 SGVYPDTITIRNMLTGLWSKEELKRAVQ 665
>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/455 (23%), Positives = 202/455 (44%), Gaps = 67/455 (14%)
Query: 117 ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVM 175
AL F+ + ++H+ +E+M+ L Q+D ++ LL++M +G + + V+
Sbjct: 59 ALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVI 118
Query: 176 RRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIP 234
+ G E AV F + FG + + + N +LDTL E ++++ V+ ++K
Sbjct: 119 SVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFE 178
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQS------------- 281
PN T+N+ + CK N+VD A+ + EM GC P +SY+T+I S
Sbjct: 179 PNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL 238
Query: 282 -----------------YCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
C+++++ +EL+ EM +G PNV++Y+T+++ L SG E
Sbjct: 239 AERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIE 298
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTM 384
A +M G P+ + L+ +A+ ++ + G+ P+ +NT+
Sbjct: 299 LAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTL 358
Query: 385 ITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL---------- 434
+ F HG+ KA V M ++ C PN++T+ L+ K G D +
Sbjct: 359 VQGFCSHGNIVKAVSVFSHMEEI-GCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSG 417
Query: 435 -----------------------SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAY 471
++ L ++++K + + + T+ I GLC A + +WA
Sbjct: 418 CCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAE 477
Query: 472 LLFKEM-IGHDITPRYQTCRLILDEVKQKHMYDAA 505
+F++M H P T +LD + + + + A
Sbjct: 478 KVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEA 512
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 118/449 (26%), Positives = 208/449 (46%), Gaps = 30/449 (6%)
Query: 71 ISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCP 128
+S V SS EV + + +P + N LI+ + D+K A + R
Sbjct: 217 VSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVE-K 275
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK----GHIVTLNTIAK--VMR--RFSG 180
G + Y ++++L Q++ + L +M K +I TL+++ K +R F
Sbjct: 276 GISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDA 335
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAH 238
W +R F GL+ N N L+ C G + A SVF +E C PN
Sbjct: 336 LDLWNQMIRGF------GLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGC-SPNIR 388
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
T+ I+G+ K +D A + +M GC P V+ Y+ ++++ CR F + L++ M
Sbjct: 389 TYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIM 448
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIV-GSKPDSRFFNCLIYTLGRASR 357
+ C P+V T+ + L +G + A ++ +M+ P+ +N L+ L +A+R
Sbjct: 449 SKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANR 508
Query: 358 VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTF 417
++EA Y E+ GV +ST+NT++ + G A ++ +M ++ P+ T
Sbjct: 509 IEEA-YGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKM-MVDGKSPDEITM 566
Query: 418 HPLLKSCFKTGKTDECLSQLLDDM-VNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKE 476
+ ++ + K GK + +Q+LD + + D+ +YT VI GLCR+N E +L +
Sbjct: 567 NMIILAYCKQGKAERA-AQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLER 625
Query: 477 MIGHDITPRYQTCRL-----ILDEVKQKH 500
MI I P T + ILD++ + H
Sbjct: 626 MISAGIVPSIATWSVLINCFILDDIVRAH 654
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 182/401 (45%), Gaps = 39/401 (9%)
Query: 115 KSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAK 173
+ LG + G P IY ++ K + Q L EM K H + T+ T
Sbjct: 62 RKLLGRMKEMGCVP----DDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTN 117
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SC 232
++ A + DAV+ DE+ G N T N++++ LC+E K++ A+ + E+
Sbjct: 118 IVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRG 177
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
P+ T+N FI G CK +RVDEA+ + M P V+SY+T+I C+ +
Sbjct: 178 YFPDVVTYNSFIKGLCKCDRVDEARKFLARMP---VTPDVVSYTTVINGLCKSGDLDSAS 234
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
+LD M +GC P+VVTY++++ K G+ E A+ + + M +G +P+ +N L+ L
Sbjct: 235 RMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGAL 294
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
R + +A + VEM G PD ++N I +KA V + M + C P
Sbjct: 295 HRLGHIGKAEDML-VEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVE-RGCTP 352
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
N ++ L+ +DI YT+++ GLC+ + + A
Sbjct: 353 NASSYSMLI---------------------------VDILLYTVLLDGLCKGGRFDEACA 385
Query: 473 LFKEMIGHDIT-PRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
LF +++ I P ++LD ++ D A +I M
Sbjct: 386 LFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQM 426
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 169/370 (45%), Gaps = 9/370 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
GYEH+ Y ++ L + + D+ A+ +EM K T A ++R + Q E A
Sbjct: 2 GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHG 246
+ + G + N L+ K A E+ K+ P T+ + G
Sbjct: 62 RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
CK R +A + EM+ GC P + +Y+ I++ C + + ++L+EM +G P+
Sbjct: 122 LCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPD 181
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
VVTY + + L K +EA + +M + PD + +I L ++ + A +
Sbjct: 182 VVTYNSFIKGLCKCDRVDEARKFLARMPVT---PDVVSYTTVINGLCKSGDLDSASRMLD 238
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
M G PD T++++I F G E+A +L+ M KL C+PN+ ++ LL + +
Sbjct: 239 -HMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKL-GCRPNMVAYNSLLGALHR 296
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
G + L++ + + + D+ +Y I GLC+A + + A +F M+ TP
Sbjct: 297 LGHIGKAEDMLVE--MERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNA 354
Query: 487 QTCRLILDEV 496
+ +++ ++
Sbjct: 355 SSYSMLIVDI 364
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 101/207 (48%), Gaps = 4/207 (1%)
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
NV TY ++ L + ++A + ++M +PD+ F L+ L R++++++A +
Sbjct: 6 NVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLL 65
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
M E G PD + +N +I+ +S +AF L EM K HC P V T+ ++
Sbjct: 66 G-RMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVK-NHCLPTVVTYTNIVDGLC 123
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
K +T + + +LLD+M +K S +I TY +++ GLC K + A + +EM P
Sbjct: 124 KAERTRDAV-KLLDEMRDKG-CSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPD 181
Query: 486 YQTCRLILDEVKQKHMYDAAEKIEAVM 512
T + + + D A K A M
Sbjct: 182 VVTYNSFIKGLCKCDRVDEARKFLARM 208
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 104/235 (44%), Gaps = 18/235 (7%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGH-----------IVTLNTIAKVMRR 177
G+ Y +D L K ++ + +A+ + M + IV + ++
Sbjct: 314 GFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDG 373
Query: 178 FSGAGQWEDAVRTFDE-LGTFGLEKNTETMNLLLDTLCKEGKVELARSV---FLELKSCI 233
G++++A F + L E + N++LD+ CK +++ A + LE C
Sbjct: 374 LCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCC- 432
Query: 234 PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
N T+NI +HG C +R+ +A+ + M G P ++Y T++ + C+ + E
Sbjct: 433 --NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALE 490
Query: 294 LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
L +E GC P+VVTY+ +++ L EEA + K+ PD + L
Sbjct: 491 LFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVPDDKTLGLL 545
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 122/299 (40%), Gaps = 56/299 (18%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK----GHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++D K ++++ LL+ M K ++V N++ + R G+ ED +
Sbjct: 252 YSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLV--- 308
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFI------ 244
E+ G + + N +D LCK +V+ A++VF + + C P NA ++++ I
Sbjct: 309 EMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTP-NASSYSMLIVDILLY 367
Query: 245 ----HGWCKINRVDEAQWTIQEMKGHG-CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
G CK R DEA ++ C P V Y+ ++ S+C++ K ++ +M
Sbjct: 368 TVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQML 427
Query: 300 AQGC----------------------------------PPNVVTYTTVMSYLAKSGDFEE 325
+ C P+ VTY T++ + K G
Sbjct: 428 EKNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAA 487
Query: 326 AIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTM 384
A+ + E+ G PD ++ LI L + +EA Y+ ++ E PD T +
Sbjct: 488 ALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEA-YLLFTKLVERRWVPDDKTLGLL 545
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 125/464 (26%), Positives = 212/464 (45%), Gaps = 54/464 (11%)
Query: 82 EVFQSLKQDHVCNAIQPSHYLVNKLI--HRFKDDWKSALGIFRWAGSCPGYEHSSEIYEM 139
E F ++K+ V I+ + L++ + +R + W +FR + S + +
Sbjct: 172 ECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLR-----IKSSVYTFNI 226
Query: 140 MVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIA----------------KVMRR-- 177
M+++L K ++ + + + M K +IVT NTI M+R
Sbjct: 227 MINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQK 286
Query: 178 -----------FSG---AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELAR 223
SG G+ E+A + F+E+ GL + N L+D C +G +++A
Sbjct: 287 IEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMAS 346
Query: 224 SVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSY 282
+ E LK I P T+N IH R DEA+ I+E++ G P I+Y+ +I Y
Sbjct: 347 AYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGY 406
Query: 283 CRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDS 342
CR N K + L DEM A G P TYT+++ L+K +EA + +K+ G PD+
Sbjct: 407 CRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDA 466
Query: 343 RFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLE 402
FN LI S V+ A + + +M V PD TFNT++ G E+A + +
Sbjct: 467 IMFNALIDGHCSNSNVKGAFELLK-DMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFD 525
Query: 403 EMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL---SQLLDDMVNKHHLSLDITTYTLVIH 459
EM K KP+ +F+ L+ + G + +++LD N + TY ++
Sbjct: 526 EM-KRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNP-----TVLTYNALVQ 579
Query: 460 GLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYD 503
GLC+ + + A L KEM+ +TP T +++ + + ++ D
Sbjct: 580 GLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPD 623
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 57/116 (49%), Gaps = 8/116 (6%)
Query: 149 QMDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTE 204
++++ R L +EM + I ++ NT+ + +S G +DA R +E+ G
Sbjct: 516 KVEEARELFDEMKRRGIKPDHISFNTL---ISGYSRRGDIKDAFRVRNEMLDTGFNPTVL 572
Query: 205 TMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWT 259
T N L+ LCK + +LA + E+ S + P+ T+ I G K+N DE + T
Sbjct: 573 TYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDENKNT 628
>gi|356512664|ref|XP_003525037.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74750-like [Glycine max]
Length = 873
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 167/329 (50%), Gaps = 11/329 (3%)
Query: 101 YLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM 160
Y N+++ + +D ALG F W PG+ H Y MV ILG+ R+ D + LLE+M
Sbjct: 345 YQANQILKQLQDP-SVALGFFDWLRRQPGFRHDGHTYTTMVGILGRARRFDSISKLLEQM 403
Query: 161 SKG----HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKE 216
K ++VT N +++ + A ++A+ F+E+ G E + T L+D K
Sbjct: 404 VKDGCQPNVVTYN---RLIHCYGCANYLKEALNVFNEMQEVGCEPDRVTYCTLIDIHAKA 460
Query: 217 GKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISY 275
G +++A S++ ++ + + P+ T+++ I+ K + A W EM HGC P +++Y
Sbjct: 461 GFIDVAMSMYKRMQEAGLSPDTFTYSVIINCLGKAGNLAAAHWLFCEMVEHGCVPNLVTY 520
Query: 276 STIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKI 335
+ +I + N+ +L +MQ G P+ VTY+ VM L G EEA + +M+
Sbjct: 521 NIMIALQAKARNYEMALKLYHDMQNAGFQPDKVTYSIVMEALGHCGYLEEAESVFVEMQQ 580
Query: 336 VGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHE 395
PD + L+ G+A V++A YQ M G+ P+ T N++++ F
Sbjct: 581 KNWVPDEPVYGLLVDLWGKAGNVEKASEWYQA-MLNAGLLPNVPTCNSLLSAFLRLHRLP 639
Query: 396 KAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
A+++++ M L +P++QT+ LL C
Sbjct: 640 DAYNLVQSMVALG-LRPSLQTYTLLLSCC 667
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 101/212 (47%), Gaps = 4/212 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
G + Y ++++ LGK + L EM + G + L T ++ + A +E A
Sbjct: 477 GLSPDTFTYSVIINCLGKAGNLAAAHWLFCEMVEHGCVPNLVTYNIMIALQAKARNYEMA 536
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIH 245
++ + ++ G + + T +++++ L G +E A SVF+E+ K+ +P + + + +
Sbjct: 537 LKLYHDMQNAGFQPDKVTYSIVMEALGHCGYLEEAESVFVEMQQKNWVP-DEPVYGLLVD 595
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
W K V++A Q M G P V + ++++ ++ R + Y L+ M A G P
Sbjct: 596 LWGKAGNVEKASEWYQAMLNAGLLPNVPTCNSLLSAFLRLHRLPDAYNLVQSMVALGLRP 655
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
++ TYT ++S ++ + E M + G
Sbjct: 656 SLQTYTLLLSCCTEAQPAHDMGFFCELMAVTG 687
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 84/172 (48%), Gaps = 4/172 (2%)
Query: 337 GSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEK 396
G + D + ++ LGRA R + + +M ++G P+ T+N +I + + ++
Sbjct: 372 GFRHDGHTYTTMVGILGRARRFDSISKLLE-QMVKDGCQPNVVTYNRLIHCYGCANYLKE 430
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTL 456
A +V EM ++ C+P+ T+ L+ K G D +S + + + LS D TY++
Sbjct: 431 ALNVFNEMQEVG-CEPDRVTYCTLIDIHAKAGFIDVAMS--MYKRMQEAGLSPDTFTYSV 487
Query: 457 VIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+I+ L +A A+ LF EM+ H P T +++ + Y+ A K+
Sbjct: 488 IINCLGKAGNLAAAHWLFCEMVEHGCVPNLVTYNIMIALQAKARNYEMALKL 539
>gi|224117122|ref|XP_002317482.1| predicted protein [Populus trichocarpa]
gi|222860547|gb|EEE98094.1| predicted protein [Populus trichocarpa]
Length = 433
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/408 (28%), Positives = 195/408 (47%), Gaps = 11/408 (2%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS 161
LV K++ R + DWK A F W SS +Y ++DILG++R+ +++ +L+EMS
Sbjct: 5 LVLKVLKRHRSDWKPAYIFFNWVSKEGTISLSSCVYNEILDILGRMRRFEELTLVLDEMS 64
Query: 162 KGH-IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVE 220
K V +T ++ R++GA E+A+ F++ GLE + + LL LC+ V+
Sbjct: 65 KREGFVDEDTYRVLVNRYAGAHMVEEAIGAFNKRRELGLELDLVSFQKLLMYLCRYKHVD 124
Query: 221 LARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQ 280
+A ++ + T NI ++GWC + V EA+ +++ C P V +Y T I+
Sbjct: 125 VAETLLHSKGHEFGVDIKTMNIVLNGWCVLGNVREAKRFWKDIIASKCKPDVFTYGTFIK 184
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
+ + +L + M C P+VV V+ L EA+ + E MK G P
Sbjct: 185 ALTNKGKLGTAMKLYEAMWKMQCKPDVVICNCVIDALCFKKRVPEALAVFEGMKERGCIP 244
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPE--NGVAPDTSTFNTMITMFSHHGHHEKAF 398
+ +N LI + + R+ E VY EM E PD TFN ++ E+
Sbjct: 245 NVATYNSLIKHMCKIGRM-EKVYELLDEMQEKKGSCMPDEITFNYLLKSLK---KPEEVA 300
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
VLE M K+ CK N T + LLK ++E + ++M K+ L LD +YT++I
Sbjct: 301 GVLERM-KINGCKMNNDTCNLLLK-LHADWDSEEKVRYTWEEM-EKNGLGLDRRSYTIMI 357
Query: 459 HGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAE 506
H L + E A F EM + P +T +++ + + + +A E
Sbjct: 358 HWLYDKGRVEDALRYFGEMENKGMVPEPRT-KILCNSMNTRKQKEAEE 404
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 172/327 (52%), Gaps = 6/327 (1%)
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIH 245
A + GL+ N T + LL+ L + K+ A +F E+ K P+ T++ I+
Sbjct: 31 AFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIIN 90
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G CK+ A +++M+ GC P V+ YSTII S C+ ++ E L EM +G P
Sbjct: 91 GLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISP 150
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
NVVTY++++ G EA + ++M PD+ FN L+ L + + EA V+
Sbjct: 151 NVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVF 210
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
+ M E GV P+ +T+N ++ + ++A + M + + C P+V++++ L+K
Sbjct: 211 ET-MIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVR-KGCAPSVRSYNILIKGHC 268
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
K+G+ DE LL +M +K L+ D TY+ ++ G C+ + + A L +EM + + P
Sbjct: 269 KSGRIDEA-KGLLAEMSHK-ALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPD 326
Query: 486 YQTCRLILDEV-KQKHMYDAAEKIEAV 511
T ++LD + KQ H+ +A E ++A+
Sbjct: 327 LMTYSIVLDGLCKQGHLDEAFELLKAM 353
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 177/361 (49%), Gaps = 6/361 (1%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
+Y ++D L K + + + L EM ++G + T + ++ F G+ +A F ++
Sbjct: 119 VYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQM 178
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRV 253
+ +T T N+L+D L KEG + A+ VF ++ + PN +T+N + G+C +++
Sbjct: 179 VERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQM 238
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
DEAQ M GC P V SY+ +I+ +C+ + LL EM + P+ VTY+T+
Sbjct: 239 DEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTL 298
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
M + G ++A ++ E+M+ G PD ++ ++ L + + EA + + M E+
Sbjct: 299 MKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKA-MQESK 357
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
+ P+ + +I + G E A + + ++ +P+V T+ ++ K G ++E
Sbjct: 358 IEPNIFIYTILIQGMCNFGKLEAARELFSNL-FVKGIQPDVVTYTVMISGLLKGGLSNEA 416
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
+L DM H + TY ++I G R A L +EM+G + T +++
Sbjct: 417 -CELFRDMA-VHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQMLS 474
Query: 494 D 494
D
Sbjct: 475 D 475
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 154/317 (48%), Gaps = 7/317 (2%)
Query: 170 TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--L 227
T + ++ S + DAV+ FDE+ G E + T + +++ LCK G +A + +
Sbjct: 49 TFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKM 108
Query: 228 ELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYN 287
E K C PN ++ I CK + EA + EM G P V++YS+I+ +C
Sbjct: 109 EEKGC-KPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGR 167
Query: 288 FSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNC 347
++ L +M + P+ VT+ ++ L+K G EA + E M G +P+ +N
Sbjct: 168 SNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNA 227
Query: 348 LIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKL 407
L+ S++ EA ++ + M G AP ++N +I G ++A +L EM+
Sbjct: 228 LMDGYCSQSQMDEAQKLFNI-MVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSH- 285
Query: 408 EHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKC 467
+ P+ T+ L+K + G+ + +LL++M + L D+ TY++V+ GLC+
Sbjct: 286 KALTPDTVTYSTLMKGFCQDGRPQDA-QKLLEEM-RSYGLLPDLMTYSIVLDGLCKQGHL 343
Query: 468 EWAYLLFKEMIGHDITP 484
+ A+ L K M I P
Sbjct: 344 DEAFELLKAMQESKIEP 360
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 163/361 (45%), Gaps = 5/361 (1%)
Query: 146 KVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTET 205
K + +D ++ E + G+ + T + ++ G A++ ++ G + N
Sbjct: 60 KAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVV 119
Query: 206 MNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
+ ++D+LCK+ + A E+ I PN T++ +HG+C + R +EA ++M
Sbjct: 120 YSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMV 179
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
P ++++ ++ ++ + + + M +G PNV TY +M +
Sbjct: 180 ERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMD 239
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTM 384
EA ++ M G P R +N LI ++ R+ EA + EM + PDT T++T+
Sbjct: 240 EAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLL-AEMSHKALTPDTVTYSTL 298
Query: 385 ITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK 444
+ F G + A +LEEM P++ T+ +L K G DE +LL M +
Sbjct: 299 MKGFCQDGRPQDAQKLLEEMRSY-GLLPDLMTYSIVLDGLCKQGHLDEAF-ELLKAM-QE 355
Query: 445 HHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDA 504
+ +I YT++I G+C K E A LF + I P T +++ + + + +
Sbjct: 356 SKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNE 415
Query: 505 A 505
A
Sbjct: 416 A 416
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 115/248 (46%), Gaps = 6/248 (2%)
Query: 269 HPCVISYSTIIQSYCRQYN--FSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
P V + + +I +C + F + +L M G PN VT++T+++ L+ +A
Sbjct: 7 RPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDA 66
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
+++ ++M +G +PD ++ +I L + A+ + + +M E G P+ ++T+I
Sbjct: 67 VKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLK-KMEEKGCKPNVVVYSTIID 125
Query: 387 MFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHH 446
+A L EM PNV T+ +L G+++E S L MV ++
Sbjct: 126 SLCKDKLITEAMEFLSEMVN-RGISPNVVTYSSILHGFCNLGRSNEATS-LFKQMVERNV 183
Query: 447 LSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAE 506
+ D T+ +++ GL + A +F+ MI + P T ++D + D A+
Sbjct: 184 MP-DTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQ 242
Query: 507 KIEAVMKK 514
K+ +M +
Sbjct: 243 KLFNIMVR 250
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 68/149 (45%), Gaps = 6/149 (4%)
Query: 369 MPENGVAPDTSTFNTMITMFSH--HGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
M + + PD T +I F H H H AF VL M KL +PN TF LL
Sbjct: 1 MDLSNIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKL-GLQPNHVTFSTLLNGLSS 59
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
K + + +L D+MV K D+ TY+ +I+GLC+ A L K+M P
Sbjct: 60 KAKIIDAV-KLFDEMV-KMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNV 117
Query: 487 QTCRLILDEV-KQKHMYDAAEKIEAVMKK 514
I+D + K K + +A E + ++ +
Sbjct: 118 VVYSTIIDSLCKDKLITEAMEFLSEMVNR 146
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 184/352 (52%), Gaps = 6/352 (1%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
+Y ++D + KV+ +++ L EM SKG + T + ++ F G+ DA+ F+++
Sbjct: 227 MYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKM 286
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRV 253
++ + T N+L++ CK+GK++ ++VF + +K I PN T+N + G+C + V
Sbjct: 287 ILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEV 346
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
++A+ M G +P + SYS +I +C+ F + L EM + P+VVTY+++
Sbjct: 347 NKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSL 406
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
+ L+KSG A+++ ++M G P R +N ++ L + +V +A+ + ++ + G
Sbjct: 407 IDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALL-TKLKDKG 465
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
+ P+ T++ +I G E A V E + H NV T+ +++ G +E
Sbjct: 466 IQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGH-NLNVDTYTIMIQGFCVEGLFNEA 524
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
L+ LL M + + D TY ++I L + ++ + A L +EMI + PR
Sbjct: 525 LA-LLSKMEDNGCIP-DAKTYEIIILSLFKKDENDMAEKLLREMIARGVRPR 574
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 159/332 (47%), Gaps = 11/332 (3%)
Query: 178 FSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNA 237
F G A F ++ G +T T L+ LC +G+++ A FL +
Sbjct: 130 FCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQA---FLFHDKVVALGF 186
Query: 238 H----TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
H ++ IHG CK+ A +Q + G+ P V+ Y+TII S C+ ++ ++
Sbjct: 187 HFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFD 246
Query: 294 LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLG 353
L EM ++G P+VVTY+ ++S G +AI + KM + KPD FN L+
Sbjct: 247 LFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFC 306
Query: 354 RASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPN 413
+ +++E V+ + M + G+ P+ T+N+++ + KA + M + P+
Sbjct: 307 KDGKMKEGKTVFDMMMKQ-GIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQ-GGVNPD 364
Query: 414 VQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLL 473
+Q++ ++ K K DE ++ L +M K+ + D+ TY+ +I GL ++ + +A L
Sbjct: 365 IQSYSIMINGFCKIKKFDEAMN-LFKEMHRKNIIP-DVVTYSSLIDGLSKSGRISYALQL 422
Query: 474 FKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
+M + P +T ILD + + H D A
Sbjct: 423 VDQMHDRGVPPTIRTYNSILDALCKIHQVDKA 454
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 180/367 (49%), Gaps = 9/367 (2%)
Query: 144 LGKVRQ-MDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKN 202
+G+ R +D ++ + + + ++V NTI M + + A F E+ + G+ +
Sbjct: 203 VGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNE---AFDLFSEMISKGISPD 259
Query: 203 TETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQ 261
T + L+ C GK+ A +F ++ I P+ +TFNI ++ +CK ++ E +
Sbjct: 260 VVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFD 319
Query: 262 EMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSG 321
M G P ++Y++++ YC +K + + M G P++ +Y+ +++ K
Sbjct: 320 MMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIK 379
Query: 322 DFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTF 381
F+EA+ + ++M PD ++ LI L ++ R+ A+ + +M + GV P T+
Sbjct: 380 KFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVD-QMHDRGVPPTIRTY 438
Query: 382 NTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDM 441
N+++ +KA +L ++ K + +PN+ T+ L+K ++GK ++ +
Sbjct: 439 NSILDALCKIHQVDKAIALLTKL-KDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLL 497
Query: 442 VNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHM 501
V H+L++D TYT++I G C A L +M + P +T +I+ + +K
Sbjct: 498 VKGHNLNVD--TYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDE 555
Query: 502 YDAAEKI 508
D AEK+
Sbjct: 556 NDMAEKL 562
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 156/334 (46%), Gaps = 15/334 (4%)
Query: 178 FSGAGQWEDAVRTFDELGTFGLEKNTET----MNLLLDTLCKEGKVE--LARSVFLELKS 231
F +DAV F+ L L +NT N +L +L K L S +E +
Sbjct: 60 FHSNNDVDDAVSLFNRL----LRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRG 115
Query: 232 CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKV 291
I PN NI I+ +C++ + A ++ G P I+++T+I+ C + +
Sbjct: 116 -IKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQA 174
Query: 292 YELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYT 351
+ D++ A G + ++Y T++ L K G+ A+ + +++ +P+ +N +I +
Sbjct: 175 FLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDS 234
Query: 352 LGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCK 411
+ + V EA ++ EM G++PD T++ +I+ F G A + +M LE+ K
Sbjct: 235 MCKVKLVNEAFDLFS-EMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKM-ILENIK 292
Query: 412 PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAY 471
P+V TF+ L+ + K GK E + + DM+ K + + TY ++ G C + A
Sbjct: 293 PDVYTFNILVNAFCKDGKMKE--GKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAK 350
Query: 472 LLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
+F M + P Q+ ++++ + +D A
Sbjct: 351 SIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEA 384
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 127/253 (50%), Gaps = 11/253 (4%)
Query: 95 AIQPSHYLVNKLIHRF-----KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQ 149
I+P+ N L+ + + KS G P + Y +M++ K+++
Sbjct: 325 GIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQS----YSIMINGFCKIKK 380
Query: 150 MDQMRALLEEMSKGHIVT-LNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNL 208
D+ L +EM + +I+ + T + ++ S +G+ A++ D++ G+ T N
Sbjct: 381 FDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNS 440
Query: 209 LLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG 267
+LD LCK +V+ A ++ +LK I PN +T++I I G C+ ++++A+ + + G
Sbjct: 441 ILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKG 500
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
+ V +Y+ +IQ +C + F++ LL +M+ GC P+ TY ++ L K + + A
Sbjct: 501 HNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAE 560
Query: 328 RITEKMKIVGSKP 340
++ +M G +P
Sbjct: 561 KLLREMIARGVRP 573
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 120/265 (45%), Gaps = 5/265 (1%)
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
N VD+A + P ++ I+ S + ++ V L +M+ +G PN+V
Sbjct: 64 NDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNC 123
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
+++ + G A + K+ +G PD+ F LI L ++Q+A +++ ++
Sbjct: 124 NILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQA-FLFHDKVV 182
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKT 430
G D ++ T+I G A +L+ ++ +PNV ++ ++ S K
Sbjct: 183 ALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDG-NLVQPNVVMYNTIIDSMCKVKLV 241
Query: 431 DECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCR 490
+E L +M++K +S D+ TY+ +I G C K A LF +MI +I P T
Sbjct: 242 NEAF-DLFSEMISK-GISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFN 299
Query: 491 LILDEV-KQKHMYDAAEKIEAVMKK 514
++++ K M + + +MK+
Sbjct: 300 ILVNAFCKDGKMKEGKTVFDMMMKQ 324
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 106/234 (45%), Gaps = 23/234 (9%)
Query: 83 VFQSLKQDHVCNAIQPSHYLVNKL--IHRFKDDWKSALGIFRWAGSCPGYEHSSEI---- 136
+F ++ Q V IQ ++N I +F + A+ +F+ H I
Sbjct: 352 IFNTMAQGGVNPDIQSYSIMINGFCKIKKFDE----AMNLFKEM-------HRKNIIPDV 400
Query: 137 --YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDE 193
Y ++D L K ++ L+++M +G T+ T ++ Q + A+ +
Sbjct: 401 VTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTK 460
Query: 194 LGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKIN 251
L G++ N T ++L+ LC+ GK+E AR VF L +K N T+ I I G+C
Sbjct: 461 LKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGH-NLNVDTYTIMIQGFCVEG 519
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
+EA + +M+ +GC P +Y II S ++ +LL EM A+G P
Sbjct: 520 LFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRP 573
>gi|225457536|ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial [Vitis vinifera]
gi|297745544|emb|CBI40709.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 189/383 (49%), Gaps = 20/383 (5%)
Query: 61 SPRLPDIDVIISKV-HVGSSEDE--VFQSLKQDHVCNAIQPSHYLVNKLIHRFKD----- 112
SP+ + +I+ + + G +E+ +F+ LK+ + P N L+ +
Sbjct: 288 SPKTATLVAVITALGNAGRTEEAEAIFEELKE----GGLMPRTRAYNALLKGYVKTGSLK 343
Query: 113 DWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTI- 171
D +S + +G P EH+ Y +++D + + R +L+EM + + +
Sbjct: 344 DAESIVSEMERSGFSPD-EHT---YSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVF 399
Query: 172 AKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK- 230
++++ + G+W+ + + E+ G+ + N+++DT K ++ A + F ++
Sbjct: 400 SRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRM 459
Query: 231 SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSK 290
+ P+A T+N I CK ++A+ + M+ GC PC +Y+ +I S+ Q +
Sbjct: 460 EGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWED 519
Query: 291 VYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIY 350
V LL +MQ+QG NVVTYTT++ +SG F++AI E MK VG KP S +N LI
Sbjct: 520 VKTLLGKMQSQGLLANVVTYTTLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALIN 579
Query: 351 TLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHC 410
+ ++A+ ++V M +G+ P N++I F +AF VL+ M K
Sbjct: 580 AYAQRGLSEQAINAFRV-MRADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQYM-KENDL 637
Query: 411 KPNVQTFHPLLKSCFKTGKTDEC 433
KP+V T+ L+K+ + K D+
Sbjct: 638 KPDVVTYTTLMKALIRVEKFDKV 660
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 157/337 (46%), Gaps = 5/337 (1%)
Query: 178 FSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPN 236
F+ +G A+ + GL T T+ ++ L G+ E A ++F ELK + P
Sbjct: 266 FAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPR 325
Query: 237 AHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLD 296
+N + G+ K + +A+ + EM+ G P +YS +I +Y + +L
Sbjct: 326 TRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLK 385
Query: 297 EMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRAS 356
EM+A G PN ++ +++ G ++++ ++ +M+ G PD F+N +I T G+ +
Sbjct: 386 EMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCN 445
Query: 357 RVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQT 416
+ A+ + M GV PD T+NT+I GHH KA + E M + C P T
Sbjct: 446 CLDHALATFD-RMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQE-SGCSPCTTT 503
Query: 417 FHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKE 476
++ ++ S F + E + LL M ++ L+ ++ TYT ++ ++ + + A +
Sbjct: 504 YNIMINS-FGEQERWEDVKTLLGKMQSQGLLA-NVVTYTTLVDIYGQSGRFKDAIECLEV 561
Query: 477 MIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
M + P +++ Q+ + + A VM+
Sbjct: 562 MKSVGLKPSSTMYNALINAYAQRGLSEQAINAFRVMR 598
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/342 (21%), Positives = 139/342 (40%), Gaps = 58/342 (16%)
Query: 59 VDSPRLPDIDVIISKV-HVGSSEDEVFQSLKQDHVCNA-----------------IQPSH 100
V + L D + I+S++ G S DE SL D NA ++P+
Sbjct: 337 VKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNS 396
Query: 101 YLVNKLIHRFKD--DWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLE 158
Y+ ++++ ++D W+ + + R + G Y +M+D GK +D A +
Sbjct: 397 YVFSRILASYRDRGKWQKSFQVLREMRNS-GVSPDRHFYNVMIDTFGKCNCLDHALATFD 455
Query: 159 EMSKGHI----VTLNTIAK--------------------------------VMRRFSGAG 182
M + VT NT+ ++ F
Sbjct: 456 RMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQE 515
Query: 183 QWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFN 241
+WED ++ + GL N T L+D + G+ + A +KS + P++ +N
Sbjct: 516 RWEDVKTLLGKMQSQGLLANVVTYTTLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYN 575
Query: 242 IFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ 301
I+ + + ++A + M+ G P V+ +++I ++ ++ + +L M+
Sbjct: 576 ALINAYAQRGLSEQAINAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKEN 635
Query: 302 GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSR 343
P+VVTYTT+M L + F++ + E+M + G PD +
Sbjct: 636 DLKPDVVTYTTLMKALIRVEKFDKVPAVYEEMTLSGCTPDRK 677
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/390 (19%), Positives = 166/390 (42%), Gaps = 14/390 (3%)
Query: 127 CPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWED 186
C YE +Y +++ LG+ ++ + A L +S+ +T T ++ + E
Sbjct: 150 CFSYEL---LYSILIHALGRSEKLYE--AFL--LSQRQTLTPLTYNALIGACARNDDLEK 202
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVE--LARSVFLELKS-CIPPNAHTFNIF 243
A+ + G + + ++ +L + K + + + ++ E++S I + N
Sbjct: 203 ALNLMSRMRRDGFPSDFVNYSFIIQSLTRTNKSDSSMLQKIYAEIESDKIELDGQLLNDI 262
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
I G+ K V+ A + ++G+G P + +I + + + +E++ G
Sbjct: 263 IVGFAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGL 322
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
P Y ++ K+G ++A I +M+ G PD ++ LI A R + A
Sbjct: 323 MPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARI 382
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
V + EM +GV P++ F+ ++ + G +K+F VL EM P+ ++ ++ +
Sbjct: 383 VLK-EMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRN-SGVSPDRHFYNVMIDT 440
Query: 424 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
K D L+ D + + D T+ +I C++ A LF+ M +
Sbjct: 441 FGKCNCLDHALATF--DRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCS 498
Query: 484 PRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
P T ++++ ++ ++ + + M+
Sbjct: 499 PCTTTYNIMINSFGEQERWEDVKTLLGKMQ 528
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 166/317 (52%), Gaps = 6/317 (1%)
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDE 255
GL+ T N LL LC + K+ A +F E+ K P+ T++ I+G CK+
Sbjct: 4 LGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTM 63
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
A +++M+ GC P V++Y+TII S C+ ++ + EM +G PP+V TY++++
Sbjct: 64 ALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILH 123
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
G EA + ++M P+ F LI L + + EA V++ M E G+
Sbjct: 124 GFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFET-MTEKGLE 182
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS 435
PD T+N ++ + ++A + M++ + C PNV++++ L+ K+G+ DE
Sbjct: 183 PDVYTYNALVDGYCSRSQMDEAQKLFNIMDR-KGCAPNVRSYNILINGHCKSGRIDEA-K 240
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE 495
LL +M +K L+ DI TY+ ++ G C+ + + A L KEM + + P T ++LD
Sbjct: 241 GLLAEMSHKS-LTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDG 299
Query: 496 V-KQKHMYDAAEKIEAV 511
+ K H+ +A E ++A+
Sbjct: 300 LCKHGHLDEAFELLKAM 316
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 174/368 (47%), Gaps = 5/368 (1%)
Query: 139 MMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
++ + K + MD ++ E + GH + T + ++ G A++ ++ G
Sbjct: 16 LLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQLLKKMEEKG 75
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQ 257
+ N N ++D+LCK+ V A F E+ K IPP+ T++ +HG+C + RV+EA
Sbjct: 76 CKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEAT 135
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
++M P ++++ +I C++ S+ + + + M +G P+V TY ++
Sbjct: 136 SLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGY 195
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
+EA ++ M G P+ R +N LI ++ R+ EA + EM + PD
Sbjct: 196 CSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLL-AEMSHKSLTPD 254
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
T++T++ F G ++A +L+EM PN+ T+ +L K G DE +L
Sbjct: 255 IFTYSTLMRGFCQVGRPQEAQELLKEMCSY-GLLPNLITYSIVLDGLCKHGHLDEAF-EL 312
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVK 497
L M + + +I YT++I G+C K E A LF + I P T +++ +
Sbjct: 313 LKAM-QESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLL 371
Query: 498 QKHMYDAA 505
+ + + A
Sbjct: 372 KGGLSNEA 379
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 155/322 (48%), Gaps = 10/322 (3%)
Query: 165 IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARS 224
+VT NT+ + + DAV+ FDE+ G E + T + +++ LCK G +A
Sbjct: 10 LVTFNTL---LSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQ 66
Query: 225 VF--LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSY 282
+ +E K C PN +N I CK V EA EM G P V +YS+I+ +
Sbjct: 67 LLKKMEEKGC-KPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGF 125
Query: 283 CRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDS 342
C ++ L +M + PN VT+T ++ L K EA + E M G +PD
Sbjct: 126 CNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDV 185
Query: 343 RFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLE 402
+N L+ S++ EA ++ + M G AP+ ++N +I G ++A +L
Sbjct: 186 YTYNALVDGYCSRSQMDEAQKLFNI-MDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLA 244
Query: 403 EMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC 462
EM+ + P++ T+ L++ + G+ E +LL +M + + L ++ TY++V+ GLC
Sbjct: 245 EMSH-KSLTPDIFTYSTLMRGFCQVGRPQEA-QELLKEMCS-YGLLPNLITYSIVLDGLC 301
Query: 463 RANKCEWAYLLFKEMIGHDITP 484
+ + A+ L K M I P
Sbjct: 302 KHGHLDEAFELLKAMQESKIEP 323
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 142/274 (51%), Gaps = 7/274 (2%)
Query: 186 DAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIF 243
+A F+ + GLE + T N L+D C +++ A+ +F ++ K C PN ++NI
Sbjct: 168 EAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGC-APNVRSYNIL 226
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
I+G CK R+DEA+ + EM P + +YST+++ +C+ + ELL EM + G
Sbjct: 227 INGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGL 286
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
PN++TY+ V+ L K G +EA + + M+ +P+ + LI + +++ A
Sbjct: 287 LPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARE 346
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
++ + G+ P T+ MI+ G +A + EM + C PN T++ +++
Sbjct: 347 LFS-NLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREM-AVNGCLPNSCTYNVIIQG 404
Query: 424 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLV 457
+ G T + +L+++MV K S D +T+ ++
Sbjct: 405 FLRNGDTPNAV-RLIEEMVGK-GFSADSSTFRML 436
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 125/246 (50%), Gaps = 4/246 (1%)
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
G P +++++T++ C + +L DEM G P+V+TY+T+++ L K G+ A
Sbjct: 5 GLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMA 64
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
+++ +KM+ G KP+ +N +I +L + V EA+ + EM + G+ PD T+++++
Sbjct: 65 LQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFS-EMVKEGIPPDVFTYSSILH 123
Query: 387 MFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHH 446
F + G +A + ++M + + PN TF L+ K E + L+ + + +
Sbjct: 124 GFCNLGRVNEATSLFKQMVE-RNVIPNKVTFTILIDGLCKKRMISE--AWLVFETMTEKG 180
Query: 447 LSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAE 506
L D+ TY ++ G C ++ + A LF M P ++ ++++ + D A+
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAK 240
Query: 507 KIEAVM 512
+ A M
Sbjct: 241 GLLAEM 246
>gi|297851460|ref|XP_002893611.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
lyrata]
gi|297339453|gb|EFH69870.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
lyrata]
Length = 814
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 116/437 (26%), Positives = 204/437 (46%), Gaps = 21/437 (4%)
Query: 83 VFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVD 142
+ +SLK VC + R +DD + AL F WA Y H +Y M++
Sbjct: 171 LLRSLKPSQVCAVL------------RSQDDERVALKFFYWADRQWRYRHDPMVYYSMLE 218
Query: 143 ILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEK 201
+L K + R +L M +G T +VM +S AGQ DA++ + G+E
Sbjct: 219 VLSKTKMCQGARRVLVLMKRRGIYRTPEAFLRVMVSYSRAGQLRDALKVLTLMQRAGVEP 278
Query: 202 NTETMNLLLDTLCKEGKVELARSVFLELKSC--IPPNAHTFNIFIHGWCKINRVDEAQWT 259
N N +D + ++E A FLE I PN T+N I G+C ++RV+EA
Sbjct: 279 NLLICNTTIDVFVRANRLEKALR-FLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIEL 337
Query: 260 IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ-GCPPNVVTYTTVMSYLA 318
+ +M GC P +SY TI+ C++ +V +L+ +M + G + VTY T++ L
Sbjct: 338 LDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVRDQVTYNTLIHMLT 397
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDT 378
K +EA+ + + G + D ++ +++ L + R+ EA + + + PD
Sbjct: 398 KHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDV 457
Query: 379 STFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLL 438
T+ ++ F G +KA +L+ M+ + KPN ++ LL +TGK+ E +
Sbjct: 458 VTYTAVVNGFCRLGEVDKAKKLLQIMHTHGY-KPNTVSYTALLNGLCRTGKSLEAREMM- 515
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-K 497
+M + S + TY++++HGL + K A + +EM+ P L+L + +
Sbjct: 516 -NMSEEQWWSPNSITYSVLMHGLRKEGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCR 574
Query: 498 QKHMYDAAEKIEAVMKK 514
++A + +E + K
Sbjct: 575 DGRTHEARKFMEECLNK 591
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 181/372 (48%), Gaps = 24/372 (6%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGH-----IVTLNTIAKVMRRFSGAGQWEDAVRTF 191
Y ++ L K +++ ++R L+++M+K H VT NT+ ++ + A ++A+
Sbjct: 353 YYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVRDQVTYNTLIHMLTKHDHA---DEALWFL 409
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCK 249
+ G + + ++ LCKEG++ A+ + E+ K PP+ T+ ++G+C+
Sbjct: 410 KDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCR 469
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
+ VD+A+ +Q M HG P +SY+ ++ CR + E+++ + Q PN +T
Sbjct: 470 LGEVDKAKKLLQIMHTHGYKPNTVSYTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSIT 529
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM 369
Y+ +M L K G EA + +M + G P N L+ +L R R EA + E
Sbjct: 530 YSVLMHGLRKEGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEA-RKFMEEC 588
Query: 370 PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
G A + F T+I F + + A VL++M L + +V T+ L+ + K G+
Sbjct: 589 LNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDM-YLINKHADVFTYTTLVDALGKKGR 647
Query: 430 TDECLSQLLDDMVNKHHLSLDIT--TYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
E ++L+ M+ H +D T TY VIH C+ K + + ++MI Q
Sbjct: 648 IAEA-TELMKKML---HKGIDPTPVTYRTVIHRYCQMEKVDDLVAILEKMILR------Q 697
Query: 488 TCRLILDEVKQK 499
C+ I ++V +K
Sbjct: 698 KCKTIYNQVIEK 709
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 73/172 (42%), Gaps = 4/172 (2%)
Query: 152 QMRALLEE-MSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLL 210
+ R +EE ++KG + + V+ F + + A+ D++ + T L+
Sbjct: 580 EARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLV 639
Query: 211 DTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCH 269
D L K+G++ A + + L I P T+ IH +C++ +VD+ +++M
Sbjct: 640 DALGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMEKVDDLVAILEKMILR--Q 697
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSG 321
C Y+ +I+ C + +LL ++ + T +M K G
Sbjct: 698 KCKTIYNQVIEKLCGLGKLEEADKLLGKVLRTASRSDAKTCYALMEGYLKIG 749
>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
Length = 801
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 116/486 (23%), Positives = 210/486 (43%), Gaps = 75/486 (15%)
Query: 93 CNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSC---PGYEHSSEIYEMMV-DILGK 146
CN P+ L N L+H + + D+ A + +C PGY +Y + + I G+
Sbjct: 173 CN---PNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYV----VYNIFIGSICGQ 225
Query: 147 VRQMDQMRALLEEMSKGHIVTLN------TIAKVMRRFSGAGQWEDAVRTFDELGTFGLE 200
+ L E G ++ N +A R G G+++ A + E+ G
Sbjct: 226 EKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFV 285
Query: 201 KNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWT 259
+T T + ++ LC KVE A +F E+K + P+ +T+ I I +CK +++AQW
Sbjct: 286 PDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWL 345
Query: 260 IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK 319
+EM+ GC P V++Y+ +I +Y + + ++ M GC PN VTY ++ L K
Sbjct: 346 FEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCK 405
Query: 320 SGDFEEAIRITEKMKIVGSKPDSRF----------------------------------- 344
+G+ +A + K+ DS F
Sbjct: 406 AGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHE 465
Query: 345 ----------------FNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF 388
++ LI +A ++ A V+ ++M + G P T+ ++I
Sbjct: 466 LLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF-LQMTKCGYLPSVHTYTSLIDRM 524
Query: 389 SHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
G + A VL +M K + C PNV T+ ++ + G++++ L L ++ + S
Sbjct: 525 FKDGRLDLAMKVLSQMLK-DSCTPNVVTYTAMIDGLCRIGESEKALKLL--SLMEEKGCS 581
Query: 449 LDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
++ TYT +I GL +A K + + LF +M +P Y T R++++ + + D A +
Sbjct: 582 PNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLL 641
Query: 509 EAVMKK 514
MK+
Sbjct: 642 LGEMKQ 647
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/444 (23%), Positives = 185/444 (41%), Gaps = 68/444 (15%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
GY S Y +V +L Q+D + +EMS+ G + T+ G+W DA
Sbjct: 35 GYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADA 94
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIH 245
+ D + + +T ++ L + + A S + SCI PN T+ +
Sbjct: 95 L---DMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCI-PNVVTYRTLLS 150
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G+ K ++ + I M GC+P +++++ SYC + +++ Y+LL+ M GCPP
Sbjct: 151 GFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPP 210
Query: 306 NVVTYTTVMSY-----------------------------------------LAKSGDFE 324
V Y + L G F+
Sbjct: 211 GYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFD 270
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTM 384
+A ++ ++M G PD+ ++ +I L A++V++A ++Q EM GV PD T+ +
Sbjct: 271 KAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQ-EMKMVGVTPDVYTYTIL 329
Query: 385 ITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK 444
I F G E+A + EEM + C P V T+ L+ + K + + + + MV+
Sbjct: 330 IDSFCKAGLIEQAQWLFEEMRSV-GCSPTVVTYTALIHAYLKAKQVPQA-NDIFHRMVDA 387
Query: 445 HHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG----------------HDITPRYQT 488
D+ TY ++ GLC+A A+ ++ ++IG H + P T
Sbjct: 388 GCRPNDV-TYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVT 446
Query: 489 CRLILDEVKQKHMYDAAEKIEAVM 512
++D + + H D A ++ M
Sbjct: 447 YGALVDGLCKAHKVDHAHELLDAM 470
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 142/320 (44%), Gaps = 7/320 (2%)
Query: 191 FDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCK 249
D + + G E N + L+D CK GK++ A+ VFL++ C P+ HT+ I K
Sbjct: 467 LDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFK 526
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
R+D A + +M C P V++Y+ +I CR K +LL M+ +GC PNVVT
Sbjct: 527 DGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVT 586
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM 369
YT ++ L K+G + ++ + +M G P+ + LI L A + +A + EM
Sbjct: 587 YTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLG-EM 645
Query: 370 PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
+ + I FS + +LEEM + + + +L CF
Sbjct: 646 KQTYWPKYLQGYRCAIQGFSKS--FIASLGILEEME--SYGTVPIAPVYGMLIDCFSKAG 701
Query: 430 TDECLSQLLDDMVN-KHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
E +L +M+ + D Y +I LC A++ E A+ L+ EM P
Sbjct: 702 RLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSV 761
Query: 489 CRLILDEVKQKHMYDAAEKI 508
++ + + +D A ++
Sbjct: 762 FVCLIKGLVEVKKWDEALQL 781
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 138/342 (40%), Gaps = 60/342 (17%)
Query: 74 VHVGSSEDEVFQSLKQDH--------VCNAIQPSHYLVNKLIHRFKDDWK--SALGIFRW 123
V G+ D + ++ K DH + + +P+H + + LI F K SA +F
Sbjct: 445 VTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQ 504
Query: 124 AGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKG----HIVTLNTIAKVMRRFS 179
C GY S Y ++D + K ++D +L +M K ++VT + + R
Sbjct: 505 MTKC-GYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRI- 562
Query: 180 GAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNA 237
G+ E A++ + G N T L+D L K GK++L+ +F ++ K C PN
Sbjct: 563 --GESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGC-SPNY 619
Query: 238 HTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDE 297
T+ + I+ C +D+A+ + EMK + Y IQ + + +F +L+E
Sbjct: 620 VTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSK--SFIASLGILEE 677
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFE--------------------------------- 324
M++ G P Y ++ +K+G E
Sbjct: 678 MESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLA 737
Query: 325 ----EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
EA R+ +M G P+ F CLI L + EA+
Sbjct: 738 SQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEAL 779
>gi|449442339|ref|XP_004138939.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Cucumis sativus]
Length = 559
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 189/388 (48%), Gaps = 17/388 (4%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILG----KVRQMDQMRALL 157
LV ++HR + D K A F WA Y H +Y M+DIL KV+Q + LL
Sbjct: 118 LVADILHRLRFDEKLAFRFFTWAARQENYSHEPRVYNEMIDILSSTRYKVKQFRIVCDLL 177
Query: 158 EEMSKG--HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTE--TMNLLLDTL 213
+ M + + V + + ++R ++ ++ ++ F + +++ E NLLLD L
Sbjct: 178 DYMKRNDKNTVPVEVLFGILRNYTD--KYLTCLQKFAKKKKVIVKRQPEINAFNLLLDAL 235
Query: 214 CKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI 273
CK VE A ++ ++K + P+A+T+NI GWC++ ++EM G P
Sbjct: 236 CKCSLVEDAEALLKKVKKKLKPDANTYNIMFFGWCRVRNPGRGMRVLEEMIELGFDPDNF 295
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCP---PNVVTYTTVMSYLAKSGDFEEAIRIT 330
+Y+T I S+C+ + EL + M+ +G P TY ++ L +G EE +
Sbjct: 296 TYNTAIASFCKAGMLKEACELFEFMRTKGSALSSPTAKTYAIMIVALVNNGRMEECFKFL 355
Query: 331 EKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSH 390
E M G PD + +I + A +VQEA Y++ EM + G PD T+N + +
Sbjct: 356 EYMIKSGCLPDVSTYKEMIEGICVAGKVQEA-YMFLEEMGKKGYPPDIVTYNCFLKVLCD 414
Query: 391 HGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLD 450
+ + A + M ++ C P+VQT++ L+ F+ + L+ ++++ + D
Sbjct: 415 NKMSDDALRHCDRMIEV-GCLPSVQTYNMLISMFFEMNDHNGAFQIWLE--MDRYGCTRD 471
Query: 451 ITTYTLVIHGLCRANKCEWAYLLFKEMI 478
+ +Y ++I GL NK A LL +E++
Sbjct: 472 VDSYCIMIEGLFGCNKVGDACLLLEEVV 499
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 87/209 (41%), Gaps = 18/209 (8%)
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFN------CLIYTLGRASRV 358
P + + ++ L K E+A K KPD+ +N C + GR RV
Sbjct: 223 PEINAFNLLLDALCKCSLVEDA-EALLKKVKKKLKPDANTYNIMFFGWCRVRNPGRGMRV 281
Query: 359 QEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHC--KPNVQT 416
E EM E G PD T+NT I F G ++A + E M P +T
Sbjct: 282 LE-------EMIELGFDPDNFTYNTAIASFCKAGMLKEACELFEFMRTKGSALSSPTAKT 334
Query: 417 FHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKE 476
+ ++ + G+ +EC + L+ M+ L D++TY +I G+C A K + AY+ +E
Sbjct: 335 YAIMIVALVNNGRMEECF-KFLEYMIKSGCLP-DVSTYKEMIEGICVAGKVQEAYMFLEE 392
Query: 477 MIGHDITPRYQTCRLILDEVKQKHMYDAA 505
M P T L + M D A
Sbjct: 393 MGKKGYPPDIVTYNCFLKVLCDNKMSDDA 421
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 96/229 (41%), Gaps = 5/229 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIV---TLNTIAKVMRRFSGAGQW 184
G++ + Y + K + + L E M +KG + T T A ++ G+
Sbjct: 289 GFDPDNFTYNTAIASFCKAGMLKEACELFEFMRTKGSALSSPTAKTYAIMIVALVNNGRM 348
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIF 243
E+ + + + G + T +++ +C GKV+ A E+ K PP+ T+N F
Sbjct: 349 EECFKFLEYMIKSGCLPDVSTYKEMIEGICVAGKVQEAYMFLEEMGKKGYPPDIVTYNCF 408
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
+ C D+A M GC P V +Y+ +I + + + +++ EM GC
Sbjct: 409 LKVLCDNKMSDDALRHCDRMIEVGCLPSVQTYNMLISMFFEMNDHNGAFQIWLEMDRYGC 468
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
+V +Y ++ L +A + E++ G K R F+ + L
Sbjct: 469 TRDVDSYCIMIEGLFGCNKVGDACLLLEEVVNKGMKLPFRKFDSFLMQL 517
>gi|326520119|dbj|BAK03984.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 485
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/401 (23%), Positives = 188/401 (46%), Gaps = 16/401 (3%)
Query: 90 DHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWA------GSCPGYEHSSEIYEMMVDI 143
DH + P + +++ R + A F WA G C H+ + +V
Sbjct: 57 DHSDLRVTPD--VAERVLERLDNAGMLAYRFFEWARKQRRGGGCA---HTVRSFHTVVAS 111
Query: 144 LGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNT 203
L K+RQ M ++ M + +V + T +MR+++ A + ++AV TF+ + +G+ N
Sbjct: 112 LAKIRQYQLMWDVVAIMRRQGVVNVETFGIIMRKYARAQKVDEAVYTFNVMEKYGVVPNL 171
Query: 204 ETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
N LL LCK V A+ +F ++ P+A T++I + GW + + + + +M
Sbjct: 172 AAFNSLLCALCKSKNVRKAQEIFEQMNGRFSPDAKTYSILLEGWGRAPNLPKMRKVYSDM 231
Query: 264 KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF 323
GC P +++Y ++ S C+ + ++ +M ++GC P Y+ ++
Sbjct: 232 LDAGCQPDIVTYGIMVDSLCKTGRVEEAVFVVQDMTSRGCQPTTFIYSVLVHTYGVEMRI 291
Query: 324 EEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNT 383
E+A+ M+ G PD +N L+ + + A V +M +G+ P++ T+N
Sbjct: 292 EDAVATFLDMQKDGIVPDVVVYNALVTAFCKVKKFDNAFRVMD-DMEGHGITPNSRTWNI 350
Query: 384 MITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVN 443
++ G ++A+ V M ++ C+P+ T+ ++K + + + L ++ M
Sbjct: 351 ILNKLISLGKDDEAYRVFRRM--IKRCQPDSDTYTMMIKMFCENDRLEMAL-KVWKYMRL 407
Query: 444 KHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
K L + T++++I+GLC + A +L ++MI I P
Sbjct: 408 KQFLP-SMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRP 447
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 126/284 (44%), Gaps = 23/284 (8%)
Query: 61 SPRLPDIDVIISK-VHVGSSEDEVFQSLKQDHVCNA--IQPSHYLVNKLIHRFKDDWKSA 117
+P LP + + S + G D V + D +C ++ + ++V + R
Sbjct: 218 APNLPKMRKVYSDMLDAGCQPDIVTYGIMVDSLCKTGRVEEAVFVVQDMTSR-------- 269
Query: 118 LGIFRWAGSCPGYEHSSEIYEMMVDILG-KVRQMDQMRALLEEMSKGHIVTLNTIAKVMR 176
G + ++ IY ++V G ++R D + L+ G + + ++
Sbjct: 270 -----------GCQPTTFIYSVLVHTYGVEMRIEDAVATFLDMQKDGIVPDVVVYNALVT 318
Query: 177 RFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPN 236
F ++++A R D++ G+ N+ T N++L+ L GK + A VF + P+
Sbjct: 319 AFCKVKKFDNAFRVMDDMEGHGITPNSRTWNIILNKLISLGKDDEAYRVFRRMIKRCQPD 378
Query: 237 AHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLD 296
+ T+ + I +C+ +R++ A + M+ P + ++S +I C + S+ LL+
Sbjct: 379 SDTYTMMIKMFCENDRLEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLE 438
Query: 297 EMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
+M +G P T+ + L K G + + +KMKI+ +P
Sbjct: 439 DMIEKGIRPPGSTFGKLRQLLLKEGRKDVLEFLVDKMKILIQEP 482
>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
Length = 736
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/482 (23%), Positives = 208/482 (43%), Gaps = 72/482 (14%)
Query: 97 QPSHYLVNKLIHRF--KDDWKSALGIFRWAGSC---PGYEHSSEIYEMMV-DILGKVRQM 150
P+ L N L+H + + D+ A + +C PGY +Y + + I G+ +
Sbjct: 109 NPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYV----VYNIFIGSICGQEKLP 164
Query: 151 DQMRALLEEMSKGHIVTLN------TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTE 204
L E G ++ N +A R G G+++ A + E+ G +T
Sbjct: 165 SPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTS 224
Query: 205 TMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
T + ++ LC KVE A +F E+K + P+ +T+ I I +CK +++AQW +EM
Sbjct: 225 TYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEM 284
Query: 264 KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF 323
+ GC P V++Y+ +I +Y + + ++ M GC PN VTY ++ L K+G+
Sbjct: 285 RSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNI 344
Query: 324 EEAIRITEKMKIVGSKPDSRF--------------------------------------- 344
+A + K+ DS F
Sbjct: 345 SKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDA 404
Query: 345 ------------FNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
++ LI +A ++ A V+ ++M + G P T+ ++I G
Sbjct: 405 MLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF-LQMTKCGYLPSVHTYTSLIDRMFKDG 463
Query: 393 HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
+ A VL +M K + C PNV T+ ++ + G++++ L L ++ + S ++
Sbjct: 464 RLDLAMKVLSQMLK-DSCTPNVVTYTAMIDGLCRIGESEKALKLL--SLMEEKGCSPNVV 520
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
TYT +I GL +A K + + LF +M +P Y T R++++ + + D A + M
Sbjct: 521 TYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEM 580
Query: 513 KK 514
K+
Sbjct: 581 KQ 582
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 142/320 (44%), Gaps = 7/320 (2%)
Query: 191 FDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCK 249
D + + G E N + L+D CK GK++ A+ VFL++ C P+ HT+ I K
Sbjct: 402 LDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFK 461
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
R+D A + +M C P V++Y+ +I CR K +LL M+ +GC PNVVT
Sbjct: 462 DGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVT 521
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM 369
YT ++ L K+G + ++ + +M G P+ + LI L A + +A + EM
Sbjct: 522 YTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLG-EM 580
Query: 370 PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
+ + I FS + +LEEM + + + +L CF
Sbjct: 581 KQTYWPKYLQGYRCAIQGFSKS--FIASLGILEEME--SYGTVPIAPVYGMLIDCFSKAG 636
Query: 430 TDECLSQLLDDMVN-KHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
E +L +M+ + D Y +I LC A++ E A+ L+ EM P
Sbjct: 637 RLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSV 696
Query: 489 CRLILDEVKQKHMYDAAEKI 508
++ + + +D A ++
Sbjct: 697 FVCLIKGLVEVKKWDEALQL 716
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/397 (22%), Positives = 167/397 (42%), Gaps = 24/397 (6%)
Query: 140 MVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
M+ L + D+ + L M I + T ++ F Q R + + T G
Sbjct: 48 MISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEG 107
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRV---- 253
N N L+ + C E A + + +C PP +NIFI C ++
Sbjct: 108 CNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPD 167
Query: 254 --DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
D A+ EM C ++ + + C F K ++L+ EM +G P+ TY+
Sbjct: 168 LLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYS 227
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
V+++L + E+A + ++MK+VG PD + LI + +A +++A ++++ EM
Sbjct: 228 KVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFE-EMRS 286
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK-- 429
G +P T+ +I + +A + M C+PN T+ L+ K G
Sbjct: 287 VGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVD-AGCRPNDVTYGALVDGLCKAGNIS 345
Query: 430 ------------TDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
+D S ++H L+ ++ TY ++ GLC+A+K + A+ L M
Sbjct: 346 KAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAM 405
Query: 478 IGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
+ P + ++D + D+A+++ M K
Sbjct: 406 LSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 442
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 138/342 (40%), Gaps = 60/342 (17%)
Query: 74 VHVGSSEDEVFQSLKQDH--------VCNAIQPSHYLVNKLIHRFKDDWK--SALGIFRW 123
V G+ D + ++ K DH + + +P+H + + LI F K SA +F
Sbjct: 380 VTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQ 439
Query: 124 AGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKG----HIVTLNTIAKVMRRFS 179
C GY S Y ++D + K ++D +L +M K ++VT + + R
Sbjct: 440 MTKC-GYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRI- 497
Query: 180 GAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNA 237
G+ E A++ + G N T L+D L K GK++L+ +F ++ K C PN
Sbjct: 498 --GESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGC-SPNY 554
Query: 238 HTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDE 297
T+ + I+ C +D+A+ + EMK + Y IQ + + +F +L+E
Sbjct: 555 VTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSK--SFIASLGILEE 612
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFE--------------------------------- 324
M++ G P Y ++ +K+G E
Sbjct: 613 MESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLA 672
Query: 325 ----EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
EA R+ +M G P+ F CLI L + EA+
Sbjct: 673 SQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEAL 714
>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 204/418 (48%), Gaps = 14/418 (3%)
Query: 73 KVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKL----IHRFKDDWKSALGIFRWAGSCP 128
K++V S ++SL + ++ SH L+ + + D + L IF G
Sbjct: 47 KMNVESEPATEWESLLEPFDLTKLRKSHILITPVQLCKLLELPLDVPTLLEIFERVGGQK 106
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKV-MRRFSGAGQWEDA 187
GY H+ ++Y + ++ LG + + + LL +M + IV +I + M+ + AGQ A
Sbjct: 107 GYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQA 166
Query: 188 VRTF-DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIH 245
+R D + E ++ +L+L+ L ++A +VF ++ S + P TF I +
Sbjct: 167 IRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMK 226
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
C N VD A +++M HGC P I Y T+I + ++ S+ +LL+EM GC P
Sbjct: 227 ALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMP 286
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
+V T+ V+ L K +A ++ ++M + G PD+ + L++ L R ++ EA +
Sbjct: 287 DVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKIL 346
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
+++P P+ + NT+I + G ++A L E +P++ T++ L+
Sbjct: 347 -IKIP----CPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLC 401
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
K G ++ L + +++ ++ TY ++++GLC+A E A L+ EM +T
Sbjct: 402 KEGSLS--FARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLT 457
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 178/359 (49%), Gaps = 11/359 (3%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAV 188
G+ + Y ++ L ++ ++++ R +L ++ + LNT+ + + +GQ ++A
Sbjct: 318 GFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTL---INGYVMSGQLKEAQ 374
Query: 189 RTFDE-LGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIH 245
+E + FG + + T N+L+ LCKEG + AR + E+ + C PN T+ I ++
Sbjct: 375 SFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGC-EPNVITYAILVN 433
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G CK ++EA + EM G + Y+ +I + CR+ LL EM +GC P
Sbjct: 434 GLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKP 493
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
++ TY +++ L K +EA R+ M + G+ ++ +N LI+ L R Q+A+ +
Sbjct: 494 DLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLV 553
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
+M G D T+N +I F G+ EK + E+M ++ + + + ++
Sbjct: 554 N-DMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQM-IMDGLGADTISCNIMINGLC 611
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
K GK D + L D +N+ + DI TY V++GLC+ + + A LF + + P
Sbjct: 612 KVGKVDNAF-EFLRDAINRGFVP-DIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRP 668
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 118/485 (24%), Positives = 209/485 (43%), Gaps = 53/485 (10%)
Query: 51 LDHHQV-LCVDSPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHY---LVNKL 106
LD V LC P D+++ + G+ +V ++ D + + P+ + +V K
Sbjct: 171 LDMRAVYLC--EPTFKSYDLVLEILVTGNCP-QVATNVFYDMLSKGVSPTVFTFGIVMKA 227
Query: 107 IHRFKDDWKSALGIFRWA---GSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SK 162
+ F ++ SA + R G P +S +Y+ ++ L + Q+ + LLEEM
Sbjct: 228 LCMF-NEVDSACSLLRDMTKHGCVP----NSIVYQTLIHALSQKNQVSEALKLLEEMFVM 282
Query: 163 GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELA 222
G + + T V+ + DA + D + G + T LL LC+ GK+ A
Sbjct: 283 GCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEA 342
Query: 223 RSVFL---------------------ELKSC------------IPPNAHTFNIFIHGWCK 249
R + + +LK P+ T+NI +HG CK
Sbjct: 343 RKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCK 402
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
+ A+ + EM GC P VI+Y+ ++ C+ + +L EM A+G N V
Sbjct: 403 EGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVI 462
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM 369
Y ++ L + A+ + +M G KPD +N LIY L + R+ EA ++ M
Sbjct: 463 YNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFH-NM 521
Query: 370 PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
+G + T+NT+I G +KA ++ +M C + T++ L+K+ K G
Sbjct: 522 LLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDM-LFRGCTLDKITYNGLIKAFCKVGN 580
Query: 430 TDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTC 489
++ L +L + M+ L D + ++I+GLC+ K + A+ ++ I P T
Sbjct: 581 IEKGL-ELYEQMI-MDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTY 638
Query: 490 RLILD 494
+L+
Sbjct: 639 NSVLN 643
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 178/368 (48%), Gaps = 11/368 (2%)
Query: 98 PSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRA 155
P++ ++N LI+ + K A G++ Y +++ L K + R
Sbjct: 352 PNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARD 411
Query: 156 LLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLC 214
L+ EMS+ G + T A ++ AG E+A E+ GL N+ N L+ LC
Sbjct: 412 LVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALC 471
Query: 215 KEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCV 272
++ KV +A ++ E+ K C P+ T+N I+G CK++R+DEA M G
Sbjct: 472 RKEKVHVALNLLSEMCTKGC-KPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANN 530
Query: 273 ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEK 332
++Y+T+I + R+ F K L+++M +GC + +TY ++ K G+ E+ + + E+
Sbjct: 531 VTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQ 590
Query: 333 MKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
M + G D+ N +I L + +V A + + + G PD T+N+++ G
Sbjct: 591 MIMDGLGADTISCNIMINGLCKVGKVDNA-FEFLRDAINRGFVPDIVTYNSVLNGLCKVG 649
Query: 393 HHEKAFHVLEEMNKLEHCKPNVQTFHPLLK-SCFKTGKTDECL--SQLLDDMVNKHHLSL 449
++A ++ + + ++E +P+ T++ + C + D CL + +++ +L+
Sbjct: 650 RIKEALNLFDRL-QVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTW 708
Query: 450 DITTYTLV 457
++ YTL+
Sbjct: 709 NVLVYTLL 716
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 108/246 (43%), Gaps = 7/246 (2%)
Query: 264 KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF 323
KG+ CH + Y I F + +LL +M+ +G + +M + K+G
Sbjct: 106 KGY-CHTFDVYY-VFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQP 163
Query: 324 EEAIRITEKMKIVG-SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFN 382
+AIR+ M+ V +P + ++ ++ L + Q A V+ +M GV+P TF
Sbjct: 164 GQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFY-DMLSKGVSPTVFTFG 222
Query: 383 TMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMV 442
++ + A +L +M K C PN + L+ + + + E L +LL++M
Sbjct: 223 IVMKALCMFNEVDSACSLLRDMTK-HGCVPNSIVYQTLIHALSQKNQVSEAL-KLLEEMF 280
Query: 443 NKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMY 502
+ D+ T+ VIHGLC+ NK A L M+ P T +L + +
Sbjct: 281 VMGCMP-DVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKL 339
Query: 503 DAAEKI 508
+ A KI
Sbjct: 340 NEARKI 345
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/410 (27%), Positives = 200/410 (48%), Gaps = 18/410 (4%)
Query: 83 VFQSLKQDH-VCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEM 139
VF+SL++ + +CN+ LV K R D S + + + G PG + + +
Sbjct: 119 VFRSLQETYDLCNSTSSVFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDA 178
Query: 140 MVDILGKVRQMDQM-RALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
+ + + + + +L+ ++ T N + +R F AG + A+R FD + G
Sbjct: 179 TIRSKRNISFAENVFKEMLQSQVSPNVFTYNIL---IRGFCLAGNLDVALRFFDRMEKKG 235
Query: 199 LEKNTETMNLLLDTLCKEGKV----ELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVD 254
N T N L+D CK K+ EL RS+ L+ + PN ++N+ I+G C+ R+
Sbjct: 236 CLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALK---GLEPNLISYNVVINGLCREGRMK 292
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
E + + EM G ++Y+T+I+ YC++ NF + + EM G P+V+TYT+++
Sbjct: 293 EISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLI 352
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
+ K+G+ A ++M++ G P+ R + L+ + + EA V + EM +NG
Sbjct: 353 HSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLK-EMIDNGF 411
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
+P T+N +I G A VLE+M K + P+V ++ +L ++ DE L
Sbjct: 412 SPSVVTYNALINGHCIAGKMVDAIAVLEDM-KEKGLTPDVVSYSTVLSGFCRSYDVDEAL 470
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
++ MV K + D TY+ +I G C + + A LF EM+ + P
Sbjct: 471 -RVKRKMVAK-GIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPP 518
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 153/317 (48%), Gaps = 6/317 (1%)
Query: 198 GLEKNTETMNLLLD-TLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDE 255
G + N +LD T+ + + A +VF E L+S + PN T+NI I G+C +D
Sbjct: 164 GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDV 223
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
A M+ GC P V++Y+T+I YC+ +ELL M +G PN+++Y V++
Sbjct: 224 ALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVIN 283
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
L + G +E + +M G D +N LI + +A+ V EM +G++
Sbjct: 284 GLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQAL-VMHAEMLRHGLS 342
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS 435
P T+ ++I G+ +A L++M C PN +T+ L+ + G +E
Sbjct: 343 PSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLC-PNERTYTTLVDGFSQKGYMNEAY- 400
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE 495
++L +M++ + S + TY +I+G C A K A + ++M +TP + +L
Sbjct: 401 RVLKEMID-NGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSG 459
Query: 496 VKQKHMYDAAEKIEAVM 512
+ + D A +++ M
Sbjct: 460 FCRSYDVDEALRVKRKM 476
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 163/354 (46%), Gaps = 30/354 (8%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDA 187
G S Y ++ + K M++ L++M +G T ++ FS G +A
Sbjct: 340 GLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEA 399
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHG 246
R E+ G + T N L++ C GK+ A +V ++K + P+ +++ + G
Sbjct: 400 YRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSG 459
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
+C+ VDEA ++M G P I+YS++IQ +C Q + +L DEM G PP+
Sbjct: 460 FCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPD 519
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
TYT +++ GD ++AI++ +M G PD ++ LI L + +R +EA +
Sbjct: 520 EFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLL 579
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP-NVQTFHPLLKS-C 424
E V P T++T+I E+C ++ L+K C
Sbjct: 580 KLFYEESV-PSDVTYHTLI----------------------ENCSNIEFKSVVSLIKGFC 616
Query: 425 FKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
K T+ Q+ + M+ K+H D T Y ++IHG CR AY L+KEM+
Sbjct: 617 MKGMMTEA--DQVFESMLEKNH-KPDGTAYNVMIHGHCRGGDIRKAYSLYKEMV 667
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 129/283 (45%), Gaps = 8/283 (2%)
Query: 235 PNAHTFNIFIHGWCKINR-VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
P ++N + + R + A+ +EM P V +Y+ +I+ +C N
Sbjct: 167 PGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALR 226
Query: 294 LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLG 353
D M+ +GC PNVVTY T++ K ++ + M + G +P+ +N +I L
Sbjct: 227 FFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLC 286
Query: 354 RASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH-CKP 412
R R++E +V EM + G + D T+NT+I + G+ +A + EM L H P
Sbjct: 287 REGRMKEISFVL-TEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEM--LRHGLSP 343
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
+V T+ L+ S K G + ++ LD M L + TYT ++ G + AY
Sbjct: 344 SVITYTSLIHSMCKAGNMNRA-TEFLDQM-RVRGLCPNERTYTTLVDGFSQKGYMNEAYR 401
Query: 473 LFKEMIGHDITPRYQTCR-LILDEVKQKHMYDAAEKIEAVMKK 514
+ KEMI + +P T LI M DA +E + +K
Sbjct: 402 VLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEK 444
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 143/319 (44%), Gaps = 10/319 (3%)
Query: 194 LGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIP---PNAHTFNIFIHGWCKI 250
L F L K +T L D K E A VF L+ + F++ + + ++
Sbjct: 90 LTRFKLYKTAQT--LAEDVAAKTLDDEDASLVFRSLQETYDLCNSTSSVFDLVVKSYSRL 147
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCR-QYNFSKVYELLDEMQAQGCPPNVVT 309
+D+A + + HG P V+SY+ ++ + R + N S + EM PNV T
Sbjct: 148 CLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFT 207
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM 369
Y ++ +G+ + A+R ++M+ G P+ +N LI + ++ + + + M
Sbjct: 208 YNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLR-SM 266
Query: 370 PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
G+ P+ ++N +I G ++ VL EMNK + V T++ L+K K G
Sbjct: 267 ALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEV-TYNTLIKGYCKEGN 325
Query: 430 TDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTC 489
+ L ++ + +H LS + TYT +IH +C+A A +M + P +T
Sbjct: 326 FHQAL--VMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTY 383
Query: 490 RLILDEVKQKHMYDAAEKI 508
++D QK + A ++
Sbjct: 384 TTLVDGFSQKGYMNEAYRV 402
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 73/172 (42%), Gaps = 16/172 (9%)
Query: 170 TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL 229
T ++ + G + A++ +E+ G+ + T ++L++ L K+ + A+ + L+L
Sbjct: 522 TYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKL 581
Query: 230 --KSCIPPNA--HTF-----NI-------FIHGWCKINRVDEAQWTIQEMKGHGCHPCVI 273
+ +P + HT NI I G+C + EA + M P
Sbjct: 582 FYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGT 641
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEE 325
+Y+ +I +CR + K Y L EM G + VT ++ L K G E
Sbjct: 642 AYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNE 693
>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
Length = 1010
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 188/383 (49%), Gaps = 16/383 (4%)
Query: 128 PGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWED 186
PG+ ++ +++D LG V + Q +M + + + ++ +F+ G+ +
Sbjct: 23 PGFGVFDALFSVLID-LGMVEEAIQ---CFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDG 78
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIH 245
R F ++ G + T N+++D +CKEG VE AR +F E+K + P+ T+N I
Sbjct: 79 VKRFFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMID 138
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G+ K+ R+D+ +EMK C P VI+Y+ +I +C+ K E EM+ G P
Sbjct: 139 GFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKP 198
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
NVV+Y+T++ K G ++AI+ M+ VG P+ + LI + + +A +
Sbjct: 199 NVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLA 258
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
EM + GV + T+ +I + + H+L+EM +L+ K V TF L+
Sbjct: 259 N-EMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELD-IKVTVVTFCVLIDGLC 316
Query: 426 KTGKTDECLSQLLD---DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
K ++ +S+ +D + N L + YT +I GLC+ N+ E A LF++M +
Sbjct: 317 K----NKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGL 372
Query: 483 TP-RYQTCRLILDEVKQKHMYDA 504
P R L+ KQ ++ +A
Sbjct: 373 VPDRTAYTSLMDGNFKQGNVLEA 395
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 182/400 (45%), Gaps = 8/400 (2%)
Query: 98 PSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEI--YEMMVDILGKVRQMDQMRA 155
P N L+H+F K+ G+ R+ G + Y +M+D + K ++ R
Sbjct: 58 PKTRSCNGLLHKFAKLGKTD-GVKRFFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARG 116
Query: 156 LLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLC 214
L EEM +G I T ++ F G+ +D V F+E+ E + T N L++ C
Sbjct: 117 LFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFC 176
Query: 215 KEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI 273
K GK+ F E+K + + PN +++ + +CK + +A +M+ G P
Sbjct: 177 KFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEY 236
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
+Y+++I +YC+ N S + L +EM G NVVTYT ++ L + E + + ++M
Sbjct: 237 TYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEM 296
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
+ K F LI L + V +A+ + + G+ + + + MI
Sbjct: 297 VELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQ 356
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
E A + E+M + + P+ + L+ FK G E L+ L D MV + + LD+
Sbjct: 357 VEAATTLFEQMAQ-KGLVPDRTAYTSLMDGNFKQGNVLEALA-LRDKMV-ETGMKLDLLA 413
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
YT ++ GL N+ + A +EMIG I P C +L
Sbjct: 414 YTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVL 453
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 91/215 (42%), Gaps = 8/215 (3%)
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
C P + + S L G EEAI+ KMK P +R N L++ + + + V
Sbjct: 21 CVPGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKT-DGV 79
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLK 422
+ +M G P T+N MI G E A + EEM K P+ T++ ++
Sbjct: 80 KRFFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEM-KFRGLIPDTVTYNSMID 138
Query: 423 SCFKTGKTDE--CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH 480
K G+ D+ C + + DM D+ TY +I+ C+ K F+EM +
Sbjct: 139 GFGKVGRLDDTVCFFEEMKDMC----CEPDVITYNALINCFCKFGKLPKGLEFFREMKRN 194
Query: 481 DITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
+ P + ++D ++ M A K M+++
Sbjct: 195 GLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRV 229
>gi|449505615|ref|XP_004162522.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g73400, mitochondrial-like [Cucumis sativus]
Length = 559
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 189/388 (48%), Gaps = 17/388 (4%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILG----KVRQMDQMRALL 157
LV ++HR + D K A F WA Y H +Y M+DIL KV+Q + LL
Sbjct: 118 LVADILHRLRFDEKLAFRFFTWAARQENYSHEPRVYNEMIDILSSTRYKVKQFRIVCDLL 177
Query: 158 EEMSKG--HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTE--TMNLLLDTL 213
+ M + + V + + ++R ++ ++ ++ F + +++ E NLLLD L
Sbjct: 178 DYMKRNDKNTVPVEVLFGILRNYTD--KYLTCLQKFAKKKKVIVKRQPEINAFNLLLDAL 235
Query: 214 CKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI 273
CK VE A ++ ++K + P+A+T+NI GWC++ ++EM G P
Sbjct: 236 CKCSLVEDAEALLKKVKKKLKPDANTYNIMXFGWCRVRNPGRGMRVLEEMIELGFDPDNF 295
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCP---PNVVTYTTVMSYLAKSGDFEEAIRIT 330
+Y+T I S+C+ + EL + M+ +G P TY ++ L +G EE +
Sbjct: 296 TYNTAIASFCKAGMLKEACELFEFMRTKGSALSSPTAKTYAIMIVALVNNGRMEECFKFL 355
Query: 331 EKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSH 390
E M G PD + +I + A +VQEA Y++ EM + G PD T+N + +
Sbjct: 356 EYMIKSGCLPDVSTYKEMIEGICVAGKVQEA-YMFLEEMGKKGYPPDIVTYNCFLKVLCD 414
Query: 391 HGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLD 450
+ + A + M ++ C P+VQT++ L+ F+ + L+ ++++ + D
Sbjct: 415 NKMSDDALRHCDRMIEV-GCLPSVQTYNMLISMFFEMNDHNGAFQIWLE--MDRYGCTRD 471
Query: 451 ITTYTLVIHGLCRANKCEWAYLLFKEMI 478
+ +Y ++I GL NK A LL +E++
Sbjct: 472 VDSYCIMIEGLFGCNKVGDACLLLEEVV 499
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 87/209 (41%), Gaps = 18/209 (8%)
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFN------CLIYTLGRASRV 358
P + + ++ L K E+A K KPD+ +N C + GR RV
Sbjct: 223 PEINAFNLLLDALCKCSLVEDA-EALLKKVKKKLKPDANTYNIMXFGWCRVRNPGRGMRV 281
Query: 359 QEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHC--KPNVQT 416
E EM E G PD T+NT I F G ++A + E M P +T
Sbjct: 282 LE-------EMIELGFDPDNFTYNTAIASFCKAGMLKEACELFEFMRTKGSALSSPTAKT 334
Query: 417 FHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKE 476
+ ++ + G+ +EC + L+ M+ L D++TY +I G+C A K + AY+ +E
Sbjct: 335 YAIMIVALVNNGRMEECF-KFLEYMIKSGCLP-DVSTYKEMIEGICVAGKVQEAYMFLEE 392
Query: 477 MIGHDITPRYQTCRLILDEVKQKHMYDAA 505
M P T L + M D A
Sbjct: 393 MGKKGYPPDIVTYNCFLKVLCDNKMSDDA 421
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 96/229 (41%), Gaps = 5/229 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIV---TLNTIAKVMRRFSGAGQW 184
G++ + Y + K + + L E M +KG + T T A ++ G+
Sbjct: 289 GFDPDNFTYNTAIASFCKAGMLKEACELFEFMRTKGSALSSPTAKTYAIMIVALVNNGRM 348
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIF 243
E+ + + + G + T +++ +C GKV+ A E+ K PP+ T+N F
Sbjct: 349 EECFKFLEYMIKSGCLPDVSTYKEMIEGICVAGKVQEAYMFLEEMGKKGYPPDIVTYNCF 408
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
+ C D+A M GC P V +Y+ +I + + + +++ EM GC
Sbjct: 409 LKVLCDNKMSDDALRHCDRMIEVGCLPSVQTYNMLISMFFEMNDHNGAFQIWLEMDRYGC 468
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
+V +Y ++ L +A + E++ G K R F+ + L
Sbjct: 469 TRDVDSYCIMIEGLFGCNKVGDACLLLEEVVNKGMKLPFRKFDSFLMQL 517
>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
Length = 948
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 134/528 (25%), Positives = 234/528 (44%), Gaps = 82/528 (15%)
Query: 51 LDHHQVLCVDSPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRF 110
LD V C + P +V++ ++ V + +V ++ D + I P+ Y ++ F
Sbjct: 153 LDMWGVYCFE-PTFKSYNVVL-EILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAF 210
Query: 111 --KDDWKSALGIFRWA---GSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGH 164
++ SA + R G P +S IY+M++ L + ++++ LLEEM G
Sbjct: 211 CMVNEVDSACSLLRDMTKHGCVP----NSIIYQMLIHALSENNRVNEAMKLLEEMFLMGC 266
Query: 165 IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARS 224
+ T V+ AG+ +A + D + + L+ LC+ GKV+ AR+
Sbjct: 267 EPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARA 326
Query: 225 V------------------------FLELKSCI---------PPNAHTFNIFIHGWCKIN 251
+ F E K + P+A TFNI I G CK
Sbjct: 327 MLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKG 386
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
+ A + EM G P VI+Y+ +I +C+Q +F + ++++ M A+G N V Y
Sbjct: 387 YLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYN 446
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
++ L K G ++A+++ +M G KPD FN LIY L + +++EA+ +Y+ +M
Sbjct: 447 CLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYR-DMLL 505
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
GV +T T+NT+I F ++A ++ EM + C + T++ L+K+ KTG T+
Sbjct: 506 EGVIANTVTYNTLIHAFLRLELIQQADKLVGEM-RFRGCPLDNITYNGLIKALCKTGATE 564
Query: 432 ECLS----------------------------------QLLDDMVNKHHLSLDITTYTLV 457
+CL Q L DM+ + L+ DI TY +
Sbjct: 565 KCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRG-LTPDIVTYNSL 623
Query: 458 IHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
I+GLC+ + + A LF + I P T ++ + +++ A
Sbjct: 624 INGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDA 671
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 125/446 (28%), Positives = 203/446 (45%), Gaps = 41/446 (9%)
Query: 94 NAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQM 153
N I PS + KL+ D +++ +F AG GY HS +Y +++D LG V + +
Sbjct: 57 NPITPSQ--LCKLLE-LPLDVPTSMDLFEKAGLQRGYIHSFHVYYLLIDKLGNVGEFKMI 113
Query: 154 RALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTF-DELGTFGLEKNTETMNLLLD 211
LL++M +G + + +MR + AG A R D G + E ++ N++L+
Sbjct: 114 DKLLKQMKDEGCVFKESLFILIMRYYGKAGLPGQATRLLLDMWGVYCFEPTFKSYNVVLE 173
Query: 212 TLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHP 270
L ++A +VF ++ S I P +TF + + +C +N VD A +++M HGC P
Sbjct: 174 ILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVP 233
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRIT 330
I Y +I + ++ +LL+EM GC P+V T+ V+ L K+G EA ++
Sbjct: 234 NSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLH 293
Query: 331 EKM----------------------------KIVGSK---PDSRFFNCLIYTLGRASRVQ 359
++M + + SK P++ +N LI + R +
Sbjct: 294 DRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFE 353
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
EA + M G PD TFN MI G+ A L+EM K + +PNV T+
Sbjct: 354 EAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVK-KGFEPNVITYTI 412
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
L+ K G +E S++++ M K LSL+ Y +I LC+ K + A ++ EM
Sbjct: 413 LIDGFCKQGHFEEA-SKVVNSMSAK-GLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSS 470
Query: 480 HDITPR-YQTCRLILDEVKQKHMYDA 504
P Y LI K M +A
Sbjct: 471 KGCKPDIYTFNSLIYGLCKNDKMEEA 496
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 188/375 (50%), Gaps = 12/375 (3%)
Query: 97 QPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMR 154
P+ L N LI+ + ++ A + G+E + + +M+D L K +
Sbjct: 333 NPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSAL 392
Query: 155 ALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTL 213
L+EM KG + T ++ F G +E+A + + + GL NT N L+ L
Sbjct: 393 EFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGAL 452
Query: 214 CKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPC 271
CK+GK++ A ++ E+ K C P+ +TFN I+G CK ++++EA ++M G
Sbjct: 453 CKDGKIQDALQMYGEMSSKGC-KPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIAN 511
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
++Y+T+I ++ R + +L+ EM+ +GCP + +TY ++ L K+G E+ + + E
Sbjct: 512 TVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIE 571
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHH 391
+M P N LI + R +V +A+ + +M + G+ PD T+N++I
Sbjct: 572 QMFGEEIFPSINSCNILINSFCRTGKVNDALQFLR-DMIQRGLTPDIVTYNSLINGLCKM 630
Query: 392 GHHEKAFHVLEEMNKLEHCKPNVQTFHPLL-KSCFKTGKTDECLSQLLDDMVNKHHLSLD 450
G ++A ++ + + + P+ T++ L+ + C++ D C QLL V+ + +
Sbjct: 631 GRFQEALNLFNGL-QAKGIHPDAVTYNTLISRYCYEGLFNDAC--QLLFKGVSNGFIPNE 687
Query: 451 ITTYTLVIHGLCRAN 465
I T++++I+ + N
Sbjct: 688 I-TWSILINYFVKNN 701
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 84/384 (21%), Positives = 163/384 (42%), Gaps = 45/384 (11%)
Query: 59 VDSPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKS 116
+ +P + +I+ V +E L ++ V +P + N +I K S
Sbjct: 331 IPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVS 390
Query: 117 ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAK-- 173
AL G+E + Y +++D K ++ ++ MS KG ++LNT+
Sbjct: 391 ALEFLDEMVK-KGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKG--LSLNTVGYNC 447
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSC 232
++ G+ +DA++ + E+ + G + + T N L+ LCK K+E A ++ + L
Sbjct: 448 LIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEG 507
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGC------------------------ 268
+ N T+N IH + ++ + +A + EM+ GC
Sbjct: 508 VIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCL 567
Query: 269 -----------HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
P + S + +I S+CR + + L +M +G P++VTY ++++ L
Sbjct: 568 GLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGL 627
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
K G F+EA+ + ++ G PD+ +N LI +A + + NG P+
Sbjct: 628 CKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLL-FKGVSNGFIPN 686
Query: 378 TSTFNTMITMFSHHGHHEKAFHVL 401
T++ +I F + + F +L
Sbjct: 687 EITWSILINYFVKNNSDSEQFTIL 710
>gi|356546852|ref|XP_003541836.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Glycine max]
Length = 481
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 112/428 (26%), Positives = 194/428 (45%), Gaps = 70/428 (16%)
Query: 99 SHYLVNKLIHRFKDDWKSALGIFRWAG-SCPGYEHSSEIYEMMVDILGKVRQMDQMRALL 157
+H LV ++ R + DW+ A F WA + GY+ SS++ +VDILGK+++ ++ +L
Sbjct: 66 NHDLVLDVLRRHRSDWRPAHVFFNWASKTTTGYQPSSDVCNEIVDILGKMQRFQELHQVL 125
Query: 158 EEMSKGH-IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKE 216
+EMSK ++ A ++RRF GA + ++A++ F FGLE N+E LL LC+
Sbjct: 126 DEMSKREELLDEAVFATLVRRFVGAHKVDEAIQLFYRRKEFGLELNSEAFRTLLMWLCRY 185
Query: 217 GKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISY 275
VE A ++F +K + + +N+ ++GWC + EA+
Sbjct: 186 KHVEDAEALFHNSVKKGLRADIKMWNVILNGWCVLGNSHEAK------------------ 227
Query: 276 STIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKI 335
+ ++ A C P++ TY T + L K G A+++ M
Sbjct: 228 -----------------RVWRDIVASPCKPDIFTYATFIKALTKKGKLGTALKLFRGMWD 270
Query: 336 VGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHE 395
G KPD NC+I L R+ EA+ ++ +M E G P+ +T+N++I +
Sbjct: 271 KGGKPDVVICNCIIDALCFKKRIPEALEIF-CDMSERGCEPNVATYNSLIKYMCKIQRMK 329
Query: 396 KAFHVLEEM-NKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLL-------DDMVN---- 443
K + +++EM K C PN T+ LLKS + G+ L ++ DD+ N
Sbjct: 330 KVYELVDEMERKKGSCLPNAVTYCYLLKSLKEPGEVCRVLERMERNGCGMNDDVYNMVLR 389
Query: 444 -------------------KHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
++ D +YT++IH + + A +EMI + P
Sbjct: 390 LYMKWDDGDGVRKTWEEMERNGWGPDRRSYTIMIHENFEKGRVKDAVRYLEEMISKGMVP 449
Query: 485 RYQTCRLI 492
+T +L+
Sbjct: 450 ERRTEKLV 457
>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
Length = 794
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 197/423 (46%), Gaps = 24/423 (5%)
Query: 82 EVFQSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEI--Y 137
+VF+SL + + P+HY N L+H K AL + G+ S ++ Y
Sbjct: 196 DVFRSL----IALRLHPNHYTFNLLVHTHCSKGTLADALSTL---STMQGFGLSPDVVTY 248
Query: 138 EMMVDILGKVRQMDQMRALLEEMSKGHIV----TLNTIAKVMRRFSGAGQWEDAVRTFDE 193
++ + + + R LL M K I T NT+ R G + A +
Sbjct: 249 NTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARL---GWIKQATNVVEA 305
Query: 194 LGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK--SCIPPNAHTFNIFIHGWCKIN 251
+ FG E + T N+L LC+ GKV+ A + E++ S + P+ T+N + K
Sbjct: 306 MTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQ 365
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
R +A ++EM+ G +++++ +++ CR+ + L M +G P+V+TY
Sbjct: 366 RSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYN 425
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
T++ K+ + +A + ++M G K D+ N L+Y L + R +EA + + P+
Sbjct: 426 TLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSP-PQ 484
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
G PD ++ T++ + E A ++ +EM+K P++ T++ L+K GK
Sbjct: 485 RGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSK-RKLTPSIYTYNTLIKGLCTIGKLT 543
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRL 491
E + +L + M K L D TTY ++IH C+ E A+ +M+ + P TC
Sbjct: 544 EAIDKLNELM--KKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNT 601
Query: 492 ILD 494
+++
Sbjct: 602 LMN 604
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 142/274 (51%), Gaps = 3/274 (1%)
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYEL 294
PN +TFN+ +H C + +A T+ M+G G P V++Y+T+++++CR+ + L
Sbjct: 208 PNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTL 267
Query: 295 LDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGR 354
L M+ +G P TY T++S A+ G ++A + E M G +PD +N L L +
Sbjct: 268 LARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQ 327
Query: 355 ASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNV 414
A +V EA + + V+PD T+NT++ + A ++LEEM + K ++
Sbjct: 328 AGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRD-KGVKSSL 386
Query: 415 QTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLF 474
T + ++K + G+ +E L +L M+ + L+ D+ TY +I C+A A++L
Sbjct: 387 VTHNIVVKGLCREGQLEEALGRL--KMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLM 444
Query: 475 KEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
EM+ + T +L + ++ Y+ AE++
Sbjct: 445 DEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEEL 478
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 164/350 (46%), Gaps = 17/350 (4%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++D K R + + L++EM + + TLNT+ + ++E+A
Sbjct: 424 YNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTL---LYNLCKEKRYEEAEELLR 480
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKIN 251
G + + ++ KE K E A ++ E+ K + P+ +T+N I G C I
Sbjct: 481 SPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIG 540
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
++ EA + E+ G P +Y+ II +YC++ + K ++ ++M P+VVT
Sbjct: 541 KLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCN 600
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
T+M+ L G E+AI++ E G K D +N LI L + V A++ + +M
Sbjct: 601 TLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFF-ADMEA 659
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC---FKTG 428
G+ PD T+N +++ S G E+A ++L +++ E K + + +PL+KS KTG
Sbjct: 660 RGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLD--ESGKLSERFSYPLIKSSAEEVKTG 717
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
K E S D + D +Y + LC + + A + EM+
Sbjct: 718 KDPEVKS---DCESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLDEMM 764
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 125/464 (26%), Positives = 211/464 (45%), Gaps = 54/464 (11%)
Query: 82 EVFQSLKQDHVCNAIQPSHYLVNKLI--HRFKDDWKSALGIFRWAGSCPGYEHSSEIYEM 139
E F ++K+ V I+ + L++ + +R + W +FR + S + +
Sbjct: 172 ECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLR-----IKSSVYTFNI 226
Query: 140 MVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIA----------------KVMRR-- 177
M+++L K ++ + + + M K +IVT NTI M+R
Sbjct: 227 MINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQK 286
Query: 178 -----------FSG---AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELAR 223
SG G+ E+A + F+E+ GL + N L+D C +G +++A
Sbjct: 287 IEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMAS 346
Query: 224 SVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSY 282
+ E LK I P T+N IH R DEA+ I+E++ G P I+Y+ +I Y
Sbjct: 347 AYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGY 406
Query: 283 CRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDS 342
CR N K + L DEM A G P TYT+++ L+K +EA + +K+ G PD
Sbjct: 407 CRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDV 466
Query: 343 RFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLE 402
FN LI S V+ A + + +M V PD TFNT++ G E+A + +
Sbjct: 467 IMFNALIDGHCSNSNVKGAFELLK-DMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFD 525
Query: 403 EMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL---SQLLDDMVNKHHLSLDITTYTLVIH 459
EM K KP+ +F+ L+ + G + +++LD N + TY ++
Sbjct: 526 EM-KRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNP-----TVLTYNALVQ 579
Query: 460 GLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYD 503
GLC+ + + A L KEM+ +TP T +++ + + ++ D
Sbjct: 580 GLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPD 623
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 57/116 (49%), Gaps = 8/116 (6%)
Query: 149 QMDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTE 204
++++ R L +EM + I ++ NT+ + +S G +DA R +E+ G
Sbjct: 516 KVEEARELFDEMKRRGIKPDHISFNTL---ISGYSRRGDIKDAFRVRNEMLDTGFNPTVL 572
Query: 205 TMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWT 259
T N L+ LCK + +LA + E+ S + P+ T+ I G K+N DE + T
Sbjct: 573 TYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDENKNT 628
>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 543
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 162/325 (49%), Gaps = 13/325 (4%)
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCI 233
++++ G+ DA R + LG T N +++ C+ G ++ AR + +
Sbjct: 102 LIKKLCADGRVADAERVVEALGP---SATIITYNTMVNGYCRAGNIDAARRMIDSVP--F 156
Query: 234 PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
P+ T+N I C V +A +M GC P V++YS ++ + C++ + +
Sbjct: 157 APDTFTYNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVV 216
Query: 294 LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLG 353
LLDEM+++GC P++VTY +++ + GD EA+++ + G KPD+ + ++ +L
Sbjct: 217 LLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLC 276
Query: 354 RASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH-CKP 412
+ R +EA + +M N APD TFN +IT G +A VL +M+ EH C P
Sbjct: 277 SSERWEEADKLL-TKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMS--EHGCTP 333
Query: 413 NVQTFHPLLKSCFKTGKTDEC---LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEW 469
++ T+ ++ K + DE L +LL +MV+K+ + D T+ +I LC+ +
Sbjct: 334 DIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIP-DQVTFNTIITSLCQKGLFDR 392
Query: 470 AYLLFKEMIGHDITPRYQTCRLILD 494
A + EM H P T I+D
Sbjct: 393 AIKVVDEMSEHGCIPDITTYNCIVD 417
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 177/363 (48%), Gaps = 23/363 (6%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKG---HIVTLNTIAKVMRRFSGAGQW 184
G S Y +++D K Q LL+EM SKG IVT N + M G
Sbjct: 190 GCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAM---CSQGDV 246
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS--CIPPNAHTFNI 242
+A++ + L ++G + + T +L +LC + E A + ++ S C P+ TFN
Sbjct: 247 GEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDC-APDEVTFNA 305
Query: 243 FIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSK----VYELLDEM 298
I C+ V A + +M HGC P +I+YS+I+ C++ + + ELL EM
Sbjct: 306 VITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEM 365
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYT-LGRASR 357
++ C P+ VT+ T+++ L + G F+ AI++ ++M G PD +NC++ L ++ +
Sbjct: 366 VSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCK 425
Query: 358 VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTF 417
+EA+ + + M NG+ PDT+T+ ++ S E+A + + + P+ +
Sbjct: 426 TEEALDLLNL-MVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAM-GLSPDKMLY 483
Query: 418 HPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
+ +L K +TD + MV+ + D +TY +++ G+ E A KE+
Sbjct: 484 NAILLGLCKKWRTDLAI-DFFAYMVSNGCMP-DESTYIILVEGIAYEGFLEEA----KEL 537
Query: 478 IGH 480
+G+
Sbjct: 538 LGN 540
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 162/383 (42%), Gaps = 40/383 (10%)
Query: 55 QVLCVDSPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCN-----------------AIQ 97
+ LCV L + V +H G S V S+ D C +
Sbjct: 168 RALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCE 227
Query: 98 PSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGY--EHSSEIYEMMVDILGKVRQMDQM 153
P N LI+ + D AL + S P Y + + Y ++ L + ++
Sbjct: 228 PDIVTYNVLINAMCSQGDVGEALKVLN---SLPSYGCKPDAVTYTPVLKSLCSSERWEEA 284
Query: 154 RALLEEMSKGHI----VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLL 209
LL +M VT N + + + G+ A + ++ G + T + +
Sbjct: 285 DKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGR---ATKVLAQMSEHGCTPDIITYSSI 341
Query: 210 LDTLCKEGKVELARSVFLEL------KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
+D LCKE +V+ A + EL K+CIP + TFN I C+ D A + EM
Sbjct: 342 MDGLCKERRVDEAIKLLKELLAEMVSKNCIP-DQVTFNTIITSLCQKGLFDRAIKVVDEM 400
Query: 264 KGHGCHPCVISYSTIIQSY-CRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGD 322
HGC P + +Y+ I+ + C+ + +LL+ M + G P+ TY ++ L++ +
Sbjct: 401 SEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDE 460
Query: 323 FEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFN 382
E AI + +++ +G PD +N ++ L + R A+ + M NG PD ST+
Sbjct: 461 MERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAY-MVSNGCMPDESTYI 519
Query: 383 TMITMFSHHGHHEKAFHVLEEMN 405
++ ++ G E+A +L ++
Sbjct: 520 ILVEGIAYEGFLEEAKELLGNLS 542
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 142/338 (42%), Gaps = 51/338 (15%)
Query: 176 RRFSGA---GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC 232
RR G G+ + A+R + G + N+L+ LC +G+V A V L
Sbjct: 66 RRLRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEALG-- 123
Query: 233 IPPNAH--TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSK 290
P+A T+N ++G+C+ +D A+ I + P +Y+ +I++ C +
Sbjct: 124 --PSATIITYNTMVNGYCRAGNIDAARRMIDSVPFA---PDTFTYNPLIRALCVRGCVLD 178
Query: 291 VYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIY 350
+ D+M +GC P+VVTY+ ++ K +++A+ + ++M+
Sbjct: 179 ALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMR---------------- 222
Query: 351 TLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHC 410
G PD T+N +I G +A VL + C
Sbjct: 223 --------------------SKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSY-GC 261
Query: 411 KPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWA 470
KP+ T+ P+LKS + + +E +LL M + + + D T+ VI LC+ A
Sbjct: 262 KPDAVTYTPVLKSLCSSERWEEA-DKLLTKMFS-NDCAPDEVTFNAVITSLCQKGFVGRA 319
Query: 471 YLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+ +M H TP T I+D + ++ D A K+
Sbjct: 320 TKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKL 357
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 130/283 (45%), Gaps = 12/283 (4%)
Query: 234 PP--NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKV 291
PP + N + G + +D A + + G G P VI + +I+ C +V
Sbjct: 56 PPARSGGGANRRLRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCAD---GRV 112
Query: 292 YELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYT 351
+ ++A G ++TY T+++ ++G+ + A R+ + + PD+ +N LI
Sbjct: 113 ADAERVVEALGPSATIITYNTMVNGYCRAGNIDAARRMIDSVPFA---PDTFTYNPLIRA 169
Query: 352 LGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCK 411
L V +A+ V+ +M G +P T++ ++ +++A +L+EM + + C+
Sbjct: 170 LCVRGCVLDALAVFD-DMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEM-RSKGCE 227
Query: 412 PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAY 471
P++ T++ L+ + G E L L + + + D TYT V+ LC + + E A
Sbjct: 228 PDIVTYNVLINAMCSQGDVGEALKVL--NSLPSYGCKPDAVTYTPVLKSLCSSERWEEAD 285
Query: 472 LLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
L +M +D P T ++ + QK A K+ A M +
Sbjct: 286 KLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSE 328
>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 793
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 115/448 (25%), Positives = 213/448 (47%), Gaps = 11/448 (2%)
Query: 63 RLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFR 122
R P + + + + S+ + F+ + H+ +++P LV ++ R + D + AL F
Sbjct: 133 RHPVVREVCRLITLSSAWNPNFEG-RLRHLLRSLKPP--LVCAVL-RSQADERVALNFFY 188
Query: 123 WAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVMRRFSGA 181
WA Y H +Y M+D+L K + R +L M++ I VM +S A
Sbjct: 189 WADRQWRYSHHPVVYYTMLDVLSKTKLCQGARRVLRLMTRRGIECPPEAFGYVMVSYSRA 248
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTF 240
G+ +A+R + G+E + N + L K GK+E A ++ + I P+ T+
Sbjct: 249 GKLRNALRVLTLMQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTY 308
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM-Q 299
N I G+C +NR+++A I + GC P +SY T++ C++ +V L+++M
Sbjct: 309 NSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVW 368
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
P+ VTY T++ L+K G ++A+ ++ + G D ++ ++++ + R+
Sbjct: 369 NSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMD 428
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
EA + ++M G PD T+ ++ F G ++A +L++M K CKPN ++
Sbjct: 429 EAKSLV-IDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYK-HGCKPNTVSYTA 486
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
LL +GK+ E + ++ +H + + TY V+HGL R K A L +EM+
Sbjct: 487 LLNGLCHSGKSLEAREMI--NVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVE 544
Query: 480 HDITPRYQTCRLILDEVKQKHMYDAAEK 507
P L++ + Q A+K
Sbjct: 545 KGFFPTPVEINLLIQSLCQNQKVVEAKK 572
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 115/451 (25%), Positives = 212/451 (47%), Gaps = 36/451 (7%)
Query: 65 PDIDVIISKVHV---GSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIF 121
P + + + ++V G ++ + L++ V I+P N LI + D + +
Sbjct: 268 PSLSICNTTIYVLVKGGKLEKALKFLERMQV-TGIKPDIVTYNSLIKGYCDLNRIEDALE 326
Query: 122 RWAG----SCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGH-----IVTLNTIA 172
AG CP + S Y ++ L K +++++++ L+E+M VT NT+
Sbjct: 327 LIAGLPSKGCPPDKVS---YYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLI 383
Query: 173 KVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--K 230
++ S G +DA+ E G + + ++ + C++G+++ A+S+ +++ +
Sbjct: 384 HML---SKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSR 440
Query: 231 SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSK 290
C P+ T+ + G+C++ R+DEA+ +Q+M HGC P +SY+ ++ C +
Sbjct: 441 GC-NPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLE 499
Query: 291 VYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIY 350
E+++ + PN +TY VM L + G EA +T +M G P N LI
Sbjct: 500 AREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQ 559
Query: 351 TLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHC 410
+L + +V EA Y E G A + F T+I F G E A VL++M L
Sbjct: 560 SLCQNQKVVEA-KKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDM-YLSGK 617
Query: 411 KPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT--TYTLVIHGLCRANKCE 468
P+ T+ L + K G+ DE ++L+ M++K LD T TY VIH + + +
Sbjct: 618 HPDAVTYTALFDALGKKGRLDEA-AELIVKMLSK---GLDPTPVTYRSVIHRYSQWGRVD 673
Query: 469 WAYLLFKEMIGHDITPRYQTCRLILDEVKQK 499
L ++M+ + Q R + ++V +K
Sbjct: 674 DMLNLLEKML------KRQPFRTVYNQVIEK 698
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 183/393 (46%), Gaps = 14/393 (3%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQW 184
G E S I + +L K ++++ LE M K IVT N++ K + +
Sbjct: 265 GVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIK---GYCDLNRI 321
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNI 242
EDA+ L + G + + ++ LCKE K+E + + ++ S + P+ T+N
Sbjct: 322 EDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNT 381
Query: 243 FIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
IH K D+A ++E + G H + YS I+ S+C++ + L+ +M ++G
Sbjct: 382 LIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRG 441
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
C P+VVTYT ++ + G +EA +I ++M G KP++ + L+ L + + EA
Sbjct: 442 CNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAR 501
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLK 422
+ V E+ P+ T+ ++ G +A + EM + + P + L++
Sbjct: 502 EMINVS-EEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVE-KGFFPTPVEINLLIQ 559
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
S + K E + L++ +NK ++++ +T VIHG C+ E A + +M
Sbjct: 560 SLCQNQKVVEA-KKYLEECLNKG-CAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGK 617
Query: 483 TPRYQTCRLILDEVKQKHMYD-AAEKIEAVMKK 514
P T + D + +K D AAE I ++ K
Sbjct: 618 HPDAVTYTALFDALGKKGRLDEAAELIVKMLSK 650
>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 966
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 117/462 (25%), Positives = 201/462 (43%), Gaps = 67/462 (14%)
Query: 93 CNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSC---PGY----------------- 130
CN PS L N L+H + +D+ A +F +C PGY
Sbjct: 337 CN---PSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELP 393
Query: 131 -----EHSSEIYEMMVD---ILGKVRQMDQMRALL-------------EEMSKGHIVTLN 169
+ + ++YE M+ +L K+ + R L E M KG + +
Sbjct: 394 NPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDAS 453
Query: 170 TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL 229
T KV+ A + + A F E+ G+ + T +L+D+ CK G +E A+S F E+
Sbjct: 454 TYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEM 513
Query: 230 KSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
+S PN T+ +H + K ++ +A M G C+P I+YS +I C+
Sbjct: 514 RSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEI 573
Query: 289 SKVYELLDEM----------------QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEK 332
K E+ ++ PNVVTY +++ L K+ +A + +
Sbjct: 574 QKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDA 633
Query: 333 MKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
M G +P+ ++ L+ + + A V+ + M + G P T+ ++I G
Sbjct: 634 MLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVF-LRMTKCGYLPSVHTYTSLIDRMFKDG 692
Query: 393 HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
+ A VL +M K + C PNV T+ ++ KTG+T++ L+ L ++ K S ++
Sbjct: 693 RLDLAMKVLSQMLK-DSCNPNVVTYTAMVDGLCKTGETEKALNLL--SLMEKKGCSPNVV 749
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
TYT +I GL +A K + LF +M P Y T R++++
Sbjct: 750 TYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILIN 791
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 173/404 (42%), Gaps = 70/404 (17%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDA 187
GY S+ Y +V +L Q++ + +EMS G + +T+ + G+W DA
Sbjct: 199 GYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFAQALCKEGRWGDA 258
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCI--------PPNAHT 239
+ LE+ ++ +L T G +E S+F E S + PN T
Sbjct: 259 LDL--------LEREDFKLDTVLCTQMISGLME--ASLFNEAMSFLHRMRCNSYIPNVVT 308
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+ + G+ K ++ + I M GC+P +++++ +YC +++ Y+L + M
Sbjct: 309 YRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMN 368
Query: 300 AQGCPPNVVTYTTVMSY-----------------------------------------LA 318
GCPP V Y + L
Sbjct: 369 TCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLC 428
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDT 378
G FE+A +I ++M G PD+ + +I L +A RV +A ++Q EM + GV PD
Sbjct: 429 GVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQ-EMKKVGVNPDV 487
Query: 379 STFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG---KTDECLS 435
T+ +I F G E+A +EM + C PNV T+ LL + K+ + ++
Sbjct: 488 YTYTILIDSFCKAGLIEQAQSWFDEM-RSAGCSPNVVTYTALLHAYLKSKQLYQANDIFH 546
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
+++ D + + TY+ +I GLC+A + + A ++ ++IG
Sbjct: 547 RMVGDACYPNAI-----TYSALIDGLCKAGEIQKACEVYAKLIG 585
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 145/319 (45%), Gaps = 10/319 (3%)
Query: 170 TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL 229
T ++ A + DA D + G E N + L+D CK G+++ A+ VFL +
Sbjct: 610 TYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRM 669
Query: 230 KSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
C P+ HT+ I K R+D A + +M C+P V++Y+ ++ C+
Sbjct: 670 TKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGET 729
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
K LL M+ +GC PNVVTYT ++ L K+G + + + +MK G P+ + L
Sbjct: 730 EKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRIL 789
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
I A+ + + ++ EM + + T + FS + +LEEM
Sbjct: 790 INHCC-AAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSK--RFLASLGLLEEMES-H 845
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT---YTLVIHGLCRAN 465
P + L+ S K G+ + L +L +M+ SL++ + +T +I LC ++
Sbjct: 846 DTAPIAPVYGMLIDSFSKAGRLETAL-ELHKEMMEVSS-SLNMASKDMHTSLIQALCLSS 903
Query: 466 KCEWAYLLFKEMIGHDITP 484
+ E A L+ EM I P
Sbjct: 904 QVEEAVALYSEMRRRGIVP 922
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 147/347 (42%), Gaps = 23/347 (6%)
Query: 189 RTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGW 247
R + + T G + N L+ T C A +F + +C PP +NIFI
Sbjct: 327 RIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSI 386
Query: 248 CKINRV------DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ 301
C + D A+ +EM C I+ + + C F K ++++ EM +
Sbjct: 387 CGREELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRK 446
Query: 302 GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
G P+ TYT V+++L ++ ++A + ++MK VG PD + LI + +A +++A
Sbjct: 447 GFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQA 506
Query: 362 VYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLL 421
+ EM G +P+ T+ ++ + +A + M + C PN T+ L+
Sbjct: 507 QSWFD-EMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVG-DACYPNAITYSALI 564
Query: 422 KSCFKTGK--------------TDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKC 467
K G+ +D S + + +S ++ TY +++GLC+A K
Sbjct: 565 DGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKV 624
Query: 468 EWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
A+ L M+ P ++D + D+A+++ M K
Sbjct: 625 SDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTK 671
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/405 (21%), Positives = 152/405 (37%), Gaps = 52/405 (12%)
Query: 120 IFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVM-RRF 178
F WA GY+H+ Y+ + ++LG LL E+ + L + V+ RR
Sbjct: 120 FFLWAERQVGYKHTGACYDALAEVLGFEDPARTAERLLREIGEDDRDVLGRLLNVLVRRC 179
Query: 179 SGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNA 237
G W +A+ L FG + T N L+ L G+VE+A V E+ S +
Sbjct: 180 CLQGLWGEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDR 239
Query: 238 HTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDE 297
T F CK E +W + LD
Sbjct: 240 STVGSFAQALCK-----EGRWG---------------------------------DALDL 261
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
++ + + V T ++S L ++ F EA+ +M+ P+ + L+ + +
Sbjct: 262 LEREDFKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQ 321
Query: 358 VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTF 417
+ + + M E G P S FN+++ + + + A+ + MN C P +
Sbjct: 322 LGWCKRIINMMMTE-GCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTC-GCPPGYVVY 379
Query: 418 HPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTL-------VIHGLCRANKCEWA 470
+ + S G+ + +LLD + K + + + + L LC K E A
Sbjct: 380 NIFIGSI--CGREELPNPELLD-LAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKA 436
Query: 471 YLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
+ + KEM+ P T ++ + Q D A + MKK+
Sbjct: 437 FQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKV 481
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 119/308 (38%), Gaps = 75/308 (24%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
G E + +Y+ +VD KV ++D + + M+K G++ +++T ++ R G+ + A
Sbjct: 638 GCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLA 697
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIH 245
++ ++ N T ++D LCK G+ E A ++ +E K C PN T+ I
Sbjct: 698 MKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGC-SPNVVTYTALID 756
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQ------------------------S 281
G K +VD +MK GC P ++Y +I
Sbjct: 757 GLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPK 816
Query: 282 YCRQY-----NFSKVY----ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE-------- 324
Y + Y FSK + LL+EM++ P Y ++ +K+G E
Sbjct: 817 YLQGYRTTVQGFSKRFLASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKE 876
Query: 325 ------------------------------EAIRITEKMKIVGSKPDSRFFNCLIYTLGR 354
EA+ + +M+ G PD F CL+ L
Sbjct: 877 MMEVSSSLNMASKDMHTSLIQALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIE 936
Query: 355 ASRVQEAV 362
++ EA+
Sbjct: 937 RNKWNEAL 944
>gi|242095336|ref|XP_002438158.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
gi|241916381|gb|EER89525.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
Length = 607
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 112/394 (28%), Positives = 188/394 (47%), Gaps = 28/394 (7%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK------GHIVTLNTIAKVMRRFSGAGQWEDAVRT 190
Y ++++ L K + +L+ MS IV LNT+ + + G+ +DA+
Sbjct: 169 YGILLNRLCKAGLVGDALKVLDRMSSPGSDVCADIVILNTVVDGLCKI---GRLQDAIVF 225
Query: 191 FDEL--GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGW 247
DE G NT T N L D C+ G +++A + + K + PN T N + G
Sbjct: 226 VDERMRQVHGCAPNTVTYNCLADACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGL 285
Query: 248 CKINRVD-------EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
C++ RV E + T E +G+ ++YST++ ++ N + EL EM
Sbjct: 286 CRVGRVGAALDFFREKRTTWLEARGNA-----VTYSTLVSAFLHCNNVALAMELFHEMAD 340
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
QG PP+ V Y T++S L ++G +A I MK G K D + +N LI R R+ E
Sbjct: 341 QGYPPDAVMYFTMISGLTQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHE 400
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
A +++ EM G+ PD T+NT+++ G +L M + C+P+V TF L
Sbjct: 401 AHQLFE-EMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMID-DGCQPSVVTFGTL 458
Query: 421 LKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH 480
+ K GKTDE L ++ M + + + Y +I LC++ + + A LF EM +
Sbjct: 459 VHGYCKAGKTDEAL-KIFRSM-GEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREN 516
Query: 481 DITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
++ T +L ++ K+M + A ++ MK+
Sbjct: 517 NVPANVTTYNALLKGLQDKNMPEKAFELMDQMKE 550
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 108/429 (25%), Positives = 191/429 (44%), Gaps = 33/429 (7%)
Query: 98 PSHYLVNKLIHRFKDDWKSALGIFR--WAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRA 155
PS L++KL+ RF +A R A P + S+ + ++ LG+ + M
Sbjct: 96 PSASLLSKLLARFSSPADAA-SFLRDSLAAGAPAPDVST--FNSLLSALGRAGNLRGMTE 152
Query: 156 LLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLE--KNTETMNLLLDT 212
L M + + + T ++ R AG DA++ D + + G + + +N ++D
Sbjct: 153 LFTSMREASVKPDIVTYGILLNRLCKAGLVGDALKVLDRMSSPGSDVCADIVILNTVVDG 212
Query: 213 LCKEGKVELARSVFL-----ELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG 267
LCK G+++ A VF+ ++ C P N T+N C++ +D A ++ M+ G
Sbjct: 213 LCKIGRLQDA-IVFVDERMRQVHGCAP-NTVTYNCLADACCRVGDIDMACQIVERMEKEG 270
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDE-----MQAQGCPPNVVTYTTVMSYLAKSGD 322
P VI+ +TI+ CR + E ++A+G N VTY+T++S +
Sbjct: 271 VTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLEARG---NAVTYSTLVSAFLHCNN 327
Query: 323 FEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFN 382
A+ + +M G PD+ + +I L +A R+ +A + M + G D +N
Sbjct: 328 VALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDACNI-AASMKKAGFKLDRKAYN 386
Query: 383 TMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG---KTDECLSQLLD 439
+I F +A + EEM K +P+V T++ LL K G DE L ++D
Sbjct: 387 ILIGGFCRKKRLHEAHQLFEEM-KGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMID 445
Query: 440 DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQK 499
D + T+ ++HG C+A K + A +F+ M I P ++D + +
Sbjct: 446 DGCQPS-----VVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKS 500
Query: 500 HMYDAAEKI 508
D A K+
Sbjct: 501 REVDVAIKL 509
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 158/346 (45%), Gaps = 47/346 (13%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK----GHIVTLNTIAKVMRRFSGAGQW 184
G ++ Y + D +V +D ++E M K +++T+NTI + R G+
Sbjct: 235 GCAPNTVTYNCLADACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRV---GRV 291
Query: 185 EDAVRTFDELGTFGLEK--NTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNA---- 237
A+ F E T LE N T + L+ V LA +F E+ PP+A
Sbjct: 292 GAALDFFREKRTTWLEARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYF 351
Query: 238 -------------------------------HTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
+NI I G+C+ R+ EA +EMKG
Sbjct: 352 TMISGLTQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGA 411
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
G P V +Y+T++ C+ +FS V ELL M GC P+VVT+ T++ K+G +EA
Sbjct: 412 GLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEA 471
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
++I M +P++ +N LI L ++ V A+ ++ EM EN V + +T+N ++
Sbjct: 472 LKIFRSMGEARIQPNTVIYNTLIDFLCKSREVDVAIKLFD-EMRENNVPANVTTYNALLK 530
Query: 387 MFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
EKAF ++++M K E C P+ T L++ + G+T+
Sbjct: 531 GLQDKNMPEKAFELMDQM-KEERCTPDYVTMDVLMEWLPEIGETER 575
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 123/292 (42%), Gaps = 7/292 (2%)
Query: 227 LELKSCIPP-NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQ 285
L + CIPP +A + + + + D A + + P V ++++++ + R
Sbjct: 87 LAARHCIPPPSASLLSKLLARFS--SPADAASFLRDSLAAGAPAPDVSTFNSLLSALGRA 144
Query: 286 YNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK--PDSR 343
N + EL M+ P++VTY +++ L K+G +A+++ ++M GS D
Sbjct: 145 GNLRGMTELFTSMREASVKPDIVTYGILLNRLCKAGLVGDALKVLDRMSSPGSDVCADIV 204
Query: 344 FFNCLIYTLGRASRVQEAVYVYQVEMPE-NGVAPDTSTFNTMITMFSHHGHHEKAFHVLE 402
N ++ L + R+Q+A+ M + +G AP+T T+N + G + A ++E
Sbjct: 205 ILNTVVDGLCKIGRLQDAIVFVDERMRQVHGCAPNTVTYNCLADACCRVGDIDMACQIVE 264
Query: 403 EMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC 462
M K E PNV T + ++ + G+ L + + TY+ ++
Sbjct: 265 RMEK-EGVTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLEARGNAVTYSTLVSAFL 323
Query: 463 RANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
N A LF EM P ++ + Q A I A MKK
Sbjct: 324 HCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDACNIAASMKK 375
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 67/146 (45%), Gaps = 8/146 (5%)
Query: 78 SSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKS--ALGIFRWAGSCPGYEHSSE 135
S+ DE+ ++ D QPS L+H + K+ AL IFR G + ++
Sbjct: 434 SAVDELLGNMIDD----GCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEA-RIQPNTV 488
Query: 136 IYEMMVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
IY ++D L K R++D L +EM + ++ + T +++ E A D++
Sbjct: 489 IYNTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAFELMDQM 548
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVE 220
+ TM++L++ L + G+ E
Sbjct: 549 KEERCTPDYVTMDVLMEWLPEIGETE 574
>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
Length = 793
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 131/513 (25%), Positives = 227/513 (44%), Gaps = 58/513 (11%)
Query: 14 IPLNPLTSRIRFHSSSENCSHIVSSSPIESYCSDGA-------RLDH--HQVL------- 57
+PL+PL R H+++S P S +D A RL H Q+L
Sbjct: 117 VPLDPLRHLHR---------HLLASFPT-SALADAALSTYARLRLPHLAAQLLHSFRRRG 166
Query: 58 CVDSPRLPDIDVIISKVHVGSSED-----EVFQSLKQDHVCNAIQPSHYLVNKLIHR--- 109
CV P L + ++S + S + F SL + + P+HY N L+H
Sbjct: 167 CV-RPSLQAANAVLSALARSPSTSPQASLDAFHSL----IALRLHPNHYTFNLLVHTHCS 221
Query: 110 --FKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIV- 166
D S L + G P + Y +++ + + + R LL M K IV
Sbjct: 222 KGTLADALSTLSKMQGFGLSP----DAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVP 277
Query: 167 ---TLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELAR 223
T NT+ R Q D V + + FG E + T N+L LC+ GKV+ A
Sbjct: 278 TRATYNTLVSAYARLGWIKQATDVV---EAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAF 334
Query: 224 SVFLELK--SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQS 281
+ E++ + P+ T+N + K R +A ++EM+ G +++++ I++
Sbjct: 335 KLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKG 394
Query: 282 YCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPD 341
CR+ + L+ M +G P+V+TY T++ K+G+ +A + ++M G K D
Sbjct: 395 LCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMD 454
Query: 342 SRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVL 401
+ N L+Y L + R +EA + + P+ G PD ++ T++ + E A +
Sbjct: 455 TFTLNTLLYNLCKEKRYEEAEELLRAP-PQRGFVPDEVSYGTVMAAYFKEYKPEPALCLW 513
Query: 402 EEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGL 461
+EM K P++ T++ L+K GK E + +L + M + L D TTY ++IH
Sbjct: 514 DEMIK-RKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELM--EMGLVPDDTTYNIIIHAY 570
Query: 462 CRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
C+ E A+ +M+ + P TC +++
Sbjct: 571 CKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMN 603
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 146/275 (53%), Gaps = 5/275 (1%)
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYEL 294
PN +TFN+ +H C + +A T+ +M+G G P ++Y+T++ ++CR+ + L
Sbjct: 207 PNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTL 266
Query: 295 LDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGR 354
L M+ +G P TY T++S A+ G ++A + E M G +PD +N L L +
Sbjct: 267 LARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQ 326
Query: 355 ASRVQEAVYVYQVEMPENG-VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPN 413
A +V EA + + EM + G V+PD T+NT++ A ++LEEM + + K +
Sbjct: 327 AGKVDEA-FKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMRE-KGVKSS 384
Query: 414 VQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLL 473
+ T + ++K + G+ +E L +L +M+ + L+ D+ TY +I C+A A++L
Sbjct: 385 LVTHNIIVKGLCREGQLEEALGRL--EMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVL 442
Query: 474 FKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
EM+ + T +L + ++ Y+ AE++
Sbjct: 443 MDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEEL 477
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 173/393 (44%), Gaps = 52/393 (13%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK----GHIVTLNTIAKVMRRFSGAGQW 184
G + S + ++V L + Q+++ LE M++ ++T NT+ + AG
Sbjct: 380 GVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCK---AGNV 436
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSV------------------- 225
A DE+ GL+ +T T+N LL LCKE + E A +
Sbjct: 437 AKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTV 496
Query: 226 ----FLE-------------LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGC 268
F E +K + P+ T+N I G + ++ EA + E+ G
Sbjct: 497 MAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGL 556
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
P +Y+ II +YC++ + K ++ ++M P+VVT T+M+ L G E+A++
Sbjct: 557 VPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMK 616
Query: 329 ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF 388
+ E G K D +N LI L + + V A+ + +M G+ PD T+N +++
Sbjct: 617 LFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFF-ADMEVRGLQPDVFTYNVLLSAL 675
Query: 389 SHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS---CFKTGKTDECLSQLLDDMVNKH 445
S G +A +L ++N E K + F+P +KS +TGK E S ++ + N
Sbjct: 676 SEAGRSVEAQKMLHKLN--ESGKLYGRFFYPSIKSSVEAVETGKDPEVKSD-IESVGNTQ 732
Query: 446 HLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
D +Y I LC + + A + EM+
Sbjct: 733 --GDDQESYNKYIKELCIGGQLKEAKAVLDEMM 763
>gi|357455845|ref|XP_003598203.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355487251|gb|AES68454.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 503
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 108/399 (27%), Positives = 188/399 (47%), Gaps = 15/399 (3%)
Query: 115 KSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAK 173
K AL + ++ S P S + Y +++DI+ KV Q D L+ EM + ++ T T
Sbjct: 76 KIALSLHNFSKSLPNPPLSLQSYNLLIDIVSKVHQFDLASQLIVEMDQINLPPTPTTFFI 135
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNT-ETMNLLLDTLCKEGKVELARSVFLELKSC 232
+++R A AVR F+E+ ++ K T + LLDTLCK G V+ A +F +
Sbjct: 136 LIKRLISANLTRQAVRAFNEIESYTDTKLTSDHFTYLLDTLCKYGYVKHACELFNRNSNR 195
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF---- 288
+ + + I+GWCKI R A + EMK G P V++Y+ I+ CR+ +
Sbjct: 196 FVADVKMYTVLIYGWCKIGRFKTALSFLNEMKVKGVEPNVVTYNVILNGICRKASLHPEE 255
Query: 289 ------SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDS 342
++ DEM+ G P+V +++ V+ +++ + + MK G P+
Sbjct: 256 RFERTIRDAEKVFDEMRESGIEPDVTSFSIVLHVYSRAHKPQLVLDKLGLMKEKGICPNV 315
Query: 343 RFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLE 402
+ +I L R++EA + EM NGV+P +T+N + +KA +
Sbjct: 316 VTYTSVIKCLCSCGRIEEAEDLID-EMVRNGVSPCAATYNCFFKEYRGRKDADKALKFFK 374
Query: 403 EMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC 462
+M + C+P T+ L+ + F + ++ +DM+ + + D+ +YT++IHGLC
Sbjct: 375 KMKEDGLCEPTTHTYGVLI-AMFLKADMIGVVKEIWNDMM-ESGVGPDLDSYTVLIHGLC 432
Query: 463 RANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHM 501
+ K A F EMI P+ T + + Q M
Sbjct: 433 ESKKWREACQYFVEMIEKGFLPQKVTFETLYRGLIQSDM 471
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 126/322 (39%), Gaps = 50/322 (15%)
Query: 204 ETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQE 262
++ NLL+D + K + +LA + +E+ +PP TF I I N +A E
Sbjct: 96 QSYNLLIDIVSKVHQFDLASQLIVEMDQINLPPTPTTFFILIKRLISANLTRQAVRAFNE 155
Query: 263 MKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGD 322
++ + + T + +Y + K L + +V YT ++ K G
Sbjct: 156 IESYTDTKLTSDHFTYLLDTLCKYGYVKHACELFNRNSNRFVADVKMYTVLIYGWCKIGR 215
Query: 323 FEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR----------VQEAVYVYQVEMPEN 372
F+ A+ +MK+ G +P+ +N ++ + R + +++A V+ EM E+
Sbjct: 216 FKTALSFLNEMKVKGVEPNVVTYNVILNGICRKASLHPEERFERTIRDAEKVFD-EMRES 274
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
G+ PD ++F+ ++ ++S + L M + C PNV
Sbjct: 275 GIEPDVTSFSIVLHVYSRAHKPQLVLDKLGLMKEKGIC-PNV------------------ 315
Query: 433 CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLI 492
TYT VI LC + E A L EM+ + ++P T
Sbjct: 316 -------------------VTYTSVIKCLCSCGRIEEAEDLIDEMVRNGVSPCAATYNCF 356
Query: 493 LDEVKQKHMYDAAEKIEAVMKK 514
E + + D A K MK+
Sbjct: 357 FKEYRGRKDADKALKFFKKMKE 378
>gi|356531098|ref|XP_003534115.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Glycine max]
Length = 466
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 187/404 (46%), Gaps = 17/404 (4%)
Query: 95 AIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILG----KVRQM 150
I S LV +HR + D K AL F WAG Y H Y M+DIL KV+Q
Sbjct: 18 GIPLSTPLVTGGLHRLRYDEKIALRFFTWAGHQEDYSHEPCAYNDMMDILSSTRYKVKQF 77
Query: 151 DQMRALLEEMSKGH--IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTE--TM 206
+ +LE M + + +V + ++R+++ ++ ++ F + ++ E
Sbjct: 78 RIVCDVLEYMKRNNRTMVPAEVLLVILRKYTE--KYLTHMQKFAKKKRIRVKTQLEINAF 135
Query: 207 NLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
NLLLD LCK VE A S++ +++ + PNA T+NI + GWC++ ++EM
Sbjct: 136 NLLLDALCKCCLVEDAESLYKKMRKTVKPNAETYNILVFGWCRVRNPTRGMKLLEEMIEL 195
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG---CPPNVVTYTTVMSYLAKSGDF 323
G P +Y+T I +YC+ ++ +L + M+ +G P TY ++ LA+
Sbjct: 196 GHRPDNFTYNTAIDTYCKTGMITEAVDLFEFMRTKGSTISSPTAKTYAIIIVALAQHDRM 255
Query: 324 EEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNT 383
E+ ++ M G PD + +I + ++ EA Y + EM PD T+N
Sbjct: 256 EDCFKLIGHMISSGCLPDVTTYKEIIEGMCMCGKIDEA-YKFLEEMGNKSYRPDIVTYNC 314
Query: 384 MITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVN 443
+ + + E A + M +L +C P+VQT++ L+ F+ D + ++
Sbjct: 315 FLKVLCDNKKSEDALKLYGRMIEL-NCIPSVQTYNMLISMFFEMDDPDGAFETWQE--ID 371
Query: 444 KHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
D TY ++I GL NK E A L +E+I + Y+
Sbjct: 372 NRGCRPDTDTYCVMIEGLFNCNKMEDACFLLEEVINEGVKLPYK 415
>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
Length = 375
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 94/309 (30%), Positives = 158/309 (51%), Gaps = 5/309 (1%)
Query: 205 TMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
T +L++ C E V A + E+ S P+ T+N+ ++G CK R+DEA + M
Sbjct: 18 TYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFLNSM 77
Query: 264 KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF 323
+G P VI+++ I++S C + +LL EM +GC P+VVT+ ++++L + G
Sbjct: 78 PSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRKGLL 137
Query: 324 EEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNT 383
AI I EKM G P+S +N L++ + ++ A+ ++ M G PD T+NT
Sbjct: 138 GRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEI-MVSRGCYPDIVTYNT 196
Query: 384 MITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVN 443
M+T G + A +L +++ + C P + T++ ++ K GKTD+ + +LL +M
Sbjct: 197 MLTALCKDGKVDAAVELLNQLSS-KGCSPVLITYNTVIDGLSKVGKTDQAV-ELLHEMRG 254
Query: 444 KHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYD 503
K L D+ TY+ +I GL R K E A F ++ G + P T I+ + + D
Sbjct: 255 K-GLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTD 313
Query: 504 AAEKIEAVM 512
A A M
Sbjct: 314 RAIDFLAYM 322
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 168/313 (53%), Gaps = 11/313 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM----SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++V+ + K ++D+ L M S+ +++T N I +R G+W DA +
Sbjct: 54 YNVLVNGMCKEGRLDEAIKFLNSMPSYGSQPNVITHNII---LRSMCSTGRWMDAEKLLT 110
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKIN 251
E+ G + T N+L++ LC++G + A + ++ + PN+ ++N +HG+CK
Sbjct: 111 EMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEK 170
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
++D A ++ M GC+P +++Y+T++ + C+ ELL+++ ++GC P ++TY
Sbjct: 171 KMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYN 230
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
TV+ L+K G ++A+ + +M+ G KPD ++ LI L R +V+EA+ + ++
Sbjct: 231 TVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFH-DVEG 289
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
GV P+ T+N+++ ++A L M + CKP ++ L++ G
Sbjct: 290 FGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMIS-KGCKPTEVSYTILIEGIANEGLAK 348
Query: 432 ECLSQLLDDMVNK 444
E L +LL+++ ++
Sbjct: 349 EAL-ELLNELCSR 360
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 174/361 (48%), Gaps = 10/361 (2%)
Query: 150 MDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLL 209
M+ + LE+ ++T + + SG GQ A++ DE+G+ G + + T N+L
Sbjct: 1 MEVLDRQLEKECYPDVITYTILIEATCAESGVGQ---AMKLLDEMGSRGCKPDVVTYNVL 57
Query: 210 LDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGC 268
++ +CKEG+++ A + S PN T NI + C R +A+ + EM GC
Sbjct: 58 VNGMCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGC 117
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
P V++++ +I CR+ + ++L++M GC PN ++Y ++ K + AI+
Sbjct: 118 SPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQ 177
Query: 329 ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF 388
E M G PD +N ++ L + +V AV + ++ G +P T+NT+I
Sbjct: 178 YLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLN-QLSSKGCSPVLITYNTVIDGL 236
Query: 389 SHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
S G ++A +L EM + + KP+V T+ L+ + GK +E + D V +
Sbjct: 237 SKVGKTDQAVELLHEM-RGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHD--VEGFGVK 293
Query: 449 LDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+ TY ++ GLC+A + + A MI P + ++++ + + + A E +
Sbjct: 294 PNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGL--AKEAL 351
Query: 509 E 509
E
Sbjct: 352 E 352
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 126/280 (45%), Gaps = 29/280 (10%)
Query: 41 IESYCSDGARLDHHQVL-------CVDSPRLPDIDVIIS----KVHVGSSEDEVFQSLKQ 89
+ S CS G +D ++L C SP + +++I+ K +G + D + + +
Sbjct: 93 LRSMCSTGRWMDAEKLLTEMVRKGC--SPSVVTFNILINFLCRKGLLGRAID-ILEKMPT 149
Query: 90 DHVCNAIQPSHYLVNKLIHRFKDDWK-----SALGIFRWAGSCPGYEHSSEIYEMMVDIL 144
H C P+ N L+H F + K L I G P Y M+ L
Sbjct: 150 -HGCT---PNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIV----TYNTMLTAL 201
Query: 145 GKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNT 203
K ++D LL ++S KG L T V+ S G+ + AV E+ GL+ +
Sbjct: 202 CKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDV 261
Query: 204 ETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQE 262
T + L+ L +EGKVE A F +++ + PNA T+N + G CK + D A +
Sbjct: 262 ITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAY 321
Query: 263 MKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
M GC P +SY+ +I+ + + ELL+E+ ++G
Sbjct: 322 MISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRG 361
>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 118/482 (24%), Positives = 212/482 (43%), Gaps = 74/482 (15%)
Query: 98 PSHYLVNKLIHRF--KDDWKSALGIFRWAGSC---PGYEHSSEIYEMMV-------DILG 145
PS+ + N L+H + DD+ A + + C PGY +Y +++ ++ G
Sbjct: 376 PSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYV----VYNILIGSICSGGELPG 431
Query: 146 KVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTET 205
V +A E +S G ++ + R G G++E A + E+ G +T T
Sbjct: 432 PVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTST 491
Query: 206 MNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
+ ++ LC +VE A +F E+K + + P+ +T+ I I + K + +A + EM
Sbjct: 492 YSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMV 551
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
GC P V++Y+T+I +Y + S EL + M A+GC PNV+TYT ++ KSG+ E
Sbjct: 552 RDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIE 611
Query: 325 EAIRITEKMK-------------------------------------------------- 334
+A +I +M+
Sbjct: 612 KACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETM 671
Query: 335 -IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
+ G +P++ ++ LI +A+++ EA V+ +M E G P+ T++++I
Sbjct: 672 FVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFH-KMVERGYNPNVYTYSSLIDRLFKDKR 730
Query: 394 HEKAFHVLEEMNKLEH-CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
+ VL +M LE+ C PN+ + ++ K KTDE +L M+ + ++
Sbjct: 731 LDLVLKVLSKM--LENSCAPNIVIYTEMIDGLSKVAKTDEAYKLML--MMEEKGCKPNVV 786
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
TYT +I G +A K + LF+EM P + T ++++ D A + M
Sbjct: 787 TYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEM 846
Query: 513 KK 514
K+
Sbjct: 847 KQ 848
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 166/357 (46%), Gaps = 20/357 (5%)
Query: 133 SSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
++E++E+M+ G + AL++ K + ++ R G D F
Sbjct: 578 ANELFELMI-AKGCFPNVITYTALIDGYCKSG--NIEKACQIYARMRGDADIPDVDMYFK 634
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKI 250
+ N T L+D LCK KV+ AR + + + C PN ++ I G+CK
Sbjct: 635 IKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGC-EPNTIVYDALIDGFCKA 693
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
++DEAQ +M G +P V +YS++I + V ++L +M C PN+V Y
Sbjct: 694 AKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIY 753
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
T ++ L+K +EA ++ M+ G KP+ + +I G+A +V + + +++ EM
Sbjct: 754 TEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFR-EMG 812
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF----K 426
G AP+ T+ +I GH ++A+ +LEEM QT+ P S + +
Sbjct: 813 SKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMK---------QTYWPKHVSSYCKVIE 863
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
K + LS L + V K+ + I Y ++I +A + E A L KE+I ++
Sbjct: 864 GYKREFILSLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALELHKEVISASMS 920
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 111/492 (22%), Positives = 191/492 (38%), Gaps = 118/492 (23%)
Query: 120 IFRWAGSCPGYEHSSEIYEMMVDI-------------LGKVRQMDQ-------------- 152
F WAG GY+H+ +Y ++D+ L ++R D+
Sbjct: 157 FFLWAGRQIGYDHTPAVYIALLDVFERGSYDRVPEEFLREIRGDDKEVLGKLLNVLIRKC 216
Query: 153 -----MRALLEEMSK----GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNT 203
LEE+ + G+ T T +++ F A + + A E+ GL +
Sbjct: 217 CRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDE 276
Query: 204 ETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
T+ LCK GK A S L K PN +N I G C+ + +EA + M
Sbjct: 277 FTLGFFAQALCKVGKWREALS--LIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRM 334
Query: 264 K-----------------------------------GHGCHPCVISYSTIIQSYCRQYNF 288
+ GC+P +++++ +YC+ +F
Sbjct: 335 RSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDF 394
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF------------------------- 323
S Y+LL +M+ C P V Y ++ + G+
Sbjct: 395 SYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNK 454
Query: 324 ----------------EEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
E+A ++ +M G PD+ ++ +I L ASRV+ A ++++
Sbjct: 455 VNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFK- 513
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKT 427
EM GV PD T+ +I FS G ++A + L+EM + + C+P V T+ L+ + K
Sbjct: 514 EMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVR-DGCEPTVVTYTTLIHAYLKA 572
Query: 428 GKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
K ++L + M+ K ++ TYT +I G C++ E A ++ M G P
Sbjct: 573 KKV-SVANELFELMIAKGCFP-NVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVD 630
Query: 488 TCRLILDEVKQK 499
I + V +K
Sbjct: 631 MYFKIKNNVAEK 642
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 102/241 (42%), Gaps = 49/241 (20%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
IY M+D L KV + D+ L+ M KG + T ++ F AG+ + + F E+
Sbjct: 752 IYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREM 811
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVD 254
G+ G N T +L++ C G ++ A ++ E+K P + +CK+
Sbjct: 812 GSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPK------HVSSYCKVIEGY 865
Query: 255 EAQWTI-----QEMKGHGCHPCVISYSTIIQSYCRQ------------------------ 285
+ ++ + +E++ +G P ++ Y +I ++ +
Sbjct: 866 KREFILSLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALELHKEVISASMSMTAKK 925
Query: 286 -------YNFS------KVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEK 332
Y+FS +EL +M G P++ T+ ++ L + +EEA+++++
Sbjct: 926 NLYTSLIYSFSYASKIDHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQLSDS 985
Query: 333 M 333
+
Sbjct: 986 L 986
>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 118/482 (24%), Positives = 213/482 (44%), Gaps = 74/482 (15%)
Query: 98 PSHYLVNKLIHRF--KDDWKSALGIFRWAGSC---PGYEHSSEIYEMMV-------DILG 145
PS+ + N L+H + DD+ A + + C PGY +Y +++ ++ G
Sbjct: 376 PSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYV----VYNILIGSICSGGELPG 431
Query: 146 KVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTET 205
V +A E +S G ++ + R G G++E A + E+ G +T T
Sbjct: 432 PVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTST 491
Query: 206 MNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
+ ++ LC +VE A +F E+K + + P+ +T+ I I + K + +A + EM
Sbjct: 492 YSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMV 551
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
GC P V++Y+T+I +Y + S EL + M A+GC PNV+TYT ++ KSG+ E
Sbjct: 552 RDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIE 611
Query: 325 EAIRITEKMK-------------------------------------------------- 334
+A +I +M+
Sbjct: 612 KACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETM 671
Query: 335 -IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
+ G +P++ ++ LI +A+++ EA V+ +M E+G P+ T++++I
Sbjct: 672 FVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFH-KMVEHGYNPNVYTYSSLIDRLFKDKR 730
Query: 394 HEKAFHVLEEMNKLEH-CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
+ VL +M LE+ C PN+ + ++ K KTDE +L M+ + ++
Sbjct: 731 LDLVLKVLSKM--LENSCAPNIVIYTEMIDGLSKVAKTDEAYKLML--MMEEKGCKPNVV 786
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
TYT +I G +A K + LF+EM P + T ++++ D A + M
Sbjct: 787 TYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEM 846
Query: 513 KK 514
K+
Sbjct: 847 KQ 848
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 167/357 (46%), Gaps = 20/357 (5%)
Query: 133 SSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
++E++E+M+ G + AL++ K + ++ R G D F
Sbjct: 578 ANELFELMI-AKGCFPNVITYTALIDGYCKSG--NIEKACQIYARMRGDADIPDVDMYFK 634
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKI 250
+ N T L+D LCK KV+ AR + + + C PN ++ I G+CK
Sbjct: 635 IKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGC-EPNTIVYDALIDGFCKA 693
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
++DEAQ +M HG +P V +YS++I + V ++L +M C PN+V Y
Sbjct: 694 AKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIY 753
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
T ++ L+K +EA ++ M+ G KP+ + +I G+A +V + + +++ EM
Sbjct: 754 TEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFR-EMG 812
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF----K 426
G AP+ T+ +I GH ++A+ +LEEM QT+ P S + +
Sbjct: 813 SKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMK---------QTYWPKHVSSYCKVIE 863
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
K + LS L + V K+ + I Y ++I +A + E A L KE+I ++
Sbjct: 864 GYKREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMS 920
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 111/492 (22%), Positives = 191/492 (38%), Gaps = 118/492 (23%)
Query: 120 IFRWAGSCPGYEHSSEIYEMMVDI-------------LGKVRQMDQ-------------- 152
F WAG GY+H+ +Y ++D+ L ++R D+
Sbjct: 157 FFLWAGRQIGYDHTPAVYIALLDVFERGSYDRVPEEFLREIRGDDKEVLGKLLNVLIRKC 216
Query: 153 -----MRALLEEMSK----GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNT 203
LEE+ + G+ T T +++ F A + + A E+ GL +
Sbjct: 217 CRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDE 276
Query: 204 ETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
T+ LCK GK A S L K PN +N I G C+ + +EA + M
Sbjct: 277 FTLGFFAQALCKVGKWREALS--LIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRM 334
Query: 264 K-----------------------------------GHGCHPCVISYSTIIQSYCRQYNF 288
+ GC+P +++++ +YC+ +F
Sbjct: 335 RSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDF 394
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF------------------------- 323
S Y+LL +M+ C P V Y ++ + G+
Sbjct: 395 SYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNK 454
Query: 324 ----------------EEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
E+A ++ +M G PD+ ++ +I L ASRV+ A ++++
Sbjct: 455 VNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFK- 513
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKT 427
EM GV PD T+ +I FS G ++A + L+EM + + C+P V T+ L+ + K
Sbjct: 514 EMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVR-DGCEPTVVTYTTLIHAYLKA 572
Query: 428 GKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
K ++L + M+ K ++ TYT +I G C++ E A ++ M G P
Sbjct: 573 KKV-SVANELFELMIAKGCFP-NVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVD 630
Query: 488 TCRLILDEVKQK 499
I + V +K
Sbjct: 631 MYFKIKNNVAEK 642
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 102/241 (42%), Gaps = 49/241 (20%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
IY M+D L KV + D+ L+ M KG + T ++ F AG+ + + F E+
Sbjct: 752 IYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREM 811
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVD 254
G+ G N T +L++ C G ++ A ++ E+K P + +CK+
Sbjct: 812 GSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPK------HVSSYCKVIEGY 865
Query: 255 EAQWTI-----QEMKGHGCHPCVISYSTIIQSYCRQ------------------------ 285
+ ++ + +E++ +G P ++ Y +I ++ +
Sbjct: 866 KREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMSMAAKK 925
Query: 286 -------YNFS------KVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEK 332
Y+FS +EL +M G P++ T+ ++ L + +EEA+++++
Sbjct: 926 NLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQLSDS 985
Query: 333 M 333
+
Sbjct: 986 L 986
>gi|299471045|emb|CBN78905.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 755
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 171/351 (48%), Gaps = 8/351 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTI--AKVMRRFSGAGQWEDAVRTFDEL 194
Y+ + G Q + LL+EM+ G V NTI + GQWE AV E+
Sbjct: 323 YDAAIKACGGGGQWETSVDLLDEMA-GRGVAPNTIHFNSAIVACGKGGQWEKAVELLREV 381
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRV 253
GL + + N + K G+ + A + E+ + + P+A ++N I K +
Sbjct: 382 TALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQW 441
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
+ A ++M G P VIS + I++ + + + ELL +M AQG PNV+TY +
Sbjct: 442 EMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSA 501
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
+ K G +E+A+ + KMK + PDS +N I + R +EAV + + EMP G
Sbjct: 502 IKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLR-EMPGQG 560
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
+ PD ++ I + +G E+A +L +M + PNV T++ ++K+C + G+ ++
Sbjct: 561 LTPDVISYTAAIDAYGKNGQWERAVELLRQM-PTKGLTPNVITYNSVIKACGRGGEWEKA 619
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
L L + + + ++ D+ +Y L I + + E A L +EM +TP
Sbjct: 620 LDLLKE--LKETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAEGLTP 668
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 162/329 (49%), Gaps = 10/329 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAK--VMRRFSGAGQWEDAVRTFDE 193
Y ++ GK Q + L +M +KG +T N I+ +R G+W++ + +
Sbjct: 428 YNSAIEACGKGGQWEMALELRRQMPTKG--LTPNVISSNIAIRACGERGRWQEGLELLRQ 485
Query: 194 LGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINR 252
+ GL N T N + T K G+ E A + ++K + P++ T+N I K R
Sbjct: 486 MPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGR 545
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
EA ++EM G G P VISY+ I +Y + + + ELL +M +G PNV+TY +
Sbjct: 546 WKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNS 605
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN 372
V+ + G++E+A+ + +++K PD +N I G+ R +EA+ + + EMP
Sbjct: 606 VIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLR-EMPAE 664
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
G+ PD ++ + I + G EKA +L M P ++ +++C K G+ +E
Sbjct: 665 GLTPDVISYTSAIRACNAEGEWEKALGLLNLMGA-HGVSPTATSYSLAIEACGKGGRREE 723
Query: 433 CLSQLLDDMVNKHHLSLDITTYTLVIHGL 461
+ L+ +M + LS + +L++ L
Sbjct: 724 AVC-LVREMAQR-GLSHRNISNSLIVEAL 750
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/434 (23%), Positives = 185/434 (42%), Gaps = 45/434 (10%)
Query: 111 KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIV---- 166
+ W+ AL + R G + Y ++ G Q + +LL EM+ +V
Sbjct: 157 QGQWEKALELLREIPEQEGVSPNVFCYNSAIEACGSGDQWEIAVSLLREMADREVVPDEI 216
Query: 167 TLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF 226
+ N+ K R GQWE + E+ + GL + T N ++ KEG+ + A SV
Sbjct: 217 SYNSAIKACGR---GGQWERVIGLLREMPSVGLTPDAITYNSVITGCGKEGQWKEALSVL 273
Query: 227 LELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQ 285
E+ + + P ++N+ I + R EA +++M+ G P VISY I++
Sbjct: 274 TEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGG 333
Query: 286 YNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFF 345
+ +LLDEM +G PN + + + + K G +E+A+ + ++ +G PD+ F
Sbjct: 334 GQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSF 393
Query: 346 NCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMN 405
N I ++ R +EA+ + + EMP + PD ++N+ I G E A + +M
Sbjct: 394 NSAIAACTKSGRWKEALELLK-EMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMP 452
Query: 406 -------------KLEHCK---------------------PNVQTFHPLLKSCFKTGKTD 431
+ C PNV T++ +K+C K G+ +
Sbjct: 453 TKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWE 512
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRL 491
+ L LL M + ++ D TY I + + + A L +EM G +TP +
Sbjct: 513 KAL-DLLAKM-KELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTA 570
Query: 492 ILDEVKQKHMYDAA 505
+D + ++ A
Sbjct: 571 AIDAYGKNGQWERA 584
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/397 (24%), Positives = 180/397 (45%), Gaps = 7/397 (1%)
Query: 111 KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLN 169
+ WK AL + S G + Y M + G+ + + +L +M S+G +
Sbjct: 263 EGQWKEALSVLT-EMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVI 321
Query: 170 TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL 229
+ ++ G GQWE +V DE+ G+ NT N + K G+ E A + E+
Sbjct: 322 SYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELLREV 381
Query: 230 KSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
+ + P+A +FN I K R EA ++EM P ISY++ I++ + +
Sbjct: 382 TALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQW 441
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
EL +M +G PNV++ + + G ++E + + +M G P+ +N
Sbjct: 442 EMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSA 501
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
I T G+ + ++A+ + +M E + PD+ T+N+ I S G ++A +L EM +
Sbjct: 502 IKTCGKGGQWEKALDLL-AKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPG-Q 559
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
P+V ++ + + K G+ + + +LL M K L+ ++ TY VI R + E
Sbjct: 560 GLTPDVISYTAAIDAYGKNGQWERAV-ELLRQMPTKG-LTPNVITYNSVIKACGRGGEWE 617
Query: 469 WAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
A L KE+ + P + L + ++ ++ A
Sbjct: 618 KALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEA 654
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 156/317 (49%), Gaps = 5/317 (1%)
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHT 239
GQWE A+ ++ T GL N + N+ + + G+ + + ++ + + PN T
Sbjct: 438 GGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVIT 497
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+N I K + ++A + +MK P I+Y++ I + ++ + + LL EM
Sbjct: 498 YNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMP 557
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
QG P+V++YT + K+G +E A+ + +M G P+ +N +I GR +
Sbjct: 558 GQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEWE 617
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
+A+ + + E+ E VAPD ++N I+ G E+A +L EM E P+V ++
Sbjct: 618 KALDLLK-ELKETAVAPDLMSYNLAISACGKRGRWEEALDLLREM-PAEGLTPDVISYTS 675
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
+++C G+ ++ L L +++ H +S T+Y+L I + + E A L +EM
Sbjct: 676 AIRACNAEGEWEKALGLL--NLMGAHGVSPTATSYSLAIEACGKGGRREEAVCLVREMAQ 733
Query: 480 HDITPRYQTCRLILDEV 496
++ R + LI++ +
Sbjct: 734 RGLSHRNISNSLIVEAL 750
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/405 (23%), Positives = 183/405 (45%), Gaps = 9/405 (2%)
Query: 114 WKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIA- 172
W+ ALGI G + Y + G+ Q ++ LL E+ + V+ N
Sbjct: 126 WREALGILDEMKE--GGVVCAHSYTTAITTCGRQGQWEKALELLREIPEQEGVSPNVFCY 183
Query: 173 -KVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS 231
+ QWE AV E+ + + + N + + G+ E + E+ S
Sbjct: 184 NSAIEACGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRGGQWERVIGLLREMPS 243
Query: 232 C-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSK 290
+ P+A T+N I G K + EA + EM G P ISY+ I++ R + +
Sbjct: 244 VGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKE 303
Query: 291 VYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIY 350
E+L +M++QG P+V++Y + G +E ++ + ++M G P++ FN I
Sbjct: 304 AVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIV 363
Query: 351 TLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHC 410
G+ + ++AV + + E+ G+ PD ++FN+ I + G ++A +L+EM +
Sbjct: 364 ACGKGGQWEKAVELLR-EVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEM-PAKRL 421
Query: 411 KPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWA 470
KP+ +++ +++C K G+ + L +L M K L+ ++ + + I + +
Sbjct: 422 KPDAISYNSAIEACGKGGQWEMAL-ELRRQMPTK-GLTPNVISSNIAIRACGERGRWQEG 479
Query: 471 YLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
L ++M +TP T + + ++ A + A MK+L
Sbjct: 480 LELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKEL 524
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 92/217 (42%), Gaps = 15/217 (6%)
Query: 95 AIQPSHYLVNKLIH--RFKDDWKSALGIFRWAGSCPGYEHSSEI--YEMMVDILGKVRQM 150
A+ P N I + WK A+ + R PG + ++ Y +D GK Q
Sbjct: 525 AMTPDSITYNSAIAACSKRGRWKEAVALLR---EMPGQGLTPDVISYTAAIDAYGKNGQW 581
Query: 151 DQMRALLEEM-SKG---HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETM 206
++ LL +M +KG +++T N++ K R G+WE A+ EL + + +
Sbjct: 582 ERAVELLRQMPTKGLTPNVITYNSVIKACGR---GGEWEKALDLLKELKETAVAPDLMSY 638
Query: 207 NLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKG 265
NL + K G+ E A + E+ + + P+ ++ I ++A + M
Sbjct: 639 NLAISACGKRGRWEEALDLLREMPAEGLTPDVISYTSAIRACNAEGEWEKALGLLNLMGA 698
Query: 266 HGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
HG P SYS I++ + + L+ EM +G
Sbjct: 699 HGVSPTATSYSLAIEACGKGGRREEAVCLVREMAQRG 735
>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 157/305 (51%), Gaps = 5/305 (1%)
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC- 232
++ R S G+ + + + F ++G G++++ T N+++D LCKEG +E+ARS+F ++K
Sbjct: 27 LLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAG 86
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
P+ T+N I G K+ +DE ++MK C P VI+Y+ +I +C+ K +
Sbjct: 87 FTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAF 146
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
E L EM+A G PNVVTY+T + K G +EAI+ M+ V P+ + LI
Sbjct: 147 EFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDAN 206
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
+A + EA+ + + E+ + G+ + T+ ++ G ++A V M P
Sbjct: 207 CKAGNLAEALKLVE-EILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLN-AGVAP 264
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
N +T+ L+ F K E +L +M K + D+ Y ++ GLC ++ E A L
Sbjct: 265 NQETYTALVHG-FIKAKEMEYAKDILKEMKEK-CIKPDLLLYGTILWGLCNESRLEEAKL 322
Query: 473 LFKEM 477
L E+
Sbjct: 323 LIGEI 327
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 103/441 (23%), Positives = 190/441 (43%), Gaps = 36/441 (8%)
Query: 71 ISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGY 130
+SKV G + F+ + + ++ + +++ L + D + A +F G+
Sbjct: 31 LSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCK--EGDLEMARSLFTQMKE-AGF 87
Query: 131 EHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGH----IVTLNTIAKVMRRFSGAGQWED 186
Y ++D GK+ +D+ + E+M ++T N + +F +
Sbjct: 88 TPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFE---RMPK 144
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIH 245
A E+ GL+ N T + +D CKEG ++ A F++++ + PN T+ I
Sbjct: 145 AFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLID 204
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
CK + EA ++E+ G V++Y+ ++ C + + E+ M G P
Sbjct: 205 ANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAP 264
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N TYT ++ K+ + E A I ++MK KPD + +++ L SR++EA +
Sbjct: 265 NQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLI 324
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH--CK------------ 411
E+ E+G+ + + T++ + G +A +LEEM L CK
Sbjct: 325 G-EIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLCKNNCFEVAKKLFD 383
Query: 412 --------PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCR 463
P+ + L+ K G E L+ L D + + + LD+ YT +I GL
Sbjct: 384 EMLDKGMMPDKIAYTALIDGNMKHGNLQEALN--LRDRMIEIGMELDLHAYTALIWGLSH 441
Query: 464 ANKCEWAYLLFKEMIGHDITP 484
+ + + A L EMIG + P
Sbjct: 442 SGQVQKARNLLDEMIGKGVLP 462
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 148/298 (49%), Gaps = 6/298 (2%)
Query: 219 VELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
+E A FL+++ + P + N +H K+ R D ++ ++M G V +Y+
Sbjct: 2 LEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNI 61
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+I C++ + L +M+ G P++VTY +++ K G +E I I E+MK
Sbjct: 62 MIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDAD 121
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKA 397
PD +N LI + R+ +A + + EM NG+ P+ T++T I F G ++A
Sbjct: 122 CDPDVITYNALINCFCKFERMPKA-FEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEA 180
Query: 398 FHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLV 457
+M ++ PN T+ L+ + K G E L +L+++++ + + L++ TYT +
Sbjct: 181 IKFFVDMRRV-ALTPNEFTYTSLIDANCKAGNLAEAL-KLVEEIL-QAGIKLNVVTYTAL 237
Query: 458 IHGLCRANKCEWAYLLFKEMIGHDITPRYQT-CRLILDEVKQKHMYDAAEKIEAVMKK 514
+ GLC + + A +F+ M+ + P +T L+ +K K M A + ++ + +K
Sbjct: 238 LDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEK 295
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 137/292 (46%), Gaps = 27/292 (9%)
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHT 239
AG +A++ +E+ G++ N T LLD LC+EG+++ A VF L + + PN T
Sbjct: 209 AGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQET 268
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+ +HG+ K ++ A+ ++EMK P ++ Y TI+ C + + L+ E++
Sbjct: 269 YTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIK 328
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIV----------------------- 336
G N V YTT+M KSG EA+ + E+M +
Sbjct: 329 ESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDK 388
Query: 337 GSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEK 396
G PD + LI + +QEA+ + M E G+ D + +I SH G +K
Sbjct: 389 GMMPDKIAYTALIDGNMKHGNLQEALNLRD-RMIEIGMELDLHAYTALIWGLSHSGQVQK 447
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
A ++L+EM + P+ + L+K + GK DE L +L ++M + ++
Sbjct: 448 ARNLLDEMIG-KGVLPDEVVYMCLIKKYYALGKVDEAL-ELQNEMAKRGMIT 497
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 80/193 (41%), Gaps = 4/193 (2%)
Query: 323 FEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFN 382
EEA KM+ P R N L++ L + R + ++ +M G+ T+N
Sbjct: 2 LEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFK-DMGAAGIKRSVFTYN 60
Query: 383 TMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMV 442
MI G E A + +M K P++ T++ L+ K G DEC+ + + +
Sbjct: 61 IMIDYLCKEGDLEMARSLFTQM-KEAGFTPDIVTYNSLIDGHGKLGLLDECIC--IFEQM 117
Query: 443 NKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMY 502
D+ TY +I+ C+ + A+ EM + + P T +D ++ M
Sbjct: 118 KDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGML 177
Query: 503 DAAEKIEAVMKKL 515
A K M+++
Sbjct: 178 QEAIKFFVDMRRV 190
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 75/177 (42%), Gaps = 16/177 (9%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAV 188
G ++ IY ++D K Q + LLEEM L+ + + + +E A
Sbjct: 331 GINTNAVIYTTLMDAYFKSGQATEALTLLEEM-------LDLVDGLCKN----NCFEVAK 379
Query: 189 RTFDELGTFGLEKNTETMNLLLDTLCKEGKVELA---RSVFLELKSCIPPNAHTFNIFIH 245
+ FDE+ G+ + L+D K G ++ A R +E+ + + H + I
Sbjct: 380 KLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIG--MELDLHAYTALIW 437
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
G +V +A+ + EM G G P + Y +I+ Y + EL +EM +G
Sbjct: 438 GLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRG 494
>gi|449443903|ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
gi|449475521|ref|XP_004154479.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
Length = 660
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 186/382 (48%), Gaps = 13/382 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGH------IVTLNTIA--KVMRRFSGAGQWEDAV 188
+ ++++ L K R++D + E+M KG V +TI ++ G+ E+A+
Sbjct: 190 FGILINHLCKFRRIDDALEVFEKM-KGEKEETKVFVAPDTIMYNTLIDGLCKVGRQEEAL 248
Query: 189 RTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGW 247
++ + T T N L++ C+ G++E+A +F E+++ I PN T N + G
Sbjct: 249 CLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVITLNTLVDGM 308
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
CK NR+ A + M+ G ++Y+ I ++C N +K E LDEM GC P+
Sbjct: 309 CKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDA 368
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
V Y T++ LA++G ++A + K+K G D +N LI + +++ A +
Sbjct: 369 VVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKNKLDRA-QEWLN 427
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKT 427
EM GV PD+ T+NT+I+ FS G+ + A +++M + E P V T+ L+ +
Sbjct: 428 EMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFTYGALIHAYCLN 487
Query: 428 GKTDECLSQLLDDMVN-KHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
DE + ++ +M N + + Y ++I LC+ + +A L +M + P
Sbjct: 488 NNIDEAI-KIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVNFALSLLDDMKFRGVMPNT 546
Query: 487 QTCRLILDEVKQKHMYDAAEKI 508
T I ++ K+ D A K+
Sbjct: 547 TTYNSIFKALRDKNWLDKAFKL 568
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 160/360 (44%), Gaps = 77/360 (21%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
+Y ++D L KV + ++ L+ +M T T ++ + +G+ E A + F+E+
Sbjct: 230 MYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEM 289
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRV 253
+E N T+N L+D +CK ++ A F ++ + N T+ +FI+ +C +N +
Sbjct: 290 ENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNM 349
Query: 254 DEAQWTIQEMKGHGCHP---------------------------------CV--ISYSTI 278
++A + EM GC P C+ + Y+ +
Sbjct: 350 NKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVL 409
Query: 279 IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF--------------- 323
I +C++ + E L+EM+ G P+ VTY T++SY +K G+F
Sbjct: 410 ISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEG 469
Query: 324 ---------------------EEAIRITEKMKIVGSK--PDSRFFNCLIYTLGRASRVQE 360
+EAI+I ++M V SK P++ +N LI +L + ++V
Sbjct: 470 LSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVNF 529
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
A+ + +M GV P+T+T+N++ +KAF +++ M + + C P+ T L
Sbjct: 530 ALSLLD-DMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVE-QACNPDYITMEIL 587
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 146/318 (45%), Gaps = 19/318 (5%)
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL---K 230
++RR G ++A+ F L + KNT N +++ L K G+V+ A +V E+ +
Sbjct: 12 LLRRLGRIGMVDEALAAFSTLDSHA--KNTNVRNEIINLLLKSGRVDNAMNVLDEMLLPE 69
Query: 231 SCIPPNAHTFNIFIHGWCKIN------RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCR 284
S PN T I + KI+ + DE + + H P I+ + +I CR
Sbjct: 70 SEFRPNDKTAGIVFNNLLKIDGLEGRVKEDEIAGLVSKFGKHNIFPDTIALTQLISKLCR 129
Query: 285 QYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRF 344
N + + +LD + + +++ L K+ +F + + KMK + +P
Sbjct: 130 SGNTNLAWNILDNLMMLNGLKDAAPCNALLTGLGKAREFGKMNLLMRKMKDMNIQPTVIT 189
Query: 345 FNCLIYTLGRASRVQEAVYVYQVEMPENG-----VAPDTSTFNTMITMFSHHGHHEKAFH 399
F LI L + R+ +A+ V++ E VAPDT +NT+I G E+A
Sbjct: 190 FGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNTLIDGLCKVGRQEEALC 249
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIH 459
++ +M + + C P TF+ L+ ++G+ E +L ++M N + ++ T ++
Sbjct: 250 LMGKM-RSDQCAPTTATFNCLINGYCRSGEI-EVAHKLFNEMENA-QIEPNVITLNTLVD 306
Query: 460 GLCRANKCEWAYLLFKEM 477
G+C+ N+ A F+ M
Sbjct: 307 GMCKHNRISTAVEFFRVM 324
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 102/228 (44%), Gaps = 15/228 (6%)
Query: 112 DDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI----VT 167
DD S + + AG C Y +++ K ++D+ + L EM + VT
Sbjct: 385 DDASSVVSKLKEAGFC----LDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVT 440
Query: 168 LNTIAKVMRRFSGAGQWEDAVRTFDELGTF-GLEKNTETMNLLLDTLCKEGKVELARSVF 226
NT+ + FS G ++ A + ++ GL T L+ C ++ A +F
Sbjct: 441 YNTL---ISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIF 497
Query: 227 LELK---SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYC 283
E+ S +PPN +NI I CK +V+ A + +MK G P +Y++I ++
Sbjct: 498 KEMNNVASKVPPNTVIYNILIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALR 557
Query: 284 RQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
+ K ++L+D M Q C P+ +T + +L+ G+ + + T+
Sbjct: 558 DKNWLDKAFKLMDRMVEQACNPDYITMEILTEWLSAVGEITKLKKFTQ 605
Score = 42.4 bits (98), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 11/173 (6%)
Query: 348 LIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKL 407
L+ LGR V EA+ + + A +T+ N +I + G + A +VL+EM
Sbjct: 12 LLRRLGRIGMVDEALAAFSTL---DSHAKNTNVRNEIINLLLKSGRVDNAMNVLDEMLLP 68
Query: 408 E-HCKPNVQT----FHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC 462
E +PN +T F+ LLK G+ E L KH++ D T +I LC
Sbjct: 69 ESEFRPNDKTAGIVFNNLLKIDGLEGRVKEDEIAGLVSKFGKHNIFPDTIALTQLISKLC 128
Query: 463 RANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
R+ A+ + ++ + C +L + + + K+ +M+K+
Sbjct: 129 RSGNTNLAWNILDNLMMLNGLKDAAPCNALLTGLGKAREFG---KMNLLMRKM 178
>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
Length = 609
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 158/304 (51%), Gaps = 5/304 (1%)
Query: 210 LDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGC 268
+ T CKE V A + E+++ P+ T+N+ I+G CK R+DEA + M +GC
Sbjct: 89 VQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGC 148
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
P VI+++ I++S C + +LL +M +GC P+VVT+ ++++L + G AI
Sbjct: 149 QPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAID 208
Query: 329 ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF 388
I EKM + G P+S +N L++ + ++ A+ + M G PD T+NT++T
Sbjct: 209 ILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDI-MVSRGCYPDIVTYNTLLTAL 267
Query: 389 SHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
G + A +L +++ + C P + T++ ++ K GKT+ + +LLD+M K L
Sbjct: 268 CKDGKVDVAVEILNQLSS-KGCSPVLITYNTVIDGLSKVGKTERAI-KLLDEMRRK-GLK 324
Query: 449 LDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
DI TY+ ++ GL R K + A F ++ G I P T I+ + + D A
Sbjct: 325 PDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDF 384
Query: 509 EAVM 512
A M
Sbjct: 385 LAYM 388
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 165/314 (52%), Gaps = 13/314 (4%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++++ + K ++D+ L M + +++T N I +R G+W DA +
Sbjct: 120 YNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNII---LRSMCSTGRWMDAEKLLS 176
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKI 250
++ G + T N+L++ LC++G + A + + + C P N+ ++N +HG+CK
Sbjct: 177 DMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTP-NSLSYNPLLHGFCKE 235
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
++D A + M GC+P +++Y+T++ + C+ E+L+++ ++GC P ++TY
Sbjct: 236 KKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITY 295
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
TV+ L+K G E AI++ ++M+ G KPD ++ L+ L R +V EA+ + ++
Sbjct: 296 NTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFH-DLE 354
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKT 430
G+ P+ T+N+++ ++A L M + CKP T+ L++ G
Sbjct: 355 GLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMIS-KRCKPTEATYTILIEGIAYEGLA 413
Query: 431 DECLSQLLDDMVNK 444
E L LL+++ ++
Sbjct: 414 KEAL-DLLNELCSR 426
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 158/328 (48%), Gaps = 8/328 (2%)
Query: 179 SGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNA 237
SG GQ A++ DE+ G + + T N+L++ +CKEG+++ A + S PN
Sbjct: 96 SGVGQ---AMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNV 152
Query: 238 HTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDE 297
T NI + C R +A+ + +M GC P V++++ +I CRQ + ++L++
Sbjct: 153 ITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEK 212
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
M GC PN ++Y ++ K + AI + M G PD +N L+ L + +
Sbjct: 213 MPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGK 272
Query: 358 VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTF 417
V AV + ++ G +P T+NT+I S G E+A +L+EM + + KP++ T+
Sbjct: 273 VDVAVEILN-QLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRR-KGLKPDIITY 330
Query: 418 HPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
L+ + GK DE + D + + + TY ++ GLC++ + + A M
Sbjct: 331 SSLVSGLSREGKVDEAIKFFHD--LEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYM 388
Query: 478 IGHDITPRYQTCRLILDEVKQKHMYDAA 505
I P T ++++ + + + A
Sbjct: 389 ISKRCKPTEATYTILIEGIAYEGLAKEA 416
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 121/247 (48%), Gaps = 6/247 (2%)
Query: 270 PC--VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
PC + +S +Q+ C++ + +LLDEM+ +G P+VVTY +++ + K G +EAI
Sbjct: 78 PCFSLSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAI 137
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITM 387
+ M G +P+ N ++ ++ R +A + +M G +P TFN +I
Sbjct: 138 KFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLS-DMLRKGCSPSVVTFNILINF 196
Query: 388 FSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHL 447
G +A +LE+M + C PN +++PLL K K D + + LD MV++
Sbjct: 197 LCRQGLLGRAIDILEKM-PMHGCTPNSLSYNPLLHGFCKEKKMDRAI-EYLDIMVSRGCY 254
Query: 448 SLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEK 507
DI TY ++ LC+ K + A + ++ +P T ++D + + + A K
Sbjct: 255 P-DIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIK 313
Query: 508 IEAVMKK 514
+ M++
Sbjct: 314 LLDEMRR 320
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 84/168 (50%), Gaps = 2/168 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ L K ++D +L ++S KG L T V+ S G+ E A++ DE+
Sbjct: 260 YNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMR 319
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVD 254
GL+ + T + L+ L +EGKV+ A F +L+ I PNA T+N + G CK + D
Sbjct: 320 RKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTD 379
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
A + M C P +Y+ +I+ + + +LL+E+ ++G
Sbjct: 380 RAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRG 427
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 142/286 (49%), Gaps = 10/286 (3%)
Query: 205 TMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQE 262
T L+D CK G +E A + +E + C+P N T++ +HG CK +D+A +
Sbjct: 191 TYTALIDGFCKSGNLEKAMKMLGVMEGRKCVP-NVVTYSSLLHGLCKAGDLDQALDLFRR 249
Query: 263 MKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGD 322
M GC P V++Y+T+I C + L+DEM A CP + V+Y ++ + G
Sbjct: 250 MTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGR 309
Query: 323 FEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFN 382
EEA ++ ++M PD + CL+ ASR++EA ++ + G+ PD T++
Sbjct: 310 IEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYS 369
Query: 383 TMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMV 442
++ +S +A ++EM + PN T+ L+ K G+ + + L + V
Sbjct: 370 IVVAGYSRAKRFVEAAEFIQEMIA-RNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKN--V 426
Query: 443 NKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+K D+ TYT+VI GLC ++ E A L +EM+ + P T
Sbjct: 427 DKP----DVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGT 468
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 185/382 (48%), Gaps = 18/382 (4%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ L K +DQ L M SKG + + T ++ A + + A DE+
Sbjct: 227 YSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMT 286
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRV 253
+T + N LLD C+ G++E A+ +F E+ KSC+P + T+ + G+C +R+
Sbjct: 287 ATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLP-DRITYTCLVRGFCNASRL 345
Query: 254 DEAQWTIQEMK-GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
+EA++ ++ MK G P V++YS ++ Y R F + E + EM A+ PN VTY++
Sbjct: 346 EEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSS 405
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN 372
++ L K+G A+ + + + KPD + +I L R +EA+ + + EM
Sbjct: 406 LIDGLCKAGRVNHAMEVLKNV----DKPDVVTYTIVIEGLCGTDRTEEALTLLE-EMVNK 460
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
V P TFN++I G ++A+ +L M +P + T+ LL+ +TG+ E
Sbjct: 461 RVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAA-HGLEPGMVTYTTLLEGFSRTGRM-E 518
Query: 433 CLSQLLDDMVNKHHLSLDIT------TYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
+L + M K S ++ +I GLC+A + + A + +E+ + P
Sbjct: 519 IAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAE 578
Query: 487 QTCRLILDEVKQKHMYDAAEKI 508
+ C I+D + + + A K+
Sbjct: 579 EDCLAIVDGLLRAGRTEEAGKL 600
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 139/288 (48%), Gaps = 42/288 (14%)
Query: 229 LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK-GHGCHPCVISYSTIIQSYCRQYN 287
++ + PN T+N+ ++G CK +A ++EM+ G P +++YST+I +C+Q
Sbjct: 1 MREFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGE 60
Query: 288 FSKVYELLDEMQAQ-GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFN 346
+ E+L EM + G P+VVTYT+V+ L + G + A + +MK+ G +PD F+
Sbjct: 61 MDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFS 120
Query: 347 CLIYTLGRASRVQEAVYVY------------------------------------QVEMP 370
LI A +V EA+ +Y ++EM
Sbjct: 121 ALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMR 180
Query: 371 ENGV-APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
E+G PD T+ +I F G+ EKA +L M C PNV T+ LL K G
Sbjct: 181 EDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEG-RKCVPNVVTYSSLLHGLCKAGD 239
Query: 430 TDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
D+ L L M +K + ++ TYT +IHGLC A+K + A LL EM
Sbjct: 240 LDQAL-DLFRRMTSKGCVP-NVVTYTTLIHGLCAAHKVDAARLLMDEM 285
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 133/280 (47%), Gaps = 13/280 (4%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM--SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
Y +V ++++ R LLE M + G + T + V+ +S A ++ +A E+
Sbjct: 332 YTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEM 391
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVD 254
+ N T + L+D LCK G+V A V LK+ P+ T+ I I G C +R +
Sbjct: 392 IARNVAPNAVTYSSLIDGLCKAGRVNHAMEV---LKNVDKPDVVTYTIVIEGLCGTDRTE 448
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA ++EM P V +++++I + CR + + ++LL M A G P +VTYTT++
Sbjct: 449 EALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLL 508
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDS-------RFFNCLIYTLGRASRVQEAVYVYQV 367
+++G E A + E M+ K S + F+ LI L +A + +A+ V +
Sbjct: 509 EGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVE- 567
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKL 407
E+ P ++ G E+A ++ ++K+
Sbjct: 568 ELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKV 607
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/209 (19%), Positives = 94/209 (44%), Gaps = 11/209 (5%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGT 196
Y ++D L K +++ +L+ + K +VT V+ G + E+A+ +E+
Sbjct: 403 YSSLIDGLCKAGRVNHAMEVLKNVDKPDVVTYTI---VIEGLCGTDRTEEALTLLEEMVN 459
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDE 255
+E + T N ++ LC+ G ++ A + + + + + P T+ + G+ + R++
Sbjct: 460 KRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEI 519
Query: 256 AQWTIQEMKGHGCHPCVIS-------YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
A + M+ + +S +I+ C+ K +++E++++ C P
Sbjct: 520 AYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEE 579
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
++ L ++G EEA ++ + VG
Sbjct: 580 DCLAIVDGLLRAGRTEEAGKLINSISKVG 608
>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 654
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 176/357 (49%), Gaps = 20/357 (5%)
Query: 152 QMRALLEEMSKGHIVTLNTIA--KVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLL 209
+ + LL+EM + ++ + + ++ F G++ +A +DE+ G+ +T T + +
Sbjct: 273 EAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSM 332
Query: 210 LDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG 267
+D CK+ +++ A +F + K C P+ TFN I G+C+ RVD+ + EM G
Sbjct: 333 IDGFCKQNRLDAAEHMFYLMATKGC-SPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAG 391
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
I+Y+T+I +C+ + + +LL EM + G PNVVT T++ L +G ++A+
Sbjct: 392 LVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDAL 451
Query: 328 RITEKMK-----------IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
+ + M+ G +PD + +N LI L + EA +Y+ EMP G+ P
Sbjct: 452 EMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYE-EMPHRGIVP 510
Query: 377 DTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQ 436
DT T+N++I ++A + + M + PNV TF L+ K G+ D+ L
Sbjct: 511 DTITYNSVIHGLCKQSRLDEATQMFDSMGS-KSFSPNVVTFTTLINGYCKAGRVDDGLEL 569
Query: 437 LLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
+ + + + + TY +IHG + A +F+EM+ + P T R +L
Sbjct: 570 FCE--MGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNML 624
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 174/368 (47%), Gaps = 22/368 (5%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRR------FSGA 181
G + + Y +VD + K+ LL +M + HI I + RR F +
Sbjct: 209 GLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSS 268
Query: 182 GQWEDAVRTFDE-LGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHT 239
G+W +A + E L + + T N L++ KEGK A ++ E L I P+ T
Sbjct: 269 GRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTIT 328
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
++ I G+CK NR+D A+ M GC P +I+++T+I YCR +LL EM
Sbjct: 329 YSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMT 388
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
G N +TYTT++ + GD A + ++M G P+ N L+ L +++
Sbjct: 389 EAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLK 448
Query: 360 EAVYVYQVEM----------PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH 409
+A+ +++ P NGV PD T+N +I+ + G +A + EEM
Sbjct: 449 DALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH-RG 507
Query: 410 CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEW 469
P+ T++ ++ K + DE +Q+ D M +K S ++ T+T +I+G C+A + +
Sbjct: 508 IVPDTITYNSVIHGLCKQSRLDEA-TQMFDSMGSK-SFSPNVVTFTTLINGYCKAGRVDD 565
Query: 470 AYLLFKEM 477
LF EM
Sbjct: 566 GLELFCEM 573
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 162/351 (46%), Gaps = 21/351 (5%)
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCI 233
+M+ F + A+ TF ++ G T + LL LC E ++ A +F ++
Sbjct: 119 LMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQM---C 175
Query: 234 PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
PN TF ++G C+ RV EA + M G P I+Y TI+ C+ +
Sbjct: 176 KPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALN 235
Query: 294 LLDEMQ-AQGCPPNVVTY-----TTVMSYLAKSGDFEEAIRITEKM----KIVGSKPDSR 343
LL +M+ PNVV + T +++ SG + EA ++ ++M KI PD
Sbjct: 236 LLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKI---SPDVV 292
Query: 344 FFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEE 403
+N LI + + EA +Y EM G+ P T T+++MI F + A H+
Sbjct: 293 TYNALINAFVKEGKFFEAEELYD-EMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYL 351
Query: 404 MNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCR 463
M + C P++ TF+ L+ + + D+ + +LL +M + L + TYT +IHG C+
Sbjct: 352 MAT-KGCSPDIITFNTLIAGYCRAKRVDDGI-KLLHEM-TEAGLVANTITYTTLIHGFCQ 408
Query: 464 ANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEAVMK 513
A L +EM+ + P TC +LD + + DA E +A+ K
Sbjct: 409 VGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQK 459
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 173/377 (45%), Gaps = 23/377 (6%)
Query: 156 LLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK 215
L +M K ++VT T+ + R G+ +AV D + GL+ N T ++D +CK
Sbjct: 170 LFHQMCKPNVVTFTTLMNGLCR---EGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCK 226
Query: 216 EGKVELARSVF--LELKSCIPPNAHTFNI-----FIHGWCKINRVDEAQWTIQEM-KGHG 267
G A ++ +E S I PN + + I+G+C R EAQ +QEM +
Sbjct: 227 MGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKK 286
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
P V++Y+ +I ++ ++ F + EL DEM +G P+ +TY++++ K + A
Sbjct: 287 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAE 346
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITM 387
+ M G PD FN LI RA RV + + + EM E G+ +T T+ T+I
Sbjct: 347 HMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLH-EMTEAGLVANTITYTTLIHG 405
Query: 388 FSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL---------L 438
F G A +L+EM C PNV T + LL GK + L +
Sbjct: 406 FCQVGDLNAAQDLLQEMVSSGVC-PNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDI 464
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-K 497
D + + D+ TY ++I GL K A L++EM I P T ++ + K
Sbjct: 465 DASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCK 524
Query: 498 QKHMYDAAEKIEAVMKK 514
Q + +A + +++ K
Sbjct: 525 QSRLDEATQMFDSMGSK 541
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 176/384 (45%), Gaps = 22/384 (5%)
Query: 41 IESYCSDGARLDHHQVL--CVDSPRL-PDIDVIISKVHVGSSEDEVFQS--LKQDHVCNA 95
I +CS G + Q+L ++ ++ PD+ + ++ E + F++ L + +
Sbjct: 262 INGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRG 321
Query: 96 IQPSHYLVNKLIHRF-KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMR 154
I PS + +I F K + A + + G + ++ + +++D
Sbjct: 322 IIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGI 381
Query: 155 ALLEEMSKGHIVTLNTIA--KVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDT 212
LL EM++ +V NTI ++ F G A E+ + G+ N T N LLD
Sbjct: 382 KLLHEMTEAGLVA-NTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDG 440
Query: 213 LCKEGKVELARSVFLELK------------SCIPPNAHTFNIFIHGWCKINRVDEAQWTI 260
LC GK++ A +F ++ + + P+ T+NI I G + EA+
Sbjct: 441 LCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELY 500
Query: 261 QEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKS 320
+EM G P I+Y+++I C+Q + ++ D M ++ PNVVT+TT+++ K+
Sbjct: 501 EEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKA 560
Query: 321 GDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTST 380
G ++ + + +M G ++ + LI+ + + A+ ++Q EM +GV PDT T
Sbjct: 561 GRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQ-EMMASGVYPDTIT 619
Query: 381 FNTMITMFSHHGHHEKAFHVLEEM 404
M+T ++A +LE++
Sbjct: 620 IRNMLTGLWSKEELKRAVAMLEDL 643
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 146/311 (46%), Gaps = 49/311 (15%)
Query: 209 LLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
L+ + + G++++ S+ +E++ +P NA++F I + +C +++ A T ++
Sbjct: 84 LMGVVVRMGRLDVVISLHRKMEMRR-VPCNAYSFTILMKCFCSCSKLPFALSTFGKITKL 142
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
G HP V+++ST++ C + S+ +L +M C PNVVT+TT+M+ L
Sbjct: 143 GFHPTVVTFSTLLHGLCVEDRISEALDLFHQM----CKPNVVTFTTLMNGLC-------- 190
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
R RV EAV + M E+G+ P+ T+ T++
Sbjct: 191 ---------------------------REGRVVEAVALLD-RMLEDGLQPNQITYGTIVD 222
Query: 387 MFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF-----KTGKTDECLSQLLDDM 441
G A ++L +M ++ H KPNV + ++C +G+ E QLL +M
Sbjct: 223 GMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEA-QQLLQEM 281
Query: 442 VNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHM 501
+ + +S D+ TY +I+ + K A L+ EM+ I P T ++D +++
Sbjct: 282 LERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNR 341
Query: 502 YDAAEKIEAVM 512
DAAE + +M
Sbjct: 342 LDAAEHMFYLM 352
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 79/155 (50%), Gaps = 1/155 (0%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTF 240
G++ +A ++E+ G+ +T T N ++ LCK+ +++ A +F + S PN TF
Sbjct: 491 GKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTF 550
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
I+G+CK RVD+ EM G I+Y T+I + + N + ++ EM A
Sbjct: 551 TTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMA 610
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKI 335
G P+ +T +++ L + + A+ + E +++
Sbjct: 611 SGVYPDTITIRNMLTGLWSKEELKRAVAMLEDLQM 645
>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 173/350 (49%), Gaps = 40/350 (11%)
Query: 135 EIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDE 193
E+Y ++D L K + + + L EM+ KG + T + ++ F G+ ++A+ +E
Sbjct: 200 EMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNE 259
Query: 194 LGTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIP------------------ 234
+ + N T N+L+D LCKEGKV+ A+SV + LK+C+
Sbjct: 260 MVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYE 319
Query: 235 -----------------PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
P+ HT+ I I+G+CK VDEA +EM P +++YS+
Sbjct: 320 VKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSS 379
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+I C+ V++L+DEM+ +G P +V+TY++++ L K+G + AI + KMK
Sbjct: 380 LIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQE 439
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKA 397
+P+ F L+ L + R+++A V+Q ++ G + T+N MI G E+A
Sbjct: 440 IRPNIFTFTILLDGLCKGGRLKDAQEVFQ-DLLTKGYHLNVYTYNVMINGHCKQGLLEEA 498
Query: 398 FHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHL 447
+L +M C PN TF ++ + FK + D+ +LL M+ + L
Sbjct: 499 LTMLSKMED-NGCIPNAFTFETIIIALFKKDENDKA-EKLLRQMIARGLL 546
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 170/354 (48%), Gaps = 15/354 (4%)
Query: 166 VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK----EGKVEL 221
VTLNT+ K + GQ + A+ D+L G + N + L++ +CK G ++L
Sbjct: 130 VTLNTLIKGL---CLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKL 186
Query: 222 ARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQS 281
R + L PN ++ I CK V EA EM G V++YST+I
Sbjct: 187 LRKIDGRLTK---PNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYG 243
Query: 282 YCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPD 341
+C + + LL+EM + PNV TY ++ L K G +EA + M KPD
Sbjct: 244 FCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPD 303
Query: 342 SRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVL 401
++ L+ V++A +V+ M GV PD T+ +I F + ++A ++
Sbjct: 304 VITYSTLMDGYFLVYEVKKAQHVFNA-MSLMGVTPDVHTYTILINGFCKNKMVDEALNLF 362
Query: 402 EEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGL 461
+EM++ ++ P + T+ L+ K+G+ + L+D+M ++ + D+ TY+ +I GL
Sbjct: 363 KEMHQ-KNMVPGIVTYSSLIDGLCKSGRI-PYVWDLIDEMRDRGQPA-DVITYSSLIDGL 419
Query: 462 CRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEAVMKK 514
C+ + A LF +M +I P T ++LD + K + DA E + ++ K
Sbjct: 420 CKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTK 473
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 171/359 (47%), Gaps = 12/359 (3%)
Query: 153 MRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDT 212
+R + ++K ++ +TI + ++ +A F E+ G+ + T + L+
Sbjct: 187 LRKIDGRLTKPNVEMYSTIIDALCKYQ---LVSEAYGLFSEMTVKGISADVVTYSTLIYG 243
Query: 213 LCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPC 271
C EGK++ A + E+ I PN +T+NI + CK +V EA+ + M P
Sbjct: 244 FCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPD 303
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
VI+YST++ Y Y K + + M G P+V TYT +++ K+ +EA+ + +
Sbjct: 304 VITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFK 363
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV--EMPENGVAPDTSTFNTMITMFS 389
+M P ++ LI L ++ R+ YV+ + EM + G D T++++I
Sbjct: 364 EMHQKNMVPGIVTYSSLIDGLCKSGRIP---YVWDLIDEMRDRGQPADVITYSSLIDGLC 420
Query: 390 HHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSL 449
+GH ++A + +M K + +PN+ TF LL K G+ + D + +HL
Sbjct: 421 KNGHLDRAIALFNKM-KDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHL-- 477
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
++ TY ++I+G C+ E A + +M + P T I+ + +K D AEK+
Sbjct: 478 NVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKL 536
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 155/324 (47%), Gaps = 7/324 (2%)
Query: 173 KVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKS 231
K++ F+ + AV L G++ + T+N+L++ C G++ SV + LK
Sbjct: 64 KILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKR 123
Query: 232 CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKV 291
PP+ T N I G C +V +A ++ G +SY+T+I C+ +
Sbjct: 124 GYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGA 183
Query: 292 YELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYT 351
+LL ++ + PNV Y+T++ L K EA + +M + G D ++ LIY
Sbjct: 184 IKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYG 243
Query: 352 LGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHC- 410
+++EA+ + EM + P+ T+N ++ G ++A VL M L+ C
Sbjct: 244 FCIEGKLKEAIGLLN-EMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVM--LKACV 300
Query: 411 KPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWA 470
KP+V T+ L+ F + + +Q + + ++ ++ D+ TYT++I+G C+ + A
Sbjct: 301 KPDVITYSTLMDGYFLVYEVKK--AQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEA 358
Query: 471 YLLFKEMIGHDITPRYQTCRLILD 494
LFKEM ++ P T ++D
Sbjct: 359 LNLFKEMHQKNMVPGIVTYSSLID 382
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 119/265 (44%), Gaps = 4/265 (1%)
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
I VD+A M P +I ++ I+ S+ + ++S L ++ +G P+++T
Sbjct: 37 IQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLIT 96
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM 369
+++ G + K+ G PD+ N LI L +V++A++ + ++
Sbjct: 97 LNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHD-KL 155
Query: 370 PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
G + ++ T+I G A +L +++ KPNV+ + ++ + K
Sbjct: 156 LAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDG-RLTKPNVEMYSTIIDALCKYQL 214
Query: 430 TDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTC 489
E L +M K +S D+ TY+ +I+G C K + A L EM+ I P T
Sbjct: 215 VSEAYG-LFSEMTVKG-ISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTY 272
Query: 490 RLILDEVKQKHMYDAAEKIEAVMKK 514
+++D + ++ A+ + AVM K
Sbjct: 273 NILVDALCKEGKVKEAKSVLAVMLK 297
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 157/305 (51%), Gaps = 5/305 (1%)
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC- 232
++ R S G+ + + + F ++G G++++ T N+++D LCKEG +E+ARS+F ++K
Sbjct: 226 LLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAG 285
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
P+ T+N I G K+ +DE ++MK C P VI+Y+ +I +C+ K +
Sbjct: 286 FTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAF 345
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
E L EM+A G PNVVTY+T + K G +EAI+ M+ V P+ + LI
Sbjct: 346 EFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDAN 405
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
+A + EA+ + + E+ + G+ + T+ ++ G ++A V M P
Sbjct: 406 CKAGNLAEALKLVE-EILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLN-AGVAP 463
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
N +T+ L+ F K E +L +M K + D+ Y ++ GLC ++ E A L
Sbjct: 464 NQETYTALVHG-FIKAKEMEYAKDILKEMKEK-CIKPDLLLYGTILWGLCNESRLEEAKL 521
Query: 473 LFKEM 477
L E+
Sbjct: 522 LIGEI 526
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 187/404 (46%), Gaps = 22/404 (5%)
Query: 113 DWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIA 172
D + AL F WA G++H+SE Y ++V IL R A+L+E+ + L +
Sbjct: 111 DARLALRFFEWAKGRIGFQHTSEAYCILVHILFCARFYSDANAVLKEL-----ICLRRVL 165
Query: 173 KVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC 232
F W G F + L L + G +E A FL+++
Sbjct: 166 PSWDVFDLL--WATRNVCVPGFGVF---------DALFSALIELGMLEEASECFLKMRKF 214
Query: 233 -IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKV 291
+ P + N +H K+ R D ++ ++M G V +Y+ +I C++ +
Sbjct: 215 RVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMA 274
Query: 292 YELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYT 351
L +M+ G P++VTY +++ K G +E I I E+MK PD +N LI
Sbjct: 275 RSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINC 334
Query: 352 LGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCK 411
+ R+ +A + + EM NG+ P+ T++T I F G ++A +M ++
Sbjct: 335 FCKFERMPKA-FEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVA-LT 392
Query: 412 PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAY 471
PN T+ L+ + K G E L +L+++++ + + L++ TYT ++ GLC + + A
Sbjct: 393 PNEFTYTSLIDANCKAGNLAEAL-KLVEEIL-QAGIKLNVVTYTALLDGLCEEGRMKEAE 450
Query: 472 LLFKEMIGHDITPRYQT-CRLILDEVKQKHMYDAAEKIEAVMKK 514
+F+ M+ + P +T L+ +K K M A + ++ + +K
Sbjct: 451 EVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEK 494
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 150/305 (49%), Gaps = 5/305 (1%)
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHT 239
AG +A++ +E+ G++ N T LLD LC+EG+++ A VF L + + PN T
Sbjct: 408 AGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQET 467
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+ +HG+ K ++ A+ ++EMK P ++ Y TI+ C + + L+ E++
Sbjct: 468 YTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIK 527
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
G N V YTT+M KSG EA+ + E+M +G + LI L ++ VQ
Sbjct: 528 ESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQ 587
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
EA++ + M E G+ P+ + + ++ + E A + +EM + P+ +
Sbjct: 588 EAMHHFG-RMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLD-KGMMPDKIAYTA 645
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
L+ K G E L+ L D + + + LD+ YT +I GL + + + A L EMIG
Sbjct: 646 LIDGNMKHGNLQEALN--LRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIG 703
Query: 480 HDITP 484
+ P
Sbjct: 704 KGVLP 708
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 109/246 (44%), Gaps = 13/246 (5%)
Query: 149 QMDQMRALLEEMSKGHIVTLNTI-AKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN 207
++++ + L+ E+ + I T I +M + +GQ +A+ +E+ GL T
Sbjct: 515 RLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYC 574
Query: 208 LLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
L+D LCK G V+ A F + + PN + + G CK N + A+ EM
Sbjct: 575 ALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDK 634
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
G P I+Y+ +I + N + L D M G ++ YT ++ L+ SG ++A
Sbjct: 635 GMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKA 694
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
+ ++M G PD + CLI +V EA+ + Q EM + G MIT
Sbjct: 695 RNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALEL-QNEMAKRG----------MIT 743
Query: 387 MFSHHG 392
S H
Sbjct: 744 GLSDHA 749
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 88/213 (41%), Gaps = 4/213 (1%)
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
C P + + S L + G EEA KM+ P R N L++ L + R +
Sbjct: 181 CVPGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSR 240
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLK 422
++ +M G+ T+N MI G E A + +M K P++ T++ L+
Sbjct: 241 KFFK-DMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQM-KEAGFTPDIVTYNSLID 298
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
K G DEC+ + + + D+ TY +I+ C+ + A+ EM + +
Sbjct: 299 GHGKLGLLDECIC--IFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGL 356
Query: 483 TPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
P T +D ++ M A K M+++
Sbjct: 357 KPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRV 389
>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
Length = 769
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 116/438 (26%), Positives = 195/438 (44%), Gaps = 46/438 (10%)
Query: 93 CNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSC---PGYEHSSEIYEMMV-DILGK 146
CN P+ L N L+H + + D+ A + +C PGY +Y + + I G+
Sbjct: 342 CN---PNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYV----VYNIFIGSICGQ 394
Query: 147 VRQMDQMRALLEEMSKGHIVTLN------TIAKVMRRFSGAGQWEDAVRTFDELGTFGLE 200
+ L E G ++ N +A R G G+++ A + E+ G
Sbjct: 395 EKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFV 454
Query: 201 KNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWT 259
+T T + ++ LC KVE A +F E+K + P+ +T+ I I +CK +++AQW
Sbjct: 455 PDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWL 514
Query: 260 IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK 319
+EM+ GC P V++Y+ +I +Y + + ++ M GC PN VTY ++ L K
Sbjct: 515 FEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCK 574
Query: 320 SGDFEEAIRITEKMKIVGSKPDSRF----------------FNCLIYTLGRASRVQEAVY 363
+G+ +A + K+ DS F + L+ L +A +V A
Sbjct: 575 AGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHE 634
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
+ M +G P+ ++ +I F G + A V +M K + P+V T+ L+
Sbjct: 635 LLDA-MLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYL-PSVHTYTSLIDR 692
Query: 424 CFKTGKTD---ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH 480
FK G+ D + LSQ+L D ++ TYT +I GLCR + E A L M
Sbjct: 693 MFKDGRLDLAMKVLSQMLKDSCTP-----NVVTYTAMIDGLCRIGESEKALKLLSLMEEK 747
Query: 481 DITPRYQTCRLILDEVKQ 498
+P T ++D + Q
Sbjct: 748 GCSPNVVTYTALIDGLGQ 765
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 162/400 (40%), Gaps = 25/400 (6%)
Query: 120 IFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVM-RRF 178
F WA GY H+ Y+ + D LG + LL E+ + L + V+ RR
Sbjct: 125 FFLWAERQVGYSHTGACYDALADALGFDGRARDAERLLREIGEEDREVLGRLLNVLVRRC 184
Query: 179 SGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNA 237
G W +A+ L FG + T N L+ L G+V+L V E+ +S +
Sbjct: 185 CRGGMWNEALEELGRLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDR 244
Query: 238 HTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDE 297
T F H CK R +A I+ + + +I F + L
Sbjct: 245 FTVGCFAHALCKEGRWADALDMIER---EDFKLDTVLCTHMISGLMEASYFDEAMSFLHR 301
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
M+ C PNVVTY T++S K RI M G P+ FN L+++
Sbjct: 302 MRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSY---CN 358
Query: 358 VQEAVYVYQV--EMPENGVAPDTSTFNTMITMFSHHGH---------HEKAFHVLEEMNK 406
++ Y Y++ M G P +N I EK + + N
Sbjct: 359 EKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANC 418
Query: 407 LEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANK 466
+ + K NV F L GK D+ QL+ +M+ K + D +TY+ VI LC A K
Sbjct: 419 VLN-KVNVANFARCLCG---VGKFDKAF-QLIKEMMRKGFVP-DTSTYSKVITFLCHATK 472
Query: 467 CEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAE 506
E A+LLF+EM +TP T +++D + + + A+
Sbjct: 473 VEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQ 512
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 106/478 (22%), Positives = 188/478 (39%), Gaps = 97/478 (20%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
GY S Y +V +L Q+D + +EMS+ G + T+ G+W DA
Sbjct: 204 GYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADA 263
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIH 245
+ D + + +T ++ L + + A S + SCIP N T+ +
Sbjct: 264 L---DMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIP-NVVTYRTLLS 319
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G+ K ++ + I M GC+P +++++ SYC + +++ Y+LL+ M GCPP
Sbjct: 320 GFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPP 379
Query: 306 NVVTYTTVMSY-----------------------------------------LAKSGDFE 324
V Y + L G F+
Sbjct: 380 GYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFD 439
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTM 384
+A ++ ++M G PD+ ++ +I L A++V++A ++Q EM GV PD T+ +
Sbjct: 440 KAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQ-EMKMVGVTPDVYTYTIL 498
Query: 385 ITMFSHHGHHEKAFHVLEEM----------------------------NKLEH------C 410
I F G E+A + EEM N + H C
Sbjct: 499 IDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGC 558
Query: 411 KPNVQTFHPLLKSCFKTGK--------------TDECLSQLLDDMVNKHHLSLDITTYTL 456
+PN T+ L+ K G +D S ++H L+ ++ TY
Sbjct: 559 RPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGA 618
Query: 457 VIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
++ GLC+A+K + A+ L M+ P + ++D + D+A+++ M K
Sbjct: 619 LVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 676
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 108/272 (39%), Gaps = 53/272 (19%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +++D K ++Q + L EEM S G T+ T ++ + A Q A F +
Sbjct: 495 YTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMV 554
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-----------------KSCIPPNAH 238
G N T L+D LCK G + A V+ +L + + PN
Sbjct: 555 DAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVV 614
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE----- 293
T+ + G CK ++VD A + M GC P I Y +I +C+ E
Sbjct: 615 TYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQM 674
Query: 294 --------------LLDEMQAQG----------------CPPNVVTYTTVMSYLAKSGDF 323
L+D M G C PNVVTYT ++ L + G+
Sbjct: 675 TKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGES 734
Query: 324 EEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
E+A+++ M+ G P+ + LI LG++
Sbjct: 735 EKALKLLSLMEEKGCSPNVVTYTALIDGLGQS 766
>gi|413952128|gb|AFW84777.1| hypothetical protein ZEAMMB73_772209 [Zea mays]
Length = 519
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 180/379 (47%), Gaps = 8/379 (2%)
Query: 128 PGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDA 187
PGY M+DIL K R+ D RALL+EM + + + ++RR A A
Sbjct: 130 PGYAPGRRACHSMLDILAKHRRFDAARALLDEMRRASTASPAAVLLLVRRHCAARDVAGA 189
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGW 247
V F L +FG + LL LC+ V+ A ++ + + P +FNI ++GW
Sbjct: 190 VAAFRALPSFGFHTGAAEFHGLLSALCRYKNVQDAENLLISWQKEFPFETKSFNIVLNGW 249
Query: 248 CKIN-RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C I V EA+ M+ G V+SY ++I + + + V +L + M G P+
Sbjct: 250 CNIVCSVREAKRFWSSMERKGIARDVLSYGSMISCFSKAGSLDSVMKLFNRMNEAGVAPD 309
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
Y ++ LAK +EA + M+ PD+ FN LI L +A + QEA+ ++
Sbjct: 310 RKVYNAIVFALAKGRCVKEAKMLVRSMEEKQVAPDTATFNSLIGPLCKARQFQEAMEMFD 369
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
M + ++P TF+ ++ + + + F +L++M +L C+P + T+ L++ F
Sbjct: 370 A-MLQRKLSPSVRTFHALLNVAR---NSTEVFDLLDKMKQL-RCEPEMDTYIMLIRK-FC 423
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
+ E + +L M + LS D + Y ++IHGL + E A ++EM P
Sbjct: 424 RWREHESVEKLWSAM-PANGLSPDRSAYIVLIHGLFLNGRLEEAARYYEEMKSKGFLPEK 482
Query: 487 QTCRLILDEVKQKHMYDAA 505
+T +++ ++ + + A+
Sbjct: 483 KTEEMVMAWLEGRELAKAS 501
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 194/373 (52%), Gaps = 10/373 (2%)
Query: 139 MMVDIL-GKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGT 196
++ D+L GK+++ + +E + K ++V+ NTI + +S G E A R D +
Sbjct: 180 IVFDLLEGKLKKAREFIGFMEGLGFKPNVVSYNTI---IHGYSSRGNIEGARRILDAMRV 236
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDE 255
G+E ++ T L+ +CKEG++E A +F ++ + + PNA T+N I G+C ++
Sbjct: 237 KGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLER 296
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
A EM G P V +Y+ ++ + + + +++ EM+ +G P+ +TY +++
Sbjct: 297 AFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILIN 356
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
++ G+ + A + +M G +P + LIY L R +R++EA +++ ++ + GV+
Sbjct: 357 GYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFE-KILDQGVS 415
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS 435
PD FN MI +G+ E+AF +L+EM++ + P+ TF+ L++ + GK +E
Sbjct: 416 PDVIMFNAMIDGHCANGNVERAFMLLKEMDR-KSVPPDEVTFNTLMQGRCREGKVEEA-R 473
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE 495
LLD+M + D +Y +I G R + A+ + EM+ P T ++
Sbjct: 474 MLLDEM-KXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKC 532
Query: 496 VKQKHMYDAAEKI 508
+ + D AE++
Sbjct: 533 LCKNQEGDLAEEL 545
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 152/330 (46%), Gaps = 32/330 (9%)
Query: 191 FDELGTFGLEKNTETMNLLLDTLCKEGKVELARSV--FLELKSCIPPNAHTFNIFIHGWC 248
FDEL T ++ + +++ D L EGK++ AR F+E PN ++N IHG+
Sbjct: 164 FDEL-TLSRDRLSVKSSIVFDLL--EGKLKKAREFIGFME-GLGFKPNVVSYNTIIHGYS 219
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
++ A+ + M+ G P +Y ++I C++ + L D+M G PN V
Sbjct: 220 SRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAV 279
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
TY T++ GD E A ++M G P +N L++ L R+ EA + + E
Sbjct: 280 TYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIK-E 338
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M + G+ PD T+N +I +S G+ ++AF + EM + +P T+ L+ +
Sbjct: 339 MRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLS-KGIEPTHVTYTSLIYVLSRRN 397
Query: 429 K---TDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP- 484
+ D+ ++LD V S D+ + +I G C E A++L KEM + P
Sbjct: 398 RMKEADDLFEKILDQGV-----SPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPD 452
Query: 485 ---------------RYQTCRLILDEVKQK 499
+ + R++LDE+K +
Sbjct: 453 EVTFNTLMQGRCREGKVEEARMLLDEMKXR 482
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 160/369 (43%), Gaps = 44/369 (11%)
Query: 95 AIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQ 152
+P+ N +IH + + + + A I A G E S Y ++ + K ++++
Sbjct: 203 GFKPNVVSYNTIIHGYSSRGNIEGARRILD-AMRVKGIEPDSYTYGSLISGMCKEGRLEE 261
Query: 153 MRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLD 211
L ++M + G + T ++ + G E A DE+ G+ + T NLL+
Sbjct: 262 ASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVH 321
Query: 212 TLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKI-------------------- 250
L EG++ A + E+ K I P+A T+NI I+G+ +
Sbjct: 322 ALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEP 381
Query: 251 ---------------NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
NR+ EA +++ G P VI ++ +I +C N + + LL
Sbjct: 382 THVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLL 441
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
EM + PP+ VT+ T+M + G EEA + ++MK G KPD +N LI GR
Sbjct: 442 KEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRR 501
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM-NKLEHCKPNV 414
+++A V EM G P T+N +I + + A +L+EM NK P+
Sbjct: 502 GDIKDAFXVRD-EMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNK--GISPDD 558
Query: 415 QTFHPLLKS 423
T+ L++
Sbjct: 559 STYLSLIEG 567
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 102/204 (50%), Gaps = 1/204 (0%)
Query: 158 EEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEG 217
E +SKG T T ++ S + ++A F+++ G+ + N ++D C G
Sbjct: 373 EMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANG 432
Query: 218 KVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYS 276
VE A + E+ + +PP+ TFN + G C+ +V+EA+ + EMK G P ISY+
Sbjct: 433 NVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYN 492
Query: 277 TIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIV 336
T+I Y R+ + + + DEM + G P ++TY ++ L K+ + + A + ++M
Sbjct: 493 TLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNK 552
Query: 337 GSKPDSRFFNCLIYTLGRASRVQE 360
G PD + LI +G + E
Sbjct: 553 GISPDDSTYLSLIEGMGNVDTLVE 576
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 4/143 (2%)
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
G P+ ++NT+I +S G+ E A +L+ M +++ +P+ T+ L+ K G+ +E
Sbjct: 203 GFKPNVVSYNTIIHGYSSRGNIEGARRILDAM-RVKGIEPDSYTYGSLISGMCKEGRLEE 261
Query: 433 CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLI 492
S L D MV + L + TY +I G C E A+ EM+ I P T L+
Sbjct: 262 A-SGLFDKMV-EIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLL 319
Query: 493 LDEV-KQKHMYDAAEKIEAVMKK 514
+ + + M +A + I+ + KK
Sbjct: 320 VHALFMEGRMGEADDMIKEMRKK 342
>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
Length = 757
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 108/403 (26%), Positives = 200/403 (49%), Gaps = 10/403 (2%)
Query: 100 HYLVNKLIH--RFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALL 157
++ +L+H R ++D + + +F WA P ++ SS I++ ++ LGK + D M+ +L
Sbjct: 53 NFTPTQLLHSLRREEDSSAVIHLFYWASKQPNFKPSSSIFKEVLHKLGKAGEFDAMKDIL 112
Query: 158 EEMSKG-HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGT-FGLEKNTETMNLLLDTLCK 215
+EM ++ +++ + ++ G + + ++ D + FG+ NT N LL+ L
Sbjct: 113 KEMKISLSVIDNDSLLVFIESYASFGLYNEILQFVDAMEVEFGVVANTHFYNFLLNVLVD 172
Query: 216 EGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVIS 274
K++L + S I P+ TFNI I C+ +++ A ++EM+ G P +
Sbjct: 173 GNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKT 232
Query: 275 YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
++TI+Q + + N + ++M GC VT +++ K G EEA+R E+M
Sbjct: 233 FTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMS 292
Query: 335 IV-GSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
+ G PD FN L+ L + V+ A+ V + + E G PD T+N++I+ G
Sbjct: 293 LREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLRE-GFDPDIYTYNSLISGLCKLGE 351
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
++A VL +M + C PN T++ ++ + K + +E ++L + K L D+ T
Sbjct: 352 VDEAVKVLNQMIE-RDCSPNTVTYNTIISTLCKENQVEEA-TKLALVLTGKGILP-DVCT 408
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV 496
Y +I GLC + A L+KEM P T +++D +
Sbjct: 409 YNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSL 451
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/428 (24%), Positives = 195/428 (45%), Gaps = 49/428 (11%)
Query: 129 GYEHSSEIYEMMVDILGKV----RQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQW 184
G+ + M+V+ L K ++ M +L E I T N++ + + G+
Sbjct: 296 GFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKL---GEV 352
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIP-------- 234
++AV+ +++ NT T N ++ TLCKE +VE A + L L K +P
Sbjct: 353 DEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSL 412
Query: 235 --------------------------PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGC 268
P+ T+N+ I C ++ EA ++EM+ GC
Sbjct: 413 IQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGC 472
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
VI+Y+T+I +C+ ++ E+ D+M+ QG N VTY T++ L KS EEA +
Sbjct: 473 ARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQ 532
Query: 329 ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF 388
+ ++M + G +PD +N L+ +A +++A + Q M +G PD T+ T+I
Sbjct: 533 LMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQT-MASDGCEPDIVTYGTLIAGL 591
Query: 389 SHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
G E A +L + +++ ++P++++ F+ ++ E + +L +M+ K +
Sbjct: 592 CKAGRVEAATKLLRTI-QMKGINLTPHAYNPVIQALFRRKRSKEAV-RLFREMIEKAE-A 648
Query: 449 LDITTYTLVIHGLCRANK-CEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEK 507
D TY +V GLC+ A EM+ P + + ++ + + M K
Sbjct: 649 PDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFYMLAEGLFSLAMVGTLIK 708
Query: 508 -IEAVMKK 514
I+ VM+K
Sbjct: 709 LIDMVMEK 716
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 169/345 (48%), Gaps = 41/345 (11%)
Query: 178 FSGAGQWEDAVRTFDELGTF-GLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPP 235
F G+ E+A+R +E+ G + T N+L++ L K G V+ A V + L+ P
Sbjct: 275 FCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDP 334
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
+ +T+N I G CK+ VDEA + +M C P ++Y+TII + C++ + +L
Sbjct: 335 DIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLA 394
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
+ +G P+V TY +++ L S + A+ + ++MK G PD +N LI +L
Sbjct: 395 LVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFR 454
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQ 415
++QEA+ + + EM +G A + T+NT+I F + +A + ++M +L+ N
Sbjct: 455 GKLQEALNLLK-EMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQM-ELQGVSRNSV 512
Query: 416 TFHPLLKSCFKTGKTDECLSQLLDDMVNKH-------HLSL------------------- 449
T++ L+ K+ + +E SQL+D M+ + + SL
Sbjct: 513 TYNTLIDGLCKSERVEEA-SQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQT 571
Query: 450 --------DITTYTLVIHGLCRANKCEWAYLLFK--EMIGHDITP 484
DI TY +I GLC+A + E A L + +M G ++TP
Sbjct: 572 MASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTP 616
>gi|255660912|gb|ACU25625.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 481
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 194/389 (49%), Gaps = 14/389 (3%)
Query: 100 HYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEE 159
H LV ++H K + AL FRW +EH+ E + +++ILG+ +++ R +L +
Sbjct: 12 HELVYNVLHSAKTS-EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLD 70
Query: 160 M-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
M KG + ++ + G +++V+ FD + G+E+ ++ + L + + G+
Sbjct: 71 MPKKGLEWDEDMWVMMIDSYGKQGIVQESVKLFDRMEELGVERTIKSYDALFKVILRRGR 130
Query: 219 VELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
+A+ F + L I P HTFN+ I G+ +V+ A ++MK P V++Y+T
Sbjct: 131 YMMAKRYFNKMLSEGIEPTRHTFNVLIWGFFLSGKVETANRFFEDMKSREISPDVVTYNT 190
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+I Y R + + EM+ + P VVTYTT++ ++A+R+ E+MK G
Sbjct: 191 MINGYYRVKKMXEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFG 250
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP-DTSTFNTMITMFSHHGHHEK 396
KP++ ++ L+ L A ++ EA + + EM + +AP D S F +IT GH +
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMSEARSILK-EMMDKYLAPTDNSIFMRLITSQCKSGHLDA 309
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK-------HHLSL 449
A VL+ M +L + L+++ K G+ D+ + +LLD ++ K L L
Sbjct: 310 ASDVLKAMIRLS-VPTEAGHYGVLIENFCKAGQYDQAV-KLLDKVIEKDIILRPQSTLHL 367
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMI 478
+ + Y +I LC + A L ++++
Sbjct: 368 EPSAYNPMIEYLCNNGQAAKAETLVRQLL 396
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 126/267 (47%), Gaps = 6/267 (2%)
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
+ ++++ A+ + +M G + +I SY +Q + +L D M+ G +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKQGIVQESVKLFDRMEELGVERTIK 116
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
+Y + + + G + A R KM G +P FN LI+ + +V+ A ++ +
Sbjct: 117 SYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVLIWGFFLSGKVETANRFFE-D 175
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M ++PD T+NTMI + +A EM K + +P V T+ L+K
Sbjct: 176 MKSREISPDVVTYNTMINGYYRVKKMXEAEKYFVEM-KGRNIEPTVVTYTTLIKGYVSVD 234
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ D+ L +L+++M + + TY+ ++ GLC A K A + KEM+ + P +
Sbjct: 235 QVDDAL-RLVEEM-KGFGIKPNAITYSTLLPGLCNAEKMSEARSILKEMMDKYLAPTDNS 292
Query: 489 C--RLILDEVKQKHMYDAAEKIEAVMK 513
RLI + K H+ A++ ++A+++
Sbjct: 293 IFMRLITSQCKSGHLDAASDVLKAMIR 319
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 131/311 (42%), Gaps = 4/311 (1%)
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQ 257
E N ET +++ L + K+ AR + L++ K + + + + I + K V E+
Sbjct: 41 FEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKQGIVQESV 100
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
M+ G + SY + + R+ + ++M ++G P T+ ++
Sbjct: 101 KLFDRMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVLIWGF 160
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
SG E A R E MK PD +N +I R ++ EA Y VEM + P
Sbjct: 161 FLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMXEAEK-YFVEMKGRNIEPT 219
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
T+ T+I + + A ++EEM KPN T+ LL K E S +
Sbjct: 220 VVTYTTLIKGYVSVDQVDDALRLVEEMKGF-GIKPNAITYSTLLPGLCNAEKMSEARS-I 277
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVK 497
L +M++K+ D + + +I C++ + A + K MI + ++++
Sbjct: 278 LKEMMDKYLAPTDNSIFMRLITSQCKSGHLDAASDVLKAMIRLSVPTEAGHYGVLIENFC 337
Query: 498 QKHMYDAAEKI 508
+ YD A K+
Sbjct: 338 KAGQYDQAVKL 348
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 90/205 (43%), Gaps = 5/205 (2%)
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N T+ ++ L ++ A I M G + D + +I + G+ VQE+V ++
Sbjct: 44 NRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKQGIVQESVKLF 103
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
M E GV +++ + + G + A +M E +P TF+ L+ F
Sbjct: 104 D-RMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLS-EGIEPTRHTFNVLIWGFF 161
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
+GK E ++ +DM ++ +S D+ TY +I+G R K A F EM G +I P
Sbjct: 162 LSGKV-ETANRFFEDMKSRE-ISPDVVTYNTMINGYYRVKKMXEAEKYFVEMKGRNIEPT 219
Query: 486 YQT-CRLILDEVKQKHMYDAAEKIE 509
T LI V + DA +E
Sbjct: 220 VVTYTTLIKGYVSVDQVDDALRLVE 244
Score = 42.0 bits (97), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 78/210 (37%), Gaps = 28/210 (13%)
Query: 131 EHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFS----------- 179
E S + EMM L MR + + GH+ + + K M R S
Sbjct: 273 EARSILKEMMDKYLAPTDNSIFMRLITSQCKSGHLDAASDVLKAMIRLSVPTEAGHYGVL 332
Query: 180 -----GAGQWEDAVRTFDEL----------GTFGLEKNTETMNLLLDTLCKEGKVELARS 224
AGQ++ AV+ D++ T LE + N +++ LC G+ A +
Sbjct: 333 IENFCKAGQYDQAVKLLDKVIEKDIILRPQSTLHLEPSA--YNPMIEYLCNNGQAAKAET 390
Query: 225 VFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCR 284
+ +L + N I G + D A ++ M +Y +++QSY +
Sbjct: 391 LVRQLLKLGVQDPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYDSLVQSYLK 450
Query: 285 QYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
+ + LD M P+ + +VM
Sbjct: 451 KNEPADAKAALDSMIENDHLPDSALFRSVM 480
>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
Length = 948
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 193/409 (47%), Gaps = 40/409 (9%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
+Y+ ++ L + + LL EM G +NT V+R G G+ +A R D +
Sbjct: 212 LYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRM 271
Query: 195 GTFGLEKNTETMNLLLDTLCK-------------------------------EGKVELAR 223
T G T LL LC+ EGK+ A
Sbjct: 272 MTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEAT 331
Query: 224 SVF--LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQS 281
++ + LK C P+AHT++I +HG CK+ R+ A ++EM+ G P V++Y+ ++ S
Sbjct: 332 ELYETMGLKGC-QPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHS 390
Query: 282 YCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPD 341
+C+ + LL+EM A+G N Y ++ L K G +EA+ + ++M+ G PD
Sbjct: 391 FCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPD 450
Query: 342 SRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVL 401
+N +IY L +++EA ++++ + E GV + T+NT+I G + A +
Sbjct: 451 ICSYNTIIYHLCNNEQMEEAEHMFE-NLLEEGVVANGITYNTIIHALLRDGRWQDAVRLA 509
Query: 402 EEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGL 461
+EM L C +V +++ L+K+ K G D L LL++M K + + +Y ++I L
Sbjct: 510 KEM-ILHGCSLDVVSYNGLIKAMCKDGNVDRSLV-LLEEMAEK-GIKPNNVSYNILISEL 566
Query: 462 CRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIE 509
C+ + A L K+M+ + P T +++ + K M+ A +E
Sbjct: 567 CKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLE 615
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 193/381 (50%), Gaps = 9/381 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGT 196
Y ++ L +VRQ D+ RA+L + + ++V NT V+ G+ +A ++ +G
Sbjct: 283 YGFLLQGLCRVRQADEARAMLGRVPELNVVLFNT---VIGGCLAEGKLAEATELYETMGL 339
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDE 255
G + + T ++L+ LCK G++ A + E+ K PN T+ I +H +CK D+
Sbjct: 340 KGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDD 399
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
+ ++EM G Y+ +I + C+ + L+ EM++QGC P++ +Y T++
Sbjct: 400 TRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIY 459
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
+L + EEA + E + G + +N +I+ L R R Q+AV + + EM +G +
Sbjct: 460 HLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAK-EMILHGCS 518
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS 435
D ++N +I G+ +++ +LEEM + + KPN +++ L+ K + + L
Sbjct: 519 LDVVSYNGLIKAMCKDGNVDRSLVLLEEMAE-KGIKPNNVSYNILISELCKERRVRDAL- 576
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD- 494
+L M+N+ L+ DI TY +I+GLC+ A L +++ ++ P T +++
Sbjct: 577 ELSKQMLNQG-LAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISW 635
Query: 495 EVKQKHMYDAAEKIEAVMKKL 515
K + + DAA + M +
Sbjct: 636 HCKVRLLDDAAMLLNRAMAAV 656
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 160/314 (50%), Gaps = 12/314 (3%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G + + Y +++ L K+ ++ LL EM KG + T V+ F G W+D
Sbjct: 341 GCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDT 400
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHG 246
+E+ GL N++ N ++ LCK+G+++ A + E++S P+ ++N I+
Sbjct: 401 RALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYH 460
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C +++EA+ + + G I+Y+TII + R + L EM GC +
Sbjct: 461 LCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLD 520
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
VV+Y ++ + K G+ + ++ + E+M G KP++ +N LI L + RV++A+ + +
Sbjct: 521 VVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSK 580
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
+M G+APD T+NT+I G A ++LE+++ E+ P++ T++ L+
Sbjct: 581 -QMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHN-ENVHPDIITYNILI----- 633
Query: 427 TGKTDECLSQLLDD 440
+ C +LLDD
Sbjct: 634 ---SWHCKVRLLDD 644
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 141/304 (46%), Gaps = 11/304 (3%)
Query: 187 AVRTFDELGT-FGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIF 243
A+ D+L FG++ + + N++L L + A +++ + + +PP TF +
Sbjct: 122 ALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVA 181
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
C++ R +EA ++ M HGC P + Y T+I + C Q ++ LL+EM GC
Sbjct: 182 ARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGC 241
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
+V T+ V+ + G EA R+ ++M G P + L+ L R + EA
Sbjct: 242 AADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARA 301
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
+ +PE V FNT+I G +A + E M L+ C+P+ T+ L+
Sbjct: 302 MLG-RVPELNVV----LFNTVIGGCLAEGKLAEATELYETMG-LKGCQPDAHTYSILMHG 355
Query: 424 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
K G+ + +LL +M K + ++ TYT+V+H C+ + L +EM +T
Sbjct: 356 LCKLGRISSAV-RLLREM-EKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLT 413
Query: 484 PRYQ 487
Q
Sbjct: 414 LNSQ 417
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 78/185 (42%), Gaps = 39/185 (21%)
Query: 156 LLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRT------------------------- 190
LLEE + +T NTI + R G+W+DAVR
Sbjct: 477 LLEEGVVANGITYNTIIHALLR---DGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCK 533
Query: 191 ----------FDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHT 239
+E+ G++ N + N+L+ LCKE +V A + + L + P+ T
Sbjct: 534 DGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVT 593
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+N I+G CK+ + A ++++ HP +I+Y+ +I +C+ LL+
Sbjct: 594 YNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAM 653
Query: 300 AQGCP 304
A CP
Sbjct: 654 AAVCP 658
>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 118/431 (27%), Positives = 208/431 (48%), Gaps = 21/431 (4%)
Query: 82 EVFQSLKQDHVCNAIQPSHYLVNKLIHRFK-----DDWKSALGIFRWAGSCPGYEHSSEI 136
E+F+ L++ N P Y N +I + D+ S L R GS P S
Sbjct: 294 EMFEHLEK----NRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIP----SVIA 345
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGT 196
Y ++ L K+ ++D+ + EEM K L+T ++ AG+ + A D +
Sbjct: 346 YNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQK 405
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVD 254
GL N T+N+++D LCK K++ A ++F E+ K C P + TF I G K+ RVD
Sbjct: 406 AGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTP-DEITFCSLIDGLGKVGRVD 464
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
+A ++M C I Y+++I+++ +++ +M Q C P++ T M
Sbjct: 465 DAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYM 524
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
+ K+G+ E+ + E++K PD+R ++ LI+ L +A E ++ M E G
Sbjct: 525 DCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELF-YSMKEQGC 583
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
DT +N +I F G KA+ +LEEM K + +P V T+ ++ K + DE
Sbjct: 584 VLDTRAYNIVIDGFCKCGKVNKAYQLLEEM-KTKGFEPTVVTYGSVIDGLAKIDRLDE-- 640
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
+ +L + + L++ Y+ +I G + + + AYL+ +E++ +TP T +LD
Sbjct: 641 AYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLD 700
Query: 495 E-VKQKHMYDA 504
VK + + +A
Sbjct: 701 ALVKAEEINEA 711
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 182/412 (44%), Gaps = 41/412 (9%)
Query: 140 MVDILGKVRQMDQMRALLEEMSKGHIVTLNTI-AKVMRRFSGAGQWEDAVRTFDELGTFG 198
++D LGKV ++D + E+M T + + +++ F G+ ED + + ++
Sbjct: 453 LIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQN 512
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQ 257
+ + +N +D + K G+ E R++F E+K+ P+A +++I IHG K +E
Sbjct: 513 CSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETY 572
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
MK GC +Y+ +I +C+ +K Y+LL+EM+ +G P VVTY +V+ L
Sbjct: 573 ELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGL 632
Query: 318 AK-----------------------------------SGDFEEAIRITEKMKIVGSKPDS 342
AK G +EA I E++ G P+
Sbjct: 633 AKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNL 692
Query: 343 RFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLE 402
+N L+ L +A + EA+ +Q M E P+ T+ +I KAF +
Sbjct: 693 YTWNSLLDALVKAEEINEALVCFQ-SMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQ 751
Query: 403 EMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC 462
EM K + KP+ ++ ++ K G E + L D + D Y +I GL
Sbjct: 752 EMQK-QGMKPSTISYTTMISGLAKAGNIAE--AGALFDRFKANGGVPDSACYNAMIEGLS 808
Query: 463 RANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
N+ A+ LF+E + +TC ++LD + + + A + AV+++
Sbjct: 809 NGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRE 860
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 181/416 (43%), Gaps = 8/416 (1%)
Query: 95 AIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMR 154
+ +P V ++ R KD A+ FRW H E Y ++ ++ + R D +
Sbjct: 60 SFKPQPEFVIGVLRRLKD-VNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALD 118
Query: 155 ALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTL 213
+L EMS G ++NT +++ A + + + F L+
Sbjct: 119 QILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAF 178
Query: 214 CKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCV 272
++ ++F +++ P H F I G+ K RVD A + EMK +
Sbjct: 179 SAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADI 238
Query: 273 ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEK 332
+ Y+ I S+ + ++ E++A G P+ VTYT+++ L K+ +EA+ + E
Sbjct: 239 VLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEH 298
Query: 333 MKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
++ P + +N +I G A + EA + + + + G P +N ++T G
Sbjct: 299 LEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAK-GSIPSVIAYNCILTCLRKMG 357
Query: 393 HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
++A V EEM K PN+ T++ L+ + GK D L D + K L ++
Sbjct: 358 KVDEALKVFEEMKK--DAAPNLSTYNILIDMLCRAGKLDTAFE--LRDSMQKAGLFPNVR 413
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
T +++ LC++ K + A +F+EM TP T ++D + + D A K+
Sbjct: 414 TVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKV 469
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 162/378 (42%), Gaps = 5/378 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVM-RRFSGAGQWEDA 187
G + Y M+ +L K ++D+ + E + K V M + AG++++A
Sbjct: 268 GLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEA 327
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGW 247
+ G + N +L L K GKV+ A VF E+K PN T+NI I
Sbjct: 328 YSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDML 387
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
C+ ++D A M+ G P V + + ++ C+ + + +EM + C P+
Sbjct: 388 CRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDE 447
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
+T+ +++ L K G ++A ++ EKM + +S + LI R ++ +Y+
Sbjct: 448 ITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYK- 506
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKT 427
+M +PD NT + G EK + EE+ K P+ +++ L+ K
Sbjct: 507 DMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEI-KARRFVPDARSYSILIHGLIKA 565
Query: 428 GKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
G +E +L M + LD Y +VI G C+ K AY L +EM P
Sbjct: 566 GFANETY-ELFYSM-KEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVV 623
Query: 488 TCRLILDEVKQKHMYDAA 505
T ++D + + D A
Sbjct: 624 TYGSVIDGLAKIDRLDEA 641
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 166/341 (48%), Gaps = 7/341 (2%)
Query: 33 SHIVSSSPIESYCSDGARLDHHQVL--CVDSPRLPDIDVIISKVH--VGSSEDEVFQSLK 88
+ IV +S I+++ + G + D H++ ++ PD+ ++ + + + E E +++
Sbjct: 481 NSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMF 540
Query: 89 QDHVCNAIQPSHYLVNKLIHRF-KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKV 147
++ P + LIH K + + ++ G + Y +++D K
Sbjct: 541 EEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKC 600
Query: 148 RQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETM 206
++++ LLEEM +KG T+ T V+ + + ++A F+E + +E N
Sbjct: 601 GKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIY 660
Query: 207 NLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKG 265
+ L+D K G+++ A + EL + + PN +T+N + K ++EA Q MK
Sbjct: 661 SSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKE 720
Query: 266 HGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEE 325
C P ++Y +I C+ F+K + EMQ QG P+ ++YTT++S LAK+G+ E
Sbjct: 721 LKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAE 780
Query: 326 AIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
A + ++ K G PDS +N +I L +R +A +++
Sbjct: 781 AGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFE 821
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 183/398 (45%), Gaps = 17/398 (4%)
Query: 94 NAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMD 151
+ +QP+ ++ K D SAL + R + IY ++D L K +
Sbjct: 213 DGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHS 272
Query: 152 QMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLL 210
+ L EM KG L T ++ F +G+W DA + E+ + + T N L+
Sbjct: 273 DAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALI 332
Query: 211 DTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCH 269
+ KEGK A ++ E L I PN T++ I G+CK NR+D A+ M GC
Sbjct: 333 NAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCS 392
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI 329
P +I+++T+I YC ELL EM G + TY T++ GD A+ +
Sbjct: 393 PNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDL 452
Query: 330 TEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM----------PENGVAPDTS 379
++M G PD + L+ L ++++A+ +++V P NGV PD
Sbjct: 453 LQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQ 512
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLD 439
T+N +I+ + G +A + EEM P+ T+ ++ K + DE +Q+ D
Sbjct: 513 TYNILISGLINEGKFLEAEELYEEMPH-RGIVPDTITYSSMIDGLCKQSRLDEA-TQMFD 570
Query: 440 DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
M +K S ++ T+T +I+G C+A + + LF EM
Sbjct: 571 SMGSK-SFSPNVVTFTTLINGYCKAGRVDDGLELFCEM 607
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/412 (25%), Positives = 185/412 (44%), Gaps = 40/412 (9%)
Query: 140 MVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
++ ++ ++ + D + +L ++M + I + + +++ F + A+ TF ++ G
Sbjct: 85 LMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLG 144
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQ 257
L + T N LL LC E +V A ++F ++ ++ PN TF ++G C+ R+ EA
Sbjct: 145 LHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAV 204
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM-QAQGCPPNVVTYTTVMSY 316
+ M G P I+Y TI+ C++ + LL +M + PNVV Y+ ++
Sbjct: 205 ALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDS 264
Query: 317 LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
L K G +A + +M+ G PD +N +I + R +A + Q EM E ++P
Sbjct: 265 LCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQ-EMLERKISP 323
Query: 377 DTSTFNTMITMFSHHGHHEKAFHVLEEM----------------------NKL---EH-- 409
D T+N +I F G +A + +EM N+L EH
Sbjct: 324 DVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMF 383
Query: 410 -------CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC 462
C PN+ TF+ L+ + D+ + +LL +M + L D TTY +IHG
Sbjct: 384 YLMATKGCSPNLITFNTLIDGYCGAKRIDDGM-ELLHEM-TETGLVADTTTYNTLIHGFY 441
Query: 463 RANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
A L +EMI + P TC +LD + A ++ VM+K
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQK 493
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 112/439 (25%), Positives = 201/439 (45%), Gaps = 26/439 (5%)
Query: 95 AIQPSHYLVNKLIHRF--KDDWKSALGIFR--WAGSCPGYEHSSEIYEMMVDILGKVRQM 150
+ P N L+H +D AL +F + +C + + +++ L + ++
Sbjct: 144 GLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTC---RPNVVTFTTLMNGLCREGRI 200
Query: 151 DQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETM 206
+ ALL+ M + + +T TI M + + +R +E+ + N
Sbjct: 201 VEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSH--IIPNVVIY 258
Query: 207 NLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKG 265
+ ++D+LCK+G+ A+++F E++ I P+ T+N I G+C R +A+ +QEM
Sbjct: 259 SAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLE 318
Query: 266 HGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEE 325
P V++Y+ +I ++ ++ F + EL DEM +G PN +TY++++ K +
Sbjct: 319 RKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDA 378
Query: 326 AIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMI 385
A + M G P+ FN LI A R+ + + + EM E G+ DT+T+NT+I
Sbjct: 379 AEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLH-EMTETGLVADTTTYNTLI 437
Query: 386 TMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL-------- 437
F G A +L+EM C P++ T LL GK + L
Sbjct: 438 HGFYLVGDLNAALDLLQEMISSGLC-PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496
Query: 438 -LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV 496
LD + + D+ TY ++I GL K A L++EM I P T ++D +
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556
Query: 497 -KQKHMYDAAEKIEAVMKK 514
KQ + +A + +++ K
Sbjct: 557 CKQSRLDEATQMFDSMGSK 575
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 175/385 (45%), Gaps = 19/385 (4%)
Query: 38 SSPIESYCSDGARLDHHQVL--CVDSPRLPDIDVIISKVHVGSSEDEVFQS--LKQDHVC 93
+S I +CS G D Q+L ++ PD+ + ++ E + F++ L + +
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353
Query: 94 NAIQPSHYLVNKLIHRF-KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQ 152
I P+ + +I F K + A + + G + + ++D +++D
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDD 413
Query: 153 MRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLD 211
LL EM++ G + T ++ F G A+ E+ + GL + T + LLD
Sbjct: 414 GMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLD 473
Query: 212 TLCKEGKVELARSVFLELK------------SCIPPNAHTFNIFIHGWCKINRVDEAQWT 259
LC GK++ A +F ++ + + P+ T+NI I G + EA+
Sbjct: 474 GLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEEL 533
Query: 260 IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK 319
+EM G P I+YS++I C+Q + ++ D M ++ PNVVT+TT+++ K
Sbjct: 534 YEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCK 593
Query: 320 SGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTS 379
+G ++ + + +M G ++ + LI + + A+ ++Q EM +GV PDT
Sbjct: 594 AGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQ-EMISSGVYPDTI 652
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEM 404
T M+T ++A +LE++
Sbjct: 653 TIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 145/316 (45%), Gaps = 46/316 (14%)
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
+ ++F I I +C +++ A T ++ G HP V++++T++ C + S+ L
Sbjct: 113 DIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLF 172
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK---------------- 339
+M C PNVVT+TT+M+ L + G EA+ + ++M G +
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232
Query: 340 --------------------PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTS 379
P+ ++ +I +L + R +A ++ EM E G+ PD
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLF-TEMQEKGIFPDLF 291
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLD 439
T+N+MI F G A +L+EM + P+V T++ L+ + K GK E +L D
Sbjct: 292 TYNSMIVGFCSSGRWSDAEQLLQEMLE-RKISPDVVTYNALINAFVKEGKFFEA-EELYD 349
Query: 440 DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQK 499
+M+ + + + TY+ +I G C+ N+ + A +F M +P T ++D
Sbjct: 350 EMLPRGIIP-NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDG---- 404
Query: 500 HMYDAAEKIEAVMKKL 515
Y A++I+ M+ L
Sbjct: 405 --YCGAKRIDDGMELL 418
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 116/247 (46%), Gaps = 16/247 (6%)
Query: 104 NKLIHRFK--DDWKSALGIFR---WAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLE 158
N LIH F D +AL + + +G CP + + + D GK++ +M +++
Sbjct: 434 NTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDN-GKLKDALEMFKVMQ 492
Query: 159 EMSK---------GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLL 209
+ K G + T ++ G++ +A ++E+ G+ +T T + +
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552
Query: 210 LDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGC 268
+D LCK+ +++ A +F + S PN TF I+G+CK RVD+ EM G
Sbjct: 553 IDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGI 612
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
I+Y T+I + + N + ++ EM + G P+ +T +++ L + + A+
Sbjct: 613 VANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVA 672
Query: 329 ITEKMKI 335
+ EK+++
Sbjct: 673 MLEKLQM 679
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/304 (20%), Positives = 123/304 (40%), Gaps = 37/304 (12%)
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G+ +I +++A +M P V+ + ++ R V L +M+ +
Sbjct: 53 GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
++ ++T ++ A+ K+ +G PD FN L++ L RV EA+ ++
Sbjct: 113 DIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLF 172
Query: 366 Q---------------------------VE-------MPENGVAPDTSTFNTMITMFSHH 391
VE M E+G+ P T+ T++
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232
Query: 392 GHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDI 451
G A ++L +M ++ H PNV + ++ S K G+ + L +M K D+
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDA-QNLFTEMQEKGIFP-DL 290
Query: 452 TTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE-VKQKHMYDAAEKIEA 510
TY +I G C + + A L +EM+ I+P T +++ VK+ ++A E +
Sbjct: 291 FTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDE 350
Query: 511 VMKK 514
++ +
Sbjct: 351 MLPR 354
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 183/398 (45%), Gaps = 17/398 (4%)
Query: 94 NAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMD 151
+ +QP+ ++ K D SAL + R + IY ++D L K +
Sbjct: 213 DGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHS 272
Query: 152 QMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLL 210
+ L EM KG L T ++ F +G+W DA + E+ + + T N L+
Sbjct: 273 DAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALI 332
Query: 211 DTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCH 269
+ KEGK A ++ E L I PN T++ I G+CK NR+D A+ M GC
Sbjct: 333 NAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCS 392
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI 329
P +I+++T+I YC ELL EM G + TY T++ GD A+ +
Sbjct: 393 PNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDL 452
Query: 330 TEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM----------PENGVAPDTS 379
++M G PD + L+ L ++++A+ +++V P NGV PD
Sbjct: 453 LQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQ 512
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLD 439
T+N +I+ + G +A + EEM P+ T+ ++ K + DE +Q+ D
Sbjct: 513 TYNILISGLINEGKFLEAEELYEEMPH-RGIVPDTITYSSMIDGLCKQSRLDEA-TQMFD 570
Query: 440 DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
M +K S ++ T+T +I+G C+A + + LF EM
Sbjct: 571 SMGSK-SFSPNVVTFTTLINGYCKAGRVDDGLELFCEM 607
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 156/324 (48%), Gaps = 13/324 (4%)
Query: 202 NTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTI 260
N + ++D+LCK+G+ A+++F E++ I P+ T+N I G+C R +A+ +
Sbjct: 254 NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLL 313
Query: 261 QEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKS 320
QEM P V++Y+ +I ++ ++ F + EL DEM +G PN +TY++++ K
Sbjct: 314 QEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQ 373
Query: 321 GDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTST 380
+ A + M G P+ FN LI A R+ + + + EM E G+ DT+T
Sbjct: 374 NRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLH-EMTETGLVADTTT 432
Query: 381 FNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL--- 437
+NT+I F G A +L+EM C P++ T LL GK + L
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGLC-PDIVTCDTLLDGLCDNGKLKDALEMFKVM 491
Query: 438 ------LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRL 491
LD + + D+ TY ++I GL K A L++EM I P T
Sbjct: 492 QKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSS 551
Query: 492 ILDEV-KQKHMYDAAEKIEAVMKK 514
++D + KQ + +A + +++ K
Sbjct: 552 MIDGLCKQSRLDEATQMFDSMGSK 575
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 184/412 (44%), Gaps = 40/412 (9%)
Query: 140 MVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
++ ++ ++ + D + +L ++M + I + + +++ F + A+ TF ++ G
Sbjct: 85 LMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLG 144
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQ 257
L + T LL LC E +V A ++F ++ ++ PN TF ++G C+ R+ EA
Sbjct: 145 LHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAV 204
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ-AQGCPPNVVTYTTVMSY 316
+ M G P I+Y TI+ C++ + LL +M+ PNVV Y+ ++
Sbjct: 205 ALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDS 264
Query: 317 LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
L K G +A + +M+ G PD +N +I + R +A + Q EM E ++P
Sbjct: 265 LCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQ-EMLERKISP 323
Query: 377 DTSTFNTMITMFSHHGHHEKAFHVLEEM----------------------NKL---EH-- 409
D T+N +I F G +A + +EM N+L EH
Sbjct: 324 DVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMF 383
Query: 410 -------CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC 462
C PN+ TF+ L+ + D+ + +LL +M + L D TTY +IHG
Sbjct: 384 YLMATKGCSPNLITFNTLIDGYCGAKRIDDGM-ELLHEM-TETGLVADTTTYNTLIHGFY 441
Query: 463 RANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
A L +EMI + P TC +LD + A ++ VM+K
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQK 493
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 175/385 (45%), Gaps = 19/385 (4%)
Query: 38 SSPIESYCSDGARLDHHQVL--CVDSPRLPDIDVIISKVHVGSSEDEVFQS--LKQDHVC 93
+S I +CS G D Q+L ++ PD+ + ++ E + F++ L + +
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353
Query: 94 NAIQPSHYLVNKLIHRF-KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQ 152
I P+ + +I F K + A + + G + + ++D +++D
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDD 413
Query: 153 MRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLD 211
LL EM++ G + T ++ F G A+ E+ + GL + T + LLD
Sbjct: 414 GMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLD 473
Query: 212 TLCKEGKVELARSVFLELK------------SCIPPNAHTFNIFIHGWCKINRVDEAQWT 259
LC GK++ A +F ++ + + P+ T+NI I G + EA+
Sbjct: 474 GLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEEL 533
Query: 260 IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK 319
+EM G P I+YS++I C+Q + ++ D M ++ PNVVT+TT+++ K
Sbjct: 534 YEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCK 593
Query: 320 SGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTS 379
+G ++ + + +M G ++ + LI + + A+ ++Q EM +GV PDT
Sbjct: 594 AGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQ-EMISSGVYPDTI 652
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEM 404
T M+T ++A +LE++
Sbjct: 653 TIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 146/316 (46%), Gaps = 46/316 (14%)
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
+ ++FNI I +C +++ A T ++ G HP V++++T++ C + S+ L
Sbjct: 113 DIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLF 172
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK---------------- 339
+M C PNVVT+TT+M+ L + G EA+ + ++M G +
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232
Query: 340 --------------------PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTS 379
P+ ++ +I +L + R +A ++ EM E G+ PD
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLF-TEMQEKGIFPDLF 291
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLD 439
T+N+MI F G A +L+EM + P+V T++ L+ + K GK E +L D
Sbjct: 292 TYNSMIVGFCSSGRWSDAEQLLQEMLE-RKISPDVVTYNALINAFVKEGKFFEA-EELYD 349
Query: 440 DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQK 499
+M+ + + + TY+ +I G C+ N+ + A +F M +P T ++D
Sbjct: 350 EMLPRGIIP-NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDG---- 404
Query: 500 HMYDAAEKIEAVMKKL 515
Y A++I+ M+ L
Sbjct: 405 --YCGAKRIDDGMELL 418
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 116/247 (46%), Gaps = 16/247 (6%)
Query: 104 NKLIHRFK--DDWKSALGIFR---WAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLE 158
N LIH F D +AL + + +G CP + + + D GK++ +M +++
Sbjct: 434 NTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDN-GKLKDALEMFKVMQ 492
Query: 159 EMSK---------GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLL 209
+ K G + T ++ G++ +A ++E+ G+ +T T + +
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552
Query: 210 LDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGC 268
+D LCK+ +++ A +F + S PN TF I+G+CK RVD+ EM G
Sbjct: 553 IDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGI 612
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
I+Y T+I + + N + ++ EM + G P+ +T +++ L + + A+
Sbjct: 613 VANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVA 672
Query: 329 ITEKMKI 335
+ EK+++
Sbjct: 673 MLEKLQM 679
>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06710, mitochondrial; Flags: Precursor
gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
Length = 987
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 174/375 (46%), Gaps = 23/375 (6%)
Query: 158 EEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEG 217
E + +G I +T +KV+ A + E A F+E+ GL + T +++D+ CK G
Sbjct: 473 EMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAG 532
Query: 218 KVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYS 276
+E AR F E++ PN T+ IH + K +V A + M GC P +++YS
Sbjct: 533 LIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYS 592
Query: 277 TIIQSYCRQYNFSKVYELLDEM-QAQGCP---------------PNVVTYTTVMSYLAKS 320
+I +C+ K ++ + M ++ P PNVVTY ++ KS
Sbjct: 593 ALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKS 652
Query: 321 GDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTST 380
EEA ++ + M + G +P+ ++ LI L + ++ EA V + EM E+G T
Sbjct: 653 HRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV-KTEMSEHGFPATLYT 711
Query: 381 FNTMITMFSHHGHHEKAFHVLEEMNKLEH-CKPNVQTFHPLLKSCFKTGKTDECLSQLLD 439
++++I + + A VL +M LE+ C PNV + ++ K GKTDE L
Sbjct: 712 YSSLIDRYFKVKRQDLASKVLSKM--LENSCAPNVVIYTEMIDGLCKVGKTDEAYK--LM 767
Query: 440 DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQK 499
M+ + ++ TYT +I G K E L + M + P Y T R+++D +
Sbjct: 768 QMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKN 827
Query: 500 HMYDAAEKIEAVMKK 514
D A + MK+
Sbjct: 828 GALDVAHNLLEEMKQ 842
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 183/409 (44%), Gaps = 56/409 (13%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL- 194
Y ++ K +++ L E M S+G + + T + ++ AGQ E A + F+ +
Sbjct: 556 YTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMC 615
Query: 195 GTFGL----------EKNTETMNL-----LLDTLCKEGKVELARSVF--LELKSCIPPNA 237
G+ + + N+E N+ LLD CK +VE AR + + ++ C PN
Sbjct: 616 GSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGC-EPNQ 674
Query: 238 HTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDE 297
++ I G CK+ ++DEAQ EM HG + +YS++I Y + ++L +
Sbjct: 675 IVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSK 734
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
M C PNVV YT ++ L K G +EA ++ + M+ G +P+ + +I G +
Sbjct: 735 MLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGK 794
Query: 358 VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTF 417
++ + + + M GVAP+ T+ +I +G + A ++LEEM K H + +
Sbjct: 795 IETCLELLE-RMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM-KQTHWPTHTAGY 852
Query: 418 HPLLKSCFK-----TGKTDE-----------CLSQLLDDMVNKHHLSLDI---------- 451
+++ K G DE L+D+++ L + +
Sbjct: 853 RKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFS 912
Query: 452 -------TTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT-CRLI 492
+TY +I LC ANK E A+ LF EM + P Q+ C LI
Sbjct: 913 ATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLI 961
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 112/477 (23%), Positives = 205/477 (42%), Gaps = 34/477 (7%)
Query: 47 DGARLDHHQVLCVDSPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQP-SHYLVNK 105
D ++ HQV+ + + D I V S D+VF Q + + S LV +
Sbjct: 81 DYGNVNVHQVVPIITQSSIDARAIADAV---SGVDDVFGRKSQKFLRQFREKLSESLVIE 137
Query: 106 LIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQM--RALLEEMSKG 163
++ R + + F WAG GY+H++ +Y +VD++ VR D+ L+++
Sbjct: 138 VL-RLIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLI--VRDDDEKVPEEFLQQIRDD 194
Query: 164 HIVTLNTIAKVM-RRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELA 222
V+ R+ G + A+ L F + T N L+ K +++ A
Sbjct: 195 DKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSA 254
Query: 223 RSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQS 281
+ E+ + + + T F + CK+ + EA T+ E + P + Y+ +I
Sbjct: 255 SLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREA-LTLVETENF--VPDTVFYTKLISG 311
Query: 282 YCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPD 341
C F + + L+ M+A C PNVVTY+T++ R+ M + G P
Sbjct: 312 LCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPS 371
Query: 342 SRFFNCLIYTLGRASRVQEAVYVYQV--EMPENGVAPDTSTFNTMITMFSHHGHH----- 394
+ FN L++ + + Y Y++ +M + G P +N +I
Sbjct: 372 PKIFNSLVHAYCTSG---DHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDL 428
Query: 395 ----EKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLD 450
EKA+ + + + K NV +F L S GK ++ S ++ +M+ + + D
Sbjct: 429 LDLAEKAYSEMLAAGVVLN-KINVSSFTRCLCS---AGKYEKAFS-VIREMIGQGFIP-D 482
Query: 451 ITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEK 507
+TY+ V++ LC A+K E A+LLF+EM + T +++D + + + A K
Sbjct: 483 TSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARK 539
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 151/324 (46%), Gaps = 10/324 (3%)
Query: 124 AGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAG 182
A S G E + +Y+ ++D L KV ++D+ + + EMS+ G TL T + ++ R+
Sbjct: 664 AMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVK 723
Query: 183 QWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTF 240
+ + A + ++ N ++D LCK GK + A + +E K C PN T+
Sbjct: 724 RQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGC-QPNVVTY 782
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
I G+ I +++ ++ M G P ++Y +I C+ + LL+EM+
Sbjct: 783 TAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQ 842
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
P + Y V+ K +F E++ + +++ + P + LI L +A R++
Sbjct: 843 THWPTHTAGYRKVIEGFNK--EFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEM 900
Query: 361 AVYVYQVEMPENGVAPD-TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
A+ + + + D +ST+N++I E AF + EM K + P +Q+F
Sbjct: 901 ALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTK-KGVIPEMQSFCS 959
Query: 420 LLKSCFKTGKTDECLSQLLDDMVN 443
L+K F+ K E L LL D ++
Sbjct: 960 LIKGLFRNSKISEAL--LLLDFIS 981
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 80/184 (43%), Gaps = 10/184 (5%)
Query: 125 GSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVT-LNTIAKVMRRFSGAGQ 183
G P Y Y +++D K +D LLEEM + H T KV+ F+ +
Sbjct: 809 GVAPNYV----TYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--E 862
Query: 184 WEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL---KSCIPPNAHTF 240
+ +++ DE+G LL+D L K ++E+A + E+ + + + T+
Sbjct: 863 FIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTY 922
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
N I C N+V+ A EM G P + S+ ++I+ R S+ LLD +
Sbjct: 923 NSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISH 982
Query: 301 QGCP 304
CP
Sbjct: 983 MVCP 986
>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
Length = 946
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 174/375 (46%), Gaps = 23/375 (6%)
Query: 158 EEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEG 217
E + +G I +T +KV+ A + E A F+E+ GL + T +++D+ CK G
Sbjct: 432 EMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAG 491
Query: 218 KVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYS 276
+E AR F E++ PN T+ IH + K +V A + M GC P +++YS
Sbjct: 492 LIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYS 551
Query: 277 TIIQSYCRQYNFSKVYELLDEM-QAQGCP---------------PNVVTYTTVMSYLAKS 320
+I +C+ K ++ + M ++ P PNVVTY ++ KS
Sbjct: 552 ALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKS 611
Query: 321 GDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTST 380
EEA ++ + M + G +P+ ++ LI L + ++ EA V + EM E+G T
Sbjct: 612 HRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV-KTEMSEHGFPATLYT 670
Query: 381 FNTMITMFSHHGHHEKAFHVLEEMNKLEH-CKPNVQTFHPLLKSCFKTGKTDECLSQLLD 439
++++I + + A VL +M LE+ C PNV + ++ K GKTDE L
Sbjct: 671 YSSLIDRYFKVKRQDLASKVLSKM--LENSCAPNVVIYTEMIDGLCKVGKTDEAYK--LM 726
Query: 440 DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQK 499
M+ + ++ TYT +I G K E L + M + P Y T R+++D +
Sbjct: 727 QMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKN 786
Query: 500 HMYDAAEKIEAVMKK 514
D A + MK+
Sbjct: 787 GALDVAHNLLEEMKQ 801
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 183/409 (44%), Gaps = 56/409 (13%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL- 194
Y ++ K +++ L E M S+G + + T + ++ AGQ E A + F+ +
Sbjct: 515 YTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMC 574
Query: 195 GTFGL----------EKNTETMNL-----LLDTLCKEGKVELARSVF--LELKSCIPPNA 237
G+ + + N+E N+ LLD CK +VE AR + + ++ C PN
Sbjct: 575 GSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGC-EPNQ 633
Query: 238 HTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDE 297
++ I G CK+ ++DEAQ EM HG + +YS++I Y + ++L +
Sbjct: 634 IVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSK 693
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
M C PNVV YT ++ L K G +EA ++ + M+ G +P+ + +I G +
Sbjct: 694 MLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGK 753
Query: 358 VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTF 417
++ + + + M GVAP+ T+ +I +G + A ++LEEM K H + +
Sbjct: 754 IETCLELLE-RMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM-KQTHWPTHTAGY 811
Query: 418 HPLLKSCFK-----TGKTDE-----------CLSQLLDDMVNKHHLSLDI---------- 451
+++ K G DE L+D+++ L + +
Sbjct: 812 RKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFS 871
Query: 452 -------TTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT-CRLI 492
+TY +I LC ANK E A+ LF EM + P Q+ C LI
Sbjct: 872 ATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLI 920
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 97/407 (23%), Positives = 179/407 (43%), Gaps = 29/407 (7%)
Query: 116 SALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQM--RALLEEMSKGHIVTLNTIAK 173
+ + F WAG GY+H++ +Y +VD++ VR D+ L+++
Sbjct: 106 AVISFFVWAGRQIGYKHTAPVYNALVDLI--VRDDDEKVPEEFLQQIRDDDKEVFGQFLN 163
Query: 174 VM-RRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-S 231
V+ R+ G + A+ L F + T N L+ K +++ A + E+ +
Sbjct: 164 VLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLA 223
Query: 232 CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKV 291
+ + T F + CK+ + EA T+ E + P + Y+ +I C F +
Sbjct: 224 NLRMDGFTLRCFAYSLCKVGKWREA-LTLVETENF--VPDTVFYTKLISGLCEASLFEEA 280
Query: 292 YELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYT 351
+ L+ M+A C PNVVTY+T++ R+ M + G P + FN L++
Sbjct: 281 MDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHA 340
Query: 352 LGRASRVQEAVYVYQV--EMPENGVAPDTSTFNTMITM---------FSHHGHHEKAFHV 400
+ + Y Y++ +M + G P +N +I F EKA+
Sbjct: 341 YCTSG---DHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSE 397
Query: 401 LEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHG 460
+ + + K NV +F L S GK ++ S ++ +M+ + + D +TY+ V++
Sbjct: 398 MLAAGVVLN-KINVSSFTRCLCS---AGKYEKAFS-VIREMIGQGFIP-DTSTYSKVLNY 451
Query: 461 LCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEK 507
LC A+K E A+LLF+EM + T +++D + + + A K
Sbjct: 452 LCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARK 498
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 151/324 (46%), Gaps = 10/324 (3%)
Query: 124 AGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAG 182
A S G E + +Y+ ++D L KV ++D+ + + EMS+ G TL T + ++ R+
Sbjct: 623 AMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVK 682
Query: 183 QWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTF 240
+ + A + ++ N ++D LCK GK + A + +E K C PN T+
Sbjct: 683 RQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGC-QPNVVTY 741
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
I G+ I +++ ++ M G P ++Y +I C+ + LL+EM+
Sbjct: 742 TAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQ 801
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
P + Y V+ K +F E++ + +++ + P + LI L +A R++
Sbjct: 802 THWPTHTAGYRKVIEGFNK--EFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEM 859
Query: 361 AVYVYQVEMPENGVAPD-TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
A+ + + + D +ST+N++I E AF + EM K + P +Q+F
Sbjct: 860 ALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTK-KGVIPEMQSFCS 918
Query: 420 LLKSCFKTGKTDECLSQLLDDMVN 443
L+K F+ K E L LL D ++
Sbjct: 919 LIKGLFRNSKISEAL--LLLDFIS 940
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 80/184 (43%), Gaps = 10/184 (5%)
Query: 125 GSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVT-LNTIAKVMRRFSGAGQ 183
G P Y Y +++D K +D LLEEM + H T KV+ F+ +
Sbjct: 768 GVAPNYV----TYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--E 821
Query: 184 WEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL---KSCIPPNAHTF 240
+ +++ DE+G LL+D L K ++E+A + E+ + + + T+
Sbjct: 822 FIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTY 881
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
N I C N+V+ A EM G P + S+ ++I+ R S+ LLD +
Sbjct: 882 NSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISH 941
Query: 301 QGCP 304
CP
Sbjct: 942 MVCP 945
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 183/398 (45%), Gaps = 17/398 (4%)
Query: 94 NAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMD 151
+ +QP+ ++ K D SAL + R + IY ++D L K +
Sbjct: 213 DGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHS 272
Query: 152 QMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLL 210
+ L EM KG L T ++ F +G+W DA + E+ + + T N L+
Sbjct: 273 DAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALI 332
Query: 211 DTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCH 269
+ KEGK A ++ E L I PN T++ I G+CK NR+D A+ M GC
Sbjct: 333 NAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCS 392
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI 329
P +I+++T+I YC ELL EM G + TY T++ GD A+ +
Sbjct: 393 PNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDL 452
Query: 330 TEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM----------PENGVAPDTS 379
++M G PD + L+ L ++++A+ +++V P NGV PD
Sbjct: 453 LQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQ 512
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLD 439
T+N +I+ + G +A + EEM P+ T+ ++ K + DE +Q+ D
Sbjct: 513 TYNILISGLINEGKFLEAEELYEEMPH-RGIVPDTITYSSMIDGLCKQSRLDEA-TQMFD 570
Query: 440 DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
M +K S ++ T+T +I+G C+A + + LF EM
Sbjct: 571 SMGSK-SFSPNVVTFTTLINGYCKAGRVDDGLELFCEM 607
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 156/324 (48%), Gaps = 13/324 (4%)
Query: 202 NTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTI 260
N + ++D+LCK+G+ A+++F E++ I P+ T+N I G+C R +A+ +
Sbjct: 254 NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLL 313
Query: 261 QEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKS 320
QEM P V++Y+ +I ++ ++ F + EL DEM +G PN +TY++++ K
Sbjct: 314 QEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQ 373
Query: 321 GDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTST 380
+ A + M G P+ FN LI A R+ + + + EM E G+ DT+T
Sbjct: 374 NRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLH-EMTETGLVADTTT 432
Query: 381 FNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL--- 437
+NT+I F G A +L+EM C P++ T LL GK + L
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGLC-PDIVTCDTLLDGLCDNGKLKDALEMFKVM 491
Query: 438 ------LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRL 491
LD + + D+ TY ++I GL K A L++EM I P T
Sbjct: 492 QKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSS 551
Query: 492 ILDEV-KQKHMYDAAEKIEAVMKK 514
++D + KQ + +A + +++ K
Sbjct: 552 MIDGLCKQSRLDEATQMFDSMGSK 575
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 182/412 (44%), Gaps = 40/412 (9%)
Query: 140 MVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
++ ++ ++ + D + +L ++M + I + + +++ F + A+ TF ++ G
Sbjct: 85 LMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLG 144
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQ 257
L + T LL LC E +V A F ++ ++ PN TF ++G C+ R+ EA
Sbjct: 145 LHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAV 204
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ-AQGCPPNVVTYTTVMSY 316
+ M G P I+Y TI+ C++ + LL +M+ PNVV Y+ ++
Sbjct: 205 ALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDS 264
Query: 317 LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
L K G +A + +M+ G PD +N +I + R +A + Q EM E ++P
Sbjct: 265 LCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQ-EMLERKISP 323
Query: 377 DTSTFNTMITMFSHHGHHEKAFHVLEEM----------------------NKL---EH-- 409
D T+N +I F G +A + +EM N+L EH
Sbjct: 324 DVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMF 383
Query: 410 -------CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC 462
C PN+ TF+ L+ + D+ + +LL +M + L D TTY +IHG
Sbjct: 384 YLMATKGCSPNLITFNTLIDGYCGAKRIDDGM-ELLHEM-TETGLVADTTTYNTLIHGFY 441
Query: 463 RANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
A L +EMI + P TC +LD + A ++ VM+K
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQK 493
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 175/385 (45%), Gaps = 19/385 (4%)
Query: 38 SSPIESYCSDGARLDHHQVL--CVDSPRLPDIDVIISKVHVGSSEDEVFQS--LKQDHVC 93
+S I +CS G D Q+L ++ PD+ + ++ E + F++ L + +
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353
Query: 94 NAIQPSHYLVNKLIHRF-KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQ 152
I P+ + +I F K + A + + G + + ++D +++D
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDD 413
Query: 153 MRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLD 211
LL EM++ G + T ++ F G A+ E+ + GL + T + LLD
Sbjct: 414 GMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLD 473
Query: 212 TLCKEGKVELARSVFLELK------------SCIPPNAHTFNIFIHGWCKINRVDEAQWT 259
LC GK++ A +F ++ + + P+ T+NI I G + EA+
Sbjct: 474 GLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEEL 533
Query: 260 IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK 319
+EM G P I+YS++I C+Q + ++ D M ++ PNVVT+TT+++ K
Sbjct: 534 YEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCK 593
Query: 320 SGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTS 379
+G ++ + + +M G ++ + LI + + A+ ++Q EM +GV PDT
Sbjct: 594 AGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQ-EMISSGVYPDTI 652
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEM 404
T M+T ++A +LE++
Sbjct: 653 TIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 146/316 (46%), Gaps = 46/316 (14%)
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
+ ++FNI I +C +++ A T ++ G HP V++++T++ C + S+ +
Sbjct: 113 DIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFF 172
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK---------------- 339
+M C PNVVT+TT+M+ L + G EA+ + ++M G +
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232
Query: 340 --------------------PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTS 379
P+ ++ +I +L + R +A ++ EM E G+ PD
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLF-TEMQEKGIFPDLF 291
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLD 439
T+N+MI F G A +L+EM + P+V T++ L+ + K GK E +L D
Sbjct: 292 TYNSMIVGFCSSGRWSDAEQLLQEMLE-RKISPDVVTYNALINAFVKEGKFFEA-EELYD 349
Query: 440 DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQK 499
+M+ + + + TY+ +I G C+ N+ + A +F M +P T ++D
Sbjct: 350 EMLPRGIIP-NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDG---- 404
Query: 500 HMYDAAEKIEAVMKKL 515
Y A++I+ M+ L
Sbjct: 405 --YCGAKRIDDGMELL 418
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 116/247 (46%), Gaps = 16/247 (6%)
Query: 104 NKLIHRFK--DDWKSALGIFR---WAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLE 158
N LIH F D +AL + + +G CP + + + D GK++ +M +++
Sbjct: 434 NTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDN-GKLKDALEMFKVMQ 492
Query: 159 EMSK---------GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLL 209
+ K G + T ++ G++ +A ++E+ G+ +T T + +
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552
Query: 210 LDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGC 268
+D LCK+ +++ A +F + S PN TF I+G+CK RVD+ EM G
Sbjct: 553 IDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGI 612
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
I+Y T+I + + N + ++ EM + G P+ +T +++ L + + A+
Sbjct: 613 VANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVA 672
Query: 329 ITEKMKI 335
+ EK+++
Sbjct: 673 MLEKLQM 679
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 183/398 (45%), Gaps = 17/398 (4%)
Query: 94 NAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMD 151
+ +QP+ ++ K D SAL + R + IY ++D L K +
Sbjct: 213 DGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHS 272
Query: 152 QMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLL 210
+ L EM KG L T ++ F +G+W DA + E+ + + T N L+
Sbjct: 273 DAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALI 332
Query: 211 DTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCH 269
+ KEGK A ++ E L I PN T++ I G+CK NR+D A+ M GC
Sbjct: 333 NAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCS 392
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI 329
P +I+++T+I YC ELL EM G + TY T++ GD A+ +
Sbjct: 393 PNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDL 452
Query: 330 TEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM----------PENGVAPDTS 379
++M G PD + L+ L ++++A+ +++V P NGV PD
Sbjct: 453 LQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQ 512
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLD 439
T+N +I+ + G +A + EEM P+ T+ ++ K + DE +Q+ D
Sbjct: 513 TYNILISGLINEGKFLEAEELYEEMPH-RGIVPDTITYSSMIDGLCKQSRLDEA-TQMFD 570
Query: 440 DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
M +K S ++ T+T +I+G C+A + + LF EM
Sbjct: 571 SMGSK-SFSPNVVTFTTLINGYCKAGRVDDGLELFCEM 607
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 185/412 (44%), Gaps = 40/412 (9%)
Query: 140 MVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
++ ++ ++ + D + +L ++M + I + + +++ F + A+ TF +L G
Sbjct: 85 LMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLG 144
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQ 257
L + T N LL LC E +V A ++F ++ ++ PN TF ++G C+ R+ EA
Sbjct: 145 LHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAV 204
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM-QAQGCPPNVVTYTTVMSY 316
+ M G P I+Y TI+ C++ + LL +M + PNVV Y+ ++
Sbjct: 205 ALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDS 264
Query: 317 LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
L K G +A + +M+ G PD +N +I + R +A + Q EM E ++P
Sbjct: 265 LCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQ-EMLERKISP 323
Query: 377 DTSTFNTMITMFSHHGHHEKAFHVLEEM----------------------NKL---EH-- 409
D T+N +I F G +A + +EM N+L EH
Sbjct: 324 DVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMF 383
Query: 410 -------CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC 462
C PN+ TF+ L+ + D+ + +LL +M + L D TTY +IHG
Sbjct: 384 YLMATKGCSPNLITFNTLIDGYCGAKRIDDGM-ELLHEM-TETGLVADTTTYNTLIHGFY 441
Query: 463 RANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
A L +EMI + P TC +LD + A ++ VM+K
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQK 493
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 112/439 (25%), Positives = 201/439 (45%), Gaps = 26/439 (5%)
Query: 95 AIQPSHYLVNKLIHRF--KDDWKSALGIFR--WAGSCPGYEHSSEIYEMMVDILGKVRQM 150
+ P N L+H +D AL +F + +C + + +++ L + ++
Sbjct: 144 GLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTC---RPNVVTFTTLMNGLCREGRI 200
Query: 151 DQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETM 206
+ ALL+ M + + +T TI M + + +R +E+ + N
Sbjct: 201 VEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSH--IIPNVVIY 258
Query: 207 NLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKG 265
+ ++D+LCK+G+ A+++F E++ I P+ T+N I G+C R +A+ +QEM
Sbjct: 259 SAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLE 318
Query: 266 HGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEE 325
P V++Y+ +I ++ ++ F + EL DEM +G PN +TY++++ K +
Sbjct: 319 RKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDA 378
Query: 326 AIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMI 385
A + M G P+ FN LI A R+ + + + EM E G+ DT+T+NT+I
Sbjct: 379 AEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLH-EMTETGLVADTTTYNTLI 437
Query: 386 TMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL-------- 437
F G A +L+EM C P++ T LL GK + L
Sbjct: 438 HGFYLVGDLNAALDLLQEMISSGLC-PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496
Query: 438 -LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV 496
LD + + D+ TY ++I GL K A L++EM I P T ++D +
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556
Query: 497 -KQKHMYDAAEKIEAVMKK 514
KQ + +A + +++ K
Sbjct: 557 CKQSRLDEATQMFDSMGSK 575
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 175/385 (45%), Gaps = 19/385 (4%)
Query: 38 SSPIESYCSDGARLDHHQVL--CVDSPRLPDIDVIISKVHVGSSEDEVFQS--LKQDHVC 93
+S I +CS G D Q+L ++ PD+ + ++ E + F++ L + +
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353
Query: 94 NAIQPSHYLVNKLIHRF-KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQ 152
I P+ + +I F K + A + + G + + ++D +++D
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDD 413
Query: 153 MRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLD 211
LL EM++ G + T ++ F G A+ E+ + GL + T + LLD
Sbjct: 414 GMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLD 473
Query: 212 TLCKEGKVELARSVFLELK------------SCIPPNAHTFNIFIHGWCKINRVDEAQWT 259
LC GK++ A +F ++ + + P+ T+NI I G + EA+
Sbjct: 474 GLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEEL 533
Query: 260 IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK 319
+EM G P I+YS++I C+Q + ++ D M ++ PNVVT+TT+++ K
Sbjct: 534 YEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCK 593
Query: 320 SGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTS 379
+G ++ + + +M G ++ + LI + + A+ ++Q EM +GV PDT
Sbjct: 594 AGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQ-EMISSGVYPDTI 652
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEM 404
T M+T ++A +LE++
Sbjct: 653 TIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 145/316 (45%), Gaps = 46/316 (14%)
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
+ ++F I I +C +++ A T ++ G HP V++++T++ C + S+ L
Sbjct: 113 DIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLF 172
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK---------------- 339
+M C PNVVT+TT+M+ L + G EA+ + ++M G +
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232
Query: 340 --------------------PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTS 379
P+ ++ +I +L + R +A ++ EM E G+ PD
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLF-TEMQEKGIFPDLF 291
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLD 439
T+N+MI F G A +L+EM + P+V T++ L+ + K GK E +L D
Sbjct: 292 TYNSMIVGFCSSGRWSDAEQLLQEMLE-RKISPDVVTYNALINAFVKEGKFFEA-EELYD 349
Query: 440 DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQK 499
+M+ + + + TY+ +I G C+ N+ + A +F M +P T ++D
Sbjct: 350 EMLPRGIIP-NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDG---- 404
Query: 500 HMYDAAEKIEAVMKKL 515
Y A++I+ M+ L
Sbjct: 405 --YCGAKRIDDGMELL 418
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 116/247 (46%), Gaps = 16/247 (6%)
Query: 104 NKLIHRFK--DDWKSALGIFR---WAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLE 158
N LIH F D +AL + + +G CP + + + D GK++ +M +++
Sbjct: 434 NTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDN-GKLKDALEMFKVMQ 492
Query: 159 EMSK---------GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLL 209
+ K G + T ++ G++ +A ++E+ G+ +T T + +
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552
Query: 210 LDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGC 268
+D LCK+ +++ A +F + S PN TF I+G+CK RVD+ EM G
Sbjct: 553 IDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGI 612
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
I+Y T+I + + N + ++ EM + G P+ +T +++ L + + A+
Sbjct: 613 VANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVA 672
Query: 329 ITEKMKI 335
+ EK+++
Sbjct: 673 MLEKLQM 679
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/304 (20%), Positives = 123/304 (40%), Gaps = 37/304 (12%)
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G+ +I +++A +M P V+ + ++ R V L +M+ +
Sbjct: 53 GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
++ ++T ++ A+ K+ +G PD FN L++ L RV EA+ ++
Sbjct: 113 DIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLF 172
Query: 366 Q---------------------------VE-------MPENGVAPDTSTFNTMITMFSHH 391
VE M E+G+ P T+ T++
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232
Query: 392 GHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDI 451
G A ++L +M ++ H PNV + ++ S K G+ + L +M K D+
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDA-QNLFTEMQEKGIFP-DL 290
Query: 452 TTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE-VKQKHMYDAAEKIEA 510
TY +I G C + + A L +EM+ I+P T +++ VK+ ++A E +
Sbjct: 291 FTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDE 350
Query: 511 VMKK 514
++ +
Sbjct: 351 MLPR 354
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 188/377 (49%), Gaps = 12/377 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ L K + MD+ +L M K G + T ++ + +GQ ++A+ ++
Sbjct: 234 YNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMR 293
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
+ G+E + T +LL+D LCK G+ AR +F + K + P T+ + G+ +
Sbjct: 294 SDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALV 353
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
E + M +G HP +S +I +Y +Q + + +M+ QG PN VTY V+
Sbjct: 354 EMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVI 413
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL---GRASRVQEAVYVYQVEMPE 371
L KSG E+A+ E+M G P + +N LI+ L + R +E + +EM +
Sbjct: 414 GILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELI----LEMLD 469
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
G+ +T FN++I G ++ + E M ++ KPNV T++ L+ GK D
Sbjct: 470 RGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRI-GVKPNVITYNTLINGYCLAGKMD 528
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRL 491
E + +LL MV+ L + TY+ +I+G C+ ++ E A +LFKEM ++P T +
Sbjct: 529 EAM-KLLSGMVSVG-LKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNI 586
Query: 492 ILDEVKQKHMYDAAEKI 508
IL + Q AA+++
Sbjct: 587 ILQGLFQTRRTAAAKEL 603
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 112/470 (23%), Positives = 223/470 (47%), Gaps = 15/470 (3%)
Query: 46 SDGARLDHHQVLCVDSPRLPDI---DVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYL 102
SD A +H++L D LPD+ + II+ + + D+ + L V N + P
Sbjct: 212 SDKAYSTYHEML--DRGILPDVVTYNSIIAALCKAQAMDKAMEVLNT-MVKNGVMPDCMT 268
Query: 103 VNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM 160
N ++H + K A+G + S G E Y +++D L K + + R + + M
Sbjct: 269 YNSILHGYCSSGQPKEAIGFLKKMRS-DGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSM 327
Query: 161 SK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV 219
+K G + T +++ ++ G + D + G+ + ++L+ K+GKV
Sbjct: 328 TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKV 387
Query: 220 ELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTI 278
+ A VF +++ + PNA T+ I CK RV++A ++M G P I Y+++
Sbjct: 388 DQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSL 447
Query: 279 IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
I C + + EL+ EM +G N + + +++ K G E+ ++ E M +G
Sbjct: 448 IHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGV 507
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
KP+ +N LI A ++ EA+ + M G+ P+T T++T+I + E A
Sbjct: 508 KPNVITYNTLINGYCLAGKMDEAMKLLS-GMVSVGLKPNTVTYSTLINGYCKISRMEDAL 566
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
+ +EM P++ T++ +L+ F+T +T ++ L + + ++++TY +++
Sbjct: 567 VLFKEMES-SGVSPDIITYNIILQGLFQTRRT--AAAKELYVRITESGTQIELSTYNIIL 623
Query: 459 HGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
HGLC+ + A +F+ + D+ +T +++D + + D A+ +
Sbjct: 624 HGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDL 673
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 161/338 (47%), Gaps = 15/338 (4%)
Query: 155 ALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDA----VRTFDELGTFGLEKNTETMNLLL 210
AL + KG V +++ + DA +R ELG N + N+LL
Sbjct: 109 ALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCI---PNVFSYNILL 165
Query: 211 DTLCKEGK----VELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
LC E + +EL + + PP+ ++ I+G+ K D+A T EM
Sbjct: 166 KGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDR 225
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
G P V++Y++II + C+ K E+L+ M G P+ +TY +++ SG +EA
Sbjct: 226 GILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEA 285
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
I +KM+ G +PD ++ L+ L + R EA ++ M + G+ P+ +T+ T++
Sbjct: 286 IGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFD-SMTKRGLKPEITTYGTLLQ 344
Query: 387 MFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHH 446
++ G + +L+ M + P+ F L+ + K GK D+ + L+ + +
Sbjct: 345 GYATKGALVEMHGLLDLMVR-NGIHPDHYVFSILICAYAKQGKVDQAM--LVFSKMRQQG 401
Query: 447 LSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
L+ + TY VI LC++ + E A L F++MI ++P
Sbjct: 402 LNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSP 439
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 136/278 (48%), Gaps = 11/278 (3%)
Query: 209 LLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG 267
+++ KEG + A S + E L I P+ T+N I CK +D+A + M +G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG 261
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
P ++Y++I+ YC + L +M++ G P+VVTY+ +M YL K+G EA
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEAR 321
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITM 387
+I + M G KP+ + L+ + E + + M NG+ PD F+ +I
Sbjct: 322 KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDL-MVRNGIHPDHYVFSILICA 380
Query: 388 FSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL---SQLLDDMVNK 444
++ G ++A V +M + + PN T+ ++ K+G+ ++ + Q++D+ ++
Sbjct: 381 YAKQGKVDQAMLVFSKMRQ-QGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSP 439
Query: 445 HHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
++ Y +IHGLC NK E A L EM+ I
Sbjct: 440 GNI-----VYNSLIHGLCTCNKWERAEELILEMLDRGI 472
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 169/368 (45%), Gaps = 18/368 (4%)
Query: 156 LLEEMSKGHIVTLN-TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTE---TMNLLLD 211
LL I LN +A V R A AV ++ + G ++ T T +L+
Sbjct: 41 LLRRGRGASIYGLNRALADVARDSPAA-----AVSRYNRMARAGADEVTPDLCTYGILIG 95
Query: 212 TLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEA-QWTIQEMKGHGCH 269
C+ G+++L + +K +A F + G C R +A ++ M GC
Sbjct: 96 CCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCI 155
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEM---QAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
P V SY+ +++ C + + ELL M + G PP+VV+YTTV++ K GD ++A
Sbjct: 156 PNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKA 215
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
+M G PD +N +I L +A + +A+ V M +NGV PD T+N+++
Sbjct: 216 YSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNT-MVKNGVMPDCMTYNSILH 274
Query: 387 MFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHH 446
+ G ++A L++M + + +P+V T+ L+ K G+ E ++ D M K
Sbjct: 275 GYCSSGQPKEAIGFLKKM-RSDGVEPDVVTYSLLMDYLCKNGRCMEA-RKIFDSMT-KRG 331
Query: 447 LSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAE 506
L +ITTY ++ G + L M+ + I P + +++ ++ D A
Sbjct: 332 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAM 391
Query: 507 KIEAVMKK 514
+ + M++
Sbjct: 392 LVFSKMRQ 399
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 110/260 (42%), Gaps = 4/260 (1%)
Query: 149 QMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN 207
+MD+ LL M S G T + ++ + + EDA+ F E+ + G+ + T N
Sbjct: 526 KMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYN 585
Query: 208 LLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
++L L + + A+ +++ + +S T+NI +HG CK D+A Q +
Sbjct: 586 IILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLM 645
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
+++ +I + + + +L + G PN TY + + G EE
Sbjct: 646 DLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEEL 705
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
++ M+ G DS N ++ L + + A Y + E + + ST + I
Sbjct: 706 DQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA-GTYLSMIDEKHFSLEASTASLFID 764
Query: 387 MFSHHGHHEKAFHVLEEMNK 406
+ S G +++ + L E K
Sbjct: 765 LLS-GGKYQEYYRFLPEKYK 783
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 18/208 (8%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKG---HIVTLNTIAKVM---RRFSGA 181
G + ++ Y +++ K+ +M+ L +EM S G I+T N I + + RR + A
Sbjct: 541 GLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAA 600
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCI---PPNAH 238
+ + + G + T N++L LCK + A +F L C+ A
Sbjct: 601 KEL------YVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNL--CLMDLKLEAR 652
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
TFNI I K+ R DEA+ +G P +Y + ++ Q ++ +L M
Sbjct: 653 TFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSM 712
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
+ GC + ++ L + G+ A
Sbjct: 713 EDNGCTVDSGMLNFIVRELLQRGEITRA 740
>gi|357140400|ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Brachypodium distachyon]
Length = 673
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 105/409 (25%), Positives = 194/409 (47%), Gaps = 40/409 (9%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
+Y+ ++ L +++ LL+EM G +NT ++ G+ +A R D +
Sbjct: 209 LYQTVIHALCAQGGVNEAATLLDEMFLMGCSADVNTFNDIVHGLCTLGRLREAARLVDRM 268
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVF---------------------------- 226
G N T LL LC +VE AR++
Sbjct: 269 MIRGCVPNAITYGFLLKGLCLASQVEEARTMLGRVPELNVVLFNTVIGRCLLDGKLKEAA 328
Query: 227 -----LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQS 281
+ K C PP+AHT++I IHG CK+ R+ A ++EM+ G P +++Y+ ++ S
Sbjct: 329 ELYETMGSKGC-PPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHS 387
Query: 282 YCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPD 341
+CR + + +L+ M +G N+ Y ++ + K ++A+R ++MK G KPD
Sbjct: 388 FCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPD 447
Query: 342 SRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVL 401
+N +IY L ++++EA Y+++ + E GV + T+NT+I +G + A +
Sbjct: 448 ICTYNTIIYHLCNNNQMEEAEYLFENLLHE-GVVANAITYNTLIHALLRNGSWQDAISLA 506
Query: 402 EEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGL 461
+M L C ++ +++ L+K+ + G D + LL +M K + + +Y L+I L
Sbjct: 507 NDM-VLHGCSLDIVSYNGLIKALCRDGNVDRSI-MLLSEMAEK-GIKPNNVSYNLLISEL 563
Query: 462 CRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIE 509
C+ + A L KEM+ ++TP T +++ + K M+ A +E
Sbjct: 564 CKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALNLLE 612
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 108/449 (24%), Positives = 196/449 (43%), Gaps = 42/449 (9%)
Query: 95 AIQPSHYLVNKLIHRFK--DDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQ 152
A+ PS N ++ F D L ++R ++ + + L ++ + D+
Sbjct: 131 AVSPSFRSYNTVLAAFARADCHTDVLSLYRRMVHRDRVPPTTFTFSIAARALCRLGRADE 190
Query: 153 MRALLEEMSKGHIVTLNTIAK-VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLD 211
+L M++ V + + V+ G +A DE+ G + T N ++
Sbjct: 191 ALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSADVNTFNDIVH 250
Query: 212 TLCKEGKV-ELARSV-FLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTI--------- 260
LC G++ E AR V + ++ C+ PNA T+ + G C ++V+EA+ +
Sbjct: 251 GLCTLGRLREAARLVDRMMIRGCV-PNAITYGFLLKGLCLASQVEEARTMLGRVPELNVV 309
Query: 261 ----------------------QEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
+ M GC P +YS +I C+ +LL EM
Sbjct: 310 LFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKLLREM 369
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRV 358
+ +G P++VTYT ++ ++G ++ + E M G + +N +I + + R+
Sbjct: 370 EDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRM 429
Query: 359 QEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFH 418
+A+ Q EM G PD T+NT+I ++ E+A ++ E + E N T++
Sbjct: 430 DDAMRFMQ-EMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLH-EGVVANAITYN 487
Query: 419 PLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
L+ + + G + +S L +DMV H SLDI +Y +I LCR + + +L EM
Sbjct: 488 TLIHALLRNGSWQDAIS-LANDMV-LHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMA 545
Query: 479 GHDITPRYQTCRLILDEV-KQKHMYDAAE 506
I P + L++ E+ K + + DA E
Sbjct: 546 EKGIKPNNVSYNLLISELCKTRRVRDALE 574
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/399 (23%), Positives = 176/399 (44%), Gaps = 43/399 (10%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGT 196
Y ++ L Q+++ R +L + + ++V NT V+ R G+ ++A ++ +G+
Sbjct: 280 YGFLLKGLCLASQVEEARTMLGRVPELNVVLFNT---VIGRCLLDGKLKEAAELYETMGS 336
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWC------- 248
G + T ++L+ LCK G++ A + E++ P+ T+ I +H +C
Sbjct: 337 KGCPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDN 396
Query: 249 ----------------------------KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQ 280
K R+D+A +QEMK G P + +Y+TII
Sbjct: 397 IRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIY 456
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
C + L + + +G N +TY T++ L ++G +++AI + M + G
Sbjct: 457 HLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSL 516
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
D +N LI L R V ++ + EM E G+ P+ ++N +I+ A +
Sbjct: 517 DIVSYNGLIKALCRDGNVDRSIMLLS-EMAEKGIKPNNVSYNLLISELCKTRRVRDALEL 575
Query: 401 LEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHG 460
+EM E P++ T++ L+ K G L+ L + ++ + DI TY ++I
Sbjct: 576 SKEMLNQE-LTPDIVTYNTLINGLCKMGWMHAALNLL--EKLHNEDVHADIITYNILISW 632
Query: 461 LCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQK 499
C+A A +L + ITP +T +++ +K
Sbjct: 633 HCKARLLHDASMLLNRAVTSGITPNERTWGIMVQNFVRK 671
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 117/263 (44%), Gaps = 5/263 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G + E Y M+ + K R+MD ++EM S+G+ + T ++ Q E+A
Sbjct: 408 GLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEA 467
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIH 245
F+ L G+ N T N L+ L + G + A S+ + L C + ++N I
Sbjct: 468 EYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGC-SLDIVSYNGLIK 526
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
C+ VD + + EM G P +SY+ +I C+ EL EM Q P
Sbjct: 527 ALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTP 586
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
++VTY T+++ L K G A+ + EK+ D +N LI +A + +A +
Sbjct: 587 DIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHADIITYNILISWHCKARLLHDASMLL 646
Query: 366 QVEMPENGVAPDTSTFNTMITMF 388
+ +G+ P+ T+ M+ F
Sbjct: 647 NRAV-TSGITPNERTWGIMVQNF 668
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 107/233 (45%), Gaps = 8/233 (3%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLE----EMSKGHIVTLNTIAKVMRRFSGAGQW 184
GY+ Y ++ L QM++ L E E + +T NT+ + R G W
Sbjct: 443 GYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLR---NGSW 499
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIF 243
+DA+ +++ G + + N L+ LC++G V+ + + E+ + I PN ++N+
Sbjct: 500 QDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLL 559
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
I CK RV +A +EM P +++Y+T+I C+ LL+++ +
Sbjct: 560 ISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDV 619
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRAS 356
+++TY ++S+ K+ +A + + G P+ R + ++ R S
Sbjct: 620 HADIITYNILISWHCKARLLHDASMLLNRAVTSGITPNERTWGIMVQNFVRKS 672
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 66/164 (40%), Gaps = 13/164 (7%)
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSR---FFNCLIYTLGRASRVQEAVYVYQVEMPEN-G 373
A + D E A+ + E S P SR L+ L R+ A+++ ++P
Sbjct: 79 AANADPERALFLLE------SLPPSRVPPLRESLLIPLFRSLAPGRALHLLD-QLPHRFA 131
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
V+P ++NT++ F+ H + M + P TF ++ + G+ DE
Sbjct: 132 VSPSFRSYNTVLAAFARADCHTDVLSLYRRMVHRDRVPPTTFTFSIAARALCRLGRADEA 191
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
L+ L + +H D Y VIH LC A L EM
Sbjct: 192 LTMLRS--MARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEM 233
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 117/420 (27%), Positives = 192/420 (45%), Gaps = 50/420 (11%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++VD K ++ + + + E M S G T ++ F G E+A+R DE+
Sbjct: 314 YTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMI 373
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVD 254
T GL+ N T N ++ + K G++ A S+F E L + + P+ T+N+ I G+ K + +
Sbjct: 374 TRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMA 433
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
+A + EMK P +YS +I C + K E+LD+M G PNV Y T++
Sbjct: 434 KACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLI 493
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
+ +E AI + + M G PD +NCLI L RA +V+EA + V+M E G+
Sbjct: 494 KAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLL-VDMGEKGI 552
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEM-------NKL-------EHCK--------- 411
P+ T+ I ++S G + A ++M N + HC
Sbjct: 553 KPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALS 612
Query: 412 -----------PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHG 460
P+++ + ++ S K GKT E + L + K + D+ Y +I G
Sbjct: 613 TFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFL--KTGVVPDVFLYNSLISG 670
Query: 461 LCRANKCEWAYLLFKEMIGHDITPR---YQT-----CRLILDEV-KQKHMYDAAEKIEAV 511
C+ E A L+ EM+ + I P Y T C+ L EV K + ++D E+ + V
Sbjct: 671 FCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCK--LGEVTKARELFDEIEEKDLV 728
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 170/367 (46%), Gaps = 7/367 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDA 187
G E + Y +++D K M + LL EM + + T + ++ + + A
Sbjct: 411 GLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKA 470
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHG 246
D++ G++ N L+ +E + E+A + + + + + P+ +N I G
Sbjct: 471 NEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIG 530
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C+ +V+EA+ + +M G P +Y I Y + +M + G PN
Sbjct: 531 LCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPN 590
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
V YT ++ G+ EA+ + M G PD R ++ +I++L + + +EA+ V+
Sbjct: 591 NVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVF- 649
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
++ + GV PD +N++I+ F G EKA + +EM PN+ ++ L+ K
Sbjct: 650 LKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLH-NGINPNIVVYNTLINGLCK 708
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR- 485
G+ + ++ L D + + L D+ TY+ +I G C++ A+ LF EMI I+P
Sbjct: 709 LGEVTK--ARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDG 766
Query: 486 YQTCRLI 492
Y C LI
Sbjct: 767 YIYCILI 773
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 104/416 (25%), Positives = 196/416 (47%), Gaps = 12/416 (2%)
Query: 73 KVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIH---RFKDDWKSALGIFRWAGSCPG 129
K +V S E+ L + + N + P + N LI R K ++ + + G
Sbjct: 494 KAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEK--G 551
Query: 130 YEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVM-RRFSGAGQWEDAV 188
+ ++ Y +++ K ++ ++M IV N I ++ + G +A+
Sbjct: 552 IKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEAL 611
Query: 189 RTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGW 247
TF + GL + + ++ +L K GK + A VFL+ LK+ + P+ +N I G+
Sbjct: 612 STFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGF 671
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
CK +++A EM +G +P ++ Y+T+I C+ +K EL DE++ + P+V
Sbjct: 672 CKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDV 731
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
VTY+T++ KSG+ EA ++ ++M G PD + LI G+ +++A+ ++
Sbjct: 732 VTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFH- 790
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKT 427
E + V S FN++I F HG +A + ++M + PN+ T+ L+ + K
Sbjct: 791 EAQQKSVG-SLSAFNSLIDSFCKHGKVIEARELFDDMVD-KKLTPNIVTYTILIDAYGKA 848
Query: 428 GKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
+E QL DM ++ + +T +L++ N+ + LFK+M I
Sbjct: 849 EMMEEA-EQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMIS-LFKDMEARGIA 902
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/419 (23%), Positives = 187/419 (44%), Gaps = 46/419 (10%)
Query: 136 IYEMMV----DILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTF 191
IY +++ D+ V + + +LE KG I + + ++ S G+ ++A+ F
Sbjct: 593 IYTILIKGHCDVGNTVEALSTFKCMLE---KGLIPDIRAYSAIIHSLSKNGKTKEAMGVF 649
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKI 250
+ G+ + N L+ CKEG +E A ++ E L + I PN +N I+G CK+
Sbjct: 650 LKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKL 709
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
V +A+ E++ P V++YSTII YC+ N ++ ++L DEM ++G P+ Y
Sbjct: 710 GEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIY 769
Query: 311 TTVMSYLAKSGDFEEAIRI--TEKMKIVGS------------------------------ 338
++ K G+ E+A+ + + K VGS
Sbjct: 770 CILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDK 829
Query: 339 --KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEK 396
P+ + LI G+A ++EA ++ ++M + P+T T+ +++ ++ G+ K
Sbjct: 830 KLTPNIVTYTILIDAYGKAEMMEEAEQLF-LDMETRNIIPNTLTYTSLLLSYNQIGNRFK 888
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTL 456
+ ++M + + + + + K GK+ E L L +V L D+ +
Sbjct: 889 MISLFKDM-EARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDV--FDA 945
Query: 457 VIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
+I LC+ + L EM +++ +TC +L + D A K+ VM++L
Sbjct: 946 LIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRL 1004
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 122/499 (24%), Positives = 198/499 (39%), Gaps = 103/499 (20%)
Query: 78 SSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGS---CPGYEHSS 134
++ED V + L + VC+ +Q S DD F W+ S P Y HS
Sbjct: 75 NNEDNV-RKLNPEIVCSVLQKSEI----------DDSVRLQNFFYWSSSKMSTPQYLHSY 123
Query: 135 EIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQ-----WEDAVR 189
I + + G + Q D M L + K + L+++ + R F G+ + D R
Sbjct: 124 SILAIRLCNSGLIHQADNMLEKLLQTRKPPLEILDSLVRCYREFGGSNLTVFDIFIDKFR 183
Query: 190 TF---DELGTFGLEKNTETM--------NLLLDTL------------------------- 213
+E + + +E NL+ D L
Sbjct: 184 VLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVY 243
Query: 214 ---------CKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
CK G V + V E++ PN T+N FI G C+ VDEA + M
Sbjct: 244 TYTNVIKAHCKVGDVIKGKMVLSEMEKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMM 303
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
G P +Y+ ++ +C+Q + + + M + G PN TYT ++ K G+ E
Sbjct: 304 EKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIE 363
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFN-- 382
EA+RI ++M G K + +N +I + +A + +A+ ++ EM G+ PDT T+N
Sbjct: 364 EALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFN-EMLMAGLEPDTWTYNLL 422
Query: 383 ---------------------------------TMITMFSHHGHHEKAFHVLEEMNKLEH 409
+I+ H +KA VL++M +
Sbjct: 423 IDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIR-NG 481
Query: 410 CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEW 469
KPNV + L+K+ + + + + +LL M+ L D+ Y +I GLCRA K E
Sbjct: 482 VKPNVFMYGTLIKAYVQESRYEMAI-ELLKIMIANGVLP-DLFCYNCLIIGLCRAKKVEE 539
Query: 470 AYLLFKEMIGHDITPRYQT 488
A +L +M I P T
Sbjct: 540 AKMLLVDMGEKGIKPNAHT 558
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 155/329 (47%), Gaps = 6/329 (1%)
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHT 239
A + E+A ++G G++ N T ++ K G++++A F + L S I PN
Sbjct: 534 AKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVI 593
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+ I I G C + EA T + M G P + +YS II S + + + +
Sbjct: 594 YTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFL 653
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
G P+V Y +++S K GD E+A ++ ++M G P+ +N LI L + V
Sbjct: 654 KTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVT 713
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
+A ++ E+ E + PD T++T+I + G+ +AF + +EM + P+ +
Sbjct: 714 KARELFD-EIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMIS-KGISPDGYIYCI 771
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
L+ C K G ++ LS L + K SL + + +I C+ K A LF +M+
Sbjct: 772 LIDGCGKEGNLEKALS-LFHEAQQKSVGSL--SAFNSLIDSFCKHGKVIEARELFDDMVD 828
Query: 480 HDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+TP T +++D + M + AE++
Sbjct: 829 KKLTPNIVTYTILIDAYGKAEMMEEAEQL 857
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 84/408 (20%), Positives = 184/408 (45%), Gaps = 10/408 (2%)
Query: 33 SHIVSSSPIESYCSDGARLDHHQVL--CVDSPRLPDIDVIISKVHVGSSEDEVFQSLK-- 88
++++ + I+ +C G ++ ++ +PDI + +H S + +++
Sbjct: 590 NNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVF 649
Query: 89 QDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGK 146
+ + P +L N LI F + D + A ++ G + +Y +++ L K
Sbjct: 650 LKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLH-NGINPNIVVYNTLINGLCK 708
Query: 147 VRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTET 205
+ ++ + R L +E+ + +V + T + ++ + +G +A + FDE+ + G+ +
Sbjct: 709 LGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYI 768
Query: 206 MNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKG 265
+L+D KEG +E A S+F E + + FN I +CK +V EA+ +M
Sbjct: 769 YCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVD 828
Query: 266 HGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEE 325
P +++Y+ +I +Y + + +L +M+ + PN +TYT+++ + G+ +
Sbjct: 829 KKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFK 888
Query: 326 AIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMI 385
I + + M+ G D+ + + + + EA+ + + E G+ + F+ +I
Sbjct: 889 MISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVE-GIKLEDDVFDALI 947
Query: 386 TMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
+L EM K E + +T + LL +K+G DE
Sbjct: 948 FHLCKEKQISTVLELLSEMGK-EELSLSSKTCNTLLLGFYKSGNEDEA 994
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 125/278 (44%), Gaps = 5/278 (1%)
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
N F+IFI + + ++EA G P +I + +++ + +++
Sbjct: 171 NLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVY 230
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
M P+V TYT V+ K GD + + +M+ KP+ +N I L +
Sbjct: 231 GSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEME-KECKPNLFTYNAFIGGLCQT 289
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQ 415
V EA+ V ++ M E G+ PD T+ ++ F ++A + E M PN
Sbjct: 290 GAVDEALEVKKL-MMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPS-SGLNPNRF 347
Query: 416 TFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFK 475
T+ L+ K G +E L ++ D+M+ + L L++ TY +I G+ +A + A LF
Sbjct: 348 TYTALIDGFIKEGNIEEAL-RIKDEMITRG-LKLNVVTYNAMIGGIAKAGEMAKAMSLFN 405
Query: 476 EMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
EM+ + P T L++D + H A ++ A MK
Sbjct: 406 EMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMK 443
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/280 (20%), Positives = 117/280 (41%), Gaps = 37/280 (13%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAV 188
G IY +++D GK +++ +L E + + +L+ ++ F G+ +A
Sbjct: 761 GISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEAR 820
Query: 189 RTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGW 247
FD++ L N T +L+D K +E A +FL++++ I PN T+ + +
Sbjct: 821 ELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSY 880
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
+I + ++M+ G I+Y + +YC++
Sbjct: 881 NQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKE---------------------- 918
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
G EA+++ K + G K + F+ LI+ L + ++ + +
Sbjct: 919 -------------GKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLS- 964
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKL 407
EM + ++ + T NT++ F G+ ++A VL M +L
Sbjct: 965 EMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRL 1004
>gi|356523400|ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Glycine max]
Length = 664
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 191/408 (46%), Gaps = 39/408 (9%)
Query: 117 ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVM 175
AL F++ + ++H+ Y +M++ LG+ ++D + +L +M I + ++ V+
Sbjct: 56 ALQHFQYLTNTLAFKHTPLTYHVMIEKLGRNSELDALHYILHQMKIERIPCSQDSFICVL 115
Query: 176 RRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKE--GKVELARSVFLELKS-C 232
+ +G + A++ F + FG + + N LLD L E K + +V+ ++
Sbjct: 116 NSYKNSGLGDRALKMFYRIKEFGCKPTVKIYNHLLDALLGESGNKFHMIGAVYENMRGEG 175
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQS----------- 281
+ PN T+N+ + CK ++D A + EM GC P +SY+T++ +
Sbjct: 176 MEPNVFTYNVLLKALCKNGKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRVEEAR 235
Query: 282 ---------------------YCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKS 320
CR+ +V+ L+DEM G PNVV+Y++V+S+L+
Sbjct: 236 EVARRFGAEGVVSVCNALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDV 295
Query: 321 GDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTST 380
G+ E A+ + KM G +P+ F+ L+ RV E V +++V + E GV P+
Sbjct: 296 GEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLE-GVRPNVVV 354
Query: 381 FNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDD 440
+NT++ G+ +A V M K C+PNV T+ L+ K G + S++ +
Sbjct: 355 YNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDL-QGASEVWNK 413
Query: 441 MVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
MVN + ++ YT ++ LC+ + + AY L M P T
Sbjct: 414 MVN-CGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVT 460
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 170/355 (47%), Gaps = 6/355 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ L V +++ A+L +M +G ++T + +M+ + G+ + V + +
Sbjct: 285 YSSVISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMV 344
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCI-PPNAHTFNIFIHGWCKINRV 253
G+ N N LL+ LC G + A V + K C PN T++ +HG+ K +
Sbjct: 345 LEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDL 404
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
A +M G P V+ Y++++ C+ F + Y L+D M GCPP VVT+ T
Sbjct: 405 QGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTF 464
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
+ L G A+R+ ++M+ G PD+R +N L+ L + ++EA + + E+ E
Sbjct: 465 IKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIR-ELEERK 523
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
V + T+NT++ FS HG E VL M + KP+ T + ++ + K GK
Sbjct: 524 VELNLVTYNTVMYGFSSHGKEEWVLQVLGRM-LVNGVKPDAITVNVVIYAYSKLGKVRTA 582
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ Q LD + L DI +T ++ G+C + E A + +M+ I P T
Sbjct: 583 I-QFLDRITAGKELCPDIIAHTSLLWGICNSLGIEEAIVYLNKMLNKGIFPNIAT 636
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 176/401 (43%), Gaps = 41/401 (10%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHI---VTLNTIAKVM--------- 175
G E + Y +++ L K ++D LL EMSK G + V+ T+ M
Sbjct: 175 GMEPNVFTYNVLLKALCKNGKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRVEEA 234
Query: 176 ----RRFSGAG----------------QWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK 215
RRF G + + DE+ G++ N + + ++ L
Sbjct: 235 REVARRFGAEGVVSVCNALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSD 294
Query: 216 EGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI 273
G+VELA +V ++ + C PN HTF+ + G+ RV E + M G P V+
Sbjct: 295 VGEVELALAVLGKMIRRGC-RPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVV 353
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQG-CPPNVVTYTTVMSYLAKSGDFEEAIRITEK 332
Y+T++ C N ++ ++ M+ C PNV TY+T++ K+GD + A + K
Sbjct: 354 VYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNK 413
Query: 333 MKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
M G +P+ + ++ L + S +A Y M +G P TFNT I G
Sbjct: 414 MVNCGVRPNVVVYTSMVDVLCKNSMFDQA-YRLIDNMATDGCPPTVVTFNTFIKGLCCGG 472
Query: 393 HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
A V+++M + C P+ +T++ LL F + E +L+ ++ + + L++
Sbjct: 473 RVLWAMRVVDQMQRY-GCLPDTRTYNELLDGLFSVNELKEA-CELIREL-EERKVELNLV 529
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
TY V++G K EW + M+ + + P T +++
Sbjct: 530 TYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVVI 570
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 125/276 (45%), Gaps = 15/276 (5%)
Query: 82 EVFQSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEM 139
+V +++D C +P+ + L+H F D + A ++ +C G + +Y
Sbjct: 373 DVCGRMEKDCFC---RPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNC-GVRPNVVVYTS 428
Query: 140 MVDILGKVRQMDQMRALLEEMSKGH----IVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
MVD+L K DQ L++ M+ +VT NT K G+ A+R D++
Sbjct: 429 MVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIK---GLCCGGRVLWAMRVVDQMQ 485
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVD 254
+G +T T N LLD L +++ A + EL+ + N T+N ++G+ + +
Sbjct: 486 RYGCLPDTRTYNELLDGLFSVNELKEACELIRELEERKVELNLVTYNTVMYGFSSHGKEE 545
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA-QGCPPNVVTYTTV 313
+ M +G P I+ + +I +Y + + LD + A + P+++ +T++
Sbjct: 546 WVLQVLGRMLVNGVKPDAITVNVVIYAYSKLGKVRTAIQFLDRITAGKELCPDIIAHTSL 605
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
+ + S EEAI KM G P+ ++ L+
Sbjct: 606 LWGICNSLGIEEAIVYLNKMLNKGIFPNIATWDVLV 641
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 78/174 (44%), Gaps = 7/174 (4%)
Query: 134 SEIYEMMVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDAVRTFD 192
+ Y ++D L V ++ + L+ E+ + + + L T VM FS G+ E ++
Sbjct: 493 TRTYNELLDGLFSVNELKEACELIRELEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLG 552
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS----CIPPNAHTFNIFIHGWC 248
+ G++ + T+N+++ K GKV A + + C AHT + G C
Sbjct: 553 RMLVNGVKPDAITVNVVIYAYSKLGKVRTAIQFLDRITAGKELCPDIIAHTS--LLWGIC 610
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
++EA + +M G P + ++ +++ + ++ +LD++ +G
Sbjct: 611 NSLGIEEAIVYLNKMLNKGIFPNIATWDVLVRGFFKKLGHMGPIRILDDILGKG 664
>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 110/379 (29%), Positives = 174/379 (45%), Gaps = 32/379 (8%)
Query: 136 IYEMMVDILGKVRQ-MDQMRALLEEMSKGHIVT-LNTIAKVMRRFSGAGQWEDAVRTFDE 193
+Y I G R+ + + LL+EM + ++V L T ++ AG + A R
Sbjct: 293 VYTYTALIKGLCRKNVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSL 352
Query: 194 LGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINR 252
+ GL + T +D LCK +VE AR +F L + + N +++ I G+CK+ +
Sbjct: 353 MKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGK 412
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
VDEA ++M C P +++ +I C N + L D+M G P V T+
Sbjct: 413 VDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNI 472
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN 372
++ + K GDF++A + +KM G KP +R +N I A +VQEA + V+M E
Sbjct: 473 LIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDM-MVQMKEE 531
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF------- 425
GV PD T+ ++I + G AF VL+ M + C+P+ TF L+K F
Sbjct: 532 GVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDAD-CEPSHHTFLSLIKQLFDKRYVVE 590
Query: 426 KTGKTD-ECLSQLLD------------DMV-------NKHHLSLDITTYTLVIHGLCRAN 465
K+G+T E +S D D+V KH + D Y +I G+C+
Sbjct: 591 KSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVE 650
Query: 466 KCEWAYLLFKEMIGHDITP 484
A L +M I+P
Sbjct: 651 NLGIALKLLDQMQKEGISP 669
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 120/491 (24%), Positives = 218/491 (44%), Gaps = 57/491 (11%)
Query: 33 SHIVSSSP-----IESYCSDGARLDHHQVLCVDSPRLPDIDVIISKVHVGSSEDEVFQSL 87
S+ +S +P ++SY S +DHH+++ D P+ +I+S +
Sbjct: 88 SYWISQTPNFKHNVDSYASLLTLIDHHKIVS-DVPK-----IIVSMIK------------ 129
Query: 88 KQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKV 147
C P V+ + + D + L + + Y ++ +L +
Sbjct: 130 -----CCYSAPDALFVSDICRKMSKDDITKLSL--------------KCYNELLTLLARF 170
Query: 148 RQMDQMRAL----LEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNT 203
+D+M L LEE I T N + V + G ++A + ++ GL +
Sbjct: 171 GLVDEMNQLYTEMLEEFVSMDIYTFNLMINV---YCKMGFVKEAKQFMCKMIQAGLSPDY 227
Query: 204 ETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
T + C+ V+ A VF E+ + N ++N IHG C+ R+DEA M
Sbjct: 228 FTSTSFILGYCRSKDVDSAFRVFEEMPN---RNEVSYNQLIHGLCEAGRIDEAVSLFVRM 284
Query: 264 KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF 323
K C+P V +Y+ +I+ CR+ N K LLDEM + P+++TY ++++ ++G
Sbjct: 285 KDDCCYPNVYTYTALIKGLCRK-NVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHL 343
Query: 324 EEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNT 383
+ A R+ MK G PD R + C I L +++RV+EA ++ + E GV+ + ++
Sbjct: 344 DSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFD-SLTEEGVSANVIMYSV 402
Query: 384 MITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVN 443
+I + G ++A + E+M ++C PN TF+ L+ G E LS L D MV
Sbjct: 403 LIDGYCKVGKVDEAGCLFEKMLS-KNCSPNAYTFNALIHGLCSAGNLKEALS-LFDQMV- 459
Query: 444 KHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYD 503
K L + T+ ++I + + + A+ ++M+ P +T ++
Sbjct: 460 KMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQ 519
Query: 504 AAEKIEAVMKK 514
AE + MK+
Sbjct: 520 EAEDMMVQMKE 530
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 150/358 (41%), Gaps = 39/358 (10%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
+ ++ L + + +L ++M K G T+ T ++ R G ++DA + ++
Sbjct: 435 FNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMM 494
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVD 254
+ G + T N ++ C GKV+ A + +++K +PP+ T+ I + K+
Sbjct: 495 SSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTY 554
Query: 255 EAQWTIQEMKGHGCHPCVISYSTII-QSYCRQY--------------------------- 286
A ++ M C P ++ ++I Q + ++Y
Sbjct: 555 SAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKM 614
Query: 287 -NFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFF 345
F V EL +EM+ GC P+ Y ++S + K + A+++ ++M+ G P F
Sbjct: 615 MEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVF 674
Query: 346 NCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMN 405
N +I + + EA + + +M +G +P T+I G E+ V +
Sbjct: 675 NAVISCCCKLQKYGEAANIVE-DMICSGHSPQLEHCKTLICGLYEEGETERGNSVFK--- 730
Query: 406 KLEHCKPNVQ--TFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGL 461
KL C N + L+ K G +E SQL ++M K+ + TY+++ L
Sbjct: 731 KLRGCGYNDDEIAWKILIDGMLKQGLVEE-FSQLFEEM-EKNGCNFSPRTYSILTQKL 786
>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 999
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 176/384 (45%), Gaps = 39/384 (10%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++VD K ++ + + + E M S G T ++ F G E+A+R DE+
Sbjct: 314 YTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMI 373
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVD 254
T GL+ N T N ++ + K G++ A S+F E L + I P+ T+N+ I G+ K + +
Sbjct: 374 TRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMA 433
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
+A + EMK P +YS +I C + K E+LD+M G PNV Y T++
Sbjct: 434 KACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLI 493
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
+ +E AI + + M G PD +NCLI L RA +V+EA + V+M E G+
Sbjct: 494 KAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLL-VDMGEKGI 552
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEM-------NKL-------EHCK--------- 411
P+ T+ I ++S G + A ++M N + HC
Sbjct: 553 KPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALS 612
Query: 412 -----------PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHG 460
P+++ + ++ S K GKT E + L + K + D+ Y +I G
Sbjct: 613 TFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFL--KTGVVPDVFLYNSLISG 670
Query: 461 LCRANKCEWAYLLFKEMIGHDITP 484
C+ E A L+ EM+ + I P
Sbjct: 671 FCKEGDIEKASQLYDEMLHNGINP 694
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 122/499 (24%), Positives = 198/499 (39%), Gaps = 103/499 (20%)
Query: 78 SSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGS---CPGYEHSS 134
++ED V + L + VC+ +Q S DD F W+ S P Y HS
Sbjct: 75 NNEDNV-RKLNPEIVCSVLQKSEI----------DDSVRLQNFFHWSSSKMSTPQYLHSY 123
Query: 135 EIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQ-----WEDAVR 189
I + + G + Q D M L + K + L+++ + R F G+ + D R
Sbjct: 124 SILAIRLCNSGLIHQADNMLEKLLQTRKPPLEILDSLVRCYREFGGSNLTVFDIFIDKFR 183
Query: 190 TF---DELGTFGLEKNTETM--------NLLLDTL------------------------- 213
+E + + +E NL+ D L
Sbjct: 184 VLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVY 243
Query: 214 ---------CKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
CK G V + V E++ PN T+N FI G C+ VDEA + M
Sbjct: 244 TYTNVIKAHCKVGDVIKGKMVLSEMEKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMM 303
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
G P +Y+ ++ +C+Q + + + M + G PN TYT ++ K G+ E
Sbjct: 304 EKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIE 363
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFN-- 382
EA+RI ++M G K + +N +I + +A + +A+ ++ EM G+ PDT T+N
Sbjct: 364 EALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFN-EMLMAGIEPDTWTYNLL 422
Query: 383 ---------------------------------TMITMFSHHGHHEKAFHVLEEMNKLEH 409
+I+ H +KA VL++M +
Sbjct: 423 IDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIR-NG 481
Query: 410 CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEW 469
KPNV + L+K+ + + + + +LL M+ L D+ Y +I GLCRA K E
Sbjct: 482 VKPNVFMYGTLIKAYVQESRYEMAI-ELLKIMIANGVLP-DLFCYNCLIIGLCRAKKVEE 539
Query: 470 AYLLFKEMIGHDITPRYQT 488
A +L +M I P T
Sbjct: 540 AKMLLVDMGEKGIKPNAHT 558
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 163/338 (48%), Gaps = 8/338 (2%)
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSC 232
+++ + ++E A+ + G+ + N L+ LC+ KVE A+ + +++ +
Sbjct: 492 LIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKG 551
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
I PNAHT+ FI+ + K + A+ ++M G P + Y+ +I+ +C N +
Sbjct: 552 IKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEAL 611
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
M +G P++ Y+ ++ L+K+G +EA+ + K G PD +N LI
Sbjct: 612 STFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGF 671
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSH--HGHHEKAFHVLEEMNKLEHC 410
+ +++A +Y EM NG+ P+ +NT+I + + G+ +AF + +EM +
Sbjct: 672 CKEGDIEKASQLYD-EMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMIS-KGI 729
Query: 411 KPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWA 470
P+ + L+ C K G ++ LS L + K SL + + +I C+ K A
Sbjct: 730 SPDGYIYCILIDGCGKEGNLEKALS-LFHEAQQKSVGSL--SAFNSLIDSFCKHGKVIEA 786
Query: 471 YLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
LF +M+ +TP T +++D + M + AE++
Sbjct: 787 RELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQL 824
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 106/484 (21%), Positives = 210/484 (43%), Gaps = 47/484 (9%)
Query: 73 KVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIH---RFKDDWKSALGIFRWAGSCPG 129
K +V S E+ L + + N + P + N LI R K ++ + + G
Sbjct: 494 KAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEK--G 551
Query: 130 YEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVM-RRFSGAGQWEDAV 188
+ ++ Y +++ K ++ ++M IV N I ++ + G +A+
Sbjct: 552 IKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEAL 611
Query: 189 RTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGW 247
TF + GL + + ++ +L K GK + A VFL+ LK+ + P+ +N I G+
Sbjct: 612 STFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGF 671
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQ--SYCRQYNFSKVYELLDEMQAQGCPP 305
CK +++A EM +G +P ++ Y+T+I YC+ N ++ ++L DEM ++G P
Sbjct: 672 CKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISP 731
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRI--TEKMKIVGS------------------------- 338
+ Y ++ K G+ E+A+ + + K VGS
Sbjct: 732 DGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFD 791
Query: 339 -------KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHH 391
P+ + LI G+A ++EA ++ ++M + P+T T+ +++ ++
Sbjct: 792 DMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLF-LDMETRNIIPNTLTYTSLLLSYNQI 850
Query: 392 GHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDI 451
G+ K + ++M + + + + + K GK+ E L L +V L D+
Sbjct: 851 GNRFKMISLFKDM-EARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDV 909
Query: 452 TTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAV 511
+ +I LC+ + L EM +++ +TC +L + D A K+ V
Sbjct: 910 --FDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGV 967
Query: 512 MKKL 515
M++L
Sbjct: 968 MQRL 971
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 125/278 (44%), Gaps = 5/278 (1%)
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
N F+IFI + + ++EA G P +I + +++ + +++
Sbjct: 171 NLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVY 230
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
M P+V TYT V+ K GD + + +M+ KP+ +N I L +
Sbjct: 231 GSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEME-KECKPNLFTYNAFIGGLCQT 289
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQ 415
V EA+ V ++ M E G+ PD T+ ++ F ++A + E M PN
Sbjct: 290 GAVDEALEVKKLMM-EKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPS-SGLNPNRF 347
Query: 416 TFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFK 475
T+ L+ K G +E L ++ D+M+ + L L++ TY +I G+ +A + A LF
Sbjct: 348 TYTALIDGFIKEGNIEEAL-RIKDEMITRG-LKLNVVTYNAMIGGIAKAGEMAKAMSLFN 405
Query: 476 EMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
EM+ I P T L++D + H A ++ A MK
Sbjct: 406 EMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMK 443
>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
Length = 353
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 149/273 (54%), Gaps = 7/273 (2%)
Query: 214 CKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPC 271
CK + A + E+ K C P + T+N+ ++G C+ RVD+A ++ + +GC P
Sbjct: 3 CKRSGYKQAMKLLDEMRDKGCTP-DIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPN 61
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
+SY+ +++ C + EL+ EM +GCPPNVVT+ ++S+L + G E A+ + E
Sbjct: 62 TVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLE 121
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHH 391
++ G P+S +N L++ + ++ +A+ + M G PD ++NT++T
Sbjct: 122 QIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDL-MVSRGCYPDIVSYNTLLTALCRS 180
Query: 392 GHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDI 451
G + A +L ++ K + C P + +++ ++ K GKT E L +LL++MV+K L DI
Sbjct: 181 GEVDVAVELLHQL-KDKGCAPVLISYNTVIDGLTKAGKTKEAL-ELLNEMVSK-GLQPDI 237
Query: 452 TTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
TY+ + GLCR ++ E A F ++ I P
Sbjct: 238 ITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRP 270
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 164/335 (48%), Gaps = 8/335 (2%)
Query: 152 QMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLL 210
Q LL+EM KG + T V+ G+ +DA+ L ++G E NT + N++L
Sbjct: 10 QAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVL 69
Query: 211 DTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGC 268
LC + E A + E+ K C PPN TFN+ I C+ V+ A ++++ +GC
Sbjct: 70 KGLCTAERWEDAEELMGEMGQKGC-PPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGC 128
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
P +SY+ ++ ++C+Q K LD M ++GC P++V+Y T+++ L +SG+ + A+
Sbjct: 129 TPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVE 188
Query: 329 ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF 388
+ ++K G P +N +I L +A + +EA+ + EM G+ PD T++T+
Sbjct: 189 LLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLN-EMVSKGLQPDIITYSTIAAGL 247
Query: 389 SHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
E A ++ + +PN ++ ++ K +T + L M+ +
Sbjct: 248 CREDRIEDAIRAFGKVQDM-GIRPNTVLYNAIILGLCKRRETHSAI-DLFAYMIGNGCMP 305
Query: 449 LDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
+ +TYT++I GL + A L E+ +
Sbjct: 306 -NESTYTILIEGLAYEGLIKEARDLLDELCSRGVV 339
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 156/326 (47%), Gaps = 5/326 (1%)
Query: 184 WEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNI 242
++ A++ DE+ G + T N++++ +C+EG+V+ A L S PN ++NI
Sbjct: 8 YKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNI 67
Query: 243 FIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
+ G C R ++A+ + EM GC P V++++ +I CR+ E+L+++ G
Sbjct: 68 VLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYG 127
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
C PN ++Y ++ K ++A+ + M G PD +N L+ L R+ V AV
Sbjct: 128 CTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAV 187
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLK 422
+ ++ + G AP ++NT+I + G ++A +L EM + +P++ T+ +
Sbjct: 188 ELLH-QLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVS-KGLQPDIITYSTIAA 245
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
+ + ++ + V + + Y +I GLC+ + A LF MIG+
Sbjct: 246 GLCREDRIEDAIRAF--GKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGC 303
Query: 483 TPRYQTCRLILDEVKQKHMYDAAEKI 508
P T ++++ + + + A +
Sbjct: 304 MPNESTYTILIEGLAYEGLIKEARDL 329
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 148/283 (52%), Gaps = 13/283 (4%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KG---HIVTLNTIAKVMRRFSGAGQW 184
G E ++ Y +++ L + + L+ EM KG ++VT N + + R G
Sbjct: 57 GCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCR---KGLV 113
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL---KSCIPPNAHTFN 241
E A+ +++ +G N+ + N LL CK+ K++ A + FL+L + C P + ++N
Sbjct: 114 EPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMA-FLDLMVSRGCYP-DIVSYN 171
Query: 242 IFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ 301
+ C+ VD A + ++K GC P +ISY+T+I + + ELL+EM ++
Sbjct: 172 TLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSK 231
Query: 302 GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
G P+++TY+T+ + L + E+AIR K++ +G +P++ +N +I L + A
Sbjct: 232 GLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSA 291
Query: 362 VYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
+ ++ M NG P+ ST+ +I ++ G ++A +L+E+
Sbjct: 292 IDLFAY-MIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDEL 333
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 2/168 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ L + ++D LL ++ KG L + V+ + AG+ ++A+ +E+
Sbjct: 170 YNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMV 229
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVD 254
+ GL+ + T + + LC+E ++E A F +++ I PN +N I G CK
Sbjct: 230 SKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETH 289
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
A M G+GC P +Y+ +I+ + + +LLDE+ ++G
Sbjct: 290 SAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG 337
>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 997
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 174/375 (46%), Gaps = 23/375 (6%)
Query: 158 EEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEG 217
E + +G I +T +KV+ A + E A F+E+ GL + T +++D+ CK G
Sbjct: 473 EMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAG 532
Query: 218 KVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYS 276
+E AR F E++ PN T+ IH + K +V A + M GC P +++YS
Sbjct: 533 LIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYS 592
Query: 277 TIIQSYCRQYNFSKVYELLDEM-QAQGCP---------------PNVVTYTTVMSYLAKS 320
+I +C+ K ++ + M ++ P PNVVTY ++ KS
Sbjct: 593 ALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKS 652
Query: 321 GDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTST 380
EEA ++ + M + G +P+ ++ LI L + ++ EA V + EM E+G T
Sbjct: 653 HRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV-KTEMSEHGFPATLYT 711
Query: 381 FNTMITMFSHHGHHEKAFHVLEEMNKLEH-CKPNVQTFHPLLKSCFKTGKTDECLSQLLD 439
++++I + + A VL +M LE+ C PNV + ++ K GKTDE L
Sbjct: 712 YSSLIDRYFKVKRQDLASKVLSKM--LENSCAPNVVIYTEMIDGLCKVGKTDEAYK--LM 767
Query: 440 DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQK 499
M+ + ++ TYT +I G K E L + M + P Y T R+++D +
Sbjct: 768 QMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKN 827
Query: 500 HMYDAAEKIEAVMKK 514
D A + MK+
Sbjct: 828 GALDVAHNLLEEMKQ 842
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 183/409 (44%), Gaps = 56/409 (13%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL- 194
Y ++ K +++ L E M S+G + + T + ++ AGQ E A + F+ +
Sbjct: 556 YTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMC 615
Query: 195 GTFGL----------EKNTETMNL-----LLDTLCKEGKVELARSVF--LELKSCIPPNA 237
G+ + + N+E N+ LLD CK +VE AR + + ++ C PN
Sbjct: 616 GSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGC-EPNQ 674
Query: 238 HTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDE 297
++ I G CK+ ++DEAQ EM HG + +YS++I Y + ++L +
Sbjct: 675 IVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSK 734
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
M C PNVV YT ++ L K G +EA ++ + M+ G +P+ + +I G +
Sbjct: 735 MLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGK 794
Query: 358 VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTF 417
++ + + + M GVAP+ T+ +I +G + A ++LEEM K H + +
Sbjct: 795 IETCLELLE-RMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM-KQTHWPTHTAGY 852
Query: 418 HPLLKSCFK-----TGKTDE-----------CLSQLLDDMVNKHHLSLDI---------- 451
+++ K G DE L+D+++ L + +
Sbjct: 853 RKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFS 912
Query: 452 -------TTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT-CRLI 492
+TY +I LC ANK E A+ LF EM + P Q+ C LI
Sbjct: 913 ATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLI 961
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 112/477 (23%), Positives = 205/477 (42%), Gaps = 34/477 (7%)
Query: 47 DGARLDHHQVLCVDSPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQP-SHYLVNK 105
D ++ HQV+ + + D I V S D+VF Q + + S LV +
Sbjct: 81 DYGNVNVHQVVPIITQSSIDARAIADAV---SGVDDVFGRKSQKFLRQFREKLSESLVIE 137
Query: 106 LIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQM--RALLEEMSKG 163
++ R + + F WAG GY+H++ +Y +VD++ VR D+ L+++
Sbjct: 138 VL-RLIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLI--VRDDDEKVPEEFLQQIRDD 194
Query: 164 HIVTLNTIAKVM-RRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELA 222
V+ R+ G + A+ L F + T N L+ K +++ A
Sbjct: 195 DKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSA 254
Query: 223 RSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQS 281
+ E+ + + + T F + CK+ + EA T+ E + P + Y+ +I
Sbjct: 255 SLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREA-LTLVETENF--VPDTVFYTKLISG 311
Query: 282 YCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPD 341
C F + + L+ M+A C PNVVTY+T++ R+ M + G P
Sbjct: 312 LCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPS 371
Query: 342 SRFFNCLIYTLGRASRVQEAVYVYQV--EMPENGVAPDTSTFNTMITMFSHHGHH----- 394
+ FN L++ + + Y Y++ +M + G P +N +I
Sbjct: 372 PKIFNSLVHAYCTSG---DHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDL 428
Query: 395 ----EKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLD 450
EKA+ + + + K NV +F L S GK ++ S ++ +M+ + + D
Sbjct: 429 LDLAEKAYSEMLAAGVVLN-KINVSSFTRCLCS---AGKYEKAFS-VIREMIGQGFIP-D 482
Query: 451 ITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEK 507
+TY+ V++ LC A+K E A+LLF+EM + T +++D + + + A K
Sbjct: 483 TSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARK 539
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 151/324 (46%), Gaps = 10/324 (3%)
Query: 124 AGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAG 182
A S G E + +Y+ ++D L KV ++D+ + + EMS+ G TL T + ++ R+
Sbjct: 664 AMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVK 723
Query: 183 QWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTF 240
+ + A + ++ N ++D LCK GK + A + +E K C PN T+
Sbjct: 724 RQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGC-QPNVVTY 782
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
I G+ I +++ ++ M G P ++Y +I C+ + LL+EM+
Sbjct: 783 TAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQ 842
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
P + Y V+ K +F E++ + +++ + P + LI L +A R++
Sbjct: 843 THWPTHTAGYRKVIEGFNK--EFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEM 900
Query: 361 AVYVYQVEMPENGVAPD-TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
A+ + + + D +ST+N++I E AF + EM K + P +Q+F
Sbjct: 901 ALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTK-KGVIPEMQSFCS 959
Query: 420 LLKSCFKTGKTDECLSQLLDDMVN 443
L+K F+ K E L LL D ++
Sbjct: 960 LIKGLFRNSKISEAL--LLLDFIS 981
>gi|255660922|gb|ACU25630.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 484
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 197/389 (50%), Gaps = 14/389 (3%)
Query: 100 HYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEE 159
H LV ++H K+ + AL FRW +EH+ E + +++ILG+ +++ R +L +
Sbjct: 12 HELVYNVLHGAKNA-EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLD 70
Query: 160 M-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
M KG + ++ + AG +++V+ F ++ G+E+ ++ + L + + G+
Sbjct: 71 MPKKGLEWDXDMWVLMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGR 130
Query: 219 VELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
+A+ F + L I P HTFN+ I G+ +V+ A ++MK P VI+Y+T
Sbjct: 131 YMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVITYNT 190
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+I Y R + + EM+ + PNVVTYTT++ ++A+R+ E+MK G
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGKNIEPNVVTYTTLIKGYVSVDQVDDALRLVEEMKGYG 250
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP-DTSTFNTMITMFSHHGHHEK 396
KP++ ++ L+ L A ++ EA + + EM + +AP D S F +I+ G+ +
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMSEARSILK-EMLDKYIAPTDNSIFMRLISSQCKAGNLDA 309
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK-------HHLSL 449
A VL+ M +L + L+++ K G+ D+ + +LLD ++ K L +
Sbjct: 310 AADVLKAMIRLS-VPTEAGHYGVLIENYCKAGQYDQAV-KLLDKLIEKDIILRPQSTLHM 367
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMI 478
+ + Y +I LC + A L ++++
Sbjct: 368 EPSAYNXMIEYLCNNGQXAKAETLVRQLL 396
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 145/331 (43%), Gaps = 5/331 (1%)
Query: 180 GAGQWEDAVRTFDELGTFGL-EKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNA 237
GA E A++ F + L E N ET +++ L + K+ AR + L++ K + +
Sbjct: 21 GAKNAEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDX 80
Query: 238 HTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDE 297
+ + I + K V E+ Q+M+ G + SY + + R+ + ++
Sbjct: 81 DMWVLMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNK 140
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
M ++G P T+ ++ SG E A R E MK PD +N +I R +
Sbjct: 141 MLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVITYNTMINGYYRVKK 200
Query: 358 VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTF 417
++EA Y VEM + P+ T+ T+I + + A ++EEM K KPN T+
Sbjct: 201 MEEAEK-YFVEMKGKNIEPNVVTYTTLIKGYVSVDQVDDALRLVEEM-KGYGIKPNAITY 258
Query: 418 HPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
LL K E S +L +M++K+ D + + +I C+A + A + K M
Sbjct: 259 STLLPGLCNAEKMSEARS-ILKEMLDKYIAPTDNSIFMRLISSQCKAGNLDAAADVLKAM 317
Query: 478 IGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
I + ++++ + YD A K+
Sbjct: 318 IRLSVPTEAGHYGVLIENYCKAGQYDQAVKL 348
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 129/267 (48%), Gaps = 6/267 (2%)
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
+ ++++ A+ + +M G + +I SY + + +L +M+ G +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDXDMWVLMIDSYGKAGIVQESVKLFQKMEELGVERTIK 116
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
+Y + + + G + A R KM G +P FN +I+ + +V+ A ++ +
Sbjct: 117 SYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFE-D 175
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M ++PD T+NTMI + E+A EM K ++ +PNV T+ L+K
Sbjct: 176 MKSREISPDVITYNTMINGYYRVKKMEEAEKYFVEM-KGKNIEPNVVTYTTLIKGYVSVD 234
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ D+ L +L+++M + + + TY+ ++ GLC A K A + KEM+ I P +
Sbjct: 235 QVDDAL-RLVEEM-KGYGIKPNAITYSTLLPGLCNAEKMSEARSILKEMLDKYIAPTDNS 292
Query: 489 C--RLILDEVKQKHMYDAAEKIEAVMK 513
RLI + K ++ AA+ ++A+++
Sbjct: 293 IFMRLISSQCKAGNLDAAADVLKAMIR 319
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 5/205 (2%)
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N T+ ++ L ++ A I M G + D + +I + G+A VQE+V ++
Sbjct: 44 NRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDXDMWVLMIDSYGKAGIVQESVKLF 103
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
Q +M E GV +++ + + G + A +M E +P TF+ ++ F
Sbjct: 104 Q-KMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLS-EGIEPTRHTFNVMIWGFF 161
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
+GK E ++ +DM ++ +S D+ TY +I+G R K E A F EM G +I P
Sbjct: 162 LSGKV-ETANRFFEDMKSRE-ISPDVITYNTMINGYYRVKKMEEAEKYFVEMKGKNIEPN 219
Query: 486 YQT-CRLILDEVKQKHMYDAAEKIE 509
T LI V + DA +E
Sbjct: 220 VVTYTTLIKGYVSVDQVDDALRLVE 244
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 100/239 (41%), Gaps = 20/239 (8%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRFSG---AGQW 184
G + ++ Y ++ L +M + R++L+EM +I T N+I MR S AG
Sbjct: 250 GIKPNAITYSTLLPGLCNAEKMSEARSILKEMLDKYIAPTDNSI--FMRLISSQCKAGNL 307
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELA---------RSVFLELKSCIPP 235
+ A + + +L++ CK G+ + A + + L +S +
Sbjct: 308 DAAADVLKAMIRLSVPTEAGHYGVLIENYCKAGQYDQAVKLLDKLIEKDIILRPQSTLHM 367
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCH-PCVISYSTIIQSYCRQYNFSKVYEL 294
+N I C + +A+ ++++ G P ++ T+I+ + R+ + +EL
Sbjct: 368 EPSAYNXMIEYLCNNGQXAKAETLVRQLLKLGVQDPTALN--TLIRGHSREGSPDSAFEL 425
Query: 295 LDEMQAQGCPPNVVTYTT-VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
L M + Y + V SYL KS + +A + M PDS F ++ +L
Sbjct: 426 LKIMLRRKVDSEKSAYDSLVQSYLKKS-EPXDAKAALDSMIENDHLPDSSLFRSVMESL 483
>gi|449457845|ref|XP_004146658.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Cucumis sativus]
gi|449484609|ref|XP_004156929.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Cucumis sativus]
Length = 501
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 115/439 (26%), Positives = 212/439 (48%), Gaps = 34/439 (7%)
Query: 70 IISKVHVGSSEDEVFQS--LKQDHVCNA---------IQPSHYLVNKLIHRFKDDWKSAL 118
I++K+HV + EV QS L + + + P+H V +LI + D K AL
Sbjct: 5 ILNKIHVLQVQSEVRQSDSLNKRRTMGSKAMFKWAKTVTPTH--VQQLIQA-ERDIKKAL 61
Query: 119 GIFRWAGS--CPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVM 175
IF A + G++H + +M+ L Q LL+ M + I VT + + +
Sbjct: 62 IIFDSATAEYANGFKHDLNTFSLMISKLISANQFRLAETLLDRMKEEKIDVTEDILLSIC 121
Query: 176 RRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIP 234
R + + D++R F ++ F + ++ +L L +E +++ A + ++ K IP
Sbjct: 122 RAYGRIHKPLDSIRVFHKMQDFHCKPTEKSYISVLAILVEENQLKSAFRFYRDMRKMGIP 181
Query: 235 PNAHTFNIFIHGWCK-INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
P + N+ I +CK +D+A + M HGC P +Y T+I CR + + E
Sbjct: 182 PTVTSLNVLIKAFCKNSGTMDKAMHLFRTMSNHGCEPDSYTYGTLINGLCRFRSIVEAKE 241
Query: 294 LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL- 352
LL EM+ +GC P+VVTYT+++ L + + +EA+R+ E MK +P+ ++ L+
Sbjct: 242 LLQEMETKGCSPSVVTYTSIIHGLCQLNNVDEAMRLLEDMKDKNIEPNVFTYSSLMDGFC 301
Query: 353 --GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHC 410
G +SR ++ + + M + + P+ +++T++ + G +A + + M KL+
Sbjct: 302 KTGHSSRARDILEL----MIQKRLRPNMISYSTLLNGLCNEGKINEALEIFDRM-KLQGF 356
Query: 411 KPNVQTFHPLLKSCFKTGKTDECLSQLLDDMV------NKHHLSLDITTYTLVIHGLCRA 464
KP+ + ++ + E + LD+MV N+ SL + T+ VIHGLC
Sbjct: 357 KPDAGLYGKIVNCLCDVSRFQEA-ANFLDEMVLCGIKPNRITWSLHVRTHNRVIHGLCTI 415
Query: 465 NKCEWAYLLFKEMIGHDIT 483
N A+ L+ ++ I+
Sbjct: 416 NNSNRAFQLYLSVLTRGIS 434
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 143/292 (48%), Gaps = 25/292 (8%)
Query: 165 IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARS 224
+ +LN + K + SG + A+ F + G E ++ T L++ LC+ + A+
Sbjct: 184 VTSLNVLIKAFCKNSGT--MDKAMHLFRTMSNHGCEPDSYTYGTLINGLCRFRSIVEAKE 241
Query: 225 VF--LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSY 282
+ +E K C P+ T+ IHG C++N VDEA +++MK P V +YS+++ +
Sbjct: 242 LLQEMETKGC-SPSVVTYTSIIHGLCQLNNVDEAMRLLEDMKDKNIEPNVFTYSSLMDGF 300
Query: 283 CRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDS 342
C+ + S+ ++L+ M + PN+++Y+T+++ L G EA+ I ++MK+ G KPD+
Sbjct: 301 CKTGHSSRARDILELMIQKRLRPNMISYSTLLNGLCNEGKINEALEIFDRMKLQGFKPDA 360
Query: 343 RFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLE 402
+ ++ L SR QEA EM G+ P+ T++ H H + H L
Sbjct: 361 GLYGKIVNCLCDVSRFQEAANFLD-EMVLCGIKPNRITWSL------HVRTHNRVIHGLC 413
Query: 403 EMNKLEHC------------KPNVQTFHPLLKSCFKTGKTDECLSQLLDDMV 442
+N V TF+ LLK CF K S++LD+MV
Sbjct: 414 TINNSNRAFQLYLSVLTRGISITVDTFNSLLK-CFCNKKDLPKTSRILDEMV 464
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 141/336 (41%), Gaps = 37/336 (11%)
Query: 95 AIQPSHYLVNKLIHRF---KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMD 151
I P+ +N LI F A+ +FR S G E S Y +++ L + R +
Sbjct: 179 GIPPTVTSLNVLIKAFCKNSGTMDKAMHLFR-TMSNHGCEPDSYTYGTLINGLCRFRSIV 237
Query: 152 QMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLL 210
+ + LL+EM +KG ++ T ++ ++A+R +++ +E N T + L+
Sbjct: 238 EAKELLQEMETKGCSPSVVTYTSIIHGLCQLNNVDEAMRLLEDMKDKNIEPNVFTYSSLM 297
Query: 211 DTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCH 269
D CK G AR + L ++ + PN +++ ++G C +++EA MK G
Sbjct: 298 DGFCKTGHSSRARDILELMIQKRLRPNMISYSTLLNGLCNEGKINEALEIFDRMKLQGFK 357
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI 329
P Y I+ C F + LDEM G PN +T++ +
Sbjct: 358 PDAGLYGKIVNCLCDVSRFQEAANFLDEMVLCGIKPNRITWSLHV--------------- 402
Query: 330 TEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFS 389
R N +I+ L + A +Y + + G++ TFN+++ F
Sbjct: 403 -------------RTHNRVIHGLCTINNSNRAFQLY-LSVLTRGISITVDTFNSLLKCFC 448
Query: 390 HHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
+ K +L+EM + C P + + ++ +CF
Sbjct: 449 NKKDLPKTSRILDEM-VINGCIPQGEMWSTMV-NCF 482
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 119/254 (46%), Gaps = 17/254 (6%)
Query: 238 HTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLD- 296
+TF++ I N+ A+ + MK + I+ S CR Y ++++ LD
Sbjct: 80 NTFSLMISKLISANQFRLAETLLDRMKEEK----IDVTEDILLSICRAY--GRIHKPLDS 133
Query: 297 -----EMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYT 351
+MQ C P +Y +V++ L + + A R M+ +G P N LI
Sbjct: 134 IRVFHKMQDFHCKPTEKSYISVLAILVEENQLKSAFRFYRDMRKMGIPPTVTSLNVLIKA 193
Query: 352 LGRAS-RVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHC 410
+ S + +A+++++ M +G PD+ T+ T+I +A +L+EM + + C
Sbjct: 194 FCKNSGTMDKAMHLFRT-MSNHGCEPDSYTYGTLINGLCRFRSIVEAKELLQEM-ETKGC 251
Query: 411 KPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWA 470
P+V T+ ++ + DE + +LL+DM +K ++ ++ TY+ ++ G C+ A
Sbjct: 252 SPSVVTYTSIIHGLCQLNNVDEAM-RLLEDMKDK-NIEPNVFTYSSLMDGFCKTGHSSRA 309
Query: 471 YLLFKEMIGHDITP 484
+ + MI + P
Sbjct: 310 RDILELMIQKRLRP 323
>gi|414869157|tpg|DAA47714.1| TPA: hypothetical protein ZEAMMB73_516901 [Zea mays]
Length = 853
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 172/333 (51%), Gaps = 11/333 (3%)
Query: 94 NAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQM 153
+A Q + L KL+H D ALG F+W PG++H Y M+ ILG+ RQ +
Sbjct: 326 DAFQANQVL--KLLH----DHTVALGFFQWLKRQPGFKHDGHTYTTMIGILGQARQFGVL 379
Query: 154 RALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDT 212
+ LL+EMS+ H T+ T +++ + A ++AV+ F+E+ G E + T L+D
Sbjct: 380 KELLDEMSRAHCKPTVVTYNRIIHAYGRANYLKEAVKVFEEMQEAGYEPDRVTYCTLIDI 439
Query: 213 LCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPC 271
K G +++A ++ ++ + P+ T+++ ++ K ++ A EM +GC P
Sbjct: 440 HAKAGYLDIAMDLYGRMQEVGLSPDTFTYSVMVNCLGKGGQLAAAYKLFCEMIENGCTPN 499
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
+++Y+ +I + N+ V +L +MQ G P+ +TY+ VM L G +EA +
Sbjct: 500 LVTYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFI 559
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHH 391
+M+ + PD + L+ G+A V +A+ YQ M ++G+ P+ T N++++ F
Sbjct: 560 EMRRDWA-PDEPVYGLLVDLWGKAGNVDKALGWYQA-MLQDGLQPNVPTCNSLLSAFLKM 617
Query: 392 GHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
+ A+ VL+ M P+VQT+ LL C
Sbjct: 618 NRFQDAYIVLQNM-LARGLVPSVQTYTLLLSCC 649
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 134/287 (46%), Gaps = 6/287 (2%)
Query: 219 VELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTI 278
V L +L+ + + HT+ I + + + + EM C P V++Y+ I
Sbjct: 342 VALGFFQWLKRQPGFKHDGHTYTTMIGILGQARQFGVLKELLDEMSRAHCKPTVVTYNRI 401
Query: 279 IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
I +Y R + ++ +EMQ G P+ VTY T++ AK+G + A+ + +M+ VG
Sbjct: 402 IHAYGRANYLKEAVKVFEEMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRMQEVGL 461
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
PD+ ++ ++ LG+ ++ A Y EM ENG P+ T+N MI + + ++E
Sbjct: 462 SPDTFTYSVMVNCLGKGGQL-AAAYKLFCEMIENGCTPNLVTYNIMIALQAKARNYENVV 520
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
+ ++M ++ +P+ T+ +++ G DE + ++ + + D Y L++
Sbjct: 521 KLYKDM-QVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIE---MRRDWAPDEPVYGLLV 576
Query: 459 HGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE-VKQKHMYDA 504
+A + A ++ M+ + P TC +L +K DA
Sbjct: 577 DLWGKAGNVDKALGWYQAMLQDGLQPNVPTCNSLLSAFLKMNRFQDA 623
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 100/206 (48%), Gaps = 4/206 (1%)
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
TYTT++ L ++ F + ++M KP +N +I+ GRA+ ++EAV V++ E
Sbjct: 362 TYTTMIGILGQARQFGVLKELLDEMSRAHCKPTVVTYNRIIHAYGRANYLKEAVKVFE-E 420
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M E G PD T+ T+I + + G+ + A + M ++ P+ T+ ++ +C G
Sbjct: 421 MQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRMQEVG-LSPDTFTYS-VMVNCLGKG 478
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+L +M+ ++ + ++ TY ++I +A E L+K+M P T
Sbjct: 479 GQLAAAYKLFCEMI-ENGCTPNLVTYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKIT 537
Query: 489 CRLILDEVKQKHMYDAAEKIEAVMKK 514
++++ + D AE + M++
Sbjct: 538 YSIVMEVLGHCGHLDEAEAVFIEMRR 563
>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 175/352 (49%), Gaps = 46/352 (13%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEMS-KG---HIVTLNTIAKVMRRFSGAGQWEDAVRTF 191
+Y ++D + K + + + L EM+ KG +VT NT+ + F G+ ++A+
Sbjct: 201 MYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTL---IYGFCIVGKLKEAIGLL 257
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCI----------------- 233
+E+ + N T N+L+D LCKEGKV+ A+SV + LK+C+
Sbjct: 258 NEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLV 317
Query: 234 ------------------PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISY 275
P+ HT+ I I+G+CK VDEA +EM P +++Y
Sbjct: 318 YEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTY 377
Query: 276 STIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKI 335
S++I C+ S V++L+DEM+ +G P +V+TY++++ L K+G + AI + KMK
Sbjct: 378 SSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKD 437
Query: 336 VGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHE 395
+P+ F L+ L + R+++A V+Q ++ G + T+N MI G E
Sbjct: 438 QEIRPNIFTFTILLDGLCKGGRLKDAQEVFQ-DLLTKGYHLNVYTYNVMINGHCKQGLLE 496
Query: 396 KAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHL 447
+A +L +M C PN TF ++ + FK + D+ +LL M+ + L
Sbjct: 497 EALTMLSKMED-NGCIPNAFTFETIIIALFKKDENDKA-EKLLRQMIARGLL 546
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 170/359 (47%), Gaps = 12/359 (3%)
Query: 153 MRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDT 212
+R + ++K +V NTI M ++ +A F E+ G+ + T N L+
Sbjct: 187 LRKIDGRLTKPDVVMYNTIIDAMCKYQ---LVSEAYGLFSEMAVKGISADVVTYNTLIYG 243
Query: 213 LCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPC 271
C GK++ A + E+ I PN +T+NI + CK +V EA+ + M P
Sbjct: 244 FCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPD 303
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
VI+YST++ Y Y K + + M G P+V TYT +++ K+ +EA+ + +
Sbjct: 304 VITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFK 363
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV--EMPENGVAPDTSTFNTMITMFS 389
+M P ++ LI L ++ R+ YV+ + EM + G D T++++I
Sbjct: 364 EMHQKNMVPGIVTYSSLIDGLCKSGRIS---YVWDLIDEMRDRGQPADVITYSSLIDGLC 420
Query: 390 HHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSL 449
+GH ++A + +M K + +PN+ TF LL K G+ + D + +HL
Sbjct: 421 KNGHLDRAIALFNKM-KDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHL-- 477
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
++ TY ++I+G C+ E A + +M + P T I+ + +K D AEK+
Sbjct: 478 NVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKL 536
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 179/413 (43%), Gaps = 74/413 (17%)
Query: 173 KVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKS 231
K++ F+ + AV L G++ + T+N+L++ C G++ SV + LK
Sbjct: 64 KILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKR 123
Query: 232 CIPPNAHTFNIFIHGWC--------------------KINRVDEAQWT------------ 259
PP+ T N I G C ++N+V A
Sbjct: 124 GYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAA 183
Query: 260 ---IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSY 316
++++ G P V+ Y+TII + C+ S+ Y L EM +G +VVTY T++
Sbjct: 184 IKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYG 243
Query: 317 LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA--------------- 361
G +EAI + +M + P+ +N L+ L + +V+EA
Sbjct: 244 FCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPD 303
Query: 362 -----------VYVYQVE--------MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLE 402
VY+V+ M GV PD T+ +I F + ++A ++ +
Sbjct: 304 VITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFK 363
Query: 403 EMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC 462
EM++ ++ P + T+ L+ K+G+ + L+D+M ++ + D+ TY+ +I GLC
Sbjct: 364 EMHQ-KNMVPGIVTYSSLIDGLCKSGRISY-VWDLIDEMRDRGQPA-DVITYSSLIDGLC 420
Query: 463 RANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEAVMKK 514
+ + A LF +M +I P T ++LD + K + DA E + ++ K
Sbjct: 421 KNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTK 473
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 113/232 (48%), Gaps = 16/232 (6%)
Query: 83 VFQSLKQDHVCNA-----IQPSHYLVNKLIHRFKDD--WKSALGIFR---WAGSCPGYEH 132
V++ K HV NA + P + LI+ F + AL +F+ PG
Sbjct: 317 VYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIV- 375
Query: 133 SSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTF 191
Y ++D L K ++ + L++EM +G + T + ++ G + A+ F
Sbjct: 376 ---TYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALF 432
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKI 250
+++ + N T +LLD LCK G+++ A+ VF +L + N +T+N+ I+G CK
Sbjct: 433 NKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQ 492
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
++EA + +M+ +GC P ++ TII + ++ K +LL +M A+G
Sbjct: 493 GLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARG 544
>gi|356546522|ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 789
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/420 (26%), Positives = 203/420 (48%), Gaps = 10/420 (2%)
Query: 91 HVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQM 150
H+ +++PS LV ++ R + D + AL F WA Y H +Y ++D+L K +
Sbjct: 156 HLLRSLKPS--LVCAVL-RSQADERVALNFFYWADRQWRYSHHPLVYYTLLDVLSKTKLC 212
Query: 151 DQMRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLL 209
R +L M++ I ++ VM +S AG+ +A+R + G+E N N
Sbjct: 213 QGARRVLRLMTRRGIELSPEAFGCVMVSYSRAGKLRNALRVLTLMQKAGVEPNLSICNTT 272
Query: 210 LDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGC 268
+ L K K+E A ++ + I P+ T+N I G+C +NR+++A I + GC
Sbjct: 273 IYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGC 332
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEM-QAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
P +SY T++ C++ +V L+++M Q P+ VTY T++ L+K G ++A+
Sbjct: 333 PPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDAL 392
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITM 387
++ + G D ++ ++++ + R+ EA + ++M PD T+ ++
Sbjct: 393 AFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLV-IDMYSRSCNPDVVTYTAIVDG 451
Query: 388 FSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHL 447
F G ++A +L++M K CKPN ++ LL +GK+ E + ++ +H
Sbjct: 452 FCRLGRIDEAKKMLQQMYK-HGCKPNTVSYTALLNGLCHSGKSLEAREMI--NVSEEHWW 508
Query: 448 SLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEK 507
+ + TY +V+HG R K A L +EM+ P L++ + Q A+K
Sbjct: 509 TPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKK 568
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 113/430 (26%), Positives = 205/430 (47%), Gaps = 30/430 (6%)
Query: 65 PDIDVIISKVHV---GSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIF 121
P++ + + ++V G ++ + L++ V I+P N LI + D + +
Sbjct: 264 PNLSICNTTIYVLVKGCKLEKALRFLERMQV-TGIKPDIVTYNSLIKGYCDLNRIEDALE 322
Query: 122 RWAG----SCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGH-----IVTLNTIA 172
AG CP + S Y ++ L K ++++Q++ L+E+M + VT NT+
Sbjct: 323 LIAGLPSKGCPPDKVS---YYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLI 379
Query: 173 KVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--K 230
++ S G +DA+ E G + + ++ + C++G+++ A+S+ +++ +
Sbjct: 380 HML---SKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSR 436
Query: 231 SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSK 290
SC P+ T+ + G+C++ R+DEA+ +Q+M HGC P +SY+ ++ C +
Sbjct: 437 SC-NPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLE 495
Query: 291 VYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIY 350
E+++ + PN +TY VM + G EA +T +M G P N LI
Sbjct: 496 AREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQ 555
Query: 351 TLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHC 410
+L + +V EA Y E G A + F T+I F G E A VLE+M L +
Sbjct: 556 SLCQNQKVVEA-KKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDM-YLSNK 613
Query: 411 KPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT--TYTLVIHGLCRANKCE 468
P+ T+ L + K G+ DE ++L+ M++K LD T T+ VIH C+ + +
Sbjct: 614 HPDAVTYTALFDALGKKGRLDEA-AELIVKMLSK---GLDPTPVTFRSVIHRYCQWGRVD 669
Query: 469 WAYLLFKEMI 478
L M+
Sbjct: 670 DMLNLLDRMV 679
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 98/393 (24%), Positives = 185/393 (47%), Gaps = 14/393 (3%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQW 184
G E + I + +L K ++++ LE M K IVT N++ K + +
Sbjct: 261 GVEPNLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIK---GYCDLNRI 317
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNI 242
EDA+ L + G + + ++ LCKE K+E + + ++ S + P+ T+N
Sbjct: 318 EDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNT 377
Query: 243 FIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
IH K D+A ++E + G H + YS I+ S+C++ + L+ +M ++
Sbjct: 378 LIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRS 437
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
C P+VVTYT ++ + G +EA ++ ++M G KP++ + L+ L + + EA
Sbjct: 438 CNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAR 497
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLK 422
+ V E+ P+ T+ ++ F G +A + EM + + P + L++
Sbjct: 498 EMINVS-EEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVE-KGFFPTPVEINLLIQ 555
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
S + K E + L++ +NK ++++ +T VIHG C+ E A + ++M +
Sbjct: 556 SLCQNQKVVEA-KKYLEECLNKG-CAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNK 613
Query: 483 TPRYQTCRLILDEVKQKHMYD-AAEKIEAVMKK 514
P T + D + +K D AAE I ++ K
Sbjct: 614 HPDAVTYTALFDALGKKGRLDEAAELIVKMLSK 646
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 158/367 (43%), Gaps = 38/367 (10%)
Query: 98 PSHYLVNKLIHRFKDDWKS--ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRA 155
P N LIH + AL + A G+ Y +V + +MD+ ++
Sbjct: 370 PDQVTYNTLIHMLSKHGHADDALAFLKEAED-KGFHIDKVGYSAIVHSFCQKGRMDEAKS 428
Query: 156 LLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLC 214
L+ +M S+ + T ++ F G+ ++A + ++ G + NT + LL+ LC
Sbjct: 429 LVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLC 488
Query: 215 KEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI 273
GK AR + + + PNA T+ + +HG+ + ++ EA +EM G P +
Sbjct: 489 HSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPV 548
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
+ +IQS C+ + + L+E +GC NVV +TTV+ + GD E A+ + E M
Sbjct: 549 EINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDM 608
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
+ PD+ + L LG+ R+ EA + V+M G+ P TF ++I + G
Sbjct: 609 YLSNKHPDAVTYTALFDALGKKGRLDEAAELI-VKMLSKGLDPTPVTFRSVIHRYCQWGR 667
Query: 394 HEKAFHVLEEMNK--------------------LEHC------------KPNVQTFHPLL 421
+ ++L+ M K LE K + T H L+
Sbjct: 668 VDDMLNLLDRMVKRKPFRTIYNHVIEKLCDFGNLEEAEKLLGKVLRTASKLDANTCHVLM 727
Query: 422 KSCFKTG 428
+SC K G
Sbjct: 728 ESCLKKG 734
>gi|242094080|ref|XP_002437530.1| hypothetical protein SORBIDRAFT_10g028820 [Sorghum bicolor]
gi|241915753|gb|EER88897.1| hypothetical protein SORBIDRAFT_10g028820 [Sorghum bicolor]
Length = 540
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 172/356 (48%), Gaps = 20/356 (5%)
Query: 176 RRFSGAGQWEDAVRTFDEL-------------GTFGLEKNTETMNLLLDTLCKEGKVELA 222
RR++ G+ + A R F L G E + L +D LCKEG A
Sbjct: 107 RRYARLGRTDSAARAFRFLQRHPGCYAVESDDGAPAAEAAVSPLILTVDALCKEGHPRAA 166
Query: 223 RSVFLELK---SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
+ +++ P+ +NI ++GW + R+D+ + M+ G P V++Y T I
Sbjct: 167 ARLVAQVRREDGGWAPDVRVYNILLNGWSRARRLDKVEKLWAAMRDEGVRPTVVTYGTFI 226
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
+YC + LLD+M+ +G N++T ++ LA++G F +A ++ EK + G
Sbjct: 227 DAYCVMRRPDQAMTLLDQMREEGIQANLLTCNPIVYALAQAGRFGDAHKVLEKFPLYGVS 286
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
P+ FN L++ + + A V + M G++P T+N +FS + E +
Sbjct: 287 PNISTFNSLVFGYCKHGDLAGASGVLKA-MLGRGISPTARTYNYFFMVFSRNRSIELGMN 345
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIH 459
+ +M + P+ T+H L+K + + + L Q+L +M N + D T T++IH
Sbjct: 346 LYVKMVSNGYA-PDQFTYHLLIKMLCEANRLELTL-QMLQEMRN-NGFEPDQATSTMLIH 402
Query: 460 GLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
LCR + E A+ F++M I P+Y T R+++ E+K+ + +K+ +M+ +
Sbjct: 403 LLCRRHHFEEAFAEFEQMFERGIVPQYITYRMLMKELKRLGLVKLVQKLADLMRSV 458
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 126/306 (41%), Gaps = 14/306 (4%)
Query: 61 SPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGI 120
SP + +D + + H ++ V Q ++D P + N L+ + W A +
Sbjct: 148 SPLILTVDALCKEGHPRAAARLVAQVRRED---GGWAPDVRVYNILL----NGWSRARRL 200
Query: 121 FR----WAG-SCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKV 174
+ WA G + Y +D +R+ DQ LL++M + I L T +
Sbjct: 201 DKVEKLWAAMRDEGVRPTVVTYGTFIDAYCVMRRPDQAMTLLDQMREEGIQANLLTCNPI 260
Query: 175 MRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCI 233
+ + AG++ DA + ++ +G+ N T N L+ CK G + A V L I
Sbjct: 261 VYALAQAGRFGDAHKVLEKFPLYGVSPNISTFNSLVFGYCKHGDLAGASGVLKAMLGRGI 320
Query: 234 PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
P A T+N F + + ++ +M +G P +Y +I+ C +
Sbjct: 321 SPTARTYNYFFMVFSRNRSIELGMNLYVKMVSNGYAPDQFTYHLLIKMLCEANRLELTLQ 380
Query: 294 LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLG 353
+L EM+ G P+ T T ++ L + FEEA E+M G P + L+ L
Sbjct: 381 MLQEMRNNGFEPDQATSTMLIHLLCRRHHFEEAFAEFEQMFERGIVPQYITYRMLMKELK 440
Query: 354 RASRVQ 359
R V+
Sbjct: 441 RLGLVK 446
>gi|297795313|ref|XP_002865541.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311376|gb|EFH41800.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 711
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 155/303 (51%), Gaps = 4/303 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTI-AKVMRRFSGAGQWEDA 187
G Y +++D + + R +L+EM G + + + ++++ + G+W+
Sbjct: 371 GVSPDEHTYSLLIDAYVNAGRWESARIVLKEMETGDVQPNSFVFSRLLAGYRDRGEWQKT 430
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHG 246
+ E+ + G++ + + N+++DT K ++ A + F + S I P+ T+N I
Sbjct: 431 FQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDC 490
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
CK R A+ + M+ GC PC +Y+ +I SY Q + + LL +M++QG PN
Sbjct: 491 HCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPN 550
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
VVT+TT++ KSG F +AI E+MK VG KP S +N LI + ++AV ++
Sbjct: 551 VVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFR 610
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
V M +G+ P N++I F +AF VL+ M K KP+V T+ L+K+ +
Sbjct: 611 V-MTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYM-KENGVKPDVVTYTTLMKALIR 668
Query: 427 TGK 429
K
Sbjct: 669 VDK 671
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/388 (22%), Positives = 182/388 (46%), Gaps = 8/388 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQ--MRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWE 185
GY+ Y +++ L + ++D ++ L +E+ + + + + + ++ F+ +G
Sbjct: 229 GYQSDFVNYSLVIQSLTRCNKIDSVMLQRLYKEIERDKLELDVQLVNDIIMGFAKSGDPS 288
Query: 186 DAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFI 244
A++ GL T T+ ++ L G+ A ++F EL+ S I P +N +
Sbjct: 289 RALQLLGMAQATGLSAKTATLVSIISALANSGRTLEAEALFEELRQSGIKPRTKAYNALL 348
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
G+ K + +A+ + EM+ G P +YS +I +Y + +L EM+
Sbjct: 349 KGYVKTGPLKDAELMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMETGDVQ 408
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
PN ++ +++ G++++ ++ ++MK +G KPD +F+N +I T G+ + + A+
Sbjct: 409 PNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTT 468
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
+ M G+ PD T+NT+I HG H A + E M + C P T++ ++ S
Sbjct: 469 FD-RMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMER-RGCLPCATTYNIMINSY 526
Query: 425 FKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
+ D+ + +LL M ++ L ++ T+T ++ ++ + A +EM + P
Sbjct: 527 GDQERWDD-MKRLLGKMKSQGILP-NVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKP 584
Query: 485 RYQTCRLILDEVKQKHMYDAAEKIEAVM 512
+++ Q+ + + A VM
Sbjct: 585 SSTMYNALINAYAQRGLSEQAVNAFRVM 612
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 145/342 (42%), Gaps = 58/342 (16%)
Query: 59 VDSPRLPDIDVIISKVHV-GSSEDEVFQSLKQDHVCNA-----------------IQPSH 100
V + L D ++++S++ G S DE SL D NA +QP+
Sbjct: 352 VKTGPLKDAELMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMETGDVQPNS 411
Query: 101 YLVNKLIHRFKD--DWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLE 158
++ ++L+ ++D +W+ + + S G + + Y +++D GK +D +
Sbjct: 412 FVFSRLLAGYRDRGEWQKTFQVLKEMKSI-GVKPDRQFYNVVIDTFGKFNCLDHAMTTFD 470
Query: 159 EM-SKG--------------------HIVTLNTIAKVMRR---------------FSGAG 182
M S+G HIV + RR +
Sbjct: 471 RMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQE 530
Query: 183 QWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFN 241
+W+D R ++ + G+ N T L+D K G+ A E+KS + P++ +N
Sbjct: 531 RWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYN 590
Query: 242 IFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ 301
I+ + + ++A + M G P +++ +++I ++ ++ + +L M+
Sbjct: 591 ALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKEN 650
Query: 302 GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSR 343
G P+VVTYTT+M L + F++ + E+M + G KPD +
Sbjct: 651 GVKPDVVTYTTLMKALIRVDKFQKVPGVYEEMIMSGCKPDRK 692
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 136/332 (40%), Gaps = 50/332 (15%)
Query: 220 ELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
+L + L K + P T+N I + N +++A I M+ G ++YS +I
Sbjct: 184 KLYEAFLLSQKQTLTP--LTYNALIGACARNNDIEKALNLISRMRQDGYQSDFVNYSLVI 241
Query: 280 QS-------------------------------------YCRQYNFSKVYELLDEMQAQG 302
QS + + + S+ +LL QA G
Sbjct: 242 QSLTRCNKIDSVMLQRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSRALQLLGMAQATG 301
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
T +++S LA SG EA + E+++ G KP ++ +N L+ + +++A
Sbjct: 302 LSAKTATLVSIISALANSGRTLEAEALFEELRQSGIKPRTKAYNALLKGYVKTGPLKDAE 361
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLK 422
+ EM + GV+PD T++ +I + + G E A VL+EM + +PN F LL
Sbjct: 362 LMVS-EMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMETGD-VQPNSFVFSRLLA 419
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
G+ + Q+L +M + D Y +VI + N + A F M+ I
Sbjct: 420 GYRDRGEWQKTF-QVLKEM-KSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGI 477
Query: 483 TPRYQTCRLILD-------EVKQKHMYDAAEK 507
P T ++D + + M++A E+
Sbjct: 478 EPDRVTWNTLIDCHCKHGRHIVAEEMFEAMER 509
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 112/253 (44%), Gaps = 44/253 (17%)
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
C + YS +I + R K+YE Q Q P +TY ++ A++ D E+A+
Sbjct: 165 CFSYELLYSILIHALGRS---EKLYEAFLLSQKQTLTP--LTYNALIGACARNNDIEKAL 219
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY--VYQ----------VEMPEN--- 372
+ +M+ G + D ++ +I +L R +++ + +Y+ V++ +
Sbjct: 220 NLISRMRQDGYQSDFVNYSLVIQSLTRCNKIDSVMLQRLYKEIERDKLELDVQLVNDIIM 279
Query: 373 ---------------------GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCK 411
G++ T+T ++I+ ++ G +A + EE+ + K
Sbjct: 280 GFAKSGDPSRALQLLGMAQATGLSAKTATLVSIISALANSGRTLEAEALFEELRQ-SGIK 338
Query: 412 PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAY 471
P + ++ LLK KTG + ++L+ + K +S D TY+L+I A + E A
Sbjct: 339 PRTKAYNALLKGYVKTGPLKD--AELMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESAR 396
Query: 472 LLFKEMIGHDITP 484
++ KEM D+ P
Sbjct: 397 IVLKEMETGDVQP 409
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 187/374 (50%), Gaps = 13/374 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKG---HIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
+ +MVD + + AL++ M SKG IVT N++ K + R +G W+ A F
Sbjct: 194 HNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCR---SGMWDKAWEVFK 250
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKIN 251
E+ FG+ + + +L+ C+ G++E A ++ E++ I P+ +F+ I + +
Sbjct: 251 EMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRG 310
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
++D A ++EM+ G P + Y+ +I +CR S + DEM GC P+VVTY
Sbjct: 311 KMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYN 370
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
T+++ L K +A + +M+ G PD F LI+ ++ +A+ ++ M
Sbjct: 371 TLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDT-MLN 429
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
+ PD T+NT+I G +KA + ++M+ E PN T+ L+ S + G+ +
Sbjct: 430 QRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSRE-IFPNHVTYSILIDSHCEKGQVE 488
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCR- 490
+ LD+M+NK L +I TY +I G CR+ ++M+ + ++P T
Sbjct: 489 DAFG-FLDEMINKGILP-NIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNT 546
Query: 491 LILDEVKQKHMYDA 504
LI +K+ M+DA
Sbjct: 547 LIHGYIKEDKMHDA 560
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 164/350 (46%), Gaps = 6/350 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTI-AKVMRRFSGAGQWEDAVRTFDELG 195
+ ++ + + +MD A L EM +V I V+ F AG DA+R DE+
Sbjct: 299 FSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMV 358
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVD 254
G + T N LL+ LCKE ++ A + E++ +PP+ TF IHG+C ++D
Sbjct: 359 GCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLD 418
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
+A M P +++Y+T+I CRQ + K +L D+M ++ PN VTY+ ++
Sbjct: 419 KALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILI 478
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
+ G E+A ++M G P+ +N +I R+ V + Q +M N V
Sbjct: 479 DSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQ-KMMVNKV 537
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
+PD T+NT+I + AF +L M K E +P+V T++ L+ G E
Sbjct: 538 SPDLITYNTLIHGYIKEDKMHDAFKLLNMMEK-EKVQPDVVTYNMLINGFSVHGNVQEA- 595
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
+ + M K + D TY +I+G A + A+ L EM+ P
Sbjct: 596 GWIFEKMCAKG-IEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAP 644
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/484 (21%), Positives = 219/484 (45%), Gaps = 23/484 (4%)
Query: 22 RIRFHSSSENCSHIVSSSPIESYCSD------GARLDHHQVLCVDSPRLPDIDV--IISK 73
R+ F S+SE ++ ++ + +YC A + + CV PD+ ++
Sbjct: 145 RLVFSSNSEVNTYTLNIM-VHNYCKALEFDKVDAVISEMEKRCV----FPDVVTHNVMVD 199
Query: 74 VHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYE 131
+ + E +L V ++P N ++ W A +F+ G
Sbjct: 200 ARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDF-GVA 258
Query: 132 HSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRT 190
+ +++ +V ++++ + +EM +G L + + ++ F+ G+ + A+
Sbjct: 259 PDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAY 318
Query: 191 FDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCK 249
E+ FGL + +++ C+ G + A V E+ C P+ T+N ++G CK
Sbjct: 319 LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 378
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
R+ +A+ + EM+ G P + +++T+I YC + K +L D M Q P++VT
Sbjct: 379 ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 438
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM 369
Y T++ + + GD ++A + + M P+ ++ LI + +V++A + + EM
Sbjct: 439 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDA-FGFLDEM 497
Query: 370 PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
G+ P+ T+N++I + G+ K L++M + P++ T++ L+ K K
Sbjct: 498 INKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKM-MVNKVSPDLITYNTLIHGYIKEDK 556
Query: 430 TDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP-RYQT 488
+ L +M+ K + D+ TY ++I+G + A +F++M I P RY
Sbjct: 557 MHDAFKLL--NMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTY 614
Query: 489 CRLI 492
+I
Sbjct: 615 MSMI 618
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 138/307 (44%), Gaps = 37/307 (12%)
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
N +T NI +H +CK D+ I EM+ P V++++ ++ + R + L+
Sbjct: 155 NTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALV 214
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
D M ++G P +VTY +V+ L +SG +++A + ++M G PD R F LI R
Sbjct: 215 DSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRV 274
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE------- 408
++EA+ +Y+ EM G+ PD +F+ +I +F+ G + A L EM
Sbjct: 275 GEIEEALKIYK-EMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVI 333
Query: 409 ---------------------------HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDM 441
C P+V T++ LL K + + LL++M
Sbjct: 334 YTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDA-EGLLNEM 392
Query: 442 VNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHM 501
+ + D+ T+T +IHG C K + A LF M+ + P T ++D + ++
Sbjct: 393 -RERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGD 451
Query: 502 YDAAEKI 508
D A +
Sbjct: 452 LDKANDL 458
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 105/211 (49%), Gaps = 4/211 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLN-TIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++D + + +D+ L ++M I + T + ++ GQ EDA DE+
Sbjct: 439 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 498
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLE--LKSCIPPNAHTFNIFIHGWCKINRV 253
G+ N T N ++ C+ G V + FL+ + + + P+ T+N IHG+ K +++
Sbjct: 499 NKGILPNIMTYNSIIKGYCRSGNVSKGQK-FLQKMMVNKVSPDLITYNTLIHGYIKEDKM 557
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
+A + M+ P V++Y+ +I + N + + ++M A+G P+ TY ++
Sbjct: 558 HDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSM 617
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRF 344
++ +G+ +EA ++ ++M G PD +F
Sbjct: 618 INGHVTAGNSKEAFQLHDEMLQRGFAPDDKF 648
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 177/356 (49%), Gaps = 14/356 (3%)
Query: 166 VTLNTIAK--VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVE--- 220
V+LN + ++R F AG E +R F+E+ N T N ++ CK +++
Sbjct: 199 VSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAF 258
Query: 221 -LARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
L RS+ LE + PN T+N+ I+G C++ R++E + EM G P ++Y+T++
Sbjct: 259 KLLRSMGLE---GLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLV 315
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
YC+ NF + L EM G PP+VVTYT++++ + K+G+ A+ ++M + G +
Sbjct: 316 NGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLR 375
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
P+ + LI + + EA ++ EM +G P T+N ++ G E+A
Sbjct: 376 PNGVTYTSLINGFSQKGFMDEAYRIWD-EMIRSGFPPTIVTYNALLNGHCVSGRMEEAIG 434
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIH 459
+L M + P+V ++ ++ + + D Q+ +MV K +S D TY+ +I
Sbjct: 435 LLRGMEG-KGLSPDVVSYSTIIAGFCRYQELDRAF-QMNAEMVEK-GVSPDAITYSSLIQ 491
Query: 460 GLCRANKCEWAYLLFKEMIGHDITP-RYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
GLC + A LF+EM+ + P + LI K+ + +A + ++KK
Sbjct: 492 GLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKK 547
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 189/407 (46%), Gaps = 30/407 (7%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKG----HIVTLNTIAKVMRRFSGAGQW 184
G+ Y +V+ KV Q L EM + +VT ++ M + AG
Sbjct: 303 GFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCK---AGNL 359
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIF 243
A+ FD++ GL N T L++ ++G ++ A ++ E+ +S PP T+N
Sbjct: 360 NRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNAL 419
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
++G C R++EA ++ M+G G P V+SYSTII +CR + +++ EM +G
Sbjct: 420 LNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGV 479
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
P+ +TY++++ L + EA + ++M PD + LI + + EA+
Sbjct: 480 SPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALN 539
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
++ EM + G PDT T+N +I + +A +L ++ E PN T+ L++S
Sbjct: 540 LHD-EMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESI-PNGITYDTLIES 597
Query: 424 C----FKT-----------GKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
C FK+ G +E Q+ + M+ ++ + Y ++IHG CR
Sbjct: 598 CSDIEFKSVVALIKGFCMKGLMNEA-DQVFESMIKRNQ-KPNEAVYNVIIHGHCRDGNVH 655
Query: 469 WAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
A+ L+KEM+ P T I+ VK + E++ V++ +
Sbjct: 656 KAHKLYKEMVDFGFIPHTVT---IIALVKALYSEGMDEQLNLVIRDI 699
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 157/330 (47%), Gaps = 6/330 (1%)
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK-VELARSVFLEL-KSCIPPNAHTFNI 242
E A+ D G + N +LD++ + K V A V+ E+ S + N ++NI
Sbjct: 149 EKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNI 208
Query: 243 FIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
I G+C ++ +EM+ + C P V++Y+T+I +YC+ + ++LL M +G
Sbjct: 209 LIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEG 268
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
PN++TY V++ L + G EE + +M G PD +N L+ + +A+
Sbjct: 269 LEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQAL 328
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLK 422
V EM NG+ PD T+ ++I G+ +A ++M+ + +PN T+ L+
Sbjct: 329 -VLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMH-VRGLRPNGVTYTSLIN 386
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
+ G DE ++ D+M+ + I TY +++G C + + E A L + M G +
Sbjct: 387 GFSQKGFMDEAY-RIWDEMI-RSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGL 444
Query: 483 TPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
+P + I+ + D A ++ A M
Sbjct: 445 SPDVVSYSTIIAGFCRYQELDRAFQMNAEM 474
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 108/269 (40%), Gaps = 18/269 (6%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G + Y ++ L + R++++ L +EM +K + T ++ + G +A
Sbjct: 478 GVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEA 537
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL----------------KS 231
+ DE+ G +T T N+L++ L K+ + A+ + L+L +S
Sbjct: 538 LNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIES 597
Query: 232 CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKV 291
C + I G+C ++EA + M P Y+ II +CR N K
Sbjct: 598 CSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKA 657
Query: 292 YELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYT 351
++L EM G P+ VT ++ L G E+ + + D+ L+
Sbjct: 658 HKLYKEMVDFGFIPHTVTIIALVKALYSEGMDEQLNLVIRDILRSCKLSDAELSKALVQI 717
Query: 352 LGRASRVQEAVYVYQVEMPENGVAPDTST 380
+ + +AV+ EM ++G P +
Sbjct: 718 NHKEGNI-DAVFNLLTEMAKDGFLPSGAA 745
>gi|413938979|gb|AFW73530.1| ATP binding protein [Zea mays]
Length = 551
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 114/432 (26%), Positives = 193/432 (44%), Gaps = 31/432 (7%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILG----KVRQMDQMRALL 157
LV ++HR + + K A F WA GY H Y ++DIL K RQ + +L
Sbjct: 110 LVADVLHRLRYEEKLAFRFFAWASQQDGYSHEPTTYNDIIDILSGTRYKSRQFGVLCNVL 169
Query: 158 EEMSK--GHIVTLNTIAKVMRRFSG---------AGQWEDAVRTFDELGTFGLEKNTETM 206
+ M + V + + +++R ++ A + +RT E T+ +
Sbjct: 170 DHMKRHGSRSVPVEGLLEILRAYTEKHLTHMRKLAKKRRVRMRTPPE---------TDAL 220
Query: 207 NLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
N+LLD CK G V+ A +VF +K + NA T++ GWC+ +A ++EM
Sbjct: 221 NVLLDAFCKCGMVKEAEAVFGRVKRKLLGNAETYSTLFFGWCRARDPKKAMKVLEEMIQM 280
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG---CPPNVVTYTTVMSYLAKSGDF 323
P +Y I+S+C S+ EL + M+ +G P TY+ ++ LAK+
Sbjct: 281 KHTPESFTYVAAIESFCSAGLVSEARELFEFMRTEGLTVSSPTAKTYSIMIVALAKADRM 340
Query: 324 EEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNT 383
EE + M+ G PD + LI + R+ +A Y EM G PD T+N
Sbjct: 341 EECFELLSDMRTCGCMPDVTTYKDLIEGMCLVGRL-DAAYRVLDEMGRAGFPPDIVTYNC 399
Query: 384 MITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVN 443
+ + + + A + E M + HC+P+V T++ L+ F+ G+ L L+ ++
Sbjct: 400 FLNVLCSLRNADDALELCERMIE-AHCEPSVHTYNMLMMMFFEMGEAHRALDIWLE--MD 456
Query: 444 KHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYD 503
K I TY ++I+GL + E+A L E+I D+ Y+ I+ +
Sbjct: 457 KRGCQRAIDTYEIMIYGLFDCGETEYATALLDEVINRDMKLSYKKFDAIMLRLSAVGNLG 516
Query: 504 AAEKIEAVMKKL 515
A ++ M+K
Sbjct: 517 AIHRLSEHMRKF 528
>gi|297745567|emb|CBI40732.3| unnamed protein product [Vitis vinifera]
Length = 520
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/413 (26%), Positives = 191/413 (46%), Gaps = 11/413 (2%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS 161
+V+++I+R ++ + F WA P + Y +++ LG+ + ++ + +L++M
Sbjct: 93 IVSEVINRGNLGGEAMVIFFNWAVKQPTIPKDVDTYNVIIKALGRRKFIEFVVKVLKDMH 152
Query: 162 -KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVE 220
+G T++ VM F A Q A+ F L FG + +TE++N+LL LC+ V
Sbjct: 153 IQGISPNYETLSIVMDSFIKARQVSKAIEMFRNLEEFGGKCDTESLNVLLQCLCQRSHVG 212
Query: 221 LARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQ 280
A F +K IP N T+NI I GW K ++ E + ++ M G P +++S +I+
Sbjct: 213 AANLFFNAMKGGIPFNCMTYNIIIGGWSKYGKIGEMERCLKAMVADGFSPNCLTFSHLIE 272
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
R E+ M+ GC PN Y ++S + DF+E ++ M P
Sbjct: 273 GLGRAGRIDDAVEVFHHMEETGCVPNACVYNALISNFISTRDFDECLKYYNFMVSSNCDP 332
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
+ + LI +A +V +A+ + EM G+ P T + I +G A +
Sbjct: 333 NMDTYTKLIVAFLKARKVADALEMLD-EMVGRGMIPTTGAITSFIEPLCQYGPPHAAMMI 391
Query: 401 LEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHG 460
++ K+ C+ ++ + LL + GK L+ L D+M + S D Y VI+G
Sbjct: 392 YKKARKV-GCRISLSAYKLLLMRLSRFGKCGMLLN-LWDEMQESGY-SSDTEVYEYVING 448
Query: 461 LCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
LC + + A L+ +E + P RLI ++ K + A+ K+E K
Sbjct: 449 LCNIGQLDTAVLVMEESLHKGFCPS----RLIRSKLNNKLL--ASNKVEMAYK 495
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 154/304 (50%), Gaps = 11/304 (3%)
Query: 207 NLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKG 265
N +++ LCKE ++E A + +E++ S PN+ T+ I + G CK RV+EA + EMK
Sbjct: 14 NTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRLLGEMKR 73
Query: 266 HGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEE 325
G V+ YST+I +C + + L DEM +G PNVV Y+ +++ K G + E
Sbjct: 74 KGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWRE 133
Query: 326 AIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMI 385
A + M G +PD + C+I L + R ++A+ ++ + M E G P T T+N +I
Sbjct: 134 ATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDL-MTEKGEEPSTVTYNVLI 192
Query: 386 TMFSHHGHHEKAFHVLEEMNKLEHCKP-NVQTFHPLLKSCFKTGKTDECL---SQLLDDM 441
G AF + E M LE K V +++ L+ GK DE + S LL+D
Sbjct: 193 NGLCKEGCIGDAFKIFETM--LEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLED- 249
Query: 442 VNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHM 501
+++ D+ T+ VI GLC+ + + A ++ MI TC +++ E + +
Sbjct: 250 --GNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGI 307
Query: 502 YDAA 505
D A
Sbjct: 308 IDKA 311
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 169/352 (48%), Gaps = 8/352 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLN--TIAKVMRRFSGAGQWEDAVRTFDEL 194
Y +++ L K +++++ LL EM +G N T +M G+ E+A+R E+
Sbjct: 13 YNTIINGLCKEKRLEKAVDLLVEM-EGSSCEPNSFTYCILMDGLCKEGRVEEAMRLLGEM 71
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRV 253
GLE + + L+ C +G ++ +++F E L+ I PN ++ I+G+CK
Sbjct: 72 KRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLW 131
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
EA + M G P V +Y+ +I C+ K +L D M +G P+ VTY +
Sbjct: 132 REATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVL 191
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE-N 372
++ L K G +A +I E M G + + +N LI L ++ EA+ ++ + + N
Sbjct: 192 INGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGN 251
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
V PD TFNT+I G +KA + + M + N+ T H L+ K+G D+
Sbjct: 252 YVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIE-RGSFGNLFTCHILIGEYIKSGIIDK 310
Query: 433 CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
+ L V+K L TTY+++I G C+ + +A LF M ++P
Sbjct: 311 AME--LWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSP 360
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 148/306 (48%), Gaps = 7/306 (2%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTF 240
G+ A+ FD + G E +T T N+L++ LCKEG + A +F L+ ++
Sbjct: 164 GRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSY 223
Query: 241 NIFIHGWCKINRVDEAQWTIQEM--KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
N I G C ++DEA + G+ P VI+++T+IQ C++ K E+ D M
Sbjct: 224 NTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTM 283
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRV 358
+G N+ T ++ KSG ++A+ + +++ +G P S ++ +I + +
Sbjct: 284 IERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHML 343
Query: 359 QEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFH 418
A ++ M +G++P +NT++ E+A + +EM K +C+P+ +F+
Sbjct: 344 NFAKGLFS-RMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEM-KESNCEPDTISFN 401
Query: 419 PLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
++ K G +LL+DM + L+ D TY+ I+ L + + E A F MI
Sbjct: 402 IMIDGTLKAGDIHSA-KELLNDM-QQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMI 459
Query: 479 GHDITP 484
ITP
Sbjct: 460 ASGITP 465
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 157/351 (44%), Gaps = 43/351 (12%)
Query: 95 AIQPSHYLVNKLIHRFKDDWKS--ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQ 152
IQP Y +I D ++ AL +F G E S+ Y ++++ L K +
Sbjct: 145 GIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTE-KGEEPSTVTYNVLINGLCKEGCIGD 203
Query: 153 MRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG--LEKNTETMNLL 209
+ E M KG + + + ++ G+ ++A++ F L G +E + T N +
Sbjct: 204 AFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTV 263
Query: 210 LDTLCKEGKVELA---------RSVFLELKSC---------------------------I 233
+ LCKEG+++ A R F L +C +
Sbjct: 264 IQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGL 323
Query: 234 PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
P++ T+++ I G+CK++ ++ A+ MK G P + Y+T++ S C++ + +
Sbjct: 324 VPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARR 383
Query: 294 LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLG 353
L EM+ C P+ +++ ++ K+GD A + M+ +G PD+ ++ I L
Sbjct: 384 LFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLS 443
Query: 354 RASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
+ +++EA + M +G+ PD ++++I F + E+ ++L +M
Sbjct: 444 KLGQMEEAKGAFD-SMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQM 493
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 176/381 (46%), Gaps = 9/381 (2%)
Query: 131 EHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVR 189
E +S Y +++D L K ++++ LL EM KG V + + ++ F G +
Sbjct: 42 EPNSFTYCILMDGLCKEGRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKA 101
Query: 190 TFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWC 248
FDE+ G+ N + L++ CK+G A +V + + I P+ +T+ I G C
Sbjct: 102 LFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLC 161
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
K R +A M G P ++Y+ +I C++ +++ + M +G VV
Sbjct: 162 KDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVV 221
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGS--KPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
+Y T++ L +G +EA+++ + G+ +PD FN +I L + R+ +AV +Y
Sbjct: 222 SYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYD 281
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
M E G + T + +I + G +KA + + ++KL P+ T+ ++ K
Sbjct: 282 T-MIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKL-GLVPSSTTYSVMIDGFCK 339
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
+ ++ L + LS + Y ++ LC+ + E A LF+EM + P
Sbjct: 340 MHMLN--FAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDT 397
Query: 487 QTCRLILD-EVKQKHMYDAAE 506
+ +++D +K ++ A E
Sbjct: 398 ISFNIMIDGTLKAGDIHSAKE 418
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 171/402 (42%), Gaps = 17/402 (4%)
Query: 85 QSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVD 142
++L + + I P+ + + LI+ F K W+ A + G + Y M+
Sbjct: 100 KALFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTE-RGIQPDVYTYTCMIG 158
Query: 143 IL---GKVRQ-MDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
L G+ R+ +D + E+ + VT N + + + G DA + F+ + G
Sbjct: 159 GLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCK---EGCIGDAFKIFETMLEKG 215
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVF---LELKSCIPPNAHTFNIFIHGWCKINRVDE 255
+ N L+ LC GK++ A +F LE + + P+ TFN I G CK R+D+
Sbjct: 216 KRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDK 275
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
A M G + + +I Y + K EL + G P+ TY+ ++
Sbjct: 276 AVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMID 335
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
K A + +MKI G P +N L+ +L + S +++A ++Q EM E+
Sbjct: 336 GFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQ-EMKESNCE 394
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS 435
PDT +FN MI G A +L +M ++ P+ T+ + K G+ +E
Sbjct: 395 PDTISFNIMIDGTLKAGDIHSAKELLNDMQQM-GLTPDAYTYSSFINRLSKLGQMEEA-K 452
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
D M+ ++ D Y +I G ++ E L ++M
Sbjct: 453 GAFDSMI-ASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQM 493
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 103/209 (49%), Gaps = 4/209 (1%)
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI 329
P ++SY+TII C++ K +LL EM+ C PN TY +M L K G EEA+R+
Sbjct: 8 PDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRL 67
Query: 330 TEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFS 389
+MK G + D ++ LI + ++ EM E G++P+ ++ +I F
Sbjct: 68 LGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFD-EMLEKGISPNVVVYSCLINGFC 126
Query: 390 HHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSL 449
G +A VL M + +P+V T+ ++ K G+ + L L D++ +
Sbjct: 127 KKGLWREATAVLHTMTE-RGIQPDVYTYTCMIGGLCKDGRARKALD--LFDLMTEKGEEP 183
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMI 478
TY ++I+GLC+ A+ +F+ M+
Sbjct: 184 STVTYNVLINGLCKEGCIGDAFKIFETML 212
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 72/163 (44%), Gaps = 1/163 (0%)
Query: 191 FDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCK 249
F + GL N L+ +LCKE +E AR +F E+K S P+ +FNI I G K
Sbjct: 350 FSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLK 409
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
+ A+ + +M+ G P +YS+ I + + D M A G P+
Sbjct: 410 AGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHV 469
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
Y +++ + + EE I + +M +G D N ++ L
Sbjct: 470 YDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILTFL 512
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 100/229 (43%), Gaps = 10/229 (4%)
Query: 96 IQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRA 155
I Y+ + +I + + WK + G SS Y +M+D K+ ++ +
Sbjct: 297 ILIGEYIKSGIIDKAMELWKRVHKL--------GLVPSSTTYSVMIDGFCKMHMLNFAKG 348
Query: 156 LLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLC 214
L M G TL +M E A R F E+ E +T + N+++D
Sbjct: 349 LFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTL 408
Query: 215 KEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI 273
K G + A+ + +++ + P+A+T++ FI+ K+ +++EA+ M G P
Sbjct: 409 KAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNH 468
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGD 322
Y ++I+ + +V LL +M G ++ +++++L S +
Sbjct: 469 VYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILTFLCNSAE 517
>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900 [Vitis vinifera]
Length = 900
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 186/390 (47%), Gaps = 19/390 (4%)
Query: 126 SCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQW 184
S G Y +V L KV + + ++ EM + G + + ++ ++ G
Sbjct: 277 SYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNI 336
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIF 243
A +++ FG+ + N L++++CK+GK++ A S+F + + PN T++I
Sbjct: 337 GSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSIL 396
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
I +CK ++D A + +M G V YS++I +C+ L DEM A G
Sbjct: 397 IDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGL 456
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
PNVV YT+++S K G+ A R+ +M G P++ F LI L A+R+ EA
Sbjct: 457 KPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANK 516
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
++ EM E V P+ T+N +I G+ +AF +L+EM + + P+ T+ PL+
Sbjct: 517 LFG-EMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVE-KGLVPDTYTYRPLISG 574
Query: 424 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
TG+ E + ++D+ + L+ ++ ++HG C+ + + A +EM+G +
Sbjct: 575 LCSTGRVSEA-REFMNDLQGEQQ-KLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVA 632
Query: 484 P-------------RYQTCRLILDEVKQKH 500
R Q R I+D +KQ H
Sbjct: 633 MDLVCYSVLIYGILRQQDRRSIIDLLKQMH 662
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 115/450 (25%), Positives = 207/450 (46%), Gaps = 14/450 (3%)
Query: 67 IDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWK--SALGIFRWA 124
+D + K ++GS+ D V + K + PS ++ N LI+ D K A +F
Sbjct: 327 VDGLRKKGNIGSAFDLVNKVKKF-----GVAPSLFVYNALINSMCKDGKLDEAESLFNNM 381
Query: 125 GSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQ 183
G G + Y +++D K ++D L +M++ G T+ + ++ G+
Sbjct: 382 GH-KGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGK 440
Query: 184 WEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNI 242
A FDE+ GL+ N L+ CKEG++ A ++ E+ I PN +TF
Sbjct: 441 LRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTA 500
Query: 243 FIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
I G C NR+ EA EM P ++Y+ +I+ +C++ N + +ELLDEM +G
Sbjct: 501 LISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKG 560
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
P+ TY ++S L +G EA ++ K + F+ L++ + R+ +A+
Sbjct: 561 LVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDAL 620
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLK 422
+ EM GVA D ++ +I +L++M+ + +P+ + ++
Sbjct: 621 DACR-EMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHD-QGLRPDNVLYTTMID 678
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
+ K G L D MV++ L ++ TYT +I+GLC+ + A LL +EM+ +
Sbjct: 679 ANAKAGNLKMAFG-LWDIMVSEGCLP-NVVTYTALINGLCKIGLMDKAELLCREMLASNS 736
Query: 483 TPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
P T LD + + + A ++ V+
Sbjct: 737 LPNQNTYACFLDYLTSEGNIEKAIQLHDVL 766
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 157/342 (45%), Gaps = 5/342 (1%)
Query: 148 RQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN 207
R++D + + M G + + T++ V+ Q+ A+ FDE+ + GL +
Sbjct: 160 RELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYT 219
Query: 208 LLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
++ +LC+ AR V ++S + T+N+FI G CK RV EA +
Sbjct: 220 AVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYK 279
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
G V +Y T++ C+ F E+++EM G P+ + ++ L K G+ A
Sbjct: 280 GLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSA 339
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
+ K+K G P +N LI ++ + ++ EA ++ M G+ P+ T++ +I
Sbjct: 340 FDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFN-NMGHKGLFPNDVTYSILID 398
Query: 387 MFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHH 446
F G + A H L +M ++ K V + L+ K GK S L D+M+ +
Sbjct: 399 SFCKRGKLDVALHFLGKMTEV-GIKATVYPYSSLISGHCKLGKLRAAKS-LFDEMI-ANG 455
Query: 447 LSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
L ++ YT +I G C+ + A+ L+ EM G I+P T
Sbjct: 456 LKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYT 497
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 99/406 (24%), Positives = 192/406 (47%), Gaps = 14/406 (3%)
Query: 85 QSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVD 142
+SL + + N ++P+ + LI + + + +A ++ + G ++ + ++
Sbjct: 445 KSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEM-TGKGISPNTYTFTALIS 503
Query: 143 ILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTF---DELGTFGL 199
L +M + L EM + +++ V+ G + + VR F DE+ GL
Sbjct: 504 GLCHANRMAEANKLFGEMVEWNVIPNEVTYNVL--IEGHCKEGNTVRAFELLDEMVEKGL 561
Query: 200 EKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPP-NAHTFNIFIHGWCKINRVDEAQW 258
+T T L+ LC G+V AR +L+ N F+ +HG+CK R+D+A
Sbjct: 562 VPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALD 621
Query: 259 TIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLA 318
+EM G G ++ YS +I RQ + + +LL +M QG P+ V YTT++ A
Sbjct: 622 ACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANA 681
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDT 378
K+G+ + A + + M G P+ + LI L + + +A + + EM + P+
Sbjct: 682 KAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCR-EMLASNSLPNQ 740
Query: 379 STFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLL 438
+T+ + + G+ EKA + + + LE N T++ L++ K G+ E +++L
Sbjct: 741 NTYACFLDYLTSEGNIEKAIQLHDVL--LEGFLANTVTYNILIRGFCKLGRIQEA-AEVL 797
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
+M++ +S D +Y+ +I+ CR + A L++ M+ + P
Sbjct: 798 VNMIDS-GISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNP 842
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 98/223 (43%), Gaps = 1/223 (0%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G + +Y M+D K + L + M S+G + + T ++ G + A
Sbjct: 665 GLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKA 724
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGW 247
E+ N T LD L EG +E A + L N T+NI I G+
Sbjct: 725 ELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGF 784
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
CK+ R+ EA + M G P ISYSTII YCR+ + + +L + M +G P+
Sbjct: 785 CKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDT 844
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIY 350
V Y ++ +G+ +A + + M G KP+ +N LI+
Sbjct: 845 VAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIH 887
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 107/226 (47%), Gaps = 6/226 (2%)
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKINRVDE 255
GL + ++D K G +++A ++ + + C+P N T+ I+G CKI +D+
Sbjct: 665 GLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLP-NVVTYTALINGLCKIGLMDK 723
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
A+ +EM P +Y+ + + N K +L D + +G N VTY ++
Sbjct: 724 AELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVL-LEGFLANTVTYNILIR 782
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
K G +EA + M G PD ++ +IY R ++EA+ +++ M GV
Sbjct: 783 GFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWE-SMLNRGVN 841
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLL 421
PDT +N +I G KAF + ++M + KPN T++ L+
Sbjct: 842 PDTVAYNFLIYGCCVTGELTKAFELRDDMMR-RGVKPNRATYNSLI 886
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 109/276 (39%), Gaps = 4/276 (1%)
Query: 230 KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFS 289
+ C F++ I + + R + ++ M G P + + S ++ R F
Sbjct: 138 RKCNFSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFR 197
Query: 290 KVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
L DE+ + G P+V YT V+ L + DF A + +M+ G +N I
Sbjct: 198 MALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFI 257
Query: 350 YTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH 409
L + RV EAV + + + G+ D T+ T++ E ++ EM +
Sbjct: 258 RGLCKNQRVWEAVEIKNL-LSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGF 316
Query: 410 CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEW 469
P+ L+ K G L + V K ++ + Y +I+ +C+ K +
Sbjct: 317 V-PSEAAVSNLVDGLRKKGNIGSAFD--LVNKVKKFGVAPSLFVYNALINSMCKDGKLDE 373
Query: 470 AYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
A LF M + P T +++D ++ D A
Sbjct: 374 AESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVA 409
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 36/191 (18%), Positives = 82/191 (42%), Gaps = 4/191 (2%)
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTM 384
+ + + M G P R + ++ L R + + A++++ E+ +G+ PD + +
Sbjct: 163 DGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFD-EIVSSGLRPDVYVYTAV 221
Query: 385 ITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK 444
+ +A V+ M C +V T++ ++ K + E + + ++++
Sbjct: 222 VRSLCELKDFIRAREVIGRMES-SGCDLSVATYNVFIRGLCKNQRVWEAVE--IKNLLSY 278
Query: 445 HHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDA 504
L D+ TY ++ GLC+ + E + EMI P ++D +++K +
Sbjct: 279 KGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGS 338
Query: 505 AEKIEAVMKKL 515
A + +KK
Sbjct: 339 AFDLVNKVKKF 349
>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
Length = 721
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 118/482 (24%), Positives = 212/482 (43%), Gaps = 74/482 (15%)
Query: 98 PSHYLVNKLIHRF--KDDWKSALGIFRWAGSC---PGYEHSSEIYEMMVDIL------GK 146
PS + N L+H + D+ A + + C PGY +Y +++ + GK
Sbjct: 110 PSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYV----VYNILIGGICSSEEPGK 165
Query: 147 VRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETM 206
+A E + G ++ I+ R G G++E A E+ + G +T T
Sbjct: 166 DVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTY 225
Query: 207 NLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKG 265
+ ++ LC KVE A +F E+K + I P+ + + I +CK +++A+ EM+
Sbjct: 226 SKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMER 285
Query: 266 HGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEE 325
GC P V++Y+ +I +Y + SK E+ + M ++GC PN+VTYT ++ L K+G E+
Sbjct: 286 DGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEK 345
Query: 326 AIRITEKMK--------------------------------------------------- 334
A +I + MK
Sbjct: 346 ASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSM 405
Query: 335 -IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
+ G +P+ ++ LI +A ++ EA V+ M E G P+ T++++I
Sbjct: 406 SVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTT-MLECGYDPNVYTYSSLIDRLFKDKR 464
Query: 394 HEKAFHVLEEMNKLEH-CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
+ A VL +M LE+ C PNV + ++ K GKTDE ++ M+ + + ++
Sbjct: 465 LDLALKVLSKM--LENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMV--MMEEKGCNPNVV 520
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
TYT +I G ++ + E L ++M P + T R++++ + D A K+ M
Sbjct: 521 TYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEM 580
Query: 513 KK 514
K+
Sbjct: 581 KQ 582
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 161/352 (45%), Gaps = 30/352 (8%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS-----KGHIVTLNTIAKVMRRFSGAGQWEDAVRTF 191
Y +VD L K Q+ + R LL+ MS H+V I + AG+ ++A F
Sbjct: 382 YGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCK----AGKLDEAQEVF 437
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKI 250
+ G + N T + L+D L K+ +++LA V + L++ PN + I G CK+
Sbjct: 438 TTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKV 497
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
+ DEA + M+ GC+P V++Y+ +I + + K ELL +M ++GC PN VTY
Sbjct: 498 GKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTY 557
Query: 311 TTVMSYLAKSGDFEEAIRITEKMK-------IVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
++++ +G +EA ++ E+MK + G + FN R A
Sbjct: 558 RVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGFN----------REFIASL 607
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFH-PLLK 422
E+ EN P + +I F G E A + EE++ Q H L++
Sbjct: 608 YLSFEISENDSVPVAPVYRVLIDNFIKAGRLEIALELNEELSSFSPFSAANQNIHITLIE 667
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLF 474
+ K D+ +L DM+++ + +++ +I GL R N+ E A L
Sbjct: 668 NLSLAHKADKAF-ELYADMISRGSIP-ELSILVHLIKGLLRVNRWEEALQLL 717
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 150/360 (41%), Gaps = 44/360 (12%)
Query: 194 LGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRV 253
+ T G + T+ +LCK GK A S+ LE K P+ + I G C+ +
Sbjct: 1 MSTMGYRMDEFTLGCFAHSLCKSGKWREALSL-LE-KEEFVPDTVLYTKMISGLCEASLF 58
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
+EA + M+ C P V++Y ++ + + +L M +GC P+ + ++
Sbjct: 59 EEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSL 118
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR-------VQEAVY--- 363
+ +SGD+ A ++ +KM G +P +N LI + + + E Y
Sbjct: 119 VHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEM 178
Query: 364 ---------------------------VYQV--EMPENGVAPDTSTFNTMITMFSHHGHH 394
Y V EM G PDTST++ +I +
Sbjct: 179 LEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKV 238
Query: 395 EKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTY 454
EKAF + +EM K P+V + L+ S K G ++ + D + + + ++ TY
Sbjct: 239 EKAFQLFQEM-KRNGIAPDVYVYTTLIDSFCKAGFIEQARNWF--DEMERDGCAPNVVTY 295
Query: 455 TLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
T +IH ++ K A +++ M+ TP T ++D + + + A +I +MKK
Sbjct: 296 TALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKK 355
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 187/374 (50%), Gaps = 13/374 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKG---HIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
+ +MVD + + AL++ M SKG IVT N++ K + R +G W+ A F
Sbjct: 133 HNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCR---SGMWDKAWEVFK 189
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKIN 251
E+ FG+ + + +L+ C+ G++E A ++ E++ I P+ +F+ I + +
Sbjct: 190 EMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRG 249
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
++D A ++EM+ G P + Y+ +I +CR S + DEM GC P+VVTY
Sbjct: 250 KMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYN 309
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
T+++ L K +A + +M+ G PD F LI+ ++ +A+ ++ M
Sbjct: 310 TLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDT-MLN 368
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
+ PD T+NT+I G +KA + ++M+ E PN T+ L+ S + G+ +
Sbjct: 369 QRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSRE-IFPNHVTYSILIDSHCEKGQVE 427
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCR- 490
+ LD+M+NK L +I TY +I G CR+ ++M+ + ++P T
Sbjct: 428 DAFG-FLDEMINKGILP-NIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNT 485
Query: 491 LILDEVKQKHMYDA 504
LI +K+ M+DA
Sbjct: 486 LIHGYIKEDKMHDA 499
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 106/484 (21%), Positives = 219/484 (45%), Gaps = 23/484 (4%)
Query: 22 RIRFHSSSENCSHIVSSSPIESYCSD------GARLDHHQVLCVDSPRLPDIDV--IISK 73
R+ F S+SE ++ ++ + +YC A + + CV PD+ ++
Sbjct: 84 RLVFSSNSEVNTYTLNIM-VHNYCKALEFDKVDAVISEMEKRCV----FPDVVTHNVMVD 138
Query: 74 VHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYE 131
+ + E +L V ++P N ++ W A +F+ G
Sbjct: 139 ARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDF-GVA 197
Query: 132 HSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRT 190
+ +++ +V ++++ + +EM +G L + + ++ F+ G+ + A+
Sbjct: 198 PDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAY 257
Query: 191 FDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCK 249
E+ FGL + +++ C+ G + A V E+ C P+ T+N ++G CK
Sbjct: 258 LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 317
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
R+ +A+ + EM+ G P + +++T+I YC + K +L D M Q P++VT
Sbjct: 318 ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 377
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM 369
Y T++ + + GD ++A + + M P+ ++ LI + +V++A + + EM
Sbjct: 378 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDA-FGFLDEM 436
Query: 370 PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
G+ P+ T+N++I + G+ K L++M + P++ T++ L+ K K
Sbjct: 437 INKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKM-MVNKVSPDLITYNTLIHGYIKEDK 495
Query: 430 TDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP-RYQT 488
+ L +M+ K + D+ TY ++I+G + A +F++M I P RY
Sbjct: 496 MHDAFKLL--NMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTY 553
Query: 489 CRLI 492
+I
Sbjct: 554 MSMI 557
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 138/307 (44%), Gaps = 37/307 (12%)
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
N +T NI +H +CK D+ I EM+ P V++++ ++ + R + L+
Sbjct: 94 NTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALV 153
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
D M ++G P +VTY +V+ L +SG +++A + ++M G PD R F LI R
Sbjct: 154 DSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRV 213
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE------- 408
++EA+ +Y+ EM G+ PD +F+ +I +F+ G + A L EM
Sbjct: 214 GEIEEALKIYK-EMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVI 272
Query: 409 ---------------------------HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDM 441
C P+V T++ LL K + + LL++M
Sbjct: 273 YTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDA-EGLLNEM 331
Query: 442 VNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHM 501
+ + D+ T+T +IHG C K + A LF M+ + P T ++D + ++
Sbjct: 332 -RERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGD 390
Query: 502 YDAAEKI 508
D A +
Sbjct: 391 LDKANDL 397
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 140/270 (51%), Gaps = 3/270 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +++ L K R++ LL EM +G L T ++ + G+ + A++ FD +
Sbjct: 308 YNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTML 367
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVD 254
L + T N L+D +C++G ++ A ++ ++ S I PN T++I I C+ +V+
Sbjct: 368 NQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVE 427
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
+A + EM G P +++Y++II+ YCR N SK + L +M P+++TY T++
Sbjct: 428 DAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLI 487
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
K +A ++ M+ +PD +N LI VQEA ++++ +M G+
Sbjct: 488 HGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFE-KMCAKGI 546
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
PD T+ +MI G+ ++AF + +EM
Sbjct: 547 EPDRYTYMSMINGHVTAGNSKEAFQLHDEM 576
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 82/179 (45%), Gaps = 8/179 (4%)
Query: 132 HSSEI------YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQW 184
HS EI Y +++D + Q++ L+EM +KG + + T +++ + +G
Sbjct: 402 HSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNV 461
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIF 243
+ ++ + + T N L+ KE K+ A + + K + P+ T+N+
Sbjct: 462 SKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNML 521
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
I+G+ V EA W ++M G P +Y ++I + N + ++L DEM +G
Sbjct: 522 INGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRG 580
>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 634
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 111/425 (26%), Positives = 198/425 (46%), Gaps = 34/425 (8%)
Query: 98 PSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQM-- 153
PS + N L+H + D+ A + + C GY+ +Y +++ + + M
Sbjct: 9 PSPMIFNSLVHAYCRSGDYFYAYKLLKKMVIC-GYQPGYVVYNILIGGICSTEDLPSMEV 67
Query: 154 -----RALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNL 208
RA E + G ++ + R G++E A E+ + G ++ T +
Sbjct: 68 IGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTYSK 127
Query: 209 LLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG 267
++ LC KVE A +F E+K + I P+ +T+ + +CK+ +++A+ EM+ G
Sbjct: 128 VIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDG 187
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
C P V++Y+ +I +Y + S+ E+ + M + GC PN+VTYT ++ K+G+ E+A
Sbjct: 188 CAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKAC 247
Query: 328 RITEKMK--------------IVGS---KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
+I +MK IV S +P+ + L+ L +A +V+EA + + M
Sbjct: 248 QIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLET-MS 306
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH-CKPNVQTFHPLLKSCFKTGK 429
G P+ ++ +I F G ++A V +M L H C PNV T+ L+ FK +
Sbjct: 307 LEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKM--LGHGCSPNVYTYSSLIDKLFKDKR 364
Query: 430 TDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTC 489
D L L + N + ++ YT ++ GLC+ K + AY L M P T
Sbjct: 365 LDLALKVLTKMLENS--CAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTY 422
Query: 490 RLILD 494
++D
Sbjct: 423 TAMID 427
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 178/377 (47%), Gaps = 26/377 (6%)
Query: 158 EEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEG 217
E MSKG I +T +KV+ A + E A + F E+ G+ + T LLD CK G
Sbjct: 112 EMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVG 171
Query: 218 KVELARSVFLELK--SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISY 275
+E AR+ F E++ C PN T+ IH + K ++ A + M +GC P +++Y
Sbjct: 172 LIEQARNWFDEMQQDGC-APNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTY 230
Query: 276 STIIQSYCRQYNFSKVYELLDEMQ-----------------AQGCPPNVVTYTTVMSYLA 318
+ +I +C+ K ++ M+ ++ PNVVTY ++ L
Sbjct: 231 TALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLC 290
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDT 378
K+ +EA + E M + G +P+ ++ LI + ++ EA V+ +M +G +P+
Sbjct: 291 KAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVF-TKMLGHGCSPNV 349
Query: 379 STFNTMITMFSHHGHHEKAFHVLEEMNKLEH-CKPNVQTFHPLLKSCFKTGKTDECLSQL 437
T++++I + A VL +M LE+ C PNV + ++ K GKTDE +
Sbjct: 350 YTYSSLIDKLFKDKRLDLALKVLTKM--LENSCAPNVVIYTEMVDGLCKVGKTDEAYRLM 407
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVK 497
L M+ + ++ TYT +I G +A + + L + M P + T R++++
Sbjct: 408 L--MMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCC 465
Query: 498 QKHMYDAAEKIEAVMKK 514
+ D A K+ MK+
Sbjct: 466 AAGLLDDAHKLLEEMKQ 482
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 156/351 (44%), Gaps = 37/351 (10%)
Query: 82 EVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSC------PGYEHSSE 135
++FQ +K+ N I P Y L+ RF +G+ A + G +
Sbjct: 143 QLFQEMKR----NGITPDVYTYTTLLDRF-----CKVGLIEQARNWFDEMQQDGCAPNVV 193
Query: 136 IYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
Y ++ K R++ + + E M S G + + T ++ AG+ E A + + +
Sbjct: 194 TYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARM 253
Query: 195 GTFGL-----------------EKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPP 235
+ E N T L+D LCK KV+ AR + + L+ C P
Sbjct: 254 KNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGC-EP 312
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
N ++ I G+CK+ ++DEAQ +M GHGC P V +YS++I + ++L
Sbjct: 313 NQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVL 372
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
+M C PNVV YT ++ L K G +EA R+ M+ G P+ + +I G+A
Sbjct: 373 TKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKA 432
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNK 406
RV + + Q+ M G AP+ T+ +I G + A +LEEM +
Sbjct: 433 GRVDRCLELLQL-MTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQ 482
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 164/356 (46%), Gaps = 25/356 (7%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +VD L K ++ + R LLE MS +G ++ F G+ ++A F ++
Sbjct: 282 YGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKML 341
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVD 254
G N T + L+D L K+ +++LA V + L++ PN + + G CK+ + D
Sbjct: 342 GHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTD 401
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA + M+ GC+P V++Y+ +I + + + ELL M ++GC PN +TY ++
Sbjct: 402 EAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLI 461
Query: 315 SYLAKSGDFEEAIRITEKMKI------VG--SKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
++ +G ++A ++ E+MK +G K F + + +LG +
Sbjct: 462 NHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGFSHEFVASLGLLA---------- 511
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
E+ E+G P + +I F G E A + EE++ N T+ L++S
Sbjct: 512 -ELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSFSAAYQN--TYVSLIESLTL 568
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
K D+ +L DM + + +++ +I GL R K E A L + DI
Sbjct: 569 ACKVDKAF-KLYSDMTRRGFVP-ELSMLVCLIKGLLRVGKWEEALQLSDSICQMDI 622
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 20/345 (5%)
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIH 245
A R ++E+ G+ N + LC GK E A +V E+ S P++ T++ I
Sbjct: 71 AERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTYSKVIG 130
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
C ++V++A QEMK +G P V +Y+T++ +C+ + DEMQ GC P
Sbjct: 131 YLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAP 190
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
NVVTYT ++ K+ A I E M G P+ + LI +A ++A +Y
Sbjct: 191 NVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIY 250
Query: 366 ------QVEMPENGV----------APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH 409
+V++P+ + P+ T+ ++ ++A +LE M+ LE
Sbjct: 251 ARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMS-LEG 309
Query: 410 CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEW 469
C+PN + L+ K GK DE ++ M+ H S ++ TY+ +I L + + +
Sbjct: 310 CEPNQIIYDALIDGFCKVGKLDEA-QEVFTKMLG-HGCSPNVYTYSSLIDKLFKDKRLDL 367
Query: 470 AYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
A + +M+ + P ++D + + D A ++ +M++
Sbjct: 368 ALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEE 412
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 118/256 (46%), Gaps = 45/256 (17%)
Query: 263 MKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKS-- 320
M GC+P + +++++ +YCR ++ Y+LL +M G P V Y ++ + +
Sbjct: 2 MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTED 61
Query: 321 ---------------------------------------GDFEEAIRITEKMKIVGSKPD 341
G FE+A + +M G PD
Sbjct: 62 LPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPD 121
Query: 342 SRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVL 401
S ++ +I L AS+V++A ++Q EM NG+ PD T+ T++ F G E+A +
Sbjct: 122 SSTYSKVIGYLCNASKVEKAFQLFQ-EMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWF 180
Query: 402 EEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGL 461
+EM + + C PNV T+ L+ + KT K +++ + M++ + +I TYT +I G
Sbjct: 181 DEMQQ-DGCAPNVVTYTALIHAYLKTRKLSRA-NEIFEMMLSNGCVP-NIVTYTALIDGH 237
Query: 462 CRANKCEWAYLLFKEM 477
C+A + E A ++ M
Sbjct: 238 CKAGETEKACQIYARM 253
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 104/256 (40%), Gaps = 43/256 (16%)
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI-------- 349
M +GC P+ + + +++ +SGD+ A ++ +KM I G +P +N LI
Sbjct: 2 MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTED 61
Query: 350 ----YTLGRASRVQ----------------------------EAVYVYQVEMPENGVAPD 377
+G A R E Y EM G PD
Sbjct: 62 LPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPD 121
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
+ST++ +I + EKAF + +EM K P+V T+ LL K G ++ +
Sbjct: 122 SSTYSKVIGYLCNASKVEKAFQLFQEM-KRNGITPDVYTYTTLLDRFCKVGLIEQARNWF 180
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVK 497
D + + + ++ TYT +IH + K A +F+ M+ + P T ++D
Sbjct: 181 --DEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHC 238
Query: 498 QKHMYDAAEKIEAVMK 513
+ + A +I A MK
Sbjct: 239 KAGETEKACQIYARMK 254
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 110/308 (35%), Gaps = 73/308 (23%)
Query: 126 SCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLN--TIAKVMRRFSGAGQ 183
S G E + IY+ ++D KV ++D+ + + +M GH + N T + ++ + +
Sbjct: 306 SLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKML-GHGCSPNVYTYSSLIDKLFKDKR 364
Query: 184 WEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFL--ELKSCIPPNAHTFN 241
+ A++ ++ N ++D LCK GK + A + L E K C P N T+
Sbjct: 365 LDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYP-NVVTYT 423
Query: 242 IFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCR----------------- 284
I G+ K RVD +Q M GC P I+Y +I C
Sbjct: 424 AMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQT 483
Query: 285 ----------------QYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
+ F LL E+ G P + Y ++ K+G E A+
Sbjct: 484 YWPKHIGMYRKVIEGFSHEFVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALE 543
Query: 329 ITEK----------------------------------MKIVGSKPDSRFFNCLIYTLGR 354
+ E+ M G P+ CLI L R
Sbjct: 544 LHEELSSFSAAYQNTYVSLIESLTLACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLR 603
Query: 355 ASRVQEAV 362
+ +EA+
Sbjct: 604 VGKWEEAL 611
>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 186/374 (49%), Gaps = 10/374 (2%)
Query: 113 DWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIA 172
D + L IF G GY H+ ++Y + ++ LG + + + LL +M + IV +I
Sbjct: 91 DVPTLLEIFERVGGQKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIF 150
Query: 173 KV-MRRFSGAGQWEDAVRTF-DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK 230
+ M+ + AGQ A+R D + E ++ +L+L+ L ++A +VF ++
Sbjct: 151 MIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDML 210
Query: 231 S-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFS 289
S + P TF I + C N VD A +++M HGC P I Y T+I + ++ S
Sbjct: 211 SKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVS 270
Query: 290 KVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
+ +LL+EM GC P+V T+ V+ L K +A ++ ++M + G PD+ + L+
Sbjct: 271 EALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLL 330
Query: 350 YTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH 409
+ L R ++ EA + +++P P+ + NT+I + G ++A L E
Sbjct: 331 HGLCRIGKLNEARKIL-IKIP----CPNNAILNTLINGYVMSGQLKEAQSFLNETMINFG 385
Query: 410 CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEW 469
+P++ T++ L+ K G ++ L + +++ ++ TY ++++GLC+A E
Sbjct: 386 FQPDIFTYNILMHGLCKEGSLS--FARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEE 443
Query: 470 AYLLFKEMIGHDIT 483
A L+ EM +T
Sbjct: 444 AGLVLHEMSARGLT 457
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 178/359 (49%), Gaps = 11/359 (3%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAV 188
G+ + Y ++ L ++ ++++ R +L ++ + LNT+ + + +GQ ++A
Sbjct: 318 GFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTL---INGYVMSGQLKEAQ 374
Query: 189 RTFDE-LGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIH 245
+E + FG + + T N+L+ LCKEG + AR + E+ + C PN T+ I ++
Sbjct: 375 SFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGC-EPNVITYAILVN 433
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G CK ++EA + EM G + Y+ +I + CR+ LL EM +GC P
Sbjct: 434 GLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKP 493
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
++ TY +++ L K +EA R+ M + G+ ++ +N LI+ L R Q+A+ +
Sbjct: 494 DLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLV 553
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
+M G D T+N +I F G+ EK + E+M ++ + + + ++
Sbjct: 554 N-DMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQM-IMDGLGADTISCNIMINGLC 611
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
K GK D + L D +N+ + DI TY V++GLC+ + + A LF + + P
Sbjct: 612 KVGKVDNAF-EFLRDAINRGFVP-DIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRP 668
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 118/485 (24%), Positives = 209/485 (43%), Gaps = 53/485 (10%)
Query: 51 LDHHQV-LCVDSPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHY---LVNKL 106
LD V LC P D+++ + G+ +V ++ D + + P+ + +V K
Sbjct: 171 LDMRAVYLC--EPTFKSYDLVLEILVTGNCP-QVATNVFYDMLSKGVSPTVFTFGIVMKA 227
Query: 107 IHRFKDDWKSALGIFRWA---GSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SK 162
+ F ++ SA + R G P +S +Y+ ++ L + Q+ + LLEEM
Sbjct: 228 LCMF-NEVDSACSLLRDMTKHGCVP----NSIVYQTLIHALSQKNQVSEALKLLEEMFVM 282
Query: 163 GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELA 222
G + + T V+ + DA + D + G + T LL LC+ GK+ A
Sbjct: 283 GCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEA 342
Query: 223 RSVFL---------------------ELKSC------------IPPNAHTFNIFIHGWCK 249
R + + +LK P+ T+NI +HG CK
Sbjct: 343 RKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCK 402
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
+ A+ + EM GC P VI+Y+ ++ C+ + +L EM A+G N V
Sbjct: 403 EGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVI 462
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM 369
Y ++ L + A+ + +M G KPD +N LIY L + R+ EA ++ M
Sbjct: 463 YNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFH-NM 521
Query: 370 PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
+G + T+NT+I G +KA ++ +M C + T++ L+K+ K G
Sbjct: 522 LLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDM-LFRGCTLDKITYNGLIKAFCKVGN 580
Query: 430 TDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTC 489
++ L +L + M+ L D + ++I+GLC+ K + A+ ++ I P T
Sbjct: 581 IEKGL-ELYEQMI-MDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTY 638
Query: 490 RLILD 494
+L+
Sbjct: 639 NSVLN 643
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 176/368 (47%), Gaps = 11/368 (2%)
Query: 98 PSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRA 155
P++ ++N LI+ + K A G++ Y +++ L K + R
Sbjct: 352 PNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARD 411
Query: 156 LLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLC 214
L+ EMS+ G + T A ++ AG E+A E+ GL N+ N L+ LC
Sbjct: 412 LVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALC 471
Query: 215 KEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCV 272
++ KV +A ++ E+ K C P+ T+N I+G CK++R+DEA M G
Sbjct: 472 RKEKVHVALNLLSEMCTKGC-KPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANN 530
Query: 273 ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEK 332
++Y+T+I + R+ F K L+++M +GC + +TY ++ K G+ E+ + + E+
Sbjct: 531 VTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQ 590
Query: 333 MKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
M + G D+ N +I L + +V A + + + G PD T+N+++ G
Sbjct: 591 MIMDGLGADTISCNIMINGLCKVGKVDNA-FEFLRDAINRGFVPDIVTYNSVLNGLCKVG 649
Query: 393 HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKH---HLSL 449
++A ++ + + ++E +P+ T++ + K G ++ S + N +L+
Sbjct: 650 RIKEALNLFDRL-QVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTW 708
Query: 450 DITTYTLV 457
++ YTL+
Sbjct: 709 NVLVYTLL 716
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 108/246 (43%), Gaps = 7/246 (2%)
Query: 264 KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF 323
KG+ CH + Y I F + +LL +M+ +G + +M + K+G
Sbjct: 106 KGY-CHTFDVYY-VFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQP 163
Query: 324 EEAIRITEKMKIVG-SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFN 382
+AIR+ M+ V +P + ++ ++ L + Q A V+ +M GV+P TF
Sbjct: 164 GQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFY-DMLSKGVSPTVFTFG 222
Query: 383 TMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMV 442
++ + A +L +M K C PN + L+ + + + E L +LL++M
Sbjct: 223 IVMKALCMFNEVDSACSLLRDMTK-HGCVPNSIVYQTLIHALSQKNQVSEAL-KLLEEMF 280
Query: 443 NKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMY 502
+ D+ T+ VIHGLC+ NK A L M+ P T +L + +
Sbjct: 281 VMGCMP-DVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKL 339
Query: 503 DAAEKI 508
+ A KI
Sbjct: 340 NEARKI 345
>gi|356508736|ref|XP_003523110.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 680
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 154/303 (50%), Gaps = 4/303 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTI-AKVMRRFSGAGQWEDA 187
G + + Y +++D+ + + R +L+EM ++ + + ++++ + G+W+ +
Sbjct: 341 GVKPDEQTYSLLIDVYAHAGRWESARIVLKEMEASNVQPNSYVFSRILANYRDKGEWQKS 400
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHG 246
+ ++ + G++ + N+++DT K ++ A + F L IPP+ T+N I
Sbjct: 401 FQVLKDMKSSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIPPDIVTWNTLIDC 460
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
CK R D A+ EM+ G PC+ +Y+ +I S Q + +V L +MQ+QG PN
Sbjct: 461 HCKSGRHDMAEELFSEMQQRGYSPCITTYNIMINSMGEQQRWEQVTAFLSKMQSQGLQPN 520
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
+TYTT++ KSG F +AI E +K G KP S +N LI + + AV ++
Sbjct: 521 SITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQRGLSELAVNAFR 580
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
+ M G+ P N++I F +AF VL+ M K + +P+V T+ L+K+ +
Sbjct: 581 L-MTTEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYM-KENNIEPDVVTYTTLMKALIR 638
Query: 427 TGK 429
K
Sbjct: 639 VEK 641
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 158/333 (47%), Gaps = 7/333 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQ--MRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWE 185
GY+ Y ++ L + ++D ++ L E+ I + + + ++ FS AG
Sbjct: 199 GYQPDFVNYSSIIQYLTRSNKIDSPILQKLYAEIETDKIEIDGHLMNDIIVGFSKAGDPT 258
Query: 186 DAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFI 244
A+R + GL T+ ++ L G+ A ++F E++ + + P +N +
Sbjct: 259 RAMRFLAMAQSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENGLEPRTRAYNALL 318
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
G+ + + +A++ + EM+ G P +YS +I Y + +L EM+A
Sbjct: 319 KGYVRTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDVYAHAGRWESARIVLKEMEASNVQ 378
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
PN ++ +++ G+++++ ++ + MK G +PD F+N +I T G+ + + A+
Sbjct: 379 PNSYVFSRILANYRDKGEWQKSFQVLKDMKSSGVQPDRHFYNVMIDTFGKYNCLDHAMAT 438
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
++ M G+ PD T+NT+I G H+ A + EM + + P + T++ ++ S
Sbjct: 439 FE-RMLSEGIPPDIVTWNTLIDCHCKSGRHDMAEELFSEMQQRGYS-PCITTYNIMINSM 496
Query: 425 FKTGKTDECLSQLLDDMVNKHHLSLDITTYTLV 457
+ + ++ ++ L M ++ IT TLV
Sbjct: 497 GEQQRWEQ-VTAFLSKMQSQGLQPNSITYTTLV 528
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/383 (19%), Positives = 179/383 (46%), Gaps = 14/383 (3%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
+Y ++++ LG+ ++ + A L +S+ ++T T ++ + G E A+ ++
Sbjct: 141 LYSILINALGRSEKLYE--AFL--LSQRQVLTPLTYNALIGACARNGDVEKALNLMSKMR 196
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVE--LARSVFLELKS-CIPPNAHTFNIFIHGWCKINR 252
G + + + ++ L + K++ + + ++ E+++ I + H N I G+ K
Sbjct: 197 RDGYQPDFVNYSSIIQYLTRSNKIDSPILQKLYAEIETDKIEIDGHLMNDIIVGFSKAGD 256
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
A + + +G +P + +I + + L +E++ G P Y
Sbjct: 257 PTRAMRFLAMAQSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENGLEPRTRAYNA 316
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN 372
++ ++G ++A + +M+ G KPD + ++ LI A R + A V + EM +
Sbjct: 317 LLKGYVRTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDVYAHAGRWESARIVLK-EMEAS 375
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
V P++ F+ ++ + G +K+F VL++M K +P+ ++ ++ + K D
Sbjct: 376 NVQPNSYVFSRILANYRDKGEWQKSFQVLKDM-KSSGVQPDRHFYNVMIDTFGKYNCLDH 434
Query: 433 CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLI 492
++ + M+++ + DI T+ +I C++ + + A LF EM +P T ++
Sbjct: 435 AMATF-ERMLSEG-IPPDIVTWNTLIDCHCKSGRHDMAEELFSEMQQRGYSPCITTYNIM 492
Query: 493 LDEVKQKHMYDAAEKIEAVMKKL 515
++ + ++ + E++ A + K+
Sbjct: 493 INSMGEQQRW---EQVTAFLSKM 512
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 125/296 (42%), Gaps = 41/296 (13%)
Query: 87 LKQDHVCNAIQPSHYLVNKLIHRFKD--DWKSALGIFRWAGSCPGYEHSSEIYEMMVDIL 144
LK+ N +QP+ Y+ ++++ ++D +W+ + + + S G + Y +M+D
Sbjct: 369 LKEMEASN-VQPNSYVFSRILANYRDKGEWQKSFQVLKDMKSS-GVQPDRHFYNVMIDTF 426
Query: 145 GKVRQMDQMRALLEEM-SKG---HIVTLNTIA---------------------------- 172
GK +D A E M S+G IVT NT+
Sbjct: 427 GKYNCLDHAMATFERMLSEGIPPDIVTWNTLIDCHCKSGRHDMAEELFSEMQQRGYSPCI 486
Query: 173 ---KVMRRFSGAGQ-WEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE 228
+M G Q WE ++ + GL+ N+ T L+D K G+ A
Sbjct: 487 TTYNIMINSMGEQQRWEQVTAFLSKMQSQGLQPNSITYTTLVDVYGKSGRFSDAIECLEV 546
Query: 229 LKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYN 287
LKS P + +N I+ + + + A + M G P +++ +++I ++
Sbjct: 547 LKSTGFKPTSTMYNALINAYAQRGLSELAVNAFRLMTTEGLTPSLLALNSLINAFGEDRR 606
Query: 288 FSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSR 343
++ + +L M+ P+VVTYTT+M L + F++ + E+M G PD +
Sbjct: 607 DAEAFAVLQYMKENNIEPDVVTYTTLMKALIRVEKFQKVPAVYEEMVASGCTPDRK 662
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 106/240 (44%), Gaps = 11/240 (4%)
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
C + YS +I + R K+YE Q Q P +TY ++ A++GD E+A+
Sbjct: 135 CFSYELLYSILINALGRS---EKLYEAFLLSQRQVLTP--LTYNALIGACARNGDVEKAL 189
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY--VYQVEMPENGVAPDTSTFNTMI 385
+ KM+ G +PD ++ +I L R++++ + +Y E+ + + D N +I
Sbjct: 190 NLMSKMRRDGYQPDFVNYSSIIQYLTRSNKIDSPILQKLY-AEIETDKIEIDGHLMNDII 248
Query: 386 TMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKH 445
FS G +A L M + P T ++ + +G+T E ++ L + + ++
Sbjct: 249 VGFSKAGDPTRAMRFL-AMAQSNGLNPKPSTLVAVILALGNSGRTHE--AEALFEEIREN 305
Query: 446 HLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
L Y ++ G R + A + EM + P QT L++D +++A
Sbjct: 306 GLEPRTRAYNALLKGYVRTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDVYAHAGRWESA 365
>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/403 (24%), Positives = 187/403 (46%), Gaps = 44/403 (10%)
Query: 147 VRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETM 206
+ + ++ +LE+ K + N V+ F A + E A D + G + T
Sbjct: 26 IDKATRVMGILEKHGKPDVFAYNA---VISGFCKANRIESAKTVLDRMKRKGFSPDVVTH 82
Query: 207 NLLLDTLCKEGKVELARSVFLEL---KSCIP----------------------------- 234
N+++ T C +GK++LA VF EL +C P
Sbjct: 83 NIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEML 142
Query: 235 -----PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFS 289
P+ T+N+ G CK +VD A ++ + GC P VI+Y+ ++++ Q +
Sbjct: 143 SRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWD 202
Query: 290 KVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
+ + + E+ ++GC PNVVTY+ ++S L + G EE++ + + MK G PD+ ++ LI
Sbjct: 203 EGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLI 262
Query: 350 YTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH 409
R ++ A+ M +G PD +NT++ +G+ + A + +++++
Sbjct: 263 AAFCREGKLDMAIEFLDC-MICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEV-G 320
Query: 410 CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEW 469
C PNV +++ +L + + +G L ++ M++K + D+ TY +I LCR +
Sbjct: 321 CPPNVSSYNTMLSALWSSGDRYRALG-MISQMLSK-GIDPDVITYNSLISCLCRDGMVDE 378
Query: 470 AYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
A L +M+ P + + +L + + H D A ++ A M
Sbjct: 379 AIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAM 421
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 79/181 (43%), Gaps = 4/181 (2%)
Query: 165 IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARS 224
IV NTI M G + AV F +L G N + N +L L G A
Sbjct: 290 IVNYNTI---MAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALG 346
Query: 225 VFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYC 283
+ ++ S I P+ T+N I C+ VDEA + +M P ++SY T++ C
Sbjct: 347 MISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLC 406
Query: 284 RQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSR 343
+ + E+L M GC PN TYT ++ + SG +A+ + + I+ + +
Sbjct: 407 KAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQAMELANSLYIMNAISEDS 466
Query: 344 F 344
F
Sbjct: 467 F 467
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 113/255 (44%), Gaps = 8/255 (3%)
Query: 129 GYEHSSEIYEMMVDIL---GKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWE 185
G E + Y +++ L GK+ + + +++E KG ++ F G+ +
Sbjct: 215 GCEPNVVTYSILISSLCRDGKIEESVNLVKVMKE--KGLTPDAYCYDPLIAAFCREGKLD 272
Query: 186 DAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFI 244
A+ D + G + N ++ LCK G + A +F +L PPN ++N +
Sbjct: 273 MAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTML 332
Query: 245 HG-WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
W +R A I +M G P VI+Y+++I CR + LL +M +
Sbjct: 333 SALWSSGDRY-RALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRF 391
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
PN+V+Y TV+ L K+ ++AI + M G +P+ + LI +G + +A+
Sbjct: 392 QPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQAME 451
Query: 364 VYQVEMPENGVAPDT 378
+ N ++ D+
Sbjct: 452 LANSLYIMNAISEDS 466
>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
Length = 913
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 193/409 (47%), Gaps = 40/409 (9%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
+Y+ ++ L + + LL EM G +NT V+R G G+ +A R D +
Sbjct: 212 LYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRM 271
Query: 195 GTFGLEKNTETMNLLLDTLCK-------------------------------EGKVELAR 223
T G T LL LC+ EGK+ A
Sbjct: 272 MTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEAT 331
Query: 224 SVF--LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQS 281
++ + LK C P+AHT++I +HG CK+ R+ A ++EM+ G P V++Y+ ++ S
Sbjct: 332 ELYETMGLKGC-QPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHS 390
Query: 282 YCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPD 341
+C+ + LL+EM A+G N Y ++ L K G +EA+ + ++M+ G PD
Sbjct: 391 FCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPD 450
Query: 342 SRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVL 401
+N +IY L +++EA ++++ + E GV + T+NT+I G + A +
Sbjct: 451 ICSYNTIIYHLCNNEQMEEAEHMFE-NLLEEGVVANGITYNTIIHALLRDGRWQDAVRLA 509
Query: 402 EEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGL 461
+EM L C +V +++ L+K+ K G D L LL++M K + + +Y ++I L
Sbjct: 510 KEM-ILHGCSLDVVSYNGLIKAMCKDGNVDRSLV-LLEEMAEK-GIKPNNVSYNILISEL 566
Query: 462 CRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIE 509
C+ + A L K+M+ + P T +++ + K M+ A +E
Sbjct: 567 CKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLE 615
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 193/381 (50%), Gaps = 9/381 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGT 196
Y ++ L +VRQ D+ RA+L + + ++V NT V+ G+ +A ++ +G
Sbjct: 283 YGFLLQGLCRVRQADEARAMLGRVPELNVVLFNT---VIGGCLAEGKLAEATELYETMGL 339
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDE 255
G + + T ++L+ LCK G++ A + E+ K PN T+ I +H +CK D+
Sbjct: 340 KGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDD 399
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
+ ++EM G Y+ +I + C+ + L+ EM++QGC P++ +Y T++
Sbjct: 400 TRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIY 459
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
+L + EEA + E + G + +N +I+ L R R Q+AV + + EM +G +
Sbjct: 460 HLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAK-EMILHGCS 518
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS 435
D ++N +I G+ +++ +LEEM + + KPN +++ L+ K + + L
Sbjct: 519 LDVVSYNGLIKAMCKDGNVDRSLVLLEEMAE-KGIKPNNVSYNILISELCKERRVRDAL- 576
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD- 494
+L M+N+ L+ DI TY +I+GLC+ A L +++ ++ P T +++
Sbjct: 577 ELSKQMLNQG-LAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISW 635
Query: 495 EVKQKHMYDAAEKIEAVMKKL 515
K + + DAA + M +
Sbjct: 636 HCKVRLLDDAAMLLNRAMAAV 656
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 160/314 (50%), Gaps = 12/314 (3%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G + + Y +++ L K+ ++ LL EM KG + T V+ F G W+D
Sbjct: 341 GCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDT 400
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHG 246
+E+ GL N++ N ++ LCK+G+++ A + E++S P+ ++N I+
Sbjct: 401 RALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYH 460
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C +++EA+ + + G I+Y+TII + R + L EM GC +
Sbjct: 461 LCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLD 520
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
VV+Y ++ + K G+ + ++ + E+M G KP++ +N LI L + RV++A+ + +
Sbjct: 521 VVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSK 580
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
+M G+APD T+NT+I G A ++LE+++ E+ P++ T++ L+
Sbjct: 581 -QMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHN-ENVHPDIITYNILI----- 633
Query: 427 TGKTDECLSQLLDD 440
+ C +LLDD
Sbjct: 634 ---SWHCKVRLLDD 644
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 140/300 (46%), Gaps = 11/300 (3%)
Query: 187 AVRTFDELGT-FGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIF 243
A+ D+L FG++ + + N++L L + A +++ + + +PP TF +
Sbjct: 122 ALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVA 181
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
C++ R DEA ++ M HGC P + Y T+I + C Q ++ LL+EM GC
Sbjct: 182 ARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGC 241
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
+V T+ V+ + G EA R+ ++M G P + L+ L R + EA
Sbjct: 242 AADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARA 301
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
+ +PE V FNT+I G +A + E M L+ C+P+ T+ L+
Sbjct: 302 MLG-RVPELNVV----LFNTVIGGCLAEGKLAEATELYETMG-LKGCQPDAHTYSILMHG 355
Query: 424 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
K G+ + +LL +M K + ++ TYT+V+H C+ + L +EM +T
Sbjct: 356 LCKLGRIGSAV-RLLREM-EKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLT 413
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 78/185 (42%), Gaps = 39/185 (21%)
Query: 156 LLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRT------------------------- 190
LLEE + +T NTI + R G+W+DAVR
Sbjct: 477 LLEEGVVANGITYNTIIHALLR---DGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCK 533
Query: 191 ----------FDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHT 239
+E+ G++ N + N+L+ LCKE +V A + + L + P+ T
Sbjct: 534 DGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVT 593
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+N I+G CK+ + A ++++ HP +I+Y+ +I +C+ LL+
Sbjct: 594 YNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAM 653
Query: 300 AQGCP 304
A CP
Sbjct: 654 AAVCP 658
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 180/357 (50%), Gaps = 14/357 (3%)
Query: 145 GKVRQMDQMRAL--LEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEK 201
G VR+ D AL +E MS A ++++ +G+ +A R E
Sbjct: 68 GLVRRGDLEEALRLVESMSGLEPSAAPGPCAALIKKLCASGRTAEARRVL-----AACEP 122
Query: 202 NTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQ 261
+ N ++ C G+++ AR + ++ + P+++T+N I G C R A +
Sbjct: 123 DVMAYNAMVAGYCVTGQLDAARRLVADMP--MEPDSYTYNTLIRGLCGRGRTGNALVVLD 180
Query: 262 EMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSG 321
+M GC P V++Y+ ++++ C++ + + +LLDEM+A+GC P+++TY V++ + + G
Sbjct: 181 DMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEG 240
Query: 322 DFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTF 381
++AI + + G +P++ +N ++ L A R ++A + EM + G P+ TF
Sbjct: 241 RVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKL-MAEMSQKGYPPNVVTF 299
Query: 382 NTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDM 441
N +I+ G E A VL+++ K C PN +++P+L + K K D ++ ++ M
Sbjct: 300 NMLISFLCRRGLVEPAMEVLDQIPKY-GCTPNSLSYNPILHAFCKQKKMDRAMA-FVELM 357
Query: 442 VNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQ 498
V++ DI +Y ++ LCR + + A L ++ TP + ++D + +
Sbjct: 358 VSRGCYP-DIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTK 413
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/439 (24%), Positives = 202/439 (46%), Gaps = 36/439 (8%)
Query: 41 IESYCSDGARLDHHQVLCVDSPRLPD-------IDVIISKVHVGSSEDEVFQSLKQDHVC 93
+ YC G +LD + L D P PD I + + G++ + L++ V
Sbjct: 131 VAGYCVTG-QLDAARRLVADMPMEPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVP 189
Query: 94 NAIQPSHYLVNKLIHRFKDDWKSALGIF---RWAGSCPGYEHSSEIYEMMVDILGKVRQM 150
+ + Y + + +K A+ + R G P Y ++V+ + + ++
Sbjct: 190 DVVT---YTILLEATCKRSGYKQAMKLLDEMRAKGCAPDII----TYNVVVNGICQEGRV 242
Query: 151 DQMRALLEEMSKGHIVTLNTIAK--VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNL 208
D L+ + H NT++ V++ A +WEDA + E+ G N T N+
Sbjct: 243 DDAIEFLKSLPS-HGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNM 301
Query: 209 LLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG 267
L+ LC+ G VE A V ++ K PN+ ++N +H +CK ++D A ++ M G
Sbjct: 302 LISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRG 361
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
C+P ++SY+T++ + CR ELL +++ +GC P +++Y TV+ L K+G +EA+
Sbjct: 362 CYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEAL 421
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITM 387
+ +M G +PD ++ + L R R++EA+ + ++ + G+ P+T +N ++
Sbjct: 422 ELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAF-CKVQDMGIRPNTVLYNAILLG 480
Query: 388 FSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHL 447
A + M C PN T+ L++ G E +LL ++ ++ +
Sbjct: 481 LCKRRETHNAIDLFIYMIS-NGCMPNESTYTILIEGLTYEGLVKEA-RELLGELCSRGVV 538
Query: 448 S-----------LDITTYT 455
S LD TT+T
Sbjct: 539 SKGLINKAAIRLLDGTTHT 557
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/452 (23%), Positives = 203/452 (44%), Gaps = 19/452 (4%)
Query: 41 IESYCSDGARLDHHQVLCVDSPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSH 100
I+ C+ G + +VL P + + +++ V D + L D ++P
Sbjct: 101 IKKLCASGRTAEARRVLAACEPDVMAYNAMVAGYCVTGQLDAA-RRLVADM---PMEPDS 156
Query: 101 YLVNKLIHRFKDDWKSA-----LGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRA 155
Y N LI ++ L G P Y ++++ K Q
Sbjct: 157 YTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVP----DVVTYTILLEATCKRSGYKQAMK 212
Query: 156 LLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLC 214
LL+EM +KG + T V+ G+ +DA+ L + G E NT + N++L LC
Sbjct: 213 LLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLC 272
Query: 215 KEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI 273
+ E A + E+ + PPN TFN+ I C+ V+ A + ++ +GC P +
Sbjct: 273 TAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSL 332
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
SY+ I+ ++C+Q + ++ M ++GC P++V+Y T+++ L + G+ + A+ + ++
Sbjct: 333 SYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQL 392
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
K G P +N +I L +A + +EA+ + EM G+ PD T++T+ +
Sbjct: 393 KDKGCTPVLISYNTVIDGLTKAGKTKEALELLN-EMVTKGLQPDIITYSTISSGLCREDR 451
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
E+A ++ + +PN ++ +L K +T + L M++ + + +T
Sbjct: 452 IEEAIRAFCKVQDM-GIRPNTVLYNAILLGLCKRRETHNAI-DLFIYMISNGCMP-NEST 508
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
YT++I GL + A L E+ + +
Sbjct: 509 YTILIEGLTYEGLVKEARELLGELCSRGVVSK 540
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/380 (22%), Positives = 173/380 (45%), Gaps = 6/380 (1%)
Query: 131 EHSSEIYEMMV-DILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVR 189
E S Y ++ + G+ R + + L + + +G + + T ++ ++ A++
Sbjct: 153 EPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMK 212
Query: 190 TFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWC 248
DE+ G + T N++++ +C+EG+V+ A L S PN ++NI + G C
Sbjct: 213 LLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLC 272
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
R ++A+ + EM G P V++++ +I CR+ E+LD++ GC PN +
Sbjct: 273 TAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSL 332
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
+Y ++ K + A+ E M G PD +N L+ L R V AV + +
Sbjct: 333 SYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLH-Q 391
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
+ + G P ++NT+I + G ++A +L EM + +P++ T+ + +
Sbjct: 392 LKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVT-KGLQPDIITYSTISSGLCRED 450
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ +E + V + + Y ++ GLC+ + A LF MI + P T
Sbjct: 451 RIEEAIRAFCK--VQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNEST 508
Query: 489 CRLILDEVKQKHMYDAAEKI 508
++++ + + + A ++
Sbjct: 509 YTILIEGLTYEGLVKEAREL 528
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 108/242 (44%), Gaps = 37/242 (15%)
Query: 305 PNVVTYTTV----MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNC--LIYTLGRASRV 358
PN V + V + L + GD EEA+R+ E M G +P + C LI L + R
Sbjct: 53 PNAVPHRAVSNDRLRGLVRRGDLEEALRLVESMS--GLEPSAAPGPCAALIKKLCASGRT 110
Query: 359 QEA----------VYVY-----------QVEMPENGVA-----PDTSTFNTMITMFSHHG 392
EA V Y Q++ VA PD+ T+NT+I G
Sbjct: 111 AEARRVLAACEPDVMAYNAMVAGYCVTGQLDAARRLVADMPMEPDSYTYNTLIRGLCGRG 170
Query: 393 HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
A VL++M + C P+V T+ LL++ K + + +LLD+M K + DI
Sbjct: 171 RTGNALVVLDDMLR-RGCVPDVVTYTILLEATCKRSGYKQAM-KLLDEMRAKG-CAPDII 227
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
TY +V++G+C+ + + A K + H P + ++L + ++ AEK+ A M
Sbjct: 228 TYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEM 287
Query: 513 KK 514
+
Sbjct: 288 SQ 289
>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
Length = 817
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 126/520 (24%), Positives = 221/520 (42%), Gaps = 57/520 (10%)
Query: 35 IVSSSPIESYCSDGARLDHHQVLCVDSPRL---PDI---DVIISKV----HVGSSEDEVF 84
I+++ +E +C + +L +P L PD+ +++ + G ++D +
Sbjct: 150 IIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLR 209
Query: 85 QSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVD 142
+ VC+ P+ N +I F + D A +F+ G Y +V
Sbjct: 210 MMAEGGAVCS---PNVVAYNTVIDGFFKEGDVNKACDLFKEMVQ-RGIPPDLVTYNSVVH 265
Query: 143 ILGKVRQMDQMRALLEEMSKGHIVTLN-TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEK 201
L K R MD+ A L +M ++ N T ++ +S GQW++AVR F E+ +
Sbjct: 266 ALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILP 325
Query: 202 NTETMNLLLDTLCKEGKVELARSVF----------------------------------- 226
+ T+++L+ +LCK GK++ AR VF
Sbjct: 326 DVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLF 385
Query: 227 -LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQ 285
L L I P+ +TFN+ I + +D+A EM+ HG P V++Y T+I + CR
Sbjct: 386 DLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRI 445
Query: 286 YNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFF 345
E ++M QG P+ Y ++ G +A + ++ G D FF
Sbjct: 446 GKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFF 505
Query: 346 NCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMN 405
+ +I L + RV +A ++ + + G+ PD +N ++ + G EKA V + M
Sbjct: 506 SSIINNLCKLGRVMDAQNIFDLTV-NVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMV 564
Query: 406 KLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRAN 465
+PNV + L+ K G+ DE LS L +M+ + + Y+++I GL A
Sbjct: 565 S-AGIEPNVVGYGTLVNGYCKIGRIDEGLS-LFREMLQR-GIKPSTILYSIIIDGLFEAG 621
Query: 466 KCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
+ A + F EM I T ++L + + +D A
Sbjct: 622 RTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEA 661
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 143/311 (45%), Gaps = 8/311 (2%)
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEA- 256
L + T +L+D + + ELA + F +L ++ + N N + G+C+ R DEA
Sbjct: 110 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 169
Query: 257 QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG--CPPNVVTYTTVM 314
+ GC P V SYS +++S C Q + +LL M G C PNVV Y TV+
Sbjct: 170 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 229
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
K GD +A + ++M G PD +N +++ L +A R + + +M V
Sbjct: 230 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKA-RAMDKAEAFLRQMVNKRV 288
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
P+ T+N +I +S G ++A V +EM + P+V T L+ S K GK E
Sbjct: 289 LPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRR-HSILPDVVTLSMLMGSLCKYGKIKEA- 346
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
+ D M K + D+ +Y ++++G LF M+G I P + T +++
Sbjct: 347 RDVFDTMAMKGQ-NPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIK 405
Query: 495 EVKQKHMYDAA 505
M D A
Sbjct: 406 AYANCGMLDKA 416
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 173/388 (44%), Gaps = 48/388 (12%)
Query: 167 TLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF 226
T +T A +M + A + E A+ F +L GL N N LL+ C+ + + A +
Sbjct: 113 TSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDIL 172
Query: 227 L----ELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG--CHPCVISYSTIIQ 280
L EL C+P + +++I + C + +A ++ M G C P V++Y+T+I
Sbjct: 173 LHRTPEL-GCVP-DVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVID 230
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKS-------------------- 320
+ ++ + +K +L EM +G PP++VTY +V+ L K+
Sbjct: 231 GFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLP 290
Query: 321 ---------------GDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
G ++EA+R+ ++M+ PD + L+ +L + +++EA V+
Sbjct: 291 NNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVF 350
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
M G PD ++N M+ ++ G + + M + P+ TF+ L+K+
Sbjct: 351 DT-MAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLG-DGIAPDFYTFNVLIKAYA 408
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP- 484
G D+ + ++ + + H + D+ TY VI LCR K + A F +MI + P
Sbjct: 409 NCGMLDKAM--IIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPD 466
Query: 485 RYQTCRLILDEVKQKHMYDAAEKIEAVM 512
+Y LI + A E I +M
Sbjct: 467 KYAYNCLIQGFCTHGSLLKAKELISEIM 494
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/411 (20%), Positives = 172/411 (41%), Gaps = 44/411 (10%)
Query: 94 NAIQPSHYLVNKLIHRFKD--DWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMD 151
+ I P Y N LI + + A+ IF G + Y ++ L ++ +MD
Sbjct: 391 DGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRD-HGVKPDVVTYRTVIAALCRIGKMD 449
Query: 152 Q-MRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLL 210
M + + +G +++ F G A E+ G+ + + ++
Sbjct: 450 DAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSII 509
Query: 211 DTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCH 269
+ LCK G+V A+++F L + + P+A +N+ + G+C + ++++A M G
Sbjct: 510 NNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIE 569
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI 329
P V+ Y T++ YC+ + L EM +G P+ + Y+ ++ G FE +
Sbjct: 570 PNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIII-----DGLFEAGRTV 624
Query: 330 TEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFS 389
KMK EM E+G+A D T+N ++
Sbjct: 625 PAKMKF-------------------------------HEMTESGIAMDICTYNIVLRGLF 653
Query: 390 HHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSL 449
+ ++A + +E+ + + K N+ T + ++ F+T + +E ++ L +++ L
Sbjct: 654 KNRCFDEAIFLFKELRAM-NVKINIITLNTMIDGMFQTRRVEE--AKDLFASISRSRLVP 710
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKH 500
+ TY+++I L + E A +F M P + ++ E+ +K+
Sbjct: 711 SVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKN 761
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 126/266 (47%), Gaps = 3/266 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G + +Y M++D V +M++ + + M S G + ++ + G+ ++
Sbjct: 532 GLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEG 591
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHG 246
+ F E+ G++ +T ++++D L + G+ A+ F E+ +S I + T+NI + G
Sbjct: 592 LSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRG 651
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
K DEA + +E++ +I+ +T+I + + +L + P+
Sbjct: 652 LFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPS 711
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
VVTY+ +++ L K G EEA + M+ G +P+SR N ++ L + + + A Y
Sbjct: 712 VVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRA-GAYL 770
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHG 392
++ E + + T ++ +FS G
Sbjct: 771 SKIDERNFSLEHLTAMLLVDLFSSKG 796
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 93/243 (38%), Gaps = 50/243 (20%)
Query: 290 KVYELLDEMQAQGCP------------------------------------------PNV 307
+ ++LLDE+Q +G P P V
Sbjct: 50 EAHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSGPALAVALFNRAASRAQGPRV 109
Query: 308 V-----TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
+ TY +M ++ E A+ ++ G + + N L+ A R EA+
Sbjct: 110 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 169
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH-CKPNVQTFHPLL 421
+ PE G PD +++ ++ G +A +L M + C PNV ++ ++
Sbjct: 170 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 229
Query: 422 KSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHD 481
FK G ++ L +MV + + D+ TY V+H LC+A + A ++M+
Sbjct: 230 DGFFKEGDVNKA-CDLFKEMVQR-GIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKR 287
Query: 482 ITP 484
+ P
Sbjct: 288 VLP 290
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 93/202 (46%), Gaps = 2/202 (0%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDA 187
G + S+ +Y +++D L + + + EM++ I + + T V+R +++A
Sbjct: 602 GIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEA 661
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHG 246
+ F EL ++ N T+N ++D + + +VE A+ +F + +S + P+ T++I I
Sbjct: 662 IFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITN 721
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
K V+EA+ M+ GC P + +++ ++ + L ++ +
Sbjct: 722 LIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLE 781
Query: 307 VVTYTTVMSYLAKSGDFEEAIR 328
+T ++ + G E IR
Sbjct: 782 HLTAMLLVDLFSSKGTCREQIR 803
>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 170/362 (46%), Gaps = 41/362 (11%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +++D L K +D LL EM + +I + T ++ GQWE E+
Sbjct: 206 YSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMV 265
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
+ N T ++L+D LCKEGKVE A V + + + P+ T++ + G+C +VD
Sbjct: 266 NLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVD 325
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
A+ ++ G P + SYS +I YC++ N +K +L E+ +G P+ VTY+T++
Sbjct: 326 RARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTIL 385
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPD--------------------------------- 341
L + G +A +I ++M VG PD
Sbjct: 386 HGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNRED 445
Query: 342 --SRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
F+ +I L + RV+EA +++ ++P G+ PD T+N MIT F G ++
Sbjct: 446 TNISFYTVVINGLCKNDRVREAHAIFE-KLPSIGLIPDVRTYNVMITGFCREGLFDEVKG 504
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIH 459
+L +M C N T++ +++ F++ K E +S + +M + S D TT ++I+
Sbjct: 505 ILRKMED-NGCPANNITYNVIMQGFFRSNKISEIVS-FMKEMAGR-GFSFDATTTGVLIN 561
Query: 460 GL 461
L
Sbjct: 562 VL 563
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 174/345 (50%), Gaps = 8/345 (2%)
Query: 172 AKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK- 230
VM S G E + + + + T ++++D LCK+ ++ A ++ E+K
Sbjct: 172 GTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQ 231
Query: 231 SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSK 290
IPPN T+N I G CK+ + ++ + + EM +P V ++S +I C++
Sbjct: 232 KNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVED 291
Query: 291 VYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIY 350
E++ M +G P+++TY+ +M G + A R+ ++ G KP+ ++ LI
Sbjct: 292 ADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILIN 351
Query: 351 TLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHC 410
+ + +A+ ++ E+ + G+ PDT T++T++ G A + +EM ++
Sbjct: 352 GYCKKKNLAKAMQLFG-EISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPT 410
Query: 411 KPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWA 470
P++ LL FK G +E + LL + ++ +I+ YT+VI+GLC+ ++ A
Sbjct: 411 -PDICLHSTLLFGYFKYGLVEEAM--LLFSKLERNREDTNISFYTVVINGLCKNDRVREA 467
Query: 471 YLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
+ +F+++ + P +T +++ ++ ++D +++ +++K+
Sbjct: 468 HAIFEKLPSIGLIPDVRTYNVMITGFCREGLFD---EVKGILRKM 509
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 158/353 (44%), Gaps = 47/353 (13%)
Query: 172 AKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELK 230
+K+ + + V F E+ G+ + +N++ ++ C +++ A SV + LK
Sbjct: 66 SKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNIVTNSYCLRHRIDCAFSVLPIYLK 125
Query: 231 SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM----------------------KGH-- 266
+ IP N TFN + G N+V +A +++ +GH
Sbjct: 126 TGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTE 185
Query: 267 ------------GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
P V +YS +I + C+ N LL+EM+ + PPN+ TY +++
Sbjct: 186 KTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLI 245
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
L K G +E+ + +M + P+ F+ LI L + +V++A V + M E GV
Sbjct: 246 DGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMR-HMIEKGV 304
Query: 375 APDTSTFNTMITMFSHHGHHEKA---FHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
PD T++ ++ + G ++A F+VL + + KPN+ ++ L+ K
Sbjct: 305 EPDIITYSAIMDGYCLRGQVDRARRVFNVLRD----KGIKPNIFSYSILINGYCKKKNLA 360
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
+ + QL + +++ L D TY+ ++HGL + A +F EM+ TP
Sbjct: 361 KAM-QLFGE-ISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTP 411
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 121/263 (46%), Gaps = 4/263 (1%)
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
+D+A M P VI +S + ++ ++S V L EM+ G P +
Sbjct: 43 LDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNI 102
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN 372
V + + A + G + FN L+ L ++V +AV +++ + E
Sbjct: 103 VTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREK 162
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
P+ + T++ S GH EK +L M + + KP+V+T+ ++ + K D
Sbjct: 163 ICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQ-GNTKPDVRTYSIVIDALCKDINLDA 221
Query: 433 CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLI 492
++ LL++M K+ + +I TY +I GLC+ + E L EM+ +I P T ++
Sbjct: 222 AIN-LLNEMKQKN-IPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSIL 279
Query: 493 LDEV-KQKHMYDAAEKIEAVMKK 514
+D + K+ + DA E + +++K
Sbjct: 280 IDGLCKEGKVEDADEVMRHMIEK 302
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 141/305 (46%), Gaps = 29/305 (9%)
Query: 41 IESYCSDGARLDHHQVL--CVDSPRLPDIDVIISKVHVG-------SSEDEVFQSLKQDH 91
I+ C +G D +V+ ++ PDI + S + G VF L+
Sbjct: 280 IDGLCKEGKVEDADEVMRHMIEKGVEPDI-ITYSAIMDGYCLRGQVDRARRVFNVLRD-- 336
Query: 92 VCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQ 149
I+P+ + + LI+ + K + A+ +F S G + + Y ++ L +V +
Sbjct: 337 --KGIKPNIFSYSILINGYCKKKNLAKAMQLFGEI-SQKGLKPDTVTYSTILHGLIEVGR 393
Query: 150 MDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNL 208
+ + + +EM + G + + ++ + G E+A+ F +L E+N E N+
Sbjct: 394 IGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKL-----ERNREDTNI 448
Query: 209 -----LLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQE 262
+++ LCK +V A ++F +L S + P+ T+N+ I G+C+ DE + +++
Sbjct: 449 SFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRK 508
Query: 263 MKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGD 322
M+ +GC I+Y+ I+Q + R S++ + EM +G + T +++ L ++
Sbjct: 509 MEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLINVLKENPS 568
Query: 323 FEEAI 327
+ I
Sbjct: 569 IVDMI 573
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 187/377 (49%), Gaps = 12/377 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ L K + MD+ +L M K G + T ++ + +GQ ++A+ ++
Sbjct: 234 YNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMR 293
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
+ G+E + T +LL+D LCK G+ AR +F + K + P T+ + G+ +
Sbjct: 294 SDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALV 353
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
E + M +G HP +S +I +Y Q + + +M+ QG PN VTY V+
Sbjct: 354 EMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVI 413
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL---GRASRVQEAVYVYQVEMPE 371
L KSG E+A+ E+M G P + +N LI+ L + R +E + +EM +
Sbjct: 414 GILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELI----LEMLD 469
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
G+ +T FN++I G ++ + E M ++ KPNV T++ L+ GK D
Sbjct: 470 RGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRI-GVKPNVITYNTLINGYCLAGKMD 528
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRL 491
E + +LL MV+ L + TY+ +I+G C+ ++ E A +LFKEM ++P T +
Sbjct: 529 EAM-KLLSGMVSVG-LKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNI 586
Query: 492 ILDEVKQKHMYDAAEKI 508
IL + Q AA+++
Sbjct: 587 ILQGLFQTRRTAAAKEL 603
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 121/509 (23%), Positives = 232/509 (45%), Gaps = 58/509 (11%)
Query: 46 SDGARLDHHQVLCVDSPRLPDI---DVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYL 102
SD A +H++L D LPD+ + II+ + + D+ + L V N + P
Sbjct: 212 SDKAYSTYHEML--DRGILPDVVTYNSIIAALCKAQAMDKAMEVLNT-MVKNGVMPDCMT 268
Query: 103 VNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM 160
N ++H + K A+G + S G E Y +++D L K + + R + + M
Sbjct: 269 YNSILHGYCSSGQPKEAIGFLKKMRS-DGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSM 327
Query: 161 SK--------------------GHIVTLNTIAKVMRR----------------FSGAGQW 184
+K G +V ++ + +M R ++ G+
Sbjct: 328 TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKV 387
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIF 243
+ A+ F ++ GL N T ++ LCK G+VE A F ++ + P +N
Sbjct: 388 DQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSL 447
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
IHG C N+ + A+ I EM G I +++II S+C++ + +L + M G
Sbjct: 448 IHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGV 507
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
PNV+TY T+++ +G +EA+++ M VG KP++ ++ LI + SR+++A+
Sbjct: 508 KPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALV 567
Query: 364 VYQVEMPENGVAPDTSTFNTMI-TMFSHH---GHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
+++ EM +GV+PD T+N ++ +F E + E ++E + T++
Sbjct: 568 LFK-EMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIE-----LSTYNI 621
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
+L K TD+ L Q+ ++ L L+ T+ ++I L + + + A LF
Sbjct: 622 ILHGLCKNKLTDDAL-QMFQNLC-LMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSS 679
Query: 480 HDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+ + P Y T RL+ + + + + + +++
Sbjct: 680 NGLVPNYWTYRLMAENIIGQGLLEELDQL 708
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 160/338 (47%), Gaps = 15/338 (4%)
Query: 155 ALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDA----VRTFDELGTFGLEKNTETMNLLL 210
AL + KG V +++ + DA +R ELG N + N+LL
Sbjct: 109 ALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCI---PNVFSYNILL 165
Query: 211 DTLCKEGK----VELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
LC E + +EL + + PP+ ++ I+G+ K D+A T EM
Sbjct: 166 KGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDR 225
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
G P V++Y++II + C+ K E+L+ M G P+ +TY +++ SG +EA
Sbjct: 226 GILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEA 285
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
I +KM+ G +PD ++ L+ L + R EA ++ M + G+ P+ +T+ T++
Sbjct: 286 IGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFD-SMTKRGLKPEITTYGTLLQ 344
Query: 387 MFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHH 446
++ G + +L+ M + P+ F L+ + GK D+ + L+ + +
Sbjct: 345 GYATKGALVEMHGLLDLMVR-NGIHPDHYVFSILICAYANQGKVDQAM--LVFSKMRQQG 401
Query: 447 LSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
L+ + TY VI LC++ + E A L F++MI ++P
Sbjct: 402 LNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSP 439
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 137/278 (49%), Gaps = 11/278 (3%)
Query: 209 LLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG 267
+++ KEG + A S + E L I P+ T+N I CK +D+A + M +G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG 261
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
P ++Y++I+ YC + L +M++ G P+VVTY+ +M YL K+G EA
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEAR 321
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITM 387
+I + M G KP+ + L+ + E + + M NG+ PD F+ +I
Sbjct: 322 KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDL-MVRNGIHPDHYVFSILICA 380
Query: 388 FSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL---SQLLDDMVNK 444
+++ G ++A V +M + + PN T+ ++ K+G+ ++ + Q++D+ ++
Sbjct: 381 YANQGKVDQAMLVFSKMRQ-QGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSP 439
Query: 445 HHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
++ Y +IHGLC NK E A L EM+ I
Sbjct: 440 GNI-----VYNSLIHGLCTCNKWERAEELILEMLDRGI 472
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 168/368 (45%), Gaps = 18/368 (4%)
Query: 156 LLEEMSKGHIVTLN-TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTE---TMNLLLD 211
LL I LN +A V R A AV ++ + G ++ T T +L+
Sbjct: 41 LLRRGRGASIYGLNRALADVARDSPAA-----AVSRYNRMARAGADEVTPDLCTYGILIG 95
Query: 212 TLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEA-QWTIQEMKGHGCH 269
C+ G+++L + +K +A F + G C R +A ++ M GC
Sbjct: 96 CCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCI 155
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEM---QAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
P V SY+ +++ C + + ELL M + G PP+VV+YTTV++ K GD ++A
Sbjct: 156 PNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKA 215
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
+M G PD +N +I L +A + +A+ V M +NGV PD T+N+++
Sbjct: 216 YSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNT-MVKNGVMPDCMTYNSILH 274
Query: 387 MFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHH 446
+ G ++A L++M + + +P+V T+ L+ K G+ E ++ D M K
Sbjct: 275 GYCSSGQPKEAIGFLKKM-RSDGVEPDVVTYSLLMDYLCKNGRCMEA-RKIFDSMT-KRG 331
Query: 447 LSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAE 506
L +ITTY ++ G + L M+ + I P + +++ + D A
Sbjct: 332 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAM 391
Query: 507 KIEAVMKK 514
+ + M++
Sbjct: 392 LVFSKMRQ 399
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 110/260 (42%), Gaps = 4/260 (1%)
Query: 149 QMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN 207
+MD+ LL M S G T + ++ + + EDA+ F E+ + G+ + T N
Sbjct: 526 KMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYN 585
Query: 208 LLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
++L L + + A+ +++ + +S T+NI +HG CK D+A Q +
Sbjct: 586 IILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLM 645
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
+++ +I + + + +L + G PN TY + + G EE
Sbjct: 646 DLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEEL 705
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
++ M+ G DS N ++ L + + A Y + E + + ST + I
Sbjct: 706 DQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA-GTYLSMIDEKHFSLEASTASLFID 764
Query: 387 MFSHHGHHEKAFHVLEEMNK 406
+ S G +++ + L E K
Sbjct: 765 LLS-GGKYQEYYRFLPEKYK 783
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 18/208 (8%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKG---HIVTLNTIAKVM---RRFSGA 181
G + ++ Y +++ K+ +M+ L +EM S G I+T N I + + RR + A
Sbjct: 541 GLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAA 600
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCI---PPNAH 238
+ + + G + T N++L LCK + A +F L C+ A
Sbjct: 601 KEL------YVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNL--CLMDLKLEAR 652
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
TFNI I K+ R DEA+ +G P +Y + ++ Q ++ +L M
Sbjct: 653 TFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSM 712
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
+ GC + ++ L + G+ A
Sbjct: 713 EDNGCTVDSGMLNFIVRELLQRGEITRA 740
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 177/368 (48%), Gaps = 9/368 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
+ ++V+ L KV ++++ ++E+M +++T NT+ + G+ A
Sbjct: 158 FNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILK 217
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKIN 251
E+ G+ N T N+L+D CK+ V A VF E+ + + PN T+NI I+G C
Sbjct: 218 EMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDG 277
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
+VDEA +M P V++++ +I +C+ ++ L ++M+ QG PN +TYT
Sbjct: 278 KVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYT 337
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
T++ K G E+A + M G P+ +NCLI L R V+ A + EM
Sbjct: 338 TLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMN-EMVS 396
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
++ D T+N +I G KA +L+EM + + P+ T++ L+ + G
Sbjct: 397 KKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFE-KGLNPSHVTYNTLMDGYCREGNLR 455
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRL 491
L ++ + + ++ T+ ++I G C + E A L EM+ + P T +
Sbjct: 456 AAL--IVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEI 513
Query: 492 ILDEVKQK 499
I +E+ +K
Sbjct: 514 IKEEMMEK 521
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 163/323 (50%), Gaps = 8/323 (2%)
Query: 190 TFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWC 248
F G +G + + + N LL L KE + V+ E+ K I N +FNI ++G C
Sbjct: 107 AFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLC 166
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE---LLDEMQAQGCPP 305
K+ +++ A I++MK G P VI+Y+T+I YC+ K+Y+ +L EM A+G P
Sbjct: 167 KVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICP 226
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N VTY ++ K + A+R+ +M+ G +P+ +N LI L +V EAV +
Sbjct: 227 NEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALR 286
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
+M + + P+ T N +I F + +A ++ +M K + PN T+ L+ +
Sbjct: 287 D-QMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEK-QGVDPNAMTYTTLIDAYC 344
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
K G+ ++ + L +M+ + +++TY +I GLCR + A L EM+ ++
Sbjct: 345 KDGRMEDAFA--LYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSAD 402
Query: 486 YQTCRLILDEVKQKHMYDAAEKI 508
T +++D + +K A K+
Sbjct: 403 VVTYNILIDSLCKKGESRKAVKL 425
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 119/264 (45%), Gaps = 6/264 (2%)
Query: 62 PRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALG 119
P + +++I+ + DE +L+ V + ++P+ N LI+ F A+
Sbjct: 261 PNVVTYNILINGLCSDGKVDEAV-ALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAIN 319
Query: 120 IFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRF 178
+F G + ++ Y ++D K +M+ AL M +G ++T ++
Sbjct: 320 LFNDMEK-QGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGL 378
Query: 179 SGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNA 237
G + A +E+ + L + T N+L+D+LCK+G+ A + E+ + + P+
Sbjct: 379 CRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSH 438
Query: 238 HTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDE 297
T+N + G+C+ + A M+ G V++++ +I+ +C + LL+E
Sbjct: 439 VTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNE 498
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSG 321
M +G PN TY + + + G
Sbjct: 499 MLERGLVPNRTTYEIIKEEMMEKG 522
>gi|255660942|gb|ACU25640.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 484
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 197/389 (50%), Gaps = 14/389 (3%)
Query: 100 HYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEE 159
H LV ++H K+ + AL FRW +EH+ E + +++ILG+ +++ R +L +
Sbjct: 12 HELVYNVLHSAKNS-EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLD 70
Query: 160 MSKGHIVTLNTIAKVM-RRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
M K + + +M + AG +++V+ F ++ G+E+ ++ + L + + G+
Sbjct: 71 MPKKGLEWDEDLWVLMIDSYGKAGIVQESVKMFQKMEELGVERTIKSYDALFKVILRRGR 130
Query: 219 VELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
+A+ F + L I P HTFN+ + G+ +V+ A ++MK P V++Y+T
Sbjct: 131 YMMAKRYFNKMLSEGIEPTRHTFNVMMWGFFLSGKVETANRFFEDMKSREIMPDVVTYNT 190
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
++ YCR + + EM+ + P VVTYTT++ ++A+R+ E+MK G
Sbjct: 191 MVNGYCRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDALRLVEEMKGFG 250
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP-DTSTFNTMITMFSHHGHHEK 396
KP++ ++ L+ L A ++ EA + + EM E +AP D S F +I+ G +
Sbjct: 251 MKPNAITYSTLLPGLCNAEKMSEARSILK-EMVEKYIAPTDNSIFMRLISGQCKAGDLDA 309
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK-------HHLSL 449
A +VL+ M +L + L+++ K G+ D+ + +LLD ++ K L +
Sbjct: 310 AANVLKAMIRLS-VPTEAGHYGVLIENYCKAGEYDKAI-KLLDKVIEKDIILRPQSTLHM 367
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMI 478
+ + Y +I LC + A L ++++
Sbjct: 368 ESSAYNPLIEYLCNNGQTAKAEALVRQLM 396
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 111/238 (46%), Gaps = 6/238 (2%)
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+I SY + + ++ +M+ G + +Y + + + G + A R KM G
Sbjct: 86 MIDSYGKAGIVQESVKMFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEG 145
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKA 397
+P FN +++ + +V+ A ++ +M + PD T+NTM+ + E+A
Sbjct: 146 IEPTRHTFNVMMWGFFLSGKVETANRFFE-DMKSREIMPDVVTYNTMVNGYCRVKKMEEA 204
Query: 398 FHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLV 457
EM K + +P V T+ L+K + D+ L +L+++M + + TY+ +
Sbjct: 205 EKYFVEM-KGRNIEPTVVTYTTLIKGYVSVDRVDDAL-RLVEEM-KGFGMKPNAITYSTL 261
Query: 458 IHGLCRANKCEWAYLLFKEMIGHDITPRYQTC--RLILDEVKQKHMYDAAEKIEAVMK 513
+ GLC A K A + KEM+ I P + RLI + K + AA ++A+++
Sbjct: 262 LPGLCNAEKMSEARSILKEMVEKYIAPTDNSIFMRLISGQCKAGDLDAAANVLKAMIR 319
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 123/294 (41%), Gaps = 46/294 (15%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y MV+ +V++M++ EM +I T+ T +++ + + +DA+R +E+
Sbjct: 188 YNTMVNGYCRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDALRLVEEMK 247
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRV 253
FG++ N T + LL LC K+ ARS+ E+ K P + F I G CK +
Sbjct: 248 GFGMKPNAITYSTLLPGLCNAEKMSEARSILKEMVEKYIAPTDNSIFMRLISGQCKAGDL 307
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC---PPNVV-- 308
D A ++ M Y +I++YC+ + K +LLD++ + P + +
Sbjct: 308 DAAANVLKAMIRLSVPTEAGHYGVLIENYCKAGEYDKAIKLLDKVIEKDIILRPQSTLHM 367
Query: 309 ---TYTTVMSYLAKSGDFEEAIRITEKMKIVG-----------------SKPDSRFFNCL 348
Y ++ YL +G +A + ++ +G PDS F L
Sbjct: 368 ESSAYNPLIEYLCNNGQTAKAEALVRQLMKLGVQDPTALNTLIRGHSQEGSPDSAF-ELL 426
Query: 349 IYTLGRASRVQEAVYVYQVE-----------------MPENGVAPDTSTFNTMI 385
L R +++ Y V+ M ENG PD+S F +++
Sbjct: 427 KIMLRRKVDSEQSSYDSLVQSYLKKNEPADAKAALDSMIENGHLPDSSLFRSVM 480
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 85/179 (47%), Gaps = 4/179 (2%)
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N T+ ++ L ++ A I M G + D + +I + G+A VQE+V ++
Sbjct: 44 NRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDLWVLMIDSYGKAGIVQESVKMF 103
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
Q +M E GV +++ + + G + A +M E +P TF+ ++ F
Sbjct: 104 Q-KMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLS-EGIEPTRHTFNVMMWGFF 161
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
+GK E ++ +DM ++ + D+ TY +++G CR K E A F EM G +I P
Sbjct: 162 LSGKV-ETANRFFEDMKSREIMP-DVVTYNTMVNGYCRVKKMEEAEKYFVEMKGRNIEP 218
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 102/238 (42%), Gaps = 18/238 (7%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRFSG---AGQW 184
G + ++ Y ++ L +M + R++L+EM + +I T N+I MR SG AG
Sbjct: 250 GMKPNAITYSTLLPGLCNAEKMSEARSILKEMVEKYIAPTDNSI--FMRLISGQCKAGDL 307
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELA---------RSVFLELKSCIPP 235
+ A + + +L++ CK G+ + A + + L +S +
Sbjct: 308 DAAANVLKAMIRLSVPTEAGHYGVLIENYCKAGEYDKAIKLLDKVIEKDIILRPQSTLHM 367
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCH-PCVISYSTIIQSYCRQYNFSKVYEL 294
+ +N I C + +A+ ++++ G P ++ T+I+ + ++ + +EL
Sbjct: 368 ESSAYNPLIEYLCNNGQTAKAEALVRQLMKLGVQDPTALN--TLIRGHSQEGSPDSAFEL 425
Query: 295 LDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
L M + +Y +++ K + +A + M G PDS F ++ +L
Sbjct: 426 LKIMLRRKVDSEQSSYDSLVQSYLKKNEPADAKAALDSMIENGHLPDSSLFRSVMESL 483
>gi|297843042|ref|XP_002889402.1| hypothetical protein ARALYDRAFT_470202 [Arabidopsis lyrata subsp.
lyrata]
gi|297335244|gb|EFH65661.1| hypothetical protein ARALYDRAFT_470202 [Arabidopsis lyrata subsp.
lyrata]
Length = 490
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 117/415 (28%), Positives = 203/415 (48%), Gaps = 16/415 (3%)
Query: 40 PIESYCSDGARLD----HHQVLCVDSPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNA 95
P+ S C+ RL H L + + DV V + + LK+ +
Sbjct: 6 PLSSQCASNFRLSVSFLHSVALSCAKVPVEEEDVDAETVFRMINGSNLQGELKESLSSSG 65
Query: 96 IQPSHYLVNKLIHRFK---DDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQ 152
I S L+++++ R + + L +R+AG+ G+ HSS + M+ ILG+ R+ DQ
Sbjct: 66 IHLSKDLIDRVLKRVRFSHGNPIQTLEFYRYAGARRGFYHSSFSLDTMLYILGRNRKFDQ 125
Query: 153 MRALLEEMSKG--HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEK-NTETMNLL 209
+ +L E + +++ T+ V+ R + V +F + + +T N L
Sbjct: 126 IWEILIETKRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFKRLVPDFFDTACFNAL 185
Query: 210 LDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCH 269
L TLC+E + AR+V+ LK P+ TFNI + GW +EA+ +EMKG G
Sbjct: 186 LRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGW---KSSEEAEAFFEEMKGKGLK 242
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI 329
P V++Y+++I YC+ K Y+L+D+M+ + P+V+TYTT++ L G ++A +
Sbjct: 243 PDVVTYNSLIDVYCKDREIEKAYKLIDKMREEDETPDVITYTTIIGGLGLIGQPDKAREV 302
Query: 330 TEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFS 389
++MK G PD +N I A R+ +A + EM + G++P+ +T+N + S
Sbjct: 303 LKEMKEYGCYPDVAAYNAAIRNYCIARRLGDADKLVD-EMVKKGLSPNATTYNLFFRVLS 361
Query: 390 HHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK 444
+++ + E M C PN Q+ L+K + K D + +L +DMV K
Sbjct: 362 LANDLGRSWELYERMLG-NGCLPNTQSCMFLIKMFKRHEKVDMAM-RLWEDMVVK 414
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 88/214 (41%), Gaps = 8/214 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK----GHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++D+ K R++++ L+++M + ++T TI + GQ + A
Sbjct: 248 YNSLIDVYCKDREIEKAYKLIDKMREEDETPDVITYTTI---IGGLGLIGQPDKAREVLK 304
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKIN 251
E+ +G + N + C ++ A + E+ K + PNA T+N+F N
Sbjct: 305 EMKEYGCYPDVAAYNAAIRNYCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLAN 364
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
+ + + M G+GC P S +I+ + R L ++M +G +
Sbjct: 365 DLGRSWELYERMLGNGCLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYSLVSD 424
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFF 345
++ L EEA + +M G +P + F
Sbjct: 425 VLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSF 458
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 87/209 (41%), Gaps = 10/209 (4%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ LG + Q D+ R +L+EM + G + +R + A + DA + DE+
Sbjct: 283 YTTIIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNYCIARRLGDADKLVDEMV 342
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFL---ELKSCIPPNAHTFNIFIHGWCKINR 252
GL N T NL L +L RS L L + PN + I + + +
Sbjct: 343 KKGLSPNATTYNLFFRVLSLAN--DLGRSWELYERMLGNGCLPNTQSCMFLIKMFKRHEK 400
Query: 253 VDEAQ--WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
VD A W +KG G + V + + + + L EM +G P+ V++
Sbjct: 401 VDMAMRLWEDMVVKGFGSYSLVSDVLLDLLCDLAK--VEEAEKCLLEMVEKGHRPSNVSF 458
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
+ + + +E + +KM I G++
Sbjct: 459 KRIKLLMELANKHDEVNNLIQKMAIFGTE 487
>gi|302143409|emb|CBI21970.3| unnamed protein product [Vitis vinifera]
Length = 375
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 172/347 (49%), Gaps = 8/347 (2%)
Query: 172 AKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LK 230
+K++ + + + + ++ +FG+ NT T+N+L+++ C ++ A SV + LK
Sbjct: 14 SKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILK 73
Query: 231 SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSK 290
P+ TF I G C ++ EA +M G G P V++Y T+I C+ ++
Sbjct: 74 LGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKDRQLTE 133
Query: 291 VYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIY 350
L +M A+G PN TY++++ L G ++EAIR+ M PD FN L+
Sbjct: 134 ALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVD 193
Query: 351 TLGRASRVQ---EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKL 407
L + +Q +A+ +++ EM + G+ PDT T+NT+I H G A + EM
Sbjct: 194 ALCKEGMIQIMDKAMGLFE-EMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVY 252
Query: 408 EHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKC 467
P++ T+ L K + E + +L ++ +L DI Y++V+ G+CRA +
Sbjct: 253 GQI-PDLVTYRILFDYLCKNHRLAEAM--VLLKVIEGTNLDPDIHIYSIVMDGMCRAGEL 309
Query: 468 EWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
E A LF ++ + P +T ++++ + Q+ + A K+ M +
Sbjct: 310 EAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDE 356
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 164/374 (43%), Gaps = 45/374 (12%)
Query: 114 WKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIA 172
+ + L +++ S G H++ ++++ + ++ ++L ++ K G+ + T
Sbjct: 26 YSTVLSLYKQMDSF-GIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFT 84
Query: 173 KVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKS 231
++R G+ +A++ FD++ G + + T L++ LCK+ ++ A S+F + L
Sbjct: 85 TLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKDRQLTEALSLFSDMLAK 144
Query: 232 CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF--- 288
I PN T++ IHG C + EA M P ++++T++ + C++
Sbjct: 145 GISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMIQIM 204
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
K L +EM QG P+ VTY T++ L G +AI + +M + G PD + L
Sbjct: 205 DKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRIL 264
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
L + R+ EA+ + +V N + PD ++ ++ G E A + +++
Sbjct: 265 FDYLCKNHRLAEAMVLLKVIEGTN-LDPDIHIYSIVMDGMCRAGELEAARDLFSKLSS-- 321
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
+ HP D+ TYT++I+GLC+
Sbjct: 322 ------KGLHP------------------------------DVRTYTIMINGLCQQGLLA 345
Query: 469 WAYLLFKEMIGHDI 482
A LF EM +DI
Sbjct: 346 EASKLFGEMDENDI 359
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 125/270 (46%), Gaps = 7/270 (2%)
Query: 234 PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
PP+ F+ + ++ ++M G + + +I S+C +
Sbjct: 7 PPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFS 66
Query: 294 LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLG 353
+L ++ G P+ T+TT++ L G EA+++ +KM G +PD + LI L
Sbjct: 67 VLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLC 126
Query: 354 RASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPN 413
+ ++ EA+ ++ +M G++P+ T++++I GH ++A + M P+
Sbjct: 127 KDRQLTEALSLFS-DMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIH-RKIMPD 184
Query: 414 VQTFHPLLKSCFKTGKT---DECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWA 470
TF+ L+ + K G D+ + L ++M ++ L D TY +IHGLC + A
Sbjct: 185 QLTFNTLVDALCKEGMIQIMDKAMG-LFEEM-SQQGLIPDTVTYNTLIHGLCHVGRLRDA 242
Query: 471 YLLFKEMIGHDITPRYQTCRLILDEVKQKH 500
LF EM+ + P T R++ D + + H
Sbjct: 243 IALFHEMVVYGQIPDLVTYRILFDYLCKNH 272
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 102/220 (46%), Gaps = 8/220 (3%)
Query: 86 SLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDI 143
SL D + I P+++ + LIH WK A+ +F +A + +VD
Sbjct: 136 SLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLF-YAMIHRKIMPDQLTFNTLVDA 194
Query: 144 L---GKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGL 199
L G ++ MD+ L EEMS +G I T ++ G+ DA+ F E+ +G
Sbjct: 195 LCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQ 254
Query: 200 EKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQW 258
+ T +L D LCK ++ A + ++ + P+ H ++I + G C+ ++ A+
Sbjct: 255 IPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARD 314
Query: 259 TIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
++ G HP V +Y+ +I C+Q ++ +L EM
Sbjct: 315 LFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEM 354
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 102/212 (48%), Gaps = 4/212 (1%)
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
PP++V ++ +++ + + + + + ++M G ++ N LI + +R+ A
Sbjct: 7 PPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFS 66
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
V ++ + G P T+TF T+I G +A + ++M E +P+V T+ L+
Sbjct: 67 VLG-DILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTG-EGFQPDVLTYGTLING 124
Query: 424 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
K + E LS L DM+ K +S + TY+ +IHGLC + A LF MI I
Sbjct: 125 LCKDRQLTEALS-LFSDMLAKG-ISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIM 182
Query: 484 PRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
P T ++D + ++ M +K + +++
Sbjct: 183 PDQLTFNTLVDALCKEGMIQIMDKAMGLFEEM 214
>gi|255660926|gb|ACU25632.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 484
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 196/389 (50%), Gaps = 14/389 (3%)
Query: 100 HYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEE 159
H LV ++H K+ + AL FRW +EH+ E + +++ILG+ +++ R +L +
Sbjct: 12 HELVYNVLHGAKNS-EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLD 70
Query: 160 MSKGHIVTLNTIAKVM-RRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
M K + + +M + G +++V+ F ++ G+E+ ++ + L + + G+
Sbjct: 71 MPKKGLEWDEDMWVLMIDSYGKEGIVQESVKLFQKMEELGVERTIKSYDALFKVIMRRGR 130
Query: 219 VELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
+A+ F + L I P HTFN+ I G+ +V+ A ++MK P VI+Y+T
Sbjct: 131 FMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVITYNT 190
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+I YCR + + EM+ + P VVTYTT++ ++A+R+ E+MK G
Sbjct: 191 MINGYCRVKKMEEAEKYFVEMKGKNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGYG 250
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP-DTSTFNTMITMFSHHGHHEK 396
KP++ ++ L+ L A ++ EA + + EM + +AP D S F +I+ G+ +
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMSEARSILK-EMVDKYIAPTDNSIFMRLISSHCKVGNLDA 309
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK-------HHLSL 449
A VL+ M +L + L+++ K G+ D+ + +LLD ++ K L +
Sbjct: 310 AADVLKAMIRLS-VPTEAGHYGVLIENYCKAGQYDQAV-KLLDKLIEKDIIVRPQSTLHM 367
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMI 478
+ + Y ++ LC + A L ++++
Sbjct: 368 EPSAYNPIVEYLCNNGQTSKAEALVRQLM 396
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 143/331 (43%), Gaps = 5/331 (1%)
Query: 180 GAGQWEDAVRTFDELGTFGL-EKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNA 237
GA E A++ F + L E N ET +++ L + K+ AR + L++ K + +
Sbjct: 21 GAKNSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDE 80
Query: 238 HTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDE 297
+ + I + K V E+ Q+M+ G + SY + + R+ F ++
Sbjct: 81 DMWVLMIDSYGKEGIVQESVKLFQKMEELGVERTIKSYDALFKVIMRRGRFMMAKRYFNK 140
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
M ++G P T+ ++ SG E A R E MK PD +N +I R +
Sbjct: 141 MLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVITYNTMINGYCRVKK 200
Query: 358 VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTF 417
++EA Y VEM + P T+ T+I + + A ++EEM K KPN T+
Sbjct: 201 MEEAEK-YFVEMKGKNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEM-KGYGIKPNAITY 258
Query: 418 HPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
LL K E S +L +MV+K+ D + + +I C+ + A + K M
Sbjct: 259 STLLPGLCNAEKMSEARS-ILKEMVDKYIAPTDNSIFMRLISSHCKVGNLDAAADVLKAM 317
Query: 478 IGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
I + ++++ + YD A K+
Sbjct: 318 IRLSVPTEAGHYGVLIENYCKAGQYDQAVKL 348
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 128/267 (47%), Gaps = 6/267 (2%)
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
+ ++++ A+ + +M G + +I SY ++ + +L +M+ G +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVLMIDSYGKEGIVQESVKLFQKMEELGVERTIK 116
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
+Y + + + G F A R KM G +P FN +I+ + +V+ A ++ +
Sbjct: 117 SYDALFKVIMRRGRFMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFE-D 175
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M ++PD T+NTMI + E+A EM K ++ +P V T+ L+K
Sbjct: 176 MKSREISPDVITYNTMINGYCRVKKMEEAEKYFVEM-KGKNIEPTVVTYTTLIKGYVSVD 234
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ D+ L +L+++M + + + TY+ ++ GLC A K A + KEM+ I P +
Sbjct: 235 QVDDAL-RLVEEM-KGYGIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYIAPTDNS 292
Query: 489 C--RLILDEVKQKHMYDAAEKIEAVMK 513
RLI K ++ AA+ ++A+++
Sbjct: 293 IFMRLISSHCKVGNLDAAADVLKAMIR 319
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 5/205 (2%)
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N T+ ++ L ++ A I M G + D + +I + G+ VQE+V ++
Sbjct: 44 NRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVLMIDSYGKEGIVQESVKLF 103
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
Q +M E GV +++ + + G A +M E +P TF+ ++ F
Sbjct: 104 Q-KMEELGVERTIKSYDALFKVIMRRGRFMMAKRYFNKMLS-EGIEPTRHTFNVMIWGFF 161
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
+GK E ++ +DM ++ +S D+ TY +I+G CR K E A F EM G +I P
Sbjct: 162 LSGKV-ETANRFFEDMKSRE-ISPDVITYNTMINGYCRVKKMEEAEKYFVEMKGKNIEPT 219
Query: 486 YQT-CRLILDEVKQKHMYDAAEKIE 509
T LI V + DA +E
Sbjct: 220 VVTYTTLIKGYVSVDQVDDALRLVE 244
>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
Length = 1393
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 191/383 (49%), Gaps = 10/383 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEE-MSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++D K+ + + LL++ + KG + T ++ G E A+ F+E
Sbjct: 293 YNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQ 352
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRV 253
G++ + N L+ LC +G + A V E+ + C P+ T+NI I+G CK+ +
Sbjct: 353 AKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGC-HPDIQTYNIVINGLCKMGNI 411
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
+A + + G P V +++T+I YC++ +L++ M G P+ +TY +V
Sbjct: 412 SDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSV 471
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
++ L K+G E ++M + G P+ +N LI R+++++EA V V+M + G
Sbjct: 472 LNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVI-VKMSQEG 530
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
+ PD +FNT+I F +G E A+ + +++ + + TF+ L+ + +GK +
Sbjct: 531 LHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGY-SATADTFNTLIGAF--SGKLNMH 587
Query: 434 LSQ-LLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLI 492
+++ + D+M++K H + D TY ++I G C+ + AY+ EMI P T +
Sbjct: 588 MAEKIFDEMLSKGHRA-DSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRV 646
Query: 493 LDEVKQKHMYDAAEKIEAVMKKL 515
++ + H A I +M K+
Sbjct: 647 INSLTVNHRVFQAVGIIHIMVKI 669
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 170/362 (46%), Gaps = 5/362 (1%)
Query: 154 RALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDT 212
R L ++M H+ L KV+ G +A ++ G+ N T N+ +
Sbjct: 171 RQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRG 230
Query: 213 LCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCV 272
LC+ G++ A + +++ P+ T+N I G CK + EA ++ M GC P
Sbjct: 231 LCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDD 290
Query: 273 ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEK 332
+Y+TII YC+ + ELL + +G P+ VTY ++++ L GD E A+ + +
Sbjct: 291 FTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNE 350
Query: 333 MKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
+ G KPD +N L+ L + A+ V EM E G PD T+N +I G
Sbjct: 351 AQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMN-EMAEEGCHPDIQTYNIVINGLCKMG 409
Query: 393 HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
+ A V+ + ++ P+V TF+ L+ K K D L QL++ M ++ ++ D
Sbjct: 410 NISDATVVMNDA-IMKGYLPDVFTFNTLIDGYCKRLKLDSAL-QLVERMW-EYGIAPDTI 466
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
TY V++GLC+A K F+EMI P T ++++ + + + A K+ M
Sbjct: 467 TYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKM 526
Query: 513 KK 514
+
Sbjct: 527 SQ 528
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 162/331 (48%), Gaps = 12/331 (3%)
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIH 245
A++ +E+ G + +T N++++ LCK G + A V + + P+ TFN I
Sbjct: 379 ALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLID 438
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G+CK ++D A ++ M +G P I+Y++++ C+ ++V E EM +GC P
Sbjct: 439 GYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHP 498
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N +TY ++ +S EEA ++ KM G PD+ FN LIY R ++ A ++
Sbjct: 499 NPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLF 558
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
Q ++ E G + TFNT+I FS + A + +EM H + + T+ L+
Sbjct: 559 Q-KLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGH-RADSYTYRVLIDGSC 616
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
KT D L+ +M+ K + ++T+ VI+ L ++ A + M+ + P
Sbjct: 617 KTANVDRAYMHLV-EMIKKGFIP-SMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP- 673
Query: 486 YQTCRLILDEVKQKHMYDAAEKI--EAVMKK 514
+ IL+ K++ AA KI E +MKK
Sbjct: 674 -EVVDTILNADKKEI---AAPKILVEDLMKK 700
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 132/311 (42%), Gaps = 10/311 (3%)
Query: 175 MRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCI 233
+R ++ AG+ DAV F+ + F N ++D L + A V++ L + +
Sbjct: 57 IRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGV 116
Query: 234 PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
P+ HT I + +C R A ++ + G ++Y T++ + +
Sbjct: 117 SPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQ 172
Query: 294 LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLG 353
L D+M PN+ + V+ L K GD EA + K+ G + +N I L
Sbjct: 173 LFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLC 232
Query: 354 RASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPN 413
A R+ EAV + V+ PD T+NT+I ++A H L M + C P+
Sbjct: 233 EAGRLPEAVRL--VDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMN-QGCLPD 289
Query: 414 VQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLL 473
T++ ++ K E ++LL D V K + D TY +I+GLC E A L
Sbjct: 290 DFTYNTIIDGYCKISMVQEA-TELLKDAVFKGFVP-DQVTYCSLINGLCAEGDVERALEL 347
Query: 474 FKEMIGHDITP 484
F E I P
Sbjct: 348 FNEAQAKGIKP 358
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 88/214 (41%), Gaps = 11/214 (5%)
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
HP Y I++Y R + + M CPP Y +M L + ++A +
Sbjct: 50 HPL---YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHK 106
Query: 329 ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF 388
+ +M G PD + + +R A+ + + +P G + T++
Sbjct: 107 VYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRA-LPHRGAV----AYCTVVCGL 161
Query: 389 SHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
HGH A + ++M H PN+ F+ +L + K G E + LL V + +S
Sbjct: 162 YAHGHTHDARQLFDQMLH-THVFPNLAAFNKVLHALCKRGDVLE--AGLLLGKVIQRGMS 218
Query: 449 LDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
+++ TY + I GLC A + A L M + +
Sbjct: 219 INLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV 252
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 7/147 (4%)
Query: 157 LEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKE 216
LEE KG+ T +T ++ FSG A + FDE+ + G ++ T +L+D CK
Sbjct: 561 LEE--KGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKT 618
Query: 217 GKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISY 275
V+ A +E+ K P+ TF I+ +RV +A I M G P V+
Sbjct: 619 ANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV-- 676
Query: 276 STIIQSYCRQYNFSKVYELLDEMQAQG 302
TI+ + ++ K+ L++++ +G
Sbjct: 677 DTILNADKKEIAAPKI--LVEDLMKKG 701
>gi|147797621|emb|CAN62945.1| hypothetical protein VITISV_002230 [Vitis vinifera]
Length = 912
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 174/349 (49%), Gaps = 16/349 (4%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVT--LNTIAKVMRRFSGAGQWEDAVRTFDEL 194
Y ++ + K ++ RA+ +++ K +V ++T ++R + G E+A FDE+
Sbjct: 220 YNAILGVFVKANRIMLARAVFDQIVKEGVVKPDVSTYTTIIRGYCKMGMIENAKNVFDEM 279
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSV---FLELKSCIPPNAHTFNIFIHGWCKIN 251
G + N T N +++ CK+G +E A + E + C+P T+ I G+CK
Sbjct: 280 GC---KPNLVTYNTMINGFCKKGLMESAMKIVDQMTETEDCMPDTV-TYTTLIDGYCKRG 335
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
++EA ++EM C P V++Y+ II C N + ++ M+ G NV T+T
Sbjct: 336 ELEEAMKYMEEMVSRNCEPNVLTYNAIIYGLCLNGNVDEAKRMMTRMRLNGLKDNVATHT 395
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
+++ L G ++A R ++M +G + D++ + ++ + + +A+ + + EM
Sbjct: 396 SILKGLCVVGKLDDAARHLKEMVGLGMEADAKAYGVVVNEYCKIGKADDAISLLK-EMKS 454
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS-CFKTGKT 430
G+ P S+FN + + G +KA +L +M +L C PN ++ ++ C G+
Sbjct: 455 RGINPSVSSFNAVFRILVESGKTDKAGLILRQMKQL-GCTPNFLSYSTVIDGLCKAKGRM 513
Query: 431 DECLSQLLDDMV-NKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
E + + +DDM N HHL D + Y+ ++ G C + A LF EM+
Sbjct: 514 HE-VEEFVDDMCRNGHHL--DASMYSWLVKGYCEDGNADMAMRLFCEML 559
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 182/385 (47%), Gaps = 17/385 (4%)
Query: 117 ALGIFRWAGSCPG----YEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIA 172
AL F WA + Y HS Y + D+L +LL+ H ++ A
Sbjct: 130 ALFFFNWASNPNPNPNNYSHSHLCYVAITDLLISHGLFSTASSLLQSH---HRLSDFAAA 186
Query: 173 KVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--K 230
K ++ + G A+ F + + N +L K ++ LAR+VF ++ +
Sbjct: 187 KFVKAYGDRGDIRGAIHWFHRAKKMESGRCLFSYNAILGVFVKANRIMLARAVFDQIVKE 246
Query: 231 SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSK 290
+ P+ T+ I G+CK+ ++ A+ EM GC P +++Y+T+I +C++
Sbjct: 247 GVVKPDVSTYTTIIRGYCKMGMIENAKNVFDEM---GCKPNLVTYNTMINGFCKKGLMES 303
Query: 291 VYELLDEM-QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
+++D+M + + C P+ VTYTT++ K G+ EEA++ E+M +P+ +N +I
Sbjct: 304 AMKIVDQMTETEDCMPDTVTYTTLIDGYCKRGELEEAMKYMEEMVSRNCEPNVLTYNAII 363
Query: 350 YTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH 409
Y L V EA + M NG+ + +T +++ G + A L+EM L
Sbjct: 364 YGLCLNGNVDEAKRM-MTRMRLNGLKDNVATHTSILKGLCVVGKLDDAARHLKEMVGLGM 422
Query: 410 CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEW 469
+ + + + ++ K GK D+ +S LL +M ++ ++ ++++ V L + K +
Sbjct: 423 -EADAKAYGVVVNEYCKIGKADDAIS-LLKEMKSRG-INPSVSSFNAVFRILVESGKTDK 479
Query: 470 AYLLFKEMIGHDITPRYQTCRLILD 494
A L+ ++M TP + + ++D
Sbjct: 480 AGLILRQMKQLGCTPNFLSYSTVID 504
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 153/325 (47%), Gaps = 6/325 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIA--KVMRRFSGAGQWEDAVRTFDEL 194
Y M++ K M+ ++++M++ +T+ ++ + G+ E+A++ +E+
Sbjct: 288 YNTMINGFCKKGLMESAMKIVDQMTETEDCMPDTVTYTTLIDGYCKRGELEEAMKYMEEM 347
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRV 253
+ E N T N ++ LC G V+ A+ + ++ + + N T + G C + ++
Sbjct: 348 VSRNCEPNVLTYNAIIYGLCLNGNVDEAKRMMTRMRLNGLKDNVATHTSILKGLCVVGKL 407
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
D+A ++EM G G +Y ++ YC+ LL EM+++G P+V ++ V
Sbjct: 408 DDAARHLKEMVGLGMEADAKAYGVVVNEYCKIGKADDAISLLKEMKSRGINPSVSSFNAV 467
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
L +SG ++A I +MK +G P+ ++ +I L +A V + +M NG
Sbjct: 468 FRILVESGKTDKAGLILRQMKQLGCTPNFLSYSTVIDGLCKAKGRMHEVEEFVDDMCRNG 527
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
D S ++ ++ + G+ + A + EM + + N+++F +K K E
Sbjct: 528 HHLDASMYSWLVKGYCEDGNADMAMRLFCEMLDMGYV-INLESFLAFVKGLSAKEKAFE- 585
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVI 458
+ + ++M ++ +DI Y ++
Sbjct: 586 VEKFFEEM-SRRCPGIDIHKYRRIL 609
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 88/193 (45%), Gaps = 5/193 (2%)
Query: 321 GDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTST 380
GD AI + K + S +N ++ +A+R+ A V+ + E V PD ST
Sbjct: 196 GDIRGAIHWFHRAKKMESGRCLFSYNAILGVFVKANRIMLARAVFDQIVKEGVVKPDVST 255
Query: 381 FNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDD 440
+ T+I + G E A +V +EM CKPN+ T++ ++ K G + + +++D
Sbjct: 256 YTTIIRGYCKMGMIENAKNVFDEMG----CKPNLVTYNTMINGFCKKGLMESAM-KIVDQ 310
Query: 441 MVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKH 500
M D TYT +I G C+ + E A +EM+ + P T I+ +
Sbjct: 311 MTETEDCMPDTVTYTTLIDGYCKRGELEEAMKYMEEMVSRNCEPNVLTYNAIIYGLCLNG 370
Query: 501 MYDAAEKIEAVMK 513
D A+++ M+
Sbjct: 371 NVDEAKRMMTRMR 383
>gi|297834384|ref|XP_002885074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330914|gb|EFH61333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 517
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 120/432 (27%), Positives = 208/432 (48%), Gaps = 15/432 (3%)
Query: 71 ISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGY 130
I K H GSS +E+ + L + C IQ + LV ++++R + DWK A + R Y
Sbjct: 78 IIKHHRGSSPEEIERILDK---C-GIQLTEELVFEVVNRNRSDWKPAYILSRLIVKHSVY 133
Query: 131 EHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVR 189
SS +Y ++D+LGK+R+ ++ +++EMSK V T ++ R++ A + ++AV
Sbjct: 134 ISSSLVYNEILDVLGKMRRFEEFHQVVDEMSKRDGFVDEKTYEVLLNRYAAAHKVDEAVG 193
Query: 190 TFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCK 249
F+ FG+E + + LL LC+ VE A ++F + + T NI ++GWC
Sbjct: 194 VFERRREFGIEDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIRTMNIILNGWCV 253
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
+ V EA+ +++ C P V+SY T+I + ++ K EL + G P+V
Sbjct: 254 LGNVHEAKRIWKDIIASKCKPDVVSYGTMINALTKKGKLGKAMELYRALWETGRNPDVKI 313
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM 369
V+ L EA+ + ++M G P+ +N L+ L + R E V+ EM
Sbjct: 314 CNNVIDALCFKKRIPEALEVFKEMSEKGPSPNVVTYNSLLKHLCKIRRT-EKVWELVEEM 372
Query: 370 PENG--VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKT 427
G +P+ TF ++ +S A VLE M K C+ ++ + + +
Sbjct: 373 EHKGGSCSPNDVTFGYLLK-YSQRSKDVDA--VLERMAK-NKCEMTSDLYNLMFR-LYVQ 427
Query: 428 GKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
+E + ++ +M + L D TYT+ IHGL K A F+EM+ + P +
Sbjct: 428 WDNEEKVREIWGEM-ERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPR 486
Query: 488 TCRLILDEVKQK 499
T ++L++ K K
Sbjct: 487 T-EMLLNQNKTK 497
>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
Length = 1380
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 191/383 (49%), Gaps = 10/383 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEE-MSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++D K+ + + LL++ + KG + T ++ G E A+ F+E
Sbjct: 294 YNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQ 353
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRV 253
G++ + N L+ LC +G + A V E+ + C P+ T+NI I+G CK+ +
Sbjct: 354 AKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGC-HPDIQTYNIVINGLCKMGNI 412
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
+A + + G P V +++T+I YC++ +L++ M G P+ +TY +V
Sbjct: 413 SDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSV 472
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
++ L K+G E ++M + G P+ +N LI R+++++EA V V+M + G
Sbjct: 473 LNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVI-VKMSQEG 531
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
+ PD +FNT+I F +G E A+ + +++ + + TF+ L+ + +GK +
Sbjct: 532 LHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGY-SATADTFNTLIGAF--SGKLNMH 588
Query: 434 LSQ-LLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLI 492
+++ + D+M++K H + D TY ++I G C+ + AY+ EMI P T +
Sbjct: 589 MAEKIFDEMLSKGHRA-DSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRV 647
Query: 493 LDEVKQKHMYDAAEKIEAVMKKL 515
++ + H A I +M K+
Sbjct: 648 INSLTVNHRVFQAVGIIHIMVKI 670
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 170/362 (46%), Gaps = 5/362 (1%)
Query: 154 RALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDT 212
R L ++M H+ L KV+ G +A ++ G+ N T N+ +
Sbjct: 172 RQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRG 231
Query: 213 LCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCV 272
LC+ G++ A + +++ P+ T+N I G CK + EA ++ M GC P
Sbjct: 232 LCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDD 291
Query: 273 ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEK 332
+Y+TII YC+ + ELL + +G P+ VTY ++++ L GD E A+ + +
Sbjct: 292 FTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNE 351
Query: 333 MKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
+ G KPD +N L+ L + A+ V EM E G PD T+N +I G
Sbjct: 352 AQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMN-EMAEEGCHPDIQTYNIVINGLCKMG 410
Query: 393 HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
+ A V+ + ++ P+V TF+ L+ K K D L QL++ M ++ ++ D
Sbjct: 411 NISDATVVMNDA-IMKGYLPDVFTFNTLIDGYCKRLKLDSAL-QLVERMW-EYGIAPDTI 467
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
TY V++GLC+A K F+EMI P T ++++ + + + A K+ M
Sbjct: 468 TYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKM 527
Query: 513 KK 514
+
Sbjct: 528 SQ 529
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 162/331 (48%), Gaps = 12/331 (3%)
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIH 245
A++ +E+ G + +T N++++ LCK G + A V + + P+ TFN I
Sbjct: 380 ALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLID 439
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G+CK ++D A ++ M +G P I+Y++++ C+ ++V E EM +GC P
Sbjct: 440 GYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHP 499
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N +TY ++ +S EEA ++ KM G PD+ FN LIY R ++ A ++
Sbjct: 500 NPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLF 559
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
Q ++ E G + TFNT+I FS + A + +EM H + + T+ L+
Sbjct: 560 Q-KLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGH-RADSYTYRVLIDGSC 617
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
KT D L+ +M+ K + ++T+ VI+ L ++ A + M+ + P
Sbjct: 618 KTANVDRAYMHLV-EMIKKGFIP-SMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP- 674
Query: 486 YQTCRLILDEVKQKHMYDAAEKI--EAVMKK 514
+ IL+ K++ AA KI E +MKK
Sbjct: 675 -EVVDTILNADKKEI---AAPKILVEDLMKK 701
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 132/311 (42%), Gaps = 10/311 (3%)
Query: 175 MRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCI 233
+R ++ AG+ DAV F+ + F N ++D L + A V++ L + +
Sbjct: 58 IRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGV 117
Query: 234 PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
P+ HT I + +C R A ++ + G ++Y T++ + +
Sbjct: 118 SPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQ 173
Query: 294 LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLG 353
L D+M PN+ + V+ L K GD EA + K+ G + +N I L
Sbjct: 174 LFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLC 233
Query: 354 RASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPN 413
A R+ EAV + V+ PD T+NT+I ++A H L M + C P+
Sbjct: 234 EAGRLPEAVRL--VDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMN-QGCLPD 290
Query: 414 VQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLL 473
T++ ++ K E ++LL D V K + D TY +I+GLC E A L
Sbjct: 291 DFTYNTIIDGYCKISMVQEA-TELLKDAVFKGFVP-DQVTYCSLINGLCAEGDVERALEL 348
Query: 474 FKEMIGHDITP 484
F E I P
Sbjct: 349 FNEAQAKGIKP 359
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 88/214 (41%), Gaps = 11/214 (5%)
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
HP Y I++Y R + + M CPP Y +M L + ++A +
Sbjct: 51 HPL---YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHK 107
Query: 329 ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF 388
+ +M G PD + + +R A+ + + +P G + T++
Sbjct: 108 VYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRA-LPHRGAV----AYCTVVCGL 162
Query: 389 SHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
HGH A + ++M H PN+ F+ +L + K G E + LL V + +S
Sbjct: 163 YAHGHTHDARQLFDQMLH-THVFPNLAAFNKVLHALCKRGDVLE--AGLLLGKVIQRGMS 219
Query: 449 LDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
+++ TY + I GLC A + A L M + +
Sbjct: 220 INLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV 253
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 7/147 (4%)
Query: 157 LEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKE 216
LEE KG+ T +T ++ FSG A + FDE+ + G ++ T +L+D CK
Sbjct: 562 LEE--KGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKT 619
Query: 217 GKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISY 275
V+ A +E+ K P+ TF I+ +RV +A I M G P V+
Sbjct: 620 ANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV-- 677
Query: 276 STIIQSYCRQYNFSKVYELLDEMQAQG 302
TI+ + ++ K+ L++++ +G
Sbjct: 678 DTILNADKKEIAAPKI--LVEDLMKKG 702
>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/431 (27%), Positives = 208/431 (48%), Gaps = 21/431 (4%)
Query: 82 EVFQSLKQDHVCNAIQPSHYLVNKLIHRFK-----DDWKSALGIFRWAGSCPGYEHSSEI 136
E+F+ L++ N P Y N +I + D+ S L R GS P S
Sbjct: 294 EMFEHLEK----NRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIP----SVIA 345
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGT 196
Y ++ L K+ ++D+ + EEM K L+T ++ AG+ + A D +
Sbjct: 346 YNCILTCLRKMGKVDEALRVFEEMKKDAAPNLSTYNILIDMLCRAGKLDCAFELRDSMQK 405
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKINRVD 254
GL N T+N+++D LCK K++ A ++F ++ K C P + TF I G K+ RVD
Sbjct: 406 AGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTP-DEITFCSLIDGLGKVGRVD 464
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
+A ++M C I Y+++I+++ +++ +M Q C P++ T M
Sbjct: 465 DAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYM 524
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
+ K+G+ E+ + E++K PD+R ++ LI+ L +A E ++ M E G
Sbjct: 525 DCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELF-YSMKEQGC 583
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
DT +N +I F G KA+ +LEEM K + +P V T+ ++ K + DE
Sbjct: 584 VLDTRAYNIVIDGFCKCGKVNKAYQLLEEM-KTKGFEPTVVTYGSVIDGLAKIDRLDE-- 640
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
+ +L + + L++ Y+ +I G + + + AYL+ +E++ +TP T +LD
Sbjct: 641 AYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLD 700
Query: 495 E-VKQKHMYDA 504
VK + + +A
Sbjct: 701 ALVKAEEINEA 711
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 182/415 (43%), Gaps = 8/415 (1%)
Query: 96 IQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRA 155
+P V ++ R KD A+ FRW H E Y ++ ++ + R D +
Sbjct: 61 FKPQPEFVIGVLRRLKD-VNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQ 119
Query: 156 LLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLC 214
+L EMS G ++NT +++ A + + + F L+
Sbjct: 120 ILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAFS 179
Query: 215 KEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI 273
++ ++F +++ P H F I G+ K RVD A + EMK ++
Sbjct: 180 AVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIV 239
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
Y+ I S+ + ++ E++A G P+ VTYT+++ L K+ +EA+ + E +
Sbjct: 240 LYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHL 299
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
+ P + +N +I G A + EA + + + + G P +N ++T G
Sbjct: 300 EKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAK-GSIPSVIAYNCILTCLRKMGK 358
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
++A V EEM K PN+ T++ L+ + GK D C +L D M K L ++ T
Sbjct: 359 VDEALRVFEEMKK--DAAPNLSTYNILIDMLCRAGKLD-CAFELRDSM-QKAGLFPNVRT 414
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+++ LC++ K + A +F++M TP T ++D + + D A KI
Sbjct: 415 VNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKI 469
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 182/412 (44%), Gaps = 41/412 (9%)
Query: 140 MVDILGKVRQMDQMRALLEEMSKGHIVTLNTI-AKVMRRFSGAGQWEDAVRTFDELGTFG 198
++D LGKV ++D + E+M T + + +++ F G+ ED + + ++
Sbjct: 453 LIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQN 512
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQ 257
+ + +N +D + K G+ E R++F E+KS P+A +++I IHG K +E
Sbjct: 513 CSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETY 572
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
MK GC +Y+ +I +C+ +K Y+LL+EM+ +G P VVTY +V+ L
Sbjct: 573 ELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGL 632
Query: 318 AK-----------------------------------SGDFEEAIRITEKMKIVGSKPDS 342
AK G +EA I E++ G P+
Sbjct: 633 AKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNV 692
Query: 343 RFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLE 402
+N L+ L +A + EA+ +Q M E P+ T+ +I KAF +
Sbjct: 693 YTWNSLLDALVKAEEINEALVCFQ-SMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQ 751
Query: 403 EMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC 462
EM K + KP+ ++ ++ K G E + L D + D Y +I GL
Sbjct: 752 EMQK-QGMKPSTISYTTMISGLAKAGNIAE--AGALFDRFKANGGVPDSACYNAMIEGLS 808
Query: 463 RANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
N+ A+ LF+E + +TC ++LD + + + A + AV+++
Sbjct: 809 NGNRAMDAFSLFEETRRRGLHIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRE 860
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 162/378 (42%), Gaps = 5/378 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVM-RRFSGAGQWEDA 187
G + Y M+ +L K ++D+ + E + K V M + AG++++A
Sbjct: 268 GLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEA 327
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGW 247
+ G + N +L L K GKV+ A VF E+K PN T+NI I
Sbjct: 328 YSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKKDAAPNLSTYNILIDML 387
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
C+ ++D A M+ G P V + + ++ C+ + + ++M + C P+
Sbjct: 388 CRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDE 447
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
+T+ +++ L K G ++A +I EKM + +S + LI R ++ +Y+
Sbjct: 448 ITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYK- 506
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKT 427
+M +PD NT + G EK + EE+ K P+ +++ L+ K
Sbjct: 507 DMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEI-KSRRFVPDARSYSILIHGLIKA 565
Query: 428 GKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
G +E +L M + LD Y +VI G C+ K AY L +EM P
Sbjct: 566 GFANETY-ELFYSM-KEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVV 623
Query: 488 TCRLILDEVKQKHMYDAA 505
T ++D + + D A
Sbjct: 624 TYGSVIDGLAKIDRLDEA 641
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 166/341 (48%), Gaps = 7/341 (2%)
Query: 33 SHIVSSSPIESYCSDGARLDHHQVL--CVDSPRLPDIDVIISKVH--VGSSEDEVFQSLK 88
+ IV +S I+++ + G + D H++ V+ PD+ ++ + + + E E +++
Sbjct: 481 NSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMF 540
Query: 89 QDHVCNAIQPSHYLVNKLIHRF-KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKV 147
++ P + LIH K + + ++ G + Y +++D K
Sbjct: 541 EEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKC 600
Query: 148 RQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETM 206
++++ LLEEM +KG T+ T V+ + + ++A F+E + +E N
Sbjct: 601 GKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIY 660
Query: 207 NLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKG 265
+ L+D K G+++ A + EL + + PN +T+N + K ++EA Q MK
Sbjct: 661 SSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKE 720
Query: 266 HGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEE 325
C P ++Y +I C+ F+K + EMQ QG P+ ++YTT++S LAK+G+ E
Sbjct: 721 LKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAE 780
Query: 326 AIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
A + ++ K G PDS +N +I L +R +A +++
Sbjct: 781 AGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFE 821
>gi|255578729|ref|XP_002530223.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530270|gb|EEF32170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 189/404 (46%), Gaps = 24/404 (5%)
Query: 101 YLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEE- 159
+ V ++ + + D +L F W + H+ E + M++ IL K R+ +L+
Sbjct: 60 FRVKHILLKIQKDHVLSLEFFNWVQTENPSSHTLETHSMILHILTKNRKFKSAELILKSV 119
Query: 160 MSKGHI------------------VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEK 201
+ KG I + + + + ++ +A TF ++ +G
Sbjct: 120 LVKGFIDLPDKLFEAILYSYRMCDSSPRVFDSLFKTLAHMKKFRNATDTFLQMKGYGFLP 179
Query: 202 NTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTI 260
E+ N L +L +V++A + + E++ C I PN +T N+ + +CK ++++A
Sbjct: 180 TVESCNAYLSSLLDLHRVDIALAFYKEMRRCRISPNVYTRNMVMRAFCKSGKLEKAVQVF 239
Query: 261 QEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKS 320
+EM+ G P SY+T+I YCR+ + +L + M+A+G NVVT+ +++ K
Sbjct: 240 EEMESVGISPNDTSYNTLIMGYCRKGLLNSAVKLKNSMRAKGVEANVVTFNSLIDGFCKE 299
Query: 321 GDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTST 380
G EA ++ +MK++ P++ +N LI + + +Y+ EM NGV D T
Sbjct: 300 GKLHEASKVFSEMKVLNVAPNTITYNTLINGHSQMGNSEMGRRLYE-EMSRNGVKADILT 358
Query: 381 FNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDD 440
+N +I G +KA ++++E++K E+ PN TF L+ +D QL
Sbjct: 359 YNALILGLCKEGKTKKAAYMVKELDK-ENLVPNASTFSALISGQCIRNNSDRAF-QLYKS 416
Query: 441 MVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
MV + + T+ +++ C+ E A+L+ EM TP
Sbjct: 417 MV-RIGCHPNEQTFNMLVSAFCKNEDFEGAFLVLMEMFERCFTP 459
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 134/289 (46%), Gaps = 9/289 (3%)
Query: 204 ETMNLLLDTLCKEGKVELARSVFLEL----KSCIPPNAHTFNIFIHGWCKINRVDEAQWT 259
++ L+L ++ +G ++L +F + + C + F+ + + A T
Sbjct: 110 KSAELILKSVLVKGFIDLPDKLFEAILYSYRMC-DSSPRVFDSLFKTLAHMKKFRNATDT 168
Query: 260 IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK 319
+MKG+G P V S + + S + EM+ PNV T VM K
Sbjct: 169 FLQMKGYGFLPTVESCNAYLSSLLDLHRVDIALAFYKEMRRCRISPNVYTRNMVMRAFCK 228
Query: 320 SGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTS 379
SG E+A+++ E+M+ VG P+ +N LI R + AV + + M GV +
Sbjct: 229 SGKLEKAVQVFEEMESVGISPNDTSYNTLIMGYCRKGLLNSAVKL-KNSMRAKGVEANVV 287
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLD 439
TFN++I F G +A V EM K+ + PN T++ L+ + G ++ + + L
Sbjct: 288 TFNSLIDGFCKEGKLHEASKVFSEM-KVLNVAPNTITYNTLINGHSQMGNSE--MGRRLY 344
Query: 440 DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ ++++ + DI TY +I GLC+ K + A + KE+ ++ P T
Sbjct: 345 EEMSRNGVKADILTYNALILGLCKEGKTKKAAYMVKELDKENLVPNAST 393
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 113/247 (45%), Gaps = 11/247 (4%)
Query: 95 AIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQ 152
I P+ N LI + K SA+ + + + G E + + ++D K ++ +
Sbjct: 246 GISPNDTSYNTLIMGYCRKGLLNSAVKL-KNSMRAKGVEANVVTFNSLIDGFCKEGKLHE 304
Query: 153 MRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNL 208
+ EM ++ +T NT+ + S G E R ++E+ G++ + T N
Sbjct: 305 ASKVFSEMKVLNVAPNTITYNTL---INGHSQMGNSEMGRRLYEEMSRNGVKADILTYNA 361
Query: 209 LLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG 267
L+ LCKEGK + A + EL K + PNA TF+ I G C N D A + M G
Sbjct: 362 LILGLCKEGKTKKAAYMVKELDKENLVPNASTFSALISGQCIRNNSDRAFQLYKSMVRIG 421
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
CHP +++ ++ ++C+ +F + +L EM + P + + L G A+
Sbjct: 422 CHPNEQTFNMLVSAFCKNEDFEGAFLVLMEMFERCFTPGSDVLSEIYHGLCCCGKEHLAM 481
Query: 328 RITEKMK 334
+++ ++K
Sbjct: 482 KLSSELK 488
>gi|125541207|gb|EAY87602.1| hypothetical protein OsI_09013 [Oryza sativa Indica Group]
Length = 555
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 186/404 (46%), Gaps = 31/404 (7%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILG----KVRQMDQMRALL 157
LV ++HR + D K A F WA GYEH + Y ++DIL K RQ + +L
Sbjct: 114 LVADVLHRLRYDEKLAFRFFVWASHQGGYEHEAATYNDVIDILSGTRYKARQFGVLCDVL 173
Query: 158 EEMSKGHI--VTLNTIAKVMRRFSG---------AGQWEDAVRTFDELGTFGLEKNTETM 206
+ M + V ++ + ++R ++ A + +RT E T+ +
Sbjct: 174 DHMKRRRTRSVPVDDLLGILRAYTEKHLTHLRKLAKKRRVRMRTPPE---------TDAL 224
Query: 207 NLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
N+LLD CK G V A +VF +K + NA T++I GWC+ A ++EM
Sbjct: 225 NVLLDAFCKSGMVREAEAVFSRVKRKLLGNAETYSILFFGWCRARDPKRAMKVLEEMIQM 284
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG---CPPNVVTYTTVMSYLAKSGDF 323
P +Y+ I S+C S+ +L + M+ +G P TY+ +++ LAK+G
Sbjct: 285 KHTPENFTYNAAIDSFCSAGLVSEARDLFEFMRTEGSTISSPTAKTYSIMIAALAKAGQM 344
Query: 324 EEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNT 383
EE + +M+ G PD + LI + ++ +A Y EM + G PD T+N
Sbjct: 345 EECFELISEMRKCGCMPDVSTYKDLIEGMLLVDKL-DAAYCVLDEMAKAGFPPDIVTYNC 403
Query: 384 MITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVN 443
+ + + A + E M + HC+P+V T++ L+ F+ + D ++ ++ ++
Sbjct: 404 FLKVLCGLQKADDALELCERMIE-AHCEPSVHTYNMLMVMFFEMREPDRAINIWIE--MD 460
Query: 444 KHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
K + TY +I GL + + E A L E+I + Y+
Sbjct: 461 KRGCHRAVDTYETMIDGLFDSGRTEDATTLLDEVINRGMKLSYK 504
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 98/221 (44%), Gaps = 5/221 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIV---TLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y +D + + R L E M ++G + T T + ++ + AGQ E+
Sbjct: 293 YNAAIDSFCSAGLVSEARDLFEFMRTEGSTISSPTAKTYSIMIAALAKAGQMEECFELIS 352
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKIN 251
E+ G + T L++ + K++ A V E+ K+ PP+ T+N F+ C +
Sbjct: 353 EMRKCGCMPDVSTYKDLIEGMLLVDKLDAAYCVLDEMAKAGFPPDIVTYNCFLKVLCGLQ 412
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
+ D+A + M C P V +Y+ ++ + + + EM +GC V TY
Sbjct: 413 KADDALELCERMIEAHCEPSVHTYNMLMVMFFEMREPDRAINIWIEMDKRGCHRAVDTYE 472
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
T++ L SG E+A + +++ G K + F+ ++ L
Sbjct: 473 TMIDGLFDSGRTEDATTLLDEVINRGMKLSYKKFDAIMLRL 513
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 95/220 (43%), Gaps = 18/220 (8%)
Query: 133 SSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTF 191
+++ Y +M+ L K QM++ L+ EM K G + ++T ++ + + A
Sbjct: 327 TAKTYSIMIAALAKAGQMEECFELISEMRKCGCMPDVSTYKDLIEGMLLVDKLDAAYCVL 386
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-----KSCIPPNAHTFNIFIHG 246
DE+ G + T N L LC K + A LEL ++ P+ HT+N+ +
Sbjct: 387 DEMAKAGFPPDIVTYNCFLKVLCGLQKADDA----LELCERMIEAHCEPSVHTYNMLMVM 442
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
+ ++ D A EM GCH V +Y T+I LLDE+ +G +
Sbjct: 443 FFEMREPDRAINIWIEMDKRGCHRAVDTYETMIDGLFDSGRTEDATTLLDEVINRGMKLS 502
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFN 346
+ +M L+ G+ R++E M+ RF+N
Sbjct: 503 YKKFDAIMLRLSAVGNLGAIHRLSEHMR--------RFYN 534
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 182/369 (49%), Gaps = 8/369 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
G H+ Y ++++ + Q+ A+L +M K G+ + T++ ++ + + + +A
Sbjct: 111 GMPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEA 170
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIH 245
V D++ G + NT T N L+ L K A ++ + K C P+ T+ + ++
Sbjct: 171 VALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGC-QPDLVTYGVVVN 229
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G CK D A + +M+ P V+ Y+TII C+ + L EM+ +G P
Sbjct: 230 GLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRP 289
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
NVVTY++++S L G + +A R+ M PD F+ LI + ++ EA +Y
Sbjct: 290 NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLY 349
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
EM + + P T++++I F H ++A + E M +HC P+V ++ L+K
Sbjct: 350 D-EMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVS-KHCFPDVVSYSTLIKGFC 407
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
K + DE + +L +M ++ L + TYT +I GL +A C+ A +FKEM+ + P
Sbjct: 408 KAKRVDEGM-ELFREM-SQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPN 465
Query: 486 YQTCRLILD 494
T +LD
Sbjct: 466 IMTYNTLLD 474
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 173/362 (47%), Gaps = 39/362 (10%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
IY ++D L K + MD L +EM +KG + T + ++ G+W DA R ++
Sbjct: 258 IYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 317
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRV 253
+ + T + L+D KEGK+ A ++ E+ K I P+ T++ I+G+C +R+
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
DEA+ + M C P V+SYST+I+ +C+ + EL EM +G N VTYTT+
Sbjct: 378 DEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL 437
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA------------ 361
+ L ++GD + A I ++M G P+ +N L+ L + ++++A
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497
Query: 362 ---VYVYQV-------------------EMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
+Y Y + + GV PD +NTMI+ F G E+A
Sbjct: 498 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADA 557
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIH 459
+ +EM K + PN ++ L+++ + G E ++L+ +M + D +T LV +
Sbjct: 558 LFKEM-KEDGTLPNSGCYNTLIRARLRDGDR-EASAELIKEM-RSCGFAGDASTIGLVTN 614
Query: 460 GL 461
L
Sbjct: 615 ML 616
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 172/358 (48%), Gaps = 6/358 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
GY+ ++ + ++ L + + AL++ M +KG L T V+ G + A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHG 246
+++ LE ++D LCK ++ A ++F E+++ I PN T++ I
Sbjct: 241 FILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C R +A + +M +P V ++S +I ++ ++ + +L DEM + P+
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
+VTY+++++ +EA ++ E M PD ++ LI +A RV E + +++
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFR 420
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
EM + G+ +T T+ T+I G + A + +EM + PN+ T++ LL K
Sbjct: 421 -EMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVS-DGVPPNIMTYNTLLDGLCK 478
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
GK ++ + ++ + + + + I TY ++I G+C+A K E + LF + + P
Sbjct: 479 NGKLEKAM--VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKP 534
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 150/319 (47%), Gaps = 15/319 (4%)
Query: 35 IVSSSPIESYCSDGARLDHHQVLC--VDSPRLPDIDVIISKVHVGSSEDEVFQS--LKQD 90
+ SS I C+ G D ++L ++ PD+ + + E ++ ++ L +
Sbjct: 292 VTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDE 351
Query: 91 HVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVR 148
V +I PS + LI+ F D A +F + S + Y ++ K +
Sbjct: 352 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVS-YSTLIKGFCKAK 410
Query: 149 QMDQMRALLEEMSK----GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTE 204
++D+ L EMS+ G+ VT T+ + + + AG + A F E+ + G+ N
Sbjct: 411 RVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQ---AGDCDMAQEIFKEMVSDGVPPNIM 467
Query: 205 TMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
T N LLD LCK GK+E A VF L +S + P +T+NI I G CK +V++ +
Sbjct: 468 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNL 527
Query: 264 KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF 323
G P V++Y+T+I +CR+ + + L EM+ G PN Y T++ + GD
Sbjct: 528 SLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDR 587
Query: 324 EEAIRITEKMKIVGSKPDS 342
E + + ++M+ G D+
Sbjct: 588 EASAELIKEMRSCGFAGDA 606
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 143/303 (47%), Gaps = 10/303 (3%)
Query: 216 EGKVELARSVFLELKSCIP-PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVIS 274
E K++ A ++F E+ P P+ F+ + K+N+ D ++M+ G +
Sbjct: 59 ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYT 118
Query: 275 YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
YS +I +CR+ +L +M G PN+VT +++++ S EA+ + ++M
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178
Query: 335 IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHH 394
+ G +P++ FN LI+ L ++ EAV + M G PD T+ ++ G
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAVALID-RMVAKGCQPDLVTYGVVVNGLCKRGDT 237
Query: 395 EKAFHVLEEMNKLEHCK--PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
+ AF +L NK+E K P V + ++ K D+ L+ L +M K + ++
Sbjct: 238 DLAFILL---NKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALN-LFKEMETK-GIRPNVV 292
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE-VKQKHMYDAAEKIEAV 511
TY+ +I LC + A L +MI I P T ++D VK+ + +A + + +
Sbjct: 293 TYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 512 MKK 514
+K+
Sbjct: 353 VKR 355
>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 178/356 (50%), Gaps = 6/356 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
G S Y +V L KV++ + +++EM + G + T ++ ++ G+ DA
Sbjct: 291 GLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDA 350
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHG 246
+ + G + N L+++LCK+GK + A +F E+ + + N T++I I
Sbjct: 351 FDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDS 410
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
+C+ ++D A + +M G V Y+++I +C+ N S DEM +G P
Sbjct: 411 FCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPT 470
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
VV+YT+++S G EA R+ +M G P++ F LI L RA+R+ +A ++
Sbjct: 471 VVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFD 530
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
EM E + P+ T+N MI G+ KAF +L +M + + P+ T+ PL+ S
Sbjct: 531 -EMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQ-KGLVPDTYTYRPLISSLCS 588
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
TG+ E + +DD+ ++ H L+ Y+ ++HG C+ + A + +EM+ +
Sbjct: 589 TGRVCEA-KKFIDDL-HREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGV 642
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 103/421 (24%), Positives = 196/421 (46%), Gaps = 9/421 (2%)
Query: 98 PSHYLVNKLIHRFKDDWK--SALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRA 155
PS ++ N LI+ D K A +F+ G G + Y +++D + ++D
Sbjct: 364 PSLFVYNALINSLCKDGKFDEAELLFKEMGE-KGLCANDVTYSILIDSFCRRGKLDTAIH 422
Query: 156 LLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLC 214
L +M I +T+ ++ G AV FDE+ GL+ + L+ C
Sbjct: 423 FLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYC 482
Query: 215 KEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI 273
+GK+ A ++ E+ I PN +TF I + NR+ +A EM P +
Sbjct: 483 NKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEV 542
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
+Y+ +I+ +C++ N K +ELL++M +G P+ TY ++S L +G EA + + +
Sbjct: 543 TYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDL 602
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
K + ++ L++ + R+++A+ V + EM + GV D + +I
Sbjct: 603 HREHFKLNEMCYSALLHGYCKEGRLRDALGVCR-EMVKRGVDMDLVCYAVLIDGTIKEQD 661
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
F +L+ M+ + +P+ + ++ K G + + D M+++ + +I T
Sbjct: 662 TSAVFGLLKNMHD-QRLRPDKVIYTSMIDGYSKAGSVKKAFG-IWDIMIDEG-CTPNIVT 718
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
YT +I+ LC+A + A LL+KEM+ + TP + T LD + ++ + A ++ M
Sbjct: 719 YTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDML 778
Query: 514 K 514
K
Sbjct: 779 K 779
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 177/399 (44%), Gaps = 46/399 (11%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAV 188
G ++ + ++ L + +M L +EM + +++ VM G + + V
Sbjct: 501 GIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVM--IEGHCKEGNTV 558
Query: 189 RTFDELGTF---GLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFI 244
+ F+ L GL +T T L+ +LC G+V A+ +L + N ++ +
Sbjct: 559 KAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALL 618
Query: 245 HGWCKINRVDEAQWTIQEMKGHG------CHPCVIS------------------------ 274
HG+CK R+ +A +EM G C+ +I
Sbjct: 619 HGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLR 678
Query: 275 -----YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI 329
Y+++I Y + + K + + D M +GC PN+VTYTT+++ L K+G ++A +
Sbjct: 679 PDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELL 738
Query: 330 TEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFS 389
++M + S P+ + C + L R +++AV ++ + G+ +T ++N ++ F
Sbjct: 739 WKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDML--KGLLANTVSYNILVRGFC 796
Query: 390 HHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSL 449
G E+A +L+EM P+ T+ ++ C + G D + + D M+NK L
Sbjct: 797 KLGRVEEATKLLDEMID-NAIFPDCITYSTIIYQCCRRGNLDGAI-EFWDTMLNK-GLKP 853
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
D Y +I+G C A + A+ L +MI + P T
Sbjct: 854 DTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQAT 892
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/377 (22%), Positives = 149/377 (39%), Gaps = 72/377 (19%)
Query: 207 NLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKG 265
+LL+ + +E ++ + +F ++ C + P T ++G KI RVD E+
Sbjct: 162 DLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEILS 221
Query: 266 HGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA------------------------- 300
G P + Y +I+S+C NF+K E++ M++
Sbjct: 222 MGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDLNVVVYNVLIHGLCKNKRVWEAV 281
Query: 301 --------QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
+G + VTY T++ L K +FE + ++M +G P + L+ L
Sbjct: 282 EIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGL 341
Query: 353 GRASRVQEA---------------VYVYQV-------------------EMPENGVAPDT 378
R +V +A ++VY EM E G+ +
Sbjct: 342 RRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCAND 401
Query: 379 STFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLL 438
T++ +I F G + A H L +M + K V ++ L+ K G +S
Sbjct: 402 VTYSILIDSFCRRGKLDTAIHFLGKM-IMAGIKITVYPYNSLINGHCKLGNLSAAVS-FF 459
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR-YQTCRLILDEVK 497
D+M++K L + +YT +I G C K A+ L+ EM G I P Y LI +
Sbjct: 460 DEMIDK-GLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFR 518
Query: 498 QKHMYDAAEKIEAVMKK 514
M DA + ++++
Sbjct: 519 ANRMTDAFRLFDEMLEQ 535
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/406 (24%), Positives = 194/406 (47%), Gaps = 24/406 (5%)
Query: 128 PGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAK-------------- 173
P ++HSS MV L + R++ + +A + M + V+ + +
Sbjct: 129 PNFKHSSXSLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVKVVESLISTCFYFGSVGL 188
Query: 174 ----VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL 229
++R + A + + F L G+ + N LL L + G V+LA ++ E+
Sbjct: 189 IYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEV 248
Query: 230 -KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
+ I N +T NI ++ CK + + + + +M+G G +++Y+T+I +YCR+
Sbjct: 249 VRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLV 308
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
+ ++LL+ ++G P ++TY ++ L K G ++ A + +M +G P++ +N L
Sbjct: 309 EEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTL 368
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
+ + R + EA ++ EM GV PD +F+++I + + +GH +A EM +
Sbjct: 369 LVEICRRDNILEAQEIFD-EMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMER-S 426
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
P+ + L+ + G + L ++ D+M+ + +D+ TY ++GLC+
Sbjct: 427 GIVPDNVIYTILIDGFCRNGALSDAL-KMRDEMLARGCF-MDVVTYNTFLNGLCKKKMFA 484
Query: 469 WAYLLFKEMIGHDITPRYQT-CRLILDEVKQKHMYDAAEKIEAVMK 513
A +LF EM+ + P + T LI K +M A EA+++
Sbjct: 485 DADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVR 530
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/419 (24%), Positives = 191/419 (45%), Gaps = 46/419 (10%)
Query: 126 SCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK----GHIVTLNTI-AKVMRRFSG 180
S G E Y ++ L K+ + D+ + +L EM + + T NT+ ++ RR
Sbjct: 319 SSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRR--- 375
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHT 239
+A FDE+ G+ + + + L+ L + G + A F E+ +S I P+
Sbjct: 376 -DNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVI 434
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+ I I G+C+ + +A EM GC V++Y+T + C++ F+ L +EM
Sbjct: 435 YTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMV 494
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
+G P+ T+TT++ K G+ ++A+ + E M KPD +N LI +A +
Sbjct: 495 ERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMG 554
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
A ++ +M + PD ++ T++ F G +A ++ ++M + + +PN+ T +
Sbjct: 555 RAKELWD-DMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLE-KGIRPNLVTCNT 612
Query: 420 LLKSCFKTG---KTDECLSQLLDD---------------------------MVN---KHH 446
L+K ++G K E LS+++ + ++N K
Sbjct: 613 LIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRG 672
Query: 447 LSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT-CRLILDEVKQKHMYDA 504
L +I TY L+++G C K + A + ++MI I P T LI V Q +M +A
Sbjct: 673 LQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEA 731
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 161/346 (46%), Gaps = 6/346 (1%)
Query: 64 LPDIDVIISKVHVGSSEDEVFQSLK--QDHVCNAIQPSHYLVNKLIHRF-KDDWKSALGI 120
LPD+ S + V + ++Q+L ++ + I P + + LI F ++ S
Sbjct: 394 LPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALK 453
Query: 121 FRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFS 179
R G Y ++ L K + L EM +G + T ++R +
Sbjct: 454 MRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYC 513
Query: 180 GAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAH 238
G + A+ F+ + L+ + T N L+D CK G++ A+ ++ ++ + I P+
Sbjct: 514 KDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHI 573
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
++ ++G+C + EA +M G P +++ +T+I+ YCR + K YE L +M
Sbjct: 574 SYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKM 633
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRV 358
+ G P+ +Y T++ K + E+A + +M+ G + + +N ++ ++
Sbjct: 634 ISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKM 693
Query: 359 QEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
QEA V + +M E G+ PD +T++++I + ++AF +EM
Sbjct: 694 QEAEQVLR-KMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEM 738
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 144/319 (45%), Gaps = 9/319 (2%)
Query: 34 HIVSSSPIESYCSDGARLDHHQVLCVDSPRLPDIDVIISKVHV-GSSEDEVFQS---LKQ 89
+++ + I+ +C +GA D ++ R +DV+ + G + ++F L
Sbjct: 432 NVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFN 491
Query: 90 DHVCNAIQPSHYLVNKLIHRFKDDWK--SALGIFRWAGSCPGYEHSSEIYEMMVDILGKV 147
+ V + P Y LI + D AL +F A + Y ++D K
Sbjct: 492 EMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFE-AMVRTNLKPDKVTYNTLIDGFCKA 550
Query: 148 RQMDQMRALLEEMSKGHIVTLN-TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETM 206
+M + + L ++M + I+ + + V+ F +G +A+ D++ G+ N T
Sbjct: 551 GEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTC 610
Query: 207 NLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKG 265
N L+ C+ G + A ++ S I P++ ++N I G+ K +++A I EM+
Sbjct: 611 NTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEK 670
Query: 266 HGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEE 325
G +I+Y+ I+ +C + + ++L +M G P+ TY+++++ + +E
Sbjct: 671 RGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKE 730
Query: 326 AIRITEKMKIVGSKPDSRF 344
A R ++M G PD RF
Sbjct: 731 AFRFHDEMLQRGLVPDDRF 749
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 75/171 (43%), Gaps = 4/171 (2%)
Query: 345 FNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
++ L+ T +A +++E +Q+ + GV+ + N ++ G + A+ + E+
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQI-LRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEV 248
Query: 405 NKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRA 464
+ + NV T + ++ + K K + + L DM K + DI TY +I+ CR
Sbjct: 249 VR-GGIELNVYTLNIMVNALCKDRKFENVMF-FLSDMEGKGVFA-DIVTYNTLINAYCRE 305
Query: 465 NKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
E A+ L + P T IL + + YD A+ + M +L
Sbjct: 306 GLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQL 356
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 191/382 (50%), Gaps = 8/382 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEE-MSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++D K + + LL++ + KG + T ++ G E A+ F+E
Sbjct: 318 YNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQ 377
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRV 253
L+ + N L+ LC++G + A V E+ + C P+ T+NI I+G CK+ +
Sbjct: 378 AKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGC-HPDIWTYNIIINGLCKMGNI 436
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
+A + + G P V +++T+I YC++ +L++ M G P+V+TY +V
Sbjct: 437 SDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSV 496
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
++ L K+G +E E+M + G +P++ +N LI + ++++EA V V M ++G
Sbjct: 497 LNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVI-VRMCQDG 555
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
+ PD +FNT+I F +G + A+ + +++++ + TF+ L+ + + + +
Sbjct: 556 LVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGY-SATADTFNILIGA-YSSKLNMQM 613
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
++ +M++K + D+ TY +++ GLC+A + AY EMI P T +L
Sbjct: 614 AEKIFGEMISKGY-KPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRML 672
Query: 494 DEVKQKHMYDAAEKIEAVMKKL 515
+ + H A I +M ++
Sbjct: 673 NLLAMNHRVSEAVAIIHIMVRM 694
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 151/297 (50%), Gaps = 4/297 (1%)
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQ 257
G+ N T N+ + LC++G++E A ++ + + + P+ T+N + G CK ++V EA
Sbjct: 241 GMSANKFTCNIWIRGLCEDGRLEEAVALVERMGAYVAPDVVTYNTLMRGLCKDSKVQEAA 300
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
+ M GC P +Y+TII YC+ + ELL + +G P+ VTY ++++ L
Sbjct: 301 QYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGL 360
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
GD E A+ + + + KPD +N L+ L R + A+ V EM E G PD
Sbjct: 361 CAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMN-EMVEEGCHPD 419
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
T+N +I G+ A V+ + ++ P+V TF+ L+ K K D L QL
Sbjct: 420 IWTYNIIINGLCKMGNISDAAVVMNDA-IVKGYLPDVFTFNTLIDGYCKRLKLDSAL-QL 477
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
++ M + ++ D+ TY V++GLC+A K + F+EMI P T ++++
Sbjct: 478 VERMWT-YGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIE 533
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 164/354 (46%), Gaps = 11/354 (3%)
Query: 162 KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVEL 221
K +V N++ K + R G A++ +E+ G + T N++++ LCK G +
Sbjct: 382 KPDLVVYNSLVKGLCR---QGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISD 438
Query: 222 ARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQ 280
A V + + P+ TFN I G+CK ++D A ++ M +G P VI+Y++++
Sbjct: 439 AAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLN 498
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
C+ +V E +EM +GC PN +TY ++ K EEA + +M G P
Sbjct: 499 GLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVP 558
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
D+ FN LI+ R + A ++Q ++ E G + TFN +I +S + + A +
Sbjct: 559 DAVSFNTLIHGFCRNGDLDGAYLLFQ-KLDEKGYSATADTFNILIGAYSSKLNMQMAEKI 617
Query: 401 LEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHG 460
EM + KP++ T+ L+ K D + L +M++K + + T+ +++
Sbjct: 618 FGEMISKGY-KPDLYTYRILVDGLCKAANVDRAYAHLA-EMISKGFVP-SMATFGRMLNL 674
Query: 461 LCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
L ++ A + M+ + P L D +K + +E +MKK
Sbjct: 675 LAMNHRVSEAVAIIHIMVRMGVVPEVVDTILSTD---KKEIAAPKILVEELMKK 725
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 160/369 (43%), Gaps = 17/369 (4%)
Query: 127 CPGYEHSSEI-------YEMMVDILGKVRQMDQMRALLEEMSKGHIV--TLNTI-AKVMR 176
CP E SSE+ Y ++ L ++D + A L ++ H+ +L + ++
Sbjct: 21 CPHAEPSSELTASTIPAYRALIRELVSAGRLDDVDAALAS-ARSHLAPDSLQPLYVASIQ 79
Query: 177 RFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPP 235
++ AG+ AV F+ + F N ++D L + A V++ L + + P
Sbjct: 80 AYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAP 139
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
+A T + + +C R A ++ + GC +Y T+++ + L
Sbjct: 140 DARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLF 199
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
DEM + P+V T+ V+ L + GD E+ + K+ G + N I L
Sbjct: 200 DEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCED 259
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQ 415
R++EAV + VE VAPD T+NT++ ++A L M + C P+
Sbjct: 260 GRLEEAVAL--VERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMN-QGCIPDDF 316
Query: 416 TFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFK 475
T++ ++ K+G E ++LL D V K + D TY +I+GLC E A LF
Sbjct: 317 TYNTIIDGYCKSGMLQEA-TELLKDAVFKGFVP-DRVTYCSLINGLCAEGDIERALELFN 374
Query: 476 EMIGHDITP 484
E D+ P
Sbjct: 375 EAQAKDLKP 383
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/318 (20%), Positives = 117/318 (36%), Gaps = 41/318 (12%)
Query: 231 SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVIS-YSTIIQSYCRQYNFS 289
S IP + I R+D+ + + H + Y IQ+Y R
Sbjct: 33 STIP----AYRALIRELVSAGRLDDVDAALASARSHLAPDSLQPLYVASIQAYARAGRLR 88
Query: 290 KVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
+ + M CPP Y +M L + ++A ++ +M G PD+R +
Sbjct: 89 AAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRL 148
Query: 350 YTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH 409
+ R A+ + + + E G + + T++ HGH A H+ +EM +
Sbjct: 149 KSFCLTGRPHVALRLLR-SLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRD- 206
Query: 410 CKPNVQTFHPLLKSCFKTGKTDE---------------------------CLSQLLDDMV 442
P+V TF+ +L + + G E C L++ V
Sbjct: 207 VFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAV 266
Query: 443 N-----KHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVK 497
+++ D+ TY ++ GLC+ +K + A M+ P T I+D
Sbjct: 267 ALVERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYC 326
Query: 498 QKHMYDAAEKI--EAVMK 513
+ M A ++ +AV K
Sbjct: 327 KSGMLQEATELLKDAVFK 344
>gi|255660874|gb|ACU25606.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 484
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 196/390 (50%), Gaps = 16/390 (4%)
Query: 100 HYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEE 159
H LV ++H K + AL FRW +EH+ E + +++ILG+ +++ R +L +
Sbjct: 12 HELVYNVLHSSKTS-EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLD 70
Query: 160 M-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
M KG + ++ + G +++V+ F ++ G+E+ ++ N L + + G+
Sbjct: 71 MPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGR 130
Query: 219 VELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
+A+ F ++ S I P HTFN+ I G+ +V+ A ++MK P V++Y+T
Sbjct: 131 YMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNT 190
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+I Y R + + EM+ + P VVTYTT++ ++A+R+ E+MK G
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFG 250
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP-DTSTFNTMITMFSHHGHHEK 396
KP++ ++ L+ L A ++ EA + + EM + +AP D S F +I+ G+ +
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMSEARVILK-EMMDKYLAPTDNSIFLRLISSHCKSGNLDA 309
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCF-KTGKTDECLSQLLDDMVNK-------HHLS 448
A VL+ M +L P + +L F K G+ D+ + +LLD ++ K L
Sbjct: 310 AADVLKAMIRL--SVPTEAGHYGILIENFCKAGQYDKAV-KLLDKLIEKDIILRPQSTLH 366
Query: 449 LDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
L+ + Y L+I LC + A L ++++
Sbjct: 367 LEPSAYNLMIEYLCNNGQASKAETLVRQLM 396
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 134/311 (43%), Gaps = 4/311 (1%)
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQ 257
E N ET +++ L + K+ AR + L++ K + + + + I + K V E+
Sbjct: 41 FEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESV 100
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
Q+M+ G + SY+ + + R+ + ++M ++G P T+ ++
Sbjct: 101 KMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGF 160
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
SG E A R E MK PD +N +I R +++EA Y VEM + P
Sbjct: 161 FLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEK-YFVEMKGRNIEPT 219
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
T+ T+I + + A ++EEM KPN T+ LL K E +
Sbjct: 220 VVTYTTLIKGYVSVDQVDDALRLVEEMKGF-GIKPNAITYSTLLPGLCNAEKMSEA-RVI 277
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVK 497
L +M++K+ D + + +I C++ + A + K MI + ++++
Sbjct: 278 LKEMMDKYLAPTDNSIFLRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGILIENFC 337
Query: 498 QKHMYDAAEKI 508
+ YD A K+
Sbjct: 338 KAGQYDKAVKL 348
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 127/267 (47%), Gaps = 6/267 (2%)
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
+ ++++ A+ + +M G + +I SY ++ + ++ +M+ G +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIK 116
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
+Y + + + G + A R KM G +P FN +I+ + +V+ A ++ +
Sbjct: 117 SYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFE-D 175
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M ++PD T+NTMI + E+A EM K + +P V T+ L+K
Sbjct: 176 MKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEM-KGRNIEPTVVTYTTLIKGYVSVD 234
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ D+ L +L+++M + + TY+ ++ GLC A K A ++ KEM+ + P +
Sbjct: 235 QVDDAL-RLVEEM-KGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNS 292
Query: 489 --CRLILDEVKQKHMYDAAEKIEAVMK 513
RLI K ++ AA+ ++A+++
Sbjct: 293 IFLRLISSHCKSGNLDAAADVLKAMIR 319
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 5/205 (2%)
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N T+ ++ L ++ A I M G + D + +I + G+ VQE+V ++
Sbjct: 44 NRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMF 103
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
Q +M E GV ++N + + G + A +M E +P TF+ ++ F
Sbjct: 104 Q-KMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLS-EGIEPTRHTFNVMIWGFF 161
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
+GK E ++ +DM ++ +S D+ TY +I+G R K E A F EM G +I P
Sbjct: 162 LSGKV-ETANRFFEDMKSRE-ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPT 219
Query: 486 YQT-CRLILDEVKQKHMYDAAEKIE 509
T LI V + DA +E
Sbjct: 220 VVTYTTLIKGYVSVDQVDDALRLVE 244
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 63/154 (40%), Gaps = 12/154 (7%)
Query: 174 VMRRFSGAGQWEDAVRTFDEL----------GTFGLEKNTETMNLLLDTLCKEGKVELAR 223
++ F AGQ++ AV+ D+L T LE + NL+++ LC G+ A
Sbjct: 332 LIENFCKAGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSA--YNLMIEYLCNNGQASKAE 389
Query: 224 SVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYC 283
++ +L + N I G + D A ++ M +Y++++QSY
Sbjct: 390 TLVRQLMKLGVQDPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSYL 449
Query: 284 RQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
++ LD M P+ + +VM L
Sbjct: 450 KKNEPXDAKAALDSMIENDHLPDSALFRSVMESL 483
Score = 39.3 bits (90), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 68/345 (19%), Positives = 123/345 (35%), Gaps = 87/345 (25%)
Query: 92 VCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEI--YEMMVDILGKVRQ 149
+ I+P+ + N +I F K R+ E S ++ Y M++ +V++
Sbjct: 142 LSEGIEPTRHTFNVMIWGFFLSGKVETA-NRFFEDMKSREISPDVVTYNTMINGYYRVKK 200
Query: 150 MDQMRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNL 208
M++ EM +I T+ T +++ + Q +DA+R +E+ FG++ N T +
Sbjct: 201 MEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYST 260
Query: 209 LLDTLCKEGKVELAR----------------SVFLELKSC-------------------- 232
LL LC K+ AR S+FL L S
Sbjct: 261 LLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFLRLISSHCKSGNLDAAADVLKAMIRL 320
Query: 233 -IPPNAHTFNIFIHGWCKINRVDEA----------------QWTI--------------- 260
+P A + I I +CK + D+A Q T+
Sbjct: 321 SVPTEAGHYGILIENFCKAGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAYNLMIEYLC 380
Query: 261 -------------QEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
Q MK P ++ T+I+ + ++ + +ELL M +
Sbjct: 381 NNGQASKAETLVRQLMKLGVQDPTALN--TLIRGHSQEGSPDSAFELLKIMLRRKVDSEK 438
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
Y +++ K + +A + M PDS F ++ +L
Sbjct: 439 SAYNSLVQSYLKKNEPXDAKAALDSMIENDHLPDSALFRSVMESL 483
>gi|147865347|emb|CAN84084.1| hypothetical protein VITISV_018999 [Vitis vinifera]
Length = 561
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/413 (25%), Positives = 189/413 (45%), Gaps = 11/413 (2%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS 161
+V+++ +R ++ + F WA P + Y +++ LG+ + ++ +L++M
Sbjct: 134 IVSEVXNRGNLGGEAMVXFFNWAVKQPTIPKDVDTYNVIIKALGRRKFIEFXVXVLKDMH 193
Query: 162 -KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVE 220
+G T++ VM F A Q A+ F L FG + +TE++N+LL LC+ V
Sbjct: 194 IQGISPNYETLSIVMDSFIKARQVSKAIEMFRNLEEFGGKCDTESLNVLLQCLCQRSHVG 253
Query: 221 LARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQ 280
A F +K IP N T+NI I GW K ++ E + ++ M G P +++S +I+
Sbjct: 254 AANLFFNAMKGGIPFNCMTYNIIIGGWSKYGKIGEMERCLKAMVADGFSPNCLTFSHLIE 313
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
R E+ M+ GC PN Y ++S + DF+E ++ M P
Sbjct: 314 GLGRAGRIDDAVEVFHHMEETGCVPNACVYNALISNFISTRDFDECLKYYNFMVSSNCDP 373
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
+ + LI +A +V +A+ + EM G+ P T + I +G A +
Sbjct: 374 NMDTYTKLIVAFLKARKVADALEMLD-EMVGRGMIPTTGAITSFIEPLCQYGPPHAAMMI 432
Query: 401 LEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHG 460
++ K+ C+ ++ + LL + GK L+ L D+M + S D Y VI+G
Sbjct: 433 YKKARKV-GCRISLSAYKLLLMRLSRFGKCGMLLN-LWDEMQESGY-SSDTEVYEYVING 489
Query: 461 LCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
LC + + A L+ +E + P RLI ++ K + A+ K+E K
Sbjct: 490 LCNIGQLDTAVLVMEESLXKGFCP----SRLIRSKLNNKLL--ASNKVEMAYK 536
Score = 42.0 bits (97), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 94/258 (36%), Gaps = 40/258 (15%)
Query: 145 GKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTE 204
GK+ +M+ R L ++ G T + ++ AG+ +DAV F + G N
Sbjct: 284 GKIGEME--RCLKAMVADGFSPNCLTFSHLIEGLGRAGRIDDAVEVFHHMEETGCVPNAC 341
Query: 205 TMNLLLDTLCKEGKVE--LARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQE 262
N L+ + L F+ +C PN T+ I + K +V +A + E
Sbjct: 342 VYNALISNFISTRDFDECLKYYNFMVSSNC-DPNMDTYTKLIVAFLKARKVADALEMLDE 400
Query: 263 MKGHGCHPCVISYSTIIQSYC--------------------------------RQYNFSK 290
M G G P + ++ I+ C R F K
Sbjct: 401 MVGRGMIPTTGAITSFIEPLCQYGPPHAAMMIYKKARKVGCRISLSAYKLLLMRLSRFGK 460
Query: 291 ---VYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNC 347
+ L DEMQ G + Y V++ L G + A+ + E+ G P +
Sbjct: 461 CGMLLNLWDEMQESGYSSDTEVYEYVINGLCNIGQLDTAVLVMEESLXKGFCPSRLIRSK 520
Query: 348 LIYTLGRASRVQEAVYVY 365
L L +++V+ A ++
Sbjct: 521 LNNKLLASNKVEMAYKLF 538
>gi|449456681|ref|XP_004146077.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Cucumis sativus]
Length = 527
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/378 (26%), Positives = 183/378 (48%), Gaps = 17/378 (4%)
Query: 130 YEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKG------HIVTLNTIAKVMRRFSGAGQ 183
+ +S Y++++ LG+ + D+M +L+++ + ++ N IA F G
Sbjct: 111 FRYSLLSYDLIISKLGRAKMFDEMEEILQQLKQETRFAPHEVIFCNVIA-----FYGRAH 165
Query: 184 WED-AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNI 242
D A + F+ + +F ++ +++N LL L K ++E VF+++ + P+A TFNI
Sbjct: 166 LPDRAFQVFERIPSFRCKRTVKSVNSLLAALLKNRQLEKMTQVFVDISNYGSPDACTFNI 225
Query: 243 FIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM-QAQ 301
IH C +D EM+ G P V+++ T+I + L ++M +
Sbjct: 226 LIHAACLCGDLDAVWGVFDEMQKRGVKPNVVTFGTLIYGLSLNSKLKEALRLKEDMVKVY 285
Query: 302 GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
PN YTT++ G+ A ++ E+M K S ++ LI L + R +E
Sbjct: 286 MIKPNASIYTTLIKGFCGVGELNFAFKLKEEMVTSNVKLVSAVYSTLISALFKHGRKEEV 345
Query: 362 VYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLL 421
+ + EM ENG PDT T+N +I E A V++EM + + CKP+V +F+ ++
Sbjct: 346 SDILR-EMGENGCKPDTVTYNAIINGHCKENDLESAHRVMDEMVE-KGCKPDVFSFNTII 403
Query: 422 KSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHD 481
K GK D+ + LL+DM + D+ +Y ++ GLC + + A + EMI
Sbjct: 404 GWLCKEGKLDKAM-DLLEDM-PRRGCPPDVLSYRIIFDGLCEMMQLKEATSILDEMIFKG 461
Query: 482 ITPRYQTCRLILDEVKQK 499
PR ++ ++D + Q+
Sbjct: 462 YVPRNESINKLVDRLCQE 479
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 153/391 (39%), Gaps = 67/391 (17%)
Query: 68 DVIISKVHVGSSEDE---VFQSLKQDH--------VCNAIQPSHYLVNKLIHRFKDDWKS 116
D+IISK+ DE + Q LKQ+ CN I + Y L R
Sbjct: 119 DLIISKLGRAKMFDEMEEILQQLKQETRFAPHEVIFCNVI--AFYGRAHLPDR------- 169
Query: 117 ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMR 176
A +F S + ++ +L K RQ+++M + ++S T ++
Sbjct: 170 AFQVFERIPSFRCKRTVKSVNSLLAALL-KNRQLEKMTQVFVDISNYGSPDACTFNILIH 228
Query: 177 RFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS----- 231
G + FDE+ G++ N T L+ L K++ A L LK
Sbjct: 229 AACLCGDLDAVWGVFDEMQKRGVKPNVVTFGTLIYGLSLNSKLKEA----LRLKEDMVKV 284
Query: 232 -CIPPNAHTFNIFIHGWCKIN-----------------------------------RVDE 255
I PNA + I G+C + R +E
Sbjct: 285 YMIKPNASIYTTLIKGFCGVGELNFAFKLKEEMVTSNVKLVSAVYSTLISALFKHGRKEE 344
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
++EM +GC P ++Y+ II +C++ + + ++DEM +GC P+V ++ T++
Sbjct: 345 VSDILREMGENGCKPDTVTYNAIINGHCKENDLESAHRVMDEMVEKGCKPDVFSFNTIIG 404
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
+L K G ++A+ + E M G PD + + L +++EA + EM G
Sbjct: 405 WLCKEGKLDKAMDLLEDMPRRGCPPDVLSYRIIFDGLCEMMQLKEATSILD-EMIFKGYV 463
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNK 406
P + N ++ + E + +L + +
Sbjct: 464 PRNESINKLVDRLCQECNMELLWMILNSLGR 494
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 162/317 (51%), Gaps = 15/317 (4%)
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-C 232
++R F G+ + + F E+ G N T N L+D CK G+++ A + + S
Sbjct: 16 LIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKG 75
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
+ PN ++N+ I+G C+ + EA ++EM G P ++Y+T++ YC++ NF +
Sbjct: 76 MQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQAL 135
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
+ EM G P+VVTYT +++ + K+ + A+ ++M+I G +P+ R + LI
Sbjct: 136 VIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGF 195
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH-----HEKAFHVLEEMNKL 407
R + EA + EM E+G +P T+N I HGH E+A V++EM +
Sbjct: 196 SRQGLLNEAYRILN-EMTESGFSPSVVTYNAFI-----HGHCVLERMEEALGVVQEMVE- 248
Query: 408 EHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKC 467
+ P+V ++ ++ + G+ D Q+ +MV K +S D TY+ +I GLC +
Sbjct: 249 KGLAPDVVSYSTIISGFCRKGELDRAF-QMKQEMVEK-GVSPDAVTYSSLIQGLCEMRRL 306
Query: 468 EWAYLLFKEMIGHDITP 484
A L +EM+ + P
Sbjct: 307 TEACDLSQEMLDMGLPP 323
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 144/284 (50%), Gaps = 4/284 (1%)
Query: 229 LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
++S + PN +T+NI I G+C + + + EM+ +GC P V++Y+T+I +YC+
Sbjct: 2 IRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRI 61
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
+ + LL M ++G PN+++Y +++ L + G +EA I E+M G PD +N L
Sbjct: 62 DEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTL 121
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
+ + +A+ ++ EM NGV+P T+ +I + +A ++M ++
Sbjct: 122 LNGYCKEGNFHQALVIH-AEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQM-RIR 179
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
+PN +T+ L+ + G +E ++L++M + S + TY IHG C + E
Sbjct: 180 GLRPNERTYTTLIDGFSRQGLLNEAY-RILNEMT-ESGFSPSVVTYNAFIHGHCVLERME 237
Query: 469 WAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
A + +EM+ + P + I+ +K D A +++ M
Sbjct: 238 EALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEM 281
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 112/447 (25%), Positives = 202/447 (45%), Gaps = 25/447 (5%)
Query: 81 DEVFQSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYE 138
DE F LK +QP+ N +I+ + K A I G G+ Y
Sbjct: 62 DEAFGLLKS-MSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGY-KGFTPDEVTYN 119
Query: 139 MMVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDAVRTFDELGTF 197
+++ K Q + EM + + ++ T ++ A A+ FD++
Sbjct: 120 TLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIR 179
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEA 256
GL N T L+D ++G + A + E+ +S P+ T+N FIHG C + R++EA
Sbjct: 180 GLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEA 239
Query: 257 QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSY 316
+QEM G P V+SYSTII +CR+ + +++ EM +G P+ VTY++++
Sbjct: 240 LGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQG 299
Query: 317 LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
L + EA ++++M +G PD + LI + +A++++ EM G P
Sbjct: 300 LCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHD-EMIHKGFLP 358
Query: 377 DTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC----FKT----- 427
D T++ +I + +A +L ++ E P+ T+ L+++C FK+
Sbjct: 359 DAVTYSVLINGLNKQARTREAKRLLFKL-IYEESVPSDVTYDTLIENCSNIEFKSVVALI 417
Query: 428 ------GKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHD 481
G E ++ + MV ++H + Y ++IHG CR A+ L+KEMI
Sbjct: 418 KGFCMKGLMHEA-DRVFESMVERNHKPGE-AVYNVIIHGHCRGGNLPKAFNLYKEMIHSG 475
Query: 482 ITPRYQTCRLILDEVKQKHMYDAAEKI 508
P T ++ + ++ M + ++
Sbjct: 476 FVPHTVTVITLIKALFKEGMNEEMSEV 502
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 141/343 (41%), Gaps = 67/343 (19%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKG----HIVTLNTIAK---VMRRFSGA 181
G + Y ++D + +++ +L EM++ +VT N V+ R
Sbjct: 180 GLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERM--- 236
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTF 240
E+A+ E+ GL + + + ++ C++G+++ A + E+ + + P+A T+
Sbjct: 237 ---EEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTY 293
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
+ I G C++ R+ EA QEM G P +Y+T+I +YC + + +K L DEM
Sbjct: 294 SSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIH 353
Query: 301 QGCPPNVVTYTTVMSYLAKS---------------------------------------- 320
+G P+ VTY+ +++ L K
Sbjct: 354 KGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSV 413
Query: 321 ----------GDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
G EA R+ E M KP +N +I+ R + +A +Y+ EM
Sbjct: 414 VALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYK-EMI 472
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPN 413
+G P T T T+I G +E+ V+ + L C+ N
Sbjct: 473 HSGFVPHTVTVITLIKALFKEGMNEEMSEVIGD--TLRSCRLN 513
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 70/141 (49%), Gaps = 3/141 (2%)
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
V+P+ T+N +I F G +K EM + C PNV T++ L+ + K G+ DE
Sbjct: 6 VSPNVYTYNILIRGFCSVGELQKGLGCFGEMER-NGCLPNVVTYNTLIDAYCKMGRIDEA 64
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
LL M +K + ++ +Y ++I+GLCR + A+ + +EM TP T +L
Sbjct: 65 FG-LLKSMSSK-GMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLL 122
Query: 494 DEVKQKHMYDAAEKIEAVMKK 514
+ ++ + A I A M +
Sbjct: 123 NGYCKEGNFHQALVIHAEMVR 143
>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
Length = 897
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 193/409 (47%), Gaps = 40/409 (9%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
+Y+ ++ L + + LL EM G +NT V+R G G+ +A R D +
Sbjct: 196 LYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRM 255
Query: 195 GTFGLEKNTETMNLLLDTLCK-------------------------------EGKVELAR 223
T G T LL LC+ EGK+ A
Sbjct: 256 MTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEAT 315
Query: 224 SVF--LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQS 281
++ + LK C P+AHT++I +HG CK+ R+ A ++EM+ G P V++Y+ ++ S
Sbjct: 316 ELYETMGLKGC-QPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHS 374
Query: 282 YCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPD 341
+C+ + LL+EM A+G N Y ++ L K G +EA+ + ++M+ G PD
Sbjct: 375 FCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPD 434
Query: 342 SRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVL 401
+N +IY L +++EA ++++ + E GV + T+NT+I G + A +
Sbjct: 435 ICSYNTIIYHLCNNEQMEEAEHMFE-NLLEEGVVANGITYNTIIHALLRDGRWQDAVRLA 493
Query: 402 EEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGL 461
+EM L C +V +++ L+K+ K G D L LL++M K + + +Y ++I L
Sbjct: 494 KEM-ILHGCSLDVVSYNGLIKAMCKDGNVDRSLV-LLEEMAEK-GIKPNNVSYNILISEL 550
Query: 462 CRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIE 509
C+ + A L K+M+ + P T +++ + K M+ A +E
Sbjct: 551 CKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLE 599
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 193/381 (50%), Gaps = 9/381 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGT 196
Y ++ L +VRQ D+ RA+L + + ++V NT V+ G+ +A ++ +G
Sbjct: 267 YGFLLQGLCRVRQADEARAMLGRVPELNVVLFNT---VIGGCLAEGKLAEATELYETMGL 323
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDE 255
G + + T ++L+ LCK G++ A + E+ K PN T+ I +H +CK D+
Sbjct: 324 KGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDD 383
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
+ ++EM G Y+ +I + C+ + L+ EM++QGC P++ +Y T++
Sbjct: 384 TRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIY 443
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
+L + EEA + E + G + +N +I+ L R R Q+AV + + EM +G +
Sbjct: 444 HLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAK-EMILHGCS 502
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS 435
D ++N +I G+ +++ +LEEM + + KPN +++ L+ K + + L
Sbjct: 503 LDVVSYNGLIKAMCKDGNVDRSLVLLEEMAE-KGIKPNNVSYNILISELCKERRVRDAL- 560
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD- 494
+L M+N+ L+ DI TY +I+GLC+ A L +++ ++ P T +++
Sbjct: 561 ELSKQMLNQG-LAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISW 619
Query: 495 EVKQKHMYDAAEKIEAVMKKL 515
K + + DAA + M +
Sbjct: 620 HCKVRLLDDAAMLLNRAMAAV 640
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 160/314 (50%), Gaps = 12/314 (3%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G + + Y +++ L K+ ++ LL EM KG + T V+ F G W+D
Sbjct: 325 GCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDT 384
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHG 246
+E+ GL N++ N ++ LCK+G+++ A + E++S P+ ++N I+
Sbjct: 385 RALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYH 444
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C +++EA+ + + G I+Y+TII + R + L EM GC +
Sbjct: 445 LCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLD 504
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
VV+Y ++ + K G+ + ++ + E+M G KP++ +N LI L + RV++A+ + +
Sbjct: 505 VVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSK 564
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
+M G+APD T+NT+I G A ++LE+++ E+ P++ T++ L+
Sbjct: 565 -QMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHN-ENVHPDIITYNILI----- 617
Query: 427 TGKTDECLSQLLDD 440
+ C +LLDD
Sbjct: 618 ---SWHCKVRLLDD 628
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 117/251 (46%), Gaps = 8/251 (3%)
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
+PP TF + C++ R DEA ++ M HGC P + Y T+I + C Q ++
Sbjct: 155 VPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAA 214
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
LL+EM GC +V T+ V+ + G EA R+ ++M G P + L+ L
Sbjct: 215 TLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGL 274
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
R + EA + +PE V FNT+I G +A + E M L+ C+P
Sbjct: 275 CRVRQADEARAMLG-RVPELNVV----LFNTVIGGCLAEGKLAEATELYETMG-LKGCQP 328
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
+ T+ L+ K G+ + +LL +M K + ++ TYT+V+H C+ +
Sbjct: 329 DAHTYSILMHGLCKLGRIGSAV-RLLREM-EKKGFAPNVVTYTIVLHSFCKNGMWDDTRA 386
Query: 473 LFKEMIGHDIT 483
L +EM +T
Sbjct: 387 LLEEMSAKGLT 397
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 78/185 (42%), Gaps = 39/185 (21%)
Query: 156 LLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRT------------------------- 190
LLEE + +T NTI + R G+W+DAVR
Sbjct: 461 LLEEGVVANGITYNTIIHALLR---DGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCK 517
Query: 191 ----------FDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHT 239
+E+ G++ N + N+L+ LCKE +V A + + L + P+ T
Sbjct: 518 DGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVT 577
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+N I+G CK+ + A ++++ HP +I+Y+ +I +C+ LL+
Sbjct: 578 YNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAM 637
Query: 300 AQGCP 304
A CP
Sbjct: 638 AAVCP 642
>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
Length = 645
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 173/339 (51%), Gaps = 14/339 (4%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK----GHIVTLNTIAKVMRRFSGAGQW 184
G +Y ++D + K +++ R +L M ++V NT+ ++ A +W
Sbjct: 282 GCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTL---LKGLCSADRW 338
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNI 242
E+A E+ + T N+L+D LC+ G V+ V ++ C+P + T+
Sbjct: 339 EEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMP-DVITYTT 397
Query: 243 FIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
I+G+CK +DEA ++ M GC P +SY+ +++ C + EL+ +M QG
Sbjct: 398 VINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQG 457
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
CPPN VT+ T++++L K G E+AI + ++M + G PD ++ +I LG+A EA+
Sbjct: 458 CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEAL 517
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLK 422
+ V M + G++P+T ++++ + S G K + E + + + ++ ++
Sbjct: 518 ELLNV-MVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQD-TTVRSDAVLYNAVIS 575
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGL 461
S K G+TD + + L MV+ + + +TYT++I GL
Sbjct: 576 SLCKRGETDRAI-EFLAYMVSSGCVP-NESTYTILIRGL 612
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 164/342 (47%), Gaps = 8/342 (2%)
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KS 231
++R G+ DA+ D++ G ++ L+ C+ A V +L +
Sbjct: 117 LVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRG 176
Query: 232 CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM-KGHGCHPCVISYSTIIQSYCRQYNFSK 290
C + N+ + C VDEA ++++ GC P V+SY+ +++ C +
Sbjct: 177 CAL-DVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGH 235
Query: 291 VYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIY 350
V +L++EM A GCPPN+VT++T++ +L ++G FE + +M G PD R + +I
Sbjct: 236 VQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIID 295
Query: 351 TLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHC 410
+ + R++ A + MP G++P+ +NT++ E+A +L EM + C
Sbjct: 296 GVCKEERLEVARGILN-RMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFD-KDC 353
Query: 411 KPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWA 470
+ TF+ L+ + G D + ++L+ M+ +H D+ TYT VI+G C+ + A
Sbjct: 354 PLDDVTFNILVDFLCQNGLVDRVI-EVLEQML-EHGCMPDVITYTTVINGFCKEGLIDEA 411
Query: 471 YLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
+L + M P + ++L + + AE++ + M
Sbjct: 412 VMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQM 453
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 170/383 (44%), Gaps = 8/383 (2%)
Query: 126 SCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWE 185
S P ++ + ++ + + R D + L + +G T + A +
Sbjct: 104 SVPVAPNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFR 163
Query: 186 DAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIP--PNAHTFNIF 243
AV +L G + NL+L +C +G V+ A + +L P+ ++N
Sbjct: 164 GAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAV 223
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
+ G C R Q ++EM GC P ++++ST+I CR F +V+E+ +M GC
Sbjct: 224 LRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGC 283
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
P+V Y T++ + K E A I +M G P+ +N L+ L A R +EA
Sbjct: 284 APDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEG 343
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH-CKPNVQTFHPLLK 422
+ EM + D TFN ++ +G ++ VLE+M LEH C P+V T+ ++
Sbjct: 344 LL-AEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQM--LEHGCMPDVITYTTVIN 400
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
K G DE + LL M + +YT+V+ GLC A + A L +MI
Sbjct: 401 GFCKEGLIDEAV-MLLRSMA-ACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGC 458
Query: 483 TPRYQTCRLILDEVKQKHMYDAA 505
P T +++ + +K + + A
Sbjct: 459 PPNPVTFNTLINFLCKKGLVEQA 481
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 138/302 (45%), Gaps = 15/302 (4%)
Query: 207 NLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
N ++ C+ G++ AR + + + PNA+T+ + C R+ +A + +M
Sbjct: 83 NAMVAGYCRAGQLAAARRLAASVP--VAPNAYTYFPLVRALCARGRIADALAVLDDMARR 140
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
GC P Y +++ CR F +L ++ +GC +V V+ + G +EA
Sbjct: 141 GCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEA 200
Query: 327 IRIT-EKMKIVGSKPDSRFFNCLIYTLGRASR---VQEAVYVYQVEMPENGVAPDTSTFN 382
+R+ + + G +PD +N ++ L A R VQ+ + EM G P+ TF+
Sbjct: 201 VRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLME----EMVAAGCPPNIVTFS 256
Query: 383 TMITMFSHHGHHEKAFHVLEEMNKLEH-CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDM 441
T+I +G E+ V +M EH C P+V+ + ++ K + E +L+ M
Sbjct: 257 TLIGHLCRNGLFERVHEVHAQMA--EHGCAPDVRMYATIIDGVCKEERL-EVARGILNRM 313
Query: 442 VNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHM 501
+ LS ++ Y ++ GLC A++ E A L EM D T +++D + Q +
Sbjct: 314 -PSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGL 372
Query: 502 YD 503
D
Sbjct: 373 VD 374
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 129/309 (41%), Gaps = 46/309 (14%)
Query: 95 AIQPSHYLVNKLIHRF--KDDWKSALGIFR--WAGSCPGYEHSSEIYEMMVDILGKVRQM 150
+ P+ N L+ D W+ A G+ + CP + ++VD L + +
Sbjct: 317 GLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCP---LDDVTFNILVDFLCQNGLV 373
Query: 151 DQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLL 209
D++ +LE+M + G + + T V+ F G ++AV + G NT + ++
Sbjct: 374 DRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIV 433
Query: 210 LDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG 267
L LC + A + ++ + C PPN TFN I+ CK V++A +++M +G
Sbjct: 434 LKGLCSAERWVDAEELMSQMIQQGC-PPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 492
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT--------------- 312
C P +ISYST+I + N + ELL+ M +G PN + Y++
Sbjct: 493 CSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVI 552
Query: 313 --------------------VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
V+S L K G+ + AI M G P+ + LI L
Sbjct: 553 QMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGL 612
Query: 353 GRASRVQEA 361
V+EA
Sbjct: 613 ASEGFVKEA 621
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 93/235 (39%), Gaps = 39/235 (16%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAK--VMRRFSGAGQWEDAVRTFDEL 194
Y +++ K +D+ LL M+ NT++ V++ A +W DA ++
Sbjct: 395 YTTVINGFCKEGLIDEAVMLLRSMAACGCRP-NTVSYTIVLKGLCSAERWVDAEELMSQM 453
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRV 253
G N T N L++ LCK+G VE A + + L + P+ +++ I G K
Sbjct: 454 IQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNT 513
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTI----------------------------------- 278
DEA + M G P I YS+I
Sbjct: 514 DEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAV 573
Query: 279 IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
I S C++ + E L M + GC PN TYT ++ LA G +EA I ++
Sbjct: 574 ISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEILTEL 628
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 78/177 (44%), Gaps = 7/177 (3%)
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
P++ + L+ L R+ +A+ V +M G AP ++ + A
Sbjct: 109 PNAYTYFPLVRALCARGRIADALAVLD-DMARRGCAPTPPMYHVTLEAACRASGFRGAVG 167
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIH 459
VL +++ C +V + +L++ G DE + +LL D++ D+ +Y V+
Sbjct: 168 VLRDLHG-RGCALDVGNCNLVLQAVCDQGPVDEAV-RLLRDLLPSFGCEPDVVSYNAVLR 225
Query: 460 GLCRANKCEWAYL--LFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
GLC A + W ++ L +EM+ P T ++ + + +++ ++ A M +
Sbjct: 226 GLCMARR--WGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAE 280
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 75/168 (44%), Gaps = 2/168 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
+ +++ L K ++Q LL++M G L + + V+ AG ++A+ + +
Sbjct: 465 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMV 524
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVD 254
G+ NT + + L EG++ +F ++ + + +A +N I CK D
Sbjct: 525 KKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETD 584
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
A + M GC P +Y+ +I+ + + E+L E+ ++G
Sbjct: 585 RAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEILTELCSKG 632
>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Glycine max]
Length = 905
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 191/374 (51%), Gaps = 13/374 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGT 196
Y ++ LG+ ++++ +LE M L + ++ AG+ E A++ D +
Sbjct: 380 YNCILTCLGRKGKVEEALRILEAMKMDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKE 439
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVD 254
GL N T+N+++D LCK +++ A S+FL L K C P++ TF I G + +V+
Sbjct: 440 AGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVC-TPDSVTFCSLIDGLGRHGKVN 498
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSY---CRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
+A ++M G P + Y+++I+++ R+ + K+Y+ EM +GC P+++
Sbjct: 499 DAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYK---EMMHRGCSPDLMLLN 555
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
M + K+G+ E+ + E++K G PD R ++ LI+ L + ++ ++ EM E
Sbjct: 556 NYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLF-YEMKE 614
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
G+ DT +N +I F G KA+ +LEEM K + +P V T+ ++ K + D
Sbjct: 615 QGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEM-KTKGLQPTVVTYGSVIDGLAKIDRLD 673
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRL 491
E + +L + + L++ Y+ +I G + + + AYL+ +E++ +TP T
Sbjct: 674 E--AYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNC 731
Query: 492 ILDEVKQKHMYDAA 505
+LD + + D A
Sbjct: 732 LLDALVKAEEIDEA 745
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 175/350 (50%), Gaps = 7/350 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ L + D M LL +M + G+ VT++ ++ F+ G+ + A+ DE+
Sbjct: 205 YTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMK 264
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVD 254
+ + N+ +D K GKV++A F ELKS + P+ TF I CK RVD
Sbjct: 265 SNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVD 324
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA +E+ + PCV +Y+T+I Y F++ Y LL+ + +GC P+V+ Y ++
Sbjct: 325 EAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCIL 384
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
+ L + G EEA+RI E MK+ + P+ +N LI L +A ++ A+ V Q M E G+
Sbjct: 385 TCLGRKGKVEEALRILEAMKM-DAAPNLTSYNILIDMLCKAGELEAALKV-QDSMKEAGL 442
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
P+ T N MI ++A + ++ + C P+ TF L+ + GK ++
Sbjct: 443 FPNIITVNIMIDRLCKAQRLDEACSIFLGLDH-KVCTPDSVTFCSLIDGLGRHGKVNDAY 501
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
L + M++ + + YT +I + + E + ++KEM+ +P
Sbjct: 502 -MLYEKMLDSGQ-TPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSP 549
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/413 (25%), Positives = 184/413 (44%), Gaps = 41/413 (9%)
Query: 140 MVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
++D LG+ +++ L E+M G ++R F G+ ED + + E+ G
Sbjct: 487 LIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRG 546
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQ 257
+ +N +D + K G++E R++F E+K+ + P+ +++I IHG K +
Sbjct: 547 CSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTY 606
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
EMK G H +Y+ +I +C+ +K Y+LL+EM+ +G P VVTY +V+ L
Sbjct: 607 KLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGL 666
Query: 318 AK-----------------------------------SGDFEEAIRITEKMKIVGSKPDS 342
AK G +EA I E++ G P++
Sbjct: 667 AKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNT 726
Query: 343 RFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLE 402
+NCL+ L +A + EA+ +Q M P+ T++ M+ KAF +
Sbjct: 727 YTWNCLLDALVKAEEIDEALVCFQ-NMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQ 785
Query: 403 EMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC 462
EM K + KPN T+ ++ + G E L + + + D Y +I GL
Sbjct: 786 EMQK-QGLKPNTITYTTMISGLARVGNVLEA-KDLFERFKSSGGIP-DSACYNAMIEGLS 842
Query: 463 RANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
ANK AY+LF+E +TC ++LD + + + A + AV++++
Sbjct: 843 NANKAMDAYILFEETRLKGCRIYSKTCVVLLDALHKADCLEQAAIVGAVLREM 895
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/424 (25%), Positives = 184/424 (43%), Gaps = 43/424 (10%)
Query: 98 PSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALL 157
P LV +I R KD + AL FRW HS E Y ++ ++ + R ++ + +L
Sbjct: 97 PQPELVVGVIRRLKD-VRVALHYFRWVERKTKQLHSPEAYNALLMLMARTRNLEYLEQIL 155
Query: 158 EEMSKGHIVTLNT--------------------IAKVMRRF----------------SGA 181
EEMS N + + MR+F S A
Sbjct: 156 EEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETMRKFKFRPAYSAYTTLIGALSAA 215
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTF 240
+ + + ++ G E L+ +EG+V+ A S+ E+KS + +
Sbjct: 216 HEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLY 275
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
N+ I + K+ +VD A E+K G P ++++++I C+ + EL +E+ +
Sbjct: 276 NVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDS 335
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
P V Y T++ G F EA + E+ K G P +NC++ LGR +V+E
Sbjct: 336 NKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEE 395
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
A+ + +E + AP+ +++N +I M G E A V + M K PN+ T + +
Sbjct: 396 ALRI--LEAMKMDAAPNLTSYNILIDMLCKAGELEAALKVQDSM-KEAGLFPNIITVNIM 452
Query: 421 LKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH 480
+ K + DE S L ++ + D T+ +I GL R K AY+L+++M+
Sbjct: 453 IDRLCKAQRLDEACSIFLG--LDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDS 510
Query: 481 DITP 484
TP
Sbjct: 511 GQTP 514
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 124/240 (51%), Gaps = 2/240 (0%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G + Y +++D K ++++ LLEEM +KG T+ T V+ + + ++A
Sbjct: 616 GLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEA 675
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHG 246
F+E + ++ N + L+D K G+++ A + EL + + PN +T+N +
Sbjct: 676 YMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDA 735
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
K +DEA Q MK C P ++YS ++ C+ F+K + EMQ QG PN
Sbjct: 736 LVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPN 795
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
+TYTT++S LA+ G+ EA + E+ K G PDS +N +I L A++ +A +++
Sbjct: 796 TITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFE 855
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 157/349 (44%), Gaps = 49/349 (14%)
Query: 141 VDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGL 199
+D + K ++++ RAL EE+ ++G + + + ++ G +D + F E+ GL
Sbjct: 558 MDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGL 617
Query: 200 EKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQW 258
+T N+++D CK GKV A + E+K+ + P T+ I G KI+R+DEA
Sbjct: 618 HLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYM 677
Query: 259 TIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG---------------- 302
+E K V+ YS++I + + + Y +L+E+ +G
Sbjct: 678 LFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALV 737
Query: 303 -------------------CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSR 343
CPPN VTY+ +++ L K F +A ++M+ G KP++
Sbjct: 738 KAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTI 797
Query: 344 FFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEE 403
+ +I L R V EA +++ +G PD++ +N MI S+ A+ + EE
Sbjct: 798 TYTTMISGLARVGNVLEAKDLFE-RFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEE 856
Query: 404 MNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQ------LLDDMVNKHH 446
+L+ C+ +T LL + K +CL Q +L +M H
Sbjct: 857 -TRLKGCRIYSKTCVVLLDALHKA----DCLEQAAIVGAVLREMAKSQH 900
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 92/408 (22%), Positives = 167/408 (40%), Gaps = 68/408 (16%)
Query: 161 SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGL--------------------- 199
S+G T++ + +V+ + EDA+ TFDE+ L
Sbjct: 63 SEGMRKTVHDVCRVLDTYPWGAALEDALNTFDEMPQPELVVGVIRRLKDVRVALHYFRWV 122
Query: 200 EKNT------ETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINR 252
E+ T E N LL + + +E + E+ + P+ +T + + K +
Sbjct: 123 ERKTKQLHSPEAYNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRK 182
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQS------------------------------- 281
+ EA I+ M+ P +Y+T+I +
Sbjct: 183 LREAFGVIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTT 242
Query: 282 ----YCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+ R+ LLDEM++ ++V Y + K G + A + ++K G
Sbjct: 243 LICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQG 302
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKA 397
PD F +I L +A RV EAV +++ E+ N P +NTMI + G +A
Sbjct: 303 LVPDDVTFTSMIGVLCKAERVDEAVELFE-ELDSNKSVPCVYAYNTMIMGYGSVGKFNEA 361
Query: 398 FHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLV 457
+ +LE K + C P+V ++ +L + GK +E L ++L+ M K + ++T+Y ++
Sbjct: 362 YSLLER-QKRKGCIPSVIAYNCILTCLGRKGKVEEAL-RILEAM--KMDAAPNLTSYNIL 417
Query: 458 IHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
I LC+A + E A + M + P T +++D + + D A
Sbjct: 418 IDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEA 465
>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 711
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/458 (25%), Positives = 205/458 (44%), Gaps = 48/458 (10%)
Query: 88 KQDHVCNAIQPSHYLVNKLIHRFKDDWK--SALGIFRWAGSCPGYEHSSEIYEMMVDILG 145
K++ VC+ P N +IH F + K A ++ G+ + +++ L
Sbjct: 107 KEEGVCS---PDVVTYNTVIHGFFKEGKIGKACNLYHEMMQ-QGFVPDVVTHNSIINALC 162
Query: 146 KVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTE 204
K R +D LL +M G T ++ +S G+WE+A + F E+ GL +
Sbjct: 163 KARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIV 222
Query: 205 TMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWC--------------- 248
+ N +D+LCK G+ + A +F + + PN T+ I +HG+
Sbjct: 223 SWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTM 282
Query: 249 --------------------KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
K +DEA + EM+G G P V +YST+I + CR
Sbjct: 283 KGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRL 342
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG-SKPDSRFFNC 347
+ + ++M G PN V Y +++ GD +A + +M G +P+ FFN
Sbjct: 343 ADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNS 402
Query: 348 LIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKL 407
+++++ + RV +A +++ + + + G D FNT+I + G KAF VL+ M
Sbjct: 403 IVHSICKEGRVMDAHHIFDL-VKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMIS- 460
Query: 408 EHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKC 467
P+ T++ L+ FK+G+ D+ L+ L +M +K + TY +++ GL RA +
Sbjct: 461 AGIGPDTFTYNTLVNGYFKSGRIDDGLN-LFREMSDKK-IKPTTVTYNIILDGLFRAGRT 518
Query: 468 EWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
A + EMIG T T +IL + + + D A
Sbjct: 519 VAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEA 556
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 163/369 (44%), Gaps = 42/369 (11%)
Query: 152 QMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLD 211
+M A E + +VT NT V+ F G+ A + E+ G + T N +++
Sbjct: 103 RMMAKEEGVCSPDVVTYNT---VIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIIN 159
Query: 212 TLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHP 270
LCK V+ A + ++ + +PPN T+ IHG+ + R +EA +EM G G P
Sbjct: 160 ALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIP 219
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY-------------------- 310
++S+++ + S C+ + E+ M A+G PN+VTY
Sbjct: 220 DIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFF 279
Query: 311 ---------------TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
T ++ AK G +EA+ I +M+ G PD ++ LI L R
Sbjct: 280 NTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRM 339
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQ 415
R+ +AV + +M GV P+T ++++I F HG KA ++ EM +PN+
Sbjct: 340 GRLADAVDKFN-QMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIA 398
Query: 416 TFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFK 475
F+ ++ S K G+ + + + D+V DI + +I G C + A+ +
Sbjct: 399 FFNSIVHSICKEGRVMD--AHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLD 456
Query: 476 EMIGHDITP 484
MI I P
Sbjct: 457 AMISAGIGP 465
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 168/365 (46%), Gaps = 10/365 (2%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
++ +++D K MD+ +L EM +G + T + ++ G+ DAV F+++
Sbjct: 293 VFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQM 352
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIP-PNAHTFNIFIHGWCKINR 252
G++ NT + L+ C G + A+ + E+ + IP PN FN +H CK R
Sbjct: 353 IGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGR 412
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
V +A +K G +I ++T+I YC K + +LD M + G P+ TY T
Sbjct: 413 VMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNT 472
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN 372
+++ KSG ++ + + +M KP + +N ++ L RA R A + EM
Sbjct: 473 LVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLH-EMIGC 531
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
G T+N ++ + ++A + +++ + + K N+ T + ++ S + + +E
Sbjct: 532 GTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTM-NVKFNITTLNTMINSMYTVQRREE 590
Query: 433 CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLI 492
++ L ++ L + +TY ++I L + E A +F M P RL+
Sbjct: 591 --AKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAP---CSRLL 645
Query: 493 LDEVK 497
D ++
Sbjct: 646 NDTIR 650
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 141/313 (45%), Gaps = 8/313 (2%)
Query: 205 TMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEA-QWTIQE 262
T ++++ C+ + EL + F L ++ + + N + C R D+A + ++
Sbjct: 10 TYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKVLLRR 69
Query: 263 MKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG--CPPNVVTYTTVMSYLAKS 320
M GC P SY+ +++ C + +LL M + C P+VVTY TV+ K
Sbjct: 70 MTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGFFKE 129
Query: 321 GDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTST 380
G +A + +M G PD N +I L +A V A + + +M +NGV P+ T
Sbjct: 130 GKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLR-QMVDNGVPPNKVT 188
Query: 381 FNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDD 440
+ +MI +S G E+A + EM P++ +++ + S K G++ E +++
Sbjct: 189 YTSMIHGYSTLGRWEEATKMFREMTG-RGLIPDIVSWNSFMDSLCKHGRSKEA-AEIFYS 246
Query: 441 MVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKH 500
M K H +I TY +++HG F M G I +++D ++
Sbjct: 247 MAAKGHRP-NIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRG 305
Query: 501 MYDAAEKIEAVMK 513
M D A I + M+
Sbjct: 306 MMDEAMLILSEMQ 318
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 108/239 (45%), Gaps = 9/239 (3%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQWEDAVRTF 191
++ ++D V +M + ++L+ M I T NT+ + + +G+ +D + F
Sbjct: 434 MFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTL---VNGYFKSGRIDDGLNLF 490
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKI 250
E+ ++ T T N++LD L + G+ A+ + E+ C + T+NI + G C+
Sbjct: 491 REMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRN 550
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
N DEA Q++ + + +T+I S + +L + G PN TY
Sbjct: 551 NCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTY 610
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYT-LGRASRVQEAVYVYQVE 368
++ L K G EEA + M+ G P SR N I T L + V+ Y+ +V+
Sbjct: 611 GIMIRNLLKEGSVEEADNMFSSMEKSGCAPCSRLLNDTIRTLLEKGEIVKAGNYMSKVD 669
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 86/186 (46%), Gaps = 3/186 (1%)
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
PP + TY VM+ ++ E + ++ G K D N ++ L R +AV
Sbjct: 5 PPTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVK 64
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH-CKPNVQTFHPLLK 422
V M E G PD ++ ++ ++A +L M K E C P+V T++ ++
Sbjct: 65 VLLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIH 124
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
FK GK + L +M+ + + D+ T+ +I+ LC+A + A LL ++M+ + +
Sbjct: 125 GFFKEGKIGKA-CNLYHEMMQQGFVP-DVVTHNSIINALCKARAVDNAELLLRQMVDNGV 182
Query: 483 TPRYQT 488
P T
Sbjct: 183 PPNKVT 188
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 110/243 (45%), Gaps = 12/243 (4%)
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI 329
P + +Y ++ CR + G + TV+ L + ++A+++
Sbjct: 6 PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65
Query: 330 T-EKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV-APDTSTFNTMITM 387
+M +G PD+ + ++ L +R Q+A+ + ++ E GV +PD T+NT+I
Sbjct: 66 LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHG 125
Query: 388 FSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC---LSQLLDDMVNK 444
F G KA ++ EM + + P+V T + ++ + K D L Q++D+ V
Sbjct: 126 FFKEGKIGKACNLYHEMMQ-QGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPP 184
Query: 445 HHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYD 503
+ + TYT +IHG + E A +F+EM G + P + +D + K +
Sbjct: 185 NKV-----TYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKE 239
Query: 504 AAE 506
AAE
Sbjct: 240 AAE 242
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 130/301 (43%), Gaps = 11/301 (3%)
Query: 38 SSPIESYCSDGARLDHHQV--LCVDSPRLPDI---DVIISKVHVGSSEDEVFQSLKQDHV 92
+S + S C +G +D H + L D DI + +I + + F L +
Sbjct: 401 NSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDA-MI 459
Query: 93 CNAIQPSHYLVNKLIHRFKDDWK--SALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQM 150
I P + N L++ + + L +FR S + ++ Y +++D L + +
Sbjct: 460 SAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREM-SDKKIKPTTVTYNIILDGLFRAGRT 518
Query: 151 DQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLL 209
+ +L EM G V+L T +++ ++A+ F +L T ++ N T+N +
Sbjct: 519 VAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTM 578
Query: 210 LDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGC 268
++++ + E A+ +F + S + PNA T+ I I K V+EA M+ GC
Sbjct: 579 INSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGC 638
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
PC + I++ + K + ++ + T + ++S + G++ E I+
Sbjct: 639 APCSRLLNDTIRTLLEKGEIVKAGNYMSKVDGKSISLEASTSSLLLSLFSGKGNYREQIQ 698
Query: 329 I 329
+
Sbjct: 699 L 699
>gi|242086476|ref|XP_002443663.1| hypothetical protein SORBIDRAFT_08g023090 [Sorghum bicolor]
gi|241944356|gb|EES17501.1| hypothetical protein SORBIDRAFT_08g023090 [Sorghum bicolor]
Length = 853
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 172/333 (51%), Gaps = 11/333 (3%)
Query: 94 NAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQM 153
+A Q + L KL+H D ALG F+W PG++H Y M+ ILG+ RQ +
Sbjct: 326 DAFQANQVL--KLLH----DHTVALGFFQWLKRQPGFKHDGHTYTTMIGILGQARQFGVL 379
Query: 154 RALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDT 212
+ LL+EMS+ H T+ T +++ + A ++AV+ F+E+ G E + T L+D
Sbjct: 380 KKLLDEMSRAHCKPTVVTYNRIIHAYGRANYLKEAVKVFEEMQEAGYEPDRVTYCTLIDI 439
Query: 213 LCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPC 271
K G +++A ++ ++ + P+ T++ ++ K ++ A EM +GC P
Sbjct: 440 HAKAGYLDIAMDLYGRMQEVGLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEMIENGCTPN 499
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
+++Y+ +I + N+ V +L +MQ G P+ +TY+ VM L G +EA +
Sbjct: 500 LVTYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFI 559
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHH 391
+M+ + PD + L+ G+A V +A+ YQ M ++G+ P+ T N++++ F
Sbjct: 560 EMRRDWA-PDEPVYGLLVDLWGKAGNVDKALGWYQA-MLQDGLQPNVPTCNSLLSAFLKM 617
Query: 392 GHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
+ A+ VL+ M + P+VQT+ LL C
Sbjct: 618 NRFQDAYIVLQNM-LAQGLVPSVQTYTLLLSCC 649
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 101/206 (49%), Gaps = 4/206 (1%)
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
TYTT++ L ++ F ++ ++M KP +N +I+ GRA+ ++EAV V++ E
Sbjct: 362 TYTTMIGILGQARQFGVLKKLLDEMSRAHCKPTVVTYNRIIHAYGRANYLKEAVKVFE-E 420
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M E G PD T+ T+I + + G+ + A + M ++ P+ T+ ++ +C G
Sbjct: 421 MQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRMQEVG-LSPDTFTYSAMV-NCLGKG 478
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+L +M+ ++ + ++ TY ++I +A E L+K+M P T
Sbjct: 479 GQLAAAYKLFCEMI-ENGCTPNLVTYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKIT 537
Query: 489 CRLILDEVKQKHMYDAAEKIEAVMKK 514
++++ + D AE + M++
Sbjct: 538 YSIVMEVLGHCGHLDEAEAVFIEMRR 563
>gi|302816541|ref|XP_002989949.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
gi|300142260|gb|EFJ08962.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
Length = 447
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 115/431 (26%), Positives = 210/431 (48%), Gaps = 22/431 (5%)
Query: 87 LKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDIL 144
L ++ + P+ + N LI F A+ +F S ++S + +++ L
Sbjct: 12 LFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLG-L 70
Query: 145 GKVRQMDQMRALLEEMSKGHIVTLNTIAKVM-RRFSGAGQWEDAVRTFDELGTFGLEKNT 203
++ QM L EM G + + ++ R F AG+ A+ F E+ G+E +
Sbjct: 71 CEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGR---AIEFFKEMKASGVEPDL 127
Query: 204 ETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
E+ ++LL L G++ A ++F + +C P+ T+N+ + G+CKI + EAQ ++E+
Sbjct: 128 ESYHILLSALSDSGRMAEAHALFSAM-TC-SPDIMTYNVLMDGYCKIGQTYEAQSLMKEI 185
Query: 264 KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF 323
G P V +YS II YC+ + +E+ +M C PN VT+ T+++ K+G
Sbjct: 186 LKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGML 245
Query: 324 EEAIRITEKMKIVGSKPDSRFFNCLIYTL-GRASRVQEAVYVYQVEMPENGVAPDTSTFN 382
E+AI++ +M+ +G K +N LI +L + V AV ++ ++ G+ P T+N
Sbjct: 246 EDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFN-KLEGAGLTPTIVTYN 304
Query: 383 TMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMV 442
++I FS + +L M+ E CKP+V T++ L+ + ++ +
Sbjct: 305 SLIQGFSERAN--DGLRLLCHMHA-EGCKPDVITYNCLISGLCSANRVEDA-----QRLF 356
Query: 443 NKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMY 502
N + ++TT+ +I GLC K E A + M D+T + T +IL K M+
Sbjct: 357 NGMACAPNVTTFNFLIRGLCAQKKVEEARNILDRMTAPDMTT-FNT--IILAFCKAGAMH 413
Query: 503 DAAEKIEAVMK 513
DA E ++ ++K
Sbjct: 414 DAREVMKDMLK 424
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 161/365 (44%), Gaps = 42/365 (11%)
Query: 147 VRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTET 205
R+ DQ L +E+ G +T ++R F GQ AV F ++ + GL N T
Sbjct: 3 ARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNAST 62
Query: 206 MNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
MN LL LC+ G++ A +F E+++ P + + NI + G+ R E +EMK
Sbjct: 63 MNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRAIE---FFKEMK 119
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
G P + SY ++ + ++ + L M C P+++TY +M K G
Sbjct: 120 ASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTY 176
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTM 384
EA + +++ G +P+ ++ +I + +V+EA V+ ++M E+ P+ TFNT+
Sbjct: 177 EAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVF-MKMIESNCVPNAVTFNTL 235
Query: 385 ITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS-CFKTGK-------------- 429
I F G E A + EM K+ CK + T++ L+ S C K G
Sbjct: 236 IAGFCKAGMLEDAIKLFAEMEKI-GCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGA 294
Query: 430 -------TDECLSQLLDDMVNKHHLSL----------DITTYTLVIHGLCRANKCEWAYL 472
T L Q + N L D+ TY +I GLC AN+ E A
Sbjct: 295 GLTPTIVTYNSLIQGFSERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQR 354
Query: 473 LFKEM 477
LF M
Sbjct: 355 LFNGM 359
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 12/126 (9%)
Query: 148 RQMDQMRALL---EEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTE 204
R D +R L E K ++T N + + A + EDA R F+ + N
Sbjct: 313 RANDGLRLLCHMHAEGCKPDVITYNCL---ISGLCSANRVEDAQRLFNGMAC---APNVT 366
Query: 205 TMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
T N L+ LC + KVE AR++ L P+ TFN I +CK + +A+ +++M
Sbjct: 367 TFNFLIRGLCAQKKVEEARNI---LDRMTAPDMTTFNTIILAFCKAGAMHDAREVMKDML 423
Query: 265 GHGCHP 270
HG +P
Sbjct: 424 KHGFYP 429
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/423 (25%), Positives = 199/423 (47%), Gaps = 7/423 (1%)
Query: 86 SLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCP-GYEHSSEIYEMMVDIL 144
SL + + P Y ++ LI+ F + LG A G + + + +++ L
Sbjct: 143 SLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGL 202
Query: 145 GKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNT 203
KV + Q L ++M ++G+ ++T ++ G+ A F ++G G + +
Sbjct: 203 CKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDV 262
Query: 204 ETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQE 262
T + ++D+LCK+ +V A +F +K+ I PN T+N I G C +R EA + E
Sbjct: 263 VTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNE 322
Query: 263 MKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGD 322
M P ++++S +I +C++ N + +L M G PNVVTY+++M+ + +
Sbjct: 323 MMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAE 382
Query: 323 FEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFN 382
EA ++ + M G KPD +N LI +A R+ EA ++ EM G+ PD ++N
Sbjct: 383 VVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFN-EMIHQGLTPDIVSYN 441
Query: 383 TMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMV 442
T+I G +A + + M + P++ T+ LL K G + L +
Sbjct: 442 TLIDGLCQLGRLREAHDLFKNMLTNGNL-PDLCTYSILLDGFCKQGYLAKAFR--LFRAM 498
Query: 443 NKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMY 502
+L ++ Y ++I +C++ + A LF E+ + P Q I++ + ++ +
Sbjct: 499 QSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLL 558
Query: 503 DAA 505
D A
Sbjct: 559 DEA 561
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 142/270 (52%), Gaps = 3/270 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
+ ++++I K + + R +L+ M++ G + T + +M +S + +A + FD +
Sbjct: 335 FSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMI 394
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
T G + + + N+L++ CK ++ A+ +F E+ + P+ ++N I G C++ R+
Sbjct: 395 TKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLR 454
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA + M +G P + +YS ++ +C+Q +K + L MQ+ PN+V Y ++
Sbjct: 455 EAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILI 514
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
+ KS + +EA ++ ++ + G +P+ + + +I L + + EA+ ++ M E+G
Sbjct: 515 DAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFR-NMEEDGC 573
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
P+ ++N +I F H +A ++ EM
Sbjct: 574 PPNEFSYNVIIRGFLQHKDESRAVQLIGEM 603
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 100/210 (47%), Gaps = 8/210 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKG---HIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++++ K +++ + + L EM +G IV+ NT+ + + G+ +A F
Sbjct: 405 YNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQL---GRLREAHDLFK 461
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKIN 251
+ T G + T ++LLD CK+G + A +F ++S + PN +NI I CK
Sbjct: 462 NMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSR 521
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
+ EA+ E+ G P V Y+TII C++ + E M+ GCPPN +Y
Sbjct: 522 NLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYN 581
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPD 341
++ + D A+++ +M+ G D
Sbjct: 582 VIIRGFLQHKDESRAVQLIGEMREKGFVAD 611
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 89/175 (50%), Gaps = 2/175 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++D L ++ ++ + L + M + G++ L T + ++ F G A R F +
Sbjct: 440 YNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQ 499
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
+ L+ N N+L+D +CK ++ AR +F EL + PN + I+G CK +D
Sbjct: 500 STYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLD 559
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
EA + M+ GC P SY+ II+ + + + S+ +L+ EM+ +G +V T
Sbjct: 560 EALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADVAT 614
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 82/169 (48%), Gaps = 3/169 (1%)
Query: 345 FNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
FN L+ + + +AV +M G++PDT T + +I F + F VL ++
Sbjct: 124 FNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGFSVLAKI 183
Query: 405 NKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRA 464
KL + + TF+ L+ K GK + + +L DDMV + + D+ TYT +I+GLC+
Sbjct: 184 IKL-GLQLTIVTFNTLINGLCKVGKFGQAV-ELFDDMVARGYQP-DVHTYTTIINGLCKI 240
Query: 465 NKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
+ A LF++M P T I+D + + + A I + MK
Sbjct: 241 GETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMK 289
>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
Length = 847
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 190/381 (49%), Gaps = 6/381 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEE-MSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++D K + + LL++ + KG + T ++ G E A+ F+E
Sbjct: 222 YNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQ 281
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
L+ + N L+ LC++G + A V E+ + P+ T+NI I+G CK+ +
Sbjct: 282 AKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNIS 341
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
+A + + G P V +++T+I YC++ +L++ M G P+ +TY +V+
Sbjct: 342 DAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVL 401
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
+ L K+G +E E+M + G +P++ +N LI + ++++EA V V M ++G+
Sbjct: 402 NGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVI-VRMSQDGL 460
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
PDT +FNT+I F +G + A+ + +++++ + TF+ L+ + + + +
Sbjct: 461 VPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGY-SATADTFNILIGA-YSSKLNMQMA 518
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
++ +M++K + D+ TY +++ G C+A + AY+ EM+ P T +L+
Sbjct: 519 EKIFGEMISKGY-KPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLN 577
Query: 495 EVKQKHMYDAAEKIEAVMKKL 515
+ H A I +M ++
Sbjct: 578 SLAMNHRVSEAVAIIHIMVRM 598
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 175/362 (48%), Gaps = 5/362 (1%)
Query: 154 RALLEEMSKGHIVT-LNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDT 212
R L +EM + + + T V+ G ++ ++ G+ N T N+ +
Sbjct: 100 RHLFDEMLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRG 159
Query: 213 LCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCV 272
LC+ G++E A ++ + + I P+ T+N + G CK ++V EA ++ M GC P
Sbjct: 160 LCEGGRLEEAVALVESMDAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDD 219
Query: 273 ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEK 332
+Y+TII YC++ + ELL + +G P+ VTY ++++ L GD E A+ + +
Sbjct: 220 FTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNE 279
Query: 333 MKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
+ KPD +N L+ L R + A+ V EM E+G PD T+N +I G
Sbjct: 280 AQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMN-EMVEDGCHPDIWTYNIVINGLCKMG 338
Query: 393 HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
+ A V+ + ++ P+V TF+ ++ K K D L QL++ M + ++ D
Sbjct: 339 NISDAAVVMNDA-IVKGYLPDVFTFNTMIDGYCKRLKLDSAL-QLVERMW-MYGIAPDAI 395
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
TY V++GLC+A K + F+EMI P T ++++ + + + A + M
Sbjct: 396 TYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRM 455
Query: 513 KK 514
+
Sbjct: 456 SQ 457
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 170/364 (46%), Gaps = 11/364 (3%)
Query: 149 QMDQMRALLEEMSK---GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTET 205
++++ AL+E M +VT NT+ MR + ++A + + G + T
Sbjct: 165 RLEEAVALVESMDAYIAPDVVTYNTL---MRGLCKDSKVQEAAQYLRRMMNQGCIPDDFT 221
Query: 206 MNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
N ++D CK ++ A + + + P+ T+ I+G C V+ A E +
Sbjct: 222 YNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQ 281
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
P ++ Y+++++ CRQ ++++EM GC P++ TY V++ L K G+
Sbjct: 282 AKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNIS 341
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTM 384
+A + + G PD FN +I + ++ A+ + + M G+APD T+N++
Sbjct: 342 DAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVE-RMWMYGIAPDAITYNSV 400
Query: 385 ITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK 444
+ G ++ EEM L+ C+PN T++ L+++ K + +E ++ +++
Sbjct: 401 LNGLCKAGKAKEVNETFEEM-ILKGCRPNAITYNILIENFCKINQLEEASGVIVR--MSQ 457
Query: 445 HHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDA 504
L D ++ +IHG CR + AYLLF+++ + T +++ K
Sbjct: 458 DGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQM 517
Query: 505 AEKI 508
AEKI
Sbjct: 518 AEKI 521
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 162/354 (45%), Gaps = 11/354 (3%)
Query: 162 KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVEL 221
K +V N++ K + R G A++ +E+ G + T N++++ LCK G +
Sbjct: 286 KPDLVVYNSLVKGLCR---QGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISD 342
Query: 222 ARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQ 280
A V + + P+ TFN I G+CK ++D A ++ M +G P I+Y++++
Sbjct: 343 AAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLN 402
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
C+ +V E +EM +GC PN +TY ++ K EEA + +M G P
Sbjct: 403 GLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVP 462
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
D+ FN LI+ R + A ++Q ++ E G + TFN +I +S + + A +
Sbjct: 463 DTISFNTLIHGFCRNGDLDGAYLLFQ-KLDEKGYSATADTFNILIGAYSSKLNMQMAEKI 521
Query: 401 LEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHG 460
EM + KP++ T+ L+ K D L +MV+K + + T+ V++
Sbjct: 522 FGEMISKGY-KPDLYTYRVLVDGSCKAANVDRAYVHLA-EMVSKGFVP-SMATFGRVLNS 578
Query: 461 LCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
L ++ A + M+ + P L D +K + +E +MKK
Sbjct: 579 LAMNHRVSEAVAIIHIMVRMGVVPEVVDTILSTD---KKEIAAPKILVEELMKK 629
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 125/289 (43%), Gaps = 6/289 (2%)
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDE 255
FG N ++D L + A V++ + S + P+A T + I +C R
Sbjct: 4 FGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHV 63
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
A ++ + GC ++Y T+++ + L DEM + P+V T+ V+
Sbjct: 64 ALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLH 123
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
L + GD E+ + K+ G + N I L R++EAV + VE + +A
Sbjct: 124 ALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVAL--VESMDAYIA 181
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS 435
PD T+NT++ ++A L M + C P+ T++ ++ K E +
Sbjct: 182 PDVVTYNTLMRGLCKDSKVQEAAQYLRRMMN-QGCIPDDFTYNTIIDGYCKRDMLQEA-T 239
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
+LL D + K + D TY +I+GLC E A LF E D+ P
Sbjct: 240 ELLKDAIFKGFVP-DRVTYCSLINGLCAEGDVERALELFNEAQAKDLKP 287
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 6/218 (2%)
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
M GCPP Y +M L + ++A ++ +M G PD+R I + R
Sbjct: 1 MDLFGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGR 60
Query: 358 VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTF 417
A+ + + +PE G + T++ HGH A H+ +EM + + P+V TF
Sbjct: 61 PHVALRLLR-SLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRD-VFPDVATF 118
Query: 418 HPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
+ +L + + G E S L V K +S++ T + I GLC + E A L + M
Sbjct: 119 NNVLHALCQKGDIME--SGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESM 176
Query: 478 IGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEAVMKK 514
+ I P T ++ + K + +AA+ + +M +
Sbjct: 177 DAY-IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQ 213
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 185/381 (48%), Gaps = 7/381 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ K Q++ +L+ M S+G + + T ++ F G+ + A+ F+EL
Sbjct: 141 YNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELL 200
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVD 254
E T +L++ +G +++A + E+ S + P+ T+N I G CK VD
Sbjct: 201 KDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVD 260
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
+A ++ + GC P +I+Y+ ++++ + +S+ +L+ EM + GC PNVVT++ ++
Sbjct: 261 KAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILI 320
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
L + G EEA+ + MK G KPD+ ++ LI R R+ A + M +G
Sbjct: 321 GTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEY-MISDGC 379
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
PD +NT++ G ++A V E+++++ C PNV +++ L + + +G L
Sbjct: 380 LPDIVNYNTIMAGLCRTGKADQALEVFEKLDEV-GCPPNVSSYNTLFSALWSSGDRYRAL 438
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
+L + + D TY +I LCR + A L +M P + +IL
Sbjct: 439 EMILKLL--NQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILL 496
Query: 495 EV-KQKHMYDAAEKIEAVMKK 514
+ K DA E + A+ +K
Sbjct: 497 GLCKVNRANDAIEVLAAMTEK 517
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 150/298 (50%), Gaps = 11/298 (3%)
Query: 138 EMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTF 197
EMMVD + + +R+L K I+T N + +R G+W + + E+ +
Sbjct: 256 EMMVD-----KAFELLRSLSSRGCKPDIITYNIL---LRTLLSRGKWSEGEKLISEMISI 307
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEA 256
G + N T ++L+ TLC++GKVE A ++ +K + P+A+ ++ I G+C+ R+D A
Sbjct: 308 GCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLA 367
Query: 257 QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSY 316
++ M GC P +++Y+TI+ CR + E+ +++ GCPPNV +Y T+ S
Sbjct: 368 TEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSA 427
Query: 317 LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
L SGD A+ + K+ G PD +N LI L R V EA+ + V+M P
Sbjct: 428 LWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELL-VDMQSGRYRP 486
Query: 377 DTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
+ ++N ++ A VL M + + C+PN T+ L++ +G E +
Sbjct: 487 NVVSYNIILLGLCKVNRANDAIEVLAAMTE-KGCQPNETTYILLIEGIGFSGLRAEAM 543
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 156/343 (45%), Gaps = 9/343 (2%)
Query: 146 KVRQMDQMRALLEEMSKGHIVTLNT----IAKVMRRFSGAGQWEDAVRTFDELGTFGLEK 201
KVR ++R + E + H+++ + + K++ R AG++ +++ + + G
Sbjct: 44 KVRNPQKVR-VSAETRQTHVLSFDFKEVHLMKLLNRSCRAGKYNESLYFLECMVDKGYTP 102
Query: 202 NTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQ 261
+ L+ + A V L+ P+ +N I G+ K N+++ A +
Sbjct: 103 DVILCTKLIKGFFNSRNIGKATRVMEILERYGKPDVFAYNALISGFIKANQLENANRVLD 162
Query: 262 EMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSG 321
MK G P V++Y+ +I S+C + E+ +E+ C P V+TYT ++ G
Sbjct: 163 RMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDG 222
Query: 322 DFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTF 381
+ A+++ ++M G +PD+ +N +I + + V +A + + + G PD T+
Sbjct: 223 GIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLR-SLSSRGCKPDIITY 281
Query: 382 NTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDM 441
N ++ G + ++ EM + CKPNV T L+ + + GK +E ++ LL M
Sbjct: 282 NILLRTLLSRGKWSEGEKLISEMISI-GCKPNVVTHSILIGTLCRDGKVEEAVN-LLRSM 339
Query: 442 VNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
K L D Y +I G CR + + A + MI P
Sbjct: 340 KEK-GLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLP 381
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 93/210 (44%), Gaps = 8/210 (3%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKG---HIVTLNTIAKVMRRFSGAGQW 184
G + + Y+ ++ + ++D LE M S G IV NTI + R G+
Sbjct: 343 GLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCR---TGKA 399
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIF 243
+ A+ F++L G N + N L L G A + L+L I P+ T+N
Sbjct: 400 DQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSL 459
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
I C+ VDEA + +M+ P V+SY+ I+ C+ + E+L M +GC
Sbjct: 460 ISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGC 519
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
PN TY ++ + SG EA+ + +
Sbjct: 520 QPNETTYILLIEGIGFSGLRAEAMELANSL 549
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 173/350 (49%), Gaps = 40/350 (11%)
Query: 135 EIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDE 193
E+Y ++D L K + + + L EM+ KG + T + ++ F G+ ++A+ +E
Sbjct: 448 EMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNE 507
Query: 194 LGTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCI------------------- 233
+ + + T +L+D L KEGKV+ A+SV + LK+C+
Sbjct: 508 MVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYE 567
Query: 234 ----------------PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
P+ HT+ I I+G+CK VDEA +EM P ++YS+
Sbjct: 568 VKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSS 627
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
++ C+ S V++L+DEM+ +G P +V+TY +++ L K+G ++AI + KMK G
Sbjct: 628 LVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQG 687
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKA 397
+P++ F L+ L + R+++A V+Q ++ G D +N MI G E+A
Sbjct: 688 IRPNTFTFTILLDGLCKGGRLKDAQEVFQ-DLLTKGYHLDVYIYNVMIYGHCKQGLLEEA 746
Query: 398 FHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHL 447
+L +M + C PN TF ++ + FK + D+ +LL M+ + L
Sbjct: 747 LTMLSKMEE-NGCIPNAVTFDIIINALFKKDENDKA-EKLLRQMIARGLL 794
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 104/416 (25%), Positives = 188/416 (45%), Gaps = 40/416 (9%)
Query: 135 EIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDE 193
E+Y ++D L K + + + L EM+ KG + T + ++ F G+ ++A+ +
Sbjct: 134 EMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNV 193
Query: 194 LGTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINR 252
+ + N T N+L+D LCKEGKV+ A+SV + LK+C+ N T++ + G+ +
Sbjct: 194 MVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYE 253
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
V +AQ M G P V SY+ +I +C+ K L EM PP ++ +
Sbjct: 254 VKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPP-IIQFNK 312
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN 372
++ AK + A+ ++ ++++ G +PD N LI ++ V ++ +
Sbjct: 313 ILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVL-AKILKR 371
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLE-------EMNKLEHC--------------- 410
G P T T NT+I G +KA H + ++N++ +
Sbjct: 372 GYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGA 431
Query: 411 ------------KPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
KPNV+ + ++ + K E L +M K +S D+ TY+ +I
Sbjct: 432 IKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYG-LFSEMTVK-GISADVVTYSTLI 489
Query: 459 HGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
+G C K + A L EM+ I P +T +++D + ++ A+ + AVM K
Sbjct: 490 YGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLK 545
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 114/448 (25%), Positives = 189/448 (42%), Gaps = 72/448 (16%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGT 196
Y +M++ K++++D+ L +EM + K++ F+ + AV L
Sbjct: 276 YNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLEL 335
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWC------- 248
G++ + T+N+L++ C G++ SV + LK PP+ T N I G C
Sbjct: 336 KGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKK 395
Query: 249 -------------KINRVDEAQWT---------------IQEMKGHGCHPCVISYSTIIQ 280
++N+V A ++++ G P V YSTII
Sbjct: 396 ALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIID 455
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
+ C+ S+ Y L EM +G +VVTY+T++ G +EAI + +M + P
Sbjct: 456 ALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINP 515
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
D R + L+ LG+ +V+EA V V M + V PD T+NT++ + +KA HV
Sbjct: 516 DVRTYTILVDALGKEGKVKEAKSVLAV-MLKACVKPDVFTYNTLMNGYLLVYEVKKAQHV 574
Query: 401 LEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL------------------SQLLDDMV 442
M+ L P+V T+ L+ K+ DE L S L+D +
Sbjct: 575 FNAMS-LMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLC 633
Query: 443 NKHHLSL---------------DITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
+S D+ TY +I GLC+ + A LF +M I P
Sbjct: 634 KSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTF 693
Query: 488 TCRLILDEV-KQKHMYDAAEKIEAVMKK 514
T ++LD + K + DA E + ++ K
Sbjct: 694 TFTILLDGLCKGGRLKDAQEVFQDLLTK 721
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/420 (24%), Positives = 191/420 (45%), Gaps = 19/420 (4%)
Query: 98 PSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQ----MD 151
PS +N LI K K AL F G++ + Y +++ + K+ +
Sbjct: 375 PSTVTLNTLIKGLCLKGQVKKALH-FHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIK 433
Query: 152 QMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLD 211
+R + ++K ++ +TI + ++ +A F E+ G+ + T + L+
Sbjct: 434 LLRKIDGRLTKPNVEMYSTIIDALCKYQ---LVSEAYGLFSEMTVKGISADVVTYSTLIY 490
Query: 212 TLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHP 270
C GK++ A + E+ I P+ T+ I + K +V EA+ + M P
Sbjct: 491 GFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKP 550
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRIT 330
V +Y+T++ Y Y K + + M G P+V TYT +++ KS +EA+ +
Sbjct: 551 DVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLF 610
Query: 331 EKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV--EMPENGVAPDTSTFNTMITMF 388
++M PD+ ++ L+ L ++ R+ YV+ + EM + G D T+N++I
Sbjct: 611 KEMHQKNMVPDTVTYSSLVDGLCKSGRIS---YVWDLIDEMRDRGQPADVITYNSLIDGL 667
Query: 389 SHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
+GH +KA + +M K + +PN TF LL K G+ + D + +HL
Sbjct: 668 CKNGHLDKAIALFNKM-KDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHL- 725
Query: 449 LDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
D+ Y ++I+G C+ E A + +M + P T +I++ + +K D AEK+
Sbjct: 726 -DVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKL 784
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 128/279 (45%), Gaps = 6/279 (2%)
Query: 229 LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
LK PP+ T N I G C +V EA ++ G +SY+T+I CR +
Sbjct: 55 LKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDT 114
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
+ L ++ + PNV Y T++ L K EA + +M + G + ++ L
Sbjct: 115 RAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTL 174
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
IY +++EA+ + V M + P+ T+N ++ G ++A VL M L+
Sbjct: 175 IYGFCIVGKLKEALGLLNV-MVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVM--LK 231
Query: 409 HC-KPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKC 467
C K NV T+ L+ F + + +Q + + ++ ++ D+ +Y ++I+G C+ +
Sbjct: 232 ACVKSNVITYSTLMDGYFLVYEVKK--AQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRV 289
Query: 468 EWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAE 506
+ A LFKEMI P Q +++ K KH A
Sbjct: 290 DKALNLFKEMILSRFPPIIQFNKILDSFAKMKHYSTAVS 328
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 142/329 (43%), Gaps = 9/329 (2%)
Query: 166 VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSV 225
VTLNT+ ++ GQ ++A+ D+L G + N + L++ +C+ G A
Sbjct: 64 VTLNTL---IKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKF 120
Query: 226 FLELKSCIP-PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCR 284
++ + PN +N I CK V EA EM G V++YST+I +C
Sbjct: 121 LRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCI 180
Query: 285 QYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRF 344
+ LL+ M + PNV TY ++ L K G +EA + M K +
Sbjct: 181 VGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVIT 240
Query: 345 FNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
++ L+ V++A +V+ M GV PD ++N MI F +KA ++ +EM
Sbjct: 241 YSTLMDGYFLVYEVKKAQHVFN-AMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEM 299
Query: 405 NKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRA 464
L P +Q F+ +L S K +S L + + D+ T ++I+ C
Sbjct: 300 -ILSRFPPIIQ-FNKILDSFAKMKHYSTAVS--LSHRLELKGIQPDLFTLNILINCFCHM 355
Query: 465 NKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
+ + + + +++ P T ++
Sbjct: 356 GQITFGFSVLAKILKRGYPPSTVTLNTLI 384
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 92/195 (47%), Gaps = 6/195 (3%)
Query: 322 DFEEAIRITEKMKIV--GSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTS 379
+ ++A+ ++ KI+ G PD+ N LI L +V+EA++ + ++ G +
Sbjct: 41 NVDDAVSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHD-KLLAQGFQLNQV 99
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLD 439
++ T+I G A L +++ KPNV+ ++ ++ + K E L
Sbjct: 100 SYATLINGVCRIGDTRAAIKFLRKIDG-RLAKPNVEMYNTIIDALCKYQLVSEAYG-LFS 157
Query: 440 DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQK 499
+M K +S ++ TY+ +I+G C K + A L M+ I P T +++D + ++
Sbjct: 158 EMTVKG-ISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKE 216
Query: 500 HMYDAAEKIEAVMKK 514
A+ + AVM K
Sbjct: 217 GKVKEAKSVLAVMLK 231
>gi|356530296|ref|XP_003533718.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 830
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 111/445 (24%), Positives = 204/445 (45%), Gaps = 56/445 (12%)
Query: 113 DWKSALGIFRWA----GSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVT 167
+W+ AL +F W GS +++ E+MV ILG+ Q L + + + + +
Sbjct: 156 NWERALLLFEWGWLHFGSDQNLRLDNQVVELMVRILGRESQHSIASKLFDLIPVEKYSLD 215
Query: 168 LNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK------------ 215
+ ++ ++ +G+++ A+ FD++ GL+ T N++LD K
Sbjct: 216 VRAYTTILHAYARSGKYKRAIDLFDKMEGIGLDPTLVTYNVMLDVYGKMGRSWGRILELL 275
Query: 216 ------------------------EGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKI 250
EG ++ AR ELK + P +N + + K
Sbjct: 276 DEMRSKGLEFDEFTCSTVISACGREGMLDEARKFLAELKLNGYKPGTVMYNSMLQVFGKA 335
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
EA ++EM+ + C P I+Y+ + +Y R + ++D M ++G PN +TY
Sbjct: 336 GIYTEALSILKEMEDNNCPPDSITYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITY 395
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
TTV+ K+G ++A+R+ KMK +G P+ +N ++ LG+ SR ++ + V EM
Sbjct: 396 TTVIDAYGKAGREDDALRLFSKMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVL-CEMK 454
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHC--KPNVQTFHPLLKSCFKTG 428
NG AP+ +T+NTM+ + S G H VL EM ++C +P+ TF+ L+ S + G
Sbjct: 455 LNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREM---KNCGFEPDKDTFNTLISSYARCG 511
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ +++ +MV K + +TTY +++ L + A + ++M P +
Sbjct: 512 SEVDS-AKMYGEMV-KSGFTPCVTTYNALLNALAHRGDWKAAESVIQDMQTKGFKPNETS 569
Query: 489 CRLILDEVKQKHMYDAAEKIEAVMK 513
L+L H Y A + + K
Sbjct: 570 YSLLL------HCYSKAGNVRGIEK 588
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 109/461 (23%), Positives = 196/461 (42%), Gaps = 50/461 (10%)
Query: 94 NAIQPSHYLVNKLIHRFKDD--WKSALGIFRWA--GSCPGYEHSSEIYEMMVDILGKVRQ 149
N +P + N ++ F + AL I + +CP S Y + +
Sbjct: 316 NGYKPGTVMYNSMLQVFGKAGIYTEALSILKEMEDNNCP---PDSITYNELAATYVRAGF 372
Query: 150 MDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNL 208
+D+ A+++ M SKG + T V+ + AG+ +DA+R F ++ G N T N
Sbjct: 373 LDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSKMKDLGCAPNVYTYNS 432
Query: 209 LLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG 267
+L L K+ + E V E+K + PN T+N + + + + ++EMK G
Sbjct: 433 VLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCG 492
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
P +++T+I SY R + ++ EM G P V TY +++ LA GD++ A
Sbjct: 493 FEPDKDTFNTLISSYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALAHRGDWKAAE 552
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRAS------RVQEAVYVYQV-------------- 367
+ + M+ G KP+ ++ L++ +A +V++ +Y QV
Sbjct: 553 SVIQDMQTKGFKPNETSYSLLLHCYSKAGNVRGIEKVEKEIYDGQVFPSWILLRTLVLSN 612
Query: 368 --------------EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPN 413
++ + G PD N+M++MFS + KA +L +++ +PN
Sbjct: 613 HKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFSRNKMFSKAREMLHFIHEC-GLQPN 671
Query: 414 VQTFHPLLKSCFKTGKTDEC--LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAY 471
+ T++ L+ + DEC ++L + N D+ +Y VI G CR + A
Sbjct: 672 LFTYNCLMDLYV---REDECWKAEEVLKGIQNSVP-EPDVVSYNTVIKGFCRKGLMQEAI 727
Query: 472 LLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
+ EM I P T L ++D A ++ M
Sbjct: 728 RVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFM 768
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 140/306 (45%), Gaps = 11/306 (3%)
Query: 169 NTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE 228
+T ++ ++ G D+ + + E+ G T N LL+ L G + A SV +
Sbjct: 498 DTFNTLISSYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALAHRGDWKAAESVIQD 557
Query: 229 LKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYN 287
+++ PN ++++ +H + K V + +E+ P I T++ S + +
Sbjct: 558 MQTKGFKPNETSYSLLLHCYSKAGNVRGIEKVEKEIYDGQVFPSWILLRTLVLSNHKCRH 617
Query: 288 FSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNC 347
+ D++Q G P++V +++S +++ F +A + + G +P+ +NC
Sbjct: 618 LRGMERAFDQLQKYGYKPDLVVINSMLSMFSRNKMFSKAREMLHFIHECGLQPNLFTYNC 677
Query: 348 LIYTLGRAS---RVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
L+ R + +E + Q +PE PD ++NT+I F G ++A VL EM
Sbjct: 678 LMDLYVREDECWKAEEVLKGIQNSVPE----PDVVSYNTVIKGFCRKGLMQEAIRVLSEM 733
Query: 405 NKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRA 464
+ +P + T++ L DE ++++ M+ +H+ TY +++ G C+A
Sbjct: 734 TT-KGIQPTIVTYNTFLSGYAGMELFDEA-NEVIRFMI-EHNCRPSELTYKILVDGYCKA 790
Query: 465 NKCEWA 470
K E A
Sbjct: 791 GKHEEA 796
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 139/318 (43%), Gaps = 7/318 (2%)
Query: 120 IFRWAGSCPGYEHSSEIYEMMVDILGKV-RQMDQMRALLEEMSKGHIVTLNTIAKVMRRF 178
+ R +C G+E + + ++ + ++D + E + G + T ++
Sbjct: 484 VLREMKNC-GFEPDKDTFNTLISSYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNAL 542
Query: 179 SGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNA 237
+ G W+ A ++ T G + N + +LLL K G V V E+ + P+
Sbjct: 543 AHRGDWKAAESVIQDMQTKGFKPNETSYSLLLHCYSKAGNVRGIEKVEKEIYDGQVFPSW 602
Query: 238 HTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDE 297
+ K + + +++ +G P ++ ++++ + R FSK E+L
Sbjct: 603 ILLRTLVLSNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFSRNKMFSKAREMLHF 662
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
+ G PN+ TY +M + + +A + + ++ +PD +N +I R
Sbjct: 663 IHECGLQPNLFTYNCLMDLYVREDECWKAEEVLKGIQNSVPEPDVVSYNTVIKGFCRKGL 722
Query: 358 VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH-CKPNVQT 416
+QEA+ V EM G+ P T+NT ++ ++ ++A V+ M +EH C+P+ T
Sbjct: 723 MQEAIRVLS-EMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFM--IEHNCRPSELT 779
Query: 417 FHPLLKSCFKTGKTDECL 434
+ L+ K GK +E +
Sbjct: 780 YKILVDGYCKAGKHEEAM 797
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 136/309 (44%), Gaps = 17/309 (5%)
Query: 65 PDID----VIISKVHVGSSED--EVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSAL 118
PD D +I S GS D +++ + + + + L+N L HR DWK+A
Sbjct: 495 PDKDTFNTLISSYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALAHR--GDWKAAE 552
Query: 119 GIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI----VTLNTIAKV 174
+ + G++ + Y +++ K + + + +E+ G + + L T+
Sbjct: 553 SVIQ-DMQTKGFKPNETSYSLLLHCYSKAGNVRGIEKVEKEIYDGQVFPSWILLRTLVLS 611
Query: 175 MRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-I 233
+ E R FD+L +G + + +N +L + AR + + C +
Sbjct: 612 NHKCRHLRGME---RAFDQLQKYGYKPDLVVINSMLSMFSRNKMFSKAREMLHFIHECGL 668
Query: 234 PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
PN T+N + + + + +A+ ++ ++ P V+SY+T+I+ +CR+ +
Sbjct: 669 QPNLFTYNCLMDLYVREDECWKAEEVLKGIQNSVPEPDVVSYNTVIKGFCRKGLMQEAIR 728
Query: 294 LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLG 353
+L EM +G P +VTY T +S A F+EA + M +P + L+
Sbjct: 729 VLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSELTYKILVDGYC 788
Query: 354 RASRVQEAV 362
+A + +EA+
Sbjct: 789 KAGKHEEAM 797
>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
Length = 700
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 114/505 (22%), Positives = 219/505 (43%), Gaps = 84/505 (16%)
Query: 80 EDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEM 139
+D S+ QD +A+ + + D ++AL F+WA GY+H+++ Y
Sbjct: 170 QDNFLNSMAQDLNPDAVVK--------VLNLQTDAQNALRFFQWADKQEGYDHNTDAYFT 221
Query: 140 MVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
M+DILG+ + ++++LL++M ++G +T + + + + +G++++++ F+ + G
Sbjct: 222 MIDILGRAKMFTELQSLLQKMQTQGREITRSMLHSFVMSYGRSGRFKESLEAFNLMKEMG 281
Query: 199 LEKN--TETMNLLLDTLCKEGKVELARSVFLEL--------------------------- 229
E N +L +L K K+++A ++F ++
Sbjct: 282 YEPGLIDTAYNSVLVSLVKNKKLDMAENLFAQMINNGVSCNNLTYTSMIQCFFLKEKMED 341
Query: 230 ---------KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQ 280
++ P+ T+ I I CK +++A +Q+M+ +GC P + +Y+ +IQ
Sbjct: 342 AMKLLDDMIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQ 401
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
C + EL+ M+ G PPN+ TYT + L K + A + + G KP
Sbjct: 402 GLCAVRRPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKP 461
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
+ +N L+ R SR+ EA+ + + EM +N PD T+ T+I A +
Sbjct: 462 NRVTYNTLLNGYCRGSRLIEAMDILK-EMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRM 520
Query: 401 LEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE-------------------------CLS 435
+EM + N T + L + + G + CLS
Sbjct: 521 HDEMENKGY-DVNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHCLS 579
Query: 436 ---------QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
LL +M+NK + S ++TTY +I G CR + + A + MI + I P
Sbjct: 580 TAGEMEEAQALLYEMINKGY-SPNLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPDT 638
Query: 487 QTCRLILDEVKQKHMYDAAEKIEAV 511
+ +++ E + A+++ A
Sbjct: 639 GSYNILIKEFHNQGRTQDADQLYAT 663
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 103/283 (36%), Gaps = 38/283 (13%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDA 187
G E + Y ++ L VR+ ++ L+ M +G + + T + + + A
Sbjct: 388 GCEPNIYTYNALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRA 447
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIP----------- 234
F+E GL+ N T N LL+ C+ ++ A + E+ C P
Sbjct: 448 KEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQG 507
Query: 235 -------PNA----------------HTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPC 271
P+A T NI G ++ +A + MK G
Sbjct: 508 LVQGNQLPDALRMHDEMENKGYDVNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAYS 567
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
Y I + LL EM +G PN+ TY T++ + G ++A +
Sbjct: 568 ASDYYLAIHCLSTAGEMEEAQALLYEMINKGYSPNLTTYNTMIKGFCRQGRLDDADAMLN 627
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
M G PD+ +N LI R Q+A +Y + E GV
Sbjct: 628 FMIENGIGPDTGSYNILIKEFHNQGRTQDADQLYATAL-ERGV 669
>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
Length = 738
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 191/383 (49%), Gaps = 10/383 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEE-MSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++D K+ + + LL++ + KG + T ++ G E A+ F+E
Sbjct: 296 YNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQ 355
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRV 253
G++ + N L+ LC +G + A V E+ + C P+ T+NI I+G CK+ +
Sbjct: 356 AKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGC-HPDIQTYNIVINGLCKMGNI 414
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
+A + + G P V +++T+I YC++ +L++ M G P+ +TY +V
Sbjct: 415 SDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSV 474
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
++ L K+G E ++M + G P+ +N LI R+++++EA V V+M + G
Sbjct: 475 LNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVI-VKMSQEG 533
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
+ PD +FNT+I F +G E A+ + +++ + + TF+ L+ + +GK +
Sbjct: 534 LHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGY-SATADTFNTLIGAF--SGKLNMH 590
Query: 434 LSQ-LLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLI 492
+++ + D+M++K H + D TY ++I G C+ + AY+ EMI P T +
Sbjct: 591 MAEKIFDEMLSKGHRA-DSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRV 649
Query: 493 LDEVKQKHMYDAAEKIEAVMKKL 515
++ + H A I +M K+
Sbjct: 650 INSLTVNHRVFQAVGIIHIMVKI 672
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 170/362 (46%), Gaps = 5/362 (1%)
Query: 154 RALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDT 212
R L ++M H+ L KV+ G +A ++ G+ N T N+ +
Sbjct: 174 RQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRG 233
Query: 213 LCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCV 272
LC+ G++ A + +++ P+ T+N I G CK + EA ++ M GC P
Sbjct: 234 LCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDD 293
Query: 273 ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEK 332
+Y+TII YC+ + ELL + +G P+ VTY ++++ L GD E A+ + +
Sbjct: 294 FTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNE 353
Query: 333 MKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
+ G KPD +N L+ L + A+ V EM E G PD T+N +I G
Sbjct: 354 AQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMN-EMAEEGCHPDIQTYNIVINGLCKMG 412
Query: 393 HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
+ A V+ + ++ P+V TF+ L+ K K D L QL++ M ++ ++ D
Sbjct: 413 NISDATVVMNDA-IMKGYLPDVFTFNTLIDGYCKRLKLDSAL-QLVERMW-EYGIAPDTI 469
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
TY V++GLC+A K F+EMI P T ++++ + + + A K+ M
Sbjct: 470 TYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKM 529
Query: 513 KK 514
+
Sbjct: 530 SQ 531
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 162/331 (48%), Gaps = 12/331 (3%)
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIH 245
A++ +E+ G + +T N++++ LCK G + A V + + P+ TFN I
Sbjct: 382 ALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLID 441
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G+CK ++D A ++ M +G P I+Y++++ C+ ++V E EM +GC P
Sbjct: 442 GYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHP 501
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N +TY ++ +S EEA ++ KM G PD+ FN LIY R ++ A ++
Sbjct: 502 NPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLF 561
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
Q ++ E G + TFNT+I FS + A + +EM H + + T+ L+
Sbjct: 562 Q-KLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGH-RADSYTYRVLIDGSC 619
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
KT D L+ +M+ K + ++T+ VI+ L ++ A + M+ + P
Sbjct: 620 KTANVDRAYMHLV-EMIKKGFIP-SMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP- 676
Query: 486 YQTCRLILDEVKQKHMYDAAEKI--EAVMKK 514
+ IL+ K++ AA KI E +MKK
Sbjct: 677 -EVVDTILNADKKE---IAAPKILVEDLMKK 703
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 132/311 (42%), Gaps = 10/311 (3%)
Query: 175 MRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCI 233
+R ++ AG+ DAV F+ + F N ++D L + A V++ L + +
Sbjct: 60 IRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGV 119
Query: 234 PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
P+ HT I + +C R A ++ + G ++Y T++ + +
Sbjct: 120 SPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQ 175
Query: 294 LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLG 353
L D+M PN+ + V+ L K GD EA + K+ G + +N I L
Sbjct: 176 LFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLC 235
Query: 354 RASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPN 413
A R+ EAV + V+ PD T+NT+I ++A H L M + C P+
Sbjct: 236 EAGRLPEAVRL--VDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMN-QGCLPD 292
Query: 414 VQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLL 473
T++ ++ K E ++LL D V K + D TY +I+GLC E A L
Sbjct: 293 DFTYNTIIDGYCKISMVQEA-TELLKDAVFKGFVP-DQVTYCSLINGLCAEGDVERALEL 350
Query: 474 FKEMIGHDITP 484
F E I P
Sbjct: 351 FNEAQAKGIKP 361
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 84/203 (41%), Gaps = 8/203 (3%)
Query: 275 YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
Y I++Y R + + M CPP Y +M L + ++A ++ +M
Sbjct: 56 YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 115
Query: 335 IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHH 394
G PD + + +R A+ + + +P G + T++ HGH
Sbjct: 116 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRA-LPHRGAV----AYCTVVCGLYAHGHT 170
Query: 395 EKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTY 454
A + ++M H PN+ F+ +L + K G E + LL V + +S+++ TY
Sbjct: 171 HDARQLFDQMLH-THVFPNLAAFNKVLHALCKRGDVLE--AGLLLGKVIQRGMSINLFTY 227
Query: 455 TLVIHGLCRANKCEWAYLLFKEM 477
+ I GLC A + A L M
Sbjct: 228 NIWIRGLCEAGRLPEAVRLVDGM 250
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 7/147 (4%)
Query: 157 LEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKE 216
LEE KG+ T +T ++ FSG A + FDE+ + G ++ T +L+D CK
Sbjct: 564 LEE--KGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKT 621
Query: 217 GKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISY 275
V+ A +E+ K P+ TF I+ +RV +A I M G P V+
Sbjct: 622 ANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV-- 679
Query: 276 STIIQSYCRQYNFSKVYELLDEMQAQG 302
TI+ + ++ K+ L++++ +G
Sbjct: 680 DTILNADKKEIAAPKI--LVEDLMKKG 704
>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
Length = 988
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 173/376 (46%), Gaps = 24/376 (6%)
Query: 158 EEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEG 217
E + +G I +T +KV+ A + E A F+E+ GL + T +++D+ CK G
Sbjct: 473 EMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAG 532
Query: 218 KVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYS 276
+E AR F E++ PN T+ IH + K +V A + M GC P +++YS
Sbjct: 533 LIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYS 592
Query: 277 TIIQSYCRQYNFSKVYELLDEM-QAQGCP----------------PNVVTYTTVMSYLAK 319
+I +C+ K ++ + M ++ P PNVV Y ++ K
Sbjct: 593 ALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCK 652
Query: 320 SGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTS 379
EEA ++ + M + G +P+ ++ LI L + ++ EA V + EM E+G
Sbjct: 653 LHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV-KAEMSEHGFPATLY 711
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEH-CKPNVQTFHPLLKSCFKTGKTDECLSQLL 438
T++++I + + A VL +M LE+ C PNV + ++ K GKTDE L
Sbjct: 712 TYSSLIDRYFKVKRQDLASKVLSKM--LENSCAPNVVIYTEMIDGLCKVGKTDEAYK--L 767
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQ 498
M+ + ++ TYT +I G R K E L + M + P Y T R+++D +
Sbjct: 768 MQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCK 827
Query: 499 KHMYDAAEKIEAVMKK 514
D A + MK+
Sbjct: 828 NGALDVAHNLLEEMKQ 843
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 107/410 (26%), Positives = 184/410 (44%), Gaps = 57/410 (13%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL- 194
Y ++ K +++ L E M S+G + + T + ++ AGQ E A + F+ +
Sbjct: 556 YTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMC 615
Query: 195 GTFGL-----------EKNTETMNL-----LLDTLCKEGKVELARSVF--LELKSCIPPN 236
G+ + + N+E N+ LLD CK +VE AR + + ++ C PN
Sbjct: 616 GSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGC-EPN 674
Query: 237 AHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLD 296
++ I G CK+ ++DEAQ EM HG + +YS++I Y + ++L
Sbjct: 675 QIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLS 734
Query: 297 EMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRAS 356
+M C PNVV YT ++ L K G +EA ++ + M+ G +P+ + +I GR
Sbjct: 735 KMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIG 794
Query: 357 RVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQT 416
+++ + + + M GVAP+ T+ +I +G + A ++LEEM K H +
Sbjct: 795 KIETCLELLE-RMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM-KQTHWPTHAAG 852
Query: 417 FHPLLKSCFK-----TGKTDECLSQ-----------LLDDMVNKHHLSLDI--------- 451
+ +++ K G DE L+D+++ L + +
Sbjct: 853 YRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATF 912
Query: 452 --------TTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT-CRLI 492
+TY +I LC ANK + A+ LF EM + P QT C LI
Sbjct: 913 SATLVDYSSTYNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLI 962
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 118/478 (24%), Positives = 210/478 (43%), Gaps = 36/478 (7%)
Query: 47 DGARLDHHQVLCVDSPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQP-SHYLVNK 105
D +D HQV+ + + D I V G D+VF S Q + + S LV +
Sbjct: 81 DSGNVDLHQVVPIITQSSIDARAIADAVSGG---DDVFGSKSQKFLRQFREKLSESLVIE 137
Query: 106 LIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQM--RALLEEMSKG 163
++ R + + + F WAG GY+H+S +Y +VD++ VR D+ LL+++
Sbjct: 138 VL-RLIERPSAVISFFVWAGRQIGYKHTSPVYNALVDLI--VRDDDEKVPEELLQQIRDD 194
Query: 164 HIVTLNTIAKVM-RRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELA 222
V+ R++ +G + A+ L F + T N L+ K ++ A
Sbjct: 195 DKEVFGEFLNVLVRKYCRSGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSA 254
Query: 223 RSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQS 281
V E+ + + + T + + CK+ + EA + M+ P + Y+ +I
Sbjct: 255 SLVHREMSLANLRMDGFTLRCYAYSLCKVGKWREA---LTLMETENFVPDTVFYTKLISG 311
Query: 282 YCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPD 341
C F + + L+ M+A C PNVVTY+T++ R+ M + G P
Sbjct: 312 LCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPS 371
Query: 342 SRFFNCLIYTLGRASRVQEAVYVYQV--EMPENGVAPDTSTFNTMITMFSHHGHHEK-AF 398
+ FN L++ + + Y Y++ +M + G P +N +I S G + +
Sbjct: 372 PKIFNSLVHAYCTSG---DHSYAYKLLKKMVKCGHTPGYVVYNILIG--SICGDKDSLSC 426
Query: 399 HVLEEMNK---------LEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSL 449
H+LE K + K NV +F L S GK ++ S ++ +M+ + +
Sbjct: 427 HLLELAEKAYSEMLATGVVLNKINVSSFTRCLCS---AGKYEKAFS-VIREMIGQGFIP- 481
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEK 507
D +TY+ V+ LC A+K E A+LLF+EM + T +++D + + + A K
Sbjct: 482 DTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARK 539
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 104/425 (24%), Positives = 191/425 (44%), Gaps = 33/425 (7%)
Query: 29 SENC-SHIVS-SSPIESYCSDGARLDHHQVL--CVDSPRLPDIDVIISKVHVGSSE--DE 82
SE C +IV+ S+ I+ +C G Q+ S +PD+D+ + +SE +
Sbjct: 581 SEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNV 640
Query: 83 VFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVD 142
V D C +HR ++ K A S G E + +Y+ ++D
Sbjct: 641 VIYGALLDGFCK------------LHRVEEARK-----LLDAMSMEGCEPNQIVYDALID 683
Query: 143 ILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEK 201
L KV ++D+ + + EMS+ G TL T + ++ R+ + + A + ++
Sbjct: 684 GLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAP 743
Query: 202 NTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWT 259
N ++D LCK GK + A + +E K C PN T+ I G+ +I +++
Sbjct: 744 NVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGC-QPNVVTYTAMIDGFGRIGKIETCLEL 802
Query: 260 IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK 319
++ M G P ++Y +I C+ + LL+EM+ P + Y V+ K
Sbjct: 803 LERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGFNK 862
Query: 320 SGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD-T 378
+F E++ + +++ + P + L+ L +A R++ A+ + + + D +
Sbjct: 863 --EFIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYS 920
Query: 379 STFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLL 438
ST+N++I +KAF + EM+K + P +QTF L+K F+ K E L LL
Sbjct: 921 STYNSLIESLCLANKVDKAFRLFSEMSK-KGVIPEMQTFCSLIKGLFRNSKISEAL--LL 977
Query: 439 DDMVN 443
D ++
Sbjct: 978 LDFIS 982
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 102/243 (41%), Gaps = 13/243 (5%)
Query: 276 STIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKI 335
+ +++ YCR +FS E L ++ P+ TY ++ K+ + A + +M +
Sbjct: 204 NVLVRKYCRSGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSL 263
Query: 336 VGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHE 395
+ D C Y+L + + +EA+ + + E PDT + +I+ E
Sbjct: 264 ANLRMDGFTLRCYAYSLCKVGKWREALTLMETE----NFVPDTVFYTKLISGLCEASLFE 319
Query: 396 KAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYT 455
+A L M + C PNV T+ LL C + C L M+ + S I +
Sbjct: 320 EAMDFLNRM-RATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKI--FN 376
Query: 456 LVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQK------HMYDAAEKIE 509
++H C + +AY L K+M+ TP Y +++ + H+ + AEK
Sbjct: 377 SLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEKAY 436
Query: 510 AVM 512
+ M
Sbjct: 437 SEM 439
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 81/184 (44%), Gaps = 10/184 (5%)
Query: 125 GSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVT-LNTIAKVMRRFSGAGQ 183
G P Y Y +++D K +D LLEEM + H T KV+ F+ +
Sbjct: 810 GVAPNYV----TYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGFNK--E 863
Query: 184 WEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL---KSCIPPNAHTF 240
+ +++ DE+G LL+D L K ++E+A + E+ + + + T+
Sbjct: 864 FIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTY 923
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
N I C N+VD+A EM G P + ++ ++I+ R S+ LLD +
Sbjct: 924 NSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEALLLLDFISH 983
Query: 301 QGCP 304
CP
Sbjct: 984 MVCP 987
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 185/392 (47%), Gaps = 47/392 (11%)
Query: 137 YEMMVDIL---GKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
+ +M+++L GK+++ + L+E + K ++VT NTI + + G+ E A FD
Sbjct: 194 FNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTI---IHGYCSRGRVEGARMIFD 250
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKIN 251
+ G++ ++ T + +CKEGK+E A + ++K + P A T+N I G+C
Sbjct: 251 LMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKG 310
Query: 252 -----------------------------------RVDEAQWTIQEMKGHGCHPCVISYS 276
++DEA I+EM G P ++Y+
Sbjct: 311 NLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYN 370
Query: 277 TIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIV 336
+I YCR N K + L DEM ++G P VTYT+++ L+K G ++A + EK+
Sbjct: 371 ILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRK 430
Query: 337 GSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEK 396
G PD FN LI + A + + EM + V PD TFNT++ G E
Sbjct: 431 GIFPDLIMFNALIDGHCANGNMDRAFAMLK-EMDQMKVVPDEVTFNTLMQGRCREGKVEA 489
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTL 456
A ++EEM K KP+ +++ L+ K G + ++ D+M++ + + TY
Sbjct: 490 ARELIEEM-KSRGIKPDHISYNTLISGYSKRGDMKDAF-RVRDEMLSIG-FNPTLLTYNA 546
Query: 457 VIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+I GLC+ + + A L KEMI ITP T
Sbjct: 547 LIQGLCKNEEGDHAEQLLKEMISKGITPNDNT 578
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 98/348 (28%), Positives = 169/348 (48%), Gaps = 15/348 (4%)
Query: 162 KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVEL 221
K +VT N + V+ + G+ + A + G++ N T N ++ C G+VE
Sbjct: 188 KSSVVTFNIMINVLCK---EGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEG 244
Query: 222 ARSVFLELKSC--IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
AR +F +L C + P+++T+ FI G CK +++EA +++MK G P ++Y+T+I
Sbjct: 245 ARMIF-DLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLI 303
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
YC + N ++ D+M +G P V TY ++ L +EA I ++M G
Sbjct: 304 DGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLV 363
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
PDS +N LI R V++A ++ EM G+ P T+ ++I + S G ++A
Sbjct: 364 PDSVTYNILINGYCRCGNVKKAFTLHD-EMISKGIQPTRVTYTSLIYVLSKRGRMKQADD 422
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIH 459
+ E++ + + P++ F+ L+ G D + L + +++ + D T+ ++
Sbjct: 423 LFEKIVR-KGIFPDLIMFNALIDGHCANGNMDRAFAMLKE--MDQMKVVPDEVTFNTLMQ 479
Query: 460 GLCRANKCEWAYLLFKEMIGHDITP---RYQTCRLILDEVKQKHMYDA 504
G CR K E A L +EM I P Y T LI K+ M DA
Sbjct: 480 GRCREGKVEAARELIEEMKSRGIKPDHISYNT--LISGYSKRGDMKDA 525
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 181/380 (47%), Gaps = 6/380 (1%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
+Y++++ ++++ D + M KG I ++ ++ F + + E A + E+
Sbjct: 123 LYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEM 182
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRV 253
++ + T N++++ LCKEGK++ A+ +++ I PN T+N IHG+C RV
Sbjct: 183 FRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRV 242
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
+ A+ MK G P +Y + I C++ + +L++M+ G P VTY T+
Sbjct: 243 EGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTL 302
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
+ G+ E A +KM G P +N LI+ L ++ EA + + EM E G
Sbjct: 303 IDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIK-EMSEKG 361
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
+ PD+ T+N +I + G+ +KAF + +EM + +P T+ L+ K G+ +
Sbjct: 362 LVPDSVTYNILINGYCRCGNVKKAFTLHDEMIS-KGIQPTRVTYTSLIYVLSKRGRMKQA 420
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
L + +V K D+ + +I G C + A+ + KEM + P T ++
Sbjct: 421 -DDLFEKIVRKGIFP-DLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLM 478
Query: 494 DEVKQKHMYDAAEKIEAVMK 513
++ +AA ++ MK
Sbjct: 479 QGRCREGKVEAARELIEEMK 498
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/331 (29%), Positives = 158/331 (47%), Gaps = 11/331 (3%)
Query: 190 TFDELGT----FGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFI 244
F+ELG G+ K +LL+ C+ + + A F +K + P+ H N +
Sbjct: 105 VFNELGVARGVLGI-KTYVLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDML 163
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
+ K NR ++A EM V++++ +I C++ K E + M+A G
Sbjct: 164 SLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIK 223
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
PNVVTY T++ G E A I + MK G KPDS + I + + +++EA +
Sbjct: 224 PNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGM 283
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
+ +M E G+ P T+NT+I + + G+ E AF ++M + E P V T++ L+ +
Sbjct: 284 LE-KMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVR-EGLMPTVSTYNMLIHAL 341
Query: 425 FKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
F K DE ++ +M K L D TY ++I+G CR + A+ L EMI I P
Sbjct: 342 FLDCKMDEA-DGIIKEMSEK-GLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQP 399
Query: 485 -RYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
R LI K+ M A + E +++K
Sbjct: 400 TRVTYTSLIYVLSKRGRMKQADDLFEKIVRK 430
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 145/295 (49%), Gaps = 6/295 (2%)
Query: 95 AIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQ 152
++P+ N LI + K + + A +R G + Y M++ L +MD+
Sbjct: 291 GLRPTAVTYNTLIDGYCNKGNLEMAFD-YRDKMVREGLMPTVSTYNMLIHALFLDCKMDE 349
Query: 153 MRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLD 211
+++EMS KG + T ++ + G + A DE+ + G++ T L+
Sbjct: 350 ADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIY 409
Query: 212 TLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHP 270
L K G+++ A +F ++ + I P+ FN I G C +D A ++EM P
Sbjct: 410 VLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVP 469
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRIT 330
++++T++Q CR+ EL++EM+++G P+ ++Y T++S +K GD ++A R+
Sbjct: 470 DEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVR 529
Query: 331 EKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMI 385
++M +G P +N LI L + A + + EM G+ P+ +T+ ++I
Sbjct: 530 DEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLK-EMISKGITPNDNTYLSLI 583
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 127/266 (47%), Gaps = 5/266 (1%)
Query: 92 VCNAIQPSHYLVNKLIHRFKDDWK--SALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQ 149
V + P+ N LIH D K A GI + S G S Y ++++ +
Sbjct: 323 VREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEM-SEKGLVPDSVTYNILINGYCRCGN 381
Query: 150 MDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNL 208
+ + L +EM SKG T T ++ S G+ + A F+++ G+ + N
Sbjct: 382 VKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNA 441
Query: 209 LLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG 267
L+D C G ++ A ++ E+ + P+ TFN + G C+ +V+ A+ I+EMK G
Sbjct: 442 LIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRG 501
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
P ISY+T+I Y ++ + + + DEM + G P ++TY ++ L K+ + + A
Sbjct: 502 IKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAE 561
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLG 353
++ ++M G P+ + LI +G
Sbjct: 562 QLLKEMISKGITPNDNTYLSLIEGIG 587
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 181/398 (45%), Gaps = 17/398 (4%)
Query: 94 NAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMD 151
+ +QP+ ++ K D SAL + R + IY ++D L K +
Sbjct: 213 DGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHS 272
Query: 152 QMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLL 210
+ L EM KG L T ++ F +G+W DA + E+ + + T N L+
Sbjct: 273 DAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALI 332
Query: 211 DTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCH 269
+ KEGK A ++ E L I PN T+N I G+CK +R+D A+ M GC
Sbjct: 333 NAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCS 392
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI 329
P V +++T+I YC ELL EM +G N VTY T++ GD A+ +
Sbjct: 393 PDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDL 452
Query: 330 TEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM----------PENGVAPDTS 379
+++M G PD N L+ L ++++A+ +++ P NGV PD
Sbjct: 453 SQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVL 512
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLD 439
T+N +I + G +A + EEM P+ T+ ++ K + DE +Q+
Sbjct: 513 TYNILICGLINEGKFLEAEELYEEMPH-RGIVPDTITYSSMIDGLCKQSRLDEA-TQMFV 570
Query: 440 DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
M +K S ++ T+ +I+G C+A + + LF EM
Sbjct: 571 SMGSK-SFSPNVVTFNTLINGYCKAGRVDDGLELFCEM 607
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 181/412 (43%), Gaps = 41/412 (9%)
Query: 140 MVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
++ ++ ++ + D + +L ++M + I + + +++ F + A+ TF ++ G
Sbjct: 85 LMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLG 144
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQ 257
L + T LL LC E +V A F ++ ++ PN TF ++G C+ R+ EA
Sbjct: 145 LHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAV 204
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ-AQGCPPNVVTYTTVMSY 316
+ M G P I+Y TI+ C++ + LL +M+ PNVV Y+ ++
Sbjct: 205 ALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDS 264
Query: 317 LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
L K G +A + +M+ G PD +N +I + R +A + Q EM E ++P
Sbjct: 265 LCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQ-EMLERKISP 323
Query: 377 DTSTFNTMITMFSHHGHHEKAFHVLEEM----------------------NKLE------ 408
D T+N +I F G +A + +EM ++L+
Sbjct: 324 DVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMF 383
Query: 409 ------HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC 462
C P+V TF L+ + D+ + +LL +M + L + TY +IHG C
Sbjct: 384 YLMATKGCSPDVFTFTTLIDGYCGAKRIDDGM-ELLHEM-PRRGLVANTVTYNTLIHGFC 441
Query: 463 RANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEAVMK 513
A L ++MI + P TC +LD + + DA E +A+ K
Sbjct: 442 LVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQK 493
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 150/321 (46%), Gaps = 12/321 (3%)
Query: 202 NTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTI 260
N + ++D+LCK+G+ A+++F E++ I P+ T+N I G+C R +A+ +
Sbjct: 254 NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLL 313
Query: 261 QEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKS 320
QEM P V++Y+ +I ++ ++ F + EL DEM +G PN +TY +++ K
Sbjct: 314 QEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQ 373
Query: 321 GDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTST 380
+ A + M G PD F LI A R+ + + + EMP G+ +T T
Sbjct: 374 DRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLH-EMPRRGLVANTVT 432
Query: 381 FNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL--- 437
+NT+I F G A + ++M C P++ T + LL GK + L
Sbjct: 433 YNTLIHGFCLVGDLNAALDLSQQMISSGVC-PDIVTCNTLLDGLCDNGKLKDALEMFKAM 491
Query: 438 ------LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRL 491
LD + + D+ TY ++I GL K A L++EM I P T
Sbjct: 492 QKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSS 551
Query: 492 ILDEVKQKHMYDAAEKIEAVM 512
++D + ++ D A ++ M
Sbjct: 552 MIDGLCKQSRLDEATQMFVSM 572
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 174/385 (45%), Gaps = 19/385 (4%)
Query: 38 SSPIESYCSDGARLDHHQVL--CVDSPRLPDIDVIISKVHVGSSEDEVFQS--LKQDHVC 93
+S I +CS G D Q+L ++ PD+ + ++ E + F++ L + +
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLP 353
Query: 94 NAIQPSHYLVNKLIHRF-KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQ 152
I P+ N +I F K D A + + G + ++D +++D
Sbjct: 354 RGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDD 413
Query: 153 MRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLD 211
LL EM + G + T ++ F G A+ ++ + G+ + T N LLD
Sbjct: 414 GMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLD 473
Query: 212 TLCKEGKVELARSVF-------LELKSCIP-----PNAHTFNIFIHGWCKINRVDEAQWT 259
LC GK++ A +F ++L + P P+ T+NI I G + EA+
Sbjct: 474 GLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEEL 533
Query: 260 IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK 319
+EM G P I+YS++I C+Q + ++ M ++ PNVVT+ T+++ K
Sbjct: 534 YEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCK 593
Query: 320 SGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTS 379
+G ++ + + +M G D+ + LIY + + A+ ++Q EM +GV PDT
Sbjct: 594 AGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQ-EMISSGVYPDTI 652
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEM 404
T M+T F E+A +LE++
Sbjct: 653 TIRNMLTGFWSKEELERAVAMLEDL 677
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 151/389 (38%), Gaps = 91/389 (23%)
Query: 153 MRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDT 212
++ +LE +VT N + + F G++ +A +DE+ G+ NT T N ++D
Sbjct: 313 LQEMLERKISPDVVTYNAL---INAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDG 369
Query: 213 LCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHP 270
CK+ +++ A +F + K C P+ TF I G+C R+D+ + EM G
Sbjct: 370 FCKQDRLDAAEDMFYLMATKGC-SPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVA 428
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRIT 330
++Y+T+I +C + + +L +M + G P++VT T++ L +G ++A+ +
Sbjct: 429 NTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMF 488
Query: 331 EKMK-----------IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDT- 378
+ M+ G +PD +N LI L + EA +Y+ EMP G+ PDT
Sbjct: 489 KAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYE-EMPHRGIVPDTI 547
Query: 379 ----------------------------------STFNTMITMFSHHGHHEKAFHVLEEM 404
TFNT+I + G + + EM
Sbjct: 548 TYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEM 607
Query: 405 NKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRA 464
+ + D Y +I+G +
Sbjct: 608 --------------------------------------GRRGIVADAIIYITLIYGFRKV 629
Query: 465 NKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
A +F+EMI + P T R +L
Sbjct: 630 GNINGALDIFQEMISSGVYPDTITIRNML 658
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 146/316 (46%), Gaps = 46/316 (14%)
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
+ ++FNI I +C +++ A T ++ G HP V++++T++ C + S+ +
Sbjct: 113 DIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFF 172
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK---------------- 339
+M C PNVVT+TT+M+ L + G EA+ + ++M G +
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232
Query: 340 --------------------PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTS 379
P+ ++ +I +L + R +A ++ EM E G+ PD
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLF-TEMQEKGIFPDLF 291
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLD 439
T+N+MI F G A +L+EM + P+V T++ L+ + K GK E ++L D
Sbjct: 292 TYNSMIVGFCSSGRWSDAEQLLQEMLE-RKISPDVVTYNALINAFVKEGKFFEA-AELYD 349
Query: 440 DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQK 499
+M+ + + + TY +I G C+ ++ + A +F M +P T ++D
Sbjct: 350 EMLPRGIIP-NTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDG---- 404
Query: 500 HMYDAAEKIEAVMKKL 515
Y A++I+ M+ L
Sbjct: 405 --YCGAKRIDDGMELL 418
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 80/155 (51%), Gaps = 1/155 (0%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTF 240
G++ +A ++E+ G+ +T T + ++D LCK+ +++ A +F+ + S PN TF
Sbjct: 525 GKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTF 584
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
N I+G+CK RVD+ EM G I Y T+I + + N + ++ EM +
Sbjct: 585 NTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMIS 644
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKI 335
G P+ +T +++ + E A+ + E +++
Sbjct: 645 SGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQM 679
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/406 (24%), Positives = 194/406 (47%), Gaps = 24/406 (5%)
Query: 128 PGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAK-------------- 173
P ++HSS MV L + R++ + +A + M + V+ + +
Sbjct: 129 PNFKHSSLSLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVKVVESLISTCFYFGSVGL 188
Query: 174 ----VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL 229
++R + A + + F L G+ + N LL L + G V+LA ++ E+
Sbjct: 189 IYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEV 248
Query: 230 -KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
+ I N +T NI ++ CK + + + + +M+G G +++Y+T+I +YCR+
Sbjct: 249 VRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLV 308
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
+ ++LL+ ++G P ++TY ++ L K G ++ A + +M +G P++ +N L
Sbjct: 309 EEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTL 368
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
+ + R + EA ++ EM GV PD +F+++I + + +GH +A EM +
Sbjct: 369 LVEICRRDNILEAQEIFD-EMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMER-S 426
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
P+ + L+ + G + L ++ D+M+ + +D+ TY ++GLC+
Sbjct: 427 GIVPDNVIYTILIDGFCRNGALSDAL-KMRDEMLARGCF-MDVVTYNTFLNGLCKKKMFA 484
Query: 469 WAYLLFKEMIGHDITPRYQT-CRLILDEVKQKHMYDAAEKIEAVMK 513
A +LF EM+ + P + T LI K +M A EA+++
Sbjct: 485 DADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVR 530
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/419 (24%), Positives = 191/419 (45%), Gaps = 46/419 (10%)
Query: 126 SCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK----GHIVTLNTI-AKVMRRFSG 180
S G E Y ++ L K+ + D+ + +L EM + + T NT+ ++ RR
Sbjct: 319 SSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRR--- 375
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHT 239
+A FDE+ G+ + + + L+ L + G + A F E+ +S I P+
Sbjct: 376 -DNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVI 434
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+ I I G+C+ + +A EM GC V++Y+T + C++ F+ L +EM
Sbjct: 435 YTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMV 494
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
+G P+ T+TT++ K G+ ++A+ + E M KPD +N LI +A +
Sbjct: 495 ERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMG 554
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
A ++ +M + PD ++ T++ F G +A ++ ++M + + +PN+ T +
Sbjct: 555 RAKELWD-DMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLE-KGIRPNLVTCNT 612
Query: 420 LLKSCFKTG---KTDECLSQLLDD---------------------------MVN---KHH 446
L+K ++G K E LS+++ + ++N K
Sbjct: 613 LIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRG 672
Query: 447 LSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT-CRLILDEVKQKHMYDA 504
L +I TY L+++G C K + A + ++MI I P T LI V Q +M +A
Sbjct: 673 LQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEA 731
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 161/346 (46%), Gaps = 6/346 (1%)
Query: 64 LPDIDVIISKVHVGSSEDEVFQSLK--QDHVCNAIQPSHYLVNKLIHRF-KDDWKSALGI 120
LPD+ S + V + ++Q+L ++ + I P + + LI F ++ S
Sbjct: 394 LPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALK 453
Query: 121 FRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFS 179
R G Y ++ L K + L EM +G + T ++R +
Sbjct: 454 MRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYC 513
Query: 180 GAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAH 238
G + A+ F+ + L+ + T N L+D CK G++ A+ ++ ++ + I P+
Sbjct: 514 KDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHI 573
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
++ ++G+C + EA +M G P +++ +T+I+ YCR + K YE L +M
Sbjct: 574 SYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKM 633
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRV 358
+ G P+ +Y T++ K + E+A + +M+ G + + +N ++ ++
Sbjct: 634 ISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKM 693
Query: 359 QEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
QEA V + +M E G+ PD +T++++I + ++AF +EM
Sbjct: 694 QEAEQVLR-KMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEM 738
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 144/319 (45%), Gaps = 9/319 (2%)
Query: 34 HIVSSSPIESYCSDGARLDHHQVLCVDSPRLPDIDVIISKVHV-GSSEDEVFQS---LKQ 89
+++ + I+ +C +GA D ++ R +DV+ + G + ++F L
Sbjct: 432 NVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFN 491
Query: 90 DHVCNAIQPSHYLVNKLIHRFKDDWK--SALGIFRWAGSCPGYEHSSEIYEMMVDILGKV 147
+ V + P Y LI + D AL +F A + Y ++D K
Sbjct: 492 EMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFE-AMVRTNLKPDKVTYNTLIDGFCKA 550
Query: 148 RQMDQMRALLEEMSKGHIVTLN-TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETM 206
+M + + L ++M + I+ + + V+ F +G +A+ D++ G+ N T
Sbjct: 551 GEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTC 610
Query: 207 NLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKG 265
N L+ C+ G + A ++ S I P++ ++N I G+ K +++A I EM+
Sbjct: 611 NTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEK 670
Query: 266 HGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEE 325
G +I+Y+ I+ +C + + ++L +M G P+ TY+++++ + +E
Sbjct: 671 RGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKE 730
Query: 326 AIRITEKMKIVGSKPDSRF 344
A R ++M G PD RF
Sbjct: 731 AFRFHDEMLQRGLVPDDRF 749
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 75/171 (43%), Gaps = 4/171 (2%)
Query: 345 FNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
++ L+ T +A +++E +Q+ + GV+ + N ++ G + A+ + E+
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQI-LRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEV 248
Query: 405 NKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRA 464
+ + NV T + ++ + K K + + L DM K + DI TY +I+ CR
Sbjct: 249 VR-GGIELNVYTLNIMVNALCKDRKFENVMF-FLSDMEGKGVFA-DIVTYNTLINAYCRE 305
Query: 465 NKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
E A+ L + P T IL + + YD A+ + M +L
Sbjct: 306 GLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQL 356
>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 657
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 195/424 (45%), Gaps = 35/424 (8%)
Query: 117 ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVM 175
AL F+ + ++H+ +E+M+ L Q+D ++ LL++M +G + + V+
Sbjct: 58 ALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVI 117
Query: 176 RRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIP 234
+ G E AV F + FG + + + N +LDTL E ++++ V+ ++K
Sbjct: 118 SVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFE 177
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQS------------- 281
PN T+N+ + CK N+VD A+ + EM GC P +SY+T+I S
Sbjct: 178 PNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQL 237
Query: 282 -----------------YCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
C++ ++ EL+ EM +G PNV++Y+T+++ L+ SG E
Sbjct: 238 AERFEPVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIE 297
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTM 384
A + +M G P+ + L+ +A+ ++ + G+ P+ +NT+
Sbjct: 298 LAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTL 357
Query: 385 ITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK 444
+ F HG+ +KA V M ++ C PN++T+ L+ K G + + + + M+
Sbjct: 358 VQGFCSHGNIDKAVSVFLHMEEI-GCSPNIRTYGSLINGFTKRGSLEGAV-YIWNKMLTS 415
Query: 445 HHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDA 504
++ YT ++ LCR +K + A L + M + P T + + D
Sbjct: 416 GCCP-NVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDW 474
Query: 505 AEKI 508
AEK+
Sbjct: 475 AEKV 478
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/437 (25%), Positives = 190/437 (43%), Gaps = 23/437 (5%)
Query: 83 VFQSLKQDHVCNAIQPSHYLVNKLIHRF-----KDDWKSALGIFRWAGSCPGYEHSSEIY 137
V++ +K+D +P+ + N L+ D K L G CP + +
Sbjct: 167 VYRDMKRD----GFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVI 222
Query: 138 EMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTF 197
M ++ G V++ Q+ E + + +N + K R + G V E+
Sbjct: 223 SSMCEV-GMVKEGRQLAERFEPVVSVYNALINGLCK-ERDYKGG------VELMSEMVEK 274
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHG-WCKINRVDE 255
G+ N + + L++ L G++ELA S+ + LK PN HT + + G + + D
Sbjct: 275 GISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDA 334
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
Q ++G G P V++Y+T++Q +C N K + M+ GC PN+ TY ++++
Sbjct: 335 LDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLIN 394
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
K G E A+ I KM G P+ + ++ L R S+ +EA + ++ EN A
Sbjct: 395 GFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKEN-CA 453
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS 435
P TFN I G + A V +M + C PN+ T++ LL K + +E
Sbjct: 454 PSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYG 513
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRL-ILD 494
L + + +TY ++HG C A A L +M+ + +P T + IL
Sbjct: 514 --LTREIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILA 571
Query: 495 EVKQKHMYDAAEKIEAV 511
KQ A + ++ V
Sbjct: 572 YCKQGKAERAVQMLDLV 588
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 179/354 (50%), Gaps = 10/354 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL- 194
Y +++ L Q++ +LL +M K G ++T++ +++ G DA+ ++++
Sbjct: 283 YSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMI 342
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRV 253
FGL+ N N L+ C G ++ A SVFL ++ PN T+ I+G+ K +
Sbjct: 343 RGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSL 402
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
+ A + +M GC P V+ Y++++++ CR F + L++ M + C P+V T+
Sbjct: 403 EGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAF 462
Query: 314 MSYLAKSGDFEEAIRITEKM-KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN 372
+ L +G + A ++ +M + P+ +N L+ L +A+R++EA Y E+
Sbjct: 463 IKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEA-YGLTREIFMR 521
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
GV TST+NT++ + G A ++ +M + P+ T + ++ + K GK +
Sbjct: 522 GVEWSTSTYNTLLHGSCNAGLPGIALQLVGKM-MVNGKSPDEITMNMIILAYCKQGKAER 580
Query: 433 CLSQLLDDMVN--KHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
+ L D+V+ + D+ +YT VI GLCR+N E +LF+ MI I P
Sbjct: 581 AVQML--DLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILFERMISERIIP 632
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 111/244 (45%), Gaps = 13/244 (5%)
Query: 273 ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEK 332
+++ +I+ V LL +M+ QG + + +V+S + G E A+ + +
Sbjct: 76 LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYR 135
Query: 333 MKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
+K G P + +N ++ TL +R+Q VY+ +M +G P+ T+N ++ +
Sbjct: 136 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYR-DMKRDGFEPNVFTYNVLLKALCKNN 194
Query: 393 HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC--LSQLLDDMVNKHHLSLD 450
+ A +L EM+ + C PN ++ ++ S + G E L++ + +V
Sbjct: 195 KVDGAKKLLVEMSN-KGCCPNAVSYTTVISSMCEVGMVKEGRQLAERFEPVV-------- 245
Query: 451 ITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEA 510
+ Y +I+GLC+ + L EM+ I+P + +++E+ + A + A
Sbjct: 246 -SVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLA 304
Query: 511 VMKK 514
M K
Sbjct: 305 QMLK 308
>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
Length = 1205
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 163/328 (49%), Gaps = 39/328 (11%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
+Y ++D L K + + + L EM+ KG + T + ++ F G+ ++A+ +E+
Sbjct: 201 MYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEM 260
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIP------------------- 234
+ N T N+L+D LCKEGKV+ A+SV + LK+C+
Sbjct: 261 VLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEV 320
Query: 235 ----------------PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTI 278
P+ HT+ I I+G+CK VDEA +EM P +++YS++
Sbjct: 321 KKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSL 380
Query: 279 IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
I C+ V++L+DEM +G P NV+TY++++ L K+G + AI + KMK G
Sbjct: 381 IDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGI 440
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
+P++ F L+ L + R+++A V+Q ++ G + T+N MI G E+A
Sbjct: 441 RPNTFTFTILLDGLCKGGRLKDAQEVFQ-DLLTKGYHLNVYTYNVMIDGHCKQGLLEEAL 499
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
+L +M C P+ TF ++ + FK
Sbjct: 500 TMLSKMED-NGCIPDAVTFEIIIIALFK 526
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 168/351 (47%), Gaps = 9/351 (2%)
Query: 166 VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSV 225
VTLNT+ K + GQ + A+ D+L G + N + L++ +CK G A +
Sbjct: 130 VTLNTLIKGL---CLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKL 186
Query: 226 FLELKSCIP-PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCR 284
++ + PN ++ I CK V EA EM G V++YST+I +C
Sbjct: 187 LQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCI 246
Query: 285 QYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRF 344
+ + LL+EM + PNV TY ++ L K G +EA + M KPD
Sbjct: 247 EGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVIT 306
Query: 345 FNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
++ L+ V++A +V+ M GV PD T+ +I F + ++A ++ +EM
Sbjct: 307 YSTLMDGYFLVYEVKKAQHVFNA-MSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEM 365
Query: 405 NKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRA 464
++ ++ P + T+ L+ K+G+ + L+D+M ++ + ++ TY+ +I GLC+
Sbjct: 366 HQ-KNMVPGIVTYSSLIDGLCKSGRI-PYVWDLIDEMHDRGQPA-NVITYSSLIDGLCKN 422
Query: 465 NKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEAVMKK 514
+ A LF +M I P T ++LD + K + DA E + ++ K
Sbjct: 423 GHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTK 473
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 175/372 (47%), Gaps = 16/372 (4%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEE----MSKGHIVTLNTIAKVMRRFSGAGQW 184
G++ + Y +++ + K+ LL++ ++K ++V +TI + ++
Sbjct: 159 GFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQ---LV 215
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIF 243
+A F E+ G+ + T + L+ C EGK++ A + E+ I PN +T+NI
Sbjct: 216 SEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNIL 275
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
+ CK +V EA+ + M P VI+YST++ Y Y K + + M G
Sbjct: 276 VDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGV 335
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
P+V TYT +++ K+ +EA+ + ++M P ++ LI L ++ R+ Y
Sbjct: 336 TPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIP---Y 392
Query: 364 VYQV--EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLL 421
V+ + EM + G + T++++I +GH ++A + +M K + +PN TF LL
Sbjct: 393 VWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKM-KDQGIRPNTFTFTILL 451
Query: 422 KSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHD 481
K G+ + D + +HL ++ TY ++I G C+ E A + +M +
Sbjct: 452 DGLCKGGRLKDAQEVFQDLLTKGYHL--NVYTYNVMIDGHCKQGLLEEALTMLSKMEDNG 509
Query: 482 ITPRYQTCRLIL 493
P T +I+
Sbjct: 510 CIPDAVTFEIII 521
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 155/324 (47%), Gaps = 7/324 (2%)
Query: 173 KVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKS 231
K++ F+ + AV L G++ + T+N+L++ C G++ SV + LK
Sbjct: 64 KILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKR 123
Query: 232 CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKV 291
PP+ T N I G C +V +A ++ G +SY T+I C+ +
Sbjct: 124 GYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAA 183
Query: 292 YELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYT 351
+LL ++ + PNVV Y+T++ L K EA + +M + G D ++ LIY
Sbjct: 184 IKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYG 243
Query: 352 LGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHC- 410
+++EA+ + EM + P+ T+N ++ G ++A VL M L+ C
Sbjct: 244 FCIEGKLKEAIGLLN-EMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVM--LKACV 300
Query: 411 KPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWA 470
KP+V T+ L+ F + + +Q + + ++ ++ D+ TYT++I+G C+ + A
Sbjct: 301 KPDVITYSTLMDGYFLVYEVKK--AQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEA 358
Query: 471 YLLFKEMIGHDITPRYQTCRLILD 494
LFKEM ++ P T ++D
Sbjct: 359 LNLFKEMHQKNMVPGIVTYSSLID 382
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 131/258 (50%), Gaps = 7/258 (2%)
Query: 227 LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQY 286
LELK I P+ T NI I+ +C + ++ + ++ G HP I+++T+I C +
Sbjct: 952 LELKG-IQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKG 1010
Query: 287 NFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFN 346
+K D++ AQG N V+Y T+++ + K GD AI++ K+ +KPD +N
Sbjct: 1011 QVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYN 1070
Query: 347 CLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNK 406
+I L + V +A ++ EM G++ D T+NT+I F G ++A +L +M
Sbjct: 1071 TIIDALCKHQLVSKAYGLF-FEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKM-V 1128
Query: 407 LEHCKPNVQTFHPLLKSCFKTGKT--DECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRA 464
L+ PNV+T++ L+ + K GK DE LS L + + + T+ ++I L
Sbjct: 1129 LKTINPNVRTYNILVDALCKEGKDLLDESLSML--SKMEDNGCKANAVTFEIIISALFEK 1186
Query: 465 NKCEWAYLLFKEMIGHDI 482
++ + L EMI +
Sbjct: 1187 DENDKVEKLLHEMIARGL 1204
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 3/207 (1%)
Query: 115 KSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAK 173
K A +F A S G Y ++++ K + +D+ L +EM + ++V + T +
Sbjct: 321 KKAQHVFN-AMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSS 379
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-C 232
++ +G+ DE+ G N T + L+D LCK G ++ A ++F ++K
Sbjct: 380 LIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQG 439
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
I PN TF I + G CK R+ +AQ Q++ G H V +Y+ +I +C+Q +
Sbjct: 440 IRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEAL 499
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAK 319
+L +M+ GC P+ VT+ ++ L K
Sbjct: 500 TMLSKMEDNGCIPDAVTFEIIIIALFK 526
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 4/210 (1%)
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEA 256
G +T T L++ LC +G+V A +L N ++ I+G CKI A
Sbjct: 991 GYHPDTITFTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAA 1050
Query: 257 QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSY 316
++++ G P V+ Y+TII + C+ SK Y L EM +G +VVTY T++
Sbjct: 1051 IKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYG 1110
Query: 317 LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR--VQEAVYVYQVEMPENGV 374
G +EAI + KM + P+ R +N L+ L + + + E++ + +M +NG
Sbjct: 1111 FCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLS-KMEDNGC 1169
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
+ TF +I+ ++K +L EM
Sbjct: 1170 KANAVTFEIIISALFEKDENDKVEKLLHEM 1199
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 119/265 (44%), Gaps = 4/265 (1%)
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
I VD+A M P +I ++ I+ S+ + ++S L ++ +G P+++T
Sbjct: 37 IQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLIT 96
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM 369
+++ G + K+ G PD+ N LI L +V++A++ + ++
Sbjct: 97 LNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHD-KL 155
Query: 370 PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
G + ++ T+I G A +L++++ KPNV + ++ + K
Sbjct: 156 LAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDG-RLTKPNVVMYSTIIDALCKYQL 214
Query: 430 TDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTC 489
E L +M K +S D+ TY+ +I+G C K + A L EM+ I P T
Sbjct: 215 VSEAYG-LFSEMTVKG-ISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTY 272
Query: 490 RLILDEVKQKHMYDAAEKIEAVMKK 514
+++D + ++ A+ + AVM K
Sbjct: 273 NILVDALCKEGKVKEAKSVLAVMLK 297
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/230 (19%), Positives = 92/230 (40%), Gaps = 39/230 (16%)
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
G P + + + +I +C + + +L ++ +G P+ +T+TT+++ L G +A
Sbjct: 956 GIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKA 1015
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
+ +K+ G + + + LI + + + A+ + + ++ PD +NT+I
Sbjct: 1016 LHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLR-KIDGRLTKPDVVMYNTIID 1074
Query: 387 MFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHH 446
H KA+ + EMN
Sbjct: 1075 ALCKHQLVSKAYGLFFEMNV--------------------------------------KG 1096
Query: 447 LSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV 496
+S D+ TY +I+G C K + A L +M+ I P +T +++D +
Sbjct: 1097 ISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDAL 1146
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 76/171 (44%), Gaps = 39/171 (22%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEMS-KG---HIVTLNTIAKVMRRFSGAGQWEDAVRTF 191
+Y ++D L K + + + L EM+ KG +VT NT+ + F G+ ++A+
Sbjct: 1068 MYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTL---IYGFCIVGKLKEAIGLL 1124
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKIN 251
+++ + N T N+L+D LCKEGK +
Sbjct: 1125 NKMVLKTINPNVRTYNILVDALCKEGK--------------------------------D 1152
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
+DE+ + +M+ +GC +++ II + + KV +LL EM A+G
Sbjct: 1153 LLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEMIARG 1203
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 56/133 (42%), Gaps = 3/133 (2%)
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
G+ PD T N +I F H G F +L ++ K + P+ TF L+ G+ ++
Sbjct: 956 GIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGY-HPDTITFTTLINGLCLKGQVNK 1014
Query: 433 CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLI 492
L D + L+ +Y +I+G+C+ A L +++ G P I
Sbjct: 1015 ALH--FHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTI 1072
Query: 493 LDEVKQKHMYDAA 505
+D + + + A
Sbjct: 1073 IDALCKHQLVSKA 1085
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 167/335 (49%), Gaps = 5/335 (1%)
Query: 151 DQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLL 210
D R + + G + T ++R G E + ++ G+ N T N L+
Sbjct: 190 DAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLI 249
Query: 211 DTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCH 269
D CK+ KV+ A ++ + + N ++N I+G C R+ E ++EM+G G
Sbjct: 250 DASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLV 309
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI 329
P ++Y+T++ +C++ N + LL EM +G PNVVTYTT+++ + K+G+ A+ I
Sbjct: 310 PDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEI 369
Query: 330 TEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFS 389
++M++ G +P+ R + LI + + EA V EM +G +P T+N ++ +
Sbjct: 370 FDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLS-EMIVSGFSPSVVTYNALVHGYC 428
Query: 390 HHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSL 449
G ++A +L M + P+V ++ ++ + + + Q+ ++MV K L
Sbjct: 429 FLGRVQEAVGILRGMVE-RGLPPDVVSYSTVIAGFCRERELGKAF-QMKEEMVEKGVLP- 485
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
D TY+ +I GLC K A+ LF+EM+ + P
Sbjct: 486 DTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPP 520
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 195/397 (49%), Gaps = 14/397 (3%)
Query: 127 CPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK----GHIVTLNTIAKVMRRFSGAG 182
C SS +++++V L ++ + + LL ++ +++ N + + R S +
Sbjct: 125 CSSPFSSSAVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSN 184
Query: 183 --QWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHT 239
++DA R F ++ G+ N T N+++ + +G +E ++ K I PN T
Sbjct: 185 HRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVT 244
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+N I CK +V EA ++ M G +ISY+++I C + S+V EL++EM+
Sbjct: 245 YNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMR 304
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
+G P+ VTY T+++ K G+ + + + +M G P+ + LI + +A +
Sbjct: 305 GKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLS 364
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
AV ++ +M G+ P+ T+ T+I F G +A+ VL EM + P+V T++
Sbjct: 365 RAVEIFD-QMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEM-IVSGFSPSVVTYNA 422
Query: 420 LLKS-CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
L+ CF G+ E + +L MV + L D+ +Y+ VI G CR + A+ + +EM+
Sbjct: 423 LVHGYCF-LGRVQEAVG-ILRGMVER-GLPPDVVSYSTVIAGFCRERELGKAFQMKEEMV 479
Query: 479 GHDITPRYQT-CRLILDEVKQKHMYDAAEKIEAVMKK 514
+ P T LI Q+ + +A + +M++
Sbjct: 480 EKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRR 516
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 183/383 (47%), Gaps = 14/383 (3%)
Query: 133 SSEIYEMMVDILGKVRQMDQ------MRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWED 186
S +Y V I G V Q D MR + +E ++VT NT+ + + ++
Sbjct: 204 SPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCK---KKKVKE 260
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIH 245
A+ + G+ N + N +++ LC +G++ + E++ + P+ T+N ++
Sbjct: 261 AMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVN 320
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G+CK + + + EM G G P V++Y+T+I C+ N S+ E+ D+M+ +G P
Sbjct: 321 GFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRP 380
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N TYTT++ + G EA ++ +M + G P +N L++ RVQEAV +
Sbjct: 381 NERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGIL 440
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
+ M E G+ PD +++T+I F KAF + EEM + + P+ T+ L++
Sbjct: 441 R-GMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVE-KGVLPDTVTYSSLIQGLC 498
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
K E L +M+ + L D TYT +I+ C + A L EM+ P
Sbjct: 499 LQQKLVEAF-DLFREMM-RRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPD 556
Query: 486 YQTCRLILDEVKQKHMYDAAEKI 508
T ++++ + +K A+++
Sbjct: 557 NVTYSVLINGLNKKARTKVAKRL 579
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 172/360 (47%), Gaps = 25/360 (6%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKG---HIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y +V+ K + Q LL EM KG ++VT T+ M + AG AV FD
Sbjct: 315 YNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCK---AGNLSRAVEIFD 371
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKIN 251
++ GL N T L+D C++G + A V E+ S P+ T+N +HG+C +
Sbjct: 372 QMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLG 431
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
RV EA ++ M G P V+SYST+I +CR+ K +++ +EM +G P+ VTY+
Sbjct: 432 RVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYS 491
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
+++ L EA + +M G PD + LI + +A+ ++ EM +
Sbjct: 492 SLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHD-EMVQ 550
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC----FKT 427
G PD T++ +I + + A +L ++ E P+ T++ L+++C FK+
Sbjct: 551 RGFLPDNVTYSVLINGLNKKARTKVAKRLLLKL-FYEESVPDDVTYNTLIENCSNNEFKS 609
Query: 428 GK---TDECLSQLLDD-------MVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
+ C+ L+++ M+ ++H + Y L+IHG R AY L+ E+
Sbjct: 610 VEGLVKGFCMKGLMNEADRVFKTMLQRNH-KPNAAIYNLMIHGHSRGGNVHKAYNLYMEL 668
>gi|299471526|emb|CBN80012.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 732
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 186/395 (47%), Gaps = 7/395 (1%)
Query: 113 DWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTI 171
DW+ AL + G + S+ Y + G RQ ++ LL M+ +G + T
Sbjct: 166 DWRKALDVLDRMQE-QGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVLTY 224
Query: 172 AKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS 231
+ + + +W++AV + G++ N + + K G+ E A + E+ +
Sbjct: 225 SSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPA 284
Query: 232 C-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSK 290
+ P+ T++ I K + + A + EM G +I+YS +I + + + +
Sbjct: 285 VGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEE 344
Query: 291 VYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIY 350
LL EMQ G P+V+TY++ +S AK G +EEA+ + +M + G P++ + +I
Sbjct: 345 AVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVIS 404
Query: 351 TLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHC 410
+ R +EA+ + Q EM +GV PD ++ I + E+A +L EM
Sbjct: 405 ACAKRGRWREAIDLLQ-EMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREM-PATGL 462
Query: 411 KPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWA 470
PNV +++ + +C KTG++ + +LL +M H L+ D+ TY+ VI + E A
Sbjct: 463 TPNVISYNSAIDACAKTGRSKIAV-ELLREM-PAHGLAPDVITYSAVIASCAMGRQWEEA 520
Query: 471 YLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
LF+EM ITP +C ++ Q ++ A
Sbjct: 521 LDLFREMQRQGITPDVVSCNTAINACAQGGWWEEA 555
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 152/304 (50%), Gaps = 5/304 (1%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTF 240
G W A+ D + G++ +++ + + + E A + + + PP+ T+
Sbjct: 165 GDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVLTY 224
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
+ I K++R EA ++ MKG G P VI YS I + + + +LL EM A
Sbjct: 225 SSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPA 284
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
G P+V+TY+TV+ AK G +E A R+ +M G + ++ +I + + +E
Sbjct: 285 VGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEE 344
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
AV + + EM ENGVAPD T+++ I+ + G E+A +L EM +E PN ++ +
Sbjct: 345 AVALLR-EMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREM-PMEGVTPNAISYGIV 402
Query: 421 LKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH 480
+ +C K G+ E + LL +M H + D+ Y+ I +A++ E A L +EM
Sbjct: 403 ISACAKRGRWREAI-DLLQEM-QAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPAT 460
Query: 481 DITP 484
+TP
Sbjct: 461 GLTP 464
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 173/361 (47%), Gaps = 8/361 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTI--AKVMRRFSGAGQWEDAVRTFDEL 194
Y + KV + + LL M KG V N I + + GQWE AV E+
Sbjct: 224 YSSAIAACAKVSRWKEAVGLLRSM-KGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEM 282
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRV 253
GL + T + ++D K G+ E A + +E+ + + N T++I I K +
Sbjct: 283 PAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQW 342
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
+EA ++EM+ +G P VI+YS+ I + ++ + + LL EM +G PN ++Y V
Sbjct: 343 EEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIV 402
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
+S AK G + EAI + ++M+ G PD ++ I +ASR ++A+++ + EMP G
Sbjct: 403 ISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLR-EMPATG 461
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
+ P+ ++N+ I + G + A +L EM P+V T+ ++ SC + +E
Sbjct: 462 LTPNVISYNSAIDACAKTGRSKIAVELLREM-PAHGLAPDVITYSAVIASCAMGRQWEEA 520
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
L L +M + ++ D+ + I+ + E A + EM + P + R +
Sbjct: 521 L-DLFREM-QRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAI 578
Query: 494 D 494
D
Sbjct: 579 D 579
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 170/389 (43%), Gaps = 41/389 (10%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVT-LNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +++ K Q ++ ALL EM + + + T + + + GQWE+AV E+
Sbjct: 329 YSIVIGACAKWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMP 388
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVD 254
G+ N + +++ K G+ A + E+++ +PP+ ++ I + +R +
Sbjct: 389 MEGVTPNAISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWE 448
Query: 255 EAQWTIQEMKG-----------------------------------HGCHPCVISYSTII 279
+A W ++EM HG P VI+YS +I
Sbjct: 449 QALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVI 508
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
S + + +L EMQ QG P+VV+ T ++ A+ G +EEA+ + +M +G
Sbjct: 509 ASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLV 568
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
PD+ + I + R +E + + + EM G+ PD ++ ++ S G ++A
Sbjct: 569 PDAISYRTAIDACAKGDRWKEIIDLLR-EMSTVGLTPDAISYRFAMSACSVDGLWKEALV 627
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIH 459
+L +M + P+V T++ + +C K G+ E + +L + L+ D+ ++ I
Sbjct: 628 LLRDMLAV-GLSPDVVTYNSAINACAKGGRWKE--ATVLLRQMPTFGLAPDVNSFNAAID 684
Query: 460 GLCRANKCEWAYLLFKEMIGHDITPRYQT 488
++ A + EM ++P T
Sbjct: 685 ACGNGDQWGTAVEVLFEMRALGVSPNEAT 713
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/224 (20%), Positives = 96/224 (42%), Gaps = 10/224 (4%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++ RQ ++ L EM + I V+ NT + + G WE+A+
Sbjct: 504 YSAVIASCAMGRQWEEALDLFREMQRQGITPDVVSCNT---AINACAQGGWWEEALDVLG 560
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKIN 251
E+ T GL + + +D K + + + E+ + + P+A ++ F C ++
Sbjct: 561 EMPTMGLVPDAISYRTAIDACAKGDRWKEIIDLLREMSTVGLTPDAISYR-FAMSACSVD 619
Query: 252 RV-DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
+ EA +++M G P V++Y++ I + + + + LL +M G P+V ++
Sbjct: 620 GLWKEALVLLRDMLAVGLSPDVVTYNSAINACAKGGRWKEATVLLRQMPTFGLAPDVNSF 679
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGR 354
+ + A+ + +M+ +G P+ + +Y R
Sbjct: 680 NAAIDACGNGDQWGTAVEVLFEMRALGVSPNEATYLTAMYACKR 723
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 84/194 (43%), Gaps = 21/194 (10%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGT 196
+E +D+LG +M M + + +S + ++ AK R W++ + E+ T
Sbjct: 552 WEEALDVLG---EMPTMGLVPDAIS--YRTAIDACAKGDR-------WKEIIDLLREMST 599
Query: 197 FGLEKNTETMNLLL-----DTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKIN 251
GL + + + D L KE V L + + L P+ T+N I+ K
Sbjct: 600 VGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGLS----PDVVTYNSAINACAKGG 655
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
R EA +++M G P V S++ I + + E+L EM+A G PN TY
Sbjct: 656 RWKEATVLLRQMPTFGLAPDVNSFNAAIDACGNGDQWGTAVEVLFEMRALGVSPNEATYL 715
Query: 312 TVMSYLAKSGDFEE 325
T M + G+ ++
Sbjct: 716 TAMYACKRCGEKDD 729
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 60/140 (42%), Gaps = 3/140 (2%)
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M E GV PD+ +++ I + E+A +L M P+V T+ + +C K
Sbjct: 177 MQEQGVKPDSQNYSSAIAACGNARQWERAVELLASM-AARGTPPDVLTYSSAIAACAKVS 235
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ E + LL M + ++ Y+ I + + E A L KEM + P T
Sbjct: 236 RWKEAVG-LLRSM-KGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPAVGLAPDVIT 293
Query: 489 CRLILDEVKQKHMYDAAEKI 508
++D ++ ++ A ++
Sbjct: 294 YSTVIDACAKRGQWEPAFRL 313
>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1084
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 126/486 (25%), Positives = 212/486 (43%), Gaps = 82/486 (16%)
Query: 98 PSHYLVNKLIHRF--KDDWKSALGIFRWAGSC---PGYEHSSEIYEMMV----------- 141
P+ + N LIH + D+ A +F+ C PGY +Y + +
Sbjct: 347 PNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYL----VYNIFIGSVCSNEEQPS 402
Query: 142 -DILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLE 200
DIL V +A E + G ++ ++ R GAG+++ A + E+ G
Sbjct: 403 SDILDLVE-----KAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFV 457
Query: 201 KNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWT 259
+ T + ++ LC KVE A S+F E+K + I P+ +T+ I I +CK + +A+
Sbjct: 458 PDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKW 517
Query: 260 IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK 319
EM GC P V++Y+ +I +Y + EL + M +GC PNVVTYT ++ K
Sbjct: 518 FDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCK 577
Query: 320 SGDFEEAIRITEKMK--IVGSKPDSRF--------------FNCLIYTLGRASRVQEA-- 361
+G E+A +I +M+ I S D F + L+ L +A+RV+EA
Sbjct: 578 AGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHE 637
Query: 362 ---------------VYVYQVE-----------------MPENGVAPDTSTFNTMITMFS 389
VY ++ M E G +P+ T+++ I
Sbjct: 638 LLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLF 697
Query: 390 HHGHHEKAFHVLEEMNKLEH-CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
+ VL +M LE+ C PNV + ++ K GKTDE +L + + +
Sbjct: 698 KDNRLDLVLKVLSKM--LENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLK--MEEKGCN 753
Query: 449 LDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
++ TYT +I G ++ K E LF++M P + T R++++ + D A K+
Sbjct: 754 PNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKL 813
Query: 509 EAVMKK 514
MK+
Sbjct: 814 LDEMKQ 819
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/401 (25%), Positives = 178/401 (44%), Gaps = 22/401 (5%)
Query: 120 IFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQ---MRALLEEMSKGHIVTLNTIAKVMR 176
F WAG GY H+ ++++ ++D+LG D ++ L+E H + + ++R
Sbjct: 125 FFLWAGRQIGYSHTPQVFDKLLDLLGCNVNADDRVPLKFLMEIKDDDHELLRRLLNFLVR 184
Query: 177 RFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPP 235
+ G W A+ L FG + + T N L+ + K++ A V E+ S
Sbjct: 185 KCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVM 244
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
+ +T + F + CK + EA I E + P + Y+ ++ C F + ++L
Sbjct: 245 DRYTLSCFAYSLCKGGKCREAFDLIDEAEDF--VPDTVFYNRMVSGLCEASLFEEAMDIL 302
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
M++ C PNVVTY ++S + G RI M G P+ FN LI+ ++
Sbjct: 303 HRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKS 362
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHH---------EKAFHVLEEMNK 406
A +++ +M + G P +N I + EKA+ + ++
Sbjct: 363 RDYSYAYKLFK-KMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGV 421
Query: 407 LEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANK 466
+ + K NV F L GK D+ +++ +M+ K + D +TY+ VI LC A+K
Sbjct: 422 VLN-KVNVSNFARCLCG---AGKFDQAF-KIICEMMGKGFVP-DDSTYSKVIGFLCDASK 475
Query: 467 CEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEK 507
E A+ LF+EM + I P T +++D + + A K
Sbjct: 476 VEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARK 516
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 109/447 (24%), Positives = 187/447 (41%), Gaps = 77/447 (17%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G S Y +++D K + Q R +EM KG + T ++ + A Q A
Sbjct: 490 GIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVA 549
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK----------------- 230
F+ + G + N T L+D CK G++E A ++ ++
Sbjct: 550 DELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHN 609
Query: 231 SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCR------ 284
+C PN T+ + G CK NRV EA + M HGC P I Y +I +C+
Sbjct: 610 NCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQD 669
Query: 285 -QYNFSK----------------------------VYELLDEMQAQGCPPNVVTYTTVMS 315
Q F+K V ++L +M C PNVV YT ++
Sbjct: 670 AQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVD 729
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
L K G +EA ++ KM+ G P+ + +I G++ ++++ + +++ +M G A
Sbjct: 730 GLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFR-DMCSKGCA 788
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS 435
P+ T+ +I +G ++A+ +L+EM QT+ P K K E S
Sbjct: 789 PNFITYRVLINHCCSNGLLDEAYKLLDEMK---------QTYWP--KHILSHRKIIEGFS 837
Query: 436 Q-------LLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI---GHDITPR 485
Q LLD++ + +D + Y ++I +A + E A L +E+ H ++ +
Sbjct: 838 QEFITSIGLLDELSENESVPVD-SLYRILIDNYIKAGRLEVALDLLEEISSSPSHAVSNK 896
Query: 486 YQTCRLILDEVKQKHMYDAAEKIEAVM 512
Y LI + + D A ++ A M
Sbjct: 897 YLYASLI-ENLSHASKVDKALELYASM 922
>gi|297739257|emb|CBI28908.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 184/414 (44%), Gaps = 43/414 (10%)
Query: 117 ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVM 175
A F WAG Y H E Y ++D+L D++R + E KG ++T+ ++
Sbjct: 138 AFRFFWWAGKQKNYIHKIECYVSLIDVLSLSSDFDRVRCIFGEFKEKGFLMTVFAANSLI 197
Query: 176 RRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC--I 233
R F G E+ + + + G+E + T N LL+ L +E A VF E+ C I
Sbjct: 198 RSFGALGMVEELLWVWRRMKESGIEPSLYTFNFLLNGLVNSMFIESAERVF-EVMECGKI 256
Query: 234 PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
P+ ++N I G+CK +A +M+ P I+Y T+IQ+ + NF
Sbjct: 257 GPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLH 316
Query: 294 LLDEMQ-----------------------------------AQGCPPNVVTYTTVMSYLA 318
L EM+ +GC NV YT ++
Sbjct: 317 LYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYG 376
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDT 378
K+G+ EAI + E+MK G +PD + ++ L ++ R+ EAV ++ +N VA +
Sbjct: 377 KNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEF-CKDNEVAVNA 435
Query: 379 STFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLL 438
++++I G ++A EEM + C + ++ L+ + K+GK +E L +L
Sbjct: 436 MFYSSLIDGLGKAGRVDEAEKFFEEMVE-RGCPQDSYCYNALIDALAKSGKMEEAL--VL 492
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLI 492
+ K + TYT++I GL + ++ E A L+ MI ITP + R +
Sbjct: 493 FKRMEKEGCDQTVYTYTILISGLFKEHRNEEALKLWDLMIDKGITPTTASFRAL 546
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 111/236 (47%), Gaps = 5/236 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G + + IY ++D GK +++ L E M +G T ++ +G+ ++A
Sbjct: 360 GCKANVAIYTALIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEA 419
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIH 245
V F+ + N + L+D L K G+V+ A F E+ + C P +++ +N I
Sbjct: 420 VEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGC-PQDSYCYNALID 478
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
K +++EA + M+ GC V +Y+ +I +++ + +L D M +G P
Sbjct: 479 ALAKSGKMEEALVLFKRMEKEGCDQTVYTYTILISGLFKEHRNEEALKLWDLMIDKGITP 538
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
++ + L SG A +I +++ +G P++ F + +I L +A R ++A
Sbjct: 539 TTASFRALSVGLCLSGKVARACKILDELAPMGVIPETAFED-MINVLCKAGRTEQA 593
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 110/238 (46%), Gaps = 7/238 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTI--AKVMRRFSGAGQWED 186
G+E Y ++V+ L K ++D+ E K + V +N + + ++ AG+ ++
Sbjct: 395 GFEPDDVTYGVIVNGLCKSGRLDEAVEYFE-FCKDNEVAVNAMFYSSLIDGLGKAGRVDE 453
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFI 244
A + F+E+ G +++ N L+D L K GK+E A +F +E + C +T+ I I
Sbjct: 454 AEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGC-DQTVYTYTILI 512
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
G K +R +EA M G P S+ + C ++ ++LDE+ G
Sbjct: 513 SGLFKEHRNEEALKLWDLMIDKGITPTTASFRALSVGLCLSGKVARACKILDELAPMGVI 572
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
P + +++ L K+G E+A ++ + + G + R LI L +A A+
Sbjct: 573 PET-AFEDMINVLCKAGRTEQACKLADGIVDRGREVPGRVRTILINALRKAGNADLAM 629
>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 827
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 113/410 (27%), Positives = 187/410 (45%), Gaps = 48/410 (11%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y +VD L K R MD+ +L +M + VT N I + +S +G W+++ + F
Sbjct: 270 YNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAI---IHGYSCSGHWKESAKMFR 326
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIP---------------- 234
++ + GL +T T + + +LCK G+ + A +F + K +P
Sbjct: 327 KMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEG 386
Query: 235 ------------------PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYS 276
N H NI I K +DEA EM+G G P V++YS
Sbjct: 387 RFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYS 446
Query: 277 TIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIV 336
T+I ++CR + E +M + G PN Y +++ GD +A +M
Sbjct: 447 TLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSK 506
Query: 337 G-SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHE 395
G +P+ FF+ +I++L RV +A V+ + + G P TFN++I + G E
Sbjct: 507 GLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVI-HIGDRPTIVTFNSLIDGYCLVGKME 565
Query: 396 KAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYT 455
KAF VL+ M + +P+V T + L+ K+GK D+ L L +M++K + TY
Sbjct: 566 KAFGVLDAMVSV-GIEPDVVTNNTLVSGYCKSGKIDDGL-ILFREMLHK-KVKPTTVTYN 622
Query: 456 LVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
+V+ GL RA + A +F EMI T +++L + + + D A
Sbjct: 623 IVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEA 672
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 169/366 (46%), Gaps = 9/366 (2%)
Query: 138 EMMVDILGKVRQMDQMRALLEEMSKGHIVTLN--TIAKVMRRFSGAGQWEDAVRTFDELG 195
+++ K MD+ + EM +G V N T + ++ F G+ DA+ F ++
Sbjct: 411 NILISAHAKRGMMDEAMLVFTEM-QGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMI 469
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRV 253
+ G+E NT + L+ C G + A+ E+ K PN F+ IH C RV
Sbjct: 470 SIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRV 529
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
+AQ + G P +++++++I YC K + +LD M + G P+VVT T+
Sbjct: 530 MDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTL 589
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
+S KSG ++ + + +M KP + +N ++ L RA R A ++ EM ++G
Sbjct: 590 VSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFH-EMIDSG 648
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
A D T+ ++ + ++A + ++ ++ CK ++ + ++ + +K + +E
Sbjct: 649 TAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMD-CKFDITILNTMINALYKVRRREE- 706
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
+ L ++ L +++TY ++I L + E A +F M P + I+
Sbjct: 707 -ANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDII 765
Query: 494 DEVKQK 499
+ QK
Sbjct: 766 RMLLQK 771
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/415 (22%), Positives = 173/415 (41%), Gaps = 77/415 (18%)
Query: 165 IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARS 224
+V+ NT V+ F G+ A F+E+ G+ + T N ++D LCK ++ A
Sbjct: 232 VVSFNT---VIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEF 288
Query: 225 VFLEL-KSCIPPNAHTFNIFIHGW-----------------------------------C 248
V ++ + P+ T+N IHG+ C
Sbjct: 289 VLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLC 348
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
K R +A+ Q M G P ++SYS ++ Y + F+ + L M +G N
Sbjct: 349 KHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCH 408
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
++S AK G +EA+ + +M+ G +P+ ++ LI R R+ +A+ + +
Sbjct: 409 CINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFS-Q 467
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM------------------------ 404
M G+ P+T+ ++++I F HG KA + EM
Sbjct: 468 MISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEG 527
Query: 405 ---------NKLEHC--KPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
N + H +P + TF+ L+ GK ++ +LD MV+ + D+ T
Sbjct: 528 RVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFG-VLDAMVSV-GIEPDVVT 585
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
++ G C++ K + +LF+EM+ + P T ++LD + + AA+K+
Sbjct: 586 NNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKM 640
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 140/306 (45%), Gaps = 8/306 (2%)
Query: 204 ETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEA-QWTIQ 261
T +L+D C+ + +L + L ++ + F+ C R DEA +
Sbjct: 125 RTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVLLH 184
Query: 262 EMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG--CPPNVVTYTTVMSYLAK 319
M C P ISY+T+I+S C + +++ M +G C P+VV++ TV+ K
Sbjct: 185 RMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFK 244
Query: 320 SGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTS 379
G+ +A + +M G PD +N ++ L +A + +A +V + +M + GV PD
Sbjct: 245 QGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLR-QMVDKGVEPDGV 303
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLD 439
T+N +I +S GH +++ + +M + P+ TF + S K G++ + ++
Sbjct: 304 TYNAIIHGYSCSGHWKESAKMFRKMTS-KGLIPDTVTFSSFMSSLCKHGRSKDA-EEIFQ 361
Query: 440 DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQK 499
M K H+ DI +Y++++HG + LF M I +++ ++
Sbjct: 362 YMTTKGHMP-DIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKR 420
Query: 500 HMYDAA 505
M D A
Sbjct: 421 GMMDEA 426
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 133/285 (46%), Gaps = 15/285 (5%)
Query: 207 NLLLDTLCKEGK----VELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQE 262
N ++ +LC + + +++ + + E C P+ +FN IHG+ K V +A E
Sbjct: 199 NTVIKSLCGDSRSQEALDMVQRMAKEGGRC-SPDVVSFNTVIHGFFKQGEVSKACNLFNE 257
Query: 263 MKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGD 322
M G P V +Y++I+ + C+ K +L +M +G P+ VTY ++ + SG
Sbjct: 258 MVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGH 317
Query: 323 FEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFN 382
++E+ ++ KM G PD+ F+ + +L + R ++A ++Q M G PD +++
Sbjct: 318 WKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQY-MTTKGHMPDIVSYS 376
Query: 383 TMITMFSHHGHH---EKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLD 439
++ ++ G FH + + + +C + L+ + K G DE + L+
Sbjct: 377 ILLHGYATEGRFADMNNLFHSMADKGIVSNC----HCINILISAHAKRGMMDEAM--LVF 430
Query: 440 DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
+ + ++ TY+ +I CR + A F +MI I P
Sbjct: 431 TEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEP 475
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 127/270 (47%), Gaps = 9/270 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKG---HIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
+ ++D V +M++ +L+ M S G +VT NT+ + + +G+ +D + F
Sbjct: 551 FNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTL---VSGYCKSGKIDDGLILFR 607
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKIN 251
E+ ++ T T N++LD L + G+ A+ +F E+ S + T+ I + G C+ +
Sbjct: 608 EMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRND 667
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
DEA ++ C + +T+I + + + +L + G PNV TY
Sbjct: 668 LTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYG 727
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
++ L K G EEA + M+ G P SR N +I L + + +A Y Y ++
Sbjct: 728 VMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGY-YMSKVDG 786
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVL 401
++ + ST + ++++FS G H + L
Sbjct: 787 TIISLEASTTSLLMSLFSSKGKHREQIKFL 816
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 97/250 (38%), Gaps = 15/250 (6%)
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEE---- 325
P V + I + + + L DE+ QG P + + ++ LA++ D
Sbjct: 40 PQVAFVAAIARVRAGTFCTDDAHHLFDELLRQGTPVHNRSLNDFLAALARAPDSVSCSNG 99
Query: 326 -AIRITEKMKIVGSKPDSRFFNCLIYTLG-------RASRVQEAVYVYQVEMPENGVAPD 377
A+ + +I + R + T G RA R + + + G+
Sbjct: 100 PALVLALFNRICREEAGPRVAPLTVRTYGILMDCCCRARR-PDLGPAFVARLLRAGLKTG 158
Query: 378 TSTFNTMITMFSHHGHHEKAFHVL-EEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQ 436
T T + H ++A VL M++L C P+ +++ ++KS ++ E L
Sbjct: 159 TIQATTFLKCLCHAKRTDEAVDVLLHRMSELS-CVPDAISYNTVIKSLCGDSRSQEALDM 217
Query: 437 LLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV 496
+ S D+ ++ VIHG + + A LF EM+ + P T I+D +
Sbjct: 218 VQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDAL 277
Query: 497 KQKHMYDAAE 506
+ D AE
Sbjct: 278 CKARAMDKAE 287
>gi|195655361|gb|ACG47148.1| ATP binding protein [Zea mays]
Length = 551
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 114/432 (26%), Positives = 192/432 (44%), Gaps = 31/432 (7%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILG----KVRQMDQMRALL 157
LV ++HR + K A F WA GY H Y ++DIL K RQ + +L
Sbjct: 110 LVADVLHRLLYEEKLAFRFFAWASQQDGYSHEPTTYNDIIDILSGTRYKSRQFGVLCNVL 169
Query: 158 EEMSK--GHIVTLNTIAKVMRRFSG---------AGQWEDAVRTFDELGTFGLEKNTETM 206
+ M + V + + +++R ++ A + +RT E T+ +
Sbjct: 170 DHMKRHGSRSVPVEGLLEILRAYTEKHLTHMRKLAKKRRVRMRTPPE---------TDAL 220
Query: 207 NLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
N+LLD CK G V+ A +VF +K + NA T++ GWC+ +A ++EM
Sbjct: 221 NVLLDAFCKCGMVKEAEAVFGRVKRKLLGNAETYSTLFFGWCRARDPKKAMKVLEEMIQM 280
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG---CPPNVVTYTTVMSYLAKSGDF 323
P +Y I+S+C S+ EL + M+ +G P TY+ ++ LAK+
Sbjct: 281 KHTPESFTYVAAIESFCSAGLVSEARELFEFMRTEGLTVSSPTAKTYSIMIVALAKADRM 340
Query: 324 EEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNT 383
EE + M+ G PD + LI + R+ +A Y EM G PD T+N
Sbjct: 341 EECFELLSDMRTCGCMPDVTTYKDLIEGMCLVGRL-DAAYRVLDEMGRAGFPPDIVTYNC 399
Query: 384 MITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVN 443
+ + + + A + E M + HC+P+V T++ L+ F+ G+ L L+ ++
Sbjct: 400 FLNVLCSLRNADDALELCERMIE-AHCEPSVHTYNMLMMMFFEMGEAHRALDIWLE--MD 456
Query: 444 KHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYD 503
K I TY ++I+GL + E+A L E+I D+ Y+ I+ +
Sbjct: 457 KRGCQRAIDTYEIMIYGLFDCGETEYATALLDEVINRDMKLSYKKFDAIMLRLSAVGNLG 516
Query: 504 AAEKIEAVMKKL 515
A ++ M+K
Sbjct: 517 AIHRLSEHMRKF 528
>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
Length = 1274
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 122/464 (26%), Positives = 206/464 (44%), Gaps = 52/464 (11%)
Query: 65 PDIDVIISKVHVGSSEDEVFQS--LKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGI 120
PD+ ++V +E +S L Q + P+ N ++H + K +K+A+ +
Sbjct: 191 PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIEL 250
Query: 121 FRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI----VTLNTIAKVMR 176
S G + Y M++ L + ++ + LL +M K I VT NT+ +
Sbjct: 251 LDHMKS-KGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTL---IN 306
Query: 177 RFSGAGQWEDAVRTFDELGTFGLEKNTETMN----------------------------- 207
FS G+ A + +E+ +FGL N T N
Sbjct: 307 GFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTP 366
Query: 208 ------LLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTI 260
+LLD LCK + +LAR ++ +K + + T+ I G CK +DEA +
Sbjct: 367 SEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLL 426
Query: 261 QEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKS 320
EM G P +++YS +I +C+ F E++ + G PN + Y+T++ +
Sbjct: 427 NEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRM 486
Query: 321 GDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTST 380
G +EAIRI E M + G D FN L+ +L +A +V EA + M +G+ P+T +
Sbjct: 487 GCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRC-MTSDGILPNTVS 545
Query: 381 FNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDD 440
F+ +I + + G KAF V +EM K+ H P T+ LLK K G E ++
Sbjct: 546 FDCLINGYGNSGEGLKAFSVFDEMTKVGH-HPTFFTYGSLLKGLCKGGHLRE--AEKFLK 602
Query: 441 MVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
++ ++D Y ++ +C++ A LF EM+ I P
Sbjct: 603 SLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILP 646
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/415 (24%), Positives = 192/415 (46%), Gaps = 26/415 (6%)
Query: 115 KSALGIFRWAGSCPGYE--HSSEIYEMMVDILGKVRQMDQMRALLEEMSK---------G 163
K AL +W PG E H ++ + IL + R D R +L+E+S G
Sbjct: 51 KLALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVFG 110
Query: 164 HIVTLNTIAK--------VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK 215
++T + ++R + G +D++ F +G +G + T N +L ++ K
Sbjct: 111 ALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVK 170
Query: 216 EGKVELARSVFLE--LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI 273
G+ +++ FL+ LK I P+ TFNI I+ C +++ + +Q+M+ G P ++
Sbjct: 171 SGE-DVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIV 229
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
+Y+T++ YC++ F ELLD M+++G +V TY ++ L +S + + M
Sbjct: 230 TYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM 289
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
+ P+ +N LI +V A + EM G++P+ TFN +I G+
Sbjct: 290 RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLN-EMLSFGLSPNHVTFNALIDGHISEGN 348
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
++A + M + + P+ ++ LL K + D L++ + ++ + + T
Sbjct: 349 FKEALKMFYMM-EAKGLTPSEVSYGVLLDGLCKNAEFD--LARGFYMRMKRNGVCVGRIT 405
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
YT +I GLC+ + A +L EM I P T +++ + + A++I
Sbjct: 406 YTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEI 460
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 96/410 (23%), Positives = 178/410 (43%), Gaps = 42/410 (10%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHI--------VTLNTIAKVMRRFSGA------- 181
Y M+D L K +D+ LL EMSK I +N KV RF A
Sbjct: 406 YTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKV-GRFKTAKEIVCRI 464
Query: 182 ----------------------GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV 219
G ++A+R ++ + G ++ T N+L+ +LCK GKV
Sbjct: 465 YRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKV 524
Query: 220 ELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTI 278
A + S I PN +F+ I+G+ +A EM G HP +Y ++
Sbjct: 525 AEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSL 584
Query: 279 IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
++ C+ + + + L + A + V Y T+++ + KSG+ +A+ + +M
Sbjct: 585 LKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSI 644
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
PDS + LI L R + A+ + V P+ + + G +
Sbjct: 645 LPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGI 704
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
+ E+M+ L H P++ T + ++ + GK ++ + LL +M N++ ++TTY +++
Sbjct: 705 YFREQMDNLGH-TPDIVTTNAMIDGYSRMGKIEKT-NDLLPEMGNQNG-GPNLTTYNILL 761
Query: 459 HGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
HG + ++LL++ +I + I P TC ++ + + +M + KI
Sbjct: 762 HGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKI 811
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 106/471 (22%), Positives = 195/471 (41%), Gaps = 47/471 (9%)
Query: 83 VFQSLKQDHVCNAIQPSHYLVNKL--IHRFKDDWKSALGIFRWAGSCPGYEHSSEIYE-- 138
+ + +D + I L+N + RFK + I+R S G +S+ IY
Sbjct: 425 LLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCC 484
Query: 139 MMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
M + +R + M +LE ++ H T N + + + + E+ +R + + G
Sbjct: 485 RMGCLKEAIRIYEAM--ILEGHTRDHF-TFNVLVTSLCKAGKVAEAEEFMRC---MTSDG 538
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQ 257
+ NT + + L++ G+ A SVF E+ K P T+ + G CK + EA+
Sbjct: 539 ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 598
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
++ + + Y+T++ + C+ N +K L EM + P+ TYT+++S L
Sbjct: 599 KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 658
Query: 318 AKSGDFEEAIRITEKMKIVGSK-PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
+ G AI ++ + G+ P+ + C + + +A + + +Y ++ +M G P
Sbjct: 659 CRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIY-FREQMDNLGHTP 717
Query: 377 DTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC--- 433
D T N MI +S G EK +L EM ++ PN+ T++ LL K
Sbjct: 718 DIVTTNAMIDGYSRMGKIEKTNDLLPEMGN-QNGGPNLTTYNILLHGYSKRKDVSTSFLL 776
Query: 434 -----LSQLLDDMVNKHHLSLDIT-------------------------TYTLVIHGLCR 463
L+ +L D + H L L I T+ ++I C
Sbjct: 777 YRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCA 836
Query: 464 ANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
+ WA+ L K M I+ TC ++ + + H + + + M K
Sbjct: 837 NGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSK 887
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 149/364 (40%), Gaps = 39/364 (10%)
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHT 239
AGQW+ + +++ G + T N ++D + GK+E + E+ + PN T
Sbjct: 697 AGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTT 756
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+NI +HG+ K V + + + +G P ++ +++ C ++L
Sbjct: 757 YNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFI 816
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
+G + T+ ++S +G+ A + + M +G D + ++ L R R Q
Sbjct: 817 CRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQ 876
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQ---- 415
E+ V EM + G++P++ + +I G + AF V EEM + C PNV
Sbjct: 877 ESRMVLH-EMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAM 935
Query: 416 ------------------------------TFHPLLKSCFKTGKTDECLSQLLDDMVNKH 445
+F L+ C K G E L L +++
Sbjct: 936 VRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALE--LRVVMSNC 993
Query: 446 HLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCR-LILDEVKQKHMYDA 504
L LD+ +Y ++I GLC A+ L++EM G T + LI + ++ +
Sbjct: 994 GLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSG 1053
Query: 505 AEKI 508
A+ I
Sbjct: 1054 ADII 1057
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 84/386 (21%), Positives = 164/386 (42%), Gaps = 42/386 (10%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
++ +++ G + + ++ +EM+K GH T T +++ G +A + L
Sbjct: 546 FDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH 605
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINR-- 252
+T N LL +CK G + A S+F E+ + I P+++T+ I G C+ +
Sbjct: 606 AVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTV 665
Query: 253 -------------------------VD----EAQWTI-----QEMKGHGCHPCVISYSTI 278
VD QW ++M G P +++ + +
Sbjct: 666 IAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAM 725
Query: 279 IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
I Y R K +LL EM Q PN+ TY ++ +K D + + + + G
Sbjct: 726 IDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGI 785
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
PD + L+ + ++ ++ + + + + GV D TFN +I+ +G AF
Sbjct: 786 LPDKLTCHSLVLGICESNMLEIGLKILKAFICR-GVEVDRYTFNMLISKCCANGEINWAF 844
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
+++ M L + T ++ + + E S+++ ++K +S + Y +I
Sbjct: 845 DLVKVMTSL-GISLDKDTCDAMVSVLNRNHRFQE--SRMVLHEMSKQGISPESRKYIGLI 901
Query: 459 HGLCRANKCEWAYLLFKEMIGHDITP 484
+GLCR + A+++ +EMI H I P
Sbjct: 902 NGLCRVGDIKTAFVVKEEMIAHKICP 927
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 124/279 (44%), Gaps = 4/279 (1%)
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
N ++I I + + + ++ + M +G +P V + + I+ S + V+ L
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 181
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
EM + P+V T+ +++ L G FE++ + +KM+ G P +N +++ +
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 241
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQ 415
R + A+ + M GV D T+N +I K + +L +M K PN
Sbjct: 242 GRFKAAIELLD-HMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRK-RMIHPNEV 299
Query: 416 TFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFK 475
T++ L+ GK SQLL++M++ LS + T+ +I G + A +F
Sbjct: 300 TYNTLINGFSNEGKV-LIASQLLNEMLS-FGLSPNHVTFNALIDGHISEGNFKEALKMFY 357
Query: 476 EMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
M +TP + ++LD + + +D A MK+
Sbjct: 358 MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKR 396
>gi|226495005|ref|NP_001148062.1| GTP binding protein [Zea mays]
gi|195615570|gb|ACG29615.1| GTP binding protein [Zea mays]
Length = 535
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 195/412 (47%), Gaps = 15/412 (3%)
Query: 106 LIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGH- 164
++ + + +W+ AL F WA + PGY H S Y M+DILG+++++ MR L +E+ +
Sbjct: 116 VLQKQRSNWQVALAFFNWAATLPGYAHGSRAYTEMLDILGRMKKVRHMRQLFDEIPEERR 175
Query: 165 --IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELA 222
+VT A ++ R++GA + ++A+ F +G E + +LL +LC+ VE A
Sbjct: 176 QVVVTNKMFAVLLNRYAGAHKVQEAIEVFYLRKDYGFELDLVGFQILLMSLCRYKHVEEA 235
Query: 223 RSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSY 282
++F E K P ++NI ++GWC + +AQ ++ + ++ T I +
Sbjct: 236 EALFREKKDEFPHVTKSWNIILNGWCVKGSLRDAQRIWNDIIASKVERDLFTFGTFINAL 295
Query: 283 CRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDS 342
+ S +L +M +G P+V ++ L EA+ I +M + D
Sbjct: 296 AKNGRISAAVKLFKQMWEKGINPDVAICNCIIDQLCFKKKIPEALEIFGEMNDRLCQADV 355
Query: 343 RFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLE 402
+N LI + + R+ E VY +M G +P+ T++ ++ EK V+
Sbjct: 356 ATYNTLIKYMCKIKRM-EKVYELLDDMEAKGCSPNNRTYSYILKT------TEKPKDVIA 408
Query: 403 EMNKLEH--CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHG 460
M ++E CK + ++ L+ + + K ++ + Q+ D+M + D ++T+++HG
Sbjct: 409 LMQRMERSGCKLDSDMYN-LILNLYIKWKYEKGMQQIWDEM-ERRGSGPDQRSFTIMVHG 466
Query: 461 LCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
L K + A + M + P +T +++ + K AAE A M
Sbjct: 467 LHSQGKLDEALQYYTTMKSRGMIPEPRT-KILAKAMHMKKDGSAAEDDSASM 517
>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1136
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 122/464 (26%), Positives = 206/464 (44%), Gaps = 52/464 (11%)
Query: 65 PDIDVIISKVHVGSSEDEVFQS--LKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGI 120
PD+ ++V +E +S L Q + P+ N ++H + K +K+A+ +
Sbjct: 231 PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIEL 290
Query: 121 FRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI----VTLNTIAKVMR 176
S G + Y M++ L + ++ + LL +M K I VT NT+ +
Sbjct: 291 LDHMKS-KGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTL---IN 346
Query: 177 RFSGAGQWEDAVRTFDELGTFGLEKNTETMN----------------------------- 207
FS G+ A + +E+ +FGL N T N
Sbjct: 347 GFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTP 406
Query: 208 ------LLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTI 260
+LLD LCK + +LAR ++ +K + + T+ I G CK +DEA +
Sbjct: 407 SEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLL 466
Query: 261 QEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKS 320
EM G P +++YS +I +C+ F E++ + G PN + Y+T++ +
Sbjct: 467 NEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRM 526
Query: 321 GDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTST 380
G +EAIRI E M + G D FN L+ +L +A +V EA + M +G+ P+T +
Sbjct: 527 GCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRC-MTSDGILPNTVS 585
Query: 381 FNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDD 440
F+ +I + + G KAF V +EM K+ H P T+ LLK K G E ++
Sbjct: 586 FDCLINGYGNSGEGLKAFSVFDEMTKVGH-HPTFFTYGSLLKGLCKGGHLRE--AEKFLK 642
Query: 441 MVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
++ ++D Y ++ +C++ A LF EM+ I P
Sbjct: 643 SLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILP 686
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/415 (24%), Positives = 192/415 (46%), Gaps = 26/415 (6%)
Query: 115 KSALGIFRWAGSCPGYE--HSSEIYEMMVDILGKVRQMDQMRALLEEMSK---------G 163
K AL +W PG E H ++ + IL + R D R +L+E+S G
Sbjct: 91 KLALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVFG 150
Query: 164 HIVTLNTIAK--------VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK 215
++T + ++R + G +D++ F +G +G + T N +L ++ K
Sbjct: 151 ALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVK 210
Query: 216 EGKVELARSVFLE--LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI 273
G+ +++ FL+ LK I P+ TFNI I+ C +++ + +Q+M+ G P ++
Sbjct: 211 SGE-DVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIV 269
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
+Y+T++ YC++ F ELLD M+++G +V TY ++ L +S + + M
Sbjct: 270 TYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM 329
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
+ P+ +N LI +V A + EM G++P+ TFN +I G+
Sbjct: 330 RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLN-EMLSFGLSPNHVTFNALIDGHISEGN 388
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
++A + M + + P+ ++ LL K + D L++ + ++ + + T
Sbjct: 389 FKEALKMFYMM-EAKGLTPSEVSYGVLLDGLCKNAEFD--LARGFYMRMKRNGVCVGRIT 445
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
YT +I GLC+ + A +L EM I P T +++ + + A++I
Sbjct: 446 YTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEI 500
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 96/410 (23%), Positives = 178/410 (43%), Gaps = 42/410 (10%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHI--------VTLNTIAKVMRRFSGA------- 181
Y M+D L K +D+ LL EMSK I +N KV RF A
Sbjct: 446 YTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKV-GRFKTAKEIVCRI 504
Query: 182 ----------------------GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV 219
G ++A+R ++ + G ++ T N+L+ +LCK GKV
Sbjct: 505 YRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKV 564
Query: 220 ELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTI 278
A + S I PN +F+ I+G+ +A EM G HP +Y ++
Sbjct: 565 AEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSL 624
Query: 279 IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
++ C+ + + + L + A + V Y T+++ + KSG+ +A+ + +M
Sbjct: 625 LKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSI 684
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
PDS + LI L R + A+ + V P+ + + G +
Sbjct: 685 LPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGI 744
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
+ E+M+ L H P++ T + ++ + GK ++ + LL +M N++ ++TTY +++
Sbjct: 745 YFREQMDNLGH-TPDIVTTNAMIDGYSRMGKIEKT-NDLLPEMGNQNG-GPNLTTYNILL 801
Query: 459 HGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
HG + ++LL++ +I + I P TC ++ + + +M + KI
Sbjct: 802 HGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKI 851
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 106/471 (22%), Positives = 195/471 (41%), Gaps = 47/471 (9%)
Query: 83 VFQSLKQDHVCNAIQPSHYLVNKL--IHRFKDDWKSALGIFRWAGSCPGYEHSSEIYE-- 138
+ + +D + I L+N + RFK + I+R S G +S+ IY
Sbjct: 465 LLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCC 524
Query: 139 MMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
M + +R + M +LE ++ H T N + + + + E+ +R + + G
Sbjct: 525 RMGCLKEAIRIYEAM--ILEGHTRDHF-TFNVLVTSLCKAGKVAEAEEFMRC---MTSDG 578
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQ 257
+ NT + + L++ G+ A SVF E+ K P T+ + G CK + EA+
Sbjct: 579 ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 638
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
++ + + Y+T++ + C+ N +K L EM + P+ TYT+++S L
Sbjct: 639 KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 698
Query: 318 AKSGDFEEAIRITEKMKIVGSK-PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
+ G AI ++ + G+ P+ + C + + +A + + +Y ++ +M G P
Sbjct: 699 CRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIY-FREQMDNLGHTP 757
Query: 377 DTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC--- 433
D T N MI +S G EK +L EM ++ PN+ T++ LL K
Sbjct: 758 DIVTTNAMIDGYSRMGKIEKTNDLLPEMGN-QNGGPNLTTYNILLHGYSKRKDVSTSFLL 816
Query: 434 -----LSQLLDDMVNKHHLSLDIT-------------------------TYTLVIHGLCR 463
L+ +L D + H L L I T+ ++I C
Sbjct: 817 YRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCA 876
Query: 464 ANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
+ WA+ L K M I+ TC ++ + + H + + + M K
Sbjct: 877 NGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSK 927
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 149/364 (40%), Gaps = 39/364 (10%)
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHT 239
AGQW+ + +++ G + T N ++D + GK+E + E+ + PN T
Sbjct: 737 AGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTT 796
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+NI +HG+ K V + + + +G P ++ +++ C ++L
Sbjct: 797 YNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFI 856
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
+G + T+ ++S +G+ A + + M +G D + ++ L R R Q
Sbjct: 857 CRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQ 916
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQ---- 415
E+ V EM + G++P++ + +I G + AF V EEM + C PNV
Sbjct: 917 ESRMVLH-EMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAM 975
Query: 416 ------------------------------TFHPLLKSCFKTGKTDECLSQLLDDMVNKH 445
+F L+ C K G E L L +++
Sbjct: 976 VRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALE--LRVVMSNC 1033
Query: 446 HLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCR-LILDEVKQKHMYDA 504
L LD+ +Y ++I GLC A+ L++EM G T + LI + ++ +
Sbjct: 1034 GLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSG 1093
Query: 505 AEKI 508
A+ I
Sbjct: 1094 ADII 1097
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 84/386 (21%), Positives = 164/386 (42%), Gaps = 42/386 (10%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
++ +++ G + + ++ +EM+K GH T T +++ G +A + L
Sbjct: 586 FDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH 645
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINR-- 252
+T N LL +CK G + A S+F E+ + I P+++T+ I G C+ +
Sbjct: 646 AVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTV 705
Query: 253 -------------------------VD----EAQWTI-----QEMKGHGCHPCVISYSTI 278
VD QW ++M G P +++ + +
Sbjct: 706 IAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAM 765
Query: 279 IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
I Y R K +LL EM Q PN+ TY ++ +K D + + + + G
Sbjct: 766 IDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGI 825
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
PD + L+ + ++ ++ + + + + GV D TFN +I+ +G AF
Sbjct: 826 LPDKLTCHSLVLGICESNMLEIGLKILKAFICR-GVEVDRYTFNMLISKCCANGEINWAF 884
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
+++ M L + T ++ + + E S+++ ++K +S + Y +I
Sbjct: 885 DLVKVMTSL-GISLDKDTCDAMVSVLNRNHRFQE--SRMVLHEMSKQGISPESRKYIGLI 941
Query: 459 HGLCRANKCEWAYLLFKEMIGHDITP 484
+GLCR + A+++ +EMI H I P
Sbjct: 942 NGLCRVGDIKTAFVVKEEMIAHKICP 967
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 124/279 (44%), Gaps = 4/279 (1%)
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
N ++I I + + + ++ + M +G +P V + + I+ S + V+ L
Sbjct: 162 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 221
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
EM + P+V T+ +++ L G FE++ + +KM+ G P +N +++ +
Sbjct: 222 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 281
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQ 415
R + A+ + M GV D T+N +I K + +L +M K PN
Sbjct: 282 GRFKAAIELLD-HMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRK-RMIHPNEV 339
Query: 416 TFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFK 475
T++ L+ GK SQLL++M++ LS + T+ +I G + A +F
Sbjct: 340 TYNTLINGFSNEGKV-LIASQLLNEMLS-FGLSPNHVTFNALIDGHISEGNFKEALKMFY 397
Query: 476 EMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
M +TP + ++LD + + +D A MK+
Sbjct: 398 MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKR 436
>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
Length = 797
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 182/382 (47%), Gaps = 6/382 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G + + Y ++D L K + +D+ + ++M KG +T ++ + G+W++
Sbjct: 233 GIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEV 292
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHG 246
VR +E+ GL+ + T LL+ LC G+ AR F + + I PN + I IHG
Sbjct: 293 VRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHG 352
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
+ + E + M +G P ++ I +Y ++ + + ++M+ QG P+
Sbjct: 353 YATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPD 412
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
VV + ++ L K G ++A+ +M G P+ FN L+Y L + ++A Y
Sbjct: 413 VVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFY- 471
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
EM G+ PD FNT++ G KA +++ M ++ +P+V ++ L+
Sbjct: 472 FEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERV-GTRPDVISYTTLIGGHCL 530
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
G+ DE L D++ L D TY ++HG CRA + + AY +F+EM+ + ITP
Sbjct: 531 VGRIDEAAKSL--DVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGV 588
Query: 487 QTCRLILDEVKQKHMYDAAEKI 508
T IL + + A+++
Sbjct: 589 VTYSTILHGLFTTRRFSEAKEL 610
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 190/391 (48%), Gaps = 12/391 (3%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVM-RRFSGAGQWEDA 187
G + + IY +++ + +M LL M + + + I ++ ++ ++A
Sbjct: 338 GIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEA 397
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHG 246
+ F+++ GL + L+D LCK G+V+ A F ++ + PN FN ++G
Sbjct: 398 MHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYG 457
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C +++ ++A+ EM G P V+ ++TI+ + C + K L+D M+ G P+
Sbjct: 458 LCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPD 517
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
V++YTT++ G +EA + + M VG KPD +N L++ RA R+ +A V++
Sbjct: 518 VISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFR 577
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEE--MNKLEHCKP-NVQTFHPLLKS 423
EM NG+ P T++T++ H + F +E +N + K N+ ++ +L
Sbjct: 578 -EMLRNGITPGVVTYSTIL----HGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNG 632
Query: 424 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
K DE +L + +K L+ITT+ ++I L ++ + E A LF + + +
Sbjct: 633 LSKNNCVDEAF-KLFQSLCSK-DFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLV 690
Query: 484 PRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
P T LI + + ++ + + + + M+K
Sbjct: 691 PDVFTYCLIAENLIEEGYLEEFDDLFSAMEK 721
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 155/315 (49%), Gaps = 5/315 (1%)
Query: 202 NTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTI 260
N + +++ EG+V+ A ++FLE+ I PN T+ I G CK VD A+
Sbjct: 202 NVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVF 261
Query: 261 QEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKS 320
Q+M G P +Y+ +I Y + +V +L+EM A G P+ TY ++++YL +
Sbjct: 262 QQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNN 321
Query: 321 GDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTST 380
G EA + M G KP+ + LI+ + E + + M ENG++PD
Sbjct: 322 GRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNL-MVENGLSPDHHI 380
Query: 381 FNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDD 440
FN + T ++ ++A H+ +M K + P+V F L+ + K G+ D+ + + +
Sbjct: 381 FNIIFTAYAKKAMIDEAMHIFNKM-KQQGLSPDVVNFGALIDALCKLGRVDDAVLKF-NQ 438
Query: 441 MVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKH 500
M+N+ ++ +I + +++GLC +K E A + EM+ I P IL + K
Sbjct: 439 MMNEG-VAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKG 497
Query: 501 MYDAAEKIEAVMKKL 515
A+++ +M+++
Sbjct: 498 QVMKAQRLIDLMERV 512
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 152/346 (43%), Gaps = 42/346 (12%)
Query: 178 FSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCI--PP 235
F G+ E TF + G N +N LL LC ++ A + ++ + P
Sbjct: 104 FCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAMDILIKRMPELGCTP 163
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEM---KGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
+ ++N + G+C R +EA + M +G C P V+SY+T+I + + K Y
Sbjct: 164 DVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAY 223
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
L EM +G PNVVTYTTV+ L K+ + A + ++M G KPD+ +NCLI+
Sbjct: 224 NLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGY 283
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
+ +E V + + EM +G+ PD T+ +++ ++G +A + M + + KP
Sbjct: 284 LSIGKWKEVVRMLE-EMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIR-KGIKP 341
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK-----HH--------------------- 446
NV + L+ G E + LL+ MV HH
Sbjct: 342 NVAIYGILIHGYATKGALSE-MHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHI 400
Query: 447 --------LSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
LS D+ + +I LC+ + + A L F +M+ + P
Sbjct: 401 FNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAP 446
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 91/186 (48%), Gaps = 4/186 (2%)
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
P++ TY+ ++ + G E + G + ++ N L+ L A R++EA+ +
Sbjct: 92 PDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAMDI 151
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM--NKLEHCKPNVQTFHPLLK 422
MPE G PD ++NT++ F + E+A +L M ++ C PNV ++ ++
Sbjct: 152 LIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVIN 211
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
F G+ D+ + L+ M + ++ TYT VI GLC+A + A +F++MI +
Sbjct: 212 GFFTEGQVDKAYNLFLEMM--DRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGV 269
Query: 483 TPRYQT 488
P T
Sbjct: 270 KPDNDT 275
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 88/398 (22%), Positives = 163/398 (40%), Gaps = 58/398 (14%)
Query: 61 SPRLPDIDVIISKV-HVGSSEDEVFQSLKQDHVCN-AIQPSHYLVNKLIHRF--KDDWKS 116
SP + + +I + +G +D V LK + + N + P+ ++ N L++ D W+
Sbjct: 410 SPDVVNFGALIDALCKLGRVDDAV---LKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEK 466
Query: 117 ALGIFRWAGSCPGYEHSSEIYEMMVDIL---GKVRQMDQMRALLEEM-SKGHIVTLNTIA 172
A F + G + ++ L G+V + ++ L+E + ++ +++ T+
Sbjct: 467 AKE-FYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTL- 524
Query: 173 KVMRRFSG---AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE- 228
G G+ ++A ++ D + + GL+ + T N LL C+ G+++ A VF E
Sbjct: 525 -----IGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREM 579
Query: 229 LKSCIPPNAHTFNIFIHGWCKINRVDEA------------QWTIQE----MKGHGCHPCV 272
L++ I P T++ +HG R EA QW I + G + CV
Sbjct: 580 LRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCV 639
Query: 273 ISYSTIIQSYCRQ--------YNF-----------SKVYELLDEMQAQGCPPNVVTYTTV 313
+ QS C + +N L + + G P+V TY +
Sbjct: 640 DEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLI 699
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
L + G EE + M+ G+ P+SR N L+ L + A Y ++ E
Sbjct: 700 AENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRA-GAYLSKLDEKN 758
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCK 411
+ + ST +I++ S +H A + E+ L K
Sbjct: 759 FSLEASTTAMLISLLSRDEYHHHATSLPEKYRVLNEAK 796
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 111/425 (26%), Positives = 197/425 (46%), Gaps = 29/425 (6%)
Query: 58 CVDSPRLPDIDVIISK--VHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWK 115
C R PD+ +++ + G ++ S +C A + VN L+HR +
Sbjct: 166 CCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYA-NRTEEAVNVLLHRMSE--- 221
Query: 116 SALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIA--K 173
G P S I + + D R +D + + +E G + N +A
Sbjct: 222 --------LGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKE---GGACSPNVVAYNT 270
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-C 232
V+ F G+ A F E+ G++ + T NL++D LCK ++ A V ++ +
Sbjct: 271 VIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNG 330
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
P+ T+N IHG+ + R+ EA ++MK G P ++ ++ + S C+ +
Sbjct: 331 AQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAA 390
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
E+ D M A+G P++V+Y T++ A G F + I + MK G D R FN LI+
Sbjct: 391 EIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAY 450
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKL--EHC 410
+ V +A+ ++ EM + GV+PD T++T+I+ FS G A +E+ N++
Sbjct: 451 AKRGMVDDAMLIF-TEMQQQGVSPDVVTYSTVISAFSRMGRLTDA---MEKFNQMVARGI 506
Query: 411 KPNVQTFHPLLKS-CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEW 469
+PN +H +++ C G +L+ +M+NK DI + VI+ LC+ +
Sbjct: 507 QPNTAVYHSIIQGFCMHGGLVKA--KELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMD 564
Query: 470 AYLLF 474
A+ +F
Sbjct: 565 AHDIF 569
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 115/467 (24%), Positives = 209/467 (44%), Gaps = 53/467 (11%)
Query: 82 EVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKS--ALGIFRWAGSCPGYEHSSEIYEM 139
++FQ + ++ A P+ N +IH F + ++ A +F + G + Y +
Sbjct: 249 DLFQMMAKEG--GACSPNVVAYNTVIHGFFKEGETGKACSLFHEM-TRQGVKPDVVTYNL 305
Query: 140 MVDILGKVRQMDQMRALLEEMSKG----HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
++D L K R MD+ +L +M+ VT N + + ++ G+ ++A + F ++
Sbjct: 306 IIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCM---IHGYATLGRLKEAAKMFRKMK 362
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS------------------------ 231
+ GL N N L +LCK G+ + A +F + +
Sbjct: 363 SRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFA 422
Query: 232 ------------CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
I + FNI IH + K VD+A EM+ G P V++YST+I
Sbjct: 423 DMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVI 482
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG-S 338
++ R + E ++M A+G PN Y +++ G +A + +M G
Sbjct: 483 SAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIP 542
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
+PD FFN +I +L + RV +A ++ + + + G PD TF ++I + G +KAF
Sbjct: 543 RPDIVFFNSVINSLCKDGRVMDAHDIFDL-VTDIGERPDVITFTSLIDGYCLVGKMDKAF 601
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
+L+ M ++ + ++ T+ LL FK G+ ++ L+ L +M + + + TY +++
Sbjct: 602 KILDAM-EVVGVETDIVTYSTLLDGYFKNGRINDGLT-LFREM-QRKGVKPNTVTYGIML 658
Query: 459 HGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
GL RA + A F EMI T +IL + + + D A
Sbjct: 659 AGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEA 705
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 178/384 (46%), Gaps = 10/384 (2%)
Query: 106 LIHRFKDD--WKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK- 162
L+H + + + +G+F S G ++ +++ K +D + EM +
Sbjct: 411 LLHGYASEGWFADMIGLFNSMKS-NGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQ 469
Query: 163 GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELA 222
G + T + V+ FS G+ DA+ F+++ G++ NT + ++ C G + A
Sbjct: 470 GVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKA 529
Query: 223 RSVFLEL-KSCIP-PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQ 280
+ + E+ IP P+ FN I+ CK RV +A + G P VI+++++I
Sbjct: 530 KELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLID 589
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
YC K +++LD M+ G ++VTY+T++ K+G + + + +M+ G KP
Sbjct: 590 GYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKP 649
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
++ + ++ L RA R A + EM E+G S + ++ + ++A +
Sbjct: 650 NTVTYGIMLAGLFRAGRTVAARKKFH-EMIESGTTVTVSIYGIILGGLCRNNCADEAIIL 708
Query: 401 LEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHG 460
+++ + + K ++ + ++ + +K + +E ++ L ++ L + +TY ++I
Sbjct: 709 FQKLGTM-NVKFSITILNTMINAMYKVQRKEE--AKELFATISASGLLPNESTYGVMIIN 765
Query: 461 LCRANKCEWAYLLFKEMIGHDITP 484
L + E A +F M I P
Sbjct: 766 LLKDGAVEDANNMFSSMEKSGIVP 789
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 125/278 (44%), Gaps = 6/278 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVT-LNTIAKVMRRFSGAGQWEDAVRTFDELG 195
+ ++D V +MD+ +L+ M + T + T + ++ + G+ D + F E+
Sbjct: 584 FTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQ 643
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
G++ NT T ++L L + G+ AR F E+ +S + I + G C+ N D
Sbjct: 644 RKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCAD 703
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA Q++ + +T+I + + + EL + A G PN TY ++
Sbjct: 704 EAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMI 763
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV-YVYQVEMPENG 373
L K G E+A + M+ G P SR N +I L + +A Y+ +V+
Sbjct: 764 INLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKR-- 821
Query: 374 VAPDTSTFNTMITMFSHHG-HHEKAFHVLEEMNKLEHC 410
+ + ST + M+++FS G +HE + + N + C
Sbjct: 822 ILLEASTTSLMLSLFSRKGKYHEDMKLLPAKYNFFDGC 859
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 137/360 (38%), Gaps = 55/360 (15%)
Query: 172 AKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTL--------CKEGKVELAR 223
A R +G +DA FDEL ++N L L C LA
Sbjct: 78 AATERVRAGTLSRDDAHHMFDELFRQATPVPGRSLNGFLTALARATSSSACITDGPALAL 137
Query: 224 SVFLEL------KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
++F + +P HT++I + C+ R D + G I+ ST
Sbjct: 138 ALFNRVCREQAGPRVVPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITAST 197
Query: 278 IIQSYCRQYNFSK-VYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIV 336
+++ C + V LL M GC PNV +Y+ ++ L +
Sbjct: 198 LLKCLCYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDN---------------- 241
Query: 337 GSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV-APDTSTFNTMITMFSHHGHHE 395
S Q A+ ++Q+ E G +P+ +NT+I F G
Sbjct: 242 -------------------SMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETG 282
Query: 396 KAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYT 455
KA + EM + + KP+V T++ ++ + K D+ ++L+ + + D TY
Sbjct: 283 KACSLFHEMTR-QGVKPDVVTYNLIIDALCKARAMDK--AELVLRQMTTNGAQPDTVTYN 339
Query: 456 LVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEAVMKK 514
+IHG + + A +F++M + P C L + K +AAE +++ K
Sbjct: 340 CMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAK 399
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 62/300 (20%), Positives = 121/300 (40%), Gaps = 9/300 (3%)
Query: 38 SSPIESYCSDGARLDHHQV--LCVDSPRLPDIDVIISKVH---VGSSEDEVFQSLKQDHV 92
+S I S C DG +D H + L D PD+ S + + D+ F+ L V
Sbjct: 550 NSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEV 609
Query: 93 CNAIQPSHYLVNKLIHRFKDD-WKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMD 151
L FK+ L +FR G + ++ Y +M+ L + +
Sbjct: 610 VGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQR-KGVKPNTVTYGIMLAGLFRAGRTV 668
Query: 152 QMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLL 210
R EM G VT++ ++ ++A+ F +LGT ++ + +N ++
Sbjct: 669 AARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMI 728
Query: 211 DTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCH 269
+ + K + E A+ +F + S + PN T+ + I K V++A M+ G
Sbjct: 729 NAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIV 788
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI 329
P + II+ + +K L ++ + T + ++S ++ G + E +++
Sbjct: 789 PGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYHEDMKL 848
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 119/462 (25%), Positives = 205/462 (44%), Gaps = 87/462 (18%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +++D L K R+ D+ R L +EM ++G + + + ++ F +G+WE A F+E+
Sbjct: 124 YSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEML 183
Query: 196 TFGLEKNTETMNLLLDTLCKEGK---------VELARSVFLELKS--------CIP---- 234
G+ + T ++L+D LCKEGK V + R L++ + C+
Sbjct: 184 DVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRIS 243
Query: 235 ---------------PNAHTFNIFIHGWCKINRVDEAQWTIQEM------KGHGCHPCVI 273
P+A + + G C+ ++ A QEM G C P +I
Sbjct: 244 EATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLI 303
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
SYS II C+ + EL EM+AQG P+V++YTT++ SG +E+A + +M
Sbjct: 304 SYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEM 363
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
VG +PD + LI L + +V EA + +V + + G PD T T++
Sbjct: 364 LDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVI-QRGCIPDVVTCTTLVKGLCMKHR 422
Query: 394 HEKAFHVLEEMNKLE----------------------------------------HCKPN 413
KA + +M KL +CKPN
Sbjct: 423 ISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPN 482
Query: 414 VQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLL 473
++ ++ K G+ DE +L +M + D+ +YT +IHG CR+ K + A L
Sbjct: 483 AISYSIIIDGLCKCGREDEA-RELFKEM-KALGVIPDVISYTSLIHGFCRSGKWKDAKYL 540
Query: 474 FKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEAVMKK 514
F EM+ + P T +++D + K+ + +A E +E ++++
Sbjct: 541 FNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQR 582
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 125/470 (26%), Positives = 214/470 (45%), Gaps = 30/470 (6%)
Query: 62 PRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALG 119
P L +II + EDE + K+ I P LIH F W+ A
Sbjct: 300 PTLISYSIIIDGLCKDRREDEARELFKEMKA-QGIMPDVISYTTLIHGFCLSGKWEKAKC 358
Query: 120 IFRW---AGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEE-MSKGHIVTLNTIAKVM 175
+F G P SS +++D+L K ++ + LLE + +G I + T ++
Sbjct: 359 LFNEMLDVGIQPDVTTSS----VLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLV 414
Query: 176 RRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS---- 231
+ + A + F ++ G N T L+ LC+ G +++A + + S
Sbjct: 415 KGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSP 474
Query: 232 ----CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYN 287
C PNA +++I I G CK R DEA+ +EMK G P VISY+++I +CR
Sbjct: 475 YGINC-KPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGK 533
Query: 288 FSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNC 347
+ L +EM G P+V T++ ++ L K G EA + E M G P++ +
Sbjct: 534 WKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTT 593
Query: 348 LIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM--- 404
L+ L R+ EA ++ ++M + G PD T+ T++ G+ + A + ++M
Sbjct: 594 LVKGLCMNDRISEATQLF-MKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSD 652
Query: 405 --NKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC 462
+ KP+V ++ ++ K G+ DE +L +M + ++ +YT +IHG C
Sbjct: 653 TGQYGTNFKPDVISYSIIIDGLCKHGREDEA-RELFKEM-KALGVIPNVISYTSLIHGFC 710
Query: 463 RANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA--EKIEA 510
R+ K E A LF EM+ + T +++ ++ D A +K+EA
Sbjct: 711 RSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKALFQKMEA 760
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 185/391 (47%), Gaps = 19/391 (4%)
Query: 139 MMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTF 197
+++D+ K ++ + LLE M +G I+ + T + +++ + +A + F +
Sbjct: 15 VLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKL 74
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVFLELKS--------CIPPNAHTFNIFIHGWCK 249
G + L+ LC+ GK+ +A + E+ + C P +++I I G CK
Sbjct: 75 GCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKC-KPTLVSYSIIIDGLCK 133
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
R DEA+ +EMK G P VISY+++I +CR + K L +EM G +V T
Sbjct: 134 DRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTT 193
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM 369
+ ++ L K G EA + E M G D ++ LI L R+ EA ++ + M
Sbjct: 194 SSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLF-MSM 252
Query: 370 PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM-NKLEH----CKPNVQTFHPLLKSC 424
+ G PD + T++ G+ A + +EM N CKP + ++ ++
Sbjct: 253 QKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGL 312
Query: 425 FKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
K + DE +L +M + D+ +YT +IHG C + K E A LF EM+ I P
Sbjct: 313 CKDRREDEA-RELFKEM-KAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQP 370
Query: 485 RYQTCRLILDEV-KQKHMYDAAEKIEAVMKK 514
T +++D + K+ + +A + +E V+++
Sbjct: 371 DVTTSSVLIDMLCKKGKVIEANKLLEVVIQR 401
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 154/334 (46%), Gaps = 50/334 (14%)
Query: 198 GLEKNTETMNLLLDTLCKEGKV----EL-------------------------------A 222
G++ + T +L+D CKEGKV EL A
Sbjct: 5 GIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEA 64
Query: 223 RSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEM------KGHGCHPCVISY 275
+F+ +K P+A + + G C+ +++ A QEM G C P ++SY
Sbjct: 65 TQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSY 124
Query: 276 STIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKI 335
S II C+ + EL EM+AQG P+V++YT+++ +SG +E+A + +M
Sbjct: 125 SIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLD 184
Query: 336 VGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHE 395
VG + D + LI L + +V EA + +V M + G D T++T+I
Sbjct: 185 VGIRSDVTTSSMLIDILCKEGKVIEANELLEV-MIQRGCILDIVTYSTLIKGLCMKHRIS 243
Query: 396 KAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVN---KHHLSLDIT 452
+A + M KL C+P+ + L+K +TG + L QL +M+N ++ + T
Sbjct: 244 EATRLFMSMQKL-GCRPDAIAYGTLMKGLCQTGNINTAL-QLHQEMLNDTGRYGIKCKPT 301
Query: 453 --TYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
+Y+++I GLC+ + + A LFKEM I P
Sbjct: 302 LISYSIIIDGLCKDRREDEARELFKEMKAQGIMP 335
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 117/249 (46%), Gaps = 34/249 (13%)
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
G P V + +I +C++ + ELL+ M +GC ++VTY+T++ L EA
Sbjct: 5 GIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEA 64
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
++ MK +G +PD+ + L+ L + ++ A++++Q EM DTS +
Sbjct: 65 TQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQ-EMLN-----DTSQYGI--- 115
Query: 387 MFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHH 446
CKP + ++ ++ K + DE +L +M +
Sbjct: 116 ----------------------KCKPTLVSYSIIIDGLCKDRREDEA-RELFKEMKAQGM 152
Query: 447 LSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAA 505
+ D+ +YT +IHG CR+ K E A LF EM+ I T +++D + K+ + +A
Sbjct: 153 MP-DVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEAN 211
Query: 506 EKIEAVMKK 514
E +E ++++
Sbjct: 212 ELLEVMIQR 220
>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
Length = 1096
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 122/464 (26%), Positives = 206/464 (44%), Gaps = 52/464 (11%)
Query: 65 PDIDVIISKVHVGSSEDEVFQS--LKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGI 120
PD+ ++V +E +S L Q + P+ N ++H + K +K+A+ +
Sbjct: 191 PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIEL 250
Query: 121 FRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI----VTLNTIAKVMR 176
S G + Y M++ L + ++ + LL +M K I VT NT+ +
Sbjct: 251 LDHMKS-KGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTL---IN 306
Query: 177 RFSGAGQWEDAVRTFDELGTFGLEKNTETMN----------------------------- 207
FS G+ A + +E+ +FGL N T N
Sbjct: 307 GFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTP 366
Query: 208 ------LLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTI 260
+LLD LCK + +LAR ++ +K + + T+ I G CK +DEA +
Sbjct: 367 SEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLL 426
Query: 261 QEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKS 320
EM G P +++YS +I +C+ F E++ + G PN + Y+T++ +
Sbjct: 427 NEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRM 486
Query: 321 GDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTST 380
G +EAIRI E M + G D FN L+ +L +A +V EA + M +G+ P+T +
Sbjct: 487 GCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRC-MTSDGILPNTVS 545
Query: 381 FNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDD 440
F+ +I + + G KAF V +EM K+ H P T+ LLK K G E ++
Sbjct: 546 FDCLINGYGNSGEGLKAFSVFDEMTKVGH-HPTFFTYGSLLKGLCKGGHLRE--AEKFLK 602
Query: 441 MVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
++ ++D Y ++ +C++ A LF EM+ I P
Sbjct: 603 SLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILP 646
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/415 (24%), Positives = 192/415 (46%), Gaps = 26/415 (6%)
Query: 115 KSALGIFRWAGSCPGYE--HSSEIYEMMVDILGKVRQMDQMRALLEEMSK---------G 163
K AL +W PG E H ++ + IL + R D R +L+E+S G
Sbjct: 51 KLALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVFG 110
Query: 164 HIVTLNTIAK--------VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK 215
++T + ++R + G +D++ F +G +G + T N +L ++ K
Sbjct: 111 ALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVK 170
Query: 216 EGKVELARSVFLE--LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI 273
G+ +++ FL+ LK I P+ TFNI I+ C +++ + +Q+M+ G P ++
Sbjct: 171 SGE-DVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIV 229
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
+Y+T++ YC++ F ELLD M+++G +V TY ++ L +S + + M
Sbjct: 230 TYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM 289
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
+ P+ +N LI +V A + EM G++P+ TFN +I G+
Sbjct: 290 RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLN-EMLSFGLSPNHVTFNALIDGHISEGN 348
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
++A + M + + P+ ++ LL K + D L++ + ++ + + T
Sbjct: 349 FKEALKMFYMM-EAKGLTPSEVSYGVLLDGLCKNAEFD--LARGFYMRMKRNGVCVGRIT 405
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
YT +I GLC+ + A +L EM I P T +++ + + A++I
Sbjct: 406 YTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEI 460
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/410 (23%), Positives = 178/410 (43%), Gaps = 42/410 (10%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHI--------VTLNTIAKVMRRFSGA------- 181
Y M+D L K +D+ LL EMSK I +N KV RF A
Sbjct: 406 YTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKV-GRFKTAKEIVCRI 464
Query: 182 ----------------------GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV 219
G ++A+R ++ + G ++ T N+L+ +LCK GKV
Sbjct: 465 YRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKV 524
Query: 220 ELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTI 278
A + S I PN +F+ I+G+ +A EM G HP +Y ++
Sbjct: 525 AEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSL 584
Query: 279 IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
++ C+ + + + L + A + V Y T+++ + KSG+ +A+ + +M
Sbjct: 585 LKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSI 644
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
PDS + LI L R + A+ + V P+ + + G +
Sbjct: 645 LPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGI 704
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
+ E+M+ L H P++ T + ++ + GK ++ + LL +M N++ ++TTY +++
Sbjct: 705 YFREQMDNLGH-TPDIVTTNAMIDGYSRMGKIEKT-NDLLPEMGNQNG-GPNLTTYNILL 761
Query: 459 HGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
HG + ++LL++ +I + I P TC ++ + + +M + KI
Sbjct: 762 HGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKI 811
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 106/471 (22%), Positives = 195/471 (41%), Gaps = 47/471 (9%)
Query: 83 VFQSLKQDHVCNAIQPSHYLVNKL--IHRFKDDWKSALGIFRWAGSCPGYEHSSEIYE-- 138
+ + +D + I L+N + RFK + I+R S G +S+ IY
Sbjct: 425 LLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCC 484
Query: 139 MMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
M + +R + M +LE ++ H T N + + + + E+ +R + + G
Sbjct: 485 RMGCLKEAIRIYEAM--ILEGHTRDHF-TFNVLVTSLCKAGKVAEAEEFMRC---MTSDG 538
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQ 257
+ NT + + L++ G+ A SVF E+ K P T+ + G CK + EA+
Sbjct: 539 ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 598
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
++ + + Y+T++ + C+ N +K L EM + P+ TYT+++S L
Sbjct: 599 KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 658
Query: 318 AKSGDFEEAIRITEKMKIVGSK-PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
+ G AI ++ + G+ P+ + C + + +A + + +Y ++ +M G P
Sbjct: 659 CRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIY-FREQMDNLGHTP 717
Query: 377 DTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC--- 433
D T N MI +S G EK +L EM ++ PN+ T++ LL K
Sbjct: 718 DIVTTNAMIDGYSRMGKIEKTNDLLPEMGN-QNGGPNLTTYNILLHGYSKRKDVSTSFLL 776
Query: 434 -----LSQLLDDMVNKHHLSLDIT-------------------------TYTLVIHGLCR 463
L+ +L D + H L L I T+ ++I C
Sbjct: 777 YRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCA 836
Query: 464 ANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
+ WA+ L K M I+ TC ++ + + H + + + M K
Sbjct: 837 NGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSK 887
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 149/364 (40%), Gaps = 39/364 (10%)
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHT 239
AGQW+ + +++ G + T N ++D + GK+E + E+ + PN T
Sbjct: 697 AGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTT 756
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+NI +HG+ K V + + + +G P ++ +++ C ++L
Sbjct: 757 YNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFI 816
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
+G + T+ ++S +G+ A + + M +G D + ++ L R R Q
Sbjct: 817 CRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQ 876
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQ---- 415
E+ V EM + G++P++ + +I G + AF V EEM + C PNV
Sbjct: 877 ESRMVLH-EMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAM 935
Query: 416 ------------------------------TFHPLLKSCFKTGKTDECLSQLLDDMVNKH 445
+F L+ C K G E L L +++
Sbjct: 936 VRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALE--LRVVMSNC 993
Query: 446 HLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCR-LILDEVKQKHMYDA 504
L LD+ +Y ++I GLC A+ L++EM G T + LI + ++ +
Sbjct: 994 GLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSG 1053
Query: 505 AEKI 508
A+ I
Sbjct: 1054 ADII 1057
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 84/386 (21%), Positives = 164/386 (42%), Gaps = 42/386 (10%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
++ +++ G + + ++ +EM+K GH T T +++ G +A + L
Sbjct: 546 FDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH 605
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINR-- 252
+T N LL +CK G + A S+F E+ + I P+++T+ I G C+ +
Sbjct: 606 AVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTV 665
Query: 253 -------------------------VD----EAQWTI-----QEMKGHGCHPCVISYSTI 278
VD QW ++M G P +++ + +
Sbjct: 666 IAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAM 725
Query: 279 IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
I Y R K +LL EM Q PN+ TY ++ +K D + + + + G
Sbjct: 726 IDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGI 785
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
PD + L+ + ++ ++ + + + + GV D TFN +I+ +G AF
Sbjct: 786 LPDKLTCHSLVLGICESNMLEIGLKILKAFICR-GVEVDRYTFNMLISKCCANGEINWAF 844
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
+++ M L + T ++ + + E S+++ ++K +S + Y +I
Sbjct: 845 DLVKVMTSL-GISLDKDTCDAMVSVLNRNHRFQE--SRMVLHEMSKQGISPESRKYIGLI 901
Query: 459 HGLCRANKCEWAYLLFKEMIGHDITP 484
+GLCR + A+++ +EMI H I P
Sbjct: 902 NGLCRVGDIKTAFVVKEEMIAHKICP 927
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 124/279 (44%), Gaps = 4/279 (1%)
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
N ++I I + + + ++ + M +G +P V + + I+ S + V+ L
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 181
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
EM + P+V T+ +++ L G FE++ + +KM+ G P +N +++ +
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 241
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQ 415
R + A+ + M GV D T+N +I K + +L +M K PN
Sbjct: 242 GRFKAAIELLD-HMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRK-RMIHPNEV 299
Query: 416 TFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFK 475
T++ L+ GK SQLL++M++ LS + T+ +I G + A +F
Sbjct: 300 TYNTLINGFSNEGKV-LIASQLLNEMLS-FGLSPNHVTFNALIDGHISEGNFKEALKMFY 357
Query: 476 EMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
M +TP + ++LD + + +D A MK+
Sbjct: 358 MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKR 396
>gi|356495305|ref|XP_003516519.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
mitochondrial-like [Glycine max]
Length = 618
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 184/396 (46%), Gaps = 20/396 (5%)
Query: 89 QDHVCNAIQPSHYLVNKLIHRFKDDWKSA---LGIFRWAGSCPGYEHSSEIYEMMVDILG 145
Q H ++ PS V++LI D KSA L FRWA + P + HS Y ++ L
Sbjct: 25 QTHSSSSSAPSQEHVSQLIL----DQKSASEALEYFRWASTVPNFVHSQSTYRALIHKLC 80
Query: 146 KVRQMDQMRALLEEM--SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNT 203
R+ D ++ LL+EM S G + ++R A ++ D + F +
Sbjct: 81 TFRRFDTVKQLLDEMPHSLGAPPGDDIFITIIRGLGRARMTRTVIKVLDLVYKFHGSPSL 140
Query: 204 ETMNLLLDTLCKEGKVELARSVFLE--LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQ 261
+ N +LD L KE +++AR + + + S + + +TF I + G C NR+ E +Q
Sbjct: 141 KIFNSILDVLVKE-DIDMAREFYRKSMMASGVEGDDYTFGILMKGLCLTNRIGEGFKLLQ 199
Query: 262 EMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSG 321
+K G P + Y+T++ + CR + L++EM+ PN VT+ ++S K G
Sbjct: 200 LIKSRGVAPNTVVYNTLLHALCRNGKVGRARNLMNEME----DPNDVTFNILISGYCKEG 255
Query: 322 DFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTF 381
+ +A+ + EK +G PD ++ L A R EA V + + G D +
Sbjct: 256 NSVQALVLLEKSFSMGFVPDVVSVTKVLEILCNAGRTMEAAEVLE-RVESMGGLLDVVAY 314
Query: 382 NTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDM 441
NT+I F G + H L++M + C PNV T++ L+ ++G D L L +DM
Sbjct: 315 NTLIKGFCGAGKVKVGLHFLKQMEN-KGCLPNVDTYNVLISGFSESGMLDLAL-DLFNDM 372
Query: 442 VNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
+ + T+ +I GLC + E + + + M
Sbjct: 373 -KTDGIKWNFVTFDTLIRGLCSEERIEDGFSILELM 407
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 101/433 (23%), Positives = 179/433 (41%), Gaps = 78/433 (18%)
Query: 133 SSEIYEMMVDILGKVRQMDQMRALLEE--MSKGHIVTLNTIAKVMRRFSGAGQWEDAVRT 190
S +I+ ++D+L K +D R + M+ G T +M+ + + +
Sbjct: 139 SLKIFNSILDVLVK-EDIDMAREFYRKSMMASGVEGDDYTFGILMKGLCLTNRIGEGFKL 197
Query: 191 FDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCK- 249
+ + G+ NT N LL LC+ GKV AR++ E++ PN TFNI I G+CK
Sbjct: 198 LQLIKSRGVAPNTVVYNTLLHALCRNGKVGRARNLMNEMED---PNDVTFNILISGYCKE 254
Query: 250 ----------------------------------INRVDEAQWTIQEMKGHGCHPCVISY 275
R EA ++ ++ G V++Y
Sbjct: 255 GNSVQALVLLEKSFSMGFVPDVVSVTKVLEILCNAGRTMEAAEVLERVESMGGLLDVVAY 314
Query: 276 STIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKI 335
+T+I+ +C L +M+ +GC PNV TY ++S ++SG + A+ + MK
Sbjct: 315 NTLIKGFCGAGKVKVGLHFLKQMENKGCLPNVDTYNVLISGFSESGMLDLALDLFNDMKT 374
Query: 336 VGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV-EMPENGVAPDTSTFNTMI-TMFSHHGH 393
G K + F+ LI L R+++ + ++ E + G S +N++I + +G
Sbjct: 375 DGIKWNFVTFDTLIRGLCSEERIEDGFSILELMEESKEGSRGHISPYNSIIYGLLKKNGF 434
Query: 394 HEKAFHVLEEMNK------------LEHCK--------------------PNVQTFHPLL 421
E A L +M LEHCK P++ ++ L+
Sbjct: 435 DESA-EFLTKMGNLFPRAVDRSLMILEHCKKGAIEDAKRVYDQMIDEGGIPSILVYNCLV 493
Query: 422 KSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHD 481
K G E + +L+++M+ + + +T+ VI G CR K E A L +++
Sbjct: 494 HGFSKQGNVREAV-ELMNEMIANNCFPIP-STFNAVITGFCRQGKVESALKLVEDITARG 551
Query: 482 ITPRYQTCRLILD 494
P +T ++D
Sbjct: 552 CVPNTETYSPLID 564
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 157/338 (46%), Gaps = 12/338 (3%)
Query: 152 QMRALLEE-MSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLL 210
Q LLE+ S G + + ++ KV+ AG+ +A + + + G + N L+
Sbjct: 259 QALVLLEKSFSMGFVPDVVSVTKVLEILCNAGRTMEAAEVLERVESMGGLLDVVAYNTLI 318
Query: 211 DTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGC 268
C GKV++ +E K C+P N T+N+ I G+ + +D A +MK G
Sbjct: 319 KGFCGAGKVKVGLHFLKQMENKGCLP-NVDTYNVLISGFSESGMLDLALDLFNDMKTDGI 377
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQ--AQGCPPNVVTYTTVMSYLAKSGDFEEA 326
+++ T+I+ C + + +L+ M+ +G ++ Y +++ L K F+E+
Sbjct: 378 KWNFVTFDTLIRGLCSEERIEDGFSILELMEESKEGSRGHISPYNSIIYGLLKKNGFDES 437
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
KM + + R + +I + +++A VY + E G+ P +N ++
Sbjct: 438 AEFLTKMGNLFPRAVDR--SLMILEHCKKGAIEDAKRVYDQMIDEGGI-PSILVYNCLVH 494
Query: 387 MFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHH 446
FS G+ +A ++ EM +C P TF+ ++ + GK + L +L++D+ +
Sbjct: 495 GFSKQGNVREAVELMNEMIA-NNCFPIPSTFNAVITGFCRQGKVESAL-KLVEDITARGC 552
Query: 447 LSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
+ + TY+ +I LCR + A +F +M+ I P
Sbjct: 553 VP-NTETYSPLIDVLCRNGDLQKAMQVFMQMVDKGILP 589
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 127/278 (45%), Gaps = 38/278 (13%)
Query: 156 LLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLC 214
L++M +KG + ++T ++ FS +G + A+ F+++ T G++ N T + L+ LC
Sbjct: 333 FLKQMENKGCLPNVDTYNVLISGFSESGMLDLALDLFNDMKTDGIKWNFVTFDTLIRGLC 392
Query: 215 KEGKVELARSV------------------------------------FLELKSCIPPNAH 238
E ++E S+ FL + P A
Sbjct: 393 SEERIEDGFSILELMEESKEGSRGHISPYNSIIYGLLKKNGFDESAEFLTKMGNLFPRAV 452
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
++ I CK +++A+ +M G P ++ Y+ ++ + +Q N + EL++EM
Sbjct: 453 DRSLMILEHCKKGAIEDAKRVYDQMIDEGGIPSILVYNCLVHGFSKQGNVREAVELMNEM 512
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRV 358
A C P T+ V++ + G E A+++ E + G P++ ++ LI L R +
Sbjct: 513 IANNCFPIPSTFNAVITGFCRQGKVESALKLVEDITARGCVPNTETYSPLIDVLCRNGDL 572
Query: 359 QEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEK 396
Q+A+ V+ ++M + G+ PD +N+++ S H K
Sbjct: 573 QKAMQVF-MQMVDKGILPDLFIWNSLLLSLSQERHFSK 609
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 124/326 (38%), Gaps = 45/326 (13%)
Query: 226 FLELKSCIPPNAH---TFNIFIHGWCKINRVDEAQWTIQEMK-GHGCHPCVISYSTIIQS 281
+ S +P H T+ IH C R D + + EM G P + TII+
Sbjct: 55 YFRWASTVPNFVHSQSTYRALIHKLCTFRRFDTVKQLLDEMPHSLGAPPGDDIFITIIRG 114
Query: 282 YCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEK-MKIVGSKP 340
R V ++LD + P++ + +++ L K D + A K M G +
Sbjct: 115 LGRARMTRTVIKVLDLVYKFHGSPSLKIFNSILDVLVKE-DIDMAREFYRKSMMASGVEG 173
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
D F L+ L +R+ E + Q+ + GVAP+T +NT++ +G +A ++
Sbjct: 174 DDYTFGILMKGLCLTNRIGEGFKLLQL-IKSRGVAPNTVVYNTLLHALCRNGKVGRARNL 232
Query: 401 LEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL------------------SQLLDDMV 442
+ EM PN TF+ L+ K G + + L +++L+ +
Sbjct: 233 MNEMED-----PNDVTFNILISGYCKEGNSVQALVLLEKSFSMGFVPDVVSVTKVLEILC 287
Query: 443 NKHHLS---------------LDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
N LD+ Y +I G C A K + K+M P
Sbjct: 288 NAGRTMEAAEVLERVESMGGLLDVVAYNTLIKGFCGAGKVKVGLHFLKQMENKGCLPNVD 347
Query: 488 TCRLILDEVKQKHMYDAAEKIEAVMK 513
T +++ + M D A + MK
Sbjct: 348 TYNVLISGFSESGMLDLALDLFNDMK 373
>gi|255660864|gb|ACU25601.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 484
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 195/390 (50%), Gaps = 16/390 (4%)
Query: 100 HYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEE 159
H LV ++H K + AL FRW +EH+ E + +++ILG+ +++ R +L +
Sbjct: 12 HELVYNVLHSSKTS-EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLD 70
Query: 160 M-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
M KG + ++ + G +++V+ F ++ G+E+ ++ N L + + G+
Sbjct: 71 MPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGR 130
Query: 219 VELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
+A+ F ++ S I P HTFN+ I G+ +V+ A ++MK P V++Y+T
Sbjct: 131 YMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNT 190
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+I Y R + + EM+ + P VVTYTT++ ++A+R+ E+MK G
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFG 250
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP-DTSTFNTMITMFSHHGHHEK 396
KP++ ++ L+ L A ++ EA + + EM + +AP D S F +I+ G+ +
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMSEARVILK-EMMDKYLAPTDNSIFLRLISSHCKSGNLDA 309
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCF-KTGKTDECLSQLLDDMVNK-------HHLS 448
A VL+ M +L P + LL F K G+ D+ + +LLD ++ K L
Sbjct: 310 AVDVLKAMIRL--SVPTEAGHYGLLIENFCKAGQYDKAV-KLLDKLIEKDIILRPQSTLH 366
Query: 449 LDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
L+ + Y +I LC + A L ++++
Sbjct: 367 LEPSAYNPMIEYLCNNGQASKAETLVRQLM 396
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 134/311 (43%), Gaps = 4/311 (1%)
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQ 257
E N ET +++ L + K+ AR + L++ K + + + + I + K V E+
Sbjct: 41 FEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESV 100
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
Q+M+ G + SY+ + + R+ + ++M ++G P T+ ++
Sbjct: 101 KMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGF 160
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
SG E A R E MK PD +N +I R +++EA Y VEM + P
Sbjct: 161 FLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEK-YFVEMKGRNIEPT 219
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
T+ T+I + + A ++EEM KPN T+ LL K E +
Sbjct: 220 VVTYTTLIKGYVSVDQVDDALRLVEEMKGF-GIKPNAITYSTLLPGLCNAEKMSEA-RVI 277
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVK 497
L +M++K+ D + + +I C++ + A + K MI + L+++
Sbjct: 278 LKEMMDKYLAPTDNSIFLRLISSHCKSGNLDAAVDVLKAMIRLSVPTEAGHYGLLIENFC 337
Query: 498 QKHMYDAAEKI 508
+ YD A K+
Sbjct: 338 KAGQYDKAVKL 348
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 126/267 (47%), Gaps = 6/267 (2%)
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
+ ++++ A+ + +M G + +I SY ++ + ++ +M+ G +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIK 116
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
+Y + + + G + A R KM G +P FN +I+ + +V+ A ++ +
Sbjct: 117 SYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFE-D 175
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M ++PD T+NTMI + E+A EM K + +P V T+ L+K
Sbjct: 176 MKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEM-KGRNIEPTVVTYTTLIKGYVSVD 234
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ D+ L +L+++M + + TY+ ++ GLC A K A ++ KEM+ + P +
Sbjct: 235 QVDDAL-RLVEEM-KGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNS 292
Query: 489 --CRLILDEVKQKHMYDAAEKIEAVMK 513
RLI K ++ A + ++A+++
Sbjct: 293 IFLRLISSHCKSGNLDAAVDVLKAMIR 319
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 5/205 (2%)
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N T+ ++ L ++ A I M G + D + +I + G+ VQE+V ++
Sbjct: 44 NRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMF 103
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
Q +M E GV ++N + + G + A +M E +P TF+ ++ F
Sbjct: 104 Q-KMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLS-EGIEPTRHTFNVMIWGFF 161
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
+GK E ++ +DM ++ +S D+ TY +I+G R K E A F EM G +I P
Sbjct: 162 LSGKV-ETANRFFEDMKSRE-ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPT 219
Query: 486 YQT-CRLILDEVKQKHMYDAAEKIE 509
T LI V + DA +E
Sbjct: 220 VVTYTTLIKGYVSVDQVDDALRLVE 244
>gi|326504498|dbj|BAJ91081.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 793
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 111/391 (28%), Positives = 189/391 (48%), Gaps = 20/391 (5%)
Query: 131 EHSSEIYEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQWED 186
E + Y +V + + A+ M + IVT N + V + A W+D
Sbjct: 175 EPDASAYTALVSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVLHVYSKI--AVPWKD 232
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV-ELARSVFLELKSC-IPPNAHTFNIFI 244
V D + G+ + T N L+ + C+ G + + A VF E+++ P+ TFN +
Sbjct: 233 VVALVDSMKNDGIPLDRYTYNTLI-SCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLL 291
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
+ K DEA ++EM+ GC P V++Y+++I SY + + EL +EM+ +G
Sbjct: 292 DVYGKARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQ 351
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
P+V+TYTT++S L ++G + AI ++M G KP+ +N LI G + E + V
Sbjct: 352 PDVITYTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAV 411
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
+ ++ G PD T+NT++ +F +G + V +EM K + P T+ L+ S
Sbjct: 412 FD-DLRSAGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYV-PERDTYVSLISSY 469
Query: 425 FKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
+ G D+ + ++ M+ + + DI+TY V+ L R + E A LF EM D P
Sbjct: 470 SRCGLFDQSM-EIYKRMI-EAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMENLDCRP 527
Query: 485 RYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
+ +L H Y A+K++ MK L
Sbjct: 528 DELSYSSLL------HAYANAKKLDK-MKAL 551
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 180/397 (45%), Gaps = 51/397 (12%)
Query: 83 VFQSLKQDHVCNAIQPSHYLVNKLIH--RFKDDWKSALGIFRWAGSCPGYEHSSEIYEMM 140
+ S+K D I Y N LI R +K A +F + G+E + +
Sbjct: 236 LVDSMKND----GIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAA-GFEPDKVTFNSL 290
Query: 141 VDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLE 200
+D+ GK R D+ +L+EM ELG G
Sbjct: 291 LDVYGKARMHDEAIGVLKEM--------------------------------ELG--GCP 316
Query: 201 KNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWT 259
+ T N L+ + K+G ++ A + E++ I P+ T+ I G + ++D A T
Sbjct: 317 PSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDVITYTTLISGLDRAGKIDAAIGT 376
Query: 260 IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK 319
EM +GC P + +Y+ +I+ + + F ++ + D++++ G P+VVT+ T+++ +
Sbjct: 377 YDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDDLRSAGFVPDVVTWNTLLAVFGQ 436
Query: 320 SGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTS 379
+G E + ++MK G P+ + LI + R +++ +Y+ M E G+ PD S
Sbjct: 437 NGLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQSMEIYK-RMIEAGIYPDIS 495
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLD 439
T+N +++ + G E+A + EM L+ C+P+ ++ LL + K D+ + L +
Sbjct: 496 TYNAVLSALARGGRWEQAEKLFAEMENLD-CRPDELSYSSLLHAYANAKKLDK-MKALSE 553
Query: 440 DM----VNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
D+ + HH + T LV + ++ E A+L
Sbjct: 554 DIYAEKIESHHGL--VKTLVLVNSKVNNLSETEKAFL 588
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 93/452 (20%), Positives = 188/452 (41%), Gaps = 54/452 (11%)
Query: 33 SHIVSSSPIESYCSDG-----ARLDHHQVLCVDSPRLPDIDVIISKVHVGSSEDEVFQSL 87
S + +S I SY DG A L + P + +IS + D +
Sbjct: 318 SVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDVITYTTLISGLDRAGKIDAAIGTY 377
Query: 88 KQDHVCNAIQPSHYLVNKLI--HRFKDDWKSALGIF---RWAGSCPGYEHSSEIYEMMVD 142
+ + N +P+ N LI H + + + +F R AG P + ++
Sbjct: 378 -DEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDDLRSAGFVP----DVVTWNTLLA 432
Query: 143 ILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEK 201
+ G+ ++ + +EM K G++ +T ++ +S G ++ ++ + + G+
Sbjct: 433 VFGQNGLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQSMEIYKRMIEAGIYP 492
Query: 202 NTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWC------------ 248
+ T N +L L + G+ E A +F E+++ P+ +++ +H +
Sbjct: 493 DISTYNAVLSALARGGRWEQAEKLFAEMENLDCRPDELSYSSLLHAYANAKKLDKMKALS 552
Query: 249 -----------------------KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQ 285
K+N + E + E+ C + + ++ Y +
Sbjct: 553 EDIYAEKIESHHGLVKTLVLVNSKVNNLSETEKAFLELGRRRCSLDINVLNAMVSVYGKN 612
Query: 286 YNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFF 345
KV E+L M+ + TY ++M ++ GD E+ I ++K G++PD +
Sbjct: 613 RMVKKVEEILSLMKGSSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSGARPDRYSY 672
Query: 346 NCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMN 405
N +IY GR +++EA ++ EM +G+ PD T+N + + + E+A ++ M
Sbjct: 673 NTMIYAYGRKGQMKEASRLFS-EMKSSGLIPDIVTYNIFVKSYVANSMFEEAIDLVRYM- 730
Query: 406 KLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
CKPN +T++ +L+ + GK + S L
Sbjct: 731 VTRGCKPNERTYNSILQEYCRHGKIADAKSFL 762
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/326 (19%), Positives = 131/326 (40%), Gaps = 39/326 (11%)
Query: 119 GIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVT-LNTIAKVMRR 177
G+F+ GY + Y ++ + DQ + + M + I ++T V+
Sbjct: 445 GVFKEMKKS-GYVPERDTYVSLISSYSRCGLFDQSMEIYKRMIEAGIYPDISTYNAVLSA 503
Query: 178 FSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVE----LARSVFLE----- 228
+ G+WE A + F E+ + + + LL K++ L+ ++ E
Sbjct: 504 LARGGRWEQAEKLFAEMENLDCRPDELSYSSLLHAYANAKKLDKMKALSEDIYAEKIESH 563
Query: 229 ---LKSCIPPNA------------------------HTFNIFIHGWCKINRVDEAQWTIQ 261
+K+ + N+ + N + + K V + + +
Sbjct: 564 HGLVKTLVLVNSKVNNLSETEKAFLELGRRRCSLDINVLNAMVSVYGKNRMVKKVEEILS 623
Query: 262 EMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSG 321
MKG + +Y++++ Y R + K +L E+++ G P+ +Y T++ + G
Sbjct: 624 LMKGSSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSGARPDRYSYNTMIYAYGRKG 683
Query: 322 DFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTF 381
+EA R+ +MK G PD +N + + S +EA+ + + M G P+ T+
Sbjct: 684 QMKEASRLFSEMKSSGLIPDIVTYNIFVKSYVANSMFEEAIDLVRY-MVTRGCKPNERTY 742
Query: 382 NTMITMFSHHGHHEKAFHVLEEMNKL 407
N+++ + HG A L + +L
Sbjct: 743 NSILQEYCRHGKIADAKSFLSNLPQL 768
Score = 38.9 bits (89), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y M+ G+ QM + L EM S G I + T ++ + +E+A+ +
Sbjct: 672 YNTMIYAYGRKGQMKEASRLFSEMKSSGLIPDIVTYNIFVKSYVANSMFEEAIDLVRYMV 731
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIP 234
T G + N T N +L C+ GK+ A+S L P
Sbjct: 732 TRGCKPNERTYNSILQEYCRHGKIADAKSFLSNLPQLHP 770
>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
Length = 651
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 117/419 (27%), Positives = 184/419 (43%), Gaps = 84/419 (20%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKG---HIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y +V L K + D+ + +L EM ++G VT +T+ + +F G E A R +
Sbjct: 81 YTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKF---GSEEQAFRVLE 137
Query: 193 ELGTFGLEKNTETMNLLLDTLC-KEGKVELARSVF------------------------- 226
++ G+ + ++ LC K VELA V
Sbjct: 138 DVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKA 197
Query: 227 ---------LEL---KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVIS 274
LE+ K C+P N TF I I G CK NRV EAQ +++M GC P V++
Sbjct: 198 KDLDSAYKLLEVMIEKGCVP-NVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVT 256
Query: 275 YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
YST+I C+Q YEL M+ + CPPNVVT+ ++ L K+ EEA ++ +M+
Sbjct: 257 YSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMR 316
Query: 335 IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV-APDTSTFNTMITMFSHHGH 393
G PD +N LI L ++ +V EA ++Q +PE+GV A + T++T+ ++ G
Sbjct: 317 ETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQT-IPESGVSAANAVTYSTLFHGYAALGR 375
Query: 394 HEKAFHVLEEMNK--------------LEHCK--------------------PNVQTFHP 419
A + + LE+CK P V T
Sbjct: 376 MADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSA 435
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
+L F+ T+ + QL D M + + D Y LV+ G+ RA+K A + +++I
Sbjct: 436 VLGGLFEGNHTERAI-QLFDSMAAR-GCTDDALIYNLVVEGMARASKHNKALAVLEQVI 492
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 160/344 (46%), Gaps = 40/344 (11%)
Query: 170 TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL 229
T ++R FS AG + A++ +E+ + G E N L+ LC G+V A F +
Sbjct: 11 TYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAM 70
Query: 230 KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYS------------- 276
P+ T+ +H CK + DEAQ ++EM GC P +++S
Sbjct: 71 AKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEE 130
Query: 277 ----------------------TIIQSYCRQYNFSKVY-ELLDEMQAQGCPPNVVTYTTV 313
TIIQ C +YN ++ ++L + A+G P V+ + V
Sbjct: 131 QAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLV 190
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
++ K+ D + A ++ E M G P+ F LI L +A+RV EA + + +M G
Sbjct: 191 INGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLE-KMVTGG 249
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
+P+ T++T+I G + A+ + + M + +C PNV T + L+ K + +E
Sbjct: 250 CSPNVVTYSTVINGLCKQGQVDDAYELFQLMER-RNCPPNVVTHNILIDGLCKAKRIEE- 307
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
++ L + + + DI TY +I GLC++ + + A+ LF+ +
Sbjct: 308 -ARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTI 350
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 108/436 (24%), Positives = 186/436 (42%), Gaps = 45/436 (10%)
Query: 98 PSHYLVNKLIHRFKD--DWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRA 155
P+ + LI F D A+ + S G+E ++ ++ ++ L ++ +
Sbjct: 7 PNKFTYGILIRGFSSAGDLDIAIQLLEEMKS-NGFEGNAVVHTTLMKGLCDAGRVVEALE 65
Query: 156 LLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK 215
M+K + T ++ AG++++A E+ G +T T + L+D LCK
Sbjct: 66 HFRAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCK 125
Query: 216 EG------------------------------------KVELARSVF-LELKSCIPPNAH 238
G VELA V + + P
Sbjct: 126 FGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVL 185
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
FN+ I+G+CK +D A ++ M GC P V +++ +I C+ + +LL++M
Sbjct: 186 MFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKM 245
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRV 358
GC PNVVTY+TV++ L K G ++A + + M+ P+ N LI L +A R+
Sbjct: 246 VTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRI 305
Query: 359 QEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFH 418
+EA +Y M E G APD T+N++I ++AF + + + + N T+
Sbjct: 306 EEARQLYH-RMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYS 364
Query: 419 PLLKSCFKTGK-TDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
L G+ D C ++ +V+K S D+ TYT +I C+ ++ L +EM
Sbjct: 365 TLFHGYAALGRMADAC--RIFSMLVDK-GFSPDLATYTSLILEYCKTSRAVEVVELVEEM 421
Query: 478 IGHDITPRYQTCRLIL 493
PR T +L
Sbjct: 422 ASKGFPPRVNTLSAVL 437
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 148/306 (48%), Gaps = 8/306 (2%)
Query: 202 NTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTI 260
N T +L+ G +++A + E+KS NA + G C RV EA
Sbjct: 8 NKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEHF 67
Query: 261 QEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKS 320
+ M C P V++Y+ ++ + C+ F + +L EM A+GC P+ VT++T++ L K
Sbjct: 68 RAM-AKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKF 126
Query: 321 GDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL-GRASRVQEAVYVYQVEMPENGVAPDTS 379
G E+A R+ E + G F +I L + + V+ A V V + + G P
Sbjct: 127 GSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAK-GFTPTVL 185
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLD 439
FN +I F + A+ +LE M + + C PNV TF L+ K + E QLL+
Sbjct: 186 MFNLVINGFCKAKDLDSAYKLLEVMIE-KGCVPNVFTFTILITGLCKANRVGEA-QQLLE 243
Query: 440 DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQ 498
MV S ++ TY+ VI+GLC+ + + AY LF+ M + P T +++D + K
Sbjct: 244 KMVT-GGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKA 302
Query: 499 KHMYDA 504
K + +A
Sbjct: 303 KRIEEA 308
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 98/415 (23%), Positives = 186/415 (44%), Gaps = 49/415 (11%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKG----HIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
+ +++ L K ++ + + LLE+M G ++VT +T V+ GQ +DA F
Sbjct: 222 FTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYST---VINGLCKQGQVDDAYELFQ 278
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK--SCIP---------------- 234
+ N T N+L+D LCK ++E AR ++ ++ C P
Sbjct: 279 LMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSF 338
Query: 235 -------------------PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISY 275
NA T++ HG+ + R+ +A + G P + +Y
Sbjct: 339 QVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATY 398
Query: 276 STIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKI 335
+++I YC+ +V EL++EM ++G PP V T + V+ L + E AI++ + M
Sbjct: 399 TSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAA 458
Query: 336 VGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ--VEMPENGVAPDTSTFNTMITMFSHHGH 393
G D+ +N ++ + RAS+ +A+ V + ++ + P +S + ++ G
Sbjct: 459 RGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGR 518
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
+ A +L +M++ V +++ LL + + DE +Q+ + MV+ + +I+T
Sbjct: 519 TDDAKQLLHKMSE-RGFAAAVSSYNGLLSGLSRLQRWDEA-TQVFEAMVSAGP-APEIST 575
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+VI LC A K + AY L + M P +TC ++ + D A K+
Sbjct: 576 VNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKL 630
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 143/283 (50%), Gaps = 10/283 (3%)
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYEL 294
PN T+ I I G+ +D A ++EMK +G + ++T+++ C + +V E
Sbjct: 7 PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLC---DAGRVVEA 63
Query: 295 LDEMQAQG--CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
L+ +A C P+V+TYT ++ L K+G F+EA + +M G PD+ F+ LI L
Sbjct: 64 LEHFRAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGL 123
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT-MFSHHGHHEKAFHVLEEMNKLEHCK 411
+ ++A V + ++ + G+ + F T+I + + + E A VL + +
Sbjct: 124 CKFGSEEQAFRVLE-DVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIA-KGFT 181
Query: 412 PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAY 471
P V F+ ++ K D +LL+ M+ K + ++ T+T++I GLC+AN+ A
Sbjct: 182 PTVLMFNLVINGFCKAKDLDSAY-KLLEVMIEKGCVP-NVFTFTILITGLCKANRVGEAQ 239
Query: 472 LLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
L ++M+ +P T +++ + ++ D A ++ +M++
Sbjct: 240 QLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMER 282
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 114/241 (47%), Gaps = 4/241 (1%)
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
C P +Y +I+ + + +LL+EM++ G N V +TT+M L +G EA+
Sbjct: 5 CMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEAL 64
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITM 387
M PD + L++ L +A + EA + + EM G APDT TF+T+I
Sbjct: 65 EHFRAMA-KDCAPDVMTYTALVHALCKAGKFDEAQGMLR-EMIARGCAPDTVTFSTLIDG 122
Query: 388 FSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHL 447
G E+AF VLE++ + + F +++ + E S++L ++ K
Sbjct: 123 LCKFGSEEQAFRVLEDVIQRGMGNSDA-AFETIIQRLCNKYNSVELASKVLGVVIAK-GF 180
Query: 448 SLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEK 507
+ + + LVI+G C+A + AY L + MI P T +++ + + + A++
Sbjct: 181 TPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQ 240
Query: 508 I 508
+
Sbjct: 241 L 241
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 130/327 (39%), Gaps = 44/327 (13%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTI--AKVMRRFSGAGQWEDAVRTFDEL 194
Y ++D L K Q+D+ L + + + + N + + + ++ G+ DA R F L
Sbjct: 327 YNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSML 386
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRV 253
G + T L+ CK + + E+ S PP +T + + G + N
Sbjct: 387 VDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHT 446
Query: 254 DEAQWTIQEMKGHGC--------------------------------------HPCVISY 275
+ A M GC +P +
Sbjct: 447 ERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAV 506
Query: 276 STIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKI 335
+++S C+ +LL +M +G V +Y ++S L++ ++EA ++ E M
Sbjct: 507 DALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVS 566
Query: 336 VGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHE 395
G P+ N +I L A++V +A + Q M + G PD T NT+I + G +
Sbjct: 567 AGPAPEISTVNVVISWLCSAAKVDDAYELVQ-RMSKLGCCPDIETCNTLIGGYCKSGRAD 625
Query: 396 KAFHVLEEMNKLEHCKPNVQTFHPLLK 422
A +LEEM + +PN T H LL+
Sbjct: 626 LARKLLEEMTE-AGLEPN-DTTHDLLE 650
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 83/187 (44%), Gaps = 5/187 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLN----TIAKVMRRFSGAGQW 184
G + IY ++V+ + + + ++ A+LE++ N + ++ G+
Sbjct: 460 GCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRT 519
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIP-PNAHTFNIF 243
+DA + ++ G + N LL L + + + A VF + S P P T N+
Sbjct: 520 DDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVV 579
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
I C +VD+A +Q M GC P + + +T+I YC+ +LL+EM G
Sbjct: 580 ISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGL 639
Query: 304 PPNVVTY 310
PN T+
Sbjct: 640 EPNDTTH 646
>gi|449436409|ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 180/365 (49%), Gaps = 9/365 (2%)
Query: 134 SEIYEMMVDILGKVRQMDQMRALLE-EMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
++ M+ LG++ +++ + + E +S+G+ T+ + ++ + +G +++A++ F+
Sbjct: 187 GKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFE 246
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSV--FLE-LKSCIPPNAHTFNIFIHGWCK 249
+ GL+ N T N ++D C +G VE R V F E L++ + P+ T+N + +
Sbjct: 247 SMKVSGLKPNLVTYNAVIDA-CGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSR 305
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
+ A+ EM G V +Y+T++ + C+ YE++ EM + PNVVT
Sbjct: 306 GGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVT 365
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM 369
Y+T+ AK+G E+A+ + +MK +G D +N L+ + R ++A+ V + EM
Sbjct: 366 YSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCK-EM 424
Query: 370 PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
+GV D T+N ++ + G + V +EM K + PN+ T+ L+ K
Sbjct: 425 GSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKK-DRVFPNLLTYSTLIDVYSKGSL 483
Query: 430 TDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTC 489
+E + + + L D+ Y+ +I+ LC+ + A LL EM I P T
Sbjct: 484 YEEAMEVFRE--FKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTY 541
Query: 490 RLILD 494
I+D
Sbjct: 542 NSIID 546
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 172/358 (48%), Gaps = 12/358 (3%)
Query: 117 ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIA 172
A G+F A S GY ++ + ++ GK D+ + E M K ++VT N +
Sbjct: 206 AKGVFETALS-EGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVI 264
Query: 173 KVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KS 231
+ G +++ V F+E+ G++ + T N LL + G E AR++F E+
Sbjct: 265 DACGK--GGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDR 322
Query: 232 CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKV 291
I + T+N + CK ++D A + EM G P V++YST+ Y +
Sbjct: 323 GIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDA 382
Query: 292 YELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYT 351
L +EM+ G + V+Y T++S AK G FE+A+++ ++M G K D +N L+
Sbjct: 383 LNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDG 442
Query: 352 LGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCK 411
G+ + E V++ EM ++ V P+ T++T+I ++S +E+A V E K K
Sbjct: 443 YGKQGKFNEVTRVFK-EMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREF-KQAGLK 500
Query: 412 PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEW 469
+V + L+ + K G D + LL D + K + ++ TY +I R+ E+
Sbjct: 501 ADVVLYSELINALCKNGLVDSAV--LLLDEMTKEGIRPNVVTYNSIIDAFGRSTTAEF 556
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 156/339 (46%), Gaps = 8/339 (2%)
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKN--TETMNLLLDTLCKEGKVELARSVF-LELK 230
++R G+ A+R FD KN + + ++ TL + GKVELA+ VF L
Sbjct: 156 LLRELGNRGECWKAIRCFDFALVREGRKNERGKLASAMISTLGRLGKVELAKGVFETALS 215
Query: 231 SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQ-YNFS 289
F+ I + K DEA + MK G P +++Y+ +I + + F
Sbjct: 216 EGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFK 275
Query: 290 KVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
+V E+ +EM G P+ +TY ++++ ++ G +E A + +M G D +N L+
Sbjct: 276 RVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLL 335
Query: 350 YTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH 409
+ + ++ A Y +EMP + P+ T++TM ++ G E A ++ EM L
Sbjct: 336 DAVCKGGQMDLA-YEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGI 394
Query: 410 CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEW 469
V +++ LL K G+ ++ L ++ +M + D+ TY ++ G + K
Sbjct: 395 GLDRV-SYNTLLSIYAKLGRFEDAL-KVCKEM-GSSGVKKDVVTYNALLDGYGKQGKFNE 451
Query: 470 AYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+FKEM + P T ++D + +Y+ A ++
Sbjct: 452 VTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEV 490
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 195/418 (46%), Gaps = 47/418 (11%)
Query: 129 GYEHSSEIYEMMVDIL---GKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWE 185
GYE ++ + +++ L G+V + ++ + EM GH L TI ++ +G+
Sbjct: 153 GYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM--GHKPDLITINTLVNGLCLSGKEA 210
Query: 186 DAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF------------------- 226
+A+ D++ +G + N T +L+ +CK G+ LA +
Sbjct: 211 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 227 ------------------LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGC 268
+E+K I N T+NI I G+C R D+ +++M
Sbjct: 271 DGLCKHGSLDNAFNLFNEMEMKG-ITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKI 329
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
+P V+++S +I S+ ++ + EL EM +G P+ +TYT+++ K ++A +
Sbjct: 330 NPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQ 389
Query: 329 ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF 388
+ + M G P+ R FN LI +A+R+ + + +++ +M GV DT T+NT+I F
Sbjct: 390 MVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR-KMSLRGVVADTVTYNTLIQGF 448
Query: 389 SHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
G A + +EM PN+ T+ LL G++++ L + + K +
Sbjct: 449 CELGKLNVAKELFQEMVS-RKVPPNIVTYKILLDGLCDNGESEKALEIF--EKIEKSKME 505
Query: 449 LDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAE 506
LDI Y ++IHG+C A+K + A+ LF + + P +T +++ + +K AE
Sbjct: 506 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAE 563
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 167/363 (46%), Gaps = 43/363 (11%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +++D L K +D L EM KG + T ++ F AG+W+D + ++
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-------------------------- 229
+ N T ++L+D+ KEGK+ A + E+
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385
Query: 230 -----------KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTI 278
K C PN TFNI I+G+CK NR+D+ ++M G ++Y+T+
Sbjct: 386 KANQMVDLMVSKGC-DPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTL 444
Query: 279 IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
IQ +C + EL EM ++ PPN+VTY ++ L +G+ E+A+ I EK++
Sbjct: 445 IQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKM 504
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
+ D +N +I+ + AS+V +A ++ +P GV P T+N MI G +A
Sbjct: 505 ELDIGIYNIIIHGMCNASKVDDAWDLF-CSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAE 563
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
+ +M + H P+ T++ L+++ G D S L + + + S+D +T +VI
Sbjct: 564 LLFRKMEEDGHA-PDGWTYNILIRA--HLGDGDATKSVKLIEELKRCGFSVDASTIKMVI 620
Query: 459 HGL 461
L
Sbjct: 621 DML 623
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 187/418 (44%), Gaps = 53/418 (12%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
+ + + K +Q D + AL ++M KG L T++ ++ F + A ++
Sbjct: 91 FSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKII 150
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCI-----PPNAHTFNIFIHGWCKI 250
G E NT T + L++ LC EG+V A LEL + P+ T N ++G C
Sbjct: 151 KLGYEPNTITFSTLINGLCLEGRVSEA----LELVDRMVEMGHKPDLITINTLVNGLCLS 206
Query: 251 NRVDEAQWTIQEMKGHGCHPCVIS-----------------------------------Y 275
+ EA I +M +GC P ++ Y
Sbjct: 207 GKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY 266
Query: 276 STIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKI 335
S II C+ + + L +EM+ +G N++TY ++ +G +++ ++ M
Sbjct: 267 SIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIK 326
Query: 336 VGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHE 395
P+ F+ LI + + +++EA +++ EM G+APDT T+ ++I F H +
Sbjct: 327 RKINPNVVTFSVLIDSFVKEGKLREAEELHK-EMIHRGIAPDTITYTSLIDGFCKENHLD 385
Query: 396 KAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYT 455
KA +++ M + C PN++TF+ L+ K + D+ L +L M + ++ D TY
Sbjct: 386 KANQMVDLMVS-KGCDPNIRTFNILINGYCKANRIDDGL-ELFRKMSLRGVVA-DTVTYN 442
Query: 456 LVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV----KQKHMYDAAEKIE 509
+I G C K A LF+EM+ + P T +++LD + + + + EKIE
Sbjct: 443 TLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIE 500
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 160/335 (47%), Gaps = 8/335 (2%)
Query: 164 HIVTLNTIAKVMRRFSGAG---QWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVE 220
H L T+ R FS Q++ + ++ G+ N T++++++ C+ K+
Sbjct: 81 HSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLC 140
Query: 221 LARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
LA S ++ K PN TF+ I+G C RV EA + M G P +I+ +T++
Sbjct: 141 LAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLV 200
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
C ++ L+D+M GC PN VTY V++ + KSG A+ + KM+ K
Sbjct: 201 NGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIK 260
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
D+ ++ +I L + + A ++ EM G+ + T+N +I F + G +
Sbjct: 261 LDAVKYSIIIDGLCKHGSLDNAFNLFN-EMEMKGITTNIITYNILIGGFCNAGRWDDGAK 319
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIH 459
+L +M K PNV TF L+ S K GK E +L +M+++ ++ D TYT +I
Sbjct: 320 LLRDMIK-RKINPNVVTFSVLIDSFVKEGKLREA-EELHKEMIHR-GIAPDTITYTSLID 376
Query: 460 GLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
G C+ N + A + M+ P +T ++++
Sbjct: 377 GFCKENHLDKANQMVDLMVSKGCDPNIRTFNILIN 411
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 117/272 (43%), Gaps = 41/272 (15%)
Query: 273 ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEK 332
+SY ++S +L +M P V+ ++ + S +AK+ ++ + + ++
Sbjct: 54 LSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQ 113
Query: 333 MKI-----------------------------------VGSKPDSRFFNCLIYTLGRASR 357
M++ +G +P++ F+ LI L R
Sbjct: 114 MELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGR 173
Query: 358 VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH-CKPNVQT 416
V EA+ + M E G PD T NT++ G +A ++++M +E+ C+PN T
Sbjct: 174 VSEALELVD-RMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKM--VEYGCQPNAVT 230
Query: 417 FHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKE 476
+ P+L K+G+T L+ L + + ++ LD Y+++I GLC+ + A+ LF E
Sbjct: 231 YGPVLNVMCKSGQT--ALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNE 288
Query: 477 MIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
M IT T +++ +D K+
Sbjct: 289 MEMKGITTNIITYNILIGGFCNAGRWDDGAKL 320
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 107/232 (46%), Gaps = 7/232 (3%)
Query: 92 VCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQ 149
V P+ N LI+ + + L +FR S G + Y ++ ++ +
Sbjct: 395 VSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM-SLRGVVADTVTYNTLIQGFCELGK 453
Query: 150 MDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNL 208
++ + L +EM S+ + T ++ G+ E A+ F+++ +E + N+
Sbjct: 454 LNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNI 513
Query: 209 LLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
++ +C KV+ A +F L LK + P T+NI I G CK + EA+ ++M+
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLPLKG-VKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEED 572
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLA 318
G P +Y+ +I+++ + +K +L++E++ G + T V+ L+
Sbjct: 573 GHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLS 624
>gi|225440005|ref|XP_002276355.1| PREDICTED: pentatricopeptide repeat-containing protein At2g37230
[Vitis vinifera]
Length = 763
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 115/471 (24%), Positives = 224/471 (47%), Gaps = 27/471 (5%)
Query: 27 SSSENCSHIVSSSPIESYCSDGARLDHHQVLCVDSPRLP--------DIDVIISKVHVGS 78
S+ + S + +P+ S+ L + SPR P I+ II ++
Sbjct: 41 SAGDLTSSPIPETPVSGSPSEPGNLTAAEAGEKASPRTPRGKLRNPEKIEDIICRMMA-- 98
Query: 79 SEDEVFQSLKQDHVCNAI-QPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIY 137
+ + + Q+ + + + Q H LV ++H ++ AL FRW + H + +
Sbjct: 99 --NRAWTTRLQNSIRSLVPQFDHSLVWNVLHGSRNS-DHALQFFRWVERAGLFRHDRDTH 155
Query: 138 EMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGT 196
+++ILG+ +++ R +L +M KG + ++ + AG +++V+ F ++
Sbjct: 156 LKIIEILGRASKLNHARCILLDMPKKGVEWDEDLFVLLIDSYGKAGIVQESVKVFQKMKE 215
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRVDE 255
G+E+ ++ + L + + G+ +A+ F L + P HT+NI I G+ +V+
Sbjct: 216 LGVERTIKSYDALFKVILRRGRYMMAKRYFNAMLNEGVMPTCHTYNIMIWGFFLSLKVET 275
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
A +EMK P V++Y+T+I Y R + + EM+ + P V++YTT++
Sbjct: 276 ANRFFEEMKERRISPDVVTYNTMINGYYRIKKMEEAEKFFVEMKGRNIEPTVISYTTMIK 335
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
G ++ +R+ E+MK G KP++ ++ L+ L ++ EA V + EM E +A
Sbjct: 336 GYVSVGRVDDGLRLFEEMKSFGIKPNAVTYSTLLPGLCDGEKMLEAQNVVK-EMVERYIA 394
Query: 376 P-DTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
P D S F +IT G + A VL+ M +L + L+++ K+G D +
Sbjct: 395 PKDNSIFMRLITCQCKAGQLDAAADVLKAMIRL-SIPTEAGHYGVLIENFCKSGVYDRAV 453
Query: 435 SQLLDDMVNK-------HHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
+LLD ++ K + L ++ + Y L+I LC + + A LF++++
Sbjct: 454 -KLLDKLIEKEIILRPQNSLEMESSGYNLIIEYLCNSGQTSKAETLFRQLM 503
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 127/301 (42%), Gaps = 4/301 (1%)
Query: 209 LLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG 267
+++ L + K+ AR + L++ K + + F + I + K V E+ Q+MK G
Sbjct: 158 IIEILGRASKLNHARCILLDMPKKGVEWDEDLFVLLIDSYGKAGIVQESVKVFQKMKELG 217
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
+ SY + + R+ + + M +G P TY ++ S E A
Sbjct: 218 VERTIKSYDALFKVILRRGRYMMAKRYFNAMLNEGVMPTCHTYNIMIWGFFLSLKVETAN 277
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITM 387
R E+MK PD +N +I R +++EA + VEM + P ++ TMI
Sbjct: 278 RFFEEMKERRISPDVVTYNTMINGYYRIKKMEEAEKFF-VEMKGRNIEPTVISYTTMIKG 336
Query: 388 FSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHL 447
+ G + + EEM KPN T+ LL K E ++ +MV ++
Sbjct: 337 YVSVGRVDDGLRLFEEMKSF-GIKPNAVTYSTLLPGLCDGEKMLEA-QNVVKEMVERYIA 394
Query: 448 SLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEK 507
D + + +I C+A + + A + K MI I ++++ + +YD A K
Sbjct: 395 PKDNSIFMRLITCQCKAGQLDAAADVLKAMIRLSIPTEAGHYGVLIENFCKSGVYDRAVK 454
Query: 508 I 508
+
Sbjct: 455 L 455
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 124/267 (46%), Gaps = 6/267 (2%)
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
+ ++++ A+ + +M G + +I SY + + ++ +M+ G +
Sbjct: 164 RASKLNHARCILLDMPKKGVEWDEDLFVLLIDSYGKAGIVQESVKVFQKMKELGVERTIK 223
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
+Y + + + G + A R M G P +N +I+ + +V+ A ++ E
Sbjct: 224 SYDALFKVILRRGRYMMAKRYFNAMLNEGVMPTCHTYNIMIWGFFLSLKVETANRFFE-E 282
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M E ++PD T+NTMI + E+A EM K + +P V ++ ++K G
Sbjct: 283 MKERRISPDVVTYNTMINGYYRIKKMEEAEKFFVEM-KGRNIEPTVISYTTMIKGYVSVG 341
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ D+ L +L ++M + + TY+ ++ GLC K A + KEM+ I P+ +
Sbjct: 342 RVDDGL-RLFEEM-KSFGIKPNAVTYSTLLPGLCDGEKMLEAQNVVKEMVERYIAPKDNS 399
Query: 489 C--RLILDEVKQKHMYDAAEKIEAVMK 513
RLI + K + AA+ ++A+++
Sbjct: 400 IFMRLITCQCKAGQLDAAADVLKAMIR 426
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 88/457 (19%), Positives = 178/457 (38%), Gaps = 87/457 (19%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y M++ ++++M++ EM +I T+ + +++ + G+ +D +R F+E+
Sbjct: 295 YNTMINGYYRIKKMEEAEKFFVEMKGRNIEPTVISYTTMIKGYVSVGRVDDGLRLFEEMK 354
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELAR----------------SVFLELKSC------- 232
+FG++ N T + LL LC K+ A+ S+F+ L +C
Sbjct: 355 SFGIKPNAVTYSTLLPGLCDGEKMLEAQNVVKEMVERYIAPKDNSIFMRLITCQCKAGQL 414
Query: 233 --------------IPPNAHTFNIFIHGWCKINRVDEAQWTIQ---------------EM 263
IP A + + I +CK D A + EM
Sbjct: 415 DAAADVLKAMIRLSIPTEAGHYGVLIENFCKSGVYDRAVKLLDKLIEKEIILRPQNSLEM 474
Query: 264 KGHGCHPCV---------------------------ISYSTIIQSYCRQYNFSKVYELLD 296
+ G + + I+++ +I+ + ++ +E+L
Sbjct: 475 ESSGYNLIIEYLCNSGQTSKAETLFRQLMKKGVQDPIAFNNLIRGHSKEGAPESAFEILK 534
Query: 297 EMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRAS 356
M + P Y ++ K G+ +A + M G PDS F ++ +L
Sbjct: 535 IMGRREVPREADAYRLLIESFLKKGEPADAKTALDGMIENGHIPDSSLFRSVMESLFEDG 594
Query: 357 RVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQT 416
R+Q A V M E GV + ++ GH E+A ++ + C+P+
Sbjct: 595 RIQTASRVMN-NMVEKGVKENMDLVAKILEALLLRGHVEEALGRIDLLMN-NGCEPD--- 649
Query: 417 FHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKE 476
F LL GKT L +LLD + + + ++ ++Y V+ L A K AY + +
Sbjct: 650 FDGLLSVLCAKGKTIAAL-KLLDFGLERDY-NISFSSYENVLDALLTAGKTLNAYSILCK 707
Query: 477 MIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
++ + +C+ ++ + ++ A+ + ++K
Sbjct: 708 IMQKGGATDWSSCKDLIRSLNEEGNTKQADILSRMIK 744
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 80/176 (45%), Gaps = 4/176 (2%)
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
T+ ++ L ++ A I M G + D F LI + G+A VQE+V V+Q +
Sbjct: 154 THLKIIEILGRASKLNHARCILLDMPKKGVEWDEDLFVLLIDSYGKAGIVQESVKVFQ-K 212
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M E GV +++ + + G + A M E P T++ ++ F +
Sbjct: 213 MKELGVERTIKSYDALFKVILRRGRYMMAKRYFNAMLN-EGVMPTCHTYNIMIWGFFLSL 271
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
K E ++ ++M + +S D+ TY +I+G R K E A F EM G +I P
Sbjct: 272 KV-ETANRFFEEM-KERRISPDVVTYNTMINGYYRIKKMEEAEKFFVEMKGRNIEP 325
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 78/166 (46%), Gaps = 4/166 (2%)
Query: 348 LIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKL 407
+I LGRAS++ A + ++MP+ GV D F +I + G +++ V ++M +L
Sbjct: 158 IIEILGRASKLNHARCIL-LDMPKKGVEWDEDLFVLLIDSYGKAGIVQESVKVFQKMKEL 216
Query: 408 EHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKC 467
+ ++++ L K + G+ + + M+N+ + TY ++I G + K
Sbjct: 217 -GVERTIKSYDALFKVILRRGRY-MMAKRYFNAMLNEGVMP-TCHTYNIMIWGFFLSLKV 273
Query: 468 EWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
E A F+EM I+P T +++ + + AEK MK
Sbjct: 274 ETANRFFEEMKERRISPDVVTYNTMINGYYRIKKMEEAEKFFVEMK 319
>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
sativus]
Length = 686
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 178/364 (48%), Gaps = 19/364 (5%)
Query: 156 LLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLC 214
LL+EM + I + T + ++ F G++ +A +DE+ + +T T + ++D C
Sbjct: 310 LLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFC 369
Query: 215 KEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCV 272
K+ +++ A +F K C P+ TFN I G+C+ RVD+ + EM G
Sbjct: 370 KQNRLDAAEHMFYLTPTKGC-SPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANT 428
Query: 273 ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEK 332
I+Y+T+I +C+ + + +LL EM + G PNVVT T++ L +G ++A+ + +
Sbjct: 429 ITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKA 488
Query: 333 MK-----------IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTF 381
M+ G +PD + +N LI L + EA +Y+ EMP G+ PDT T+
Sbjct: 489 MQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYE-EMPHRGIVPDTITY 547
Query: 382 NTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDM 441
++MI ++A + + M + P+V TF+ L+ K G D+ L +
Sbjct: 548 SSMIDGLCKQSRLDEATQMFDSMGS-KSFSPDVVTFNTLITGYCKAGMVDDGLELFCE-- 604
Query: 442 VNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHM 501
+ + + D TY +I+G + + + A +F+EMI + P T R +L + K
Sbjct: 605 MGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEE 664
Query: 502 YDAA 505
+ A
Sbjct: 665 LERA 668
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 164/376 (43%), Gaps = 42/376 (11%)
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCI 233
+M+ F + A+ TF ++ G T N LL LC E ++ A +F ++
Sbjct: 122 LMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM---C 178
Query: 234 PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
PN TF ++G C+ RV EA + M G P I+Y TI+ C+ +
Sbjct: 179 KPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALN 238
Query: 294 LLDEMQ-AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
LL +M+ PNVV Y T++ L K G +A + +M+ PD +NC+I
Sbjct: 239 LLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGF 298
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM-------- 404
+ R +A + Q EM E + PD TF+ +I F G +A + +EM
Sbjct: 299 CISGRWSDAEQLLQ-EMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPS 357
Query: 405 --------------NKL---EH---------CKPNVQTFHPLLKSCFKTGKTDECLSQLL 438
N+L EH C P++ TF+ L+ + + D+ + +LL
Sbjct: 358 TVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGI-KLL 416
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-K 497
+M + L + TYT +IHG C+ A L +EMI + P TC +LD +
Sbjct: 417 HEM-TEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCD 475
Query: 498 QKHMYDAAEKIEAVMK 513
+ DA E +A+ K
Sbjct: 476 NGKLKDALEMFKAMQK 491
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 179/383 (46%), Gaps = 18/383 (4%)
Query: 143 ILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKN 202
++ V +D+M LE+ + + +T TI M + + +R +E+ + N
Sbjct: 198 VVEAVALLDRM---LEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSH--IIPN 252
Query: 203 TETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQ 261
N ++D L K+G+ A ++F+E++ I P+ T+N I+G+C R +A+ +Q
Sbjct: 253 VVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQ 312
Query: 262 EMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSG 321
EM +P V+++S +I ++ ++ F + EL DEM + P+ VTY++++ K
Sbjct: 313 EMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQN 372
Query: 322 DFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTF 381
+ A + G PD FN LI RA RV + + + EM E G+ +T T+
Sbjct: 373 RLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLH-EMTEAGLVANTITY 431
Query: 382 NTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL---- 437
T+I F G A +L+EM C PNV T + LL GK + L
Sbjct: 432 TTLIHGFCQVGDLNAAQDLLQEMISSGVC-PNVVTCNTLLDGLCDNGKLKDALEMFKAMQ 490
Query: 438 -----LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLI 492
+D + + D+ TY ++I GL K A L++EM I P T +
Sbjct: 491 KSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 550
Query: 493 LDEV-KQKHMYDAAEKIEAVMKK 514
+D + KQ + +A + +++ K
Sbjct: 551 IDGLCKQSRLDEATQMFDSMGSK 573
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 136/275 (49%), Gaps = 10/275 (3%)
Query: 202 NTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTI 260
N + +L+ C K+ A S F ++ K P TFN +HG C +R+ EA
Sbjct: 115 NAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLF 174
Query: 261 QEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKS 320
+M C P V++++T++ CR+ + LLD M G PN +TY T++ + K
Sbjct: 175 HQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKM 230
Query: 321 GDFEEAIRITEKMKIVGS-KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTS 379
GD A+ + KM+ V P+ +N +I L + R +A ++ +EM E + PD
Sbjct: 231 GDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLF-IEMQEKEIFPDIV 289
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLD 439
T+N MI F G A +L+EM + P+V TF L+ + K GK E +L D
Sbjct: 290 TYNCMINGFCISGRWSDAEQLLQEMLE-RKINPDVVTFSALINAFVKEGKFFEA-EELYD 347
Query: 440 DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLF 474
+M+ + + + TY+ +I G C+ N+ + A +F
Sbjct: 348 EMLPRSIIPSTV-TYSSMIDGFCKQNRLDAAEHMF 381
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 98/386 (25%), Positives = 176/386 (45%), Gaps = 27/386 (6%)
Query: 41 IESYCSDGARLDHHQVL--CVDSPRLPDIDVIISKVHVGSSEDEVFQS--LKQDHVCNAI 96
I +C G D Q+L ++ PD+ + ++ E + F++ L + + +I
Sbjct: 295 INGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSI 354
Query: 97 QPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILG--KVRQMDQ 152
PS + +I F ++ +A +F P S +I I G + +++D
Sbjct: 355 IPSTVTYSSMIDGFCKQNRLDAAEHMFYLT---PTKGCSPDIITFNTLIAGYCRAKRVDD 411
Query: 153 MRALLEEMSKGHIVTLNTIA--KVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLL 210
LL EM++ +V NTI ++ F G A E+ + G+ N T N LL
Sbjct: 412 GIKLLHEMTEAGLVA-NTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLL 470
Query: 211 DTLCKEGKVELARSVFLELK------------SCIPPNAHTFNIFIHGWCKINRVDEAQW 258
D LC GK++ A +F ++ + + P+ T+NI I G + EA+
Sbjct: 471 DGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEE 530
Query: 259 TIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLA 318
+EM G P I+YS++I C+Q + ++ D M ++ P+VVT+ T+++
Sbjct: 531 LYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYC 590
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDT 378
K+G ++ + + +M G D+ + LIY + + A+ ++Q EM +GV PDT
Sbjct: 591 KAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQ-EMISSGVYPDT 649
Query: 379 STFNTMITMFSHHGHHEKAFHVLEEM 404
T M+T E+A +LE++
Sbjct: 650 ITIRNMLTGLWSKEELERAVAMLEDL 675
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 140/274 (51%), Gaps = 7/274 (2%)
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
+P NA++F I + +C +++ A T ++ G HP V++++T++ C + S+
Sbjct: 112 MPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEAL 171
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
+L +M C PNVVT+TT+M+ L + G EA+ + ++M G +P+ + ++ +
Sbjct: 172 DLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGM 227
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
+ A+ + + + + P+ +NT+I G H A ++ EM + E P
Sbjct: 228 CKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKE-IFP 286
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
++ T++ ++ +G+ + QLL +M+ + ++ D+ T++ +I+ + K A
Sbjct: 287 DIVTYNCMINGFCISGRWSDA-EQLLQEMLER-KINPDVVTFSALINAFVKEGKFFEAEE 344
Query: 473 LFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAE 506
L+ EM+ I P T ++D +++ DAAE
Sbjct: 345 LYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAE 378
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 78/155 (50%), Gaps = 1/155 (0%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTF 240
G++ +A ++E+ G+ +T T + ++D LCK+ +++ A +F + S P+ TF
Sbjct: 523 GKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTF 582
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
N I G+CK VD+ EM G I+Y T+I + + N ++ EM +
Sbjct: 583 NTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMIS 642
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKI 335
G P+ +T +++ L + E A+ + E +++
Sbjct: 643 SGVYPDTITIRNMLTGLWSKEELERAVAMLEDLQM 677
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 82/173 (47%), Gaps = 8/173 (4%)
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
P+V+ + +M + + G + I + +KM+++ ++ F L+ S++ A+
Sbjct: 79 PSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTILMKCFCSCSKLPFALST 138
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
+ ++ + G P TFNT++ +A + +M CKPNV TF L+
Sbjct: 139 FG-KITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM-----CKPNVVTFTTLMNGL 192
Query: 425 FKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
+ G+ E ++ LLD M+ + L + TY ++ G+C+ A L ++M
Sbjct: 193 CREGRVVEAVA-LLDRML-EDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKM 243
>gi|297741611|emb|CBI32743.3| unnamed protein product [Vitis vinifera]
Length = 772
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 115/471 (24%), Positives = 224/471 (47%), Gaps = 27/471 (5%)
Query: 27 SSSENCSHIVSSSPIESYCSDGARLDHHQVLCVDSPRLP--------DIDVIISKVHVGS 78
S+ + S + +P+ S+ L + SPR P I+ II ++
Sbjct: 41 SAGDLTSSPIPETPVSGSPSEPGNLTAAEAGEKASPRTPRGKLRNPEKIEDIICRMMA-- 98
Query: 79 SEDEVFQSLKQDHVCNAI-QPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIY 137
+ + + Q+ + + + Q H LV ++H ++ AL FRW + H + +
Sbjct: 99 --NRAWTTRLQNSIRSLVPQFDHSLVWNVLHGSRNS-DHALQFFRWVERAGLFRHDRDTH 155
Query: 138 EMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGT 196
+++ILG+ +++ R +L +M KG + ++ + AG +++V+ F ++
Sbjct: 156 LKIIEILGRASKLNHARCILLDMPKKGVEWDEDLFVLLIDSYGKAGIVQESVKVFQKMKE 215
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRVDE 255
G+E+ ++ + L + + G+ +A+ F L + P HT+NI I G+ +V+
Sbjct: 216 LGVERTIKSYDALFKVILRRGRYMMAKRYFNAMLNEGVMPTCHTYNIMIWGFFLSLKVET 275
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
A +EMK P V++Y+T+I Y R + + EM+ + P V++YTT++
Sbjct: 276 ANRFFEEMKERRISPDVVTYNTMINGYYRIKKMEEAEKFFVEMKGRNIEPTVISYTTMIK 335
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
G ++ +R+ E+MK G KP++ ++ L+ L ++ EA V + EM E +A
Sbjct: 336 GYVSVGRVDDGLRLFEEMKSFGIKPNAVTYSTLLPGLCDGEKMLEAQNVVK-EMVERYIA 394
Query: 376 P-DTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
P D S F +IT G + A VL+ M +L + L+++ K+G D +
Sbjct: 395 PKDNSIFMRLITCQCKAGQLDAAADVLKAMIRL-SIPTEAGHYGVLIENFCKSGVYDRAV 453
Query: 435 SQLLDDMVNK-------HHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
+LLD ++ K + L ++ + Y L+I LC + + A LF++++
Sbjct: 454 -KLLDKLIEKEIILRPQNSLEMESSGYNLIIEYLCNSGQTSKAETLFRQLM 503
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 127/301 (42%), Gaps = 4/301 (1%)
Query: 209 LLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG 267
+++ L + K+ AR + L++ K + + F + I + K V E+ Q+MK G
Sbjct: 158 IIEILGRASKLNHARCILLDMPKKGVEWDEDLFVLLIDSYGKAGIVQESVKVFQKMKELG 217
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
+ SY + + R+ + + M +G P TY ++ S E A
Sbjct: 218 VERTIKSYDALFKVILRRGRYMMAKRYFNAMLNEGVMPTCHTYNIMIWGFFLSLKVETAN 277
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITM 387
R E+MK PD +N +I R +++EA + VEM + P ++ TMI
Sbjct: 278 RFFEEMKERRISPDVVTYNTMINGYYRIKKMEEAEKFF-VEMKGRNIEPTVISYTTMIKG 336
Query: 388 FSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHL 447
+ G + + EEM KPN T+ LL K E ++ +MV ++
Sbjct: 337 YVSVGRVDDGLRLFEEMKSF-GIKPNAVTYSTLLPGLCDGEKMLEA-QNVVKEMVERYIA 394
Query: 448 SLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEK 507
D + + +I C+A + + A + K MI I ++++ + +YD A K
Sbjct: 395 PKDNSIFMRLITCQCKAGQLDAAADVLKAMIRLSIPTEAGHYGVLIENFCKSGVYDRAVK 454
Query: 508 I 508
+
Sbjct: 455 L 455
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 124/267 (46%), Gaps = 6/267 (2%)
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
+ ++++ A+ + +M G + +I SY + + ++ +M+ G +
Sbjct: 164 RASKLNHARCILLDMPKKGVEWDEDLFVLLIDSYGKAGIVQESVKVFQKMKELGVERTIK 223
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
+Y + + + G + A R M G P +N +I+ + +V+ A ++ E
Sbjct: 224 SYDALFKVILRRGRYMMAKRYFNAMLNEGVMPTCHTYNIMIWGFFLSLKVETANRFFE-E 282
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M E ++PD T+NTMI + E+A EM K + +P V ++ ++K G
Sbjct: 283 MKERRISPDVVTYNTMINGYYRIKKMEEAEKFFVEM-KGRNIEPTVISYTTMIKGYVSVG 341
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ D+ L +L ++M + + TY+ ++ GLC K A + KEM+ I P+ +
Sbjct: 342 RVDDGL-RLFEEM-KSFGIKPNAVTYSTLLPGLCDGEKMLEAQNVVKEMVERYIAPKDNS 399
Query: 489 C--RLILDEVKQKHMYDAAEKIEAVMK 513
RLI + K + AA+ ++A+++
Sbjct: 400 IFMRLITCQCKAGQLDAAADVLKAMIR 426
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 88/457 (19%), Positives = 178/457 (38%), Gaps = 87/457 (19%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y M++ ++++M++ EM +I T+ + +++ + G+ +D +R F+E+
Sbjct: 295 YNTMINGYYRIKKMEEAEKFFVEMKGRNIEPTVISYTTMIKGYVSVGRVDDGLRLFEEMK 354
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELAR----------------SVFLELKSC------- 232
+FG++ N T + LL LC K+ A+ S+F+ L +C
Sbjct: 355 SFGIKPNAVTYSTLLPGLCDGEKMLEAQNVVKEMVERYIAPKDNSIFMRLITCQCKAGQL 414
Query: 233 --------------IPPNAHTFNIFIHGWCKINRVDEAQWTIQ---------------EM 263
IP A + + I +CK D A + EM
Sbjct: 415 DAAADVLKAMIRLSIPTEAGHYGVLIENFCKSGVYDRAVKLLDKLIEKEIILRPQNSLEM 474
Query: 264 KGHGCHPCV---------------------------ISYSTIIQSYCRQYNFSKVYELLD 296
+ G + + I+++ +I+ + ++ +E+L
Sbjct: 475 ESSGYNLIIEYLCNSGQTSKAETLFRQLMKKGVQDPIAFNNLIRGHSKEGAPESAFEILK 534
Query: 297 EMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRAS 356
M + P Y ++ K G+ +A + M G PDS F ++ +L
Sbjct: 535 IMGRREVPREADAYRLLIESFLKKGEPADAKTALDGMIENGHIPDSSLFRSVMESLFEDG 594
Query: 357 RVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQT 416
R+Q A V M E GV + ++ GH E+A ++ + C+P+
Sbjct: 595 RIQTASRVMN-NMVEKGVKENMDLVAKILEALLLRGHVEEALGRIDLLMN-NGCEPD--- 649
Query: 417 FHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKE 476
F LL GKT L +LLD + + + ++ ++Y V+ L A K AY + +
Sbjct: 650 FDGLLSVLCAKGKTIAAL-KLLDFGLERDY-NISFSSYENVLDALLTAGKTLNAYSILCK 707
Query: 477 MIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
++ + +C+ ++ + ++ A+ + ++K
Sbjct: 708 IMQKGGATDWSSCKDLIRSLNEEGNTKQADILSRMIK 744
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 80/176 (45%), Gaps = 4/176 (2%)
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
T+ ++ L ++ A I M G + D F LI + G+A VQE+V V+Q +
Sbjct: 154 THLKIIEILGRASKLNHARCILLDMPKKGVEWDEDLFVLLIDSYGKAGIVQESVKVFQ-K 212
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M E GV +++ + + G + A M E P T++ ++ F +
Sbjct: 213 MKELGVERTIKSYDALFKVILRRGRYMMAKRYFNAMLN-EGVMPTCHTYNIMIWGFFLSL 271
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
K E ++ ++M + +S D+ TY +I+G R K E A F EM G +I P
Sbjct: 272 KV-ETANRFFEEM-KERRISPDVVTYNTMINGYYRIKKMEEAEKFFVEMKGRNIEP 325
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 78/166 (46%), Gaps = 4/166 (2%)
Query: 348 LIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKL 407
+I LGRAS++ A + ++MP+ GV D F +I + G +++ V ++M +L
Sbjct: 158 IIEILGRASKLNHARCIL-LDMPKKGVEWDEDLFVLLIDSYGKAGIVQESVKVFQKMKEL 216
Query: 408 EHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKC 467
+ ++++ L K + G+ + + M+N+ + TY ++I G + K
Sbjct: 217 -GVERTIKSYDALFKVILRRGRY-MMAKRYFNAMLNEGVMP-TCHTYNIMIWGFFLSLKV 273
Query: 468 EWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
E A F+EM I+P T +++ + + AEK MK
Sbjct: 274 ETANRFFEEMKERRISPDVVTYNTMINGYYRIKKMEEAEKFFVEMK 319
>gi|449518511|ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 180/365 (49%), Gaps = 9/365 (2%)
Query: 134 SEIYEMMVDILGKVRQMDQMRALLE-EMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
++ M+ LG++ +++ + + E +S+G+ T+ + ++ + +G +++A++ F+
Sbjct: 187 GKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFE 246
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELAR--SVFLE-LKSCIPPNAHTFNIFIHGWCK 249
+ GL+ N T N ++D C +G VE R +F E L++ + P+ T+N + +
Sbjct: 247 SMKVSGLKPNLVTYNAVIDA-CGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSR 305
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
+ A+ EM G V +Y+T++ + C+ YE++ EM + PNVVT
Sbjct: 306 GGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVT 365
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM 369
Y+T+ AK+G E+A+ + +MK +G D +N L+ + R ++A+ V + EM
Sbjct: 366 YSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCK-EM 424
Query: 370 PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
+GV D T+N ++ + G + V +EM K + PN+ T+ L+ K
Sbjct: 425 GSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKK-DRVFPNLLTYSTLIDVYSKGSL 483
Query: 430 TDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTC 489
+E + + + L D+ Y+ +I+ LC+ + A LL EM I P T
Sbjct: 484 YEEAMEVFRE--FKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTY 541
Query: 490 RLILD 494
I+D
Sbjct: 542 NSIID 546
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 172/358 (48%), Gaps = 12/358 (3%)
Query: 117 ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIA 172
A G+F A S GY ++ + ++ GK D+ + E M K ++VT N +
Sbjct: 206 AKGVFETALS-EGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVI 264
Query: 173 KVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KS 231
+ G +++ V F+E+ G++ + T N LL + G E AR++F E+
Sbjct: 265 DACGK--GGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDR 322
Query: 232 CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKV 291
I + T+N + CK ++D A + EM G P V++YST+ Y +
Sbjct: 323 GIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDA 382
Query: 292 YELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYT 351
L +EM+ G + V+Y T++S AK G FE+A+++ ++M G K D +N L+
Sbjct: 383 LNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDG 442
Query: 352 LGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCK 411
G+ + E V++ EM ++ V P+ T++T+I ++S +E+A V E K K
Sbjct: 443 YGKQGKFNEVTRVFK-EMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREF-KQAGLK 500
Query: 412 PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEW 469
+V + L+ + K G D + LL D + K + ++ TY +I R+ E+
Sbjct: 501 ADVVLYSELINALCKNGLVDSAV--LLLDEMTKEGIRPNVVTYNSIIDAFGRSTTAEF 556
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 156/339 (46%), Gaps = 8/339 (2%)
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKN--TETMNLLLDTLCKEGKVELARSVF-LELK 230
++R G+ A+R FD KN + + ++ TL + GKVELA+ VF L
Sbjct: 156 LLRELGNRGECWKAIRCFDFALVREGRKNERGKLASAMISTLGRLGKVELAKGVFETALS 215
Query: 231 SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQ-YNFS 289
F+ I + K DEA + MK G P +++Y+ +I + + F
Sbjct: 216 EGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFK 275
Query: 290 KVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
+V E+ +EM G P+ +TY ++++ ++ G +E A + +M G D +N L+
Sbjct: 276 RVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLL 335
Query: 350 YTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH 409
+ + ++ A Y +EMP + P+ T++TM ++ G E A ++ EM L
Sbjct: 336 DAVCKGGQMDLA-YEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGI 394
Query: 410 CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEW 469
V +++ LL K G+ ++ L ++ +M + D+ TY ++ G + K
Sbjct: 395 GLDRV-SYNTLLSIYAKLGRFEDAL-KVCKEM-GSSGVKKDVVTYNALLDGYGKQGKFNE 451
Query: 470 AYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+FKEM + P T ++D + +Y+ A ++
Sbjct: 452 VTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEV 490
>gi|255660898|gb|ACU25618.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
Length = 484
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 194/389 (49%), Gaps = 14/389 (3%)
Query: 100 HYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEE 159
H LV ++H K + AL FRW +EH+ E + +++ILG+ +++ R +L +
Sbjct: 12 HELVYNVLHSSKTS-EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLD 70
Query: 160 M-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
M KG + ++ + G +++V+ F ++ G+E+ ++ N L + + G+
Sbjct: 71 MPKKGLEWDEDMWVMMIDSYGKZGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGR 130
Query: 219 VELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
+A+ F + L I P HTFN+ I G+ +V+ A ++MK P V++Y+T
Sbjct: 131 YMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNT 190
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+I Y R + + EM+ + P VVTYTT++ ++A+R+ E+MK G
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFG 250
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP-DTSTFNTMITMFSHHGHHEK 396
KP++ ++ L+ L A ++ EA + + EM + +AP D S F +I+ G+ +
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMSEARVILK-EMMDKYLAPTDNSIFMRLISSHCKSGNLDA 309
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK-------HHLSL 449
A VL+ M +L + L+++ K G+ D+ + +LLD ++ K L L
Sbjct: 310 AADVLKAMXRLS-VPTEAGHYGVLIENFCKXGQYDKAV-KLLDKLIEKDIILRPQSTLHL 367
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMI 478
+ + Y +I LC + A L ++++
Sbjct: 368 EPSAYNPMIEYLCNNGQAAKAETLVRQLL 396
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 133/311 (42%), Gaps = 4/311 (1%)
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQ 257
E N ET +++ L + K+ AR + L++ K + + + + I + K V E+
Sbjct: 41 FEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKZGIVQESV 100
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
Q+M+ G + SY+ + + R+ + ++M ++G P T+ ++
Sbjct: 101 KMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGF 160
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
SG E A R E MK PD +N +I R +++EA Y VEM + P
Sbjct: 161 FLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEK-YFVEMKGRNIEPT 219
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
T+ T+I + + A ++EEM KPN T+ LL K E +
Sbjct: 220 VVTYTTLIKGYVSVDQVDDALRLVEEMKGF-GIKPNAITYSTLLPGLCNAEKMSEA-RVI 277
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVK 497
L +M++K+ D + + +I C++ + A + K M + ++++
Sbjct: 278 LKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMXRLSVPTEAGHYGVLIENFC 337
Query: 498 QKHMYDAAEKI 508
+ YD A K+
Sbjct: 338 KXGQYDKAVKL 348
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 126/267 (47%), Gaps = 6/267 (2%)
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
+ ++++ A+ + +M G + +I SY +Z + ++ +M+ G +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKZGIVQESVKMFQKMEELGVERTIK 116
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
+Y + + + G + A R KM G +P FN +I+ + +V+ A ++ +
Sbjct: 117 SYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFE-D 175
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M ++PD T+NTMI + E+A EM K + +P V T+ L+K
Sbjct: 176 MKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEM-KGRNIEPTVVTYTTLIKGYVSVD 234
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ D+ L +L+++M + + TY+ ++ GLC A K A ++ KEM+ + P +
Sbjct: 235 QVDDAL-RLVEEM-KGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNS 292
Query: 489 C--RLILDEVKQKHMYDAAEKIEAVMK 513
RLI K ++ AA+ ++A+ +
Sbjct: 293 IFMRLISSHCKSGNLDAAADVLKAMXR 319
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 5/205 (2%)
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N T+ ++ L ++ A I M G + D + +I + G+ VQE+V ++
Sbjct: 44 NRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKZGIVQESVKMF 103
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
Q +M E GV ++N + + G + A +M E +P TF+ ++ F
Sbjct: 104 Q-KMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLS-EGIEPTRHTFNVMIWGFF 161
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
+GK E ++ +DM ++ +S D+ TY +I+G R K E A F EM G +I P
Sbjct: 162 LSGKV-ETANRFFEDMKSRE-ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPT 219
Query: 486 YQT-CRLILDEVKQKHMYDAAEKIE 509
T LI V + DA +E
Sbjct: 220 VVTYTTLIKGYVSVDQVDDALRLVE 244
>gi|255660868|gb|ACU25603.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
Length = 484
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 194/390 (49%), Gaps = 16/390 (4%)
Query: 100 HYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEE 159
H LV ++H K + AL FRW +EH+ E + +++ILG+ +++ R +L +
Sbjct: 12 HELVYNVLHSSKTS-EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLD 70
Query: 160 M-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
M KG + ++ + G +++V+ F ++ G+E+ ++ N L + + G+
Sbjct: 71 MPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGR 130
Query: 219 VELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
+A+ F + L I P HTFN+ I G+ +V+ A ++MK P V++Y+T
Sbjct: 131 YMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNT 190
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+I Y R + + EM+ + P VVTYTT++ ++A+R+ E+MK G
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFG 250
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP-DTSTFNTMITMFSHHGHHEK 396
KP++ ++ L+ L A ++ EA + + EM + +AP D S F +I+ G+ +
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMSEARVILK-EMMDKYLAPTDNSIFMRLISSHCKSGNLDA 309
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCF-KTGKTDECLSQLLDDMVNK-------HHLS 448
A VL+ M +L P + LL F K G+ D+ + +LLD ++ K L
Sbjct: 310 AADVLKAMIRL--SVPTEAGHYGLLIENFCKAGQYDKAV-KLLDKLIEKDIILRPQSTLH 366
Query: 449 LDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
L+ + Y +I LC + A L ++++
Sbjct: 367 LEPSAYNPMIEYLCNNGQASKAETLVRQLM 396
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 134/311 (43%), Gaps = 4/311 (1%)
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQ 257
E N ET +++ L + K+ AR + L++ K + + + + I + K V E+
Sbjct: 41 FEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESV 100
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
Q+M+ G + SY+ + + R+ + ++M ++G P T+ ++
Sbjct: 101 KMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGF 160
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
SG E A R E MK PD +N +I R +++EA Y VEM + P
Sbjct: 161 FLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEK-YFVEMKGRNIEPT 219
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
T+ T+I + + A ++EEM KPN T+ LL K E +
Sbjct: 220 VVTYTTLIKGYVSVDQVDDALRLVEEMKGF-GIKPNAITYSTLLPGLCNAEKMSEA-RVI 277
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVK 497
L +M++K+ D + + +I C++ + A + K MI + L+++
Sbjct: 278 LKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGLLIENFC 337
Query: 498 QKHMYDAAEKI 508
+ YD A K+
Sbjct: 338 KAGQYDKAVKL 348
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 127/267 (47%), Gaps = 6/267 (2%)
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
+ ++++ A+ + +M G + +I SY ++ + ++ +M+ G +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIK 116
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
+Y + + + G + A R KM G +P FN +I+ + +V+ A ++ +
Sbjct: 117 SYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFE-D 175
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M ++PD T+NTMI + E+A EM K + +P V T+ L+K
Sbjct: 176 MKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEM-KGRNIEPTVVTYTTLIKGYVSVD 234
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ D+ L +L+++M + + TY+ ++ GLC A K A ++ KEM+ + P +
Sbjct: 235 QVDDAL-RLVEEM-KGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNS 292
Query: 489 C--RLILDEVKQKHMYDAAEKIEAVMK 513
RLI K ++ AA+ ++A+++
Sbjct: 293 IFMRLISSHCKSGNLDAAADVLKAMIR 319
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 5/205 (2%)
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N T+ ++ L ++ A I M G + D + +I + G+ VQE+V ++
Sbjct: 44 NRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMF 103
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
Q +M E GV ++N + + G + A +M E +P TF+ ++ F
Sbjct: 104 Q-KMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLS-EGIEPTRHTFNVMIWGFF 161
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
+GK E ++ +DM ++ +S D+ TY +I+G R K E A F EM G +I P
Sbjct: 162 LSGKV-ETANRFFEDMKSRE-ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPT 219
Query: 486 YQT-CRLILDEVKQKHMYDAAEKIE 509
T LI V + DA +E
Sbjct: 220 VVTYTTLIKGYVSVDQVDDALRLVE 244
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 125/468 (26%), Positives = 207/468 (44%), Gaps = 64/468 (13%)
Query: 106 LIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEE------ 159
++ K+D++ L F WA C + S E ++ I + + R L+++
Sbjct: 100 VLMNIKNDYRLVLSFFEWA--CLRRDPSLEARCIVAQIATASKDLKMARKLIQDFWVNPN 157
Query: 160 ----MSKGHIV-----TLNTIAKVMRRFS-------GAGQWEDAVRTFDELGTFGLEKNT 203
+S GH V T R F AG ++A + FD++ +GL +
Sbjct: 158 LDVGVSFGHFVEQLIYTYKDWGSDPRVFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISV 217
Query: 204 ETMNLLLDTLCKE-GKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQ 261
++ NL + L ++ +++A VF+E + N ++NI H C++ RV EA +
Sbjct: 218 DSCNLFISHLSEDLDGIKIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLL 277
Query: 262 EMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSG 321
+M+ GC P VISYST+I YC+ +V +L++EMQ +G PN TY V+ L K+G
Sbjct: 278 QMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTG 337
Query: 322 DFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTF 381
EA R+ +M G PD + LI + V A ++ EM + ++PD T+
Sbjct: 338 KVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFD-EMQKRKISPDFITY 396
Query: 382 NTMITMFSHHGHHEKAFHVLEEM--NKLE------------HCK---------------- 411
+I G +A + EM +LE +CK
Sbjct: 397 TAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQ 456
Query: 412 ----PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKC 467
PN+ T+ L K G+ D ++LL +M K L L+I TY +++GLC+A
Sbjct: 457 MGLTPNIVTYTALADGLCKCGEVDTA-NELLHEMCRK-GLELNIYTYNSLVNGLCKAGNI 514
Query: 468 EWAYLLFKEMIGHDITPRYQTCRLILDE-VKQKHMYDAAEKIEAVMKK 514
+ A L K+M P T ++D K + M A E + ++ +
Sbjct: 515 DQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDR 562
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 181/391 (46%), Gaps = 11/391 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTI-AKVMRRFSGAGQWEDA 187
G + + Y ++ +L K ++ + +L EM I I ++ F G A
Sbjct: 318 GLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSA 377
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC--IPPNAHTFNIFIH 245
R FDE+ + + T ++ LC+ G+V A +F E+ C + P+ T+ I
Sbjct: 378 YRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEM-VCKRLEPDEVTYTALID 436
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G+CK ++ EA +M G P +++Y+ + C+ ELL EM +G
Sbjct: 437 GYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLEL 496
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N+ TY ++++ L K+G+ ++A+++ + M++ G PD+ + L+ ++ + A +
Sbjct: 497 NIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELL 556
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS-C 424
+ +M + + P TFN ++ F G E +L+ M + + PN T++ L+K C
Sbjct: 557 R-QMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLE-KGIMPNATTYNSLIKQYC 614
Query: 425 FKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
+ +++ M K + D TY ++I G C+A + A+ L ++M+G
Sbjct: 615 IRNNM--RATTEIYRGMCAKGVVP-DGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNL 671
Query: 485 RYQTCR-LILDEVKQKHMYDAAEKIEAVMKK 514
+ LI K+K +A E E + ++
Sbjct: 672 TVSSYNALIKGFYKRKKFLEARELFEQMRRE 702
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 120/276 (43%), Gaps = 5/276 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y + D L K ++D LL EM KG + + T ++ AG + AV+ ++
Sbjct: 466 YTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDME 525
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVD 254
G + T L+D CK ++ A + + L + P TFN+ ++G+C ++
Sbjct: 526 VAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLE 585
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
+ + ++ M G P +Y+++I+ YC + N E+ M A+G P+ TY ++
Sbjct: 586 DGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILI 645
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
K+ + +EA + M G +N LI + + EA +++ +M G+
Sbjct: 646 KGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFE-QMRREGL 704
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHC 410
D +N + G E + +E +E C
Sbjct: 705 VADREIYNIFADINYDEGKMELTLELCDE--AIEKC 738
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 170/342 (49%), Gaps = 7/342 (2%)
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK-EGKVEL-ARSVFLEL-K 230
+++ +S + AV T + + G + N +LD + + G V+L A V+ E+ +
Sbjct: 148 MVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIR 207
Query: 231 SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSK 290
S + PN +T+NI I G+C + + + EM+ +GC P V++Y+T+I +YC+ +
Sbjct: 208 SRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDE 267
Query: 291 VYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIY 350
+ LL M ++G PN+++Y +++ L + G +EA I E+M G PD +N L+
Sbjct: 268 AFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLN 327
Query: 351 TLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHC 410
+ +A+ V EM NGV+P T+ +I + +A ++M ++
Sbjct: 328 GYCKEGNFHQAL-VIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQM-RIRGL 385
Query: 411 KPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWA 470
+PN +T+ L+ + G +E ++L++M + S + TY IHG C + E A
Sbjct: 386 RPNERTYTTLIDGFSRQGLLNEAY-RILNEMT-ESGFSPSVVTYNAFIHGHCVLERMEEA 443
Query: 471 YLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
+ +EM+ + P + I+ +K D A +++ M
Sbjct: 444 LGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEM 485
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 112/447 (25%), Positives = 202/447 (45%), Gaps = 25/447 (5%)
Query: 81 DEVFQSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYE 138
DE F LK +QP+ N +I+ + K A I G G+ Y
Sbjct: 266 DEAFGLLKS-MSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGY-KGFTPDEVTYN 323
Query: 139 MMVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDAVRTFDELGTF 197
+++ K Q + EM + + ++ T ++ A A+ FD++
Sbjct: 324 TLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIR 383
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEA 256
GL N T L+D ++G + A + E+ +S P+ T+N FIHG C + R++EA
Sbjct: 384 GLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEA 443
Query: 257 QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSY 316
+QEM G P V+SYSTII +CR+ + +++ EM +G P+ VTY++++
Sbjct: 444 LGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQG 503
Query: 317 LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
L + EA ++++M +G PD + LI + +A++++ EM G P
Sbjct: 504 LCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHD-EMIHKGFLP 562
Query: 377 DTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC----FKT----- 427
D T++ +I + +A +L ++ E P+ T+ L+++C FK+
Sbjct: 563 DAVTYSVLINGLNKQARTREAKRLLFKL-IYEESVPSDVTYDTLIENCSNIEFKSVVALI 621
Query: 428 ------GKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHD 481
G E ++ + MV ++H + Y ++IHG CR A+ L+KEMI
Sbjct: 622 KGFCMKGLMHEA-DRVFESMVERNHKPGE-AVYNVIIHGHCRGGNLPKAFNLYKEMIHSG 679
Query: 482 ITPRYQTCRLILDEVKQKHMYDAAEKI 508
P T ++ + ++ M + ++
Sbjct: 680 FVPHTVTVITLIKALFKEGMNEEMSEV 706
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 132/275 (48%), Gaps = 6/275 (2%)
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY--E 293
++ F++ + + +N +D+A TI K G P V+SY++++ + R K+ E
Sbjct: 141 SSAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEE 200
Query: 294 LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLG 353
+ EM PNV TY ++ G+ ++ + +M+ G P+ +N LI
Sbjct: 201 VYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYC 260
Query: 354 RASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPN 413
+ R+ EA + + M G+ P+ ++N +I G ++A+ +LEEM + P+
Sbjct: 261 KMGRIDEAFGLLK-SMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMG-YKGFTPD 318
Query: 414 VQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLL 473
T++ LL K G + L + +MV ++ +S + TYT +I+ +C+A A
Sbjct: 319 EVTYNTLLNGYCKEGNFHQALV-IHAEMV-RNGVSPSVVTYTALINSMCKARNLNRAMEF 376
Query: 474 FKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
F +M + P +T ++D ++ + + A +I
Sbjct: 377 FDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRI 411
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 152/370 (41%), Gaps = 68/370 (18%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKG----HIVTLNTIAK---VMRRFSGA 181
G + Y ++D + +++ +L EM++ +VT N V+ R
Sbjct: 384 GLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERM--- 440
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTF 240
E+A+ E+ GL + + + ++ C++G+++ A + E+ + + P+A T+
Sbjct: 441 ---EEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTY 497
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
+ I G C++ R+ EA QEM G P +Y+T+I +YC + + +K L DEM
Sbjct: 498 SSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIH 557
Query: 301 QGCPPNVVTYTTVMSYLAKS---------------------------------------- 320
+G P+ VTY+ +++ L K
Sbjct: 558 KGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSV 617
Query: 321 ----------GDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
G EA R+ E M KP +N +I+ R + +A +Y+ EM
Sbjct: 618 VALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYK-EMI 676
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPN-VQTFHPLLKSCFKTGK 429
+G P T T T+I G +E+ V+ + L C+ N + L++ K G
Sbjct: 677 HSGFVPHTVTVITLIKALFKEGMNEEMSEVIGD--TLRSCRLNEAELAKVLVEINHKEGN 734
Query: 430 TDECLSQLLD 439
+ L+ L D
Sbjct: 735 MEAVLNVLTD 744
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 182/398 (45%), Gaps = 17/398 (4%)
Query: 94 NAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMD 151
+ +QP+ ++ D SAL + R + IY ++D L K +
Sbjct: 213 DGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHS 272
Query: 152 QMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLL 210
+ L EM KG L T ++ F +G+W DA + E+ + + T N L+
Sbjct: 273 DAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALI 332
Query: 211 DTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCH 269
+ KEGK A ++ E L I PN T++ I G+CK NR+D A+ M GC
Sbjct: 333 NAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCS 392
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI 329
P +I+++T+I YC ELL EM G + TY T++ GD A+ +
Sbjct: 393 PNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDL 452
Query: 330 TEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM----------PENGVAPDTS 379
++M G PD + L+ L ++++A+ +++V P NGV PD
Sbjct: 453 LQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQ 512
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLD 439
T+N +I+ + G +A + EEM P+ T+ ++ K + DE +Q+ D
Sbjct: 513 TYNILISGLINEGKFLEAEELYEEMPH-RGIVPDTITYSSMIDGLCKQSRLDEA-TQMFD 570
Query: 440 DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
M +K S ++ T+T +I+G C+A + + LF EM
Sbjct: 571 SMGSK-SFSPNVVTFTTLINGYCKAGRVDDGLELFCEM 607
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 113/439 (25%), Positives = 201/439 (45%), Gaps = 26/439 (5%)
Query: 95 AIQPSHYLVNKLIHRF--KDDWKSALGIF--RWAGSCPGYEHSSEIYEMMVDILGKVRQM 150
+ P N L+H +D AL +F + +C + + +++ L + ++
Sbjct: 144 GLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTC---RPNVVTFTTLMNGLCREGRI 200
Query: 151 DQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETM 206
+ ALL+ M + + +T TI M + D +R +E+ + N
Sbjct: 201 VEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISH--IIPNVVIY 258
Query: 207 NLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKG 265
+ ++D+LCK+G+ A+++F E++ I P+ T+N I G+C R +A+ +QEM
Sbjct: 259 SAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLE 318
Query: 266 HGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEE 325
P V++Y+ +I ++ ++ F + EL DEM +G PN +TY++++ K +
Sbjct: 319 RKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDA 378
Query: 326 AIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMI 385
A + M G P+ FN LI A R+ + + + EM E G+ DT+T+NT+I
Sbjct: 379 AEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLH-EMTETGLVADTTTYNTLI 437
Query: 386 TMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL-------- 437
F G A +L+EM C P++ T LL GK + L
Sbjct: 438 HGFYLVGDLNAALDLLQEMISSGLC-PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496
Query: 438 -LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV 496
LD + + D+ TY ++I GL K A L++EM I P T ++D +
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556
Query: 497 -KQKHMYDAAEKIEAVMKK 514
KQ + +A + +++ K
Sbjct: 557 CKQSRLDEATQMFDSMGSK 575
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/412 (25%), Positives = 185/412 (44%), Gaps = 40/412 (9%)
Query: 140 MVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
++ ++ ++ + D + +L ++M + I + + +++ F + A+ TF ++ G
Sbjct: 85 LMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLG 144
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQ 257
L + T N LL LC E +V A ++F ++ ++ PN TF ++G C+ R+ EA
Sbjct: 145 LHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAV 204
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG-CPPNVVTYTTVMSY 316
+ M G P I+Y TI+ C+ + +LL +M+ PNVV Y+ ++
Sbjct: 205 ALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDS 264
Query: 317 LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
L K G +A + +M+ G PD +N +I + R +A + Q EM E ++P
Sbjct: 265 LCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQ-EMLERKISP 323
Query: 377 DTSTFNTMITMFSHHGHHEKAFHVLEEM----------------------NKL---EH-- 409
D T+N +I F G +A + +EM N+L EH
Sbjct: 324 DVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMF 383
Query: 410 -------CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC 462
C PN+ TF+ L+ + D+ + +LL +M + L D TTY +IHG
Sbjct: 384 YLMATKGCSPNLITFNTLIDGYCGAKRIDDGM-ELLHEM-TETGLVADTTTYNTLIHGFY 441
Query: 463 RANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
A L +EMI + P TC +LD + A ++ VM+K
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQK 493
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 155/313 (49%), Gaps = 12/313 (3%)
Query: 205 TMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
+ +L+ C K+ A S F ++ K + P+ TFN +HG C +RV EA +M
Sbjct: 116 SFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQM 175
Query: 264 KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF 323
C P V++++T++ CR+ + LLD M G P +TY T++ + K GD
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDT 235
Query: 324 EEAIRITEKM-KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFN 382
A+ + KM +I P+ ++ +I +L + R +A ++ EM E G+ PD T+N
Sbjct: 236 VSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLF-TEMQEKGIFPDLFTYN 294
Query: 383 TMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMV 442
+MI F G A +L+EM + P+V T++ L+ + K GK E +L D+M+
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEMLE-RKISPDVVTYNALINAFVKEGKFFEA-EELYDEML 352
Query: 443 NKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMY 502
+ + + TY+ +I G C+ N+ + A +F M +P T ++D Y
Sbjct: 353 PRGIIP-NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDG------Y 405
Query: 503 DAAEKIEAVMKKL 515
A++I+ M+ L
Sbjct: 406 CGAKRIDDGMELL 418
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 175/385 (45%), Gaps = 19/385 (4%)
Query: 38 SSPIESYCSDGARLDHHQVL--CVDSPRLPDIDVIISKVHVGSSEDEVFQS--LKQDHVC 93
+S I +CS G D Q+L ++ PD+ + ++ E + F++ L + +
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353
Query: 94 NAIQPSHYLVNKLIHRF-KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQ 152
I P+ + +I F K + A + + G + + ++D +++D
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDD 413
Query: 153 MRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLD 211
LL EM++ G + T ++ F G A+ E+ + GL + T + LLD
Sbjct: 414 GMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLD 473
Query: 212 TLCKEGKVELARSVFLELK------------SCIPPNAHTFNIFIHGWCKINRVDEAQWT 259
LC GK++ A +F ++ + + P+ T+NI I G + EA+
Sbjct: 474 GLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEEL 533
Query: 260 IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK 319
+EM G P I+YS++I C+Q + ++ D M ++ PNVVT+TT+++ K
Sbjct: 534 YEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCK 593
Query: 320 SGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTS 379
+G ++ + + +M G ++ + LI + + A+ ++Q EM +GV PDT
Sbjct: 594 AGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQ-EMISSGVYPDTI 652
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEM 404
T M+T ++A +LE++
Sbjct: 653 TIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 116/247 (46%), Gaps = 16/247 (6%)
Query: 104 NKLIHRFK--DDWKSALGIFR---WAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLE 158
N LIH F D +AL + + +G CP + + + D GK++ +M +++
Sbjct: 434 NTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDN-GKLKDALEMFKVMQ 492
Query: 159 EMSK---------GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLL 209
+ K G + T ++ G++ +A ++E+ G+ +T T + +
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552
Query: 210 LDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGC 268
+D LCK+ +++ A +F + S PN TF I+G+CK RVD+ EM G
Sbjct: 553 IDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGI 612
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
I+Y T+I + + N + ++ EM + G P+ +T +++ L + + A+
Sbjct: 613 VANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVA 672
Query: 329 ITEKMKI 335
+ EK+++
Sbjct: 673 MLEKLQM 679
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/304 (20%), Positives = 122/304 (40%), Gaps = 37/304 (12%)
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G+ +I +++A +M P V+ + ++ R V L +M+ +
Sbjct: 53 GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
++ ++T ++ A+ K+ +G PD FN L++ L RV EA+ ++
Sbjct: 113 DIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLF 172
Query: 366 Q---------------------------VE-------MPENGVAPDTSTFNTMITMFSHH 391
VE M E+G+ P T+ T++
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKI 232
Query: 392 GHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDI 451
G A +L +M ++ H PNV + ++ S K G+ + L +M K D+
Sbjct: 233 GDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDA-QNLFTEMQEKGIFP-DL 290
Query: 452 TTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE-VKQKHMYDAAEKIEA 510
TY +I G C + + A L +EM+ I+P T +++ VK+ ++A E +
Sbjct: 291 FTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDE 350
Query: 511 VMKK 514
++ +
Sbjct: 351 MLPR 354
>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 125/520 (24%), Positives = 222/520 (42%), Gaps = 57/520 (10%)
Query: 35 IVSSSPIESYCSDGARLDHHQVLCVDSPRL---PDI---DVIISKV----HVGSSEDEVF 84
I+++ +E +C + +L +P L PD+ +++ + G ++D +
Sbjct: 147 IIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLR 206
Query: 85 QSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVD 142
+ VC+ P+ N +I F + D A +F+ G Y +V
Sbjct: 207 MMAEGGAVCS---PNVVAYNTVIDGFFKEGDVNKACDLFKEMVQ-RGIPPDLVTYNSVVH 262
Query: 143 ILGKVRQMDQMRALLEEMSKGHIVTLN-TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEK 201
L K R MD+ A L +M ++ N T ++ +S GQW++AVR F E+ +
Sbjct: 263 ALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILP 322
Query: 202 NTETMNLLLDTLCKEGKVELARSVF----------------------------------- 226
+ T+++L+ +LCK GK++ AR VF
Sbjct: 323 DVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLF 382
Query: 227 -LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQ 285
L L I P+ +TFN+ I + +D+A EM+ HG P V++Y T+I + CR
Sbjct: 383 DLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRI 442
Query: 286 YNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFF 345
E ++M QG P+ Y ++ G +A + ++ G D FF
Sbjct: 443 GKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFF 502
Query: 346 NCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMN 405
+ +I L + RV +A ++ + + G+ PD ++ ++ + G EKA V + M
Sbjct: 503 SSIINNLCKLGRVMDAQNIFDLTV-NVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMV 561
Query: 406 KLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRAN 465
+PNV + L+ K G+ DE LS L +M+ + + Y+++I GL +A
Sbjct: 562 S-AGIEPNVVVYCTLVNGYCKIGRIDEGLS-LFREMLQR-GIKPSTILYSIIIDGLFQAG 618
Query: 466 KCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
+ A + F EM I T ++L + + +D A
Sbjct: 619 RTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEA 658
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 143/311 (45%), Gaps = 8/311 (2%)
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEA- 256
L + T +L+D + + ELA + F +L ++ + N N + G+C+ R DEA
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 166
Query: 257 QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG--CPPNVVTYTTVM 314
+ GC P V SYS +++S C Q + +LL M G C PNVV Y TV+
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 226
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
K GD +A + ++M G PD +N +++ L +A R + + +M V
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKA-RAMDKAEAFLRQMVNKRV 285
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
P+ T+N +I +S G ++A V +EM + P+V T L+ S K GK E
Sbjct: 286 LPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRR-HSILPDVVTLSMLMGSLCKYGKIKEA- 343
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
+ D M K + D+ +Y ++++G LF M+G I P + T +++
Sbjct: 344 RDVFDTMAMKGQ-NPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIK 402
Query: 495 EVKQKHMYDAA 505
M D A
Sbjct: 403 AYANCGMLDKA 413
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 173/388 (44%), Gaps = 48/388 (12%)
Query: 167 TLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF 226
T +T A +M + A + E A+ F +L GL N N LL+ C+ + + A +
Sbjct: 110 TSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDIL 169
Query: 227 L----ELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG--CHPCVISYSTIIQ 280
L EL C+P + +++I + C + +A ++ M G C P V++Y+T+I
Sbjct: 170 LHRTPEL-GCVP-DVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVID 227
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKS-------------------- 320
+ ++ + +K +L EM +G PP++VTY +V+ L K+
Sbjct: 228 GFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLP 287
Query: 321 ---------------GDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
G ++EA+R+ ++M+ PD + L+ +L + +++EA V+
Sbjct: 288 NNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVF 347
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
M G PD ++N M+ ++ G + + M + P+ TF+ L+K+
Sbjct: 348 DT-MAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLG-DGIAPDFYTFNVLIKAYA 405
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP- 484
G D+ + ++ + + H + D+ TY VI LCR K + A F +MI + P
Sbjct: 406 NCGMLDKAM--IIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPD 463
Query: 485 RYQTCRLILDEVKQKHMYDAAEKIEAVM 512
+Y LI + A E I +M
Sbjct: 464 KYAYNCLIQGFCTHGSLLKAKELISEIM 491
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/411 (19%), Positives = 172/411 (41%), Gaps = 44/411 (10%)
Query: 94 NAIQPSHYLVNKLIHRFKD--DWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMD 151
+ I P Y N LI + + A+ IF G + Y ++ L ++ +MD
Sbjct: 388 DGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRD-HGVKPDVVTYRTVIAALCRIGKMD 446
Query: 152 Q-MRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLL 210
M + + +G +++ F G A E+ G+ + + ++
Sbjct: 447 DAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSII 506
Query: 211 DTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCH 269
+ LCK G+V A+++F L + + P+A +++ + G+C + ++++A M G
Sbjct: 507 NNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIE 566
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI 329
P V+ Y T++ YC+ + L EM +G P+ + Y+ ++ G F+ +
Sbjct: 567 PNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIII-----DGLFQAGRTV 621
Query: 330 TEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFS 389
K+K EM E+G+A D T+N ++
Sbjct: 622 PAKVKF-------------------------------HEMTESGIAMDICTYNIVLRGLF 650
Query: 390 HHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSL 449
+ ++A + +E+ + + K N+ T + ++ F+T + +E ++ L +++ L
Sbjct: 651 KNRCFDEAIFLFKELRAM-NVKINIITLNTMIDGMFQTRRVEE--AKDLFASISRSRLVP 707
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKH 500
+ TY+++I L + E A +F M P + ++ E+ +K+
Sbjct: 708 SVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKN 758
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 126/266 (47%), Gaps = 3/266 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G + +Y M++D V +M++ + + M S G + ++ + G+ ++
Sbjct: 529 GLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEG 588
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHG 246
+ F E+ G++ +T ++++D L + G+ A+ F E+ +S I + T+NI + G
Sbjct: 589 LSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRG 648
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
K DEA + +E++ +I+ +T+I + + +L + P+
Sbjct: 649 LFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPS 708
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
VVTY+ +++ L K G EEA + M+ G +P+SR N ++ L + + + A Y
Sbjct: 709 VVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRA-GAYL 767
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHG 392
++ E + + T ++ +FS G
Sbjct: 768 SKIDERNFSLEHLTTMLLVDLFSSKG 793
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 93/243 (38%), Gaps = 50/243 (20%)
Query: 290 KVYELLDEMQAQGCP------------------------------------------PNV 307
+ ++LLDE+Q +G P P V
Sbjct: 47 EAHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSGPALAVALFNRAASRAQGPRV 106
Query: 308 V-----TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
+ TY +M ++ E A+ ++ G + + N L+ A R EA+
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 166
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH-CKPNVQTFHPLL 421
+ PE G PD +++ ++ G +A +L M + C PNV ++ ++
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 226
Query: 422 KSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHD 481
FK G ++ L +MV + + D+ TY V+H LC+A + A ++M+
Sbjct: 227 DGFFKEGDVNKA-CDLFKEMVQR-GIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKR 284
Query: 482 ITP 484
+ P
Sbjct: 285 VLP 287
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 113/246 (45%), Gaps = 19/246 (7%)
Query: 38 SSPIESYCSDGARLDHHQV--LCVDSPRLPDIDVIISKVH-----VGSSED--EVFQSLK 88
SS I + C G +D + L V+ PD V+ S + VG E VF ++
Sbjct: 503 SSIINNLCKLGRVMDAQNIFDLTVNVGLHPDA-VVYSMLMDGYCLVGKMEKALRVFDAM- 560
Query: 89 QDHVCNAIQPSHYLVNKLIHRFKDDWK--SALGIFRWAGSCPGYEHSSEIYEMMVDILGK 146
V I+P+ + L++ + + L +FR G + S+ +Y +++D L +
Sbjct: 561 ---VSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQ-RGIKPSTILYSIIIDGLFQ 616
Query: 147 VRQMDQMRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTET 205
+ + EM++ I + + T V+R +++A+ F EL ++ N T
Sbjct: 617 AGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIIT 676
Query: 206 MNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
+N ++D + + +VE A+ +F + +S + P+ T++I I K V+EA+ M+
Sbjct: 677 LNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQ 736
Query: 265 GHGCHP 270
GC P
Sbjct: 737 NAGCEP 742
>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 125/520 (24%), Positives = 222/520 (42%), Gaps = 57/520 (10%)
Query: 35 IVSSSPIESYCSDGARLDHHQVLCVDSPRL---PDI---DVIISKV----HVGSSEDEVF 84
I+++ +E +C + +L +P L PD+ +++ + G ++D +
Sbjct: 160 IIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLR 219
Query: 85 QSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVD 142
+ VC+ P+ N +I F + D A +F+ G Y +V
Sbjct: 220 MMAEGGAVCS---PNVVAYNTVIDGFFKEGDVNKACDLFKEMVQ-RGIPPDLVTYNSVVH 275
Query: 143 ILGKVRQMDQMRALLEEMSKGHIVTLN-TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEK 201
L K R MD+ A L +M ++ N T ++ +S GQW++AVR F E+ +
Sbjct: 276 ALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILP 335
Query: 202 NTETMNLLLDTLCKEGKVELARSVF----------------------------------- 226
+ T+++L+ +LCK GK++ AR VF
Sbjct: 336 DVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLF 395
Query: 227 -LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQ 285
L L I P+ +TFN+ I + +D+A EM+ HG P V++Y T+I + CR
Sbjct: 396 DLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRI 455
Query: 286 YNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFF 345
E ++M QG P+ Y ++ G +A + ++ G D FF
Sbjct: 456 GKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFF 515
Query: 346 NCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMN 405
+ +I L + RV +A ++ + + G+ PD ++ ++ + G EKA V + M
Sbjct: 516 SSIINNLCKLGRVMDAQNIFDLTV-NVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMV 574
Query: 406 KLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRAN 465
+PNV + L+ K G+ DE LS L +M+ + + Y+++I GL +A
Sbjct: 575 S-AGIEPNVVVYCTLVNGYCKIGRIDEGLS-LFREMLQR-GIKPSTILYSIIIDGLFQAG 631
Query: 466 KCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
+ A + F EM I T ++L + + +D A
Sbjct: 632 RTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEA 671
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 143/311 (45%), Gaps = 8/311 (2%)
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEA- 256
L + T +L+D + + ELA + F +L ++ + N N + G+C+ R DEA
Sbjct: 120 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 179
Query: 257 QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG--CPPNVVTYTTVM 314
+ GC P V SYS +++S C Q + +LL M G C PNVV Y TV+
Sbjct: 180 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 239
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
K GD +A + ++M G PD +N +++ L +A R + + +M V
Sbjct: 240 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKA-RAMDKAEAFLRQMVNKRV 298
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
P+ T+N +I +S G ++A V +EM + P+V T L+ S K GK E
Sbjct: 299 LPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRR-HSILPDVVTLSMLMGSLCKYGKIKEA- 356
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
+ D M K + D+ +Y ++++G LF M+G I P + T +++
Sbjct: 357 RDVFDTMAMKGQ-NPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIK 415
Query: 495 EVKQKHMYDAA 505
M D A
Sbjct: 416 AYANCGMLDKA 426
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 173/388 (44%), Gaps = 48/388 (12%)
Query: 167 TLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF 226
T +T A +M + A + E A+ F +L GL N N LL+ C+ + + A +
Sbjct: 123 TSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDIL 182
Query: 227 L----ELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG--CHPCVISYSTIIQ 280
L EL C+P + +++I + C + +A ++ M G C P V++Y+T+I
Sbjct: 183 LHRTPEL-GCVP-DVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVID 240
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKS-------------------- 320
+ ++ + +K +L EM +G PP++VTY +V+ L K+
Sbjct: 241 GFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLP 300
Query: 321 ---------------GDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
G ++EA+R+ ++M+ PD + L+ +L + +++EA V+
Sbjct: 301 NNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVF 360
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
M G PD ++N M+ ++ G + + M + P+ TF+ L+K+
Sbjct: 361 DT-MAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLG-DGIAPDFYTFNVLIKAYA 418
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP- 484
G D+ + ++ + + H + D+ TY VI LCR K + A F +MI + P
Sbjct: 419 NCGMLDKAM--IIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPD 476
Query: 485 RYQTCRLILDEVKQKHMYDAAEKIEAVM 512
+Y LI + A E I +M
Sbjct: 477 KYAYNCLIQGFCTHGSLLKAKELISEIM 504
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/411 (19%), Positives = 173/411 (42%), Gaps = 44/411 (10%)
Query: 94 NAIQPSHYLVNKLIHRFKD--DWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMD 151
+ I P Y N LI + + A+ IF G + Y ++ L ++ +MD
Sbjct: 401 DGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRD-HGVKPDVVTYRTVIAALCRIGKMD 459
Query: 152 Q-MRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLL 210
M + + +G +++ F G A E+ G+ + + ++
Sbjct: 460 DAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSII 519
Query: 211 DTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCH 269
+ LCK G+V A+++F L + + P+A +++ + G+C + ++++A M G
Sbjct: 520 NNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIE 579
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI 329
P V+ Y T++ YC+ + L EM +G P+ + Y+ ++ G F+ +
Sbjct: 580 PNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIII-----DGLFQAGRTV 634
Query: 330 TEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFS 389
KMK EM E+G+A D T+N ++
Sbjct: 635 PAKMKF-------------------------------HEMTESGIAMDICTYNIVLRGLF 663
Query: 390 HHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSL 449
+ ++A + +E+ + + K N+ T + ++ F+T + +E ++ L +++ L
Sbjct: 664 KNRCFDEAIFLFKELRAM-NVKINIITLNTMIDGMFQTRRVEE--AKDLFASISRSRLVP 720
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKH 500
++ TY+++I L + E A +F M P + ++ E+ +K+
Sbjct: 721 NVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKN 771
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 126/266 (47%), Gaps = 3/266 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G + +Y M++D V +M++ + + M S G + ++ + G+ ++
Sbjct: 542 GLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEG 601
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHG 246
+ F E+ G++ +T ++++D L + G+ A+ F E+ +S I + T+NI + G
Sbjct: 602 LSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRG 661
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
K DEA + +E++ +I+ +T+I + + +L + PN
Sbjct: 662 LFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPN 721
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
VVTY+ +++ L K G EEA + M+ G +P+SR N ++ L + + + A Y
Sbjct: 722 VVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRA-GAYL 780
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHG 392
++ E + + T ++ +FS G
Sbjct: 781 SKIDERNFSLEHLTAMLLVDLFSSKG 806
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 93/243 (38%), Gaps = 50/243 (20%)
Query: 290 KVYELLDEMQAQGCP------------------------------------------PNV 307
+ ++LLDE+Q +G P P V
Sbjct: 60 EAHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSGPALAVALFNRAASRAQGPRV 119
Query: 308 V-----TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
+ TY +M ++ E A+ ++ G + + N L+ A R EA+
Sbjct: 120 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 179
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH-CKPNVQTFHPLL 421
+ PE G PD +++ ++ G +A +L M + C PNV ++ ++
Sbjct: 180 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 239
Query: 422 KSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHD 481
FK G ++ L +MV + + D+ TY V+H LC+A + A ++M+
Sbjct: 240 DGFFKEGDVNKA-CDLFKEMVQR-GIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKR 297
Query: 482 ITP 484
+ P
Sbjct: 298 VLP 300
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 133/304 (43%), Gaps = 19/304 (6%)
Query: 38 SSPIESYCSDGARLDHHQV--LCVDSPRLPDIDVIISKVH-----VGSSED--EVFQSLK 88
SS I + C G +D + L V+ PD V+ S + VG E VF ++
Sbjct: 516 SSIINNLCKLGRVMDAQNIFDLTVNVGLHPDA-VVYSMLMDGYCLVGKMEKALRVFDAM- 573
Query: 89 QDHVCNAIQPSHYLVNKLIHRFKDDWK--SALGIFRWAGSCPGYEHSSEIYEMMVDILGK 146
V I+P+ + L++ + + L +FR G + S+ +Y +++D L +
Sbjct: 574 ---VSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQ-RGIKPSTILYSIIIDGLFQ 629
Query: 147 VRQMDQMRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTET 205
+ + EM++ I + + T V+R +++A+ F EL ++ N T
Sbjct: 630 AGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIIT 689
Query: 206 MNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
+N ++D + + +VE A+ +F + +S + PN T++I I K V+EA+ M+
Sbjct: 690 LNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQ 749
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
GC P + +++ ++ + L ++ + +T ++ + G
Sbjct: 750 NAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCR 809
Query: 325 EAIR 328
E IR
Sbjct: 810 EQIR 813
>gi|413932624|gb|AFW67175.1| hypothetical protein ZEAMMB73_588183 [Zea mays]
Length = 520
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 114/432 (26%), Positives = 193/432 (44%), Gaps = 31/432 (7%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILG----KVRQMDQMRALL 157
LV ++HR + + K A F WA GY H Y ++DIL K RQ + +L
Sbjct: 79 LVADVLHRLRYEEKLAFRFFAWASQQDGYNHEPTTYNDIIDILSGTRYKSRQFGVLCNVL 138
Query: 158 EEMSK--GHIVTLNTIAKVMRRFSG---------AGQWEDAVRTFDELGTFGLEKNTETM 206
+ M + V + + +++R ++ A + +RT E T+ +
Sbjct: 139 DHMKRHGSRSVPVEDLLEILRAYTEKHLTHMRKLAKKRRVRMRTPPE---------TDAL 189
Query: 207 NLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
N+LLD CK G V+ A +VF +K + NA T++ GWC+ +A ++EM
Sbjct: 190 NVLLDAFCKCGMVKEAEAVFGRVKRKLLGNAETYSTLFFGWCRARDPKKAMKVLEEMIQM 249
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG---CPPNVVTYTTVMSYLAKSGDF 323
P +Y I S+C S+ EL + M+ +G P TY+ ++ LAK+
Sbjct: 250 KHTPESFTYVAAIISFCSAGLVSEARELFEFMRTEGLTISSPTAKTYSIMIVALAKADRM 309
Query: 324 EEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNT 383
EE + M+ G PD + LI + ++ +A Y EM G PD T+N
Sbjct: 310 EECFELLSDMRSCGCMPDVTTYKDLIEGMCLVGKL-DAAYRVLDEMGRAGFPPDIVTYNC 368
Query: 384 MITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVN 443
+ +F H + A + E M + HC+P+V T++ ++ F+ G+ L L+ ++
Sbjct: 369 FLNVFCSHRKADDALELCERMIE-AHCEPSVHTYNMMMMMFFEMGEAHRALDICLE--MD 425
Query: 444 KHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYD 503
K I TY ++I+GL + E+A L E+I D+ Y+ I+ +
Sbjct: 426 KRRCQRAIDTYEIMIYGLFDCGETEYATALLDEVINRDMKLSYKKFDAIMLRLSDVGNLG 485
Query: 504 AAEKIEAVMKKL 515
A ++ M+K
Sbjct: 486 AIHRLSEHMRKF 497
>gi|255660940|gb|ACU25639.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 484
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 101/389 (25%), Positives = 197/389 (50%), Gaps = 14/389 (3%)
Query: 100 HYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEE 159
H LV ++H K+ + AL FRW +EH+ E + +++ILG+ +++ R +L +
Sbjct: 12 HELVYNVLHSAKNS-EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLD 70
Query: 160 MSKGHIVTLNTIAKVM-RRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
M K + + +M + AG +++V+ F ++ G+E+ ++ + L + + G+
Sbjct: 71 MPKKGLEWDEDLWVLMIDSYGKAGIVQESVKMFQKMEELGVERTIKSYDALFKVILRRGR 130
Query: 219 VELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
+A+ F ++ S I P HTFN+ + G+ +V+ A ++MK P V++Y+T
Sbjct: 131 YMMAKRYFNKMLSEGIEPTRHTFNVMMWGFFLSGKVETANRFFEDMKSREIMPDVVTYNT 190
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
++ YCR + + EM+ + P VVTYTT++ ++A+R E+MK G
Sbjct: 191 MVNGYCRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDALRFVEEMKGFG 250
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP-DTSTFNTMITMFSHHGHHEK 396
KP++ ++ L+ L A ++ EA + + EM + +AP D S F +I+ G +
Sbjct: 251 MKPNAITYSTLLPGLCNAEKMSEARSILK-EMVDKYIAPTDNSIFMRLISGQCKAGDLDA 309
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK-------HHLSL 449
A +VL+ M +L + L+++ K G+ D+ + +LLD ++ K L +
Sbjct: 310 AANVLKAMIRLS-VPTEAGHYGVLIENYCKAGEYDKAI-KLLDKVIEKDIILRPQSTLHM 367
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMI 478
+ + Y +I LC + A L ++++
Sbjct: 368 ESSAYNPLIEYLCNNGQTAKAEALVRQLM 396
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 134/311 (43%), Gaps = 4/311 (1%)
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQ 257
E N ET +++ L + K+ AR + L++ K + + + + I + K V E+
Sbjct: 41 FEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDLWVLMIDSYGKAGIVQESV 100
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
Q+M+ G + SY + + R+ + ++M ++G P T+ +M
Sbjct: 101 KMFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMMWGF 160
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
SG E A R E MK PD +N ++ R +++EA Y VEM + P
Sbjct: 161 FLSGKVETANRFFEDMKSREIMPDVVTYNTMVNGYCRVKKMEEAEK-YFVEMKGRNIEPT 219
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
T+ T+I + + A +EEM KPN T+ LL K E S +
Sbjct: 220 VVTYTTLIKGYVSVDRVDDALRFVEEMKGF-GMKPNAITYSTLLPGLCNAEKMSEARS-I 277
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVK 497
L +MV+K+ D + + +I G C+A + A + K MI + ++++
Sbjct: 278 LKEMVDKYIAPTDNSIFMRLISGQCKAGDLDAAANVLKAMIRLSVPTEAGHYGVLIENYC 337
Query: 498 QKHMYDAAEKI 508
+ YD A K+
Sbjct: 338 KAGEYDKAIKL 348
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 122/267 (45%), Gaps = 6/267 (2%)
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
+ ++++ A+ + +M G + +I SY + + ++ +M+ G +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDLWVLMIDSYGKAGIVQESVKMFQKMEELGVERTIK 116
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
+Y + + + G + A R KM G +P FN +++ + +V+ A ++ +
Sbjct: 117 SYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMMWGFFLSGKVETANRFFE-D 175
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M + PD T+NTM+ + E+A EM K + +P V T+ L+K
Sbjct: 176 MKSREIMPDVVTYNTMVNGYCRVKKMEEAEKYFVEM-KGRNIEPTVVTYTTLIKGYVSVD 234
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ D+ L + +++M + + TY+ ++ GLC A K A + KEM+ I P +
Sbjct: 235 RVDDAL-RFVEEM-KGFGMKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYIAPTDNS 292
Query: 489 C--RLILDEVKQKHMYDAAEKIEAVMK 513
RLI + K + AA ++A+++
Sbjct: 293 IFMRLISGQCKAGDLDAAANVLKAMIR 319
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 123/294 (41%), Gaps = 46/294 (15%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y MV+ +V++M++ EM +I T+ T +++ + + +DA+R +E+
Sbjct: 188 YNTMVNGYCRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDALRFVEEMK 247
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRV 253
FG++ N T + LL LC K+ ARS+ E+ K P + F I G CK +
Sbjct: 248 GFGMKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYIAPTDNSIFMRLISGQCKAGDL 307
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC---PPNVV-- 308
D A ++ M Y +I++YC+ + K +LLD++ + P + +
Sbjct: 308 DAAANVLKAMIRLSVPTEAGHYGVLIENYCKAGEYDKAIKLLDKVIEKDIILRPQSTLHM 367
Query: 309 ---TYTTVMSYLAKSGDFEEAIRITEKMKIVG-----------------SKPDSRFFNCL 348
Y ++ YL +G +A + ++ +G PDS F L
Sbjct: 368 ESSAYNPLIEYLCNNGQTAKAEALVRQLMKLGVQDPTALNTLIRGHSQEGSPDSAF-ELL 426
Query: 349 IYTLGRASRVQEAVYVYQVE-----------------MPENGVAPDTSTFNTMI 385
L R +++ Y V+ M ENG PD+S F +++
Sbjct: 427 KIMLRRKVDSEQSAYDSLVQSYLKKNEPADAKAALDSMIENGHLPDSSLFRSVM 480
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 100/238 (42%), Gaps = 18/238 (7%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRFSG---AGQW 184
G + ++ Y ++ L +M + R++L+EM +I T N+I MR SG AG
Sbjct: 250 GMKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYIAPTDNSI--FMRLISGQCKAGDL 307
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELA---------RSVFLELKSCIPP 235
+ A + + +L++ CK G+ + A + + L +S +
Sbjct: 308 DAAANVLKAMIRLSVPTEAGHYGVLIENYCKAGEYDKAIKLLDKVIEKDIILRPQSTLHM 367
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCH-PCVISYSTIIQSYCRQYNFSKVYEL 294
+ +N I C + +A+ ++++ G P ++ T+I+ + ++ + +EL
Sbjct: 368 ESSAYNPLIEYLCNNGQTAKAEALVRQLMKLGVQDPTALN--TLIRGHSQEGSPDSAFEL 425
Query: 295 LDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
L M + Y +++ K + +A + M G PDS F ++ +L
Sbjct: 426 LKIMLRRKVDSEQSAYDSLVQSYLKKNEPADAKAALDSMIENGHLPDSSLFRSVMESL 483
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 195/418 (46%), Gaps = 47/418 (11%)
Query: 129 GYEHSSEIYEMMVDIL---GKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWE 185
GYE ++ + +++ L G+V + ++ + EM GH L TI ++ +G+
Sbjct: 251 GYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM--GHKPDLITINTLVNGLCLSGKEA 308
Query: 186 DAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF------------------- 226
+A+ D++ +G + N T +L+ +CK G+ LA +
Sbjct: 309 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 368
Query: 227 ------------------LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGC 268
+E+K I N T+NI I G+C R D+ +++M
Sbjct: 369 DGLCKHGSLDNAFNLFNEMEMKG-ITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKI 427
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
+P V+++S +I S+ ++ + EL EM +G P+ +TYT+++ K ++A +
Sbjct: 428 NPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQ 487
Query: 329 ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF 388
+ + M G P+ R FN LI +A+R+ + + +++ +M GV DT T+NT+I F
Sbjct: 488 MVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR-KMSLRGVVADTVTYNTLIQGF 546
Query: 389 SHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
G A + +EM PN+ T+ LL G++++ L + + K +
Sbjct: 547 CELGKLNVAKELFQEMVS-RKVPPNIVTYKILLDGLCDNGESEKALEIF--EKIEKSKME 603
Query: 449 LDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAE 506
LDI Y ++IHG+C A+K + A+ LF + + P +T +++ + +K AE
Sbjct: 604 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAE 661
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 167/363 (46%), Gaps = 43/363 (11%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +++D L K +D L EM KG + T ++ F AG+W+D + ++
Sbjct: 364 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 423
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-------------------------- 229
+ N T ++L+D+ KEGK+ A + E+
Sbjct: 424 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 483
Query: 230 -----------KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTI 278
K C PN TFNI I+G+CK NR+D+ ++M G ++Y+T+
Sbjct: 484 KANQMVDLMVSKGC-DPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTL 542
Query: 279 IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
IQ +C + EL EM ++ PPN+VTY ++ L +G+ E+A+ I EK++
Sbjct: 543 IQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKM 602
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
+ D +N +I+ + AS+V +A ++ +P GV P T+N MI G +A
Sbjct: 603 ELDIGIYNIIIHGMCNASKVDDAWDLF-CSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAE 661
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
+ +M + H P+ T++ L+++ G D S L + + + S+D +T +VI
Sbjct: 662 LLFRKMEEDGHA-PDGWTYNILIRA--HLGDGDATKSVKLIEELKRCGFSVDASTIKMVI 718
Query: 459 HGL 461
L
Sbjct: 719 DML 721
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 187/418 (44%), Gaps = 53/418 (12%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
+ + + K +Q D + AL ++M KG L T++ ++ F + A ++
Sbjct: 189 FSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKII 248
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCI-----PPNAHTFNIFIHGWCKI 250
G E NT T + L++ LC EG+V A LEL + P+ T N ++G C
Sbjct: 249 KLGYEPNTITFSTLINGLCLEGRVSEA----LELVDRMVEMGHKPDLITINTLVNGLCLS 304
Query: 251 NRVDEAQWTIQEMKGHGCHPCVIS-----------------------------------Y 275
+ EA I +M +GC P ++ Y
Sbjct: 305 GKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY 364
Query: 276 STIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKI 335
S II C+ + + L +EM+ +G N++TY ++ +G +++ ++ M
Sbjct: 365 SIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIK 424
Query: 336 VGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHE 395
P+ F+ LI + + +++EA +++ EM G+APDT T+ ++I F H +
Sbjct: 425 RKINPNVVTFSVLIDSFVKEGKLREAEELHK-EMIHRGIAPDTITYTSLIDGFCKENHLD 483
Query: 396 KAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYT 455
KA +++ M + C PN++TF+ L+ K + D+ L +L M + ++ D TY
Sbjct: 484 KANQMVDLMVS-KGCDPNIRTFNILINGYCKANRIDDGL-ELFRKMSLRGVVA-DTVTYN 540
Query: 456 LVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV----KQKHMYDAAEKIE 509
+I G C K A LF+EM+ + P T +++LD + + + + EKIE
Sbjct: 541 TLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIE 598
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 160/335 (47%), Gaps = 8/335 (2%)
Query: 164 HIVTLNTIAKVMRRFSGAG---QWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVE 220
H L T+ R FS Q++ + ++ G+ N T++++++ C+ K+
Sbjct: 179 HSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLC 238
Query: 221 LARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
LA S ++ K PN TF+ I+G C RV EA + M G P +I+ +T++
Sbjct: 239 LAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLV 298
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
C ++ L+D+M GC PN VTY V++ + KSG A+ + KM+ K
Sbjct: 299 NGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIK 358
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
D+ ++ +I L + + A ++ EM G+ + T+N +I F + G +
Sbjct: 359 LDAVKYSIIIDGLCKHGSLDNAFNLFN-EMEMKGITTNIITYNILIGGFCNAGRWDDGAK 417
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIH 459
+L +M K PNV TF L+ S K GK E +L +M+++ ++ D TYT +I
Sbjct: 418 LLRDMIK-RKINPNVVTFSVLIDSFVKEGKLREA-EELHKEMIHR-GIAPDTITYTSLID 474
Query: 460 GLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
G C+ N + A + M+ P +T ++++
Sbjct: 475 GFCKENHLDKANQMVDLMVSKGCDPNIRTFNILIN 509
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 115/271 (42%), Gaps = 39/271 (14%)
Query: 273 ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEK 332
+SY ++S +L +M P V+ ++ + S +AK+ ++ + + ++
Sbjct: 152 LSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQ 211
Query: 333 MKI-----------------------------------VGSKPDSRFFNCLIYTLGRASR 357
M++ +G +P++ F+ LI L R
Sbjct: 212 MELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGR 271
Query: 358 VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTF 417
V EA+ + M E G PD T NT++ G +A ++++M + C+PN T+
Sbjct: 272 VSEALELVD-RMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEY-GCQPNAVTY 329
Query: 418 HPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
P+L K+G+T L+ L + + ++ LD Y+++I GLC+ + A+ LF EM
Sbjct: 330 GPVLNVMCKSGQT--ALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM 387
Query: 478 IGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
IT T +++ +D K+
Sbjct: 388 EMKGITTNIITYNILIGGFCNAGRWDDGAKL 418
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 98/205 (47%), Gaps = 5/205 (2%)
Query: 117 ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVM 175
L +FR S G + Y ++ ++ +++ + L +EM S+ + T ++
Sbjct: 520 GLELFR-KMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILL 578
Query: 176 RRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCI 233
G+ E A+ F+++ +E + N+++ +C KV+ A +F L LK +
Sbjct: 579 DGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG-V 637
Query: 234 PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
P T+NI I G CK + EA+ ++M+ G P +Y+ +I+++ + +K +
Sbjct: 638 KPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVK 697
Query: 294 LLDEMQAQGCPPNVVTYTTVMSYLA 318
L++E++ G + T V+ L+
Sbjct: 698 LIEELKRCGFSVDASTIKMVIDMLS 722
>gi|218202055|gb|EEC84482.1| hypothetical protein OsI_31142 [Oryza sativa Indica Group]
Length = 586
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 101/389 (25%), Positives = 168/389 (43%), Gaps = 7/389 (1%)
Query: 117 ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMR 176
+L F +AG PG+ H + ++ + L R +R+LL ++ + + + R
Sbjct: 112 SLRFFLFAGELPGFSHHPDSLLVLANSLAGARLFPLLRSLLSDLPPSAL-SRGLFPLLFR 170
Query: 177 RFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPN 236
+S A EDA+R F + FG + LL L + G VE F E + +
Sbjct: 171 AYSRARLPEDAIRAFSSMAGFGFPPTIADFHSLLFALSRNGLVEYGERFFRESSAQFDVS 230
Query: 237 AHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLD 296
A + I I GW + + + A+ EM G V Y+ +I + CR + + E L
Sbjct: 231 AKAYTILISGWAVVKKPENARSLFDEMVERGVELDVHVYNALIDALCRGGDITSAQEQLS 290
Query: 297 EMQ-AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
MQ + G PN TY + S D A+R+ ++M P+ +N +I L
Sbjct: 291 NMQKSHGLVPNAATYGPFLHAACASKDVRAALRVLDRMHTHALTPNVFTYNAVIRLLCDL 350
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQ 415
+ EA + E+ G PD ++NT++ KA ++ M+K E C P+
Sbjct: 351 GEINEAYNILD-EITTQGEKPDVWSYNTLLNAHCKLKEVNKALRLISRMDK-ELCPPDRH 408
Query: 416 TFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC-RANKCEWAYLLF 474
+++ LLK G+ D + ++ D M K TY ++IHGL + + E A F
Sbjct: 409 SYNMLLKMLIGVGRFDTAI-EVWDGM-EKRGFHPGAATYAVMIHGLASKKGRAEDACSYF 466
Query: 475 KEMIGHDITPRYQTCRLILDEVKQKHMYD 503
M+ I P TC ++ D + + D
Sbjct: 467 VRMVDEGIPPYQATCEVLRDRLLMLGLRD 495
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 111/395 (28%), Positives = 195/395 (49%), Gaps = 22/395 (5%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +++D L K R+ D+ R L +EM ++G + + + ++ F +G+WE A F+E+
Sbjct: 168 YSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEML 227
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL---KSCIPPNAHTFNIFIHGWCKINR 252
G++ + T +L+D CKEGKV A LE+ + CI + T++ I G C +R
Sbjct: 228 DVGIQPDVTTSGVLIDMFCKEGKVIEANE-LLEVMVHRGCIL-DIVTYSTLIKGLCMKHR 285
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY----ELLDEMQAQGCP---P 305
+ EA MK GC P I+Y T+++ C+ + E+L++ G P
Sbjct: 286 ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRP 345
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
+V T + ++ L K G EA + E M G D ++ LI L R+ EA +++
Sbjct: 346 DVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLF 405
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM-NKLEH----CKPNVQTFHPL 420
+ M + G PD T+ T++ G+ A + +EM N CKP + ++ +
Sbjct: 406 -MSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSII 464
Query: 421 LKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH 480
+ K + DE +L ++M + D+ +YT +IHG C + K E A LF EM+
Sbjct: 465 IDGLCKDRREDEA-RELFEEM-KAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDV 522
Query: 481 DITPRYQTCRLILDEV-KQKHMYDAAEKIEAVMKK 514
I P T +++D + K+ + +A + +E V+++
Sbjct: 523 GIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQR 557
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 125/470 (26%), Positives = 216/470 (45%), Gaps = 30/470 (6%)
Query: 62 PRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALG 119
P L +II + EDE + L ++ I P LIH F W+ A
Sbjct: 456 PTLISYSIIIDGLCKDRREDEA-RELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKC 514
Query: 120 IFRW---AGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEE-MSKGHIVTLNTIAKVM 175
+F G P SS +++D+L K ++ + LLE + +G I+ + T ++
Sbjct: 515 LFNEMLDVGIQPDVTTSS----VLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLV 570
Query: 176 RRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS---- 231
+ + A + F ++ G N T L+ LC+ G +++A + + S
Sbjct: 571 KGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSP 630
Query: 232 ----CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYN 287
C PNA +++I I G CK R DEA+ +EMK G P VISY+++I +CR
Sbjct: 631 YGINC-KPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGK 689
Query: 288 FSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNC 347
+ L +EM G P+V T++ ++ L K G EA + E M G P++ +
Sbjct: 690 WKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTT 749
Query: 348 LIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM--- 404
L+ L R+ EA ++ ++M + G PD T+ T++ G+ + A + ++M
Sbjct: 750 LVKGLCMNDRISEATQLF-MKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSD 808
Query: 405 --NKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC 462
+ KP+V ++ ++ K G+ DE +L +M + ++ +YT +IHG C
Sbjct: 809 TGQYGTNFKPDVISYSIIIDGLCKHGREDEA-RELFKEM-KALGVIPNVISYTSLIHGFC 866
Query: 463 RANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA--EKIEA 510
R+ K E A LF EM+ + T +++ ++ D A +K+EA
Sbjct: 867 RSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKALFQKMEA 916
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 187/391 (47%), Gaps = 19/391 (4%)
Query: 139 MMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTF 197
M++DIL K ++ + LLE M +G I+ + T + +++ + +A F +
Sbjct: 352 MLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKL 411
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVFLELKS--------CIPPNAHTFNIFIHGWCK 249
G + T L+ LC+ G + +A + E+ + C P +++I I G CK
Sbjct: 412 GCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKC-KPTLISYSIIIDGLCK 470
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
R DEA+ +EMK G P VISY+T+I +C + K L +EM G P+V T
Sbjct: 471 DRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTT 530
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM 369
+ ++ L K G EA ++ E + G D L+ L R+ +A ++ ++M
Sbjct: 531 SSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLF-LKM 589
Query: 370 PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE-----HCKPNVQTFHPLLKSC 424
+ G P+ T T++ G+ + A + + M +CKPN ++ ++
Sbjct: 590 QKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGL 649
Query: 425 FKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
K G+ DE +L +M + D+ +YT +IHG CR+ K + A LF EM+ + P
Sbjct: 650 CKCGREDEA-RELFKEM-KALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQP 707
Query: 485 RYQTCRLILDEV-KQKHMYDAAEKIEAVMKK 514
T +++D + K+ + +A E +E ++++
Sbjct: 708 DVTTFSVLIDMLCKEGKVIEANELLEVMIQR 738
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 115/454 (25%), Positives = 207/454 (45%), Gaps = 23/454 (5%)
Query: 62 PRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALG 119
P L +II + EDE + K+ + P LIH F W+ A
Sbjct: 163 PTLISYSIIIDGLCKDRREDEARELFKEMKA-QGMMPDVISYTSLIHGFCHSGKWEKAKC 221
Query: 120 IFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRF 178
+F G + +++D+ K ++ + LLE M +G I+ + T + +++
Sbjct: 222 LFNEMLD-VGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGL 280
Query: 179 SGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS------- 231
+ +A + F + G + L+ LC+ GK+ +A + E+ +
Sbjct: 281 CMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGI 340
Query: 232 -CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSK 290
CI P+ T ++ I CK +V EA ++ M GC +++YST+I+ C ++ S+
Sbjct: 341 KCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISE 400
Query: 291 VYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM------KIVGSKPDSRF 344
L MQ GC P+ +TY T+M L ++G+ A+++ ++M + KP
Sbjct: 401 ATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLIS 460
Query: 345 FNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
++ +I L + R EA +++ EM G+ PD ++ T+I F G EKA + EM
Sbjct: 461 YSIIIDGLCKDRREDEARELFE-EMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEM 519
Query: 405 NKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRA 464
+ +P+V T L+ K GK E ++LL+ ++ + + LD+ T T ++ GLC
Sbjct: 520 LDV-GIQPDVTTSSVLIDMLCKKGKVIEA-NKLLEVVIQRGCI-LDVVTCTTLVKGLCMK 576
Query: 465 NKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQ 498
++ A LF +M P TC ++ + Q
Sbjct: 577 HRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQ 610
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 111/406 (27%), Positives = 182/406 (44%), Gaps = 31/406 (7%)
Query: 98 PSHYLVNKLIH------RFKDDWKSALGIFRWAGSCPG---YEHSSEIY--EMMVDILGK 146
P + N LI+ R + + GI R G P Y ++ M++DIL K
Sbjct: 8 PDSFTFNILINCLCNVKRVNEGLAAMAGIMR-RGYIPDIVTYSIRPDVTTSSMLIDILCK 66
Query: 147 VRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTET 205
++ + LLE M +G I+ + T + +++ + +A F + G + T
Sbjct: 67 EGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAIT 126
Query: 206 MNLLLDTLCKEGKVELARSVFLELKS--------CIPPNAHTFNIFIHGWCKINRVDEAQ 257
L+ LC+ G + +A + E+ + C P +++I I G CK R DEA+
Sbjct: 127 YGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKC-KPTLISYSIIIDGLCKDRREDEAR 185
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
+EMK G P VISY+++I +C + K L +EM G P+V T ++
Sbjct: 186 ELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMF 245
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
K G EA + E M G D ++ LI L R+ EA ++ + M + G PD
Sbjct: 246 CKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLF-MSMKKLGCRPD 304
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEM------NKLEHCKPNVQTFHPLLKSCFKTGKTD 431
+ T++ G A H+ +EM ++ +P+V T L+ K GK
Sbjct: 305 AIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVI 364
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
E ++LL+ M+ + + LDI TY+ +I GLC ++ A LF M
Sbjct: 365 EA-NELLEVMIQRGCI-LDIVTYSTLIKGLCMEHRISEATWLFMSM 408
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 170/364 (46%), Gaps = 34/364 (9%)
Query: 168 LNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFL 227
L +A +MRR G D V T+ + + T ++L+D LCKEGKV A L
Sbjct: 30 LAAMAGIMRR----GYIPDIV-------TYSIRPDVTTSSMLIDILCKEGKVIEANE-LL 77
Query: 228 EL---KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCR 284
E+ + CI + T++ I G C +R+ EA W M+ GC P I+Y T+++ C+
Sbjct: 78 EVMIQRGCI-LDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQ 136
Query: 285 QYNFSKVYELLDEM------QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
N + +L EM C P +++Y+ ++ L K +EA + ++MK G
Sbjct: 137 TGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGM 196
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
PD + LI+ + + ++A ++ EM + G+ PD +T +I MF G +A
Sbjct: 197 MPDVISYTSLIHGFCHSGKWEKAKCLFN-EMLDVGIQPDVTTSGVLIDMFCKEGKVIEAN 255
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
+LE M C ++ T+ L+K + E +QL M K D Y ++
Sbjct: 256 ELLEVMVH-RGCILDIVTYSTLIKGLCMKHRISEA-TQLFMSM-KKLGCRPDAIAYGTLM 312
Query: 459 HGLCRANKCEWAYLLFKEMIGHD-------ITPRYQTCRLILDEV-KQKHMYDAAEKIEA 510
GLC+ K A L +EM+ I P T +++D + K+ + +A E +E
Sbjct: 313 KGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEV 372
Query: 511 VMKK 514
++++
Sbjct: 373 MIQR 376
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 150/296 (50%), Gaps = 20/296 (6%)
Query: 198 GLEKNTETMNLLLDTLCKEGKVE--LARSVFLELKSCIP--------PNAHTFNIFIHGW 247
GL ++ T N+L++ LC +V LA + + IP P+ T ++ I
Sbjct: 5 GLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDIL 64
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
CK +V EA ++ M GC +++YST+I+ C ++ S+ L MQ GC P+
Sbjct: 65 CKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDA 124
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKM------KIVGSKPDSRFFNCLIYTLGRASRVQEA 361
+TY T+M L ++G+ A+++ ++M + KP ++ +I L + R EA
Sbjct: 125 ITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEA 184
Query: 362 VYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLL 421
+++ EM G+ PD ++ ++I F H G EKA + EM + +P+V T L+
Sbjct: 185 RELFK-EMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDV-GIQPDVTTSGVLI 242
Query: 422 KSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
K GK E ++LL+ MV++ + LDI TY+ +I GLC ++ A LF M
Sbjct: 243 DMFCKEGKVIEA-NELLEVMVHRGCI-LDIVTYSTLIKGLCMKHRISEATQLFMSM 296
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 126/295 (42%), Gaps = 53/295 (17%)
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYEL 294
P++ TFNI I+ C + RV+E + M G
Sbjct: 8 PDSFTFNILINCLCNVKRVNEG---LAAMAG----------------------------- 35
Query: 295 LDEMQAQGCPPNVVTYTT---------VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFF 345
+ +G P++VTY+ ++ L K G EA + E M G D +
Sbjct: 36 ---IMRRGYIPDIVTYSIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTY 92
Query: 346 NCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM- 404
+ LI L R+ EA +++ + M + G PD T+ T++ G+ A + +EM
Sbjct: 93 STLIKGLCMEHRISEATWLF-MSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEML 151
Query: 405 NKLEH----CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHG 460
N CKP + ++ ++ K + DE +L +M + + D+ +YT +IHG
Sbjct: 152 NDTGRYGIKCKPTLISYSIIIDGLCKDRREDEA-RELFKEMKAQGMMP-DVISYTSLIHG 209
Query: 461 LCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEAVMKK 514
C + K E A LF EM+ I P T +++D K+ + +A E +E ++ +
Sbjct: 210 FCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHR 264
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 48/199 (24%)
Query: 333 MKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV--------YQVEMPENGVAPDTSTFNTM 384
M++ G PDS FN LI L RV E + Y ++ + PD +T + +
Sbjct: 1 MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSML 60
Query: 385 ITMFSHHGHHEKAFHVLEEMNK------------------LEH----------------C 410
I + G +A +LE M + +EH C
Sbjct: 61 IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGC 120
Query: 411 KPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVN---KHHLSLDIT--TYTLVIHGLCRAN 465
+P+ T+ L+K +TG + L QL +M+N ++ + T +Y+++I GLC+
Sbjct: 121 RPDAITYGTLMKGLCQTGNINIAL-QLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDR 179
Query: 466 KCEWAYLLFKEMIGHDITP 484
+ + A LFKEM + P
Sbjct: 180 REDEARELFKEMKAQGMMP 198
>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
Length = 699
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 117/419 (27%), Positives = 185/419 (44%), Gaps = 84/419 (20%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKG---HIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y +V L K + D+ + +L EM ++G VT +T+ + +F G E A R +
Sbjct: 129 YTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKF---GSEEQAFRVLE 185
Query: 193 ELGTFGLEKNTETMNLLLDTLC-KEGKVELARSVF------------------------- 226
++ G+ + ++ LC K VELA V
Sbjct: 186 DVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKA 245
Query: 227 ---------LEL---KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVIS 274
LE+ K C+P N TF I I G CK NRV EAQ +++M GC P V++
Sbjct: 246 KDLDSAYKLLEVMIEKGCVP-NVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVT 304
Query: 275 YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
YST+I C+Q YEL M+ + CPPNVVT+ ++ L K+ EEA ++ +M+
Sbjct: 305 YSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMR 364
Query: 335 IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV-APDTSTFNTMITMFSHHGH 393
G PD +N LI L ++ +V EA ++Q +PE+GV A + T++T+ ++ G
Sbjct: 365 ETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQT-IPESGVSAANAVTYSTLFHGYAALGR 423
Query: 394 HEKAFHVLEEMNK--------------LEHCK--------------------PNVQTFHP 419
A + + LE+CK P V T
Sbjct: 424 MADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSA 483
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
+L F+ T+ + QL D M + + D Y LV+ G+ RA+K + A + +++I
Sbjct: 484 VLGGLFEGNHTERAI-QLFDSMAAR-GCTDDALIYNLVVEGMARASKHDKALAVLEQVI 540
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 180/396 (45%), Gaps = 8/396 (2%)
Query: 112 DDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEE-MSKGHIVTLNT 170
D + L F WA S G H+ +D+L ++ + + AL M++ + T
Sbjct: 2 DKPELVLLFFDWARSRVG--HNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFT 59
Query: 171 IAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK 230
++R FS AG + A++ +E+ + G E N L+ LC G+V A F +
Sbjct: 60 YGILIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMA 119
Query: 231 SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSK 290
P+ T+ +H CK + DEAQ ++EM GC P +++ST+I C+ + +
Sbjct: 120 KDCAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQ 179
Query: 291 VYELLDEMQAQGCPPNVVTYTTVMSYLA-KSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
+ +L+++ +G + + T++ L K E A ++ + G P FN +I
Sbjct: 180 AFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVI 239
Query: 350 YTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH 409
+A + A + +V M E G P+ TF +IT +A +LE+M +
Sbjct: 240 NGFCKAKDLDSAYKLLEV-MIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKM-VMGG 297
Query: 410 CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEW 469
C PNV T+ ++ K G+ D+ L ++ + + ++ T+ ++I GLC+A + E
Sbjct: 298 CSPNVVTYSTVINGLCKQGQVDDAYE--LFQLMERRNCPPNVVTHNILIDGLCKAKRIEE 355
Query: 470 AYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
A L+ M P T ++D + + D A
Sbjct: 356 ARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEA 391
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 98/415 (23%), Positives = 186/415 (44%), Gaps = 49/415 (11%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKG----HIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
+ +++ L K ++ + + LLE+M G ++VT +T V+ GQ +DA F
Sbjct: 270 FTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYST---VINGLCKQGQVDDAYELFQ 326
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK--SCIP---------------- 234
+ N T N+L+D LCK ++E AR ++ ++ C P
Sbjct: 327 LMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSF 386
Query: 235 -------------------PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISY 275
NA T++ HG+ + R+ +A + G P + +Y
Sbjct: 387 QVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATY 446
Query: 276 STIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKI 335
+++I YC+ +V EL++EM ++G PP V T + V+ L + E AI++ + M
Sbjct: 447 TSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAA 506
Query: 336 VGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ--VEMPENGVAPDTSTFNTMITMFSHHGH 393
G D+ +N ++ + RAS+ +A+ V + ++ + P +S + ++ G
Sbjct: 507 RGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGK 566
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
+ A +L +M++ V +++ LL + + DE +Q+ + MV+ + +I+T
Sbjct: 567 TDDAKQLLHKMSE-RGFAAAVSSYNRLLSGLSRLQRWDEA-TQVFEAMVSAGP-APEIST 623
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+VI LC A K + AY L + M P +TC ++ + D A K+
Sbjct: 624 VNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKL 678
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 158/317 (49%), Gaps = 11/317 (3%)
Query: 202 NTETMNLLLDTLCKEGKVELARSVFLELKSCI-PPNAHTFNIFIHGWCKINRVDEAQWTI 260
N + N LD LC+ + + A ++F + I PN T+ I I G+ +D A +
Sbjct: 21 NVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLL 80
Query: 261 QEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG--CPPNVVTYTTVMSYLA 318
+EMK G + ++T+++ C + +V E L+ +A C P+V+TYT ++ L
Sbjct: 81 EEMKSSGFEGNAVVHTTLMKGLC---DAGRVVEALEHFRAMAKDCAPDVMTYTALVHALC 137
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDT 378
K+G F+EA + +M G PD+ F+ LI L + ++A V + ++ + G+
Sbjct: 138 KAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLE-DVIQRGMGNSD 196
Query: 379 STFNTMIT-MFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
+ F T+I + + + E A VL + + P V F+ ++ K D +L
Sbjct: 197 AAFETIIQRLCNKYNSVELASKVLGVVIA-KGFTPTVLMFNLVINGFCKAKDLDSAY-KL 254
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVK 497
L+ M+ K + ++ T+T++I GLC+AN+ A L ++M+ +P T +++ +
Sbjct: 255 LEVMIEKGCVP-NVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLC 313
Query: 498 QKHMYDAAEKIEAVMKK 514
++ D A ++ +M++
Sbjct: 314 KQGQVDDAYELFQLMER 330
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 133/291 (45%), Gaps = 4/291 (1%)
Query: 218 KVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
K EL F +S + N + N + C++NR EA + C P +Y
Sbjct: 3 KPELVLLFFDWARSRVGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGI 62
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+I+ + + +LL+EM++ G N V +TT+M L +G EA+ M
Sbjct: 63 LIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMA-KD 121
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKA 397
PD + L++ L +A + EA + + EM G APDT TF+T+I G E+A
Sbjct: 122 CAPDVMTYTALVHALCKAGKFDEAQGMLR-EMVAQGCAPDTVTFSTLIDGLCKFGSEEQA 180
Query: 398 FHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLV 457
F VLE++ + + F +++ + E S++L ++ K + + + LV
Sbjct: 181 FRVLEDVIQRGMGNSDA-AFETIIQRLCNKYNSVELASKVLGVVIAK-GFTPTVLMFNLV 238
Query: 458 IHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
I+G C+A + AY L + MI P T +++ + + + A+++
Sbjct: 239 INGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQL 289
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 130/327 (39%), Gaps = 44/327 (13%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTI--AKVMRRFSGAGQWEDAVRTFDEL 194
Y ++D L K Q+D+ L + + + + N + + + ++ G+ DA R F L
Sbjct: 375 YNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSML 434
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRV 253
G + T L+ CK + + E+ S PP +T + + G + N
Sbjct: 435 VDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHT 494
Query: 254 DEAQWTIQEMKGHGC--------------------------------------HPCVISY 275
+ A M GC +P +
Sbjct: 495 ERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAV 554
Query: 276 STIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKI 335
+++S C+ +LL +M +G V +Y ++S L++ ++EA ++ E M
Sbjct: 555 DALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVS 614
Query: 336 VGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHE 395
G P+ N +I L A++V +A + Q M + G PD T NT+I + G +
Sbjct: 615 AGPAPEISTVNVVISWLCSAAKVDDAYELVQ-RMSKLGCCPDIETCNTLIGGYCKSGRAD 673
Query: 396 KAFHVLEEMNKLEHCKPNVQTFHPLLK 422
A +LEEM + +PN T H LL+
Sbjct: 674 LARKLLEEMTE-AGLEPN-DTTHDLLE 698
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 83/187 (44%), Gaps = 5/187 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLN----TIAKVMRRFSGAGQW 184
G + IY ++V+ + + + D+ A+LE++ N + ++ G+
Sbjct: 508 GCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKT 567
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIP-PNAHTFNIF 243
+DA + ++ G + N LL L + + + A VF + S P P T N+
Sbjct: 568 DDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVV 627
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
I C +VD+A +Q M GC P + + +T+I YC+ +LL+EM G
Sbjct: 628 ISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGL 687
Query: 304 PPNVVTY 310
PN T+
Sbjct: 688 EPNDTTH 694
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 175/356 (49%), Gaps = 12/356 (3%)
Query: 144 LGKVRQMDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGL 199
LGK +D R + +M I +T NT+ ++ + G+ ++A + +
Sbjct: 177 LGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCK---KGRVQEAKLIMSHIFRYDA 233
Query: 200 EKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQW 258
N T L+ C+ ++LA ++F + K PN+ T++ I+G C R++EA
Sbjct: 234 YPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMD 293
Query: 259 TIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLA 318
++EM G P V +Y+ + S C S+ ELL +M+ +GC PN+ T+T ++S L+
Sbjct: 294 MLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLS 353
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDT 378
+ G FE AI + KM G P + +N LI L R + A +++ M +G P T
Sbjct: 354 RDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFK-WMLSHGSLPST 412
Query: 379 STFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLL 438
T+N +I F G +KA + ++M K PNV T++ L+ K G + + L
Sbjct: 413 QTYNEIIKCFCLMGDIQKAMVIFDKMLK-AGSSPNVITYNTLIYGYCKQGNLNNAMRLL- 470
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
+++ + L D TYT +I G R K E A LF M+ H I+P + T I+D
Sbjct: 471 -EIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIID 525
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 178/380 (46%), Gaps = 6/380 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G + +S Y +++ L ++++ +LEEM KG T+ T + AG +A
Sbjct: 267 GCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEA 326
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHG 246
V ++ G N +T L+ L ++GK E+A ++ + L + P T+N I+
Sbjct: 327 VELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQ 386
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C R + A + M HG P +Y+ II+ +C + K + D+M G PN
Sbjct: 387 LCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPN 446
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
V+TY T++ K G+ A+R+ E MK G KPD+ + LI R +++ A ++
Sbjct: 447 VITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLF- 505
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
M E+G++P+ T+ +I + + + A + +M + + P+ QT++ ++ K
Sbjct: 506 YGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNL-PSSQTYNVMISGFSK 564
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
T E MV K L ++ TYT I GLCR + A+ +F EM + P
Sbjct: 565 TNSISEA-ENFCGKMV-KQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNL 622
Query: 487 QTCRLILDEVKQKHMYDAAE 506
T ++ + Q+ + AE
Sbjct: 623 YTYSSLIYGLCQEGRAEDAE 642
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 154/335 (45%), Gaps = 3/335 (0%)
Query: 160 MSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV 219
++ G + T T ++ + G++E A F + + G +T+T N ++ C G +
Sbjct: 369 LADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDI 428
Query: 220 ELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTI 278
+ A +F + LK+ PN T+N I+G+CK ++ A ++ MKG+G P +Y+ +
Sbjct: 429 QKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTEL 488
Query: 279 IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
I + R L M G PN VTYT ++ ++A+ + KM G+
Sbjct: 489 ISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGN 548
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
P S+ +N +I + + + EA + +M + G+ P+ T+ + I +G AF
Sbjct: 549 LPSSQTYNVMISGFSKTNSISEAEN-FCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAF 607
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
+ EM K + PN+ T+ L+ + G+ ++ L + + ++ TYT ++
Sbjct: 608 KIFHEMEKRNYF-PNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLV 666
Query: 459 HGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
GLC +C A L M + P + R +L
Sbjct: 667 KGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALL 701
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 144/332 (43%), Gaps = 13/332 (3%)
Query: 94 NAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCP-GYEHSSEIYEMMVDILGKVRQMDQ 152
N ++P + +LI F K + G G + Y ++D + ++D
Sbjct: 476 NGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDD 535
Query: 153 MRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLD 211
AL +M G++ + T ++ FS +A ++ GL N T +D
Sbjct: 536 ALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFID 595
Query: 212 TLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQW--TIQEMKGHGC 268
LC+ G+ LA +F E+ K PN +T++ I+G C+ R ++A+ + + +GC
Sbjct: 596 GLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGC 655
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
P V +Y+T+++ C + + +L+ MQ +G P+ Y ++ K+ E A+
Sbjct: 656 EPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALN 715
Query: 329 ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF 388
I M +G + + LI L + + ++EA ++Q M E D + ++
Sbjct: 716 IFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQT-MLEKHWNSDEVVWTVLLDGL 774
Query: 389 SHHGHHE---KAFHVLEEMNKLEHCKPNVQTF 417
G + K HV+E N C N QT+
Sbjct: 775 LKEGETDLCLKLLHVMESRN----CTLNFQTY 802
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 101/234 (43%), Gaps = 37/234 (15%)
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA------V 362
++TT++ L K + A + KM G +P FN +I L + RVQEA +
Sbjct: 169 SFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHI 228
Query: 363 YVYQV----------------------------EMPENGVAPDTSTFNTMITMFSHHGHH 394
+ Y M ++G P++ T++T+I G
Sbjct: 229 FRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRL 288
Query: 395 EKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTY 454
E+A +LEEM + + +P V T+ L S G + E + +LL M K +I T+
Sbjct: 289 EEAMDMLEEMVQ-KGIEPTVYTYTIPLVSLCDAGCSSEAV-ELLGKM-KKRGCVPNIQTF 345
Query: 455 TLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
T +I GL R K E A L+ +M+ + P T +++++ + ++ A I
Sbjct: 346 TALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTI 399
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 88/194 (45%), Gaps = 8/194 (4%)
Query: 325 EAIRITEKMKIVGSKPDSRF----FNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTST 380
E R+T+ + + SK D + F L+ LG+ V A +Y ++M +G+ P T
Sbjct: 146 EVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMY-IKMLNSGIRPSLLT 204
Query: 381 FNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDD 440
FNTMI + G ++A ++ + + + PN T+ L+ + D + + D
Sbjct: 205 FNTMINILCKKGRVQEAKLIMSHIFRYD-AYPNAFTYTSLILGHCRNHNLDLAFA-MFDR 262
Query: 441 MVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKH 500
MV K + TY+ +I+GLC + E A + +EM+ I P T + L +
Sbjct: 263 MV-KDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAG 321
Query: 501 MYDAAEKIEAVMKK 514
A ++ MKK
Sbjct: 322 CSSEAVELLGKMKK 335
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 88/208 (42%), Gaps = 3/208 (1%)
Query: 130 YEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVR 189
Y +SS IY + + G+ + L G ++T +++ G G+ +A +
Sbjct: 623 YTYSSLIYGLCQE--GRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQ 680
Query: 190 TFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWC 248
+ GL+ + E LL CK KVE A ++F + + + + I C
Sbjct: 681 LVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALC 740
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
K N ++EAQ Q M + + ++ ++ ++ +LL M+++ C N
Sbjct: 741 KENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQ 800
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIV 336
TY + L+ + +I++++ IV
Sbjct: 801 TYVMLARELSALDCAIKIPQISQQLGIV 828
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 175/356 (49%), Gaps = 12/356 (3%)
Query: 144 LGKVRQMDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGL 199
LGK +D R + +M I +T NT+ ++ + G+ ++A + +
Sbjct: 177 LGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCK---KGRVQEAKLIMSHIFRYDA 233
Query: 200 EKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQW 258
N T L+ C+ ++LA ++F + K PN+ T++ I+G C R++EA
Sbjct: 234 YPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMD 293
Query: 259 TIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLA 318
++EM G P V +Y+ + S C S+ ELL +M+ +GC PN+ T+T ++S L+
Sbjct: 294 MLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLS 353
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDT 378
+ G FE AI + KM G P + +N LI L R + A +++ M +G P T
Sbjct: 354 RDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFK-WMLSHGSLPST 412
Query: 379 STFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLL 438
T+N +I F G +KA + ++M K PNV T++ L+ K G + + L
Sbjct: 413 QTYNEIIKCFCLMGDIQKAMVIFDKMLK-AGSSPNVITYNTLIYGYCKQGNLNNAMRLL- 470
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
+++ + L D TYT +I G R K E A LF M+ H I+P + T I+D
Sbjct: 471 -EIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIID 525
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 178/380 (46%), Gaps = 6/380 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G + +S Y +++ L ++++ +LEEM KG T+ T + AG +A
Sbjct: 267 GCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEA 326
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHG 246
V ++ G N +T L+ L ++GK E+A ++ + L + P T+N I+
Sbjct: 327 VELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQ 386
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C R + A + M HG P +Y+ II+ +C + K + D+M G PN
Sbjct: 387 LCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPN 446
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
V+TY T++ K G+ A+R+ E MK G KPD+ + LI R +++ A ++
Sbjct: 447 VITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLF- 505
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
M E+G++P+ T+ +I + + + A + +M + + P+ QT++ ++ K
Sbjct: 506 YGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNL-PSSQTYNVMISGFSK 564
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
T E MV K L ++ TYT I GLCR + A+ +F EM + P
Sbjct: 565 TNSISEA-ENFCGKMV-KQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNL 622
Query: 487 QTCRLILDEVKQKHMYDAAE 506
T ++ + Q+ + AE
Sbjct: 623 YTYSSLIYGLCQEGRAEDAE 642
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 154/335 (45%), Gaps = 3/335 (0%)
Query: 160 MSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV 219
++ G + T T ++ + G++E A F + + G +T+T N ++ C G +
Sbjct: 369 LADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDI 428
Query: 220 ELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTI 278
+ A +F + LK+ PN T+N I+G+CK ++ A ++ MKG+G P +Y+ +
Sbjct: 429 QKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTEL 488
Query: 279 IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
I + R L M G PN VTYT ++ ++A+ + KM G+
Sbjct: 489 ISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGN 548
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
P S+ +N +I + + + EA + +M + G+ P+ T+ + I +G AF
Sbjct: 549 LPSSQTYNVMISGFSKTNSISEAEN-FCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAF 607
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
+ EM K + PN+ T+ L+ + G+ ++ L + + ++ TYT ++
Sbjct: 608 KIFHEMEKRNYF-PNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLV 666
Query: 459 HGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
GLC +C A L M + P + R +L
Sbjct: 667 KGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALL 701
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 144/332 (43%), Gaps = 13/332 (3%)
Query: 94 NAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCP-GYEHSSEIYEMMVDILGKVRQMDQ 152
N ++P + +LI F K + G G + Y ++D + ++D
Sbjct: 476 NGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDD 535
Query: 153 MRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLD 211
AL +M G++ + T ++ FS +A ++ GL N T +D
Sbjct: 536 ALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFID 595
Query: 212 TLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQW--TIQEMKGHGC 268
LC+ G+ LA +F E+ K PN +T++ I+G C+ R ++A+ + + +GC
Sbjct: 596 GLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGC 655
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
P V +Y+T+++ C + + +L+ MQ +G P+ Y ++ K+ E A+
Sbjct: 656 EPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALN 715
Query: 329 ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF 388
I M +G + + LI L + + ++EA ++Q M E D + ++
Sbjct: 716 IFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQT-MLEKHWNSDEVAWTVLLDGL 774
Query: 389 SHHGHHE---KAFHVLEEMNKLEHCKPNVQTF 417
G + K HV+E N C N QT+
Sbjct: 775 LKEGETDLCLKLLHVMESRN----CTLNFQTY 802
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 101/234 (43%), Gaps = 37/234 (15%)
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA------V 362
++TT++ L K + A + KM G +P FN +I L + RVQEA +
Sbjct: 169 SFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHI 228
Query: 363 YVYQV----------------------------EMPENGVAPDTSTFNTMITMFSHHGHH 394
+ Y M ++G P++ T++T+I G
Sbjct: 229 FRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRL 288
Query: 395 EKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTY 454
E+A +LEEM + + +P V T+ L S G + E + +LL M K +I T+
Sbjct: 289 EEAMDMLEEMVQ-KGIEPTVYTYTIPLVSLCDAGCSSEAV-ELLGKM-KKRGCVPNIQTF 345
Query: 455 TLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
T +I GL R K E A L+ +M+ + P T +++++ + ++ A I
Sbjct: 346 TALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTI 399
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 88/194 (45%), Gaps = 8/194 (4%)
Query: 325 EAIRITEKMKIVGSKPDSRF----FNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTST 380
E R+T+ + + SK D + F L+ LG+ V A +Y ++M +G+ P T
Sbjct: 146 EVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMY-IKMLNSGIRPSLLT 204
Query: 381 FNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDD 440
FNTMI + G ++A ++ + + + PN T+ L+ + D + + D
Sbjct: 205 FNTMINILCKKGRVQEAKLIMSHIFRYD-AYPNAFTYTSLILGHCRNHNLDLAFA-MFDR 262
Query: 441 MVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKH 500
MV K + TY+ +I+GLC + E A + +EM+ I P T + L +
Sbjct: 263 MV-KDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAG 321
Query: 501 MYDAAEKIEAVMKK 514
A ++ MKK
Sbjct: 322 CSSEAVELLGKMKK 335
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 89/208 (42%), Gaps = 3/208 (1%)
Query: 130 YEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVR 189
Y +SS IY + + G+ + L G ++T +++ G G+ +A +
Sbjct: 623 YTYSSLIYGLCQE--GRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQ 680
Query: 190 TFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWC 248
+ GL+ + E LL CK KVE A ++F + + + + I C
Sbjct: 681 LVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALC 740
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
K N ++EAQ Q M + ++++ ++ ++ +LL M+++ C N
Sbjct: 741 KENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQ 800
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIV 336
TY + L+ + +I++++ IV
Sbjct: 801 TYVMLARELSALDCAIKIPQISQQLGIV 828
>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
Length = 1056
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 189/409 (46%), Gaps = 29/409 (7%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDA 187
G+ + Y MVD L K +++ +L+ +++ T+ T + S AG A
Sbjct: 171 GFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGA 230
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGW 247
FD + G+ NT T + L+D LCK GK+++A + + S F+ +HG
Sbjct: 231 YEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNS--QAGMFAFSSLLHGL 288
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
C+ +R++EA IQ +K C P V+ +++++ C+ + +EL D M+ GC +V
Sbjct: 289 CQAHRLEEA---IQLLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADV 345
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIV-GSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
+TY ++ L K EA R E M+ G P+ F+ LI L A RV +A VY+
Sbjct: 346 ITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYE 405
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH----------------- 409
+ G++P+ T+ ++ G + E+M + E
Sbjct: 406 RMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLM 465
Query: 410 ---CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANK 466
C+P + T++ L+ K+G + L LL+ M+ + LS D+ T+ V+ GLC+ +
Sbjct: 466 VQVCRPTLVTYNTLVTGLSKSGMVRDALG-LLEFMI-ESGLSPDVITFNSVLDGLCKEQR 523
Query: 467 CEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
A+ +FK + P T ++D + + D A ++ A M +L
Sbjct: 524 ILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVEL 572
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 137/273 (50%), Gaps = 5/273 (1%)
Query: 205 TMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
T N+L++ LCK G+V A + F + ++ P T++ I G C+ N VD+ ++EM
Sbjct: 3 TYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEM 62
Query: 264 KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF 323
G GC P ++Y+T++ + Q + + LL+ M A GCPP ++T+ ++ L K G+
Sbjct: 63 AGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEI 122
Query: 324 EEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNT 383
E A R+ ++M G PD L++ L RV EA + +Q ++ G PD T+NT
Sbjct: 123 EAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQ-QVLLIGFTPDAVTYNT 181
Query: 384 MITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVN 443
M+ G E A VL+ + + P V TF + K G + D M
Sbjct: 182 MVDGLYKAGRLEAAGMVLQLLAE-SFSSPTVFTFTIAVDGLSKAGNLTGAY-EFFDSM-P 238
Query: 444 KHHLSLDITTYTLVIHGLCRANKCEWAYLLFKE 476
+ +S + TY +I GLC+A K + A L ++
Sbjct: 239 QTGVSPNTVTYDALIDGLCKAGKLDIALGLLRD 271
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 167/365 (45%), Gaps = 44/365 (12%)
Query: 156 LLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK 215
L+ ++ + +VT NT+ + S +G DA+ + + GL + T N +LD LCK
Sbjct: 464 LMVQVCRPTLVTYNTLVTGL---SKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCK 520
Query: 216 EGKVELARSVF---LELKSCIP----------------------------------PNAH 238
E ++ A +VF LE + C P N
Sbjct: 521 EQRILDAHNVFKRALE-RGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTV 579
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
T++ + G K+ R+++A +++M+ GC P ++Y+T+I + ++ + LL EM
Sbjct: 580 TYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREM 639
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRV 358
G P+VVTYTT+ L +SG F+EA+ I + M G P++ ++ ++ L +A RV
Sbjct: 640 LEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRV 699
Query: 359 QEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFH 418
EA+ ++ + VAP ++ +I G ++A+ LE M + P+V TF
Sbjct: 700 TEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRI-PDVVTFS 758
Query: 419 PLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
L+ G+ D L +L M + DI Y +I+ C + AY L +EM
Sbjct: 759 ILINGLCDAGRIDTGL-ELFCGMAER-GCKADIYAYNAMINAYCLKGEFSAAYALLEEMK 816
Query: 479 GHDIT 483
H I
Sbjct: 817 THGIA 821
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 170/385 (44%), Gaps = 41/385 (10%)
Query: 129 GYEHSSEIYEMMVD-ILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWED 186
G ++ Y +V+ +LG+ R + +LLE M+ G L T +++ G+ E
Sbjct: 66 GCAPNAVTYNTLVNALLGQGRAKEAF-SLLERMAANGCPPELITFGLIIKGLCKEGEIEA 124
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIH 245
A R DE+ G + E +LL LC+ G+V+ A F + L P+A T+N +
Sbjct: 125 AFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVD 184
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G K R++ A +Q + P V +++ + + N + YE D M G P
Sbjct: 185 GLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSP 244
Query: 306 NVVTYTTVMSYLAKSGD--------------------------------FEEAIRITEKM 333
N VTY ++ L K+G EEAI++ + M
Sbjct: 245 NTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAM 304
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
V P+ FN L+ L +A RV EA ++ V M E+G + D T+N ++
Sbjct: 305 PCV---PNVVCFNSLMNGLCQARRVDEAFELFDV-MKESGCSADVITYNILLKGLCKLRR 360
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
+A+ +E M + E C PNV TF L++ G+ ++ ++ + MV +S + T
Sbjct: 361 IPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAW-EVYERMVAVEGISPNRFT 419
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMI 478
Y ++ GLC+A F++M+
Sbjct: 420 YAFLLEGLCKAGDSRRLEQCFEQML 444
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 160/336 (47%), Gaps = 13/336 (3%)
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAH 238
AG+ DA F + FG T + ++D LC++ +V+ + E+ + C PNA
Sbjct: 14 AGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGRGC-APNAV 72
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
T+N ++ R EA ++ M +GC P +I++ II+ C++ + ++DEM
Sbjct: 73 TYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEM 132
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRV 358
+G P+V +T ++ L + G +EA +++ ++G PD+ +N ++ L +A R+
Sbjct: 133 VDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRL 192
Query: 359 QEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFH 418
+ A V Q+ + E+ +P TF + S G+ A+ + M + PN T+
Sbjct: 193 EAAGMVLQL-LAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQ-TGVSPNTVTYD 250
Query: 419 PLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
L+ K GK D L L D + + ++ ++HGLC+A++ E A L K M
Sbjct: 251 ALIDGLCKAGKLDIALGLLRD-----KNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAM- 304
Query: 479 GHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
P +++ + Q D A ++ VMK+
Sbjct: 305 --PCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKE 338
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 173/366 (47%), Gaps = 29/366 (7%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLN--TIAKVMRRFSGAGQWEDAVRTFDEL 194
Y +++ L K+R++ + +E M + + N T + +++ AG+ A ++ +
Sbjct: 348 YNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERM 407
Query: 195 -GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-------KSCIP------------ 234
G+ N T LL+ LCK G F ++ S P
Sbjct: 408 VAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQ 467
Query: 235 ---PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKV 291
P T+N + G K V +A ++ M G P VI++++++ C++
Sbjct: 468 VCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDA 527
Query: 292 YELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYT 351
+ + +GC PNVVTY+T++ L+K +EA+++ KM +G + ++ ++ ++
Sbjct: 528 HNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDG 587
Query: 352 LGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCK 411
L + R+++AV V + +M + G PD T+NT+I F +A +L EM +
Sbjct: 588 LLKVGRMEDAVVVLR-QMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGF-H 645
Query: 412 PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAY 471
P+V T+ L ++G+ DE + ++LD M + + + TY+ ++ GLC+A + A
Sbjct: 646 PSVVTYTTLCHGLCRSGRFDEAV-EILDYMAAR-GCAPNAITYSSIVDGLCKAGRVTEAL 703
Query: 472 LLFKEM 477
F++M
Sbjct: 704 GYFEKM 709
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 115/457 (25%), Positives = 206/457 (45%), Gaps = 31/457 (6%)
Query: 69 VIISKVHVGSSEDEVFQSLKQ--DHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWA 124
V+ + VG ED V L+Q D C P N LI F + + A+G+ R
Sbjct: 584 VVDGLLKVGRMEDAVV-VLRQMRDAGC---LPDAVTYNTLIDGFFKRQRLREAVGLLREM 639
Query: 125 GSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQ 183
G+ S Y + L + + D+ +L+ M+ +G T + ++ AG+
Sbjct: 640 LE-AGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGR 698
Query: 184 WEDAVRTFDELGTFGL-EKNTETMNLLLDTLCKEGKVELARSVFLE--LKSCIPPNAHTF 240
+A+ F+++ + + + L+D LCK G+++ A FLE +++ P+ TF
Sbjct: 699 VTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYE-FLERMIRAGRIPDVVTF 757
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
+I I+G C R+D M GC + +Y+ +I +YC + FS Y LL+EM+
Sbjct: 758 SILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKT 817
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAI----RITEKMKIVGSKPDSRFFNCLIYTLGRAS 356
G N VT+ V+ L + +EA+ I E + D +N LI +L +
Sbjct: 818 HGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCR------DEISYNTLITSLVASR 871
Query: 357 RVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQT 416
R ++A+ + + M +G +PD + T++ G E A +L+EM H P+++T
Sbjct: 872 RSEQALELLRA-MVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGH-SPDLRT 929
Query: 417 FHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKE 476
+ ++ S K ++M+ K +L D Y+ +I C+A+K + A+ L +
Sbjct: 930 Y-TIMISGLSKAKQLPLACDYFEEMLRK-NLKPDAIVYSSLIDAFCKADKVDDAWKLLRS 987
Query: 477 MIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
I P ++D + + D A ++ MK
Sbjct: 988 ---SGIEPTITMYSTMVDSLCKNRGTDKALEVIREMK 1021
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 149/338 (44%), Gaps = 37/338 (10%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++D L K ++D+ LE M + G I + T + ++ AG+ + + F +
Sbjct: 722 YSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMA 781
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVD 254
G + + N +++ C +G+ A ++ E+K+ I N T I I C +R+D
Sbjct: 782 ERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRID 841
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA + C ISY+T+I S + ELL M A G P+ Y TVM
Sbjct: 842 EAVSYFHSIP-EDCRD-EISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVM 899
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN-- 372
L K+G E A ++ ++M+ G PD R + +I L +A ++ A ++ + +N
Sbjct: 900 DGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLK 959
Query: 373 -----------------------------GVAPDTSTFNTMITMFSHHGHHEKAFHVLEE 403
G+ P + ++TM+ + +KA V+ E
Sbjct: 960 PDAIVYSSLIDAFCKADKVDDAWKLLRSSGIEPTITMYSTMVDSLCKNRGTDKALEVIRE 1019
Query: 404 MNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDM 441
M K ++C+P + + L + G+ DE + +L++D+
Sbjct: 1020 M-KSKNCEPGIHIWTSLATAYVAEGRVDEAV-KLVNDL 1055
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 103/227 (45%), Gaps = 4/227 (1%)
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
+++Y+ +I C+ + + G P VVTY+TV+ L + + ++ ++ E
Sbjct: 1 MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHH 391
+M G P++ +N L+ L R +EA + + M NG P+ TF +I
Sbjct: 61 EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLE-RMAANGCPPELITFGLIIKGLCKE 119
Query: 392 GHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDI 451
G E AF V++EM P+V+ LL + + G+ DE + V + D
Sbjct: 120 GEIEAAFRVVDEMVDRGFV-PDVEIHTVLLHALCELGRVDE--AWFFFQQVLLIGFTPDA 176
Query: 452 TTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQ 498
TY ++ GL +A + E A ++ + + +P T + +D + +
Sbjct: 177 VTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSK 223
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 96/200 (48%), Gaps = 5/200 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ L R+ +Q LL M + G VM AG E A + E+
Sbjct: 860 YNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMR 919
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVD 254
+ G + T +++ L K ++ LA F E L+ + P+A ++ I +CK ++VD
Sbjct: 920 SRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVD 979
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
+A W + ++ G P + YST++ S C+ K E++ EM+++ C P + +T++
Sbjct: 980 DA-WKL--LRSSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLA 1036
Query: 315 SYLAKSGDFEEAIRITEKMK 334
+ G +EA+++ ++
Sbjct: 1037 TAYVAEGRVDEAVKLVNDLQ 1056
>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
Length = 1007
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 200/411 (48%), Gaps = 7/411 (1%)
Query: 106 LIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGH 164
L H K D SAL +F G E ++ Y +++ L ++++ L+ EM G
Sbjct: 258 LGHCRKHDLDSALQVFNQMAK-EGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGI 316
Query: 165 IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARS 224
+ T +T + G +EDA R F ++ G E N T L+ LC G +++A
Sbjct: 317 LPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIG 376
Query: 225 VFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYC 283
+F + + + PN T+N I+ + R+ A + M +GC P +++Y+ +I+ YC
Sbjct: 377 LFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYC 436
Query: 284 RQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSR 343
+ K +++ M +G N+VTY T++ SG+ A+RI + M+ G KPD
Sbjct: 437 ILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEW 496
Query: 344 FFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEE 403
+ LI + S+++ A ++ EM ++G+ P+ T+ +I + + A +LE
Sbjct: 497 SYTELICGFCKISKMESAFGLFN-EMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEH 555
Query: 404 MNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCR 463
M K C+PNVQT++ L+ K + + ++ L ++ + + ++ TYT +I GLC+
Sbjct: 556 M-KRSGCRPNVQTYNVLIHGLTK--QNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCK 612
Query: 464 ANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
A +F +MI P T ++ + Q+ + AE + A +++
Sbjct: 613 NGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELER 663
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 171/387 (44%), Gaps = 53/387 (13%)
Query: 164 HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELAR 223
H+ L A VM R+ R E G++ N N +++ LCK+G V A
Sbjct: 189 HLSRLGMTAAVMDRYH---------RMLSE----GVQPNLLIYNAVINALCKDGNVADAE 235
Query: 224 SVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSY 282
++ ++ +S + P+ T+ I G C+ + +D A +M GC P ++YST+I
Sbjct: 236 TIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGL 295
Query: 283 CRQYNFSKVYELLDEM-----------------------------------QAQGCPPNV 307
C ++ ++L+ EM + +GC PNV
Sbjct: 296 CDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNV 355
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
TYT ++S L SG + AI + +M G P++ +N LI L R++ A V +
Sbjct: 356 YTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNL 415
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKT 427
M NG +P+ T+N MI + G +KA V+ M + H N+ T++ ++K +
Sbjct: 416 -MGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGH-SANLVTYNTIIKGYCDS 473
Query: 428 GKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
G T L L D++ D +YT +I G C+ +K E A+ LF EM+ + P
Sbjct: 474 GNTTSALRIL--DLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEV 531
Query: 488 TCRLILDEVKQKHMYDAAEKIEAVMKK 514
T ++D + D A + MK+
Sbjct: 532 TYTALIDGYCKDEKLDTATSLLEHMKR 558
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 166/353 (47%), Gaps = 12/353 (3%)
Query: 73 KVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWK-SALGIFRWAGSCPGYE 131
KV +G +F + +D V + L+N L+ + + L + G P
Sbjct: 372 KVAIG-----LFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIV 426
Query: 132 HSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTF 191
+E+ + + + M M +L+ ++VT NTI K + +G A+R
Sbjct: 427 TYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIK---GYCDSGNTTSALRIL 483
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKI 250
D + G + + + L+ CK K+E A +F E+ + PN T+ I G+CK
Sbjct: 484 DLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKD 543
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
++D A ++ MK GC P V +Y+ +I +Q NFS EL M +G PNVVTY
Sbjct: 544 EKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTY 603
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
T ++ L K+G A+ + KM G P+ ++ LI LG+ +V+EA ++ E+
Sbjct: 604 TAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLF-AELE 662
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
+G+ PD T+ MI + G E AF+ L M K C+P + T+ L+K
Sbjct: 663 RHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIK-AGCQPTLWTYGVLIKG 714
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 102/432 (23%), Positives = 181/432 (41%), Gaps = 52/432 (12%)
Query: 87 LKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWA---GSCPGYEHSSEIYEMMV 141
L +D C +P + +LI F +SA G+F G CP + Y ++
Sbjct: 485 LMRDGGC---KPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCP----NEVTYTALI 537
Query: 142 DILGKVRQMDQMRALLEEMSKG----HIVTLNTIAKVMRR---FSGAGQWEDAVRTFDEL 194
D K ++D +LLE M + ++ T N + + + FSGA E+ + E
Sbjct: 538 DGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGA---EELCKVMIEE 594
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINR 252
G F N T ++D LCK G LA +F ++ + C+P N T++ I + +
Sbjct: 595 GIF---PNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLP-NLLTYSSLIRALGQEGK 650
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
V+EA+ E++ HG P I+Y +I++Y + L M GC P + TY
Sbjct: 651 VEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGV 710
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN 372
++ L E + +++ + PD NC + G + Q+AV V ++ E
Sbjct: 711 LIKGLKN-----EYLLADQRLAAL---PDV-VPNC---SFGYQTTDQDAVSVMSAKLAEL 758
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
N +++ S G +A +L M C P+ + ++ LL S + D
Sbjct: 759 DPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLC-PDQEAYNSLLCSLLRVRNVD- 816
Query: 433 CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLI 492
L+ + ++ + + Y +I LC+ ++ + A + F+ M+ P
Sbjct: 817 -LAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNP-------- 867
Query: 493 LDEVKQKHMYDA 504
D+V Q + D
Sbjct: 868 -DDVVQAVLIDG 878
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 6/218 (2%)
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
+ +YS ++ R + V + M ++G PN++ Y V++ L K G+ +A I +
Sbjct: 180 LFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMK 239
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHH 391
K+ PD+ + +I R + A+ V+ +M + G P+T T++T+I
Sbjct: 240 KVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFN-QMAKEGCEPNTVTYSTLINGLCDS 298
Query: 392 GHHEKAFHVLEEMNKLEHCKPNVQT-FHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLD 450
G +AF ++ EM L P T P++ C D +L DM NK +
Sbjct: 299 GRVNEAFDLIREM-ILHGILPTAHTCTGPIIALCDMGCYEDAW--RLFVDMKNK-GCEPN 354
Query: 451 ITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ TYT +I GLC + + A LF M + P T
Sbjct: 355 VYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVT 392
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 77/184 (41%), Gaps = 5/184 (2%)
Query: 153 MRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDT 212
M A L E+ G V + ++ S AG+W +A + + GL + E N LL +
Sbjct: 751 MSAKLAELDPGLSVQVQN--ALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCS 808
Query: 213 LCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHP 270
L + V+LA VF + + C + + + I C+++R EA+ T + M +P
Sbjct: 809 LLRVRNVDLAMGVFKHMSTQGC-EVHLNGYKELICALCQLHRRKEARITFENMLMRTWNP 867
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRIT 330
+ + +I R E L M+ + P+ YT + +K ++
Sbjct: 868 DDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAREASKKRSWKHVAGCI 927
Query: 331 EKMK 334
K+K
Sbjct: 928 TKVK 931
>gi|255660930|gb|ACU25634.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
Length = 484
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 198/389 (50%), Gaps = 14/389 (3%)
Query: 100 HYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEE 159
H LV ++H K+ + AL FRW EH+ EI+ +++ILG+ +++ R +L +
Sbjct: 12 HELVYNVLHGAKNA-EHALQFFRWVERSNLLEHNREIHLKIIEILGRASKLNHARCILLD 70
Query: 160 M-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
M KG + ++ + AG +++V+ F ++ G+E+ ++ + L + + G+
Sbjct: 71 MPKKGLEWDEDMWVMMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVISRRGR 130
Query: 219 VELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
+++ F ++ I P HTFN+ I G+ +V+ A ++MK P VI+Y+T
Sbjct: 131 YMMSKRYFNKMVNEGIEPTRHTFNVLIWGFFLSGKVETANRFFEDMKSREITPDVITYNT 190
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+I Y R + + EM+ + P VVTYTT++ A ++A+R+ E+MK +G
Sbjct: 191 MINGYNRVKKMEEAEKYFLEMKERKIDPTVVTYTTLIKGYASVDRVDDALRLVEEMKGLG 250
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP-DTSTFNTMITMFSHHGHHEK 396
KP++ ++ L+ L A ++ EA + + EM + VAP D S F +I+ G+ +
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMSEARSILK-EMVDKYVAPTDNSIFMRLISSQCKAGNLDA 309
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK-------HHLSL 449
A VL+ M +L + L++ K G+ D+ + +LLD ++ K L +
Sbjct: 310 AADVLKAMIRLS-VPTEAGHYGVLIEYYCKAGQYDKAV-KLLDKLIEKDIILRPQSTLHM 367
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMI 478
+++ Y +I LC + A L ++++
Sbjct: 368 ELSAYNPLIEYLCNNGQTAKAETLVRQLM 396
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 4/203 (1%)
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN 372
++ L ++ A I M G + D + +I + G+A VQE+V ++Q +M E
Sbjct: 51 IIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKAGIVQESVKLFQ-KMEEL 109
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
GV +++ + + S G + + +M E +P TF+ L+ F +GK E
Sbjct: 110 GVERTIKSYDALFKVISRRGRYMMSKRYFNKMVN-EGIEPTRHTFNVLIWGFFLSGKV-E 167
Query: 433 CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLI 492
++ +DM ++ ++ D+ TY +I+G R K E A F EM I P T +
Sbjct: 168 TANRFFEDMKSRE-ITPDVITYNTMINGYNRVKKMEEAEKYFLEMKERKIDPTVVTYTTL 226
Query: 493 LDEVKQKHMYDAAEKIEAVMKKL 515
+ D A ++ MK L
Sbjct: 227 IKGYASVDRVDDALRLVEEMKGL 249
>gi|222641466|gb|EEE69598.1| hypothetical protein OsJ_29150 [Oryza sativa Japonica Group]
Length = 579
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 101/389 (25%), Positives = 168/389 (43%), Gaps = 7/389 (1%)
Query: 117 ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMR 176
+L F +AG PG+ H + ++ + L R +R+LL ++ + + + R
Sbjct: 105 SLRFFLFAGELPGFSHHPDSLLVLANSLAGARLFPLLRSLLSDLPPSAL-SRGLFPLLFR 163
Query: 177 RFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPN 236
+S A EDA+R F + FG + LL L + G VE F E + +
Sbjct: 164 AYSRARLPEDAIRAFSSMAGFGFPPTIADFHSLLFALSRNGLVEYGERFFRESTAQFDVS 223
Query: 237 AHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLD 296
A + I I GW + + + A+ EM G V Y+ +I + CR + + E L
Sbjct: 224 AKAYTILISGWAVVKKPENARSLFDEMVKRGVELDVHVYNALIDALCRGGDITSAQEQLS 283
Query: 297 EMQ-AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
MQ + G PN TY + S D A+R+ ++M P+ +N +I L
Sbjct: 284 NMQKSHGLVPNAATYGPFLHAACASKDVRAALRVLDRMHTHALTPNVFTYNAVIRLLCDL 343
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQ 415
+ EA + E+ G PD ++NT++ KA ++ M+K E C P+
Sbjct: 344 GEINEAYNILD-EITTQGEKPDVWSYNTLLNAHCKLKEVNKALRLISRMDK-ELCPPDRH 401
Query: 416 TFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC-RANKCEWAYLLF 474
+++ LLK G+ D + ++ D M K TY ++IHGL + + E A F
Sbjct: 402 SYNMLLKMLISVGRFDTAI-EVWDGM-EKRGFHPGAATYAVMIHGLASKKGRAEDACSYF 459
Query: 475 KEMIGHDITPRYQTCRLILDEVKQKHMYD 503
M+ I P TC ++ D + + D
Sbjct: 460 VRMVDEGIPPYQATCEVLRDRLLMLGLRD 488
>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 566
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 180/360 (50%), Gaps = 16/360 (4%)
Query: 144 LGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNT 203
+G+ + ++ +LEE G ++ N+ ++ + +G+ E+A+R D + N
Sbjct: 117 IGRTKNATRIMGILEE--SGAVIDANSYNVLINAYCKSGEIEEALRVLDHTS---VAPNA 171
Query: 204 ETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQE 262
T + +L +LC GK++ A V +L+S P+ T + I CK + V +A E
Sbjct: 172 ATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNE 231
Query: 263 MKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGD 322
M+G GC P V++Y+ +I+ +C++ + L ++ + GC +V+++ ++ L G
Sbjct: 232 MRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGR 291
Query: 323 FEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFN 382
+ +A+++ M G P FN LI L + + +A+ V ++ MP++G P++ +FN
Sbjct: 292 WMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEM-MPKHGHTPNSRSFN 350
Query: 383 TMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC---LSQLLD 439
+I F + ++A LE M C P++ T++ LL + K GK D+ LSQL
Sbjct: 351 PLIQGFCNRKGIDRAIEHLEIMVS-RGCYPDIVTYNILLTALCKDGKVDDAVVILSQL-- 407
Query: 440 DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQK 499
+ S + +Y VI GL + K E A L +EM + P TC ++ + ++
Sbjct: 408 ---SSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSRE 464
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 166/347 (47%), Gaps = 7/347 (2%)
Query: 149 QMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN 207
++++ LE M+ KG I + ++R F G+ ++A R L G + + N
Sbjct: 84 ELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDANSYN 143
Query: 208 LLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG 267
+L++ CK G++E A V + + PNA T++ + C ++ +A +
Sbjct: 144 VLINAYCKSGEIEEALRVLDH--TSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSK 201
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
C+P V++ + +I + C++ + +L +EM+ +GC P+VVTY ++ K G +EAI
Sbjct: 202 CYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAI 261
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITM 387
+K+ G + D N ++ +L R +A+ + M G P TFN +I
Sbjct: 262 IFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLAT-MLRKGCFPSVVTFNILINF 320
Query: 388 FSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHL 447
G KA +VLE M K H PN ++F+PL++ D + L+ MV++
Sbjct: 321 LCQKGLLGKALNVLEMMPKHGH-TPNSRSFNPLIQGFCNRKGIDRAIEH-LEIMVSRGCY 378
Query: 448 SLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
DI TY +++ LC+ K + A ++ ++ +P + ++D
Sbjct: 379 P-DIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVID 424
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 136/273 (49%), Gaps = 6/273 (2%)
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KS 231
++R G+W DA++ + G + T N+L++ LC++G + A +V LE+ K
Sbjct: 282 ILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNV-LEMMPKH 340
Query: 232 CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKV 291
PN+ +FN I G+C +D A ++ M GC+P +++Y+ ++ + C+
Sbjct: 341 GHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDA 400
Query: 292 YELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYT 351
+L ++ ++GC P++++Y TV+ L K G E A+ + E+M G KPD ++
Sbjct: 401 VVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGG 460
Query: 352 LGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCK 411
L R +V EA+ + + G+ P+ +N+++ A L +M CK
Sbjct: 461 LSREGKVHEAIKFFHY-LKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVA-NGCK 518
Query: 412 PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK 444
P ++ L+K G +E S+L +++ ++
Sbjct: 519 PTEASYTTLIKGITYEGLAEEA-SKLSNELYSR 550
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 132/277 (47%), Gaps = 16/277 (5%)
Query: 244 IHGWCKINR---VDEAQWTIQEMKGHGCHPCVISYSTIIQSYC---RQYNFSKVYELLDE 297
IH C++ R ++E ++ M G P V++ + +I+ +C R N +++ +L+E
Sbjct: 73 IHHLCRLIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEE 132
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
G + +Y +++ KSG+ EEA+R+ + + P++ ++ ++ +L +
Sbjct: 133 ---SGAVIDANSYNVLINAYCKSGEIEEALRVLDHTSVA---PNAATYDAVLCSLCDRGK 186
Query: 358 VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTF 417
+++A+ V ++ ++ PD T +I +A + EM + + CKP+V T+
Sbjct: 187 LKQAMQVLDRQL-QSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEM-RGKGCKPDVVTY 244
Query: 418 HPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
+ L+K K G+ DE + + + + D+ ++ +++ LC + A L M
Sbjct: 245 NVLIKGFCKEGRLDEAI--IFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATM 302
Query: 478 IGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
+ P T ++++ + QK + A + +M K
Sbjct: 303 LRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPK 339
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 2/168 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +++ L K ++D +L ++S KG +L + V+ G+ E AV +E+
Sbjct: 384 YNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMC 443
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVD 254
GL+ + T ++ L +EGKV A F LK I PNA +N + G CK +
Sbjct: 444 YKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTS 503
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
A + +M +GC P SY+T+I+ + + +L +E+ ++G
Sbjct: 504 LAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEASKLSNELYSRG 551
>gi|255660890|gb|ACU25614.1| pentatricopeptide repeat-containing protein [Glandularia
microphylla]
Length = 484
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 195/389 (50%), Gaps = 14/389 (3%)
Query: 100 HYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEE 159
H LV ++H K + AL FRW +EH+ E + +++ILG+ +++ R +L +
Sbjct: 12 HELVYNVLHSSKTS-EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLD 70
Query: 160 M-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
M KG + ++ + G +++V+ F ++ G+E+ ++ N L + + G+
Sbjct: 71 MPKKGLEWDEDMWVMMIDSYGKQGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGR 130
Query: 219 VELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
+A+ F ++ S I P HTFN+ I G+ +V+ A ++MK P V++Y+T
Sbjct: 131 YMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNT 190
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+I Y R + + EM+ + P VVTYTT++ ++A+R+ E+MK G
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFG 250
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP-DTSTFNTMITMFSHHGHHEK 396
KP++ ++ L+ L A ++ EA + + EM + +AP D S F +I+ G+ +
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMSEARVILK-EMMDKYLAPTDNSIFMRLISSHCKSGNLDA 309
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK-------HHLSL 449
A VL+ M +L + L+++ K G+ D+ + +LLD ++ K L L
Sbjct: 310 AADVLKAMVRLS-VPTEAGHYGVLIENFCKAGQYDKAV-KLLDKLIEKDIILRPQSTLHL 367
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMI 478
+ + Y +I LC + A L ++++
Sbjct: 368 EPSAYNPMIEYLCNNGQAAKAETLVRQLL 396
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 134/311 (43%), Gaps = 4/311 (1%)
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQ 257
E N ET +++ L + K+ AR + L++ K + + + + I + K V E+
Sbjct: 41 FEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKQGIVQESV 100
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
Q+M+ G + SY+ + + R+ + ++M ++G P T+ ++
Sbjct: 101 KMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGF 160
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
SG E A R E MK PD +N +I R +++EA Y VEM + P
Sbjct: 161 FLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEK-YFVEMKGRNIEPT 219
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
T+ T+I + + A ++EEM KPN T+ LL K E +
Sbjct: 220 VVTYTTLIKGYVSVDQVDDALRLVEEMKGF-GIKPNAITYSTLLPGLCNAEKMSEA-RVI 277
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVK 497
L +M++K+ D + + +I C++ + A + K M+ + ++++
Sbjct: 278 LKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMVRLSVPTEAGHYGVLIENFC 337
Query: 498 QKHMYDAAEKI 508
+ YD A K+
Sbjct: 338 KAGQYDKAVKL 348
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 127/267 (47%), Gaps = 6/267 (2%)
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
+ ++++ A+ + +M G + +I SY +Q + ++ +M+ G +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKQGIVQESVKMFQKMEELGVERTIK 116
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
+Y + + + G + A R KM G +P FN +I+ + +V+ A ++ +
Sbjct: 117 SYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFE-D 175
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M ++PD T+NTMI + E+A EM K + +P V T+ L+K
Sbjct: 176 MKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEM-KGRNIEPTVVTYTTLIKGYVSVD 234
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ D+ L +L+++M + + TY+ ++ GLC A K A ++ KEM+ + P +
Sbjct: 235 QVDDAL-RLVEEM-KGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNS 292
Query: 489 C--RLILDEVKQKHMYDAAEKIEAVMK 513
RLI K ++ AA+ ++A+++
Sbjct: 293 IFMRLISSHCKSGNLDAAADVLKAMVR 319
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 5/205 (2%)
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N T+ ++ L ++ A I M G + D + +I + G+ VQE+V ++
Sbjct: 44 NRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKQGIVQESVKMF 103
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
Q +M E GV ++N + + G + A +M E +P TF+ ++ F
Sbjct: 104 Q-KMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLS-EGIEPTRHTFNVMIWGFF 161
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
+GK E ++ +DM ++ +S D+ TY +I+G R K E A F EM G +I P
Sbjct: 162 LSGKV-ETANRFFEDMKSRE-ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPT 219
Query: 486 YQT-CRLILDEVKQKHMYDAAEKIE 509
T LI V + DA +E
Sbjct: 220 VVTYTTLIKGYVSVDQVDDALRLVE 244
>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
Length = 696
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 169/377 (44%), Gaps = 57/377 (15%)
Query: 140 MVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
++D L KV+ MD+ A+L++M HI+ T ++ + +GQW +AVR E+ G
Sbjct: 293 VIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDG 352
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVF-------------------------------- 226
N T ++L+D LCK G AR +F
Sbjct: 353 QRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMN 412
Query: 227 ----LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSY 282
L +++ + P H FNI I+ +CK R+DEA T +M+ G P +++Y+T+I
Sbjct: 413 NVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGL 472
Query: 283 CRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDS 342
C+ +M G P+++T+ T++ A G +E+A + +M G P+
Sbjct: 473 CKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNV 532
Query: 343 RFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLE 402
FN +I L + +V EA ++ + MP G P+ ++NTMI + G + +L+
Sbjct: 533 NTFNSMIDKLFKEGKVTEARKLFDL-MPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLD 591
Query: 403 EMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC 462
+M L KP TF+ LLD MV+ L D+ T +I C
Sbjct: 592 DM-LLIGLKPTAVTFN-----------------TLLDGMVS-MGLKPDVVTCKTLIDSCC 632
Query: 463 RANKCEWAYLLFKEMIG 479
+ E LF+EM+G
Sbjct: 633 EDGRIEDILTLFREMLG 649
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 146/304 (48%), Gaps = 11/304 (3%)
Query: 215 KEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI 273
KEG V A ++F + L IPPN T N I G CK+ +D+A+ +Q+M P
Sbjct: 264 KEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCT 323
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
+Y+++I Y +++ +L EM G PNVVTY+ ++ L KSG EA I M
Sbjct: 324 TYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSM 383
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
G KP++ + L++ + + V + M +NG+ P FN I + G
Sbjct: 384 IQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDL-MVQNGMRPGRHVFNIEIYAYCKCGR 442
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS---QLLDDMVNKHHLSLD 450
++A +M + + P++ + ++ K G+ D+ +S Q++DD LS D
Sbjct: 443 LDEASLTFNKMQQ-QGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDD-----GLSPD 496
Query: 451 ITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEA 510
I T+ +IHG K E A LF EM+ I P T ++D++ ++ A K+
Sbjct: 497 IITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFD 556
Query: 511 VMKK 514
+M +
Sbjct: 557 LMPR 560
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 153/356 (42%), Gaps = 38/356 (10%)
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSC 232
V+ F G A F ++ G+ N T N ++D LCK ++ A +V ++
Sbjct: 258 VIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEH 317
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
I PN T+N IHG+ + EA ++EM G P V++YS +I C+ ++
Sbjct: 318 IMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAR 377
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
E+ + M G PN TY +++ A G+ + + + M G +P FN IY
Sbjct: 378 EIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAY 437
Query: 353 GRASRVQEAVYVYQ----------------------------------VEMPENGVAPDT 378
+ R+ EA + +M ++G++PD
Sbjct: 438 CKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDI 497
Query: 379 STFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLL 438
TFNT+I F+ HG EKA + EM PNV TF+ ++ FK GK E ++ L
Sbjct: 498 ITFNTLIHGFALHGKWEKAEELFYEMMD-RGIPPNVNTFNSMIDKLFKEGKVTE--ARKL 554
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
D++ + ++ +Y +IHG A + L +M+ + P T +LD
Sbjct: 555 FDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLD 610
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 137/316 (43%), Gaps = 37/316 (11%)
Query: 41 IESYCSDGARLDHHQVL--CVDSPRLPDIDVIISKVHVGSSEDEV--FQSLKQDHVCNAI 96
I+ C G + ++ + S + P+ S +H ++E + ++K V N +
Sbjct: 364 IDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGM 423
Query: 97 QPSHYLVNKLIHRF-----KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMD 151
+P ++ N I+ + D+ + G P Y ++D L K+ ++D
Sbjct: 424 RPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVA----YTTVIDGLCKIGRLD 479
Query: 152 QMRA----LLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN 207
+ ++++ I+T NT+ + F+ G+WE A F E+ G+ N T N
Sbjct: 480 DAMSRFCQMIDDGLSPDIITFNTL---IHGFALHGKWEKAEELFYEMMDRGIPPNVNTFN 536
Query: 208 LLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
++D L KEGKV AR +F L ++ PN ++N IHG+ V E + +M
Sbjct: 537 SMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLI 596
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
G P ++++T LLD M + G P+VVT T++ + G E+
Sbjct: 597 GLKPTAVTFNT----------------LLDGMVSMGLKPDVVTCKTLIDSCCEDGRIEDI 640
Query: 327 IRITEKMKIVGSKPDS 342
+ + +M K D+
Sbjct: 641 LTLFREMLGKADKTDT 656
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 84/193 (43%), Gaps = 9/193 (4%)
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
A+ P++ T+ ++S +G ++ G + + F L+ TL R
Sbjct: 137 AKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTS 196
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNK-LEHCKPNVQTFH 418
+A+ + MPE G PD ++ T++ E+A ++ M + ++C PNV ++
Sbjct: 197 DAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYT 256
Query: 419 PLLKSCFK---TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFK 475
++ FK GK ++LD H + ++ T VI GLC+ + A + +
Sbjct: 257 TVIHGFFKEGDVGKAYTLFCKMLD-----HGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQ 311
Query: 476 EMIGHDITPRYQT 488
+MI I P T
Sbjct: 312 QMIDEHIMPNCTT 324
>gi|222631252|gb|EEE63384.1| hypothetical protein OsJ_18196 [Oryza sativa Japonica Group]
Length = 378
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 171/340 (50%), Gaps = 7/340 (2%)
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCI 233
++ F+ AG+ ++AV F+ + T G + E+ N LL L +EG A VF ++
Sbjct: 7 AIKSFAAAGEIKNAVGVFEMMRTHGFDDGVESFNCLLVALAQEGLGREANQVFDRMRDRY 66
Query: 234 PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
P+ ++ + WC + EA EM +G P V+ ++T+I+ R + +
Sbjct: 67 APDLRSYTALMLAWCNARNLVEAGRVWNEMLENGLKPDVVVHNTMIEGLLRGQRRPEAVK 126
Query: 294 LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLG 353
+ + M+A+G PNV TYT ++ K G + A+R E+M+ VG +PD + CL+ G
Sbjct: 127 MFELMKAKGPAPNVWTYTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTCLLVGYG 186
Query: 354 RASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPN 413
A R+ + + EM + G PD T+N +I + ++ + A + ++M K + +P
Sbjct: 187 NAKRMDRVTALLE-EMTQKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMIK-KGLEPT 244
Query: 414 VQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLL 473
+ T++ ++KS F G+ + ++M ++ + D+ +YT+ I+G R + E A
Sbjct: 245 IHTYNMMMKSYFLGGRNYMMGCAVWEEM-HRKGICPDVNSYTVFINGHIRHGRPEEACKY 303
Query: 474 FKEMIGHDI-TPRYQTCRLILDEVKQKH---MYDAAEKIE 509
+EMI + TP+ + D K +Y+ A+K++
Sbjct: 304 IEEMIQKGMKTPQIDYNKFAADFSKAGKPDILYELAQKVK 343
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 117/255 (45%), Gaps = 5/255 (1%)
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
F I I + + A + M+ HG V S++ ++ + ++ + ++ D M
Sbjct: 3 AFKIAIKSFAAAGEIKNAVGVFEMMRTHGFDDGVESFNCLLVALAQEGLGREANQVFDRM 62
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRV 358
+ + P++ +YT +M + + EA R+ +M G KPD N +I L R R
Sbjct: 63 RDR-YAPDLRSYTALMLAWCNARNLVEAGRVWNEMLENGLKPDVVVHNTMIEGLLRGQRR 121
Query: 359 QEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFH 418
EAV ++++ M G AP+ T+ +I G + A EEM + C+P+V T+
Sbjct: 122 PEAVKMFEL-MKAKGPAPNVWTYTMLIRDHCKRGKMDMAMRCFEEMQDV-GCQPDVATYT 179
Query: 419 PLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
LL + K + ++ LL++M K D TY +I L N + A ++K+MI
Sbjct: 180 CLLVG-YGNAKRMDRVTALLEEMTQK-GCPPDGRTYNALIKLLTNRNMPDDAARIYKKMI 237
Query: 479 GHDITPRYQTCRLIL 493
+ P T +++
Sbjct: 238 KKGLEPTIHTYNMMM 252
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 106/244 (43%), Gaps = 11/244 (4%)
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
++ I+S+ + + M+ G V ++ ++ LA+ G EA ++ ++M
Sbjct: 3 AFKIAIKSFAAAGEIKNAVGVFEMMRTHGFDDGVESFNCLLVALAQEGLGREANQVFDRM 62
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
+ + PD R + L+ A + EA V+ EM ENG+ PD NTMI
Sbjct: 63 RDRYA-PDLRSYTALMLAWCNARNLVEAGRVWN-EMLENGLKPDVVVHNTMIEGLLRGQR 120
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD---ECLSQLLDDMVNKHHLSLD 450
+A + E M K + PNV T+ L++ K GK D C ++ D D
Sbjct: 121 RPEAVKMFELM-KAKGPAPNVWTYTMLIRDHCKRGKMDMAMRCFEEMQD-----VGCQPD 174
Query: 451 ITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEA 510
+ TYT ++ G A + + L +EM P +T ++ + ++M D A +I
Sbjct: 175 VATYTCLLVGYGNAKRMDRVTALLEEMTQKGCPPDGRTYNALIKLLTNRNMPDDAARIYK 234
Query: 511 VMKK 514
M K
Sbjct: 235 KMIK 238
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 103/226 (45%), Gaps = 5/226 (2%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
++ M++ L + ++ + + E M +KG + T ++R G+ + A+R F+E+
Sbjct: 107 VHNTMIEGLLRGQRRPEAVKMFELMKAKGPAPNVWTYTMLIRDHCKRGKMDMAMRCFEEM 166
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINR 252
G + + T LL +++ ++ E+ K C PP+ T+N I N
Sbjct: 167 QDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMTQKGC-PPDGRTYNALIKLLTNRNM 225
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSY-CRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
D+A ++M G P + +Y+ +++SY N+ + +EM +G P+V +YT
Sbjct: 226 PDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRNYMMGCAVWEEMHRKGICPDVNSYT 285
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
++ + G EEA + E+M G K +N +A +
Sbjct: 286 VFINGHIRHGRPEEACKYIEEMIQKGMKTPQIDYNKFAADFSKAGK 331
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 84/202 (41%), Gaps = 34/202 (16%)
Query: 145 GKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNT 203
G ++MD++ ALLEEM+ KG T +++ + +DA R + ++ GLE
Sbjct: 186 GNAKRMDRVTALLEEMTQKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTI 245
Query: 204 ETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
T N+++ +S FL ++ ++ G C + W +EM
Sbjct: 246 HTYNMMM------------KSYFLGGRN-----------YMMG-CAV-------W--EEM 272
Query: 264 KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF 323
G P V SY+ I + R + + ++EM +G + Y + +K+G
Sbjct: 273 HRKGICPDVNSYTVFINGHIRHGRPEEACKYIEEMIQKGMKTPQIDYNKFAADFSKAGKP 332
Query: 324 EEAIRITEKMKIVGSKPDSRFF 345
+ + +K+K G S F
Sbjct: 333 DILYELAQKVKFTGKFDASNVF 354
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 107/406 (26%), Positives = 175/406 (43%), Gaps = 41/406 (10%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLN-TIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +V L K R MD+ A L +M ++ N T ++ +S GQW++AVR F E+
Sbjct: 259 YSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMR 318
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVF----------------------------- 226
+ + +N L+ +LCK GK++ AR VF
Sbjct: 319 RQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLV 378
Query: 227 -------LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
L L I P+ +TFN+ I + +D+A EM+ HG P V++Y T+I
Sbjct: 379 DMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVI 438
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
+ CR E ++M QG P+ Y ++ G +A + ++ G +
Sbjct: 439 AALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMR 498
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
D FF +I L + RV +A ++ + + G+ PD +N ++ + G EKA
Sbjct: 499 LDIVFFGSIINNLCKLGRVMDAQNIFDLTV-NVGLHPDAVVYNMLMDGYCLVGKMEKALR 557
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIH 459
V + M +PNV + L+ K G+ DE LS L +M+ K + Y ++I
Sbjct: 558 VFDAMVS-AGIEPNVVGYGTLVNGYCKIGRIDEGLS-LFREMLQK-GIKPSTILYNIIID 614
Query: 460 GLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
GL A + A + F EM I T ++L + + +D A
Sbjct: 615 GLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEA 660
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 169/354 (47%), Gaps = 17/354 (4%)
Query: 170 TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFL-- 227
T A +M + A + E A+ F +L GL + + LL C+ + + A + L
Sbjct: 115 TYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHR 174
Query: 228 --ELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG--CHPCVISYSTIIQSYC 283
EL C+P + ++NI + C + +A ++ M G C P V++Y+T+I +
Sbjct: 175 TPEL-GCVP-DVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFF 232
Query: 284 RQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSR 343
++ + +K +L EM +G PP++VTY++V+ L K+ ++A +M G PD+
Sbjct: 233 KEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNW 292
Query: 344 FFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEE 403
+N LIY + +EAV V++ EM + PD NT++ +G ++A V +
Sbjct: 293 TYNNLIYGYSSTGQWKEAVRVFK-EMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDT 351
Query: 404 MNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLD--DMVNKHHLSLDITTYTLVIHGL 461
M ++ P+V ++ +L G CL + D D++ ++ DI T+ ++I
Sbjct: 352 M-AMKGQNPDVFSYTIMLNGYATKG----CLVDMTDLFDLMLGDGIAPDIYTFNVLIKAY 406
Query: 462 CRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEAVMKK 514
+ A ++F EM H + P T ++ + + M DA EK ++ +
Sbjct: 407 ANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQ 460
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 125/266 (46%), Gaps = 3/266 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G + +Y M++D V +M++ + + M S G + ++ + G+ ++
Sbjct: 531 GLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEG 590
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHG 246
+ F E+ G++ +T N+++D L + G+ A+ F E+ +S I N T++I + G
Sbjct: 591 LSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRG 650
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
K DEA + +E++ +I+ +T+I + + +L + G P
Sbjct: 651 LFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPC 710
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
VTY+ +++ L K G EEA + M+ G +PDSR N ++ L + + + A Y
Sbjct: 711 AVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRA-GAYL 769
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHG 392
++ E + + T ++ +FS G
Sbjct: 770 SKIDERNFSLEHLTAMLLVDLFSSKG 795
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 86/190 (45%), Gaps = 6/190 (3%)
Query: 299 QAQG---CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
+AQG P TY +M ++ E A+ ++ G + D+ + L+ A
Sbjct: 102 RAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEA 161
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH-CKPNV 414
R EA+ + PE G PD ++N ++ + G +A +L M + C P+V
Sbjct: 162 KRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDV 221
Query: 415 QTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLF 474
++ ++ FK G ++ L +MV + + D+ TY+ V+H LC+A + A
Sbjct: 222 VAYNTVIDGFFKEGDVNKA-CDLFKEMVQR-GIPPDLVTYSSVVHALCKARAMDKAEAFL 279
Query: 475 KEMIGHDITP 484
++M+ + P
Sbjct: 280 RQMVNKGVLP 289
>gi|359492929|ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Vitis vinifera]
Length = 513
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 116/427 (27%), Positives = 204/427 (47%), Gaps = 24/427 (5%)
Query: 99 SHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLE 158
SH LI R + D + AL IF G+ H++ Y ++ L K ++ + A+L
Sbjct: 59 SHESAINLIKR-ETDPQRALEIFNRVAEQRGFSHNNATYATILHKLAKSKKFQAIDAVLH 117
Query: 159 EMS----KGH-IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNT-ETMNLLLDT 212
+M+ K H + LN +M+ FS E V FD + EK + + ++ L+
Sbjct: 118 QMTYETCKFHEGIFLN----LMKHFSKLSLHERVVEMFDAIRPIVREKPSLKAISTCLNL 173
Query: 213 LCKEGKVELARSVFLELKSCI--PPNAHTFNIFIHGWCKINRVDEAQWTIQEMK-GHGCH 269
L + +V+L R L K + PN FNI + CK +D A ++EMK H +
Sbjct: 174 LVESNQVDLTRKFLLNSKKSLNLEPNTCIFNILVKHHCKNGDIDSAFEVVEEMKKSHVSY 233
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG-CPPNVVTYTTVMSYLAKSGDFEEAIR 328
P +I+YST+I C + EL +EM ++ P+ +TY +++ + A++
Sbjct: 234 PNLITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNALINGFCHGEKVDRALK 293
Query: 329 ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF 388
I E MK G P+ ++ L+ + R++EA V+ EM G+ PDT + T+I F
Sbjct: 294 IMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFD-EMKSLGLKPDTVGYTTLINFF 352
Query: 389 SHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
G ++A +L++M + C+ + TF+ +L + G+ +E L + + +
Sbjct: 353 CRAGRVDEAMELLKDMRE-NKCRADTVTFNVILGGLCREGRFEEARGML--ERLPYEGVY 409
Query: 449 LDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
L+ +Y +V++ LCR + + A L M+G + P + T +L H+ +A +
Sbjct: 410 LNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATSNELL-----VHLCEAGKVG 464
Query: 509 EAVMKKL 515
+AVM L
Sbjct: 465 DAVMALL 471
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 146/279 (52%), Gaps = 6/279 (2%)
Query: 202 NTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVDEAQWT 259
N T + L++ LC G+++ A +F E+ K I P+A T+N I+G+C +VD A
Sbjct: 235 NLITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNALINGFCHGEKVDRALKI 294
Query: 260 IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK 319
++ MK +GC+P V +YS ++ +C++ + E+ DEM++ G P+ V YTT++++ +
Sbjct: 295 MEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFCR 354
Query: 320 SGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTS 379
+G +EA+ + + M+ + D+ FN ++ L R R +EA + + +P GV + +
Sbjct: 355 AGRVDEAMELLKDMRENKCRADTVTFNVILGGLCREGRFEEARGMLE-RLPYEGVYLNKA 413
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLD 439
++ ++ G +KA ++ M P+ T + LL + GK + + LL
Sbjct: 414 SYRIVLNSLCREGELQKATQLVGLMLG-RGVLPHFATSNELLVHLCEAGKVGDAVMALLG 472
Query: 440 DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
+ + + ++ L++ +CR K A+ L +++
Sbjct: 473 LL--ELGFKPEPNSWALLVELICRERKLLPAFELLDDLV 509
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 104/247 (42%), Gaps = 3/247 (1%)
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ-GCPPNVVTYTTVMSYLAKSGDFEEAIR 328
P IS+ + I R+ + + E+ + + Q G N TY T++ LAKS F+
Sbjct: 55 PKFISHESAINLIKRETDPQRALEIFNRVAEQRGFSHNNATYATILHKLAKSKKFQAIDA 114
Query: 329 ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF 388
+ +M K F L+ + S + V ++ P P +T + +
Sbjct: 115 VLHQMTYETCKFHEGIFLNLMKHFSKLSLHERVVEMFDAIRPIVREKPSLKAISTCLNLL 174
Query: 389 SHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
+ L K + +PN F+ L+K K G D +++++M H
Sbjct: 175 VESNQVDLTRKFLLNSKKSLNLEPNTCIFNILVKHHCKNGDIDSAF-EVVEEMKKSHVSY 233
Query: 449 LDITTYTLVIHGLCRANKCEWAYLLFKEMIGHD-ITPRYQTCRLILDEVKQKHMYDAAEK 507
++ TY+ +I+GLC + + + A LF+EM+ D I P T +++ D A K
Sbjct: 234 PNLITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNALINGFCHGEKVDRALK 293
Query: 508 IEAVMKK 514
I MKK
Sbjct: 294 IMEFMKK 300
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 83/170 (48%), Gaps = 8/170 (4%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y +++ + ++D+ LL++M + VT N I + R G++E+A +
Sbjct: 345 YTTLINFFCRAGRVDEAMELLKDMRENKCRADTVTFNVILGGLCR---EGRFEEARGMLE 401
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARS-VFLELKSCIPPNAHTFNIFIHGWCKIN 251
L G+ N + ++L++LC+EG+++ A V L L + P+ T N + C+
Sbjct: 402 RLPYEGVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATSNELLVHLCEAG 461
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ 301
+V +A + + G P S++ +++ CR+ +ELLD++ Q
Sbjct: 462 KVGDAVMALLGLLELGFKPEPNSWALLVELICRERKLLPAFELLDDLVIQ 511
>gi|297826581|ref|XP_002881173.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327012|gb|EFH57432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 917
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 108/425 (25%), Positives = 202/425 (47%), Gaps = 16/425 (3%)
Query: 78 SSEDEVFQSLK---QDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEH-S 133
S +DE+F SL + +C + Y++ +L +R + D A+G + +A ++
Sbjct: 176 SGDDEMFHSLMLSFESKLCGS-DDCTYIIRELGNRGECD--KAVGFYEFAVKRERRKNEQ 232
Query: 134 SEIYEMMVDILGKVRQMDQMRALLE-EMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
++ M+ LG+ ++ + + E S G+ T+ + ++ + +G E+A+ F+
Sbjct: 233 GKLASAMISTLGRYGKVTIAKRIFETAFSGGYGNTVYAFSALISAYGRSGLHEEAISVFN 292
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELAR--SVFLEL-KSCIPPNAHTFNIFIHGWCK 249
+ +GL N T N ++D C +G +E + F E+ ++C+ P+ TFN + +
Sbjct: 293 SMKEYGLRPNLVTYNAVIDA-CGKGGMEFKQVAKFFDEMQRNCVQPDRITFNSLLAVCSR 351
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
+ A+ EM V SY+T++ + C+ +E+L +M A+ PNVV+
Sbjct: 352 GGLWEAARNLFDEMSNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVS 411
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM 369
Y+TV+ AK+G F+EA+ + +M+ + D +N L+ + R +EA+ + + EM
Sbjct: 412 YSTVIDGFAKAGRFDEALNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDILR-EM 470
Query: 370 PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
G+ D T+N ++ + G +++ V EM K EH PN+ T+ L+ K G
Sbjct: 471 ASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEM-KREHVLPNLLTYSTLIDGYSKGGL 529
Query: 430 TDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTC 489
E + + L D+ Y+ +I LC+ A L EM I+P T
Sbjct: 530 YKEAMEVFRE--FKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTY 587
Query: 490 RLILD 494
I+D
Sbjct: 588 NSIID 592
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 115/469 (24%), Positives = 198/469 (42%), Gaps = 39/469 (8%)
Query: 62 PRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDD--WKSALG 119
P L + +I G E + + N +QP N L+ W++A
Sbjct: 301 PNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNCVQPDRITFNSLLAVCSRGGLWEAARN 360
Query: 120 IFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRF 178
+F S E Y ++D + K QMD +L +M I+ + + + V+ F
Sbjct: 361 LFDEM-SNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGF 419
Query: 179 SGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNA 237
+ AG++++A+ F E+ + + + N LL K G+ E A + E+ S I +
Sbjct: 420 AKAGRFDEALNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDV 479
Query: 238 HTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDE 297
T+N + G+ K + DE + EMK P +++YST+I Y + + + E+ E
Sbjct: 480 VTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFRE 539
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
++ G +VV Y+ ++ L K+G A+ + ++M G P+ +N +I GR++
Sbjct: 540 FKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSAT 599
Query: 358 VQEAV-YVYQVEMPENGVAPD-----------------TSTFNTMITMFSHHGHHEKA-- 397
++ + Y +P + A TS N +T G E +
Sbjct: 600 MERSADYSNGGSLPFSSSALSELTETEGNRVIQLFGQLTSEGNNRMTKDCKEGMQELSCI 659
Query: 398 FHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLV 457
V +M++LE KPNV TF +L +C + ++ S LL+++ D Y V
Sbjct: 660 LEVFRKMHQLE-IKPNVVTFSAILNACSRCNSFEDA-SMLLEEL-----RLFDNKVYG-V 711
Query: 458 IHGLC---RANKCEWAYLLF---KEMIGHDITPRYQTCRLILDEVKQKH 500
+HGL R N A LF EM G + Y +L QK
Sbjct: 712 VHGLLMGQRENVWLQAQSLFDKVNEMDGSTASAFYNALTDMLWHFGQKR 760
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 115/249 (46%), Gaps = 5/249 (2%)
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSG-DFEE 325
G V ++S +I +Y R + + + M+ G PN+VTY V+ K G +F++
Sbjct: 263 GYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQ 322
Query: 326 AIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMI 385
+ ++M+ +PD FN L+ R + A ++ EM + D ++NT++
Sbjct: 323 VAKFFDEMQRNCVQPDRITFNSLLAVCSRGGLWEAARNLFD-EMSNRRIEQDVFSYNTLL 381
Query: 386 TMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKH 445
G + AF +L +M + PNV ++ ++ K G+ DE L+ L +M
Sbjct: 382 DAICKGGQMDLAFEILAQM-PAKRIMPNVVSYSTVIDGFAKAGRFDEALN-LFGEM-RYL 438
Query: 446 HLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
+++LD +Y ++ + + E A + +EM I T +L ++ YD
Sbjct: 439 NIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEV 498
Query: 506 EKIEAVMKK 514
+K+ A MK+
Sbjct: 499 KKVFAEMKR 507
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 94/207 (45%), Gaps = 7/207 (3%)
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
+ ++S L + G A RI E G F+ LI GR+ +EA+ V+ M
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFSGGYGNTVYAFSALISAYGRSGLHEEAISVFN-SMK 295
Query: 371 ENGVAPDTSTFNTMITMFSHHG-HHEKAFHVLEEMNKLEHC-KPNVQTFHPLLKSCFKTG 428
E G+ P+ T+N +I G ++ +EM + +C +P+ TF+ LL C + G
Sbjct: 296 EYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQR--NCVQPDRITFNSLLAVCSRGG 353
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
E L D+M N+ + D+ +Y ++ +C+ + + A+ + +M I P +
Sbjct: 354 LW-EAARNLFDEMSNRR-IEQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVS 411
Query: 489 CRLILDEVKQKHMYDAAEKIEAVMKKL 515
++D + +D A + M+ L
Sbjct: 412 YSTVIDGFAKAGRFDEALNLFGEMRYL 438
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 194/398 (48%), Gaps = 24/398 (6%)
Query: 104 NKLIHRFKDDWKSALGIFRWAGSCPGYEHSS-----------EIYEMMVDILGKVRQMDQ 152
N+ +HR S LG + + P + H S + ++ ++ L ++ +D
Sbjct: 12 NRFVHR------SLLGKGKCGTAPPSFSHCSFWVRDFSGVRYDYRKISINRLNDLK-LDD 64
Query: 153 MRALLEEMSKGH-IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLD 211
L +M K ++ +K++ + +++ + +++ G+ N T ++L++
Sbjct: 65 AVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILIN 124
Query: 212 TLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHP 270
C+ ++ LA +V ++ K P+ T N ++G+C NR+ +A + +M G P
Sbjct: 125 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQP 184
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRIT 330
+++T+I R S+ L+D M +GC P++VTY V++ L K GD + A+ +
Sbjct: 185 DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLL 244
Query: 331 EKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSH 390
+KM+ +P +N +I L V +A+ ++ EM G+ P+ T+N++I +
Sbjct: 245 KKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLF-TEMDNKGIRPNVVTYNSLIRCLCN 303
Query: 391 HGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLD 450
+G A +L +M + PNV TF L+ + K GK E +L D+M+ K + D
Sbjct: 304 YGRWSDASRLLSDMIE-RKINPNVVTFSALIDAFVKEGKLVEA-EKLYDEMI-KRSIDPD 360
Query: 451 ITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
I TY+ +I+G C ++ + A +F+ MI D P T
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 398
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 177/364 (48%), Gaps = 21/364 (5%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEM-SKG---HIVTLNTIAKVMRRFSGAGQWEDAVRTF 191
IY ++D L + ++ L EM +KG ++VT N++ + + + G+W DA R
Sbjct: 258 IYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY---GRWSDASRLL 314
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKI 250
++ + N T + L+D KEGK+ A ++ E+ K I P+ T++ I+G+C
Sbjct: 315 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 374
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
+R+DEA+ + M C P V++Y+T+I+ +C+ + EL EM +G N VTY
Sbjct: 375 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTY 434
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
TT++ ++ + + A + ++M G PD ++ L+ L +V+ A+ V++ +
Sbjct: 435 TTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEY-LQ 493
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKT 430
+ + PD T+N MI G E + + ++ L+ KPNV T+ ++ + G
Sbjct: 494 RSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS-LKGVKPNVVTYTTMMSGFCRKGLK 552
Query: 431 DECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCR 490
+E L +M + L D TY +I R + L +EM ++CR
Sbjct: 553 EEA-DALFREMKEEGPLP-DSGTYNTLIRAHLRDGDKAASAELIREM---------RSCR 601
Query: 491 LILD 494
+ D
Sbjct: 602 FVGD 605
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 179/388 (46%), Gaps = 6/388 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDA 187
GY+ S + ++ L + + + AL++ M KG L T V+ G + A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHG 246
+ ++ +E N ++D LC V A ++F E+ + I PN T+N I
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C R +A + +M +P V+++S +I ++ ++ + +L DEM + P+
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
+ TY+++++ +EA + E M P+ +N LI +A RV E + +++
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
EM + G+ +T T+ T+I F + A V ++M + P++ T+ LL
Sbjct: 421 -EMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVS-DGVLPDIMTYSILLDGLCN 478
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
GK + L ++ + + + + DI TY ++I G+C+A K E + LF + + P
Sbjct: 479 NGKVETAL--VVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 536
Query: 487 QTCRLILDEVKQKHMYDAAEKIEAVMKK 514
T ++ +K + + A+ + MK+
Sbjct: 537 VTYTTMMSGFCRKGLKEEADALFREMKE 564
>gi|356556194|ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 829
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 109/445 (24%), Positives = 204/445 (45%), Gaps = 56/445 (12%)
Query: 113 DWKSALGIFRWA----GSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVT 167
+W+ AL +F W GS +++ E+MV ILG+ Q L + + + + +
Sbjct: 155 NWERALLLFEWGWLHFGSDQNLRLDNQVVELMVRILGRESQHSIASKLFDLIPVEKYSLD 214
Query: 168 LNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK------------ 215
+ ++ ++ G+++ A+ F ++ GL+ T N++LD K
Sbjct: 215 VRAYTTILHSYARTGKYKRAIDLFGKMKEIGLDPTLVTYNVMLDVYGKMGRSWDRILELL 274
Query: 216 ------------------------EGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKI 250
EG ++ AR ELK + P T+N + + K
Sbjct: 275 DEMRSKGLELDEFTCSTVISACGREGMLDEARKFLAELKFNGYKPGTVTYNSMLQVFGKA 334
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
EA ++EM+ + C P ++Y+ + +Y R + ++D M ++G PN +TY
Sbjct: 335 GIYTEALSILKEMEDNNCPPDSVTYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITY 394
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
TTV+ K+G ++A+R+ MK +G P+ +N ++ LG+ SR ++ + V EM
Sbjct: 395 TTVIDAYGKAGREDDALRLFSLMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVL-CEMK 453
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHC--KPNVQTFHPLLKSCFKTG 428
NG AP+ +T+NTM+ + S G H VL EM ++C +P+ TF+ L+ + + G
Sbjct: 454 LNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREM---KNCGFEPDKDTFNTLISAYARCG 510
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ +++ +MV K + +TTY +++ L R + A + ++M P +
Sbjct: 511 SEVDS-AKMYGEMV-KSGFTPCVTTYNALLNALARRGDWKAAESVIQDMRTKGFKPNENS 568
Query: 489 CRLILDEVKQKHMYDAAEKIEAVMK 513
L+L H Y A ++ + K
Sbjct: 569 YSLLL------HCYSKAGNVKGIEK 587
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 142/318 (44%), Gaps = 7/318 (2%)
Query: 120 IFRWAGSCPGYEHSSEIYEMMVDILGKV-RQMDQMRALLEEMSKGHIVTLNTIAKVMRRF 178
+ R +C G+E + + ++ + ++D + E + G + T ++
Sbjct: 483 VLREMKNC-GFEPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNAL 541
Query: 179 SGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNA 237
+ G W+ A ++ T G + N + +LLL K G V+ V E+ + P+
Sbjct: 542 ARRGDWKAAESVIQDMRTKGFKPNENSYSLLLHCYSKAGNVKGIEKVEKEIYDGHVFPSW 601
Query: 238 HTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDE 297
+ K + + +++ +G P ++ ++++ + R FSK E+L
Sbjct: 602 ILLRTLVLTNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFARNKMFSKAREMLHF 661
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
+ G PN+ TY +M + G+ +A + + ++ G +PD +N +I R
Sbjct: 662 IHECGLQPNLFTYNCLMDLYVREGECWKAEEVLKGIQNSGPEPDVVSYNTVIKGFCRKGL 721
Query: 358 VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH-CKPNVQT 416
+QEA+ V EM G+ P T+NT ++ ++ ++A V+ M +EH C+P+ T
Sbjct: 722 MQEAIGVLS-EMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFM--IEHNCRPSELT 778
Query: 417 FHPLLKSCFKTGKTDECL 434
+ L+ K GK +E +
Sbjct: 779 YKILVDGYCKAGKYEEAM 796
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 153/334 (45%), Gaps = 8/334 (2%)
Query: 167 TLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF 226
T NT+ R G D+ + + E+ G T N LL+ L + G + A SV
Sbjct: 498 TFNTLISAYAR---CGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALARRGDWKAAESVI 554
Query: 227 LELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQ 285
++++ PN +++++ +H + K V + +E+ P I T++ + +
Sbjct: 555 QDMRTKGFKPNENSYSLLLHCYSKAGNVKGIEKVEKEIYDGHVFPSWILLRTLVLTNHKC 614
Query: 286 YNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFF 345
+ + D++Q G P++V +++S A++ F +A + + G +P+ +
Sbjct: 615 RHLRGMERAFDQLQKYGYKPDLVVINSMLSMFARNKMFSKAREMLHFIHECGLQPNLFTY 674
Query: 346 NCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMN 405
NCL+ R +A V + + +G PD ++NT+I F G ++A VL EM
Sbjct: 675 NCLMDLYVREGECWKAEEVLK-GIQNSGPEPDVVSYNTVIKGFCRKGLMQEAIGVLSEMT 733
Query: 406 KLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRAN 465
+ +P + T++ L DE ++++ M+ +H+ TY +++ G C+A
Sbjct: 734 T-KGIQPTIVTYNTFLSGYAGMELFDEA-NEVIRFMI-EHNCRPSELTYKILVDGYCKAG 790
Query: 466 KCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQK 499
K E A ++ DI+ Q+ + + ++++
Sbjct: 791 KYEEAMDFVSKIKELDISFDDQSVKRLGSCIRER 824
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 136/309 (44%), Gaps = 17/309 (5%)
Query: 65 PDID----VIISKVHVGSSED--EVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSAL 118
PD D +I + GS D +++ + + + + L+N L R DWK+A
Sbjct: 494 PDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALARR--GDWKAAE 551
Query: 119 GIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI----VTLNTIAKV 174
+ + G++ + Y +++ K + + + +E+ GH+ + L T+
Sbjct: 552 SVIQ-DMRTKGFKPNENSYSLLLHCYSKAGNVKGIEKVEKEIYDGHVFPSWILLRTLVLT 610
Query: 175 MRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-I 233
+ E R FD+L +G + + +N +L + AR + + C +
Sbjct: 611 NHKCRHLRGME---RAFDQLQKYGYKPDLVVINSMLSMFARNKMFSKAREMLHFIHECGL 667
Query: 234 PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
PN T+N + + + +A+ ++ ++ G P V+SY+T+I+ +CR+ +
Sbjct: 668 QPNLFTYNCLMDLYVREGECWKAEEVLKGIQNSGPEPDVVSYNTVIKGFCRKGLMQEAIG 727
Query: 294 LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLG 353
+L EM +G P +VTY T +S A F+EA + M +P + L+
Sbjct: 728 VLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSELTYKILVDGYC 787
Query: 354 RASRVQEAV 362
+A + +EA+
Sbjct: 788 KAGKYEEAM 796
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 89/191 (46%), Gaps = 2/191 (1%)
Query: 146 KVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTE 204
K R + M +++ K G+ L I ++ F+ + A + GL+ N
Sbjct: 613 KCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFARNKMFSKAREMLHFIHECGLQPNLF 672
Query: 205 TMNLLLDTLCKEGKVELARSVFLELKSCIP-PNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
T N L+D +EG+ A V +++ P P+ ++N I G+C+ + EA + EM
Sbjct: 673 TYNCLMDLYVREGECWKAEEVLKGIQNSGPEPDVVSYNTVIKGFCRKGLMQEAIGVLSEM 732
Query: 264 KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF 323
G P +++Y+T + Y F + E++ M C P+ +TY ++ K+G +
Sbjct: 733 TTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSELTYKILVDGYCKAGKY 792
Query: 324 EEAIRITEKMK 334
EEA+ K+K
Sbjct: 793 EEAMDFVSKIK 803
>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
Length = 532
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 105/377 (27%), Positives = 170/377 (45%), Gaps = 57/377 (15%)
Query: 140 MVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
++D L KV+ MD+ A+L++M HI+ T ++ + +GQW +AVR E+ G
Sbjct: 162 VIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDG 221
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVF-------------------------------- 226
N T N+L+D LCK G AR +F
Sbjct: 222 QRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMN 281
Query: 227 ----LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSY 282
L +++ + N HTF+I I+ +CK R+DEA T +M+ G P +++Y+T+I
Sbjct: 282 NVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGL 341
Query: 283 CRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDS 342
C+ +M G PN++T+TT++ + G +E+A + +M G PD
Sbjct: 342 CKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDV 401
Query: 343 RFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLE 402
F +I L + +V EA ++ + MP G P+ ++NTMI + G + +L+
Sbjct: 402 TIFTAMIDRLFKEGKVTEAQKLFDL-MPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLD 460
Query: 403 EMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC 462
+M L KP TF+ LLD MV+ L D+ T +I C
Sbjct: 461 DM-LLIGLKPTAVTFN-----------------TLLDGMVS-MGLKPDVDTCKTLIDSCC 501
Query: 463 RANKCEWAYLLFKEMIG 479
+ E LF+EM+G
Sbjct: 502 EDGRIEDILTLFREMLG 518
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 147/304 (48%), Gaps = 11/304 (3%)
Query: 215 KEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI 273
KEG V A ++F + L IPPN T N I G CK+ +D+A+ +Q+M P
Sbjct: 133 KEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCT 192
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
+Y+++I Y +++ +L EM G PNVVTY ++ L KSG EA I M
Sbjct: 193 TYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSM 252
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
G KPD+ + L++ + E V + M +NG+ + TF+ I + G
Sbjct: 253 IQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDL-MVQNGMRSNHHTFSIEIYAYCKCGR 311
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS---QLLDDMVNKHHLSLD 450
++A +M +L P++ T+ ++ K G+ D+ +S Q++DD LS +
Sbjct: 312 LDEASLTFIKMQQLGF-MPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDD-----GLSPN 365
Query: 451 ITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEA 510
I T+T +IHG K E A LF EM+ I P ++D + ++ A+K+
Sbjct: 366 IITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFD 425
Query: 511 VMKK 514
+M +
Sbjct: 426 LMPR 429
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 155/359 (43%), Gaps = 40/359 (11%)
Query: 172 AKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-K 230
+ V+ F G A F ++ G+ N T N ++D LCK ++ A +V ++
Sbjct: 125 STVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMID 184
Query: 231 SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSK 290
I PN T+N IHG+ + EA ++EM G P V++Y+ +I C+ ++
Sbjct: 185 EHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAE 244
Query: 291 VYELLDEMQAQGCPPNVVTYTTVMSYLA-------------------------------- 318
E+ + M G P+ TY +++ A
Sbjct: 245 AREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIY 304
Query: 319 ---KSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
K G +EA KM+ +G PD + +I L + R+ +A+ + +M ++G++
Sbjct: 305 AYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRF-CQMIDDGLS 363
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS 435
P+ TF T+I FS +G EKA + EM P+V F ++ FK GK E +
Sbjct: 364 PNIITFTTLIHGFSMYGKWEKAEELFYEMMD-RGIPPDVTIFTAMIDRLFKEGKVTE--A 420
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
Q L D++ + ++ +Y +IHG A + L +M+ + P T +LD
Sbjct: 421 QKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLD 479
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 94/216 (43%), Gaps = 18/216 (8%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQ-MRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G+ Y ++D L K+ ++D M + + G + T ++ FS G+WE A
Sbjct: 326 GFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKA 385
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHG 246
F E+ G+ + ++D L KEGKV A+ +F L ++ PN ++N IHG
Sbjct: 386 EELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHG 445
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
+ V E + +M G P ++++T LLD M + G P+
Sbjct: 446 YFIAGEVGEVMKLLDDMLLIGLKPTAVTFNT----------------LLDGMVSMGLKPD 489
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDS 342
V T T++ + G E+ + + +M K D+
Sbjct: 490 VDTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDT 525
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 86/193 (44%), Gaps = 9/193 (4%)
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
A+ P++ T+ ++S +G ++ G + D+ F L+ TL R
Sbjct: 6 AKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTS 65
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNK-LEHCKPNVQTFH 418
+A+ + MPE G PD +++T++ E+A ++ M + ++C P+V ++
Sbjct: 66 DAMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYS 125
Query: 419 PLLKSCFK---TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFK 475
++ FK GK ++LD H + ++ T VI GLC+ + A + +
Sbjct: 126 TVIHGFFKEGDVGKAYTLFCKMLD-----HGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQ 180
Query: 476 EMIGHDITPRYQT 488
+MI I P T
Sbjct: 181 QMIDEHIMPNCTT 193
>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
Length = 918
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 200/411 (48%), Gaps = 7/411 (1%)
Query: 106 LIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGH 164
L H K D SAL +F G E ++ Y +++ L ++++ L+ EM G
Sbjct: 258 LGHCRKHDLDSALQVFNQMAK-EGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGI 316
Query: 165 IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARS 224
+ T +T + G +EDA R F ++ G E N T L+ LC G +++A
Sbjct: 317 LPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIG 376
Query: 225 VFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYC 283
+F + + + PN T+N I+ + R+ A + M +GC P +++Y+ +I+ YC
Sbjct: 377 LFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYC 436
Query: 284 RQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSR 343
+ K +++ M +G N+VTY T++ SG+ A+RI + M+ G KPD
Sbjct: 437 ILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEW 496
Query: 344 FFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEE 403
+ LI + S+++ A ++ EM ++G+ P+ T+ +I + + A +LE
Sbjct: 497 SYTELICGFCKISKMESAFGLFN-EMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEH 555
Query: 404 MNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCR 463
M K C+PNVQT++ L+ K + + ++ L ++ + + ++ TYT +I GLC+
Sbjct: 556 M-KRSGCRPNVQTYNVLIHGLTK--QNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCK 612
Query: 464 ANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
A +F +MI P T ++ + Q+ + AE + A +++
Sbjct: 613 NGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELER 663
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 171/387 (44%), Gaps = 53/387 (13%)
Query: 164 HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELAR 223
H+ L A VM R+ R E G++ N N +++ LCK+G V A
Sbjct: 189 HLSRLGMTAAVMDRYH---------RMLSE----GVQPNLLIYNAVINALCKDGNVADAE 235
Query: 224 SVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSY 282
++ ++ +S + P+ T+ I G C+ + +D A +M GC P ++YST+I
Sbjct: 236 TIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGL 295
Query: 283 CRQYNFSKVYELLDEM-----------------------------------QAQGCPPNV 307
C ++ ++L+ EM + +GC PNV
Sbjct: 296 CDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNV 355
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
TYT ++S L SG + AI + +M G P++ +N LI L R++ A V +
Sbjct: 356 YTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNL 415
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKT 427
M NG +P+ T+N MI + G +KA V+ M + H N+ T++ ++K +
Sbjct: 416 -MGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGH-SANLVTYNTIIKGYCDS 473
Query: 428 GKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
G T L L D++ D +YT +I G C+ +K E A+ LF EM+ + P
Sbjct: 474 GNTTSALRIL--DLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEV 531
Query: 488 TCRLILDEVKQKHMYDAAEKIEAVMKK 514
T ++D + D A + MK+
Sbjct: 532 TYTALIDGYCKDEKLDTATSLLEHMKR 558
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 167/355 (47%), Gaps = 12/355 (3%)
Query: 71 ISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWK-SALGIFRWAGSCPG 129
I KV +G +F + +D V + L+N L+ + + L + G P
Sbjct: 370 ILKVAIG-----LFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPN 424
Query: 130 YEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVR 189
+E+ + + + M M +L+ ++VT NTI K + +G A+R
Sbjct: 425 IVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIK---GYCDSGNTTSALR 481
Query: 190 TFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWC 248
D + G + + + L+ CK K+E A +F E+ + PN T+ I G+C
Sbjct: 482 ILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYC 541
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
K ++D A ++ MK GC P V +Y+ +I +Q NFS EL M +G PNVV
Sbjct: 542 KDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVV 601
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
TYT ++ L K+G A+ + KM G P+ ++ LI LG+ +V+EA ++ E
Sbjct: 602 TYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLF-AE 660
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
+ +G+ PD T+ MI + G E AF+ L M K C+P + T+ L+K
Sbjct: 661 LERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIK-AGCQPTLWTYGVLIKG 714
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 102/432 (23%), Positives = 181/432 (41%), Gaps = 52/432 (12%)
Query: 87 LKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWA---GSCPGYEHSSEIYEMMV 141
L +D C +P + +LI F +SA G+F G CP + Y ++
Sbjct: 485 LMRDGGC---KPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCP----NEVTYTALI 537
Query: 142 DILGKVRQMDQMRALLEEMSKG----HIVTLNTIAKVMRR---FSGAGQWEDAVRTFDEL 194
D K ++D +LLE M + ++ T N + + + FSGA E+ + E
Sbjct: 538 DGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGA---EELCKVMIEE 594
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINR 252
G F N T ++D LCK G LA +F ++ + C+P N T++ I + +
Sbjct: 595 GIF---PNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLP-NLLTYSSLIRALGQEGK 650
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
V+EA+ E++ HG P I+Y +I++Y + L M GC P + TY
Sbjct: 651 VEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGV 710
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN 372
++ L E + +++ + PD NC + G + Q+AV V ++ E
Sbjct: 711 LIKGLKN-----EYLLADQRLAAL---PDV-VPNC---SFGYQTTDQDAVSVMSAKLAEL 758
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
N +++ S G +A +L M C P+ + ++ LL S + D
Sbjct: 759 DPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLC-PDQEAYNSLLCSLLRVRNVD- 816
Query: 433 CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLI 492
L+ + ++ + + Y +I LC+ ++ + A + F+ M+ P
Sbjct: 817 -LAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNP-------- 867
Query: 493 LDEVKQKHMYDA 504
D+V Q + D
Sbjct: 868 -DDVVQAVLIDG 878
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 102/229 (44%), Gaps = 6/229 (2%)
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
G + +YS ++ R + V + M ++G PN++ Y V++ L K G+ +A
Sbjct: 175 GLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADA 234
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
I +K+ PD+ + +I R + A+ V+ +M + G P+T T++T+I
Sbjct: 235 ETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFN-QMAKEGCEPNTVTYSTLIN 293
Query: 387 MFSHHGHHEKAFHVLEEMNKLEHCKPNVQT-FHPLLKSCFKTGKTDECLSQLLDDMVNKH 445
G +AF ++ EM L P T P++ C D +L DM NK
Sbjct: 294 GLCDSGRVNEAFDLIREM-ILHGILPTAHTCTGPIIALCDMGCYEDAW--RLFVDMKNK- 349
Query: 446 HLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
++ TYT +I GLC + + A LF M + P T +++
Sbjct: 350 GCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALIN 398
>gi|212274591|ref|NP_001130971.1| GTP binding protein [Zea mays]
gi|194690592|gb|ACF79380.1| unknown [Zea mays]
gi|413947420|gb|AFW80069.1| GTP binding protein [Zea mays]
Length = 535
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 101/401 (25%), Positives = 189/401 (47%), Gaps = 18/401 (4%)
Query: 106 LIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGH- 164
++ + + +W+ AL F WA + PGY H S Y M+DILG+++++ MR L +E+ +
Sbjct: 116 VLQKQRSNWQVALAFFNWAATLPGYAHGSRAYTEMLDILGRMKKVRHMRQLFDEIPEERR 175
Query: 165 --IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELA 222
+VT A ++ R++GA + ++A+ F +G E + +LL +LC+ VE A
Sbjct: 176 QVVVTNKMFAVLLNRYAGAHKVQEAIEVFYLRKDYGFELDLVGFQILLMSLCRYKHVEEA 235
Query: 223 RSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSY 282
++F E K P ++NI ++GWC + +AQ ++ + ++ T I +
Sbjct: 236 EALFREKKDEFPHVTKSWNIILNGWCVKGSLRDAQRIWNDIIASKVERDLFTFGTFINAL 295
Query: 283 CRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDS 342
+ S +L +M +G P+V ++ L EA+ I +M + D
Sbjct: 296 AKNGRISAAVKLFKQMWEKGINPDVAICNCIIDQLCFKKKIPEALEIFGEMNDRLCQADV 355
Query: 343 RFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLE 402
+N LI + + R+ E VY +M G P+ T++ ++ EK V+
Sbjct: 356 ATYNTLIKYMCKIKRM-EKVYELLDDMEAKGCPPNNRTYSYILKT------TEKPKDVIA 408
Query: 403 EMNKLEH--CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHG 460
M ++E CK + ++ L+ + + K ++ + Q+ D+M + D ++T+++HG
Sbjct: 409 LMQRMERTGCKLDSDIYN-LILNLYIKWKYEKGMQQIWDEM-ERRGSGPDQRSFTIMVHG 466
Query: 461 LCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHM 501
L K + A + M + P +T L VK HM
Sbjct: 467 LHSQGKLDEALQYYTTMKSRGMIPEPRTKIL----VKAMHM 503
>gi|115448805|ref|NP_001048182.1| Os02g0759500 [Oryza sativa Japonica Group]
gi|46805701|dbj|BAD17102.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47497356|dbj|BAD19395.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537713|dbj|BAF10096.1| Os02g0759500 [Oryza sativa Japonica Group]
gi|125583759|gb|EAZ24690.1| hypothetical protein OsJ_08460 [Oryza sativa Japonica Group]
gi|215704115|dbj|BAG92955.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215766866|dbj|BAG99094.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 555
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 185/404 (45%), Gaps = 31/404 (7%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILG----KVRQMDQMRALL 157
LV ++HR + D K A F WA GYEH + Y ++DIL K RQ + +L
Sbjct: 114 LVADVLHRLRYDEKLAFRFFVWASHQDGYEHEAATYNDVIDILSGTRYKARQFGVLCDVL 173
Query: 158 EEMSKGHI--VTLNTIAKVMRRFSG---------AGQWEDAVRTFDELGTFGLEKNTETM 206
+ M + V ++ + ++R ++ A + +RT E T+ +
Sbjct: 174 DHMKRRRTRSVPVDDLLGILRAYTEKHLTHLRKLAKKRRVRMRTPPE---------TDAL 224
Query: 207 NLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
N+LLD CK G V A VF +K + NA T++I GWC+ A ++EM
Sbjct: 225 NVLLDAFCKCGMVREAEVVFSRVKRKLLGNAETYSILFFGWCRARDPKRAMKVLEEMIQM 284
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG---CPPNVVTYTTVMSYLAKSGDF 323
P +Y+ I S+C S+ +L + M+ +G P TY+ +++ LAK+G
Sbjct: 285 KHTPENFTYNAAIDSFCSAGLVSEARDLFEFMRTEGSTISSPTAKTYSIMIAALAKAGQM 344
Query: 324 EEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNT 383
EE + +M+ G PD + LI + ++ +A Y EM + G PD T+N
Sbjct: 345 EECFELISEMRKCGCMPDVSTYKDLIEGMLLVDKL-DAAYCVLDEMAKAGFPPDIVTYNC 403
Query: 384 MITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVN 443
+ + + A + E M + HC+P+V T++ L+ F+ + D ++ ++ ++
Sbjct: 404 FLKVLCGLQKADDALELCERMIE-AHCEPSVHTYNMLMVMFFEMREPDRAINIWIE--MD 460
Query: 444 KHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
K + TY +I GL + + E A L E+I + Y+
Sbjct: 461 KRGCHRAVDTYETMIDGLFDSGRTEDATALLDEVINRGMKLSYK 504
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 98/222 (44%), Gaps = 5/222 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIV---TLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y +D + + R L E M ++G + T T + ++ + AGQ E+
Sbjct: 293 YNAAIDSFCSAGLVSEARDLFEFMRTEGSTISSPTAKTYSIMIAALAKAGQMEECFELIS 352
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKIN 251
E+ G + T L++ + K++ A V E+ K+ PP+ T+N F+ C +
Sbjct: 353 EMRKCGCMPDVSTYKDLIEGMLLVDKLDAAYCVLDEMAKAGFPPDIVTYNCFLKVLCGLQ 412
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
+ D+A + M C P V +Y+ ++ + + + EM +GC V TY
Sbjct: 413 KADDALELCERMIEAHCEPSVHTYNMLMVMFFEMREPDRAINIWIEMDKRGCHRAVDTYE 472
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLG 353
T++ L SG E+A + +++ G K + F+ ++ L
Sbjct: 473 TMIDGLFDSGRTEDATALLDEVINRGMKLSYKKFDAIMLRLS 514
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 95/220 (43%), Gaps = 18/220 (8%)
Query: 133 SSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTF 191
+++ Y +M+ L K QM++ L+ EM K G + ++T ++ + + A
Sbjct: 327 TAKTYSIMIAALAKAGQMEECFELISEMRKCGCMPDVSTYKDLIEGMLLVDKLDAAYCVL 386
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-----KSCIPPNAHTFNIFIHG 246
DE+ G + T N L LC K + A LEL ++ P+ HT+N+ +
Sbjct: 387 DEMAKAGFPPDIVTYNCFLKVLCGLQKADDA----LELCERMIEAHCEPSVHTYNMLMVM 442
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
+ ++ D A EM GCH V +Y T+I LLDE+ +G +
Sbjct: 443 FFEMREPDRAINIWIEMDKRGCHRAVDTYETMIDGLFDSGRTEDATALLDEVINRGMKLS 502
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFN 346
+ +M L+ G+ R++E M+ RF+N
Sbjct: 503 YKKFDAIMLRLSAVGNLGAIHRLSEHMR--------RFYN 534
>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 686
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 168/354 (47%), Gaps = 21/354 (5%)
Query: 153 MRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDT 212
++ +LE ++VT N + + F G++ +A +DE+ G+ NT T N ++D
Sbjct: 311 LQEMLERKISPNVVTYNAL---INAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDG 367
Query: 213 LCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHP 270
CK+ +++ A +F + K C P+ TF I G+C R+D+ + EM G
Sbjct: 368 FCKQDRLDAAEDMFYLMATKGC-SPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVA 426
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRIT 330
++Y+T+I +C + + +L +M + G P++VT T++ L +G ++A+ +
Sbjct: 427 NTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMF 486
Query: 331 EKMK-----------IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTS 379
+ M+ G +PD +N LI L + EA +Y+ EMP G+ PDT
Sbjct: 487 KAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYE-EMPHRGIVPDTI 545
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLD 439
T+++MI ++A + M + PNV TF+ L+ K G+ D+ L +
Sbjct: 546 TYSSMIDGLCKQSRLDEATQMFVSMGS-KSFSPNVVTFNTLINGYCKAGRVDDGLELFCE 604
Query: 440 DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
+ + + D Y +I+G + A +F+EMI + P T R +L
Sbjct: 605 --MGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNML 656
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 117/429 (27%), Positives = 189/429 (44%), Gaps = 19/429 (4%)
Query: 65 PDIDVIISKVHVGSSEDEVFQS--LKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGI 120
PD+ + ++ E V ++ L V N +QP + D SAL +
Sbjct: 180 PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNL 239
Query: 121 FRWAGSCPGYEHSSEIYEMMVDILGK-VRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFS 179
R + + IY ++D L K R D +E KG + T ++ F
Sbjct: 240 LRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFC 299
Query: 180 GAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAH 238
+G+W A R E+ + N T N L++ KEGK A ++ E L I PN
Sbjct: 300 ISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTI 359
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
T+N I G+CK +R+D A+ M GC P V +++T+I YC ELL EM
Sbjct: 360 TYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEM 419
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRV 358
+G N VTY T++ GD A+ ++++M G PD N L+ L ++
Sbjct: 420 PRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKL 479
Query: 359 QEAVYVYQVEM----------PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
++A+ +++ P NGV PD T+N +I + G +A + EEM
Sbjct: 480 KDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPH-R 538
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
P+ T+ ++ K + DE +Q+ M +K S ++ T+ +I+G C+A + +
Sbjct: 539 GIVPDTITYSSMIDGLCKQSRLDEA-TQMFVSMGSK-SFSPNVVTFNTLINGYCKAGRVD 596
Query: 469 WAYLLFKEM 477
LF EM
Sbjct: 597 DGLELFCEM 605
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 148/312 (47%), Gaps = 7/312 (2%)
Query: 205 TMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
T L++ LC+EG+V A ++ + ++ + P+ T+ F+ G CK+ A +++M
Sbjct: 184 TFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKM 243
Query: 264 KGHG-CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGD 322
+ P V+ YS II C+ S + L EMQ +G PN+VTY ++ SG
Sbjct: 244 EEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGR 303
Query: 323 FEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFN 382
+ A R+ ++M P+ +N LI + + EA +Y EM G+ P+T T+N
Sbjct: 304 WSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYD-EMLPRGIIPNTITYN 362
Query: 383 TMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMV 442
+MI F + A + M + C P+V TF L+ + D+ + +LL +M
Sbjct: 363 SMIDGFCKQDRLDAAEDMFYLMAT-KGCSPDVFTFTTLIDGYCGAKRIDDGM-ELLHEM- 419
Query: 443 NKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHM 501
+ L + TY +IHG C A L ++MI + P TC +LD + +
Sbjct: 420 PRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKL 479
Query: 502 YDAAEKIEAVMK 513
DA E +A+ K
Sbjct: 480 KDALEMFKAMQK 491
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 168/372 (45%), Gaps = 18/372 (4%)
Query: 155 ALLEEMSKGHI----VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLL 210
ALL+ M + + +T T M + + +R +E+ ++ N + ++
Sbjct: 203 ALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISH--IKPNVVIYSAII 260
Query: 211 DTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCH 269
D LCK+G+ + ++F+E++ I PN T+N I G+C R AQ +QEM
Sbjct: 261 DGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKIS 320
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI 329
P V++Y+ +I ++ ++ F + EL DEM +G PN +TY +++ K + A +
Sbjct: 321 PNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDM 380
Query: 330 TEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFS 389
M G PD F LI A R+ + + + EMP G+ +T T+NT+I F
Sbjct: 381 FYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLH-EMPRRGLVANTVTYNTLIHGFC 439
Query: 390 HHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL---------LDD 440
G A + ++M C P++ T + LL GK + L LD
Sbjct: 440 LVGDLNAALDLSQQMISSGVC-PDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDA 498
Query: 441 MVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKH 500
+ + D+ TY ++I GL K A L++EM I P T ++D + ++
Sbjct: 499 SHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQS 558
Query: 501 MYDAAEKIEAVM 512
D A ++ M
Sbjct: 559 RLDEATQMFVSM 570
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 154/313 (49%), Gaps = 16/313 (5%)
Query: 205 TMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
+ +L+ C K+ A S F +L K + P+ TF +HG C +RV EA ++
Sbjct: 118 SFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI 177
Query: 264 KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF 323
C P V++++T++ CR+ + LLD M G P+ +TY T + + K GD
Sbjct: 178 ----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDT 233
Query: 324 EEAIRITEKM-KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFN 382
A+ + KM +I KP+ ++ +I L + R ++ ++ +EM + G+ P+ T+N
Sbjct: 234 VSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLF-IEMQDKGIFPNIVTYN 292
Query: 383 TMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMV 442
MI F G A +L+EM + PNV T++ L+ + K GK E ++L D+M+
Sbjct: 293 CMIGGFCISGRWSAAQRLLQEMLE-RKISPNVVTYNALINAFVKEGKFFEA-AELYDEML 350
Query: 443 NKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMY 502
+ + + TY +I G C+ ++ + A +F M +P T ++D Y
Sbjct: 351 PRGIIP-NTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDG------Y 403
Query: 503 DAAEKIEAVMKKL 515
A++I+ M+ L
Sbjct: 404 CGAKRIDDGMELL 416
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 108/435 (24%), Positives = 179/435 (41%), Gaps = 63/435 (14%)
Query: 30 ENCSHI-----VSSSPIESYCSDGARLDHHQVLC--VDSPRLPDIDVIISKVHVG----S 78
E SHI + S+ I+ C DG D H + D P+I + +G S
Sbjct: 244 EEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNI--VTYNCMIGGFCIS 301
Query: 79 SEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCP-GYEHSSEIY 137
Q L Q+ + I P+ N LI+ F + K + P G ++ Y
Sbjct: 302 GRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITY 361
Query: 138 EMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGT 196
M+D K ++D + M+ KG + T ++ + GA + +D + E+
Sbjct: 362 NSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPR 421
Query: 197 FGLEKNTETMNLL-----------------------------------LDTLCKEGKVEL 221
GL NT T N L LD LC GK++
Sbjct: 422 RGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKD 481
Query: 222 ARSVF-------LELKSCIP-----PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCH 269
A +F ++L + P P+ T+NI I G + EA+ +EM G
Sbjct: 482 ALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIV 541
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI 329
P I+YS++I C+Q + ++ M ++ PNVVT+ T+++ K+G ++ + +
Sbjct: 542 PDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLEL 601
Query: 330 TEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFS 389
+M G D+ + LIY + + A+ ++Q EM +GV PDT T M+T F
Sbjct: 602 FCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQ-EMISSGVYPDTITIRNMLTGFW 660
Query: 390 HHGHHEKAFHVLEEM 404
E+A +LE++
Sbjct: 661 SKEELERAVAMLEDL 675
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 131/287 (45%), Gaps = 8/287 (2%)
Query: 229 LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
L+S P+ FN + ++ R D Q+M+ + S++ +I+ +C
Sbjct: 73 LRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKL 132
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
++ G P+VVT+TT++ L EA+ + ++ +PD F L
Sbjct: 133 PFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----CRPDVLTFTTL 188
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
+ L R RV EAV + M ENG+ PD T+ T + G A ++L +M ++
Sbjct: 189 MNGLCREGRVVEAVALLD-RMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEIS 247
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
H KPNV + ++ K G+ + L +M +K +I TY +I G C + +
Sbjct: 248 HIKPNVVIYSAIIDGLCKDGRHSDS-HNLFIEMQDKGIFP-NIVTYNCMIGGFCISGRWS 305
Query: 469 WAYLLFKEMIGHDITPRYQTCRLILDE-VKQKHMYDAAEKIEAVMKK 514
A L +EM+ I+P T +++ VK+ ++AAE + ++ +
Sbjct: 306 AAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPR 352
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 80/155 (51%), Gaps = 1/155 (0%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTF 240
G++ +A ++E+ G+ +T T + ++D LCK+ +++ A +F+ + S PN TF
Sbjct: 523 GKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTF 582
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
N I+G+CK RVD+ EM G I Y T+I + + N + ++ EM +
Sbjct: 583 NTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMIS 642
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKI 335
G P+ +T +++ + E A+ + E +++
Sbjct: 643 SGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQM 677
>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 918
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 200/411 (48%), Gaps = 7/411 (1%)
Query: 106 LIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGH 164
L H K D SAL +F G E ++ Y +++ L ++++ L+ EM G
Sbjct: 258 LGHCRKHDLDSALQVFNQMAK-EGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGI 316
Query: 165 IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARS 224
+ T +T + G +EDA R F ++ G E N T L+ LC G +++A
Sbjct: 317 LPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIG 376
Query: 225 VFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYC 283
+F + + + PN T+N I+ + R+ A + M +GC P +++Y+ +I+ YC
Sbjct: 377 LFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYC 436
Query: 284 RQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSR 343
+ K +++ M +G N+VTY T++ SG+ A+RI + M+ G KPD
Sbjct: 437 ILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEW 496
Query: 344 FFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEE 403
+ LI + S+++ A ++ EM ++G+ P+ T+ +I + + A +LE
Sbjct: 497 SYTELICGFCKISKMESAFGLFN-EMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEH 555
Query: 404 MNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCR 463
M K C+PNVQT++ L+ K + + ++ L ++ + + ++ TYT +I GLC+
Sbjct: 556 M-KRSGCRPNVQTYNVLIHGLTK--QNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCK 612
Query: 464 ANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
A +F +MI P T ++ + Q+ + AE + A +++
Sbjct: 613 NGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELER 663
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 171/387 (44%), Gaps = 53/387 (13%)
Query: 164 HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELAR 223
H+ L A VM R+ R E G++ N N +++ LCK+G V A
Sbjct: 189 HLSRLGMTAAVMDRYH---------RMLSE----GVQPNLLIYNAVINALCKDGNVADAE 235
Query: 224 SVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSY 282
++ ++ +S + P+ T+ I G C+ + +D A +M GC P ++YST+I
Sbjct: 236 TIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGL 295
Query: 283 CRQYNFSKVYELLDEM-----------------------------------QAQGCPPNV 307
C ++ ++L+ EM + +GC PNV
Sbjct: 296 CDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNV 355
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
TYT ++S L SG + AI + +M G P++ +N LI L R++ A V +
Sbjct: 356 YTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNL 415
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKT 427
M NG +P+ T+N MI + G +KA V+ M + H N+ T++ ++K +
Sbjct: 416 -MGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGH-SANLVTYNTIIKGYCDS 473
Query: 428 GKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
G T L L D++ D +YT +I G C+ +K E A+ LF EM+ + P
Sbjct: 474 GNTTSALRIL--DLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEV 531
Query: 488 TCRLILDEVKQKHMYDAAEKIEAVMKK 514
T ++D + D A + MK+
Sbjct: 532 TYTALIDGYCKDEKLDTATSLLEHMKR 558
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 166/353 (47%), Gaps = 12/353 (3%)
Query: 73 KVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWK-SALGIFRWAGSCPGYE 131
KV +G +F + +D V + L+N L+ + + L + G P
Sbjct: 372 KVAIG-----LFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIV 426
Query: 132 HSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTF 191
+E+ + + + M M +L+ ++VT NTI K + +G A+R
Sbjct: 427 TYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIK---GYCDSGNTTSALRIL 483
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKI 250
D + G + + + L+ CK K+E A +F E+ + PN T+ I G+CK
Sbjct: 484 DLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKD 543
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
++D A ++ MK GC P V +Y+ +I +Q NFS EL M +G PNVVTY
Sbjct: 544 EKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTY 603
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
T ++ L K+G A+ + KM G P+ ++ LI LG+ +V+EA ++ E+
Sbjct: 604 TAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLF-AELE 662
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
+G+ PD T+ MI + G E AF+ L M K C+P + T+ L+K
Sbjct: 663 RHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIK-AGCQPTLWTYGVLIKG 714
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 102/432 (23%), Positives = 181/432 (41%), Gaps = 52/432 (12%)
Query: 87 LKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWA---GSCPGYEHSSEIYEMMV 141
L +D C +P + +LI F +SA G+F G CP + Y ++
Sbjct: 485 LMRDGGC---KPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCP----NEVTYTALI 537
Query: 142 DILGKVRQMDQMRALLEEMSKG----HIVTLNTIAKVMRR---FSGAGQWEDAVRTFDEL 194
D K ++D +LLE M + ++ T N + + + FSGA E+ + E
Sbjct: 538 DGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGA---EELCKVMIEE 594
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINR 252
G F N T ++D LCK G LA +F ++ + C+P N T++ I + +
Sbjct: 595 GIF---PNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLP-NLLTYSSLIRALGQEGK 650
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
V+EA+ E++ HG P I+Y +I++Y + L M GC P + TY
Sbjct: 651 VEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGV 710
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN 372
++ L E + +++ + PD NC + G + Q+AV V ++ E
Sbjct: 711 LIKGLKN-----EYLLADQRLAAL---PDV-VPNC---SFGYQTTDQDAVSVMSAKLAEL 758
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
N +++ S G +A +L M C P+ + ++ LL S + D
Sbjct: 759 DPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLC-PDQEAYNSLLCSLLRVRNVD- 816
Query: 433 CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLI 492
L+ + ++ + + Y +I LC+ ++ + A + F+ M+ P
Sbjct: 817 -LAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNP-------- 867
Query: 493 LDEVKQKHMYDA 504
D+V Q + D
Sbjct: 868 -DDVVQAVLIDG 878
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 99/223 (44%), Gaps = 6/223 (2%)
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
G + +YS ++ R + V + M ++G PN++ Y V++ L K G+ +A
Sbjct: 175 GLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADA 234
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
I +K+ PD+ + +I R + A+ V+ +M + G P+T T++T+I
Sbjct: 235 ETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFN-QMAKEGCEPNTVTYSTLIN 293
Query: 387 MFSHHGHHEKAFHVLEEMNKLEHCKPNVQT-FHPLLKSCFKTGKTDECLSQLLDDMVNKH 445
G +AF ++ EM L P T P++ C D +L DM NK
Sbjct: 294 GLCDSGRVNEAFDLIREM-ILHGILPTAHTCTGPIIALCDMGCYEDAW--RLFVDMKNK- 349
Query: 446 HLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
++ TYT +I GLC + + A LF M + P T
Sbjct: 350 GCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVT 392
>gi|255660906|gb|ACU25622.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 484
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 195/389 (50%), Gaps = 14/389 (3%)
Query: 100 HYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEE 159
H LV ++H K + AL FRW +EH+ E + +++ILG+ +++ R +L +
Sbjct: 12 HELVYNVLHSAKTS-EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLD 70
Query: 160 M-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
+ KG + ++ + G +++V+ F ++ G+E+ ++ N L + + G+
Sbjct: 71 IPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGR 130
Query: 219 VELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
+A+ F + L I P HTFN+ I G+ +V+ A ++MK P V++Y+T
Sbjct: 131 YMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNT 190
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
II Y R + + EM+ + P VVTYTT++ ++A+R+ E+MK G
Sbjct: 191 IINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFG 250
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP-DTSTFNTMITMFSHHGHHEK 396
KP++ ++ L+ L A ++ EA + + EM + +AP D S F +I+ + G+ +
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMTEARSILK-EMMDKYLAPTDNSIFMRLISSQCNSGNLDA 309
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK-------HHLSL 449
A VL+ M +L + L+++ K G+ D+ + +LLD ++ K L L
Sbjct: 310 AADVLKAMIRLS-VPTEAGHYGVLIENFCKAGQYDQAV-KLLDKLIEKDIILRPQSTLHL 367
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMI 478
+ + Y +I LC + A L ++++
Sbjct: 368 EPSAYNPMIEYLCNNGQAAKAEALVRQLL 396
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 114/238 (47%), Gaps = 6/238 (2%)
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+I SY ++ + ++ +M+ G + +Y + + + G + A R KM G
Sbjct: 86 MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEG 145
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKA 397
+P FN +I+ + +V+ A ++ +M ++PD T+NT+I + E+A
Sbjct: 146 IEPTRHTFNVMIWGFFLSGKVETANRFFE-DMKSREISPDVVTYNTIINGYYRVKKMEEA 204
Query: 398 FHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLV 457
EM K + +P V T+ L+K + D+ L +L+++M + + TY+ +
Sbjct: 205 EKYFVEM-KGRNIEPTVVTYTTLIKGYVSVDQVDDAL-RLVEEM-KGFGIKPNAITYSTL 261
Query: 458 IHGLCRANKCEWAYLLFKEMIGHDITPRYQTC--RLILDEVKQKHMYDAAEKIEAVMK 513
+ GLC A K A + KEM+ + P + RLI + ++ AA+ ++A+++
Sbjct: 262 LPGLCNAEKMTEARSILKEMMDKYLAPTDNSIFMRLISSQCNSGNLDAAADVLKAMIR 319
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 5/205 (2%)
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N T+ ++ L ++ A I + G + D + +I + G+ VQE+V ++
Sbjct: 44 NRETHLKIIEILGRASKLNHARCILLDIPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMF 103
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
Q +M E GV ++N + + G + A +M E +P TF+ ++ F
Sbjct: 104 Q-KMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLS-EGIEPTRHTFNVMIWGFF 161
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
+GK E ++ +DM ++ +S D+ TY +I+G R K E A F EM G +I P
Sbjct: 162 LSGKV-ETANRFFEDMKSRE-ISPDVVTYNTIINGYYRVKKMEEAEKYFVEMKGRNIEPT 219
Query: 486 YQT-CRLILDEVKQKHMYDAAEKIE 509
T LI V + DA +E
Sbjct: 220 VVTYTTLIKGYVSVDQVDDALRLVE 244
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 79/213 (37%), Gaps = 28/213 (13%)
Query: 131 EHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFS----------- 179
E S + EMM L MR + + + G++ + K M R S
Sbjct: 273 EARSILKEMMDKYLAPTDNSIFMRLISSQCNSGNLDAAADVLKAMIRLSVPTEAGHYGVL 332
Query: 180 -----GAGQWEDAVRTFDEL----------GTFGLEKNTETMNLLLDTLCKEGKVELARS 224
AGQ++ AV+ D+L T LE + N +++ LC G+ A +
Sbjct: 333 IENFCKAGQYDQAVKLLDKLIEKDIILRPQSTLHLEPSA--YNPMIEYLCNNGQAAKAEA 390
Query: 225 VFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCR 284
+ +L + N I G + D A ++ M +Y +++QSY +
Sbjct: 391 LVRQLLKLGVQDPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYDSLVQSYLK 450
Query: 285 QYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
+ + LD M P+ + +VM L
Sbjct: 451 KNEPADAKAALDSMIENDHLPDSSLFRSVMESL 483
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 180/383 (46%), Gaps = 41/383 (10%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
GYE + I+ +++ L ++ + L++ M + GH TL T+ ++ G+ DA
Sbjct: 153 GYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDA 212
Query: 188 VRTFDELGTFGLEKNTET-----------------MNLL------------------LDT 212
V D + G + N T M LL +D
Sbjct: 213 VVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 272
Query: 213 LCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPC 271
LCK+G ++ A ++F E++ + T+N I G+C R D+ +++M P
Sbjct: 273 LCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPN 332
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
V+++S +I S+ ++ + +LL EM +G PN +TY +++ K EEAI++ +
Sbjct: 333 VVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVD 392
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHH 391
M G PD FN LI +A+R+ + + +++ EM GV +T T+NT++ F
Sbjct: 393 LMISKGCDPDIMTFNILINGYCKANRIDDGLELFR-EMSLRGVIANTVTYNTLVQGFCQS 451
Query: 392 GHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDI 451
G E A + +EM +P++ ++ LL G+ ++ L + K + LDI
Sbjct: 452 GKLEVAKKLFQEMVS-RRVRPDIVSYKILLDGLCDNGELEKALEIF--GKIEKSKMELDI 508
Query: 452 TTYTLVIHGLCRANKCEWAYLLF 474
Y ++IHG+C A+K + A+ LF
Sbjct: 509 GIYMIIIHGMCNASKVDDAWDLF 531
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 161/335 (48%), Gaps = 6/335 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDA 187
G++ Y ++ + D LL +M K I + T + ++ F G+ +A
Sbjct: 293 GFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREA 352
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELA-RSVFLELKSCIPPNAHTFNIFIHG 246
+ E+ G+ NT T N L+D CKE ++E A + V L + P+ TFNI I+G
Sbjct: 353 DQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILING 412
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
+CK NR+D+ +EM G ++Y+T++Q +C+ +L EM ++ P+
Sbjct: 413 YCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPD 472
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
+V+Y ++ L +G+ E+A+ I K++ + D + +I+ + AS+V +A ++
Sbjct: 473 IVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLF- 531
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
+P GV D +N MI+ KA + +M + H P+ T++ L+++
Sbjct: 532 CSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHA-PDELTYNILIRA--H 588
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGL 461
G D + L + + D++T +VI+ L
Sbjct: 589 LGDDDATTAAELIEEMKSSGFPADVSTVKMVINML 623
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 133/299 (44%), Gaps = 6/299 (2%)
Query: 218 KVELARSVFLELKSCIP-PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYS 276
K + A +F ++ P P FN K + + ++M+ G + + S
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 277 TIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIV 336
+I +CR S + + ++ G P+ V + T+++ L EA+ + ++M +
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 337 GSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEK 396
G KP N L+ L +V +AV + M E G P+ T+ ++ + G
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLID-RMVETGFQPNEVTYGPVLNVMCKSGQTAL 246
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTL 456
A +L +M + + K + + ++ K G D + L ++M K + DI TY
Sbjct: 247 AMELLRKMEE-RNIKLDAVKYSIIIDGLCKDGSLDNAFN-LFNEMEIKGFKA-DIITYNT 303
Query: 457 VIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE-VKQKHMYDAAEKIEAVMKK 514
+I G C A + + L ++MI I+P T +++D VK+ + +A + ++ +M++
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQR 362
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 148/337 (43%), Gaps = 49/337 (14%)
Query: 35 IVSSSPIESYCS-----DGARLDHHQVLCVDSPRLPDIDVIISKVHVGSSEDEVFQSLKQ 89
I ++ I +C+ DGA+L + SP + V+I E Q LK+
Sbjct: 299 ITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKE 358
Query: 90 DHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKV 147
+ I P+ N LI F ++ + A+ + S G + + ++++ K
Sbjct: 359 -MMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMIS-KGCDPDIMTFNILINGYCKA 416
Query: 148 RQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETM 206
++D L EMS +G I T +++ F +G+ E A + F E+ + + + +
Sbjct: 417 NRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSY 476
Query: 207 NLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTI----- 260
+LLD LC G++E A +F ++ KS + + + I IHG C ++VD+A W +
Sbjct: 477 KILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDA-WDLFCSLP 535
Query: 261 -------------------------------QEMKGHGCHPCVISYSTIIQSYCRQYNFS 289
++M G P ++Y+ +I+++ + +
Sbjct: 536 LKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDAT 595
Query: 290 KVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
EL++EM++ G P +V T V++ L+ SG+ +++
Sbjct: 596 TAAELIEEMKSSGFPADVSTVKMVINMLS-SGELDKS 631
>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 168/354 (47%), Gaps = 21/354 (5%)
Query: 153 MRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDT 212
++ +LE ++VT N + + F G++ +A +DE+ G+ NT T N ++D
Sbjct: 311 LQEMLERKISPNVVTYNAL---INAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDG 367
Query: 213 LCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHP 270
CK+ +++ A +F + K C P+ TF I G+C R+D+ + EM G
Sbjct: 368 FCKQDRLDAAEDMFYLMATKGC-SPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVA 426
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRIT 330
++Y+T+I +C + + +L +M + G P++VT T++ L +G ++A+ +
Sbjct: 427 NTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMF 486
Query: 331 EKMK-----------IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTS 379
+ M+ G +PD +N LI L + EA +Y+ EMP G+ PDT
Sbjct: 487 KAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYE-EMPHRGIVPDTI 545
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLD 439
T+++MI ++A + M + PNV TF+ L+ K G+ D+ L +
Sbjct: 546 TYSSMIDGLCKQSRLDEATQMFVSMGS-KSFSPNVVTFNTLINGYCKAGRVDDGLELFCE 604
Query: 440 DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
+ + + D Y +I+G + A +F+EMI + P T R +L
Sbjct: 605 --MGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNML 656
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 117/429 (27%), Positives = 189/429 (44%), Gaps = 19/429 (4%)
Query: 65 PDIDVIISKVHVGSSEDEVFQS--LKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGI 120
PD+ + ++ E V ++ L V N +QP + D SAL +
Sbjct: 180 PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNL 239
Query: 121 FRWAGSCPGYEHSSEIYEMMVDILGK-VRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFS 179
R + + IY ++D L K R D +E KG + T ++ F
Sbjct: 240 LRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFC 299
Query: 180 GAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAH 238
+G+W A R E+ + N T N L++ KEGK A ++ E L I PN
Sbjct: 300 ISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTI 359
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
T+N I G+CK +R+D A+ M GC P V +++T+I YC ELL EM
Sbjct: 360 TYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEM 419
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRV 358
+G N VTY T++ GD A+ ++++M G PD N L+ L ++
Sbjct: 420 PRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKL 479
Query: 359 QEAVYVYQVEM----------PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
++A+ +++ P NGV PD T+N +I + G +A + EEM
Sbjct: 480 KDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPH-R 538
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
P+ T+ ++ K + DE +Q+ M +K S ++ T+ +I+G C+A + +
Sbjct: 539 GIVPDTITYSSMIDGLCKQSRLDEA-TQMFVSMGSK-SFSPNVVTFNTLINGYCKAGRVD 596
Query: 469 WAYLLFKEM 477
LF EM
Sbjct: 597 DGLELFCEM 605
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 148/312 (47%), Gaps = 7/312 (2%)
Query: 205 TMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
T L++ LC+EG+V A ++ + ++ + P+ T+ F+ G CK+ A +++M
Sbjct: 184 TFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKM 243
Query: 264 KGHG-CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGD 322
+ P V+ YS II C+ S + L EMQ +G PN+VTY ++ SG
Sbjct: 244 EEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGR 303
Query: 323 FEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFN 382
+ A R+ ++M P+ +N LI + + EA +Y EM G+ P+T T+N
Sbjct: 304 WSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYD-EMLPRGIIPNTITYN 362
Query: 383 TMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMV 442
+MI F + A + M + C P+V TF L+ + D+ + +LL +M
Sbjct: 363 SMIDGFCKQDRLDAAEDMFYLMAT-KGCSPDVFTFTTLIDGYCGAKRIDDGM-ELLHEM- 419
Query: 443 NKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHM 501
+ L + TY +IHG C A L ++MI + P TC +LD + +
Sbjct: 420 PRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKL 479
Query: 502 YDAAEKIEAVMK 513
DA E +A+ K
Sbjct: 480 KDALEMFKAMQK 491
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 168/372 (45%), Gaps = 18/372 (4%)
Query: 155 ALLEEMSKGHI----VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLL 210
ALL+ M + + +T T M + + +R +E+ ++ N + ++
Sbjct: 203 ALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISH--IKPNVVIYSAII 260
Query: 211 DTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCH 269
D LCK+G+ + ++F+E++ I PN T+N I G+C R AQ +QEM
Sbjct: 261 DGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKIS 320
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI 329
P V++Y+ +I ++ ++ F + EL DEM +G PN +TY +++ K + A +
Sbjct: 321 PNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDM 380
Query: 330 TEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFS 389
M G PD F LI A R+ + + + EMP G+ +T T+NT+I F
Sbjct: 381 FYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLH-EMPRRGLVANTVTYNTLIHGFC 439
Query: 390 HHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL---------LDD 440
G A + ++M C P++ T + LL GK + L LD
Sbjct: 440 LVGDLNAALDLSQQMISSGVC-PDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDA 498
Query: 441 MVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKH 500
+ + D+ TY ++I GL K A L++EM I P T ++D + ++
Sbjct: 499 SHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQS 558
Query: 501 MYDAAEKIEAVM 512
D A ++ M
Sbjct: 559 RLDEATQMFVSM 570
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 154/313 (49%), Gaps = 16/313 (5%)
Query: 205 TMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
+ +L+ C K+ A S F +L K + P+ TF +HG C +RV EA ++
Sbjct: 118 SFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI 177
Query: 264 KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF 323
C P V++++T++ CR+ + LLD M G P+ +TY T + + K GD
Sbjct: 178 ----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDT 233
Query: 324 EEAIRITEKM-KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFN 382
A+ + KM +I KP+ ++ +I L + R ++ ++ +EM + G+ P+ T+N
Sbjct: 234 VSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLF-IEMQDKGIFPNIVTYN 292
Query: 383 TMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMV 442
MI F G A +L+EM + PNV T++ L+ + K GK E ++L D+M+
Sbjct: 293 CMIGGFCISGRWSAAQRLLQEMLE-RKISPNVVTYNALINAFVKEGKFFEA-AELYDEML 350
Query: 443 NKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMY 502
+ + + TY +I G C+ ++ + A +F M +P T ++D Y
Sbjct: 351 PRGIIP-NTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDG------Y 403
Query: 503 DAAEKIEAVMKKL 515
A++I+ M+ L
Sbjct: 404 CGAKRIDDGMELL 416
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 108/439 (24%), Positives = 181/439 (41%), Gaps = 63/439 (14%)
Query: 30 ENCSHI-----VSSSPIESYCSDGARLDHHQVLC--VDSPRLPDIDVIISKVHVG----S 78
E SHI + S+ I+ C DG D H + D P+I + +G S
Sbjct: 244 EEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNI--VTYNCMIGGFCIS 301
Query: 79 SEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCP-GYEHSSEIY 137
Q L Q+ + I P+ N LI+ F + K + P G ++ Y
Sbjct: 302 GRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITY 361
Query: 138 EMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGT 196
M+D K ++D + M+ KG + T ++ + GA + +D + E+
Sbjct: 362 NSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPR 421
Query: 197 FGLEKNTETMNLL-----------------------------------LDTLCKEGKVEL 221
GL NT T N L LD LC GK++
Sbjct: 422 RGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKD 481
Query: 222 ARSVF-------LELKSCIP-----PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCH 269
A +F ++L + P P+ T+NI I G + EA+ +EM G
Sbjct: 482 ALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIV 541
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI 329
P I+YS++I C+Q + ++ M ++ PNVVT+ T+++ K+G ++ + +
Sbjct: 542 PDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLEL 601
Query: 330 TEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFS 389
+M G D+ + LIY + + A+ ++Q EM +GV PDT T M+T F
Sbjct: 602 FCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQ-EMISSGVYPDTITIRNMLTGFW 660
Query: 390 HHGHHEKAFHVLEEMNKLE 408
E+A +LE++ + +
Sbjct: 661 SKEELERAVAMLEDLQRYQ 679
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 131/287 (45%), Gaps = 8/287 (2%)
Query: 229 LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
L+S P+ FN + ++ R D Q+M+ + S++ +I+ +C
Sbjct: 73 LRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKL 132
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
++ G P+VVT+TT++ L EA+ + ++ +PD F L
Sbjct: 133 PFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----CRPDVLTFTTL 188
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
+ L R RV EAV + M ENG+ PD T+ T + G A ++L +M ++
Sbjct: 189 MNGLCREGRVVEAVALLD-RMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEIS 247
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
H KPNV + ++ K G+ + L +M +K +I TY +I G C + +
Sbjct: 248 HIKPNVVIYSAIIDGLCKDGRHSDS-HNLFIEMQDKGIFP-NIVTYNCMIGGFCISGRWS 305
Query: 469 WAYLLFKEMIGHDITPRYQTCRLILDE-VKQKHMYDAAEKIEAVMKK 514
A L +EM+ I+P T +++ VK+ ++AAE + ++ +
Sbjct: 306 AAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPR 352
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/330 (30%), Positives = 173/330 (52%), Gaps = 17/330 (5%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKG---HIVTLNT-IAKVMRRFSGAGQWEDAVRTFD 192
Y +V+ L K ++D+ R L+ + KG +++T +T I+ + R G +A++ F
Sbjct: 118 YNSLVNGLCKNGRVDEARMLI--VDKGFSPNVITYSTLISGLCRELRGV---SEALKLFG 172
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKIN 251
+ G E T N+L+D L KE +V A +F L K + P+A T+ +FI G CK
Sbjct: 173 SVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAG 232
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
RV++A +++M GC P V+S++ +I C++ + LL M+A+GC PN +++
Sbjct: 233 RVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFN 292
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA---SRVQEAVYVYQVE 368
T++ ++G +++A+ ++M G KP +N L+ L +A R++EA+ ++
Sbjct: 293 TLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDA- 351
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M E G PD T++ +I G + A +L M + + C PNV T++ L+
Sbjct: 352 MIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAM-EAKGCIPNVYTYNSLISGLCGLE 410
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
K DE L +L MV K + D TY +I
Sbjct: 411 KVDEAL-ELFVAMVEKGCVP-DTITYGTII 438
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 185/394 (46%), Gaps = 19/394 (4%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKG----HIVTLNTIAKVMRRFSGAGQW 184
G+ + Y ++ L +M +AL E M K +VT NT+ + F G+
Sbjct: 5 GFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTL---LHGFCKVGEL 61
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIF 243
++A++ FD G + T N L++ CK K++ A+ + + S + P+ T+N
Sbjct: 62 DEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSL 121
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQY-NFSKVYELLDEMQAQG 302
++G CK RVDEA+ I + G P VI+YST+I CR+ S+ +L + QG
Sbjct: 122 VNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQG 178
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
P V TY ++ L K EA + + G +PD+ + I L +A RV++A+
Sbjct: 179 YEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDAL 238
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLK 422
+ + +M E G PD + N +I ++A +L M + + C PN +F+ L+
Sbjct: 239 LMLK-DMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGM-EAKGCSPNAISFNTLIC 296
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRA---NKCEWAYLLFKEMIG 479
+ GK + ++ + + K + + TY +++ GLC+A + + A LF MI
Sbjct: 297 GQCRAGKWKKAMTTFKEML--KRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIE 354
Query: 480 HDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
P T ++D + + D A ++ M+
Sbjct: 355 KGRVPDVVTYSALIDGLGKAGKLDDARRLLGAME 388
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 168/365 (46%), Gaps = 11/365 (3%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLE-EMSKGHIVTLNTIAKVMRRFSGAGQWEDA 187
GY Y ++ KV ++D+ + + + +G + + T ++ F A + ++A
Sbjct: 40 GYSPDVVTYNTLLHGFCKVGELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEA 99
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGW 247
R + + L + T N L++ LCK G+V+ AR + ++ PN T++ I G
Sbjct: 100 QRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEARMLIVD--KGFSPNVITYSTLISGL 157
Query: 248 CK-INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C+ + V EA + G P V +Y+ +I ++ ++ +EL + G P+
Sbjct: 158 CRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPD 217
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
+TYT + L K+G E+A+ + + M G PD N +I L + RV EA V
Sbjct: 218 AITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEA-EVLL 276
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
M G +P+ +FNT+I G +KA +EM K KP V T++ L+ K
Sbjct: 277 SGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLK-RGVKPTVVTYNILVDGLCK 335
Query: 427 T---GKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
G+ E ++ L D M+ K + D+ TY+ +I GL +A K + A L M
Sbjct: 336 ARQEGRIKEAIT-LFDAMIEKGRVP-DVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCI 393
Query: 484 PRYQT 488
P T
Sbjct: 394 PNVYT 398
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 109/410 (26%), Positives = 185/410 (45%), Gaps = 20/410 (4%)
Query: 85 QSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVD 142
Q+L + + P N L+H F + AL IF A G+ Y +++
Sbjct: 30 QALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGAVK-RGFVPDVVTYNALIN 88
Query: 143 ILGKVRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDA-VRTFDELGTFGLE 200
K ++D+ + +L+ M ++V + T ++ G+ ++A + D+ G
Sbjct: 89 GFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEARMLIVDK----GFS 144
Query: 201 KNTETMNLLLDTLCKE--GKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQW 258
N T + L+ LC+E G E + LK P T+NI I G K +RV+EA
Sbjct: 145 PNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFE 204
Query: 259 TIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLA 318
+ HG P I+Y+ I C+ +L +M +GC P+VV++ V++ L
Sbjct: 205 LFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLC 264
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDT 378
K +EA + M+ G P++ FN LI RA + ++A+ ++ EM + GV P
Sbjct: 265 KEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFK-EMLKRGVKPTV 323
Query: 379 STFNTMITMF---SHHGHHEKAFHVLEEMNKLEHCK-PNVQTFHPLLKSCFKTGKTDECL 434
T+N ++ G ++A + + M +E + P+V T+ L+ K GK D+
Sbjct: 324 VTYNILVDGLCKARQEGRIKEAITLFDAM--IEKGRVPDVVTYSALIDGLGKAGKLDDA- 380
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
+LL M K + ++ TY +I GLC K + A LF M+ P
Sbjct: 381 RRLLGAMEAKGCIP-NVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVP 429
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 133/264 (50%), Gaps = 8/264 (3%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
GYE Y +++D L K ++++ L + K G T + AG+ EDA
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDA 237
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIH 245
+ ++ G + + N +++ LCKE +V+ A + +E K C PNA +FN I
Sbjct: 238 LLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGC-SPNAISFNTLIC 296
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE---LLDEMQAQG 302
G C+ + +A T +EM G P V++Y+ ++ C+ ++ E L D M +G
Sbjct: 297 GQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKG 356
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
P+VVTY+ ++ L K+G ++A R+ M+ G P+ +N LI L +V EA+
Sbjct: 357 RVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEAL 416
Query: 363 YVYQVEMPENGVAPDTSTFNTMIT 386
++ V M E G PDT T+ T+I+
Sbjct: 417 ELF-VAMVEKGCVPDTITYGTIIS 439
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 70/136 (51%), Gaps = 3/136 (2%)
Query: 148 RQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN 207
+ M + +L+ K +VT N + + + G+ ++A+ FD + G + T +
Sbjct: 306 KAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYS 365
Query: 208 LLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKG 265
L+D L K GK++ AR + +E K CIP N +T+N I G C + +VDEA M
Sbjct: 366 ALIDGLGKAGKLDDARRLLGAMEAKGCIP-NVYTYNSLISGLCGLEKVDEALELFVAMVE 424
Query: 266 HGCHPCVISYSTIIQS 281
GC P I+Y TII +
Sbjct: 425 KGCVPDTITYGTIISA 440
>gi|255660902|gb|ACU25620.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
Length = 484
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 196/389 (50%), Gaps = 14/389 (3%)
Query: 100 HYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEE 159
H LV ++H K + AL FRW +EH+ E + +++ILG+ +++ R +L +
Sbjct: 12 HELVYNVLHSAKTS-EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLD 70
Query: 160 M-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
M KG + ++ + G +++V+ F ++ G+E+ ++ N L + + G+
Sbjct: 71 MPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFXVILRRGR 130
Query: 219 VELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
+A+ F ++ S I P HTFN+ I G+ +V+ A ++MK P V++Y+T
Sbjct: 131 YMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNT 190
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+I Y R + + EM+ + P VVTYTT++ ++A+R+ E+MK G
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFG 250
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP-DTSTFNTMITMFSHHGHHEK 396
KP++ ++ L+ L A ++ EA + + EM + +AP D S F +I+ + G+ +
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMTEARSILK-EMMDKYLAPTDNSIFMRLISSQCNSGNLDA 309
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK-------HHLSL 449
A VL+ M +L + L+++ K G+ D+ + +LLD ++ K L L
Sbjct: 310 AADVLKAMIRLS-VPTEAGHYGVLIENFCKAGQYDQAV-KLLDKLIEKDIILRPQSTLHL 367
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMI 478
+ + Y +I LC + A L ++++
Sbjct: 368 EPSAYNPMIEYLCNNGQAAKAEALVRQLL 396
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 126/267 (47%), Gaps = 6/267 (2%)
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
+ ++++ A+ + +M G + +I SY ++ + ++ +M+ G +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIK 116
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
+Y + + + G + A R KM G +P FN +I+ + +V+ A ++ +
Sbjct: 117 SYNALFXVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFE-D 175
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M ++PD T+NTMI + E+A EM K + +P V T+ L+K
Sbjct: 176 MKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEM-KGRNIEPTVVTYTTLIKGYVSVD 234
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ D+ L +L+++M + + TY+ ++ GLC A K A + KEM+ + P +
Sbjct: 235 QVDDAL-RLVEEM-KGFGIKPNAITYSTLLPGLCNAEKMTEARSILKEMMDKYLAPTDNS 292
Query: 489 C--RLILDEVKQKHMYDAAEKIEAVMK 513
RLI + ++ AA+ ++A+++
Sbjct: 293 IFMRLISSQCNSGNLDAAADVLKAMIR 319
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 5/205 (2%)
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N T+ ++ L ++ A I M G + D + +I + G+ VQE+V ++
Sbjct: 44 NRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMF 103
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
Q +M E GV ++N + + G + A +M E +P TF+ ++ F
Sbjct: 104 Q-KMEELGVERTIKSYNALFXVILRRGRYMMAKRYFNKMLS-EGIEPTRHTFNVMIWGFF 161
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
+GK E ++ +DM ++ +S D+ TY +I+G R K E A F EM G +I P
Sbjct: 162 LSGKV-ETANRFFEDMKSRE-ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPT 219
Query: 486 YQT-CRLILDEVKQKHMYDAAEKIE 509
T LI V + DA +E
Sbjct: 220 VVTYTTLIKGYVSVDQVDDALRLVE 244
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 80/213 (37%), Gaps = 28/213 (13%)
Query: 131 EHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFS----------- 179
E S + EMM L MR + + + G++ + K M R S
Sbjct: 273 EARSILKEMMDKYLAPTDNSIFMRLISSQCNSGNLDAAADVLKAMIRLSVPTEAGHYGVL 332
Query: 180 -----GAGQWEDAVRTFDEL----------GTFGLEKNTETMNLLLDTLCKEGKVELARS 224
AGQ++ AV+ D+L T LE + N +++ LC G+ A +
Sbjct: 333 IENFCKAGQYDQAVKLLDKLIEKDIILRPQSTLHLEPSA--YNPMIEYLCNNGQAAKAEA 390
Query: 225 VFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCR 284
+ +L + N I G + D A ++ M +Y++++QSY +
Sbjct: 391 LVRQLLKLGVQDPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLK 450
Query: 285 QYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
+ + LD M P+ + +VM L
Sbjct: 451 KNEPADAKAALDSMIENDHLPDSSLFRSVMESL 483
>gi|414887392|tpg|DAA63406.1| TPA: hypothetical protein ZEAMMB73_124662 [Zea mays]
Length = 795
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 195/415 (46%), Gaps = 30/415 (7%)
Query: 116 SALGIFRWAG----------SCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI 165
+A+ +F AG + P + S+ Y +V + + A+ + M G +
Sbjct: 158 TAIRVFARAGCLAEASAILEAAPAPDASA--YTALVSAFSRAGRFRDAVAVFQRMVDGGV 215
Query: 166 ----VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVEL 221
VT N + + S W++ V D + G+E++ T N L+ + G
Sbjct: 216 QPALVTYNVVFHAYSKMSVP--WKEVVALVDSMKEDGIERDRYTYNTLISCCRRRGLHRE 273
Query: 222 ARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQ 280
A VF E+K+ P+ TFN + + K + +EA ++ M+ GC P V++Y+++I
Sbjct: 274 AAQVFDEMKAAGFEPDKVTFNSLLDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLIS 333
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
+Y + + EL EM+ +G P+VVTYTT++S L + G + A+ +M G P
Sbjct: 334 AYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRVGKIDAALATYSEMVRNGCSP 393
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
+ +N LI G + E + V+ ++ G PD T+NT++++F +G + V
Sbjct: 394 NLCTYNALIKLHGVRGKFTEMMAVFD-DLRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGV 452
Query: 401 LEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHG 460
+EM K + P T+ L+ S + G D+ + ++ M+ + + DI+TY V+
Sbjct: 453 FKEMKKAGYI-PERDTYVSLISSYSRCGLFDQAM-EIYKRMI-EAGIYPDISTYNAVLSA 509
Query: 461 LCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
L R + E A LF EM+ D P + +L H Y A+K++ MK L
Sbjct: 510 LARGGRWEQAEKLFAEMVDRDCKPDELSYSSLL------HAYANAKKLDK-MKTL 557
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 165/385 (42%), Gaps = 42/385 (10%)
Query: 92 VCNAIQPSHYLVNKLI--HRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQ 149
V N P+ N LI H + + + +F S GY + ++ + G+
Sbjct: 387 VRNGCSPNLCTYNALIKLHGVRGKFTEMMAVFDDLRSA-GYVPDVVTWNTLLSVFGQNGL 445
Query: 150 MDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNL 208
++ + +EM K G+I +T ++ +S G ++ A+ + + G+ + T N
Sbjct: 446 DSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNA 505
Query: 209 LLDTLCKEGKVELARSVFLEL--KSCIP------------PNAHTFN------------- 241
+L L + G+ E A +F E+ + C P NA +
Sbjct: 506 VLSALARGGRWEQAEKLFAEMVDRDCKPDELSYSSLLHAYANAKKLDKMKTLSEDIYAER 565
Query: 242 IFIHGWC---------KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
I H W K+N + E + QE++ C + + ++ Y + KV
Sbjct: 566 IERHNWLVKTLVLVNNKVNNLPETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVE 625
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
E+L M + TY ++M ++ GD E+ I ++K G +PD +N +IY
Sbjct: 626 EVLSLMMENSINHSAATYNSLMHMYSRLGDCEKCESILTEIKSSGMRPDRYSYNTVIYAY 685
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
GR +++EA ++ EM +GV PD T+N I + + E+A ++ + + C+P
Sbjct: 686 GRKGQMKEASRLFS-EMKCSGVKPDIVTYNIFIKSYVANIMFEEAIDLVRYL-VTQGCRP 743
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQL 437
N +TF+ +L+ + G+ E S L
Sbjct: 744 NERTFNSILQGYSRHGRMVEAKSFL 768
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 110/501 (21%), Positives = 203/501 (40%), Gaps = 91/501 (18%)
Query: 83 VFQSLKQDHVCNAIQPSHYLVNKLIH--RFKDDWKSALGIFRWAGSCPGYEHSSEIYEMM 140
+ S+K+D I+ Y N LI R + + A +F + G+E + +
Sbjct: 242 LVDSMKED----GIERDRYTYNTLISCCRRRGLHREAAQVFDEMKAA-GFEPDKVTFNSL 296
Query: 141 VDILGKVRQMDQMRALLEEMSKG----HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGT 196
+D+ GK R+ ++ +L+ M +VT N++ + + G E+A+ E+
Sbjct: 297 LDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSL---ISAYVKDGLLEEALELKQEMEF 353
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFI--HG------- 246
G++ + T L+ L + GK++ A + + E+ ++ PN T+N I HG
Sbjct: 354 RGMKPDVVTYTTLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTE 413
Query: 247 -------------------WCKI------NRVD-EAQWTIQEMKGHGCHPCVISYSTIIQ 280
W + N +D E +EMK G P +Y ++I
Sbjct: 414 MMAVFDDLRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLIS 473
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
SY R F + E+ M G P++ TY V+S LA+ G +E+A ++ +M KP
Sbjct: 474 SYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMVDRDCKP 533
Query: 341 DSRFFNCLIYTLGRASR------VQEAVYVYQVE------------------MPENGVA- 375
D ++ L++ A + + E +Y ++E +PE A
Sbjct: 534 DELSYSSLLHAYANAKKLDKMKTLSEDIYAERIERHNWLVKTLVLVNNKVNNLPETEKAF 593
Query: 376 ---------PDTSTFNTMITMFSHHGHHEKAFHVLEEM--NKLEHCKPNVQTFHPLLKSC 424
D + N M++++ + +K VL M N + H + T++ L+
Sbjct: 594 QELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLSLMMENSINH---SAATYNSLMHMY 650
Query: 425 FKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
+ G ++C S L + + + D +Y VI+ R + + A LF EM + P
Sbjct: 651 SRLGDCEKCESILTE--IKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKP 708
Query: 485 RYQTCRLILDEVKQKHMYDAA 505
T + + M++ A
Sbjct: 709 DIVTYNIFIKSYVANIMFEEA 729
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 108/250 (43%), Gaps = 42/250 (16%)
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
HP V+ T I+ + R ++ +L+ A P+ YT ++S +++G F +A+
Sbjct: 152 HPRVLP--TAIRVFARAGCLAEASAILEAAPA----PDASAYTALVSAFSRAGRFRDAVA 205
Query: 329 ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF 388
+ ++M G +P +N + + + S + V M E+G+ D T+NT+I+
Sbjct: 206 VFQRMVDGGVQPALVTYNVVFHAYSKMSVPWKEVVALVDSMKEDGIERDRYTYNTLISCC 265
Query: 389 SHHGHHEKAFHVLEEM--------------------------------NKLEH--CKPNV 414
G H +A V +EM ++E+ C P+V
Sbjct: 266 RRRGLHREAAQVFDEMKAAGFEPDKVTFNSLLDVYGKARKHEEAIGVLKRMENAGCTPSV 325
Query: 415 QTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLF 474
T++ L+ + K G +E L L + + D+ TYT +I GL R K + A +
Sbjct: 326 VTYNSLISAYVKDGLLEEALE--LKQEMEFRGMKPDVVTYTTLISGLDRVGKIDAALATY 383
Query: 475 KEMIGHDITP 484
EM+ + +P
Sbjct: 384 SEMVRNGCSP 393
>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Brachypodium distachyon]
Length = 801
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 162/332 (48%), Gaps = 7/332 (2%)
Query: 179 SGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS--CIPPN 236
S AG+ ++AV F +G F N + L G + LA +++ + S C+P N
Sbjct: 155 SSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVILLALALYNRMVSSGCLP-N 213
Query: 237 AHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLD 296
+ T+ + + G CK +A EM G P V Y+ ++ S C + LL
Sbjct: 214 STTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLC 273
Query: 297 EMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRAS 356
M+ GCPP+ VTYT +S L K+G +EA E ++ G ++CLI L +A
Sbjct: 274 SMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAG 333
Query: 357 RVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQT 416
R E + Y EM ++PD + + +I F+ G + AF +L+EM K + P+
Sbjct: 334 RFDEGL-SYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEM-KDKGFVPDTFC 391
Query: 417 FHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKE 476
++ LLK+ F G D S L+ +M+ ++++ LD TT+ ++I GLC+ + A +F E
Sbjct: 392 YNTLLKALFDVGNIDRAQS-LMSEML-QNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDE 449
Query: 477 MIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
M H P T ++D + + M + A +
Sbjct: 450 MGEHGCHPTVMTYNALIDGLYRAGMLEEARML 481
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 173/389 (44%), Gaps = 51/389 (13%)
Query: 160 MSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV 219
+S G + T +M G DA++ FDE+ G+ + + +LL +LC EG++
Sbjct: 206 VSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRI 265
Query: 220 ELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTI 278
E A + +K + PP+ T+ +F+ G CK RVDEA + ++ G +I YS +
Sbjct: 266 EDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCL 325
Query: 279 IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
I + F + EM + P++ YT ++ A++G ++A + ++MK G
Sbjct: 326 IDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGF 385
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
PD+ +N L+ L + A + EM +N V D++T N MI G +KA
Sbjct: 386 VPDTFCYNTLLKALFDVGNIDRAQSLMS-EMLQNNVVLDSTTHNIMICGLCKKGLIDKAM 444
Query: 399 HVLEEMNKLEH-CKPNVQTFHPLLKSCFKTG----------------------------- 428
V +EM EH C P V T++ L+ ++ G
Sbjct: 445 QVFDEMG--EHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLTLGAN 502
Query: 429 --KTDECLSQLLDDM-----VNKHHLSL----------DITTYTLVIHGLCRANKCEWAY 471
+ E L +L+D M V K + L D+ TY +I+GLC+A + A
Sbjct: 503 QVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGAL 562
Query: 472 LLFKEMIGHDITPRYQTCRLILDEVKQKH 500
LFKE+ I+P T ++D + + H
Sbjct: 563 RLFKELQLKGISPDEITYGTLIDGLWRAH 591
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 132/525 (25%), Positives = 228/525 (43%), Gaps = 97/525 (18%)
Query: 41 IESYCSDGARLDHHQVLCVDSPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSH 100
+ S C++G D ++LC S G DEV ++ +C A +
Sbjct: 256 LSSLCNEGRIEDAGRLLC-------------SMKENGCPPDEVTYTVFLSGLCKAGR--- 299
Query: 101 YLVNKLIHRFK--DDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLE 158
V++ HRF+ D LG+ + SC ++D L + + D+ +
Sbjct: 300 --VDEAFHRFELLQDGGFTLGLIGY--SC------------LIDGLFQAGRFDEGLSYYT 343
Query: 159 EMSKGHI---VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK 215
EM I +TL TI ++RRF+ AG+ +DA DE+ G +T N LL L
Sbjct: 344 EMLGKSISPDITLYTI--LIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFD 401
Query: 216 EGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVIS 274
G ++ A+S+ E L++ + ++ T NI I G CK +D+A EM HGCHP V++
Sbjct: 402 VGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMT 461
Query: 275 YSTIIQSY------------------------------------------------CRQY 286
Y+ +I C+
Sbjct: 462 YNALIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSG 521
Query: 287 NFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFN 346
K Y+LL + G P+VVTY T+++ L K+ + + A+R+ +++++ G PD +
Sbjct: 522 QVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYG 581
Query: 347 CLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV-LEEMN 405
LI L RA R +A ++Q + +G P +NTM+ +A ++ L+ +
Sbjct: 582 TLIDGLWRAHRENDATMLFQ-NILRSGGFPSLPIYNTMMRSLCRMKKLSQAINLWLDYLP 640
Query: 406 KLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRAN 465
K + P + + CF+ G DE + +L+ +++ + SL+ YT+ + GLC+
Sbjct: 641 KKYNLSPEDEVIANA-RKCFEDGFLDETVKELIK--IDQVYGSLNPNPYTIWVIGLCQVR 697
Query: 466 KCEWAYLLFK--EMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
K + A +F E G +TP C L+++ + +AA I
Sbjct: 698 KIDDALRIFHILEEFGIVVTP--ACCALLINYLCWDRNLNAAVDI 740
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 103/257 (40%), Gaps = 20/257 (7%)
Query: 259 TIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLA 318
+ + + G ++ ++ ++ + E M C P Y V L
Sbjct: 131 ALADARAAGLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLV 190
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDT 378
G A+ + +M G P+S + L+ L + +A+ ++ EM E G+ PD
Sbjct: 191 DRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFD-EMLERGIVPDV 249
Query: 379 STFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLL 438
+ +++ + G E A +L M K C P+ T+ L K G+ DE +
Sbjct: 250 KIYTVLLSSLCNEGRIEDAGRLLCSM-KENGCPPDEVTYTVFLSGLCKAGRVDEAFHRF- 307
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP-------------- 484
+++ +L + Y+ +I GL +A + + + EM+G I+P
Sbjct: 308 -ELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAE 366
Query: 485 --RYQTCRLILDEVKQK 499
R + L+LDE+K K
Sbjct: 367 AGRTKDAFLLLDEMKDK 383
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 63/142 (44%), Gaps = 3/142 (2%)
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
G+ ++ F ++ S G H++A M + C+P ++ + + G
Sbjct: 139 GLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFD-CRPTAFVYNAVFQVLVDRGVILL 197
Query: 433 CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLI 492
L+ L + MV+ L + TTY +++ GLC+ A +F EM+ I P + ++
Sbjct: 198 ALA-LYNRMVSSGCLP-NSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVL 255
Query: 493 LDEVKQKHMYDAAEKIEAVMKK 514
L + + + A ++ MK+
Sbjct: 256 LSSLCNEGRIEDAGRLLCSMKE 277
>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 118/458 (25%), Positives = 208/458 (45%), Gaps = 48/458 (10%)
Query: 88 KQDHVCNAIQPSHYLVNKLIHRFKDDWKS--ALGIFRWAGSCPGYEHSSEIYEMMVDILG 145
KQ C+ P + +IH F ++ ++ A +F + G + Y +++D L
Sbjct: 256 KQGGACS---PDVVAYSTVIHGFFNEGETGKACSLFHEM-TRQGVKPDVVTYNLIIDALC 311
Query: 146 KVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTE 204
K R MD+ +L +M+ G T + ++ ++ G+ ++A + F E+ GL N
Sbjct: 312 KARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIV 371
Query: 205 TMNLLLDTLCKEGKVELAR-----------------------------------SVFLEL 229
T N L +LCK G+ + A +F +
Sbjct: 372 TCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSM 431
Query: 230 KS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
KS I N H F I IH + K VD+A EM+ G P V++YST+I ++ R
Sbjct: 432 KSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRL 491
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG-SKPDSRFFNC 347
+ E ++M A+G PN Y++++ G +A + +M G +PD FF+
Sbjct: 492 TDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSS 551
Query: 348 LIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKL 407
+I +L + RV +A ++ + + G P TFN++I + G +KAF +L+ M ++
Sbjct: 552 VINSLCKDGRVMDAHDIFDLA-TDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAM-EV 609
Query: 408 EHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKC 467
+P++ T++ LL FK G+ ++ L+ L +M + + + TY +++ GL RA +
Sbjct: 610 VGVEPDIVTYNTLLDGYFKNGRINDGLT-LFREM-QRKGVKPNTVTYGIMLAGLFRAGRT 667
Query: 468 EWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
A F EMI T +IL + + + D A
Sbjct: 668 VAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEA 705
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 112/454 (24%), Positives = 207/454 (45%), Gaps = 38/454 (8%)
Query: 41 IESYCSDGARLDHHQVLCVDSPRLPDIDVIISK--VHVGSSEDEVFQSLKQDHVCNAIQP 98
+ ++C+ +D C R PD+ + + + G D++ + +C A
Sbjct: 154 VPTFCTYNILMD-----CCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYA-NR 207
Query: 99 SHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLE 158
+ VN L+HR + G P S + + + D R +D LL+
Sbjct: 208 TEEAVNVLLHRMSE-----------LGCVPNAVSYSIVLKALCDNSMSQRALD----LLQ 252
Query: 159 EMSK-GHIVTLNTIA--KVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK 215
M+K G + + +A V+ F G+ A F E+ G++ + T NL++D LCK
Sbjct: 253 MMAKQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCK 312
Query: 216 EGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVIS 274
++ A V ++ + P+ T++ IHG+ + R+ EA +EMK G P +++
Sbjct: 313 ARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVT 372
Query: 275 YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
++ + S C+ + E D M A+G P++ +Y T++ A G F + I + MK
Sbjct: 373 CNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMK 432
Query: 335 IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHH 394
G + F LI+ + V +A+ ++ EM + GV+PD T++T+I+ FS G
Sbjct: 433 SNGIAANCHVFTILIHAYAKRGMVDDAMLIF-TEMQQQGVSPDVVTYSTVISTFSRMGRL 491
Query: 395 EKAFHVLEEMNKL--EHCKPNVQTFHPLLKS-CFKTGKTDECLSQLLDDMVNKHHLSLDI 451
A +E+ N++ +PN + +++ C G +L+ +M+NK DI
Sbjct: 492 TDA---MEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKA--KELVSEMINKGIPRPDI 546
Query: 452 TTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
++ VI+ LC+ + A+ +F + DI R
Sbjct: 547 VFFSSVINSLCKDGRVMDAHDIFD--LATDIGER 578
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/393 (21%), Positives = 181/393 (46%), Gaps = 10/393 (2%)
Query: 97 QPSHYLVNKLIHRFKDD--WKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMR 154
+P + L+H + + + +G+F S G + ++ +++ K +D
Sbjct: 402 KPDIFSYCTLLHGYASEGCFADMIGLFNSMKS-NGIAANCHVFTILIHAYAKRGMVDDAM 460
Query: 155 ALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTL 213
+ EM + G + T + V+ FS G+ DA+ F+++ G++ NT + ++
Sbjct: 461 LIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGF 520
Query: 214 CKEGKVELARSVFLEL-KSCIP-PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPC 271
C G + A+ + E+ IP P+ F+ I+ CK RV +A G P
Sbjct: 521 CMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPG 580
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
VI+++++I YC K +++LD M+ G P++VTY T++ K+G + + +
Sbjct: 581 VITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFR 640
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHH 391
+M+ G KP++ + ++ L RA R A + EM E+G S + ++ +
Sbjct: 641 EMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFH-EMIESGTTVTVSIYGIILGGLCRN 699
Query: 392 GHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDI 451
++A + +++ + + K ++ + ++ + +K + +E ++ L ++ L +
Sbjct: 700 NCADEAIILFQKLGTM-NVKFSITILNTMINAMYKVQRKEE--AKELFATISASGLLPNE 756
Query: 452 TTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
+TY ++I L + E A +F M I P
Sbjct: 757 STYGVMIINLLKDGGVEDANNMFSSMEKSGIVP 789
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 123/271 (45%), Gaps = 11/271 (4%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
+ ++D V +MD+ +L+ M + IVT NT+ + + G+ D + F
Sbjct: 584 FNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTL---LDGYFKNGRINDGLTLFR 640
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKIN 251
E+ G++ NT T ++L L + G+ AR F E+ +S + I + G C+ N
Sbjct: 641 EMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNN 700
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
DEA Q++ + +T+I + + + EL + A G PN TY
Sbjct: 701 CADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYG 760
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV-YVYQVEMP 370
++ L K G E+A + M+ G P SR N +I L + +A Y+ +V+
Sbjct: 761 VMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGK 820
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVL 401
+ + ST + M+++FS G +++ +L
Sbjct: 821 R--ILLEASTTSLMLSLFSRKGKYQEDIKLL 849
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 112/248 (45%), Gaps = 6/248 (2%)
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI 329
P +Y+ ++ CR L + G + +T T++ L + EEA+ +
Sbjct: 155 PTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVNV 214
Query: 330 T-EKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV-APDTSTFNTMITM 387
+M +G P++ ++ ++ L S Q A+ + Q+ + G +PD ++T+I
Sbjct: 215 LLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHG 274
Query: 388 FSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHL 447
F + G KA + EM + + KP+V T++ ++ + K D+ ++L+ +
Sbjct: 275 FFNEGETGKACSLFHEMTR-QGVKPDVVTYNLIIDALCKARAMDK--AELVLRQMTTDGA 331
Query: 448 SLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAE 506
D TY+ +IHG + + A +F+EM + P TC L + K +AAE
Sbjct: 332 QPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAE 391
Query: 507 KIEAVMKK 514
+++ K
Sbjct: 392 FFDSMTAK 399
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/301 (20%), Positives = 127/301 (42%), Gaps = 11/301 (3%)
Query: 38 SSPIESYCSDGARLDHHQV--LCVDSPRLPDI---DVIISKVHVGSSEDEVFQSLKQDHV 92
SS I S C DG +D H + L D P + + +I + D+ F+ L V
Sbjct: 550 SSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEV 609
Query: 93 CNAIQPSHYLVNKLIHRFKDDWK--SALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQM 150
++P N L+ + + + L +FR G + ++ Y +M+ L + +
Sbjct: 610 V-GVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQR-KGVKPNTVTYGIMLAGLFRAGRT 667
Query: 151 DQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLL 209
R EM G VT++ ++ ++A+ F +LGT ++ + +N +
Sbjct: 668 VAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTM 727
Query: 210 LDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGC 268
++ + K + E A+ +F + S + PN T+ + I K V++A M+ G
Sbjct: 728 INAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGI 787
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
P + II+ + +K L ++ + T + ++S ++ G ++E I+
Sbjct: 788 VPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYQEDIK 847
Query: 329 I 329
+
Sbjct: 848 L 848
>gi|224136626|ref|XP_002322376.1| predicted protein [Populus trichocarpa]
gi|222869372|gb|EEF06503.1| predicted protein [Populus trichocarpa]
Length = 715
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 168/338 (49%), Gaps = 9/338 (2%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC--IPPNAHT 239
G + A +E+ G + N T L+D LCK+G E A +FL+L PN HT
Sbjct: 315 GSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHT 374
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+ IHG+CK ++++ A+ + MK G P +Y+ +I + + NF K YEL+D M
Sbjct: 375 YTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMG 434
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
+G N+ TY + L K G F EA ++ +K +G + D+ + LI L R + +
Sbjct: 435 KEGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLGLQADTVTYTILISELCRRADTR 494
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
EA+ V+ +M + GV PD T+NT+I FS E++ + E L P +T+
Sbjct: 495 EAL-VFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESEKLFAEAVGLGLV-PTKETYTS 552
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
++ C + L+ + ++ H + D TY +I GLC+ +K + A L++ M+
Sbjct: 553 MI--CGYCRDRNVSLALKFFNRMSDHGCTPDSLTYGALISGLCKESKLDEACQLYEAMVD 610
Query: 480 HDITPRYQTCRLIL--DEVKQKHMYDAAEKIEAVMKKL 515
++P + RL L + KQ A +E + KKL
Sbjct: 611 KGLSP-CEVTRLTLAYEYCKQDDSATAMVILERLDKKL 647
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 93/431 (21%), Positives = 180/431 (41%), Gaps = 55/431 (12%)
Query: 117 ALGIFRWAGSCPGYEHSSEIYEM-MVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVM 175
AL F WA P + + Y + +G E + H V + ++
Sbjct: 124 ALSFFNWAIGFPKFRYFMRFYIVCATSFIGN-----------ENFERAHEV----MDCMV 168
Query: 176 RRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIP 234
R F+ G++++AV E+ GL T+N + + G V A +VF E++ +
Sbjct: 169 RVFAEIGKFQEAVNMVIEMENHGLVLTVRTLNCVTGVAGEMGLVGYAENVFDEMRVRGVC 228
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYEL 294
P++ ++ + +C++ R+ + +++M G + + +I ++C + S+V+
Sbjct: 229 PDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKGFASRVFWY 288
Query: 295 LDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGR 354
D+ G PN++ +T++++ L K G ++A + E+M G KP+ LI L +
Sbjct: 289 FDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCK 348
Query: 355 ASRVQEAVYVY-----------------------------------QVEMPENGVAPDTS 379
++A ++ M E G+ P+T
Sbjct: 349 KGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTK 408
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLD 439
T+ +I S G+ EKA+ +++ M K E N+ T++ + S K G+ E L
Sbjct: 409 TYTCLIDGHSKAGNFEKAYELMDLMGK-EGFSANIFTYNAFIDSLCKKGRFLEACKLLKK 467
Query: 440 DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQK 499
+ L D TYT++I LCR A + F +M + P T ++ ++
Sbjct: 468 GF--RLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQ 525
Query: 500 HMYDAAEKIEA 510
+ +EK+ A
Sbjct: 526 RRMEESEKLFA 536
>gi|224133318|ref|XP_002321537.1| predicted protein [Populus trichocarpa]
gi|222868533|gb|EEF05664.1| predicted protein [Populus trichocarpa]
Length = 834
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 174/361 (48%), Gaps = 12/361 (3%)
Query: 66 DIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAG 125
++ I+ ++ G S +E +L C+ Y N+++ + +D ALG F W
Sbjct: 278 NVSQILRQLRWGPSAEEALVNLN----CHM---DAYQANQVLKQLQDH-TVALGFFHWLK 329
Query: 126 SCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQW 184
PG++H Y MV ILG+ +Q + LL++M + G T+ T +++ + A
Sbjct: 330 QLPGFKHDGYTYTTMVGILGRAKQFVAINKLLDQMVRDGCQPTVVTYNRLIHSYGRANYL 389
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIF 243
DAV F+++ G E + T L+D K G + A ++ +++ + P+ T+++
Sbjct: 390 NDAVEVFNQMQKAGCEPDRVTYCTLIDIHAKAGFLNFAMEMYQRMQAAGLSPDTFTYSVM 449
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
I+ K + A EM GC P +++Y+ +I + N+ +L +MQ G
Sbjct: 450 INCLGKAGHLAAADKLFCEMIEQGCVPNLVTYNIMIALQAKARNYQNALKLYRDMQNAGF 509
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
P+ VTY+ VM L SG +EA I +MK PD + L+ G+A V++A
Sbjct: 510 EPDKVTYSIVMEVLGHSGYLDEAEAIFSEMKRKNWVPDEPVYGLLVDLWGKAGNVEKAWE 569
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
YQ M G+ P+ T N++++ F A+++L+ M L P++QT+ LL
Sbjct: 570 WYQA-MLHAGLCPNVPTCNSLLSAFLRVNRLPDAYNLLQSMLNL-GLNPSLQTYTLLLSC 627
Query: 424 C 424
C
Sbjct: 628 C 628
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 128/255 (50%), Gaps = 5/255 (1%)
Query: 260 IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK 319
+ +M GC P V++Y+ +I SY R + E+ ++MQ GC P+ VTY T++ AK
Sbjct: 361 LDQMVRDGCQPTVVTYNRLIHSYGRANYLNDAVEVFNQMQKAGCEPDRVTYCTLIDIHAK 420
Query: 320 SGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTS 379
+G A+ + ++M+ G PD+ ++ +I LG+A + A ++ EM E G P+
Sbjct: 421 AGFLNFAMEMYQRMQAAGLSPDTFTYSVMINCLGKAGHLAAADKLF-CEMIEQGCVPNLV 479
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLD 439
T+N MI + + +++ A + +M +P+ T+ +++ +G DE +
Sbjct: 480 TYNIMIALQAKARNYQNALKLYRDMQNAGF-EPDKVTYSIVMEVLGHSGYLDEA-EAIFS 537
Query: 440 DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE-VKQ 498
+M K+ + D Y L++ +A E A+ ++ M+ + P TC +L ++
Sbjct: 538 EMKRKNWVP-DEPVYGLLVDLWGKAGNVEKAWEWYQAMLHAGLCPNVPTCNSLLSAFLRV 596
Query: 499 KHMYDAAEKIEAVMK 513
+ DA +++++
Sbjct: 597 NRLPDAYNLLQSMLN 611
>gi|255660882|gb|ACU25610.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
Length = 484
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 193/388 (49%), Gaps = 14/388 (3%)
Query: 100 HYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEE 159
H LV ++H K + AL FRW +EH+ E + +++ILG+ +++ R +L +
Sbjct: 12 HELVYNVLHSSKTS-EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLD 70
Query: 160 M-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
M KG + ++ + G +++V+ F ++ G+E+ ++ N L + + G+
Sbjct: 71 MPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGR 130
Query: 219 VELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
+A+ F + L I P HTFN+ I G+ +V+ A ++MK P V++Y+T
Sbjct: 131 YMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNT 190
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+I Y R + + EM+ + P VVTYTT++ ++A+R+ E+MK G
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFG 250
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP-DTSTFNTMITMFSHHGHHEK 396
KP++ ++ L+ L A ++ EA + + EM + +AP D S F +I+ G+ +
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMSEARVILK-EMMDKYLAPTDNSIFMRLISSHCKSGNLDA 309
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK-------HHLSL 449
A VL+ M +L + L+++ K G+ D+ + +LLD ++ K L L
Sbjct: 310 AADVLKAMIRLS-VPTEAGHYGXLIENFCKVGQYDKAV-KLLDKLIEKDIILRPQSTLHL 367
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEM 477
+ + Y +I LC + A L +++
Sbjct: 368 EPSAYNPMIEYLCNNGQAXKAETLVRQL 395
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 127/267 (47%), Gaps = 6/267 (2%)
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
+ ++++ A+ + +M G + +I SY ++ + ++ +M+ G +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIK 116
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
+Y + + + G + A R KM G +P FN +I+ + +V+ A ++ +
Sbjct: 117 SYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFE-D 175
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M ++PD T+NTMI + E+A EM K + +P V T+ L+K
Sbjct: 176 MKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEM-KGRNIEPTVVTYTTLIKGYVSVD 234
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ D+ L +L+++M + + TY+ ++ GLC A K A ++ KEM+ + P +
Sbjct: 235 QVDDAL-RLVEEM-KGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNS 292
Query: 489 C--RLILDEVKQKHMYDAAEKIEAVMK 513
RLI K ++ AA+ ++A+++
Sbjct: 293 IFMRLISSHCKSGNLDAAADVLKAMIR 319
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 5/205 (2%)
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N T+ ++ L ++ A I M G + D + +I + G+ VQE+V ++
Sbjct: 44 NRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMF 103
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
Q +M E GV ++N + + G + A +M E +P TF+ ++ F
Sbjct: 104 Q-KMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLS-EGIEPTRHTFNVMIWGFF 161
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
+GK E ++ +DM ++ +S D+ TY +I+G R K E A F EM G +I P
Sbjct: 162 LSGKV-ETANRFFEDMKSRE-ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPT 219
Query: 486 YQT-CRLILDEVKQKHMYDAAEKIE 509
T LI V + DA +E
Sbjct: 220 VVTYTTLIKGYVSVDQVDDALRLVE 244
>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
Length = 795
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 191/409 (46%), Gaps = 41/409 (10%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++D L K + MD+ A+L+ M KG + T ++R + GQ E+AVR ++
Sbjct: 238 YNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMS 297
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVF----------------------------- 226
GL+ + T +LL+ CK G+ ARSVF
Sbjct: 298 GSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALI 357
Query: 227 -------LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
L ++ IP FNI I + K VD+A EM+ +G P V+SYST+I
Sbjct: 358 DVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVI 417
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
C+ ++M ++G PN++++T+++ L G++++ + +M G
Sbjct: 418 HILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIH 477
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
PD+ F N ++ L + RV EA + + + GV PD ++NT+I + G +++
Sbjct: 478 PDAIFMNTIMDNLCKEGRVVEAQDFFDMVI-HIGVKPDVVSYNTLIDGYCFVGKMDESIK 536
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIH 459
L+ M + +P+ T++ LL FK G+ ++ L+ L +M K IT+ +++H
Sbjct: 537 QLDRMVSI-GLRPDSWTYNSLLNGYFKNGRVEDALA-LYREMFRKDVKFCAITS-NIMLH 593
Query: 460 GLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
GL +A + A L+ +M+ R +T +L + + D A ++
Sbjct: 594 GLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRM 642
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 157/320 (49%), Gaps = 6/320 (1%)
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRV 253
G + N + N ++D KEG+V+ A +F E+ +PP+ T+N I G CK +
Sbjct: 192 GGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAM 251
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
D+A +Q M G P +Y+ +I+ YC + LL +M G P+VVTY+ +
Sbjct: 252 DKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLL 311
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
+ Y K G EA + + M G KP+S ++ L++ + + + + M +G
Sbjct: 312 IQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDL-MIRDG 370
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
+ + FN +I ++ HG +KA EM + +P+V ++ ++ KTG+ ++
Sbjct: 371 IPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQ-NGLRPDVVSYSTVIHILCKTGRVEDA 429
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
+ + MV++ LS +I ++T +IHGLC + + L EMI I P I+
Sbjct: 430 VYH-FNQMVSE-GLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIM 487
Query: 494 DEV-KQKHMYDAAEKIEAVM 512
D + K+ + +A + + V+
Sbjct: 488 DNLCKEGRVVEAQDFFDMVI 507
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 160/334 (47%), Gaps = 5/334 (1%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTF 240
G + A+ F E+ GL + + + ++ LCK G+VE A F ++ S + PN +F
Sbjct: 389 GAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISF 448
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
IHG C I + + EM G HP I +TI+ + C++ + + D +
Sbjct: 449 TSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIH 508
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
G P+VV+Y T++ G +E+I+ ++M +G +PDS +N L+ + RV++
Sbjct: 509 IGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVED 568
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
A+ +Y+ EM V T N M+ G A + +M + ++T++ +
Sbjct: 569 ALALYR-EMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVD-RGTQLRIETYNTV 626
Query: 421 LKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH 480
L + DE L ++ +D+ +K LD+ T+++VI+ L + + + A LF M+
Sbjct: 627 LGGLCENSCVDEAL-RMFEDLRSK-EFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLR 684
Query: 481 DITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
P T L++ ++ + + ++ + M+K
Sbjct: 685 GPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEK 718
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 153/326 (46%), Gaps = 13/326 (3%)
Query: 144 LGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWED----AVRTFDELGTFGL 199
LG+ ++ LL + + N++ V+ R + AV F+ + G+
Sbjct: 28 LGREDALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMVRSGV 87
Query: 200 EKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEA-Q 257
+ +L+ C G+++LA + F K+ T N I G C NR D+A
Sbjct: 88 NMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLCDGNRTDDAMD 147
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG---CPPNVVTYTTVM 314
+ M G P V SY+ +I+ C + + ELL M A G C PNVV+Y TV+
Sbjct: 148 MVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVI 207
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
K G+ ++A + +M G PD +N LI L +A + +AV + Q M + GV
Sbjct: 208 DGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQ-HMFDKGV 266
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
PDT T+N MI + G E+A +L++M+ +P+V T+ L++ K G+ E
Sbjct: 267 MPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSG-SGLQPDVVTYSLLIQYYCKIGRCAEAR 325
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHG 460
S + D MV K + T Y +++HG
Sbjct: 326 S-VFDSMVRKGQ-KPNSTIYHILLHG 349
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 117/262 (44%), Gaps = 3/262 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++D V +MD+ L+ M S G T ++ + G+ EDA+ + E+
Sbjct: 518 YNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMF 577
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
++ T N++L L + G++ AR +++++ T+N + G C+ + VD
Sbjct: 578 RKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVD 637
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA ++++ V ++S +I + + + L M +G P+V+TY+ ++
Sbjct: 638 EALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMI 697
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
+ G EE+ + M+ G DS N ++ L V+ A Y ++ E
Sbjct: 698 KSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRA-GTYLTKIDEKNF 756
Query: 375 APDTSTFNTMITMFSHHGHHEK 396
+ + ST +I + S + ++
Sbjct: 757 SLEASTAALLIPIVSEKKYQKE 778
>gi|302781572|ref|XP_002972560.1| hypothetical protein SELMODRAFT_32515 [Selaginella moellendorffii]
gi|300160027|gb|EFJ26646.1| hypothetical protein SELMODRAFT_32515 [Selaginella moellendorffii]
Length = 341
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 171/342 (50%), Gaps = 12/342 (3%)
Query: 170 TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--L 227
T + ++R + G+ A+ + + + N + N++L LCK GK + A + +
Sbjct: 6 TYSTIVRGYCEDGETRQALALLEHMKNAEVPANAKLYNIILTHLCKHGKEKEALDLLHSM 65
Query: 228 ELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYN 287
SC P+ +T+NI I+ CK+ R+++AQ ++ M+ C +++Y+T+I CR+ N
Sbjct: 66 ATTSC-APDIYTYNILINALCKVGRLEDAQGLVEMMQARDCPTDIVTYNTLIHGLCRKGN 124
Query: 288 ----FSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSR 343
+ + L +EM +G P VTYT V+ L + E+A ++ + M G D
Sbjct: 125 GRFRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMHENGCAFDLV 184
Query: 344 FFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEE 403
+N LI +A + +A+ ++ VEMP G PD T+N+++ F G E+A + E
Sbjct: 185 TYNMLINRFAKAGMMDKAMDLF-VEMPTRGCIPDVVTYNSVVDGFCKAGKVEEANKLFAE 243
Query: 404 MNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCR 463
M K PN +T+ + +C K G+ + + L++ + K L +D +Y +I +C+
Sbjct: 244 M-KARGIFPNGRTYTSITDACLKAGRMQDAHAYLVE--MRKEGL-VDAISYVALISTICK 299
Query: 464 ANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
K + + L +EM+ P T ++ + + ++ D A
Sbjct: 300 LGKGKLGFQLLREMLEKGFKPNLVTFNVVFEALSKESNTDDA 341
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 134/311 (43%), Gaps = 45/311 (14%)
Query: 200 EKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQW 258
+ N T + ++ C++G+ A ++ +K+ +P NA +NI + CK + EA
Sbjct: 1 QANAFTYSTIVRGYCEDGETRQALALLEHMKNAEVPANAKLYNIILTHLCKHGKEKEALD 60
Query: 259 TIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLA 318
+ M C P + +Y+ +I + C+ L++ MQA+ CP ++VTY T++ L
Sbjct: 61 LLHSMATTSCAPDIYTYNILINALCKVGRLEDAQGLVEMMQARDCPTDIVTYNTLIHGLC 120
Query: 319 KSGD----FEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
+ G+ E A R+ E+M G P S + +I L R ++A V + M ENG
Sbjct: 121 RKGNGRFRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDL-MHENGC 179
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
A D T+N +I F+ G +KA + EM C P
Sbjct: 180 AFDLVTYNMLINRFAKAGMMDKAMDLFVEM-PTRGCIP---------------------- 216
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
D+ TY V+ G C+A K E A LF EM I P +T I D
Sbjct: 217 ---------------DVVTYNSVVDGFCKAGKVEEANKLFAEMKARGIFPNGRTYTSITD 261
Query: 495 E-VKQKHMYDA 504
+K M DA
Sbjct: 262 ACLKAGRMQDA 272
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 148/323 (45%), Gaps = 46/323 (14%)
Query: 152 QMRALLEEMSKGHIVTLNTIAKV-MRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLL 210
Q ALLE M + + + + G+ ++A+ + T + T N+L+
Sbjct: 22 QALALLEHMKNAEVPANAKLYNIILTHLCKHGKEKEALDLLHSMATTSCAPDIYTYNILI 81
Query: 211 DTLCKEGKVELARSV--FLELKSCIPPNAHTFNIFIHGWCKIN----RVDEAQWTIQEM- 263
+ LCK G++E A+ + ++ + C P + T+N IHG C+ RV+ A +EM
Sbjct: 82 NALCKVGRLEDAQGLVEMMQARDC-PTDIVTYNTLIHGLCRKGNGRFRVERAFRLFEEMV 140
Query: 264 -KGH---------------------------------GCHPCVISYSTIIQSYCRQYNFS 289
KGH GC +++Y+ +I + +
Sbjct: 141 DKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMHENGCAFDLVTYNMLINRFAKAGMMD 200
Query: 290 KVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
K +L EM +GC P+VVTY +V+ K+G EEA ++ +MK G P+ R + +
Sbjct: 201 KAMDLFVEMPTRGCIPDVVTYNSVVDGFCKAGKVEEANKLFAEMKARGIFPNGRTYTSIT 260
Query: 350 YTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH 409
+A R+Q+A + Y VEM + G+ D ++ +I+ G + F +L EM + +
Sbjct: 261 DACLKAGRMQDA-HAYLVEMRKEGLV-DAISYVALISTICKLGKGKLGFQLLREMLE-KG 317
Query: 410 CKPNVQTFHPLLKSCFKTGKTDE 432
KPN+ TF+ + ++ K TD+
Sbjct: 318 FKPNLVTFNVVFEALSKESNTDD 340
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 102/200 (51%), Gaps = 3/200 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G+ +S Y +++D L +V+ +Q + +L+ M G L T ++ RF+ AG + A
Sbjct: 143 GHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMHENGCAFDLVTYNMLINRFAKAGMMDKA 202
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHG 246
+ F E+ T G + T N ++D CK GKVE A +F E+K+ I PN T+
Sbjct: 203 MDLFVEMPTRGCIPDVVTYNSVVDGFCKAGKVEEANKLFAEMKARGIFPNGRTYTSITDA 262
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
K R+ +A + EM+ G ISY +I + C+ ++LL EM +G PN
Sbjct: 263 CLKAGRMQDAHAYLVEMRKEGLVD-AISYVALISTICKLGKGKLGFQLLREMLEKGFKPN 321
Query: 307 VVTYTTVMSYLAKSGDFEEA 326
+VT+ V L+K + ++A
Sbjct: 322 LVTFNVVFEALSKESNTDDA 341
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 93/212 (43%), Gaps = 43/212 (20%)
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
N TY+T++ + G+ +A+ + E MK
Sbjct: 2 ANAFTYSTIVRGYCEDGETRQALALLEHMK------------------------------ 31
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
E+P N +N ++T HG ++A +L M C P++ T++ L+ +
Sbjct: 32 -NAEVPANA-----KLYNIILTHLCKHGKEKEALDLLHSM-ATTSCAPDIYTYNILINAL 84
Query: 425 FKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRAN----KCEWAYLLFKEMIGH 480
K G+ ++ +Q L +M+ DI TY +IHGLCR + E A+ LF+EM+
Sbjct: 85 CKVGRLED--AQGLVEMMQARDCPTDIVTYNTLIHGLCRKGNGRFRVERAFRLFEEMVDK 142
Query: 481 DITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
TP T +++D + + M + A+K+ +M
Sbjct: 143 GHTPTSVTYTVVIDALLRVKMDEQAQKVLDLM 174
>gi|255660880|gb|ACU25609.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
Length = 484
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 193/388 (49%), Gaps = 14/388 (3%)
Query: 100 HYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEE 159
H LV ++H K + AL FRW +EH+ E + +++ILG+ +++ R +L +
Sbjct: 12 HELVYNVLHSSKTS-EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLD 70
Query: 160 M-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
M KG + ++ + G +++V+ F ++ G+E+ ++ N L + + G+
Sbjct: 71 MPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNXLFKVILRRGR 130
Query: 219 VELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
+A+ F + L I P HTFN+ I G+ +V+ A ++MK P V++Y+T
Sbjct: 131 YMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNT 190
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+I Y R + + EM+ + P VVTYTT++ ++A+R+ E+MK G
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFG 250
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP-DTSTFNTMITMFSHHGHHEK 396
KP++ ++ L+ L A ++ EA + + EM + +AP D S F +I+ G+ +
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMSEARVILK-EMMDKYLAPTDNSIFMRLISSHCKSGNLDA 309
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK-------HHLSL 449
A VL+ M +L + L+++ K G+ D+ + +LLD ++ K L L
Sbjct: 310 AADVLKAMIRLS-VPTEAGHYGXLIENFCKXGQYDKAV-KLLDKLIEKDIILRPQSTLHL 367
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEM 477
+ + Y +I LC + A L +++
Sbjct: 368 EPSAYNPMIEYLCNNGQAXKAETLVRQL 395
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 133/311 (42%), Gaps = 4/311 (1%)
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQ 257
E N ET +++ L + K+ AR + L++ K + + + + I + K V E+
Sbjct: 41 FEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESV 100
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
Q+M+ G + SY+ + + R+ + ++M ++G P T+ ++
Sbjct: 101 KMFQKMEELGVERTIKSYNXLFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGF 160
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
SG E A R E MK PD +N +I R +++EA Y VEM + P
Sbjct: 161 FLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEK-YFVEMKGRNIEPT 219
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
T+ T+I + + A ++EEM KPN T+ LL K E +
Sbjct: 220 VVTYTTLIKGYVSVDQVDDALRLVEEMKGF-GIKPNAITYSTLLPGLCNAEKMSEA-RVI 277
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVK 497
L +M++K+ D + + +I C++ + A + K MI + +++
Sbjct: 278 LKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGXLIENFC 337
Query: 498 QKHMYDAAEKI 508
+ YD A K+
Sbjct: 338 KXGQYDKAVKL 348
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 127/267 (47%), Gaps = 6/267 (2%)
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
+ ++++ A+ + +M G + +I SY ++ + ++ +M+ G +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIK 116
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
+Y + + + G + A R KM G +P FN +I+ + +V+ A ++ +
Sbjct: 117 SYNXLFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFE-D 175
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M ++PD T+NTMI + E+A EM K + +P V T+ L+K
Sbjct: 176 MKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEM-KGRNIEPTVVTYTTLIKGYVSVD 234
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ D+ L +L+++M + + TY+ ++ GLC A K A ++ KEM+ + P +
Sbjct: 235 QVDDAL-RLVEEM-KGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNS 292
Query: 489 C--RLILDEVKQKHMYDAAEKIEAVMK 513
RLI K ++ AA+ ++A+++
Sbjct: 293 IFMRLISSHCKSGNLDAAADVLKAMIR 319
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 5/205 (2%)
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N T+ ++ L ++ A I M G + D + +I + G+ VQE+V ++
Sbjct: 44 NRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMF 103
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
Q +M E GV ++N + + G + A +M E +P TF+ ++ F
Sbjct: 104 Q-KMEELGVERTIKSYNXLFKVILRRGRYMMAKRYFNKMLS-EGIEPTRHTFNVMIWGFF 161
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
+GK E ++ +DM ++ +S D+ TY +I+G R K E A F EM G +I P
Sbjct: 162 LSGKV-ETANRFFEDMKSRE-ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPT 219
Query: 486 YQT-CRLILDEVKQKHMYDAAEKIE 509
T LI V + DA +E
Sbjct: 220 VVTYTTLIKGYVSVDQVDDALRLVE 244
>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 597
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 172/352 (48%), Gaps = 49/352 (13%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +++D L K R+ D+ R L EEM +G T+ + +M WE+A R F+E+
Sbjct: 245 YSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLM--------WEEAKRLFNEMV 296
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRVD 254
G++ N T N+L+D LCKEGKV A+ + + ++ I PN T+N I G+C + ++
Sbjct: 297 NQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLN 356
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
A+ M GC P VI Y+ +I YC+ + +L + M G P+V TY ++
Sbjct: 357 SARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALL 416
Query: 315 SYLAKSGDFEEAIRITEKMKIVG-----------------------------------SK 339
+ L + G +A ++ MK+ G K
Sbjct: 417 TGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIK 476
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
D FNCLI L +A +++ A +++ ++P+ + PD T+N MI F G KA
Sbjct: 477 LDIECFNCLIDGLCKAGKLETAWELFE-KLPQEELQPDVVTYNIMIHEFCRGGQVVKANI 535
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDI 451
+ ++M K C P+ T+ L++ F++ K ++ + +LL MV + +SLD+
Sbjct: 536 LFQKMEK-NGCTPDKITYATLIRGFFESKKLEKVV-ELLHMMVQR-DVSLDV 584
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/418 (23%), Positives = 179/418 (42%), Gaps = 58/418 (13%)
Query: 138 EMMVDILGKVRQMDQMRALLEE-MSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGT 196
++++ L V ++ + A++ + +G+I + T +++ + A F +
Sbjct: 135 NILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQK 194
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-------CIPPNAHTFNIFIHGWCK 249
G N T L+ LC+ G + +A + E+ + P +++I I CK
Sbjct: 195 LGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCK 254
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
R DEA+ +EMK G P VISY++++ + + L +EM QG PNVVT
Sbjct: 255 DRREDEARDLFEEMKVQGMTPTVISYTSLM--------WEEAKRLFNEMVNQGVQPNVVT 306
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM 369
+ ++ L K G EA + E M G P+ +N LI + A ++ V M
Sbjct: 307 FNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELF-VSM 365
Query: 370 PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
P G PD + +I + E+A + M ++ +P+V+T+ LL F+ GK
Sbjct: 366 PSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGK-RPDVKTYGALLTGLFQGGK 424
Query: 430 TDE-------------------------------CLSQLLD--DMVNKHHLSLDITTYTL 456
+ CL + ++ + + +++ LDI +
Sbjct: 425 VGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNC 484
Query: 457 VIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE-------VKQKHMYDAAEK 507
+I GLC+A K E A+ LF+++ ++ P T +++ E VK ++ EK
Sbjct: 485 LIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEK 542
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 160/353 (45%), Gaps = 19/353 (5%)
Query: 168 LNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFL 227
L++ ++ + + ++++ G+ + T+N+LL+ LC +V +V
Sbjct: 96 LSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMA 155
Query: 228 E-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQY 286
L+ P+ T+ I G C +R+ +A M+ GC P I+Y T+++ CR
Sbjct: 156 GILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTG 215
Query: 287 NFSKVYELLDEMQAQGC------PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
N S +L EM P V++Y+ ++ L K +EA + E+MK+ G P
Sbjct: 216 NISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTP 275
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
+ L++ +EA ++ EM GV P+ TFN +I + G +A +
Sbjct: 276 TVISYTSLMW--------EEAKRLFN-EMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDL 326
Query: 401 LEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHG 460
LE M + PN+ T++ L++ G + +L M +K D+ YT++I+G
Sbjct: 327 LEVMIQ-RGIVPNLLTYNSLIEGFCLVGDLNSA-RELFVSMPSKG-CEPDVICYTVLING 383
Query: 461 LCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
C+ +K E A L+ M+ P +T +L + Q A+K+ VMK
Sbjct: 384 YCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMK 436
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 119/271 (43%), Gaps = 10/271 (3%)
Query: 67 IDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWA 124
IDV+ + V ++D L + + I P+ N LI F D SA +F
Sbjct: 311 IDVLCKEGKVIEAKD-----LLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSM 365
Query: 125 GSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQ 183
S G E Y ++++ K ++++ L M + G + T ++ G+
Sbjct: 366 PS-KGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGK 424
Query: 184 WEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNI 242
DA + F + +G+ + + L+ LCK G + A +F +LKS I + FN
Sbjct: 425 VGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNC 484
Query: 243 FIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
I G CK +++ A +++ P V++Y+ +I +CR K L +M+ G
Sbjct: 485 LIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNG 544
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
C P+ +TY T++ +S E+ + + M
Sbjct: 545 CTPDKITYATLIRGFFESKKLEKVVELLHMM 575
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 125/286 (43%), Gaps = 25/286 (8%)
Query: 214 CKEGKVELARSV---FLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHP 270
CK G + ++ L + S P +F + G KI + + +M+ G P
Sbjct: 70 CKTGNITAIQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEMQA---QGCPPNVVTYTTVMSYLAKSGDFEEAI 327
+ + ++ C N ++V E L M +G P++VTYTT++ L +A
Sbjct: 130 DCCTLNILLNCLC---NVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAA 186
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV-----APDTSTFN 382
+ +M+ +G P++ + L+ L R + A+ ++Q + ++ + P +++
Sbjct: 187 LLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYS 246
Query: 383 TMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMV 442
+I ++A + EEM K++ P V ++ L+ E +L ++MV
Sbjct: 247 IIIDALCKDRREDEARDLFEEM-KVQGMTPTVISYTSLMW---------EEAKRLFNEMV 296
Query: 443 NKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
N+ + ++ T+ ++I LC+ K A L + MI I P T
Sbjct: 297 NQ-GVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLT 341
>gi|225443946|ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 733
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/430 (26%), Positives = 194/430 (45%), Gaps = 21/430 (4%)
Query: 83 VFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVD 142
+ +SLK VC +Q + D + AL F WA Y H +Y M++
Sbjct: 95 LLRSLKPRQVCAVLQ------------LQTDERVALRFFYWADRQWRYRHDPIVYYAMLE 142
Query: 143 ILGKVRQMDQMRALLEEMSKGHIVTL-NTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEK 201
IL K + + +L M+K I VM +S AG+ +A+R + G+E
Sbjct: 143 ILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRVLTMMQKAGIEP 202
Query: 202 NTETMNLLLDTLCKEGKVELARSVFLELKSC--IPPNAHTFNIFIHGWCKINRVDEAQWT 259
+ N + L +++ A FLE I PN T+N I G+C ++R+++A
Sbjct: 203 DLSICNTAIHVLVMGNRLDKAVR-FLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMEL 261
Query: 260 IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM-QAQGCPPNVVTYTTVMSYLA 318
I EM GC P ISY T++ C++ +V L+++M + P+ VTY T + L+
Sbjct: 262 IAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLS 321
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDT 378
K G +EA+ + + + D ++ ++++ R R+ +A + EM G PD
Sbjct: 322 KHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVN-EMFSKGCIPDV 380
Query: 379 STFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLL 438
T+ ++I ++A +L +M K CKPN ++ LL K G + E +
Sbjct: 381 VTYTSVINGLCQERKVDQAKKMLRQMYK-HGCKPNTVSYTALLNGLCKNGNSLEAREMM- 438
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQ 498
+M + + TY++++HG R K A L +EMI P L++ + Q
Sbjct: 439 -NMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQ 497
Query: 499 KHMYDAAEKI 508
+ D A++
Sbjct: 498 EEKVDEAKRF 507
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 112/451 (24%), Positives = 210/451 (46%), Gaps = 36/451 (7%)
Query: 65 PDIDVIISKVHV---GSSEDEVFQSLKQDHVCNAIQPSHYLVNKLI------HRFKDDWK 115
PD+ + + +HV G+ D+ + L++ + I+P+ N LI HR +D +
Sbjct: 202 PDLSICNTAIHVLVMGNRLDKAVRFLERMQIVE-IEPNVITYNCLIKGYCDLHRLEDAME 260
Query: 116 SALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGH-----IVTLNT 170
+ + G P Y ++ L K +++ ++R L+E+M K VT NT
Sbjct: 261 -LIAEMPFKGCSP----DKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNT 315
Query: 171 IAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL- 229
++ S G ++A+ E + + ++ + C+EG+++ A+ + E+
Sbjct: 316 FVHML---SKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMF 372
Query: 230 -KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
K CIP + T+ I+G C+ +VD+A+ +++M HGC P +SY+ ++ C+ N
Sbjct: 373 SKGCIP-DVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNS 431
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
+ E+++ + PN +TY+ +M + G EA + +M G P N L
Sbjct: 432 LEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLL 491
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
I +L + +V EA + + NG A + F T+I F E A +L++M L
Sbjct: 492 IQSLCQEEKVDEAKR-FMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMY-LS 549
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
+ P+V T+ ++ + K G+ +E ++L M+ + +T Y VIH CR + E
Sbjct: 550 NKHPDVVTYTTIIDALGKKGRIEEA-TKLAMKMLRVGLIPTPVT-YRTVIHQYCRMGRVE 607
Query: 469 WAYLLFKEMIGHDITPRYQTCRLILDEVKQK 499
L ++M+ Q CR ++V +K
Sbjct: 608 DLLKLLEKMLSR------QECRTAYNQVIEK 632
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 144/317 (45%), Gaps = 41/317 (12%)
Query: 149 QMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN 207
+MD+ + ++ EM SKG I + T V+ + + A + ++ G + NT +
Sbjct: 360 RMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYT 419
Query: 208 LLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGW------------------- 247
LL+ LCK G AR + + + PNA T+++ +HG+
Sbjct: 420 ALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKK 479
Query: 248 ----------------CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKV 291
C+ +VDEA+ +++ +GC V++++T+I +C++ +
Sbjct: 480 GFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAA 539
Query: 292 YELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYT 351
LLD+M P+VVTYTT++ L K G EEA ++ KM VG P + +I+
Sbjct: 540 LSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQ 599
Query: 352 LGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCK 411
R RV++ + + + + + +N +I G+ E+A+ +L ++ + K
Sbjct: 600 YCRMGRVEDLLKLLEKMLSRQEC---RTAYNQVIEKLCSFGNLEQAYKLLGKVLRTAS-K 655
Query: 412 PNVQTFHPLLKSCFKTG 428
+ T H L++S G
Sbjct: 656 IDANTCHMLIESYLSKG 672
>gi|255660866|gb|ACU25602.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
Length = 484
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 192/388 (49%), Gaps = 14/388 (3%)
Query: 100 HYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEE 159
H LV ++H K + AL FRW +EH+ E + +++ILG+ +++ R +L +
Sbjct: 12 HELVYNVLHSSKTS-EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLD 70
Query: 160 M-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
M KG + ++ + G +++V+ F ++ G+E+ ++ N L + + G+
Sbjct: 71 MPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGR 130
Query: 219 VELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
+A+ F + L I P HTFN+ I G+ +V+ A ++MK P V++Y+T
Sbjct: 131 YMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNT 190
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+I Y R + + EM+ + P VVTYTT++ ++A+R+ E+MK G
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFG 250
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP-DTSTFNTMITMFSHHGHHEK 396
KP++ ++ L+ L A ++ EA + + EM + +AP D S F +I+ G+ +
Sbjct: 251 IKPNTITYSTLLPGLCNAEKMSEARVILK-EMMDKYLAPTDNSIFMRLISSHCKSGNPDA 309
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK-------HHLSL 449
A VL+ M +L + L+ + K G+ D+ + +LLD ++ K L L
Sbjct: 310 AADVLKAMIRLS-VPTEAGHYGXLIXNFCKVGQYDKAV-KLLDKLIEKDIILRPQSTLHL 367
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEM 477
+ + Y +I LC + A L +++
Sbjct: 368 EPSAYNPMIEYLCNNGQAXKAETLVRQL 395
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 126/267 (47%), Gaps = 6/267 (2%)
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
+ ++++ A+ + +M G + +I SY ++ + ++ +M+ G +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIK 116
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
+Y + + + G + A R KM G +P FN +I+ + +V+ A ++ +
Sbjct: 117 SYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFE-D 175
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M ++PD T+NTMI + E+A EM K + +P V T+ L+K
Sbjct: 176 MKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEM-KGRNIEPTVVTYTTLIKGYVSVD 234
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ D+ L +L+++M + + TY+ ++ GLC A K A ++ KEM+ + P +
Sbjct: 235 QVDDAL-RLVEEM-KGFGIKPNTITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNS 292
Query: 489 C--RLILDEVKQKHMYDAAEKIEAVMK 513
RLI K + AA+ ++A+++
Sbjct: 293 IFMRLISSHCKSGNPDAAADVLKAMIR 319
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 5/205 (2%)
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N T+ ++ L ++ A I M G + D + +I + G+ VQE+V ++
Sbjct: 44 NRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMF 103
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
Q +M E GV ++N + + G + A +M E +P TF+ ++ F
Sbjct: 104 Q-KMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLS-EGIEPTRHTFNVMIWGFF 161
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
+GK E ++ +DM ++ +S D+ TY +I+G R K E A F EM G +I P
Sbjct: 162 LSGKV-ETANRFFEDMKSRE-ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPT 219
Query: 486 YQT-CRLILDEVKQKHMYDAAEKIE 509
T LI V + DA +E
Sbjct: 220 VVTYTTLIKGYVSVDQVDDALRLVE 244
>gi|255569207|ref|XP_002525572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535151|gb|EEF36831.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 687
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 111/449 (24%), Positives = 196/449 (43%), Gaps = 55/449 (12%)
Query: 70 IISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPG 129
++ G+ + E S+ D C + L LIH K L IF G C
Sbjct: 172 LVYDTGFGTKDLETVYSMLVD--CYVTESKVSLALNLIHEIK-----LLNIFPSMGVCNS 224
Query: 130 YEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAV 188
++ L + Q+D +LE M S G + + ++ + + G +
Sbjct: 225 ----------LLKALLRSHQLDLAWDILEGMQSFGMHLNASILSLFIESYCAEGNIQSGW 274
Query: 189 RTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC---------------- 232
+ E+ +G++ + +++D LCK V++A S+ ++ C
Sbjct: 275 KILMEMKNYGIKADVIAYTIVIDALCKISCVKVATSLLFKMIHCGISVDSVSVSSVIDGY 334
Query: 233 -----------------IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISY 275
+ PN ++ F+ CK + EA T QEM G +P Y
Sbjct: 335 CKKGRSDKAINLLNFFNVRPNIFVYSSFMTKLCKDGNMLEASKTFQEMSEFGLYPDCFCY 394
Query: 276 STIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKI 335
+ II YC+ + +K ++ L EM G P+V TYT +++ KSGD A + ++M +
Sbjct: 395 TIIIGGYCKVGDINKAFQYLGEMLKFGITPSVTTYTLLINACCKSGDMAMAEYLLQRMML 454
Query: 336 VGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHE 395
G PD FNCLI G+ +Q+A + + M G++PDT T+N +I G+
Sbjct: 455 EGLIPDVVTFNCLIDGFGKKGYLQKAFELLDI-MRSAGMSPDTVTYNALIHSLIARGYPN 513
Query: 396 KAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYT 455
+A +L E+ + P+V TF ++ K G +E L+ +++ H+ D+ T +
Sbjct: 514 EAKDILHELIR-RGLSPDVMTFTDVIDGFSKKGNFEEAF--LVWSYMSERHVKPDVVTCS 570
Query: 456 LVIHGLCRANKCEWAYLLFKEMIGHDITP 484
+++G CRA + + A LF +M+ + P
Sbjct: 571 ALLNGYCRARRMDEANALFLKMLDAGLKP 599
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 175/391 (44%), Gaps = 15/391 (3%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIV----TLNTIAKVMRRFSGAGQW 184
G + +Y M+VD ++ L+ E+ +I N++ K + R + Q
Sbjct: 179 GTKDLETVYSMLVDCYVTESKVSLALNLIHEIKLLNIFPSMGVCNSLLKALLR---SHQL 235
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIF 243
+ A + + +FG+ N ++L +++ C EG ++ + +E+K+ I + + I
Sbjct: 236 DLAWDILEGMQSFGMHLNASILSLFIESYCAEGNIQSGWKILMEMKNYGIKADVIAYTIV 295
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
I CKI+ V A + +M G +S S++I YC++ K LL+ +
Sbjct: 296 IDALCKISCVKVATSLLFKMIHCGISVDSVSVSSVIDGYCKKGRSDKAINLLNFFNVR-- 353
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
PN+ Y++ M+ L K G+ EA + ++M G PD + +I + + +A +
Sbjct: 354 -PNIFVYSSFMTKLCKDGNMLEASKTFQEMSEFGLYPDCFCYTIIIGGYCKVGDINKA-F 411
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
Y EM + G+ P +T+ +I G A ++L+ M LE P+V TF+ L+
Sbjct: 412 QYLGEMLKFGITPSVTTYTLLINACCKSGDMAMAEYLLQRM-MLEGLIPDVVTFNCLIDG 470
Query: 424 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
K G + L D++ +S D TY +IH L A + E+I ++
Sbjct: 471 FGKKGYLQKAFELL--DIMRSAGMSPDTVTYNALIHSLIARGYPNEAKDILHELIRRGLS 528
Query: 484 PRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
P T ++D +K ++ A + + M +
Sbjct: 529 PDVMTFTDVIDGFSKKGNFEEAFLVWSYMSE 559
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 174/401 (43%), Gaps = 25/401 (6%)
Query: 117 ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMR 176
AL FR + C G EH+ +R + ++ +L + + V ++ I ++R
Sbjct: 109 ALYFFRLSQCCSGLEHT-------------IRSLCRLIHILVYGKRNYRV-MDLILFLVR 154
Query: 177 RFSGAGQWEDAVRTFDEL---GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC- 232
GA E+ +L FG + ++L+D E KV LA ++ E+K
Sbjct: 155 NIGGAVGEEELCDLLFKLVYDTGFGTKDLETVYSMLVDCYVTESKVSLALNLIHEIKLLN 214
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
I P+ N + + +++D A ++ M+ G H S I+SYC + N +
Sbjct: 215 IFPSMGVCNSLLKALLRSHQLDLAWDILEGMQSFGMHLNASILSLFIESYCAEGNIQSGW 274
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
++L EM+ G +V+ YT V+ L K + A + KM G DS + +I
Sbjct: 275 KILMEMKNYGIKADVIAYTIVIDALCKISCVKVATSLLFKMIHCGISVDSVSVSSVIDGY 334
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
+ R +A+ + V P+ +++ +T G+ +A +EM++ P
Sbjct: 335 CKKGRSDKAINLLNFF----NVRPNIFVYSSFMTKLCKDGNMLEASKTFQEMSEF-GLYP 389
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
+ + ++ K G ++ Q L +M+ K ++ +TTYTL+I+ C++ A
Sbjct: 390 DCFCYTIIIGGYCKVGDINKAF-QYLGEML-KFGITPSVTTYTLLINACCKSGDMAMAEY 447
Query: 473 LFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
L + M+ + P T ++D +K A ++ +M+
Sbjct: 448 LLQRMMLEGLIPDVVTFNCLIDGFGKKGYLQKAFELLDIMR 488
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 114/246 (46%), Gaps = 3/246 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +++ KV +++ L EM K I ++ T ++ +G A +
Sbjct: 394 YTIIIGGYCKVGDINKAFQYLGEMLKFGITPSVTTYTLLINACCKSGDMAMAEYLLQRMM 453
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVD 254
GL + T N L+D K+G ++ A + ++S + P+ T+N IH +
Sbjct: 454 LEGLIPDVVTFNCLIDGFGKKGYLQKAFELLDIMRSAGMSPDTVTYNALIHSLIARGYPN 513
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA+ + E+ G P V++++ +I + ++ NF + + + M + P+VVT + ++
Sbjct: 514 EAKDILHELIRRGLSPDVMTFTDVIDGFSKKGNFEEAFLVWSYMSERHVKPDVVTCSALL 573
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
+ ++ +EA + KM G KPD +N LI+ A + A + + M ++G
Sbjct: 574 NGYCRARRMDEANALFLKMLDAGLKPDLVLYNNLIHGFCSAGNMNAACNLVAM-MIDDGF 632
Query: 375 APDTST 380
P+ +T
Sbjct: 633 LPNITT 638
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 76/176 (43%), Gaps = 2/176 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
+ ++D GK + + LL+ M S G T ++ G +A EL
Sbjct: 464 FNCLIDGFGKKGYLQKAFELLDIMRSAGMSPDTVTYNALIHSLIARGYPNEAKDILHELI 523
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVD 254
GL + T ++D K+G E A V+ + + P+ T + ++G+C+ R+D
Sbjct: 524 RRGLSPDVMTFTDVIDGFSKKGNFEEAFLVWSYMSERHVKPDVVTCSALLNGYCRARRMD 583
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
EA +M G P ++ Y+ +I +C N + L+ M G PN+ T+
Sbjct: 584 EANALFLKMLDAGLKPDLVLYNNLIHGFCSAGNMNAACNLVAMMIDDGFLPNITTH 639
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/393 (26%), Positives = 186/393 (47%), Gaps = 10/393 (2%)
Query: 125 GSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQ 183
G+C G + Y M++D L K + + EM G + + + +M G+
Sbjct: 1079 GNCKGDVFT---YGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGR 1135
Query: 184 WEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK-VELARSVFLELKSCIPPNAHTFNI 242
++A+ F E+ G+ + T N L+ L + G E+ + L + P+A TF I
Sbjct: 1136 LKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTI 1195
Query: 243 FIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
I G CK +V EAQ ++ M+ G P +++Y+T++ C +L + + +G
Sbjct: 1196 LIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRG 1255
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
NV +Y +++ K +EA R E+M+ G KP + +N LI L ++ RV+ A
Sbjct: 1256 IKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQ 1315
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLK 422
++ VEM G ST+ ++ +GH E+A + + + K EH KPN++ F LL
Sbjct: 1316 KLF-VEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEH-KPNIEVFSILLD 1373
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
+ GK +E Q D ++K+ L D Y ++I+GLC A L +M
Sbjct: 1374 GMCRAGKLEEAWKQF--DEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGC 1431
Query: 483 TPRYQTCRLILDE-VKQKHMYDAAEKIEAVMKK 514
P T +I+ +K+ +++A + +E + +
Sbjct: 1432 LPDSITFNVIIQNLLKENEIHEAIQLLEEMRNR 1464
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 165/348 (47%), Gaps = 42/348 (12%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
+Y ++D L + ++ + +EM +G + T ++ S AG W++ + +
Sbjct: 1122 VYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLM 1181
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL------------------------- 229
G + T +L+D LCKEGKV A+ + LEL
Sbjct: 1182 VDRGFSPDAFTFTILIDGLCKEGKVGEAQQI-LELMRHKGKEPDILTYNTLMNGLCLVGQ 1240
Query: 230 ------------KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
I N ++NI I+G+CK ++DEA +EM+ G P ++Y+T
Sbjct: 1241 LEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNT 1300
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+I + C+ +L EMQ G + TY ++ L K+G EEA+ + + +K
Sbjct: 1301 LIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTE 1360
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKA 397
KP+ F+ L+ + RA +++EA + E+ +NG+ PDT +N +I + G +A
Sbjct: 1361 HKPNIEVFSILLDGMCRAGKLEEAWKQFD-EISKNGLEPDTIAYNILINGLCNKGMLSEA 1419
Query: 398 FHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKH 445
+L +M + + C P+ TF+ ++++ K + E + QLL++M N++
Sbjct: 1420 VKLLWQMEE-KGCLPDSITFNVIIQNLLKENEIHEAI-QLLEEMRNRN 1465
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 163/349 (46%), Gaps = 8/349 (2%)
Query: 166 VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSV 225
VT+ T+ K + +G DAV+ FDE+ GL + +T +L++ LCK K LA +
Sbjct: 1017 VTVTTLVKGVWMENGI---PDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKL 1073
Query: 226 FLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQ 285
++K + T+ + I CK EA EM G G P V+ YS+++ CR
Sbjct: 1074 HEKMKGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRF 1133
Query: 286 YNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFF 345
+ E EM+ +G +V TY +++ L+++G ++E M G PD+ F
Sbjct: 1134 GRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTF 1193
Query: 346 NCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMN 405
LI L + +V EA + ++ M G PD T+NT++ G E A + E +
Sbjct: 1194 TILIDGLCKEGKVGEAQQILEL-MRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLA 1252
Query: 406 KLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRAN 465
K NV +++ L+ K K DE + ++M K L TY +I LC++
Sbjct: 1253 D-RGIKLNVFSYNILINGYCKDQKIDEAF-RFFEEMRPK-GLKPSTVTYNTLIGALCQSG 1309
Query: 466 KCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEAVMK 513
+ A LF EM + T ++LD + K H+ +A + +++ K
Sbjct: 1310 RVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKK 1358
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 159/373 (42%), Gaps = 29/373 (7%)
Query: 56 VLCVDSPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCN-----------------AIQP 98
LC D +D+ + G D V S D +C I
Sbjct: 1094 ALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISA 1153
Query: 99 SHYLVNKLIHRFKDD--WKSALGIFRWAGSCPGYEHSSEIYEMMVDIL---GKVRQMDQM 153
Y N LIH WK G+ + + +++D L GKV + Q+
Sbjct: 1154 DVYTYNSLIHGLSRAGLWKEVTWFLNLMVD-RGFSPDAFTFTILIDGLCKEGKVGEAQQI 1212
Query: 154 RALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDT 212
L+ K I+T NT+ M GQ EDA + F+ L G++ N + N+L++
Sbjct: 1213 LELMRHKGKEPDILTYNTL---MNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILING 1269
Query: 213 LCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPC 271
CK+ K++ A F E++ + P+ T+N I C+ RV AQ EM+ G
Sbjct: 1270 YCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLK 1329
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
+ +Y ++ C+ + + +L ++ PN+ ++ ++ + ++G EEA + +
Sbjct: 1330 LSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFD 1389
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHH 391
++ G +PD+ +N LI L + EAV + +M E G PD+ TFN +I
Sbjct: 1390 EISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLW-QMEEKGCLPDSITFNVIIQNLLKE 1448
Query: 392 GHHEKAFHVLEEM 404
+A +LEEM
Sbjct: 1449 NEIHEAIQLLEEM 1461
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 110/218 (50%), Gaps = 8/218 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++++ K +++D+ EEM K VT NT+ + + +G+ A + F
Sbjct: 1263 YNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQ---SGRVRTAQKLFV 1319
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCI-PPNAHTFNIFIHGWCKIN 251
E+ T G T +LLD LCK G +E A +F +K PN F+I + G C+
Sbjct: 1320 EMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAG 1379
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
+++EA E+ +G P I+Y+ +I C + S+ +LL +M+ +GC P+ +T+
Sbjct: 1380 KLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFN 1439
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
++ L K + EAI++ E+M+ PD + L+
Sbjct: 1440 VIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 1477
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 139/341 (40%), Gaps = 40/341 (11%)
Query: 177 RFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPP 235
RF G + DA++ FD T+T N LL ++ K G ++ ++ I P
Sbjct: 921 RF-GIIKLNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQP 979
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
+ +T NI IH C + V G P ++ +T+++ + +L
Sbjct: 980 DLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLF 1039
Query: 296 DEMQAQG----------------------------------CPPNVVTYTTVMSYLAKSG 321
DEM +G C +V TY ++ L K G
Sbjct: 1040 DEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTYGMIIDALCKDG 1099
Query: 322 DFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTF 381
EA+ + +M G PD ++ L+ L R R++EA+ ++ EM G++ D T+
Sbjct: 1100 MTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFK-EMEGRGISADVYTY 1158
Query: 382 NTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDM 441
N++I S G ++ L M P+ TF L+ K GK E Q+L+ M
Sbjct: 1159 NSLIHGLSRAGLWKEVTWFLNLMVD-RGFSPDAFTFTILIDGLCKEGKVGEA-QQILELM 1216
Query: 442 VNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
+K DI TY +++GLC + E A LF+ + I
Sbjct: 1217 RHKGK-EPDILTYNTLMNGLCLVGQLEDATKLFESLADRGI 1256
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 115/422 (27%), Positives = 196/422 (46%), Gaps = 40/422 (9%)
Query: 103 VNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEE--- 159
V+K++ ++D K AL F+WAGS G+ H++E Y ++V ++ + R ++E
Sbjct: 73 VSKILLGLREDPKLALKFFKWAGSQVGFRHTTESYCIIVHLVFRARMYTDAHDTVKEVIM 132
Query: 160 ---MSKGH-IVTLNTIAKVMRRF--SGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTL 213
M G + + + R SG+G ++ F ELG LE+ E +
Sbjct: 133 NSRMDMGFPVCNIFDMLWSTRNICVSGSGVFDVLFSVFVELGL--LEEANECFS------ 184
Query: 214 CKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI 273
++ R++ P A + N +H K + +M G G P V
Sbjct: 185 ----RMRNFRTL---------PKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVF 231
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
+Y+ +I C++ + L +M+ G P+VVTY +++ K G EE + +M
Sbjct: 232 TYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEM 291
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
K VG PD +N LI + ++ A + Y EM NG+ P+ T++T+I F G
Sbjct: 292 KDVGCVPDIITYNGLINCYCKFEKMPRA-FEYFSEMKNNGLKPNVVTYSTLIDAFCKEGM 350
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
+ A +L +M + PN T+ L+ + K G E +LL+DM+ + + L+I T
Sbjct: 351 MQGAIKLLXDMRR-TGLLPNEFTYTSLIDANCKAGNLTEAW-KLLNDML-QAGVKLNIVT 407
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
YT ++ GLC+A + A +F+ M+ I+P Q ++ H Y AE++E MK
Sbjct: 408 YTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALV------HGYIKAERMEDAMK 461
Query: 514 KL 515
L
Sbjct: 462 IL 463
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 177/389 (45%), Gaps = 6/389 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
G + + Y ++D K M LL +M + G + T ++ AG +A
Sbjct: 330 GLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEA 389
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHG 246
+ +++ G++ N T LLD LCK G++ A VF LK I PN + +HG
Sbjct: 390 WKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHG 449
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
+ K R+++A +++M P +I Y +II +C Q + +L+EM+++G N
Sbjct: 450 YIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISAN 509
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
V TT++ K+G +A+ ++M+ VG + + LI L A V+ AV Y
Sbjct: 510 PVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVD-YF 568
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
M G+ P+ + + ++I + E A + +EM + P++ F L+ K
Sbjct: 569 CRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEM-QCRGMTPDITAFTALIDGNLK 627
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
G E L +L + + + D+ YT ++ G + + A F EMI I P
Sbjct: 628 HGNLQEAL--VLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEE 685
Query: 487 QTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
C +L E ++ D A +++ M+++
Sbjct: 686 VLCICLLREYYKRGQLDEAIELKNEMERM 714
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 182/369 (49%), Gaps = 8/369 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
G H+ Y ++++ + Q+ ALL +M K G+ ++ T++ ++ + + DA
Sbjct: 115 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIH 245
V D++ G +T T L+ L K A ++ + + C PN T+ + ++
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGC-QPNLVTYGVVVN 233
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G CK +D A + +M+ V+ YST+I S C+ + L EM+ +G P
Sbjct: 234 GLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRP 293
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
NV+TY++++S L + +A R+ M P+ FN LI + ++ EA +Y
Sbjct: 294 NVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLY 353
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
EM + + PD T++++I F H ++A H+ E M + C PNV T++ L+
Sbjct: 354 D-EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS-KDCFPNVVTYNTLINGFC 411
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
K + DE + +L +M ++ L + TYT +IHG +A C+ A ++FK+M+ + P
Sbjct: 412 KAKRIDEGV-ELFREM-SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPN 469
Query: 486 YQTCRLILD 494
T +LD
Sbjct: 470 IMTYNTLLD 478
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 151/304 (49%), Gaps = 4/304 (1%)
Query: 131 EHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVR 189
E + IY ++D L K R D L EM +KG + T + ++ +W DA R
Sbjct: 257 EANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASR 316
Query: 190 TFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWC 248
++ + N T N L+D KEGK+ A ++ E+ K I P+ T++ I+G+C
Sbjct: 317 LLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 376
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
+R+DEA+ + M C P V++Y+T+I +C+ + EL EM +G N V
Sbjct: 377 MHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTV 436
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
TYTT++ ++ D + A + ++M G P+ +N L+ L + ++++A+ V++
Sbjct: 437 TYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEY- 495
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
+ + + P T+N MI G E + + ++ L+ KP+V ++ ++ + G
Sbjct: 496 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLS-LKGVKPDVIIYNTMISGFCRKG 554
Query: 429 KTDE 432
+E
Sbjct: 555 LKEE 558
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 138/289 (47%), Gaps = 9/289 (3%)
Query: 229 LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
+KS P+ FN + K+ + D ++M+ G + +Y+ +I +CR+
Sbjct: 77 VKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQI 136
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
S LL +M G P++VT +++++ +A+ + ++M +G +PD+ F L
Sbjct: 137 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 196
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
I+ L ++ EAV + M + G P+ T+ ++ G + AF++L NK+E
Sbjct: 197 IHGLFLHNKASEAVALVD-RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLL---NKME 252
Query: 409 HCK--PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANK 466
K NV + ++ S K D+ L+ L +M NK + ++ TY+ +I LC +
Sbjct: 253 AAKIEANVVIYSTVIDSLCKYRHEDDALN-LFTEMENK-GVRPNVITYSSLISCLCNYER 310
Query: 467 CEWAYLLFKEMIGHDITPRYQTCRLILDE-VKQKHMYDAAEKIEAVMKK 514
A L +MI I P T ++D VK+ + +A + + ++K+
Sbjct: 311 WSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR 359
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/423 (26%), Positives = 195/423 (46%), Gaps = 43/423 (10%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDA 187
G+E Y ++ L K ++ + ++EEM+ KG + T ++ R AG+ ++A
Sbjct: 5 GFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEA 64
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHG 246
F ++ G NT N L++ LCK+ +E A + E+ S P+ T+N + G
Sbjct: 65 DELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSG 124
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCV---------------------------------- 272
C++ +V EA+ M G P V
Sbjct: 125 LCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVA 184
Query: 273 ---ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI 329
I+Y+T+I +CR + +L ++ A+G P+ VTY +++ LA+ + +EA +
Sbjct: 185 PDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEM 244
Query: 330 TEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFS 389
+KM G P+ ++ ++ R + + +Y+ EM E +PD N +I M
Sbjct: 245 FKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYE-EMTEKRFSPDVLLCNAVIDMLC 303
Query: 390 HHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSL 449
+ A VLEEM+K+ P+V T++ LL KT D+ +L MV+ + +
Sbjct: 304 KAKKVDDAHKVLEEMSKIGAV-PDVVTYNILLDGLCKTNLVDKA-HELFSTMVD-NGCAP 360
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIE 509
DI +Y++V++GLC+ NK A +LF MI + P T +++D + + D A+ +
Sbjct: 361 DIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLL 420
Query: 510 AVM 512
VM
Sbjct: 421 DVM 423
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 173/355 (48%), Gaps = 9/355 (2%)
Query: 162 KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVEL 221
KG + T + ++ G+ +A+ +E+ G+ + T +++D LC+ GKV+
Sbjct: 4 KGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDE 63
Query: 222 ARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
A +F ++ + C N +N I+G CK ++ A ++EM G P I+Y+TI+
Sbjct: 64 ADELFHKMIERGC-SANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTIL 122
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
CR S+ + D M ++G P+VV Y ++ L K G EA + + M + K
Sbjct: 123 SGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRK 182
Query: 340 --PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKA 397
PD +N LI R + EA+ +++ ++ G PDT T+N+++ + + ++A
Sbjct: 183 VAPDLITYNTLIDGFCRVEKTDEAMKLFK-DVIAKGYMPDTVTYNSILLGLARKSNMDEA 241
Query: 398 FHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLV 457
+ ++M C PN T+ +L + G CL +L ++M K S D+ V
Sbjct: 242 EEMFKKMVD-SGCAPNGATYSIVLSGHCRVGNMARCL-ELYEEMTEK-RFSPDVLLCNAV 298
Query: 458 IHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
I LC+A K + A+ + +EM P T ++LD + + ++ D A ++ + M
Sbjct: 299 IDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTM 353
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 158/320 (49%), Gaps = 5/320 (1%)
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEA 256
G E + T + ++ LCK GKV A + E+ + + P+ T+ I + C+ +VDEA
Sbjct: 5 GFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEA 64
Query: 257 QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSY 316
+M GC ++Y+ +I C+ N + Y+LL+EM ++G P+ +TY T++S
Sbjct: 65 DELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSG 124
Query: 317 LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ-VEMPENGVA 375
L + G EA + + M G PD +N L+ L + +V EA +++ ++M + VA
Sbjct: 125 LCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVA 184
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS 435
PD T+NT+I F ++A + +++ + P+ T++ +L + DE
Sbjct: 185 PDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGY-MPDTVTYNSILLGLARKSNMDEA-E 242
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE 495
++ MV+ + + TY++V+ G CR L++EM +P C ++D
Sbjct: 243 EMFKKMVD-SGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDM 301
Query: 496 VKQKHMYDAAEKIEAVMKKL 515
+ + D A K+ M K+
Sbjct: 302 LCKAKKVDDAHKVLEEMSKI 321
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 181/383 (47%), Gaps = 10/383 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEE-MSKGHI---VTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++D +V + D+ L ++ ++KG++ VT N+I + R S ++A F
Sbjct: 190 YNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKS---NMDEAEEMFK 246
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKIN 251
++ G N T +++L C+ G + ++ E+ + P+ N I CK
Sbjct: 247 KMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAK 306
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
+VD+A ++EM G P V++Y+ ++ C+ K +EL M GC P++V+Y+
Sbjct: 307 KVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYS 366
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
V++ L K+ +A + ++M PD FN L+ L +A ++ EA + V M E
Sbjct: 367 VVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDV-MSE 425
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
+ V PD T T++ ++A + + M + + +V + +L + GK
Sbjct: 426 HNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVE-KGTVADVLPHNIVLAGLCREGKLA 484
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRL 491
+ L + + S D+ TYT +++ L A + + A F++M G P Y
Sbjct: 485 QALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNT 544
Query: 492 ILDEVKQKHMYDAAEKIEAVMKK 514
+++ ++++ + A+++ MK+
Sbjct: 545 LMNGLRKQGRHIQADRLTQAMKE 567
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 118/246 (47%), Gaps = 2/246 (0%)
Query: 263 MKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGD 322
M G P V++YSTII C+ ++ E+++EM +G P+V TYT ++ L ++G
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 323 FEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFN 382
+EA + KM G ++ +N LI L + ++ A Y EM G PD T+N
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERA-YKLLEEMASKGYEPDNITYN 119
Query: 383 TMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMV 442
T+++ G +A + M + P+V ++ LL + +K GK E +
Sbjct: 120 TILSGLCRMGKVSEAKQFFDSMPSRGY-SPDVVAYNGLLDALYKEGKVAEAWGLFKTMDM 178
Query: 443 NKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMY 502
++ D+ TY +I G CR K + A LFK++I P T IL + +K
Sbjct: 179 ADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNM 238
Query: 503 DAAEKI 508
D AE++
Sbjct: 239 DEAEEM 244
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 157/371 (42%), Gaps = 9/371 (2%)
Query: 96 IQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQM 153
+ P N LI F + A+ +F+ + GY + Y ++ L + MD+
Sbjct: 183 VAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIA-KGYMPDTVTYNSILLGLARKSNMDEA 241
Query: 154 RALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDT 212
+ ++M G T + V+ G + ++E+ + N ++D
Sbjct: 242 EEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDM 301
Query: 213 LCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPC 271
LCK KV+ A V E+ K P+ T+NI + G CK N VD+A M +GC P
Sbjct: 302 LCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPD 361
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
++SYS ++ C+ L D M + P+VVT+ +M L K+G +EA + +
Sbjct: 362 IVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLD 421
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHH 391
M PD L++ L R R EAV ++Q M E G D N ++
Sbjct: 422 VMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQY-MVEKGTVADVLPHNIVLAGLCRE 480
Query: 392 GHHEKAFHVLEEMNKLE-HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLD 450
G +A + M K + P+V T+ L+ + + G+ D+ + + + D
Sbjct: 481 GKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYF--QQMTGSGCAPD 538
Query: 451 ITTYTLVIHGL 461
Y +++GL
Sbjct: 539 YVAYNTLMNGL 549
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 98/245 (40%), Gaps = 41/245 (16%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +++D L K +D+ L M G + + + V+ + DA FD +
Sbjct: 330 YNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMI 389
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS--CIPPNAHTFNIFIHGWCKINRV 253
L + T N+L+D LCK GK++ A+ L++ S + P+ T +HG C+ R
Sbjct: 390 ERKLVPDVVTFNILMDGLCKAGKLDEAKD-LLDVMSEHNVLPDGVTCTTLMHGLCRDKRT 448
Query: 254 DEAQWTIQEMKGHGC-------------------------------------HPCVISYS 276
DEA Q M G P V++Y+
Sbjct: 449 DEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYT 508
Query: 277 TIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIV 336
T++ + + + +M GC P+ V Y T+M+ L K G +A R+T+ MK
Sbjct: 509 TLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEK 568
Query: 337 GSKPD 341
G D
Sbjct: 569 GFLSD 573
>gi|255660904|gb|ACU25621.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 484
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 195/389 (50%), Gaps = 14/389 (3%)
Query: 100 HYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEE 159
H LV ++H K + AL FRW +EH+ E + +++ILG+ +++ R +L +
Sbjct: 12 HELVYNVLHSAKTS-EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLD 70
Query: 160 M-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
M KG + ++ + G +++V+ F ++ G+E+ ++ N L + + G+
Sbjct: 71 MPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKAILRRGR 130
Query: 219 VELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
+A+ F + L I P HTFN+ I G+ +V+ A ++MK P V++Y+T
Sbjct: 131 YMMAKRYFNKMLSEGIEPARHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNT 190
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+I Y R + + EM+ + P VVTYTT++ ++A+R+ E+MK G
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFG 250
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP-DTSTFNTMITMFSHHGHHEK 396
KP++ ++ L+ L A ++ EA + + EM + +AP D S F +I+ + G+ +
Sbjct: 251 IKPNAITYSTLLPGLCNAGKMIEARSILK-EMMDKYLAPTDNSIFMRLISSQCNSGNLDA 309
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK-------HHLSL 449
A VL+ M +L + L+++ K G+ D+ + +LLD ++ K L L
Sbjct: 310 AADVLKAMIRLS-VPTEAGHYGVLIENFCKAGQYDQAV-KLLDKLIEKDIILRPQSTLHL 367
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMI 478
+ + Y +I LC + A L ++++
Sbjct: 368 EPSAYNPMIEYLCNNGQAAKAEALVRQLL 396
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 126/267 (47%), Gaps = 6/267 (2%)
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
+ ++++ A+ + +M G + +I SY ++ + ++ +M+ G +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIK 116
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
+Y + + + G + A R KM G +P FN +I+ + +V+ A ++ +
Sbjct: 117 SYNALFKAILRRGRYMMAKRYFNKMLSEGIEPARHTFNVMIWGFFLSGKVETANRFFE-D 175
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M ++PD T+NTMI + E+A EM K + +P V T+ L+K
Sbjct: 176 MKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEM-KGRNIEPTVVTYTTLIKGYVSVD 234
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ D+ L +L+++M + + TY+ ++ GLC A K A + KEM+ + P +
Sbjct: 235 QVDDAL-RLVEEM-KGFGIKPNAITYSTLLPGLCNAGKMIEARSILKEMMDKYLAPTDNS 292
Query: 489 C--RLILDEVKQKHMYDAAEKIEAVMK 513
RLI + ++ AA+ ++A+++
Sbjct: 293 IFMRLISSQCNSGNLDAAADVLKAMIR 319
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 5/205 (2%)
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N T+ ++ L ++ A I M G + D + +I + G+ VQE+V ++
Sbjct: 44 NRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMF 103
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
Q +M E GV ++N + G + A +M E +P TF+ ++ F
Sbjct: 104 Q-KMEELGVERTIKSYNALFKAILRRGRYMMAKRYFNKMLS-EGIEPARHTFNVMIWGFF 161
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
+GK E ++ +DM ++ +S D+ TY +I+G R K E A F EM G +I P
Sbjct: 162 LSGKV-ETANRFFEDMKSRE-ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPT 219
Query: 486 YQT-CRLILDEVKQKHMYDAAEKIE 509
T LI V + DA +E
Sbjct: 220 VVTYTTLIKGYVSVDQVDDALRLVE 244
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 79/213 (37%), Gaps = 28/213 (13%)
Query: 131 EHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFS----------- 179
E S + EMM L MR + + + G++ + K M R S
Sbjct: 273 EARSILKEMMDKYLAPTDNSIFMRLISSQCNSGNLDAAADVLKAMIRLSVPTEAGHYGVL 332
Query: 180 -----GAGQWEDAVRTFDEL----------GTFGLEKNTETMNLLLDTLCKEGKVELARS 224
AGQ++ AV+ D+L T LE + N +++ LC G+ A +
Sbjct: 333 IENFCKAGQYDQAVKLLDKLIEKDIILRPQSTLHLEPSA--YNPMIEYLCNNGQAAKAEA 390
Query: 225 VFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCR 284
+ +L + N I G + D A ++ M +Y +++QSY +
Sbjct: 391 LVRQLLKLGVQDPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYDSLVQSYLK 450
Query: 285 QYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
+ + LD M P+ + +VM L
Sbjct: 451 KNEPADAKAALDSMIENDHLPDSSLFRSVMESL 483
>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 721
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 179/380 (47%), Gaps = 6/380 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +++D + +MD L++M+K I T+ ++ + G A FDE+
Sbjct: 230 YSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMI 289
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVD 254
GL T L+ C EG+ A V+ E+ + I PN +TF I G C+ N +
Sbjct: 290 DKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMA 349
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA EMK P ++Y+ +I+ +CR N S+ + LLDEM +G P+ TY ++
Sbjct: 350 EAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLI 409
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
S L G EA + + K ++ ++ L++ + R ++AV +V M E GV
Sbjct: 410 SGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRV-MVERGV 468
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
A D + +I + F +L+EM+ +P+ + ++ K G E
Sbjct: 469 AMDLVCYAILIDGTAREHDTRALFGLLKEMHN-HGLRPDAVIYTNMIDRHSKAGNLKEAF 527
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
L D MV++ L ++ TYT +I+GLC+A + A LL KE + D+TP + T LD
Sbjct: 528 G-LWDIMVDEGCLP-NVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLD 585
Query: 495 EVKQKHMYDAAEKIEAVMKK 514
+ + + A ++ M K
Sbjct: 586 HLTRGGNMEKAVQLHHAMLK 605
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 197/407 (48%), Gaps = 28/407 (6%)
Query: 87 LKQDHVCNAIQPSHYLVNKLIHRFKD--DWKSALGIFRWA--GSCPGYEHSSEIYEMMVD 142
L D V +QP Y+ + ++ + D+ A + W C + S +Y +++
Sbjct: 118 LFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAKEMIHWMEFNQC---KLSIVVYNVLIH 174
Query: 143 ILGKVRQ----MDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
L K R+ ++ L+++ + ++VT G++ +A F E+G G
Sbjct: 175 GLCKSRRIWEALEIKNCLMQKGLEANVVTY------------YGKFNEAELLFKEMGEKG 222
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQ 257
L N T ++L+D+ C+ G+++ A ++ K+ I + +N I+G+CK+ A+
Sbjct: 223 LCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAK 282
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
+ EM G P V++Y+++I YC + + K +++ +EM A+G PN T+T ++S L
Sbjct: 283 YYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGL 342
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
++ EAIR+ +MK P +N +I R+ + EA ++ EM G PD
Sbjct: 343 CRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLD-EMVGKGFVPD 401
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
T T+ +I+ G +A +++++K +H K N + L+ K G+ + +S
Sbjct: 402 TYTYRPLISGLCSVGRVSEAKEFVDDLHK-DHHKLNNMCYSALVHGYCKEGRFKDAVSAC 460
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
++ + +++D+ Y ++I G R + + L KEM H + P
Sbjct: 461 --RVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRP 505
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 110/503 (21%), Positives = 203/503 (40%), Gaps = 58/503 (11%)
Query: 33 SHIVSSSPIESYCSDG------ARLDHHQVLCVDSPRLPDIDVIISKVHVGSSEDEVFQS 86
+HI S I+S+C G LD ++ P +I +G++ +
Sbjct: 226 NHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYF 285
Query: 87 LKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDIL 144
+ + + P+ LI + + +W A ++ + G ++ + ++ L
Sbjct: 286 --DEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEM-TAKGISPNTYTFTAIISGL 342
Query: 145 GKVRQMDQMRALLEEMSKGHIVTLNTIAKVM-RRFSGAGQWEDAVRTFDELGTFGLEKNT 203
+ M + L EM + I+ VM +G +A DE+ G +T
Sbjct: 343 CRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDT 402
Query: 204 ETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWT--- 259
T L+ LC G+V A+ +L K N ++ +HG+CK R +A
Sbjct: 403 YTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRV 462
Query: 260 --------------------------------IQEMKGHGCHPCVISYSTIIQSYCRQYN 287
++EM HG P + Y+ +I + + N
Sbjct: 463 MVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGN 522
Query: 288 FSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNC 347
+ + L D M +GC PNVVTYT +++ L K+G ++A ++++ + P+ + C
Sbjct: 523 LKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGC 582
Query: 348 LIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKL 407
+ L R +++AV ++ + G T ++N +I F G E+A +L M
Sbjct: 583 FLDHLTRGGNMEKAVQLHHAML--KGFLATTVSYNILIRGFCRLGKIEEATKLLHGMTD- 639
Query: 408 EHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKC 467
P+ T+ ++ K E + +L M++K L D Y+ ++HG C A +
Sbjct: 640 NDILPDYITYSTIIYEQCKRSNLQEAI-KLWHTMLDK-GLKPDTLAYSFLVHGCCIAGEL 697
Query: 468 EWAYLLFKEMI-----GHDITPR 485
E A+ L EMI + +TP+
Sbjct: 698 EKAFELRDEMIRRGMRSNHVTPK 720
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 130/289 (44%), Gaps = 18/289 (6%)
Query: 229 LKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYN 287
+K C + P T + ++G + R ++ ++ P + YS +++S C +
Sbjct: 87 MKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKD 146
Query: 288 FSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNC 347
F+K E++ M+ C ++V Y ++ L KS EA+ I + G + N
Sbjct: 147 FNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEA-----NV 201
Query: 348 LIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKL 407
+ Y + EA +++ EM E G+ + T++ +I F G + A L++M K
Sbjct: 202 VTYY----GKFNEAELLFK-EMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTK- 255
Query: 408 EHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKC 467
+ V ++ L+ K G D+M++K L+ + TYT +I G C N+
Sbjct: 256 ASIEFTVYPYNSLINGYCKLGNASAA-KYYFDEMIDK-GLTPTVVTYTSLISGYC--NEG 311
Query: 468 EW--AYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
EW A+ ++ EM I+P T I+ + + +M A ++ MK+
Sbjct: 312 EWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKE 360
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/483 (23%), Positives = 205/483 (42%), Gaps = 69/483 (14%)
Query: 61 SPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRF-----KDDWK 115
+P + ++++ + +E + D P+ N L+ F D +
Sbjct: 151 APNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAE 210
Query: 116 SALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-------------- 161
+G+ R G P S + +V+ L K +M+ R + +EM+
Sbjct: 211 RLVGVMREGGVRP----SLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTL 266
Query: 162 ----------------------KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGL 199
KG + + T ++ AG E AV ++ GL
Sbjct: 267 VSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGL 326
Query: 200 EKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQW 258
N T L+D C+ G ++ A E++ C I P+ +N+ I+G+CK+ R+DEA+
Sbjct: 327 RMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARE 386
Query: 259 TIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLA 318
I EM+ G P V++YSTI+ YC+ + +EL +M +G P+ +TY++++ L
Sbjct: 387 LIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLC 446
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDT 378
+ +A + EKM +G +PD + LI + VQ+A+ ++ EM + GV PD
Sbjct: 447 EERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHD-EMIKKGVLPDV 505
Query: 379 STFNTMITMFSHHGHHEKAFHVLEEM------------NKLEHC--KPNVQTFHPLLKSC 424
T++ +I S ++A +L ++ L HC ++ LLK
Sbjct: 506 VTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGF 565
Query: 425 FKTG---KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHD 481
G + D+ +LD H LD + Y+++IHG CR A K+++
Sbjct: 566 SMKGLMNQADKVYQSMLD-----RHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCG 620
Query: 482 ITP 484
+P
Sbjct: 621 FSP 623
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 105/385 (27%), Positives = 177/385 (45%), Gaps = 55/385 (14%)
Query: 94 NAIQPSHYLVNKLIHRF--KDDWKSALGI----FRWAGSCPGYEHSSEIYEMMVDILGKV 147
+ + P+ Y N L+ + + ALG+ R AG P + Y +V +
Sbjct: 148 DGVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAP----NVVTYNTLVAAFCRA 203
Query: 148 RQMDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNT 203
++D L+ M +G + VT NT+ + + AG+ EDA + FDE+ GL +
Sbjct: 204 GEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCK---AGRMEDARKMFDEMAREGLTPDG 260
Query: 204 ETMNLLLDTLCKEGKVELARSVFLEL--KSCIPP-------------------------- 235
+ N L+ CK G + A +VF E+ K +P
Sbjct: 261 VSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQ 320
Query: 236 --------NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYN 287
N TF I G+C+ +D+A ++EM+ P V+ Y+ +I YC+
Sbjct: 321 MRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGR 380
Query: 288 FSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNC 347
+ EL+ EM+A+G P+VVTY+T++S K GD + A + KM G PD+ ++
Sbjct: 381 MDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSS 440
Query: 348 LIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKL 407
LI L R+ +A +++ +M + G+ PD T+ T+I G+ +KA + +EM K
Sbjct: 441 LIRGLCEERRLGDACELFE-KMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIK- 498
Query: 408 EHCKPNVQTFHPLLKSCFKTGKTDE 432
+ P+V T+ L+ K+ +T E
Sbjct: 499 KGVLPDVVTYSVLIDGLSKSARTKE 523
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 159/320 (49%), Gaps = 9/320 (2%)
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVF---LELKSCIPPNAHTFNIFIHGWCKINRVD 254
G+ N T N+L+ LC G+ E A V + C PN T+N + +C+ VD
Sbjct: 149 GVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGC-APNVVTYNTLVAAFCRAGEVD 207
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
A+ + M+ G P +++++T++ C+ ++ DEM +G P+ V+Y T++
Sbjct: 208 AAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLV 267
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
S K+G EA+ + +M G PD F LI+ + RA ++ AV + +M E G+
Sbjct: 268 SGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVG-QMRERGL 326
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
+ TF +I F +G + A ++EM + +P+V ++ L+ K G+ DE
Sbjct: 327 RMNEFTFTALIDGFCRNGFLDDALLAMKEMREC-RIQPSVVCYNVLINGYCKLGRMDEA- 384
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT-CRLIL 493
+L+ +M K + D+ TY+ ++ G C+ + A+ L ++M+ + P T LI
Sbjct: 385 RELIHEMEAK-GMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIR 443
Query: 494 DEVKQKHMYDAAEKIEAVMK 513
+++ + DA E E +++
Sbjct: 444 GLCEERRLGDACELFEKMLQ 463
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 186/379 (49%), Gaps = 15/379 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKG-----HIVTLNTIAKVMRRFSGAGQWEDAVRTF 191
Y ++V L Q ++ ++ + +G ++VT NT+ F AG+ + A R
Sbjct: 157 YNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAA---FCRAGEVDAAERLV 213
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKI 250
+ G+ + T N +++ LCK G++E AR +F E+ + + P+ ++N + G+CK
Sbjct: 214 GVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKA 273
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
+ EA EM G P V++++++I + CR N + L+ +M+ +G N T+
Sbjct: 274 GCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTF 333
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
T ++ ++G ++A+ ++M+ +P +N LI + R+ EA + EM
Sbjct: 334 TALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIH-EME 392
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS-CFKTGK 429
G+ PD T++T+++ + G + AF + +M K + P+ T+ L++ C +
Sbjct: 393 AKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLK-KGVVPDAITYSSLIRGLCEERRL 451
Query: 430 TDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTC 489
D C +L + M+ + L D TYT +I G C+ + A L EMI + P T
Sbjct: 452 GDAC--ELFEKML-QLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTY 508
Query: 490 RLILDEVKQKHMYDAAEKI 508
+++D + + A+++
Sbjct: 509 SVLIDGLSKSARTKEAQRL 527
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 99/212 (46%), Gaps = 6/212 (2%)
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
G P +++Y+ ++ + + LL M G PNV TY ++ L G EEA
Sbjct: 115 GYAPSLLAYNAVLLAL-SDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173
Query: 327 IRIT-EKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMI 385
+ + + M+ G P+ +N L+ RA V A + V M E GV P TFNT++
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGV-MREGGVRPSLVTFNTVV 232
Query: 386 TMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKH 445
G E A + +EM + E P+ +++ L+ K G E L+ + +M K
Sbjct: 233 NGLCKAGRMEDARKMFDEMAR-EGLTPDGVSYNTLVSGYCKAGCLHEALA-VFAEMAQKG 290
Query: 446 HLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
+ D+ T+T +IH +CRA E A L +M
Sbjct: 291 VVP-DVVTFTSLIHAMCRAGNLERAVALVGQM 321
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 88/187 (47%), Gaps = 4/187 (2%)
Query: 302 GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
G P+++ Y V+ L+ + A R+ M G P+ +N L+ L + +EA
Sbjct: 115 GYAPSLLAYNAVLLALSDA-SLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173
Query: 362 VYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLL 421
+ V +M G AP+ T+NT++ F G + A ++ M + +P++ TF+ ++
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMRE-GGVRPSLVTFNTVV 232
Query: 422 KSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHD 481
K G+ ++ ++ D+M + L+ D +Y ++ G C+A A +F EM
Sbjct: 233 NGLCKAGRMEDA-RKMFDEMA-REGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKG 290
Query: 482 ITPRYQT 488
+ P T
Sbjct: 291 VVPDVVT 297
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/414 (26%), Positives = 186/414 (44%), Gaps = 46/414 (11%)
Query: 131 EHSSEIYEMMVDILGKVRQMDQMRALLEEMSK----GHIVTLNTIAKVMRRFSGAGQWED 186
E ++ +MV K + D ++ EM K +VT N + R AG +
Sbjct: 154 EVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFR---AGDVDA 210
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIH 245
A+ D + GL+ T N +L LCK + + A+ VF + C + P+ +FNI I
Sbjct: 211 AIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIG 270
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G+C++ V EA +EM+ P V+S+S +I + R+ L EM+ G P
Sbjct: 271 GFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVP 330
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
+ V YT V+ ++G EA+R+ ++M G PD +N L+ L + R+ +A +
Sbjct: 331 DGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLL 390
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
EM E GV PD TF T+I + G+ E A + + + + + +P+V T++ L+
Sbjct: 391 N-EMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLR-QRLRPDVVTYNSLIDGMC 448
Query: 426 KTG---KTDECLSQL-------------------------------LDDMVNKHHLSLDI 451
+ G K +E + LD+MV K +L +I
Sbjct: 449 RKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLP-NI 507
Query: 452 TTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCR-LILDEVKQKHMYDA 504
TY +I G CR+ + ++M ++ P T LI +K+++M+ A
Sbjct: 508 RTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGA 561
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 166/350 (47%), Gaps = 6/350 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTI-AKVMRRFSGAGQWEDAVRTFDELG 195
+ ++ + + +MD A L EM +V I V+ F AG +A+R DE+
Sbjct: 300 FSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMV 359
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVD 254
FG + T N LL+ LCK+ ++ A + E++ + P+ TF IHG+C+ +
Sbjct: 360 GFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFE 419
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
A + P V++Y+++I CR+ + +K EL D+M A+ PN +TY+ ++
Sbjct: 420 NALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILI 479
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
+ G E+A ++M G+ P+ R +N +I R+ V++ Q +M ++ V
Sbjct: 480 DSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQ-KMRQDNV 538
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
PD TFNT+I + + AF+V M K E +P+ T++ ++ + G +
Sbjct: 539 FPDLITFNTLIHGYIKEENMHGAFNVFNIMEK-EMVRPDAVTYNMIINGFSEQGNMQDA- 596
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
++ M + D TY +I+G A + A+ L EMI P
Sbjct: 597 GRVFKGM-GDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAP 645
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 148/310 (47%), Gaps = 6/310 (1%)
Query: 207 NLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKG 265
N LL L + G LA+ + L L S NA+T NI +H +CK D A I EM+
Sbjct: 126 NALLAVLSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEK 185
Query: 266 HGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEE 325
P V++++ +I + R + L+D M +G P +VTY +V+ L K F++
Sbjct: 186 RCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDK 245
Query: 326 AIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMI 385
A + M PD R FN LI R V+EAV Y+ EM V PD +F+ +I
Sbjct: 246 AKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYK-EMQHRYVTPDVVSFSCLI 304
Query: 386 TMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKH 445
+FS G + A L EM L P+ + ++ + G E L ++ D+MV
Sbjct: 305 GLFSRRGEMDHAGAYLREMKGL-GLVPDGVIYTMVIGGFCRAGSMSEAL-RVRDEMVGFG 362
Query: 446 HLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT-CRLILDEVKQKHMYDA 504
L D+ TY +++GLC+ ++ A L EM +TP T LI +Q + +A
Sbjct: 363 CLP-DVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENA 421
Query: 505 AEKIEAVMKK 514
+ + ++++
Sbjct: 422 LQLFDTLLRQ 431
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/378 (23%), Positives = 188/378 (49%), Gaps = 7/378 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVT-LNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ L K R+ D+ + + M + + + + ++ F G+ ++AV+ + E+
Sbjct: 230 YNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQ 289
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVD 254
+ + + + L+ + G+++ A + E+K + P+ + + I G+C+ +
Sbjct: 290 HRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMS 349
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA EM G GC P V++Y+T++ C+Q+ +LL+EM+ +G P++ T+TT++
Sbjct: 350 EALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLI 409
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
+ G+FE A+++ + + +PD +N LI + R + +A ++ +M +
Sbjct: 410 HGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWD-DMHAREI 468
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
P+ T++ +I G E AF L+EM K + PN++T++ ++K ++G +
Sbjct: 469 LPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNL-PNIRTYNSIIKGYCRSGNVKKG- 526
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
Q L M + ++ D+ T+ +IHG + A+ +F M + P T +I++
Sbjct: 527 QQFLQKM-RQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIIN 585
Query: 495 EV-KQKHMYDAAEKIEAV 511
+Q +M DA + +
Sbjct: 586 GFSEQGNMQDAGRVFKGM 603
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 113/223 (50%), Gaps = 5/223 (2%)
Query: 156 LLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK 215
LL + + +VT N++ M R G A +D++ + N T ++L+D+ C+
Sbjct: 428 LLRQRLRPDVVTYNSLIDGMCR---KGDLAKANELWDDMHAREILPNHITYSILIDSHCE 484
Query: 216 EGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVIS 274
+G+VE A E+ K PN T+N I G+C+ V + Q +Q+M+ P +I+
Sbjct: 485 KGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLIT 544
Query: 275 YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
++T+I Y ++ N + + + M+ + P+ VTY +++ ++ G+ ++A R+ + M
Sbjct: 545 FNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMG 604
Query: 335 IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
G +PD + LI A ++A ++ EM G APD
Sbjct: 605 DSGIEPDRYTYMSLINGHVTAGNSKQAFQLHD-EMIHRGFAPD 646
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 1/164 (0%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTF 240
GQ EDA DE+ G N T N ++ C+ G V+ + +++ + P+ TF
Sbjct: 486 GQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITF 545
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
N IHG+ K + A M+ P ++Y+ II + Q N + M
Sbjct: 546 NTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGD 605
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRF 344
G P+ TY ++++ +G+ ++A ++ ++M G PD +F
Sbjct: 606 SGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPDDKF 649
>gi|242063152|ref|XP_002452865.1| hypothetical protein SORBIDRAFT_04g033840 [Sorghum bicolor]
gi|241932696|gb|EES05841.1| hypothetical protein SORBIDRAFT_04g033840 [Sorghum bicolor]
Length = 551
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/404 (27%), Positives = 182/404 (45%), Gaps = 31/404 (7%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILG----KVRQMDQMRALL 157
LV ++HR + + K A F WA GY H S Y ++DIL K RQ + +L
Sbjct: 110 LVADVLHRLRYEEKLAFRFFAWASHQDGYSHESATYNDIIDILSGTRYKSRQFGVLCNVL 169
Query: 158 EEMSK--GHIVTLNTIAKVMRRFSG---------AGQWEDAVRTFDELGTFGLEKNTETM 206
+ M + V + + +++R ++ A + +RT E T+ +
Sbjct: 170 DHMKRHGTRSVPVEDLLEILRAYTEKHLTHMRKLAKKRRVRLRTPPE---------TDAL 220
Query: 207 NLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
N+LLD CK G V+ A +VF +K + NA T++I GWC+ +A ++EM
Sbjct: 221 NVLLDAFCKCGMVKEAEAVFGRVKRRLLGNAETYSILFFGWCRARDPKKAMKVLEEMIQM 280
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG---CPPNVVTYTTVMSYLAKSGDF 323
P +Y I+S+C S+ EL + M+ +G P TY+ ++ LAK+
Sbjct: 281 KHTPESFTYIAAIESFCSAGLVSEARELFEFMRTEGSTISSPTAKTYSIMIVALAKADRM 340
Query: 324 EEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNT 383
EE + M+ G PD + LI + ++ A V + EM G PD T+N
Sbjct: 341 EECFELLSDMRSCGCMPDVSTYKELIEGMCLVGKLDAAYRVLE-EMGRAGFPPDIVTYNC 399
Query: 384 MITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVN 443
+ + + A + E M + HC+P+V T++ L+ F+ G+ L L+ ++
Sbjct: 400 FLNVLCSLRKADDALELCERMIE-AHCEPSVHTYNMLMVMFFEMGEAHRALDIWLE--MD 456
Query: 444 KHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
I TY ++I GL K E A L E+I D+ Y+
Sbjct: 457 TRGCQRAIDTYEIMIDGLFDCGKTEHATSLLDEVINRDMKLSYK 500
>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 118/461 (25%), Positives = 209/461 (45%), Gaps = 85/461 (18%)
Query: 131 EHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIV----TLNTI-AKVMRRFSGAGQWE 185
E S + ++ L K R++++ R +L E+ V T + I +++ GAG
Sbjct: 168 EPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAAL 227
Query: 186 DAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFI 244
D R + +G G++ + T ++LL+ LCKEGKVE A V L + + P +N +
Sbjct: 228 DLYR--EAIGK-GVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIV 284
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQ------------------- 285
+G+C+I +D A TI++M+ G P I+++++I +C
Sbjct: 285 NGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIA 344
Query: 286 -----YN-----------FSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI 329
YN FS+ +++L+EM+ G PNV++Y ++++ L K G EA +
Sbjct: 345 PSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMV 404
Query: 330 TEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA-------------- 375
M G P++ +N LI +++EA+ + EM +NG+
Sbjct: 405 LRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFD-EMSKNGIGATIVTYNSLIKGLC 463
Query: 376 ---------------------PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNV 414
PD T+N++I+ +S+ G+ +K + E M KL KP +
Sbjct: 464 KMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKL-GLKPTI 522
Query: 415 QTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLF 474
TFHPL+ C K G L + L + + + +LS D Y +IH + A+ L
Sbjct: 523 NTFHPLISGCSKEGIK---LKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQ 579
Query: 475 KEMIGHDITPRYQTCR-LILDEVKQKHMYDAAEKIEAVMKK 514
KEM+ + P +T LIL +K+ + + + ++ + K
Sbjct: 580 KEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAK 620
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 164/317 (51%), Gaps = 13/317 (4%)
Query: 199 LEKNTETMNL-----LLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINR 252
+E+N E N+ L++ LCK+GK+ A V ++ + PNA+ +N+ I G C + +
Sbjct: 373 MEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGK 432
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
+ EA EM +G +++Y+++I+ C+ + E+ + + G P+V+TY +
Sbjct: 433 LREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNS 492
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRAS-RVQEAVYVYQVEMPE 371
++S + +G+ ++ + + E MK +G KP F+ LI + +++E ++ EM +
Sbjct: 493 LISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLKETLFN---EMLQ 549
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
++PD +N MI + GH +KAF + +EM + +P+ +T++ L+ K GK
Sbjct: 550 MNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDM-GVRPDNKTYNSLILGHLKEGKLS 608
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRL 491
E L+DDM K + + TY+L+I G C AY+ ++EM+ + P C
Sbjct: 609 ET-KDLVDDMKAKGLIP-EADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNE 666
Query: 492 ILDEVKQKHMYDAAEKI 508
+ +++ A+ I
Sbjct: 667 LSTGLRKDGRLQEAQSI 683
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/359 (20%), Positives = 155/359 (43%), Gaps = 7/359 (1%)
Query: 139 MMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTF 197
M++ + + + Q+ L + M + G + + + ++ + ++++ + F E+
Sbjct: 1 MLLSVCSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGL 60
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEA 256
G + + K G ++LA +F +K + PN +N+ I G CK R+ +A
Sbjct: 61 GFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDA 120
Query: 257 QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSY 316
+ EM P ++++T+I YC+ L + M+ + P+++T+ +++S
Sbjct: 121 EKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSG 180
Query: 317 LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
L K+ EEA + ++K G PD ++ + L ++ A E GV
Sbjct: 181 LCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKI 240
Query: 377 DTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH-CKPNVQTFHPLLKSCFKTGKTDECLS 435
D T + ++ G EKA VL+ + +EH P ++ ++ + G D +
Sbjct: 241 DNYTCSILLNGLCKEGKVEKAEEVLKSL--VEHGLVPGEVIYNTIVNGYCQIGDMDRAI- 297
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
L + + L + + VI C + A K+M+G I P +T +++D
Sbjct: 298 -LTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILID 355
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 137/323 (42%), Gaps = 10/323 (3%)
Query: 186 DAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFI 244
D +R L +FG + +++++L + K + +F E+ P+ + +
Sbjct: 20 DFMRQEGRLPSFGY------VRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAM 73
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
K+ + A + MK P V Y+ +I C++ +L EM +
Sbjct: 74 LAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLV 133
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
PN VT+ T++ K+G+ + AI + E+MK +P FN L+ L +A R++EA +
Sbjct: 134 PNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCM 193
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
E+ NG PD T++ + A L + K + T LL
Sbjct: 194 LN-EIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGL 252
Query: 425 FKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
K GK ++ ++L +V +H L Y +++G C+ + A L ++M + P
Sbjct: 253 CKEGKVEKA-EEVLKSLV-EHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRP 310
Query: 485 RYQTCRLILDEVKQKHMYDAAEK 507
++D+ + M D AE+
Sbjct: 311 NCIAFNSVIDKFCEMQMIDKAEE 333
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/388 (21%), Positives = 151/388 (38%), Gaps = 85/388 (21%)
Query: 95 AIQPSHYLVNKLIHRF--------KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGK 146
++P+ N +I +F ++W + + G G S E Y +++D G+
Sbjct: 307 GLRPNCIAFNSVIDKFCEMQMIDKAEEW-----VKKMVGK--GIAPSVETYNILIDGYGR 359
Query: 147 VRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTET 205
+ + +LEEM + G + + ++ G+ +A ++ G+ N
Sbjct: 360 LCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANI 419
Query: 206 MNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
N+L+D C GK+ A F E+ K+ I T+N I G CK+ ++ EA+ +
Sbjct: 420 YNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLIT 479
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK----- 319
G P VI+Y+++I Y N K EL + M+ G P + T+ ++S +K
Sbjct: 480 STGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKL 539
Query: 320 -----------------------------SGDFEEAIRITEKMKIVGSKPDSRFFNCLIY 350
+G ++A + ++M +G +PD++ +N LI
Sbjct: 540 KETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLIL 599
Query: 351 ---TLGRASRVQEAV-------------------------------YVYQVEMPENGVAP 376
G+ S ++ V YV+ EM ENG P
Sbjct: 600 GHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLP 659
Query: 377 DTSTFNTMITMFSHHGHHEKAFHVLEEM 404
+ N + T G ++A + EM
Sbjct: 660 NVCICNELSTGLRKDGRLQEAQSICSEM 687
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 134/296 (45%), Gaps = 19/296 (6%)
Query: 89 QDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWA------GSCPGYEHSSEIYEMMVD 142
+D V + P+ + N LI D +G R A S G + Y ++
Sbjct: 406 RDMVGRGVLPNANIYNMLI-----DGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIK 460
Query: 143 IL---GKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGL 199
L GK+++ ++M L+ S GH + T ++ +S AG + + ++ + GL
Sbjct: 461 GLCKMGKLKEAEEMFFLI--TSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGL 518
Query: 200 EKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQW 258
+ T + L+ KEG ++L ++F E L+ + P+ +N IH + + V +A
Sbjct: 519 KPTINTFHPLISGCSKEG-IKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFS 577
Query: 259 TIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLA 318
+EM G P +Y+++I + ++ S+ +L+D+M+A+G P TY+ ++
Sbjct: 578 LQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHC 637
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
DF A +M G P+ N L L + R+QEA + EM NG+
Sbjct: 638 DLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQSICS-EMIANGM 692
>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
Length = 969
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 121/491 (24%), Positives = 221/491 (45%), Gaps = 71/491 (14%)
Query: 86 SLKQDHVCNAIQPSHYLVNKLIHRFKD--DWKSALGIFRWAGSC---PGYEHSSEIYEMM 140
S+ + CN P+ L N L+H + + D+ A + C PGY +Y +
Sbjct: 333 SMMMNEGCN---PNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYV----VYNIF 385
Query: 141 VDIL--GKVRQMDQMRALLEEMSKGHIVT---LNTI--AKVMRRFSGAGQWEDAVRTFDE 193
+ + G+ + AL E++ + + + LN + A R G G+++ A +
Sbjct: 386 IGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKL 445
Query: 194 LGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINR 252
+ G +T T + ++ LC+ KVE A +F E+KS + P+ +T+ I I +CK+
Sbjct: 446 MMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGL 505
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
+++A+ EM+ GC P V++Y+ ++ +Y + + ++ M GC PN +TY+
Sbjct: 506 IEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSA 565
Query: 313 VMSYLAKSGDFEEAIRITEKM----KIVGS------------KPDSRFFNCLIYTLGRAS 356
++ L K+G+ ++A + KM VGS P+ + LI L +A
Sbjct: 566 LVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAH 625
Query: 357 RVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQT 416
+V +A + V M NG P+ ++ +I F G + A V M+K + P V T
Sbjct: 626 KVVDAQELLDV-MSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYL-PTVHT 683
Query: 417 FHPLLKSCFKTGKTD---ECLSQLLDD------------------------------MVN 443
+ L+ + FK + D + LSQ+L+ M+
Sbjct: 684 YTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMME 743
Query: 444 KHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYD 503
K + ++ TYT +I GL ++ K + + LF +MI P Y T R++++ + D
Sbjct: 744 KRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLD 803
Query: 504 AAEKIEAVMKK 514
A + + MK+
Sbjct: 804 EAHSLLSEMKQ 814
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/396 (26%), Positives = 175/396 (44%), Gaps = 54/396 (13%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
GY S Y +V +L QMD + +EMS+ G T+ + G+W DA
Sbjct: 202 GYRPSGATYNALVQVLATAGQMDMGFRVQKEMSELGFCTDKFTVGCFAQALCKEGRWSDA 261
Query: 188 VRTFDELGTFGLEKN--TETMNLLLD-TLCKEGKVELARSVFLELKSCIPPNAHTFNIFI 244
+ E F L+ T+ ++ L++ +L E L R + SCIP N T+ +
Sbjct: 262 L-VMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHR---MRCNSCIP-NVVTYRTLL 316
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
G+ K ++ + I M GC+P +++++ SYC ++ Y+LL+ M GCP
Sbjct: 317 AGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCP 376
Query: 305 PNVVTYTTVMS-----------------------YLAKS------------------GDF 323
P V Y + LA S G F
Sbjct: 377 PGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKF 436
Query: 324 EEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNT 383
++A +I + M G PD+ ++ +I L A +V++A ++Q EM GV PD T+
Sbjct: 437 DKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQ-EMKSVGVIPDVYTYTI 495
Query: 384 MITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVN 443
+I F G E+A +EM + C P+V T+ LL + KT + + S + MV+
Sbjct: 496 LIDSFCKVGLIEQARSWFDEMESV-GCSPSVVTYTALLHAYLKTKQVPQA-SDIFHRMVD 553
Query: 444 KHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
+ + TY+ ++ GLC+A + + A ++ +MIG
Sbjct: 554 A-GCAPNTITYSALVDGLCKAGESQKACEVYAKMIG 588
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 146/304 (48%), Gaps = 12/304 (3%)
Query: 186 DAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFI 244
DA D + + G E N + L+D CK GK++ A+ VF + C P HT+ I
Sbjct: 629 DAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLI 688
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
K R+D A + +M C P V++Y+ +I CR K +LL M+ +GC
Sbjct: 689 DAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCN 748
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
PNVVTYT+++ L KSG + ++++ +M G P+ + LI A + EA +
Sbjct: 749 PNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEA-HS 807
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
EM + + +++ FS + +LEE+ H ++ + LL
Sbjct: 808 LLSEMKQTYWPKYVQGYCSVVQGFSK--KFIASLGLLEELE--SHGMVSIAPVYGLLIDS 863
Query: 425 F-KTGKTDECLSQLLDDMVNKHHLSLDIT---TYTLVIHGLCRANKCEWAYLLFKEMIGH 480
F K G+ ++ L +L +M+ SL+IT TYT +I LC A++ E A+ L+ E+
Sbjct: 864 FSKAGRLEKAL-ELHKEMMEVSS-SLNITSKDTYTSLIQALCLASQLEKAFELYSEITRK 921
Query: 481 DITP 484
+ P
Sbjct: 922 GVVP 925
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 149/326 (45%), Gaps = 12/326 (3%)
Query: 126 SCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQW 184
S G E + IY+ ++D KV ++D + + MSK G++ T++T ++ +
Sbjct: 638 SSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRL 697
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNI 242
+ A++ ++ N T ++D LC+ G+ + A + +E + C PN T+
Sbjct: 698 DLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGC-NPNVVTYTS 756
Query: 243 FIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
I G K +VD + +M GC P ++Y +I C + + LL EM+
Sbjct: 757 LIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTY 816
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
P V Y +V+ +K F ++ + E+++ G + + LI + +A R+++A+
Sbjct: 817 WPKYVQGYCSVVQGFSKK--FIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKAL 874
Query: 363 YVYQVEMPENGVAPDTS--TFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
+++ M + TS T+ ++I EKAF + E+ + + P + F L
Sbjct: 875 ELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITR-KGVVPELSAFICL 933
Query: 421 LKSCFKTGKTDECLS---QLLDDMVN 443
+K K K +E L + D+ VN
Sbjct: 934 IKGLIKVNKWNEALQLCYSMCDEGVN 959
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 98/242 (40%), Gaps = 19/242 (7%)
Query: 276 STIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKI 335
+ I++ CR ++K E L ++ G P+ TY ++ LA +G + R+ ++M
Sbjct: 176 NVIVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSE 235
Query: 336 VGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHE 395
+G D C L + R +A+ + + E DT MI+ +
Sbjct: 236 LGFCTDKFTVGCFAQALCKEGRWSDALVMIERE----DFKLDTVLCTQMISGLMEASLFD 291
Query: 396 KAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC---LSQLLDDMVNKHHLSLDIT 452
+A L M + C PNV T+ LL K + C +S ++++ N + +
Sbjct: 292 EAISFLHRM-RCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNP-----S 345
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL------DEVKQKHMYDAAE 506
+ ++H C A +AY L M G P Y + + +E+ + AE
Sbjct: 346 LFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAE 405
Query: 507 KI 508
K+
Sbjct: 406 KV 407
>gi|224149779|ref|XP_002336862.1| predicted protein [Populus trichocarpa]
gi|222837029|gb|EEE75408.1| predicted protein [Populus trichocarpa]
Length = 370
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 123/235 (52%), Gaps = 1/235 (0%)
Query: 118 LGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVMR 176
L F WA G++ S E + MVD GKVR D +++ M + +T+ T + +MR
Sbjct: 131 LAFFNWASYQDGFDKSPEAFNEMVDFAGKVRMFDLAWHVIDLMKARDVEITVETFSILMR 190
Query: 177 RFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPN 236
R+ AG +A+ F+ + + + + ++L+ LC++ + A+ F LK P+
Sbjct: 191 RYVRAGLAAEAIHAFNRMEDYNCKPDKIAFSILISILCRKRRASEAQEFFDSLKDKFEPD 250
Query: 237 AHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLD 296
+ + GWC+ + EA+ EMK G P V +YS +I S CR ++ +++
Sbjct: 251 VIVYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVYTYSIVIDSLCRCGQITRAHDVFA 310
Query: 297 EMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYT 351
EM GC PN +TY ++M K+G E+ +++ +MK +G +PD+ +N LI T
Sbjct: 311 EMLDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMKRLGCEPDTVTYNFLIET 365
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 77/149 (51%), Gaps = 1/149 (0%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGT 196
+ +++ IL + R+ + + + + + ++R + AG +A R F E+
Sbjct: 220 FSILISILCRKRRASEAQEFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFGEMKV 279
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDE 255
G++ N T ++++D+LC+ G++ A VF E L + PN+ T+N + K R ++
Sbjct: 280 AGIKPNVYTYSIVIDSLCRCGQITRAHDVFAEMLDAGCQPNSITYNSLMRIHVKAGRTEK 339
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCR 284
+MK GC P ++Y+ +I+++C+
Sbjct: 340 VLQVYNQMKRLGCEPDTVTYNFLIETHCK 368
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 112/267 (41%), Gaps = 41/267 (15%)
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEA 256
G +K+ E N ++D K +LA V +K+ + TF+I + + + EA
Sbjct: 142 GFDKSPEAFNEMVDFAGKVRMFDLAWHVIDLMKARDVEITVETFSILMRRYVRAGLAAEA 201
Query: 257 QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSY 316
M+ + C P I++S +I CR+ S+ E D ++ + P+V+ YT ++
Sbjct: 202 IHAFNRMEDYNCKPDKIAFSILISILCRKRRASEAQEFFDSLKDK-FEPDVIVYTNLVRG 260
Query: 317 LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
++G+ I+E ++ G EM G+ P
Sbjct: 261 WCRAGN------ISEAERVFG------------------------------EMKVAGIKP 284
Query: 377 DTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQ 436
+ T++ +I G +A V EM C+PN T++ L++ K G+T++ L Q
Sbjct: 285 NVYTYSIVIDSLCRCGQITRAHDVFAEMLD-AGCQPNSITYNSLMRIHVKAGRTEKVL-Q 342
Query: 437 LLDDMVNKHHLSLDITTYTLVIHGLCR 463
+ + M + D TY +I C+
Sbjct: 343 VYNQM-KRLGCEPDTVTYNFLIETHCK 368
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 77/197 (39%), Gaps = 40/197 (20%)
Query: 288 FSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNC 347
F + ++D M+A+ V T++ +M ++G EAI +M+ KPD F+
Sbjct: 163 FDLAWHVIDLMKARDVEITVETFSILMRRYVRAGLAAEAIHAFNRMEDYNCKPDKIAFSI 222
Query: 348 LIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKL 407
LI L R R EA + + ++ PD + ++ + G+ +A V EM K+
Sbjct: 223 LISILCRKRRASEAQEFF--DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFGEM-KV 279
Query: 408 EHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKC 467
KPNV T Y++VI LCR +
Sbjct: 280 AGIKPNVYT-------------------------------------YSIVIDSLCRCGQI 302
Query: 468 EWAYLLFKEMIGHDITP 484
A+ +F EM+ P
Sbjct: 303 TRAHDVFAEMLDAGCQP 319
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 62/152 (40%), Gaps = 5/152 (3%)
Query: 345 FNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
FN ++ G+ A +V + M V TF+ ++ + G +A H M
Sbjct: 150 FNEMVDFAGKVRMFDLAWHVIDL-MKARDVEITVETFSILMRRYVRAGLAAEAIHAFNRM 208
Query: 405 NKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRA 464
+CKP+ F L+ + + E + D + +K D+ YT ++ G CRA
Sbjct: 209 EDY-NCKPDKIAFSILISILCRKRRASEA-QEFFDSLKDK--FEPDVIVYTNLVRGWCRA 264
Query: 465 NKCEWAYLLFKEMIGHDITPRYQTCRLILDEV 496
A +F EM I P T +++D +
Sbjct: 265 GNISEAERVFGEMKVAGIKPNVYTYSIVIDSL 296
>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
Length = 784
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 176/364 (48%), Gaps = 16/364 (4%)
Query: 154 RALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTL 213
R +++ + IVT N + V + A W++ V + G+ + T N L+
Sbjct: 196 RRMVDSGVQPAIVTYNVVLHVYSKM--AVPWKEVVELVASMKEHGVAPDRYTYNTLISCC 253
Query: 214 CKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCV 272
+ + A VF E+K S P+ TFN + + K R DEA IQEM+ GC P V
Sbjct: 254 RRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSV 313
Query: 273 ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEK 332
++Y+++I SY + + L EM+ +G P+VVTYTT++S L ++G + AI ++
Sbjct: 314 VTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIVEYDE 373
Query: 333 MKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
M G KP+ +N LI G + E + V+ E+ G PD T+NT++ +F +G
Sbjct: 374 MVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFD-ELRSAGFVPDIVTWNTLLAVFGQNG 432
Query: 393 HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
+ V +EM K + P T+ L+ S + G D + Q+ M+ + + D++
Sbjct: 433 LDSEVSGVFKEMKKAGYI-PERDTYVSLISSYSRCGLFDLAM-QIYKRMM-EAGIYPDVS 489
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMIGHDITP-RYQTCRLILDEVKQKHMYDAAEKIEAV 511
TY V+ L R + E A LF EM D P Y L+ H Y A++++
Sbjct: 490 TYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLL-------HAYANAKRLDK- 541
Query: 512 MKKL 515
MK L
Sbjct: 542 MKAL 545
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 180/391 (46%), Gaps = 15/391 (3%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAV 188
G H + + ++ + ++ + ALL+ + FS AG++ DAV
Sbjct: 136 GVLHHPRVLATAIRVMARAGRLAEASALLDAAPGPDAGAYTALVSA---FSRAGRFRDAV 192
Query: 189 RTFDELGTFGLEKNTETMNLLLDTLCK-----EGKVELARSVFLELKSCIPPNAHTFNIF 243
F + G++ T N++L K + VEL S+ + + P+ +T+N
Sbjct: 193 AVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASM---KEHGVAPDRYTYNTL 249
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
I + EA EMK G P +++++++ Y + + E++ EM+ GC
Sbjct: 250 ISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGC 309
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
PP+VVTY +++S K G E+A+ + ++M++ G KPD + LI L RA ++ A+
Sbjct: 310 PPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIV 369
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
Y EM NG P+ T+N +I M G + V +E+ P++ T++ LL +
Sbjct: 370 EYD-EMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGFV-PDIVTWNTLL-A 426
Query: 424 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
F D +S + +M ++ + TY +I R + A ++K M+ I
Sbjct: 427 VFGQNGLDSEVSGVFKEMKKAGYIP-ERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIY 485
Query: 484 PRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
P T +L + + ++ AEK+ A M++
Sbjct: 486 PDVSTYNAVLSALARGGRWEQAEKLFAEMEE 516
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 98/436 (22%), Positives = 194/436 (44%), Gaps = 46/436 (10%)
Query: 82 EVFQSLKQDHVCNAIQPSHYLVNKLIH--RFKDDWKSALGIFRWAGSCPGYEHSSEIYEM 139
E+ S+K+ + + P Y N LI R + +K A +F + G+E +
Sbjct: 229 ELVASMKE----HGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKAS-GFEPDKVTFNS 283
Query: 140 MVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGL 199
++D+ GK R+ D+ +++EM + G
Sbjct: 284 LLDVYGKARRHDEAIEVIQEMER----------------------------------VGC 309
Query: 200 EKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQW 258
+ T N L+ + K+G +E A ++ E++ I P+ T+ I G + ++D A
Sbjct: 310 PPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIV 369
Query: 259 TIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLA 318
EM +GC P + +Y+ +I+ + + F ++ + DE+++ G P++VT+ T+++
Sbjct: 370 EYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFG 429
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDT 378
++G E + ++MK G P+ + LI + R A+ +Y+ M E G+ PD
Sbjct: 430 QNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYK-RMMEAGIYPDV 488
Query: 379 STFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLL 438
ST+N +++ + G E+A + EM + + CKP+ ++ LL + + D+ + L
Sbjct: 489 STYNAVLSALARGGRWEQAEKLFAEMEERD-CKPDEYSYSSLLHAYANAKRLDK-MKALS 546
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQ 498
DD+ ++ + TLV+ + N A F E+ + ++ +
Sbjct: 547 DDIYSERIEPHNWLVKTLVLVN-SKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGK 605
Query: 499 KHMYDAAEKIEAVMKK 514
M EKI ++MK+
Sbjct: 606 NRMVRKVEKILSLMKE 621
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 152/325 (46%), Gaps = 12/325 (3%)
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINR 252
EL G+ + + + + + G++ A ++ L + P+A + + + + R
Sbjct: 131 ELHGEGVLHHPRVLATAIRVMARAGRLAEASAL---LDAAPGPDAGAYTALVSAFSRAGR 187
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCR-QYNFSKVYELLDEMQAQGCPPNVVTYT 311
+A + M G P +++Y+ ++ Y + + +V EL+ M+ G P+ TY
Sbjct: 188 FRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYN 247
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
T++S + ++EA ++ ++MK G +PD FN L+ G+A R EA+ V Q EM
Sbjct: 248 TLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQ-EMER 306
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
G P T+N++I+ + G E+A + +EM +++ KP+V T+ L+ + GK D
Sbjct: 307 VGCPPSVVTYNSLISSYVKDGLLEQAVALKQEM-EVKGIKPDVVTYTTLISGLDRAGKID 365
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVI--HGLCRANKCEWAYLLFKEMIGHDITPRYQTC 489
+ + D+MV ++ ++ TY +I HG+ K +F E+ P T
Sbjct: 366 AAIVE-YDEMV-RNGCKPNLCTYNALIKMHGV--RGKFPEMMAVFDELRSAGFVPDIVTW 421
Query: 490 RLILDEVKQKHMYDAAEKIEAVMKK 514
+L Q + + MKK
Sbjct: 422 NTLLAVFGQNGLDSEVSGVFKEMKK 446
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/383 (21%), Positives = 169/383 (44%), Gaps = 50/383 (13%)
Query: 90 DHVCNAIQPSHYLVNKLI--HRFKDDWKSALGIF---RWAGSCPGYEHSSEIYEMMVDIL 144
+ V N +P+ N LI H + + + +F R AG P + ++ +
Sbjct: 373 EMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIV----TWNTLLAVF 428
Query: 145 GKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNT 203
G+ ++ + +EM K G+I +T ++ +S G ++ A++ + + G+ +
Sbjct: 429 GQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDV 488
Query: 204 ETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWC------------- 248
T N +L L + G+ E A +F E+ + C P+ ++++ +H +
Sbjct: 489 STYNAVLSALARGGRWEQAEKLFAEMEERDC-KPDEYSYSSLLHAYANAKRLDKMKALSD 547
Query: 249 ----------------------KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQY 286
K+N + EA+ E++ C + + ++ Y +
Sbjct: 548 DIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNR 607
Query: 287 NFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFN 346
KV ++L M+ + TY ++M ++ GD E+ I ++K G +PD +N
Sbjct: 608 MVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYN 667
Query: 347 CLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNK 406
+IY GR +++EA ++ EM +G+ PD T+N + + + E+A ++ M
Sbjct: 668 TVIYAYGRKGQMKEASRLFS-EMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYM-V 725
Query: 407 LEHCKPNVQTFHPLLKSCFKTGK 429
+ CKPN +T++ +++ + GK
Sbjct: 726 TQGCKPNERTYNSIVEGYCRNGK 748
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 119/261 (45%), Gaps = 46/261 (17%)
Query: 261 QEMKGHGC--HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLA 318
+E+ G G HP V++ T I+ R ++ LLD A G P+ YT ++S +
Sbjct: 130 RELHGEGVLHHPRVLA--TAIRVMARAGRLAEASALLD--AAPG--PDAGAYTALVSAFS 183
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDT 378
++G F +A+ + +M G +P +N +++ + + + V M E+GVAPD
Sbjct: 184 RAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDR 243
Query: 379 STFNTMIT-----------------------------------MFSHHGHHEKAFHVLEE 403
T+NT+I+ ++ H++A V++E
Sbjct: 244 YTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQE 303
Query: 404 MNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCR 463
M ++ C P+V T++ L+ S K G ++ ++ L + + D+ TYT +I GL R
Sbjct: 304 MERV-GCPPSVVTYNSLISSYVKDGLLEQAVA--LKQEMEVKGIKPDVVTYTTLISGLDR 360
Query: 464 ANKCEWAYLLFKEMIGHDITP 484
A K + A + + EM+ + P
Sbjct: 361 AGKIDAAIVEYDEMVRNGCKP 381
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 103/227 (45%), Gaps = 2/227 (0%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRF-SGAGQWEDAVRTFDELG 195
Y ++ +++D+M+AL +++ I N + K + S +A + F EL
Sbjct: 526 YSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELR 585
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVD 254
+ +N ++ K V + +K S I +A T+N +H + ++ +
Sbjct: 586 QKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCE 645
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
+ + + E+K G P SY+T+I +Y R+ + L EM+ G P+VVTY +
Sbjct: 646 KCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFV 705
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
+ FEEAI + M G KP+ R +N ++ R ++ +A
Sbjct: 706 KSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDA 752
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK----EGKVELARSVFLEL 229
V+ + GQ ++A R F E+ GL+ + T N+ + + E +EL R ++
Sbjct: 669 VIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVR--YMVT 726
Query: 230 KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
+ C PN T+N + G+C+ ++ +A+ + +
Sbjct: 727 QGC-KPNERTYNSIVEGYCRNGKLTDAKIFVSNL 759
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 177/371 (47%), Gaps = 19/371 (5%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y M+D + + + LL+EM + I + T + ++ + ++ +A +DE+
Sbjct: 287 YNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEML 346
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKINRV 253
G+ NT T N ++D CK+ +++ A +F + K C P+ TFN I G+C R+
Sbjct: 347 PRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGC-SPDVFTFNTLIDGYCGAKRI 405
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
D+ + EM G +Y+T+I +C + + +L +M + G P++VT T+
Sbjct: 406 DDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTL 465
Query: 314 MSYLAKSGDFEEAIRITEKMK-----------IVGSKPDSRFFNCLIYTLGRASRVQEAV 362
+ L +G ++A+ + + M+ G +PD + +N LI L + EA
Sbjct: 466 LDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAE 525
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLK 422
+Y+ EMP G+ P+T T+++MI ++A + + M + P+V TF+ L+
Sbjct: 526 ELYK-EMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGS-KSFSPDVVTFNTLVS 583
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
K G+ D+ L + + + + D TY +IHG + A +F+EMI +
Sbjct: 584 GYCKAGRVDDGLELFCE--MGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGV 641
Query: 483 TPRYQTCRLIL 493
P T R +L
Sbjct: 642 YPDTITIRSML 652
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 178/398 (44%), Gaps = 17/398 (4%)
Query: 94 NAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMD 151
+ +QP+ ++ D SAL + R + + IY ++D L K +
Sbjct: 207 DGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHS 266
Query: 152 QMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLL 210
L EM KG L T ++ F +G+W +A R E+ + N T + L+
Sbjct: 267 DAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALI 326
Query: 211 DTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCH 269
+ KE K A ++ E L I PN T+N I G+CK NR+D A+ M GC
Sbjct: 327 NAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCS 386
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI 329
P V +++T+I YC ELL EM G + TY T++ GD A+ +
Sbjct: 387 PDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDL 446
Query: 330 TEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ----------VEMPENGVAPDTS 379
+++M G PD N L+ L ++++A+ +++ P NGV PD
Sbjct: 447 SQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQ 506
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLD 439
T+N +I+ + G +A + +EM PN T+ ++ K + DE +Q+ D
Sbjct: 507 TYNILISGLINEGKFLEAEELYKEMPH-RGIVPNTITYSSMINGLCKQSRLDEA-TQMFD 564
Query: 440 DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
M +K S D+ T+ ++ G C+A + + LF EM
Sbjct: 565 SMGSK-SFSPDVVTFNTLVSGYCKAGRVDDGLELFCEM 601
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 173/375 (46%), Gaps = 19/375 (5%)
Query: 155 ALLEEMSKGHI----VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLL 210
ALL+ M + + +T TI M + + +R +E+ ++ N + ++
Sbjct: 199 ALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSH--IKPNVVIYSAII 256
Query: 211 DTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCH 269
D L K+G+ A +++ E++ I P+ T+N I G+C R EAQ +QEM +
Sbjct: 257 DGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKIN 316
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI 329
P V++YS +I +Y ++ F + EL DEM +G PN +TY +++ K + A +
Sbjct: 317 PNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHM 376
Query: 330 TEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFS 389
M G PD FN LI A R+ + + EM E G+ DT+T+NT+I F
Sbjct: 377 FYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLH-EMTETGLVADTTTYNTLIHGFC 435
Query: 390 HHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL---------LDD 440
G A + ++M C P++ T + LL GK + L LD
Sbjct: 436 LVGDLNAALDLSQQMISSGVC-PDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDA 494
Query: 441 MVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQK 499
+ + D+ TY ++I GL K A L+KEM I P T +++ + KQ
Sbjct: 495 SRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQS 554
Query: 500 HMYDAAEKIEAVMKK 514
+ +A + +++ K
Sbjct: 555 RLDEATQMFDSMGSK 569
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 144/292 (49%), Gaps = 10/292 (3%)
Query: 205 TMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
+ N+L+ C K+ A S F ++ K P+ TF+ +HG C +RV EA +M
Sbjct: 114 SFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM 173
Query: 264 KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF 323
C P V++++T++ CR+ + LLD M G PN +TY T++ + K GD
Sbjct: 174 ----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDT 229
Query: 324 EEAIRITEKMKIVGS-KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFN 382
A+ + KM+ + KP+ ++ +I L + R +A +Y EM E G+ PD T+N
Sbjct: 230 VSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLY-TEMQEKGIFPDLFTYN 288
Query: 383 TMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMV 442
MI F G +A +L+EM + PNV T+ L+ + K K E +L D+M+
Sbjct: 289 CMIDGFCSSGRWSEAQRLLQEMLE-RKINPNVVTYSALINAYVKERKFFEA-EELYDEML 346
Query: 443 NKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
+ + + TY +I G C+ N+ + A +F M +P T ++D
Sbjct: 347 PRGIIP-NTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLID 397
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/382 (23%), Positives = 176/382 (46%), Gaps = 19/382 (4%)
Query: 41 IESYCSDGARLDHHQVL--CVDSPRLPDIDVIISKVHVGSSEDEVFQS--LKQDHVCNAI 96
I+ +CS G + ++L ++ P++ + ++ E + F++ L + + I
Sbjct: 291 IDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGI 350
Query: 97 QPSHYLVNKLIHRF-KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRA 155
P+ N +I F K + A + + G + ++D +++D
Sbjct: 351 IPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTE 410
Query: 156 LLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLC 214
LL EM++ G + T ++ F G A+ ++ + G+ + T N LLD LC
Sbjct: 411 LLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLC 470
Query: 215 KEGKVELARSVF-------LELKSCIP-----PNAHTFNIFIHGWCKINRVDEAQWTIQE 262
GK++ A +F ++L + P P+ T+NI I G + EA+ +E
Sbjct: 471 DNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKE 530
Query: 263 MKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGD 322
M G P I+YS++I C+Q + ++ D M ++ P+VVT+ T++S K+G
Sbjct: 531 MPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGR 590
Query: 323 FEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFN 382
++ + + +M G D+ + LI+ + + A+ ++Q EM +GV PDT T
Sbjct: 591 VDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQ-EMISSGVYPDTITIR 649
Query: 383 TMITMFSHHGHHEKAFHVLEEM 404
+M+T+ ++A +LE++
Sbjct: 650 SMLTVLWSKEELKRAVAMLEDL 671
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 80/155 (51%), Gaps = 1/155 (0%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTF 240
G++ +A + E+ G+ NT T + +++ LCK+ +++ A +F + S P+ TF
Sbjct: 519 GKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTF 578
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
N + G+CK RVD+ EM G I+Y T+I + + N + ++ EM +
Sbjct: 579 NTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMIS 638
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKI 335
G P+ +T ++++ L + + A+ + E +++
Sbjct: 639 SGVYPDTITIRSMLTVLWSKEELKRAVAMLEDLQM 673
>gi|255660888|gb|ACU25613.1| pentatricopeptide repeat-containing protein [Verbena rigida]
Length = 481
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 193/388 (49%), Gaps = 14/388 (3%)
Query: 100 HYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEE 159
H LV ++H K + AL FRW +EH+ E + +++ILG+ +++ R +L +
Sbjct: 12 HELVYNVLHSSKTS-EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLD 70
Query: 160 M-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
M KG + ++ + G +++V+ F ++ G+E+ ++ N L + + G+
Sbjct: 71 MPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNXLFKVILRRGR 130
Query: 219 VELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
+A+ F + L I P HTFN+ I G+ +V+ A ++MK P V++Y+T
Sbjct: 131 YMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNT 190
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+I Y R + + EM+ + P VVTYTT++ ++A+R+ E+MK G
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFG 250
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP-DTSTFNTMITMFSHHGHHEK 396
KP++ ++ L+ L A ++ EA + + EM + +AP D S F +I+ G+ +
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMSEARVILK-EMMDKYLAPTDNSIFMRLISSHCKSGNLDA 309
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK-------HHLSL 449
A VL+ M +L + L+++ K G+ D+ + +LLD ++ K L L
Sbjct: 310 AADVLKAMIRLS-VPTEAGHYGXLIENFCKXGQYDKAV-KLLDKLIEKDIILRPQSTLHL 367
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEM 477
+ + Y +I LC + A L +++
Sbjct: 368 EPSAYNPMIEYLCNNGQXXKAETLVRQL 395
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 133/311 (42%), Gaps = 4/311 (1%)
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQ 257
E N ET +++ L + K+ AR + L++ K + + + + I + K V E+
Sbjct: 41 FEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESV 100
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
Q+M+ G + SY+ + + R+ + ++M ++G P T+ ++
Sbjct: 101 KMFQKMEELGVERTIKSYNXLFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGF 160
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
SG E A R E MK PD +N +I R +++EA Y VEM + P
Sbjct: 161 FLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEK-YFVEMKGRNIEPT 219
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
T+ T+I + + A ++EEM KPN T+ LL K E +
Sbjct: 220 VVTYTTLIKGYVSVDQVDDALRLVEEMKGF-GIKPNAITYSTLLPGLCNAEKMSEA-RVI 277
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVK 497
L +M++K+ D + + +I C++ + A + K MI + +++
Sbjct: 278 LKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGXLIENFC 337
Query: 498 QKHMYDAAEKI 508
+ YD A K+
Sbjct: 338 KXGQYDKAVKL 348
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 127/267 (47%), Gaps = 6/267 (2%)
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
+ ++++ A+ + +M G + +I SY ++ + ++ +M+ G +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIK 116
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
+Y + + + G + A R KM G +P FN +I+ + +V+ A ++ +
Sbjct: 117 SYNXLFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFE-D 175
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M ++PD T+NTMI + E+A EM K + +P V T+ L+K
Sbjct: 176 MKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEM-KGRNIEPTVVTYTTLIKGYVSVD 234
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ D+ L +L+++M + + TY+ ++ GLC A K A ++ KEM+ + P +
Sbjct: 235 QVDDAL-RLVEEM-KGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNS 292
Query: 489 C--RLILDEVKQKHMYDAAEKIEAVMK 513
RLI K ++ AA+ ++A+++
Sbjct: 293 IFMRLISSHCKSGNLDAAADVLKAMIR 319
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 5/205 (2%)
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N T+ ++ L ++ A I M G + D + +I + G+ VQE+V ++
Sbjct: 44 NRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMF 103
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
Q +M E GV ++N + + G + A +M E +P TF+ ++ F
Sbjct: 104 Q-KMEELGVERTIKSYNXLFKVILRRGRYMMAKRYFNKMLS-EGIEPTRHTFNVMIWGFF 161
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
+GK E ++ +DM ++ +S D+ TY +I+G R K E A F EM G +I P
Sbjct: 162 LSGKV-ETANRFFEDMKSRE-ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPT 219
Query: 486 YQT-CRLILDEVKQKHMYDAAEKIE 509
T LI V + DA +E
Sbjct: 220 VVTYTTLIKGYVSVDQVDDALRLVE 244
>gi|255660924|gb|ACU25631.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
Length = 484
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/389 (25%), Positives = 196/389 (50%), Gaps = 14/389 (3%)
Query: 100 HYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEE 159
H LV ++H K+ + AL FRW +EH+ E + +++ILG+ +++ R +L +
Sbjct: 12 HELVYNVLHGAKNS-EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLD 70
Query: 160 MSKGHIVTLNTIAKVM-RRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
M K + + +M + G +++V+ F ++ G+E+ ++ + L + + G+
Sbjct: 71 MPKKGLEWDEDMWVLMIDSYGKEGIVQESVKLFQKMEELGVERTIKSYDALFKVIMRRGR 130
Query: 219 VELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
+A+ F ++ S I P HTFN+ I G+ +V+ A ++MK P VI+Y+T
Sbjct: 131 FMMAKRYFNKMLSXGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVITYNT 190
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+I Y R + + EM+ + P VVTYTT++ ++A+R+ E+MK G
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGKNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGYG 250
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP-DTSTFNTMITMFSHHGHHEK 396
KP++ ++ L+ L A ++ EA + + EM + +AP D S F +I+ G+ +
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMSEARSILK-EMVDKYIAPTDNSIFMRLISSQCKAGNLDA 309
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK-------HHLSL 449
A VL+ M +L + L+++ K G+ D+ + +LLD ++ K L +
Sbjct: 310 AADVLKSMIRLS-VPTEAGHYGVLIENYCKAGQYDQAV-KLLDKLIEKDIIVRPQSTLHM 367
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMI 478
+ + Y ++ LC + A L ++++
Sbjct: 368 EPSAYNPIVEYLCNNGQTSKAEALVRQLM 396
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 143/331 (43%), Gaps = 5/331 (1%)
Query: 180 GAGQWEDAVRTFDELGTFGL-EKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNA 237
GA E A++ F + L E N ET +++ L + K+ AR + L++ K + +
Sbjct: 21 GAKNSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDE 80
Query: 238 HTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDE 297
+ + I + K V E+ Q+M+ G + SY + + R+ F ++
Sbjct: 81 DMWVLMIDSYGKEGIVQESVKLFQKMEELGVERTIKSYDALFKVIMRRGRFMMAKRYFNK 140
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
M + G P T+ ++ SG E A R E MK PD +N +I R +
Sbjct: 141 MLSXGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVITYNTMINGYYRVKK 200
Query: 358 VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTF 417
++EA Y VEM + P T+ T+I + + A ++EEM K KPN T+
Sbjct: 201 MEEAEK-YFVEMKGKNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEM-KGYGIKPNAITY 258
Query: 418 HPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
LL K E S +L +MV+K+ D + + +I C+A + A + K M
Sbjct: 259 STLLPGLCNAEKMSEARS-ILKEMVDKYIAPTDNSIFMRLISSQCKAGNLDAAADVLKSM 317
Query: 478 IGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
I + ++++ + YD A K+
Sbjct: 318 IRLSVPTEAGHYGVLIENYCKAGQYDQAVKL 348
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 129/267 (48%), Gaps = 6/267 (2%)
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
+ ++++ A+ + +M G + +I SY ++ + +L +M+ G +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVLMIDSYGKEGIVQESVKLFQKMEELGVERTIK 116
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
+Y + + + G F A R KM G +P FN +I+ + +V+ A ++ +
Sbjct: 117 SYDALFKVIMRRGRFMMAKRYFNKMLSXGIEPTRHTFNVMIWGFFLSGKVETANRFFE-D 175
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M ++PD T+NTMI + E+A EM K ++ +P V T+ L+K
Sbjct: 176 MKSREISPDVITYNTMINGYYRVKKMEEAEKYFVEM-KGKNIEPTVVTYTTLIKGYVSVD 234
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ D+ L +L+++M + + + TY+ ++ GLC A K A + KEM+ I P +
Sbjct: 235 QVDDAL-RLVEEM-KGYGIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYIAPTDNS 292
Query: 489 C--RLILDEVKQKHMYDAAEKIEAVMK 513
RLI + K ++ AA+ ++++++
Sbjct: 293 IFMRLISSQCKAGNLDAAADVLKSMIR 319
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 5/205 (2%)
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N T+ ++ L ++ A I M G + D + +I + G+ VQE+V ++
Sbjct: 44 NRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVLMIDSYGKEGIVQESVKLF 103
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
Q +M E GV +++ + + G A +M +P TF+ ++ F
Sbjct: 104 Q-KMEELGVERTIKSYDALFKVIMRRGRFMMAKRYFNKMLS-XGIEPTRHTFNVMIWGFF 161
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
+GK E ++ +DM ++ +S D+ TY +I+G R K E A F EM G +I P
Sbjct: 162 LSGKV-ETANRFFEDMKSRE-ISPDVITYNTMINGYYRVKKMEEAEKYFVEMKGKNIEPT 219
Query: 486 YQT-CRLILDEVKQKHMYDAAEKIE 509
T LI V + DA +E
Sbjct: 220 VVTYTTLIKGYVSVDQVDDALRLVE 244
>gi|125538899|gb|EAY85294.1| hypothetical protein OsI_06665 [Oryza sativa Indica Group]
Length = 632
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 172/390 (44%), Gaps = 42/390 (10%)
Query: 120 IFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI--VTLNTIAKVMRR 177
FRWA Y+H + Y ++ L V Q +M +++EM + I VT +++V+R
Sbjct: 109 FFRWAAKKRNYQHDTSTYMALIHCLELVEQYGEMWKMIQEMVRSPICVVTPMELSQVIRM 168
Query: 178 FSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNA 237
A A+ F ++ + + N ++ L EG+ E ++ E+ +
Sbjct: 169 LGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSN------ 222
Query: 238 HTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDE 297
+GH C P ++YS +I ++C+ LL+E
Sbjct: 223 --------------------------EGH-CQPDTVTYSALISAFCKLGRQDSAIRLLNE 255
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
M+ G P YT ++S K + A+ + E+M+ + +PD + LI LG+A R
Sbjct: 256 MKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGR 315
Query: 358 VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTF 417
+ EA + Y EM G PDT N MI G + + EEM + HC PNV T+
Sbjct: 316 IDEAYHFYH-EMQREGCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMG-VSHCIPNVVTY 373
Query: 418 HPLLKSCFKT-GKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKE 476
+ ++K+ F++ + E S + + +S TY+++I G C+ N+ E A +L +E
Sbjct: 374 NTIIKALFESKSRVSEVFSWF--ERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEE 431
Query: 477 MIGHDITP-RYQTCRLILDEVKQKHMYDAA 505
M P C LI D + + YD A
Sbjct: 432 MDEKGFPPCPAAYCSLI-DALGKAKRYDLA 460
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 185/381 (48%), Gaps = 16/381 (4%)
Query: 94 NAIQPSHYLVNKLIHRF--KDDWKSALGIF---RWAGSCPGYEHSSEIYEMMVDILGKVR 148
N +QP+ + +I F D+ AL +F R+ P +E+ + LGK
Sbjct: 259 NGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTEL----IRGLGKAG 314
Query: 149 QMDQMRALLEEMSKGHIVTLNTIAKVMRRFSG-AGQWEDAVRTFDELGTFGLEKNTETMN 207
++D+ EM + + M F G AG+ +D ++ F+E+G N T N
Sbjct: 315 RIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYN 374
Query: 208 LLLDTLCK-EGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKG 265
++ L + + +V S F +K S I P+ T++I I G+CK NR+++A ++EM
Sbjct: 375 TIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDE 434
Query: 266 HGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEE 325
G PC +Y ++I + + + EL E++ + Y ++ +L K+G ++
Sbjct: 435 KGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDD 494
Query: 326 AIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMI 385
AI + ++M +G P+ +N L+ L RA + EA+ + +M E+G PD +++N ++
Sbjct: 495 AINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMR-KMQEHGCLPDINSYNIIL 553
Query: 386 TMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKH 445
+ G +A +L M K KP+ +++ +L + G +E ++L+ +M N
Sbjct: 554 NGLAKTGGPHRAMEMLTNM-KNSTIKPDAVSYNTVLSALSHAGMFEEA-AELMKEM-NAL 610
Query: 446 HLSLDITTYTLVIHGLCRANK 466
D+ TY+ ++ + + ++
Sbjct: 611 GFEYDLITYSSILEAIGKVDQ 631
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/416 (27%), Positives = 191/416 (45%), Gaps = 13/416 (3%)
Query: 82 EVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDD--WKSALGIFRWAGSCPGYEHSSEIYEM 139
E FQ L++ C +I + L+ ++ D WK + Y +
Sbjct: 175 EAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFVKSGNIVNVYT-----LNI 229
Query: 140 MVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
MV+ L K ++D + L EM KG L T ++ + G +A D + G
Sbjct: 230 MVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKG 289
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQ 257
L+ T N L++ LCKEG E A+ V E L + PNA TFN + C+ V EA+
Sbjct: 290 LKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAE 349
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
EM G P +IS+S+I+ + R + ++M+ G P+ V YT +++
Sbjct: 350 RVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGY 409
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
++ D A+++ +M G D +N L+ L R + +A +++ EM E GV PD
Sbjct: 410 CRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFK-EMVERGVFPD 468
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
T T+I + G+ KA + E M L KP+V T++ L+ K G+ ++ +L
Sbjct: 469 FYTLTTLIHGYCKDGNMTKALSLFETMT-LRSLKPDVVTYNTLMDGFCKVGEMEKA-KEL 526
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
DM+++ I +++++I+G C A+ L+ EM I P TC I+
Sbjct: 527 WYDMISREIFPSYI-SFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTII 581
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 163/316 (51%), Gaps = 5/316 (1%)
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSC 232
++R + A + + F L G + N LL + K G V+LA V+ + +KS
Sbjct: 160 LIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFVKSG 219
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
N +T NI ++ CK ++D + EM+ G + +++Y+T++ +YCR+ S+ +
Sbjct: 220 NIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAF 279
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
L+D M +G P + TY +++ L K G +E A R+ ++M VG P++ FN ++
Sbjct: 280 GLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVES 339
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
R V EA V+ EM + GV PD +F++++ +FS +G +A E+M + P
Sbjct: 340 CRKEDVWEAERVFN-EMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGV-GLVP 397
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
+ + L+ + L ++ ++MV + + +D+ TY +++GLCR + A
Sbjct: 398 DTVIYTILINGYCRNDDVSGAL-KMRNEMVERGCV-MDVVTYNTLLNGLCRGKMLDDADE 455
Query: 473 LFKEMIGHDITPRYQT 488
LFKEM+ + P + T
Sbjct: 456 LFKEMVERGVFPDFYT 471
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 143/270 (52%), Gaps = 3/270 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +++ L + + +D L +EM +G T+ ++ + G A+ F+ +
Sbjct: 437 YNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMT 496
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVD 254
L+ + T N L+D CK G++E A+ ++ ++ S I P+ +F+I I+G+C + V
Sbjct: 497 LRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVS 556
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA EMK G P +++ +TII+ Y R N SK + L+ M ++G PP+ +TY T++
Sbjct: 557 EAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLI 616
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
+ K +F+ A + M+ G P+ +N ++ R R+QEA V +M + G+
Sbjct: 617 NSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLH-KMIDKGI 675
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
PD ST+ ++I + + ++AF V +EM
Sbjct: 676 NPDKSTYTSLINGYVSKDNMKEAFRVHDEM 705
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 108/422 (25%), Positives = 187/422 (44%), Gaps = 24/422 (5%)
Query: 95 AIQPSHYLVNKLIH---------RFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILG 145
++P + N LI+ R K LG+ G CP +++ M+V+
Sbjct: 289 GLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGV----GLCP---NAATFNPMLVESCR 341
Query: 146 KVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTET 205
K + R E + +G + L + + ++ FS G+ A+ F+++ GL +T
Sbjct: 342 KEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVI 401
Query: 206 MNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
+L++ C+ V A + E+ + C+ + T+N ++G C+ +D+A +EM
Sbjct: 402 YTILINGYCRNDDVSGALKMRNEMVERGCVM-DVVTYNTLLNGLCRGKMLDDADELFKEM 460
Query: 264 KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF 323
G P + +T+I YC+ N +K L + M + P+VVTY T+M K G+
Sbjct: 461 VERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEM 520
Query: 324 EEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNT 383
E+A + M P F+ LI V EA ++ EM E G+ P T NT
Sbjct: 521 EKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWD-EMKEKGIKPTLVTCNT 579
Query: 384 MITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVN 443
+I + G+ KA L M E P+ T++ L+ S K D L+++M
Sbjct: 580 IIKGYLRAGNLSKANDFLNTMIS-EGVPPDCITYNTLINSFVKEENFDRAFF-LINNMEE 637
Query: 444 KHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT-CRLILDEVKQKHMY 502
+ L ++ TY ++ G R + + A ++ +MI I P T LI V + +M
Sbjct: 638 RGLLP-NLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMK 696
Query: 503 DA 504
+A
Sbjct: 697 EA 698
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 150/326 (46%), Gaps = 6/326 (1%)
Query: 184 WEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNI 242
WE A R F+E+ G+ + + + ++ + G++ A + F ++K + P+ + I
Sbjct: 346 WE-AERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTI 404
Query: 243 FIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
I+G+C+ + V A EM GC V++Y+T++ CR EL EM +G
Sbjct: 405 LINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERG 464
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
P+ T TT++ K G+ +A+ + E M + KPD +N L+ + +++A
Sbjct: 465 VFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAK 524
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLK 422
++ +M + P +F+ +I F G +AF + +EM K + KP + T + ++K
Sbjct: 525 ELWY-DMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEM-KEKGIKPTLVTCNTIIK 582
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
+ G + + L+ M+++ + D TY +I+ + + A+ L M +
Sbjct: 583 GYLRAGNLSKA-NDFLNTMISE-GVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGL 640
Query: 483 TPRYQTCRLILDEVKQKHMYDAAEKI 508
P T IL + AE +
Sbjct: 641 LPNLVTYNAILGGFSRHGRMQEAEMV 666
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 123/269 (45%), Gaps = 11/269 (4%)
Query: 81 DEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWK--SALGIFRWAGSCPGYEHSSEIYE 138
DE+F+ + V + P Y + LIH + D AL +F + + Y
Sbjct: 454 DELFKEM----VERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETM-TLRSLKPDVVTYN 508
Query: 139 MMVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDAVRTFDELGTF 197
++D KV +M++ + L +M I + + + ++ F G +A R +DE+
Sbjct: 509 TLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEK 568
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVFLE--LKSCIPPNAHTFNIFIHGWCKINRVDE 255
G++ T N ++ + G + A FL + +PP+ T+N I+ + K D
Sbjct: 569 GIKPTLVTCNTIIKGYLRAGNLSKAND-FLNTMISEGVPPDCITYNTLINSFVKEENFDR 627
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
A + I M+ G P +++Y+ I+ + R + +L +M +G P+ TYT++++
Sbjct: 628 AFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLIN 687
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRF 344
+ +EA R+ ++M G PD +F
Sbjct: 688 GYVSKDNMKEAFRVHDEMLQRGFVPDDKF 716
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 93/237 (39%), Gaps = 39/237 (16%)
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
V+ + +I++Y + + E ++ +G ++ ++ + K G + A ++ E
Sbjct: 154 VVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYE 213
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHH 391
G+ + N ++ L + ++ + V VY EM E GV D T+NT++ +
Sbjct: 214 DFVKSGNIVNVYTLNIMVNALCKDGKL-DNVGVYLSEMEEKGVYADLVTYNTLVNAYCRR 272
Query: 392 GHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDI 451
G +AF L+D M K L +
Sbjct: 273 GLVSEAFG-------------------------------------LVDCMAGKG-LKPGL 294
Query: 452 TTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
TY +I+GLC+ E A + EM+G + P T +L E +K AE++
Sbjct: 295 FTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERV 351
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 130/498 (26%), Positives = 221/498 (44%), Gaps = 54/498 (10%)
Query: 37 SSSPIESYCSDGARLDHHQVLCVDSPRLP-----DIDVIISKVHVGSSEDEVFQSLKQDH 91
S + I +YC LC+ RLP + + + +GS + Q L D
Sbjct: 60 SLTSINAYCISRPFFWFTSFLCI--FRLPFVSYSNANNSFQYLDIGSLRKIIQQDLWNDP 117
Query: 92 VC-----NAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGK 146
+A+ P V+K++ ++D K AL F+WAGS G+ H++E Y ++V ++ +
Sbjct: 118 KIVVLFDSALAP--IWVSKILLGLREDPKLALKFFKWAGSQVGFRHTTESYCIIVHLVFR 175
Query: 147 VRQMDQMRALLEE------MSKGH-IVTLNTIAKVMRRF--SGAGQWEDAVRTFDELGTF 197
R ++E M G + + + R SG+G ++ F ELG
Sbjct: 176 ARMYTDAHDTVKEVIMNSRMDMGFPVCNIFDMLWSTRNICVSGSGVFDVLFSVFVELGL- 234
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQ 257
LE+ E + ++ R++ P A + N +H K +
Sbjct: 235 -LEEANECFS----------RMRNFRTL---------PKARSCNFLLHRLSKSGNGQLVR 274
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
+M G G P V +Y+ +I C++ + L +M+ G P+VVTY +++
Sbjct: 275 KFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGY 334
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
K G EE + +MK VG PD +N LI + ++ A + Y EM NG+ P+
Sbjct: 335 GKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRA-FEYFSEMKNNGLKPN 393
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
T++T+I F G + A + +M + PN T+ L+ + K G E +L
Sbjct: 394 VVTYSTLIDAFCKEGMMQGAIKLFVDMRR-TGLLPNEFTYTSLIDANCKAGNLTEAW-KL 451
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVK 497
L+DM+ + + L+I TYT ++ GLC+A + A +F+ M+ I+P Q ++
Sbjct: 452 LNDML-QAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALV---- 506
Query: 498 QKHMYDAAEKIEAVMKKL 515
H Y AE++E MK L
Sbjct: 507 --HGYIKAERMEDAMKIL 522
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 177/389 (45%), Gaps = 6/389 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
G + + Y ++D K M L +M + G + T ++ AG +A
Sbjct: 389 GLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEA 448
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHG 246
+ +++ G++ N T LLD LCK G++ A VF LK I PN + +HG
Sbjct: 449 WKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHG 508
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
+ K R+++A +++M P +I Y +II +C Q + +L+EM+++G N
Sbjct: 509 YIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISAN 568
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
V TT++ K+G +A+ ++M+ VG + + LI L +A V+ AV Y
Sbjct: 569 PVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVD-YF 627
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
M G+ P+ + + ++I + E A + +EM + P++ F L+ K
Sbjct: 628 CRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEM-QCRGMTPDITAFTALIDGNLK 686
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
G E L +L + + + D+ YT ++ G + + A F EMI I P
Sbjct: 687 HGNLQEAL--VLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEE 744
Query: 487 QTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
C +L E ++ D A +++ M+++
Sbjct: 745 VLCICLLREYYKRGQLDEAIELKNEMERM 773
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 128/297 (43%), Gaps = 46/297 (15%)
Query: 81 DEVFQSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYE 138
+EVF+S+ +D I P+ + L+H + + + A+ I + C + +Y
Sbjct: 484 EEVFRSMLKD----GISPNQQVYTALVHGYIKAERMEDAMKILKQMTEC-NIKPDLILYG 538
Query: 139 MMVDILGKVRQMDQMRALLEEMSKGHIVTLNTI--AKVMRRFSGAGQWEDAVRTFDELGT 196
++ R++++ + +LEEM K ++ N + ++ + AG+ DA+ F E+
Sbjct: 539 SIIWGHCSQRKLEETKLILEEM-KSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQD 597
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDE 255
G+E T +L+D LCK G VELA F + S + PN + I G CK N ++
Sbjct: 598 VGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIES 657
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYN---------------------------- 287
A+ EM+ G P + +++ +I + N
Sbjct: 658 AKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVS 717
Query: 288 -FSKVYEL------LDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
FS+ EL +EM +G P V ++ K G +EAI + +M+ +G
Sbjct: 718 GFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMG 774
>gi|334183891|ref|NP_177483.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806278|sp|Q9FX35.2|PP117_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g73400, mitochondrial; Flags: Precursor
gi|332197336|gb|AEE35457.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 568
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/425 (24%), Positives = 197/425 (46%), Gaps = 17/425 (4%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILG----KVRQMDQMRALL 157
+V K++ R + + K+A F WAG Y H Y M+DIL K +Q + +L
Sbjct: 127 VVCKILQRLQYEEKTAFRFFTWAGHQEHYSHEPIAYNEMIDILSSTKYKNKQFRIVIDML 186
Query: 158 EEMSKGH--IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTE--TMNLLLDTL 213
+ M + + +V ++ + +++R++ ++ V+ F + ++ E N+LLD L
Sbjct: 187 DYMKRNNKTVVLVDVLLEILRKY--CERYLTHVQKFAKRKRIRVKTQPEINAFNMLLDAL 244
Query: 214 CKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI 273
CK G V+ ++ ++ + P+A+TFN+ GWC++ +A ++EM G P
Sbjct: 245 CKCGLVKEGEALLRRMRHRVKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENF 304
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQG---CPPNVVTYTTVMSYLAKSGDFEEAIRIT 330
+Y I ++C+ + +L D M +G P T+ ++ LAK+ EE +
Sbjct: 305 TYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELI 364
Query: 331 EKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSH 390
+M G PD + +I + A +V EA Y + EM G PD T+N + +
Sbjct: 365 GRMISTGCLPDVSTYKDVIEGMCMAEKVDEA-YKFLDEMSNKGYPPDIVTYNCFLRVLCE 423
Query: 391 HGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLD 450
+ ++A + M + C P+VQT++ L+ F+ D + + ++K D
Sbjct: 424 NRKTDEALKLYGRMVE-SRCAPSVQTYNMLISMFFEMDDPDGAFNTWTE--MDKRDCVQD 480
Query: 451 ITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEA 510
+ TY +I+GL ++ + A L +E++ + Y+ L + + A K+
Sbjct: 481 VETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVGNLKAIHKVSE 540
Query: 511 VMKKL 515
MKK
Sbjct: 541 HMKKF 545
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/289 (20%), Positives = 114/289 (39%), Gaps = 24/289 (8%)
Query: 93 CNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSC-----------------PGYEHSSE 135
C ++ L+ ++ HR K D + +F G C G++ +
Sbjct: 247 CGLVKEGEALLRRMRHRVKPDANTFNVLF--FGWCRVRDPKKAMKLLEEMIEAGHKPENF 304
Query: 136 IYEMMVDILGKVRQMDQMRALLEEM-SKGHIV---TLNTIAKVMRRFSGAGQWEDAVRTF 191
Y +D + +D+ L + M +KG V T T A ++ + + E+
Sbjct: 305 TYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELI 364
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKI 250
+ + G + T +++ +C KV+ A E+ + PP+ T+N F+ C+
Sbjct: 365 GRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCEN 424
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
+ DEA M C P V +Y+ +I + + + EM + C +V TY
Sbjct: 425 RKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETY 484
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
+++ L +EA + E++ G K R F+ + L ++
Sbjct: 485 CAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVGNLK 533
>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 156/307 (50%), Gaps = 14/307 (4%)
Query: 178 FSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK---EGKVELARSVFLE-LKSCI 233
+ G+ A + F+ + G++ T N LL+ L + + L+++VF + +K +
Sbjct: 134 YVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIKIGV 193
Query: 234 PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
N ++FNI IHG C NR EA + +M+ +GC P I+Y+TI+ C++ ++ +
Sbjct: 194 KINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARD 253
Query: 294 LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLG 353
LL +M+ +G PN T+ ++ + G +EA + E M PD+ +N +I
Sbjct: 254 LLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFC 313
Query: 354 RASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPN 413
+ R+ EA+ + + EM ++PD T+NT+I HG E+ F ++EEM KPN
Sbjct: 314 KQGRIAEAMRLRE-EMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEG-RGMKPN 371
Query: 414 VQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS---LDITTYTLVIHGLCRANKCEWA 470
T++ ++K K GK DE +D V K S DI TY +I C+ K + A
Sbjct: 372 SVTYNVMVKWFVKKGKMDE-----VDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEA 426
Query: 471 YLLFKEM 477
+ L EM
Sbjct: 427 FRLMDEM 433
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 103/413 (24%), Positives = 202/413 (48%), Gaps = 17/413 (4%)
Query: 104 NKLIH------RFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALL 157
N LIH RF + + LG R G CP + Y ++D L K ++++ R LL
Sbjct: 201 NILIHGSCMENRFGEAIR-VLGKMRDYG-CP---PDNITYNTILDGLCKKGRLNEARDLL 255
Query: 158 EEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKE 216
+M +KG T ++ G ++A + + + + T N+++ CK+
Sbjct: 256 LDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQ 315
Query: 217 GKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISY 275
G++ A + E+++ + P+ T+N I+G + +E I+EM+G G P ++Y
Sbjct: 316 GRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTY 375
Query: 276 STIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKI 335
+ +++ + ++ +V + + +M+ GC P++VTY T++S+ K G +EA R+ ++M
Sbjct: 376 NVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGR 435
Query: 336 VGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHE 395
G K D N ++ L R ++ EA + G D ++ T+I + H
Sbjct: 436 KGLKMDDVTLNTMLRALCRERKLDEA-HDLLCSARRRGYFVDEVSYGTLIIGYFKHEKAS 494
Query: 396 KAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYT 455
+A + +EM + E P++ T++ ++ + GKT++ + +L D + + L D TY
Sbjct: 495 QALRLWDEMKEKEII-PSIITYNSMIAGLCQMGKTNQAIDKL--DELLESGLVPDEITYN 551
Query: 456 LVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+IHG C+ + E A+ +M+ + P TC +L + ++ M + A K+
Sbjct: 552 TIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKL 604
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 166/356 (46%), Gaps = 40/356 (11%)
Query: 165 IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLL--------------- 209
++T NT+ + RF + + F + G++ NT + N+L
Sbjct: 159 LLTCNTLLNALVRFPSSHSIRLSKAVFTDFIKIGVKINTNSFNILIHGSCMENRFGEAIR 218
Query: 210 --------------------LDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWC 248
LD LCK+G++ AR + L++K+ + PN TFNI + G C
Sbjct: 219 VLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCC 278
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
++ + EA I+ M + P +Y+ +I +C+Q ++ L +EM+ P+VV
Sbjct: 279 RLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVV 338
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
TY T+++ + G EE ++ E+M+ G KP+S +N ++ + ++ E + +
Sbjct: 339 TYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVR-K 397
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M E+G PD T+NT+I+ G ++AF +++EM + + K + T + +L++ +
Sbjct: 398 MEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGR-KGLKMDDVTLNTMLRALCRER 456
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
K DE L + +D +Y +I G + K A L+ EM +I P
Sbjct: 457 KLDEAHDLLCS--ARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIP 510
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 190/388 (48%), Gaps = 21/388 (5%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK----GHIVTLNTIAKVMRRFSGA---GQWEDAVR 189
Y +M+ K ++ + L EEM +VT NT+ +G G E+ +
Sbjct: 305 YNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTL------INGCFEHGSSEEGFK 358
Query: 190 TFDELGTFGLEKNTETMNLLLDTLCKEGKV-ELARSVF-LELKSCIPPNAHTFNIFIHGW 247
+E+ G++ N+ T N+++ K+GK+ E+ ++V +E C+P + T+N I
Sbjct: 359 LIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLP-DIVTYNTLISWH 417
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
CK+ ++DEA + EM G ++ +T++++ CR+ + ++LL + +G +
Sbjct: 418 CKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDE 477
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
V+Y T++ K +A+R+ ++MK P +N +I L + + +A+
Sbjct: 478 VSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLD- 536
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKT 427
E+ E+G+ PD T+NT+I + G EKAF +M + ++ KP+V T + LL K
Sbjct: 537 ELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVE-KNFKPDVVTCNTLLCGLCKE 595
Query: 428 GKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
G ++ L +L + ++K +D +Y +I LC+ + A+ L +EM + P
Sbjct: 596 GMLEKAL-KLFNTWISKGK-DVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCY 653
Query: 488 TCRLILDEVKQK-HMYDAAEKIEAVMKK 514
T IL + M DA E I + +K
Sbjct: 654 TYNAILGGLTDAGRMKDAEEFISKIAEK 681
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 99/210 (47%), Gaps = 12/210 (5%)
Query: 146 KVRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTE 204
K + Q L +EM + I+ ++ T ++ G+ A+ DEL GL +
Sbjct: 489 KHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEI 548
Query: 205 TMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
T N ++ C+EG+VE A ++ + P+ T N + G CK +++A
Sbjct: 549 TYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTW 608
Query: 264 KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSG-- 321
G +SY+TII S C++ F + ++LL+EM+ + P+ TY ++ L +G
Sbjct: 609 ISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRM 668
Query: 322 -DFEEAI-RITEKMKI------VGSKPDSR 343
D EE I +I EK K +G + D+R
Sbjct: 669 KDAEEFISKIAEKGKSENQFLELGKRQDAR 698
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 99/209 (47%), Gaps = 12/209 (5%)
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGR-----ASRVQEAVYVYQ 366
++ +Y+A G +A +I +MK +G +P N L+ L R + R+ +AV+
Sbjct: 130 SIGAYVA-CGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDF 188
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
+++ GV +T++FN +I +A VL +M C P+ T++ +L K
Sbjct: 189 IKI---GVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDY-GCPPDNITYNTILDGLCK 244
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
G+ +E LL DM NK L + TT+ +++ G CR + A + + M + + P
Sbjct: 245 KGRLNEA-RDLLLDMKNKG-LFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDA 302
Query: 487 QTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
T +++ ++ A ++ M+ L
Sbjct: 303 WTYNVMISGFCKQGRIAEAMRLREEMENL 331
>gi|15217756|ref|NP_171744.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806504|sp|Q9FZ19.2|PPR5_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g02420
gi|332189307|gb|AEE27428.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 491
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/364 (29%), Positives = 186/364 (51%), Gaps = 12/364 (3%)
Query: 87 LKQDHVCNAIQPSHYLVNKLIHRFK---DDWKSALGIFRWAGSCPGYEHSSEIYEMMVDI 143
LK+ + I S L+++++ R + + L +R+A + G+ HSS + M+ I
Sbjct: 58 LKESLSSSGIHLSKDLIDRVLKRVRFSHGNPIQTLEFYRYASAIRGFYHSSFSLDTMLYI 117
Query: 144 LGKVRQMDQMRALLEEMSKG--HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEK 201
LG+ R+ DQ+ LL E + +++ T+ V+ R + V +F + +
Sbjct: 118 LGRNRKFDQIWELLIETKRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFKRLVPDF 177
Query: 202 -NTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTI 260
+T N LL TLC+E + AR+V+ LK P+ TFNI + GW +EA+
Sbjct: 178 FDTACFNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGW---KSSEEAEAFF 234
Query: 261 QEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKS 320
+EMKG G P V++Y+++I YC+ K Y+L+D+M+ + P+V+TYTTV+ L
Sbjct: 235 EEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLI 294
Query: 321 GDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTST 380
G ++A + ++MK G PD +N I A R+ +A + EM + G++P+ +T
Sbjct: 295 GQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVD-EMVKKGLSPNATT 353
Query: 381 FNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDD 440
+N + S +++ + M E C PN Q+ L+K + K D + +L +D
Sbjct: 354 YNLFFRVLSLANDLGRSWELYVRMLGNE-CLPNTQSCMFLIKMFKRHEKVDMAM-RLWED 411
Query: 441 MVNK 444
MV K
Sbjct: 412 MVVK 415
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 88/179 (49%), Gaps = 10/179 (5%)
Query: 333 MKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
MK G KPD +N LI + +++A Y +M E PD T+ T+I G
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDREIEKA-YKLIDKMREEEETPDVITYTTVIGGLGLIG 295
Query: 393 HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS-CF--KTGKTDECLSQLLDDMVNKHHLSL 449
+KA VL+EM + C P+V ++ +++ C + G D +L+D+MV K LS
Sbjct: 296 QPDKAREVLKEMKEY-GCYPDVAAYNAAIRNFCIARRLGDAD----KLVDEMVKKG-LSP 349
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+ TTY L L AN ++ L+ M+G++ P Q+C ++ K+ D A ++
Sbjct: 350 NATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRL 408
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 98/245 (40%), Gaps = 14/245 (5%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGH----IVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++D+ K R++++ L+++M + ++T T V+ GQ + A
Sbjct: 249 YNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTT---VIGGLGLIGQPDKAREVLK 305
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKIN 251
E+ +G + N + C ++ A + E+ K + PNA T+N+F N
Sbjct: 306 EMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLAN 365
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
+ + M G+ C P S +I+ + R L ++M +G +
Sbjct: 366 DLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYSLVSD 425
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA------VYVY 365
++ L EEA + +M G +P + F + + A++ E + ++
Sbjct: 426 VLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRIKLLMELANKHDEVNNLIQKMAIF 485
Query: 366 QVEMP 370
E+P
Sbjct: 486 STEIP 490
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 181/369 (49%), Gaps = 8/369 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
G H+ Y ++++ + Q+ A+L +M K G+ + T++ ++ + + + +A
Sbjct: 725 GIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEA 784
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIH 245
V D++ G + NT T N L+ L K A ++ + K C P+ T+ + ++
Sbjct: 785 VALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGC-QPDLVTYGVVVN 843
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G CK D A + +M+ P V+ Y+TII C+ + L EM+ +G P
Sbjct: 844 GLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRP 903
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
NVVTY++++S L G + +A R+ M PD F+ LI + ++ EA +Y
Sbjct: 904 NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLY 963
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
EM + + P T++++I F H ++A + E M +HC P+V T++ L+K
Sbjct: 964 D-EMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVS-KHCFPDVVTYNTLIKGFC 1021
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
K + +E + + +++ L + TY ++I GL +A C+ A +FKEM+ + P
Sbjct: 1022 KYKRVEEGMEVFRE--MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPN 1079
Query: 486 YQTCRLILD 494
T +LD
Sbjct: 1080 IMTYNTLLD 1088
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 170/346 (49%), Gaps = 5/346 (1%)
Query: 170 TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL 229
TI ++ F + DAV D++ G + + N ++D+LCK +V A F E+
Sbjct: 260 TIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEI 319
Query: 230 -KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
+ I PN T+ ++G C +R +A + +M P VI+YS ++ ++ +
Sbjct: 320 ERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKV 379
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
+ EL +EM P++VTY+++++ L +EA ++ + M G D +N L
Sbjct: 380 LEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTL 439
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
I +A RV++ + +++ EM + G+ +T T+NT+I F G +KA +M+
Sbjct: 440 INGFCKAKRVEDGMKLFR-EMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMD-FF 497
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
P++ T++ LL G+ ++ L + +DM K + LDI TYT VI G+C+ K E
Sbjct: 498 GISPDIWTYNILLGGLCDNGELEKALV-IFEDM-QKREMDLDIVTYTTVIRGMCKTGKVE 555
Query: 469 WAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
A+ LF + + P T ++ + K + E + MK+
Sbjct: 556 EAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQ 601
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 174/363 (47%), Gaps = 41/363 (11%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
IY ++D L K + MD L +EM +KG + T + ++ G+W DA R ++
Sbjct: 872 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 931
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRV 253
+ + T + L+D KEGK+ A ++ E+ K I P+ T++ I+G+C +R+
Sbjct: 932 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 991
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCR------------------------QYNF- 288
DEA+ + M C P V++Y+T+I+ +C+ YN
Sbjct: 992 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 1051
Query: 289 ----------SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
E+ EM + G PPN++TY T++ L K+G E+A+ + E ++
Sbjct: 1052 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 1111
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
+P +N +I + +A +V++ ++ + GV PD +NTMI+ F G E+A
Sbjct: 1112 EPTIYTYNIMIEGMCKAGKVEDGWDLF-CNLSLKGVKPDVVAYNTMISGFCRKGSKEEAD 1170
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
+ +EM K + PN ++ L+++ + G E ++L+ +M + D +T LV
Sbjct: 1171 ALFKEM-KEDGTLPNSGCYNTLIRARLRDGDR-EASAELIKEM-RSCGFAGDASTIGLVT 1227
Query: 459 HGL 461
+ L
Sbjct: 1228 NML 1230
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 167/354 (47%), Gaps = 7/354 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDA 187
GY+ Y ++D L K ++++ +E+ KG + T ++ + +W DA
Sbjct: 288 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 347
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHG 246
R ++ + N T + LLD K GKV A+ +F E+ + I P+ T++ I+G
Sbjct: 348 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 407
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C +R+DEA M GC V+SY+T+I +C+ +L EM +G N
Sbjct: 408 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 467
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
VTY T++ ++GD ++A +M G PD +N L+ L +++A+ +++
Sbjct: 468 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFE 527
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
+M + + D T+ T+I G E+A+ + ++ L+ KP++ T+ ++
Sbjct: 528 -DMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLS-LKGLKPDIVTYTTMMSGLCT 585
Query: 427 TG---KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
G + + +++ + + K+ +L TL + + C +A L K++
Sbjct: 586 KGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKDI 639
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 173/358 (48%), Gaps = 6/358 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
GY+ ++ + ++ L + + AL++ M +KG L T V+ G + A
Sbjct: 795 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 854
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHG 246
+++ LE N ++D LCK ++ A ++F E+++ I PN T++ I
Sbjct: 855 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 914
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C R +A + +M +P V ++S +I ++ ++ + +L DEM + P+
Sbjct: 915 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 974
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
+VTY+++++ +EA ++ E M PD +N LI + RV+E + V++
Sbjct: 975 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 1034
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
EM + G+ +T T+N +I G + A + +EM + PN+ T++ LL K
Sbjct: 1035 -EMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS-DGVPPNIMTYNTLLDGLCK 1092
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
GK ++ + ++ + + + + I TY ++I G+C+A K E + LF + + P
Sbjct: 1093 NGKLEKAM--VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKP 1148
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 150/319 (47%), Gaps = 15/319 (4%)
Query: 35 IVSSSPIESYCSDGARLDHHQVLC--VDSPRLPDIDVIISKVHVGSSEDEVFQS--LKQD 90
+ SS I C+ G D ++L ++ PD+ + + E ++ ++ L +
Sbjct: 906 VTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDE 965
Query: 91 HVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVR 148
V +I PS + LI+ F D A +F + S + Y ++ K +
Sbjct: 966 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVV-TYNTLIKGFCKYK 1024
Query: 149 QMDQMRALLEEMSK----GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTE 204
++++ + EMS+ G+ VT N + + + + AG + A F E+ + G+ N
Sbjct: 1025 RVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ---AGDCDMAQEIFKEMVSDGVPPNIM 1081
Query: 205 TMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
T N LLD LCK GK+E A VF L +S + P +T+NI I G CK +V++ +
Sbjct: 1082 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNL 1141
Query: 264 KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF 323
G P V++Y+T+I +CR+ + + L EM+ G PN Y T++ + GD
Sbjct: 1142 SLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDR 1201
Query: 324 EEAIRITEKMKIVGSKPDS 342
E + + ++M+ G D+
Sbjct: 1202 EASAELIKEMRSCGFAGDA 1220
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 145/303 (47%), Gaps = 10/303 (3%)
Query: 216 EGKVELARSVFLELKSCIP-PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVIS 274
E K++ A ++F E+ P P+ F+ + K+N+ D ++M+ G +
Sbjct: 673 ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYT 732
Query: 275 YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
YS +I +CR+ +L +M G PN+VT +++++ S EA+ + ++M
Sbjct: 733 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 792
Query: 335 IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHH 394
+ G +P++ FN LI+ L ++ EA+ + M G PD T+ ++ G
Sbjct: 793 VTGYQPNTVTFNTLIHGLFLHNKASEAMALID-RMVAKGCQPDLVTYGVVVNGLCKRGDT 851
Query: 395 EKAFHVLEEMNKLEHCK--PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
+ AF++L NK+E K P V ++ ++ K D+ L+ L +M K + ++
Sbjct: 852 DLAFNLL---NKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALN-LFKEMETK-GIRPNVV 906
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE-VKQKHMYDAAEKIEAV 511
TY+ +I LC + A L +MI I P T ++D VK+ + +A + + +
Sbjct: 907 TYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM 966
Query: 512 MKK 514
+K+
Sbjct: 967 VKR 969
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 132/271 (48%), Gaps = 5/271 (1%)
Query: 209 LLDTLCKEGKVELARSVFLELKSCIP-PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG 267
L T ++ K+ A +F ++ P P+ FN + K+ + D ++M+ G
Sbjct: 159 LSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLG 218
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
+ +++ +I +C + S +L +M G P+ VT ++++ + +A+
Sbjct: 219 IRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 278
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITM 387
+ +KM +G KPD +N +I +L + RV +A ++ E+ G+ P+ T+ ++
Sbjct: 279 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFK-EIERKGIRPNVVTYTALVNG 337
Query: 388 FSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHL 447
+ A +L +M K + PNV T+ LL + K GK E +L ++MV + +
Sbjct: 338 LCNSSRWSDAARLLSDMIK-KKITPNVITYSALLDAFVKNGKVLEA-KELFEEMV-RMSI 394
Query: 448 SLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
DI TY+ +I+GLC ++ + A +F M+
Sbjct: 395 DPDIVTYSSLINGLCLHDRIDEANQMFDLMV 425
>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g31850, chloroplastic; AltName: Full=Protein PROTON
GRADIENT REGULATION 3; Flags: Precursor
gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
Length = 1112
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 176/406 (43%), Gaps = 47/406 (11%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQW 184
G+ S + Y ++ LGK R +D + LL+EM K ++ T +V+ R AG+
Sbjct: 218 GFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGR---AGKI 274
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCI----------- 233
+A + G + T +L+D LC K++ A+ VF ++K+
Sbjct: 275 NEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITL 334
Query: 234 -------------------------PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGC 268
P+ TF I + CK EA T+ M+ G
Sbjct: 335 LDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGI 394
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
P + +Y+T+I R + EL M++ G P TY + Y KSGD A+
Sbjct: 395 LPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALE 454
Query: 329 ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF 388
EKMK G P+ N +Y+L +A R +EA ++ + + G+ PD+ T+N M+ +
Sbjct: 455 TFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFY-GLKDIGLVPDSVTYNMMMKCY 513
Query: 389 SHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
S G ++A +L EM + C+P+V + L+ + +K + DE + + + L
Sbjct: 514 SKVGEIDEAIKLLSEMME-NGCEPDVIVVNSLINTLYKADRVDEAWKMFM--RMKEMKLK 570
Query: 449 LDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
+ TY ++ GL + K + A LF+ M+ P T + D
Sbjct: 571 PTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFD 616
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 150/299 (50%), Gaps = 8/299 (2%)
Query: 214 CKEGKVELARSVFLELKS--CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPC 271
CK V AR++F + + P T+N+ I G + + ++ AQ ++K GC P
Sbjct: 760 CKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPD 819
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI-T 330
V +Y+ ++ +Y + +++EL EM C N +T+ V+S L K+G+ ++A+ +
Sbjct: 820 VATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYY 879
Query: 331 EKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSH 390
+ M P + + LI L ++ R+ EA +++ M + G P+ + +N +I F
Sbjct: 880 DLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFE-GMLDYGCRPNCAIYNILINGFGK 938
Query: 391 HGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLD 450
G + A + + M K E +P+++T+ L+ G+ DE L + + + L+ D
Sbjct: 939 AGEADAACALFKRMVK-EGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKE--LKESGLNPD 995
Query: 451 ITTYTLVIHGLCRANKCEWAYLLFKEM-IGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+ Y L+I+GL ++++ E A +LF EM ITP T ++ + M + A KI
Sbjct: 996 VVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKI 1054
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 140/293 (47%), Gaps = 7/293 (2%)
Query: 143 ILGKVRQMDQMR----ALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
++G + + D + L+ S G I + T ++ + +G+ ++ + E+ T
Sbjct: 791 LIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHE 850
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLELKSC--IPPNAHTFNIFIHGWCKINRVDEA 256
E NT T N+++ L K G V+ A ++ +L S P A T+ I G K R+ EA
Sbjct: 851 CEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEA 910
Query: 257 QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSY 316
+ + M +GC P Y+ +I + + L M +G P++ TY+ ++
Sbjct: 911 KQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDC 970
Query: 317 LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
L G +E + +++K G PD +N +I LG++ R++EA+ ++ G+ P
Sbjct: 971 LCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITP 1030
Query: 377 DTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
D T+N++I G E+A + E+ + +PNV TF+ L++ +GK
Sbjct: 1031 DLYTYNSLILNLGIAGMVEEAGKIYNEIQR-AGLEPNVFTFNALIRGYSLSGK 1082
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 140/295 (47%), Gaps = 7/295 (2%)
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS--CIPPNAHTFNIFIHGWCKINRVD 254
G++ T NLL+ L + +E+A+ VFL++KS CI P+ T+N + + K ++D
Sbjct: 779 LGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCI-PDVATYNFLLDAYGKSGKID 837
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYEL-LDEMQAQGCPPNVVTYTTV 313
E +EM H C I+++ +I + N +L D M + P TY +
Sbjct: 838 ELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPL 897
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
+ L+KSG EA ++ E M G +P+ +N LI G+A A +++ M + G
Sbjct: 898 IDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFK-RMVKEG 956
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
V PD T++ ++ G ++ H +E+ K P+V ++ ++ K+ + +E
Sbjct: 957 VRPDLKTYSVLVDCLCMVGRVDEGLHYFKEL-KESGLNPDVVCYNLIINGLGKSHRLEEA 1015
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
L L ++M ++ D+ TY +I L A E A ++ E+ + P T
Sbjct: 1016 LV-LFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFT 1069
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 150/340 (44%), Gaps = 9/340 (2%)
Query: 154 RALLEEMSK--GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLD 211
R L E+ +K G L T ++ A E A F ++ + G + T N LLD
Sbjct: 769 RTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLD 828
Query: 212 TLCKEGKVELARSVFLELKS--CIPPNAHTFNIFIHGWCKINRVDEA-QWTIQEMKGHGC 268
K GK++ ++ E+ + C N T NI I G K VD+A M
Sbjct: 829 AYGKSGKIDELFELYKEMSTHEC-EANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDF 887
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
P +Y +I + + +L + M GC PN Y +++ K+G+ + A
Sbjct: 888 SPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACA 947
Query: 329 ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF 388
+ ++M G +PD + ++ L+ L RV E ++ ++ E+ E+G+ PD +N +I
Sbjct: 948 LFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFK-ELKESGLNPDVVCYNLIINGL 1006
Query: 389 SHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
E+A + EM P++ T++ L+ + G +E + + + + + L
Sbjct: 1007 GKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEE--AGKIYNEIQRAGLE 1064
Query: 449 LDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
++ T+ +I G + K E AY +++ M+ +P T
Sbjct: 1065 PNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGT 1104
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 105/431 (24%), Positives = 196/431 (45%), Gaps = 33/431 (7%)
Query: 95 AIQPSHYLVNKLI------HRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVR 148
I P+ + N LI HR D AL +F S G + ++ Y + +D GK
Sbjct: 393 GILPNLHTYNTLICGLLRVHRLDD----ALELFGNMESL-GVKPTAYTYIVFIDYYGK-- 445
Query: 149 QMDQMRAL--LEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTET 205
D + AL E+M +KG + + + AG+ +A + F L GL ++ T
Sbjct: 446 SGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVT 505
Query: 206 MNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
N+++ K G+++ A + E+ ++ P+ N I+ K +RVDEA MK
Sbjct: 506 YNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMK 565
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
P V++Y+T++ + + EL + M +GCPPN +T+ T+ L K+ +
Sbjct: 566 EMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVT 625
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV-YVYQVEMPENGVAPDTSTFNT 383
A+++ KM +G PD +N +I+ L + +V+EA+ + +Q++ V PD T T
Sbjct: 626 LALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL---VYPDFVTLCT 682
Query: 384 MITMFSHHGHHEKAFHVLEEMNKLEHC--KPNVQTFHPLLKSCFKTGKTDECLS---QLL 438
++ E A+ ++ N L +C +P + L+ S D +S +L+
Sbjct: 683 LLPGVVKASLIEDAYKIIT--NFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLV 740
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH-DITPRYQTCRLILDEVK 497
+ + + S+ + +I C+ N A LF++ + P+ T L++ +
Sbjct: 741 ANGICRDGDSILVP----IIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLL 796
Query: 498 QKHMYDAAEKI 508
+ M + A+ +
Sbjct: 797 EADMIEIAQDV 807
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 145/322 (45%), Gaps = 5/322 (1%)
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRV 253
G L TET N +L+ L +GK+E VF L K I + +T+ +
Sbjct: 110 GNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGL 169
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
+A + +++M+ G SY+ +I + ++ E+ M +G P++ TY+++
Sbjct: 170 KQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSL 229
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
M L K D + + + ++M+ +G KP+ F I LGRA ++ EA + + M + G
Sbjct: 230 MVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILK-RMDDEG 288
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
PD T+ +I + A V E+M H KP+ T+ LL F + +
Sbjct: 289 CGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRH-KPDRVTYITLLDR-FSDNRDLDS 346
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
+ Q +M H+ D+ T+T+++ LC+A A+ M I P T ++
Sbjct: 347 VKQFWSEMEKDGHVP-DVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLI 405
Query: 494 DEVKQKHMYDAAEKIEAVMKKL 515
+ + H D A ++ M+ L
Sbjct: 406 CGLLRVHRLDDALELFGNMESL 427
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 142/314 (45%), Gaps = 5/314 (1%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTF 240
G+ E+ FD + ++++T T + +L +G ++ A +++ NA+++
Sbjct: 132 GKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSY 191
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
N IH K EA + M G P + +YS+++ ++ + V LL EM+
Sbjct: 192 NGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMET 251
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
G PNV T+T + L ++G EA I ++M G PD + LI L A ++
Sbjct: 252 LGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDC 311
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
A V++ +M PD T+ T++ FS + + EM K H P+V TF L
Sbjct: 312 AKEVFE-KMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHV-PDVVTFTIL 369
Query: 421 LKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH 480
+ + K G E L D++ + ++ TY +I GL R ++ + A LF M
Sbjct: 370 VDALCKAGNFGEAFDTL--DVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESL 427
Query: 481 DITPRYQTCRLILD 494
+ P T + +D
Sbjct: 428 GVKPTAYTYIVFID 441
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 112/217 (51%), Gaps = 3/217 (1%)
Query: 170 TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL 229
T ++ S +G+ +A + F+ + +G N N+L++ K G+ + A ++F +
Sbjct: 893 TYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRM 952
Query: 230 -KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
K + P+ T+++ + C + RVDE +E+K G +P V+ Y+ II + +
Sbjct: 953 VKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRL 1012
Query: 289 SKVYELLDEMQ-AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNC 347
+ L +EM+ ++G P++ TY +++ L +G EEA +I +++ G +P+ FN
Sbjct: 1013 EEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNA 1072
Query: 348 LIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTM 384
LI + + + A VYQ M G +P+T T+ +
Sbjct: 1073 LIRGYSLSGKPEHAYAVYQT-MVTGGFSPNTGTYEQL 1108
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 82/178 (46%), Gaps = 3/178 (1%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
IY ++++ GK + D AL + M K G L T + ++ G+ ++ + F EL
Sbjct: 928 IYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKEL 987
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC--IPPNAHTFNIFIHGWCKINR 252
GL + NL+++ L K ++E A +F E+K+ I P+ +T+N I
Sbjct: 988 KESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGM 1047
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
V+EA E++ G P V +++ +I+ Y Y + M G PN TY
Sbjct: 1048 VEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105
>gi|302766812|ref|XP_002966826.1| hypothetical protein SELMODRAFT_11024 [Selaginella moellendorffii]
gi|300164817|gb|EFJ31425.1| hypothetical protein SELMODRAFT_11024 [Selaginella moellendorffii]
Length = 484
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 184/381 (48%), Gaps = 19/381 (4%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIA--KVMRRFSGAGQWED 186
G+ S E Y + + + ++M + + LL++M + + +++ V+ + GQ E+
Sbjct: 46 GHRPSVECYTVAIAEVVAEKKMSEAQQLLKQMEEEDGLAPDSVCFNTVINGWCNEGQMEE 105
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--------------KSC 232
A+R E+ T T N L+ G+ E A+ + L L +
Sbjct: 106 AMRVVQEMRQKNCRPTTSTYNTLIKGYGVAGQAEQAQQLVLHLLNKTRNSPSSEDGLEPV 165
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
PN T N ++ WC+ R++EA + +K G P ++Y+T+ ++Y +++
Sbjct: 166 ARPNLRTMNTLLNAWCREGRLEEAWRVVAMIKSAGMQPDAVTYNTLAKAYAAAGRVAELE 225
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
+L+ +M+ PN+ TY ++S ++G E +++ ++K G PD FN L+
Sbjct: 226 DLIADMKNARLKPNLRTYAILISCYCQNGMPERGLQLLSRLKFEGLHPDVVAFNTLLKGY 285
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
+ + Q + + M NGV PD +T++T++ +S G +KA +L EM + + KP
Sbjct: 286 SQENDQQLKLEMVLDLMAANGVRPDVTTYSTIMNWWSSAGMADKAQTILLEMQQ-DRVKP 344
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
+V+ F L K ++G+T E S LL DM + H ++ ++ YT +I G C + + A
Sbjct: 345 DVRAFAILAKGYVRSGRTHEAES-LLQDM-SLHGVAPNVVVYTTIISGWCSMGRMDDALR 402
Query: 473 LFKEMIGHDITPRYQTCRLIL 493
+ + M+ P T + ++
Sbjct: 403 VLELMLERGEAPNLNTVQTLV 423
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 181/369 (49%), Gaps = 8/369 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
G H+ Y ++++ + Q+ A+L +M K G+ + T++ ++ + + + +A
Sbjct: 111 GIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEA 170
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIH 245
V D++ G + NT T N L+ L K A ++ + K C P+ T+ + ++
Sbjct: 171 VALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGC-QPDLVTYGVVVN 229
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G CK D A + +M+ P V+ Y+TII C+ + L EM+ +G P
Sbjct: 230 GLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRP 289
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
NVVTY++++S L G + +A R+ M PD F+ LI + ++ EA +Y
Sbjct: 290 NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLY 349
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
EM + + P T++++I F H ++A + E M +HC P+V T++ L+K
Sbjct: 350 D-EMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVS-KHCFPDVVTYNTLIKGFC 407
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
K + +E + + +++ L + TY ++I GL +A C+ A +FKEM+ + P
Sbjct: 408 KYKRVEEGMEVFRE--MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPN 465
Query: 486 YQTCRLILD 494
T +LD
Sbjct: 466 IMTYNTLLD 474
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 166/343 (48%), Gaps = 40/343 (11%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
IY ++D L K + MD L +EM +KG + T + ++ G+W DA R ++
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 317
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRV 253
+ + T + L+D KEGK+ A ++ E+ K I P+ T++ I+G+C +R+
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCR------------------------QYNF- 288
DEA+ + M C P V++Y+T+I+ +C+ YN
Sbjct: 378 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 437
Query: 289 ----------SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
E+ EM + G PPN++TY T++ L K+G E+A+ + E ++
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
+P +N +I + +A +V++ ++ + GV PD +NTMI+ F G E+A
Sbjct: 498 EPTIYTYNIMIEGMCKAGKVEDGWDLF-CNLSLKGVKPDVVAYNTMISGFCRKGSKEEAD 556
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDM 441
+ +EM K + PN ++ L+++ + G E ++L+ +M
Sbjct: 557 ALFKEM-KEDGTLPNSGCYNTLIRARLRDGDR-EASAELIKEM 597
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 173/358 (48%), Gaps = 6/358 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
GY+ ++ + ++ L + + AL++ M +KG L T V+ G + A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHG 246
+++ LE N ++D LCK ++ A ++F E+++ I PN T++ I
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C R +A + +M +P V ++S +I ++ ++ + +L DEM + P+
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
+VTY+++++ +EA ++ E M PD +N LI + RV+E + V++
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 420
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
EM + G+ +T T+N +I G + A + +EM + PN+ T++ LL K
Sbjct: 421 -EMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS-DGVPPNIMTYNTLLDGLCK 478
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
GK ++ + ++ + + + + I TY ++I G+C+A K E + LF + + P
Sbjct: 479 NGKLEKAM--VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKP 534
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 150/319 (47%), Gaps = 15/319 (4%)
Query: 35 IVSSSPIESYCSDGARLDHHQVLC--VDSPRLPDIDVIISKVHVGSSEDEVFQS--LKQD 90
+ SS I C+ G D ++L ++ PD+ + + E ++ ++ L +
Sbjct: 292 VTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDE 351
Query: 91 HVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVR 148
V +I PS + LI+ F D A +F + S + Y ++ K +
Sbjct: 352 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVV-TYNTLIKGFCKYK 410
Query: 149 QMDQMRALLEEMSK----GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTE 204
++++ + EMS+ G+ VT N + + + + AG + A F E+ + G+ N
Sbjct: 411 RVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ---AGDCDMAQEIFKEMVSDGVPPNIM 467
Query: 205 TMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
T N LLD LCK GK+E A VF L +S + P +T+NI I G CK +V++ +
Sbjct: 468 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNL 527
Query: 264 KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF 323
G P V++Y+T+I +CR+ + + L EM+ G PN Y T++ + GD
Sbjct: 528 SLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDR 587
Query: 324 EEAIRITEKMKIVGSKPDS 342
E + + ++M+ G D+
Sbjct: 588 EASAELIKEMRSCGFAGDA 606
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 145/303 (47%), Gaps = 10/303 (3%)
Query: 216 EGKVELARSVFLELKSCIP-PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVIS 274
E K++ A ++F E+ P P+ F+ + K+N+ D ++M+ G +
Sbjct: 59 ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYT 118
Query: 275 YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
YS +I +CR+ +L +M G PN+VT +++++ S EA+ + ++M
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178
Query: 335 IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHH 394
+ G +P++ FN LI+ L ++ EA+ + M G PD T+ ++ G
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAMALID-RMVAKGCQPDLVTYGVVVNGLCKRGDT 237
Query: 395 EKAFHVLEEMNKLEHCK--PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
+ AF++L NK+E K P V ++ ++ K D+ L+ L +M K + ++
Sbjct: 238 DLAFNLL---NKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALN-LFKEMETK-GIRPNVV 292
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE-VKQKHMYDAAEKIEAV 511
TY+ +I LC + A L +MI I P T ++D VK+ + +A + + +
Sbjct: 293 TYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 512 MKK 514
+K+
Sbjct: 353 VKR 355
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 94/195 (48%), Gaps = 10/195 (5%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKG---HIVTLNTIAKVMRRFSGAGQW 184
G ++ Y +++ L + D + + +EM S G +I+T NT+ + G+
Sbjct: 426 GLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL---LDGLCKNGKL 482
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNI 242
E A+ F+ L +E T N++++ +CK GKVE +F L LK + P+ +N
Sbjct: 483 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG-VKPDVVAYNT 541
Query: 243 FIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
I G+C+ +EA +EMK G P Y+T+I++ R + EL+ EM++ G
Sbjct: 542 MISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 601
Query: 303 CPPNVVTYTTVMSYL 317
+ T V + L
Sbjct: 602 FAGDASTIGLVTNML 616
>gi|224083253|ref|XP_002306972.1| predicted protein [Populus trichocarpa]
gi|222856421|gb|EEE93968.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 150/309 (48%), Gaps = 4/309 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDA 187
G + + Y ++D G + + R +L+EM ++ ++++ + G+W+ +
Sbjct: 370 GVSPNEQTYSFLIDAYGNAGRWESARIVLKEMEASNVQPNAYVFSRILSSYRDKGEWQKS 429
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHG 246
+ E+ G+ + N+++DT K ++ A + F L I P+ T+N I
Sbjct: 430 FQVLREMENSGVRPDRVFYNVMIDTFGKFNCLDHAMATFDRMLSEGIEPDTVTWNTLIDC 489
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C+ + D A+ +EM G PC +++ +I S+ Q + V LL M++QG PN
Sbjct: 490 HCRAGKHDRAEELFEEMMEGGYSPCNTTFNIMINSFGDQERWDDVKNLLAHMRSQGLVPN 549
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
VTYTT++ KSG F +AI + MK G KP S +N LI + ++AV ++
Sbjct: 550 SVTYTTLIDIYGKSGRFNDAIECLDDMKAAGLKPSSTMYNALINAYAQRGLSEQAVSAFR 609
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
M +G+ P N++I F +AF VL+ M K KP+V T+ L+K+ +
Sbjct: 610 A-MRVDGLKPSLLALNSLINAFGEDRRDAEAFTVLQYM-KENDLKPDVVTYTTLMKALIR 667
Query: 427 TGKTDECLS 435
K D+ S
Sbjct: 668 VEKFDKVPS 676
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 150/342 (43%), Gaps = 38/342 (11%)
Query: 178 FSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPN 236
F+ AG A+ + GL T T+ ++ L G+ A ++F E++ + + P
Sbjct: 280 FAKAGDLSKALEFLGVVQGSGLSVKTATLVAVIWALGNCGRTVEAEAIFEEMRDNGLKPR 339
Query: 237 AHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLD 296
+N + G+ K + +A++ + EM+ G P +YS +I +Y + +L
Sbjct: 340 TRAYNALLRGYVKAGLLKDAEFVVSEMERSGVSPNEQTYSFLIDAYGNAGRWESARIVLK 399
Query: 297 EMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRAS 356
EM+A PN ++ ++S G+++++ ++ +M+ G +PD F+N +I T G+ +
Sbjct: 400 EMEASNVQPNAYVFSRILSSYRDKGEWQKSFQVLREMENSGVRPDRVFYNVMIDTFGKFN 459
Query: 357 RVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM------------ 404
+ A+ + M G+ PDT T+NT+I G H++A + EEM
Sbjct: 460 CLDHAMATFD-RMLSEGIEPDTVTWNTLIDCHCRAGKHDRAEELFEEMMEGGYSPCNTTF 518
Query: 405 -----------------NKLEHCK-----PNVQTFHPLLKSCFKTGKTDECLSQLLDDMV 442
N L H + PN T+ L+ K+G+ ++ + + LDDM
Sbjct: 519 NIMINSFGDQERWDDVKNLLAHMRSQGLVPNSVTYTTLIDIYGKSGRFNDAI-ECLDDM- 576
Query: 443 NKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
L T Y +I+ + E A F+ M + P
Sbjct: 577 KAAGLKPSSTMYNALINAYAQRGLSEQAVSAFRAMRVDGLKP 618
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 147/350 (42%), Gaps = 50/350 (14%)
Query: 87 LKQDHVCNAIQPSHYLVNKLIHRFKD--DWKSALGIFRWAGSCPGYEHSSEIYEMMVDIL 144
LK+ N +QP+ Y+ ++++ ++D +W+ + + R + G Y +M+D
Sbjct: 398 LKEMEASN-VQPNAYVFSRILSSYRDKGEWQKSFQVLREMENS-GVRPDRVFYNVMIDTF 455
Query: 145 GKVRQMDQMRALLEEM-SKG---HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLE 200
GK +D A + M S+G VT NT+ R AG+ + A F+E+ G
Sbjct: 456 GKFNCLDHAMATFDRMLSEGIEPDTVTWNTLIDCHCR---AGKHDRAEELFEEMMEGGYS 512
Query: 201 KNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWT 259
T N+++++ + + + +++ ++S + PN+ T+ I + K R ++A
Sbjct: 513 PCNTTFNIMINSFGDQERWDDVKNLLAHMRSQGLVPNSVTYTTLIDIYGKSGRFNDAIEC 572
Query: 260 IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK 319
+ +MK G P Y+ +I +Y A+
Sbjct: 573 LDDMKAAGLKPSSTMYNALINAY-----------------------------------AQ 597
Query: 320 SGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTS 379
G E+A+ M++ G KP N LI G R EA V Q M EN + PD
Sbjct: 598 RGLSEQAVSAFRAMRVDGLKPSLLALNSLINAFGEDRRDAEAFTVLQY-MKENDLKPDVV 656
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
T+ T++ +K V EEM L C P+ + +L+S K K
Sbjct: 657 TYTTLMKALIRVEKFDKVPSVYEEM-ILSGCTPDRKA-RAMLRSALKYMK 704
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 145/345 (42%), Gaps = 38/345 (11%)
Query: 205 TMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEA--QWTIQ 261
T N L+ + +E A ++ ++ P + +++ I + NRVD A Q +
Sbjct: 200 TYNALISACARNNDLEKALNLITRMRQDGYPSDFVNYSLIIRSLMRKNRVDSAILQKLYR 259
Query: 262 EMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSG 321
E++ V + II + + + SK E L +Q G T V+ L G
Sbjct: 260 EIECDKLELDVQLSNDIIVGFAKAGDLSKALEFLGVVQGSGLSVKTATLVAVIWALGNCG 319
Query: 322 DFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTF 381
EA I E+M+ G KP +R +N L+ +A +++A +V EM +GV+P+ T+
Sbjct: 320 RTVEAEAIFEEMRDNGLKPRTRAYNALLRGYVKAGLLKDAEFVVS-EMERSGVSPNEQTY 378
Query: 382 NTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG------------- 428
+ +I + + G E A VL+EM + + +PN F +L S G
Sbjct: 379 SFLIDAYGNAGRWESARIVLKEM-EASNVQPNAYVFSRILSSYRDKGEWQKSFQVLREME 437
Query: 429 ----KTDECLSQLLDDMVNKHH----------------LSLDITTYTLVIHGLCRANKCE 468
+ D ++ D K + + D T+ +I CRA K +
Sbjct: 438 NSGVRPDRVFYNVMIDTFGKFNCLDHAMATFDRMLSEGIEPDTVTWNTLIDCHCRAGKHD 497
Query: 469 WAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
A LF+EM+ +P T ++++ + +D + + A M+
Sbjct: 498 RAEELFEEMMEGGYSPCNTTFNIMINSFGDQERWDDVKNLLAHMR 542
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 110/268 (41%), Gaps = 44/268 (16%)
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
C + YS +I + + K+YE Q Q P +TY ++S A++ D E+A+
Sbjct: 164 CFSYELLYSILIHALGQS---EKLYEAFLLSQRQNLTP--LTYNALISACARNNDLEKAL 218
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY--VYQ----------VEMPEN--- 372
+ +M+ G D ++ +I +L R +RV A+ +Y+ V++ +
Sbjct: 219 NLITRMRQDGYPSDFVNYSLIIRSLMRKNRVDSAILQKLYREIECDKLELDVQLSNDIIV 278
Query: 373 ---------------------GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCK 411
G++ T+T +I + G +A + EEM K
Sbjct: 279 GFAKAGDLSKALEFLGVVQGSGLSVKTATLVAVIWALGNCGRTVEAEAIFEEMRD-NGLK 337
Query: 412 PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAY 471
P + ++ LL+ K G + ++ + + + +S + TY+ +I A + E A
Sbjct: 338 PRTRAYNALLRGYVKAGLLKD--AEFVVSEMERSGVSPNEQTYSFLIDAYGNAGRWESAR 395
Query: 472 LLFKEMIGHDITPRYQTCRLILDEVKQK 499
++ KEM ++ P IL + K
Sbjct: 396 IVLKEMEASNVQPNAYVFSRILSSYRDK 423
>gi|255660886|gb|ACU25612.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
Length = 484
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 193/388 (49%), Gaps = 14/388 (3%)
Query: 100 HYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEE 159
H LV ++H K + AL FRW +EH+ E + +++ILG+ +++ R +L +
Sbjct: 12 HELVYNVLHSSKTS-EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLD 70
Query: 160 M-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
M KG + ++ + G +++V+ F ++ G+E+ ++ N L + + G+
Sbjct: 71 MPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGR 130
Query: 219 VELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
+A+ F + L I P HTFN+ I G+ +V+ A ++MK P V++Y+T
Sbjct: 131 YMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNT 190
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+I Y R + + EM+ + P VVTYTT++ ++A+R+ E+MK G
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFG 250
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP-DTSTFNTMITMFSHHGHHEK 396
KP++ ++ L+ L A ++ EA + + EM + +AP D S F +I+ G+ +
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMSEARVILK-EMMDKYLAPTDNSIFMRLISSHCKSGNLDA 309
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK-------HHLSL 449
A VL+ M +L + L+++ K G+ D+ + +LLD ++ K L L
Sbjct: 310 AADVLKAMIRLS-VPTEAGHYGXLIENFCKXGQYDKAV-KLLDKLIEKDIILRPQSTLHL 367
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEM 477
+ + Y +I LC + A L +++
Sbjct: 368 EPSAYNPMIEYLCNNGQXXKAETLVRQL 395
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 133/311 (42%), Gaps = 4/311 (1%)
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQ 257
E N ET +++ L + K+ AR + L++ K + + + + I + K V E+
Sbjct: 41 FEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESV 100
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
Q+M+ G + SY+ + + R+ + ++M ++G P T+ ++
Sbjct: 101 KMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGF 160
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
SG E A R E MK PD +N +I R +++EA Y VEM + P
Sbjct: 161 FLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEK-YFVEMKGRNIEPT 219
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
T+ T+I + + A ++EEM KPN T+ LL K E +
Sbjct: 220 VVTYTTLIKGYVSVDQVDDALRLVEEMKGF-GIKPNAITYSTLLPGLCNAEKMSEA-RVI 277
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVK 497
L +M++K+ D + + +I C++ + A + K MI + +++
Sbjct: 278 LKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGXLIENFC 337
Query: 498 QKHMYDAAEKI 508
+ YD A K+
Sbjct: 338 KXGQYDKAVKL 348
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 127/267 (47%), Gaps = 6/267 (2%)
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
+ ++++ A+ + +M G + +I SY ++ + ++ +M+ G +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIK 116
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
+Y + + + G + A R KM G +P FN +I+ + +V+ A ++ +
Sbjct: 117 SYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFE-D 175
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M ++PD T+NTMI + E+A EM K + +P V T+ L+K
Sbjct: 176 MKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEM-KGRNIEPTVVTYTTLIKGYVSVD 234
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ D+ L +L+++M + + TY+ ++ GLC A K A ++ KEM+ + P +
Sbjct: 235 QVDDAL-RLVEEM-KGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNS 292
Query: 489 C--RLILDEVKQKHMYDAAEKIEAVMK 513
RLI K ++ AA+ ++A+++
Sbjct: 293 IFMRLISSHCKSGNLDAAADVLKAMIR 319
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 5/205 (2%)
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N T+ ++ L ++ A I M G + D + +I + G+ VQE+V ++
Sbjct: 44 NRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMF 103
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
Q +M E GV ++N + + G + A +M E +P TF+ ++ F
Sbjct: 104 Q-KMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLS-EGIEPTRHTFNVMIWGFF 161
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
+GK E ++ +DM ++ +S D+ TY +I+G R K E A F EM G +I P
Sbjct: 162 LSGKV-ETANRFFEDMKSRE-ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPT 219
Query: 486 YQT-CRLILDEVKQKHMYDAAEKIE 509
T LI V + DA +E
Sbjct: 220 VVTYTTLIKGYVSVDQVDDALRLVE 244
>gi|9857539|gb|AAG00894.1|AC064879_12 Hypothetical protein [Arabidopsis thaliana]
Length = 490
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/364 (29%), Positives = 186/364 (51%), Gaps = 12/364 (3%)
Query: 87 LKQDHVCNAIQPSHYLVNKLIHRFK---DDWKSALGIFRWAGSCPGYEHSSEIYEMMVDI 143
LK+ + I S L+++++ R + + L +R+A + G+ HSS + M+ I
Sbjct: 57 LKESLSSSGIHLSKDLIDRVLKRVRFSHGNPIQTLEFYRYASAIRGFYHSSFSLDTMLYI 116
Query: 144 LGKVRQMDQMRALLEEMSKG--HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEK 201
LG+ R+ DQ+ LL E + +++ T+ V+ R + V +F + +
Sbjct: 117 LGRNRKFDQIWELLIETKRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFKRLVPDF 176
Query: 202 -NTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTI 260
+T N LL TLC+E + AR+V+ LK P+ TFNI + GW +EA+
Sbjct: 177 FDTACFNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGW---KSSEEAEAFF 233
Query: 261 QEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKS 320
+EMKG G P V++Y+++I YC+ K Y+L+D+M+ + P+V+TYTTV+ L
Sbjct: 234 EEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLI 293
Query: 321 GDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTST 380
G ++A + ++MK G PD +N I A R+ +A + EM + G++P+ +T
Sbjct: 294 GQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVD-EMVKKGLSPNATT 352
Query: 381 FNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDD 440
+N + S +++ + M E C PN Q+ L+K + K D + +L +D
Sbjct: 353 YNLFFRVLSLANDLGRSWELYVRMLGNE-CLPNTQSCMFLIKMFKRHEKVDMAM-RLWED 410
Query: 441 MVNK 444
MV K
Sbjct: 411 MVVK 414
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 10/179 (5%)
Query: 333 MKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
MK G KPD +N LI + +++A Y +M E PD T+ T+I G
Sbjct: 236 MKGKGLKPDVVTYNSLIDVYCKDREIEKA-YKLIDKMREEEETPDVITYTTVIGGLGLIG 294
Query: 393 HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS---CFKTGKTDECLSQLLDDMVNKHHLSL 449
+KA VL+EM + C P+V ++ +++ + G D +L+D+MV K LS
Sbjct: 295 QPDKAREVLKEMKEY-GCYPDVAAYNAAIRNFCIARRLGDAD----KLVDEMVKKG-LSP 348
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+ TTY L L AN ++ L+ M+G++ P Q+C ++ K+ D A ++
Sbjct: 349 NATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRL 407
Score = 42.4 bits (98), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 98/245 (40%), Gaps = 14/245 (5%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGH----IVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++D+ K R++++ L+++M + ++T T V+ GQ + A
Sbjct: 248 YNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTT---VIGGLGLIGQPDKAREVLK 304
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKIN 251
E+ +G + N + C ++ A + E+ K + PNA T+N+F N
Sbjct: 305 EMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLAN 364
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
+ + M G+ C P S +I+ + R L ++M +G +
Sbjct: 365 DLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYSLVSD 424
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA------VYVY 365
++ L EEA + +M G +P + F + + A++ E + ++
Sbjct: 425 VLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRIKLLMELANKHDEVNNLIQKMAIF 484
Query: 366 QVEMP 370
E+P
Sbjct: 485 STEIP 489
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 184/385 (47%), Gaps = 10/385 (2%)
Query: 95 AIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMR 154
A+QP H + R+++D +AL +F + G++H+ E Y+ M++ LG + + M
Sbjct: 4 ALQPKHVAA---VIRYQNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAME 60
Query: 155 ALLEEMSKGHIVTL--NTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDT 212
+L EM K + +MR + G+ ++AV F+ + + E + ++ N +++
Sbjct: 61 DVLAEMRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNI 120
Query: 213 LCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPC 271
L + G A V++ +K I P+ +T I + +C R A + M G GC
Sbjct: 121 LVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFN 180
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
+SY +I + ++ + Y L DEM QG P+++T+ ++ L K G+ +E+ ++
Sbjct: 181 AVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFS 240
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHH 391
K+ G P+ FN I L R + EA + + + E G+ PD ++NT+I F H
Sbjct: 241 KVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSE-GLTPDVISYNTLICGFCKH 299
Query: 392 GHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDI 451
+A L +M +PN T++ ++ K G ++L D + K + D
Sbjct: 300 SKLVEAECYLHKMVN-SGVEPNEFTYNTIINGFCKAGMMQNA-DKILRDAMFKGFIP-DE 356
Query: 452 TTYTLVIHGLCRANKCEWAYLLFKE 476
TY+ +I+GLC A +F E
Sbjct: 357 FTYSSLINGLCNDGDMNRAMAVFYE 381
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 166/335 (49%), Gaps = 14/335 (4%)
Query: 186 DAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFI 244
+A FDE+ G+ + T N L+ LCK+G V+ + +F + +K + PN TFNIFI
Sbjct: 199 EAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFI 258
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
G C+ +DEA ++ + G P VISY+T+I +C+ + L +M G
Sbjct: 259 QGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVE 318
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
PN TY T+++ K+G + A +I G PD ++ LI L + A+ V
Sbjct: 319 PNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAV 378
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH-CKPNVQTFHPLLKS 423
+ M E G +NT++ S G +A ++++M +EH C P++ T++ ++
Sbjct: 379 FYEAM-EKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDM--MEHGCSPDIWTYNLVVNG 435
Query: 424 CFKTGKTDECLSQ---LLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH 480
K G CLS +L+D + K + DI T+ +I G C+ + A + M+ H
Sbjct: 436 LCKMG----CLSDANGILNDAIAKGCIP-DIFTFNTLIDGYCKQRNMDKAIEILDTMLSH 490
Query: 481 DITPRYQTCRLILDEV-KQKHMYDAAEKIEAVMKK 514
ITP T +L+ + K + + + + +A+++K
Sbjct: 491 GITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEK 525
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 170/368 (46%), Gaps = 5/368 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEE-MSKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G E + Y +++ K M +L + M KG I T + ++ G A
Sbjct: 316 GVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRA 375
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHG 246
+ F E G + + N L+ L K+G V A + ++ + P+ T+N+ ++G
Sbjct: 376 MAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNG 435
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
CK+ + +A + + GC P + +++T+I YC+Q N K E+LD M + G P+
Sbjct: 436 LCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPD 495
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
V+TY T+++ L K+ + + + M G P+ +N LI + + +V EA+ +++
Sbjct: 496 VITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFK 555
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
EM G+ PD T T+I +G +KA+ + + K + F+ ++ + +
Sbjct: 556 -EMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCE 614
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
K + +++ L + + D TY ++I C+ + A+ E I + P +
Sbjct: 615 --KLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSF 672
Query: 487 QTCRLILD 494
TC +L+
Sbjct: 673 TTCGKVLN 680
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 165/360 (45%), Gaps = 9/360 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEE-MSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
+ ++ +L K + + L + M +G L T ++ G ++A R + +
Sbjct: 219 FNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIV 278
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
+ GL + + N L+ CK K+ A ++ S + PN T+N I+G+CK +
Sbjct: 279 SEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQ 338
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
A +++ G P +YS++I C + ++ + E +G +++ Y T++
Sbjct: 339 NADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLV 398
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
L+K G +A+++ + M G PD +N ++ L + + +A + + + G
Sbjct: 399 KGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAK-GC 457
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH-CKPNVQTFHPLLKSCFKTGKTDEC 433
PD TFNT+I + + +KA +L+ M L H P+V T++ LL K K D
Sbjct: 458 IPDIFTFNTLIDGYCKQRNMDKAIEILDTM--LSHGITPDVITYNTLLNGLCKARKLDNV 515
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT-CRLI 492
+ M+ K + +I TY ++I C+ K A LFKEM +TP T C LI
Sbjct: 516 VDTF-KAMLEKG-CTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLI 573
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 101/211 (47%), Gaps = 9/211 (4%)
Query: 137 YEMMVDILGKVRQMDQM----RALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y +++ L K R++D + +A+LE+ +I+T N + + F + +A+ F
Sbjct: 499 YNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNIL---IESFCKDRKVSEAMELFK 555
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHT--FNIFIHGWCKI 250
E+ T GL + T+ L+ LC G+++ A +F+ ++ + T FNI I+ +C+
Sbjct: 556 EMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEK 615
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
V A+ +M G C P +Y +I SYC+ N + L E ++G P+ T
Sbjct: 616 LNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTC 675
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPD 341
V++ L + EA+ I M G P+
Sbjct: 676 GKVLNCLCVTHRLSEAVVIINLMVQNGIVPE 706
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 6/208 (2%)
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKM-KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
TY ++ L G FE + +M K V SK + ++ GR +VQEAV V++
Sbjct: 42 TYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFE- 100
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKT 427
M P ++N ++ + +G+ +A V M + P+V T +KS T
Sbjct: 101 RMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDI-GIYPDVYTHTIRMKSFCIT 159
Query: 428 GKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
G+ L +LL++M + + +Y VI G + N AY LF EM+ I P
Sbjct: 160 GRPTAAL-RLLNNMPGQG-CEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDIL 217
Query: 488 TCRLILDEVKQKHMYDAAEKI-EAVMKK 514
T ++ + +K +EK+ VMK+
Sbjct: 218 TFNKLIHVLCKKGNVQESEKLFSKVMKR 245
>gi|357139229|ref|XP_003571186.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Brachypodium distachyon]
Length = 628
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/425 (25%), Positives = 193/425 (45%), Gaps = 59/425 (13%)
Query: 96 IQPSHYLVNKLIHRFKDDWKSALGI------FRWAGSCPGYEHSSEIYEMMVDILGKVRQ 149
++ H+LV +++ K+ +G+ FRWA YEH + Y ++ L V Q
Sbjct: 82 LKVDHWLVREVM-------KTDVGVNVKMQFFRWAAKKRNYEHDTSTYMALIRCLEVVEQ 134
Query: 150 MDQMRALLEEMSKGHI--VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN 207
+M +++EM + + VT ++ ++R A AV F ++ + + N
Sbjct: 135 YGEMWKMIQEMVRNPVCVVTPMELSDIIRMLGNAKMISKAVAIFYQIKVRKCQPTAQAYN 194
Query: 208 LLLDTLCKEGKVELARSVFLELKS---CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
++ L EG+ E ++ E+ + C P + T++ I +CK+ R D A + EMK
Sbjct: 195 SMIIMLMHEGQYEKVHELYNEMSNEGHCFP-DTVTYSALISAFCKLGRQDSAIRLLNEMK 253
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
+G P Y+ +I + + N L +EM+ Q C P+V TYT ++ L K+G F+
Sbjct: 254 DNGMQPTAKIYTMLIALFFKLNNVHGALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRFD 313
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTM 384
EA +M+ G +PD+ N +I LG+A R+ +AV +++
Sbjct: 314 EAYNFFHEMRREGCRPDTVVINNMINFLGKAGRLDDAVKLFE------------------ 355
Query: 385 ITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK 444
EM L+ C P+V T++ ++K+ F++ +S + M
Sbjct: 356 ------------------EMGTLQ-CIPSVVTYNTIIKALFESKSRISEISSWFERM-KG 395
Query: 445 HHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP-RYQTCRLILDEVKQKHMYD 503
+S TY+++I G C+ N+ E A +L +EM P C LI D + + YD
Sbjct: 396 SGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLI-DALGKAKRYD 454
Query: 504 AAEKI 508
A ++
Sbjct: 455 IAHEL 459
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 184/380 (48%), Gaps = 16/380 (4%)
Query: 94 NAIQPSHYLVNKLIHRF--KDDWKSALGIF---RWAGSCPGYEHSSEIYEMMVDILGKVR 148
N +QP+ + LI F ++ ALG+F R P +E+ + LGK
Sbjct: 255 NGMQPTAKIYTMLIALFFKLNNVHGALGLFEEMRHQYCRPDVFTYTEL----IRGLGKAG 310
Query: 149 QMDQMRALLEEMSKGHIVTLNTIAKVMRRFSG-AGQWEDAVRTFDELGTFGLEKNTETMN 207
+ D+ EM + + M F G AG+ +DAV+ F+E+GT + T N
Sbjct: 311 RFDEAYNFFHEMRREGCRPDTVVINNMINFLGKAGRLDDAVKLFEEMGTLQCIPSVVTYN 370
Query: 208 LLLDTLCK-EGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKG 265
++ L + + ++ S F +K S I P+ T++I I G+CK NR ++A ++EM
Sbjct: 371 TIIKALFESKSRISEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDE 430
Query: 266 HGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEE 325
G PC +Y ++I + + + +EL E++ + Y ++ +L K+G ++
Sbjct: 431 KGFPPCPAAYCSLIDALGKAKRYDIAHELFQELKENCGSSSARVYAVMIKHLGKAGRLDD 490
Query: 326 AIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMI 385
A+ + ++M +G P+ +N L+ L RA + EA+ + M E+G PD +++N ++
Sbjct: 491 AVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMR-RMQEHGCIPDINSYNIIL 549
Query: 386 TMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKH 445
+ G +A +L M K KP+ +++ +L + G +E ++L+ +M N
Sbjct: 550 NGLAKTGGPHRAMEMLSNM-KQSAIKPDAVSYNTVLGAMSHAGLFEEA-AKLMKEM-NVL 606
Query: 446 HLSLDITTYTLVIHGLCRAN 465
D+ TY+ ++ + + +
Sbjct: 607 GFEYDLITYSSILEAIGKVD 626
>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 680
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 189/393 (48%), Gaps = 18/393 (4%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQ-MRALLEEMSKG---HIVTLNTIAKVMRRFSGAGQW 184
G + S Y ++++ + K + M L E +KG +IVT N I M R G+
Sbjct: 182 GCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCR---EGRV 238
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNI 242
+DA + L ++G + + + +L LC + + + +F E+ K C+ PN TF++
Sbjct: 239 DDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCV-PNEVTFDM 297
Query: 243 FIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
+ +C+ V+ A +Q+M HGC P + +I + C+Q Y+ L+ M G
Sbjct: 298 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG 357
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
C P+ ++YTTV+ L ++G +E A + +M P+ FN I L + +++A+
Sbjct: 358 CNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAI 417
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLK 422
+ ++ MPE G + T+N ++ F G + A LE N L C+PN T+ LL
Sbjct: 418 KLIEL-MPEYGCSVGIVTYNALVHGFCVQGRVDSA---LELFNNLP-CEPNTITYTTLLT 472
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
+ D ++LL +M+ K L+ T+ +++ C+ E A L +M+ H
Sbjct: 473 GLCHAERLDA-AAELLAEMIQK-DCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGC 530
Query: 483 TPRYQTCRLILDEV-KQKHMYDAAEKIEAVMKK 514
TP T +LD + K + +A E + ++ K
Sbjct: 531 TPNLITFNTLLDGITKDCNSEEALELLHGLVSK 563
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 177/384 (46%), Gaps = 40/384 (10%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++++ + + ++D + +L +S G + + V++ A +W+D F E+
Sbjct: 225 YNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMV 284
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK--SCIPPNAHTFNIFIHGWCKINRV 253
N T ++L+ C+ G VE A V ++ C P N NI I+ CK RV
Sbjct: 285 DKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTP-NTTLCNIVINAICKQGRV 343
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
D+A + M +GC+P ISY+T+++ CR + ELL EM + CPPN VT+ T
Sbjct: 344 DDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTF 403
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ------- 366
+ L + G E+AI++ E M G +N L++ RV A+ ++
Sbjct: 404 ICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEPN 463
Query: 367 ------------------------VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLE 402
EM + + TFN +++ F G E+A ++
Sbjct: 464 TITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVN 523
Query: 403 EMNKLEH-CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGL 461
+M +EH C PN+ TF+ LL K ++E L +LL +V+K +SLD TY+ V+ L
Sbjct: 524 QM--MEHGCTPNLITFNTLLDGITKDCNSEEAL-ELLHGLVSK-GVSLDTITYSSVVDVL 579
Query: 462 CRANKCEWAYLLFKEMIGHDITPR 485
R ++ E A + + + P+
Sbjct: 580 SREDRTEEAIQMLHAVQDMGMRPK 603
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 164/342 (47%), Gaps = 13/342 (3%)
Query: 176 RRFSGAGQWEDAVRTFDELGTF---GLEKNTETMNLLLDTLCKEGKVELARSVFLEL--K 230
R SGA + T T G + + T +LL+ +CK A +V E+ K
Sbjct: 157 RPSSGASATAEGSATRSPCSTMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAK 216
Query: 231 SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSK 290
C P N T+N+ I+G C+ RVD+A+ + + +G P ++SY+T+++ C +
Sbjct: 217 GCTP-NIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDD 275
Query: 291 VYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIY 350
V L EM + C PN VT+ ++ + + G E AI++ ++M G P++ N +I
Sbjct: 276 VKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVIN 335
Query: 351 TLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHC 410
+ + RV +A Y + M G PDT ++ T++ G E A +L EM + ++C
Sbjct: 336 AICKQGRVDDA-YDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVR-KNC 393
Query: 411 KPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWA 470
PN TF+ + + G ++ + L +++ ++ S+ I TY ++HG C + + A
Sbjct: 394 PPNEVTFNTFICILCQKGLIEQAIK--LIELMPEYGCSVGIVTYNALVHGFCVQGRVDSA 451
Query: 471 YLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
LF + T Y T +L + DAA ++ A M
Sbjct: 452 LELFNNLPCEPNTITYTT---LLTGLCHAERLDAAAELLAEM 490
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 145/282 (51%), Gaps = 11/282 (3%)
Query: 126 SCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQW 184
+CP E + + + IL + ++Q L+E M + G V + T ++ F G+
Sbjct: 392 NCPPNEVT---FNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRV 448
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNI 242
+ A+ F+ L E NT T LL LC +++ A + E+ K C P NA TFN+
Sbjct: 449 DSALELFNNLPC---EPNTITYTTLLTGLCHAERLDAAAELLAEMIQKDC-PLNAVTFNV 504
Query: 243 FIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
+ +C+ V+EA + +M HGC P +I+++T++ + N + ELL + ++G
Sbjct: 505 LVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKG 564
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
+ +TY++V+ L++ EEAI++ ++ +G +P +N +++ L + +A+
Sbjct: 565 VSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAI 624
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
+ M NG P+ ST+ +I +H G ++A +VL E+
Sbjct: 625 DFFAY-MVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSEL 665
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 99/230 (43%), Gaps = 14/230 (6%)
Query: 104 NKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS 161
N L+H F + SAL +F E ++ Y ++ L ++D LL EM
Sbjct: 436 NALVHGFCVQGRVDSALELFNNLPC----EPNTITYTTLLTGLCHAERLDAAAELLAEMI 491
Query: 162 KG----HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEG 217
+ + VT N + F G E+A+ +++ G N T N LLD + K+
Sbjct: 492 QKDCPLNAVTFNVLVSF---FCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDC 548
Query: 218 KVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYS 276
E A + L S + + T++ + + +R +EA + ++ G P V Y+
Sbjct: 549 NSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYN 608
Query: 277 TIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
I+ + C++ + + M + GC PN TY ++ LA G +EA
Sbjct: 609 KILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEA 658
>gi|115445449|ref|NP_001046504.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|50251963|dbj|BAD27898.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536035|dbj|BAF08418.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|125581581|gb|EAZ22512.1| hypothetical protein OsJ_06176 [Oryza sativa Japonica Group]
gi|215704610|dbj|BAG94238.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737116|dbj|BAG96045.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 632
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/392 (26%), Positives = 173/392 (44%), Gaps = 42/392 (10%)
Query: 118 LGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI--VTLNTIAKVM 175
+ FRWA Y+H + Y ++ L V Q +M +++EM + I VT +++V+
Sbjct: 107 MQFFRWAAKKRNYQHDTSTYMALIHCLELVEQYGEMWKMIQEMVRSPICVVTPMELSQVI 166
Query: 176 RRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPP 235
R A A+ F ++ + + N ++ L EG+ E ++ E+ +
Sbjct: 167 RMLGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSN---- 222
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
+GH CHP ++YS +I ++C+ LL
Sbjct: 223 ----------------------------EGH-CHPDTVTYSALISAFCKLGRQDSAIRLL 253
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
+EM+ G P YT ++S K + A+ + E+M+ + +PD + LI LG+A
Sbjct: 254 NEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKA 313
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQ 415
R+ EA + Y EM PDT N MI G + + EEM + HC PNV
Sbjct: 314 GRIDEAYHFYH-EMQREDCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMG-VSHCIPNVV 371
Query: 416 TFHPLLKSCFKT-GKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLF 474
T++ ++K+ F++ + E S + + +S TY+++I G C+ N+ E A +L
Sbjct: 372 TYNTIIKALFESKSRVSEVFSWF--ERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLL 429
Query: 475 KEMIGHDITP-RYQTCRLILDEVKQKHMYDAA 505
+EM P C LI D + + YD A
Sbjct: 430 EEMDEKGFPPCPAAYCSLI-DALGKAKRYDLA 460
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 185/381 (48%), Gaps = 16/381 (4%)
Query: 94 NAIQPSHYLVNKLIHRF--KDDWKSALGIF---RWAGSCPGYEHSSEIYEMMVDILGKVR 148
N +QP+ + +I F D+ AL +F R+ P +E+ + LGK
Sbjct: 259 NGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTEL----IRGLGKAG 314
Query: 149 QMDQMRALLEEMSKGHIVTLNTIAKVMRRFSG-AGQWEDAVRTFDELGTFGLEKNTETMN 207
++D+ EM + + M F G AG+ +D ++ F+E+G N T N
Sbjct: 315 RIDEAYHFYHEMQREDCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYN 374
Query: 208 LLLDTLCK-EGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKG 265
++ L + + +V S F +K S I P+ T++I I G+CK NR+++A ++EM
Sbjct: 375 TIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDE 434
Query: 266 HGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEE 325
G PC +Y ++I + + + EL E++ + Y ++ +L K+G ++
Sbjct: 435 KGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDD 494
Query: 326 AIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMI 385
AI + ++M +G P+ +N L+ L RA + EA+ + +M E+G PD +++N ++
Sbjct: 495 AINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMR-KMQEHGCLPDINSYNIIL 553
Query: 386 TMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKH 445
+ G +A +L M K KP+ +++ +L + G +E ++L+ +M N
Sbjct: 554 NGLAKTGGPHRAMEMLTNM-KNSTIKPDAVSYNTVLSALSHAGMFEEA-AELMKEM-NAL 610
Query: 446 HLSLDITTYTLVIHGLCRANK 466
D+ TY+ ++ + + ++
Sbjct: 611 GFEYDLITYSSILEAIGKVDQ 631
>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 807
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/430 (23%), Positives = 203/430 (47%), Gaps = 9/430 (2%)
Query: 85 QSLKQDHVCNAIQPSHYLVNKLIHRFK--DDWKSALGIFRWAGSCPGYEHSSEIYEMMVD 142
Q + + V N +QP + N LIH + WK A+ +F+ S G ++ V
Sbjct: 266 QGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTS-RGVIPNTVTCSTFVA 324
Query: 143 ILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEK 201
L K ++++ R + M +KGH + + + + ++ ++ AG D F+ + G+
Sbjct: 325 FLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVP 384
Query: 202 NTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTI 260
N N+L++ K G V A +F ++ K + P+ T+ IH +C++ +D+A
Sbjct: 385 NQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKF 444
Query: 261 QEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKS 320
M G P Y +IQ +C + K EL+ E++ +G P ++++ +++++L K
Sbjct: 445 NHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKE 504
Query: 321 GDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTST 380
G EA RI + + G K D F LI ++ EA V+ M G+ PD T
Sbjct: 505 GRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDA-MVSVGIEPDIVT 563
Query: 381 FNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDD 440
+ T++ +G + + E+ + KP T+ +L F G+T ++ +
Sbjct: 564 YGTLVNGCCKNGRIDDGLILFRELLH-KGVKPTTFTYGIILDGLFHAGRTAAA-KEMFQE 621
Query: 441 MVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKH 500
M+ + +++ I TY++++ GLCR N E A +F+++ ++ +++ ++ +
Sbjct: 622 MI-ESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKAR 680
Query: 501 MYDAAEKIEA 510
+ AE + A
Sbjct: 681 RREEAEGLFA 690
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 142/285 (49%), Gaps = 7/285 (2%)
Query: 180 GAGQWE-DAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNA 237
G QW D +R + G G N + ++ L KEGKV A +F E+ + +PPN
Sbjct: 188 GRSQWALDILRMAVKQGG-GCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNV 246
Query: 238 HTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDE 297
T+N IH CK VD+AQ +++M G+G P ++Y+T+I Y + + + E
Sbjct: 247 VTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKE 306
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
M ++G PN VT +T +++L K G EEA + M G K + ++ L++ A
Sbjct: 307 MTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGC 366
Query: 358 VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTF 417
+ + ++ + M +G+ P+ FN ++ ++ G +A + E+M K P+V T+
Sbjct: 367 LVDMSNLFNL-MVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQK-RGLNPDVLTY 424
Query: 418 HPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC 462
++ + + G D+ + + + M++K + + Y +I G C
Sbjct: 425 LAVIHAFCRMGSMDDAMDK-FNHMIDK-GVEPNFAVYQCLIQGFC 467
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 174/384 (45%), Gaps = 26/384 (6%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++ L K R +D+ + +L +M + VT NT+ + +S GQW+ AVR F
Sbjct: 249 YNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTL---IHGYSTLGQWKQAVRMFK 305
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNI-----FIHGW 247
E+ + G+ NT T + + LCK G++E AR F + + H NI +HG+
Sbjct: 306 EMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLA----KGHKLNIISYSTLLHGY 361
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
+ + M G P ++ ++ Y + + + ++MQ +G P+V
Sbjct: 362 ATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDV 421
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIY---TLGRASRVQEAVYV 364
+TY V+ + G ++A+ M G +P+ + CLI T G + +E VY
Sbjct: 422 LTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVY- 480
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
E+ G+ P +F ++I G +A + + + + K +V F L+
Sbjct: 481 ---EIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGE-KADVNIFTSLIDGY 536
Query: 425 FKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
GK E ++ D MV+ + DI TY +++G C+ + + +LF+E++ + P
Sbjct: 537 CLIGKMSEAF-RVHDAMVSVG-IEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKP 594
Query: 485 RYQTCRLILDEVKQKHMYDAAEKI 508
T +ILD + AA+++
Sbjct: 595 TTFTYGIILDGLFHAGRTAAAKEM 618
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 146/314 (46%), Gaps = 8/314 (2%)
Query: 205 TMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRVDEA-QWTIQE 262
T ++L+D C+ +++LA + F L+ + + + + G C R DEA
Sbjct: 105 TYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDVLFHR 164
Query: 263 MKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM--QAQGCPPNVVTYTTVMSYLAKS 320
M GC P ISYST+++S C ++L Q GCP NVV Y+TV+ L K
Sbjct: 165 MPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHGLFKE 224
Query: 321 GDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTST 380
G EA + +M G P+ +N +I+ L +A V +A + + +M NGV PD T
Sbjct: 225 GKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILR-QMVGNGVQPDNVT 283
Query: 381 FNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDD 440
+NT+I +S G ++A + +EM PN T + K G+ +E + D
Sbjct: 284 YNTLIHGYSTLGQWKQAVRMFKEMTS-RGVIPNTVTCSTFVAFLCKHGRIEEA-REFFDS 341
Query: 441 MVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKH 500
M+ K H L+I +Y+ ++HG A LF M+ I P ++++ +
Sbjct: 342 MLAKGH-KLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCG 400
Query: 501 MYDAAEKIEAVMKK 514
M A I M+K
Sbjct: 401 MVREAMFIFEDMQK 414
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 124/282 (43%), Gaps = 7/282 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRA---LLEEMSKGHIVTLNTIAKVMRRFSGAGQWE 185
G E + +Y+ ++ G D ++A + E +KG + + A ++ G+
Sbjct: 451 GVEPNFAVYQCLIQ--GFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVF 508
Query: 186 DAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFI 244
+A R FD + G + + L+D C GK+ A V + S I P+ T+ +
Sbjct: 509 EAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLV 568
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
+G CK R+D+ +E+ G P +Y I+ + E+ EM G
Sbjct: 569 NGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIA 628
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
+ TY+ +++ L ++ EEAI + +K+ + K D N +I + +A R +EA +
Sbjct: 629 VTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGL 688
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNK 406
+ +P+ G+ P T+ M+ G E+A V M K
Sbjct: 689 F-ASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLK 729
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 101/221 (45%), Gaps = 2/221 (0%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTF 240
G+ +D + F EL G++ T T ++LD L G+ A+ +F E+ +S I T+
Sbjct: 575 GRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTY 634
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
+I + G C+ N +EA Q++ ++ + +I + + L +
Sbjct: 635 SILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPD 694
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
G P V TYT +M L K G EEA + M G P S F N ++ TL + +
Sbjct: 695 YGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVK 754
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVL 401
A +Y + + + ST + ++++FS G H + ++L
Sbjct: 755 A-GIYMCRVDGKSILFEASTASMLLSLFSCKGKHREHLNLL 794
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 82/181 (45%), Gaps = 3/181 (1%)
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
P V TY+ ++ ++ + A + G K D + L+ L A R EAV V
Sbjct: 101 PTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDV 160
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLE-EMNKLEHCKPNVQTFHPLLKS 423
MPE G PD +++T++ G + A +L + + C NV + ++
Sbjct: 161 LFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHG 220
Query: 424 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
FK GK E L +M + + ++ TY VIH LC+A + A + ++M+G+ +
Sbjct: 221 LFKEGKVGEA-CDLFHEM-TQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQ 278
Query: 484 P 484
P
Sbjct: 279 P 279
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 114/248 (45%), Gaps = 6/248 (2%)
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI 329
P V +YS +I CR + + QG +V+ ++++ L + +EA+ +
Sbjct: 101 PTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDV 160
Query: 330 T-EKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP-DTSTFNTMITM 387
+M +G PD+ ++ ++ ++ R Q A+ + ++ + + G P + ++T++
Sbjct: 161 LFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHG 220
Query: 388 FSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHL 447
G +A + EM + + PNV T++ ++ + K D+ +L MV + +
Sbjct: 221 LFKEGKVGEACDLFHEMTQ-QGVPPNVVTYNSVIHALCKARAVDKA-QGILRQMVG-NGV 277
Query: 448 SLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAE 506
D TY +IHG + + A +FKEM + P TC + + K + +A E
Sbjct: 278 QPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEARE 337
Query: 507 KIEAVMKK 514
++++ K
Sbjct: 338 FFDSMLAK 345
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/345 (29%), Positives = 166/345 (48%), Gaps = 8/345 (2%)
Query: 150 MDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLL 209
+D + ++E+ + T N++ M + G++E A+ ++ NT T N L
Sbjct: 283 LDIVDFMIEKGFDPDVYTYNSLISGMCKL---GEFEKAIEILQQMILRECSPNTVTYNTL 339
Query: 210 LDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGC 268
+ LCKE ++E A + L S + P+ TFN I G C D A +EMK GC
Sbjct: 340 ISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGC 399
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
P +YS +I S C + + LL EM++ GC N V Y T++ L KS E+A
Sbjct: 400 KPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEE 459
Query: 329 ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF 388
I ++M+++G S +N LI L + RV+EA + +M G+ PD T+N+++T F
Sbjct: 460 IFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMD-QMIMEGLKPDKFTYNSLLTYF 518
Query: 389 SHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
G EKA +++ M C+P++ T+ L+ + G+ D S+LL V +
Sbjct: 519 CRVGDIEKAGDIVQTMAS-NGCEPDIFTYGTLIGGLCRAGRVD-VASKLLRS-VQMKGIV 575
Query: 449 LDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
L Y VI L + + LF+EM+ P T +++
Sbjct: 576 LTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVF 620
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 173/355 (48%), Gaps = 8/355 (2%)
Query: 144 LGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKN 202
L + D + LL+++ S G I T A +++ F+ + E+ ++ + G + +
Sbjct: 65 LTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILE--NELGFKPD 122
Query: 203 TETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQ 261
T N+ L+ L ++ K++L + ++ I + TFN+ I CK +++ A ++
Sbjct: 123 TNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLE 182
Query: 262 EMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSG 321
EM HG P I+++T++Q + + + + ++ +M GC V+ +++ K G
Sbjct: 183 EMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEG 242
Query: 322 DFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTF 381
EEA+R ++ G PD FN L+ R V +A+ + M E G PD T+
Sbjct: 243 RVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDF-MIEKGFDPDVYTY 301
Query: 382 NTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDM 441
N++I+ G EKA +L++M L C PN T++ L+ + K + E + L +
Sbjct: 302 NSLISGMCKLGEFEKAIEILQQM-ILRECSPNTVTYNTLISALCKENEI-EAATDLARIL 359
Query: 442 VNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV 496
V+K L D+ T+ +I GLC + + A +F+EM P T +++D +
Sbjct: 360 VSKGLLP-DVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSL 413
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 168/350 (48%), Gaps = 6/350 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
+ +++ L K Q+ +LEEM+ G T +M+ F G A++ ++
Sbjct: 161 FNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQML 220
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
+G ++ +L++ CKEG+VE A LE+ + P+ TFN ++G+C+I V+
Sbjct: 221 GYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVN 280
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
+A + M G P V +Y+++I C+ F K E+L +M + C PN VTY T++
Sbjct: 281 DALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLI 340
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
S L K + E A + + G PD FN LI L + A+ +++ EM G
Sbjct: 341 SALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFE-EMKNKGC 399
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
PD T++ +I + ++A +L+EM C N ++ L+ K+ + ++
Sbjct: 400 KPDEFTYSILIDSLCYERRLKEALMLLKEMES-SGCARNAVVYNTLIDGLCKSRRIED-- 456
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
++ + D + +S TY +I GLC+ + E A L +MI + P
Sbjct: 457 AEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKP 506
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/444 (22%), Positives = 202/444 (45%), Gaps = 53/444 (11%)
Query: 37 SSSPIESYCSDGARLDHHQVLCVDSPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAI 96
S+ + C+ + HH LP + ++ ++ SS D + LKQ +I
Sbjct: 36 STFKFPTLCTTPSSTTHHP--------LPPNETLLLQLTQSSSFDSITTLLKQLKSSGSI 87
Query: 97 QPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRAL 156
P+ LI F + + + + + G++ + Y + ++ L + ++ + L
Sbjct: 88 -PNATTFATLIQSFTN-FHEIENLLKILENELGFKPDTNFYNIALNALVEDNKLKLVEML 145
Query: 157 LEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK 215
+M ++G ++ ++T +++ A Q A+ +E+ GL+ + T L+ +
Sbjct: 146 HSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIE 205
Query: 216 EGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI 273
EG + A + ++ C+ N + + ++G+CK RV+EA + E+ G P +
Sbjct: 206 EGDLNGALKMKKQMLGYGCLLTNV-SVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQV 264
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
++++++ +CR N + +++D M +G P+V TY +++S + K G+FE+AI I ++M
Sbjct: 265 TFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQM 324
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
+ P++ +N LI L + + ++ A + ++ + G+ PD TFNT+I +
Sbjct: 325 ILRECSPNTVTYNTLISALCKENEIEAATDLARI-LVSKGLLPDVCTFNTLIQGLCLSKN 383
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
+ A + EEM K + CKP D T
Sbjct: 384 QDIAMEMFEEM-KNKGCKP-------------------------------------DEFT 405
Query: 454 YTLVIHGLCRANKCEWAYLLFKEM 477
Y+++I LC + + A +L KEM
Sbjct: 406 YSILIDSLCYERRLKEALMLLKEM 429
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 136/316 (43%), Gaps = 47/316 (14%)
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
+PPN + + + D ++++K G P +++T+IQS+ NF ++
Sbjct: 55 LPPN----ETLLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFT---NFHEIE 107
Query: 293 ELLDEMQAQ-GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYT 351
LL ++ + G P+ Y ++ L + + + KM G D FN LI
Sbjct: 108 NLLKILENELGFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKA 167
Query: 352 LGRASRVQEAVYVYQVEMPENGVAPDTSTFNTM--------------------------- 384
L +A +++ A+ + + EM +G+ PD TF T+
Sbjct: 168 LCKAHQLRPAILMLE-EMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLL 226
Query: 385 --------ITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQ 436
+ F G E+A + E+++ E P+ TF+ L+ + G ++ L
Sbjct: 227 TNVSVKVLVNGFCKEGRVEEALRFVLEVSE-EGFSPDQVTFNSLVNGFCRIGNVNDAL-D 284
Query: 437 LLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV 496
++D M+ K D+ TY +I G+C+ + E A + ++MI + +P T ++ +
Sbjct: 285 IVDFMIEKG-FDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISAL 343
Query: 497 KQKHMYDAAEKIEAVM 512
+++ +AA + ++
Sbjct: 344 CKENEIEAATDLARIL 359
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 144/325 (44%), Gaps = 26/325 (8%)
Query: 41 IESYCSDG---ARLDHHQVLCVDSPRLPDI---DVIISKVHVGSSED---EVFQSLKQDH 91
I + C + A D ++L V LPD+ + +I + + ++D E+F+ +K
Sbjct: 340 ISALCKENEIEAATDLARIL-VSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKN-- 396
Query: 92 VCNAIQPSHYLVNKLIHR--FKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQ 149
+P + + LI ++ K AL + + S G ++ +Y ++D L K R+
Sbjct: 397 --KGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESS-GCARNAVVYNTLIDGLCKSRR 453
Query: 150 MDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTET 205
++ + ++M + VT NT+ + + + E+A + D++ GL+ + T
Sbjct: 454 IEDAEEIFDQMELLGVSRSSVTYNTLIDGLCK---NKRVEEASQLMDQMIMEGLKPDKFT 510
Query: 206 MNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
N LL C+ G +E A + + S P+ T+ I G C+ RVD A ++ ++
Sbjct: 511 YNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQ 570
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGD-F 323
G +Y+ +IQ+ + + L EM + PP+ +T+ V L G
Sbjct: 571 MKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPI 630
Query: 324 EEAIRITEKMKIVGSKPDSRFFNCL 348
+EAI T +M G P+ F L
Sbjct: 631 QEAIDFTVEMLEKGILPEFPSFGFL 655
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 154/299 (51%), Gaps = 5/299 (1%)
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDE 255
G E +T T N L++ LC E KV A + + ++ PN T+N ++G CK
Sbjct: 129 LGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSL 188
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
A +++M V +YSTII S CR L EM+ +G ++VTY +++
Sbjct: 189 ALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVG 248
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
L K+G + + +++ + M P+ FN LI + ++QEA +Y+ EM G++
Sbjct: 249 GLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYK-EMITKGIS 307
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS 435
P+T T+N+++ + +A ++L+ M + +C P++ TF L+K K + DE +
Sbjct: 308 PNTITYNSLMDGYCMQNRLSEANNMLDLMVR-NNCSPDIVTFTSLIKGYCKVKRVDEGMK 366
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
L ++K L + TY++++ G C++ K E A LF+EM+ + P T ++LD
Sbjct: 367 --LFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLD 423
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 177/365 (48%), Gaps = 12/365 (3%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKG----HIVTLNTIAKVMRRFSGAGQW 184
GYE + + +++ L ++ + L+ M + ++VT N+I + +
Sbjct: 130 GYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLA 189
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIF 243
D +R DE ++ + T + ++D+LC++G ++ A S+F E+++ I + T+N
Sbjct: 190 LDLLRKMDERN---VKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSL 246
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
+ G CK + ++ +++M P VI+++ +I + ++ + EL EM +G
Sbjct: 247 VGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGI 306
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
PN +TY ++M EA + + M PD F LI + RV E +
Sbjct: 307 SPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMK 366
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
+++ ++ + G+ +T T++ ++ F G E A + +EM L P+V T+ LL
Sbjct: 367 LFR-KISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSL-GVLPDVMTYGILLDG 424
Query: 424 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
GK ++ L ++ +D+ K ++LDI YT++I G+C+ K E A+ LF + +
Sbjct: 425 LCDNGKLEKAL-EIFEDL-QKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVK 482
Query: 484 PRYQT 488
P T
Sbjct: 483 PNVMT 487
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 161/329 (48%), Gaps = 8/329 (2%)
Query: 150 MDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLL 209
+D +R + E K + T +TI + R G + A+ F E+ T G++ + T N L
Sbjct: 190 LDLLRKMDERNVKADVFTYSTIIDSLCR---DGCIDAAISLFKEMETKGIKSSLVTYNSL 246
Query: 210 LDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGC 268
+ LCK GK + ++ S I PN TFN+ I + K ++ EA +EM G
Sbjct: 247 VGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGI 306
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
P I+Y++++ YC Q S+ +LD M C P++VT+T+++ K +E ++
Sbjct: 307 SPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMK 366
Query: 329 ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF 388
+ K+ G ++ ++ L+ ++ +++ A ++Q EM GV PD T+ ++
Sbjct: 367 LFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQ-EMVSLGVLPDVMTYGILLDGL 425
Query: 389 SHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
+G EKA + E++ K ++ + +++ K GK ++ + + +
Sbjct: 426 CDNGKLEKALEIFEDLQK-SKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCS--LPCKGVK 482
Query: 449 LDITTYTLVIHGLCRANKCEWAYLLFKEM 477
++ TYT++I GLC+ A +L ++M
Sbjct: 483 PNVMTYTVMISGLCKKGSLSEANILLRKM 511
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/405 (23%), Positives = 187/405 (46%), Gaps = 9/405 (2%)
Query: 94 NAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMD 151
N QP+ N +++ D AL + R + Y ++D L + +D
Sbjct: 164 NGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDE-RNVKADVFTYSTIIDSLCRDGCID 222
Query: 152 QMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLL 210
+L +EM +KG +L T ++ AG+W D V+ ++ + + N T N+L+
Sbjct: 223 AAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLI 282
Query: 211 DTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCH 269
D KEGK++ A ++ E+ I PN T+N + G+C NR+ EA + M + C
Sbjct: 283 DVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCS 342
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI 329
P +++++++I+ YC+ + +L ++ +G N VTY+ ++ +SG E A +
Sbjct: 343 PDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEEL 402
Query: 330 TEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFS 389
++M +G PD + L+ L ++++A+ +++ ++ ++ + D + +I
Sbjct: 403 FQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFE-DLQKSKMNLDIVMYTIIIEGMC 461
Query: 390 HHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSL 449
G E A+++ + + KPNV T+ ++ K G E + LL M +
Sbjct: 462 KGGKVEDAWNLFCSL-PCKGVKPNVMTYTVMISGLCKKGSLSEA-NILLRKMEEDGNEPN 519
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
D TY +I R + L +EM + + ++++D
Sbjct: 520 D-CTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 563
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 109/212 (51%), Gaps = 2/212 (0%)
Query: 146 KVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTE 204
KV+++D+ L ++SK G + T + +++ F +G+ E A F E+ + G+ +
Sbjct: 357 KVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVM 416
Query: 205 TMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
T +LLD LC GK+E A +F +L KS + + + I I G CK +V++A +
Sbjct: 417 TYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSL 476
Query: 264 KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF 323
G P V++Y+ +I C++ + S+ LL +M+ G PN TY T++ + GD
Sbjct: 477 PCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDL 536
Query: 324 EEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
+ ++ E+MK G D+ +I L A
Sbjct: 537 TASAKLIEEMKSCGFSADASSIKMVIDMLSSA 568
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 120/262 (45%), Gaps = 5/262 (1%)
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
D+A QEM P ++ +S F+ V + +M+ G N+ T +
Sbjct: 47 DDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIM 106
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
++ + A + K+ +G +PD+ FN LI L S+V EAV V M ENG
Sbjct: 107 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAV-VLVARMVENG 165
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
P+ T+N+++ G A +L +M++ + K +V T+ ++ S + G D
Sbjct: 166 CQPNVVTYNSIVNGICKSGDTSLALDLLRKMDE-RNVKADVFTYSTIIDSLCRDGCIDAA 224
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
+S L +M K S + TY ++ GLC+A K L K+M I P T +++
Sbjct: 225 IS-LFKEMETKGIKS-SLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLI 282
Query: 494 DE-VKQKHMYDAAEKIEAVMKK 514
D VK+ + +A E + ++ K
Sbjct: 283 DVFVKEGKLQEANELYKEMITK 304
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 162/316 (51%), Gaps = 5/316 (1%)
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSC 232
++R + A + + TF L G + N LL L K G V+LA V+ E+ +S
Sbjct: 121 LIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIARSG 180
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
I N +T NI ++ CK +++D+ + + +M+ G +++Y+T+I +YCR+ + +
Sbjct: 181 IELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAF 240
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
E+++ M +G P + TY V++ L K G + A + +M +G PD+ +N L+
Sbjct: 241 EVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVES 300
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
R + EA ++ +M GV+PD +F+++I + S +GH ++A +M K P
Sbjct: 301 CRNNNFLEAKDIFS-DMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDM-KTSGLVP 358
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
+ + L+ + G E L ++ D M+ + +LD+ Y +++GLC+ A
Sbjct: 359 DNVIYTILINGYCRNGMMSEAL-EIRDKML-EQGCALDVVAYNTILNGLCKKKLLADANA 416
Query: 473 LFKEMIGHDITPRYQT 488
LF EM+ + P + T
Sbjct: 417 LFDEMVERGVVPDFCT 432
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 111/467 (23%), Positives = 211/467 (45%), Gaps = 37/467 (7%)
Query: 53 HHQVLCVDSPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLI----- 107
H Q+ + + R P + II +H E Q+ Q+ +A P +LV K++
Sbjct: 19 HKQLYVIATIRNPSEECIIRYLHT----LENCQNPNQEPTSSA-PPDSFLVEKILLNLRR 73
Query: 108 ---HRFKDDWKSALGIFRWAG--------SCPGYEHSSEIYEMMVDILGKVRQMDQMRAL 156
R D L + R +G S + + ++ D+L +R Q R L
Sbjct: 74 VRSKRLSDAQTLILRMIRRSGVSRVEIVESLISMSSTCGVDNLVFDLL--IRSYVQARKL 131
Query: 157 LEEMS-------KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLL 209
E KG +V++N ++ G + A ++E+ G+E N T+N++
Sbjct: 132 NEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIM 191
Query: 210 LDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGC 268
++ LCK+ K++ + +++ + I + T+N I+ +C+ + EA + M G G
Sbjct: 192 VNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGL 251
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
P + +Y+ +I C++ + + + +EM + G P+ TY T++ ++ +F EA
Sbjct: 252 KPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKD 311
Query: 329 ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF 388
I M G PD F+ LI R + +A+ ++ +M +G+ PD + +I +
Sbjct: 312 IFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFR-DMKTSGLVPDNVIYTILINGY 370
Query: 389 SHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS-CFKTGKTDECLSQLLDDMVNKHHL 447
+G +A + ++M + + C +V ++ +L C K D + L D+MV + +
Sbjct: 371 CRNGMMSEALEIRDKMLE-QGCALDVVAYNTILNGLCKKKLLADA--NALFDEMVERGVV 427
Query: 448 SLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
D T+T +IHG C+ A LF M +I P T +++D
Sbjct: 428 P-DFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILID 473
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 139/270 (51%), Gaps = 3/270 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +++ L K + + AL +EM +G + T ++ G A+ F +
Sbjct: 398 YNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMT 457
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVD 254
++ + T N+L+D CK ++E A ++ E+ S I PN ++ I ++G+C + V
Sbjct: 458 QKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVS 517
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA EM G P +++ +T+I+ YCR + SK E L +M ++G P+ +TY T++
Sbjct: 518 EAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLI 577
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
+ K ++A + KM+ G +PD +N ++ R R+QEA + + +M E G+
Sbjct: 578 NGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILR-KMIERGI 636
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
PD ST+ T+I + + ++AF +EM
Sbjct: 637 DPDRSTYTTLINGYVSQDNLKEAFRFHDEM 666
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 165/350 (47%), Gaps = 6/350 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVM-RRFSGAGQWEDAVRTFDELG 195
+ ++ + + +DQ +M +V N I ++ + G +A+ D++
Sbjct: 328 FSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKML 387
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
G + N +L+ LCK+ + A ++F E+ + + P+ TF IHG CK +
Sbjct: 388 EQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMG 447
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
+A M P +++Y+ +I +C+ K EL +EM ++ PN ++Y ++
Sbjct: 448 KALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILV 507
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
+ G EA R+ ++M G KP N +I R+ + +A + +M GV
Sbjct: 508 NGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADE-FLGKMISEGV 566
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
PD+ T+NT+I F + +KAF ++ +M + + +P+V T++ +L + G+ E
Sbjct: 567 GPDSITYNTLINGFVKGEYMDKAFFLINKM-ETKGLQPDVVTYNVILNGFCRQGRMQE-- 623
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
++L+ + + + D +TYT +I+G + + A+ EM+ P
Sbjct: 624 AELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVP 673
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 140/631 (22%), Positives = 251/631 (39%), Gaps = 157/631 (24%)
Query: 23 IRFHSSSENCSHI----VSSSPIESYCSDGARLDHHQVLCVDSPRLPDIDVIISKV--HV 76
IR+ + ENC + SS+P +S+ + L+ +V S RL D +I ++
Sbjct: 37 IRYLHTLENCQNPNQEPTSSAPPDSFLVEKILLNLRRV---RSKRLSDAQTLILRMIRRS 93
Query: 77 GSSEDEVFQSLKQ-------DHVCNAIQPSHYLVNKLIHRFKDDWK-------------- 115
G S E+ +SL D++ + Y+ + ++ D +K
Sbjct: 94 GVSRVEIVESLISMSSTCGVDNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINAC 153
Query: 116 -SALGIFRWAG------------SCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK 162
S LG G + G E + +MV+ L K ++D ++ L +M +
Sbjct: 154 NSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQ 213
Query: 163 ----GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
IVT NT+ R G +A + + GL+ T N +++ LCK+G+
Sbjct: 214 KGIFADIVTYNTLINAYCR---EGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGR 270
Query: 219 VELARSVFLELKSC-IPPNAHTFNIFIHGWCKINR------------------------- 252
A+ VF E+ S + P+ T+N + C+ N
Sbjct: 271 YVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSS 330
Query: 253 ----------VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
+D+A ++MK G P + Y+ +I YCR S+ E+ D+M QG
Sbjct: 331 LIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQG 390
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
C +VV Y T+++ L K +A + ++M G PD F LI+ + + +A+
Sbjct: 391 CALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKAL 450
Query: 363 YVYQVEMPENGVAPDTSTFNTMI----------------------TMFSHH--------- 391
++ + M + + PD T+N +I +F +H
Sbjct: 451 SLFGI-MTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNG 509
Query: 392 ----GHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG---KTDECLSQLLDD---- 440
G +AF + +EM + + KP + T + ++K ++G K DE L +++ +
Sbjct: 510 YCNLGFVSEAFRLWDEMIR-KGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGP 568
Query: 441 -----------------------MVNKHH---LSLDITTYTLVIHGLCRANKCEWAYLLF 474
++NK L D+ TY ++++G CR + + A L+
Sbjct: 569 DSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELIL 628
Query: 475 KEMIGHDITP-RYQTCRLILDEVKQKHMYDA 504
++MI I P R LI V Q ++ +A
Sbjct: 629 RKMIERGIDPDRSTYTTLINGYVSQDNLKEA 659
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 105/210 (50%), Gaps = 2/210 (0%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLN-TIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +++D K +M++ L EM I + + A ++ + G +A R +DE+
Sbjct: 468 YNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMI 527
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVD 254
G++ T N ++ C+ G + A ++ S + P++ T+N I+G+ K +D
Sbjct: 528 RKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMD 587
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
+A + I +M+ G P V++Y+ I+ +CRQ + +L +M +G P+ TYTT++
Sbjct: 588 KAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLI 647
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRF 344
+ + +EA R ++M G PD F
Sbjct: 648 NGYVSQDNLKEAFRFHDEMLQRGFVPDDDF 677
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 75/168 (44%), Gaps = 4/168 (2%)
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
D+ F+ LI + +A ++ E +++ + G + N+++ G + A+ V
Sbjct: 114 DNLVFDLLIRSYVQARKLNEGTDTFKI-LRRKGFLVSINACNSLLGGLVKMGWVDLAWEV 172
Query: 401 LEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHG 460
E+ + + NV T + ++ + K K D+ L+D + + + DI TY +I+
Sbjct: 173 YNEIAR-SGIELNVYTLNIMVNALCKDHKIDDVKPFLID--MEQKGIFADIVTYNTLINA 229
Query: 461 LCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
CR A+ + M G + P T +++ + +K Y A+ +
Sbjct: 230 YCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGV 277
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 192/374 (51%), Gaps = 6/374 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++D L K ++ R LL +M S+G + NT ++ + G ++A + +
Sbjct: 246 YNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMT 305
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVD 254
L + T N+L++ LC EG++E A + E+++ + P+ ++N I+G + +++
Sbjct: 306 QNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKIS 365
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA ++EM G P ++++ +++ YC++ + +M+ G P+ VTY T++
Sbjct: 366 EAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLI 425
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
+ K+G+ EA R ++M K DS N ++ TL R +++EA Y + G
Sbjct: 426 NGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEA-YKLLSSARKRGY 484
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
D ++ T+I + G+ ++A + +EM K + P+ T++ ++ + GKT++ +
Sbjct: 485 FIDEVSYGTLIVGYFKDGNVDRALKLWDEM-KEKEIIPSTVTYNCIIGGLCQCGKTEQAI 543
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
S+L ++++ L D TTY ++HG CR E A+ +M+ + P TC ++L
Sbjct: 544 SKL-NELLESGLLP-DETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLR 601
Query: 495 EVKQKHMYDAAEKI 508
+ + M + A K+
Sbjct: 602 GLCMEGMLEKALKL 615
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 176/367 (47%), Gaps = 40/367 (10%)
Query: 163 GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELA 222
G + +NT V+ + +++DAV + +G + + T N +LD LCK+G++ A
Sbjct: 203 GIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDA 262
Query: 223 RSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQS 281
R + +++KS + PN +T+NI ++G+CK+ + EA I+ M + P V +Y+ +I
Sbjct: 263 RDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLING 322
Query: 282 YCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPD 341
C + + ++L DEM+ P+VV+Y T+++ + EA ++ E+M G KP+
Sbjct: 323 LCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPN 382
Query: 342 SRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVL 401
+ N ++ + ++ +A +M E+G +PD T+NT+I + G+ +AF +
Sbjct: 383 AVTHNIMVKWYCKEGKMDDASNTI-TKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTM 441
Query: 402 EEMNKLEHCKPNVQTFHPLLKSC-----------------------------------FK 426
+EM + ++ K + T + +L++ FK
Sbjct: 442 DEMGR-KNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFK 500
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
G D L +L D+M K + + TY +I GLC+ K E A E++ + P
Sbjct: 501 DGNVDRAL-KLWDEMKEKEIIPSTV-TYNCIIGGLCQCGKTEQAISKLNELLESGLLPDE 558
Query: 487 QTCRLIL 493
T IL
Sbjct: 559 TTYNTIL 565
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 197/384 (51%), Gaps = 18/384 (4%)
Query: 137 YEMMVDIL---GKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWE---DAVR 189
Y M+++ L G++ + ++R +E + +V+ NT+ +G +W +A +
Sbjct: 316 YNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTL------INGCLEWSKISEAFK 369
Query: 190 TFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWC 248
+E+ G++ N T N+++ CKEGK++ A + +++ S P+ T+N I+G+C
Sbjct: 370 LLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYC 429
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
K + EA T+ EM ++ +TI+++ CR+ + Y+LL + +G + V
Sbjct: 430 KAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEV 489
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
+Y T++ K G+ + A+++ ++MK P + +NC+I L + + ++A+ E
Sbjct: 490 SYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLN-E 548
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
+ E+G+ PD +T+NT++ + G EKAF +M + KP+V T + LL+ G
Sbjct: 549 LLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVE-NSFKPDVFTCNILLRGLCMEG 607
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
++ L +L + V+K ++D TY +I LC+ + + A+ L EM ++ P + T
Sbjct: 608 MLEKAL-KLFNTWVSKGK-AIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYT 665
Query: 489 CRLILDEVKQKHMYDAAEKIEAVM 512
I+ + AE+ + M
Sbjct: 666 YNAIITALTDSGRIREAEEFMSKM 689
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 166/339 (48%), Gaps = 9/339 (2%)
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK---EGKVELARSVFLE-LKSCIPPN 236
+GQ A + F ++ L N T N LL++L + V +R F + +K I PN
Sbjct: 148 SGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPN 207
Query: 237 AHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLD 296
+TFNI I+G+C N+ +A + M + C P ++Y+TI+ + C++ +LL
Sbjct: 208 VNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLM 267
Query: 297 EMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRAS 356
+M+++G PN TY ++ K G +EA + E M PD +N LI L
Sbjct: 268 DMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEG 327
Query: 357 RVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQT 416
R++EA + + EM + PD ++NT+I +AF +LEEM++ + KPN T
Sbjct: 328 RIEEA-FKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSE-KGVKPNAVT 385
Query: 417 FHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKE 476
+ ++K K GK D+ + + + + S D TY +I+G C+A A+ E
Sbjct: 386 HNIMVKWYCKEGKMDDASNTITK--MEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDE 443
Query: 477 MIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEAVMKK 514
M ++ T IL + ++K + +A + + + K+
Sbjct: 444 MGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKR 482
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 117/235 (49%), Gaps = 3/235 (1%)
Query: 144 LGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKN 202
L + +++++ LL K G+ + + ++ + G + A++ +DE+ + +
Sbjct: 463 LCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPS 522
Query: 203 TETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQ 261
T T N ++ LC+ GK E A S EL +S + P+ T+N +HG+C+ V++A
Sbjct: 523 TVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHN 582
Query: 262 EMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSG 321
+M + P V + + +++ C + K +L + ++G + VTY T+++ L K G
Sbjct: 583 KMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEG 642
Query: 322 DFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
++A + +M+ PD +N +I L + R++EA + +M E G P
Sbjct: 643 RLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREA-EEFMSKMLEKGXLP 696
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 99/214 (46%), Gaps = 6/214 (2%)
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
P + T + +Y+ +SG A +I +KMK + +P+ N L+ +L R +
Sbjct: 133 PSKALLDTAIGAYV-QSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSF 191
Query: 364 VYQV--EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLL 421
+ + + G+ P+ +TFN +I + + A L M K +C P+ T++ +L
Sbjct: 192 SREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKY-NCSPDNVTYNTIL 250
Query: 422 KSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHD 481
+ K G+ + L+D + L + TY ++++G C+ + A + + M ++
Sbjct: 251 DALCKKGRLGDARDLLMD--MKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNN 308
Query: 482 ITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
+ P T ++++ + + + A K+ M+ L
Sbjct: 309 LLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENL 342
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 79/188 (42%), Gaps = 27/188 (14%)
Query: 156 LLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK 215
++E K + T N + +R G E A++ F+ + G +T T N L+ +LCK
Sbjct: 584 MVENSFKPDVFTCNIL---LRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCK 640
Query: 216 EGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPC--- 271
EG+++ A ++ E++ + P+ +T+N I R+ EA+ + +M G P
Sbjct: 641 EGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVL 700
Query: 272 --------------------VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
++YS I+ C + + + E + +G + TY
Sbjct: 701 QLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYI 760
Query: 312 TVMSYLAK 319
+M L K
Sbjct: 761 NLMDGLIK 768
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 92/230 (40%), Gaps = 29/230 (12%)
Query: 145 GKVRQ-MDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNT 203
GK Q + ++ LLE T NTI + + G E A + +++ + +
Sbjct: 537 GKTEQAISKLNELLESGLLPDETTYNTI---LHGYCREGDVEKAFQFHNKMVENSFKPDV 593
Query: 204 ETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQE 262
T N+LL LC EG +E A +F + + T+N I CK R+D+A + E
Sbjct: 594 FTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSE 653
Query: 263 MKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP----------------- 305
M+ P +Y+ II + + E + +M +G P
Sbjct: 654 MEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVLQLDXNETVVTSET 713
Query: 306 ------NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPD-SRFFNCL 348
+ V Y+ + L G +++A+RI + K G D S + N +
Sbjct: 714 SEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLM 763
>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 178/371 (47%), Gaps = 12/371 (3%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQW 184
G H+ ++++ L ++ + ++L +M K I VT T+ + G+
Sbjct: 116 GVAHNDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTL---INGLCNEGRI 172
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIF 243
++AV F+E+ NT T +L+D LCK+G V AR VF + + + PN +T+N
Sbjct: 173 KEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNAL 232
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
++G+C +++A + M G GC P V SYS +I YC+ + LL +M +
Sbjct: 233 MNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKEL 292
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
PN VTY T+M L + EA + +KM G P+ R ++ L+ L + ++EA+
Sbjct: 293 IPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALK 352
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
+ M E + PD +N +I G E A + ++ +P+V+T++ ++K
Sbjct: 353 LL-TSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFA-NGIRPSVRTYNIMIKG 410
Query: 424 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
K G +DE +L M + L D +Y ++I G + A L EM+G +
Sbjct: 411 LLKEGLSDEAY-KLFRKMEDDGFLP-DSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFS 468
Query: 484 PRYQTCRLILD 494
T +++LD
Sbjct: 469 ADSSTFKMLLD 479
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 165/339 (48%), Gaps = 5/339 (1%)
Query: 171 IAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL- 229
+ K + + Q+ V +++ FG+ N T+N+L+++LC+ + A SV ++
Sbjct: 89 LGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILINSLCRLSHIHFAVSVLSKMF 148
Query: 230 KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFS 289
K I P++ TF I+G C R+ EA EM G P ++++ ++ C++ S
Sbjct: 149 KLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVS 208
Query: 290 KVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
+ + + M +G PN+ TY +M+ + +A ++ E M G P ++ LI
Sbjct: 209 EARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILI 268
Query: 350 YTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH 409
++ R+ EA + +M E + P+T T+NT++ H +A + ++M
Sbjct: 269 NGYCKSRRIDEAKALL-TQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCS-SG 326
Query: 410 CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEW 469
PN++T+ LL K G +E L +LL M + L DI Y ++I G+ A K E
Sbjct: 327 MLPNLRTYSILLDGLCKHGHLEEAL-KLLTSM-QERKLEPDIVLYNILIQGMFIAGKLEV 384
Query: 470 AYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
A LF ++ + I P +T +++ + ++ + D A K+
Sbjct: 385 AKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKL 423
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 118/242 (48%), Gaps = 5/242 (2%)
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
+ + +I S CR + +L +M G P+ VT+TT+++ L G +EA+ + +M
Sbjct: 123 TLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEM 182
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
+ P++ F L+ L + V EA V++ M E GV P+ T+N ++ +
Sbjct: 183 AGRDAMPNTVTFTILVDVLCKKGMVSEARCVFET-MTEKGVEPNIYTYNALMNGYCLRLE 241
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
A V E M + C P+V ++ L+ K+ + DE LL M K L + T
Sbjct: 242 MNDASKVFEIMVG-KGCAPSVHSYSILINGYCKSRRIDEA-KALLTQMSEKE-LIPNTVT 298
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEAVM 512
Y ++ GLC A+ A LFK+M + P +T ++LD + K H+ +A + + ++
Sbjct: 299 YNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQ 358
Query: 513 KK 514
++
Sbjct: 359 ER 360
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 110/237 (46%), Gaps = 6/237 (2%)
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
+D+A + M P + + S ++ +S V L ++M G N T
Sbjct: 67 IDDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNI 126
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN 372
+++ L + A+ + KM +G +PDS F LI L R++EAV ++ EM
Sbjct: 127 LINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFN-EMAGR 185
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS-CFKTGKTD 431
P+T TF ++ + G +A V E M + + +PN+ T++ L+ C + D
Sbjct: 186 DAMPNTVTFTILVDVLCKKGMVSEARCVFETMTE-KGVEPNIYTYNALMNGYCLRLEMND 244
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
S++ + MV K + + +Y+++I+G C++ + + A L +M ++ P T
Sbjct: 245 A--SKVFEIMVGK-GCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVT 298
>gi|356557763|ref|XP_003547180.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g14820, mitochondrial-like [Glycine max]
Length = 492
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 162/329 (49%), Gaps = 10/329 (3%)
Query: 95 AIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMR 154
++ SH LV ++ RFK A F WAG PG++H S Y M+ +LG+ RQ + M
Sbjct: 91 GVRLSHDLVVDMLQRFKH-AXPAFRFFCWAGKRPGFDHDSRTYNCMMCVLGRTRQFETMV 149
Query: 155 ALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLC 214
A+LEEM + ++T+ T + ++ F+ A Q + A FD + + + + +N LLD+L
Sbjct: 150 AMLEEMGEMGLLTMETFSVAIKTFAEANQRKKAAGIFDLMKKYEFKVGVDVINFLLDSLS 209
Query: 215 -----KEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGC 268
KE + + V+ E+ P+ N+ + G K + D A + MK
Sbjct: 210 AAKLGKEAQAVFEKRVWNEMIDRGFKPDIVAHNVMLEGLLKCKKSD-AXKLFEIMKAKCP 268
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
P V SY+ +IQ +C+Q +V E +DEM + C P+ YT +++ +
Sbjct: 269 SPNVRSYTIMIQDFCKQKMMGEVVEYIDEMVDRECQPDAALYTCLITGFGXKKKMDMVYN 328
Query: 329 ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF 388
+ ++M+ G PD +N LI +AV +Y+ +M ++G+ P T+N ++ +
Sbjct: 329 LLKEMRKRGCSPDGGTYNALIKLXTSQQMPDDAVRIYK-KMSQSGIKPTIHTYNMIMRSY 387
Query: 389 SHHGHHEKAFHVLEEMNKLEHCKPNVQTF 417
++E + + M++ + C P+ ++
Sbjct: 388 FVTKNYEIGHAIWDXMHQ-KGCCPDDNSY 415
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 103/251 (41%), Gaps = 22/251 (8%)
Query: 264 KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF 323
+ + C CV+ R F + +L+EM G + T++ + A++
Sbjct: 130 RTYNCMMCVLG---------RTRQFETMVAMLEEMGEMGLL-TMETFSVAIKTFAEANQR 179
Query: 324 EEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV----EMPENGVAPDTS 379
++A I + MK K N L+ +L A +EA V++ EM + G PD
Sbjct: 180 KKAAGIFDLMKKYEFKVGVDVINFLLDSLSAAKLGKEAQAVFEKRVWNEMIDRGFKPDIV 239
Query: 380 TFNTMIT--MFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
N M+ + K F ++ K + PNV+++ +++ K E + +
Sbjct: 240 AHNVMLEGLLKCKKSDAXKLFEIM----KAKCPSPNVRSYTIMIQDFCKQKMMGEVV-EY 294
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVK 497
+D+MV++ D YT +I G K + Y L KEM +P T ++
Sbjct: 295 IDEMVDRE-CQPDAALYTCLITGFGXKKKMDMVYNLLKEMRKRGCSPDGGTYNALIKLXT 353
Query: 498 QKHMYDAAEKI 508
+ M D A +I
Sbjct: 354 SQQMPDDAVRI 364
>gi|255660862|gb|ACU25600.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
Length = 484
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 194/390 (49%), Gaps = 16/390 (4%)
Query: 100 HYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEE 159
H LV ++H K + AL FRW +EH+ E + +++ILG+ +++ R +L +
Sbjct: 12 HELVYNVLHSSKTS-EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLD 70
Query: 160 M-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
M KG + ++ + G +++V+ F ++ G+E+ ++ N L + + G+
Sbjct: 71 MPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGR 130
Query: 219 VELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
+A+ F ++ S I P HTFN+ I G+ +V+ A ++MK P V++Y+T
Sbjct: 131 YMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNT 190
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+I Y R + + EM+ + P VVTYTT++ ++A+R+ E+MK G
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFG 250
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP-DTSTFNTMITMFSHHGHHEK 396
KP++ ++ L+ L A ++ EA + + EM + +AP D S +I+ G+ +
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMSEARVILK-EMMDKYLAPTDNSIIMRLISSHCKSGNLDA 309
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCF-KTGKTDECLSQLLDDMVNK-------HHLS 448
A VL+ M +L P + LL F K G+ D+ + +LLD ++ K L
Sbjct: 310 AADVLKAMIRL--SVPTEAGHYGLLIENFCKAGQYDKAV-KLLDKLIEKDIILRPQSTLH 366
Query: 449 LDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
L+ + Y +I LC + A L ++++
Sbjct: 367 LEPSAYNSMIEYLCNNGQASKAETLVRQLM 396
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 133/311 (42%), Gaps = 4/311 (1%)
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQ 257
E N ET +++ L + K+ AR + L++ K + + + + I + K V E+
Sbjct: 41 FEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESV 100
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
Q+M+ G + SY+ + + R+ + ++M ++G P T+ ++
Sbjct: 101 KMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGF 160
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
SG E A R E MK PD +N +I R +++EA Y VEM + P
Sbjct: 161 FLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEK-YFVEMKGRNIEPT 219
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
T+ T+I + + A ++EEM KPN T+ LL K E +
Sbjct: 220 VVTYTTLIKGYVSVDQVDDALRLVEEMKGF-GIKPNAITYSTLLPGLCNAEKMSEA-RVI 277
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVK 497
L +M++K+ D + +I C++ + A + K MI + L+++
Sbjct: 278 LKEMMDKYLAPTDNSIIMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGLLIENFC 337
Query: 498 QKHMYDAAEKI 508
+ YD A K+
Sbjct: 338 KAGQYDKAVKL 348
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 127/267 (47%), Gaps = 6/267 (2%)
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
+ ++++ A+ + +M G + +I SY ++ + ++ +M+ G +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIK 116
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
+Y + + + G + A R KM G +P FN +I+ + +V+ A ++ +
Sbjct: 117 SYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFE-D 175
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M ++PD T+NTMI + E+A EM K + +P V T+ L+K
Sbjct: 176 MKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEM-KGRNIEPTVVTYTTLIKGYVSVD 234
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ D+ L +L+++M + + TY+ ++ GLC A K A ++ KEM+ + P +
Sbjct: 235 QVDDAL-RLVEEM-KGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNS 292
Query: 489 C--RLILDEVKQKHMYDAAEKIEAVMK 513
RLI K ++ AA+ ++A+++
Sbjct: 293 IIMRLISSHCKSGNLDAAADVLKAMIR 319
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 5/205 (2%)
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N T+ ++ L ++ A I M G + D + +I + G+ VQE+V ++
Sbjct: 44 NRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMF 103
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
Q +M E GV ++N + + G + A +M E +P TF+ ++ F
Sbjct: 104 Q-KMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLS-EGIEPTRHTFNVMIWGFF 161
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
+GK E ++ +DM ++ +S D+ TY +I+G R K E A F EM G +I P
Sbjct: 162 LSGKV-ETANRFFEDMKSRE-ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPT 219
Query: 486 YQT-CRLILDEVKQKHMYDAAEKIE 509
T LI V + DA +E
Sbjct: 220 VVTYTTLIKGYVSVDQVDDALRLVE 244
>gi|224064580|ref|XP_002301519.1| predicted protein [Populus trichocarpa]
gi|222843245|gb|EEE80792.1| predicted protein [Populus trichocarpa]
Length = 718
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 175/359 (48%), Gaps = 9/359 (2%)
Query: 140 MVDILGKVRQMDQMRALLEE-MSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
M+ LG++ +++ + + + +++G+ T+ + ++ + +G +A++ F + +G
Sbjct: 83 MISTLGRLGKVEMAKTVFKAALTEGYGNTVYAFSAIISAYGRSGYCNEAIKIFYSMKDYG 142
Query: 199 LEKNTETMNLLLDTLCKEGKVELAR--SVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDE 255
L+ N T N ++D C +G VE R +F E L++ + P+ TFN + K +
Sbjct: 143 LKPNLVTYNAVIDA-CGKGGVEFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEA 201
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
A+ EM G + +Y+T++ + C+ +E++ EM A+ PNVVTY+T++
Sbjct: 202 ARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMID 261
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
AK+G ++A + +MK +G D +N L+ + R +EA+ V + EM +G+
Sbjct: 262 GYAKAGRLDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCR-EMENSGIR 320
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS 435
D T+N ++ + ++ V EEM K H PN+ T+ L+ K G E +
Sbjct: 321 KDVVTYNALLGGYGKQYKYDVVRKVFEEM-KARHVSPNLLTYSTLIDVYSKGGLYREAMD 379
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
+ K L D+ Y+ +I LC+ E A L EM I P T I+D
Sbjct: 380 VFRE--FKKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 436
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 114/482 (23%), Positives = 208/482 (43%), Gaps = 50/482 (10%)
Query: 33 SHIVSSSPIESYCSDGARLDHHQVLCVDSPRLPDIDVIISKVHVGSSEDEVFQSLKQDHV 92
S I+S+ YC++ ++ + P L + +I G E + + + +
Sbjct: 116 SAIISAYGRSGYCNEAIKIFYSMKDYGLKPNLVTYNAVIDACGKGGVEFKRVLEIFDEML 175
Query: 93 CNAIQPSHYLVNKLIHRFKDD--WKSALGIFRWAGSCP----GYEHSSEIYEMMVDILGK 146
N +QP N L+ W++A + SC G + Y ++D + K
Sbjct: 176 RNGMQPDRITFNSLLAVCSKGGLWEAARSL-----SCEMVNRGIDQDIFTYNTLLDAVCK 230
Query: 147 VRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTET 205
Q+D ++ EM +I+ + T + ++ ++ AG+ +DA F+E+ G+ + +
Sbjct: 231 GGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLGISLDRVS 290
Query: 206 MNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
N LL K G+ E A V E++ S I + T+N + G+ K + D + +EMK
Sbjct: 291 YNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMK 350
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
P +++YST+I Y + + + ++ E + G +VV Y+ ++ L K+G E
Sbjct: 351 ARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDALCKNGLVE 410
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV------YVYQVE-MPENGVAPD 377
A+ + ++M G +P+ +N +I GR + + V Q++ + + V
Sbjct: 411 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRPATTESVVDDAGQTSELQIDSLSSSAVEKA 470
Query: 378 TSTF------NTMITMFSHHGHHEKA-------------FHVLEEMNKLEHCKPNVQTFH 418
T + N +I +F + V +M++LE KPNV TF
Sbjct: 471 TKSLVADREDNRIIKIFGQLAAEKAGQAKNSGGQEMMCILGVFHKMHELE-IKPNVVTFS 529
Query: 419 PLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC---RANKCEWAYLLFK 475
+L +C + +E S LL+++ D Y V HGL R N E A LF
Sbjct: 530 AILNACSRCNSFEEA-SMLLEEL-----RLFDNQVYG-VAHGLLMGYRENVWEQAQSLFD 582
Query: 476 EM 477
E+
Sbjct: 583 EV 584
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 147/308 (47%), Gaps = 6/308 (1%)
Query: 209 LLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG 267
++ TL + GKVE+A++VF L + F+ I + + +EA MK +G
Sbjct: 83 MISTLGRLGKVEMAKTVFKAALTEGYGNTVYAFSAIISAYGRSGYCNEAIKIFYSMKDYG 142
Query: 268 CHPCVISYSTIIQSYCRQ-YNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
P +++Y+ +I + + F +V E+ DEM G P+ +T+ ++++ +K G +E A
Sbjct: 143 LKPNLVTYNAVIDACGKGGVEFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAA 202
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
++ +M G D +N L+ + + ++ A + EMP + P+ T++TMI
Sbjct: 203 RSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMS-EMPAKNILPNVVTYSTMID 261
Query: 387 MFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHH 446
++ G + A ++ EM L V +++ LL K G+ +E + + +M N
Sbjct: 262 GYAKAGRLDDARNLFNEMKFLGISLDRV-SYNTLLSIYAKLGRFEEAM-DVCREMEN-SG 318
Query: 447 LSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAE 506
+ D+ TY ++ G + K + +F+EM ++P T ++D + +Y A
Sbjct: 319 IRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAM 378
Query: 507 KIEAVMKK 514
+ KK
Sbjct: 379 DVFREFKK 386
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 92/206 (44%), Gaps = 5/206 (2%)
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
+ ++S L + G E A + + G F+ +I GR+ EA+ ++ M
Sbjct: 81 SAMISTLGRLGKVEMAKTVFKAALTEGYGNTVYAFSAIISAYGRSGYCNEAIKIF-YSMK 139
Query: 371 ENGVAPDTSTFNTMITMFSHHG-HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
+ G+ P+ T+N +I G ++ + +EM + +P+ TF+ LL C K G
Sbjct: 140 DYGLKPNLVTYNAVIDACGKGGVEFKRVLEIFDEMLR-NGMQPDRITFNSLLAVCSKGGL 198
Query: 430 TDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTC 489
E L +MVN+ + DI TY ++ +C+ + + A+ + EM +I P T
Sbjct: 199 W-EAARSLSCEMVNRG-IDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTY 256
Query: 490 RLILDEVKQKHMYDAAEKIEAVMKKL 515
++D + D A + MK L
Sbjct: 257 STMIDGYAKAGRLDDARNLFNEMKFL 282
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 122/284 (42%), Gaps = 45/284 (15%)
Query: 82 EVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDD--WKSALGIFRWAGSCPGYEHSSEIYEM 139
+VF+ +K HV P+ + LI + ++ A+ +FR G + +Y
Sbjct: 344 KVFEEMKARHV----SPNLLTYSTLIDVYSKGGLYREAMDVFREFKK-AGLKADVVLYSA 398
Query: 140 MVDILGKVRQMDQMRALLEEMSKG----HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
++D L K ++ +LL+EM+K ++VT N+I + F E V D+ G
Sbjct: 399 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI---IDAFGRPATTESVV---DDAG 452
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDE 255
+T L +D+L VE A KS + I I G + +
Sbjct: 453 --------QTSELQIDSLSSSA-VEKAT------KSLVADREDNRIIKIFGQLAAEKAGQ 497
Query: 256 AQWTI-QEMK-----GHGCH-----PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
A+ + QEM H H P V+++S I+ + R +F + LL+E++
Sbjct: 498 AKNSGGQEMMCILGVFHKMHELEIKPNVVTFSAILNACSRCNSFEEASMLLEELRLFDNQ 557
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
V + +M Y + +E+A + +++K++ S S F+N L
Sbjct: 558 VYGVAHGLLMGY--RENVWEQAQSLFDEVKLMDSSTASAFYNAL 599
>gi|255660876|gb|ACU25607.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 484
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 193/390 (49%), Gaps = 16/390 (4%)
Query: 100 HYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEE 159
H LV ++H + + AL FRW +EH+ E + +++ILG+ +++ R +L +
Sbjct: 12 HELVYNVLHS-SNTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLD 70
Query: 160 M-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
M KG + ++ + G +++V+ F ++ G+E+ ++ N L + + G+
Sbjct: 71 MPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGR 130
Query: 219 VELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
+A+ F + L I P HTFN+ I G+ +V+ A ++MK P V++Y+T
Sbjct: 131 YMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNT 190
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+I Y R + + EM+ + P VVTYTT++ ++A+R+ E+MK G
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGSG 250
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP-DTSTFNTMITMFSHHGHHEK 396
KP++ ++ L+ L A ++ EA + + EM + +AP D S F +I+ G+ +
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMSEARVILK-EMMDKYLAPTDNSIFMRLISSHCKSGNLDA 309
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCF-KTGKTDECLSQLLDDMVNK-------HHLS 448
A VL+ M +L P + LL F K G+ D+ + +LLD ++ K L
Sbjct: 310 AADVLKAMIRL--SVPTEAGHYGLLIEKFCKAGQYDKAV-KLLDKLIEKDIILRPQSTLH 366
Query: 449 LDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
L+ Y +I LC + A L ++++
Sbjct: 367 LEPNAYNPMIEYLCNNGQASKAETLVRQLM 396
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 136/311 (43%), Gaps = 4/311 (1%)
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQ 257
E N ET +++ L + K+ AR + L++ K + + + + I + K V E+
Sbjct: 41 FEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESV 100
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
Q+M+ G + SY+ + + R+ + ++M ++G P T+ ++
Sbjct: 101 KMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGF 160
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
SG E A R E MK PD +N +I R +++EA Y VEM + P
Sbjct: 161 FLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEK-YFVEMKGRNIEPT 219
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
T+ T+I + + A ++EEM K KPN T+ LL K E +
Sbjct: 220 VVTYTTLIKGYVSVDQVDDALRLVEEM-KGSGIKPNAITYSTLLPGLCNAEKMSEA-RVI 277
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVK 497
L +M++K+ D + + +I C++ + A + K MI + L++++
Sbjct: 278 LKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGLLIEKFC 337
Query: 498 QKHMYDAAEKI 508
+ YD A K+
Sbjct: 338 KAGQYDKAVKL 348
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 127/267 (47%), Gaps = 6/267 (2%)
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
+ ++++ A+ + +M G + +I SY ++ + ++ +M+ G +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIK 116
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
+Y + + + G + A R KM G +P FN +I+ + +V+ A ++ +
Sbjct: 117 SYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFE-D 175
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M ++PD T+NTMI + E+A EM K + +P V T+ L+K
Sbjct: 176 MKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEM-KGRNIEPTVVTYTTLIKGYVSVD 234
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ D+ L +L+++M + + TY+ ++ GLC A K A ++ KEM+ + P +
Sbjct: 235 QVDDAL-RLVEEM-KGSGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNS 292
Query: 489 C--RLILDEVKQKHMYDAAEKIEAVMK 513
RLI K ++ AA+ ++A+++
Sbjct: 293 IFMRLISSHCKSGNLDAAADVLKAMIR 319
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 5/205 (2%)
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N T+ ++ L ++ A I M G + D + +I + G+ VQE+V ++
Sbjct: 44 NRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMF 103
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
Q +M E GV ++N + + G + A +M E +P TF+ ++ F
Sbjct: 104 Q-KMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLS-EGIEPTRHTFNVMIWGFF 161
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
+GK E ++ +DM ++ +S D+ TY +I+G R K E A F EM G +I P
Sbjct: 162 LSGKV-ETANRFFEDMKSRE-ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPT 219
Query: 486 YQT-CRLILDEVKQKHMYDAAEKIE 509
T LI V + DA +E
Sbjct: 220 VVTYTTLIKGYVSVDQVDDALRLVE 244
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 184/385 (47%), Gaps = 10/385 (2%)
Query: 95 AIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMR 154
A+QP H + R+++D +AL +F + G++H+ E Y+ M++ LG + + M
Sbjct: 4 ALQPKHVAA---VIRYQNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAME 60
Query: 155 ALLEEMSKGHIVTL--NTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDT 212
+L EM K + +MR + G+ ++AV F+ + + E + ++ N +++
Sbjct: 61 DVLAEMRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNI 120
Query: 213 LCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPC 271
L + G A V++ +K I P+ +T I + +C R A + M G GC
Sbjct: 121 LVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFN 180
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
+SY +I + ++ + Y L DEM QG P+++T+ ++ L K G+ +E+ ++
Sbjct: 181 AVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFS 240
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHH 391
K+ G P+ FN I L R + EA + + + E G+ PD ++NT+I F H
Sbjct: 241 KVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSE-GLTPDVISYNTLICGFCKH 299
Query: 392 GHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDI 451
+A L +M +PN T++ ++ K G ++L D + K + D
Sbjct: 300 SKLVEAECYLHKMVN-SGVEPNEFTYNTIINGFCKAGMMQNA-DKILRDAMFKGFIP-DE 356
Query: 452 TTYTLVIHGLCRANKCEWAYLLFKE 476
TY+ +I+GLC A +F E
Sbjct: 357 FTYSSLINGLCNDGDMNRAMAVFYE 381
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 166/335 (49%), Gaps = 14/335 (4%)
Query: 186 DAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFI 244
+A FDE+ G+ + T N L+ LCK+G V+ + +F + +K + PN TFNIFI
Sbjct: 199 EAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFI 258
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
G C+ +DEA ++ + G P VISY+T+I +C+ + L +M G
Sbjct: 259 QGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVE 318
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
PN TY T+++ K+G + A +I G PD ++ LI L + A+ V
Sbjct: 319 PNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAV 378
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH-CKPNVQTFHPLLKS 423
+ E E G +NT++ S G +A ++++M +EH C P++ T++ ++
Sbjct: 379 F-YEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDM--MEHGCSPDIWTYNLVVNG 435
Query: 424 CFKTGKTDECLSQ---LLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH 480
K G CLS +L+D + K + DI T+ +I G C+ + A + M+ H
Sbjct: 436 LCKMG----CLSDANGILNDAIAKGCIP-DIFTFNTLIDGYCKQRNMDKAIEILDTMLSH 490
Query: 481 DITPRYQTCRLILDEV-KQKHMYDAAEKIEAVMKK 514
ITP T +L+ + K + + + + +A+++K
Sbjct: 491 GITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEK 525
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 170/369 (46%), Gaps = 7/369 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEE-MSKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G E + Y +++ K M +L + M KG I T + ++ G A
Sbjct: 316 GVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRA 375
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHG 246
+ F E G + + N L+ L K+G V A + ++ + P+ T+N+ ++G
Sbjct: 376 MAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNG 435
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
CK+ + +A + + GC P + +++T+I YC+Q N K E+LD M + G P+
Sbjct: 436 LCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPD 495
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
V+TY T+++ L K+ + + + M G P+ +N LI + + +V EA+ +++
Sbjct: 496 VITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFK 555
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS-CF 425
EM G+ PD T T+I +G +KA+ + + K + F+ ++ + C
Sbjct: 556 -EMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCX 614
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
K + +++ L + + D TY ++I C+ + A+ E I + P
Sbjct: 615 KLNVS---MAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPS 671
Query: 486 YQTCRLILD 494
+ TC +L+
Sbjct: 672 FTTCGKVLN 680
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 165/360 (45%), Gaps = 9/360 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEE-MSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
+ ++ +L K + + L + M +G L T ++ G ++A R + +
Sbjct: 219 FNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIV 278
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
+ GL + + N L+ CK K+ A ++ S + PN T+N I+G+CK +
Sbjct: 279 SEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQ 338
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
A +++ G P +YS++I C + ++ + E +G +++ Y T++
Sbjct: 339 NADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLV 398
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
L+K G +A+++ + M G PD +N ++ L + + +A + + + G
Sbjct: 399 KGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAK-GC 457
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH-CKPNVQTFHPLLKSCFKTGKTDEC 433
PD TFNT+I + + +KA +L+ M L H P+V T++ LL K K D
Sbjct: 458 IPDIFTFNTLIDGYCKQRNMDKAIEILDTM--LSHGITPDVITYNTLLNGLCKARKLDNV 515
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT-CRLI 492
+ M+ K + +I TY ++I C+ K A LFKEM +TP T C LI
Sbjct: 516 VDTF-KAMLEKG-CTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLI 573
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 100/211 (47%), Gaps = 9/211 (4%)
Query: 137 YEMMVDILGKVRQMDQM----RALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y +++ L K R++D + +A+LE+ +I+T N + + F + +A+ F
Sbjct: 499 YNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNIL---IESFCKDRKVSEAMELFK 555
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHT--FNIFIHGWCKI 250
E+ T GL + T+ L+ LC G+++ A +F+ ++ + T FNI I+ +C
Sbjct: 556 EMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXK 615
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
V A+ +M G C P +Y +I SYC+ N + L E ++G P+ T
Sbjct: 616 LNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTC 675
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPD 341
V++ L + EA+ I M G P+
Sbjct: 676 GKVLNCLCVTHRLSEAVVIINLMVQNGIVPE 706
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 6/208 (2%)
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKM-KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
TY ++ L G FE + +M K V SK + ++ GR +VQEAV V++
Sbjct: 42 TYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFE- 100
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKT 427
M P ++N ++ + +G+ +A V M + P+V T +KS T
Sbjct: 101 RMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDI-GIYPDVYTHTIRMKSFCIT 159
Query: 428 GKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
G+ L +LL++M + + +Y VI G + N AY LF EM+ I P
Sbjct: 160 GRPTAAL-RLLNNMPGQG-CEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDIL 217
Query: 488 TCRLILDEVKQKHMYDAAEKI-EAVMKK 514
T ++ + +K +EK+ VMK+
Sbjct: 218 TFNKLIHVLCKKGNVQESEKLFSKVMKR 245
>gi|11120809|gb|AAG30989.1|AC012396_25 hypothetical protein [Arabidopsis thaliana]
Length = 466
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/425 (24%), Positives = 197/425 (46%), Gaps = 17/425 (4%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILG----KVRQMDQMRALL 157
+V K++ R + + K+A F WAG Y H Y M+DIL K +Q + +L
Sbjct: 25 VVCKILQRLQYEEKTAFRFFTWAGHQEHYSHEPIAYNEMIDILSSTKYKNKQFRIVIDML 84
Query: 158 EEMSKGH--IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTE--TMNLLLDTL 213
+ M + + +V ++ + +++R++ ++ V+ F + ++ E N+LLD L
Sbjct: 85 DYMKRNNKTVVLVDVLLEILRKY--CERYLTHVQKFAKRKRIRVKTQPEINAFNMLLDAL 142
Query: 214 CKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI 273
CK G V+ ++ ++ + P+A+TFN+ GWC++ +A ++EM G P
Sbjct: 143 CKCGLVKEGEALLRRMRHRVKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENF 202
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQG---CPPNVVTYTTVMSYLAKSGDFEEAIRIT 330
+Y I ++C+ + +L D M +G P T+ ++ LAK+ EE +
Sbjct: 203 TYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELI 262
Query: 331 EKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSH 390
+M G PD + +I + A +V EA Y + EM G PD T+N + +
Sbjct: 263 GRMISTGCLPDVSTYKDVIEGMCMAEKVDEA-YKFLDEMSNKGYPPDIVTYNCFLRVLCE 321
Query: 391 HGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLD 450
+ ++A + M + C P+VQT++ L+ F+ D + + ++K D
Sbjct: 322 NRKTDEALKLYGRMVE-SRCAPSVQTYNMLISMFFEMDDPDGAFNTWTE--MDKRDCVQD 378
Query: 451 ITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEA 510
+ TY +I+GL ++ + A L +E++ + Y+ L + + A K+
Sbjct: 379 VETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVGNLKAIHKVSE 438
Query: 511 VMKKL 515
MKK
Sbjct: 439 HMKKF 443
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/289 (20%), Positives = 114/289 (39%), Gaps = 24/289 (8%)
Query: 93 CNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSC-----------------PGYEHSSE 135
C ++ L+ ++ HR K D + +F G C G++ +
Sbjct: 145 CGLVKEGEALLRRMRHRVKPDANTFNVLF--FGWCRVRDPKKAMKLLEEMIEAGHKPENF 202
Query: 136 IYEMMVDILGKVRQMDQMRALLEEM-SKGHIV---TLNTIAKVMRRFSGAGQWEDAVRTF 191
Y +D + +D+ L + M +KG V T T A ++ + + E+
Sbjct: 203 TYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELI 262
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKI 250
+ + G + T +++ +C KV+ A E+ + PP+ T+N F+ C+
Sbjct: 263 GRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCEN 322
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
+ DEA M C P V +Y+ +I + + + EM + C +V TY
Sbjct: 323 RKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETY 382
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
+++ L +EA + E++ G K R F+ + L ++
Sbjct: 383 CAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVGNLK 431
>gi|357114607|ref|XP_003559090.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Brachypodium distachyon]
Length = 486
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 103/436 (23%), Positives = 189/436 (43%), Gaps = 81/436 (18%)
Query: 87 LKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWA-----GSCPGYEHSSEIYEMMV 141
L+ DH + P + +++ R + A F WA G C H+ Y +V
Sbjct: 56 LELDHSDLRVTPD--VAERVLERLDNAGMLAYRFFEWARKQKRGGC---NHTIRSYHTVV 110
Query: 142 DILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEK 201
L K+RQ M ++ M + +V + T +MR+++ A ++++AV TF+ + +G
Sbjct: 111 ASLAKIRQYQLMWDVVAIMRREGVVNVETFGIIMRKYARAQKFDEAVYTFNIMEKYG--- 167
Query: 202 NTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQ 261
+ PN FN + CK V +AQ
Sbjct: 168 -------------------------------VVPNLAAFNSLLGALCKSKNVRKAQEIFD 196
Query: 262 EMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSG 321
+M G +P +YS +++ + + N K+ E+ EM GC P++VTY ++ L K+G
Sbjct: 197 KMNGR-FNPDAKTYSILLEGWGKAPNLPKMREVYSEMLDAGCQPDIVTYGIMVDSLCKTG 255
Query: 322 DFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTF 381
EEA+ + + M G +P + ++ L++T G R+++AV + ++M ++G+ PD +
Sbjct: 256 RVEEAVLVVQDMSSRGCQPTTFIYSVLVHTYGVEMRIEDAVATF-LDMEKDGIVPDVVVY 314
Query: 382 NTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDM 441
N ++T F E AF V+++M PN +T++ +L GK DE ++ M
Sbjct: 315 NALVTAFCKVKKFENAFRVMDDMEG-HGIAPNSRTWNIILNKLISLGKDDEAY-RVFRRM 372
Query: 442 VNKHHLSLD---------------------------------ITTYTLVIHGLCRANKCE 468
+ + D + T++++I+GLC +
Sbjct: 373 IKRCQPDSDTYTMMIKMFCENDNVEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVS 432
Query: 469 WAYLLFKEMIGHDITP 484
A +L ++MI I P
Sbjct: 433 QACVLLEDMIEKGIRP 448
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 102/216 (47%), Gaps = 1/216 (0%)
Query: 126 SCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVM-RRFSGAGQW 184
S G + ++ IY ++V G +++ A +M K IV + + F ++
Sbjct: 268 SSRGCQPTTFIYSVLVHTYGVEMRIEDAVATFLDMEKDGIVPDVVVYNALVTAFCKVKKF 327
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFI 244
E+A R D++ G+ N+ T N++L+ L GK + A VF + P++ T+ + I
Sbjct: 328 ENAFRVMDDMEGHGIAPNSRTWNIILNKLISLGKDDEAYRVFRRMIKRCQPDSDTYTMMI 387
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
+C+ + V+ A + M+ P + ++S +I C + S+ LL++M +G
Sbjct: 388 KMFCENDNVEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIR 447
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
P T+ + L K G + + +KMKI+ +P
Sbjct: 448 PPGSTFGKLRQLLLKEGRKDVLEFLVDKMKILIQEP 483
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 183/389 (47%), Gaps = 7/389 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G + Y ++ L + ++ Q ++ + M S G + + T++ ++ S AG+ A
Sbjct: 86 GLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAA 145
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCI-PPNAHTFNIFIHG 246
VR F + GL N + L+ LCK K++ A + ++K P+ T+N+ I G
Sbjct: 146 VRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDG 205
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKV-YELLDEMQAQGCPP 305
CK V+ A+ EM GC P V +Y+ +I +C+ N + L E GC
Sbjct: 206 LCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTI 265
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
++ TYT ++ +LAK+ EEA+ + EK+ G P +N L+ L + R++EA+ +
Sbjct: 266 DIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLL 325
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
+ ++ +NG PD T+ ++I +A+ + +EM L + + L++
Sbjct: 326 R-KIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEM-ALRGLALDTVCYTALIRELL 383
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
+TGK + S + + H D+ T + +I GL +A + A +FK M + P
Sbjct: 384 QTGKIPQASS--VYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPN 441
Query: 486 YQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
++ + + D A ++ A MKK
Sbjct: 442 EVVYSALIHGLCKARKMDCALEMLAQMKK 470
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 177/375 (47%), Gaps = 7/375 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++D LGK ++ + L +EM+ +G + ++R G+ A + +
Sbjct: 59 YTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMT 118
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVD 254
+ G + T++ ++D L K G++ A +F +++ + PN ++ IHG CK ++D
Sbjct: 119 SHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMD 178
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
A + +MK C P I+Y+ +I C+ + DEM GC P+V TY ++
Sbjct: 179 CALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILI 238
Query: 315 SYLAKSGDFEEAI-RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
S K+G+ + A + ++ I G D + ++ L + +++EAV + + ++ NG
Sbjct: 239 SGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALME-KITANG 297
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
P +T+N ++ G E+A +L ++ C P+V T+ L+ K ++ E
Sbjct: 298 CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVD-NGCTPDVVTYTSLIDGLGKEKRSFEA 356
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
+L +M + L+LD YT +I L + K A ++K M H P T ++
Sbjct: 357 Y-KLFKEMALRG-LALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMI 414
Query: 494 DEVKQKHMYDAAEKI 508
D + + AA +I
Sbjct: 415 DGLSKAGRIGAAVRI 429
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 161/341 (47%), Gaps = 18/341 (5%)
Query: 144 LGKVRQ-MDQMRALLEEMSKGHIVT----LNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
+G++ + +D +R +++ +VT ++ + K R F +A + F E+ G
Sbjct: 34 MGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSF-------EAYKLFKEMALRG 86
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLELKS--CIPPNAHTFNIFIHGWCKINRVDEA 256
L +T L+ L + GK+ A SV+ + S C+P + T + I G K R+ A
Sbjct: 87 LALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVP-DVVTLSTMIDGLSKAGRIGAA 145
Query: 257 QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSY 316
+ M+ G P + YS +I C+ E+L +M+ C P+ +TY ++
Sbjct: 146 VRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDG 205
Query: 317 LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
L KSGD E A ++M G KPD +N LI +A A + E NG
Sbjct: 206 LCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTI 265
Query: 377 DTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQ 436
D T+ ++ + + E+A ++E++ C P + T++ LL K G+ +E +
Sbjct: 266 DIHTYTAIVDWLAKNKKIEEAVALMEKITA-NGCTPTIATYNALLNGLCKMGRLEEAI-D 323
Query: 437 LLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
LL +V+ + + D+ TYT +I GL + + AY LFKEM
Sbjct: 324 LLRKIVD-NGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEM 363
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 116/458 (25%), Positives = 206/458 (44%), Gaps = 64/458 (13%)
Query: 67 IDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIH-----RFKDDWKSALGIF 121
ID + +G++ +F+S++ + P+ + + LIH R D L
Sbjct: 133 IDGLSKAGRIGAAV-RIFKSMEA----RGLAPNEVVYSALIHGLCKARKMDCALEMLAQM 187
Query: 122 RWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM----SKGHIVTLNTIAKVMRR 177
+ A P + Y +++D L K ++ RA +EM K + T N + +
Sbjct: 188 KKAFCTP----DTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNIL---ISG 240
Query: 178 FSGAGQWEDAVRTFDELGTF-GLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIP 234
F AG + A + + T G + T ++D L K K+E A ++ + C P
Sbjct: 241 FCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTP 300
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYEL 294
A T+N ++G CK+ R++EA ++++ +GC P V++Y+++I ++ + Y+L
Sbjct: 301 TIA-TYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKL 359
Query: 295 LDEMQ-----------------------------------AQGCPPNVVTYTTVMSYLAK 319
EM + GC P+VVT +T++ L+K
Sbjct: 360 FKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSK 419
Query: 320 SGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTS 379
+G A+RI + M+ G P+ ++ LI+ L +A ++ A+ + +M + PDT
Sbjct: 420 AGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEML-AQMKKAFCTPDTI 478
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLD 439
T+N +I G E A +EM + CKP+V T++ L+ K G TD + D
Sbjct: 479 TYNILIDGLCKSGDVEAARAFFDEMLE-AGCKPDVYTYNILISGFCKAGNTDAACG-VFD 536
Query: 440 DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
DM + S ++ TY +I GLC+ + A L F+ M
Sbjct: 537 DM-SSSRCSANVVTYGALISGLCKRRQLTKASLYFQHM 573
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 171/359 (47%), Gaps = 6/359 (1%)
Query: 149 QMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN 207
++++ AL+E++ + G T+ T ++ G+ E+A+ ++ G + T
Sbjct: 1 KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60
Query: 208 LLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
L+D L KE + A +F E+ + + + I + ++ +A + M H
Sbjct: 61 SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
GC P V++ ST+I + + M+A+G PN V Y+ ++ L K+ + A
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 180
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
+ + +MK PD+ +N LI L ++ V EA + EM E G PD T+N +I+
Sbjct: 181 LEMLAQMKKAFCTPDTITYNVLIDGLCKSGDV-EAARAFFDEMLEAGCKPDVYTYNILIS 239
Query: 387 MFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHH 446
F G+ + A H L + + C ++ T+ ++ K K +E ++ L + + +
Sbjct: 240 GFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVA--LMEKITANG 297
Query: 447 LSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDA 504
+ I TY +++GLC+ + E A L ++++ + TP T ++D + K+K ++A
Sbjct: 298 CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEA 356
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 121/254 (47%), Gaps = 4/254 (1%)
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
+++EA ++++ +GC P + +Y+ ++ C+ + +LL ++ GC P+VVTYT
Sbjct: 1 KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
+++ L K EA ++ ++M + G D+ + LI L + ++ +A VY+ M
Sbjct: 61 SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKT-MTS 119
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
+G PD T +TMI S G A + + M PN + L+ K K D
Sbjct: 120 HGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEA-RGLAPNEVVYSALIHGLCKARKMD 178
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRL 491
C ++L M K + D TY ++I GLC++ E A F EM+ P T +
Sbjct: 179 -CALEMLAQM-KKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNI 236
Query: 492 ILDEVKQKHMYDAA 505
++ + DAA
Sbjct: 237 LISGFCKAGNTDAA 250
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 112/239 (46%), Gaps = 3/239 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++D LGK ++ + L +EM+ +G + ++R G+ A + +
Sbjct: 340 YTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMT 399
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVD 254
+ G + T++ ++D L K G++ A +F +++ + PN ++ IHG CK ++D
Sbjct: 400 SHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMD 459
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
A + +MK C P I+Y+ +I C+ + DEM GC P+V TY ++
Sbjct: 460 CALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILI 519
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
S K+G+ + A + + M + + LI L + ++ +A +Q M E G
Sbjct: 520 SGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCKRRQLTKASLYFQ-HMKERG 577
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 88/221 (39%), Gaps = 39/221 (17%)
Query: 294 LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLG 353
L++++ A GC P + TY +++ L K G EEAI + K+ G PD + LI LG
Sbjct: 8 LMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLG 67
Query: 354 RASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPN 413
+ R EA +++ EM G+A DT + +I G +A V + M C P
Sbjct: 68 KEKRSFEAYKLFK-EMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTS-HGCVP- 124
Query: 414 VQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLL 473
D+ T + +I GL +A + A +
Sbjct: 125 ------------------------------------DVVTLSTMIDGLSKAGRIGAAVRI 148
Query: 474 FKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
FK M + P ++ + + D A ++ A MKK
Sbjct: 149 FKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKK 189
>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 102/408 (25%), Positives = 195/408 (47%), Gaps = 17/408 (4%)
Query: 97 QPSHYLVNKLIHRF-----KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMD 151
QP + N LI+ F DD L R P + Y +M+ L ++D
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSP----DTVTYNIMIGSLCSRGKLD 210
Query: 152 -QMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLL 210
++ L + +S T+ T ++ G ++A++ DE+ + GL+ + T N ++
Sbjct: 211 LALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTII 270
Query: 211 DTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGC 268
+CKEG V+ A + LELK C P+ ++NI + + +E + + +M C
Sbjct: 271 RGMCKEGMVDRAFEMVRNLELKGC-EPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC 329
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
P V++YS +I + CR + LL M+ +G P+ +Y +++ + G + AI
Sbjct: 330 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE 389
Query: 329 ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF 388
E M G PD +N ++ TL + + +A+ ++ ++ E G +P++S++NTM +
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFG-KLGEVGCSPNSSSYNTMFSAL 448
Query: 389 SHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
G +A H++ EM P+ T++ ++ + G DE L+D + H S
Sbjct: 449 WSSGDKIRALHMILEMMS-NGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPS 507
Query: 449 LDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV 496
+ TY +V+ G C+A++ E A + + M+G+ P T ++++ +
Sbjct: 508 --VVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/394 (24%), Positives = 182/394 (46%), Gaps = 44/394 (11%)
Query: 156 LLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK 215
+LE+ + + N + + F + +DA R D + + +T T N+++ +LC
Sbjct: 149 ILEKFGQPDVFAYNAL---INGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCS 205
Query: 216 EGKVELARSVFLELKS--CIP----------------------------------PNAHT 239
GK++LA V +L S C P P+ T
Sbjct: 206 RGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFT 265
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+N I G CK VD A ++ ++ GC P VISY+ ++++ Q + + +L+ +M
Sbjct: 266 YNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMF 325
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
++ C PNVVTY+ +++ L + G EEA+ + + MK G PD+ ++ LI R R+
Sbjct: 326 SEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLD 385
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
A+ + M +G PD +NT++ +G ++A + ++ ++ C PN +++
Sbjct: 386 VAIEFLET-MISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEV-GCSPNSSSYNT 443
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
+ + + +G L +L+ M N + D TY +I LCR + A+ L +M
Sbjct: 444 MFSALWSSGDKIRALHMILEMMSN--GIDPDEITYNSMISCLCREGMVDEAFELLVDMRS 501
Query: 480 HDITPRYQTCRLILDEVKQKH-MYDAAEKIEAVM 512
+ P T ++L + H + DA +E+++
Sbjct: 502 CEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMV 535
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 113/231 (48%), Gaps = 8/231 (3%)
Query: 137 YEMMVDIL---GKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDE 193
Y +++ L GK+ + + L++E KG + ++ F G+ + A+ +
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKE--KGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 393
Query: 194 LGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFN-IFIHGWCKIN 251
+ + G + N +L TLCK GK + A +F +L PN+ ++N +F W +
Sbjct: 394 MISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGD 453
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
++ A I EM +G P I+Y+++I CR+ + +ELL +M++ P+VVTY
Sbjct: 454 KI-RALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYN 512
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
V+ K+ E+AI + E M G +P+ + LI +G A EA+
Sbjct: 513 IVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAM 563
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 91/199 (45%), Gaps = 2/199 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y+ ++ + ++D LE M S G + + V+ G+ + A+ F +LG
Sbjct: 371 YDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLG 430
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVD 254
G N+ + N + L G A + LE+ S I P+ T+N I C+ VD
Sbjct: 431 EVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVD 490
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA + +M+ HP V++Y+ ++ +C+ + +L+ M GC PN TYT ++
Sbjct: 491 EAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLI 550
Query: 315 SYLAKSGDFEEAIRITEKM 333
+ +G EA+ + +
Sbjct: 551 EGIGFAGYRAEAMELANDL 569
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 174/344 (50%), Gaps = 7/344 (2%)
Query: 147 VRQMDQMRALLEEMSKGHIVTLNTIAKVM-RRFSGAGQWEDAVRTFDELGTFGLEKNTET 205
V +++ + AL+ M G+ T N + ++ R + A + + F L + G +
Sbjct: 27 VSRVEVVEALVSSMC-GNCGTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINA 85
Query: 206 MNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
N LL L K VELA V E+ +S I N +T NI ++ CK + D+ + + EM+
Sbjct: 86 CNSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEME 145
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
G+G + +++Y+T+I +YCR+ + +E+++ M +G P++ TY +++ L K G +
Sbjct: 146 GNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYA 205
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTM 384
A I +M +G PD+ +N L+ R EA ++ EM GV PD +F+++
Sbjct: 206 RAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFG-EMLRQGVVPDLVSFSSL 264
Query: 385 ITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK 444
I +FS + H ++A +M K NV + L+ + G E L ++ D+M+ +
Sbjct: 265 IAVFSRNRHLDQALVYFRDMKKFGLVPDNV-IYTVLMHGYCRNGNMLEAL-KIRDEMLEQ 322
Query: 445 HHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ LD+ Y +++GLC+ A LF EM+ P + T
Sbjct: 323 GCV-LDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYT 365
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 110/464 (23%), Positives = 192/464 (41%), Gaps = 50/464 (10%)
Query: 82 EVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMV 141
E F+ L+ +I + L+ L+ K DW G E + +MV
Sbjct: 69 EAFRILRSKGYLVSINACNSLLGGLV---KIDWVELAWEVHREVVRSGIELNVYTLNIMV 125
Query: 142 DILGKVRQMDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTF 197
+ L K + D +++ L EM I VT NT+ R G E+A + +
Sbjct: 126 NALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCR---EGLLEEAFEIMNSMADK 182
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEA 256
GL+ + T N +++ LCK+G+ A+ + +E L + P+ T+N + C+ + EA
Sbjct: 183 GLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEA 242
Query: 257 QWTIQEMKGHGCHPCVISYSTIIQ-----------------------------------S 281
+ EM G P ++S+S++I
Sbjct: 243 KEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHG 302
Query: 282 YCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPD 341
YCR N + ++ DEM QGC +V+ Y T+++ L K +A ++ ++M G+ PD
Sbjct: 303 YCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPD 362
Query: 342 SRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVL 401
F LI+ + + +A+ ++ M + + PD +NT+I F G EKA +
Sbjct: 363 FYTFTTLIHGHCQDGNMTKALSLFGT-MTQRNIKPDIVAYNTLIDGFCKVGEMEKASELW 421
Query: 402 EEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGL 461
+ M PN T+ L+ + G E +L D M+ K + + T VI G
Sbjct: 422 DGMIS-RKIFPNHITYGILINAYCSVGHVSEAF-RLWDVMIEK-GIKPTLVTCNTVIKGY 478
Query: 462 CRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
CR+ A MI + P + + +++ ++ D A
Sbjct: 479 CRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKA 522
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 162/353 (45%), Gaps = 12/353 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKV-MRRFSGAGQWEDAVRTFDELG 195
+ ++ + + R +DQ +M K +V N I V M + G +A++ DE+
Sbjct: 261 FSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEML 320
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
G + N +L+ LCKE + A +F E+ + P+ +TF IHG C+ +
Sbjct: 321 EQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMT 380
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
+A M P +++Y+T+I +C+ K EL D M ++ PN +TY ++
Sbjct: 381 KALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILI 440
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL---GRASRVQEAVYVYQVEMPE 371
+ G EA R+ + M G KP N +I G +S+ E + M
Sbjct: 441 NAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADE----FLGRMIA 496
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
GVAPD ++NT+I F + +KAF + +M K E P++ T++ ++ + G+
Sbjct: 497 KGVAPDHISYNTLINGFVREDNMDKAFLWINKMEK-EGLLPDIITYNVVMNGFCRQGRMQ 555
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
E +L M+ K ++ D +TYT +I+G + A+ EM+ P
Sbjct: 556 EA-ELVLRKMIEKG-INPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAP 606
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 111/253 (43%), Gaps = 9/253 (3%)
Query: 98 PSHYLVNKLIHRFKDDWK--SALGIFRWAGSCPGYEHSSEI--YEMMVDILGKVRQMDQM 153
P Y LIH D AL +F G+ +I Y ++D KV +M++
Sbjct: 361 PDFYTFTTLIHGHCQDGNMTKALSLF---GTMTQRNIKPDIVAYNTLIDGFCKVGEMEKA 417
Query: 154 RALLEEMSKGHIVTLN-TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDT 212
L + M I + T ++ + G +A R +D + G++ T N ++
Sbjct: 418 SELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKG 477
Query: 213 LCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPC 271
C+ G A + + P+ ++N I+G+ + + +D+A I +M+ G P
Sbjct: 478 YCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPD 537
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
+I+Y+ ++ +CRQ + +L +M +G P+ TYT +++ + EA R +
Sbjct: 538 IITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHD 597
Query: 332 KMKIVGSKPDSRF 344
+M G PD F
Sbjct: 598 EMLQRGFAPDDVF 610
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/265 (18%), Positives = 107/265 (40%), Gaps = 40/265 (15%)
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
++RV+ + + M G+ C + + +I++Y + + E ++++G ++
Sbjct: 27 VSRVEVVEALVSSMCGN-CGTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINA 85
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM 369
+++ L K E A + ++ G + + N ++ L + + + V + EM
Sbjct: 86 CNSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDD-VKSFLSEM 144
Query: 370 PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
NG+ D T+NT+I + G E+AF ++ M + KP+
Sbjct: 145 EGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMAD-KGLKPS---------------- 187
Query: 430 TDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTC 489
+ TY +I+GLC+ + A + EM+ ++P T
Sbjct: 188 ---------------------LFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTY 226
Query: 490 RLILDEVKQKHMYDAAEKIEAVMKK 514
+L E ++ + A++I M +
Sbjct: 227 NTLLVESCRRDNFSEAKEIFGEMLR 251
>gi|125537564|gb|EAY84052.1| hypothetical protein OsI_39281 [Oryza sativa Indica Group]
Length = 762
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 164/324 (50%), Gaps = 9/324 (2%)
Query: 103 VNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK 162
V KL+H D ALG F+W PG++H Y M+ ILG+ RQ MR LL+EM+
Sbjct: 339 VLKLLH----DHTIALGFFQWLKRQPGFKHDGHSYTTMIGILGQARQFGTMRKLLDEMNS 394
Query: 163 GHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVEL 221
H T+ T +++ + A +AV+ F+E+ G E + T L+D K G +E+
Sbjct: 395 VHCKPTVVTYNRIIHAYGRANYLREAVKVFEEMQKAGYEPDRVTYCTLIDIHAKGGYLEV 454
Query: 222 ARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQ 280
A ++ ++ + P+ T++ ++ K + A EM +GC P +++Y+ +I
Sbjct: 455 AMDLYTRMQEVGLSPDTFTYSAMVNCLGKGGHLAAAYKLFCEMVENGCTPNLVTYNIMIA 514
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
+ N+ V +L +MQ G P+ +TY+ VM L G +EA + +M+ + P
Sbjct: 515 LQAKARNYENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRHDWA-P 573
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
D + L+ G+A V +A+ Y M ++G+ P+ T N++++ F + A+ V
Sbjct: 574 DEPVYGLLVDLWGKAGNVDKALGWYHA-MLQDGLQPNVPTCNSLLSAFLKINRFQDAYSV 632
Query: 401 LEEMNKLEHCKPNVQTFHPLLKSC 424
L+ M + P++QT+ LL C
Sbjct: 633 LQNM-LAQGLVPSLQTYTLLLSCC 655
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 122/258 (47%), Gaps = 5/258 (1%)
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
+ H++ I + + + + EM C P V++Y+ II +Y R + ++
Sbjct: 365 DGHSYTTMIGILGQARQFGTMRKLLDEMNSVHCKPTVVTYNRIIHAYGRANYLREAVKVF 424
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
+EMQ G P+ VTY T++ AK G E A+ + +M+ VG PD+ ++ ++ LG+
Sbjct: 425 EEMQKAGYEPDRVTYCTLIDIHAKGGYLEVAMDLYTRMQEVGLSPDTFTYSAMVNCLGKG 484
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQ 415
+ A Y EM ENG P+ T+N MI + + ++E + ++M ++ +P+
Sbjct: 485 GHL-AAAYKLFCEMVENGCTPNLVTYNIMIALQAKARNYENVVKLYKDM-QVAGFRPDKI 542
Query: 416 TFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFK 475
T+ +++ G DE + ++ +H + D Y L++ +A + A +
Sbjct: 543 TYSIVMEVLGHCGHLDEAEAVFIE---MRHDWAPDEPVYGLLVDLWGKAGNVDKALGWYH 599
Query: 476 EMIGHDITPRYQTCRLIL 493
M+ + P TC +L
Sbjct: 600 AMLQDGLQPNVPTCNSLL 617
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 100/240 (41%), Gaps = 39/240 (16%)
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
SY+T+I + F + +LLDEM + C P VVTY ++ ++ EA+++ E+M
Sbjct: 368 SYTTMIGILGQARQFGTMRKLLDEMNSVHCKPTVVTYNRIIHAYGRANYLREAVKVFEEM 427
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
+ G +PD + LI + ++ A+ +Y M E G++PDT T++ M+ GH
Sbjct: 428 QKAGYEPDRVTYCTLIDIHAKGGYLEVAMDLY-TRMQEVGLSPDTFTYSAMVNCLGKGGH 486
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
A+ + EM + C PN + T
Sbjct: 487 LAAAYKLFCEMVE-NGCTPN-------------------------------------LVT 508
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
Y ++I +A E L+K+M P T ++++ + D AE + M+
Sbjct: 509 YNIMIALQAKARNYENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMR 568
>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Brachypodium distachyon]
Length = 966
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 118/481 (24%), Positives = 203/481 (42%), Gaps = 67/481 (13%)
Query: 93 CNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSC---PGY----------------- 130
CN P+ L N L+H + D+ A +F +C PGY
Sbjct: 337 CN---PNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELP 393
Query: 131 -----EHSSEIYEMMVD---ILGKVRQMDQMRALL-------------EEMSKGHIVTLN 169
+ ++YE M+ +L KV + R L E M KG + +
Sbjct: 394 NAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTS 453
Query: 170 TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL 229
T KV+ A + E + F E+ G+ + T +L+D+ CK G +E ARS F E+
Sbjct: 454 TYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEM 513
Query: 230 KSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
+S PN T+ +H + K ++ +A M C+P ++YS +I C+
Sbjct: 514 RSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEI 573
Query: 289 SKVYELLDEMQAQG----------------CPPNVVTYTTVMSYLAKSGDFEEAIRITEK 332
K E+ +++ PNVVTY ++ L K+ +A + +
Sbjct: 574 QKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDA 633
Query: 333 MKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
M G +P+ ++ LI + ++ A V+ + M + G P T+ ++I G
Sbjct: 634 MLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVF-LRMTKCGYLPSVHTYTSLIDRMFKDG 692
Query: 393 HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
+ A VL EM + C PNV T+ ++ K G+ ++ L+ L ++ + S ++
Sbjct: 693 RLDLAMKVLSEMLN-DSCNPNVVTYTAMIDGLSKVGEIEKALNLL--SLMEEKGCSPNVV 749
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
TYT +I GL + K + + LFK+M P Y T R++++ + D A + M
Sbjct: 750 TYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEM 809
Query: 513 K 513
K
Sbjct: 810 K 810
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 147/319 (46%), Gaps = 10/319 (3%)
Query: 170 TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL 229
T ++ A + DA D + G E N + L+D CK GK++ A+ VFL +
Sbjct: 610 TYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRM 669
Query: 230 KSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
C P+ HT+ I K R+D A + EM C+P V++Y+ +I +
Sbjct: 670 TKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEI 729
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
K LL M+ +GC PNVVTYT ++ L K+G + ++++ ++M G P+ + L
Sbjct: 730 EKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVL 789
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
I A + EA ++ EM ++ + FS + +LEEM E
Sbjct: 790 INHCCAAGLLDEA-HLLLDEMKHTHWPKHLQGYHCAVQGFSKK--FIASLGLLEEMESHE 846
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT---YTLVIHGLCRAN 465
P + L+ S K G+ + L +L ++V SL++T+ Y +I LC A+
Sbjct: 847 TV-PIAPVYGMLIDSFSKAGRLETAL-ELHKELVEVSS-SLNMTSTGMYASLIQALCLAS 903
Query: 466 KCEWAYLLFKEMIGHDITP 484
+ E A+ L+ EM I P
Sbjct: 904 QVEEAFTLYTEMTRKGIVP 922
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 105/468 (22%), Positives = 180/468 (38%), Gaps = 78/468 (16%)
Query: 120 IFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVM-RRF 178
F WA GY H+ Y+ + +ILG LL E+ + L + V+ RR
Sbjct: 120 FFLWAERQVGYSHTGACYDALAEILGFEDPARTAERLLREIGEDDREVLRRLLNVLVRRC 179
Query: 179 SGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNA 237
G W++A+ L FG + T N L+ L G+VE+ V E+ S +
Sbjct: 180 CRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDR 239
Query: 238 HTFNIFIHGWCKINR--------------------------------VDEAQWTIQEMKG 265
T F CK+ R +EA + M+
Sbjct: 240 STIGYFAQALCKVGRWADALNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRC 299
Query: 266 HGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEE 325
+ C P V++Y T++ + ++ F +++ M +GC PN + +++ +GD+
Sbjct: 300 NSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAY 359
Query: 326 AIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA--------VY-------------- 363
A ++ +M GS P +N I ++ + A VY
Sbjct: 360 AYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVN 419
Query: 364 ----------------VYQV--EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMN 405
+Q+ EM G PDTST+ +IT EK+F + +EM
Sbjct: 420 TANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEM- 478
Query: 406 KLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRAN 465
K P+V T+ L+ S K G ++ S D + S ++ TYT ++H ++
Sbjct: 479 KRAGVNPDVYTYTILIDSFCKAGLIEQARSWF--DEMRSVGCSPNVVTYTALLHAYLKSK 536
Query: 466 KCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEAVM 512
+ A+ +F M+ P T ++D + K + A E E ++
Sbjct: 537 QLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLI 584
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 147/311 (47%), Gaps = 9/311 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
G E + +Y+ ++D K+ ++D + + M+K G++ +++T ++ R G+ + A
Sbjct: 638 GCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLA 697
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSV--FLELKSCIPPNAHTFNIFIH 245
++ E+ N T ++D L K G++E A ++ +E K C PN T+ I
Sbjct: 698 MKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGC-SPNVVTYTALID 756
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G K + D + ++M GC P ++Y +I C + + LLDEM+ P
Sbjct: 757 GLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPK 816
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
++ Y + +K F ++ + E+M+ + P + + LI + +A R++ A+ ++
Sbjct: 817 HLQGYHCAVQGFSKK--FIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELH 874
Query: 366 Q--VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
+ VE+ + T + ++I E+AF + EM + + P++ F L+K
Sbjct: 875 KELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTR-KGIVPDLIVFVSLVKG 933
Query: 424 CFKTGKTDECL 434
+ K DE L
Sbjct: 934 LIEVNKWDEAL 944
>gi|147846788|emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]
Length = 733
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 112/430 (26%), Positives = 194/430 (45%), Gaps = 21/430 (4%)
Query: 83 VFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVD 142
+ +SLK VC +Q + D + AL F WA Y H +Y M++
Sbjct: 95 LLRSLKPRQVCAVLQ------------LQTDERVALRFFYWADRQWRYRHDPIVYYAMLE 142
Query: 143 ILGKVRQMDQMRALLEEMSKGHIVTL-NTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEK 201
IL K + + +L M+K I VM +S AG+ +A+R + G+E
Sbjct: 143 ILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRXLTMMQKAGIEP 202
Query: 202 NTETMNLLLDTLCKEGKVELARSVFLELKSC--IPPNAHTFNIFIHGWCKINRVDEAQWT 259
+ N + L +++ A FLE I PN T+N I G+C ++R+++A
Sbjct: 203 DLSICNTAIHVLVMGNRLDKAVR-FLERMQIVEIXPNVITYNCLIKGYCDLHRLEDAXEL 261
Query: 260 IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM-QAQGCPPNVVTYTTVMSYLA 318
I EM GC P ISY T++ C++ ++ L+++M + P+ VTY T + L+
Sbjct: 262 IAEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQVTYNTFVHMLS 321
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDT 378
K G +EA+ + + + D ++ ++++ R R+ +A + EM G PD
Sbjct: 322 KHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVN-EMFSKGCIPDV 380
Query: 379 STFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLL 438
T+ ++I ++A +L +M K CKPN ++ LL K G + E +
Sbjct: 381 VTYTSVINGLCQERKVDQAKKMLRQMYK-HGCKPNTVSYTALLNGLCKNGNSLEAREMM- 438
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQ 498
+M + + TY++++HG R K A L +EMI P L++ + Q
Sbjct: 439 -NMSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQ 497
Query: 499 KHMYDAAEKI 508
+ D A++
Sbjct: 498 EEKVDEAKRF 507
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 111/450 (24%), Positives = 207/450 (46%), Gaps = 34/450 (7%)
Query: 65 PDIDVIISKVHV---GSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKD-----DWKS 116
PD+ + + +HV G+ D+ + L++ + I P+ N LI + D D
Sbjct: 202 PDLSICNTAIHVLVMGNRLDKAVRFLERMQIVE-IXPNVITYNCLIKGYCDLHRLEDAXE 260
Query: 117 ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGH-----IVTLNTI 171
+ + G P Y ++ L K +++ ++R L+E+M K VT NT
Sbjct: 261 LIAEMPFKGCSP----DKISYYTVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQVTYNTF 316
Query: 172 AKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-- 229
++ S G ++A+ E + + ++ + C+EG+++ A+ + E+
Sbjct: 317 VHML---SKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFS 373
Query: 230 KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFS 289
K CIP + T+ I+G C+ +VD+A+ +++M HGC P +SY+ ++ C+ N
Sbjct: 374 KGCIP-DVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSL 432
Query: 290 KVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
+ E+++ + PN +TY+ +M + G EA + +M G P N LI
Sbjct: 433 EAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLI 492
Query: 350 YTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH 409
+L + +V EA + + NG A + F T+I F E A +L++M L +
Sbjct: 493 QSLCQEEKVDEAKR-FMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMY-LSN 550
Query: 410 CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEW 469
P+V T+ ++ + K G+ +E ++L M+ + +T Y VIH CR + E
Sbjct: 551 KHPDVVTYTTIIDALGKKGRIEEA-TKLAMKMLRVGWIPTPVT-YRTVIHQYCRMGRVED 608
Query: 470 AYLLFKEMIGHDITPRYQTCRLILDEVKQK 499
L ++M+ Q CR ++V +K
Sbjct: 609 LLKLLEKMLSR------QECRTAYNQVIEK 632
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 184/393 (46%), Gaps = 13/393 (3%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQW 184
G E I + +L ++D+ LE M +++T N + K + +
Sbjct: 199 GIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIXPNVITYNCLIK---GYCDLHRL 255
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNI 242
EDA E+ G + + ++ LCKE +++ R + ++ S + P+ T+N
Sbjct: 256 EDAXELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQVTYNT 315
Query: 243 FIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
F+H K DEA ++E + + YS I+ S+CR+ K E+++EM ++G
Sbjct: 316 FVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKG 375
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
C P+VVTYT+V++ L + ++A ++ +M G KP++ + L+ L + EA
Sbjct: 376 CIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAR 435
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLK 422
+ + E P+ T++ ++ F G +A ++ EM K + P + L++
Sbjct: 436 EMMNMS-EEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIK-KGFFPTPVEINLLIQ 493
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
S + K DE + ++ +N + ++++ +T VIHG C+ + E A L +M +
Sbjct: 494 SLCQEEKVDEA-KRFMEQCLN-NGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNK 551
Query: 483 TPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
P T I+D + +K + A K+ M ++
Sbjct: 552 HPDVVTYTTIIDALGKKGRIEEATKLAMKMLRV 584
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 148/329 (44%), Gaps = 41/329 (12%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +V + +MD+ + ++ EM SKG I + T V+ + + A + ++
Sbjct: 348 YSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMY 407
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGW------- 247
G + NT + LL+ LCK G AR + + + PNA T+++ +HG+
Sbjct: 408 KHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSS 467
Query: 248 ----------------------------CKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
C+ +VDEA+ +++ +GC V++++T+I
Sbjct: 468 EACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVI 527
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
+C++ + LLD+M P+VVTYTT++ L K G EEA ++ KM VG
Sbjct: 528 HGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGWI 587
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
P + +I+ R RV++ + + + + + +N +I G+ E+A+
Sbjct: 588 PTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQEC---RTAYNQVIEKLCSFGNLEQAYK 644
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
+L ++ + K + T H L++S G
Sbjct: 645 LLGKVLRTAS-KIDANTCHMLIESYLSKG 672
>gi|356557957|ref|XP_003547276.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At5g43820-like [Glycine max]
Length = 505
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 175/378 (46%), Gaps = 11/378 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++V LG+ + D M L +M + I L ++ V+ F AG A++ F L
Sbjct: 113 YHVIVKALGRRKFFDFMMDALCDMRRNAIDGDLFMLSVVVDSFVRAGHVSRAIQVFGNLD 172
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDE 255
G+ ++TE +N+LL LC+ V A SV +K + + T+N GW + RV E
Sbjct: 173 DLGVRRDTEALNVLLLCLCRRSHVGAANSVLNSMKGKVDFDVGTYNAVAGGWSRFGRVSE 232
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
+ ++EM+ G P ++ +I+ R+ + E+L M+ C P+ TY V+
Sbjct: 233 VERVMREMEADGLRPDCRTFGFLIEGLGREGRMDEAVEILCGMKEMNCQPDTETYNAVIF 292
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
GDFEE I+ +M +P+ + +I RA +V +A+ ++ EM GV
Sbjct: 293 NFVSVGDFEECIKYYNRMLSDNCEPNLDTYARMINRFLRARKVADALLMFD-EMLRRGVV 351
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS 435
P T T T I +G A + ++ KL C +++ + LL GK LS
Sbjct: 352 PSTGTITTFIKRLCSYGPPYAALMIYKKARKL-GCVISMEAYKILLMRLSMVGKCGTLLS 410
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE 495
+ ++M + S D+ Y +I GLC + E A L+ +E + P RL+ +
Sbjct: 411 -IWEEM-QECGYSSDLEVYECIISGLCNVGQLENAVLVMEEALRKGFCP----SRLVYSK 464
Query: 496 VKQKHMYDAAEKIEAVMK 513
+ + + A++K E K
Sbjct: 465 LSNRLL--ASDKSERAYK 480
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/239 (19%), Positives = 98/239 (41%), Gaps = 2/239 (0%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDA 187
G + +++ LG+ +MD+ +L M + + T V+ F G +E+
Sbjct: 244 GLRPDCRTFGFLIEGLGREGRMDEAVEILCGMKEMNCQPDTETYNAVIFNFVSVGDFEEC 303
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHG 246
++ ++ + + E N +T +++ + KV A +F E L+ + P+ T FI
Sbjct: 304 IKYYNRMLSDNCEPNLDTYARMINRFLRARKVADALLMFDEMLRRGVVPSTGTITTFIKR 363
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C A ++ + GC + +Y ++ + + +EMQ G +
Sbjct: 364 LCSYGPPYAALMIYKKARKLGCVISMEAYKILLMRLSMVGKCGTLLSIWEEMQECGYSSD 423
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
+ Y ++S L G E A+ + E+ G P ++ L L + + + A ++
Sbjct: 424 LEVYECIISGLCNVGQLENAVLVMEEALRKGFCPSRLVYSKLSNRLLASDKSERAYKLF 482
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 174/342 (50%), Gaps = 15/342 (4%)
Query: 168 LNTIAKVMRRFSGAGQWEDAVRTFDE-LGTFGLEKNTETMNLLLDTLCKEGKVELARSVF 226
L+ IAK M++F D V + E + G+ N T N+L++ C+ ++ LA ++
Sbjct: 17 LSAIAK-MKKF-------DLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 68
Query: 227 LEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQ 285
++ K P+ T + ++G+C R+ +A + +M G P I+++T+I
Sbjct: 69 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 128
Query: 286 YNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFF 345
S+ L+D M +GC PN+VTY V++ L K GD + A + KM+ + D F
Sbjct: 129 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIF 188
Query: 346 NCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMN 405
N +I +L + V +A+ +++ EM G+ P+ T++++I+ +G A +L +M
Sbjct: 189 NTIIDSLCKYRHVDDALNLFK-EMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 406 KLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRAN 465
+ + PN+ TF+ L+ + K GK E +L DDM+ K + DI TY +I+G C +
Sbjct: 248 E-KKINPNLVTFNALIDAFVKEGKFVEA-EKLHDDMI-KRSIDPDIFTYNSLINGFCMHD 304
Query: 466 KCEWAYLLFKEMIGHDITPRYQTCR-LILDEVKQKHMYDAAE 506
+ + A +F+ M+ D P T LI K K + D E
Sbjct: 305 RLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTE 346
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 189/389 (48%), Gaps = 8/389 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
G H+ Y ++++ + Q+ ALL +M K G+ ++ T++ ++ + + DA
Sbjct: 40 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 99
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIH 245
V D++ G +T T L+ L K A ++ + + C PN T+ + ++
Sbjct: 100 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGC-QPNLVTYGVVVN 158
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G CK +D A + +M+ V+ ++TII S C+ + L EM+ +G P
Sbjct: 159 GLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRP 218
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
NVVTY++++S L G + +A ++ M P+ FN LI + + EA ++
Sbjct: 219 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLH 278
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
+M + + PD T+N++I F H +KA + E M + C P++ T++ L+K
Sbjct: 279 D-DMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVS-KDCFPDLDTYNTLIKGFC 336
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
K+ + ++ ++L +M ++ L D TYT +I GL C+ A +FK+M+ + P
Sbjct: 337 KSKRVEDG-TELFREMSHRG-LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 394
Query: 486 YQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
T ++LD + + A ++ M+K
Sbjct: 395 IMTYSILLDGLCNNGKLEKALEVFDYMQK 423
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 169/366 (46%), Gaps = 15/366 (4%)
Query: 131 EHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVR 189
E I+ ++D L K R +D L +EM +KG + T + ++ G+W DA +
Sbjct: 182 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 241
Query: 190 TFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWC 248
++ + N T N L+D KEGK A + ++ K I P+ T+N I+G+C
Sbjct: 242 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFC 301
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
+R+D+A+ + M C P + +Y+T+I+ +C+ EL EM +G + V
Sbjct: 302 MHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 361
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
TYTT++ L GD + A ++ ++M G PD ++ L+ L ++++A+ V+
Sbjct: 362 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY- 420
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M ++ + D + TMI G + + + ++ L+ KPNV T++ ++
Sbjct: 421 MQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS-LKGVKPNVVTYNTMISGLCSKR 479
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
E + LL M L D TY +I R + L +EM ++
Sbjct: 480 LLQEAYA-LLKKMKEDGPLP-DSGTYNTLIRAHLRDGDKAASAELIREM---------RS 528
Query: 489 CRLILD 494
CR + D
Sbjct: 529 CRFVGD 534
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 135/288 (46%), Gaps = 8/288 (2%)
Query: 229 LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
+KS P+ FN + K+ + D ++M+ G + +Y+ +I +CR+
Sbjct: 2 VKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQI 61
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
S LL +M G P++VT +++++ +A+ + ++M +G +PD+ F L
Sbjct: 62 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 121
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
I+ L ++ EAV + M + G P+ T+ ++ G + AF++L NK+E
Sbjct: 122 IHGLFLHNKASEAVALVD-RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLL---NKME 177
Query: 409 HCK--PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANK 466
K +V F+ ++ S K D+ L+ L +M K + ++ TY+ +I LC +
Sbjct: 178 AAKIEADVVIFNTIIDSLCKYRHVDDALN-LFKEMETK-GIRPNVVTYSSLISCLCSYGR 235
Query: 467 CEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
A L +MI I P T ++D ++ + AEK+ M K
Sbjct: 236 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIK 283
>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
Length = 457
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 108/413 (26%), Positives = 188/413 (45%), Gaps = 19/413 (4%)
Query: 85 QSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEI-YEMMV 141
+ L + IQP+ N L+ + W A + R S G + Y ++
Sbjct: 30 ERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDLVTYSTLL 89
Query: 142 DILGKVRQMDQMRALLEE-MSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLE 200
K ++++ R LL+E +S+G KVM + + +A+ +E+ G
Sbjct: 90 SGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSARLGEALELLEEMIRAGCC 149
Query: 201 KNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWT 259
T N L+ C+E +E+A S+ + S + + T+N + G CK R+ EA+
Sbjct: 150 PTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQL 209
Query: 260 IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK 319
++ MK GC P V++YS+ + C+ +++L++M+ PNVVTY T++ L K
Sbjct: 210 LERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCK 269
Query: 320 SGDFEEAIRITEKMKIVGSKPDSRFFNCLIYT-----LGRASRVQEAVYVYQVEMPENGV 374
SG + A+ + E+M + D N + Y+ L + R QEA V + M G
Sbjct: 270 SGKIDTALEMMEQM----ASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEA-MARAGC 324
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL---LKSCFKTGKTD 431
PD T+++++ G E+A + EM +E CKPN T+ L L SC + + +
Sbjct: 325 RPDVVTYSSLVNGLCKAGKIEEAVEAVREM-AMEGCKPNAVTYCSLVHGLCSCGRLAEAE 383
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
+ ++ H ++TY +I GLC+A + + A F+ M P
Sbjct: 384 RMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDP 436
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 182/372 (48%), Gaps = 14/372 (3%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQW 184
G +S + +V+ K + LLE M+ + ++V+ N + + + + +W
Sbjct: 5 GCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLE---RW 61
Query: 185 EDAVRTFDELGTFGLEKNTE--TMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFN 241
+A ++ + G + T + LL CK GKVE +R + E+ S + P+A +
Sbjct: 62 HEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYT 121
Query: 242 IFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ 301
+ CK R+ EA ++EM GC P +I+++T+I CR+ N LL M A
Sbjct: 122 KVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAAS 181
Query: 302 GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
G +VVTY T+M L K+G +EA ++ E+MK G PD ++ +Y L ++ +V A
Sbjct: 182 GVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNA 241
Query: 362 VYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLL 421
V + +M ++ P+ T+NT++ G + A ++E+M + C NV + ++
Sbjct: 242 HQVLE-QMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300
Query: 422 KSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHD 481
K G+T E S + + + + D+ TY+ +++GLC+A K E A +EM
Sbjct: 301 DGLCKLGRTQEARSVM--EAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEG 358
Query: 482 ITPRYQT-CRLI 492
P T C L+
Sbjct: 359 CKPNAVTYCSLV 370
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 129/269 (47%), Gaps = 9/269 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++D L K ++ + LLE M + G + + + +G+ +A + +++
Sbjct: 190 YNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMR 249
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC--IPPNAHTFNIFIHGWCKINRV 253
+ N T N +LD LCK GK++ A + ++ S N ++ + G CK+ R
Sbjct: 250 DSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRT 309
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
EA+ ++ M GC P V++YS+++ C+ + E + EM +GC PN VTY ++
Sbjct: 310 QEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSL 369
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSK-----PDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
+ L G EA R+ E+M G P +N LI L +A R+ +A+ +Q
Sbjct: 370 VHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQ-R 428
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKA 397
M G PD +++T++ + G +A
Sbjct: 429 MRSQGCDPDGVSYSTIVEGLARSGRALQA 457
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 144/274 (52%), Gaps = 6/274 (2%)
Query: 234 PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
PPN+ TFN ++G+ K R + + ++ M G P V+SY+ +++ C+ + + E
Sbjct: 7 PPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEE 66
Query: 294 LLDEMQAQG--CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYT 351
L+ +M ++G P++VTY+T++S K+G EE+ + +++ G +PD+ + ++ +
Sbjct: 67 LVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMAS 126
Query: 352 LGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCK 411
L +++R+ EA+ + + M G P TFNT+I+ + E A +L+ M K
Sbjct: 127 LCKSARLGEALELLEE-MIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTM-AASGVK 184
Query: 412 PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAY 471
+V T++ L+ K G+ E QLL+ M + D+ Y+ ++GLC++ K A+
Sbjct: 185 ADVVTYNTLMDGLCKAGRLQE-AEQLLERM-KASGCAPDVVAYSSFVYGLCKSGKVLNAH 242
Query: 472 LLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
+ ++M D P T ILD + + D A
Sbjct: 243 QVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTA 276
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 92/222 (41%), Gaps = 37/222 (16%)
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
M GCPPN VT+ +++ +K G + R+ E M G +P+ +N L+ L + R
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60
Query: 358 VQEAVYVYQVEMPENGVA-PDTSTFNTMITMFSHHGHHEKAFHVLEE------------- 403
EA + + + G + PD T++T+++ + G E++ +L+E
Sbjct: 61 WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120
Query: 404 ---MNKL------------------EHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMV 442
M L C P + TF+ L+ C + K E LL M
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCRE-KNLEMADSLLQTMA 179
Query: 443 NKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
+ D+ TY ++ GLC+A + + A L + M P
Sbjct: 180 -ASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAP 220
>gi|115489794|ref|NP_001067384.1| Os12g0638900 [Oryza sativa Japonica Group]
gi|77556813|gb|ABA99609.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113649891|dbj|BAF30403.1| Os12g0638900 [Oryza sativa Japonica Group]
gi|125580213|gb|EAZ21359.1| hypothetical protein OsJ_37016 [Oryza sativa Japonica Group]
Length = 859
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 163/324 (50%), Gaps = 9/324 (2%)
Query: 103 VNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK 162
V KL+H D ALG F+W PG++H Y M+ ILG+ RQ MR LL+EM+
Sbjct: 339 VLKLLH----DHTIALGFFQWLKRQPGFKHDGHSYTTMIGILGQARQFGTMRKLLDEMNS 394
Query: 163 GHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVEL 221
H T+ T +++ + A +AV+ F+E+ G E + T L+D K G +E
Sbjct: 395 VHCKPTVVTYNRIIHAYGRANYLREAVKVFEEMQKAGYEPDRVTYCTLIDIHAKGGYLEF 454
Query: 222 ARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQ 280
A ++ ++ + P+ T++ ++ K + A EM +GC P +++Y+ +I
Sbjct: 455 AMDLYTRMQEVGLSPDTFTYSAMVNCLGKGGHLAAAYKLFCEMVENGCTPNLVTYNIMIA 514
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
+ N+ V +L +MQ G P+ +TY+ VM L G +EA + +M+ + P
Sbjct: 515 LQAKARNYENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRHDWA-P 573
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
D + L+ G+A V +A+ Y M ++G+ P+ T N++++ F + A+ V
Sbjct: 574 DEPVYGLLVDLWGKAGNVDKALGWYHA-MLQDGLQPNVPTCNSLLSAFLKINRFQDAYSV 632
Query: 401 LEEMNKLEHCKPNVQTFHPLLKSC 424
L+ M + P++QT+ LL C
Sbjct: 633 LQNM-LAQGLVPSLQTYTLLLSCC 655
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 123/258 (47%), Gaps = 5/258 (1%)
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
+ H++ I + + + + EM C P V++Y+ II +Y R + ++
Sbjct: 365 DGHSYTTMIGILGQARQFGTMRKLLDEMNSVHCKPTVVTYNRIIHAYGRANYLREAVKVF 424
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
+EMQ G P+ VTY T++ AK G E A+ + +M+ VG PD+ ++ ++ LG+
Sbjct: 425 EEMQKAGYEPDRVTYCTLIDIHAKGGYLEFAMDLYTRMQEVGLSPDTFTYSAMVNCLGKG 484
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQ 415
+ A ++ EM ENG P+ T+N MI + + ++E + ++M ++ +P+
Sbjct: 485 GHLAAAYKLF-CEMVENGCTPNLVTYNIMIALQAKARNYENVVKLYKDM-QVAGFRPDKI 542
Query: 416 TFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFK 475
T+ +++ G DE + ++ +H + D Y L++ +A + A +
Sbjct: 543 TYSIVMEVLGHCGHLDEAEAVFIE---MRHDWAPDEPVYGLLVDLWGKAGNVDKALGWYH 599
Query: 476 EMIGHDITPRYQTCRLIL 493
M+ + P TC +L
Sbjct: 600 AMLQDGLQPNVPTCNSLL 617
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 100/240 (41%), Gaps = 39/240 (16%)
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
SY+T+I + F + +LLDEM + C P VVTY ++ ++ EA+++ E+M
Sbjct: 368 SYTTMIGILGQARQFGTMRKLLDEMNSVHCKPTVVTYNRIIHAYGRANYLREAVKVFEEM 427
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
+ G +PD + LI + ++ A+ +Y M E G++PDT T++ M+ GH
Sbjct: 428 QKAGYEPDRVTYCTLIDIHAKGGYLEFAMDLY-TRMQEVGLSPDTFTYSAMVNCLGKGGH 486
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
A+ + EM + C PN + T
Sbjct: 487 LAAAYKLFCEMVE-NGCTPN-------------------------------------LVT 508
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
Y ++I +A E L+K+M P T ++++ + D AE + M+
Sbjct: 509 YNIMIALQAKARNYENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMR 568
>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
Length = 432
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 163/327 (49%), Gaps = 12/327 (3%)
Query: 166 VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSV 225
VT N + +R F A + A E+ G++ N T +++L LC+ G+V A
Sbjct: 26 VTYNVL---IRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEH 82
Query: 226 F---LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM-KGHGCHPCVISYSTIIQS 281
F LEL P+ ++ I+G CK+ RVD A ++M GC P +Y+ ++
Sbjct: 83 FDASLELAHA-QPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDG 141
Query: 282 YCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPD 341
C+Q ++ E + + P+VVTY T+M+ L + G +EA+ +M G P
Sbjct: 142 LCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPT 201
Query: 342 SRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVL 401
FN +I L RA R+ +A+ V+ EM + P+ T++ +I ++A +L
Sbjct: 202 LVSFNAIITGLCRARRLADALEVFN-EMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLL 260
Query: 402 EEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGL 461
+ M E C+P++ + PL+ G+ D L LL MV++ + D+ TYT+VI L
Sbjct: 261 DRMVS-EGCRPDLVAYTPLVLGFSAAGRLDSALG-LLRRMVSQGCIP-DVVTYTVVIDKL 317
Query: 462 CRANKCEWAYLLFKEMIGHDITPRYQT 488
C+ + + A+ +F+E++ + +P T
Sbjct: 318 CKVGRVDDAHEIFRELVANKCSPNVVT 344
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 142/294 (48%), Gaps = 8/294 (2%)
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEA 256
G N T N L+D LCK+ +++ AR+V E K P+ T+N + ++ RVDEA
Sbjct: 127 GCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEA 186
Query: 257 QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSY 316
T +M G P ++S++ II CR + E+ +EM + PN+VTY+ V+
Sbjct: 187 LATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDG 246
Query: 317 LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
L KS +EA ++ ++M G +PD + L+ A R+ A+ + + M G P
Sbjct: 247 LCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLR-RMVSQGCIP 305
Query: 377 DTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQ 436
D T+ +I G + A + E+ C PNV T+ L+ + + DE +
Sbjct: 306 DVVTYTVVIDKLCKVGRVDDAHEIFRELVA-NKCSPNVVTYSALIGGYCRASRVDEG-GK 363
Query: 437 LLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCR 490
++ +M + + + TY +I GL ++ E AY +F+EM P +T R
Sbjct: 364 VMREMACRPN----VVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYR 413
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 160/327 (48%), Gaps = 15/327 (4%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS 161
L+N L + D +A +FR + G ++ Y +VD L K ++D RA++ E
Sbjct: 102 LINGLCKLGRVD--AAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEAR 159
Query: 162 K----GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEG 217
K +VT NT+ + + G+ ++A+ TF ++ G + N ++ LC+
Sbjct: 160 KRDFAPDVVTYNTLMAALFQL---GRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRAR 216
Query: 218 KVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYS 276
++ A VF E+ PN T+++ I G CK +++DEAQ + M GC P +++Y+
Sbjct: 217 RLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYT 276
Query: 277 TIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIV 336
++ + LL M +QGC P+VVTYT V+ L K G ++A I ++
Sbjct: 277 PLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVAN 336
Query: 337 GSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEK 396
P+ ++ LI RASRV E V M E P+ T+NTMI S +E+
Sbjct: 337 KCSPNVVTYSALIGGYCRASRVDEGGKV----MREMACRPNVVTYNTMIWGLSMVDRNEE 392
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKS 423
A+ + EM++ P+ +T+ L ++
Sbjct: 393 AYGMFREMSECGFV-PDARTYRGLKRA 418
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 138/333 (41%), Gaps = 41/333 (12%)
Query: 213 LCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG----- 267
+ + G A +F E +P ++ T+N+ I G+C + +D A ++EM G
Sbjct: 1 MVRAGSHNQALQLFRENPCQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCND 60
Query: 268 -------------------------------CHPCVISYSTIIQSYCRQYNFSKVYELLD 296
P V+SY+T+I C+ ++L
Sbjct: 61 RTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFR 120
Query: 297 EM-QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
+M A GC PN TY ++ L K + A + + + PD +N L+ L +
Sbjct: 121 KMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQL 180
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQ 415
RV EA+ + +M E G P +FN +IT A V EM + PN+
Sbjct: 181 GRVDEALATF-TQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDF-HPNLV 238
Query: 416 TFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFK 475
T+ ++ K+ + DE QLLD MV++ D+ YT ++ G A + + A L +
Sbjct: 239 TYSVVIDGLCKSDQLDEA-QQLLDRMVSE-GCRPDLVAYTPLVLGFSAAGRLDSALGLLR 296
Query: 476 EMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
M+ P T +++D++ + D A +I
Sbjct: 297 RMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEI 329
>gi|255660900|gb|ACU25619.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
Length = 481
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 191/389 (49%), Gaps = 14/389 (3%)
Query: 100 HYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEE 159
H LV ++H K + AL FRW +EH+ E + +++ILG+ +++ R +L +
Sbjct: 12 HELVYNVLHSSKTS-EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLD 70
Query: 160 M-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
M KG + ++ + G +++V+ F ++ G+E+ ++ N L + + G+
Sbjct: 71 MPKKGLEWDEDMWVMMIDSYGKZGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGR 130
Query: 219 VELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
+A+ F + L I P HTFN+ I G+ +V+ A ++MK P V++Y+T
Sbjct: 131 YMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNT 190
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
I Y R + + EM+ + P VVTYTT++ + A+R+ E+MK G
Sbjct: 191 XINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDXALRLVEEMKGFG 250
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP-DTSTFNTMITMFSHHGHHEK 396
KP++ ++ L+ L A ++ EA + + EM + +AP D S F +I+ G+ +
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMSEARVILK-EMMDKYLAPTDNSIFMRLISSHCXSGNLDA 309
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK-------HHLSL 449
A VL+ M +L + L+++ K G+ D+ + +LLD ++ K L L
Sbjct: 310 AADVLKAMXRLS-VPTEAGHYGVLIENFCKXGQYDKAV-KLLDKLIEKDIILRPQSTLHL 367
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMI 478
+ + Y I LC + A L ++++
Sbjct: 368 EPSAYNPXIEYLCNNGQAXKAETLVRQLM 396
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 123/267 (46%), Gaps = 6/267 (2%)
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
+ ++++ A+ + +M G + +I SY +Z + ++ +M+ G +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKZGIVQESVKMFQKMEELGVERTIK 116
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
+Y + + + G + A R KM G +P FN +I+ + +V+ A ++ +
Sbjct: 117 SYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFE-D 175
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M ++PD T+NT I + E+A EM K + +P V T+ L+K
Sbjct: 176 MKSREISPDVVTYNTXINGYYRVKKMEEAEKYFVEM-KGRNIEPTVVTYTTLIKGYVSVD 234
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ D L +L+++M + + TY+ ++ GLC A K A ++ KEM+ + P +
Sbjct: 235 QVDXAL-RLVEEM-KGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNS 292
Query: 489 C--RLILDEVKQKHMYDAAEKIEAVMK 513
RLI ++ AA+ ++A+ +
Sbjct: 293 IFMRLISSHCXSGNLDAAADVLKAMXR 319
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 83/179 (46%), Gaps = 4/179 (2%)
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N T+ ++ L ++ A I M G + D + +I + G+ VQE+V ++
Sbjct: 44 NRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKZGIVQESVKMF 103
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
Q +M E GV ++N + + G + A +M E +P TF+ ++ F
Sbjct: 104 Q-KMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLS-EGIEPTRHTFNVMIWGFF 161
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
+GK E ++ +DM ++ +S D+ TY I+G R K E A F EM G +I P
Sbjct: 162 LSGKV-ETANRFFEDMKSRE-ISPDVVTYNTXINGYYRVKKMEEAEKYFVEMKGRNIEP 218
>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
Length = 784
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 175/364 (48%), Gaps = 16/364 (4%)
Query: 154 RALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTL 213
R +++ + IVT N + V + A W++ V + G+ + T N L+
Sbjct: 196 RRMVDSGVQPAIVTYNVVLHVYSKM--AVPWKEVVELVASMKEHGVAPDRYTYNTLISCC 253
Query: 214 CKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCV 272
+ + A VF E+K S P+ TFN + + K R DEA IQEM+ GC P V
Sbjct: 254 RRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSV 313
Query: 273 ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEK 332
++Y+++I SY + + L EM+ +G P+VVTYTT++S L ++G + AI ++
Sbjct: 314 VTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDE 373
Query: 333 MKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
M G KP+ +N LI G + E + V+ E G PD T+NT++ +F +G
Sbjct: 374 MVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFD-EFRSAGFVPDIVTWNTLLAVFGQNG 432
Query: 393 HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
+ V +EM K + P T+ L+ S + G D + Q+ M+ + + D++
Sbjct: 433 LDSEVSGVFKEMKKAGYI-PERDTYVSLISSYSRCGLFDLAM-QIYKRMM-EAGIYPDVS 489
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMIGHDITP-RYQTCRLILDEVKQKHMYDAAEKIEAV 511
TY V+ L R + E A LF EM D P Y L+ H Y A++++
Sbjct: 490 TYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLL-------HAYANAKRLDK- 541
Query: 512 MKKL 515
MK L
Sbjct: 542 MKAL 545
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 179/391 (45%), Gaps = 15/391 (3%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAV 188
G H + + ++ + ++ + ALL+ + FS AG++ DAV
Sbjct: 136 GVLHHPRVLATAIRVMARAGRLAEASALLDAAPGPDAGAYTALVSA---FSRAGRFRDAV 192
Query: 189 RTFDELGTFGLEKNTETMNLLLDTLCK-----EGKVELARSVFLELKSCIPPNAHTFNIF 243
F + G++ T N++L K + VEL S+ + + P+ +T+N
Sbjct: 193 AVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASM---KEHGVAPDRYTYNTL 249
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
I + EA EMK G P +++++++ Y + + E++ EM+ GC
Sbjct: 250 ISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGC 309
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
PP+VVTY +++S K G E+A+ + ++M++ G KPD + LI L RA ++ A+
Sbjct: 310 PPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIV 369
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
Y EM NG P+ T+N +I M G + V +E P++ T++ LL +
Sbjct: 370 EYD-EMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFV-PDIVTWNTLL-A 426
Query: 424 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
F D +S + +M ++ + TY +I R + A ++K M+ I
Sbjct: 427 VFGQNGLDSEVSGVFKEMKKAGYIP-ERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIY 485
Query: 484 PRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
P T +L + + ++ AEK+ A M++
Sbjct: 486 PDVSTYNAVLSALARGGRWEQAEKLFAEMEE 516
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 97/436 (22%), Positives = 193/436 (44%), Gaps = 46/436 (10%)
Query: 82 EVFQSLKQDHVCNAIQPSHYLVNKLIH--RFKDDWKSALGIFRWAGSCPGYEHSSEIYEM 139
E+ S+K+ + + P Y N LI R + +K A +F + G+E +
Sbjct: 229 ELVASMKE----HGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKAS-GFEPDKVTFNS 283
Query: 140 MVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGL 199
++D+ GK R+ D+ +++EM + G
Sbjct: 284 LLDVYGKARRHDEAIEVIQEMER----------------------------------VGC 309
Query: 200 EKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQW 258
+ T N L+ + K+G +E A ++ E++ + P+ T+ I G + ++D A
Sbjct: 310 PPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIV 369
Query: 259 TIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLA 318
EM +GC P + +Y+ +I+ + + F ++ + DE ++ G P++VT+ T+++
Sbjct: 370 EYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFG 429
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDT 378
++G E + ++MK G P+ + LI + R A+ +Y+ M E G+ PD
Sbjct: 430 QNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYK-RMMEAGIYPDV 488
Query: 379 STFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLL 438
ST+N +++ + G E+A + EM + + CKP+ ++ LL + + D+ + L
Sbjct: 489 STYNAVLSALARGGRWEQAEKLFAEMEERD-CKPDEYSYSSLLHAYANAKRLDK-MKALS 546
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQ 498
DD+ ++ + TLV+ + N A F E+ + ++ +
Sbjct: 547 DDIYSERIEPHNWLVKTLVLVN-SKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGK 605
Query: 499 KHMYDAAEKIEAVMKK 514
M EKI ++MK+
Sbjct: 606 NRMVRKVEKILSLMKE 621
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 137/272 (50%), Gaps = 10/272 (3%)
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINR 252
EL G+ + + + + + G++ A ++ L + P+A + + + + R
Sbjct: 131 ELHGEGVLHHPRVLATAIRVMARAGRLAEASAL---LDAAPGPDAGAYTALVSAFSRAGR 187
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCR-QYNFSKVYELLDEMQAQGCPPNVVTYT 311
+A + M G P +++Y+ ++ Y + + +V EL+ M+ G P+ TY
Sbjct: 188 FRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYN 247
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
T++S + ++EA ++ ++MK G +PD FN L+ G+A R EA+ V Q EM
Sbjct: 248 TLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQ-EMER 306
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
G P T+N++I+ + G E+A + +EM +++ KP+V T+ L+ + GK D
Sbjct: 307 VGCPPSVVTYNSLISSYVKDGLLEQAVALKQEM-EVKGMKPDVVTYTTLISGLDRAGKID 365
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVI--HGL 461
+ + D+MV ++ ++ TY +I HG+
Sbjct: 366 AAIVE-YDEMV-RNGCKPNLCTYNALIKMHGV 395
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/383 (21%), Positives = 169/383 (44%), Gaps = 50/383 (13%)
Query: 90 DHVCNAIQPSHYLVNKLI--HRFKDDWKSALGIF---RWAGSCPGYEHSSEIYEMMVDIL 144
+ V N +P+ N LI H + + + +F R AG P + ++ +
Sbjct: 373 EMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIV----TWNTLLAVF 428
Query: 145 GKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNT 203
G+ ++ + +EM K G+I +T ++ +S G ++ A++ + + G+ +
Sbjct: 429 GQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDV 488
Query: 204 ETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWC------------- 248
T N +L L + G+ E A +F E+ + C P+ ++++ +H +
Sbjct: 489 STYNAVLSALARGGRWEQAEKLFAEMEERDC-KPDEYSYSSLLHAYANAKRLDKMKALSD 547
Query: 249 ----------------------KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQY 286
K+N + EA+ E++ C + + ++ Y +
Sbjct: 548 DIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNR 607
Query: 287 NFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFN 346
KV ++L M+ + TY ++M ++ GD E+ I ++K G +PD +N
Sbjct: 608 MVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYN 667
Query: 347 CLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNK 406
+IY GR +++EA ++ EM +G+ PD T+N + + + E+A ++ M
Sbjct: 668 TVIYAYGRKGQMKEASRLFS-EMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYM-V 725
Query: 407 LEHCKPNVQTFHPLLKSCFKTGK 429
+ CKPN +T++ +++ + GK
Sbjct: 726 TQGCKPNERTYNSIVEGYCRNGK 748
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 119/261 (45%), Gaps = 46/261 (17%)
Query: 261 QEMKGHGC--HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLA 318
+E+ G G HP V++ T I+ R ++ LLD A G P+ YT ++S +
Sbjct: 130 RELHGEGVLHHPRVLA--TAIRVMARAGRLAEASALLD--AAPG--PDAGAYTALVSAFS 183
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDT 378
++G F +A+ + +M G +P +N +++ + + + V M E+GVAPD
Sbjct: 184 RAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDR 243
Query: 379 STFNTMIT-----------------------------------MFSHHGHHEKAFHVLEE 403
T+NT+I+ ++ H++A V++E
Sbjct: 244 YTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQE 303
Query: 404 MNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCR 463
M ++ C P+V T++ L+ S K G ++ ++ L + + D+ TYT +I GL R
Sbjct: 304 MERV-GCPPSVVTYNSLISSYVKDGLLEQAVA--LKQEMEVKGMKPDVVTYTTLISGLDR 360
Query: 464 ANKCEWAYLLFKEMIGHDITP 484
A K + A + + EM+ + P
Sbjct: 361 AGKIDAAIVEYDEMVRNGCKP 381
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 103/227 (45%), Gaps = 2/227 (0%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRF-SGAGQWEDAVRTFDELG 195
Y ++ +++D+M+AL +++ I N + K + S +A + F EL
Sbjct: 526 YSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELR 585
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVD 254
+ +N ++ K V + +K S I +A T+N +H + ++ +
Sbjct: 586 QKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCE 645
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
+ + + E+K G P SY+T+I +Y R+ + L EM+ G P+VVTY +
Sbjct: 646 KCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFV 705
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
+ FEEAI + M G KP+ R +N ++ R ++ +A
Sbjct: 706 KSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDA 752
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK----EGKVELARSVFLEL 229
V+ + GQ ++A R F E+ GL+ + T N+ + + E +EL R ++
Sbjct: 669 VIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVR--YMVT 726
Query: 230 KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
+ C PN T+N + G+C+ ++ +A+ + +
Sbjct: 727 QGC-KPNERTYNSIVEGYCRNGKLTDAKIFVSNL 759
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 180/375 (48%), Gaps = 40/375 (10%)
Query: 155 ALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLC 214
A + + G + +NT V+ + +++DAV + +G + + T N +LDTLC
Sbjct: 195 AFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLC 254
Query: 215 KEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI 273
K+G++ AR + +++KS + PN +T+NI ++G+CK+ + EA I+ M + P V
Sbjct: 255 KKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVW 314
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
+Y+ +I C + + ++L DEM+ P+VV+Y T+++ + EA ++ E+M
Sbjct: 315 TYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEM 374
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
G KP++ N ++ + ++ +A +M E+G +PD T+NT+I + G+
Sbjct: 375 SEKGVKPNAVTHNIMVKWYCKEGKMDDASNTI-TKMEESGFSPDCVTYNTLINGYCKAGN 433
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC----------------------------- 424
+AF ++EM + ++ K + T + +L++
Sbjct: 434 MGEAFRTMDEMGR-KNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYG 492
Query: 425 ------FKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
FK G D L +L D+M K + + TY +I GLC+ K E A E++
Sbjct: 493 TLIVGYFKDGNVDRAL-KLWDEMKEKEIIPSTV-TYNCIIGGLCQCGKTEQAISKLNELL 550
Query: 479 GHDITPRYQTCRLIL 493
+ P T IL
Sbjct: 551 ESGLLPDETTYNTIL 565
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 192/374 (51%), Gaps = 6/374 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++D L K ++ R LL +M S+G + NT ++ + G ++A + +
Sbjct: 246 YNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMT 305
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVD 254
L + T N+L++ LC EG++E A + E+++ + P+ ++N I+G + +++
Sbjct: 306 QNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKIS 365
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA ++EM G P ++++ +++ YC++ + +M+ G P+ VTY T++
Sbjct: 366 EAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLI 425
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
+ K+G+ EA R ++M K DS N ++ TL R +++EA Y + G
Sbjct: 426 NGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEA-YKLLSSARKRGY 484
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
D ++ T+I + G+ ++A + +EM K + P+ T++ ++ + GKT++ +
Sbjct: 485 FIDEVSYGTLIVGYFKDGNVDRALKLWDEM-KEKEIIPSTVTYNCIIGGLCQCGKTEQAI 543
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
S+L ++++ L D TTY ++HG CR E A+ +M+ + P TC ++L
Sbjct: 544 SKL-NELLESGLLP-DETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLR 601
Query: 495 EVKQKHMYDAAEKI 508
+ + + + A K+
Sbjct: 602 GLCMEGVLEKALKL 615
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 197/384 (51%), Gaps = 18/384 (4%)
Query: 137 YEMMVDIL---GKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWE---DAVR 189
Y M+++ L G++ + ++R +E + +V+ NT+ +G +W +A +
Sbjct: 316 YNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTL------INGCLEWSKISEAFK 369
Query: 190 TFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWC 248
+E+ G++ N T N+++ CKEGK++ A + +++ S P+ T+N I+G+C
Sbjct: 370 LLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYC 429
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
K + EA T+ EM ++ +TI+++ CR+ + Y+LL + +G + V
Sbjct: 430 KAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEV 489
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
+Y T++ K G+ + A+++ ++MK P + +NC+I L + + ++A+ E
Sbjct: 490 SYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLN-E 548
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
+ E+G+ PD +T+NT++ + G EKAF +M + KP+V T + LL+ G
Sbjct: 549 LLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVE-NSFKPDVFTCNILLRGLCMEG 607
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
++ L +L + V+K ++D TY +I LC+ + + A+ L EM ++ P + T
Sbjct: 608 VLEKAL-KLFNTWVSKGK-AIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYT 665
Query: 489 CRLILDEVKQKHMYDAAEKIEAVM 512
I+ + AE+ + M
Sbjct: 666 YNAIITALTDSGRIREAEEFMSKM 689
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 166/339 (48%), Gaps = 9/339 (2%)
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK---EGKVELARSVFLE-LKSCIPPN 236
+GQ A + F ++ L N T N LL++L + V +R F + +K I PN
Sbjct: 148 SGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPN 207
Query: 237 AHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLD 296
+TFNI I+G+C N+ +A + M + C P ++Y+TI+ + C++ +LL
Sbjct: 208 VNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLM 267
Query: 297 EMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRAS 356
+M+++G PN TY ++ K G +EA + E M PD +N LI L
Sbjct: 268 DMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEG 327
Query: 357 RVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQT 416
R++EA + + EM + PD ++NT+I +AF +LEEM++ + KPN T
Sbjct: 328 RIEEA-FKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSE-KGVKPNAVT 385
Query: 417 FHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKE 476
+ ++K K GK D+ + + + + S D TY +I+G C+A A+ E
Sbjct: 386 HNIMVKWYCKEGKMDDASNTITK--MEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDE 443
Query: 477 MIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEAVMKK 514
M ++ T IL + ++K + +A + + + K+
Sbjct: 444 MGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKR 482
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 118/236 (50%), Gaps = 3/236 (1%)
Query: 144 LGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKN 202
L + +++++ LL K G+ + + ++ + G + A++ +DE+ + +
Sbjct: 463 LCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPS 522
Query: 203 TETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQ 261
T T N ++ LC+ GK E A S EL +S + P+ T+N +HG+C+ V++A
Sbjct: 523 TVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHN 582
Query: 262 EMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSG 321
+M + P V + + +++ C + K +L + ++G + VTY T+++ L K G
Sbjct: 583 KMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEG 642
Query: 322 DFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
++A + +M+ PD +N +I L + R++EA + +M E G PD
Sbjct: 643 RLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREA-EEFMSKMLEKGNLPD 697
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 99/214 (46%), Gaps = 6/214 (2%)
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
P + T + +Y+ +SG A +I +KMK + +P+ N L+ +L R +
Sbjct: 133 PSKALLDTAIGAYV-QSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSF 191
Query: 364 VYQV--EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLL 421
+ + + G+ P+ +TFN +I + + A L M K +C P+ T++ +L
Sbjct: 192 SREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKY-NCSPDNVTYNTIL 250
Query: 422 KSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHD 481
+ K G+ + L+D + L + TY ++++G C+ + A + + M ++
Sbjct: 251 DTLCKKGRLGDARDLLMD--MKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNN 308
Query: 482 ITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
+ P T ++++ + + + A K+ M+ L
Sbjct: 309 LLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENL 342
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 79/188 (42%), Gaps = 27/188 (14%)
Query: 156 LLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK 215
++E K + T N + +R G E A++ F+ + G +T T N L+ +LCK
Sbjct: 584 MVENSFKPDVFTCNIL---LRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCK 640
Query: 216 EGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHP---- 270
EG+++ A ++ E++ + P+ +T+N I R+ EA+ + +M G P
Sbjct: 641 EGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVL 700
Query: 271 -------------------CVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
++YS I+ C + + + E + +G + TY
Sbjct: 701 QLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYI 760
Query: 312 TVMSYLAK 319
+M L K
Sbjct: 761 NLMDGLIK 768
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 92/230 (40%), Gaps = 29/230 (12%)
Query: 145 GKVRQ-MDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNT 203
GK Q + ++ LLE T NTI + + G E A + +++ + +
Sbjct: 537 GKTEQAISKLNELLESGLLPDETTYNTI---LHGYCREGDVEKAFQFHNKMVENSFKPDV 593
Query: 204 ETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQE 262
T N+LL LC EG +E A +F + + T+N I CK R+D+A + E
Sbjct: 594 FTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSE 653
Query: 263 MKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN---------------- 306
M+ P +Y+ II + + E + +M +G P+
Sbjct: 654 MEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVLQLDKNETVVTSET 713
Query: 307 -------VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPD-SRFFNCL 348
V Y+ + L G +++A+RI + K G D S + N +
Sbjct: 714 SEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLM 763
>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
Length = 385
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 174/370 (47%), Gaps = 56/370 (15%)
Query: 122 RWAG--SCPGYEHSSE------IYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIA 172
RW G C +E Y ++ L K + + LLEEM G I + T
Sbjct: 34 RWPGRRGCGAAVQDAEEVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYT 93
Query: 173 KVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF---LEL 229
++ F + + +DA+R F++L G + T + L+D LCKEG+++ A +F ++
Sbjct: 94 TLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKS 153
Query: 230 KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFS 289
SC+P N T+N I G+C++ ++DEA ++ M G P V++Y+T++ +C+
Sbjct: 154 GSCMP-NTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLD 212
Query: 290 KVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
Y+LL++M +G PNVVT+T++M L + +A+ I +M+
Sbjct: 213 DAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMR--------------- 257
Query: 350 YTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH-VLEEMNKLE 408
+P T+NT++ + E+A +LEEM+
Sbjct: 258 ---------------------RKSCSPTVYTYNTILDGYCRVNQLEEARKFMLEEMD--- 293
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
C PNV +F+ +++ K ++ E + L + + + D+ YT VI LCR K +
Sbjct: 294 -CPPNVVSFNIMIRGLCKVNRSSEAME--LVEEARRRRCNPDVVMYTTVIDVLCREKKVD 350
Query: 469 WAYLLFKEMI 478
A ++++M+
Sbjct: 351 EACRVYRKML 360
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 158/339 (46%), Gaps = 16/339 (4%)
Query: 173 KVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--K 230
+ ++R+ G AV+ +E+ T T N L+ LCK + A + E+
Sbjct: 30 RALQRWPGRRGCGAAVQDAEEVPT------AVTYNSLISGLCKAERASEAYDLLEEMVYS 83
Query: 231 SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSK 290
CIP + T+ I G+CK + D+A +++ G P V++YS +I C++ +
Sbjct: 84 GCIP-DIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKE 142
Query: 291 VYELLDEMQAQG-CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
+L M G C PN VTY +++S + G +EA+ + E+M GS PD + L+
Sbjct: 143 AIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLM 202
Query: 350 YTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH 409
+ +R+ +A Y +M G+ P+ TF +++ A H+L EM + +
Sbjct: 203 NGFCKLARLDDA-YDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRR-KS 260
Query: 410 CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEW 469
C P V T++ +L + + +E +L++M ++ ++ ++I GLC+ N+
Sbjct: 261 CSPTVYTYNTILDGYCRVNQLEEARKFMLEEM----DCPPNVVSFNIMIRGLCKVNRSSE 316
Query: 470 AYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
A L +E P ++D + ++ D A ++
Sbjct: 317 AMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRV 355
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 147/320 (45%), Gaps = 11/320 (3%)
Query: 70 IISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKS--ALGIFRWAGSC 127
+IS + E + L ++ V + P + LI F KS AL +F +
Sbjct: 60 LISGLCKAERASEAYD-LLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVA- 117
Query: 128 PGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIA--KVMRRFSGAGQWE 185
G+ Y ++D L K ++ + L M K NT+ ++ F G+ +
Sbjct: 118 RGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMD 177
Query: 186 DAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFI 244
+A+ + + G + T L++ CK +++ A + ++ + + PN TF +
Sbjct: 178 EAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLM 237
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE-LLDEMQAQGC 303
G C+ NR+ +A + EM+ C P V +Y+TI+ YCR + + +L+EM C
Sbjct: 238 DGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLEEMD---C 294
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
PPNVV++ ++ L K EA+ + E+ + PD + +I L R +V EA
Sbjct: 295 PPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACR 354
Query: 364 VYQVEMPENGVAPDTSTFNT 383
VY+ + E G P++ T++T
Sbjct: 355 VYRKMLEEPGCLPNSITYST 374
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 149/300 (49%), Gaps = 21/300 (7%)
Query: 64 LPDI---DVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSAL 118
+PDI +I+ D+ + +Q V +P + LI + K A+
Sbjct: 86 IPDIFTYTTLITGFCKSKKSDDALRVFEQ-LVARGFRPDVVTYSCLIDGLCKEGRLKEAI 144
Query: 119 GIFRW---AGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKV 174
+F +GSC ++ Y ++ ++ +MD+ LLE M++ G + T +
Sbjct: 145 DLFGRMIKSGSC---MPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTL 201
Query: 175 MRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSC 232
M F + +DA +++ GL N T L+D LC+E ++ A + E+ KSC
Sbjct: 202 MNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSC 261
Query: 233 IPPNAHTFNIFIHGWCKINRVDEA-QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKV 291
P +T+N + G+C++N+++EA ++ ++EM C P V+S++ +I+ C+ S+
Sbjct: 262 -SPTVYTYNTILDGYCRVNQLEEARKFMLEEMD---CPPNVVSFNIMIRGLCKVNRSSEA 317
Query: 292 YELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM-KIVGSKPDSRFFNCLIY 350
EL++E + + C P+VV YTTV+ L + +EA R+ KM + G P+S ++ Y
Sbjct: 318 MELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLEEPGCLPNSITYSTFDY 377
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 103/210 (49%), Gaps = 3/210 (1%)
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
P VTY +++S L K+ EA + E+M G PD + LI ++ + +A+ V
Sbjct: 52 PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
++ ++ G PD T++ +I G ++A + M K C PN T++ L+
Sbjct: 112 FE-QLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGF 170
Query: 425 FKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
+ GK DE ++ LL+ M S D+ TYT +++G C+ + + AY L +M +TP
Sbjct: 171 CRMGKMDEAMN-LLERMAETGS-SPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTP 228
Query: 485 RYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
T ++D + +++ A I M++
Sbjct: 229 NVVTFTSLMDGLCRENRLSDAVHILGEMRR 258
>gi|326500578|dbj|BAK06378.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 546
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 171/355 (48%), Gaps = 21/355 (5%)
Query: 175 MRRFSGAGQWEDAVRTF-------DELGTFG--LEKNTETMNLLLDTLCKEGKVELARSV 225
+RR++ G+ A+R F D G T +N+ + LCKEG A +
Sbjct: 118 VRRYARLGRSSAALRAFHFLRRNPDRYTVDGDASPAATSLLNMAVGALCKEGHPRPAAKL 177
Query: 226 FLELKSC-----IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQ 280
+K C + P+ T+N+ + GW R+D+ EM G P V+SY T+I+
Sbjct: 178 ---VKRCRREGELAPDERTYNMLLDGWSTARRMDKVGKLWAEMCVAGVRPTVVSYGTLIK 234
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
+ CR + LLDEM+ +G N+VT ++ LA +G F +A + EK + G P
Sbjct: 235 AVCRVQQPDQAVSLLDEMRKEGIEANLVTCNPIVHALAHAGRFRDAYNLLEKFPLYGVAP 294
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
+ FN L+ + + A V + M G+ P T+N F+ G+ E ++
Sbjct: 295 NISTFNSLVLAYCKYGDLAGASGVLKAMM-GRGILPTAKTYNYFFVFFAKTGNVELGMNL 353
Query: 401 LEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHG 460
+M + P+ T++ L+K + + E + Q++ +M + D+ T T++IH
Sbjct: 354 YNKMVNNGYA-PDQTTYNLLVKMLCEANRL-ELVVQMIKEM-RANGFESDLATSTMLIHL 410
Query: 461 LCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
LCR+++ E A FK+M P+Y T R+++ E+K+ + + EK+ +M+ +
Sbjct: 411 LCRSHRFEEACAEFKDMFRRGHVPQYITYRMLMKELKRLGLVELEEKLTDLMRSV 465
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 120/274 (43%), Gaps = 17/274 (6%)
Query: 96 IQPSHYLVNKLIHRFKDDWKSALGIFR----WAGSC-PGYEHSSEIYEMMVDILGKVRQM 150
+ P N L+ D W +A + + WA C G + Y ++ + +V+Q
Sbjct: 187 LAPDERTYNMLL----DGWSTARRMDKVGKLWAEMCVAGVRPTVVSYGTLIKAVCRVQQP 242
Query: 151 DQMRALLEEMSK----GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETM 206
DQ +LL+EM K ++VT N I + + AG++ DA ++ +G+ N T
Sbjct: 243 DQAVSLLDEMRKEGIEANLVTCNPIVHAL---AHAGRFRDAYNLLEKFPLYGVAPNISTF 299
Query: 207 NLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKG 265
N L+ CK G + A V + I P A T+N F + K V+ +M
Sbjct: 300 NSLVLAYCKYGDLAGASGVLKAMMGRGILPTAKTYNYFFVFFAKTGNVELGMNLYNKMVN 359
Query: 266 HGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEE 325
+G P +Y+ +++ C V +++ EM+A G ++ T T ++ L +S FEE
Sbjct: 360 NGYAPDQTTYNLLVKMLCEANRLELVVQMIKEMRANGFESDLATSTMLIHLLCRSHRFEE 419
Query: 326 AIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
A + M G P + L+ L R V+
Sbjct: 420 ACAEFKDMFRRGHVPQYITYRMLMKELKRLGLVE 453
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 121/278 (43%), Gaps = 9/278 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM----SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y M++D R+MD++ L EM + +V+ T+ K + R Q + AV D
Sbjct: 194 YNMLLDGWSTARRMDKVGKLWAEMCVAGVRPTVVSYGTLIKAVCRVQ---QPDQAVSLLD 250
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKIN 251
E+ G+E N T N ++ L G+ A ++ + + PN TFN + +CK
Sbjct: 251 EMRKEGIEANLVTCNPIVHALAHAGRFRDAYNLLEKFPLYGVAPNISTFNSLVLAYCKYG 310
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
+ A ++ M G G P +Y+ + + N L ++M G P+ TY
Sbjct: 311 DLAGASGVLKAMMGRGILPTAKTYNYFFVFFAKTGNVELGMNLYNKMVNNGYAPDQTTYN 370
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
++ L ++ E +++ ++M+ G + D LI+ L R+ R +EA ++ +M
Sbjct: 371 LLVKMLCEANRLELVVQMIKEMRANGFESDLATSTMLIHLLCRSHRFEEACAEFK-DMFR 429
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH 409
G P T+ ++ G E + + M + H
Sbjct: 430 RGHVPQYITYRMLMKELKRLGLVELEEKLTDLMRSVPH 467
>gi|255660878|gb|ACU25608.1| pentatricopeptide repeat-containing protein [Verbena hispida]
Length = 484
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 192/388 (49%), Gaps = 14/388 (3%)
Query: 100 HYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEE 159
H LV ++H K + AL FRW +EH+ E + +++ILG+ +++ R +L +
Sbjct: 12 HELVYNVLHSSKTS-EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLD 70
Query: 160 M-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
M KG + ++ + G +++V+ F ++ G+E+ ++ N L + + G+
Sbjct: 71 MPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGR 130
Query: 219 VELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
+A+ F + L I P HTFN+ I G+ +V+ A ++MK P V++Y+T
Sbjct: 131 YMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNT 190
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+I Y R + + EM+ + P VVTYTT++ ++ +R+ E+MK G
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDXLRLVEEMKGFG 250
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP-DTSTFNTMITMFSHHGHHEK 396
KP++ ++ L+ L A ++ EA + + EM + +AP D S F +I+ G+ +
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMSEARVILK-EMMDKYLAPTDNSIFMRLISSHCKSGNLDA 309
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK-------HHLSL 449
A VL+ M +L + L+++ K G+ D+ + +LLD ++ K L L
Sbjct: 310 AADVLKAMIRLS-VPTEAGHYGXLIENFCKAGQYDKAV-KLLDKLIEKDIILRPQSTLHL 367
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEM 477
+ + Y +I LC + A L +++
Sbjct: 368 EPSAYNPMIEYLCNNGQAXKAETLVRQL 395
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 132/311 (42%), Gaps = 4/311 (1%)
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQ 257
E N ET +++ L + K+ AR + L++ K + + + + I + K V E+
Sbjct: 41 FEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESV 100
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
Q+M+ G + SY+ + + R+ + ++M ++G P T+ ++
Sbjct: 101 KMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGF 160
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
SG E A R E MK PD +N +I R +++EA Y VEM + P
Sbjct: 161 FLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEK-YFVEMKGRNIEPT 219
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
T+ T+I + + ++EEM KPN T+ LL K E +
Sbjct: 220 VVTYTTLIKGYVSVDQVDDXLRLVEEMKGF-GIKPNAITYSTLLPGLCNAEKMSEA-RVI 277
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVK 497
L +M++K+ D + + +I C++ + A + K MI + +++
Sbjct: 278 LKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGXLIENFC 337
Query: 498 QKHMYDAAEKI 508
+ YD A K+
Sbjct: 338 KAGQYDKAVKL 348
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 127/267 (47%), Gaps = 6/267 (2%)
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
+ ++++ A+ + +M G + +I SY ++ + ++ +M+ G +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIK 116
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
+Y + + + G + A R KM G +P FN +I+ + +V+ A ++ +
Sbjct: 117 SYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFE-D 175
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M ++PD T+NTMI + E+A EM K + +P V T+ L+K
Sbjct: 176 MKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEM-KGRNIEPTVVTYTTLIKGYVSVD 234
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ D+ L +L+++M + + TY+ ++ GLC A K A ++ KEM+ + P +
Sbjct: 235 QVDDXL-RLVEEM-KGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNS 292
Query: 489 C--RLILDEVKQKHMYDAAEKIEAVMK 513
RLI K ++ AA+ ++A+++
Sbjct: 293 IFMRLISSHCKSGNLDAAADVLKAMIR 319
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 170/346 (49%), Gaps = 5/346 (1%)
Query: 170 TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL 229
TI ++ F + DAV D++ G + + N ++D+LCK +V A F E+
Sbjct: 157 TIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEI 216
Query: 230 -KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
+ I PN T+ ++G C +R +A + +M P VI+YS ++ ++ +
Sbjct: 217 ERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKV 276
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
+ EL +EM P++VTY+++++ L +EA ++ + M G D +N L
Sbjct: 277 LEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTL 336
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
I +A RV++ + +++ EM + G+ +T T+NT+I F G +KA +M+
Sbjct: 337 INGFCKAKRVEDGMKLFR-EMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMD-FF 394
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
P++ T++ LL G+ ++ L + +DM K + LDI TYT VI G+C+ K E
Sbjct: 395 GISPDIWTYNILLGGLCDNGELEKALV-IFEDM-QKREMDLDIVTYTTVIRGMCKTGKVE 452
Query: 469 WAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
A+ LF + + P T ++ + K + E + MK+
Sbjct: 453 EAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQ 498
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 148/336 (44%), Gaps = 41/336 (12%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDA 187
GY+ Y ++D L K ++++ +E+ KG + T ++ + +W DA
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHG 246
R ++ + N T + LLD K GKV A+ +F E+ + I P+ T++ I+G
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C +R+DEA M GC V+SY+T+I +C+ +L EM +G N
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
VTY T++ ++GD ++A +M G PD I+T
Sbjct: 365 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPD-------IWT--------------- 402
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
+N ++ +G EKA + E+M K E ++ T+ +++ K
Sbjct: 403 --------------YNILLGGLCDNGELEKALVIFEDMQKREM-DLDIVTYTTVIRGMCK 447
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC 462
TGK +E S ++ L DI TYT ++ GLC
Sbjct: 448 TGKVEEAWSLFCS--LSLKGLKPDIVTYTTMMSGLC 481
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 131/268 (48%), Gaps = 5/268 (1%)
Query: 212 TLCKEGKVELARSVFLELKSCIP-PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHP 270
T ++ K+ A +F ++ P P+ FN + K+ + D ++M+ G
Sbjct: 59 TRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRN 118
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRIT 330
+ +++ +I +C + S +L +M G P+ VT ++++ + +A+ +
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178
Query: 331 EKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSH 390
+KM +G KPD +N +I +L + RV +A ++ E+ G+ P+ T+ ++ +
Sbjct: 179 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFK-EIERKGIRPNVVTYTALVNGLCN 237
Query: 391 HGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLD 450
A +L +M K + PNV T+ LL + K GK E +L ++MV + + D
Sbjct: 238 SSRWSDAARLLSDMIK-KKITPNVITYSALLDAFVKNGKVLEA-KELFEEMV-RMSIDPD 294
Query: 451 ITTYTLVIHGLCRANKCEWAYLLFKEMI 478
I TY+ +I+GLC ++ + A +F M+
Sbjct: 295 IVTYSSLINGLCLHDRIDEANQMFDLMV 322
>gi|242062032|ref|XP_002452305.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
gi|241932136|gb|EES05281.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
Length = 347
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 143/255 (56%), Gaps = 5/255 (1%)
Query: 230 KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFS 289
K C P+ T+N+ ++G C+ RVD+A ++ + +G P +SY+ +++ +
Sbjct: 10 KGC-APDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLFTAERWE 68
Query: 290 KVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
+L++EM +GCPPNVVT+ ++S+L + G E A+ + E++ G P+S +N L+
Sbjct: 69 DAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYNPLL 128
Query: 350 YTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH 409
+ + ++ +A+ ++ M G PD ++NT++T +G + A +L ++ K +
Sbjct: 129 HAFCKQKKMDKAMAFVEL-MVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQL-KGKG 186
Query: 410 CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEW 469
C P + +++ ++ K GKT E L +LLD+M++K L DI TYT + GLCR +K E
Sbjct: 187 CSPVLISYNTVIDGLTKAGKTKEAL-ELLDEMISK-GLQPDIITYTTIASGLCREDKIEE 244
Query: 470 AYLLFKEMIGHDITP 484
A F ++ I P
Sbjct: 245 AIRTFCKVQDMGIRP 259
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 140/279 (50%), Gaps = 7/279 (2%)
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSC 232
V++ A +WEDA + +E+ G N T N+L+ LC+ G VE A V ++ K
Sbjct: 57 VLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYG 116
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
PN+ ++N +H +CK ++D+A ++ M GC+P ++SY+T++ + CR
Sbjct: 117 CTPNSLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAI 176
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
+LL +++ +GC P +++Y TV+ L K+G +EA+ + ++M G +PD + + L
Sbjct: 177 DLLHQLKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGL 236
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
R +++EA+ + ++ + G+ P +N ++ A + M C P
Sbjct: 237 CREDKIEEAIRTF-CKVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMIS-NGCMP 294
Query: 413 NVQTFHPLLKSCFKTGKTDEC---LSQLLD-DMVNKHHL 447
N T+ L++ G E L QL +VNK +
Sbjct: 295 NESTYTILVEGLAYEGLVKEARDLLGQLCSRGVVNKKFM 333
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 159/309 (51%), Gaps = 8/309 (2%)
Query: 156 LLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLC 214
LL+EM KG + T V+ G+ +DA+ + L ++G E NT + N++L L
Sbjct: 3 LLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLF 62
Query: 215 KEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCV 272
+ E A + E+ K C PPN TFN+ I C+ V+ A ++++ +GC P
Sbjct: 63 TAERWEDAEKLMEEMAHKGC-PPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNS 121
Query: 273 ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEK 332
+SY+ ++ ++C+Q K ++ M ++GC P++V+Y T+++ L ++G+ + AI + +
Sbjct: 122 LSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQ 181
Query: 333 MKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
+K G P +N +I L +A + +EA+ + EM G+ PD T+ T+ +
Sbjct: 182 LKGKGCSPVLISYNTVIDGLTKAGKTKEALELLD-EMISKGLQPDIITYTTIASGLCRED 240
Query: 393 HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
E+A ++ + +P V ++ +L K +T + L M++ + + +
Sbjct: 241 KIEEAIRTFCKVQDM-GIRPTVVLYNAILLGLCKRRETHNAI-DLFSYMISNGCMP-NES 297
Query: 453 TYTLVIHGL 461
TYT+++ GL
Sbjct: 298 TYTILVEGL 306
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 151/322 (46%), Gaps = 5/322 (1%)
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHG 246
++ DE+ G + T N++L+ +C+EG+V+ A L S PN ++NI + G
Sbjct: 1 MKLLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKG 60
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
R ++A+ ++EM GC P V++++ +I CR+ E+L+++ GC PN
Sbjct: 61 LFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPN 120
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
++Y ++ K ++A+ E M G PD +N L+ L R V A+ +
Sbjct: 121 SLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLH 180
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
++ G +P ++NT+I + G ++A +L+EM + +P++ T+ + +
Sbjct: 181 -QLKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMIS-KGLQPDIITYTTIASGLCR 238
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
K +E + V + + Y ++ GLC+ + A LF MI + P
Sbjct: 239 EDKIEEAIRTFCK--VQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNE 296
Query: 487 QTCRLILDEVKQKHMYDAAEKI 508
T ++++ + + + A +
Sbjct: 297 STYTILVEGLAYEGLVKEARDL 318
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 119/223 (53%), Gaps = 5/223 (2%)
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
+LLDEM+ +GC P+++TY V++ + + G ++A+ E + G +P++ +N ++ L
Sbjct: 2 KLLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGL 61
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
A R ++A + + EM G P+ TFN +I+ G E A VLE++ K C P
Sbjct: 62 FTAERWEDAEKLME-EMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKY-GCTP 119
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
N +++PLL + K K D+ ++ ++ MV++ DI +Y ++ LCR + + A
Sbjct: 120 NSLSYNPLLHAFCKQKKMDKAMA-FVELMVSRGCYP-DIVSYNTLLTALCRNGEVDVAID 177
Query: 473 LFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEAVMKK 514
L ++ G +P + ++D + K +A E ++ ++ K
Sbjct: 178 LLHQLKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISK 220
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ L + ++D LL ++ KG L + V+ + AG+ ++A+ DE+
Sbjct: 159 YNTLLTALCRNGEVDVAIDLLHQLKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMI 218
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDE 255
+ GL+ + T + LC+E K+E A I +CK
Sbjct: 219 SKGLQPDIITYTTIASGLCREDKIEEA---------------------IRTFCK------ 251
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
+Q+M G P V+ Y+ I+ C++ +L M + GC PN TYT ++
Sbjct: 252 ----VQDM---GIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTILVE 304
Query: 316 YLAKSGDFEEA 326
LA G +EA
Sbjct: 305 GLAYEGLVKEA 315
>gi|225429339|ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
[Vitis vinifera]
Length = 811
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 184/372 (49%), Gaps = 24/372 (6%)
Query: 145 GKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNT 203
G+ R+ + +EE+ K ++T N I V + W V D + + G+ ++
Sbjct: 214 GRYREAVMVFKKMEEVGCKPTLITYNVILNVYGKM--GMPWNKMVGLVDRMKSAGIAPDS 271
Query: 204 ETMNLLLDTLCKEGKV-ELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQ 261
T N L+ + C+ G + E A V E+K + P+ T+N + + K R EA +Q
Sbjct: 272 YTYNTLI-SCCRRGNLYEEAAGVLKEMKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQ 330
Query: 262 EMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSG 321
EM+G+GC P +++Y+++I +Y R EL ++M +G P+V TYTT++S K+G
Sbjct: 331 EMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQMVEKGIKPDVFTYTTLLSGFEKAG 390
Query: 322 DFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTF 381
+ A++I E+M+ G KP+ FN LI G + E + V++ ++ +PD T+
Sbjct: 391 KDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFE-DIKTFQCSPDIVTW 449
Query: 382 NTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS---QLL 438
NT++++F +G + V +EM + P TF+ L+ S + G D+ ++ ++L
Sbjct: 450 NTLLSVFGQNGMDSEVSGVFKEMKRAGFV-PERDTFNTLISSYSRCGSFDQAMAVYKRML 508
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT-CRLILDEVK 497
+ VN D+++Y V+ L R + + + EM P T C L+
Sbjct: 509 EAGVNP-----DLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLL----- 558
Query: 498 QKHMYDAAEKIE 509
H Y ++IE
Sbjct: 559 --HAYANGKEIE 568
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 146/340 (42%), Gaps = 39/340 (11%)
Query: 202 NTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTI 260
N + +++ L K G+V A S+ L K + + + I + R EA
Sbjct: 164 NGSIIAVIISILGKGGRVSAAASLLHNLCKDGFDVDVYAYTSMITAFTSNGRYREAVMVF 223
Query: 261 QEMKGHGCHPCVISYSTIIQSYCRQ-YNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK 319
++M+ GC P +I+Y+ I+ Y + ++K+ L+D M++ G P+ TY T++S +
Sbjct: 224 KKMEEVGCKPTLITYNVILNVYGKMGMPWNKMVGLVDRMKSAGIAPDSYTYNTLISCCRR 283
Query: 320 SGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV------------ 367
+EEA + ++MK+ G PD +N L+ G++ R +EA+ V Q
Sbjct: 284 GNLYEEAAGVLKEMKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVT 343
Query: 368 ----------------------EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMN 405
+M E G+ PD T+ T+++ F G + A + EEM
Sbjct: 344 YNSLISAYARDGLLEDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMR 403
Query: 406 KLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRAN 465
E CKPN+ TF+ L+K GK E + D + S DI T+ ++ +
Sbjct: 404 N-EGCKPNICTFNALIKMHGNRGKFTEMMKVFED--IKTFQCSPDIVTWNTLLSVFGQNG 460
Query: 466 KCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
+FKEM P T ++ + +D A
Sbjct: 461 MDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQA 500
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 152/335 (45%), Gaps = 17/335 (5%)
Query: 147 VRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETM 206
V+ ++MR E K +I T N + K+ G++ + ++ F+++ TF + T
Sbjct: 396 VQIFEEMR---NEGCKPNICTFNALIKM---HGNRGKFTEMMKVFEDIKTFQCSPDIVTW 449
Query: 207 NLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKG 265
N LL + G VF E+K + P TFN I + + D+A + M
Sbjct: 450 NTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLE 509
Query: 266 HGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEE 325
G +P + SY+ ++ + R + + ++L EM+ C PN +TY +++ A + E
Sbjct: 510 AGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIER 569
Query: 326 AIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMI 385
+ E++ +P + L+ + + E + +E+ + G +PD +T N M+
Sbjct: 570 MCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAF-LELRQRGFSPDITTLNAMV 628
Query: 386 TMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG---KTDECLSQLLDDMV 442
+++ KA +L+ M K P++ T++ L+ ++ +++E L ++L +
Sbjct: 629 SIYGRRQMVAKANEILDCM-KRGGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKGI 687
Query: 443 NKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
DI +Y VI+ CR + A + EM
Sbjct: 688 RP-----DIISYNTVIYAYCRNGRMRDASRVLSEM 717
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 155/352 (44%), Gaps = 41/352 (11%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
+ ++ + G+ ++ + +EM + G + +T ++ +S G ++ A+ + +
Sbjct: 449 WNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRML 508
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVD 254
G+ + + N +L L + G + + V E+K PN T+ +H + ++
Sbjct: 509 EAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIE 568
Query: 255 -----------------------------------EAQWTIQEMKGHGCHPCVISYSTII 279
E + E++ G P + + + ++
Sbjct: 569 RMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLELRQRGFSPDITTLNAMV 628
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
Y R+ +K E+LD M+ G P++ TY ++M ++S +FE + I ++ G +
Sbjct: 629 SIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKGIR 688
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
PD +N +IY R R+++A V EM E+G APD T+NT I ++ +A
Sbjct: 689 PDIISYNTVIYAYCRNGRMRDASRVLS-EMRESGPAPDIITYNTFIASYAADSMFVEAID 747
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVN-KHHLSLD 450
V+ M K CKPN T++ ++ K + DE S ++++ H+S+D
Sbjct: 748 VVCYMIK-HGCKPNQSTYNSIVDWYCKLNRRDEA-SMFVNNLRKLDPHISMD 797
>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
Length = 670
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 174/398 (43%), Gaps = 15/398 (3%)
Query: 120 IFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRF 178
IF+ Y + +++ + + +L+ M + ++ + + +
Sbjct: 76 IFKSGPKMGSYRLGDSTFYSLINNYANLGDFKSLEKVLDRMKCEKRVIFEKCFIVIFKAY 135
Query: 179 SGAGQWEDAVRTFDELGT-FGLEKNTETMNLLLDTLCKEG----KVELARSVFLELKSCI 233
A E AV FD + F ++ ++ N +L+ + +EG +E V I
Sbjct: 136 GKAHLPEKAVDLFDRMACEFECKRTGKSFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSI 195
Query: 234 PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
PN TFN+ I CK+ VD+A ++M C P V +Y T++ C+ +
Sbjct: 196 SPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVS 255
Query: 294 LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLG 353
LLDEMQ GC P+ VT+ +++ L K GD A ++ + M + G P+ +N LI+ L
Sbjct: 256 LLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLC 315
Query: 354 RASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPN 413
++++A+ + M + P+ T+ T+I G VL M + +C N
Sbjct: 316 LKGKLEKAISLLD-RMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCV-N 373
Query: 414 VQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLL 473
+ L+ FK GK+ E + L +M K + L+ Y+ VI GLCR K + A +
Sbjct: 374 EYVYSTLISGLFKEGKSQEAM-HLFKEMTVKGY-ELNTIVYSAVIDGLCRDGKPDDAVEV 431
Query: 474 FKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAV 511
EM TP TC ++ K ++A AV
Sbjct: 432 LSEMTNKGCTPNAYTCSSLM-----KGFFEAGNSHRAV 464
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 164/367 (44%), Gaps = 8/367 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++D L K ++D+ +LL+EM G + T ++ G A + D +
Sbjct: 237 YCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMF 296
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS--CIPPNAHTFNIFIHGWCKINRV 253
G N T N L+ LC +GK+E A S+ + S C+P N T+ I+G K R
Sbjct: 297 LKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVP-NVVTYGTIINGLVKQGRA 355
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
+ + M+ G YST+I ++ + L EM +G N + Y+ V
Sbjct: 356 LDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAV 415
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
+ L + G ++A+ + +M G P++ + L+ A AV V++ +M ++
Sbjct: 416 IDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWK-DMAKHN 474
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
+ ++ +I G ++A V +M + CKP+V + ++ G ++
Sbjct: 475 FTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLG-KGCKPDVVAYSSMINGLSIAGLVEDA 533
Query: 434 LSQLLDDMVNKHHLSL-DITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLI 492
+ QL ++M+ + S D+ TY ++++ LC+ + A L M+ P TC +
Sbjct: 534 M-QLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIF 592
Query: 493 LDEVKQK 499
L +++K
Sbjct: 593 LRMLREK 599
>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
Length = 766
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 101/332 (30%), Positives = 162/332 (48%), Gaps = 7/332 (2%)
Query: 154 RALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTL 213
R +++ + IVT N + V + A W++ V + G+ + T N L+
Sbjct: 178 RRMVDSGVQPAIVTYNVVLHVYSKM--AVPWKEVVELVASMKEHGVAPDRYTYNTLISCC 235
Query: 214 CKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCV 272
+ + A VF E+K S P+ TFN + + K R DEA IQEM+ GC P V
Sbjct: 236 RRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSV 295
Query: 273 ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEK 332
++Y+++I SY + + L EM+ +G P+VVTYTT++S L ++G + AI ++
Sbjct: 296 VTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDE 355
Query: 333 MKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
M G KP+ +N LI G + E + V+ E G PD T+NT++ +F +G
Sbjct: 356 MVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFD-EFRSAGFVPDIVTWNTLLAVFGQNG 414
Query: 393 HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
+ V +EM K + P T+ L+ S + G D + Q+ M+ + + D++
Sbjct: 415 LDSEVSGVFKEMKKAGYI-PERDTYVSLISSYSRCGLFDLAM-QIYKRMM-EAGIYPDVS 471
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
TY V+ L R + E A LF EM D P
Sbjct: 472 TYNAVLSALARGGRWEQAEKLFAEMEERDCKP 503
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 179/391 (45%), Gaps = 15/391 (3%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAV 188
G H + + ++ + ++ + ALL+ + FS AG++ DAV
Sbjct: 118 GVLHHPRVLATAIRVMARAGRLAEASALLDAAPGPDAGAYTALVSA---FSRAGRFRDAV 174
Query: 189 RTFDELGTFGLEKNTETMNLLLDTLCK-----EGKVELARSVFLELKSCIPPNAHTFNIF 243
F + G++ T N++L K + VEL S+ + + P+ +T+N
Sbjct: 175 AVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASM---KEHGVAPDRYTYNTL 231
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
I + EA EMK G P +++++++ Y + + E++ EM+ GC
Sbjct: 232 ISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGC 291
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
PP+VVTY +++S K G E+A+ + ++M++ G KPD + LI L RA ++ A+
Sbjct: 292 PPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIV 351
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
Y EM NG P+ T+N +I M G + V +E P++ T++ LL +
Sbjct: 352 EYD-EMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFV-PDIVTWNTLL-A 408
Query: 424 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
F D +S + +M ++ + TY +I R + A ++K M+ I
Sbjct: 409 VFGQNGLDSEVSGVFKEMKKAGYIP-ERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIY 467
Query: 484 PRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
P T +L + + ++ AEK+ A M++
Sbjct: 468 PDVSTYNAVLSALARGGRWEQAEKLFAEMEE 498
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 97/436 (22%), Positives = 193/436 (44%), Gaps = 46/436 (10%)
Query: 82 EVFQSLKQDHVCNAIQPSHYLVNKLIH--RFKDDWKSALGIFRWAGSCPGYEHSSEIYEM 139
E+ S+K+ + + P Y N LI R + +K A +F + G+E +
Sbjct: 211 ELVASMKE----HGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKAS-GFEPDKVTFNS 265
Query: 140 MVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGL 199
++D+ GK R+ D+ +++EM + G
Sbjct: 266 LLDVYGKARRHDEAIEVIQEMER----------------------------------VGC 291
Query: 200 EKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQW 258
+ T N L+ + K+G +E A ++ E++ + P+ T+ I G + ++D A
Sbjct: 292 PPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIV 351
Query: 259 TIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLA 318
EM +GC P + +Y+ +I+ + + F ++ + DE ++ G P++VT+ T+++
Sbjct: 352 EYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFG 411
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDT 378
++G E + ++MK G P+ + LI + R A+ +Y+ M E G+ PD
Sbjct: 412 QNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYK-RMMEAGIYPDV 470
Query: 379 STFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLL 438
ST+N +++ + G E+A + EM + + CKP+ ++ LL + + D+ + L
Sbjct: 471 STYNAVLSALARGGRWEQAEKLFAEMEERD-CKPDEYSYSSLLHAYANAKRLDK-MKALS 528
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQ 498
DD+ ++ + TLV+ + N A F E+ + ++ +
Sbjct: 529 DDIYSERIEPHNWLVKTLVLVN-SKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGK 587
Query: 499 KHMYDAAEKIEAVMKK 514
M EKI ++MK+
Sbjct: 588 NRMVRKVEKILSLMKE 603
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 141/287 (49%), Gaps = 10/287 (3%)
Query: 178 FSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNA 237
SG E A EL G+ + + + + + G++ A ++ L + P+A
Sbjct: 98 LSGLPGAELAAVAARELHGEGVLHHPRVLATAIRVMARAGRLAEASAL---LDAAPGPDA 154
Query: 238 HTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCR-QYNFSKVYELLD 296
+ + + + R +A + M G P +++Y+ ++ Y + + +V EL+
Sbjct: 155 GAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVA 214
Query: 297 EMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRAS 356
M+ G P+ TY T++S + ++EA ++ ++MK G +PD FN L+ G+A
Sbjct: 215 SMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKAR 274
Query: 357 RVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQT 416
R EA+ V Q EM G P T+N++I+ + G E+A + +EM +++ KP+V T
Sbjct: 275 RHDEAIEVIQ-EMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEM-EVKGMKPDVVT 332
Query: 417 FHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI--HGL 461
+ L+ + GK D + + D+MV ++ ++ TY +I HG+
Sbjct: 333 YTTLISGLDRAGKIDAAIVE-YDEMV-RNGCKPNLCTYNALIKMHGV 377
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/383 (21%), Positives = 169/383 (44%), Gaps = 50/383 (13%)
Query: 90 DHVCNAIQPSHYLVNKLI--HRFKDDWKSALGIF---RWAGSCPGYEHSSEIYEMMVDIL 144
+ V N +P+ N LI H + + + +F R AG P + ++ +
Sbjct: 355 EMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIV----TWNTLLAVF 410
Query: 145 GKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNT 203
G+ ++ + +EM K G+I +T ++ +S G ++ A++ + + G+ +
Sbjct: 411 GQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDV 470
Query: 204 ETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWC------------- 248
T N +L L + G+ E A +F E+ + C P+ ++++ +H +
Sbjct: 471 STYNAVLSALARGGRWEQAEKLFAEMEERDC-KPDEYSYSSLLHAYANAKRLDKMKALSD 529
Query: 249 ----------------------KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQY 286
K+N + EA+ E++ C + + ++ Y +
Sbjct: 530 DIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNR 589
Query: 287 NFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFN 346
KV ++L M+ + TY ++M ++ GD E+ I ++K G +PD +N
Sbjct: 590 MVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYN 649
Query: 347 CLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNK 406
+IY GR +++EA ++ EM +G+ PD T+N + + + E+A ++ M
Sbjct: 650 TVIYAYGRKGQMKEASRLFS-EMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYM-V 707
Query: 407 LEHCKPNVQTFHPLLKSCFKTGK 429
+ CKPN +T++ +++ + GK
Sbjct: 708 TQGCKPNERTYNSIVEGYCRNGK 730
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 120/266 (45%), Gaps = 46/266 (17%)
Query: 256 AQWTIQEMKGHGC--HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
A +E+ G G HP V++ T I+ R ++ LLD A G P+ YT +
Sbjct: 107 AAVAARELHGEGVLHHPRVLA--TAIRVMARAGRLAEASALLD--AAPG--PDAGAYTAL 160
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
+S +++G F +A+ + +M G +P +N +++ + + + V M E+G
Sbjct: 161 VSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHG 220
Query: 374 VAPDTSTFNTMIT-----------------------------------MFSHHGHHEKAF 398
VAPD T+NT+I+ ++ H++A
Sbjct: 221 VAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAI 280
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
V++EM ++ C P+V T++ L+ S K G ++ ++ L + + D+ TYT +I
Sbjct: 281 EVIQEMERV-GCPPSVVTYNSLISSYVKDGLLEQAVA--LKQEMEVKGMKPDVVTYTTLI 337
Query: 459 HGLCRANKCEWAYLLFKEMIGHDITP 484
GL RA K + A + + EM+ + P
Sbjct: 338 SGLDRAGKIDAAIVEYDEMVRNGCKP 363
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 103/227 (45%), Gaps = 2/227 (0%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRF-SGAGQWEDAVRTFDELG 195
Y ++ +++D+M+AL +++ I N + K + S +A + F EL
Sbjct: 508 YSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELR 567
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVD 254
+ +N ++ K V + +K S I +A T+N +H + ++ +
Sbjct: 568 QKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCE 627
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
+ + + E+K G P SY+T+I +Y R+ + L EM+ G P+VVTY +
Sbjct: 628 KCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFV 687
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
+ FEEAI + M G KP+ R +N ++ R ++ +A
Sbjct: 688 KSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDA 734
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK----EGKVELARSVFLEL 229
V+ + GQ ++A R F E+ GL+ + T N+ + + E +EL R ++
Sbjct: 651 VIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVR--YMVT 708
Query: 230 KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
+ C PN T+N + G+C+ ++ +A+ + +
Sbjct: 709 QGC-KPNERTYNSIVEGYCRNGKLTDAKIFVSNL 741
>gi|449444614|ref|XP_004140069.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
gi|449528063|ref|XP_004171026.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
Length = 536
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 112/475 (23%), Positives = 204/475 (42%), Gaps = 75/475 (15%)
Query: 59 VDSPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSAL 118
+ PR PD+D ++ VH + S C ++ + + V ++ + + D+ +L
Sbjct: 46 IPEPRGPDLD-FVNVVH-----SHLIHSDWSKLDCLSMGLTAFRVKHILLKTQKDYVLSL 99
Query: 119 GIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM------------------ 160
F W + H+ E + +++ IL K R+ ++L +
Sbjct: 100 EFFNWVATQNPSSHTLETHCIILHILTKRRKFKSAESILRSIIESCSIDFPSKLFESLLY 159
Query: 161 ------SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLC 214
S H+ L + + F+ ++ +A TF + +G E+ N L +L
Sbjct: 160 SYRLCDSSPHVFDL-----LFKTFAHLKKFRNASDTFCRMKDYGFLPTVESCNAYLSSLL 214
Query: 215 KEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI 273
+ ++A + + E++ S I PN++T N+ I CK+ R+D+A +EM G P V
Sbjct: 215 NFSRGDIALAFYREMRRSRIYPNSYTLNLVICACCKLGRLDKANVVFEEMGTMGFSPNVA 274
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
SY+T+I YC + S +L M+ G PP+VVT+ T+++ K G +EA ++ +M
Sbjct: 275 SYNTLIAGYCNKGLLSSAMKLRSVMEKNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEM 334
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
K + P + +N LI +A + +++ EM V D T+N +I G
Sbjct: 335 KGMSLSPTTVTYNILINGYSKAGNCEMGNRLFE-EMSRFQVKADILTYNALILGLCKEGK 393
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
+KA +++ E+++ + PN TF L
Sbjct: 394 TKKAAYLVRELDE-KGLVPNASTFSAL--------------------------------- 419
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
I+G C + E A+ ++K MI TP QT R++L + YD A ++
Sbjct: 420 ----IYGQCVQKQSERAFQIYKSMIKSSFTPCDQTFRMLLSTFCENEDYDGAVQL 470
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 112/247 (45%), Gaps = 17/247 (6%)
Query: 145 GKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNT 203
G + ++R+++E+ +VT NT+ + F G+ ++A + F E+ L T
Sbjct: 287 GLLSSAMKLRSVMEKNGVPPDVVTFNTL---VNGFCKVGKLQEASKLFGEMKGMSLSPTT 343
Query: 204 ETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQE 262
T N+L++ K G E+ +F E+ + + T+N I G CK + +A + ++E
Sbjct: 344 VTYNILINGYSKAGNCEMGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLVRE 403
Query: 263 MKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGD 322
+ G P ++S +I C Q + +++ M P T+ ++S ++ D
Sbjct: 404 LDEKGLVPNASTFSALIYGQCVQKQSERAFQIYKSMIKSSFTPCDQTFRMLLSTFCENED 463
Query: 323 FEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV-----YQVEMPEN----- 372
++ A+++ E+M PD L LG+ +V+ A+ + Q +PE
Sbjct: 464 YDGAVQLLEEMLNRHKAPDVNNLYELCAGLGQCGKVKTAMMLCSELEAQRLLPEGFDKLK 523
Query: 373 --GVAPD 377
G+ PD
Sbjct: 524 AFGLLPD 530
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 105/223 (47%), Gaps = 17/223 (7%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAK--VMRRFSGAGQWEDAVRTFDEL 194
+ +V+ KV ++ + L EM KG ++ T+ ++ +S AG E R F+E+
Sbjct: 311 FNTLVNGFCKVGKLQEASKLFGEM-KGMSLSPTTVTYNILINGYSKAGNCEMGNRLFEEM 369
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRV 253
F ++ + T N L+ LCKEGK + A + EL + + PNA TF+ I+G C +
Sbjct: 370 SRFQVKADILTYNALILGLCKEGKTKKAAYLVRELDEKGLVPNASTFSALIYGQCVQKQS 429
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
+ A + M PC ++ ++ ++C ++ +LL+EM + P+V +
Sbjct: 430 ERAFQIYKSMIKSSFTPCDQTFRMLLSTFCENEDYDGAVQLLEEMLNRHKAPDVNNLYEL 489
Query: 314 MSYLAKSGDFEEAIRIT-------------EKMKIVGSKPDSR 343
+ L + G + A+ + +K+K G PD++
Sbjct: 490 CAGLGQCGKVKTAMMLCSELEAQRLLPEGFDKLKAFGLLPDNK 532
>gi|224065693|ref|XP_002301924.1| predicted protein [Populus trichocarpa]
gi|222843650|gb|EEE81197.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 176/378 (46%), Gaps = 19/378 (5%)
Query: 67 IDVIISKVHVGSSEDE--VFQSLKQDHVCNAIQPSHYLVNKLIHRFKD-----DWKSALG 119
+ VI + G +E+ +F+ ++ N +QP N L+ + D + +
Sbjct: 310 VTVIWGLGNCGRTEEAEAIFEEMRD----NGLQPRTRAYNALLRGYVKAGLLRDAEFVVS 365
Query: 120 IFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVMRRF 178
+G P + + Y +++D G + + R +L+EM ++ ++++ +
Sbjct: 366 EMERSGVLP----NEQTYSLLIDAYGNAERWESARIVLKEMEASNVQPNAYVFSRILASY 421
Query: 179 SGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNA 237
G+W+ + E+ G+ + N+L+DT K ++ A + F + S I P+
Sbjct: 422 RDKGEWQKTFQVLREMEDSGVRPDRIFYNVLIDTFGKFNCLDHAMATFDRMLSEGIEPDT 481
Query: 238 HTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDE 297
T+N + CK + D A+ +EM G PC +++ +I S+ Q + V LL
Sbjct: 482 ITWNTLVDCHCKAGKHDRAEELFEEMMEKGYLPCNTTFNIMINSFGDQERWDDVKNLLTN 541
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
M++QG PN VTYTT++ KSG F++AI + MK G KP S +N L+ +
Sbjct: 542 MRSQGLLPNAVTYTTLIDIYGKSGRFDDAIECLDDMKAAGLKPSSTMYNALLNAYAQRGL 601
Query: 358 VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTF 417
+AV + M ++G+ P N++I F +AF VL+ M K KP+V T+
Sbjct: 602 SDQAVSAFWA-MRDDGLKPSLLALNSLINAFGKDRRDVEAFVVLQYM-KENDLKPDVVTY 659
Query: 418 HPLLKSCFKTGKTDECLS 435
L+K+ K D+ S
Sbjct: 660 TTLMKALILVEKFDKVPS 677
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 158/329 (48%), Gaps = 5/329 (1%)
Query: 178 FSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPN 236
F+ AG + A+ + GL T T+ ++ L G+ E A ++F E++ + + P
Sbjct: 281 FAKAGDLDKALEFLGVVQGSGLSVKTATLVTVIWGLGNCGRTEEAEAIFEEMRDNGLQPR 340
Query: 237 AHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLD 296
+N + G+ K + +A++ + EM+ G P +YS +I +Y + +L
Sbjct: 341 TRAYNALLRGYVKAGLLRDAEFVVSEMERSGVLPNEQTYSLLIDAYGNAERWESARIVLK 400
Query: 297 EMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRAS 356
EM+A PN ++ +++ G++++ ++ +M+ G +PD F+N LI T G+ +
Sbjct: 401 EMEASNVQPNAYVFSRILASYRDKGEWQKTFQVLREMEDSGVRPDRIFYNVLIDTFGKFN 460
Query: 357 RVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQT 416
+ A+ + M G+ PDT T+NT++ G H++A + EEM + + N T
Sbjct: 461 CLDHAMATFD-RMLSEGIEPDTITWNTLVDCHCKAGKHDRAEELFEEMMEKGYLPCNT-T 518
Query: 417 FHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKE 476
F+ ++ S + D+ + LL +M ++ L + TYT +I ++ + + A +
Sbjct: 519 FNIMINSFGDQERWDD-VKNLLTNMRSQGLLP-NAVTYTTLIDIYGKSGRFDDAIECLDD 576
Query: 477 MIGHDITPRYQTCRLILDEVKQKHMYDAA 505
M + P +L+ Q+ + D A
Sbjct: 577 MKAAGLKPSSTMYNALLNAYAQRGLSDQA 605
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 166/379 (43%), Gaps = 18/379 (4%)
Query: 107 IHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIV 166
I+R D K + + W G+ + ++ + ++ LG V+ G V
Sbjct: 258 IYREIDRDKLEVDVQLWNDIIVGFAKAGDL-DKALEFLGVVQ------------GSGLSV 304
Query: 167 TLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF 226
T+ V+ G+ E+A F+E+ GL+ T N LL K G + A V
Sbjct: 305 KTATLVTVIWGLGNCGRTEEAEAIFEEMRDNGLQPRTRAYNALLRGYVKAGLLRDAEFVV 364
Query: 227 LEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQ 285
E+ +S + PN T+++ I + R + A+ ++EM+ P +S I+ SY +
Sbjct: 365 SEMERSGVLPNEQTYSLLIDAYGNAERWESARIVLKEMEASNVQPNAYVFSRILASYRDK 424
Query: 286 YNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFF 345
+ K +++L EM+ G P+ + Y ++ K + A+ ++M G +PD+ +
Sbjct: 425 GEWQKTFQVLREMEDSGVRPDRIFYNVLIDTFGKFNCLDHAMATFDRMLSEGIEPDTITW 484
Query: 346 NCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMN 405
N L+ +A + A +++ EM E G P +TFN MI F + ++L M
Sbjct: 485 NTLVDCHCKAGKHDRAEELFE-EMMEKGYLPCNTTFNIMINSFGDQERWDDVKNLLTNM- 542
Query: 406 KLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRAN 465
+ + PN T+ L+ K+G+ D+ + + LDDM L T Y +++ +
Sbjct: 543 RSQGLLPNAVTYTTLIDIYGKSGRFDDAI-ECLDDM-KAAGLKPSSTMYNALLNAYAQRG 600
Query: 466 KCEWAYLLFKEMIGHDITP 484
+ A F M + P
Sbjct: 601 LSDQAVSAFWAMRDDGLKP 619
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 141/317 (44%), Gaps = 14/317 (4%)
Query: 205 TMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEA--QWTIQ 261
T N L+ + +E A ++ ++ P + +++ I K NR + + Q +
Sbjct: 201 TYNALISACARNNDIEKALNLICRMREDGYPSDLVNYSLIIRSLMKNNRANSSILQKIYR 260
Query: 262 EMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSG 321
E+ V ++ II + + + K E L +Q G T TV+ L G
Sbjct: 261 EIDRDKLEVDVQLWNDIIVGFAKAGDLDKALEFLGVVQGSGLSVKTATLVTVIWGLGNCG 320
Query: 322 DFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTF 381
EEA I E+M+ G +P +R +N L+ +A +++A +V EM +GV P+ T+
Sbjct: 321 RTEEAEAIFEEMRDNGLQPRTRAYNALLRGYVKAGLLRDAEFVVS-EMERSGVLPNEQTY 379
Query: 382 NTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG---KTDECLSQLL 438
+ +I + + E A VL+EM + + +PN F +L S G KT + L ++
Sbjct: 380 SLLIDAYGNAERWESARIVLKEM-EASNVQPNAYVFSRILASYRDKGEWQKTFQVLREME 438
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQ 498
D V D Y ++I + N + A F M+ I P T ++D +
Sbjct: 439 DSGVRP-----DRIFYNVLIDTFGKFNCLDHAMATFDRMLSEGIEPDTITWNTLVDCHCK 493
Query: 499 KHMYDAAEKI-EAVMKK 514
+D AE++ E +M+K
Sbjct: 494 AGKHDRAEELFEEMMEK 510
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 145/350 (41%), Gaps = 50/350 (14%)
Query: 87 LKQDHVCNAIQPSHYLVNKLIHRFKD--DWKSALGIFRWAGSCPGYEHSSEIYEMMVDIL 144
LK+ N +QP+ Y+ ++++ ++D +W+ + R G Y +++D
Sbjct: 399 LKEMEASN-VQPNAYVFSRILASYRDKGEWQKTFQVLREMEDS-GVRPDRIFYNVLIDTF 456
Query: 145 GKVRQMDQMRALLEEM-SKG---HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLE 200
GK +D A + M S+G +T NT+ + AG+ + A F+E+ G
Sbjct: 457 GKFNCLDHAMATFDRMLSEGIEPDTITWNTLVDCHCK---AGKHDRAEELFEEMMEKGYL 513
Query: 201 KNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWT 259
T N+++++ + + + +++ ++S + PNA T+ I + K R D+A
Sbjct: 514 PCNTTFNIMINSFGDQERWDDVKNLLTNMRSQGLLPNAVTYTTLIDIYGKSGRFDDAIEC 573
Query: 260 IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK 319
+ +MK G P Y+ ++ +Y A+
Sbjct: 574 LDDMKAAGLKPSSTMYNALLNAY-----------------------------------AQ 598
Query: 320 SGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTS 379
G ++A+ M+ G KP N LI G+ R EA V Q M EN + PD
Sbjct: 599 RGLSDQAVSAFWAMRDDGLKPSLLALNSLINAFGKDRRDVEAFVVLQY-MKENDLKPDVV 657
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
T+ T++ +K V EEM L C P+ + +L+S K K
Sbjct: 658 TYTTLMKALILVEKFDKVPSVYEEM-ILSGCTPDRKA-RAMLRSALKYMK 705
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 119/262 (45%), Gaps = 11/262 (4%)
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
++I IH + ++ EA Q+ P ++Y+ +I + R + K L+ M+
Sbjct: 172 YSILIHALGQSEKLYEAFLLSQK---QNLTP--LTYNALISACARNNDIEKALNLICRMR 226
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAI--RITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
G P ++V Y+ ++ L K+ +I +I ++ + D + +N +I +A
Sbjct: 227 EDGYPSDLVNYSLIIRSLMKNNRANSSILQKIYREIDRDKLEVDVQLWNDIIVGFAKAGD 286
Query: 358 VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTF 417
+ +A+ V + +G++ T+T T+I + G E+A + EEM +P + +
Sbjct: 287 LDKALEFLGV-VQGSGLSVKTATLVTVIWGLGNCGRTEEAEAIFEEMRD-NGLQPRTRAY 344
Query: 418 HPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
+ LL+ K G + ++ + + + + + TY+L+I A + E A ++ KEM
Sbjct: 345 NALLRGYVKAGLLRD--AEFVVSEMERSGVLPNEQTYSLLIDAYGNAERWESARIVLKEM 402
Query: 478 IGHDITPRYQTCRLILDEVKQK 499
++ P IL + K
Sbjct: 403 EASNVQPNAYVFSRILASYRDK 424
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 170/346 (49%), Gaps = 5/346 (1%)
Query: 170 TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL 229
TI ++ F + DAV D++ G + + N ++D+LCK +V A F E+
Sbjct: 157 TIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEI 216
Query: 230 -KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
+ I PN T+ ++G C +R +A + +M P VI+YS ++ ++ +
Sbjct: 217 ERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKV 276
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
+ EL +EM P++VTY+++++ L +EA ++ + M G D +N L
Sbjct: 277 LEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTL 336
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
I +A RV++ + +++ EM + G+ +T T+NT+I F G +KA +M+
Sbjct: 337 INGFCKAKRVEDGMKLFR-EMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMD-FF 394
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
P++ T++ LL G+ ++ L + +DM K + LDI TYT VI G+C+ K E
Sbjct: 395 GISPDIWTYNILLGGLCDNGELEKALV-IFEDM-QKREMDLDIVTYTTVIRGMCKTGKVE 452
Query: 469 WAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
A+ LF + + P T ++ + K + E + MK+
Sbjct: 453 EAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQ 498
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 148/336 (44%), Gaps = 41/336 (12%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDA 187
GY+ Y ++D L K ++++ +E+ KG + T ++ + +W DA
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHG 246
R ++ + N T + LLD K GKV A+ +F E+ + I P+ T++ ++G
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNG 304
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C +R+DEA M GC V+SY+T+I +C+ +L EM +G N
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
VTY T++ ++GD ++A +M G PD I+T
Sbjct: 365 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPD-------IWT--------------- 402
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
+N ++ +G EKA + E+M K E ++ T+ +++ K
Sbjct: 403 --------------YNILLGGLCDNGELEKALVIFEDMQKREM-DLDIVTYTTVIRGMCK 447
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC 462
TGK +E S ++ L DI TYT ++ GLC
Sbjct: 448 TGKVEEAWSLFCS--LSLKGLKPDIVTYTTMMSGLC 481
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 131/268 (48%), Gaps = 5/268 (1%)
Query: 212 TLCKEGKVELARSVFLELKSCIP-PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHP 270
T ++ K+ A +F ++ P P+ FN + K+ + D ++M+ G
Sbjct: 59 TRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRN 118
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRIT 330
+ +++ +I +C + S +L +M G P+ VT ++++ + +A+ +
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178
Query: 331 EKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSH 390
+KM +G KPD +N +I +L + RV +A ++ E+ G+ P+ T+ ++ +
Sbjct: 179 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFK-EIERKGIRPNVVTYTALVNGLCN 237
Query: 391 HGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLD 450
A +L +M K + PNV T+ LL + K GK E +L ++MV + + D
Sbjct: 238 SSRWSDAARLLSDMIK-KKITPNVITYSALLDAFVKNGKVLEA-KELFEEMV-RMSIDPD 294
Query: 451 ITTYTLVIHGLCRANKCEWAYLLFKEMI 478
I TY+ +++GLC ++ + A +F M+
Sbjct: 295 IVTYSSLVNGLCLHDRIDEANQMFDLMV 322
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 184/392 (46%), Gaps = 47/392 (11%)
Query: 137 YEMMVDIL---GKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
+ +M+++L GK+++ +E + K ++VT NT V+ + G+ E A D
Sbjct: 239 FNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNT---VIHGYCSRGRVEGARMVLD 295
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKIN 251
+ G+E ++ T L+ +CK GK+E A + ++K + P A T+N I G+C
Sbjct: 296 IMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKG 355
Query: 252 -----------------------------------RVDEAQWTIQEMKGHGCHPCVISYS 276
++DEA I++M G P I+Y+
Sbjct: 356 DLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYN 415
Query: 277 TIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIV 336
+I YCR N K + L DEM ++G P +VTYT+++ L+K + A + EK+
Sbjct: 416 ILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIRE 475
Query: 337 GSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEK 396
G+ PD FN LI + A + + EM + + PD T+NT++ G E+
Sbjct: 476 GASPDLIMFNALIDGHCANGNLDRAFALLK-EMDKRNIVPDEVTYNTLMQGRCREGKVEE 534
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTL 456
A +L+EM K +P+ +++ L+ K G ++ + + D+M++ + + TY
Sbjct: 535 ARELLKEM-KRRGIRPDHISYNTLISGYSKRGDINDAFT-IRDEMLSI-GFNPTLLTYNA 591
Query: 457 VIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+I GLC+ + + A L KEM+ ITP T
Sbjct: 592 LIQGLCKNQQGDLAEELLKEMVSKGITPDDST 623
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 177/388 (45%), Gaps = 39/388 (10%)
Query: 133 SSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTF 191
SS +++M++ ++++ D + M KG + + T ++ F Q E +
Sbjct: 165 SSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLY 224
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKI 250
E+ ++ T N++++ LCKEGK++ A+ +++ + PN T+N IHG+C
Sbjct: 225 AEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSR 284
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
RV+ A+ + MK G P +Y ++I C+ + +L++M+ G P VTY
Sbjct: 285 GRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTY 344
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
T++ GD +A ++M P +N LI+ L ++ EA + + +M
Sbjct: 345 NTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIK-DMG 403
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM----------------------NKL- 407
++G+ PD+ T+N +I + G+ +KAF++ +EM N++
Sbjct: 404 DSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMK 463
Query: 408 -----------EHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTL 456
E P++ F+ L+ G D + LL +M +K ++ D TY
Sbjct: 464 AADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFA-LLKEM-DKRNIVPDEVTYNT 521
Query: 457 VIHGLCRANKCEWAYLLFKEMIGHDITP 484
++ G CR K E A L KEM I P
Sbjct: 522 LMQGRCREGKVEEARELLKEMKRRGIRP 549
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 154/327 (47%), Gaps = 10/327 (3%)
Query: 190 TFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWC 248
T D LGT K++ ++L+ C+ + + A F +K + P TFN + +
Sbjct: 157 TRDRLGT----KSSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFL 212
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
K+N+ + EM V +++ +I C++ K + + M+ G PNVV
Sbjct: 213 KLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVV 272
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
TY TV+ G E A + + MK G +PDS + LI + + +++EA + + +
Sbjct: 273 TYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILE-K 331
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M E G+ P T+NT+I + + G KAF +EM + P V T++ L+ + F G
Sbjct: 332 MKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVR-RAILPTVSTYNLLIHALFLEG 390
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
K DE ++ DM + D TY ++I+G CR + A+ L EMI I P T
Sbjct: 391 KMDEA-DGMIKDM-GDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVT 448
Query: 489 -CRLILDEVKQKHMYDAAEKIEAVMKK 514
LI K+ M A + E ++++
Sbjct: 449 YTSLIYVLSKRNRMKAADDLFEKIIRE 475
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 163/363 (44%), Gaps = 18/363 (4%)
Query: 35 IVSSSPIESYCSDGARLDHHQVLCVDSPRLPDIDV-----IISKVHVGSSEDE---VFQS 86
+ ++ I YCS G VL + R + D +IS + G +E + +
Sbjct: 272 VTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEK 331
Query: 87 LKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDIL 144
+K+ + P+ N LI + K D A G +R + Y +++ L
Sbjct: 332 MKEI----GLLPTAVTYNTLIDGYCNKGDLVKAFG-YRDEMVRRAILPTVSTYNLLIHAL 386
Query: 145 GKVRQMDQMRALLEEMSKGHIVTLNTIAKVM-RRFSGAGQWEDAVRTFDELGTFGLEKNT 203
+MD+ ++++M IV + ++ + G + A DE+ + G++
Sbjct: 387 FLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTL 446
Query: 204 ETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQE 262
T L+ L K +++ A +F ++ + P+ FN I G C +D A ++E
Sbjct: 447 VTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKE 506
Query: 263 MKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGD 322
M P ++Y+T++Q CR+ + ELL EM+ +G P+ ++Y T++S +K GD
Sbjct: 507 MDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGD 566
Query: 323 FEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFN 382
+A I ++M +G P +N LI L + + A + + EM G+ PD ST+
Sbjct: 567 INDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLK-EMVSKGITPDDSTYF 625
Query: 383 TMI 385
++I
Sbjct: 626 SLI 628
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 132/278 (47%), Gaps = 5/278 (1%)
Query: 88 KQDHVCNAIQPSHYLVNKLIHRFKDDWK--SALGIFRWAGSCPGYEHSSEIYEMMVDILG 145
+ + V AI P+ N LIH + K A G+ + G G S Y ++++
Sbjct: 364 RDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDS-GIVPDSITYNILINGYC 422
Query: 146 KVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTE 204
+ + L +EM SKG TL T ++ S + + A F+++ G +
Sbjct: 423 RCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLI 482
Query: 205 TMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
N L+D C G ++ A ++ E+ K I P+ T+N + G C+ +V+EA+ ++EM
Sbjct: 483 MFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEM 542
Query: 264 KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF 323
K G P ISY+T+I Y ++ + + + + DEM + G P ++TY ++ L K+
Sbjct: 543 KRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQG 602
Query: 324 EEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
+ A + ++M G PD + LI +G+ EA
Sbjct: 603 DLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSEA 640
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 89/201 (44%), Gaps = 12/201 (5%)
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
T+ S +A D + IT +G+K S F+ LI R +A + + M E
Sbjct: 139 TIESRVAGVKDVFHELAITRDR--LGTK-SSIVFDMLIRACCELKRGDDAFECFDM-MKE 194
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
GV P TFN M+++F E + + EM +L+ K V TF+ ++ K GK
Sbjct: 195 KGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLK-IKSTVYTFNIMINVLCKEGK-- 251
Query: 432 ECLSQLLDDMVNKHHLSL--DITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP-RYQT 488
L + D + + +L + ++ TY VIHG C + E A ++ M + P Y
Sbjct: 252 --LKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTY 309
Query: 489 CRLILDEVKQKHMYDAAEKIE 509
LI K + +A+ +E
Sbjct: 310 GSLISGMCKGGKLEEASGILE 330
>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 153/292 (52%), Gaps = 11/292 (3%)
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDE 255
GLE + T LL+ LC EGK++ ++ + L + PN +T+N+ I+ K + +E
Sbjct: 126 LGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANE 185
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
A +++M+ GC P V++YST+I YC + + + D M ++GC PNV TYT++M+
Sbjct: 186 ALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMN 245
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
K EEA+++ ++ G PD F +I L RA R A +++ + +G
Sbjct: 246 GYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRY-ICAHGHT 304
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKT---DE 432
P+ T+ ++ HG+ E+AF + +EM + KPN+ + L+ S K GK E
Sbjct: 305 PNIMTYGVLLDGLCKHGNLEEAFALFQEMQR-STVKPNLVIYTILIDSLCKCGKIKDGKE 363
Query: 433 CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
S+L+D+ L ++ TYT ++ LC+ A+ LF++M TP
Sbjct: 364 LFSRLIDE-----GLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTP 410
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 145/318 (45%), Gaps = 5/318 (1%)
Query: 172 AKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LK 230
+K+ G +E V E+ G+E++ ++++L++ C +V+ SV + LK
Sbjct: 66 SKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSVLSKILK 125
Query: 231 SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSK 290
+ P+ TF ++G C ++D+ +M G P V +Y+ II S + ++
Sbjct: 126 LGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANE 185
Query: 291 VYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIY 350
L +M+ GC PNVV Y+T++ G +EA + + M G P+ + L+
Sbjct: 186 ALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMN 245
Query: 351 TLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHC 410
+ R++EAV + E G+ PD TF T+I+ G A + + H
Sbjct: 246 GYCKIERIEEAVQLLD-ETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGH- 303
Query: 411 KPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWA 470
PN+ T+ LL K G +E + L +M + + ++ YT++I LC+ K +
Sbjct: 304 TPNIMTYGVLLDGLCKHGNLEEAFA-LFQEM-QRSTVKPNLVIYTILIDSLCKCGKIKDG 361
Query: 471 YLLFKEMIGHDITPRYQT 488
LF +I + P T
Sbjct: 362 KELFSRLIDEGLKPNVYT 379
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 141/312 (45%), Gaps = 36/312 (11%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G E S + +++ L +MDQ+ L ++M +G + T ++ S +G+ +A
Sbjct: 127 GLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEA 186
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHG 246
+ ++ G N + L+D C G+++ ARSVF L + PN +T+ ++G
Sbjct: 187 LGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNG 246
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
+CKI R++EA + E G P +++++TII CR +L + A G PN
Sbjct: 247 YCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPN 306
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA----- 361
++TY ++ L K G+ EEA + ++M+ KP+ + LI +L + ++++
Sbjct: 307 IMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFS 366
Query: 362 ----------VYVYQV-------------------EMPENGVAPDTSTFNTMITMFSHHG 392
VY Y +M E+G PD +N +I F H
Sbjct: 367 RLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHK 426
Query: 393 HHEKAFHVLEEM 404
A ++EEM
Sbjct: 427 DPSMARQLVEEM 438
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 134/264 (50%), Gaps = 4/264 (1%)
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
I + H+ +I I+ +C ++RVD + ++ G P +++++T++ C + +V
Sbjct: 93 IEQDIHSLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVM 152
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
L D+M +G PNV TY +++ L+KSG EA+ ++M+ VG P+ ++ LI
Sbjct: 153 MLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGY 212
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
++ EA V+ + M G P+ T+ +++ + E+A +L+E + + P
Sbjct: 213 CLRGQMDEARSVFDL-MVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLR-KGLVP 270
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
++ TF ++ + G+ +Q L + H + +I TY +++ GLC+ E A+
Sbjct: 271 DIVTFTTIISGLCRAGR--PLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFA 328
Query: 473 LFKEMIGHDITPRYQTCRLILDEV 496
LF+EM + P +++D +
Sbjct: 329 LFQEMQRSTVKPNLVIYTILIDSL 352
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 145/328 (44%), Gaps = 17/328 (5%)
Query: 62 PRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKS--ALG 119
P + +++ + + D+V L D + +QP+ Y N +I+ K+ ALG
Sbjct: 130 PSIVTFTTLLNGLCMEGKMDQVMM-LYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALG 188
Query: 120 IFRW---AGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVM 175
+ G P + Y ++D QMD+ R++ + M SKG + T +M
Sbjct: 189 FLKQMEKVGCVPNVVN----YSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLM 244
Query: 176 RRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCI-- 233
+ + E+AV+ DE GL + T ++ LC+ G+ A+ +F + C
Sbjct: 245 NGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYI--CAHG 302
Query: 234 -PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
PN T+ + + G CK ++EA QEM+ P ++ Y+ +I S C+
Sbjct: 303 HTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGK 362
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
EL + +G PNV TYT ++ L K G EA ++ KM+ G PD +N +I
Sbjct: 363 ELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGF 422
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTST 380
+ A + + EM G + D +T
Sbjct: 423 LQHKDPSMARQLVE-EMVNRGFSADAAT 449
>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
Length = 465
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 184/372 (49%), Gaps = 14/372 (3%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQW 184
G +S + +V+ K + LLE M+ + ++V+ N + + + + +W
Sbjct: 5 GCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLE---RW 61
Query: 185 EDAVRTFDELGTFGLEKNTE--TMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFN 241
+A ++ + G + T + LL CK GKVE +R + E+ S + P+A +
Sbjct: 62 HEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYT 121
Query: 242 IFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ 301
+ CK R+ EA ++EM GC P +I+++T+I CR+ N LL +M A
Sbjct: 122 KVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAAS 181
Query: 302 GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
G +VVTY T+M L K+G +EA ++ E+MK G PD ++ +Y L ++ +V +A
Sbjct: 182 GVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDA 241
Query: 362 VYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLL 421
V + +M ++ P+ T+NT++ G + A ++E+M + C NV + ++
Sbjct: 242 HQVLE-QMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300
Query: 422 KSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHD 481
K G+T E S + + + + D+ TY+ +++GLC+A K E A +EM
Sbjct: 301 DGLCKLGRTQEARSVM--EAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEG 358
Query: 482 ITPRYQT-CRLI 492
P T C L+
Sbjct: 359 CKPNAVTYCSLV 370
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 143/289 (49%), Gaps = 15/289 (5%)
Query: 205 TMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
T N L+ C+E +E+A S+ ++ S + + T+N + G CK R+ EA+ ++ M
Sbjct: 154 TFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERM 213
Query: 264 KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF 323
K GC P V++YS+ + C+ +++L++M+ PNVVTY T++ L KSG
Sbjct: 214 KASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKI 273
Query: 324 EEAIRITEKMKIVGSKPDSRFFNCLIYT-----LGRASRVQEAVYVYQVEMPENGVAPDT 378
+ A+ + E+M + D N + Y+ L + R QEA V + M G PD
Sbjct: 274 DTALEMMEQM----ASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEA-MARAGCRPDV 328
Query: 379 STFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL---LKSCFKTGKTDECLS 435
T+++++ G E+A + EM +E CKPN T+ L L SC + + + +
Sbjct: 329 VTYSSLVNGLCKAGKIEEAVEAVREM-AMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVE 387
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
++ HH ++TY +I GLC+A + + A F+ M P
Sbjct: 388 EMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDP 436
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 133/276 (48%), Gaps = 9/276 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++D L K ++ + LLE M + G + + + +G+ DA + +++
Sbjct: 190 YNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMR 249
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC--IPPNAHTFNIFIHGWCKINRV 253
+ N T N +LD LCK GK++ A + ++ S N ++ + G CK+ R
Sbjct: 250 DSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRT 309
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
EA+ ++ M GC P V++YS+++ C+ + E + EM +GC PN VTY ++
Sbjct: 310 QEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSL 369
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSK-----PDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
+ L G EA R+ E+M G P +N LI L +A R+ +A+ +Q
Sbjct: 370 VHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQ-R 428
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
M G PD +++T++ + G +A +L E+
Sbjct: 429 MRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEV 464
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 143/274 (52%), Gaps = 6/274 (2%)
Query: 234 PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
PPN+ TFN ++G+ K R + + ++ M P V+SY+ +++ C+ + + E
Sbjct: 7 PPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEE 66
Query: 294 LLDEMQAQG--CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYT 351
L+ +M ++G P++VTY+T++S K+G EE+ + +++ G +PD+ + ++ +
Sbjct: 67 LVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVAS 126
Query: 352 LGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCK 411
L +++R+ EA+ + + M G P TFNT+I+ + E A +L++M K
Sbjct: 127 LCKSARLGEALELLEE-MIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA-SGVK 184
Query: 412 PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAY 471
+V T++ L+ K G+ E QLL+ M + D+ Y+ ++GLC++ K A+
Sbjct: 185 ADVVTYNTLMDGLCKAGRLQE-AEQLLERM-KASGCAPDVVAYSSFVYGLCKSGKVLDAH 242
Query: 472 LLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
+ ++M P T ILD + + D A
Sbjct: 243 QVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTA 276
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 103/207 (49%), Gaps = 10/207 (4%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTI--AKVMRRFSGAGQWEDAVRTFDEL 194
Y ++D L K ++D ++E+M+ LN + + V+ G+ ++A + +
Sbjct: 260 YNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAM 319
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINR 252
G + T + L++ LCK GK+E A E+ + C PNA T+ +HG C R
Sbjct: 320 ARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGC-KPNAVTYCSLVHGLCSCGR 378
Query: 253 VDEAQWTIQEMKGHG-----CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
+ EA+ ++EM G C P V +Y+ +I C+ + M++QGC P+
Sbjct: 379 LAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDG 438
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMK 334
V+Y+T++ LA+SG +A I +++
Sbjct: 439 VSYSTIVEGLARSGRALQAEMILSEVR 465
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 105/225 (46%), Gaps = 9/225 (4%)
Query: 82 EVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMV 141
+V + ++ H + + +++ L K D +AL + S G + Y +V
Sbjct: 243 QVLEQMRDSHHDPNVVTYNTILDGLCKSGKID--TALEMMEQMASSDGCGLNVVGYSTVV 300
Query: 142 DILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLE 200
D L K+ + + R+++E M++ G + T + ++ AG+ E+AV E+ G +
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCK 360
Query: 201 KNTETMNLLLDTLCKEGKVELARSVFLELKSC------IPPNAHTFNIFIHGWCKINRVD 254
N T L+ LC G++ A + E+ S PP+ T+N I G CK R+D
Sbjct: 361 PNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRID 420
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+A Q M+ GC P +SYSTI++ R + +L E++
Sbjct: 421 DALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEVR 465
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 93/222 (41%), Gaps = 37/222 (16%)
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
M GCPPN VT+ +++ +K G + R+ E M +P+ +N L+ L + R
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60
Query: 358 VQEAVYVYQVEMPENGVA-PDTSTFNTMITMFSHHGHHEKAFHVLEEM-------NKLEH 409
EA + + + G + PD T++T+++ + G E++ +L+E+ + L +
Sbjct: 61 WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120
Query: 410 ---------------------------CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMV 442
C P + TF+ L+ C + K E LL M
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCRE-KNLEMADSLLQKMA 179
Query: 443 NKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
+ D+ TY ++ GLC+A + + A L + M P
Sbjct: 180 -ASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAP 220
>gi|15221377|ref|NP_177613.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207514|sp|Q9SSF9.1|PP123_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74750
gi|5882748|gb|AAD55301.1|AC008263_32 Contains 2 PF|01535 DUF domains [Arabidopsis thaliana]
gi|332197508|gb|AEE35629.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 855
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 106/435 (24%), Positives = 201/435 (46%), Gaps = 35/435 (8%)
Query: 10 KQARIPLNPLTSRIRFHSSSENCSHIVSSS-------PIESYCSDGARLDHHQVLCVDSP 62
K+ +P P T R+ +S C + V SS +E + + +P
Sbjct: 230 KRKIMPQRPYTDSTRY--ASGGCDYSVHSSDDRTIISSVEGFGKPSREMMKVTPRTAPTP 287
Query: 63 R--------LPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDW 114
R + ++ I+ + G + +E + + Y N+++ + D++
Sbjct: 288 RQHCNPGYVVENVSSILRRFKWGHAAEEALHNF-------GFRMDAYQANQVLKQM-DNY 339
Query: 115 KSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNT 170
+ALG F W PG++H Y MV LG+ +Q ++ LL+EM K + VT N
Sbjct: 340 ANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYN- 398
Query: 171 IAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK 230
+++ + A ++A+ F+++ G E + T L+D K G +++A ++ ++
Sbjct: 399 --RLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQ 456
Query: 231 -SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFS 289
+ + P+ T+++ I+ K + A EM G GC P +++++ +I + + N+
Sbjct: 457 EAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYE 516
Query: 290 KVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
+L +MQ G P+ VTY+ VM L G EEA + +M+ PD + L+
Sbjct: 517 TALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLV 576
Query: 350 YTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH 409
G+A V +A YQ M + G+ P+ T N++++ F +A+++L+ M L
Sbjct: 577 DLWGKAGNVDKAWQWYQA-MLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLAL-G 634
Query: 410 CKPNVQTFHPLLKSC 424
P++QT+ LL C
Sbjct: 635 LHPSLQTYTLLLSCC 649
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/400 (22%), Positives = 173/400 (43%), Gaps = 21/400 (5%)
Query: 124 AGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK--------GHIVTLNTIAKVM 175
+G C HSS+ ++ + G + +M + + G++V ++ ++
Sbjct: 247 SGGCDYSVHSSDDRTIISSVEGFGKPSREMMKVTPRTAPTPRQHCNPGYVV--ENVSSIL 304
Query: 176 RRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPP 235
RRF +W A + L FG + N +L + L +L+ +
Sbjct: 305 RRF----KWGHAAE--EALHNFGFRMDAYQANQVLKQMDNYANA-LGFFYWLKRQPGFKH 357
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
+ HT+ + + + E + EM GC P ++Y+ +I SY R + +
Sbjct: 358 DGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVF 417
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
++MQ GC P+ VTY T++ AK+G + A+ + ++M+ G PD+ ++ +I LG+A
Sbjct: 418 NQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKA 477
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQ 415
+ A ++ EM G P+ TFN MI + + ++E A + +M +P+
Sbjct: 478 GHLPAAHRLF-CEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGF-QPDKV 535
Query: 416 TFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFK 475
T+ +++ G +E + +M K+ + D Y L++ +A + A+ ++
Sbjct: 536 TYSIVMEVLGHCGFLEEA-EGVFAEMQRKNWVP-DEPVYGLLVDLWGKAGNVDKAWQWYQ 593
Query: 476 EMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
M+ + P TC +L + H A + M L
Sbjct: 594 AMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLAL 633
>gi|255660896|gb|ACU25617.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 484
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 192/388 (49%), Gaps = 14/388 (3%)
Query: 100 HYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEE 159
H LV ++H K + AL FRW +EH+ E + +++ILG+ +++ R +L +
Sbjct: 12 HELVYNVLHSSKTS-EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLD 70
Query: 160 M-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
M KG + ++ + G +++V+ F ++ G+E+ ++ N L + + G+
Sbjct: 71 MPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGR 130
Query: 219 VELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
+A+ F + L I P HTFN+ I G+ +V+ A ++MK P V++Y+T
Sbjct: 131 YMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNT 190
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+I Y R + + EM+ + P VVTYTT++ ++A+R+ E+MK G
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFG 250
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP-DTSTFNTMITMFSHHGHHEK 396
KP++ ++ L+ L A ++ EA + + EM + +AP D F +I+ G+ +
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMSEARVILK-EMMDKYLAPTDNXIFMRLISSHCKSGNLDA 309
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK-------HHLSL 449
A VL+ M +L + L+++ K G+ D+ + +LLD ++ K L L
Sbjct: 310 AADVLKAMIRLS-VPTEAGHYGVLIENFCKXGQYDKAV-KLLDKLIEKDIILRPQSTLHL 367
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEM 477
+ + Y +I LC + A L +++
Sbjct: 368 EPSAYNPMIEYLCNNGQAXKAETLVRQL 395
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 133/311 (42%), Gaps = 4/311 (1%)
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQ 257
E N ET +++ L + K+ AR + L++ K + + + + I + K V E+
Sbjct: 41 FEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESV 100
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
Q+M+ G + SY+ + + R+ + ++M ++G P T+ ++
Sbjct: 101 KMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGF 160
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
SG E A R E MK PD +N +I R +++EA Y VEM + P
Sbjct: 161 FLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEK-YFVEMKGRNIEPT 219
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
T+ T+I + + A ++EEM KPN T+ LL K E +
Sbjct: 220 VVTYTTLIKGYVSVDQVDDALRLVEEMKGF-GIKPNAITYSTLLPGLCNAEKMSEA-RVI 277
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVK 497
L +M++K+ D + +I C++ + A + K MI + ++++
Sbjct: 278 LKEMMDKYLAPTDNXIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFC 337
Query: 498 QKHMYDAAEKI 508
+ YD A K+
Sbjct: 338 KXGQYDKAVKL 348
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 126/267 (47%), Gaps = 6/267 (2%)
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
+ ++++ A+ + +M G + +I SY ++ + ++ +M+ G +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIK 116
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
+Y + + + G + A R KM G +P FN +I+ + +V+ A ++ +
Sbjct: 117 SYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFE-D 175
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M ++PD T+NTMI + E+A EM K + +P V T+ L+K
Sbjct: 176 MKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEM-KGRNIEPTVVTYTTLIKGYVSVD 234
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ D+ L +L+++M + + TY+ ++ GLC A K A ++ KEM+ + P
Sbjct: 235 QVDDAL-RLVEEM-KGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNX 292
Query: 489 C--RLILDEVKQKHMYDAAEKIEAVMK 513
RLI K ++ AA+ ++A+++
Sbjct: 293 IFMRLISSHCKSGNLDAAADVLKAMIR 319
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 5/205 (2%)
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N T+ ++ L ++ A I M G + D + +I + G+ VQE+V ++
Sbjct: 44 NRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMF 103
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
Q +M E GV ++N + + G + A +M E +P TF+ ++ F
Sbjct: 104 Q-KMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLS-EGIEPTRHTFNVMIWGFF 161
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
+GK E ++ +DM ++ +S D+ TY +I+G R K E A F EM G +I P
Sbjct: 162 LSGKV-ETANRFFEDMKSRE-ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPT 219
Query: 486 YQT-CRLILDEVKQKHMYDAAEKIE 509
T LI V + DA +E
Sbjct: 220 VVTYTTLIKGYVSVDQVDDALRLVE 244
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 150/290 (51%), Gaps = 16/290 (5%)
Query: 189 RTFDELGTFGLEKNTE---------TMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAH 238
R DE F L+K E T ++L+ LCKEG++++A +F E++ + PN
Sbjct: 272 RNLDE--GFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGI 329
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
TF I G C+ R+D A T +M G P ++ Y+T++ C+ + +K +L+DEM
Sbjct: 330 TFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEM 389
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRV 358
+ G P+ +TYTT++ K GD E A+ I + M G D+ F LI R RV
Sbjct: 390 RMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRV 449
Query: 359 QEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFH 418
++A + EM E G+ PD +T+ +I + G+ + F +L+EM H KP V T++
Sbjct: 450 RDAERTLR-EMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGH-KPGVITYN 507
Query: 419 PLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
L+ K G+ + LL+ M+N DI TY +++ G C+ K E
Sbjct: 508 VLMNGLCKQGQMKNA-NMLLEAMLNLGVTPDDI-TYNILLEGHCKNGKAE 555
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 159/324 (49%), Gaps = 6/324 (1%)
Query: 191 FDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCK 249
+ E+ +G + N+L++ CKEG + A+ +F E+ K + P +FN I+G CK
Sbjct: 211 YSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCK 270
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
+DE + M+ + +P V +YS +I C++ +L DEMQ +G PN +T
Sbjct: 271 SRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGIT 330
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM 369
+T ++ +S + A+ +M +G KPD +N L+ L + V +A + EM
Sbjct: 331 FTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVD-EM 389
Query: 370 PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
G+ PD T+ T+I + G E A + + MN+ NV F L+ + G+
Sbjct: 390 RMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNV-AFTALISGFCRDGR 448
Query: 430 TDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTC 489
+ + L +MV + + D TYT+VI G C+ + + L KEM + P T
Sbjct: 449 VRDA-ERTLREMV-EAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITY 506
Query: 490 RLILDEV-KQKHMYDAAEKIEAVM 512
++++ + KQ M +A +EA++
Sbjct: 507 NVLMNGLCKQGQMKNANMLLEAML 530
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 155/322 (48%), Gaps = 5/322 (1%)
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SC 232
++ +F G DA F+E+ GL T + N L++ LCK ++ + ++ +
Sbjct: 229 LINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENR 288
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
I P+ T+++ IHG CK R+D A+ EM+ G P I+++ +I CR
Sbjct: 289 IYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAM 348
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
+M G P++V Y T+++ L K GD +A ++ ++M++VG KPD + LI
Sbjct: 349 NTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGY 408
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
+ ++ A+ + + M E GV D F +I+ F G A L EM + KP
Sbjct: 409 CKEGDLESAMEIRK-GMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVE-AGMKP 466
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
+ T+ ++ K G L + +N H + TY ++++GLC+ + + A +
Sbjct: 467 DDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPG--VITYNVLMNGLCKQGQMKNANM 524
Query: 473 LFKEMIGHDITPRYQTCRLILD 494
L + M+ +TP T ++L+
Sbjct: 525 LLEAMLNLGVTPDDITYNILLE 546
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 97/204 (47%), Gaps = 3/204 (1%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
+Y +++ L KV +++ R L++EM G T ++ + G E A+ +
Sbjct: 365 MYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGM 424
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRV 253
G+ + L+ C++G+V A E+ ++ + P+ T+ + I G+CK V
Sbjct: 425 NEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNV 484
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
++EM+ +G P VI+Y+ ++ C+Q LL+ M G P+ +TY +
Sbjct: 485 KMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNIL 544
Query: 314 MSYLAKSGDFEEAIRI-TEKMKIV 336
+ K+G E+ +++ EK IV
Sbjct: 545 LEGHCKNGKAEDLLKLRNEKGLIV 568
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 101/230 (43%), Gaps = 16/230 (6%)
Query: 291 VYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIY 350
++ E+ G PP V Y +++ K G +A I +++ G +P + FN LI
Sbjct: 207 IWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLIN 266
Query: 351 TLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHC 410
L ++ + E + + M EN + PD T++ +I G + A + +EM +
Sbjct: 267 GLCKSRNLDEGFRLKKT-MEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQ-RGL 324
Query: 411 KPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSL------DITTYTLVIHGLCRA 464
+PN TF L+ +C S+ +D +N +H L D+ Y +++GLC+
Sbjct: 325 RPNGITFTALIDG--------QCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKV 376
Query: 465 NKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
A L EM + P T ++D ++ ++A +I M +
Sbjct: 377 GDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNE 426
>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 739
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 113/441 (25%), Positives = 199/441 (45%), Gaps = 25/441 (5%)
Query: 65 PDIDVIISKVH--VGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKD--DWKSALGI 120
PD V + VH G+ ++L D + +P+ + N LI + + D + A+ +
Sbjct: 175 PDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDV 234
Query: 121 FRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFS 179
F G + Y ++ K R++D+ L M G + + T +++
Sbjct: 235 FERM-DVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQC 293
Query: 180 GAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAH 238
GQ + A R + GL N T ++L+D LCK +V A+ + L + I N
Sbjct: 294 SDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEI 353
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
+ I G CK R A +Q + G P +YS++I CRQ S+ +LD+M
Sbjct: 354 VYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDM 413
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRV 358
+G P+ VTYT ++ L + + + +I +KM G KPD + + + R+
Sbjct: 414 MEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRM 473
Query: 359 QEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFH 418
++A ++ + M ++GV P+ T+N +I +++ G +AF + M CKPN +++
Sbjct: 474 EDAEHM-MLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVA-NGCKPNEESYT 531
Query: 419 PLLKSCFKTGKTDEC---------------LSQLLDDMVNKHHLSLDITTYTLVIHGLCR 463
LL+ K ++ L LL++MV K L +I Y + LCR
Sbjct: 532 VLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMV-KLQLPSEIDIYNCFLTSLCR 590
Query: 464 ANKCEWAYLLFKEMIGHDITP 484
++ + A +L EM ++TP
Sbjct: 591 VDRLDEAKILLIEMQSANLTP 611
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 149/330 (45%), Gaps = 7/330 (2%)
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHT 239
AG A R F + G + T LL LC G V A SVF +++ P+ H
Sbjct: 120 AGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHV 179
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+ +HG C R EA+ + + G P V+ Y+ +I YC + ++ + M
Sbjct: 180 YATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMD 239
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
GC PNV TYT ++S KS + A+ + +M G P+ + LI G+ S Q
Sbjct: 240 VNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQ--GQCSDGQ 297
Query: 360 -EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFH 418
+ Y M +G+ P+ T + +I H +A +L + + + K N +
Sbjct: 298 LDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQ-KGIKVNEIVYT 356
Query: 419 PLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
L+ K G+ +L+ +V++ + D TY+ +I GLCR + A L+ +M+
Sbjct: 357 SLIDGLCKAGRFAAA-DRLMQTLVSQGFVP-DAHTYSSLIDGLCRQKELSEAMLVLDDMM 414
Query: 479 GHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+ P T +I+DE+ ++ D ++KI
Sbjct: 415 EKGVQPSPVTYTIIIDELVREVGADGSKKI 444
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 153/365 (41%), Gaps = 42/365 (11%)
Query: 172 AKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LEL 229
A ++ GAG+ +A + G E N N L+D C G +ELA VF +++
Sbjct: 181 ATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDV 240
Query: 230 KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFS 289
C PN T+ I G+CK ++D A M G P V++Y+ +IQ C
Sbjct: 241 NGC-SPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLD 299
Query: 290 KVYELLDEMQAQGCPPNV-----------------------------------VTYTTVM 314
Y LL M+ G PN + YT+++
Sbjct: 300 CAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLI 359
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
L K+G F A R+ + + G PD+ ++ LI L R + EA+ V +M E GV
Sbjct: 360 DGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLD-DMMEKGV 418
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
P T+ +I + + +L++M KP+V T+ ++S G+ ++
Sbjct: 419 QPSPVTYTIIIDELVREVGADGSKKILDKMIA-AGIKPDVFTYTIFVRSYCHEGRMEDAE 477
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
+L MV+ H + ++ TY +I G A+ FK M+ + P ++ ++L
Sbjct: 478 HMMLH-MVD-HGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLR 535
Query: 495 EVKQK 499
+ +K
Sbjct: 536 LLIKK 540
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 139/324 (42%), Gaps = 5/324 (1%)
Query: 162 KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVEL 221
+G + T T ++ GAG +A+ F + G + ++ LC G+
Sbjct: 136 RGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTRE 195
Query: 222 ARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQ 280
A ++ + + PN +N I G+C + ++ A + M +GC P V +Y+ +I
Sbjct: 196 AETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELIS 255
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
+C+ + L M G PNVVTYT ++ G + A R+ + M+ G P
Sbjct: 256 GFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVP 315
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
+ + LI L + RV EA + + + G+ + + ++I G A +
Sbjct: 316 NEWTCSVLIDALCKHERVGEAQLLLG-SLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRL 374
Query: 401 LEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHG 460
++ + + P+ T+ L+ + + E + +LDDM+ K + TYT++I
Sbjct: 375 MQTLVS-QGFVPDAHTYSSLIDGLCRQKELSEAM-LVLDDMMEK-GVQPSPVTYTIIIDE 431
Query: 461 LCRANKCEWAYLLFKEMIGHDITP 484
L R + + + +MI I P
Sbjct: 432 LVREVGADGSKKILDKMIAAGIKP 455
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 147/351 (41%), Gaps = 41/351 (11%)
Query: 201 KNTETMNLLLDTLCKEGKVELA-RSVFLELKSCIPPNAHTFNIFI--------------- 244
+N T L++ C G + + R + L++ P++H + F+
Sbjct: 70 RNLRTYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRL 129
Query: 245 --------------------HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCR 284
HG C V EA M+ GC P Y+T++ C
Sbjct: 130 FVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCG 189
Query: 285 QYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRF 344
+ LL + A+G PNVV Y ++ GD E A+ + E+M + G P+ R
Sbjct: 190 AGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRT 249
Query: 345 FNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
+ LI ++ ++ A+ ++ M + G+ P+ T+ +I G + A+ +L+ M
Sbjct: 250 YTELISGFCKSRKLDRAMMLFS-RMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSM 308
Query: 405 NKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRA 464
PN T L+ + K + E +QLL + + + ++ YT +I GLC+A
Sbjct: 309 EN-SGLVPNEWTCSVLIDALCKHERVGE--AQLLLGSLIQKGIKVNEIVYTSLIDGLCKA 365
Query: 465 NKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEAVMKK 514
+ A L + ++ P T ++D + +QK + +A ++ +M+K
Sbjct: 366 GRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEK 416
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 84/203 (41%), Gaps = 17/203 (8%)
Query: 148 RQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN 207
R D +L + G L T ++ ++ G A TF + G + N E+
Sbjct: 472 RMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYT 531
Query: 208 LLLDTLCKEGKV-----------ELARSVFLE------LKSCIPPNAHTFNIFIHGWCKI 250
+LL L K+ ++A +L +K +P +N F+ C++
Sbjct: 532 VLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRV 591
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
+R+DEA+ + EM+ P Y++II CR ++ +D M G P + +Y
Sbjct: 592 DRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESY 651
Query: 311 TTVMSYLAKSGDFEEAIRITEKM 333
++S L + G + A ++ M
Sbjct: 652 RHIISSLCEEGSIQTAKQVFGDM 674
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/293 (19%), Positives = 112/293 (38%), Gaps = 59/293 (20%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQW 184
G+ + Y ++D L + +++ + +L++M + + VT I + R GA
Sbjct: 382 GFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGA--- 438
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIF 243
+ + + D++ G++ + T + + + C EG++E A + L + + PN T+N
Sbjct: 439 DGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNAL 498
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQ----------------------- 280
I G+ + +A T + M +GC P SY+ +++
Sbjct: 499 ICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAE 558
Query: 281 ----------------------------SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
S CR + LL EMQ+ P+ YT+
Sbjct: 559 MKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTS 618
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
+++ + EA+ + M G P + +I +L +Q A V+
Sbjct: 619 IIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVF 671
Score = 45.1 bits (105), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 33/171 (19%), Positives = 73/171 (42%), Gaps = 1/171 (0%)
Query: 191 FDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCK 249
+E+ L + N L +LC+ +++ A+ + +E++S + P+ + I C+
Sbjct: 566 LEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCR 625
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
+ + EA + M G P + SY II S C + + ++ +M ++ +
Sbjct: 626 LKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIA 685
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
+ ++ L + G E + M+ +P + L + A+ +QE
Sbjct: 686 WRILIDGLLQKGYVAECSSLLSVMEEKNYRPSDALYARLTGKITDANDIQE 736
>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 111/442 (25%), Positives = 190/442 (42%), Gaps = 85/442 (19%)
Query: 97 QPSHYLVNKLIHRF-----KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMD 151
QP + N LI+ F DD L R P + Y +M+ L ++D
Sbjct: 151 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSP----DTVTYNIMIGSLCSRGKLD 206
Query: 152 -QMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLL 210
++ L + +S T+ T ++ G ++A++ DE+ + GL+ + T N ++
Sbjct: 207 LALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTII 266
Query: 211 DTLCKEGKVELARSVF--LELKSCIP---------------------------------- 234
+CKEG V+ A + LELK C P
Sbjct: 267 RGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCD 326
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYEL 294
PN T++I I C+ +++EA ++ MK G P SY +I ++CR+ E
Sbjct: 327 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 386
Query: 295 LDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGR 354
L+ M + GC P++V Y TV++ L K+G ++A+ I K+ VG P+S +N + L
Sbjct: 387 LETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWS 446
Query: 355 ASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNV 414
+ A+++ +EM NG+ PD T+N+MI+ G +KAF +L +M E
Sbjct: 447 SGDKIRALHMI-LEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCE------ 499
Query: 415 QTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLF 474
FHP + TY +V+ G C+A++ E A +
Sbjct: 500 --FHP------------------------------SVVTYNIVLLGFCKAHRIEDAIDVL 527
Query: 475 KEMIGHDITPRYQTCRLILDEV 496
M+G+ P T ++++ +
Sbjct: 528 DSMVGNGCRPNETTYTVLIEGI 549
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 96/394 (24%), Positives = 183/394 (46%), Gaps = 44/394 (11%)
Query: 156 LLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK 215
+LE+ + + N + + F + +DA R D + + +T T N+++ +LC
Sbjct: 145 ILEKFGQPDVFAYNAL---INGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCS 201
Query: 216 EGKVELARSVFLELKS--CIP----------------------------------PNAHT 239
GK++LA V +L S C P P+ T
Sbjct: 202 RGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFT 261
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+N I G CK VD A I+ ++ GC P VISY+ ++++ Q + + +L+ +M
Sbjct: 262 YNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMF 321
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
++ C PNVVTY+ +++ L + G EEA+ + + MK G PD+ ++ LI R R+
Sbjct: 322 SEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLD 381
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
A+ + M +G PD +NT++ +G ++A + ++ ++ C PN +++
Sbjct: 382 VAIEFLET-MISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEV-GCSPNSSSYNT 439
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
+ + + +G L +L+ + N + D TY +I LCR + A+ L +M
Sbjct: 440 MFSALWSSGDKIRALHMILEMVSNG--IDPDEITYNSMISCLCREGMVDKAFELLVDMRS 497
Query: 480 HDITPRYQTCRLILDEVKQKH-MYDAAEKIEAVM 512
+ P T ++L + H + DA + +++++
Sbjct: 498 CEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMV 531
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 113/231 (48%), Gaps = 8/231 (3%)
Query: 137 YEMMVDIL---GKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDE 193
Y +++ L GK+ + + L++E KG + ++ F G+ + A+ +
Sbjct: 332 YSILITTLCRDGKIEEAMNLLKLMKE--KGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 389
Query: 194 LGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFN-IFIHGWCKIN 251
+ + G + N +L TLCK GK + A +F +L PN+ ++N +F W +
Sbjct: 390 MISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGD 449
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
++ A I EM +G P I+Y+++I CR+ K +ELL +M++ P+VVTY
Sbjct: 450 KI-RALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYN 508
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
V+ K+ E+AI + + M G +P+ + LI +G A EA+
Sbjct: 509 IVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAM 559
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 92/199 (46%), Gaps = 2/199 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y+ ++ + ++D LE M S G + + V+ G+ + A+ F +LG
Sbjct: 367 YDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLG 426
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVD 254
G N+ + N + L G A + LE+ S I P+ T+N I C+ VD
Sbjct: 427 EVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVD 486
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
+A + +M+ HP V++Y+ ++ +C+ + ++LD M GC PN TYT ++
Sbjct: 487 KAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLI 546
Query: 315 SYLAKSGDFEEAIRITEKM 333
+ +G EA+ + +
Sbjct: 547 EGIGFAGYRAEAMELANDL 565
>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 165/337 (48%), Gaps = 5/337 (1%)
Query: 178 FSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPN 236
FS + + A ++ G E + T + L++ LC E K A F E+ S PN
Sbjct: 129 FSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPN 188
Query: 237 AHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLD 296
HT+N I G+CKI + A +++M G P ++ Y+TII C+ S+ ++
Sbjct: 189 LHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFS 248
Query: 297 EMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRAS 356
E++ +G P+V TY+ +M L S EEA + +M + PD FN L+ L +
Sbjct: 249 EIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEG 308
Query: 357 RVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQT 416
+ EA + ++ M E GV P+ +T+N+++ + +A V + M + C PNV +
Sbjct: 309 MLSEAQGIIKI-MIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMIT-KGCMPNVVS 366
Query: 417 FHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKE 476
++ L+ K + DE +L D+M + L + Y +I GLC+A + A LFK+
Sbjct: 367 YNILINGYCKAQRIDEA-RELFDEM-SFRGLIPNTFNYNTLISGLCQAGRHCEARELFKD 424
Query: 477 MIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
M +P TC ++LD + + D A ++ M+
Sbjct: 425 MQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQ 461
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 163/334 (48%), Gaps = 8/334 (2%)
Query: 65 PDIDVIISKVHVGSSEDEVFQSLK--QDHVCNAIQPSHYLVNKLIHRFKDDWKS--ALGI 120
PD S ++ ED+ ++++ + V + QP+ + N +I F K+ A+G+
Sbjct: 152 PDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGL 211
Query: 121 FRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFS 179
+ G IY ++D L K R + + + E+ KG + T + +M
Sbjct: 212 LKKMDKAGG-RPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLC 270
Query: 180 GAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAH 238
+ Q E+A F+E+ + + + T N+L+D LCKEG + A+ + + ++ + PN
Sbjct: 271 NSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYA 330
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
T+N ++G+C N+V EA+ M GC P V+SY+ +I YC+ + EL DEM
Sbjct: 331 TYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEM 390
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRV 358
+G PN Y T++S L ++G EA + + M+ G PD L+ +L + +
Sbjct: 391 SFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYL 450
Query: 359 QEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
A+ +++ M ++ + P+ T++ +I G
Sbjct: 451 DNALRLFRA-MQDSCLKPNLVTYDILIRAMYKSG 483
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 162/334 (48%), Gaps = 15/334 (4%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS 161
L+N L F+D + A+ F + GY+ + Y ++ K+ + LL++M
Sbjct: 160 LINGLC--FEDKFARAMEFFDEMVA-SGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMD 216
Query: 162 KG----HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEG 217
K IV NTI + + +A+ F E+ G+ + T ++L+ LC
Sbjct: 217 KAGGRPDIVIYNTIIDGLCK---DRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSD 273
Query: 218 KVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYS 276
+ E A ++F E+ S I P+ TFNI + CK + EAQ I+ M G P +Y+
Sbjct: 274 QKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYN 333
Query: 277 TIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIV 336
+++ YC Q + + D M +GC PNVV+Y +++ K+ +EA + ++M
Sbjct: 334 SLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFR 393
Query: 337 GSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEK 396
G P++ +N LI L +A R EA +++ +M G +PD T ++ G+ +
Sbjct: 394 GLIPNTFNYNTLISGLCQAGRHCEARELFK-DMQAQGCSPDLVTCTILLDSLCKLGYLDN 452
Query: 397 AFHVLEEMNKLEHC-KPNVQTFHPLLKSCFKTGK 429
A + M + C KPN+ T+ L+++ +K+GK
Sbjct: 453 ALRLFRAMQ--DSCLKPNLVTYDILIRAMYKSGK 484
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 132/269 (49%), Gaps = 4/269 (1%)
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
FNI I+ + ++ RVD A + ++ G P +++S++I C + F++ E DEM
Sbjct: 122 FNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMV 181
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
A G PN+ TY T++ K G A+ + +KM G +PD +N +I L + V
Sbjct: 182 ASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVS 241
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
EA+ ++ E+ GV PD T++ ++ + E+A + EM L + P+V TF+
Sbjct: 242 EALDIFS-EIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSL-NIMPDVVTFNI 299
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
L+ K G E +Q + ++ + + + TY +++G C NK A ++F MI
Sbjct: 300 LVDKLCKEGMLSE--AQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMIT 357
Query: 480 HDITPRYQTCRLILDEVKQKHMYDAAEKI 508
P + ++++ + D A ++
Sbjct: 358 KGCMPNVVSYNILINGYCKAQRIDEAREL 386
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 131/267 (49%), Gaps = 8/267 (2%)
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
C + +++A ++ M PC++ + ++ + R ++ V L ++ +V
Sbjct: 60 CSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDV 119
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
+ +++ ++ + A + K+ +G +PD+ F+ LI L + A+ +
Sbjct: 120 FHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFD- 178
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKT 427
EM +G P+ T+NT+I F G A +L++M+K +P++ ++ ++ K
Sbjct: 179 EMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGG-RPDIVIYNTIIDGLCK- 236
Query: 428 GKTDECLSQLLDDM--VNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
D +S+ LD + + D+ TY++++HGLC +++ E A LF EM+ +I P
Sbjct: 237 ---DRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPD 293
Query: 486 YQTCRLILDEVKQKHMYDAAEKIEAVM 512
T +++D++ ++ M A+ I +M
Sbjct: 294 VVTFNILVDKLCKEGMLSEAQGIIKIM 320
>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1245
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 133/525 (25%), Positives = 225/525 (42%), Gaps = 55/525 (10%)
Query: 4 HLQKYLKQARIPLNPLTSRIRFHSSSENCSHIVSSSPIESYCSDGARLDHHQVLCVDSPR 63
+L++ + Q + + L F+ S C+ I+ S I C D + + + +
Sbjct: 133 YLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGS--IVKSCEDVSVWSFLKEM-LKRKI 189
Query: 64 LPDIDVIISKVHVGSSEDEVFQS--LKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALG 119
PD+ ++V +E +S L Q + P+ N ++H + K +K+A+
Sbjct: 190 CPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIE 249
Query: 120 IFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI----VTLNTIAKVM 175
+ + G Y M++ L + + + LL +M K I VT NT+ +
Sbjct: 250 LLDHM-NLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTL---L 305
Query: 176 RRFSGAGQWEDAVRTFDELGTFGLEKNTETMN---------------------------- 207
FS G+ A + +E+ TFGL N T N
Sbjct: 306 NGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLI 365
Query: 208 -------LLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWT 259
+LLD LCK + +LAR ++ +K + + T+ I G CK +DEA
Sbjct: 366 GTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVM 425
Query: 260 IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK 319
+ EM G P +++YS +I +CR E++ + G PN + Y+T++ +
Sbjct: 426 LNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCR 485
Query: 320 SGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTS 379
G +E IRI E M + G+ PD FN L+ +L +A +V EA + M +G+ P+
Sbjct: 486 MGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRC-MTSDGILPNAV 544
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLD 439
+F+ +I + G KAF V +EM K+ H P T+ LLK K G + L
Sbjct: 545 SFDCLINGYGSSGEGLKAFSVFDEMTKVGH-HPTFFTYGSLLKGLCKGGHLIAA-EKFLK 602
Query: 440 DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
+ N ++D +I +C++ + A LF EM+ I P
Sbjct: 603 SLQNVPA-AVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILP 646
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 175/391 (44%), Gaps = 26/391 (6%)
Query: 115 KSALGIFRWAGSCPGYE--HSSEIYEMMVDILGKVRQMDQMRALLEEMS----KGHIVTL 168
K AL +W PG + H +++ + IL + R D R +L+E+S K V
Sbjct: 51 KLALKFLKWVVKQPGLDTDHIVQLFCITTHILVRARMYDPARHILKELSLMSGKSSFVFG 110
Query: 169 NTIAK-------------VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK 215
+A ++R + G +D++ F +G +G + T N +L ++ K
Sbjct: 111 ALMATYRLCNSNPSVFDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVK 170
Query: 216 EGKVELARSVFLE--LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI 273
+ +++ FL+ LK I P+ TFNI I+ C ++ + +Q+M+ G P ++
Sbjct: 171 SCE-DVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIV 229
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
+Y+T++ YC++ F ELLD M +G +V TY ++ L +S + + M
Sbjct: 230 TYNTVLHWYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDM 289
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
+ P+ +N L+ +V A + EM G++P+ TFN +I G+
Sbjct: 290 RKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLN-EMLTFGLSPNHVTFNALIDGHISEGN 348
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
++A + M V ++ LL K + D L++ + ++ + + T
Sbjct: 349 FKEALKMFHMMEAKGLIGTEV-SYGVLLDGLCKNAEFD--LARGFYMRMKRNGVCVGRIT 405
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
YT +I GLC+ + A ++ EM I P
Sbjct: 406 YTGMIDGLCKNGFLDEAVVMLNEMSKDGIDP 436
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 152/328 (46%), Gaps = 4/328 (1%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTF 240
G ++ +R ++ + G + T N+L+ +LCK GKV A + S I PNA +F
Sbjct: 487 GCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSF 546
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
+ I+G+ +A EM G HP +Y ++++ C+ + + L +Q
Sbjct: 547 DCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQN 606
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
+ V T+++ + KSG+ ++A+ + +M PDS + LI L R +
Sbjct: 607 VPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVI 666
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
A+ + + P+ + + G + F+ ++M+KL + +V T + +
Sbjct: 667 AILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTR-DVVTTNAM 725
Query: 421 LKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH 480
+ + GK ++ LL +M N++ ++TTY +++HG + +++L++ MI
Sbjct: 726 IDGYSRMGKIEKT-HDLLFEMGNQNQ-GPNLTTYNILLHGYSKRKHVSTSFMLYRSMILS 783
Query: 481 DITPRYQTCRLILDEVKQKHMYDAAEKI 508
I P TC I+ + + +M + KI
Sbjct: 784 GILPDKLTCYSIILGICESNMLEIGLKI 811
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 128/284 (45%), Gaps = 5/284 (1%)
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHT 239
AGQW+ ++ GL ++ T N ++D + GK+E + E+ + PN T
Sbjct: 697 AGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTT 756
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+NI +HG+ K V + + M G P ++ +II C ++L
Sbjct: 757 YNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILKAFI 816
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
+G + T+ ++S +G+ A + M +G D + ++ L R R Q
Sbjct: 817 CRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQ 876
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
E+ V EM + G++P++ + ++ G + AF V EEM + C PNV
Sbjct: 877 ESRMVLH-EMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAE-SA 934
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCR 463
++++ K GK DE S LL M+ K L I ++T ++H C+
Sbjct: 935 MVRALAKCGKADEA-SLLLRSML-KMKLVPTIASFTTLMHLFCK 976
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 142/321 (44%), Gaps = 9/321 (2%)
Query: 166 VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELA--R 223
V NT+ M + +G + AV F E+ + ++ T L+ LC++GK +A
Sbjct: 614 VMCNTLITAMCK---SGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILF 670
Query: 224 SVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYC 283
+ E + + PN + F+ G K + + Q+M G V++ + +I Y
Sbjct: 671 AKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYS 730
Query: 284 RQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSR 343
R K ++LL EM Q PN+ TY ++ +K + + M + G PD
Sbjct: 731 RMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKL 790
Query: 344 FFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEE 403
+I + ++ ++ + + + + GV D TFN +I+ +G AF ++
Sbjct: 791 TCYSIILGICESNMLEIGLKILKAFICR-GVEVDRHTFNMLISKCCANGEINWAFDMVNV 849
Query: 404 MNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCR 463
M L + T ++ + + E S+++ ++K +S + Y +++GLCR
Sbjct: 850 MTSL-GISLDKNTCDAIVSVLNRNHRFQE--SRMVLHEMSKQGISPESRKYIGLLNGLCR 906
Query: 464 ANKCEWAYLLFKEMIGHDITP 484
+ A+++ +EMI H I P
Sbjct: 907 VGDIKTAFVVKEEMIAHKICP 927
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 114/256 (44%), Gaps = 11/256 (4%)
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEA 256
G+E + T N+L+ C G++ A + + S I + +T + + + +R E+
Sbjct: 819 GVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQES 878
Query: 257 QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG-CPPNVVTYTTVMS 315
+ + EM G P Y ++ CR + + + +EM A CPPNV V +
Sbjct: 879 RMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRA 938
Query: 316 YLAKSGDFEEA---IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN 372
LAK G +EA +R KMK+V P F L++ + V EA+ + +V M
Sbjct: 939 -LAKCGKADEASLLLRSMLKMKLV---PTIASFTTLMHLFCKNGNVTEALEL-RVVMSNC 993
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
G+ D ++N +IT G AF + EEM K + NV T+ L+ G
Sbjct: 994 GLKLDLVSYNVLITGLCAKGDMAIAFELFEEM-KRDGFLANVTTYKALVGGILSQGTEFS 1052
Query: 433 CLSQLLDDMVNKHHLS 448
+L D++ + ++
Sbjct: 1053 GTDIILKDLLARGFIT 1068
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 95/216 (43%), Gaps = 6/216 (2%)
Query: 179 SGAGQWE-DAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPN 236
+G W D V LG L+KNT + ++ L + + + +R V E+ K I P
Sbjct: 837 NGEINWAFDMVNVMTSLG-ISLDKNT--CDAIVSVLNRNHRFQESRMVLHEMSKQGISPE 893
Query: 237 AHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLD 296
+ + ++G C++ + A +EM H P ++ S ++++ + + LL
Sbjct: 894 SRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLR 953
Query: 297 EMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRAS 356
M P + ++TT+M K+G+ EA+ + M G K D +N LI L
Sbjct: 954 SMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSYNVLITGLCAKG 1013
Query: 357 RVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
+ A +++ EM +G + +T+ ++ G
Sbjct: 1014 DMAIAFELFE-EMKRDGFLANVTTYKALVGGILSQG 1048
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 103/256 (40%), Gaps = 29/256 (11%)
Query: 82 EVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWA------GSCPGYEHSSE 135
E+ + + +C ++ + N LI + A G WA + G
Sbjct: 806 EIGLKILKAFICRGVEVDRHTFNMLISKC-----CANGEINWAFDMVNVMTSLGISLDKN 860
Query: 136 IYEMMVDILGKVRQMDQMRALLEEMSK--------GHIVTLNTIAKVMRRFSGAGQWEDA 187
+ +V +L + + + R +L EMSK +I LN + +V G + A
Sbjct: 861 TCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRV-------GDIKTA 913
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE--LKSCIPPNAHTFNIFIH 245
+E+ + + ++ L K GK + A S+ L LK + P +F +H
Sbjct: 914 FVVKEEMIAHKICPPNVAESAMVRALAKCGKADEA-SLLLRSMLKMKLVPTIASFTTLMH 972
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
+CK V EA M G ++SY+ +I C + + + +EL +EM+ G
Sbjct: 973 LFCKNGNVTEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLA 1032
Query: 306 NVVTYTTVMSYLAKSG 321
NV TY ++ + G
Sbjct: 1033 NVTTYKALVGGILSQG 1048
>gi|147825385|emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
Length = 821
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 112/439 (25%), Positives = 204/439 (46%), Gaps = 47/439 (10%)
Query: 113 DWKSALGIFRWAGSCPGYEHSSEI----YEMMVDILGKVRQMDQMRALLEEMS-KGHIVT 167
+WK A+ +F+WA Y + +I E+MV ILG+ Q LL+E+S + + +
Sbjct: 150 NWKRAVLLFKWA-ILNLYSRNEKIDNQLVELMVRILGRESQHSVALRLLDEISVEEYSLD 208
Query: 168 LNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK------------ 215
+ ++ +S G++E A+ F+++ GL T N++LD K
Sbjct: 209 VRAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLL 268
Query: 216 ------------------------EGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKI 250
EG ++ AR F LKS T+N + + K
Sbjct: 269 DEMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKA 328
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
EA ++EM+ + C P +++Y+ ++ +Y R + + +D M +G PN +TY
Sbjct: 329 GIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITY 388
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
TTV++ K+G ++A+ +MK G P+ +N ++ LG+ SR++E + + +M
Sbjct: 389 TTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDML-CDMR 447
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKT 430
NG AP++ T+NTM+ M + G H+ V EM +PN TF+ L+ + + G
Sbjct: 448 SNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGF-EPNRDTFNALIGAYGRCGSQ 506
Query: 431 DECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCR 490
+ + ++ ++M+ K + +TTY +++ L R E A + +M P +
Sbjct: 507 IDVV-KMYEEMI-KAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYS 564
Query: 491 LILDEVKQKHMYDAAEKIE 509
L+L+ + EKIE
Sbjct: 565 LMLNCYAKGGNGRGIEKIE 583
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 98/403 (24%), Positives = 182/403 (45%), Gaps = 7/403 (1%)
Query: 114 WKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIA 172
W LG+ S G E ++ G+ +D+ R + S+G++ T
Sbjct: 261 WNKILGLLDEMRS-NGLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYN 319
Query: 173 KVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEG-KVELARSVFLELKS 231
+++ F AG + +A+ E+ + T N L+ + G E A + ++
Sbjct: 320 SLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRK 379
Query: 232 CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKV 291
I PNA T+ I+ + K + D+A ++MK GC P V +Y+ I+ ++ ++
Sbjct: 380 GIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEM 439
Query: 292 YELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYT 351
++L +M++ GC PN VT+ T+++ G + R+ +MK G +P+ FN LI
Sbjct: 440 IDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGA 499
Query: 352 LGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCK 411
GR + V +Y+ EM + G P +T+N ++ + G E A V+ +M K + K
Sbjct: 500 YGRCGSQIDVVKMYE-EMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDM-KSKGFK 557
Query: 412 PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAY 471
PN +T + L+ +C+ G + ++ +++ N H I TLV+ R
Sbjct: 558 PN-ETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKR-RALMGME 615
Query: 472 LLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
F+E H P +L + MYD A ++ ++++
Sbjct: 616 RAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRE 658
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/369 (20%), Positives = 146/369 (39%), Gaps = 83/369 (22%)
Query: 104 NKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKV-RQMDQMRALLEEMSK 162
NK +H++ + +FR SC G+E + + + ++ G+ Q+D ++ E +
Sbjct: 467 NKGMHKYVNR------VFREMKSC-GFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKA 519
Query: 163 GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEG----- 217
G + T ++ + G WE A ++ + G + N + +L+L+ K G
Sbjct: 520 GFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGI 579
Query: 218 -KVE-------------LARSVFLE-----------------LKSCIPPNAHTFNIFIHG 246
K+E L R++ L K P+ FN +
Sbjct: 580 EKIEEEIYNGHIFPSWILLRTLVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSI 639
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
+ K D A ++ ++ G P +++Y++++ Y R K E+L +Q G P+
Sbjct: 640 FAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPD 699
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
+V+Y TV+ + G +EAIR +M I G +P C++
Sbjct: 700 LVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRP------CIV----------------- 736
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH-CKPNVQTFHPLLKSCF 425
T+NT + +S G + V+ M ++H C+PN T+ ++
Sbjct: 737 -------------TYNTFVAGYSGKGMFSEVEEVISYM--IQHDCRPNELTYKIVVDGYC 781
Query: 426 KTGKTDECL 434
K K E +
Sbjct: 782 KGKKYKEAM 790
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 110/263 (41%), Gaps = 40/263 (15%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS 161
L+N L R DW++A + S G++ + Y +M++ K + + EE+
Sbjct: 531 LLNALARR--GDWEAAESVILDMKS-KGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIY 587
Query: 162 KGHI----VTLNTI--AKVMRR-----------FSGAGQWEDAVRTFDELGTF------- 197
GHI + L T+ A RR F G D V L F
Sbjct: 588 NGHIFPSWILLRTLVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYD 647
Query: 198 ------------GLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFI 244
GL+ + T N L+D + G+ + + KS P+ ++N I
Sbjct: 648 RAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVI 707
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
G+C+ + EA T+ EM G PC+++Y+T + Y + FS+V E++ M C
Sbjct: 708 KGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCR 767
Query: 305 PNVVTYTTVMSYLAKSGDFEEAI 327
PN +TY V+ K ++EA+
Sbjct: 768 PNELTYKIVVDGYCKGKKYKEAM 790
>gi|255660918|gb|ACU25628.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 484
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 194/389 (49%), Gaps = 14/389 (3%)
Query: 100 HYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEE 159
H LV ++H K + AL FRW +EH+ E + +++ILG+ +++ R +L +
Sbjct: 12 HELVYNVLHGSKTS-EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLD 70
Query: 160 MSKGHIVTLNTIAKVM-RRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
M K + + +M + AG +++V+ F ++ G+E+ T++ + L + + G+
Sbjct: 71 MPKKGLEWDEDMWVLMIDSYGKAGIVQESVKLFQKMEELGVERTTKSYDTLFKVILRRGR 130
Query: 219 VELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
+A+ F + L I P HTFN+ I G+ +V+ A +MK P VI+Y+T
Sbjct: 131 FMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFDDMKSREISPDVITYNT 190
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+I Y R + + EM+ + P VVTYTT++ ++A+R+ E+MK G
Sbjct: 191 MINGYYRVKKMDEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGYG 250
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP-DTSTFNTMITMFSHHGHHEK 396
KP++ ++ L+ L A ++ EA V + EM + +AP D S F +I+ G+ +
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMSEARSVLK-EMVDKYIAPTDNSIFMRLISGQCKTGNLDA 309
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK-------HHLSL 449
A VL+ M +L + L+++ K + D+ + +LLD ++ K L +
Sbjct: 310 AADVLKAMIRLS-VPTEAGHYGVLIENFCKADQHDKAV-KLLDKLIEKDIILRPQSTLHM 367
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMI 478
+ + Y +I LC + A L ++++
Sbjct: 368 EPSAYNPMIEYLCNNGQTAKAEALVRQLL 396
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 126/267 (47%), Gaps = 6/267 (2%)
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
+ ++++ A+ + +M G + +I SY + + +L +M+ G
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVLMIDSYGKAGIVQESVKLFQKMEELGVERTTK 116
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
+Y T+ + + G F A R KM G +P FN +I+ + +V+ A + +
Sbjct: 117 SYDTLFKVILRRGRFMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFD-D 175
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M ++PD T+NTMI + ++A EM K + +P V T+ L+K
Sbjct: 176 MKSREISPDVITYNTMINGYYRVKKMDEAEKYFVEM-KGRNIEPTVVTYTTLIKGYVSVD 234
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ D+ L +L+++M + + + TY+ ++ GLC A K A + KEM+ I P +
Sbjct: 235 QVDDAL-RLVEEM-KGYGIKPNAITYSTLLPGLCNAEKMSEARSVLKEMVDKYIAPTDNS 292
Query: 489 C--RLILDEVKQKHMYDAAEKIEAVMK 513
RLI + K ++ AA+ ++A+++
Sbjct: 293 IFMRLISGQCKTGNLDAAADVLKAMIR 319
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 5/205 (2%)
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N T+ ++ L ++ A I M G + D + +I + G+A VQE+V ++
Sbjct: 44 NRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVLMIDSYGKAGIVQESVKLF 103
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
Q +M E GV T +++T+ + G A +M E +P TF+ ++ F
Sbjct: 104 Q-KMEELGVERTTKSYDTLFKVILRRGRFMMAKRYFNKMLS-EGIEPTRHTFNVMIWGFF 161
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
+GK E ++ DDM ++ +S D+ TY +I+G R K + A F EM G +I P
Sbjct: 162 LSGKV-ETANRFFDDMKSRE-ISPDVITYNTMINGYYRVKKMDEAEKYFVEMKGRNIEPT 219
Query: 486 YQT-CRLILDEVKQKHMYDAAEKIE 509
T LI V + DA +E
Sbjct: 220 VVTYTTLIKGYVSVDQVDDALRLVE 244
>gi|224085974|ref|XP_002307761.1| predicted protein [Populus trichocarpa]
gi|222857210|gb|EEE94757.1| predicted protein [Populus trichocarpa]
Length = 563
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 106/410 (25%), Positives = 190/410 (46%), Gaps = 12/410 (2%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS 161
+V ++++R ++ + F WA P + Y +++ LG+ + +D M L E+
Sbjct: 135 VVAEVLNRGNLGGEAMIMFFNWAIKQPMISKDVDSYNVVIRALGRRKFIDFMVKFLHELR 194
Query: 162 -KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGT-FGLEKNTETMNLLLDTLCKEGKV 219
+G + T + V+ A + A++ F L FG E++ E++N+LL LC+ V
Sbjct: 195 VEGVSMNSETFSIVIDSLVRARRVYKAIQMFGNLEEEFGFERDAESLNVLLQCLCRRSHV 254
Query: 220 ELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
A S F +K IP N T+N+ I GW K RV E Q +EM+ G P +S+S ++
Sbjct: 255 GAANSYFNSVKGKIPFNCMTYNVIIGGWSKFGRVSEMQRVFEEMEEDGFSPDCLSFSYLL 314
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
+ R + M+ +GC P+ Y ++S G+F+E ++ +
Sbjct: 315 EGLGRAGKIEDAVMIFGSMEEKGCVPDTNVYNAMISNFISVGNFDECMKYYRCLLSKNCD 374
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
P+ + +I L +AS+V +A+ ++ EM + G+ T T + I G A
Sbjct: 375 PNIDTYTRMISGLIKASKVADALEMFD-EMLDRGMVTKTGTVTSFIEPLCSFGPPHAAMV 433
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIH 459
+ + K+ CK ++ + LL + GK L ++ D+M + S D+ Y +I
Sbjct: 434 IYTKARKV-GCKISLSAYKLLLMRLSRFGKCGMML-KIWDEMQESGY-SSDMEVYEYLIS 490
Query: 460 GLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIE 509
GLC + E A L+ +E + P R I ++ K + A+ K+E
Sbjct: 491 GLCNIGQFENAVLVMEESMRKGFCP----SRFICSKLNNKLL--ASNKVE 534
>gi|255660892|gb|ACU25615.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
Length = 481
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 192/389 (49%), Gaps = 14/389 (3%)
Query: 100 HYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEE 159
H LV ++H K + AL F W +EH+ E + +++ILG+ +++ R +L +
Sbjct: 12 HELVYNVLHSSKTS-EHALQFFXWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLD 70
Query: 160 M-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
M KG + ++ + G +++V+ F ++ G+E+ ++ N L + + G+
Sbjct: 71 MPKKGLEWDEDMWVMMIDSYGKQGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGR 130
Query: 219 VELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
+A+ F + L I P HTFN+ I G+ +V+ A ++MK P V++Y+T
Sbjct: 131 YMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNT 190
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+I Y R + + EM+ + P VVTYTT++ ++A+R+ E+MK G
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFG 250
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP-DTSTFNTMITMFSHHGHHEK 396
KP++ ++ L+ L A ++ EA V EM + +AP D S F +I+ G+ +
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMSEA-RVXLKEMMDKYLAPTDNSIFMRLISSHCKSGNLDA 309
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK-------HHLSL 449
A VL+ M +L + L+++ K G+ D+ + +LLD ++ K L L
Sbjct: 310 AADVLKAMXRLS-VPTEAGHYGVLIENFCKXGQYDKAV-KLLDKLIEKDIILRPQSTLHL 367
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMI 478
+ + Y +I LC + A L ++++
Sbjct: 368 EPSAYNPMIEYLCNNGQAAKAETLVRQLL 396
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 132/311 (42%), Gaps = 4/311 (1%)
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQ 257
E N ET +++ L + K+ AR + L++ K + + + + I + K V E+
Sbjct: 41 FEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKQGIVQESV 100
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
Q+M+ G + SY+ + + R+ + ++M ++G P T+ ++
Sbjct: 101 KMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGF 160
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
SG E A R E MK PD +N +I R +++EA Y VEM + P
Sbjct: 161 FLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEK-YFVEMKGRNIEPT 219
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
T+ T+I + + A ++EEM KPN T+ LL K E
Sbjct: 220 VVTYTTLIKGYVSVDQVDDALRLVEEMKGF-GIKPNAITYSTLLPGLCNAEKMSEA-RVX 277
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVK 497
L +M++K+ D + + +I C++ + A + K M + ++++
Sbjct: 278 LKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMXRLSVPTEAGHYGVLIENFC 337
Query: 498 QKHMYDAAEKI 508
+ YD A K+
Sbjct: 338 KXGQYDKAVKL 348
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 125/267 (46%), Gaps = 6/267 (2%)
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
+ ++++ A+ + +M G + +I SY +Q + ++ +M+ G +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKQGIVQESVKMFQKMEELGVERTIK 116
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
+Y + + + G + A R KM G +P FN +I+ + +V+ A ++ +
Sbjct: 117 SYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFE-D 175
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M ++PD T+NTMI + E+A EM K + +P V T+ L+K
Sbjct: 176 MKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEM-KGRNIEPTVVTYTTLIKGYVSVD 234
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ D+ L +L+++M + + TY+ ++ GLC A K A + KEM+ + P +
Sbjct: 235 QVDDAL-RLVEEM-KGFGIKPNAITYSTLLPGLCNAEKMSEARVXLKEMMDKYLAPTDNS 292
Query: 489 C--RLILDEVKQKHMYDAAEKIEAVMK 513
RLI K ++ AA+ ++A+ +
Sbjct: 293 IFMRLISSHCKSGNLDAAADVLKAMXR 319
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 5/205 (2%)
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N T+ ++ L ++ A I M G + D + +I + G+ VQE+V ++
Sbjct: 44 NRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKQGIVQESVKMF 103
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
Q +M E GV ++N + + G + A +M E +P TF+ ++ F
Sbjct: 104 Q-KMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLS-EGIEPTRHTFNVMIWGFF 161
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
+GK E ++ +DM ++ +S D+ TY +I+G R K E A F EM G +I P
Sbjct: 162 LSGKV-ETANRFFEDMKSRE-ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPT 219
Query: 486 YQT-CRLILDEVKQKHMYDAAEKIE 509
T LI V + DA +E
Sbjct: 220 VVTYTTLIKGYVSVDQVDDALRLVE 244
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 111/436 (25%), Positives = 192/436 (44%), Gaps = 52/436 (11%)
Query: 115 KSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNT 170
K AL +++ S G + S + Y ++ LG+ R + LLEEM + +I T
Sbjct: 209 KEALKVYKRMIS-EGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTI 267
Query: 171 IAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK 230
+V+ R AG+ +DA + G + T +L+D LC GK++ A+ ++ +++
Sbjct: 268 CIRVLGR---AGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMR 324
Query: 231 SC------------------------------------IPPNAHTFNIFIHGWCKINRVD 254
+ P+ T+ I + CK +VD
Sbjct: 325 ASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVD 384
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
+A + M+ G P + +Y+T+I + EL + M++ G P +Y +
Sbjct: 385 QAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFI 444
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
Y K GD E+A+ EKMK G P N +Y+L R++EA ++ ++ G+
Sbjct: 445 DYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFN-DIHNCGL 503
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
+PD+ T+N M+ +S G +KA +L EM E C+P++ + L+ + +K G+ DE
Sbjct: 504 SPDSVTYNMMMKCYSKAGQIDKATKLLTEMLS-EGCEPDIIVVNSLIDTLYKAGRVDEAW 562
Query: 435 SQL--LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLI 492
L D+ L+ + TY ++I GL + K A LF M P T +
Sbjct: 563 QMFGRLKDL----KLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNAL 618
Query: 493 LDEVKQKHMYDAAEKI 508
LD + + D A K+
Sbjct: 619 LDCLCKNDAVDLALKM 634
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 176/409 (43%), Gaps = 42/409 (10%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +++D L ++D+ + L +M + H L T +M +F G E R + E+
Sbjct: 300 YTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEME 359
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVD 254
G + T +L++ LCK GKV+ A + ++ I PN HT+N I G + R+D
Sbjct: 360 ADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLD 419
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV------- 307
EA M+ G P SY I Y + + K + ++M+ +G P++
Sbjct: 420 EALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASL 479
Query: 308 ----------------------------VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
VTY +M +K+G ++A ++ +M G +
Sbjct: 480 YSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCE 539
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
PD N LI TL +A RV EA ++ + + +AP T+N +IT G KA
Sbjct: 540 PDIIVVNSLIDTLYKAGRVDEAWQMFG-RLKDLKLAPTVVTYNILITGLGKEGKLLKALD 598
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIH 459
+ M K C PN TF+ LL K D L + + S D+ TY +I+
Sbjct: 599 LFGSM-KESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTI--MNCSPDVLTYNTIIY 655
Query: 460 GLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
GL + + +A+ + +M ++P + T +L V + + A KI
Sbjct: 656 GLIKEGRAGYAFWFYHQMKKF-LSPDHVTLYTLLPGVVKDGRVEDAIKI 703
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 183/376 (48%), Gaps = 7/376 (1%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTI-AKVMRRFSGAGQWEDAVRTFDEL 194
+Y ++ ++ R D ++ ++E + + + T N + ++M + E+A+ + L
Sbjct: 684 LYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGL 743
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIP--PNAHTFNIFIHGWCKINR 252
+ ++ + L+ LCK+ K A+ +F + + P ++N + G N
Sbjct: 744 VCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNI 803
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
+ A EMK GC P + +Y+ ++ ++ + +++EL +EM +GC PN++T+
Sbjct: 804 TEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNI 863
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN 372
++S L KS +A+ + ++ P + LI L +A R +EA+ +++ EMP+
Sbjct: 864 IISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFE-EMPDY 922
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
P+ + +N +I F G+ A + + M K E +P+++++ L++ F TG+ D+
Sbjct: 923 QCKPNCAIYNILINGFGKAGNVNIACDLFKRMIK-EGIRPDLKSYTILVECLFMTGRVDD 981
Query: 433 CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLI 492
+ + + L D +Y L+I+GL ++ + E A LF EM I+P T +
Sbjct: 982 AVHYF--EELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNAL 1039
Query: 493 LDEVKQKHMYDAAEKI 508
+ M D A K+
Sbjct: 1040 ILHFGNAGMVDQAGKM 1055
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 114/453 (25%), Positives = 197/453 (43%), Gaps = 24/453 (5%)
Query: 73 KVHVGSSEDEVFQ-SLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSA---LGIFRWAG-SC 127
+VH G ED F L Q V N P+ YL K + A LG R AG
Sbjct: 133 RVH-GRVEDMAFVFDLMQKQVINR-NPNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVL 190
Query: 128 PGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDA 187
Y ++ IY ++ K + + ++ E K + T + + + R G D
Sbjct: 191 NAYSYNGLIYFLLQPGFCK-EALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDL 249
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIH 245
+ +E+ T GL N T + + L + G+++ A + +E + C P+ T+ + I
Sbjct: 250 L---EEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGC-GPDVVTYTVLID 305
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
C ++D+A+ +M+ P +++Y T++ + + V EM+A G P
Sbjct: 306 ALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAP 365
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
+VVTYT ++ L KSG ++A + + M++ G P+ +N LI L R+ EA+ ++
Sbjct: 366 DVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELF 425
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
M GVAP ++ I + G EKA E+M K P++ + L S
Sbjct: 426 N-NMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKK-RGIMPSIAACNASLYSLA 483
Query: 426 KTGKTDECLSQLLDDMVNKHH---LSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
+ G+ E D+ N H LS D TY +++ +A + + A L EM+
Sbjct: 484 EMGRIREA-----KDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGC 538
Query: 483 TPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
P ++D + + D A ++ +K L
Sbjct: 539 EPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDL 571
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 171/361 (47%), Gaps = 6/361 (1%)
Query: 79 SEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKS--ALGIFRWAGSCPGYEHSSEI 136
+E E S + VCN+I L+ LI K+ A +F G + E
Sbjct: 731 AEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPES 790
Query: 137 YEMMVD-ILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++D +LG ++ +E + G + T ++ + + ++ ++E+
Sbjct: 791 YNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEML 850
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVD 254
G + N T N+++ L K + A ++ E+ S P T+ I G K R +
Sbjct: 851 CRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSE 910
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA +EM + C P Y+ +I + + N + +L M +G P++ +YT ++
Sbjct: 911 EAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILV 970
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
L +G ++A+ E++K+ G PD+ +N +I LG++ R++EA+ ++ EM G+
Sbjct: 971 ECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFS-EMKNRGI 1029
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
+P+ T+N +I F + G ++A + EE+ + +PNV T++ L++ K+G D
Sbjct: 1030 SPELYTYNALILHFGNAGMVDQAGKMFEEL-QFMGLEPNVFTYNALIRGHSKSGNKDRAF 1088
Query: 435 S 435
S
Sbjct: 1089 S 1089
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 151/319 (47%), Gaps = 19/319 (5%)
Query: 115 KSALGIF---RWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM----SKGHIVT 167
++AL +F + AG CP + Y +++D GK +++D++ L EM K +I+T
Sbjct: 805 EAALKLFVEMKNAGCCP----NIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIIT 860
Query: 168 LNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFL 227
N I + + + A+ + E+ + T L+ L K G+ E A +F
Sbjct: 861 HNIIISALVK---SNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFE 917
Query: 228 ELKS--CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQ 285
E+ C PN +NI I+G+ K V+ A + M G P + SY+ +++
Sbjct: 918 EMPDYQC-KPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMT 976
Query: 286 YNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFF 345
+E++ G P+ V+Y +++ L KS EEA+ + +MK G P+ +
Sbjct: 977 GRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTY 1036
Query: 346 NCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMN 405
N LI G A V +A +++ E+ G+ P+ T+N +I S G+ ++AF V ++M
Sbjct: 1037 NALILHFGNAGMVDQAGKMFE-ELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKM- 1094
Query: 406 KLEHCKPNVQTFHPLLKSC 424
+ C PN TF L C
Sbjct: 1095 MIVGCSPNAGTFAQLPNKC 1113
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 157/356 (44%), Gaps = 39/356 (10%)
Query: 169 NTIAKVMRRFSGAGQWEDAVRTFDELG-TFGLEKNTETMNLLLDTLCKEGKVELARSVFL 227
N I ++R + DA + FD+ + G E+ N L+D L E A +F+
Sbjct: 753 NLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFV 812
Query: 228 ELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQY 286
E+K+ PN T+N+ + K R+DE EM GC P +I+++ II + +
Sbjct: 813 EMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSN 872
Query: 287 NFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFN 346
+ +K +L E+ + P TY ++ L K+G EEA++I E+M KP+ +N
Sbjct: 873 SINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYN 932
Query: 347 CLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNK 406
LI G+A V A +++ M + G+ PD ++ ++ G + A H EE+ K
Sbjct: 933 ILINGFGKAGNVNIACDLFK-RMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEEL-K 990
Query: 407 LEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKH--------------------- 445
L P+ +++ ++ K+ + +E LS L +M N+
Sbjct: 991 LTGLDPDTVSYNLMINGLGKSRRLEEALS-LFSEMKNRGISPELYTYNALILHFGNAGMV 1049
Query: 446 -------------HLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
L ++ TY +I G ++ + A+ +FK+M+ +P T
Sbjct: 1050 DQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGT 1105
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 103/460 (22%), Positives = 196/460 (42%), Gaps = 15/460 (3%)
Query: 61 SPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKD--DWKSAL 118
+P + +++ + D+ F L V I P+ + N LI + AL
Sbjct: 364 APDVVTYTILVEALCKSGKVDQAFDMLDVMRV-RGIVPNLHTYNTLISGLLNLRRLDEAL 422
Query: 119 GIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRR 177
+F S G ++ Y + +D GK+ ++ E+M K G + ++ +
Sbjct: 423 ELFNNMESL-GVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYS 481
Query: 178 FSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPN 236
+ G+ +A F+++ GL ++ T N+++ K G+++ A + E+ S P+
Sbjct: 482 LAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPD 541
Query: 237 AHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLD 296
N I K RVDEA +K P V++Y+ +I ++ K +L
Sbjct: 542 IIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFG 601
Query: 297 EMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRAS 356
M+ GCPPN VT+ ++ L K+ + A+++ +M I+ PD +N +IY L +
Sbjct: 602 SMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEG 661
Query: 357 RVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQT 416
R A + Y + ++PD T T++ G E A ++ E + + Q
Sbjct: 662 RAGYAFWFYH--QMKKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQV 719
Query: 417 FHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKE 476
+ L++ + +E +S + + + + D +I LC+ K A LF +
Sbjct: 720 WGELMECILIEAEIEEAIS--FAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDK 777
Query: 477 M---IGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
+G TP C ++D + ++ +AA K+ MK
Sbjct: 778 FTKSLGTHPTPESYNC--LMDGLLGCNITEAALKLFVEMK 815
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 143/314 (45%), Gaps = 7/314 (2%)
Query: 204 ETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQE 262
ET N +L+ L G+VE VF L K I N +T+ + +A + + +
Sbjct: 123 ETCNYMLEFLRVHGRVEDMAFVFDLMQKQVINRNPNTYLTIFKALSIKGGIRQAPFALGK 182
Query: 263 MKGHGCHPCVISYSTIIQSYCRQYNFSK-VYELLDEMQAQGCPPNVVTYTTVMSYLAKSG 321
M+ G SY+ +I + Q F K ++ M ++G P++ TY+ +M L +
Sbjct: 183 MRQAGFVLNAYSYNGLIY-FLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRR 241
Query: 322 DFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTF 381
D + + E+M+ +G +P+ + I LGRA R+ +A + + M + G PD T+
Sbjct: 242 DTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKT-MEDEGCGPDVVTY 300
Query: 382 NTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDM 441
+I G +KA + +M H KP++ T+ L+ S F E + + +M
Sbjct: 301 TVLIDALCAAGKLDKAKELYTKMRASSH-KPDLVTYITLM-SKFGNYGDLETVKRFWSEM 358
Query: 442 VNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHM 501
+ + D+ TYT+++ LC++ K + A+ + M I P T ++ +
Sbjct: 359 EADGY-APDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRR 417
Query: 502 YDAAEKIEAVMKKL 515
D A ++ M+ L
Sbjct: 418 LDEALELFNNMESL 431
>gi|224143015|ref|XP_002324819.1| predicted protein [Populus trichocarpa]
gi|222866253|gb|EEF03384.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 115/430 (26%), Positives = 200/430 (46%), Gaps = 18/430 (4%)
Query: 93 CNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQ 152
C ++ L+N L+ + K + A IF ++ G++ S Y ++ L ++ D
Sbjct: 10 CRTVRSRTKLMNFLVEKGKP--QEAESIF-YSLIEGGHKPSLISYTTLLAALTMQKRFDS 66
Query: 153 MRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNL 208
+ +++ ++ + + + N V+ FS +G E A+ TF ++ G++ T T N
Sbjct: 67 IYSIISQVEENGMNPDSIFFNA---VINAFSESGNMESAMETFWKMQENGMKPTTSTYNT 123
Query: 209 LLDTLCKEGKVELARSVFLELKS---CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKG 265
L+ GK E + + LEL S + PN T+N+ + WC R+ EA + +M
Sbjct: 124 LIKGYGIAGKPEESVKL-LELMSQEGNVKPNLRTYNVLVRAWCNKKRITEAWNVVYKMIA 182
Query: 266 HGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEE 325
G P V++Y+TI +Y ++ + ++ EMQ G PN T +MS K G E
Sbjct: 183 SGIQPDVVTYNTIATAYAQKGALDQAEGVILEMQNNGVQPNERTCGIIMSGYCKEGRIRE 242
Query: 326 AIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMI 385
A+R +MK +G P+ FN LI A ++ V M E GV PD TF+T++
Sbjct: 243 ALRFAYRMKELGIHPNLVIFNSLIKGF-VAIMDRDGVDEVLNLMEEFGVKPDVITFSTIM 301
Query: 386 TMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKH 445
+S G EK + ++M K +P+ + L K + + E +LL M+ K
Sbjct: 302 NAWSTAGFMEKCREIFDDMVK-AGIEPDAHAYSILAKG-YVRAQEPEKAEELLTTMI-KS 358
Query: 446 HLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
++ +T VI G C A K ++A +F +M I+P +T ++ + A
Sbjct: 359 GFQPNVVIFTTVISGWCSAGKMDYAVRVFDKMCQRGISPNLKTFETLIWGFAEARQPWKA 418
Query: 506 EKIEAVMKKL 515
E+I +M +
Sbjct: 419 EEILQIMTEF 428
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 96/456 (21%), Positives = 202/456 (44%), Gaps = 50/456 (10%)
Query: 24 RFHSSSENCSHIVSSSPIESYCSDGARLDHHQVLCVD------SPRLPDIDVIISKVHVG 77
+F ++ ++C + S + + ++ + + + + P L +++ + +
Sbjct: 2 KFCTTKDSCRTVRSRTKLMNFLVEKGKPQEAESIFYSLIEGGHKPSLISYTTLLAALTMQ 61
Query: 78 SSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKD--DWKSALGIFRWAGSCPGYEHSSE 135
D ++ + Q N + P N +I+ F + + +SA+ F W G + ++
Sbjct: 62 KRFDSIYSIISQVEE-NGMNPDSIFFNAVINAFSESGNMESAMETF-WKMQENGMKPTTS 119
Query: 136 IYEMMVDILGKVRQMDQMRALLEEMSK-GHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDE 193
Y ++ G + ++ LLE MS+ G++ L T ++R + + +A +
Sbjct: 120 TYNTLIKGYGIAGKPEESVKLLELMSQEGNVKPNLRTYNVLVRAWCNKKRITEAWNVVYK 179
Query: 194 LGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINR 252
+ G++ + T N + ++G ++ A V LE+++ + PN T I + G+CK R
Sbjct: 180 MIASGIQPDVVTYNTIATAYAQKGALDQAEGVILEMQNNGVQPNERTCGIIMSGYCKEGR 239
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
+ EA MK G HP ++ ++++I+ + + V E+L+ M+ G P+V+T++T
Sbjct: 240 IREALRFAYRMKELGIHPNLVIFNSLIKGFVAIMDRDGVDEVLNLMEEFGVKPDVITFST 299
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFF--------------------------- 345
+M+ + +G E+ I + M G +PD+ +
Sbjct: 300 IMNAWSTAGFMEKCREIFDDMVKAGIEPDAHAYSILAKGYVRAQEPEKAEELLTTMIKSG 359
Query: 346 ---NCLIYTLG-----RASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKA 397
N +I+T A ++ AV V+ +M + G++P+ TF T+I F+ KA
Sbjct: 360 FQPNVVIFTTVISGWCSAGKMDYAVRVFD-KMCQRGISPNLKTFETLIWGFAEARQPWKA 418
Query: 398 FHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
+L+ M + E +P T + ++ TG T E
Sbjct: 419 EEILQIMTEFE-VQPEKSTMLLVAEAWRATGMTKEA 453
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 77/182 (42%), Gaps = 5/182 (2%)
Query: 150 MDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNL 208
+D++ L+EE K ++T +TI M +S AG E FD++ G+E + ++
Sbjct: 278 VDEVLNLMEEFGVKPDVITFSTI---MNAWSTAGFMEKCREIFDDMVKAGIEPDAHAYSI 334
Query: 209 LLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG 267
L + + E A + + KS PN F I GWC ++D A +M G
Sbjct: 335 LAKGYVRAQEPEKAEELLTTMIKSGFQPNVVIFTTVISGWCSAGKMDYAVRVFDKMCQRG 394
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
P + ++ T+I + K E+L M P T V +G +EA
Sbjct: 395 ISPNLKTFETLIWGFAEARQPWKAEEILQIMTEFEVQPEKSTMLLVAEAWRATGMTKEAN 454
Query: 328 RI 329
R+
Sbjct: 455 RL 456
>gi|225445998|ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940
[Vitis vinifera]
gi|297735424|emb|CBI17864.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 112/439 (25%), Positives = 204/439 (46%), Gaps = 47/439 (10%)
Query: 113 DWKSALGIFRWAGSCPGYEHSSEI----YEMMVDILGKVRQMDQMRALLEEMS-KGHIVT 167
+WK A+ +F+WA Y + +I E+MV ILG+ Q LL+E+S + + +
Sbjct: 150 NWKRAVLLFKWA-ILNLYSRNEKIDNQLVELMVRILGRESQHSVALRLLDEISVEEYSLD 208
Query: 168 LNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK------------ 215
+ ++ +S G++E A+ F+++ GL T N++LD K
Sbjct: 209 VRAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLL 268
Query: 216 ------------------------EGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKI 250
EG ++ AR F LKS T+N + + K
Sbjct: 269 DEMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKA 328
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
EA ++EM+ + C P +++Y+ ++ +Y R + + +D M +G PN +TY
Sbjct: 329 GIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITY 388
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
TTV++ K+G ++A+ +MK G P+ +N ++ LG+ SR++E + + +M
Sbjct: 389 TTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDML-CDMR 447
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKT 430
NG AP++ T+NTM+ M + G H+ V EM +PN TF+ L+ + + G
Sbjct: 448 SNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGF-EPNRDTFNALIGAYGRCGSQ 506
Query: 431 DECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCR 490
+ + ++ ++M+ K + +TTY +++ L R E A + +M P +
Sbjct: 507 IDVV-KMYEEMI-KAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYS 564
Query: 491 LILDEVKQKHMYDAAEKIE 509
L+L+ + EKIE
Sbjct: 565 LMLNCYAKGGNGRGIEKIE 583
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 98/403 (24%), Positives = 182/403 (45%), Gaps = 7/403 (1%)
Query: 114 WKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIA 172
W LG+ S G E ++ G+ +D+ R + S+G++ T
Sbjct: 261 WNKILGLLDEMRS-NGLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYN 319
Query: 173 KVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEG-KVELARSVFLELKS 231
+++ F AG + +A+ E+ + T N L+ + G E A + ++
Sbjct: 320 SLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRK 379
Query: 232 CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKV 291
I PNA T+ I+ + K + D+A ++MK GC P V +Y+ I+ ++ ++
Sbjct: 380 GIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEM 439
Query: 292 YELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYT 351
++L +M++ GC PN VT+ T+++ G + R+ +MK G +P+ FN LI
Sbjct: 440 IDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGA 499
Query: 352 LGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCK 411
GR + V +Y+ EM + G P +T+N ++ + G E A V+ +M K + K
Sbjct: 500 YGRCGSQIDVVKMYE-EMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDM-KSKGFK 557
Query: 412 PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAY 471
PN +T + L+ +C+ G + ++ +++ N H I TLV+ R
Sbjct: 558 PN-ETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKR-RALMGME 615
Query: 472 LLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
F+E H P +L + MYD A ++ ++++
Sbjct: 616 RAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRE 658
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/369 (20%), Positives = 146/369 (39%), Gaps = 83/369 (22%)
Query: 104 NKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKV-RQMDQMRALLEEMSK 162
NK +H++ + +FR SC G+E + + + ++ G+ Q+D ++ E +
Sbjct: 467 NKGMHKYVNR------VFREMKSC-GFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKA 519
Query: 163 GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEG----- 217
G + T ++ + G WE A ++ + G + N + +L+L+ K G
Sbjct: 520 GFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGI 579
Query: 218 -KVE-------------LARSVFLE-----------------LKSCIPPNAHTFNIFIHG 246
K+E L R++ L K P+ FN +
Sbjct: 580 EKIEEEIYNGHIFPSWILLRTLVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSI 639
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
+ K D A ++ ++ G P +++Y++++ Y R K E+L +Q G P+
Sbjct: 640 FAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPD 699
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
+V+Y TV+ + G +EAIR +M I G +P C++
Sbjct: 700 LVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRP------CIV----------------- 736
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH-CKPNVQTFHPLLKSCF 425
T+NT + +S G + V+ M ++H C+PN T+ ++
Sbjct: 737 -------------TYNTFVAGYSGKGMFSEVEEVISYM--IQHDCRPNELTYKIVVDGYC 781
Query: 426 KTGKTDECL 434
K K E +
Sbjct: 782 KGKKYKEAM 790
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 110/263 (41%), Gaps = 40/263 (15%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS 161
L+N L R DW++A + S G++ + Y +M++ K + + EE+
Sbjct: 531 LLNALARR--GDWEAAESVILDMKS-KGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIY 587
Query: 162 KGHI----VTLNTI--AKVMRR-----------FSGAGQWEDAVRTFDELGTF------- 197
GHI + L T+ A RR F G D V L F
Sbjct: 588 NGHIFPSWILLRTLVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYD 647
Query: 198 ------------GLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFI 244
GL+ + T N L+D + G+ + + KS P+ ++N I
Sbjct: 648 RAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVI 707
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
G+C+ + EA T+ EM G PC+++Y+T + Y + FS+V E++ M C
Sbjct: 708 KGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCR 767
Query: 305 PNVVTYTTVMSYLAKSGDFEEAI 327
PN +TY V+ K ++EA+
Sbjct: 768 PNELTYKIVVDGYCKGKKYKEAM 790
>gi|357122161|ref|XP_003562784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Brachypodium distachyon]
Length = 791
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 105/384 (27%), Positives = 182/384 (47%), Gaps = 18/384 (4%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++ L + + A+ M + VT N + V + A W++ + D
Sbjct: 179 YTALISALSRASRFRDAVAVFRRMVANGVCPALVTYNVVLHVYSKI--AVPWKEVLALVD 236
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKIN 251
+ G+ + T N L+ + + A VF E+++ P+ T N + + K
Sbjct: 237 SMRKDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDVYGKAR 296
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
R DEA ++EM+ GC P V++Y+++I SY + + +L +EM+ +G P+V+TYT
Sbjct: 297 RYDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIEPDVITYT 356
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
T++S L ++G + AI +M G KP+ +N LI G + E + V+ E+
Sbjct: 357 TLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIVFD-EIRS 415
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
G PD T+NT++ +F +G + V +EM K + P T+ L+ S + G D
Sbjct: 416 AGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYV-PERDTYVSLISSYSRCGLFD 474
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRL 491
+ + ++ M+ + + DI+TY V+ L R + E A LF EM D P +
Sbjct: 475 QAM-EIYKRMI-EAGIHPDISTYNAVLSALARGGRWEQAEKLFAEMENLDSRPDELSYSS 532
Query: 492 ILDEVKQKHMYDAAEKIEAVMKKL 515
+L H Y A+K++ MK L
Sbjct: 533 LL------HAYANAKKLDK-MKSL 549
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 114/475 (24%), Positives = 201/475 (42%), Gaps = 73/475 (15%)
Query: 83 VFQSLKQDHVCNAIQPSHYLVNKLIH--RFKDDWKSALGIFRWAGSCPGYEHSSEIYEMM 140
+ S+++D I Y N LI R + +K A +F + G+E +
Sbjct: 234 LVDSMRKD----GIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAA-GFEPDKVTLNSL 288
Query: 141 VDILGKVRQMDQMRALLEEMSKG----HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGT 196
+D+ GK R+ D+ +L+EM +G +VT N++ + + G E+A + +E+
Sbjct: 289 LDVYGKARRYDEAIGVLKEMEQGGCPPSVVTYNSL---ISSYVKDGLLEEATQLKEEMEV 345
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFI--HG------- 246
G+E + T L+ L + GK++ A + E L++ PN T+N I HG
Sbjct: 346 KGIEPDVITYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPE 405
Query: 247 -------------------WCKI------NRVD-EAQWTIQEMKGHGCHPCVISYSTIIQ 280
W + N +D E +EMK G P +Y ++I
Sbjct: 406 MMIVFDEIRSAGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLIS 465
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
SY R F + E+ M G P++ TY V+S LA+ G +E+A ++ +M+ + S+P
Sbjct: 466 SYSRCGLFDQAMEIYKRMIEAGIHPDISTYNAVLSALARGGRWEQAEKLFAEMENLDSRP 525
Query: 341 DSRFFNCLIYTLGRASR------VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHH 394
D ++ L++ A + + E +Y ++E NG+ N+ + S
Sbjct: 526 DELSYSSLLHAYANAKKLDKMKSLSEDIYAERIE-SHNGLVKTLVLVNSKVNNLS---DT 581
Query: 395 EKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG---KTDECLSQLLDDMVNKHHLSLDI 451
EKAF L + C ++ + ++ K G K +E LS + + +N L
Sbjct: 582 EKAFLEL----RRRRCSLDINVLNAMISIYGKNGMVKKVEEILSLMKESSIN-----LST 632
Query: 452 TTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP-RYQTCRLILDEVKQKHMYDAA 505
TY ++H R CE + E+ P RY +I ++ M +A+
Sbjct: 633 ATYNSLMHMYSRLGDCEKCENILTEIKSSRARPDRYSYNTMIYAYGRKGQMKEAS 687
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 126/265 (47%), Gaps = 24/265 (9%)
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCR-QYNFSKVYE 293
P+A + I + +R +A + M +G P +++Y+ ++ Y + + +V
Sbjct: 174 PDASAYTALISALSRASRFRDAVAVFRRMVANGVCPALVTYNVVLHVYSKIAVPWKEVLA 233
Query: 294 LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLG 353
L+D M+ G P + TY T++S + ++EA ++ ++M+ G +PD N L+ G
Sbjct: 234 LVDSMRKDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDVYG 293
Query: 354 RASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPN 413
+A R EA+ V + EM + G P T+N++I+ + G E+A + EEM +++ +P+
Sbjct: 294 KARRYDEAIGVLK-EMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEM-EVKGIEPD 351
Query: 414 VQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLL 473
V T+ L+ + GK D I TY ++ C+ N C + L+
Sbjct: 352 VITYTTLVSGLDRAGKIDAA-----------------IGTYNEMLRNGCKPNLCTYNALI 394
Query: 474 FKEMIGHDITPRYQTCRLILDEVKQ 498
H + ++ ++ DE++
Sbjct: 395 KL----HGVRGKFPEMMIVFDEIRS 415
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/372 (20%), Positives = 162/372 (43%), Gaps = 50/372 (13%)
Query: 94 NAIQPSHYLVNKLI--HRFKDDWKSALGIF---RWAGSCPGYEHSSEIYEMMVDILGKVR 148
N +P+ N LI H + + + +F R AG P + ++ + G+
Sbjct: 381 NGCKPNLCTYNALIKLHGVRGKFPEMMIVFDEIRSAGFVP----DVVTWNTLLAVFGQNG 436
Query: 149 QMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN 207
++ + +EM K G++ +T ++ +S G ++ A+ + + G+ + T N
Sbjct: 437 LDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIHPDISTYN 496
Query: 208 LLLDTLCKEGKVELARSVFLELKSCIP-PNAHTFNIFIHGWC------------------ 248
+L L + G+ E A +F E+++ P+ +++ +H +
Sbjct: 497 AVLSALARGGRWEQAEKLFAEMENLDSRPDELSYSSLLHAYANAKKLDKMKSLSEDIYAE 556
Query: 249 -----------------KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKV 291
K+N + + + E++ C + + +I Y + KV
Sbjct: 557 RIESHNGLVKTLVLVNSKVNNLSDTEKAFLELRRRRCSLDINVLNAMISIYGKNGMVKKV 616
Query: 292 YELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYT 351
E+L M+ + TY ++M ++ GD E+ I ++K ++PD +N +IY
Sbjct: 617 EEILSLMKESSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSRARPDRYSYNTMIYA 676
Query: 352 LGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH-C 410
GR +++EA ++ EM +G+ PD T+N + + + E+A ++ M + H C
Sbjct: 677 YGRKGQMKEASRLFS-EMKCSGLVPDIVTYNIFVKSYVANSMFEEAIDLVRYM--VTHGC 733
Query: 411 KPNVQTFHPLLK 422
KPN +T++ +L+
Sbjct: 734 KPNERTYNTILQ 745
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/439 (21%), Positives = 177/439 (40%), Gaps = 48/439 (10%)
Query: 98 PSHYLVNKLIHRF-KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRAL 156
PS N LI + KD + G E Y +V L + ++D
Sbjct: 315 PSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIEPDVITYTTLVSGLDRAGKIDAAIGT 374
Query: 157 LEEM----SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDT 212
EM K ++ T N + K+ G++ + + FDE+ + G + T N LL
Sbjct: 375 YNEMLRNGCKPNLCTYNALIKL---HGVRGKFPEMMIVFDEIRSAGFVPDVVTWNTLLAV 431
Query: 213 LCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPC 271
+ G VF E+K S P T+ I + + D+A + M G HP
Sbjct: 432 FGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIHPD 491
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
+ +Y+ ++ + R + + +L EM+ P+ ++Y++++ A + ++ ++E
Sbjct: 492 ISTYNAVLSALARGGRWEQAEKLFAEMENLDSRPDELSYSSLLHAYANAKKLDKMKSLSE 551
Query: 332 K---------------MKIVGSKP--------------------DSRFFNCLIYTLGRAS 356
+ +V SK D N +I G+
Sbjct: 552 DIYAERIESHNGLVKTLVLVNSKVNNLSDTEKAFLELRRRRCSLDINVLNAMISIYGKNG 611
Query: 357 RVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQT 416
V++ + + M E+ + T+T+N+++ M+S G EK ++L E+ K +P+ +
Sbjct: 612 MVKKVEEILSL-MKESSINLSTATYNSLMHMYSRLGDCEKCENILTEI-KSSRARPDRYS 669
Query: 417 FHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKE 476
++ ++ + + G+ E S+L +M L DI TY + + + E A L +
Sbjct: 670 YNTMIYAYGRKGQMKEA-SRLFSEM-KCSGLVPDIVTYNIFVKSYVANSMFEEAIDLVRY 727
Query: 477 MIGHDITPRYQTCRLILDE 495
M+ H P +T IL E
Sbjct: 728 MVTHGCKPNERTYNTILQE 746
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 170/346 (49%), Gaps = 5/346 (1%)
Query: 170 TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL 229
TI ++ F + DAV D++ G + N ++D+LCK +V A F E+
Sbjct: 157 TIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEI 216
Query: 230 -KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
+ I PN T+ ++G C R ++A +++M P VI+YS ++ ++ +
Sbjct: 217 GRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKV 276
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
+ E+ +EM P++VTY+++++ L +EA ++ + M G PD +N L
Sbjct: 277 LEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTL 336
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
I +A RV++ + +++ +M + G+ +T T+NT+I F G +KA +M+
Sbjct: 337 INGFCKAKRVEDGMKLFR-KMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSF- 394
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
P++ T++ LL G ++ L + +DM K + LDI TYT VI G+C+ K E
Sbjct: 395 GVSPDIWTYNILLGGLCDNGLLEKALV-IFEDM-QKSEMDLDIVTYTTVIQGMCKTGKVE 452
Query: 469 WAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
A+ LF + + P T ++ + K + E + MK+
Sbjct: 453 DAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQ 498
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 144/295 (48%), Gaps = 4/295 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDA 187
GY Y ++D L K R+++ +E+ KG + T ++ +G+W DA
Sbjct: 185 GYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDA 244
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHG 246
R ++ + N T + LLD K GKV A+ +F E+ + I P+ T++ I+G
Sbjct: 245 ARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLING 304
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C +R+DEA M GC P V+SY+T+I +C+ +L +M +G N
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNN 364
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
VTY T++ + GD ++A +M G PD +N L+ L +++A+ +++
Sbjct: 365 TVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFE 424
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLL 421
+M ++ + D T+ T+I G E A+ + ++ L+ KP++ T+ ++
Sbjct: 425 -DMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLS-LKGLKPDIVTYTTMM 477
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 145/318 (45%), Gaps = 40/318 (12%)
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVD 254
G+ + T N++++ C +V LA SV + LK P+ T ++G+C+ NRV
Sbjct: 113 VLGIRNDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVS 172
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
+A + +M G P +++Y+ II S C+ + + E+ +G PNVVTYT ++
Sbjct: 173 DAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALV 232
Query: 315 SYLAKSGDFEEAIRITEKM-----------------------KIVGSK------------ 339
+ L SG + +A R+ M K++ +K
Sbjct: 233 NGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSID 292
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
PD ++ LI L R+ EA ++ + M G PD ++NT+I F E
Sbjct: 293 PDIVTYSSLINGLCLHDRIDEANQMFDL-MVSKGCFPDVVSYNTLINGFCKAKRVEDGMK 351
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIH 459
+ +M++ N T++ L++ F+ G D+ +Q ++ +S DI TY +++
Sbjct: 352 LFRKMSQ-RGLVNNTVTYNTLIQGFFQVGDVDK--AQEFFSQMDSFGVSPDIWTYNILLG 408
Query: 460 GLCRANKCEWAYLLFKEM 477
GLC E A ++F++M
Sbjct: 409 GLCDNGLLEKALVIFEDM 426
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 134/274 (48%), Gaps = 5/274 (1%)
Query: 212 TLCKEGKVELARSVFLELKSCIP-PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHP 270
T ++ K+ A ++F E+ P P+ FN + K+ + D ++M+ G
Sbjct: 59 TRLRDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRN 118
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRIT 330
+ +++ +I +C + S +L +M G P+ VT ++++ + +A+ +
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178
Query: 331 EKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSH 390
+KM +G +PD +N +I +L + RV +A+ ++ E+ G+ P+ T+ ++ +
Sbjct: 179 DKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFK-EIGRKGIRPNVVTYTALVNGLCN 237
Query: 391 HGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLD 450
G A +L +M K PNV T+ LL + K GK E ++ ++MV + + D
Sbjct: 238 SGRWNDAARLLRDMIK-RKITPNVITYSALLDAFVKNGKVLEA-KEIFEEMV-RMSIDPD 294
Query: 451 ITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
I TY+ +I+GLC ++ + A +F M+ P
Sbjct: 295 IVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFP 328
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 99/193 (51%), Gaps = 9/193 (4%)
Query: 146 KVRQMDQMRALLEEMSKG---HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKN 202
++ + +QM L+ +SKG +V+ NT+ + F A + ED ++ F ++ GL N
Sbjct: 310 RIDEANQMFDLM--VSKGCFPDVVSYNTL---INGFCKAKRVEDGMKLFRKMSQRGLVNN 364
Query: 203 TETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQ 261
T T N L+ + G V+ A+ F ++ S + P+ T+NI + G C +++A +
Sbjct: 365 TVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFE 424
Query: 262 EMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSG 321
+M+ +++Y+T+IQ C+ + L + +G P++VTYTT+MS L G
Sbjct: 425 DMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484
Query: 322 DFEEAIRITEKMK 334
E + KMK
Sbjct: 485 LQHEVEALYTKMK 497
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 105/229 (45%), Gaps = 9/229 (3%)
Query: 82 EVFQSLKQDHVCNAIQPSHYLVNKL-IHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMM 140
E+F+ + + + I L+N L +H D+ + G P Y +
Sbjct: 281 EIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVS----YNTL 336
Query: 141 VDILGKVRQMDQMRALLEEMSKGHIVTLNTIA--KVMRRFSGAGQWEDAVRTFDELGTFG 198
++ K ++++ L +MS+ +V NT+ +++ F G + A F ++ +FG
Sbjct: 337 INGFCKAKRVEDGMKLFRKMSQRGLVN-NTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFG 395
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQ 257
+ + T N+LL LC G +E A +F ++ KS + + T+ I G CK +V++A
Sbjct: 396 VSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAW 455
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
+ G P +++Y+T++ C + +V L +M+ +G N
Sbjct: 456 GLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLMKN 504
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 180/375 (48%), Gaps = 41/375 (10%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
+Y ++D + KV+ +++ L EM SKG + T + ++ F G+ +DA+ F+++
Sbjct: 227 MYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKM 286
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRV 253
++ + T N+L++ CK+GK++ ++VF + +K I PN T+N + G+C + V
Sbjct: 287 ILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEV 346
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
++A+ M G +P + SYS +I +C+ F + L EM + P+VVTY+++
Sbjct: 347 NKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSL 406
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
+ L+KSG A+++ ++M G P+ +N ++ L + +V +A+ + + + G
Sbjct: 407 IDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALL-TKFKDKG 465
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
PD ST++ +I G E A V E++ L+K
Sbjct: 466 FQPDISTYSILIKGLCQSGKLEDARKVFEDL---------------LVKG---------- 500
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
+LD+ YT++I G C A L +M + P +T +I+
Sbjct: 501 -------------YNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIII 547
Query: 494 DEVKQKHMYDAAEKI 508
+ +K D AEK+
Sbjct: 548 LSLFKKDENDMAEKL 562
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 158/332 (47%), Gaps = 11/332 (3%)
Query: 178 FSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNA 237
F G A F ++ G +T T L LC +G+++ A FL +
Sbjct: 130 FCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQA---FLFHDKVVALGF 186
Query: 238 H----TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
H ++ IHG CK+ A +Q + G+ P V+ Y+TII S C+ ++ ++
Sbjct: 187 HFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFD 246
Query: 294 LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLG 353
L EM ++G P+VVTY+ ++S G ++AI + KM + KPD FN L+
Sbjct: 247 LFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFC 306
Query: 354 RASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPN 413
+ +++E V+ + M + G+ P+ T+N+++ + KA + M + P+
Sbjct: 307 KDGKMKEGKTVFDMMMKQ-GIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQ-GGVNPD 364
Query: 414 VQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLL 473
+Q++ ++ K K DE ++ L +M K+ + D+ TY+ +I GL ++ + +A L
Sbjct: 365 IQSYSIMINGFCKIKKFDEAMN-LFKEMHRKNIIP-DVVTYSSLIDGLSKSGRISYALQL 422
Query: 474 FKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
+M + P T ILD + + H D A
Sbjct: 423 VDQMHDRGVPPNICTYNSILDALCKTHQVDKA 454
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 138/324 (42%), Gaps = 42/324 (12%)
Query: 219 VELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYS 276
V+ A S+F L ++ PP A FN + K + Q+M+ G P +++ +
Sbjct: 66 VDDAVSLFNRLLRRNTTPP-AFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCN 124
Query: 277 TIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIV 336
+I +C+ + + ++ G P+ +T+TT+ L G ++A +K+ +
Sbjct: 125 ILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVAL 184
Query: 337 G-----------------------------------SKPDSRFFNCLIYTLGRASRVQEA 361
G +P+ +N +I ++ + V EA
Sbjct: 185 GFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEA 244
Query: 362 VYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLL 421
++ EM G++PD T++ +I+ F G + A + +M LE+ KP+V TF+ L+
Sbjct: 245 FDLFS-EMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKM-ILENIKPDVYTFNILV 302
Query: 422 KSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHD 481
+ K GK E + + DM+ K + + TY ++ G C + A +F M
Sbjct: 303 NAFCKDGKMKE--GKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGG 360
Query: 482 ITPRYQTCRLILDEVKQKHMYDAA 505
+ P Q+ ++++ + +D A
Sbjct: 361 VNPDIQSYSIMINGFCKIKKFDEA 384
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 113/277 (40%), Gaps = 38/277 (13%)
Query: 273 ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEK 332
ISYS+ ++ + L + + + P + ++ L KS + + +++K
Sbjct: 51 ISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQK 110
Query: 333 MKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
M+ G KP+ N LI + + A V+ ++ + G PDT TF T+ G
Sbjct: 111 MEFRGIKPNLVNCNILINCFCQLGLIPFAFSVF-AKILKMGYVPDTITFTTLSKGLCLKG 169
Query: 393 HHEKAFHVLEEMNKLEH--------------CK--------------------PNVQTFH 418
++AF +++ L CK PNV ++
Sbjct: 170 QIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYN 229
Query: 419 PLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
++ S K +E L +MV+K +S D+ TY+ +I G C K + A LF +MI
Sbjct: 230 TIIDSMCKVKLVNEAF-DLFSEMVSK-GISPDVVTYSALISGFCILGKLKDAIDLFNKMI 287
Query: 479 GHDITPRYQTCRLILDEV-KQKHMYDAAEKIEAVMKK 514
+I P T ++++ K M + + +MK+
Sbjct: 288 LENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQ 324
>gi|218185204|gb|EEC67631.1| hypothetical protein OsI_35025 [Oryza sativa Indica Group]
Length = 800
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 177/361 (49%), Gaps = 7/361 (1%)
Query: 151 DQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG-TFGLEKNTETMNL 208
D + L+ MS G T + ++ ++ AG A + L +G N
Sbjct: 325 DAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNR 384
Query: 209 LLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG 267
LL L ++ + + AR ++ E L + ++ + + G C RV+E I+ G G
Sbjct: 385 LLKLLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAG 444
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
C P V+ Y+ +I YCR+ + + LL EM+A+G P +VTY ++++ L K GD E+
Sbjct: 445 CIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIG 504
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITM 387
+ +M+ G P+ + +N +I L + +A+ + + +M +G PD TFNT+IT
Sbjct: 505 SLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILK-QMFASGCDPDIITFNTLITG 563
Query: 388 FSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHL 447
H GH KA H L E + E PN ++ PL+ G+ S LL +M+ + H
Sbjct: 564 LCHEGHVRKAEHFLREAIRRE-LNPNQLSYTPLIHGFCMRGEL-MAASDLLMEMMGRGH- 620
Query: 448 SLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEK 507
+ D+ T+ +IHGL A K A ++ ++M + P +++ + +KHM AA+
Sbjct: 621 TPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKN 680
Query: 508 I 508
I
Sbjct: 681 I 681
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 144/326 (44%), Gaps = 20/326 (6%)
Query: 122 RWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALL---EEMSKGHIVTLNTIAKVMRRF 178
RW C + Y +++D G R+ D R LL E +KG + TL T ++
Sbjct: 440 RWGAGCIPH---VVFYNVLID--GYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCL 494
Query: 179 SGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNA 237
G E F E+ GL N + N ++D LCK A + ++ S P+
Sbjct: 495 GKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDI 554
Query: 238 HTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDE 297
TFN I G C V +A+ ++E +P +SY+ +I +C + +LL E
Sbjct: 555 ITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLME 614
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
M +G P+VVT+ ++ L +G EA+ + EKM PD +N LI L +
Sbjct: 615 MMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHM 674
Query: 358 VQEAVYVYQVEMPENGVAPDTSTFNTMITMF---SHHGHHEKAFHVLEEMNKLEHCKPNV 414
+ A + + EM E V PD + T+I F + G K F +E + +P++
Sbjct: 675 LPAAKNILE-EMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEH----KGVRPDI 729
Query: 415 QTFHPLLKSCFKTGKTDE---CLSQL 437
+ + ++K + G E C+S +
Sbjct: 730 VSCNAMIKGYCQFGMMSEAILCMSNM 755
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 97/243 (39%), Gaps = 37/243 (15%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKG---HIVTLNTIA------------ 172
G + +IY ++D L K Q +L++M + G I+T NT+
Sbjct: 514 GLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKA 573
Query: 173 -----KVMRR---------------FSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDT 212
+ +RR F G+ A E+ G + T L+
Sbjct: 574 EHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHG 633
Query: 213 LCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPC 271
L GKV A V ++ + + P+ + +N+ I G CK + + A+ ++EM P
Sbjct: 634 LVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPD 693
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
Y+T+I + R N ++ + M+ +G P++V+ ++ + G EAI
Sbjct: 694 EFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMS 753
Query: 332 KMK 334
M+
Sbjct: 754 NMR 756
>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
Length = 822
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 177/361 (49%), Gaps = 7/361 (1%)
Query: 151 DQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG-TFGLEKNTETMNL 208
D + L+ MS G T + ++ ++ AG A + L +G N
Sbjct: 115 DAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNR 174
Query: 209 LLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG 267
LL L ++ + + AR ++ E L + ++ + + G C RV+E I+ G G
Sbjct: 175 LLKLLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAG 234
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
C P V+ Y+ +I YCR+ + + LL EM+A+G P +VTY ++++ L K GD E+
Sbjct: 235 CIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIG 294
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITM 387
+ +M+ G P+ + +N +I L + +A+ + + +M +G PD TFNT+IT
Sbjct: 295 SLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILK-QMFASGCDPDIITFNTLITG 353
Query: 388 FSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHL 447
H GH KA H L E + E PN ++ PL+ G+ S LL +M+ + H
Sbjct: 354 LCHEGHVRKAEHFLREAIRRE-LNPNQLSYTPLIHGFCMRGEL-MAASDLLMEMMGRGH- 410
Query: 448 SLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEK 507
+ D+ T+ +IHGL A K A ++ ++M + P +++ + +KHM AA+
Sbjct: 411 TPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKN 470
Query: 508 I 508
I
Sbjct: 471 I 471
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 105/416 (25%), Positives = 169/416 (40%), Gaps = 46/416 (11%)
Query: 122 RWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALL---EEMSKGHIVTLNTIAKVMRRF 178
RW C + Y +++D G R+ D R LL E +KG + TL T ++
Sbjct: 230 RWGAGCIPH---VVFYNVLID--GYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCL 284
Query: 179 SGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNA 237
G E F E+ GL N + N ++D LCK A + ++ S P+
Sbjct: 285 GKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDI 344
Query: 238 HTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDE 297
TFN I G C V +A+ ++E +P +SY+ +I +C + +LL E
Sbjct: 345 ITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLME 404
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA-- 355
M +G P+VVT+ ++ L +G EA+ + EKM PD +N LI L +
Sbjct: 405 MMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHM 464
Query: 356 -------------SRVQEAVYVYQVE-------------------MPENGVAPDTSTFNT 383
VQ +VY M GV PD + N
Sbjct: 465 LPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNA 524
Query: 384 MITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVN 443
MI + G +A + M K+ C P+ T+ ++ K G + L L D +
Sbjct: 525 MIKGYCQFGMMSEAILCMSNMRKV-GCIPDEFTYTTVISGYAKQGNLNGALRWLCDMI-- 581
Query: 444 KHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQK 499
K ++ TY+ +I+G C+ + A LF M ++P T +++ + +K
Sbjct: 582 KRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKK 637
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 124/273 (45%), Gaps = 6/273 (2%)
Query: 156 LLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK 215
L+E M +GH + T ++ AG+ +A+ +++ + + N+L+ LCK
Sbjct: 402 LMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCK 461
Query: 216 EGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVIS 274
+ + A+++ E L+ + P+ + I G+ + + +A+ + M+ G P ++S
Sbjct: 462 KHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVS 521
Query: 275 YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
+ +I+ YC+ S+ + M+ GC P+ TYTTV+S AK G+ A+R M
Sbjct: 522 CNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMI 581
Query: 335 IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHH 394
KP+ ++ LI + A ++ M ++P+ T+ +I
Sbjct: 582 KRKCKPNVVTYSSLINGYCKTGDTDSAEGLF-ANMQAEALSPNVVTYTILIGSLFKKDKV 640
Query: 395 EKAFHVLEEMNKLEHCKPNVQTFHPL---LKSC 424
+A E M L HC PN T H L L SC
Sbjct: 641 LRAGLYFETM-LLNHCSPNDVTLHYLVNGLTSC 672
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 108/388 (27%), Positives = 179/388 (46%), Gaps = 9/388 (2%)
Query: 129 GYEHSSEIYEMMVD-ILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G+E + Y ++D K +D R L + + KG T ++ F G + A
Sbjct: 395 GFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQA 454
Query: 188 VRTF-DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFI 244
+ F D LG GL + N L+ LC++G + A + E+ K C P+ T+N+ I
Sbjct: 455 MAVFKDGLGK-GLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGC-KPDIWTYNLII 512
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
+G CK+ + +A I + GC P + +Y+T++ YCRQ EL++ M +QG
Sbjct: 513 NGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMT 572
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
P+V+TY T+++ L K+ EE + I + M G P+ +N +I +L + +V EAV +
Sbjct: 573 PDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDL 632
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
EM G+ PD +F T+IT F G + A+ + M K T++ ++ S
Sbjct: 633 LG-EMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIII-SA 690
Query: 425 FKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
F + +L +M K+ D TY ++I G C+ Y E I P
Sbjct: 691 FSEQLNMKMALRLFSEM-KKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIP 749
Query: 485 RYQTCRLILDEVKQKHMYDAAEKIEAVM 512
T +L+ + +H A I +M
Sbjct: 750 SLTTFGRVLNCLCVEHKVQEAVGIIHLM 777
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/385 (27%), Positives = 185/385 (48%), Gaps = 16/385 (4%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEE-MSKG---HIVTLNTIAKVMRRFSGAGQW 184
G++ Y +V+ + DQ A+ ++ + KG I+ NT+ K + + G
Sbjct: 430 GFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQ---QGLI 486
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNI 242
A++ +E+ G + + T NL+++ LCK G + A + + K CIP + T+N
Sbjct: 487 LPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIP-DIFTYNT 545
Query: 243 FIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
+ G+C+ ++D A + M G P VI+Y+T++ C+ +V E+ M +G
Sbjct: 546 LVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKG 605
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
C PN++TY T++ L S EA+ + +MK G PD F LI + + A
Sbjct: 606 CAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAY 665
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLK 422
+++ + V+ T+T+N +I+ FS + + A + EM K C P+ T+ L+
Sbjct: 666 GLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKK-NGCDPDNYTYRVLID 724
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
KTG ++ LL+++ SL TT+ V++ LC +K + A + M+ DI
Sbjct: 725 GFCKTGNVNQGYKFLLENIEKGFIPSL--TTFGRVLNCLCVEHKVQEAVGIIHLMVQKDI 782
Query: 483 TPRYQTCRLILDEVKQKHM-YDAAE 506
P T I + K+ H+ Y A E
Sbjct: 783 VP--DTVNTIFEADKKGHITYHAYE 805
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 152/325 (46%), Gaps = 11/325 (3%)
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSC 232
V+ F G + A FDE+ L + T N L+ LCK+G V + +F + LK
Sbjct: 266 VVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRG 325
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
+ PN TFNIFI G CK +D A + + G P V++Y+T+I CR+ +
Sbjct: 326 VCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAE 385
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
E L +M G PN TY +++ K G +A RI + G KPD + L+
Sbjct: 386 ECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGF 445
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
+ +A+ V++ + + G+ P +NT+I G A ++ EM + + CKP
Sbjct: 446 CQDGDPDQAMAVFKDGLGK-GLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAE-KGCKP 503
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQ---LLDDMVNKHHLSLDITTYTLVIHGLCRANKCEW 469
++ T++ ++ K G CLS L+ D + K + DI TY ++ G CR K +
Sbjct: 504 DIWTYNLIINGLCKMG----CLSDANHLIGDAITKGCIP-DIFTYNTLVDGYCRQLKLDS 558
Query: 470 AYLLFKEMIGHDITPRYQTCRLILD 494
A L M +TP T +L+
Sbjct: 559 AIELVNRMWSQGMTPDVITYNTLLN 583
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 172/372 (46%), Gaps = 20/372 (5%)
Query: 151 DQMRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLL 209
D+ R L +EM + + + T K++ G ++ R FD++ G+ N T N+
Sbjct: 277 DRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIF 336
Query: 210 LDTLCKEGKVELARSVFLELKSCIP-----PNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
+ LCKEG ++ A + L C+ P+ T+N I G C+ +RV EA+ + +M
Sbjct: 337 IQGLCKEGSLDRA----VRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMV 392
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
G P +Y++II YC++ +L + +G P+ TY ++++ + GD +
Sbjct: 393 NGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPD 452
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTM 384
+A+ + + G +P +N LI L + + A+ + EM E G PD T+N +
Sbjct: 453 QAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMN-EMAEKGCKPDIWTYNLI 511
Query: 385 ITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK 444
I G A H++ + + C P++ T++ L+ + K D + ++VN+
Sbjct: 512 INGLCKMGCLSDANHLIGDA-ITKGCIPDIFTYNTLVDGYCRQLKLDSAI-----ELVNR 565
Query: 445 ---HHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHM 501
++ D+ TY +++GLC+ K E +FK M P T I++ +
Sbjct: 566 MWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKK 625
Query: 502 YDAAEKIEAVMK 513
+ A + MK
Sbjct: 626 VNEAVDLLGEMK 637
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/402 (23%), Positives = 176/402 (43%), Gaps = 41/402 (10%)
Query: 150 MDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLL 209
++ R + + +G L T ++ G + AVR + GL + T N +
Sbjct: 312 LESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTV 371
Query: 210 LDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCK------INRV--------- 253
+ LC++ +V A ++ PN T+N I G+CK NR+
Sbjct: 372 ICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGF 431
Query: 254 --------------------DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
D+A ++ G G P +I Y+T+I+ C+Q +
Sbjct: 432 KPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQ 491
Query: 294 LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLG 353
L++EM +GC P++ TY +++ L K G +A + G PD +N L+
Sbjct: 492 LMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYC 551
Query: 354 RASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPN 413
R ++ A+ + M G+ PD T+NT++ E+ + + M + + C PN
Sbjct: 552 RQLKLDSAIELVN-RMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTE-KGCAPN 609
Query: 414 VQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLL 473
+ T++ +++S + K +E + LL +M +K L+ D+ ++ +I G C+ + AY L
Sbjct: 610 IITYNTIIESLCNSKKVNEAV-DLLGEMKSK-GLTPDVVSFGTLITGFCKVGDLDGAYGL 667
Query: 474 FKEM-IGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
F+ M +D++ T +I+ ++ A ++ + MKK
Sbjct: 668 FRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKK 709
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/404 (23%), Positives = 168/404 (41%), Gaps = 42/404 (10%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTL--NTIAKVMRRFSGAGQWED 186
G++H+ Y+ M+ LG + ++M LL EM TL + MR + G+ ++
Sbjct: 114 GFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRSNLDNTLLEGVYVEAMRFYGRKGKIQE 173
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIH 245
AV TF+ + F + + + N +++ L + G A V++ +K + + +T+ I I
Sbjct: 174 AVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIK 233
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ------ 299
+C+ R A ++ M GC ++Y T++ + + + EL DEM
Sbjct: 234 SFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCP 293
Query: 300 -----------------------------AQGCPPNVVTYTTVMSYLAKSGDFEEAIRIT 330
+G PN+ T+ + L K G + A+R+
Sbjct: 294 DVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLL 353
Query: 331 EKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSH 390
+ G +PD +N +I L R SRV EA +M G P+ T+N++I +
Sbjct: 354 GCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLH-KMVNGGFEPNDFTYNSIIDGYCK 412
Query: 391 HGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLD 450
G A +L++ + KP+ T+ L+ + G D+ ++ D + L
Sbjct: 413 KGMVVDANRILKDA-VFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGL--GKGLRPS 469
Query: 451 ITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
I Y +I GLC+ A L EM P T LI++
Sbjct: 470 IIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIIN 513
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 141/324 (43%), Gaps = 16/324 (4%)
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHG---WCKINRVD 254
G + T +L L GK ++ E++S + N +++ + + ++
Sbjct: 114 GFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRSNLD-NTLLEGVYVEAMRFYGRKGKIQ 172
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA T + M C P V SY+ I+ F++ +++ M+ + +V TYT +
Sbjct: 173 EAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRI 232
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI---YTLGRASRVQEAVYVYQVEMPE 371
++G A+R+ M ++G ++ + ++ Y G R +E EM E
Sbjct: 233 KSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFD----EMLE 288
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
+ PD +TFN ++ G ++ + +++ K C PN+ TF+ ++ K G D
Sbjct: 289 CCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVC-PNLFTFNIFIQGLCKEGSLD 347
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRL 491
+ L V++ L D+ TY VI GLCR ++ A +M+ P T
Sbjct: 348 RAVRLL--GCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNS 405
Query: 492 ILDEVKQKHMYDAAEKI--EAVMK 513
I+D +K M A +I +AV K
Sbjct: 406 IIDGYCKKGMVVDANRILKDAVFK 429
>gi|255660894|gb|ACU25616.1| pentatricopeptide repeat-containing protein [Glandularia flava]
Length = 481
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 191/388 (49%), Gaps = 14/388 (3%)
Query: 100 HYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEE 159
H LV ++H K + AL FRW +EH+ E + +++ILG+ +++ R +L +
Sbjct: 12 HELVYNVLHSSKTS-EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLD 70
Query: 160 M-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
M KG + ++ + G +++V+ F ++ G+E+ ++ N L + + G+
Sbjct: 71 MPKKGLEWDEDMWVMMIDSYGKQGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGR 130
Query: 219 VELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
+A+ F + L I P HTFN+ I G+ +V+ ++MK P V++Y+T
Sbjct: 131 YMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETXNRFFEDMKSREISPDVVTYNT 190
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+I Y R + + EM+ + P VVTYTT++ ++A+R+ E+MK G
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFG 250
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP-DTSTFNTMITMFSHHGHHEK 396
KP++ ++ L+ L A ++ EA + + EM + +AP D S F +I+ G+ +
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMSEARVILK-EMMDKYLAPTDNSIFMRLISSHCKSGNLDA 309
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK-------HHLSL 449
A VL+ M +L + L+++ K G+ D+ + +LLD ++ K L L
Sbjct: 310 AADVLKAMIRLS-VPTEAGHYGVLIENFCKVGQYDKAV-KLLDKLIEKDIILRPQSTLHL 367
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEM 477
+ + Y I LC + A L +++
Sbjct: 368 EPSAYNPXIEYLCNNGQAXKAETLVRQL 395
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 133/311 (42%), Gaps = 4/311 (1%)
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQ 257
E N ET +++ L + K+ AR + L++ K + + + + I + K V E+
Sbjct: 41 FEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKQGIVQESV 100
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
Q+M+ G + SY+ + + R+ + ++M ++G P T+ ++
Sbjct: 101 KMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGF 160
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
SG E R E MK PD +N +I R +++EA Y VEM + P
Sbjct: 161 FLSGKVETXNRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEK-YFVEMKGRNIEPT 219
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
T+ T+I + + A ++EEM KPN T+ LL K E +
Sbjct: 220 VVTYTTLIKGYVSVDQVDDALRLVEEMKGF-GIKPNAITYSTLLPGLCNAEKMSEA-RVI 277
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVK 497
L +M++K+ D + + +I C++ + A + K MI + ++++
Sbjct: 278 LKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFC 337
Query: 498 QKHMYDAAEKI 508
+ YD A K+
Sbjct: 338 KVGQYDKAVKL 348
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 126/267 (47%), Gaps = 6/267 (2%)
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
+ ++++ A+ + +M G + +I SY +Q + ++ +M+ G +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKQGIVQESVKMFQKMEELGVERTIK 116
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
+Y + + + G + A R KM G +P FN +I+ + +V+ ++ +
Sbjct: 117 SYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETXNRFFE-D 175
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M ++PD T+NTMI + E+A EM K + +P V T+ L+K
Sbjct: 176 MKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEM-KGRNIEPTVVTYTTLIKGYVSVD 234
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ D+ L +L+++M + + TY+ ++ GLC A K A ++ KEM+ + P +
Sbjct: 235 QVDDAL-RLVEEM-KGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNS 292
Query: 489 C--RLILDEVKQKHMYDAAEKIEAVMK 513
RLI K ++ AA+ ++A+++
Sbjct: 293 IFMRLISSHCKSGNLDAAADVLKAMIR 319
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 5/205 (2%)
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N T+ ++ L ++ A I M G + D + +I + G+ VQE+V ++
Sbjct: 44 NRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKQGIVQESVKMF 103
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
Q +M E GV ++N + + G + A +M E +P TF+ ++ F
Sbjct: 104 Q-KMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLS-EGIEPTRHTFNVMIWGFF 161
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
+GK E ++ +DM ++ +S D+ TY +I+G R K E A F EM G +I P
Sbjct: 162 LSGKV-ETXNRFFEDMKSRE-ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPT 219
Query: 486 YQT-CRLILDEVKQKHMYDAAEKIE 509
T LI V + DA +E
Sbjct: 220 VVTYTTLIKGYVSVDQVDDALRLVE 244
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 187/394 (47%), Gaps = 16/394 (4%)
Query: 122 RWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI----VTLNTIAKVMRR 177
+ G+C G + Y M++D L K + + EM I V +++ + R
Sbjct: 137 KMKGNCKGDVFT---YGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCR 193
Query: 178 FSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK-VELARSVFLELKSCIPPN 236
F G+ ++A+ F E+ G+ + T N L+ L + G E+ + L + P+
Sbjct: 194 F---GRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPD 250
Query: 237 AHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLD 296
A TF I I G CK +V EAQ ++ M G P +++Y+T++ C +L +
Sbjct: 251 AFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFE 310
Query: 297 EMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRAS 356
+ +G NV +Y +++ K +EA R+ E+M+ G KP + +N LI L ++
Sbjct: 311 SLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSG 370
Query: 357 RVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQT 416
RV+ A ++ VEM G ST+ ++ +GH E+A + + + K EH KPN++
Sbjct: 371 RVRTAQKLF-VEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEH-KPNIEV 428
Query: 417 FHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKE 476
F LL + GK +E Q D ++K+ L D Y ++I+GLC A L +
Sbjct: 429 FSILLDGMCRAGKLEEAWKQF--DEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQ 486
Query: 477 MIGHDITPRYQTCRLILDE-VKQKHMYDAAEKIE 509
M P T +I+ +K+ +++A + +E
Sbjct: 487 MEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLE 520
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 165/348 (47%), Gaps = 42/348 (12%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
+Y ++D L + ++ + +EM +G + T ++ S AG W++ + +
Sbjct: 183 VYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLM 242
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL------------------------- 229
G + T +L+D LCKEGKV A+ + LEL
Sbjct: 243 VDRGFSPDAFTFTILIDGLCKEGKVGEAQQI-LELMHHKGKEPDILTYNTLMNGLCLVGQ 301
Query: 230 ------------KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
I N ++NI I+G+CK ++DEA +EM+ G P ++Y+T
Sbjct: 302 LEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNT 361
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+I + C+ +L EMQ G + TY ++ L K+G EEAI + + +K
Sbjct: 362 LIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTE 421
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKA 397
KP+ F+ L+ + RA +++EA + E+ +NG+ PDT +N +I + G +A
Sbjct: 422 HKPNIEVFSILLDGMCRAGKLEEAWKQFD-EISKNGLEPDTIAYNILINGLCNKGMLSEA 480
Query: 398 FHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKH 445
+L +M + + C P+ TF+ ++++ K + E + QLL++M N++
Sbjct: 481 VKLLWQMEE-KGCLPDSITFNVIIQNLLKENEIHEAI-QLLEEMRNRN 526
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 164/349 (46%), Gaps = 8/349 (2%)
Query: 166 VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSV 225
VT+ T+ K + +G DAV+ FDE+ GL + +T +L++ LCK K LA +
Sbjct: 78 VTVTTLVKGVWMENGI---PDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKL 134
Query: 226 FLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQ 285
++K + T+ + I CK EA EM G G P V+ YS+++ CR
Sbjct: 135 HEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRF 194
Query: 286 YNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFF 345
+ E EM+ +G +V TY +++ L+++G ++E M G PD+ F
Sbjct: 195 GRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTF 254
Query: 346 NCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMN 405
LI L + +V EA + ++ M G PD T+NT++ G E A + E +
Sbjct: 255 TILIDGLCKEGKVGEAQQILEL-MHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLA 313
Query: 406 KLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRAN 465
K NV +++ L+ K K DE +L ++M K L TY +I LC++
Sbjct: 314 D-RGIKLNVFSYNILINGYCKDQKIDEAF-RLFEEMRPK-GLKPSTVTYNTLIGALCQSG 370
Query: 466 KCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEAVMK 513
+ A LF EM + T ++LD + K H+ +A + +++ K
Sbjct: 371 RVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKK 419
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 169/377 (44%), Gaps = 20/377 (5%)
Query: 41 IESYCSDGARLDHHQVLC--VDSPRLPDIDVIISKVHVG----SSEDEVFQSLKQDHVCN 94
I+S C DG + + + + LPD+ V+ S + G E + K+
Sbjct: 153 IDSLCKDGMTTEALDMFSEMIGAGILPDV-VVYSSLMDGLCRFGRLKEALEFFKEME-GR 210
Query: 95 AIQPSHYLVNKLIHRFKDD--WKSALGIFRWAGSCPGYEHSSEIYEMMVDIL---GKVRQ 149
I Y N LIH WK G+ + + +++D L GKV +
Sbjct: 211 GISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVD-RGFSPDAFTFTILIDGLCKEGKVGE 269
Query: 150 MDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNL 208
Q+ L+ K I+T NT+ M GQ EDA + F+ L G++ N + N+
Sbjct: 270 AQQILELMHHKGKEPDILTYNTL---MNGLCLVGQLEDATKLFESLADRGIKLNVFSYNI 326
Query: 209 LLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG 267
L++ CK+ K++ A +F E++ + P+ T+N I C+ RV AQ EM+ G
Sbjct: 327 LINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCG 386
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
+ +Y ++ C+ + + +L ++ PN+ ++ ++ + ++G EEA
Sbjct: 387 QFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAW 446
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITM 387
+ +++ G +PD+ +N LI L + EAV + +M E G PD+ TFN +I
Sbjct: 447 KQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLW-QMEEKGCLPDSITFNVIIQN 505
Query: 388 FSHHGHHEKAFHVLEEM 404
+A +LEEM
Sbjct: 506 LLKENEIHEAIQLLEEM 522
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 111/218 (50%), Gaps = 8/218 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++++ K +++D+ L EEM K VT NT+ + + +G+ A + F
Sbjct: 324 YNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQ---SGRVRTAQKLFV 380
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCI-PPNAHTFNIFIHGWCKIN 251
E+ T G T +LLD LCK G +E A +F +K PN F+I + G C+
Sbjct: 381 EMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAG 440
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
+++EA E+ +G P I+Y+ +I C + S+ +LL +M+ +GC P+ +T+
Sbjct: 441 KLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFN 500
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
++ L K + EAI++ E+M+ PD + L+
Sbjct: 501 VIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 538
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 103/251 (41%), Gaps = 38/251 (15%)
Query: 266 HGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG----------------------- 302
G P ++ +T+++ + +L DEM +G
Sbjct: 71 RGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGL 130
Query: 303 -----------CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYT 351
C +V TY ++ L K G EA+ + +M G PD ++ L+
Sbjct: 131 AIKLHEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDG 190
Query: 352 LGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCK 411
L R R++EA+ ++ EM G++ D T+N++I S G ++ L M
Sbjct: 191 LCRFGRLKEALEFFK-EMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVD-RGFS 248
Query: 412 PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAY 471
P+ TF L+ K GK E Q+L+ M +K DI TY +++GLC + E A
Sbjct: 249 PDAFTFTILIDGLCKEGKVGEA-QQILELMHHKGK-EPDILTYNTLMNGLCLVGQLEDAT 306
Query: 472 LLFKEMIGHDI 482
LF+ + I
Sbjct: 307 KLFESLADRGI 317
>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
Length = 991
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 179/372 (48%), Gaps = 21/372 (5%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
G + ++ Y ++ L K +++ + ALL +M K G I + T +++ +++A
Sbjct: 492 GCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNA 551
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGW 247
R F+ + GL+ + +L D LCK G+ E A S + + + + I G+
Sbjct: 552 FRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIV--RKGVALTKVYYTTLIDGF 609
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
K D A I+ M GC P +YS ++ + C+Q ++ +LD+M +G +
Sbjct: 610 SKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTI 669
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
YT ++ + + G + A R+ +M G KP + + I + + R+++A + +
Sbjct: 670 FAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLI-L 728
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK- 426
+M GVAPD T+N +I H G+ ++AF L+ M C+PN T+ LLK K
Sbjct: 729 KMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVG-ASCEPNYWTYCLLLKHLLKG 787
Query: 427 ----------TGKTD----ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
+G + + QLL+ MV KH L+ +TTY+ +I G C+A + E A L
Sbjct: 788 NLAYVRSVDTSGMWNLIELDITWQLLERMV-KHGLNPTVTTYSSLIAGFCKAGRLEEACL 846
Query: 473 LFKEMIGHDITP 484
L M G ++P
Sbjct: 847 LLDHMCGKGLSP 858
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 173/351 (49%), Gaps = 9/351 (2%)
Query: 160 MSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV 219
+ +G T+ T ++ + A +++DA+R +++ + + + + L+++L K+ ++
Sbjct: 384 VKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRL 443
Query: 220 ELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTI 278
+ A+ + E+ + + PN T+ I G+CK +VD A ++ M+ GC P +Y+++
Sbjct: 444 KEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSL 503
Query: 279 IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
+ + K LL +MQ G PNV+TYTT++ DF+ A R+ E M+ G
Sbjct: 504 MYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGL 563
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
KPD + L L +A R +EA Y + V GVA + T+I FS G+ + A
Sbjct: 564 KPDEHAYAVLTDALCKAGRAEEA-YSFIV---RKGVALTKVYYTTLIDGFSKAGNTDFAA 619
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
++E M E C P+ T+ LL + K + +E L L D ++ + I YT++I
Sbjct: 620 TLIERMID-EGCTPDSYTYSVLLHALCKQKRLNEALPIL--DQMSLRGIKCTIFAYTILI 676
Query: 459 HGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE-VKQKHMYDAAEKI 508
+ R K + A ++ EM P T + ++ K+ + DA + I
Sbjct: 677 DEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLI 727
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 175/370 (47%), Gaps = 9/370 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
+ ++ L K ++ R L + M + +V ++ T ++ +S G+ DA++ + +
Sbjct: 291 FTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELME 350
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDE 255
G + T N L+ LC + E + +K P TF I+G+C + D+
Sbjct: 351 KNGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDD 410
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
A +M C + + +I S ++ + ELL+E+ A G PNV+TYT+++
Sbjct: 411 ALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIID 470
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
KSG + A+ + + M+ G +P++ +N L+Y L + ++ +A+ + +M ++G+
Sbjct: 471 GYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALL-TKMQKDGII 529
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS 435
P+ T+ T++ + AF + E M + KP+ + L + K G+ +E S
Sbjct: 530 PNVITYTTLLQGQCDEHDFDNAFRLFEMMEQ-NGLKPDEHAYAVLTDALCKAGRAEEAYS 588
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE 495
+ + ++L YT +I G +A ++A L + MI TP T ++L
Sbjct: 589 -----FIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHA 643
Query: 496 V-KQKHMYDA 504
+ KQK + +A
Sbjct: 644 LCKQKRLNEA 653
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 110/457 (24%), Positives = 189/457 (41%), Gaps = 62/457 (13%)
Query: 116 SALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM------SKGHIVTLN 169
+AL F W G+ H+++ + ++ +L + R Q L+ M ++ V+ +
Sbjct: 72 TALAFFEWLARRDGFRHTADSHAALLHLLSRRRAPAQYERLVVSMLNCSDTAEDMRVSAD 131
Query: 170 TIAKV------------------MRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLD 211
I + +R + E R + +L GL +T T N ++
Sbjct: 132 AIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIK 191
Query: 212 TLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHP 270
+ CKEG + A F L L+ + P T N + G+C+ + +A W M GC
Sbjct: 192 SYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQR 251
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRIT 330
SY+ +IQ C K L M+ GC PNV +T ++S L KSG +A +
Sbjct: 252 NEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLF 311
Query: 331 EKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMI----- 385
+ M G P +N +I + R+ +A+ + ++ M +NG PD T+NT+I
Sbjct: 312 DAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKEL-MEKNGCHPDDWTYNTLIYGLCD 370
Query: 386 --------------------------TMFSHHGHHEKAFHVLEEMNKL--EHCKPNVQTF 417
+ + + EK L NK+ CK ++Q F
Sbjct: 371 QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVF 430
Query: 418 HPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
L+ S K + E +LL++ ++ + L ++ TYT +I G C++ K + A + K M
Sbjct: 431 GKLINSLIKKDRLKEA-KELLNE-ISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMM 488
Query: 478 IGHDITPRYQTCR-LILDEVKQKHMYDAAEKIEAVMK 513
P T L+ VK K ++ A + + K
Sbjct: 489 ERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQK 525
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 154/346 (44%), Gaps = 29/346 (8%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++D K D L+E M +G T + ++ + +A+ D++
Sbjct: 602 YTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMS 661
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCI-PPNAHTFNIFIHGWCKINRVD 254
G++ +L+D + +EGK + A+ ++ E+ S P+A T+ +FI+ +CK R++
Sbjct: 662 LRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLE 721
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
+A+ I +M+ G P V++Y+ +I + + L M C PN TY ++
Sbjct: 722 DAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLL 781
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV--EMPEN 372
+L K + V S S +N + E +Q+ M ++
Sbjct: 782 KHLLKG-----------NLAYVRSVDTSGMWNLI-----------ELDITWQLLERMVKH 819
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
G+ P +T++++I F G E+A +L+ M + PN + L+K C T ++
Sbjct: 820 GLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCG-KGLSPNEDIYTLLIKCCCDTKFFEK 878
Query: 433 CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
LS + ++++ + +Y L++ GLC E LF +++
Sbjct: 879 ALSFV--SIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLL 922
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 102/260 (39%), Gaps = 44/260 (16%)
Query: 259 TIQEMKGHGCHPCVIS---YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
IQ ++ G +S Y+ ++S R + + ++ G P+ VTY T++
Sbjct: 132 AIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIK 191
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
K GD A R + G +P++ N L+ R +++A +++ + MP G
Sbjct: 192 SYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLF-LMMPLMGCQ 250
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS 435
+ ++ +I KA VL M K + C PNV+ F
Sbjct: 251 RNEYSYTILIQGLCDAKCVRKAL-VLFLMMKRDGCSPNVRAF------------------ 291
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCR-LILD 494
T +I GLC++ + A LLF M + + P T +I+
Sbjct: 292 -------------------TFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVG 332
Query: 495 EVKQKHMYDAAEKIEAVMKK 514
K M DA KI+ +M+K
Sbjct: 333 YSKLGRMNDAL-KIKELMEK 351
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 115/302 (38%), Gaps = 61/302 (20%)
Query: 27 SSSENCSHIVSSSPIESYCSDGARLDHHQVLCVDSPR---LPDI---DVIISKVHVGSSE 80
SS S + I SYC +G RL+ + L + R PD+ +++I
Sbjct: 697 SSGHKPSATTYTVFINSYCKEG-RLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYI 755
Query: 81 DEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMM 140
D F +LK+ V + +P+++ L+ K L R +S ++ ++
Sbjct: 756 DRAFSTLKR-MVGASCEPNYWTYCLLLKHL---LKGNLAYVRSV-------DTSGMWNLI 804
Query: 141 VDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGL 199
++D LLE M K G T+ T + ++ F AG+ E+A
Sbjct: 805 --------ELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEAC----------- 845
Query: 200 EKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWT 259
LLLD +C +G + PN + + I C ++A
Sbjct: 846 --------LLLDHMCGKG---------------LSPNEDIYTLLIKCCCDTKFFEKALSF 882
Query: 260 IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK 319
+ M G P + SY ++ C + +F KV L ++ G + V + + L K
Sbjct: 883 VSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLK 942
Query: 320 SG 321
+G
Sbjct: 943 AG 944
>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
Length = 698
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 112/456 (24%), Positives = 206/456 (45%), Gaps = 16/456 (3%)
Query: 65 PDI---DVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIF 121
PD+ +V+I+ + +E F +++ + PS N ++H K +
Sbjct: 152 PDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMD 211
Query: 122 RWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSG 180
+ S+ + ++++ L K M Q +L +E + G + ++T ++ +
Sbjct: 212 HFEAVRRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAK 271
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAH 238
+ ++AV +++ G T N LL+ LCK G++E A + ++ C P +
Sbjct: 272 NKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTP-DVV 330
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
T+ I G K R EA +EM G + Y+ +I+ + + + M
Sbjct: 331 TYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTM 390
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRV 358
+ GC P+VVT +T++ L+K+G A+RI + M+ G P+ ++ LI+ L +A ++
Sbjct: 391 TSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKM 450
Query: 359 QEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFH 418
A+ + +M + PDT T+N +I G E A +EM + CKP+V T++
Sbjct: 451 DCALEML-AQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLE-AGCKPDVYTYN 508
Query: 419 PLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
L+ K G TD +LDDM + + Y+ ++ GLC++ K E +LF EM
Sbjct: 509 ILISGLCKAGNTDAACG-VLDDMSSSRFV------YSSLVDGLCKSGKLEGGCMLFHEME 561
Query: 479 GHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
+ RLI K + +A A+ K+
Sbjct: 562 RSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKE 597
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 180/380 (47%), Gaps = 6/380 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLE-EMSKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G++HS ++D+ + ++ + LL+ E++ + T ++ + A + E+A
Sbjct: 114 GFQHSVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEA 173
Query: 188 VRTFDELG-TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHG 246
E+ FG+ + +T NL+L LCK GKV A F ++ +P +A TF+I I+G
Sbjct: 174 FAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVRRSMPVSAATFSILING 233
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
K + +A QE +GC + +Y+ I+ + + L++++ A GC P
Sbjct: 234 LVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPT 293
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
+ TY +++ L K G EEAI + K+ G PD + LI LG+ R EA +++
Sbjct: 294 IATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFK 353
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
EM G+A DT + +I G +A V + M C P+V T ++ K
Sbjct: 354 -EMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTS-HGCVPDVVTLSTMIDGLSK 411
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
G+ + ++ M L+ + Y+ +IHGLC+A K + A + +M TP
Sbjct: 412 AGRIGAAV-RIFKSM-EARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDT 469
Query: 487 QTCRLILDEVKQKHMYDAAE 506
T +++D + + +AA
Sbjct: 470 ITYNILIDGLCKSGDVEAAR 489
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 165/351 (47%), Gaps = 16/351 (4%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++D LGK ++ + L +EM S+G + ++R G+ A + +
Sbjct: 332 YTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMT 391
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVD 254
+ G + T++ ++D L K G++ A +F +++ + PN ++ IHG CK ++D
Sbjct: 392 SHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMD 451
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
A + +MK C P I+Y+ +I C+ + DEM GC P+V TY ++
Sbjct: 452 CALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILI 511
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRF-FNCLIYTLGRASRVQEAVYVYQVEMPENG 373
S L K+G+ + A + + M SRF ++ L+ L ++ +++ ++ EM +G
Sbjct: 512 SGLCKAGNTDAACGVLDDMS------SSRFVYSSLVDGLCKSGKLEGGCMLFH-EMERSG 564
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
VA ++ T +I ++A + + K P+ ++ ++ + K+GK +E
Sbjct: 565 VA-NSQTRTRLIFHLCKANRVDEAVSLFNAIRK--EGMPHPYAYNSIISALIKSGKVNEG 621
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
+ +M D TY +++G+ AN+ + A+ + EM G P
Sbjct: 622 -QAVYQEMT--RWWKPDRVTYNALLNGMIGANRMDRAHYYYLEMTGRGYVP 669
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 150/316 (47%), Gaps = 11/316 (3%)
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVFL-ELKSCIPPNAHTFNIFIHGWCKINRVDE 255
FG + + T N LLD + + A ++ EL + P+ T+N+ I G+C +E
Sbjct: 113 FGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEE 172
Query: 256 AQWTIQEMK-GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA--QGCPPNVVTYTT 312
A I+EM+ G P + +++ ++ C+ KV +D +A + P + T++
Sbjct: 173 AFAVIREMEEDFGVAPSLKTHNLVLHGLCKS---GKVLAAMDHFEAVRRSMPVSAATFSI 229
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN 372
+++ L K+G +A + ++ G D + ++ L + ++QEAV + + ++ N
Sbjct: 230 LINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALME-KITAN 288
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
G P +T+N ++ G E+A +L ++ C P+V T+ L+ K ++ E
Sbjct: 289 GCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVD-NGCTPDVVTYTSLIDGLGKEKRSFE 347
Query: 433 CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLI 492
+L +M ++ L+LD YT +I GL + K A ++K M H P T +
Sbjct: 348 AY-KLFKEMASRG-LALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTM 405
Query: 493 LDEVKQKHMYDAAEKI 508
+D + + AA +I
Sbjct: 406 IDGLSKAGRIGAAVRI 421
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 1/137 (0%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
+Y +VD L K +++ L EM + + T +++ A + ++AV F+ +
Sbjct: 536 VYSSLVDGLCKSGKLEGGCMLFHEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIR 595
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDE 255
G+ + N ++ L K GKV ++V+ E+ P+ T+N ++G NR+D
Sbjct: 596 KEGM-PHPYAYNSIISALIKSGKVNEGQAVYQEMTRWWKPDRVTYNALLNGMIGANRMDR 654
Query: 256 AQWTIQEMKGHGCHPCV 272
A + EM G G P V
Sbjct: 655 AHYYYLEMTGRGYVPPV 671
>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
Length = 1114
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 102/406 (25%), Positives = 176/406 (43%), Gaps = 47/406 (11%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQW 184
G+ S + Y ++ LGK R ++ + LL+EM K ++ T +V+ R AG+
Sbjct: 220 GFRPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGR---AGKI 276
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCI----------- 233
+A + G + T +L+D LC K++ A+ VF ++K+
Sbjct: 277 NEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITL 336
Query: 234 -------------------------PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGC 268
P+ TF I + CK EA + M+ G
Sbjct: 337 LDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGI 396
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
P + +Y+T+I R + E+ D M++ G P TY + Y KSGD A+
Sbjct: 397 LPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALE 456
Query: 329 ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF 388
EKMK G P+ N +Y+L +A R +EA ++ + + G+ PD+ T+N M+ +
Sbjct: 457 TFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFY-GLKDIGLVPDSVTYNMMMKCY 515
Query: 389 SHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
S G ++A +L EM + C+P+V + L+ + +K + DE + + + L
Sbjct: 516 SKVGEIDEAIKLLSEMVE-NCCEPDVIVVNSLINTLYKADRVDEAWKMFM--RMKEMKLK 572
Query: 449 LDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
+ TY ++ GL + K + A LF+ M+ P T + D
Sbjct: 573 PTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFD 618
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 142/278 (51%), Gaps = 6/278 (2%)
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
+ P T+N+ I G + + ++ AQ ++K GC P V +Y+ ++ +Y + +++
Sbjct: 783 VQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELF 842
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI-TEKMKIVGSKPDSRFFNCLIYT 351
E+ EM A C PN +T+ V+S L K+G+ ++A+ + + M P + + LI
Sbjct: 843 EIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDG 902
Query: 352 LGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCK 411
L ++ R+ EA +++ M + G P+ + +N +I F G + A + + M K E +
Sbjct: 903 LSKSGRLYEAKQLFE-GMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVK-EGVR 960
Query: 412 PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAY 471
P+++T+ L+ G+ DE L + + + L+ D+ Y L+I+GL + ++ E A
Sbjct: 961 PDLKTYSVLVDCLCMVGRVDEGLHYFRE--LKESGLNPDVVCYNLIINGLGKFHRLEEAL 1018
Query: 472 LLFKEM-IGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+LF EM ITP T ++ + M + A KI
Sbjct: 1019 VLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKI 1056
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 139/295 (47%), Gaps = 7/295 (2%)
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS--CIPPNAHTFNIFIHGWCKINRVD 254
G++ T NLL+ L + +E+A+ VFL++K+ CI P+ T+N + + K ++D
Sbjct: 781 LGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCI-PDVATYNFLLDAYGKSGKID 839
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYEL-LDEMQAQGCPPNVVTYTTV 313
E +EM H C P I+++ +I + N +L D M + P TY +
Sbjct: 840 ELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPL 899
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
+ L+KSG EA ++ E M G +P+ +N LI G+A A +++ M + G
Sbjct: 900 IDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFK-RMVKEG 958
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
V PD T++ ++ G ++ H E+ K P+V ++ ++ K + +E
Sbjct: 959 VRPDLKTYSVLVDCLCMVGRVDEGLHYFREL-KESGLNPDVVCYNLIINGLGKFHRLEEA 1017
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
L L ++M ++ D+ TY +I L A E A ++ E+ + P T
Sbjct: 1018 LV-LFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFT 1071
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 137/293 (46%), Gaps = 7/293 (2%)
Query: 143 ILGKVRQMDQMR----ALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
++G + + D + L+ + G I + T ++ + +G+ ++ + E+
Sbjct: 793 LIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHE 852
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLELKSC--IPPNAHTFNIFIHGWCKINRVDEA 256
E NT T N+++ L K G V+ A ++ +L S P A T+ I G K R+ EA
Sbjct: 853 CEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEA 912
Query: 257 QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSY 316
+ + M +GC P Y+ +I + + L M +G P++ TY+ ++
Sbjct: 913 KQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDC 972
Query: 317 LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
L G +E + ++K G PD +N +I LG+ R++EA+ ++ G+ P
Sbjct: 973 LCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITP 1032
Query: 377 DTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
D T+N++I G E+A + E+ + +PNV TF+ L++ +GK
Sbjct: 1033 DLYTYNSLILNLGIAGMVEEAGKIYNEIQR-AGLEPNVFTFNALIRGYSLSGK 1084
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 151/340 (44%), Gaps = 9/340 (2%)
Query: 154 RALLEEMSK--GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLD 211
R L E+ +K G L T ++ A E A F ++ G + T N LLD
Sbjct: 771 RMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLD 830
Query: 212 TLCKEGKVELARSVFLELKS--CIPPNAHTFNIFIHGWCKINRVDEA-QWTIQEMKGHGC 268
K GK++ ++ E+ + C PN T NI I G K VD+A M
Sbjct: 831 AYGKSGKIDELFEIYKEMSAHEC-EPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDF 889
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
P +Y +I + + +L + M GC PN Y +++ K+G+ + A
Sbjct: 890 SPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACA 949
Query: 329 ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF 388
+ ++M G +PD + ++ L+ L RV E ++ ++ E+ E+G+ PD +N +I
Sbjct: 950 LFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFR-ELKESGLNPDVVCYNLIINGL 1008
Query: 389 SHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
E+A + EM K P++ T++ L+ + G +E + + + + + L
Sbjct: 1009 GKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEE--AGKIYNEIQRAGLE 1066
Query: 449 LDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
++ T+ +I G + K E AY +++ M+ +P T
Sbjct: 1067 PNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGT 1106
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 107/431 (24%), Positives = 197/431 (45%), Gaps = 33/431 (7%)
Query: 95 AIQPSHYLVNKLI------HRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVR 148
I P+ + N LI HR D AL IF S G + ++ Y + +D GK
Sbjct: 395 GILPNLHTYNTLICGLLRVHRLDD----ALEIFDNMESL-GVKPTAYTYIVFIDYYGK-- 447
Query: 149 QMDQMRAL--LEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTET 205
D + AL E+M +KG + + + AG+ +A + F L GL ++ T
Sbjct: 448 SGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVT 507
Query: 206 MNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
N+++ K G+++ A + E+ ++C P+ N I+ K +RVDEA MK
Sbjct: 508 YNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMK 567
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
P V++Y+T++ + + EL + M +GCPPN +T+ T+ L K+ +
Sbjct: 568 EMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVT 627
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV-YVYQVEMPENGVAPDTSTFNT 383
A+++ KM +G PD +N +I+ L + +V+EA+ + +Q+ + V PD T T
Sbjct: 628 LALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM---KKLVYPDFVTLCT 684
Query: 384 MITMFSHHGHHEKAFHVLEEMNKLEHC--KPNVQTFHPLLKSCFKTGKTDECLS---QLL 438
++ G E A+ ++ N L C +P + L+ S D +S +L+
Sbjct: 685 LLPGVVKAGLIEDAYKIIA--NFLYSCADQPANLFWEDLMGSILAEAGIDNAVSFSERLV 742
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH-DITPRYQTCRLILDEVK 497
+ + + S+ + +I + N A +LF++ + P+ T L++ +
Sbjct: 743 ANGICRDGDSILVP----IIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLL 798
Query: 498 QKHMYDAAEKI 508
+ M + A+ +
Sbjct: 799 EADMIEIAQDV 809
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 168/390 (43%), Gaps = 8/390 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQ-MDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G+ ++ Y ++ +L K R + M + G +L T + +M E
Sbjct: 185 GFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIESV 244
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIH 245
+ E+ T GL+ N T + + L + GK+ A + ++ + C P+ T+ + I
Sbjct: 245 MGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGC-GPDVVTYTVLID 303
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
C ++D A+ +MK P ++Y T++ + + V + EM+ G P
Sbjct: 304 ALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVP 363
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
+VVT+T ++ L K+G+F EA + M+ G P+ +N LI L R R+ +A+ ++
Sbjct: 364 DVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIF 423
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
M GV P T+ I + G A E+M K + PN+ + L S
Sbjct: 424 D-NMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKM-KTKGIAPNIVACNASLYSLA 481
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
K G+ E Q+ + L D TY +++ + + + A L EM+ + P
Sbjct: 482 KAGRDREA-KQIFYGL-KDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPD 539
Query: 486 YQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
+++ + + D A K+ MK++
Sbjct: 540 VIVVNSLINTLYKADRVDEAWKMFMRMKEM 569
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 141/314 (44%), Gaps = 5/314 (1%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTF 240
G+ E+ FD + ++++T T + L +G + A +++ NA+++
Sbjct: 134 GKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKMREFGFVLNAYSY 193
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
N IH K EA + M G P + +YS+++ ++ + V LL EM+
Sbjct: 194 NGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEMET 253
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
G PNV T+T + L ++G EA I ++M G PD + LI L A ++
Sbjct: 254 LGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDC 313
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
A V+ +M PD T+ T++ FS + + EM K H P+V TF L
Sbjct: 314 AKEVF-AKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHV-PDVVTFTIL 371
Query: 421 LKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH 480
+ + K G E ++L D++ + ++ TY +I GL R ++ + A +F M
Sbjct: 372 VDALCKAGNFGEAFAKL--DVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESL 429
Query: 481 DITPRYQTCRLILD 494
+ P T + +D
Sbjct: 430 GVKPTAYTYIVFID 443
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 144/322 (44%), Gaps = 5/322 (1%)
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRV 253
G L TET N +L+ L +GK+E VF L K I + +T+ +
Sbjct: 112 GNSNLVHTTETCNYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGL 171
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
+A + +++M+ G SY+ +I + ++ E+ M G P++ TY+++
Sbjct: 172 RQAPFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSL 231
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
M L K D E + + ++M+ +G KP+ F I LGRA ++ EA + + M + G
Sbjct: 232 MVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILK-RMDDEG 290
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
PD T+ +I + A V +M H KP+ T+ LL F + +
Sbjct: 291 CGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRH-KPDRVTYITLLDR-FSDNRDLDS 348
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
++Q +M H+ D+ T+T+++ LC+A A+ M I P T ++
Sbjct: 349 VNQFWSEMEKDGHVP-DVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLI 407
Query: 494 DEVKQKHMYDAAEKIEAVMKKL 515
+ + H D A +I M+ L
Sbjct: 408 CGLLRVHRLDDALEIFDNMESL 429
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 112/217 (51%), Gaps = 3/217 (1%)
Query: 170 TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL 229
T ++ S +G+ +A + F+ + +G N N+L++ K G+ + A ++F +
Sbjct: 895 TYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRM 954
Query: 230 -KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
K + P+ T+++ + C + RVDE +E+K G +P V+ Y+ II + +
Sbjct: 955 VKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRL 1014
Query: 289 SKVYELLDEMQ-AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNC 347
+ L +EM+ ++G P++ TY +++ L +G EEA +I +++ G +P+ FN
Sbjct: 1015 EEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNA 1074
Query: 348 LIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTM 384
LI + + + A VYQ M G +P+T T+ +
Sbjct: 1075 LIRGYSLSGKPEHAYAVYQT-MVTGGFSPNTGTYEQL 1110
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 113/251 (45%), Gaps = 3/251 (1%)
Query: 264 KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF 323
K G P + +Y+ +I ++ +++ GC P+V TY ++ KSG
Sbjct: 779 KDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKI 838
Query: 324 EEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNT 383
+E I ++M +P++ N +I L +A V +A+ +Y M + +P T+
Sbjct: 839 DELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGP 898
Query: 384 MITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVN 443
+I S G +A + E M+ C+PN ++ L+ K G+ D + L MV
Sbjct: 899 LIDGLSKSGRLYEAKQLFEGMSDY-GCRPNCAIYNILINGFGKAGEADAACA-LFKRMV- 955
Query: 444 KHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYD 503
K + D+ TY++++ LC + + F+E+ + P LI++ + + H +
Sbjct: 956 KEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLE 1015
Query: 504 AAEKIEAVMKK 514
A + MKK
Sbjct: 1016 EALVLFNEMKK 1026
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 94/216 (43%), Gaps = 36/216 (16%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAV 188
G + IY ++++ GK + D AL + M K
Sbjct: 923 GCRPNCAIYNILINGFGKAGEADAACALFKRMVKE------------------------- 957
Query: 189 RTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGW 247
G+ + +T ++L+D LC G+V+ F ELK S + P+ +N+ I+G
Sbjct: 958 ---------GVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGL 1008
Query: 248 CKINRVDEAQWTIQEM-KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
K +R++EA EM K G P + +Y+++I + + ++ +E+Q G PN
Sbjct: 1009 GKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPN 1068
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDS 342
V T+ ++ + SG E A + + M G P++
Sbjct: 1069 VFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNT 1104
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 3/107 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVT--LNTIAKVMRRFSGAGQWEDAVRTFDEL 194
Y ++++ LGK ++++ L EM K +T L T ++ AG E+A + ++E+
Sbjct: 1001 YNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEI 1060
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTF 240
GLE N T N L+ GK E A +V+ + PN T+
Sbjct: 1061 QRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1107
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 169/368 (45%), Gaps = 6/368 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAV 188
GY S Y ++ L R L + G + T ++R G+ E+AV
Sbjct: 113 GYAPSVPAYNAVLLALSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAV 172
Query: 189 RTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSV--FLELKSCIPPNAHTFNIFIHG 246
++ G N T N L+ C+ G+++ A V + + PN TFN ++G
Sbjct: 173 GVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNG 232
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
CK R++ A+ EM G P V+SY+T++ YC+ + + EM +G P+
Sbjct: 233 LCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPD 292
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
VVT+T+++ K+G+ E+A+ + +M+ G + + F LI + + +A+ +
Sbjct: 293 VVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVE 352
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
EM + G+ P +N +I + G + A ++ EM + + KP+V T+ ++ K
Sbjct: 353 -EMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREM-EAKRVKPDVVTYSTIISGYCK 410
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
G D QL M+ K L D TY+ +I GLC + A LF+ M+ + P
Sbjct: 411 VGNLDSAF-QLNQKMLKKGVLP-DAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDE 468
Query: 487 QTCRLILD 494
T ++D
Sbjct: 469 FTYTTLID 476
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 182/401 (45%), Gaps = 58/401 (14%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK----GHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
+ MV+ L K +M+ R + +EM + +V+ NT+ + + G +++ F
Sbjct: 226 FNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTL---LSGYCKVGCLHESLAVFS 282
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKIN 251
E+ GL + T L+ CK G +E A ++ +++ + N TF I G+CK
Sbjct: 283 EMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKG 342
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
+D+A ++EM+ G P V+ Y+ +I YC+ EL+ EM+A+ P+VVTY+
Sbjct: 343 FLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYS 402
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
T++S K G+ + A ++ +KM G PD+ ++ LI L R+ +A +++ M +
Sbjct: 403 TIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFE-NMLQ 461
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
GV PD T+ T+I G+ EKA + +EM + + P+V T+ L+ K+ +T
Sbjct: 462 LGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIR-KGVLPDVVTYSVLINGLSKSARTK 520
Query: 432 E------------------------------------------CLSQLLD--DMVNKHHL 447
E C+ L+ D V + L
Sbjct: 521 EAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSML 580
Query: 448 S----LDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
LD + Y+++IHG CR A K+M+ +P
Sbjct: 581 DRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSP 621
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 188/382 (49%), Gaps = 21/382 (5%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKG----HIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++V L ++++ ++ +M + VT NT+ F AG+ + A R
Sbjct: 155 YNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAA---FCRAGELDGAERVVS 211
Query: 193 ELGTFGLEK-NTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKI 250
+ G K N T N +++ LCK G++E AR VF E+ + + P+ ++N + G+CK+
Sbjct: 212 LMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKV 271
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
+ E+ EM G P V++++++I + C+ N + L+ +M+ +G N VT+
Sbjct: 272 GCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTF 331
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIY---TLGRASRVQEAVYVYQV 367
T ++ K G ++A+ E+M+ G +P +N LI LGR +E +
Sbjct: 332 TALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIR---- 387
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS-CFK 426
EM V PD T++T+I+ + G+ + AF + ++M K + P+ T+ L++ C +
Sbjct: 388 EMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLK-KGVLPDAITYSSLIRGLCEE 446
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
D C +L ++M+ + + D TYT +I G C+ E A L EMI + P
Sbjct: 447 KRLNDAC--ELFENML-QLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDV 503
Query: 487 QTCRLILDEVKQKHMYDAAEKI 508
T ++++ + + A ++
Sbjct: 504 VTYSVLINGLSKSARTKEAHRL 525
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 143/287 (49%), Gaps = 5/287 (1%)
Query: 229 LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
L+ + PN +T+NI + C R++EA + +M+G GC P ++Y+T++ ++CR
Sbjct: 144 LRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGEL 203
Query: 289 SKVYELLDEMQAQG-CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNC 347
++ M+ +G PN+VT+ ++++ L K+G E A ++ ++M G PD +N
Sbjct: 204 DGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNT 263
Query: 348 LIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKL 407
L+ + + E++ V+ EM + G+ PD TF ++I G+ E+A ++ +M +
Sbjct: 264 LLSGYCKVGCLHESLAVFS-EMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRE- 321
Query: 408 EHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKC 467
+ N TF L+ K G D+ L L + + K + + Y +I+G C+ +
Sbjct: 322 RGLRMNEVTFTALIDGFCKKGFLDDAL--LAVEEMRKCGIQPSVVCYNALINGYCKLGRM 379
Query: 468 EWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
+ A L +EM + P T I+ + D+A ++ M K
Sbjct: 380 DLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLK 426
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 111/266 (41%), Gaps = 4/266 (1%)
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
F+ I + + R A + G P V +Y+ ++ + + L M
Sbjct: 86 FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVLLAL-SDASLPSARRFLSSML 144
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
G PNV TY ++ L G EEA+ + M+ G P++ +N L+ RA +
Sbjct: 145 RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELD 204
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
A V + E P+ TFN+M+ G E A V +EM + E P+V +++
Sbjct: 205 GAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVR-EGLAPDVVSYNT 263
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
LL K G E L+ + + + L D+ T+T +IH C+A E A L +M
Sbjct: 264 LLSGYCKVGCLHESLAVFSE--MTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRE 321
Query: 480 HDITPRYQTCRLILDEVKQKHMYDAA 505
+ T ++D +K D A
Sbjct: 322 RGLRMNEVTFTALIDGFCKKGFLDDA 347
>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
Length = 991
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 179/372 (48%), Gaps = 21/372 (5%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
G + ++ Y ++ L K +++ + ALL +M K G I + T +++ +++A
Sbjct: 492 GCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNA 551
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGW 247
R F+ + GL+ + +L D LCK G+ E A S + + + + I G+
Sbjct: 552 FRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIV--RKGVALTKVYYTTLIDGF 609
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
K D A I+ M GC P +YS ++ + C+Q ++ +LD+M +G +
Sbjct: 610 SKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTI 669
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
YT ++ + + G + A R+ +M G KP + + I + + R+++A + +
Sbjct: 670 FAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLI-L 728
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK- 426
+M GVAPD T+N +I H G+ ++AF L+ M C+PN T+ LLK K
Sbjct: 729 KMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVG-ASCEPNYWTYCLLLKHLLKG 787
Query: 427 ----------TGKTD----ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
+G + + QLL+ MV KH L+ +TTY+ +I G C+A + E A L
Sbjct: 788 NLAYVRSVDTSGMWNLIELDITWQLLERMV-KHGLNPTVTTYSSLIAGFCKAGRLEEACL 846
Query: 473 LFKEMIGHDITP 484
L M G ++P
Sbjct: 847 LLDHMCGKGLSP 858
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 173/351 (49%), Gaps = 9/351 (2%)
Query: 160 MSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV 219
+ +G T+ T ++ + A +++DA+R +++ + + + + L+++L K+ ++
Sbjct: 384 VKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRL 443
Query: 220 ELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTI 278
+ A+ + E+ + + PN T+ I G+CK +VD A ++ M+ GC P +Y+++
Sbjct: 444 KEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSL 503
Query: 279 IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
+ + K LL +MQ G PNV+TYTT++ DF+ A R+ E M+ G
Sbjct: 504 MYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGL 563
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
KPD + L L +A R +EA Y + V GVA + T+I FS G+ + A
Sbjct: 564 KPDEHAYAVLTDALCKAGRAEEA-YSFIV---RKGVALTKVYYTTLIDGFSKAGNTDFAA 619
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
++E M E C P+ T+ LL + K + +E L L D ++ + I YT++I
Sbjct: 620 TLIERMID-EGCTPDSYTYSVLLHALCKQKRLNEALPIL--DQMSLRGIKCTIFAYTILI 676
Query: 459 HGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE-VKQKHMYDAAEKI 508
+ R K + A ++ EM P T + ++ K+ + DA + I
Sbjct: 677 DEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLI 727
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 175/370 (47%), Gaps = 9/370 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
+ ++ L K ++ R L + M + +V ++ T ++ +S G+ DA++ + +
Sbjct: 291 FTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELME 350
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDE 255
G + T N L+ LC + E + +K P TF I+G+C + D+
Sbjct: 351 KNGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDD 410
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
A +M C + + +I S ++ + ELL+E+ A G PNV+TYT+++
Sbjct: 411 ALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIID 470
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
KSG + A+ + + M+ G +P++ +N L+Y L + ++ +A+ + +M ++G+
Sbjct: 471 GYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALL-TKMQKDGII 529
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS 435
P+ T+ T++ + AF + E M + KP+ + L + K G+ +E S
Sbjct: 530 PNVITYTTLLQGQCDEHDFDNAFRLFEMMEQ-NGLKPDEHAYAVLTDALCKAGRAEEAYS 588
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE 495
+ + ++L YT +I G +A ++A L + MI TP T ++L
Sbjct: 589 -----FIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHA 643
Query: 496 V-KQKHMYDA 504
+ KQK + +A
Sbjct: 644 LCKQKRLNEA 653
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 109/457 (23%), Positives = 189/457 (41%), Gaps = 62/457 (13%)
Query: 116 SALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM------SKGHIVTLN 169
+AL F W G+ H+++ + ++ +L + R Q L+ M ++ V+ +
Sbjct: 72 TALAFFEWLARRDGFRHTADSHAALLHLLSRRRAPAQYERLVVSMLNCSDTAEDMRVSAD 131
Query: 170 TIAKV------------------MRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLD 211
I + +R + E R + +L GL +T T N ++
Sbjct: 132 AIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIK 191
Query: 212 TLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHP 270
+ CKEG + A F L L+ + P T N + G+C+ + +A W M GC
Sbjct: 192 SYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQR 251
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRIT 330
SY+ +IQ C + L M+ GC PNV +T ++S L KSG +A +
Sbjct: 252 NEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLF 311
Query: 331 EKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMI----- 385
+ M G P +N +I + R+ +A+ + ++ M +NG PD T+NT+I
Sbjct: 312 DAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKEL-MEKNGCHPDDWTYNTLIYGLCD 370
Query: 386 --------------------------TMFSHHGHHEKAFHVLEEMNKL--EHCKPNVQTF 417
+ + + EK L NK+ CK ++Q F
Sbjct: 371 QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVF 430
Query: 418 HPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
L+ S K + E +LL++ ++ + L ++ TYT +I G C++ K + A + K M
Sbjct: 431 GKLINSLIKKDRLKEA-KELLNE-ISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMM 488
Query: 478 IGHDITPRYQTCR-LILDEVKQKHMYDAAEKIEAVMK 513
P T L+ VK K ++ A + + K
Sbjct: 489 ERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQK 525
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 154/346 (44%), Gaps = 29/346 (8%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++D K D L+E M +G T + ++ + +A+ D++
Sbjct: 602 YTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMS 661
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCI-PPNAHTFNIFIHGWCKINRVD 254
G++ +L+D + +EGK + A+ ++ E+ S P+A T+ +FI+ +CK R++
Sbjct: 662 LRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLE 721
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
+A+ I +M+ G P V++Y+ +I + + L M C PN TY ++
Sbjct: 722 DAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLL 781
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV--EMPEN 372
+L K + V S S +N + E +Q+ M ++
Sbjct: 782 KHLLKG-----------NLAYVRSVDTSGMWNLI-----------ELDITWQLLERMVKH 819
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
G+ P +T++++I F G E+A +L+ M + PN + L+K C T ++
Sbjct: 820 GLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCG-KGLSPNEDIYTLLIKCCCDTKFFEK 878
Query: 433 CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
LS + ++++ + +Y L++ GLC E LF +++
Sbjct: 879 ALSFV--SIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLL 922
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 94/206 (45%), Gaps = 6/206 (2%)
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM 369
Y + LA+ E R+ ++ G PD+ +N +I + + + A +++ +
Sbjct: 151 YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRL-L 209
Query: 370 PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
E G+ P+T T N ++ + G KA + M L C+ N ++ L++ +
Sbjct: 210 LEGGLEPETFTCNALVLGYCRTGELRKACWLFLMM-PLMGCQRNEYSYTILIQGLCEAKC 268
Query: 430 TDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTC 489
E L L M+ + S ++ +T +I GLC++ + A LLF M + + P T
Sbjct: 269 VREALVLFL--MMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTY 326
Query: 490 R-LILDEVKQKHMYDAAEKIEAVMKK 514
+I+ K M DA KI+ +M+K
Sbjct: 327 NAMIVGYSKLGRMNDAL-KIKELMEK 351
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 115/302 (38%), Gaps = 61/302 (20%)
Query: 27 SSSENCSHIVSSSPIESYCSDGARLDHHQVLCVDSPR---LPDI---DVIISKVHVGSSE 80
SS S + I SYC +G RL+ + L + R PD+ +++I
Sbjct: 697 SSGHKPSATTYTVFINSYCKEG-RLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYI 755
Query: 81 DEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMM 140
D F +LK+ V + +P+++ L+ K L R +S ++ ++
Sbjct: 756 DRAFSTLKR-MVGASCEPNYWTYCLLLKHL---LKGNLAYVRSV-------DTSGMWNLI 804
Query: 141 VDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGL 199
++D LLE M K G T+ T + ++ F AG+ E+A
Sbjct: 805 --------ELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEAC----------- 845
Query: 200 EKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWT 259
LLLD +C +G + PN + + I C ++A
Sbjct: 846 --------LLLDHMCGKG---------------LSPNEDIYTLLIKCCCDTKFFEKALSF 882
Query: 260 IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK 319
+ M G P + SY ++ C + +F KV L ++ G + V + + L K
Sbjct: 883 VSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLK 942
Query: 320 SG 321
+G
Sbjct: 943 AG 944
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 113/446 (25%), Positives = 192/446 (43%), Gaps = 43/446 (9%)
Query: 101 YLVNKLIHRFKDDW-KSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEE 159
Y N LIH + AL +++ S G + S + Y ++ LG+ ++ LLEE
Sbjct: 202 YSYNGLIHLLLPGFCNEALKVYKRMIS-EGMKPSMKTYSALMVALGRRGDTRKIMNLLEE 260
Query: 160 M-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
M S G + T +R A + +DA F E+ G + T +L+D LC GK
Sbjct: 261 MKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGK 320
Query: 219 VELARSVFLELKSC------------------------------------IPPNAHTFNI 242
++ A+ +++++++ P+ T+ I
Sbjct: 321 LDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTI 380
Query: 243 FIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
I CK VD A + M G P + +Y+T+I + + ELL+ M++ G
Sbjct: 381 LIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLG 440
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
P +Y + Y KSGD +AI E MK G P N +YTL R+ EA
Sbjct: 441 VKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAE 500
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLK 422
++ ++ + G++PD+ T+N ++ +S G +KA +L EM + C+P+V + L+
Sbjct: 501 DIFN-DLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMIS-KGCEPDVMIINSLIN 558
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
+ +K G+ D + L+ + TY +++ GL + K A LF M
Sbjct: 559 TLYKAGRVDAAWKMF--GRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGC 616
Query: 483 TPRYQTCRLILDEVKQKHMYDAAEKI 508
P T +LD + + D A K+
Sbjct: 617 PPNTITFNSLLDCLSKNDAVDLALKM 642
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 117/477 (24%), Positives = 193/477 (40%), Gaps = 81/477 (16%)
Query: 113 DWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKG----HIVTL 168
D SA F+ + H+++ M++IL + R+++ M + + M K ++ T
Sbjct: 110 DPNSAFSYFKIVSQLTNFVHTTDACNYMLEILREQRRIEDMVFVFDLMQKKVIYRNLTTY 169
Query: 169 NTIAKVMRRFSGAGQWEDAVRTFDELGTF------------------------------- 197
TI K + G G+ A+R E+G
Sbjct: 170 MTIFKALSIKGGIGRAPFALRKMTEVGFILNAYSYNGLIHLLLPGFCNEALKVYKRMISE 229
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEA 256
G++ + +T + L+ L + G ++ E+KS + PN +T+ I I + R+D+A
Sbjct: 230 GMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDA 289
Query: 257 QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSY 316
+EM GC P VI+Y+ +I + C K EL +M+A P+ VTY T+M
Sbjct: 290 WGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDK 349
Query: 317 LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
K GD E R +M++ G PD + LI L ++ V A + V M G+ P
Sbjct: 350 FGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDV-MTTKGIFP 408
Query: 377 DTSTFNTMI--------------------------TMFSH---------HGHHEKAFHVL 401
+ T+NTMI T FS+ G KA
Sbjct: 409 NLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTF 468
Query: 402 EEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHH---LSLDITTYTLVI 458
E M K P++ + L + +TG+ E +D+ N H LS D TY +++
Sbjct: 469 ETMKK-RGIMPSIAACNASLYTLAETGRISEA-----EDIFNDLHKCGLSPDSVTYNMLM 522
Query: 459 HGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
+A + + A L EMI P +++ + + DAA K+ +K L
Sbjct: 523 KCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNL 579
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 146/289 (50%), Gaps = 10/289 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKG---HIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y +++D GK ++++++ L EM S+G + +T N I + + + A+ +
Sbjct: 834 YNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVK---SNNLNKALDLYY 890
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKIN 251
EL + T L+D L K G+ E A +F E L PN+ +NI I+G+ K
Sbjct: 891 ELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSG 950
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
+D A ++M G P + SY+ +++ C + + +E++ G P+ V+Y
Sbjct: 951 EIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYN 1010
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
+++ L KS +EA+ + +MK G PD +N LI LG A +V AV +Y+ E+
Sbjct: 1011 FIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYE-ELQL 1069
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
G+ P T+N +I S G+ ++AF V ++M + C PN +TF L
Sbjct: 1070 VGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKM-MVVGCSPNTETFAQL 1117
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 152/302 (50%), Gaps = 6/302 (1%)
Query: 209 LLDTLCKEGKVELARSVFLELKS--CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
L+ LCK K A++VF + I P ++N + G N ++A ++MK
Sbjct: 766 LIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSA 825
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
G HP +Y+ ++ ++ + +K+Y+L EM+++GC PN +T+ ++S L KS + +A
Sbjct: 826 GTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKA 885
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
+ + ++ P + LI L +A R ++A+ +++ EM + G P++ +N +I
Sbjct: 886 LDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFE-EMLDYGCGPNSVIYNILIN 944
Query: 387 MFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHH 446
F G + A + ++M K E +P+++++ L++ TG+ DE + + +
Sbjct: 945 GFGKSGEIDFACELFKKMVK-EGIRPDLKSYTILVECLCITGRIDEAVQYF--EELKLTG 1001
Query: 447 LSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAE 506
L D +Y +I+GL ++ + + A LF EM I+P T ++ + D A
Sbjct: 1002 LDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAV 1061
Query: 507 KI 508
K+
Sbjct: 1062 KM 1063
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 163/352 (46%), Gaps = 7/352 (1%)
Query: 140 MVDILGKVRQMDQMRALLEEMSKGHIV--TLNTIAKVMRRFSGAGQWEDAVRTFDELGTF 197
++ +L K ++ + + ++ +K + TL + +M G+ E A+ F+++ +
Sbjct: 766 LIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSA 825
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEA 256
G N T NLLLD K ++ ++ E++S PNA T NI I K N +++A
Sbjct: 826 GTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKA 885
Query: 257 QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSY 316
E+ P +Y +I + + ++ +EM GC PN V Y +++
Sbjct: 886 LDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILING 945
Query: 317 LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
KSG+ + A + +KM G +PD + + L+ L R+ EAV ++ E+ G+ P
Sbjct: 946 FGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFE-ELKLTGLDP 1004
Query: 377 DTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQ 436
DT ++N +I ++A + EM K P++ T++ L+ GK D +
Sbjct: 1005 DTVSYNFIINGLGKSRRLDEALSLFSEM-KNRGISPDLYTYNALILHLGIAGKVDVAVK- 1062
Query: 437 LLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ + + L + TY +I G + + A+ +FK+M+ +P +T
Sbjct: 1063 -MYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTET 1113
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 100/429 (23%), Positives = 178/429 (41%), Gaps = 73/429 (17%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y M+ L K R++D+ LLE M S G T + + + +G A+ TF+ +
Sbjct: 413 YNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMK 472
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVD 254
G+ + N L TL + G++ A +F +L C + P++ T+N+ + + K ++D
Sbjct: 473 KRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQID 532
Query: 255 EAQWTIQEMKGHGCHP-----------------------------------CVISYSTII 279
+A + EM GC P V++Y+ ++
Sbjct: 533 KATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILL 592
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
++ K EL M GCPPN +T+ +++ L+K+ + A+++ +M ++
Sbjct: 593 TGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCN 652
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
PD +N +IY L R R+ A + + + ++PD T T+I HG E A
Sbjct: 653 PDVLTYNTIIYGLIREGRIDYAFWFFH--QMKKFLSPDYVTLCTLIPGVVRHGRVEDAIK 710
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS--QLL-------DDMVN------- 443
V+ E + N Q + L++ + +E +S ++L DD V
Sbjct: 711 VVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVL 770
Query: 444 -KHHLSLD-----------------ITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
K +LD + +Y ++ GL +N E A LF++M P
Sbjct: 771 CKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPN 830
Query: 486 YQTCRLILD 494
T L+LD
Sbjct: 831 NFTYNLLLD 839
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 167/367 (45%), Gaps = 18/367 (4%)
Query: 152 QMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG-LEKNTETMNLLL 210
QM+ L S ++ I V+R G+ EDA++ E L+ N++ L+
Sbjct: 680 QMKKFL---SPDYVTLCTLIPGVVRH----GRVEDAIKVVMEFVHQACLQTNSQFWGELM 732
Query: 211 DTLCKEGKVELARSVFLELKSC--IPPNAHTFNIFIHGWCKINRVDEAQWTIQEM-KGHG 267
+ + E ++E A S F E+ C + + H I CK + +AQ + K G
Sbjct: 733 ECILTEAEIEEAIS-FAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLG 791
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
HP + SY+ ++ K EL ++M++ G PN TY ++ KS +
Sbjct: 792 IHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLY 851
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITM 387
+ +M+ G +P++ N +I L +++ + +A+ +Y E+ +P T+ +I
Sbjct: 852 DLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYY-ELMSGDFSPTPCTYGPLIDG 910
Query: 388 FSHHGHHEKAFHVLEEMNKLEH-CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHH 446
G E+A + EEM L++ C PN ++ L+ K+G+ D +L MV K
Sbjct: 911 LLKAGRSEQAMKIFEEM--LDYGCGPNSVIYNILINGFGKSGEIDFA-CELFKKMV-KEG 966
Query: 447 LSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAE 506
+ D+ +YT+++ LC + + A F+E+ + P + I++ + + D A
Sbjct: 967 IRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEAL 1026
Query: 507 KIEAVMK 513
+ + MK
Sbjct: 1027 SLFSEMK 1033
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 113/233 (48%), Gaps = 5/233 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVM-RRFSGAGQWEDAVRTFDELG 195
Y ++D L K + +Q + EEM + I ++ F +G+ + A F ++
Sbjct: 904 YGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMV 963
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVD 254
G+ + ++ +L++ LC G+++ A F ELK + + P+ ++N I+G K R+D
Sbjct: 964 KEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLD 1023
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA EMK G P + +Y+ +I ++ +E+Q G P+V TY ++
Sbjct: 1024 EALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALI 1083
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE---AVYV 364
+ SG+ ++A + +KM +VG P++ F L RA V AV++
Sbjct: 1084 RGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPRAGLVHNPFGAVFI 1136
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 100/191 (52%), Gaps = 2/191 (1%)
Query: 133 SSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDAVRTF 191
+S IY ++++ GK ++D L ++M K I L + ++ G+ ++AV+ F
Sbjct: 935 NSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYF 994
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKI 250
+EL GL+ +T + N +++ L K +++ A S+F E+K+ I P+ +T+N I
Sbjct: 995 EELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIA 1054
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
+VD A +E++ G P V +Y+ +I+ + N + + + +M GC PN T+
Sbjct: 1055 GKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETF 1114
Query: 311 TTVMSYLAKSG 321
+ + ++G
Sbjct: 1115 AQLPNKYPRAG 1125
>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 96/318 (30%), Positives = 159/318 (50%), Gaps = 5/318 (1%)
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRVDE 255
GLE N T + L++ C EGK+ A +F + + PN H+++I I G C++ + E
Sbjct: 155 LGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTE 214
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
++ MK GC P V+ Y+TI+ C+ ++ + +M+ G P VVTYT+++
Sbjct: 215 VIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIH 274
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
L G ++EA + +MK PD F+ LI + + V EA + + M E GV
Sbjct: 275 GLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKT-MTEMGVE 333
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS 435
PD +T+NT++ + +A V E M + P+V +F L+ K + DE
Sbjct: 334 PDVATYNTLMNGYCLRMEVVEARKVFEVMIS-KGRMPDVFSFSILVNGYCKAKRIDEA-K 391
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE 495
QL D+M ++ L D +Y +I GLC+A + A LFK+M + P T ++LD
Sbjct: 392 QLFDEMTHR-GLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDC 450
Query: 496 VKQKHMYDAAEKIEAVMK 513
+ ++ D A + M+
Sbjct: 451 LSKQGYLDQAMGLFRAME 468
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 172/356 (48%), Gaps = 5/356 (1%)
Query: 160 MSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV 219
+++G+ +++ + +++ G+ + ++ + + G E + N ++D LCK+ V
Sbjct: 188 VARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLV 247
Query: 220 ELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTI 278
A +F ++K + I P T+ IHG + R EA + EMKG P ++++S +
Sbjct: 248 NEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVL 307
Query: 279 IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
I C++ S+ +L M G P+V TY T+M+ + EA ++ E M G
Sbjct: 308 IDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGR 367
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
PD F+ L+ +A R+ EA ++ EM G+ PDT ++NT+I+ +A
Sbjct: 368 MPDVFSFSILVNGYCKAKRIDEAKQLFD-EMTHRGLIPDTVSYNTLISGLCQARRPLEAE 426
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
+ ++M+ + PN+ T+ LL K G D+ + L M N L D+ TY ++I
Sbjct: 427 ELFKDMHSNGY-PPNLVTYSILLDCLSKQGYLDQAMG-LFRAMENSG-LKPDLVTYNIMI 483
Query: 459 HGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
G+C+ K + A LF E+ + P C +D V + + D A K M+K
Sbjct: 484 DGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEK 539
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 165/361 (45%), Gaps = 16/361 (4%)
Query: 126 SCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWE 185
S Y H + + + D L M L IV + + R ++
Sbjct: 58 SSSSYRHKNRTFRNINDALSAFNHMVNTNPL------PSIVKFGELFSALVRMK---HYK 108
Query: 186 DAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFI 244
V ++ G+ + ++ +L++ C+ V+ SV ++ K + PN TF+ I
Sbjct: 109 TVVSLSKQMEMAGISHDVLSLTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLI 168
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
+G+C ++ A M G P V SYS II+ CR ++V +LL+ M+ GC
Sbjct: 169 NGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCE 228
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
P+VV Y T++ L K EA+ I KMK G P + LI+ L R +EA +
Sbjct: 229 PDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGL 288
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS- 423
EM + PD F+ +I + G +A +L+ M ++ +P+V T++ L+
Sbjct: 289 LN-EMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEM-GVEPDVATYNTLMNGY 346
Query: 424 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
C + + ++ + M++K + D+ +++++++G C+A + + A LF EM +
Sbjct: 347 CLRMEVVEA--RKVFEVMISKGRMP-DVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLI 403
Query: 484 P 484
P
Sbjct: 404 P 404
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 177/391 (45%), Gaps = 21/391 (5%)
Query: 35 IVSSSPIESYCSDGA---RLDHHQVLCVDS--PRLPDIDVIISKVHVGSSEDEVFQSLKQ 89
I S+ I +C +G ++ V+ P + +II + EV + L+
Sbjct: 162 ITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEH 221
Query: 90 DHVCNAIQPSHYLVNKLIHRFKDD--WKSALGIF-RWAGSCPGYEHSSEIYEMMVDILGK 146
V +P + N ++ R D A+ IF + G+ G + Y ++ L
Sbjct: 222 MKVVGC-EPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGT--GILPTVVTYTSLIHGLRN 278
Query: 147 VRQMDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKN 202
+ + + LL EM G+I V + + +M + + ++T E+G +E +
Sbjct: 279 LGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMG---VEPD 335
Query: 203 TETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQ 261
T N L++ C +V AR VF + + P+ +F+I ++G+CK R+DEA+
Sbjct: 336 VATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFD 395
Query: 262 EMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSG 321
EM G P +SY+T+I C+ + EL +M + G PPN+VTY+ ++ L+K G
Sbjct: 396 EMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQG 455
Query: 322 DFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTF 381
++A+ + M+ G KPD +N +I + + + ++A ++ E+ G+ P+
Sbjct: 456 YLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELF-AELSVKGLQPNNWVC 514
Query: 382 NTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
I G ++A +M K + C P
Sbjct: 515 TPTIDGVCKGGLLDEAHKAFRQMEK-DDCSP 544
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 138/270 (51%), Gaps = 4/270 (1%)
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
+ I I+ +C++ VD + ++ G P VI++ST+I +C + + EL D M
Sbjct: 128 SLTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVM 187
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRV 358
A+G PNV +Y+ ++ L + G E I++ E MK+VG +PD +N ++ L + V
Sbjct: 188 VARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLV 247
Query: 359 QEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFH 418
EAV+++ +M G+ P T+ ++I + G ++AF +L EM K + P++ F
Sbjct: 248 NEAVHIF-CKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEM-KGGNIMPDLVAFS 305
Query: 419 PLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
L+ K G+ E ++++ + + + D+ TY +++G C + A +F+ MI
Sbjct: 306 VLIDIMCKEGEVSE--ARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMI 363
Query: 479 GHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
P + ++++ + D A+++
Sbjct: 364 SKGRMPDVFSFSILVNGYCKAKRIDEAKQL 393
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 187/383 (48%), Gaps = 12/383 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ L K + MD+ +L M K G + T ++ + +GQ ++A+ T ++
Sbjct: 239 YSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMR 298
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
+ G+E N T + L++ LCK G+ AR +F + K + P+ T+ + G+ +
Sbjct: 299 SDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALV 358
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
E + M +G P ++ +I +Y +Q + + +M+ G PNVV Y TV+
Sbjct: 359 EMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVI 418
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
L KSG ++A+ E+M G P+ + LI+ L + +A + +EM + G+
Sbjct: 419 DVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELI-LEMLDRGI 477
Query: 375 APDTSTFNTMITMFSHHGH---HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
+T FN++I G EK F ++ + KP++ T++ L+ C GK D
Sbjct: 478 CLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG----VKPDIITYNTLIDGCCLAGKMD 533
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRL 491
E ++LL MV+ + DI TY +I+G CR ++ + A LFKEM+ ++P T +
Sbjct: 534 EA-TKLLASMVSVG-VKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNI 591
Query: 492 ILDEVKQKHMYDAAEKIEAVMKK 514
IL + AA+++ + K
Sbjct: 592 ILQGLFHTRRTAAAKELYVSITK 614
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 161/354 (45%), Gaps = 39/354 (11%)
Query: 165 IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARS 224
+V+ NT V+ F G + A T+ E+ G+ + T + ++ LCK ++ A
Sbjct: 201 VVSYNT---VLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAME 257
Query: 225 VFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYC 283
V + K+ + P+ T+N +HG+C + EA T+++M+ G P V++YS+++ C
Sbjct: 258 VLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLC 317
Query: 284 RQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSR 343
+ ++ ++ D M +G P++ TY T++ A G E + + M G +PD
Sbjct: 318 KNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHH 377
Query: 344 FFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEE 403
FN LI + +V +A+ V+ +M ++G+ P+ + T+I + G + A E+
Sbjct: 378 VFNILICAYAKQEKVDQAMLVFS-KMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQ 436
Query: 404 MNKLEHCKPNVQTFHPL---LKSCFKTGKTDECLSQLLD--------------------- 439
M E PN+ + L L +C K K +E + ++LD
Sbjct: 437 MID-EGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEG 495
Query: 440 ---------DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
D++ + + DI TY +I G C A K + A L M+ + P
Sbjct: 496 RVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKP 549
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 163/344 (47%), Gaps = 17/344 (4%)
Query: 148 RQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTF----DELGTFGLEKN 202
R D M +L M++ G I + + +++ + ++A+ D+ G G +
Sbjct: 142 RTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGG-GSPPD 200
Query: 203 TETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQ 261
+ N +L+ KEG + A S + E L I P+ T++ I CK +D+A +
Sbjct: 201 VVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLN 260
Query: 262 EMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSG 321
M +G P ++Y++I+ YC + L +M++ G PNVVTY+++M+YL K+G
Sbjct: 261 TMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNG 320
Query: 322 DFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTF 381
EA +I + M G +PD + L+ + E + + M NG+ PD F
Sbjct: 321 RSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDL-MVRNGIQPDHHVF 379
Query: 382 NTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL---SQLL 438
N +I ++ ++A V +M + PNV + ++ K+G D+ + Q++
Sbjct: 380 NILICAYAKQEKVDQAMLVFSKMRQ-HGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMI 438
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
D+ L+ +I YT +IHGLC +K + A L EM+ I
Sbjct: 439 DE-----GLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGI 477
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 162/338 (47%), Gaps = 15/338 (4%)
Query: 155 ALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDA----VRTFDELGTFGLEKNTETMNLLL 210
AL + KG V T +++ + DA +R ELG + + N LL
Sbjct: 114 ALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCI---PDVFSYNNLL 170
Query: 211 DTLCKEGK----VELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
LC E + +EL + + PP+ ++N ++G+ K D+A T EM
Sbjct: 171 KGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDR 230
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
G P V++YS+II + C+ K E+L+ M G P+ +TY +++ SG +EA
Sbjct: 231 GILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEA 290
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
I +KM+ G +P+ ++ L+ L + R EA ++ M + G+ PD +T+ T++
Sbjct: 291 IGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFD-SMTKRGLEPDIATYRTLLQ 349
Query: 387 MFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHH 446
++ G + H L ++ +P+ F+ L+ + K K D+ + L+ + +H
Sbjct: 350 GYATKGALVE-MHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAM--LVFSKMRQHG 406
Query: 447 LSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
L+ ++ Y VI LC++ + A L F++MI +TP
Sbjct: 407 LNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTP 444
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 157/373 (42%), Gaps = 48/373 (12%)
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC----IPPNAHTF 240
EDA FDEL G + +N L + + A S + + + P HT+
Sbjct: 37 EDARHVFDELLRRGRGASIYGLNRALADVARHSPAA-AVSRYNRMARAGAGKVTPTVHTY 95
Query: 241 NIFIHGWCKINRV------------------------------------DEAQWTIQEMK 264
I I C+ R+ D ++ M
Sbjct: 96 AILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMT 155
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM---QAQGCPPNVVTYTTVMSYLAKSG 321
GC P V SY+ +++ C + + ELL M + G PP+VV+Y TV++ K G
Sbjct: 156 ELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEG 215
Query: 322 DFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTF 381
D ++A +M G PD ++ +I L +A + +A+ V M +NGV PD T+
Sbjct: 216 DSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNT-MVKNGVMPDCMTY 274
Query: 382 NTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDM 441
N+++ + G ++A L++M + + +PNV T+ L+ K G++ E ++ + D
Sbjct: 275 NSILHGYCSSGQPKEAIGTLKKM-RSDGVEPNVVTYSSLMNYLCKNGRSTE--ARKIFDS 331
Query: 442 VNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHM 501
+ K L DI TY ++ G + L M+ + I P + +++ ++
Sbjct: 332 MTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEK 391
Query: 502 YDAAEKIEAVMKK 514
D A + + M++
Sbjct: 392 VDQAMLVFSKMRQ 404
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 108/251 (43%), Gaps = 9/251 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++D +MD+ LL M K IVT T+ R S + +DA+ F
Sbjct: 519 YNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVS---RMDDALALFK 575
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKIN 251
E+ + G+ N T N++L L + A+ +++ + KS T+NI +HG CK N
Sbjct: 576 EMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNN 635
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
DEA Q + +++ +I + + + +L A G P+V TY+
Sbjct: 636 LTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYS 695
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYT-LGRASRVQEAVYVYQVEMP 370
+ L + G EE + M+ G DSR N ++ L R + Y++ ++
Sbjct: 696 LMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEK 755
Query: 371 ENGVAPDTSTF 381
+ T++F
Sbjct: 756 HFSLEASTASF 766
>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
gi|194700420|gb|ACF84294.1| unknown [Zea mays]
gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
Length = 598
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 157/330 (47%), Gaps = 8/330 (2%)
Query: 173 KVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC 232
+++R G+ DA R + G E T L+D C+ G +E AR V + +
Sbjct: 101 RLVRDLCRRGRPADAARVVEACGP---EATAATYGALVDGYCRAGLLEDARRVVGGMPAH 157
Query: 233 I-PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKV 291
+ +A+ N IH C+ RV +A + M GC P V++Y+ ++Q+ C+ + +
Sbjct: 158 VQASSAYAHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQA 217
Query: 292 YELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYT 351
EL+D M+A+GC PN VTY ++ + + GD ++A + + G KP++ +N ++
Sbjct: 218 LELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKG 277
Query: 352 LGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCK 411
R +A + EM P+ +T N +I G +K LE+M+K C
Sbjct: 278 FCSIERWVDADEILD-EMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSK-HGCT 335
Query: 412 PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAY 471
NV T++ ++ + G D L +LL +M DI TY V+ GLC A++ E A
Sbjct: 336 ANVVTYNAVISGMCEQGNVDSAL-ELLSNM-QSFGCKPDIVTYNTVLKGLCSADRWEDAE 393
Query: 472 LLFKEMIGHDITPRYQTCRLILDEVKQKHM 501
L +M +D P T I+ QK +
Sbjct: 394 ELMIKMSQNDRLPDNSTFNTIISFWCQKGL 423
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/397 (27%), Positives = 179/397 (45%), Gaps = 16/397 (4%)
Query: 99 SHYLVNKLIHRFKDDWKSALGIFRWAGS-CPGYEHSSEIYEMMVDILGKVRQMDQMRALL 157
S Y N LIH + + A + G C G Y +++ K R Q L+
Sbjct: 162 SAYAHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELI 221
Query: 158 E----EMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTL 213
+ E + + VT N I M R G + A + L + G + NT N +L
Sbjct: 222 DFMRAEGCEPNNVTYNVIIDAMCR---EGDVDQARELLNSLPSRGCKPNTVNYNTVLKGF 278
Query: 214 CKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCV 272
C + A + E+ + PPN T N+ I+ C+ + + +++M HGC V
Sbjct: 279 CSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANV 338
Query: 273 ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEK 332
++Y+ +I C Q N ELL MQ+ GC P++VTY TV+ L + +E+A + K
Sbjct: 339 VTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIK 398
Query: 333 MKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
M PD+ FN +I + + +A V++ +MPE G P+++T++T+I + G
Sbjct: 399 MSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFK-QMPEKGCNPNSTTYSTIIGGLTKAG 457
Query: 393 HHEKAFHVLEEM-NKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDI 451
E+A +L EM NK + + + L +S K K +E + + + +S
Sbjct: 458 KMEQALELLNEMANKGFNTD---KMYRVLTESLNKEDKIEEVVQVV--HKLQDSGISPQT 512
Query: 452 TTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
Y V+ GLCR K ++A + +M+ P T
Sbjct: 513 VLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDEST 549
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 154/340 (45%), Gaps = 8/340 (2%)
Query: 176 RRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIP- 234
RR S D +G+ + N L+ LC+ G+ A V +++C P
Sbjct: 69 RRLSALIHRGDLDAALRLVGSSPRPPDVPLANRLVRDLCRRGRPADAARV---VEACGPE 125
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYEL 294
A T+ + G+C+ +++A+ + M H +++ +I + C + + +
Sbjct: 126 ATAATYGALVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADALVV 185
Query: 295 LDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGR 354
LD M +GC P+VVTY ++ K + +A+ + + M+ G +P++ +N +I + R
Sbjct: 186 LDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCR 245
Query: 355 ASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNV 414
V +A + +P G P+T +NT++ F A +L+EM + E+C PN
Sbjct: 246 EGDVDQARELLN-SLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVR-ENCPPNE 303
Query: 415 QTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLF 474
T + ++ + + G + ++ L+ M +KH + ++ TY VI G+C + A L
Sbjct: 304 ATLNVIINTLCRKGLLQK-VTLYLEKM-SKHGCTANVVTYNAVISGMCEQGNVDSALELL 361
Query: 475 KEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
M P T +L + ++ AE++ M +
Sbjct: 362 SNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQ 401
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 149/352 (42%), Gaps = 82/352 (23%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQW 184
G E ++ Y +++D + + +DQ R LL + K + V NT V++ F +W
Sbjct: 228 GCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNT---VLKGFCSIERW 284
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS---CIPPNAHTFN 241
DA DE+ N T+N++++TLC++G ++ +++LE S C N T+N
Sbjct: 285 VDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKV-TLYLEKMSKHGCTA-NVVTYN 342
Query: 242 IFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQS-------------------- 281
I G C+ VD A + M+ GC P +++Y+T+++
Sbjct: 343 AVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQN 402
Query: 282 ---------------YCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
+C++ + +E+ +M +GC PN TY+T++ L K+G E+A
Sbjct: 403 DRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQA 462
Query: 327 ----------------------------------IRITEKMKIVGSKPDSRFFNCLIYTL 352
+++ K++ G P + +N ++ L
Sbjct: 463 LELLNEMANKGFNTDKMYRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGL 522
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
R + A+ V +M G PD ST+ +I + G+ ++A +L +
Sbjct: 523 CRNGKTDYAIDVL-ADMVSCGCMPDESTYIILIEGLFYEGYSKEARELLSRL 573
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 188/394 (47%), Gaps = 14/394 (3%)
Query: 38 SSPIESYCSDGARLDHHQVLCVD------SPRLPDIDVIISKVHVGSSEDEVFQSLKQDH 91
++PI + C D R++ + +D P + +IS V +F + +D
Sbjct: 337 TAPIVALC-DMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVSRMAIGLFHRMSRDG 395
Query: 92 VCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMD 151
V + L+N L+ + D SAL +F G ++S Y ++ + +
Sbjct: 396 VVPNTVTYNALMNVLMENMEID--SALIVFNMMGKHGCLPNTSS-YNELIRGYCTIGDTE 452
Query: 152 QMRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLL 210
+ ++L M KG TL T +++ + +G + A+R + + G + + + L+
Sbjct: 453 KAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELI 512
Query: 211 DTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCH 269
CK K+ELA +F E+ + PN T+ I G+CK ++D A ++ MK GC
Sbjct: 513 SGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCR 572
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI 329
P V +Y+ +I +Q NFS EL M + P+VVTY+TV++ L +G A+ +
Sbjct: 573 PNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEM 632
Query: 330 TEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFS 389
KM G P+ ++ LI LG+ RV+EA ++ E+ + G+ PD T+ MI +
Sbjct: 633 FNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFS-ELKKQGLIPDEVTYVKMIEVCV 691
Query: 390 HHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
G ++AF L EM C+P +QT+ L+K
Sbjct: 692 MSGKVDRAFDFLGEMIN-AGCQPTLQTYDVLIKG 724
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/429 (25%), Positives = 197/429 (45%), Gaps = 20/429 (4%)
Query: 94 NAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMD 151
+ ++P + +I + D SA IF G E ++ Y +++ L +++
Sbjct: 257 SGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDE-EGCEPNAATYSTLINGLCNSGRVN 315
Query: 152 QMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLL 210
+ + EM++ G + T++T + G+ EDA + F ++ G + N T L+
Sbjct: 316 EALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLI 375
Query: 211 DTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCH 269
+ +A +F + + + PN T+N ++ + +D A M HGC
Sbjct: 376 S---GQRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCL 432
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI 329
P SY+ +I+ YC + K +L M P +VTY ++ SGD + AIR+
Sbjct: 433 PNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRV 492
Query: 330 TEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFS 389
E MK G +PD + LI + S+++ A ++ EM + G+ P+ T+ +I+ +
Sbjct: 493 LELMKANGCQPDEWSYTELISGFCKISKMELASGMFN-EMMDRGLCPNEVTYTALISGYC 551
Query: 390 HHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK----TGKTDECLSQLLDDMVNKH 445
+ A +LE M K C+PNVQT++ L+ K +G + C L +
Sbjct: 552 KDEKLDCAARMLERM-KRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVML------EE 604
Query: 446 HLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
+S D+ TY+ VI+GLC A +F +M+ H P T ++ + Q+ + A
Sbjct: 605 KISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEA 664
Query: 506 EKIEAVMKK 514
E++ + +KK
Sbjct: 665 EEMFSELKK 673
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/399 (26%), Positives = 183/399 (45%), Gaps = 16/399 (4%)
Query: 107 IHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIV 166
+ R +D WK + + + Y ++S I V + L MS+ +V
Sbjct: 346 MGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVSRMAI--------GLFHRMSRDGVV 397
Query: 167 TLNTIA--KVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARS 224
NT+ +M + + A+ F+ +G G NT + N L+ C G E A S
Sbjct: 398 P-NTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMS 456
Query: 225 VFLELKSCIP-PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYC 283
+ + P P T+NI I G+C D A ++ MK +GC P SY+ +I +C
Sbjct: 457 MLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFC 516
Query: 284 RQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSR 343
+ + +EM +G PN VTYT ++S K + A R+ E+MK G +P+ +
Sbjct: 517 KISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQ 576
Query: 344 FFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEE 403
+N LI+ L + + A + +V M E ++PD T++T+I ++G A + +
Sbjct: 577 TYNVLIHGLTKQNNFSGAEELCKV-MLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNK 635
Query: 404 MNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCR 463
M K C PN+ T+ L+++ + G+ +E ++ + + K L D TY +I
Sbjct: 636 MVK-HGCLPNLHTYSSLIQALGQEGRVEE--AEEMFSELKKQGLIPDEVTYVKMIEVCVM 692
Query: 464 ANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMY 502
+ K + A+ EMI P QT +++ ++ + +Y
Sbjct: 693 SGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVY 731
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 156/353 (44%), Gaps = 43/353 (12%)
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEA 256
GL+ N N +++ LCK+G V A S+ ++ KS + P+ T+ I G+C+ +D A
Sbjct: 223 GLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSA 282
Query: 257 QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSY 316
M GC P +YST+I C ++ + + EM G P V T+T +
Sbjct: 283 FEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVA 342
Query: 317 LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
L G E+A +I MK G KP+ + LI + R SR+ A+ ++ M +GV P
Sbjct: 343 LCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLI-SGQRVSRM--AIGLFH-RMSRDGVVP 398
Query: 377 DTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQ 436
+T T+N ++ + + + A V M K C PN +++ L++ G T++ +S
Sbjct: 399 NTVTYNALMNVLMENMEIDSALIVFNMMGK-HGCLPNTSSYNELIRGYCTIGDTEKAMSM 457
Query: 437 LLDDMVNKHHLSLDITTYTLVIHGLC---------------RANKC---EWAYL------ 472
L + + K + + TY ++I G C +AN C EW+Y
Sbjct: 458 LTNML--KGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGF 515
Query: 473 -----------LFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
+F EM+ + P T ++ + D A ++ MK+
Sbjct: 516 CKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKR 568
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 130/285 (45%), Gaps = 7/285 (2%)
Query: 229 LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
L+ + PN +N I+ CK V +A+ I ++ G P +Y+++I YCR +
Sbjct: 220 LREGLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDL 279
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
+E+ + M +GC PN TY+T+++ L SG EA+ +M G P F
Sbjct: 280 DSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAP 339
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
I L R+++A ++ ++M + G P+ T+ ++I S A + M++ +
Sbjct: 340 IVALCDMGRIEDAWKIF-IDMKKKGCKPNVYTYTSLI---SGQRVSRMAIGLFHRMSR-D 394
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
PN T++ L+ + + D L ++ +M+ KH + ++Y +I G C E
Sbjct: 395 GVVPNTVTYNALMNVLMENMEIDSAL--IVFNMMGKHGCLPNTSSYNELIRGYCTIGDTE 452
Query: 469 WAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
A + M+ TP T +I+ D A ++ +MK
Sbjct: 453 KAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMK 497
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 95/440 (21%), Positives = 181/440 (41%), Gaps = 51/440 (11%)
Query: 61 SPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSAL-- 118
+P L ++II K + S + +V + + N QP + +LI F K L
Sbjct: 467 TPTLVTYNIII-KGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELAS 525
Query: 119 GIFRWA---GSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKG----HIVTLNTI 171
G+F G CP + Y ++ K ++D +LE M + ++ T N +
Sbjct: 526 GMFNEMMDRGLCP----NEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVL 581
Query: 172 AKVMRR---FSGAGQWEDAVRTFDELGTFGLEK----NTETMNLLLDTLCKEGKVELARS 224
+ + FSGA +EL LE+ + T + +++ LC G + LA
Sbjct: 582 IHGLTKQNNFSGA----------EELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALE 631
Query: 225 VFLEL--KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSY 282
+F ++ C+P N HT++ I + RV+EA+ E+K G P ++Y +I+
Sbjct: 632 MFNKMVKHGCLP-NLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVC 690
Query: 283 CRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDS 342
+ ++ L EM GC P + TY ++ L + + + + S D
Sbjct: 691 VMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAAST--STFDD 748
Query: 343 RFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLE 402
+ N ++ + V ++ E ++ +++ S G +A ++
Sbjct: 749 QIIN------------KDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYR 796
Query: 403 EMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC 462
M C PN T+ L S + K D L+ + ++ L +T Y +I LC
Sbjct: 797 SMVSQSQC-PNQDTYKHFLISLLRALKVD--LAMDVFKHMSDQRCELHLTGYKELICTLC 853
Query: 463 RANKCEWAYLLFKEMIGHDI 482
+ ++ + A +F++M+ +
Sbjct: 854 QLHRRKEARFVFEKMLSRAL 873
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 107/243 (44%), Gaps = 7/243 (2%)
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
+ +Y+T++ + S V + ++ +G PN++ Y +V++ L K G+ +A I
Sbjct: 193 LFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIIN 252
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHH 391
K+ G KPD+ + +I R + A ++ M E G P+ +T++T+I +
Sbjct: 253 KVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFN-RMDEEGCEPNAATYSTLINGLCNS 311
Query: 392 GHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDI 451
G +A + EM + P V TF + + G+ ++ +D + K ++
Sbjct: 312 GRVNEALDFISEMTR-HGVLPTVHTFTAPIVALCDMGRIEDAWKIFID--MKKKGCKPNV 368
Query: 452 TTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAV 511
TYT +I G A LF M + P T +++ + + D+A + +
Sbjct: 369 YTYTSLISG---QRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNM 425
Query: 512 MKK 514
M K
Sbjct: 426 MGK 428
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 102/222 (45%), Gaps = 6/222 (2%)
Query: 269 HPCVISYSTI--IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
P + + I I+S + ++ LD +G + TYTT++ L K
Sbjct: 153 RPAAVGRARIHMIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTV 212
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
+ ++ G +P+ +N +I L + V++A + ++ ++G+ PDT T+ +MI
Sbjct: 213 MDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIIN-KVFKSGMKPDTFTYTSMIL 271
Query: 387 MFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHH 446
+ + + AF + M++ E C+PN T+ L+ +G+ +E L + +M +H
Sbjct: 272 GYCRNRDLDSAFEIFNRMDE-EGCEPNAATYSTLINGLCNSGRVNEAL-DFISEMT-RHG 328
Query: 447 LSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ + T+T I LC + E A+ +F +M P T
Sbjct: 329 VLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYT 370
>gi|297839351|ref|XP_002887557.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333398|gb|EFH63816.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 845
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 163/326 (50%), Gaps = 5/326 (1%)
Query: 101 YLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM 160
Y N+++ + D++ +ALG F W PG++H Y MV LG+ +Q + LL+EM
Sbjct: 317 YQANQVLKQM-DNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINRLLDEM 375
Query: 161 SK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV 219
K G T +++ + A +A+ F ++ G E + T L+D K G +
Sbjct: 376 VKDGCKPNTVTYNRLIHSYGRANYLNEAMNVFKQMQEAGCEPDRVTYCTLIDIHAKAGFL 435
Query: 220 ELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTI 278
++A ++ +++ + P+ T+++ I+ K + A EM G GC P +++++ +
Sbjct: 436 DIAMDMYQRMQAAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIM 495
Query: 279 IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
I + + N+ +L +MQ G P+ VTY+ VM L G EEA + +M+
Sbjct: 496 IALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNW 555
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
PD + L+ G+A V++A YQ EM G+ P+ T N++++ F +A+
Sbjct: 556 VPDEPVYGLLVDLWGKAGNVEKAWQWYQ-EMLHAGLRPNVPTCNSLLSTFLRVHRMSEAY 614
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSC 424
++L+ M L P++QT+ LL C
Sbjct: 615 NLLQSMLAL-GLHPSLQTYTLLLSCC 639
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 157/353 (44%), Gaps = 13/353 (3%)
Query: 163 GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELA 222
G++V ++ ++RRF +W A + L FG + N +L + L
Sbjct: 284 GYVV--ENVSGILRRF----KWGHAAE--EALHNFGFRMDAYQANQVLKQMDNYANA-LG 334
Query: 223 RSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSY 282
+L+ + + HT+ + + + + EM GC P ++Y+ +I SY
Sbjct: 335 FFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINRLLDEMVKDGCKPNTVTYNRLIHSY 394
Query: 283 CRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDS 342
R ++ + +MQ GC P+ VTY T++ AK+G + A+ + ++M+ G PD+
Sbjct: 395 GRANYLNEAMNVFKQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAAGLSPDT 454
Query: 343 RFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLE 402
++ +I LG+A + A ++ EM G P+ TFN MI + + ++E A +
Sbjct: 455 FTYSVIINCLGKAGHLPAAHRLF-CEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYR 513
Query: 403 EMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC 462
+M +P+ T+ +++ G +E + +M K+ + D Y L++
Sbjct: 514 DMQNAGF-QPDKVTYSIVMEVLGHCGFLEEA-EGVFAEMQRKNWVP-DEPVYGLLVDLWG 570
Query: 463 RANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
+A E A+ ++EM+ + P TC +L + H A + M L
Sbjct: 571 KAGNVEKAWQWYQEMLHAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLAL 623
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 92/243 (37%), Gaps = 37/243 (15%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
+ +M+ + K R + L +M + G T + VM G E+A F E+
Sbjct: 492 FNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQ 551
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVD 254
+ LL+D K G VE A + E L + + PN T N + + +++R+
Sbjct: 552 RKNWVPDEPVYGLLVDLWGKAGNVEKAWQWYQEMLHAGLRPNVPTCNSLLSTFLRVHRMS 611
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQ-----------SYCRQY----------------- 286
EA +Q M G HP + +Y+ ++ +C Q
Sbjct: 612 EAYNLLQSMLALGLHPSLQTYTLLLSCCTDARSNFDMGFCGQLMAVSGHPAHMFLLKMPP 671
Query: 287 ---NFSKVYE----LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
+ KV + LD M ++ V+ +L KSG EEA + E +
Sbjct: 672 AGPDGQKVRDHVSNFLDFMHSEDRESKRGLMDAVVDFLHKSGLKEEAGSVWEVAAVKNVY 731
Query: 340 PDS 342
PD+
Sbjct: 732 PDA 734
>gi|255540881|ref|XP_002511505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550620|gb|EEF52107.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 876
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 174/360 (48%), Gaps = 18/360 (5%)
Query: 70 IISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPG 129
I+ ++ G + +E +L ++ P Y N+++ + +D AL F W PG
Sbjct: 324 ILRQIRWGPAAEEALANLNY-----SMDP--YQANQVLKQLQDH-TVALNFFYWLKRQPG 375
Query: 130 YEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKG----HIVTLNTIAKVMRRFSGAGQWE 185
+ H Y MV ILG+ +Q + LL++M K ++VT N +++ + A
Sbjct: 376 FNHDGHTYTTMVGILGRAKQFGAINKLLDQMVKDGCQPNVVTYN---RLIHSYGRANYLN 432
Query: 186 DAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFI 244
DAV F+E+ G E + T L+D K G ++ A ++ +++ + P+ T+++ I
Sbjct: 433 DAVDVFNEMQRVGCEPDRVTYCTLIDIHAKAGFLDFALEMYQRMQAAGLSPDTFTYSVII 492
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
+ K + A EM GC P +++Y+ +I + N+ +L +MQ+ G
Sbjct: 493 NCLGKAGHLAAAHKLFCEMVEQGCVPNLVTYNIMIALQAKARNYQSALKLYRDMQSAGFQ 552
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
P+ VTY+ VM L G +EA + +MK PD + L+ G+A V++A
Sbjct: 553 PDKVTYSIVMEVLGHCGYLDEAEAVFSEMKRKNWVPDEPVYGLLVDLWGKAGNVEKAWQW 612
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
YQ M G+ P+ T N++++ F A+++L+ M +L P++QT+ LL C
Sbjct: 613 YQT-MLNTGLRPNVPTCNSLLSAFLRVHKLADAYNLLQSMLEL-GLNPSLQTYTLLLSCC 670
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 165/354 (46%), Gaps = 14/354 (3%)
Query: 161 SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVE 220
S GHIV +A ++R+ +W A + L + N +L L ++ V
Sbjct: 313 SNGHIV--ENVAHILRQI----RWGPAAE--EALANLNYSMDPYQANQVLKQL-QDHTVA 363
Query: 221 LARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQ 280
L +L+ + + HT+ + + + + +M GC P V++Y+ +I
Sbjct: 364 LNFFYWLKRQPGFNHDGHTYTTMVGILGRAKQFGAINKLLDQMVKDGCQPNVVTYNRLIH 423
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
SY R + ++ +EMQ GC P+ VTY T++ AK+G + A+ + ++M+ G P
Sbjct: 424 SYGRANYLNDAVDVFNEMQRVGCEPDRVTYCTLIDIHAKAGFLDFALEMYQRMQAAGLSP 483
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
D+ ++ +I LG+A + A ++ EM E G P+ T+N MI + + +++ A +
Sbjct: 484 DTFTYSVIINCLGKAGHLAAAHKLF-CEMVEQGCVPNLVTYNIMIALQAKARNYQSALKL 542
Query: 401 LEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHG 460
+M +P+ T+ +++ G DE + +M K+ + D Y L++
Sbjct: 543 YRDMQSAGF-QPDKVTYSIVMEVLGHCGYLDEA-EAVFSEMKRKNWVP-DEPVYGLLVDL 599
Query: 461 LCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKH-MYDAAEKIEAVMK 513
+A E A+ ++ M+ + P TC +L + H + DA ++++++
Sbjct: 600 WGKAGNVEKAWQWYQTMLNTGLRPNVPTCNSLLSAFLRVHKLADAYNLLQSMLE 653
>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
Length = 485
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 164/322 (50%), Gaps = 5/322 (1%)
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSC 232
+MR G+ A FDE+ + G+ + + N ++ +C+ G ++ A ++ + ++
Sbjct: 122 LMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAG 181
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
+ P+ +T+ I G C++ R+++A+ ++M G G P + ++ +I ++C++ + +
Sbjct: 182 VTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETML 241
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
EL EM+ +G P+ VTY +++ L ++ D + A I +M+ G +PD+ + LI
Sbjct: 242 ELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGY 301
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
+ + A+ + Q M GV D T+ +I+ S G A VL EM + +P
Sbjct: 302 CKEEELDMAMEIKQ-NMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMME-AGLEP 359
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
+ T+ ++ + + G L +LL +M NK + TY ++++G C+ + + A +
Sbjct: 360 DNTTYTMVIDAFCRKGDVKTGL-RLLKEMQNKGR-KPGVVTYNVIMNGFCKLGQMKNADM 417
Query: 473 LFKEMIGHDITPRYQTCRLILD 494
L MI ++P T ++LD
Sbjct: 418 LLNAMINIGVSPDDITYNILLD 439
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 164/343 (47%), Gaps = 12/343 (3%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKG---HIVTLNTIAKVMRRFSGAGQW 184
G ++++ +++ L ++ ++ + + +EM S+G +V+ NT+ M R AG
Sbjct: 111 GLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCR---AGDL 167
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIF 243
+ A + G+ + T L+ LC+ G++E AR VF ++ + PNA F I
Sbjct: 168 DGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTIL 227
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
I CK + +EM+ G P ++Y+ I+ CR + ++ EM++ G
Sbjct: 228 IDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGL 287
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
P+ VTYTT++ K + + A+ I + M G D + LI L +A R +A
Sbjct: 288 RPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAER 347
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
V EM E G+ PD +T+ +I F G + +L+EM + KP V T++ ++
Sbjct: 348 VLG-EMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQN-KGRKPGVVTYNVIMNG 405
Query: 424 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANK 466
K G+ LL+ M+N +S D TY +++ G C+ K
Sbjct: 406 FCKLGQMKNA-DMLLNAMIN-IGVSPDDITYNILLDGHCKHGK 446
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 166/368 (45%), Gaps = 12/368 (3%)
Query: 95 AIQPSHYLVNKLIHRFK--DDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQ 152
+ P L N L+ + SA +F S G + + M+ + + +D
Sbjct: 111 GLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQS-RGVRRTVVSFNTMISGMCRAGDLDG 169
Query: 153 MRALLEEMSKGHIVT-LNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLD 211
L MS+ + + T +++ G+ EDA F+++ G++ N +L+D
Sbjct: 170 AETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILID 229
Query: 212 TLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHP 270
CK+G E + E++ + P+A T+N ++G C+ + A + EM+ G P
Sbjct: 230 AHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRP 289
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRIT 330
++Y+T+I YC++ E+ M A+G + VTYT ++S L+K+G +A R+
Sbjct: 290 DTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVL 349
Query: 331 EKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSH 390
+M G +PD+ + +I R V+ + + + EM G P T+N ++ F
Sbjct: 350 GEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLK-EMQNKGRKPGVVTYNVIMNGFCK 408
Query: 391 HGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLD 450
G + A +L M + P+ T++ LL K GK + ++++ + D
Sbjct: 409 LGQMKNADMLLNAMINI-GVSPDDITYNILLDGHCKHGKVTD-----IEELKSAKGTVPD 462
Query: 451 ITTYTLVI 458
+ YT ++
Sbjct: 463 LGVYTSIV 470
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 126/271 (46%), Gaps = 4/271 (1%)
Query: 229 LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
L + +PP A FN+ + ++ + AQ EM+ G V+S++T+I CR +
Sbjct: 108 LDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDL 167
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
L M G P+V TY ++ L + G E+A + EKM G KP++ F L
Sbjct: 168 DGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTIL 227
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
I + + + +++ EM E GV PD T+N ++ + A ++ EM +
Sbjct: 228 IDAHCKKGDAETMLELHR-EMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEM-RSA 285
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
+P+ T+ L+ K + D + ++ +MV + LD TYT +I GL +A +
Sbjct: 286 GLRPDTVTYTTLIDGYCKEEELDMAM-EIKQNMV-AEGVGLDEVTYTALISGLSKAGRSA 343
Query: 469 WAYLLFKEMIGHDITPRYQTCRLILDEVKQK 499
A + EM+ + P T +++D +K
Sbjct: 344 DAERVLGEMMEAGLEPDNTTYTMVIDAFCRK 374
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 118/257 (45%), Gaps = 14/257 (5%)
Query: 70 IISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGI---FRWA 124
I+ H + E L ++ ++P N +++ D KSA GI R A
Sbjct: 226 ILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSA 285
Query: 125 GSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQ 183
G P + Y ++D K ++D + + M ++G + T ++ S AG+
Sbjct: 286 GLRP----DTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGR 341
Query: 184 WEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNI 242
DA R E+ GLE + T +++D C++G V+ + E+++ P T+N+
Sbjct: 342 SADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNV 401
Query: 243 FIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
++G+CK+ ++ A + M G P I+Y+ ++ +C+ + + EL A+G
Sbjct: 402 IMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEEL---KSAKG 458
Query: 303 CPPNVVTYTTVMSYLAK 319
P++ YT+++ + K
Sbjct: 459 TVPDLGVYTSIVGEIVK 475
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 96/220 (43%), Gaps = 8/220 (3%)
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
+LLD G PP + +M L + G+ A + ++M+ G + FN +I +
Sbjct: 106 QLLD----AGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGM 161
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
RA + A +++ M E GV PD T+ +I G E A V E+M KP
Sbjct: 162 CRAGDLDGAETLHR-RMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCG-RGMKP 219
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
N F L+ + K G + L L + + + D TY +++GLCRA + A
Sbjct: 220 NAVVFTILIDAHCKKGDAETMLE--LHREMRERGVRPDAVTYNAIVNGLCRARDLKSASG 277
Query: 473 LFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
+ EM + P T ++D ++ D A +I+ M
Sbjct: 278 IVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNM 317
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 63/131 (48%), Gaps = 3/131 (2%)
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
+ +++ + G+ P+ FN ++ G A +V +EM + V +F+ ++
Sbjct: 102 AFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQS-RGVRRTVVSFNTMISG 160
Query: 424 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
+ G D ++ L +++ ++ D+ TY +I GLCR + E A +F++M G +
Sbjct: 161 MCRAGDLDG--AETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMK 218
Query: 484 PRYQTCRLILD 494
P +++D
Sbjct: 219 PNAVVFTILID 229
>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
Group]
gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
Length = 796
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/432 (23%), Positives = 205/432 (47%), Gaps = 14/432 (3%)
Query: 82 EVFQSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEM 139
+VF+SL + + P+HY N L+H K AL G + Y
Sbjct: 194 DVFRSLIELR----LHPNHYTFNLLVHTHCSKGTLADALATLSTMQGF-GLSPDAVTYNT 248
Query: 140 MVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
+++ + + + RALL M + I T T ++ F+ G + A + + + +G
Sbjct: 249 LLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYG 308
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLELK--SCIPPNAHTFNIFIHGWCKINRVDEA 256
E + T N+L LC+ GKV+ A + E++ S P+ T+N + K +A
Sbjct: 309 FEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDA 368
Query: 257 QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSY 316
++EM+ G P +++++ +++S C++ + L+++ +G P+V+TY T++
Sbjct: 369 LRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDA 428
Query: 317 LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
K+G+ +A + ++M G K D+ N ++Y L + R ++A + P+ G P
Sbjct: 429 YCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSP-PQRGFVP 487
Query: 377 DTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQ 436
D ++ T++ + + E A + ++M + P++ T++ L+K + + E + +
Sbjct: 488 DEVSYGTVMAAYFKEYNPEPALRLWDQMIE-RKLIPSISTYNTLIKGLCRMERLKEAIDK 546
Query: 437 LLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV 496
L+++V K L D TTY ++IH C+ E A+ +M+ + P TC +++ +
Sbjct: 547 -LNELVEK-GLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGL 604
Query: 497 KQKHMYDAAEKI 508
D A K+
Sbjct: 605 CLHGKLDKALKL 616
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 160/318 (50%), Gaps = 14/318 (4%)
Query: 198 GLEKNTETMNLLLDTLCK------EGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKIN 251
G+ + + N +L L + + +++ RS +EL+ + PN +TFN+ +H C
Sbjct: 166 GVRPSLQAANAVLSALSRSPSTLPQASLDVFRS-LIELR--LHPNHYTFNLLVHTHCSKG 222
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
+ +A T+ M+G G P ++Y+T++ ++CR+ + LL M+ G P TY
Sbjct: 223 TLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYN 282
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
T++S A+ G ++A ++ E M G +PD R +N L L +A +V EA + + EM
Sbjct: 283 TLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEA-FRLKDEMER 341
Query: 372 NGVA-PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKT 430
A PD T+NT++ A +LEEM + KP + T + ++KS K GK
Sbjct: 342 LSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRD-KGVKPTLVTHNIVVKSLCKEGKL 400
Query: 431 DECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCR 490
+E L +L + + + L+ D+ TY +I C+A A+ L EM+G + T
Sbjct: 401 EEALGKL--EKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLN 458
Query: 491 LILDEVKQKHMYDAAEKI 508
+L + + Y+ AE++
Sbjct: 459 TVLYNLCKMKRYEDAEEL 476
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 107/412 (25%), Positives = 192/412 (46%), Gaps = 14/412 (3%)
Query: 94 NAIQPSHYLVNKLIHRF-KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQ 152
+ I P+ N L+ F + W + + G+E Y ++ L + ++D+
Sbjct: 272 DGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDE 331
Query: 153 MRALLEEMSK-----GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN 207
L +EM + +VT NT+ ++ + DA+R +E+ G++ T N
Sbjct: 332 AFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSS---DALRLLEEMRDKGVKPTLVTHN 388
Query: 208 LLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
+++ +LCKEGK+E A ++ + + P+ T+N I +CK V +A + EM G
Sbjct: 389 IVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGK 448
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
G + +T++ + C+ + ELL +G P+ V+Y TVM+ K + E A
Sbjct: 449 GLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPA 508
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
+R+ ++M P +N LI L R R++EA+ E+ E G+ PD +T+N +I
Sbjct: 509 LRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLN-ELVEKGLVPDETTYNIIIH 567
Query: 387 MFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHH 446
+ G E AF +M + KP+V T + L+ GK D+ L +L + V K
Sbjct: 568 AYCKEGDLENAFRFHNKMVE-NSFKPDVVTCNTLMNGLCLHGKLDKAL-KLFESWVEKGK 625
Query: 447 LSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQ 498
+D+ TY +I +C+ + A F +M + P T ++L + +
Sbjct: 626 -KVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSE 676
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 142/308 (46%), Gaps = 8/308 (2%)
Query: 162 KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVEL 221
+G + + VM + E A+R +D++ L + T N L+ LC+ +++
Sbjct: 483 RGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKE 542
Query: 222 ARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQ 280
A EL + + P+ T+NI IH +CK ++ A +M + P V++ +T++
Sbjct: 543 AIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMN 602
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
C K +L + +G +V+TY T++ + K GD + A+ + M++ G +P
Sbjct: 603 GLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQP 662
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHE-KAFH 399
D+ +N ++ L A R +EA + ++ ++G + +F + S + K
Sbjct: 663 DAFTYNVVLSALSEAGRSEEAHNMLH-KLADSGKL--SQSFACPLLKPSSADEADVKEHE 719
Query: 400 VLEEMNKLEHCKPN-VQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
E E + N ++T+ L G+ E +LD+M+ K + +D +TY ++
Sbjct: 720 GKPEAESSEKAQDNALETYMERLNGLCTGGQLKEA-KAVLDEMMQK-GMPVDSSTYITLM 777
Query: 459 HGLCRANK 466
GL + K
Sbjct: 778 EGLIKRQK 785
>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
Length = 796
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 162/318 (50%), Gaps = 14/318 (4%)
Query: 198 GLEKNTETMNLLLDTLCK------EGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKIN 251
G+ + + N +L L + + +++ RS+ +EL+ + PN +TFN+ +H C
Sbjct: 166 GVRPSLQAANAVLSALSRSPSTLPQASLDVFRSL-IELR--LHPNHYTFNLLVHTHCSKG 222
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
+ +A T+ M+G G P ++Y+T++ ++CR+ + LL M+ G P TY
Sbjct: 223 TLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYN 282
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
T++S A+ G ++A ++ E M G +PD R +N L L +A +V EA + + EM
Sbjct: 283 TLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEA-FRLKDEMER 341
Query: 372 NGVA-PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKT 430
G A PD T+NT++ A +LEEM + KP + T + ++KS K GK
Sbjct: 342 LGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRD-KGVKPTLVTHNIVVKSLCKEGKL 400
Query: 431 DECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCR 490
+E L +L + + + L+ D+ TY +I C+A A+ L EM+G + T
Sbjct: 401 EEALGKL--EKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLN 458
Query: 491 LILDEVKQKHMYDAAEKI 508
+L + + Y+ AE++
Sbjct: 459 TVLYNLCKMKRYEDAEEL 476
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 101/432 (23%), Positives = 203/432 (46%), Gaps = 14/432 (3%)
Query: 82 EVFQSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEM 139
+VF+SL + + P+HY N L+H K AL G + Y
Sbjct: 194 DVFRSLIELR----LHPNHYTFNLLVHTHCSKGTLADALATLSTMQGF-GLSPDAVTYNT 248
Query: 140 MVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
+++ + + + RALL M + I T T ++ F+ G + A + + + +G
Sbjct: 249 LLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYG 308
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLELK--SCIPPNAHTFNIFIHGWCKINRVDEA 256
E + T N+L LC+ GKV+ A + E++ P+ T+N + K +A
Sbjct: 309 FEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDA 368
Query: 257 QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSY 316
++EM+ G P +++++ +++S C++ + L+++ +G P+V+TY T++
Sbjct: 369 LRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDA 428
Query: 317 LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
K+G+ +A + ++M G K D+ N ++Y L + R ++A + P+ G P
Sbjct: 429 YCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSP-PQRGFVP 487
Query: 377 DTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQ 436
D ++ T++ + + E A + ++M + P++ T++ L+K + + E + +
Sbjct: 488 DEVSYGTVMAAYFKEYNPEPALRLWDQMIE-RKLIPSISTYNTLIKGLCRMERLKEAIDK 546
Query: 437 LLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV 496
L ++ V K L D TTY ++IH C+ E A+ +M+ + P TC +++ +
Sbjct: 547 L-NEFVEKG-LVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGL 604
Query: 497 KQKHMYDAAEKI 508
D A K+
Sbjct: 605 CLHGKLDKALKL 616
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/412 (25%), Positives = 191/412 (46%), Gaps = 14/412 (3%)
Query: 94 NAIQPSHYLVNKLIHRF-KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQ 152
+ I P+ N L+ F + W + + G+E Y ++ L + ++D+
Sbjct: 272 DGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDE 331
Query: 153 MRALLEEMSK-----GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN 207
L +EM + +VT NT+ ++ + DA+R +E+ G++ T N
Sbjct: 332 AFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSS---DALRLLEEMRDKGVKPTLVTHN 388
Query: 208 LLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
+++ +LCKEGK+E A ++ + + P+ T+N I +CK V +A + EM G
Sbjct: 389 IVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGK 448
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
G + +T++ + C+ + ELL +G P+ V+Y TVM+ K + E A
Sbjct: 449 GLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPA 508
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
+R+ ++M P +N LI L R R++EA+ E E G+ PD +T+N +I
Sbjct: 509 LRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLN-EFVEKGLVPDETTYNIIIH 567
Query: 387 MFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHH 446
+ G E AF +M + KP+V T + L+ GK D+ L +L + V K
Sbjct: 568 AYCKEGDLENAFRFHNKMVE-NSFKPDVVTCNTLMNGLCLHGKLDKAL-KLFESWVEKGK 625
Query: 447 LSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQ 498
+D+ TY +I +C+ + A F +M + P T ++L + +
Sbjct: 626 -KVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSE 676
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 142/308 (46%), Gaps = 8/308 (2%)
Query: 162 KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVEL 221
+G + + VM + E A+R +D++ L + T N L+ LC+ +++
Sbjct: 483 RGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKE 542
Query: 222 ARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQ 280
A E ++ + P+ T+NI IH +CK ++ A +M + P V++ +T++
Sbjct: 543 AIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMN 602
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
C K +L + +G +V+TY T++ + K GD + A+ + M++ G +P
Sbjct: 603 GLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQP 662
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHE-KAFH 399
D+ +N ++ L A R +EA + ++ ++G + +F + S + K
Sbjct: 663 DAFTYNVVLSALSEAGRSEEAHNMLH-KLADSGKL--SQSFACPLLKPSSADEADVKEHE 719
Query: 400 VLEEMNKLEHCKPN-VQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
E E + N ++T+ L G+ E +LD+M+ K + +D +TY ++
Sbjct: 720 GKPEAESSEKAQDNALETYMERLNGLCTGGQLKEA-KAVLDEMMQK-GMPVDCSTYITLM 777
Query: 459 HGLCRANK 466
GL + K
Sbjct: 778 EGLIKRQK 785
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 176/346 (50%), Gaps = 15/346 (4%)
Query: 145 GKVRQ-MDQMRALLEEMSKGHIVTLN-TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKN 202
G+V+ +D MR + E +G I T V+ + G+ ++AV+ FDE+ T G K
Sbjct: 86 GRVQAALDIMREMRE---RGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKP 142
Query: 203 TETM-NLLLDTLCKEGKVELA---RSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQW 258
M N L+ C +GK++ A R +E + T+N+ +H R EA
Sbjct: 143 EAVMYNALIGGYCDQGKLDTALLYRDRMVE--RGVAMTVATYNLLVHALFMDGRGTEAYE 200
Query: 259 TIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLA 318
++EM G G P V +Y+ +I +C++ N K E+ + M +G VVTYT+++ L+
Sbjct: 201 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALS 260
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDT 378
K G +E ++ ++ G +PD +N LI + + + A + EM + +APD
Sbjct: 261 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMG-EMEKKRIAPDD 319
Query: 379 STFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLL 438
T+NT++ G ++A +++EM K +P++ T++ L+ G + L ++
Sbjct: 320 VTYNTLMRGLCLLGRVDEARKLIDEMTK-RGIQPDLVTYNTLISGYSMKGDVKDAL-RIR 377
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
++M+NK + + TY +I GLC+ + + A + KEM+ + ITP
Sbjct: 378 NEMMNK-GFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITP 422
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 154/345 (44%), Gaps = 42/345 (12%)
Query: 202 NTETMNLLLDTLCKEGKVELARSVFLELK--SCIPPNAHTFNIFIHGWCKINRVDEAQWT 259
N T N ++ C G+V+ A + E++ I PN +T+ I GWCK+ RVDEA
Sbjct: 71 NAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKV 130
Query: 260 IQEMKGHG-CHPCVISYSTIIQSYCRQ------------------------YNF------ 288
EM G P + Y+ +I YC Q YN
Sbjct: 131 FDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALF 190
Query: 289 -----SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSR 343
++ YEL++EM +G P+V TY +++ K G+ ++A+ I E M G +
Sbjct: 191 MDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVV 250
Query: 344 FFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEE 403
+ LIY L + +VQE ++ E G+ PD +N +I S G+ ++AF ++ E
Sbjct: 251 TYTSLIYALSKKGQVQETDKLFD-EAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE 309
Query: 404 MNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCR 463
M K + P+ T++ L++ G+ DE +L+D+M K + D+ TY +I G
Sbjct: 310 MEK-KRIAPDDVTYNTLMRGLCLLGRVDEA-RKLIDEMT-KRGIQPDLVTYNTLISGYSM 366
Query: 464 ANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+ A + EM+ P T ++ + + D AE +
Sbjct: 367 KGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENM 411
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 145/309 (46%), Gaps = 6/309 (1%)
Query: 81 DEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWK--SALGIFRWAGSCPGYEHSSEIYE 138
DE + + ++P + N LI + D K +AL ++R G + Y
Sbjct: 125 DEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTAL-LYRDRMVERGVAMTVATYN 183
Query: 139 MMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTF 197
++V L + + L+EEM KG + T ++ G + A+ F+ +
Sbjct: 184 LLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRR 243
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEA 256
G+ T L+ L K+G+V+ +F E ++ I P+ +N I+ +D A
Sbjct: 244 GVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRA 303
Query: 257 QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSY 316
+ EM+ P ++Y+T+++ C + +L+DEM +G P++VTY T++S
Sbjct: 304 FEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISG 363
Query: 317 LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
+ GD ++A+RI +M G P +N LI L + + +A + + EM ENG+ P
Sbjct: 364 YSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVK-EMVENGITP 422
Query: 377 DTSTFNTMI 385
D ST+ ++I
Sbjct: 423 DDSTYISLI 431
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 99/208 (47%), Gaps = 8/208 (3%)
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRIT 330
C +++ +++ C ++ ELL +M PN VTY TV++ G + A+ I
Sbjct: 40 CTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIM 95
Query: 331 EKMKIVGS-KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFS 389
+M+ G P+ + +I + RV EAV V+ + + V P+ +N +I +
Sbjct: 96 REMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYC 155
Query: 390 HHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSL 449
G + A + M + V T++ L+ + F G+ E +L+++M K L+
Sbjct: 156 DQGKLDTALLYRDRMVE-RGVAMTVATYNLLVHALFMDGRGTEAY-ELVEEMGGKG-LAP 212
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEM 477
D+ TY ++I+G C+ + A +F+ M
Sbjct: 213 DVFTYNILINGHCKEGNVKKALEIFENM 240
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 94/206 (45%), Gaps = 6/206 (2%)
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
+ + L +M P T+ ++ +L +G A+ + +M +P++ +N +
Sbjct: 23 APAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTV 78
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
I RVQ A+ + + G+AP+ T+ T+I+ + G ++A V +EM
Sbjct: 79 IAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKG 138
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
KP ++ L+ GK D L L D + + +++ + TY L++H L +
Sbjct: 139 EVKPEAVMYNALIGGYCDQGKLDTAL--LYRDRMVERGVAMTVATYNLLVHALFMDGRGT 196
Query: 469 WAYLLFKEMIGHDITPRYQTCRLILD 494
AY L +EM G + P T ++++
Sbjct: 197 EAYELVEEMGGKGLAPDVFTYNILIN 222
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 99/227 (43%), Gaps = 5/227 (2%)
Query: 95 AIQPSHYLVNKLI--HRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQ 152
+ P + N LI H + + K AL IF S G + Y ++ L K Q+ +
Sbjct: 209 GLAPDVFTYNILINGHCKEGNVKKALEIFENM-SRRGVRATVVTYTSLIYALSKKGQVQE 267
Query: 153 MRALLEE-MSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLD 211
L +E + +G L ++ S +G + A E+ + + T N L+
Sbjct: 268 TDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMR 327
Query: 212 TLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHP 270
LC G+V+ AR + E+ K I P+ T+N I G+ V +A EM G +P
Sbjct: 328 GLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNP 387
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
+++Y+ +IQ C+ ++ EM G P+ TY +++ L
Sbjct: 388 TLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 434
>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
Length = 544
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/399 (26%), Positives = 190/399 (47%), Gaps = 14/399 (3%)
Query: 86 SLKQDHVCNAIQPSHYLVNKLIHRFKD--DWKSALGIFRWAGSCPGYEHSSEIYEMMVDI 143
S+ D + + P+ +N L+ + SAL +FR + P S+ ++
Sbjct: 53 SVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGF 112
Query: 144 LGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRF----SGAGQWEDAVRTFDELGTFGL 199
R D + L + V T V++ A + E A+ F E+ G+
Sbjct: 113 FMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGV 172
Query: 200 EKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWT 259
E + E+ ++LL L G++ A ++F + +C P+ T+N+ + G+CKI + EAQ
Sbjct: 173 EPDLESYHILLSALSDSGRMAEAHALFSAM-TC-SPDIMTYNVLMDGYCKIGQTYEAQSL 230
Query: 260 IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK 319
++E+ G P V +YS II YC+ + +E+ +M C PN VT+ T+++ K
Sbjct: 231 MKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCK 290
Query: 320 SGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL-GRASRVQEAVYVYQVEMPENGVAPDT 378
+G E+AI++ +M+ +G K +N LI +L + V AV ++ ++ G+ P
Sbjct: 291 AGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFN-KLEGAGLTPTI 349
Query: 379 STFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLL 438
T+N++I F +A +EM C PNV T+ L+ K + E ++ L
Sbjct: 350 VTYNSLIQGFCDARRLSEAMQYFDEMEG--KCAPNVITYSILIDGLCKVRRMKEA-AKTL 406
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
+DM H + + TY +I+G C+ + + A L F++M
Sbjct: 407 EDM-KAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKM 444
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 175/355 (49%), Gaps = 17/355 (4%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDA 187
G E E Y +++ L +M + AL M+ I+T N + M + GQ +A
Sbjct: 171 GVEPDLESYHILLSALSDSGRMAEAHALFSAMTCSPDIMTYNVL---MDGYCKIGQTYEA 227
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIH 245
E+ G E N T +++++ CK KVE A VF+++ +C+P NA TFN I
Sbjct: 228 QSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVP-NAVTFNTLIA 286
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY---ELLDEMQAQG 302
G+CK +++A EM+ GC +++Y+T+I S C++ VY +L ++++ G
Sbjct: 287 GFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKR--GGVYTAVDLFNKLEGAG 344
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
P +VTY +++ + EA++ ++M+ P+ ++ LI L + R++EA
Sbjct: 345 LTPTIVTYNSLIQGFCDARRLSEAMQYFDEME-GKCAPNVITYSILIDGLCKVRRMKEAA 403
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLK 422
+ +M +G P T+ +I F G + A E+M KL C PN F+ L+
Sbjct: 404 KTLE-DMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKM-KLAGCAPNTVIFNTLID 461
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
K + ++ L +LL M + D+ TY +I GLC AN+ E A LF M
Sbjct: 462 GLCKAERANDGL-RLLCHM-HAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGM 514
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 146/314 (46%), Gaps = 47/314 (14%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGH----IVTLNTIAKVMRRFSGAGQW 184
GYE + Y ++++ K+ ++++ + +M + + VT NT+ + F AG
Sbjct: 238 GYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTL---IAGFCKAGML 294
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCK---------------EG------------ 217
EDA++ F E+ G + T N L+D+LCK EG
Sbjct: 295 EDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNS 354
Query: 218 ---------KVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGC 268
++ A F E++ PN T++I I G CK+ R+ EA T+++MK HG
Sbjct: 355 LIQGFCDARRLSEAMQYFDEMEGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGY 414
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
P V++Y +I +C+ ++M+ GC PN V + T++ L K+ + +R
Sbjct: 415 TPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLR 474
Query: 329 ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF 388
+ M G KPD +NCLI L A+RV++A ++ AP+ +TFN +I
Sbjct: 475 LLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFD----GMACAPNVTTFNFLIRGL 530
Query: 389 SHHGHHEKAFHVLE 402
E+A ++L+
Sbjct: 531 CAQKKVEEARNILD 544
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/431 (23%), Positives = 190/431 (44%), Gaps = 21/431 (4%)
Query: 68 DVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAG 125
+ ++S + D+ + K+ + P+ + N LI F A+ +F
Sbjct: 1 NALLSGLVSARKHDQALRLFKE-VLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMK 59
Query: 126 SCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVM-RRFSGAGQW 184
S ++S + +++ L ++ QM L EM G + + ++ R F AG+
Sbjct: 60 SSGLLPNASTMNTLLLG-LCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRV 118
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK----VELARSVFLELK-SCIPPNAHT 239
DA+ ++ T T NL+L LC E K +E A F E+K S + P+ +
Sbjct: 119 RDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLES 178
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
++I + R+ EA M C P +++Y+ ++ YC+ + L+ E+
Sbjct: 179 YHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEIL 235
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
G PNV TY+ +++ K EEA + KM P++ FN LI +A ++
Sbjct: 236 KAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLE 295
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHC--KPNVQTF 417
+A+ ++ EM + G T+NT+I + ++ NKLE P + T+
Sbjct: 296 DAIKLF-AEMEKIGCKATIVTYNTLIDSLCKK--RGGVYTAVDLFNKLEGAGLTPTIVTY 352
Query: 418 HPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
+ L++ + E + Q D+M K + ++ TY+++I GLC+ + + A ++M
Sbjct: 353 NSLIQGFCDARRLSEAM-QYFDEMEGK--CAPNVITYSILIDGLCKVRRMKEAAKTLEDM 409
Query: 478 IGHDITPRYQT 488
H TP T
Sbjct: 410 KAHGYTPTVVT 420
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 151/314 (48%), Gaps = 12/314 (3%)
Query: 207 NLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKG 265
N LL L K + A +F E L PNAHT+N+ I G+CK ++ +A +MK
Sbjct: 1 NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60
Query: 266 HGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEE 325
G P + +T++ C S +L EMQA P ++ ++ +G +
Sbjct: 61 SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120
Query: 326 AIRITEKMKIVGSKPDSRFFNCLIYTL----GRASRVQEAVYVYQVEMPENGVAPDTSTF 381
A+ + M+ S + +N ++ L A+R+++A+ ++ EM +GV PD ++
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFK-EMKASGVEPDLESY 179
Query: 382 NTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDM 441
+ +++ S G +A + M C P++ T++ L+ K G+T E +Q L
Sbjct: 180 HILLSALSDSGRMAEAHALFSAMT----CSPDIMTYNVLMDGYCKIGQTYE--AQSLMKE 233
Query: 442 VNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHM 501
+ K ++ TY+++I+ C+ +K E A+ +F +MI + P T ++ + M
Sbjct: 234 ILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGM 293
Query: 502 YDAAEKIEAVMKKL 515
+ A K+ A M+K+
Sbjct: 294 LEDAIKLFAEMEKI 307
>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
Length = 816
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 127/520 (24%), Positives = 216/520 (41%), Gaps = 57/520 (10%)
Query: 35 IVSSSPIESYCSDGARLDHHQVLCVDSPRL---PDI---DVIISKV----HVGSSEDEVF 84
I++S ++ +C + +L +P L PD+ ++++ + G ++D +
Sbjct: 149 IIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLR 208
Query: 85 QSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVD 142
+ VC+ P N +I F + D A +F+ G Y +V
Sbjct: 209 MMAEGGTVCS---PDVVAYNTVIDGFFKEGDVNKACDLFKEMVQ-RGIPPDLVTYSSVVH 264
Query: 143 ILGKVRQMDQMRALLEEMSKGHIVTLN-TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEK 201
L K R MD+ A L +M ++ N T ++ +S GQW++AVR F E+ +
Sbjct: 265 ALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILP 324
Query: 202 NTETMNLLLDTLCKEGKVELARSVF----------------------------------- 226
+ +N L+ +LCK GK++ AR VF
Sbjct: 325 DVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLF 384
Query: 227 -LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQ 285
L L I P TFN+ I + +D+A EM+ HG P V++Y T+I + CR
Sbjct: 385 DLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRI 444
Query: 286 YNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFF 345
E ++M QG P+ Y ++ G +A + ++ G + D FF
Sbjct: 445 GKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFF 504
Query: 346 NCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMN 405
+I L + RV +A ++ + + G+ PD +N ++ + G EKA V + M
Sbjct: 505 GSIINNLCKLGRVMDAQNIFDLTV-NVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMV 563
Query: 406 KLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRAN 465
+PNV + L+ K G+ DE LS L +M+ K + Y ++I GL A
Sbjct: 564 S-AGIEPNVVGYGTLVNGYCKIGRIDEGLS-LFREMLQK-GIKPSTILYNIIIDGLFEAG 620
Query: 466 KCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
+ A + F EM I T ++L + + +D A
Sbjct: 621 RTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEA 660
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 168/354 (47%), Gaps = 17/354 (4%)
Query: 170 TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFL-- 227
T A +M + A + E A+ F +L GL + + LL C+ + + A + L
Sbjct: 115 TYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHR 174
Query: 228 --ELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG--CHPCVISYSTIIQSYC 283
EL C+P + ++NI + C + +A ++ M G C P V++Y+T+I +
Sbjct: 175 TPEL-GCVP-DVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFF 232
Query: 284 RQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSR 343
++ + +K +L EM +G PP++VTY++V+ L K+ ++A +M G PD+
Sbjct: 233 KEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNW 292
Query: 344 FFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEE 403
+N LIY + +EAV V++ EM + PD NT++ +G ++A V +
Sbjct: 293 TYNNLIYGYSSTGQWKEAVRVFK-EMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDT 351
Query: 404 MNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLD--DMVNKHHLSLDITTYTLVIHGL 461
M ++ P+V ++ +L G CL + D D++ ++ I T+ ++I
Sbjct: 352 M-AMKGQNPDVFSYTIMLNGYATKG----CLVDMTDLFDLMLGDGIAPVICTFNVLIKAY 406
Query: 462 CRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEAVMKK 514
+ A ++F EM H + P T ++ + + M DA EK ++ +
Sbjct: 407 ANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQ 460
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 168/369 (45%), Gaps = 12/369 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
+ +++ +D+ + EM K H+VT T+ + R G+ +DA+ F+
Sbjct: 399 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRI---GKMDDAMEKFN 455
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKIN 251
++ G+ + + L+ C G + A+ + E + + + + F I+ CK+
Sbjct: 456 QMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLG 515
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
RV +AQ G HP + Y+ ++ YC K + D M + G PNVV Y
Sbjct: 516 RVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYG 575
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
T+++ K G +E + + +M G KP + +N +I L A R A + EM E
Sbjct: 576 TLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFH-EMTE 634
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
+G+A + T++ ++ + ++A + +E+ + + K ++ T + ++ F+T + +
Sbjct: 635 SGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAM-NVKIDIITLNTMIAGMFQTRRVE 693
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRL 491
E ++ L +++ L TY+++I L + E A +F M P +
Sbjct: 694 E--AKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNH 751
Query: 492 ILDEVKQKH 500
++ E+ +K+
Sbjct: 752 VVRELLKKN 760
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 125/266 (46%), Gaps = 3/266 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G + +Y M++D V +M++ + + M S G + ++ + G+ ++
Sbjct: 531 GLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEG 590
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHG 246
+ F E+ G++ +T N+++D L + G+ A+ F E+ +S I N T++I + G
Sbjct: 591 LSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRG 650
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
K DEA + +E++ +I+ +T+I + + +L + G P
Sbjct: 651 LFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPC 710
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
VTY+ +++ L K G EEA + M+ G +PDSR N ++ L + + + A Y
Sbjct: 711 AVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRA-GAYL 769
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHG 392
++ E + + T ++ +FS G
Sbjct: 770 SKIDERNFSLEHLTAMLLVDLFSSKG 795
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 86/190 (45%), Gaps = 6/190 (3%)
Query: 299 QAQG---CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
+AQG P TY +M ++ E A+ ++ G + D+ + L+ A
Sbjct: 102 RAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEA 161
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH-CKPNV 414
R EA+ + PE G PD ++N ++ + G +A +L M + C P+V
Sbjct: 162 KRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDV 221
Query: 415 QTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLF 474
++ ++ FK G ++ L +MV + + D+ TY+ V+H LC+A + A
Sbjct: 222 VAYNTVIDGFFKEGDVNKA-CDLFKEMVQR-GIPPDLVTYSSVVHALCKARAMDKAEAFL 279
Query: 475 KEMIGHDITP 484
++M+ + P
Sbjct: 280 RQMVNKGVLP 289
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 187/383 (48%), Gaps = 12/383 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ L K + MD+ +L M K G + T ++ + +GQ ++A+ T ++
Sbjct: 239 YSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMR 298
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
+ G+E N T + L++ LCK G+ AR +F + K + P+ T+ + G+ +
Sbjct: 299 SDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALV 358
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
E + M +G P ++ +I +Y +Q + + +M+ G PNVV Y TV+
Sbjct: 359 EMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVI 418
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
L KSG ++A+ E+M G P+ + LI+ L + +A + +EM + G+
Sbjct: 419 DVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELI-LEMLDRGI 477
Query: 375 APDTSTFNTMITMFSHHGH---HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
+T FN++I G EK F ++ + KP++ T++ L+ C GK D
Sbjct: 478 CLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG----VKPDIITYNTLIDGCCLAGKMD 533
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRL 491
E ++LL MV+ + DI TY +I+G CR ++ + A LFKEM+ ++P T +
Sbjct: 534 EA-TKLLASMVSVG-VKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNI 591
Query: 492 ILDEVKQKHMYDAAEKIEAVMKK 514
IL + AA+++ + K
Sbjct: 592 ILQGLFHTRRTAAAKELYVSITK 614
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 161/354 (45%), Gaps = 39/354 (11%)
Query: 165 IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARS 224
+V+ NT V+ F G + A T+ E+ G+ + T + ++ LCK ++ A
Sbjct: 201 VVSYNT---VLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAME 257
Query: 225 VFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYC 283
V + K+ + P+ T+N +HG+C + EA T+++M+ G P V++YS+++ C
Sbjct: 258 VLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLC 317
Query: 284 RQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSR 343
+ ++ ++ D M +G P++ TY T++ A G E + + M G +PD
Sbjct: 318 KNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHH 377
Query: 344 FFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEE 403
FN LI + +V +A+ V+ +M ++G+ P+ + T+I + G + A E+
Sbjct: 378 VFNILICAYAKQEKVDQAMLVFS-KMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQ 436
Query: 404 MNKLEHCKPNVQTFHPL---LKSCFKTGKTDECLSQLLD--------------------- 439
M E PN+ + L L +C K K +E + ++LD
Sbjct: 437 MID-EGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEG 495
Query: 440 ---------DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
D++ + + DI TY +I G C A K + A L M+ + P
Sbjct: 496 RVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKP 549
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 162/338 (47%), Gaps = 15/338 (4%)
Query: 155 ALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDA----VRTFDELGTFGLEKNTETMNLLL 210
AL + KG V T +++ + DA +R ELG + + N LL
Sbjct: 114 ALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCI---PDVFSYNNLL 170
Query: 211 DTLCKEGK----VELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
LC E + +EL + + PP+ ++N ++G+ K D+A T EM
Sbjct: 171 KGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDR 230
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
G P V++YS+II + C+ K E+L+ M G P+ +TY +++ SG +EA
Sbjct: 231 GILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEA 290
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
I +KM+ G +P+ ++ L+ L + R EA ++ M + G+ PD +T+ T++
Sbjct: 291 IGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFD-SMTKRGLEPDIATYRTLLQ 349
Query: 387 MFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHH 446
++ G + H L ++ +P+ F+ L+ + K K D+ + L+ + +H
Sbjct: 350 GYATKGALVE-MHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAM--LVFSKMRQHG 406
Query: 447 LSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
L+ ++ Y VI LC++ + A L F++MI +TP
Sbjct: 407 LNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTP 444
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 163/344 (47%), Gaps = 17/344 (4%)
Query: 148 RQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTF----DELGTFGLEKN 202
R D M +L M++ G I + + +++ + ++A+ D+ G G +
Sbjct: 142 RTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGG-GSPPD 200
Query: 203 TETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQ 261
+ N +L+ KEG + A S + E L I P+ T++ I CK +D+A +
Sbjct: 201 VVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLN 260
Query: 262 EMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSG 321
M +G P ++Y++I+ YC + L +M++ G PNVVTY+++M+YL K+G
Sbjct: 261 TMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNG 320
Query: 322 DFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTF 381
EA +I + M G +PD + L+ + E + + M NG+ PD F
Sbjct: 321 RSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDL-MVRNGIQPDHHVF 379
Query: 382 NTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL---SQLL 438
N +I ++ ++A V +M + PNV + ++ K+G D+ + Q++
Sbjct: 380 NILICAYAKQEKVDQAMLVFSKMRQ-HGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMI 438
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
D+ L+ +I YT +IHGLC +K + A L EM+ I
Sbjct: 439 DE-----GLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGI 477
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 156/373 (41%), Gaps = 48/373 (12%)
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC----IPPNAHTF 240
EDA FDEL G + +N L + + A S + + + P HT+
Sbjct: 37 EDARHVFDELLRRGRGASIYGLNRALADVARHSPAA-AVSRYNRMARAGAGKVTPTVHTY 95
Query: 241 NIFIHGWCKINRV------------------------------------DEAQWTIQEMK 264
I I C+ R+ D ++ M
Sbjct: 96 AILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMT 155
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM---QAQGCPPNVVTYTTVMSYLAKSG 321
GC P V SY+ +++ C + + ELL M + G PP+VV+Y TV++ K G
Sbjct: 156 ELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEG 215
Query: 322 DFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTF 381
D ++A +M G PD ++ +I L +A + +A+ V M +NGV PD T+
Sbjct: 216 DSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNT-MVKNGVMPDCMTY 274
Query: 382 NTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDM 441
N+++ + G ++A L++M + + +PNV T+ L+ K G++ E ++ D M
Sbjct: 275 NSILHGYCSSGQPKEAIGTLKKM-RSDGVEPNVVTYSSLMNYLCKNGRSTEA-RKIFDSM 332
Query: 442 VNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHM 501
K L DI TY ++ G + L M+ + I P + +++ ++
Sbjct: 333 T-KRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEK 391
Query: 502 YDAAEKIEAVMKK 514
D A + + M++
Sbjct: 392 VDQAMLVFSKMRQ 404
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 108/251 (43%), Gaps = 9/251 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++D +MD+ LL M K IVT T+ R S + +DA+ F
Sbjct: 519 YNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVS---RMDDALALFK 575
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKIN 251
E+ + G+ N T N++L L + A+ +++ + KS T+NI +HG CK N
Sbjct: 576 EMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNN 635
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
DEA Q + +++ +I + + + +L A G P+V TY+
Sbjct: 636 LTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYS 695
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYT-LGRASRVQEAVYVYQVEMP 370
+ L + G EE + M+ G DSR N ++ L R + Y++ ++
Sbjct: 696 LMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEK 755
Query: 371 ENGVAPDTSTF 381
+ T++F
Sbjct: 756 HFSLEASTASF 766
>gi|357159149|ref|XP_003578355.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Brachypodium distachyon]
Length = 857
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 163/324 (50%), Gaps = 9/324 (2%)
Query: 103 VNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK 162
V KL+H D ALG F W PG++H Y M+ ILG+ RQ MR LL EM++
Sbjct: 337 VLKLLH----DHTMALGFFHWLKRQPGFKHDGHTYTTMIGILGQARQFGIMRNLLHEMNR 392
Query: 163 GHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVEL 221
T+ T +++ + A +AV+ F+E+ G E + T L+D K G +E+
Sbjct: 393 DRCKPTVVTYNRIIHAYGRANYLREAVKVFEEMEEAGYEPDRVTYCTLIDIHAKAGYLEV 452
Query: 222 ARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQ 280
A ++ ++ + P+ T++ ++ K ++ A EM +GC P +++Y+ II
Sbjct: 453 AMDLYGRMQEVGLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIIIA 512
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
+ N+ V +L +MQ G P+ +TY+ VM L G +EA + +M+ + P
Sbjct: 513 LQAKARNYDNVVKLYRDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRRDWA-P 571
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
D + L+ G+A V +A+ Y M ++G+ P+ T N++++ F + A+ V
Sbjct: 572 DEPVYGLLVDLWGKAGNVDKALGWYHA-MLQDGLQPNVPTCNSLLSAFLKINRFQDAYSV 630
Query: 401 LEEMNKLEHCKPNVQTFHPLLKSC 424
L+ M + P++QT+ LL C
Sbjct: 631 LQNM-LAQGLVPSLQTYTLLLSCC 653
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 133/300 (44%), Gaps = 12/300 (4%)
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEA 256
G + + T ++ L + + + R++ E+ + P T+N IH + + N + EA
Sbjct: 359 GFKHDGHTYTTMIGILGQARQFGIMRNLLHEMNRDRCKPTVVTYNRIIHAYGRANYLREA 418
Query: 257 QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSY 316
+EM+ G P ++Y T+I + + +L MQ G P+ TY+ +++
Sbjct: 419 VKVFEEMEEAGYEPDRVTYCTLIDIHAKAGYLEVAMDLYGRMQEVGLSPDTFTYSAMVNC 478
Query: 317 LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
L K G A ++ +M G P+ +N +I +A V +Y+ +M G P
Sbjct: 479 LGKGGQLAAAYKLFCEMIENGCTPNLVTYNIIIALQAKARNYDNVVKLYR-DMQVAGFRP 537
Query: 377 DTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS- 435
D T++ ++ + H GH ++A V EM + P+ + L+ K G D+ L
Sbjct: 538 DKITYSIVMEVLGHCGHLDEAEAVFIEMRR--DWAPDEPVYGLLVDLWGKAGNVDKALGW 595
Query: 436 --QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
+L D L ++ T ++ + N+ + AY + + M+ + P QT L+L
Sbjct: 596 YHAMLQD-----GLQPNVPTCNSLLSAFLKINRFQDAYSVLQNMLAQGLVPSLQTYTLLL 650
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 39/205 (19%)
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
TYTT++ L ++ F + +M KP +N +I+ GRA+ ++EAV V++ E
Sbjct: 366 TYTTMIGILGQARQFGIMRNLLHEMNRDRCKPTVVTYNRIIHAYGRANYLREAVKVFE-E 424
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M E G PD T+ T+I + + G+ E A + M ++
Sbjct: 425 MEEAGYEPDRVTYCTLIDIHAKAGYLEVAMDLYGRMQEVG-------------------- 464
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
LS D TY+ +++ L + + AY LF EMI + TP T
Sbjct: 465 ------------------LSPDTFTYSAMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVT 506
Query: 489 CRLILDEVKQKHMYDAAEKIEAVMK 513
+I+ + YD K+ M+
Sbjct: 507 YNIIIALQAKARNYDNVVKLYRDMQ 531
>gi|255660936|gb|ACU25637.1| pentatricopeptide repeat-containing protein [Citharexylum
ligustrinum]
Length = 484
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/425 (25%), Positives = 207/425 (48%), Gaps = 14/425 (3%)
Query: 100 HYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEE 159
H LV ++H K + AL FRW +EH+ E + +++ILG+ +++ R +L +
Sbjct: 12 HELVYNVLHGSKKS-EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLD 70
Query: 160 MSKGHIVTLNTIAKVM-RRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
M K + + +M + AG +++V+ F ++ G+E+ ++ ++L + + G+
Sbjct: 71 MPKKGLEWDEDLWVLMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDVLFKVILRRGR 130
Query: 219 VELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
+A+ F + L I P HTFNI I G+ +V+ A ++MK P VI+Y+T
Sbjct: 131 YMMAKRYFNKMLSEGIEPTRHTFNIMIWGFFLSGKVETANRFFEDMKSRXITPDVITYNT 190
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+I Y R + + EM+ + P VVT TT++ ++A+R+ E+MK G
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTXTTLIKGYVSVDRVDDALRLXEEMKGFG 250
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP-DTSTFNTMITMFSHHGHHEK 396
KP++ ++ L+ L A ++ EA + EM + +AP D S F +I+ G+ +
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMSEARSXLK-EMVDKYIAPTDNSIFLRLISGQCKAGNLDA 309
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK-------HHLSL 449
A VL+ M +L + L+++ K G+ D+ ++ LLD ++ K L +
Sbjct: 310 AADVLQAMIRLS-VPTEAGHYGVLIENYCKAGQYDKAIN-LLDKLIEKDIILRPQSTLHM 367
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIE 509
+ Y +I LC + A L ++++ + LIL ++ A E ++
Sbjct: 368 EXIAYNPLIEYLCNNGRTAKAETLVRQLMKLGVQDSIALNTLILGHSQEGSPDSAFELLK 427
Query: 510 AVMKK 514
++++
Sbjct: 428 IMLRR 432
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 120/294 (40%), Gaps = 46/294 (15%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y M++ +V++M++ EM +I T+ T +++ + + +DA+R +E+
Sbjct: 188 YNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTXTTLIKGYVSVDRVDDALRLXEEMK 247
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRV 253
FG++ N T + LL LC K+ ARS E+ K P + F I G CK +
Sbjct: 248 GFGIKPNAITYSTLLPGLCNAEKMSEARSXLKEMVDKYIAPTDNSIFLRLISGQCKAGNL 307
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC---PPNV--- 307
D A +Q M Y +I++YC+ + K LLD++ + P +
Sbjct: 308 DAAADVLQAMIRLSVPTEAGHYGVLIENYCKAGQYDKAINLLDKLIEKDIILRPQSTLHM 367
Query: 308 --VTYTTVMSYLAKSGDFEEAIRITEKMKIVG-----------------SKPDSRFFNCL 348
+ Y ++ YL +G +A + ++ +G PDS F L
Sbjct: 368 EXIAYNPLIEYLCNNGRTAKAETLVRQLMKLGVQDSIALNTLILGHSQEGSPDSAF-ELL 426
Query: 349 IYTLGRASRVQEAVYVYQVE-----------------MPENGVAPDTSTFNTMI 385
L R ++ Y V+ M ENG PD+S F +++
Sbjct: 427 KIMLRRKIDSAKSAYDSLVQSYLKKNEPADAKAALDSMIENGHLPDSSLFRSVM 480
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 169/368 (45%), Gaps = 6/368 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAV 188
GY S Y ++ L R L + G + T ++R G+ E+AV
Sbjct: 113 GYAPSVPAYNAVLLALSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAV 172
Query: 189 RTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSV--FLELKSCIPPNAHTFNIFIHG 246
++ G N T N L+ C+ G+++ A V + + PN TFN ++G
Sbjct: 173 GVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNG 232
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
CK R++ A+ EM G P V+SY+T++ YC+ + + EM +G P+
Sbjct: 233 LCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPD 292
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
VVT+T+++ K+G+ E+A+ + +M+ G + + F LI + + +A+ +
Sbjct: 293 VVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVE 352
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
EM + G+ P +N +I + G + A ++ EM + + KP+V T+ ++ K
Sbjct: 353 -EMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREM-EAKRVKPDVVTYSTIISGYCK 410
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
G D QL M+ K L D TY+ +I GLC + A LF+ M+ + P
Sbjct: 411 VGNLDSAF-QLNQKMLKKGVLP-DAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDE 468
Query: 487 QTCRLILD 494
T ++D
Sbjct: 469 FTYTTLID 476
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 182/401 (45%), Gaps = 58/401 (14%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK----GHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
+ MV+ L K +M+ R + +EM + +V+ NT+ + + G +++ F
Sbjct: 226 FNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTL---LSGYCKVGCLHESLAVFS 282
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKIN 251
E+ GL + T L+ CK G +E A ++ +++ + N TF I G+CK
Sbjct: 283 EMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKG 342
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
+D+A ++EM+ G P V+ Y+ +I YC+ EL+ EM+A+ P+VVTY+
Sbjct: 343 FLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYS 402
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
T++S K G+ + A ++ +KM G PD+ ++ LI L R+ +A +++ M +
Sbjct: 403 TIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFE-NMLQ 461
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
GV PD T+ T+I G+ EKA + +EM + + P+V T+ L+ K+ +T
Sbjct: 462 LGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIR-KGVLPDVVTYSVLINGLSKSARTK 520
Query: 432 E------------------------------------------CLSQLLD--DMVNKHHL 447
E C+ L+ D V + L
Sbjct: 521 EAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSML 580
Query: 448 S----LDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
LD + Y+++IHG CR A K+M+ +P
Sbjct: 581 DRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSP 621
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 188/382 (49%), Gaps = 21/382 (5%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKG----HIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++V L ++++ ++ +M + VT NT+ F AG+ + A R
Sbjct: 155 YNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAA---FCRAGELDGAERVVS 211
Query: 193 ELGTFGLEK-NTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKI 250
+ G K N T N +++ LCK G++E AR VF E+ + + P+ ++N + G+CK+
Sbjct: 212 LMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKV 271
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
+ E+ EM G P V++++++I + C+ N + L+ +M+ +G N VT+
Sbjct: 272 GCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTF 331
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIY---TLGRASRVQEAVYVYQV 367
T ++ K G ++A+ E+M+ G +P +N LI LGR +E +
Sbjct: 332 TALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIR---- 387
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS-CFK 426
EM V PD T++T+I+ + G+ + AF + ++M K + P+ T+ L++ C +
Sbjct: 388 EMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLK-KGVLPDAITYSSLIRGLCEE 446
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
D C +L ++M+ + + D TYT +I G C+ E A L EMI + P
Sbjct: 447 KRLNDAC--ELFENML-QLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDV 503
Query: 487 QTCRLILDEVKQKHMYDAAEKI 508
T ++++ + + A ++
Sbjct: 504 VTYSVLINGLSKSARTKEAHRL 525
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 143/287 (49%), Gaps = 5/287 (1%)
Query: 229 LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
L+ + PN +T+NI + C R++EA + +M+G GC P ++Y+T++ ++CR
Sbjct: 144 LRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGEL 203
Query: 289 SKVYELLDEMQAQG-CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNC 347
++ M+ +G PN+VT+ ++++ L K+G E A ++ ++M G PD +N
Sbjct: 204 DGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNT 263
Query: 348 LIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKL 407
L+ + + E++ V+ EM + G+ PD TF ++I G+ E+A ++ +M +
Sbjct: 264 LLSGYCKVGCLHESLAVFS-EMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRE- 321
Query: 408 EHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKC 467
+ N TF L+ K G D+ L L + + K + + Y +I+G C+ +
Sbjct: 322 RGLRMNEVTFTALIDGFCKKGFLDDAL--LAVEEMRKCGIQPSVVCYNALINGYCKLGRM 379
Query: 468 EWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
+ A L +EM + P T I+ + D+A ++ M K
Sbjct: 380 DLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLK 426
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 112/266 (42%), Gaps = 4/266 (1%)
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
F+ I + + R A + G P V +Y+ ++ + + L M
Sbjct: 86 FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVLLAL-SDASLPSARRFLSSML 144
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
G PNV TY ++ L G EEA+ + M+ G P++ +N L+ RA +
Sbjct: 145 RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELD 204
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
A V + E P+ TFN+M+ G E A V +EM + E P+V +++
Sbjct: 205 GAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVR-EGLAPDVVSYNT 263
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
LL K G E L+ + +M + L D+ T+T +IH C+A E A L +M
Sbjct: 264 LLSGYCKVGCLHESLA-VFSEMTQRG-LVPDVVTFTSLIHATCKAGNLEQAVALVAQMRE 321
Query: 480 HDITPRYQTCRLILDEVKQKHMYDAA 505
+ T ++D +K D A
Sbjct: 322 RGLRMNEVTFTALIDGFCKKGFLDDA 347
>gi|15224671|ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
gi|75206083|sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g31400, chloroplastic; Flags: Precursor
gi|4589961|gb|AAD26479.1| unknown protein [Arabidopsis thaliana]
gi|330253448|gb|AEC08542.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
Length = 918
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/434 (24%), Positives = 203/434 (46%), Gaps = 16/434 (3%)
Query: 78 SSEDEVFQSLK---QDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEH-S 133
S +DE+F SL + +C + Y++ +L +R + D A+G + +A ++
Sbjct: 176 SGDDEMFHSLMLSFESKLCGS-DDCTYIIRELGNRNECD--KAVGFYEFAVKRERRKNEQ 232
Query: 134 SEIYEMMVDILGKVRQMDQMRALLE-EMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
++ M+ LG+ ++ + + E + G+ T+ + ++ + +G E+A+ F+
Sbjct: 233 GKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFN 292
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELAR--SVFLEL-KSCIPPNAHTFNIFIHGWCK 249
+ +GL N T N ++D C +G +E + F E+ ++ + P+ TFN + +
Sbjct: 293 SMKEYGLRPNLVTYNAVIDA-CGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSR 351
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
+ A+ EM V SY+T++ + C+ +E+L +M + PNVV+
Sbjct: 352 GGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVS 411
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM 369
Y+TV+ AK+G F+EA+ + +M+ +G D +N L+ + R +EA+ + + EM
Sbjct: 412 YSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILR-EM 470
Query: 370 PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
G+ D T+N ++ + G +++ V EM K EH PN+ T+ L+ K G
Sbjct: 471 ASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEM-KREHVLPNLLTYSTLIDGYSKGGL 529
Query: 430 TDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTC 489
E + + L D+ Y+ +I LC+ A L EM I+P T
Sbjct: 530 YKEAMEIFRE--FKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTY 587
Query: 490 RLILDEVKQKHMYD 503
I+D + D
Sbjct: 588 NSIIDAFGRSATMD 601
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 116/469 (24%), Positives = 200/469 (42%), Gaps = 39/469 (8%)
Query: 62 PRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDD--WKSALG 119
P L + +I G E + + N +QP N L+ W++A
Sbjct: 301 PNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARN 360
Query: 120 IFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRF 178
+F + E Y ++D + K QMD +L +M I+ + + + V+ F
Sbjct: 361 LFDEM-TNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGF 419
Query: 179 SGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNA 237
+ AG++++A+ F E+ G+ + + N LL K G+ E A + E+ S I +
Sbjct: 420 AKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDV 479
Query: 238 HTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDE 297
T+N + G+ K + DE + EMK P +++YST+I Y + + + E+ E
Sbjct: 480 VTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFRE 539
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
++ G +VV Y+ ++ L K+G A+ + ++M G P+ +N +I GR++
Sbjct: 540 FKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSAT 599
Query: 358 V-QEAVYVYQVEMPENGVAPDTST---FNTMITMFSH--------------HGHHEKA-- 397
+ + A Y +P + A T N +I +F G E +
Sbjct: 600 MDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCI 659
Query: 398 FHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLV 457
V +M++LE KPNV TF +L +C + ++ S LL+++ D Y V
Sbjct: 660 LEVFRKMHQLE-IKPNVVTFSAILNACSRCNSFEDA-SMLLEEL-----RLFDNKVYG-V 711
Query: 458 IHGLC---RANKCEWAYLLF---KEMIGHDITPRYQTCRLILDEVKQKH 500
+HGL R N A LF EM G + Y +L QK
Sbjct: 712 VHGLLMGQRENVWLQAQSLFDKVNEMDGSTASAFYNALTDMLWHFGQKR 760
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 121/267 (45%), Gaps = 5/267 (1%)
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
+ +V A+ + G V ++S +I +Y R + + + M+ G PN+V
Sbjct: 245 RYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLV 304
Query: 309 TYTTVMSYLAKSG-DFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
TY V+ K G +F++ + ++M+ G +PD FN L+ R + A ++
Sbjct: 305 TYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFD- 363
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKT 427
EM + D ++NT++ G + AF +L +M ++ PNV ++ ++ K
Sbjct: 364 EMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQM-PVKRIMPNVVSYSTVIDGFAKA 422
Query: 428 GKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
G+ DE L+ L +M ++LD +Y ++ + + E A + +EM I
Sbjct: 423 GRFDEALN-LFGEM-RYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVV 480
Query: 488 TCRLILDEVKQKHMYDAAEKIEAVMKK 514
T +L ++ YD +K+ MK+
Sbjct: 481 TYNALLGGYGKQGKYDEVKKVFTEMKR 507
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 92/206 (44%), Gaps = 5/206 (2%)
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
+ ++S L + G A RI E G F+ LI GR+ +EA+ V+ M
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFN-SMK 295
Query: 371 ENGVAPDTSTFNTMITMFSHHG-HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
E G+ P+ T+N +I G ++ +EM + +P+ TF+ LL C + G
Sbjct: 296 EYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQR-NGVQPDRITFNSLLAVCSRGGL 354
Query: 430 TDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTC 489
E L D+M N+ + D+ +Y ++ +C+ + + A+ + +M I P +
Sbjct: 355 W-EAARNLFDEMTNRR-IEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSY 412
Query: 490 RLILDEVKQKHMYDAAEKIEAVMKKL 515
++D + +D A + M+ L
Sbjct: 413 STVIDGFAKAGRFDEALNLFGEMRYL 438
>gi|255582955|ref|XP_002532248.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528066|gb|EEF30142.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 521
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 202/416 (48%), Gaps = 17/416 (4%)
Query: 99 SHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLE 158
SH LI R KD + AL IF G G+ H+ Y ++ L + ++ + ALL
Sbjct: 58 SHESAINLIKREKDP-QHALEIFNMVGEQKGFNHNHATYSTLIHKLAQTKKFHAVDALLH 116
Query: 159 EMS----KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEK-NTETMNLLLDTL 213
+M+ K H N +M+ F + E + F + EK + + ++ L+ L
Sbjct: 117 QMTYETCKFH---ENIFLNLMKHFYKSSLHERVLEMFYAIQPIVREKPSLKAISTCLNIL 173
Query: 214 CKEGKVELARSVFLELKS--CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM-KGHGCHP 270
+ +++LA+ L + + PN FNI + CK ++ A + EM K +P
Sbjct: 174 VESKQIDLAQKCLLYVNEHLKVRPNTCIFNILVKHHCKSGDLESALEVMHEMKKSRRSYP 233
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEMQAQG-CPPNVVTYTTVMSYLAKSGDFEEAIRI 329
VI+YST+I C + EL +EM ++ P+ +TY+ ++ G + A +I
Sbjct: 234 NVITYSTLIDGLCGNGRLKEAIELFEEMVSKDQILPDALTYSVLIKGFCHGGKADRARKI 293
Query: 330 TEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFS 389
E M+ G P+ ++ L+ + R++EA V+ EM +G+ PDT + T+I F
Sbjct: 294 MEFMRSNGCDPNVFNYSVLMNGFCKEGRLEEAKEVFD-EMKSSGLKPDTVGYTTLINCFC 352
Query: 390 HHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSL 449
G ++A +L+EM +++ CK + TF+ LLK + G+ DE L ++L+++ + + L
Sbjct: 353 GVGRIDEAMELLKEMTEMK-CKADAVTFNVLLKGLCREGRFDEAL-RMLENLAYE-GVYL 409
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
+ +Y +V++ LC+ + E + L M+ P Y T +L + + M D A
Sbjct: 410 NKGSYRIVLNFLCQKGELEKSCALLGLMLSRGFVPHYATSNELLVCLCEAGMVDNA 465
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 167/343 (48%), Gaps = 9/343 (2%)
Query: 141 VDILGKVRQMDQMRALLEEMSKGHIVTLNT--IAKVMRRFSGAGQWEDAVRTFDELGTFG 198
++IL + +Q+D + L +++ V NT +++ +G E A+ E+
Sbjct: 170 LNILVESKQIDLAQKCLLYVNEHLKVRPNTCIFNILVKHHCKSGDLESALEVMHEMKKSR 229
Query: 199 LE-KNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVDE 255
N T + L+D LC G+++ A +F E+ K I P+A T+++ I G+C + D
Sbjct: 230 RSYPNVITYSTLIDGLCGNGRLKEAIELFEEMVSKDQILPDALTYSVLIKGFCHGGKADR 289
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
A+ ++ M+ +GC P V +YS ++ +C++ + E+ DEM++ G P+ V YTT+++
Sbjct: 290 ARKIMEFMRSNGCDPNVFNYSVLMNGFCKEGRLEEAKEVFDEMKSSGLKPDTVGYTTLIN 349
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
G +EA+ + ++M + K D+ FN L+ L R R EA+ + + + GV
Sbjct: 350 CFCGVGRIDEAMELLKEMTEMKCKADAVTFNVLLKGLCREGRFDEALRMLE-NLAYEGVY 408
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS 435
+ ++ ++ G EK+ +L M P+ T + LL + G D ++
Sbjct: 409 LNKGSYRIVLNFLCQKGELEKSCALLGLMLSRGFV-PHYATSNELLVCLCEAGMVDNAVT 467
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
L + + + + ++ +I +CR K + + L E++
Sbjct: 468 ALFG--LTQMGFTPEPKSWAHLIEYICRERKLLFVFELVDELV 508
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 105/241 (43%), Gaps = 2/241 (0%)
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
+YST+I + F V LL +M + C + + +M + KS E + + +
Sbjct: 94 TYSTLIHKLAQTKKFHAVDALLHQMTYETCKFHENIFLNLMKHFYKSSLHERVLEMFYAI 153
Query: 334 K-IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
+ IV KP + + + L + ++ A V P+T FN ++ G
Sbjct: 154 QPIVREKPSLKAISTCLNILVESKQIDLAQKCLLYVNEHLKVRPNTCIFNILVKHHCKSG 213
Query: 393 HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
E A V+ EM K PNV T+ L+ G+ E + +L ++MV+K + D
Sbjct: 214 DLESALEVMHEMKKSRRSYPNVITYSTLIDGLCGNGRLKEAI-ELFEEMVSKDQILPDAL 272
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
TY+++I G C K + A + + M + P ++++ ++ + A+++ M
Sbjct: 273 TYSVLIKGFCHGGKADRARKIMEFMRSNGCDPNVFNYSVLMNGFCKEGRLEEAKEVFDEM 332
Query: 513 K 513
K
Sbjct: 333 K 333
>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
Length = 876
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 189/402 (47%), Gaps = 21/402 (5%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
G + ++ Y ++ L K +++ + ALL +M K G I + T +++ +++A
Sbjct: 377 GCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNA 436
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGW 247
R F+ + GL+ + +L D LCK G+ E A S + + + + I G+
Sbjct: 437 FRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIV--RKGVALTKVYYTTLIDGF 494
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
K D A I+ M GC P +YS ++ + C+Q ++ +LD+M +G +
Sbjct: 495 SKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTI 554
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
YT ++ + + G + A R+ +M G KP + + I + + R+++A + +
Sbjct: 555 FAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLI-L 613
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK- 426
+M GVAPD T+N +I H G+ ++AF L+ M C+PN T+ LLK K
Sbjct: 614 KMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVG-ASCEPNYWTYCLLLKHLLKG 672
Query: 427 ----------TGKTD----ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
+G + + QLL+ MV KH L+ +TTY+ +I G C+A + E A L
Sbjct: 673 NLAYVRSVDTSGMWNLIELDITWQLLERMV-KHGLNPTVTTYSSLIAGFCKAGRLEEACL 731
Query: 473 LFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
L M G ++P L++ ++ A ++M +
Sbjct: 732 LLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSE 773
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 173/351 (49%), Gaps = 9/351 (2%)
Query: 160 MSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV 219
+ +G T+ T ++ + A +++DA+R +++ + + + + L+++L K+ ++
Sbjct: 269 VKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRL 328
Query: 220 ELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTI 278
+ A+ + E+ + + PN T+ I G+CK +VD A ++ M+ GC P +Y+++
Sbjct: 329 KEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSL 388
Query: 279 IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
+ + K LL +MQ G PNV+TYTT++ DF+ A R+ E M+ G
Sbjct: 389 MYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGL 448
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
KPD + L L +A R +EA Y + V GVA + T+I FS G+ + A
Sbjct: 449 KPDEHAYAVLTDALCKAGRAEEA-YSFIV---RKGVALTKVYYTTLIDGFSKAGNTDFAA 504
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
++E M E C P+ T+ LL + K + +E L L D ++ + I YT++I
Sbjct: 505 TLIERMID-EGCTPDSYTYSVLLHALCKQKRLNEALPIL--DQMSLRGIKCTIFAYTILI 561
Query: 459 HGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE-VKQKHMYDAAEKI 508
+ R K + A ++ EM P T + ++ K+ + DA + I
Sbjct: 562 DEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLI 612
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 175/370 (47%), Gaps = 9/370 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
+ ++ L K ++ R L + M + +V ++ T ++ +S G+ DA++ + +
Sbjct: 176 FTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELME 235
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDE 255
G + T N L+ LC + E + +K P TF I+G+C + D+
Sbjct: 236 KNGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDD 295
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
A +M C + + +I S ++ + ELL+E+ A G PNV+TYT+++
Sbjct: 296 ALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIID 355
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
KSG + A+ + + M+ G +P++ +N L+Y L + ++ +A+ + +M ++G+
Sbjct: 356 GYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALL-TKMQKDGII 414
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS 435
P+ T+ T++ + AF + E M + KP+ + L + K G+ +E S
Sbjct: 415 PNVITYTTLLQGQCDEHDFDNAFRLFEMMEQ-NGLKPDEHAYAVLTDALCKAGRAEEAYS 473
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE 495
+ + ++L YT +I G +A ++A L + MI TP T ++L
Sbjct: 474 -----FIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHA 528
Query: 496 V-KQKHMYDA 504
+ KQK + +A
Sbjct: 529 LCKQKRLNEA 538
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 105/377 (27%), Positives = 166/377 (44%), Gaps = 17/377 (4%)
Query: 140 MVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGL 199
M + +G+V LL + VT NT+ K + G A R F L GL
Sbjct: 48 MTEYMGRVYSQLVQDGLLPD-----TVTYNTMIK---SYCKEGDLTTAHRYFRLLLEGGL 99
Query: 200 EKNTETMNLLLDTLCKEGKVELARSVFL--ELKSCIPPNAHTFNIFIHGWCKINRVDEAQ 257
E T T N L+ C+ G++ A +FL L C N +++ I I G C V +A
Sbjct: 100 EPETFTCNALVLGYCRTGELRKACWLFLMMPLMGC-QRNEYSYTILIQGLCDAKCVRKAL 158
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
MK GC P V +++ +I C+ L D M G P+V+TY ++
Sbjct: 159 VLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGY 218
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
+K G +A++I E M+ G PD +N LIY L + +EA + + E G P
Sbjct: 219 SKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCD-QKTEEAEELLNNAVKE-GFTPT 276
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
TF +I + + A + +M CK ++Q F L+ S K + E +L
Sbjct: 277 VVTFTNLINGYCMAEKFDDALRMKNKMMS-SKCKLDLQVFGKLINSLIKKDRLKEA-KEL 334
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCR-LILDEV 496
L++ ++ + L ++ TYT +I G C++ K + A + K M P T L+ V
Sbjct: 335 LNE-ISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLV 393
Query: 497 KQKHMYDAAEKIEAVMK 513
K K ++ A + + K
Sbjct: 394 KDKKLHKAMALLTKMQK 410
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 154/346 (44%), Gaps = 29/346 (8%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++D K D L+E M +G T + ++ + +A+ D++
Sbjct: 487 YTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMS 546
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCI-PPNAHTFNIFIHGWCKINRVD 254
G++ +L+D + +EGK + A+ ++ E+ S P+A T+ +FI+ +CK R++
Sbjct: 547 LRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLE 606
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
+A+ I +M+ G P V++Y+ +I + + L M C PN TY ++
Sbjct: 607 DAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLL 666
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV--EMPEN 372
+L K + V S S +N + E +Q+ M ++
Sbjct: 667 KHLLKG-----------NLAYVRSVDTSGMWNLI-----------ELDITWQLLERMVKH 704
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
G+ P +T++++I F G E+A +L+ M + PN + L+K C T ++
Sbjct: 705 GLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCG-KGLSPNEDIYTLLIKCCCDTKFFEK 763
Query: 433 CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
LS + ++++ + +Y L++ GLC E LF +++
Sbjct: 764 ALSFV--SIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLL 807
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 133/308 (43%), Gaps = 41/308 (13%)
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFS---KVYELLD 296
+N + + + + ++ G P ++Y+T+I+SYC++ + + + + LL
Sbjct: 36 YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLL 95
Query: 297 E--------------------------------MQAQGCPPNVVTYTTVMSYLAKSGDFE 324
E M GC N +YT ++ L +
Sbjct: 96 EGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVR 155
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTM 384
+A+ + MK G P+ R F LI L ++ RV +A ++ MP+NGV P T+N M
Sbjct: 156 KALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDA-MPQNGVVPSVMTYNAM 214
Query: 385 ITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK 444
I +S G A + E M K C P+ T++ L+ KT+E +LL++ V K
Sbjct: 215 IVGYSKLGRMNDALKIKELMEK-NGCHPDDWTYNTLIYG-LCDQKTEEA-EELLNNAV-K 270
Query: 445 HHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT-CRLILDEVKQKHMYD 503
+ + T+T +I+G C A K + A + +M+ Q +LI +K+ + +
Sbjct: 271 EGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKE 330
Query: 504 AAEKIEAV 511
A E + +
Sbjct: 331 AKELLNEI 338
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 102/260 (39%), Gaps = 44/260 (16%)
Query: 259 TIQEMKGHGCHPCVIS---YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
IQ ++ G +S Y+ ++S R + + ++ G P+ VTY T++
Sbjct: 17 AIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIK 76
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
K GD A R + G +P++ N L+ R +++A +++ + MP G
Sbjct: 77 SYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLF-LMMPLMGCQ 135
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS 435
+ ++ +I KA VL M K + C PNV+ F
Sbjct: 136 RNEYSYTILIQGLCDAKCVRKAL-VLFLMMKRDGCSPNVRAF------------------ 176
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCR-LILD 494
T +I GLC++ + A LLF M + + P T +I+
Sbjct: 177 -------------------TFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVG 217
Query: 495 EVKQKHMYDAAEKIEAVMKK 514
K M DA KI+ +M+K
Sbjct: 218 YSKLGRMNDAL-KIKELMEK 236
Score = 41.6 bits (96), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 115/302 (38%), Gaps = 61/302 (20%)
Query: 27 SSSENCSHIVSSSPIESYCSDGARLDHHQVLCVDSPR---LPDI---DVIISKVHVGSSE 80
SS S + I SYC +G RL+ + L + R PD+ +++I
Sbjct: 582 SSGHKPSATTYTVFINSYCKEG-RLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYI 640
Query: 81 DEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMM 140
D F +LK+ V + +P+++ L+ K L R +S ++ ++
Sbjct: 641 DRAFSTLKR-MVGASCEPNYWTYCLLLKHL---LKGNLAYVRSV-------DTSGMWNLI 689
Query: 141 VDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGL 199
++D LLE M K G T+ T + ++ F AG+ E+A
Sbjct: 690 --------ELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEAC----------- 730
Query: 200 EKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWT 259
LLLD +C +G + PN + + I C ++A
Sbjct: 731 --------LLLDHMCGKG---------------LSPNEDIYTLLIKCCCDTKFFEKALSF 767
Query: 260 IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK 319
+ M G P + SY ++ C + +F KV L ++ G + V + + L K
Sbjct: 768 VSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLK 827
Query: 320 SG 321
+G
Sbjct: 828 AG 829
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 166/327 (50%), Gaps = 6/327 (1%)
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIH 245
A ++ GL+ T LL+ LC + K+ A +F E+ K P+ T+ I
Sbjct: 125 AFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIK 184
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G CKI A +++M+ GC P V++Y+T+I S C+ ++ EM QG PP
Sbjct: 185 GLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPP 244
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
NVVTY++++ G EA + ++M P++ F L+ L + + EA V+
Sbjct: 245 NVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVF 304
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
++ M ENGV PD T++ ++ + ++A + + M + P+V+ ++ L+
Sbjct: 305 EM-MTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVG-KGFAPSVRVYNILINGHC 362
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
K+ + +E LL +M ++ L+ D TY+ ++ G C+A + + A LFKEM + + P
Sbjct: 363 KSRRLNEA-KTLLSEMYDRD-LTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPD 420
Query: 486 YQTCRLILDEV-KQKHMYDAAEKIEAV 511
T ++LD + K H+ +A ++A+
Sbjct: 421 SITYSILLDGLCKHGHLDEAFRLLKAM 447
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 176/360 (48%), Gaps = 6/360 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++D L K R+ ++ EM +G + T + ++ F GQ +A F ++
Sbjct: 214 YNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMI 273
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRVD 254
+ NT T +L+D LCKEG + AR VF + ++ + P+A+T++ + G+C +++D
Sbjct: 274 GRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMD 333
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EAQ M G G P V Y+ +I +C+ ++ LL EM + P+ VTY+T+M
Sbjct: 334 EAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLM 393
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
++G + A ++ ++M G PDS ++ L+ L + + EA + + M E+ +
Sbjct: 394 QGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKA-MQESKI 452
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
P +N +I + G E A + + ++ +P+V T+ ++ K G ++E
Sbjct: 453 EPHICIYNILIQGMCNFGKLEAARELFSNL-FVKGIQPSVVTYTVMISGLLKEGLSNEA- 510
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
++ MV L + TY + I G R A L +EM+G + T +++LD
Sbjct: 511 CEMFRKMVVNGCLP-NSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLD 569
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 102/419 (24%), Positives = 192/419 (45%), Gaps = 17/419 (4%)
Query: 96 IQPSHY----LVNKLIHRFKDDWK---SALGIFRWAGSCPGYEHSSEIYEMMVDILGKVR 148
I+P+ Y L+N L H +D SALG G P + ++ + K +
Sbjct: 100 IRPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTH---VTFGTLLNGLCSKAK 156
Query: 149 QMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN 207
+D ++ L +E+ K G +L T +++ G +A++ ++ G + + N
Sbjct: 157 IIDAVK-LFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYN 215
Query: 208 LLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
++D+LCK+ + A F E+ IPPN T++ +HG+C + +++EA ++M G
Sbjct: 216 TVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGR 275
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
P ++++ ++ C++ + + + M G P+ TY+ +M +EA
Sbjct: 276 NVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEA 335
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
++ + M G P R +N LI ++ R+ EA + EM + + PDT T++T++
Sbjct: 336 QKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLS-EMYDRDLTPDTVTYSTLMQ 394
Query: 387 MFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHH 446
F G + A + +EM P+ T+ LL K G DE +LL M +
Sbjct: 395 GFCQAGRPQVAQKLFKEMCSY-GLLPDSITYSILLDGLCKHGHLDEAF-RLLKAM-QESK 451
Query: 447 LSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
+ I Y ++I G+C K E A LF + I P T +++ + ++ + + A
Sbjct: 452 IEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEA 510
>gi|357123295|ref|XP_003563347.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Brachypodium distachyon]
Length = 800
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/411 (27%), Positives = 195/411 (47%), Gaps = 21/411 (5%)
Query: 114 WKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM------SKGHIVT 167
W+ AL + RW + G ++ + EM+V L + Q D + LL+EM S G V
Sbjct: 130 WEWALALVRWVRAEGGAADAAAL-EMVVRTLAREGQHDAVCDLLDEMLPLPPGSPGLDVR 188
Query: 168 LNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFL 227
T V+ S G++E A+ F EL G+ N++LD + G+ L
Sbjct: 189 AYTT--VLHALSHEGRYERALELFAELKREGVAPTHVMYNVMLDVYGRMGRSWPQIVAML 246
Query: 228 E--LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQ 285
E + + P+ T + I + VDEA +++K G PCV++Y+ ++Q + +
Sbjct: 247 EEMRAAGVEPDGFTASTVIAACGRDGLVDEAVAFFEDLKSRGHVPCVVTYNALLQVFGKA 306
Query: 286 YNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFF 345
N+ + +L EM+ GC P+ VTY + A++G +EEA + + M G P++ +
Sbjct: 307 GNYMEALRVLKEMEESGCKPDAVTYNELAGSYARAGFYEEAAKCLDTMVSKGILPNAFTY 366
Query: 346 NCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMN 405
N ++ G A +V EA+ ++ M +NG P +T+N ++ M +L EM+
Sbjct: 367 NTIMTAYGNAGKVDEALALFDW-MKKNGFIPYVNTYNLILGMLGKKSRFNVMLEMLGEMS 425
Query: 406 KLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVN-KHHLSLDITTYTLVIHGLC-- 462
+ C PN T++ +L C K G + ++++L+ M + L D + +G C
Sbjct: 426 R-SGCTPNRVTWNTMLAVCGKRG-MEGYVTRVLERMKSCGVELCRDTFNTLISAYGRCGS 483
Query: 463 RANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
RAN A+ ++ EM TP T +L + ++ + AA+ I MK
Sbjct: 484 RAN----AFKMYDEMTAAGFTPCLTTYNALLSVLSRQGDWTAAQSIINKMK 530
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 87/388 (22%), Positives = 170/388 (43%), Gaps = 38/388 (9%)
Query: 160 MSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV 219
+SKG + T +M + AG+ ++A+ FD + G T NL+L L K+ +
Sbjct: 355 VSKGILPNAFTYNTIMTAYGNAGKVDEALALFDWMKKNGFIPYVNTYNLILGMLGKKSRF 414
Query: 220 ELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTI 278
+ + E+ +S PN T+N + K ++ MK G C +++T+
Sbjct: 415 NVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEGYVTRVLERMKSCGVELCRDTFNTL 474
Query: 279 IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
I +Y R + + +++ DEM A G P + TY ++S L++ GD+ A I KMK G
Sbjct: 475 ISAYGRCGSRANAFKMYDEMTAAGFTPCLTTYNALLSVLSRQGDWTAAQSIINKMKNEGF 534
Query: 339 KPDSRFFNCLIYTLGRASR------VQEAVYVYQV------------------------- 367
KP+ ++ L+ + +++ VY V
Sbjct: 535 KPNDMSYSLLLQCHAKGGNAAGIEAIEKEVYEGTVFPSWVILRTLVISNFKCRRLEGIER 594
Query: 368 ---EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
E+ G PD FN+M++M++ +G + KA + + + K P++ T++ ++
Sbjct: 595 AFQEVMARGHKPDLVIFNSMLSMYAKNGMYRKAGEMFDSI-KQGGLSPDLITYNSMMDMY 653
Query: 425 FKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
K+ ++ E ++ + + L D+ +Y V++G C+ + A + EMI + P
Sbjct: 654 AKSNESWE--AEKILKRLKTSQLKPDVVSYNTVMNGFCKQGLIKEAQRILSEMIADGVRP 711
Query: 485 RYQTCRLILDEVKQKHMYDAAEKIEAVM 512
T ++ + M+ A ++ + M
Sbjct: 712 CVVTYHTLVGGYASREMFSEAREVVSYM 739
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 161/358 (44%), Gaps = 11/358 (3%)
Query: 162 KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVEL 221
K ++ + +++ +G WE A+ + G + + +++ TL +EG+ +
Sbjct: 108 KDDLLRAADVPSLLKALELSGHWEWALALVRWVRAEGGAADAAALEMVVRTLAREGQHDA 167
Query: 222 ARSVFLELKSCIPPNA-----HTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYS 276
+ E+ +PP + + +H R + A E+K G P + Y+
Sbjct: 168 VCDLLDEMLP-LPPGSPGLDVRAYTTVLHALSHEGRYERALELFAELKREGVAPTHVMYN 226
Query: 277 TIIQSYCRQ-YNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKI 335
++ Y R ++ ++ +L+EM+A G P+ T +TV++ + G +EA+ E +K
Sbjct: 227 VMLDVYGRMGRSWPQIVAMLEEMRAAGVEPDGFTASTVIAACGRDGLVDEAVAFFEDLKS 286
Query: 336 VGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHE 395
G P +N L+ G+A EA+ V + EM E+G PD T+N + ++ G +E
Sbjct: 287 RGHVPCVVTYNALLQVFGKAGNYMEALRVLK-EMEESGCKPDAVTYNELAGSYARAGFYE 345
Query: 396 KAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYT 455
+A L+ M + PN T++ ++ + GK DE L+ L D + K+ + TY
Sbjct: 346 EAAKCLDTMVS-KGILPNAFTYNTIMTAYGNAGKVDEALA--LFDWMKKNGFIPYVNTYN 402
Query: 456 LVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
L++ L + ++ + EM TP T +L ++ M ++ MK
Sbjct: 403 LILGMLGKKSRFNVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEGYVTRVLERMK 460
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 91/183 (49%), Gaps = 2/183 (1%)
Query: 146 KVRQMDQM-RALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTE 204
K R+++ + RA E M++GH L ++ ++ G + A FD + GL +
Sbjct: 585 KCRRLEGIERAFQEVMARGHKPDLVIFNSMLSMYAKNGMYRKAGEMFDSIKQGGLSPDLI 644
Query: 205 TMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
T N ++D K + A + LK S + P+ ++N ++G+CK + EAQ + EM
Sbjct: 645 TYNSMMDMYAKSNESWEAEKILKRLKTSQLKPDVVSYNTVMNGFCKQGLIKEAQRILSEM 704
Query: 264 KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF 323
G PCV++Y T++ Y + FS+ E++ M + P +TY V+ K+ F
Sbjct: 705 IADGVRPCVVTYHTLVGGYASREMFSEAREVVSYMIQRNLSPMELTYRRVVDSYCKAKRF 764
Query: 324 EEA 326
+EA
Sbjct: 765 DEA 767
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 117/263 (44%), Gaps = 10/263 (3%)
Query: 111 KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI----V 166
+ DW +A I + G++ + Y +++ K + A+ +E+ +G + V
Sbjct: 516 QGDWTAAQSIINKMKN-EGFKPNDMSYSLLLQCHAKGGNAAGIEAIEKEVYEGTVFPSWV 574
Query: 167 TLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF 226
L T+ V+ F + E R F E+ G + + N +L K G A +F
Sbjct: 575 ILRTL--VISNFK-CRRLEGIERAFQEVMARGHKPDLVIFNSMLSMYAKNGMYRKAGEMF 631
Query: 227 LELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQ 285
+K + P+ T+N + + K N EA+ ++ +K P V+SY+T++ +C+Q
Sbjct: 632 DSIKQGGLSPDLITYNSMMDMYAKSNESWEAEKILKRLKTSQLKPDVVSYNTVMNGFCKQ 691
Query: 286 YNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFF 345
+ +L EM A G P VVTY T++ A F EA + M P +
Sbjct: 692 GLIKEAQRILSEMIADGVRPCVVTYHTLVGGYASREMFSEAREVVSYMIQRNLSPMELTY 751
Query: 346 NCLIYTLGRASRVQEA-VYVYQV 367
++ + +A R EA ++Y++
Sbjct: 752 RRVVDSYCKAKRFDEARGFLYEI 774
>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
Length = 734
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 192/397 (48%), Gaps = 12/397 (3%)
Query: 117 ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVM 175
A+G+ R S G Y ++ L ++D+ L+ EM + I + + ++
Sbjct: 134 AVGLLRSMRSA-GVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLL 192
Query: 176 RRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIP 234
+ + +G+WED + F E+ G+E + L+D+LCK GK + A V + ++ +
Sbjct: 193 QGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLE 252
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYEL 294
PN T+N+ I+ CK V EA +++M G P V++Y+T+I+ + L
Sbjct: 253 PNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWL 312
Query: 295 LDEMQAQG---CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYT 351
L+EM +G PNVVT+ +V+ L G +A ++ M+ G + +N LI
Sbjct: 313 LEEM-VRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGG 371
Query: 352 LGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCK 411
L R +V++A+ + EM G+ PD+ T++ +I F ++A +L M +
Sbjct: 372 LLRVHKVRKAMELMD-EMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRD-RGIE 429
Query: 412 PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAY 471
P + + PLL + + G + L ++M N + LD+ Y+ +IHG C+A + A
Sbjct: 430 PELFHYIPLLVAMCEQGMMERA-RNLFNEMDN--NFPLDVVAYSTMIHGACKAGDLKTAK 486
Query: 472 LLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
L K ++ +TP T ++++ + +AA +
Sbjct: 487 ELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGV 523
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 151/314 (48%), Gaps = 7/314 (2%)
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSC 232
+MR + AV + + G+ + T L+ LC +V+ A + E+ +S
Sbjct: 121 LMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESG 180
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
I PN ++ + G+CK R ++ EM G P V+ Y+ +I S C+ K +
Sbjct: 181 IEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAH 240
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
++D M +G PNVVTY +++ + K G +EAI + +KM G PD +N LI L
Sbjct: 241 GVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGL 300
Query: 353 GRASRVQEAVYVYQVEM--PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHC 410
+ EA+++ + EM +N V P+ TFN++I G +AF V M + C
Sbjct: 301 SDVLEMDEAMWLLE-EMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEE-TGC 358
Query: 411 KPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWA 470
N+ T++ L+ + K + + +L+D+M + L D TY+++I G C+ + + A
Sbjct: 359 MVNLVTYNLLIGGLLRVHKVRKAM-ELMDEMTS-LGLEPDSFTYSILIKGFCKMWQVDRA 416
Query: 471 YLLFKEMIGHDITP 484
L M I P
Sbjct: 417 EDLLSTMRDRGIEP 430
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 161/353 (45%), Gaps = 43/353 (12%)
Query: 201 KNTETMNLLLDTLCKEG----KVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEA 256
++ + N +L LC+ G L R++ LE PNA ++ + + C D+A
Sbjct: 75 RDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQA 134
Query: 257 QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSY 316
++ M+ G V++Y T+I+ C K EL+ EM G PNVV Y++++
Sbjct: 135 VGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQG 194
Query: 317 LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL---GRASR---------------- 357
KSG +E+ ++ +M G +PD + LI +L G+A +
Sbjct: 195 YCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPN 254
Query: 358 ----------------VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVL 401
V+EA+ V + +M E GVAPD T+NT+I S ++A +L
Sbjct: 255 VVTYNVLINCMCKEGSVKEAIGVLK-KMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLL 313
Query: 402 EEMNKLEH-CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHG 460
EEM + ++ KPNV TF+ +++ G+ + + M+ + +++ TY L+I G
Sbjct: 314 EEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQ--VRAMMEETGCMVNLVTYNLLIGG 371
Query: 461 LCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
L R +K A L EM + P T +++ + D AE + + M+
Sbjct: 372 LLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMR 424
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/416 (21%), Positives = 183/416 (43%), Gaps = 51/416 (12%)
Query: 94 NAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMD 151
+ I+P+ + + L+ + W+ +F S G E +Y ++D L KV +
Sbjct: 179 SGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEM-SEKGIEPDVVMYTGLIDSLCKVGKAK 237
Query: 152 QMRALLEEMSK----GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN 207
+ +++ M + ++VT N + M + G ++A+ ++ G+ + T N
Sbjct: 238 KAHGVMDMMVRRGLEPNVVTYNVLINCMCK---EGSVKEAIGVLKKMSEKGVAPDVVTYN 294
Query: 208 LLLDTLCKEGKVELARSVFLEL---KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
L+ L +++ A + E+ K+ + PN TFN I G C I R+ +A M+
Sbjct: 295 TLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMME 354
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
GC +++Y+ +I R + K EL+DEM + G P+ TY+ ++ K +
Sbjct: 355 ETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVD 414
Query: 325 EAIRITEKMKIVGSKP----------------------------DSRF------FNCLIY 350
A + M+ G +P D+ F ++ +I+
Sbjct: 415 RAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIH 474
Query: 351 TLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHC 410
+A ++ A + + + + G+ PD T++ +I MF+ G E A VL++M
Sbjct: 475 GACKAGDLKTAKELLK-SIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTA-SGF 532
Query: 411 KPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANK 466
P+V F L++ G+ ++ L +L+ +M+ K +++LD + + L +N+
Sbjct: 533 LPDVAVFDSLIQGYSTKGEINKVL-ELIREMITK-NIALDSKIISTLSTSLVASNE 586
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 165/344 (47%), Gaps = 42/344 (12%)
Query: 196 TFGLEKNTETMNLLLDTLCKEGK-VELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRV 253
++G + N +LD + + + V++A +F E+ +S + PN +T+NI I G+C +
Sbjct: 160 SYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNL 219
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
+ + EM+ +GC P V++Y+TII +YC+ + ++LL M +G PN+++Y V
Sbjct: 220 EMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVV 279
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
++ L + G +E I E+M PD FN LI +A+ V EM +NG
Sbjct: 280 INGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQAL-VLHAEMVKNG 338
Query: 374 VAPDTSTFNTMITM-----------------------------------FSHHGHHEKAF 398
++P+ T+ T+I FS G ++A+
Sbjct: 339 LSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAY 398
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
+++EM + P + T++ L+ G+ ++ S LL +M+ + + D+ +Y+ +I
Sbjct: 399 QIMKEMVE-NGFTPTIITYNALINGHCILGRMEDA-SGLLQEMIERGFIP-DVVSYSTII 455
Query: 459 HGLCRANKCEWAYLLFKEMIGHDITPRYQT-CRLILDEVKQKHM 501
G CR + E A+ L EM+ I+P T LI KQ+ +
Sbjct: 456 SGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRL 499
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 101/440 (22%), Positives = 201/440 (45%), Gaps = 15/440 (3%)
Query: 62 PRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIF 121
P + + I+ V ++ + + ++ V + + P+ Y N LI F +G+F
Sbjct: 165 PGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLF 224
Query: 122 RWA-----GSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVM 175
+ G P + Y ++D K+R++ + LL M+ KG L + V+
Sbjct: 225 FFGEMERNGCLP----NVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVI 280
Query: 176 RRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIP 234
GQ ++ +E+ + T N L++ C G A + E+ K+ +
Sbjct: 281 NGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLS 340
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYEL 294
PN T+ I+ CK ++ A + +M+ G HP +Y+T+I + +Q + Y++
Sbjct: 341 PNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQI 400
Query: 295 LDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGR 354
+ EM G P ++TY +++ G E+A + ++M G PD ++ +I R
Sbjct: 401 MKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCR 460
Query: 355 ASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNV 414
+++A + +VEM G++PD +T++++I + + +EM L P+
Sbjct: 461 NQELEKA-FQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSL-GLPPDE 518
Query: 415 QTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLF 474
T+ L+ + G D+ L +L D+M+ K S DI TY ++I+G + ++ + A L
Sbjct: 519 VTYTSLINAYCIEGDLDKAL-RLHDEMIQK-GFSPDIVTYNVLINGFNKQSRTKEAKRLL 576
Query: 475 KEMIGHDITPRYQTCRLILD 494
+++ + P T ++D
Sbjct: 577 LKLLYEESVPNEITYNTLID 596
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 174/375 (46%), Gaps = 31/375 (8%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +++ + K +++ L++M +G T ++ FS G + A + E+
Sbjct: 346 YTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMV 405
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
G T N L++ C G++E A + E+ + P+ +++ I G+C+ ++
Sbjct: 406 ENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELE 465
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
+A EM G P V +YS++IQ C+Q +V +L EM + G PP+ VTYT+++
Sbjct: 466 KAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLI 525
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
+ GD ++A+R+ ++M G PD +N LI + SR +EA + + E V
Sbjct: 526 NAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESV 585
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
P+ T+NT+I + N LE ++ L+K G +E
Sbjct: 586 -PNEITYNTLI----------------DNCNNLEF-----KSALALMKGFCMKGLMNEA- 622
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
++L+ M+ K + L+ Y ++IHG + E AY L+KEM+ P T +
Sbjct: 623 DRVLESMLQKGY-KLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMAL-- 679
Query: 495 EVKQKHMYDAAEKIE 509
K +Y +++E
Sbjct: 680 ---AKSLYHEGKEVE 691
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 130/274 (47%), Gaps = 5/274 (1%)
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE-L 294
++ F++ + ++N +++A + K +G P V+SY+ I+ + R K+ E +
Sbjct: 131 SSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGI 190
Query: 295 LDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGR 354
EM G PNV TY ++ +G+ E + +M+ G P+ +N +I +
Sbjct: 191 FKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCK 250
Query: 355 ASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNV 414
++ EA + ++ M G+ P+ ++N +I G ++ +LEEM+K + P+
Sbjct: 251 LRKIGEAFKLLRL-MALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYV-PDR 308
Query: 415 QTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLF 474
TF+ L+ G + L L +MV K+ LS ++ TYT +I+ +C+A A
Sbjct: 309 VTFNTLINGYCNVGNFHQALV-LHAEMV-KNGLSPNVVTYTTLINSMCKAGNLNRAMEFL 366
Query: 475 KEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+M + P +T ++D Q+ A +I
Sbjct: 367 DQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQI 400
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 9/185 (4%)
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRAS---RVQ 359
C + + V+ A+ +A+ I K G P +N ++ + R ++
Sbjct: 128 CKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIA 187
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
E ++ EM E+GV+P+ T+N +I F G+ E EM + C PNV T++
Sbjct: 188 EGIFK---EMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMER-NGCLPNVVTYNT 243
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
++ + K K E +LL M K L+ ++ +Y +VI+GLCR + + + +EM
Sbjct: 244 IIDAYCKLRKIGEAF-KLLRLMALK-GLNPNLISYNVVINGLCREGQMKETSEILEEMSK 301
Query: 480 HDITP 484
P
Sbjct: 302 RRYVP 306
>gi|326490553|dbj|BAJ84940.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 856
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 165/327 (50%), Gaps = 15/327 (4%)
Query: 103 VNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS- 161
V KL+H D ALG F W PG++H Y M+ ILG+ +Q MR LL+EMS
Sbjct: 336 VLKLLH----DHNIALGFFHWLKRQPGFKHDGHTYTTMIGILGQAKQFGTMRKLLDEMSS 391
Query: 162 ---KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
K +VT N +++ + A +AV+ F+E+ G + + T L+D K G
Sbjct: 392 VNCKPTVVTYN---RIIHAYGRANYLREAVKVFEEMEGAGYQPDRVTYCTLIDIHAKSGY 448
Query: 219 VELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
+E+A ++ ++ + P+ T++ ++ K ++ A EM +GC P +++Y+
Sbjct: 449 LEVAMDLYGRMQEVGLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEMIDNGCTPNLVTYNI 508
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
II + N+ V +L +MQ G P+ +TY+ VM L G +EA + +M+
Sbjct: 509 IIALQAKARNYDNVVKLYRDMQIAGFRPDKITYSIVMEVLGHCGHLDEAEAVFLEMRRDW 568
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKA 397
+ PD + L+ G+A V +A+ Y M ++G+ P+ T N++++ F + A
Sbjct: 569 A-PDEPVYGLLVDLWGKAGNVDKALGWYHA-MLQDGLQPNVPTCNSLLSAFLKLNRFQDA 626
Query: 398 FHVLEEMNKLEHCKPNVQTFHPLLKSC 424
+ VL+ M + P++QT+ LL C
Sbjct: 627 YGVLQNM-LAQGLVPSLQTYTLLLSCC 652
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 132/300 (44%), Gaps = 12/300 (4%)
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEA 256
G + + T ++ L + + R + E+ S P T+N IH + + N + EA
Sbjct: 358 GFKHDGHTYTTMIGILGQAKQFGTMRKLLDEMSSVNCKPTVVTYNRIIHAYGRANYLREA 417
Query: 257 QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSY 316
+EM+G G P ++Y T+I + + +L MQ G P+ TY+ +++
Sbjct: 418 VKVFEEMEGAGYQPDRVTYCTLIDIHAKSGYLEVAMDLYGRMQEVGLSPDTFTYSAMVNC 477
Query: 317 LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
L K G A ++ +M G P+ +N +I +A V +Y+ +M G P
Sbjct: 478 LGKGGQLAAAYKLFCEMIDNGCTPNLVTYNIIIALQAKARNYDNVVKLYR-DMQIAGFRP 536
Query: 377 DTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS- 435
D T++ ++ + H GH ++A V EM + P+ + L+ K G D+ L
Sbjct: 537 DKITYSIVMEVLGHCGHLDEAEAVFLEMRR--DWAPDEPVYGLLVDLWGKAGNVDKALGW 594
Query: 436 --QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
+L D L ++ T ++ + N+ + AY + + M+ + P QT L+L
Sbjct: 595 YHAMLQD-----GLQPNVPTCNSLLSAFLKLNRFQDAYGVLQNMLAQGLVPSLQTYTLLL 649
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 88/205 (42%), Gaps = 39/205 (19%)
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
TYTT++ L ++ F ++ ++M V KP +N +I+ GRA+ ++EAV V++ E
Sbjct: 365 TYTTMIGILGQAKQFGTMRKLLDEMSSVNCKPTVVTYNRIIHAYGRANYLREAVKVFE-E 423
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M G PD T+ T+I + + G+ E A + M ++
Sbjct: 424 MEGAGYQPDRVTYCTLIDIHAKSGYLEVAMDLYGRMQEVG-------------------- 463
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
LS D TY+ +++ L + + AY LF EMI + TP T
Sbjct: 464 ------------------LSPDTFTYSAMVNCLGKGGQLAAAYKLFCEMIDNGCTPNLVT 505
Query: 489 CRLILDEVKQKHMYDAAEKIEAVMK 513
+I+ + YD K+ M+
Sbjct: 506 YNIIIALQAKARNYDNVVKLYRDMQ 530
>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
Length = 602
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 161/335 (48%), Gaps = 10/335 (2%)
Query: 173 KVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC 232
+++R G+ +DA R +G G L D C+ G++ AR V +
Sbjct: 108 RLVRDLCRRGRPDDAERV---VGACGPAATVVAYGALTDGYCRAGRLGDARRVVGGMP-- 162
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
+ PNA+T+N IH C+ +V +A + +M GC P V++Y+ ++++ C+ + +
Sbjct: 163 VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 222
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
EL+D M+A+GC PN VTY +M + GD ++A+ + + G KP + +N ++ L
Sbjct: 223 ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 282
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
A R +A + EM P+ +TFN +I G ++A +LE+M+K C
Sbjct: 283 CSAERWGDADELV-TEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSK-HGCTA 340
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
N+ T++ ++ + D + LL M + DI TY ++ GLC A + A
Sbjct: 341 NIVTYNAIINGLCEQRNVDGAMG-LLSKM-KSYGCKPDIVTYNTLLKGLCSAAQWVDAEE 398
Query: 473 LFKEMIGHDITPRYQTCRLILDEVKQKH-MYDAAE 506
L M + P T ++ + QK M DA E
Sbjct: 399 LMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIE 433
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 107/406 (26%), Positives = 186/406 (45%), Gaps = 20/406 (4%)
Query: 103 VNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK 162
++ L+HR D +AL R S P ++ ++ D+ + R D R + +
Sbjct: 78 LSALVHR--GDLDAAL---RLVESSPRPPDAALANRLVRDLCRRGRPDDAERVV---GAC 129
Query: 163 GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELA 222
G T+ + + AG+ DA R +G ++ N T N L+ TLC+ G+V A
Sbjct: 130 GPAATVVAYGALTDGYCRAGRLGDARRV---VGGMPVQPNAYTYNPLIHTLCERGQVRDA 186
Query: 223 RSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQ 280
SV ++ + C P + T+NI + CK +A I M+ GC P ++Y+ ++
Sbjct: 187 LSVLDDMLCRGCAP-DVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMD 245
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
C + + ELL + + GC P+ V Y TV+ L + + +A + +M P
Sbjct: 246 GMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPP 305
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
+ FN +IY+L R +Q+A+ + + +M ++G + T+N +I + + A +
Sbjct: 306 NEATFNVVIYSLCRKGLLQQAIQLLE-KMSKHGCTANIVTYNAIINGLCEQRNVDGAMGL 364
Query: 401 LEEMNKLEHCKPNVQTFHPLLKS-CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIH 459
L +M K CKP++ T++ LLK C D +L+D+M L D T+ +I
Sbjct: 365 LSKM-KSYGCKPDIVTYNTLLKGLCSAAQWVDA--EELMDNMTQNGCLP-DNVTFNTLIG 420
Query: 460 GLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
LC+ A +FK+M TP T I+ + + D A
Sbjct: 421 FLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQA 466
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 104/453 (22%), Positives = 199/453 (43%), Gaps = 25/453 (5%)
Query: 42 ESYCSDGARLDHHQVLCVDSPRLPDIDVIISKVHVGSSEDEVFQSLK--QDHVCNAIQPS 99
+ YC G RL + + P P+ +H +V +L D +C P
Sbjct: 143 DGYCRAG-RLGDARRVVGGMPVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPD 201
Query: 100 HYLVNKLIH-----RFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMR 154
N L+ R + + R G P ++ Y +++D + +D
Sbjct: 202 VVTYNILLEATCKGRGYRQAMELIDLMRAEGCTP----NNVTYNVLMDGMCGEGDVDDAL 257
Query: 155 ALLEEMS----KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLL 210
LL + K V NT V++ A +W DA E+ N T N+++
Sbjct: 258 ELLRNLPSHGCKPSTVNYNT---VLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVI 314
Query: 211 DTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCH 269
+LC++G ++ A + ++ K N T+N I+G C+ VD A + +MK +GC
Sbjct: 315 YSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCK 374
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI 329
P +++Y+T+++ C + EL+D M GC P+ VT+ T++ +L + G +AI +
Sbjct: 375 PDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEV 434
Query: 330 TEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFS 389
++M G P+S ++ +I L +A+++ +A+ ++ EM G PD + + +
Sbjct: 435 FKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFN-EMGHKGFNPD-KIYQLLAECLN 492
Query: 390 HHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSL 449
E+A + ++ P+ ++ +L + GKT+ + ++ MV+ +
Sbjct: 493 DDDTIEEAIQTVRKLQD-SGISPHTVLYNAILLGLCRNGKTEFAI-DIMAYMVSSGCMPD 550
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
D+ TY ++I GL A L ++ D+
Sbjct: 551 DL-TYVILIEGLAYEGYLNEARELLIKLCSRDV 582
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 135/306 (44%), Gaps = 38/306 (12%)
Query: 234 PPNAHTFNIFIHGWCKINRVDEAQWTI-----------------------------QEMK 264
PP+A N + C+ R D+A+ + + +
Sbjct: 100 PPDAALANRLVRDLCRRGRPDDAERVVGACGPAATVVAYGALTDGYCRAGRLGDARRVVG 159
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
G P +Y+ +I + C + +LD+M +GC P+VVTY ++ K +
Sbjct: 160 GMPVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYR 219
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTM 384
+A+ + + M+ G P++ +N L+ + V +A+ + + +P +G P T +NT+
Sbjct: 220 QAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLR-NLPSHGCKPSTVNYNTV 278
Query: 385 ITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK 444
+ A ++ EM + E+C PN TF+ ++ S + G + + QLL+ M +K
Sbjct: 279 LKGLCSAERWGDADELVTEMLR-ENCPPNEATFNVVIYSLCRKGLLQQAI-QLLEKM-SK 335
Query: 445 HHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDA 504
H + +I TY +I+GLC + A L +M + P T +L K + A
Sbjct: 336 HGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLL-----KGLCSA 390
Query: 505 AEKIEA 510
A+ ++A
Sbjct: 391 AQWVDA 396
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 81/196 (41%), Gaps = 13/196 (6%)
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRV 358
Q Q P ++ +S L GD + A+R+ E PD+ N L+ L R R
Sbjct: 63 QQQQAPRRLLGSDRRLSALVHRGDLDAALRLVESSP---RPPDAALANRLVRDLCRRGRP 119
Query: 359 QEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFH 418
+A V P V + + + G A V+ M +PN T++
Sbjct: 120 DDAERVVGACGPAATVV----AYGALTDGYCRAGRLGDARRVVGGM----PVQPNAYTYN 171
Query: 419 PLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
PL+ + + G+ + LS +LDDM+ + + D+ TY +++ C+ A L M
Sbjct: 172 PLIHTLCERGQVRDALS-VLDDMLCR-GCAPDVVTYNILLEATCKGRGYRQAMELIDLMR 229
Query: 479 GHDITPRYQTCRLILD 494
TP T +++D
Sbjct: 230 AEGCTPNNVTYNVLMD 245
>gi|326491875|dbj|BAJ98162.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/395 (25%), Positives = 176/395 (44%), Gaps = 46/395 (11%)
Query: 120 IFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI--VTLNTIAKVMRR 177
FRWA YEH + Y ++ L V Q +M +++EM + + VT ++ ++R
Sbjct: 105 FFRWAARKRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPVCVVTPMELSDIIRM 164
Query: 178 FSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS---CIP 234
A AV F ++ + N ++ L EG+ E ++ E+ + C P
Sbjct: 165 LGNAKMISKAVAIFYQIKARKCQPTAHAYNSMIIMLMHEGEYEKVHELYNEMSNEGQCFP 224
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYEL 294
+ T++ I +CK+ R D A W + EMK +G P Y+ ++ + N L
Sbjct: 225 -DTVTYSALISAFCKLGRQDSAIWLLNEMKDNGMQPTAKIYTMLMALLFKLDNVHGALGL 283
Query: 295 LDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGR 354
+EM+ Q C P+V TYT ++ L K+G +EA +M+ G +PD+ N +I LG+
Sbjct: 284 FEEMRHQYCRPDVFTYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFLGK 343
Query: 355 ASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNV 414
A R+ +A+ +++ EM L C P+V
Sbjct: 344 AGRLDDAIKLFE------------------------------------EMETL-RCIPSV 366
Query: 415 QTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLF 474
T++ ++K+ F++ +S + M +S TY+++I G C+ N+ E A +L
Sbjct: 367 VTYNTIIKALFESKSRVSEISSWFERM-KGSGISPSPFTYSILIDGFCKTNRTEKAMMLL 425
Query: 475 KEMIGHDITP-RYQTCRLILDEVKQKHMYDAAEKI 508
+EM P C LI D + + YD A ++
Sbjct: 426 EEMDEKGFPPCPAAYCSLI-DALGKAKRYDLANEL 459
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 186/381 (48%), Gaps = 16/381 (4%)
Query: 94 NAIQPSHYLVNKLIHR-FK-DDWKSALGIF---RWAGSCPGYEHSSEIYEMMVDILGKVR 148
N +QP+ + L+ FK D+ ALG+F R P +E+ + LGK
Sbjct: 255 NGMQPTAKIYTMLMALLFKLDNVHGALGLFEEMRHQYCRPDVFTYTEL----IRGLGKAG 310
Query: 149 QMDQMRALLEEMSKGHIVTLNTIAKVMRRFSG-AGQWEDAVRTFDELGTFGLEKNTETMN 207
++D+ EM + + M F G AG+ +DA++ F+E+ T + T N
Sbjct: 311 RLDEAYNFFHEMRREGCRPDTVLMNNMINFLGKAGRLDDAIKLFEEMETLRCIPSVVTYN 370
Query: 208 LLLDTLCK-EGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKG 265
++ L + + +V S F +K S I P+ T++I I G+CK NR ++A ++EM
Sbjct: 371 TIIKALFESKSRVSEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDE 430
Query: 266 HGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEE 325
G PC +Y ++I + + + EL E++ + Y ++ +L K+G ++
Sbjct: 431 KGFPPCPAAYCSLIDALGKAKRYDLANELFQELKENCGSSSARVYAVMIKHLGKAGRLDD 490
Query: 326 AIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMI 385
A+ + ++M +G P+ +N L+ L RA + EA+ + M ++G PD +++N ++
Sbjct: 491 AVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEALTTMR-RMQDHGCIPDINSYNIIL 549
Query: 386 TMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKH 445
+ G ++A +L M K KP+ +++ +L + G +E ++L+ +M N
Sbjct: 550 NALAKTGGPDRAMGMLCNM-KQSAIKPDAVSYNTVLGALSHAGMFEEA-AKLMKEM-NAI 606
Query: 446 HLSLDITTYTLVIHGLCRANK 466
D+ TY+ ++ + + ++
Sbjct: 607 GFDYDLITYSSILEAIGKVDQ 627
>gi|413934035|gb|AFW68586.1| hypothetical protein ZEAMMB73_127077 [Zea mays]
Length = 800
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 123/477 (25%), Positives = 208/477 (43%), Gaps = 30/477 (6%)
Query: 37 SSSPIESYCSDGARLDHHQVLCVDSPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAI 96
S+ P+ + G L H +L P LP + +S + + V +L +C+A+
Sbjct: 29 SALPLAAELEAGDAL--HALLSTLPPSLPSLFPCLSLLSRRLTPHSVADAL----LCDAL 82
Query: 97 QPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRAL 156
P+ + L +S L HS + +++ D A+
Sbjct: 83 PPASRIRLFLFSALTPRLRSPL------------LHSRAVVPILLATDADAAMYD---AI 127
Query: 157 LEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL-GTFGLEKNTETMNLLLDTLCK 215
+ + G ++ + AG+ +AV F + G FG T N +L L
Sbjct: 128 ADAQAAGLQPPTAAFEALIFAHASAGRHHEAVEAFSRMEGEFGCRPTTFVYNAVLRVLVA 187
Query: 216 EG-KVELARSVF--LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCV 272
G V LA +++ + C+P N T+N+ IHG CK +A EM G P V
Sbjct: 188 SGGAVPLALALYNRMVAAGCLP-NRATYNVLIHGLCKRGTPVDALKLFDEMISRGITPNV 246
Query: 273 ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEK 332
+++ ++ S C + LL M+ +GCPP+ VTY +S L K+G +EAI E
Sbjct: 247 KTHTILLSSMCNAGQLKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEA 306
Query: 333 MKIVGS-KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHH 391
++ G+ + ++CLI L A R +E Y + + V+PD + MI +
Sbjct: 307 LRHTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADVSPDIVLYTIMIRGCAEA 366
Query: 392 GHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDI 451
G AF +EM K + P+ ++ LLK+ G D S L+ +MV ++++ LDI
Sbjct: 367 GRTNDAFAFFDEM-KEKGFTPDTFCYNTLLKALCDAGDLDGARS-LMSEMV-RNNVVLDI 423
Query: 452 TTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
TYT +I GLC+ + A +F M+ P T +++D + + H + A +
Sbjct: 424 HTYTTMIIGLCKEQLVDEAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEARML 480
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 171/384 (44%), Gaps = 64/384 (16%)
Query: 156 LLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK 215
+LE+ + L TI ++R + AG+ DA FDE+ G +T N LL LC
Sbjct: 343 VLEQADVSPDIVLYTI--MIRGCAEAGRTNDAFAFFDEMKEKGFTPDTFCYNTLLKALCD 400
Query: 216 EGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVIS 274
G ++ ARS+ E+ ++ + + HT+ I G CK VDEA M GCHP V++
Sbjct: 401 AGDLDGARSLMSEMVRNNVVLDIHTYTTMIIGLCKEQLVDEAMQVFDGMVEVGCHPSVMT 460
Query: 275 YSTII------------------------------------------------QSYCRQY 286
Y+ +I +S C+
Sbjct: 461 YNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVRDSETLQKLVESMCQSG 520
Query: 287 NFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFN 346
K Y+LL + G P+VVTY T+++ L K + + A+R+ ++++ G D +
Sbjct: 521 QVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFPLDEITYG 580
Query: 347 CLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV-LEEMN 405
LI +L RA R +A+ ++Q ++ +G P +N+M+ +A ++ + +
Sbjct: 581 TLIDSLLRAHRYNDALTLFQ-DILHSGGTPSMPIYNSMMRSLCRMQKLSQAINLWFDHLP 639
Query: 406 KLEHCKPNVQTFHPLLKSC---FKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC 462
+ K N+ ++ S F+ G E + +L+ +++ + S++ YT+ + GL
Sbjct: 640 R----KYNLLAQDEVISSARKKFEEGCLHEAVRELIK--IDQEYGSVNSCPYTIWLIGLI 693
Query: 463 RANKCEWAYLLFK--EMIGHDITP 484
+A + E A +F E G DITP
Sbjct: 694 QAGRIEDALKIFHILEESGIDITP 717
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 143/321 (44%), Gaps = 22/321 (6%)
Query: 181 AGQWEDAVRTFDEL---GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPP 235
AG+ ++A+ + L GTF L + + L+D L G+ E ++E+ ++ + P
Sbjct: 294 AGRVDEAIERLEALRHTGTFVL--GLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADVSP 351
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
+ + I I G + R ++A EMK G P Y+T++++ C + L+
Sbjct: 352 DIVLYTIMIRGCAEAGRTNDAFAFFDEMKEKGFTPDTFCYNTLLKALCDAGDLDGARSLM 411
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
EM ++ TYTT++ L K +EA+++ + M VG P +N LI L RA
Sbjct: 412 SEMVRNNVVLDIHTYTTMIIGLCKEQLVDEAMQVFDGMVEVGCHPSVMTYNVLIDGLYRA 471
Query: 356 SRVQEA-VYVYQVEMPEN-----------GVAPDTSTFNTMITMFSHHGHHEKAFHVLEE 403
R++EA + Y++E+ N D+ T ++ G KA+ +L
Sbjct: 472 HRLEEARMLFYKMEVGNNPSLFLRLTLGANQVRDSETLQKLVESMCQSGQVLKAYKLLRG 531
Query: 404 MNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCR 463
+ P+V T++ LL K D L + V LD TY +I L R
Sbjct: 532 IID-SGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKG--FPLDEITYGTLIDSLLR 588
Query: 464 ANKCEWAYLLFKEMIGHDITP 484
A++ A LF++++ TP
Sbjct: 589 AHRYNDALTLFQDILHSGGTP 609
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 78/179 (43%), Gaps = 3/179 (1%)
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
+ G +P + F LI+ A R EAV + E G P T +N ++ + G
Sbjct: 131 QAAGLQPPTAAFEALIFAHASAGRHHEAVEAFSRMEGEFGCRPTTFVYNAVLRVLVASGG 190
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
L C PN T++ L+ K G + L +L D+M+++ ++ ++ T
Sbjct: 191 AVPLALALYNRMVAAGCLPNRATYNVLIHGLCKRGTPVDAL-KLFDEMISR-GITPNVKT 248
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEAV 511
+T+++ +C A + + A L M P T L + K + +A E++EA+
Sbjct: 249 HTILLSSMCNAGQLKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEAL 307
>gi|359483659|ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/428 (26%), Positives = 200/428 (46%), Gaps = 24/428 (5%)
Query: 98 PSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALL 157
P+H + LI K AL FRWA + P + H+ Y ++ L R+ + ++ +L
Sbjct: 92 PTHQHIAHLILEQKS-ASQALQTFRWASNLPNFIHNQSTYRALIHKLCSFRRFETVKEVL 150
Query: 158 EEM--SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK 215
+EM S G + ++R A ++ D + FG + + N +LD L K
Sbjct: 151 DEMPSSIGSPPDESIFVTIVRGLGRARMVRQMIKVLDLITKFGENPSLKIFNSILDVLVK 210
Query: 216 EGKVELARSVFLE--LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI 273
E ++LAR + + + + + + +TF I + G C NR+ +A +Q MK G P +
Sbjct: 211 E-DIDLAREFYRKKMMMNGVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTPNTV 269
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
Y+T+I + C+ + L++EM P+ VT+ ++S + + +A+ + EK
Sbjct: 270 IYNTMIHALCKNGKVGRARSLMNEM----VEPSDVTFNVLISAYCQEENLVQALVLLEKS 325
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
+G PD ++ L +A RV E V V + GV D +NT+I F G
Sbjct: 326 FSMGFVPDVVTATKVVGILCKAGRVTEGVEVLERVESMGGVV-DVVAYNTLIKGFCMLGK 384
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
+ VL++M +++ C PNV T++ L +G D + L +DM ++ + T
Sbjct: 385 AKVGHRVLKDM-EIKGCLPNVDTYNILASGYCDSGMLDSAI-DLFNDM-KTDGINWNFMT 441
Query: 454 YTLVIHGLCRANKCEWAYLLFKEM------IGHDITPRYQTCRLILDEVKQKHMYDAAEK 507
Y +I GLC + E + + + M G I+P Y + I+ + +K+ ++ A +
Sbjct: 442 YDTLIRGLCSGGRMEDGFKILELMEESRGGAGGRISP-YNS---IIYGLYKKNQFEEALE 497
Query: 508 IEAVMKKL 515
M+KL
Sbjct: 498 FLTKMEKL 505
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 108/425 (25%), Positives = 185/425 (43%), Gaps = 60/425 (14%)
Query: 106 LIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI 165
L +R D +K L + + G P ++ IY M+ L K ++ + R+L+ EM +
Sbjct: 245 LTNRIGDAFK-LLQVMKSRGKTP----NTVIYNTMIHALCKNGKVGRARSLMNEMVEPSD 299
Query: 166 VTLN--------------------------------TIAKVMRRFSGAGQWEDAVRTFDE 193
VT N T KV+ AG+ + V +
Sbjct: 300 VTFNVLISAYCQEENLVQALVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLER 359
Query: 194 LGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKIN 251
+ + G + N L+ C GK ++ V +E+K C+P N T+NI G+C
Sbjct: 360 VESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLP-NVDTYNILASGYCDSG 418
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYC---RQYNFSKVYELLDEMQAQGCPPNVV 308
+D A +MK G + ++Y T+I+ C R + K+ EL++E + G +
Sbjct: 419 MLDSAIDLFNDMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKILELMEESRG-GAGGRIS 477
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIY----TLGRASRVQEAVYV 364
Y +++ L K FEEA+ KM+ + + R L + ++G A RV +
Sbjct: 478 PYNSIIYGLYKKNQFEEALEFLTKMEKLFPRAVDRSLRILGFCNEGSIGDAKRVYD---- 533
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCK-PNVQTFHPLLKS 423
+M + G P + +I F G+ +AF ++ EM ++H P TF+ L+ +
Sbjct: 534 ---QMIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINEM--VDHGYFPTAPTFNALISA 588
Query: 424 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
GK L +L++DMV + L D+ +Y+ ++ LC + A LF +M+ DI
Sbjct: 589 FCGQGKVGSAL-KLMEDMVGRGCLP-DMGSYSPMVDALCNKGDFQKAVRLFLQMVEKDIL 646
Query: 484 PRYQT 488
P Y T
Sbjct: 647 PDYST 651
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 159/398 (39%), Gaps = 47/398 (11%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEE--MSKGHIVTLNTIAKVMRRFSGAGQWED 186
G S +I+ ++D+L K +D R + M G T +M+ + D
Sbjct: 193 GENPSLKIFNSILDVLVK-EDIDLAREFYRKKMMMNGVSGDDYTFGILMKGLCLTNRIGD 251
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHG 246
A + + + G NT N ++ LCK GKV ARS+ E+ + P+ TFN+ I
Sbjct: 252 AFKLLQVMKSRGKTPNTVIYNTMIHALCKNGKVGRARSLMNEM---VEPSDVTFNVLISA 308
Query: 247 W-----------------------------------CKINRVDEAQWTIQEMKGHGCHPC 271
+ CK RV E ++ ++ G
Sbjct: 309 YCQEENLVQALVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLERVESMGGVVD 368
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
V++Y+T+I+ +C + +L +M+ +GC PNV TY + S SG + AI +
Sbjct: 369 VVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFN 428
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV-EMPENGVAPDTSTFNTMITMFSH 390
MK G + ++ LI L R+++ + ++ E G S +N++I
Sbjct: 429 DMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKILELMEESRGGAGGRISPYNSIIYGLYK 488
Query: 391 HGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLD 450
E+A L +M KL V +L C + D ++ D M+ + +
Sbjct: 489 KNQFEEALEFLTKMEKL--FPRAVDRSLRILGFCNEGSIGDA--KRVYDQMIKEGGVP-S 543
Query: 451 ITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ Y +IHG C+ A+ L EM+ H P T
Sbjct: 544 VLVYVCLIHGFCQDGNVREAFELINEMVDHGYFPTAPT 581
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 113/268 (42%), Gaps = 37/268 (13%)
Query: 154 RALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTL 213
R L + KG + ++T + + +G + A+ F+++ T G+ N T + L+ L
Sbjct: 390 RVLKDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGL 449
Query: 214 CKEGKVELARSV------------------------------------FLELKSCIPPNA 237
C G++E + FL + P A
Sbjct: 450 CSGGRMEDGFKILELMEESRGGAGGRISPYNSIIYGLYKKNQFEEALEFLTKMEKLFPRA 509
Query: 238 HTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDE 297
++ I G+C + +A+ +M G P V+ Y +I +C+ N + +EL++E
Sbjct: 510 VDRSLRILGFCNEGSIGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINE 569
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
M G P T+ ++S G A+++ E M G PD ++ ++ L
Sbjct: 570 MVDHGYFPTAPTFNALISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDALCNKGD 629
Query: 358 VQEAVYVYQVEMPENGVAPDTSTFNTMI 385
Q+AV ++ ++M E + PD ST+N+M+
Sbjct: 630 FQKAVRLF-LQMVEKDILPDYSTWNSML 656
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 105/221 (47%), Gaps = 8/221 (3%)
Query: 145 GKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTE 204
G++ ++ L+EE G ++ ++ Q+E+A+ ++
Sbjct: 453 GRMEDGFKILELMEESRGGAGGRISPYNSIIYGLYKKNQFEEALEFLTKMEKLFPRAVDR 512
Query: 205 TMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
++ +L C EG + A+ V+ ++ K P+ + IHG+C+ V EA I EM
Sbjct: 513 SLRIL--GFCNEGSIGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINEM 570
Query: 264 KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF 323
HG P +++ +I ++C Q +L+++M +GC P++ +Y+ ++ L GDF
Sbjct: 571 VDHGYFPTAPTFNALISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDALCNKGDF 630
Query: 324 EEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
++A+R+ +M PD +N ++ L QE V++
Sbjct: 631 QKAVRLFLQMVEKDILPDYSTWNSMLLCL-----TQETVWL 666
>gi|356549285|ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Glycine max]
Length = 479
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 186/392 (47%), Gaps = 15/392 (3%)
Query: 97 QPSHYLVNKLIHRFKDDWKSALGIFRWAGS--CPGYEHSSEIYEMMVDILGKVRQMDQMR 154
Q ++ LV +LI KD K A+ +F A + G+ H E + +++ L V Q
Sbjct: 12 QITNSLVVQLIKAEKDVHK-AVNMFDSATAEYGNGFRHDHETFGLIISRLVTVNQFRPAE 70
Query: 155 ALLEEMSKGH-IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTL 213
+LE M + +VT + + R + + DA+R F ++ F L + +LD L
Sbjct: 71 GMLERMKQEKCMVTEDIFLSICRGYGRVHRPLDAIRVFHKMEGFQLRPTQKAYLTILDIL 130
Query: 214 CKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINR-VDEAQWTIQEMKGHGCHPC 271
+E V+ A + E++ IP + + NI I CK VD A QEM GC P
Sbjct: 131 VEENHVKRAIGFYREMRELGIPSSVVSLNILIKALCKNKETVDSALRIFQEMPNRGCQPD 190
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
+Y T+I CR N S+ EL EM+ +G +VVTYT+++ L +S + +EAI + E
Sbjct: 191 SYTYGTLINGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEAIGLLE 250
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHH 391
+MK +P+ ++ L+ L + +A+ + +V M + P+ T++T+I
Sbjct: 251 EMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEV-MDKKHHLPNMVTYSTLINGLCKE 309
Query: 392 GHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMV------NKH 445
+A +L+ M +++ KPN + ++ G E + +D+MV N+
Sbjct: 310 RKLREAVEILDRM-RIQGLKPNAGLYGKIISGLCAAGSYQEA-ANFIDEMVLGGISPNRA 367
Query: 446 HLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
SL + + +V+ GLC A+ L+ M
Sbjct: 368 SWSLHVRMHNMVVQGLCNNVDPPRAFQLYLSM 399
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 163/359 (45%), Gaps = 51/359 (14%)
Query: 133 SSEIYEMMVDILGKVRQMDQMRALLEEMSK----GHIVTLNTIAKVMRRFSGAGQWEDAV 188
+ + Y ++DIL + + + EM + +V+LN + K + + + A+
Sbjct: 119 TQKAYLTILDILVEENHVKRAIGFYREMRELGIPSSVVSLNILIKALCK--NKETVDSAL 176
Query: 189 RTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGW 247
R F E+ G + ++ T L++ LC+ G + A+ +F E+ + + T+ IHG
Sbjct: 177 RIFQEMPNRGCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLIHGL 236
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
C+ N +DEA ++EMK + P V +YS+++ C+ + S+ +LL+ M + PN+
Sbjct: 237 CQSNNLDEAIGLLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLPNM 296
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
VTY+T+++ L K EA+ I ++M+I G KP++ + +I L A QEA
Sbjct: 297 VTYSTLINGLCKERKLREAVEILDRMRIQGLKPNAGLYGKIISGLCAAGSYQEAANFID- 355
Query: 368 EMPENGVAPDTS------------------------------------------TFNTMI 385
EM G++P+ + TF+ ++
Sbjct: 356 EMVLGGISPNRASWSLHVRMHNMVVQGLCNNVDPPRAFQLYLSMRTRCISVEIDTFDCLV 415
Query: 386 TMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK 444
F G KA +LEEM L+ C P+ ++ ++ + K E QLL ++ K
Sbjct: 416 KCFCKRGDLHKAARILEEM-VLDGCIPDEGVWNVVIGGLWDRKKVREATEQLLVELQQK 473
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/373 (21%), Positives = 156/373 (41%), Gaps = 47/373 (12%)
Query: 50 RLDHHQVLCVDSPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHR 109
+++ Q+ L +D+++ + HV + ++ +++ + +++ + L+ K + +
Sbjct: 110 KMEGFQLRPTQKAYLTILDILVEENHVKRAIG-FYREMRELGIPSSVVSLNILI-KALCK 167
Query: 110 FKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTL 168
K+ SAL IF+ + G + S Y +++ L ++ + + + L +EM KG ++
Sbjct: 168 NKETVDSALRIFQEMPN-RGCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQKGFSASV 226
Query: 169 NTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE 228
T ++ + ++A+ +E+ +E N T + L+D LCK G A +
Sbjct: 227 VTYTSLIHGLCQSNNLDEAIGLLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEV 286
Query: 229 L-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYN 287
+ K PN T++ I+G CK ++ EA + M+ G P Y II C +
Sbjct: 287 MDKKHHLPNMVTYSTLINGLCKERKLREAVEILDRMRIQGLKPNAGLYGKIISGLCAAGS 346
Query: 288 FSKVYELLDEMQAQGCPPN----------------------------------------- 306
+ + +DEM G PN
Sbjct: 347 YQEAANFIDEMVLGGISPNRASWSLHVRMHNMVVQGLCNNVDPPRAFQLYLSMRTRCISV 406
Query: 307 -VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
+ T+ ++ K GD +A RI E+M + G PD +N +I L +V+EA
Sbjct: 407 EIDTFDCLVKCFCKRGDLHKAARILEEMVLDGCIPDEGVWNVVIGGLWDRKKVREATEQL 466
Query: 366 QVEMPENGVAPDT 378
VE+ + V ++
Sbjct: 467 LVELQQKFVEAES 479
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 114/281 (40%), Gaps = 38/281 (13%)
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
TF + I +N+ A+ ++ MK C + +I + Y R + + +M
Sbjct: 52 TFGLIISRLVTVNQFRPAEGMLERMKQEKCMVTEDIFLSICRGYGRVHRPLDAIRVFHKM 111
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR- 357
+ P Y T++ L + + AI +M+ +G N LI L +
Sbjct: 112 EGFQLRPTQKAYLTILDILVEENHVKRAIGFYREMRELGIPSSVVSLNILIKALCKNKET 171
Query: 358 VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNK----------- 406
V A+ ++Q EMP G PD+ T+ T+I G+ +A + +EM +
Sbjct: 172 VDSALRIFQ-EMPNRGCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQKGFSASVVTYT 230
Query: 407 ------------------LEHCK-----PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVN 443
LE K PNV T+ L+ K G + + + QLL+ M
Sbjct: 231 SLIHGLCQSNNLDEAIGLLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAM-QLLEVMDK 289
Query: 444 KHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
KHHL ++ TY+ +I+GLC+ K A + M + P
Sbjct: 290 KHHLP-NMVTYSTLINGLCKERKLREAVEILDRMRIQGLKP 329
>gi|242075962|ref|XP_002447917.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
gi|241939100|gb|EES12245.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
Length = 550
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 177/368 (48%), Gaps = 9/368 (2%)
Query: 116 SALGIFRWAGSCP-GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS--KGHIVTLNTIA 172
SAL IF S P S + Y ++ +L + + L ++M+ G++ +
Sbjct: 92 SALRIFSALHSPPLSVPPSEQSYSHVITLLCRSGRHRDALKLFDQMTDQSGYLPDAVFFS 151
Query: 173 KVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--K 230
V + AG + AV + FG N LL+ L G+ + A ++F
Sbjct: 152 FVAGSCTNAGLLDAAVTLLTKASQFGRRIEPYAYNNLLNLLIARGRAQDAVALFESWIQD 211
Query: 231 SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSK 290
P+ +FN+ I G C++ +A ++ M GC P I+++ ++ CR ++
Sbjct: 212 GLYSPDGWSFNVVIKGVCRVGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNR 271
Query: 291 VYELLDEMQAQG-CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
++LL +Q G C PNVVTYT+V+S K+G E+A+ + M G++P++ +N LI
Sbjct: 272 GHDLLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLI 331
Query: 350 YTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH 409
G+A ++ AV +Y+ ++ PD TF+++I + G + A + +EM + H
Sbjct: 332 NGYGKALDMESAVRMYR-QLILRRCPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQ-HH 389
Query: 410 CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEW 469
+PNV TF ++ S K ++ E L L ++ + ++ Y VI LC+ + E
Sbjct: 390 IQPNVYTFSIIIHSLCKQNRSAEALG-FLRELNMRADIAPQTFIYNPVIDILCKGGQVEE 448
Query: 470 AYLLFKEM 477
A L+ +M
Sbjct: 449 ANLIVTDM 456
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 151/317 (47%), Gaps = 11/317 (3%)
Query: 77 GSSEDEV--FQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSS 134
G ++D V F+S QD + + S +V K + R + K+ + R G +
Sbjct: 196 GRAQDAVALFESWIQDGLYSPDGWSFNVVIKGVCRVGNFQKALELVERMTEF--GCSPDT 253
Query: 135 EIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLN--TIAKVMRRFSGAGQWEDAVRTFD 192
+ ++VD L + +Q+++ LL + + + N T V+ + AG+ EDA+ ++
Sbjct: 254 ITHNILVDGLCRAKQVNRGHDLLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDALSVYN 313
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKI 250
++ G NT T N+L++ K +E A ++ L L+ C PP+ TF+ I G+C+
Sbjct: 314 DMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRRC-PPDVVTFSSLIDGYCRC 372
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG-CPPNVVT 309
++D+A +EM H P V ++S II S C+Q ++ L E+ + P
Sbjct: 373 GQLDDAMRIWKEMGQHHIQPNVYTFSIIIHSLCKQNRSAEALGFLRELNMRADIAPQTFI 432
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM 369
Y V+ L K G EEA I M+ G PD + LI R+ EA+ ++ +M
Sbjct: 433 YNPVIDILCKGGQVEEANLIVTDMEEKGCHPDKYTYTILIIGHCMKGRIPEAITLFH-KM 491
Query: 370 PENGVAPDTSTFNTMIT 386
E G PD T N+ I+
Sbjct: 492 VETGCRPDKITVNSFIS 508
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 137/266 (51%), Gaps = 7/266 (2%)
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-- 231
V++ G ++ A+ + + FG +T T N+L+D LC+ +V + L+
Sbjct: 224 VIKGVCRVGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRDG 283
Query: 232 -CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSK 290
C+P N T+ I G+CK R+++A +M G P ++Y+ +I Y + +
Sbjct: 284 VCMP-NVVTYTSVISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALDMES 342
Query: 291 VYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIY 350
+ ++ + CPP+VVT+++++ + G ++A+RI ++M +P+ F+ +I+
Sbjct: 343 AVRMYRQLILRRCPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFSIIIH 402
Query: 351 TLGRASRVQEAV-YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH 409
+L + +R EA+ ++ ++ M + +AP T +N +I + G E+A ++ +M + +
Sbjct: 403 SLCKQNRSAEALGFLRELNMRAD-IAPQTFIYNPVIDILCKGGQVEEANLIVTDMEE-KG 460
Query: 410 CKPNVQTFHPLLKSCFKTGKTDECLS 435
C P+ T+ L+ G+ E ++
Sbjct: 461 CHPDKYTYTILIIGHCMKGRIPEAIT 486
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 172/357 (48%), Gaps = 12/357 (3%)
Query: 82 EVFQSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEM 139
EV L + + P+ N LI+ + +AL IF W G +++ Y
Sbjct: 355 EVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEG-HGSLANTQTYNE 413
Query: 140 MVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
++ L +++ L E+M K G + T+ T ++ + G +A R D + G
Sbjct: 414 IIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENG 473
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQ 257
E + T N L+ K GK+E A F E+ C + PN ++ I G K +VD A
Sbjct: 474 CEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIAL 533
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
++ M+ GC+P V SY+ +I ++ FS+ ++ D+M QG PNV+TYTT++ L
Sbjct: 534 SLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGL 593
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
++G + A +I M+ P+ ++ LIY L + + EA + + EM G+APD
Sbjct: 594 CRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLK-EMERKGLAPD 652
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
TF ++I F G + AF +L M + CKPN +T+ LLK G ECL
Sbjct: 653 EVTFTSLIDGFVVLGRIDHAFLLLRRMVDM-GCKPNYRTYSVLLK-----GLQKECL 703
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 181/382 (47%), Gaps = 7/382 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
G + + Y ++ L ++ +++ L +M K G + T ++ G++ A
Sbjct: 333 GCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTA 392
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIP-PNAHTFNIFIHG 246
++ F + G NT+T N ++ LC G +E A +F ++ P P T+N I+G
Sbjct: 393 LKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLING 452
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
+ V+ A + MK +GC P +Y+ ++ + + EM G PN
Sbjct: 453 YLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPN 512
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
V+YT ++ +K G + A+ + ++M+ +G P+ +N +I L + +R EA +
Sbjct: 513 PVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICD 572
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
+M E G+ P+ T+ T+I +G + AF + +M K C PN+ T+ L+ +
Sbjct: 573 -KMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEK-RKCLPNLYTYSSLIYGLCQ 630
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
GK DE +++L + + L+ D T+T +I G + + A+LL + M+ P Y
Sbjct: 631 EGKADE--AEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNY 688
Query: 487 QTCRLILDEVKQKHMYDAAEKI 508
+T ++L + QK EKI
Sbjct: 689 RTYSVLLKGL-QKECLLLEEKI 709
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 186/388 (47%), Gaps = 6/388 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G + +S Y +++ L ++D+ +LEEM KG T+ T + E+A
Sbjct: 263 GCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEA 322
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHG 246
+ + G N +T L+ L + GK+E+A ++ + LK + PN T+N I+
Sbjct: 323 IELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINE 382
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C R A M+GHG +Y+ II+ C + K L ++M G P
Sbjct: 383 LCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPT 442
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
VVTY T+++ G+ A R+ + MK G +PD +N L+ + +++ A + +Q
Sbjct: 443 VVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQ 502
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
EM E G+ P+ ++ +I S G + A +L+ M ++ C PNV++++ ++ K
Sbjct: 503 -EMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEM-GCNPNVESYNAVINGLSK 560
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
+ E ++ D MV + L ++ TYT +I GLCR + ++A+ +F +M P
Sbjct: 561 ENRFSEA-EKICDKMVEQGLLP-NVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNL 618
Query: 487 QTCRLILDEVKQKHMYDAAEKIEAVMKK 514
T ++ + Q+ D AE + M++
Sbjct: 619 YTYSSLIYGLCQEGKADEAEILLKEMER 646
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 175/377 (46%), Gaps = 12/377 (3%)
Query: 144 LGKVRQMDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGL 199
L K ++ R L ++M I +T NT+ ++ S G+ +A ++ + L
Sbjct: 173 LAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINIL---SKKGKVREAELILSQIFQYDL 229
Query: 200 EKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQW 258
+ T L+ C+ ++LA VF + K PN+ T++ I+G C RVDEA
Sbjct: 230 SPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALD 289
Query: 259 TIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLA 318
++EM G P V +Y+ I + C + + EL+ M+ +GC PNV TYT ++S L+
Sbjct: 290 MLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLS 349
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDT 378
+ G E AI + KM G P++ +N LI L R A+ ++ M +G +T
Sbjct: 350 RLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFH-WMEGHGSLANT 408
Query: 379 STFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLL 438
T+N +I G EKA + E+M K+ P V T++ L+ G + L
Sbjct: 409 QTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPL-PTVVTYNTLINGYLTKGNVNNAARLL- 466
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQ 498
D++ ++ D TY ++ G + K E A F+EM+ + P + ++D +
Sbjct: 467 -DLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSK 525
Query: 499 KHMYDAAEKIEAVMKKL 515
D A + M+++
Sbjct: 526 DGKVDIALSLLKRMEEM 542
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 172/369 (46%), Gaps = 8/369 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
G E + Y + + L + ++ L+ M K G + T ++ S G+ E A
Sbjct: 298 GIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVA 357
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIH 245
+ + ++ GL NT T N L++ LC G+ A +F +E + N T+N I
Sbjct: 358 IGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLA-NTQTYNEIIK 416
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G C +++A ++M G P V++Y+T+I Y + N + LLD M+ GC P
Sbjct: 417 GLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEP 476
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
+ TY ++S +K G E A ++M G P+ + LI + +V A+ +
Sbjct: 477 DEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLL 536
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
+ M E G P+ ++N +I S +A + ++M + + PNV T+ L+
Sbjct: 537 K-RMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVE-QGLLPNVITYTTLIDGLC 594
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
+ G+T ++ DM + L ++ TY+ +I+GLC+ K + A +L KEM + P
Sbjct: 595 RNGRTQFAF-KIFHDMEKRKCLP-NLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPD 652
Query: 486 YQTCRLILD 494
T ++D
Sbjct: 653 EVTFTSLID 661
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 112/425 (26%), Positives = 180/425 (42%), Gaps = 74/425 (17%)
Query: 70 IISKVH-VGSSE-DEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSC 127
I+S+V GSSE ++ LK HV + +H+ D +S + F W
Sbjct: 54 ILSRVQWKGSSELKQLSPQLKAHHVAEIVA---------VHK---DTESVIQFFYWISKR 101
Query: 128 PGYEHSSEIYEMMVDILGKVRQM---DQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQW 184
P Y+H+ + M++ L + R D +R L+ + + + +A + SG G
Sbjct: 102 PFYKHNMNCFISMLNRLVRDRVFAPADHIRILMIKACRNE-EEIRRVADFLNEISGMG-- 158
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIF 243
FG + + N LL L K VE AR+++ + L S I P+ TFN
Sbjct: 159 ------------FGF--SLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTL 204
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
I+ K +V EA+ +I S QY+ S
Sbjct: 205 INILSKKGKVREAE--------------------LILSQIFQYDLS-------------- 230
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
P+V TYT+++ ++ + + A + ++M G P+S ++ LI L RV EA+
Sbjct: 231 -PDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALD 289
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
+ + EM E G+ P T+ IT H E+A ++ M K C+PNVQT+ L+
Sbjct: 290 MLE-EMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKK-RGCRPNVQTYTALISG 347
Query: 424 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
+ GK + + L M+ K L + TY +I+ LC + A +F M GH
Sbjct: 348 LSRLGKLEVAIG-LYHKML-KEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSL 405
Query: 484 PRYQT 488
QT
Sbjct: 406 ANTQT 410
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 113/250 (45%), Gaps = 6/250 (2%)
Query: 260 IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK 319
+ E+ G G + S +T++ + L +M G P+++T+ T+++ L+K
Sbjct: 151 LNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSK 210
Query: 320 SGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTS 379
G EA I ++ PD + LI R + A V+ M + G P++
Sbjct: 211 KGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFD-RMVKEGCDPNSV 269
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFH-PLLKSCFKTGKTDECLSQLL 438
T++T+I + G ++A +LEEM + + +P V T+ P+ C + + + L
Sbjct: 270 TYSTLINGLCNEGRVDEALDMLEEMIE-KGIEPTVYTYTLPITALCAIEHEEE---AIEL 325
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQ 498
+ K ++ TYT +I GL R K E A L+ +M+ + P T +++E+
Sbjct: 326 VARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCV 385
Query: 499 KHMYDAAEKI 508
+ A KI
Sbjct: 386 GGRFSTALKI 395
>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 485
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/425 (24%), Positives = 203/425 (47%), Gaps = 16/425 (3%)
Query: 90 DHVCNAIQ----PSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDI 143
D C IQ PS +K++ + ++ + +F C G H Y ++++
Sbjct: 55 DLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVC-GIGHDLYSYNIVINC 113
Query: 144 LGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKN 202
L + + +++ +M K G+ + T++ ++ F + DA+ ++ G +
Sbjct: 114 LCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPD 173
Query: 203 TETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQ 261
N ++D CK G V A +F + + + +A T+N + G C R +A ++
Sbjct: 174 VVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMR 233
Query: 262 EMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSG 321
+M P VI+++ +I + ++ FS+ +L +EM + P+V TY ++++ L G
Sbjct: 234 DMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHG 293
Query: 322 DFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTF 381
+EA ++ + M G PD +N LI ++ RV E +++ EM + G+ DT T+
Sbjct: 294 RVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFR-EMAQRGLVGDTITY 352
Query: 382 NTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDM 441
NT+I + G + A + M+ +PN++T+ LL + ++ L +L +
Sbjct: 353 NTIIQGYFQAGRPDAAQEIFSRMDS----RPNIRTYSILLYGLCMNWRVEKAL--VLFEN 406
Query: 442 VNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHM 501
+ K + LDITTY +VIHG+C+ E A+ LF+ + + P + ++ +K
Sbjct: 407 MQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQ 466
Query: 502 YDAAE 506
+D ++
Sbjct: 467 WDKSD 471
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 125/272 (45%), Gaps = 25/272 (9%)
Query: 46 SDGARLDHHQVLCVDSPRLPDIDVIISKVHVGSSEDEVFQSLK--QDHVCNAIQPSHYLV 103
SD ARL V+ +P++ + + V E + +++K ++ + P +
Sbjct: 226 SDAARLMRDMVM---RDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTY 282
Query: 104 NKLI-----HRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLE 158
N LI H D+ K L + G P Y +++ K +++D+ L
Sbjct: 283 NSLINGLCMHGRVDEAKQMLDLMVTKGCLP----DVVTYNTLINGFCKSKRVDEGTKLFR 338
Query: 159 EMSK----GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLC 214
EM++ G +T NTI ++ + AG+ + A F + + N T ++LL LC
Sbjct: 339 EMAQRGLVGDTITYNTI---IQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLC 392
Query: 215 KEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI 273
+VE A +F + KS I + T+NI IHG CKI V++A + + G P V+
Sbjct: 393 MNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVV 452
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
SY+T+I +CR+ + K L +MQ G P
Sbjct: 453 SYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 99/196 (50%), Gaps = 4/196 (2%)
Query: 145 GKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTE 204
G+V + QM L+ ++KG + + T ++ F + + ++ + F E+ GL +T
Sbjct: 293 GRVDEAKQMLDLM--VTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTI 350
Query: 205 TMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
T N ++ + G+ + A+ +F + S PN T++I ++G C RV++A + M+
Sbjct: 351 TYNTIIQGYFQAGRPDAAQEIFSRMDS--RPNIRTYSILLYGLCMNWRVEKALVLFENMQ 408
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
+ +Y+ +I C+ N ++L + +G P+VV+YTT++S + ++
Sbjct: 409 KSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWD 468
Query: 325 EAIRITEKMKIVGSKP 340
++ + KM+ G P
Sbjct: 469 KSDLLYRKMQEDGLLP 484
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 103/210 (49%), Gaps = 4/210 (1%)
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
P++V ++ V+S +AKS +++ I + M++ G D +N +I L R SR A+ V
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
+M + G PD T +++I F A ++ +M ++ +P+V ++ ++
Sbjct: 127 VG-KMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGF-RPDVVIYNTIIDGS 184
Query: 425 FKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
K G ++ + +L D M + + D TY ++ GLC + + A L ++M+ DI P
Sbjct: 185 CKIGLVNDAV-ELFDRM-ERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVP 242
Query: 485 RYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
T ++D ++ + A K+ M +
Sbjct: 243 NVITFTAVIDVFVKEGKFSEAMKLYEEMTR 272
>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
Length = 609
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 164/322 (50%), Gaps = 5/322 (1%)
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSC 232
+MR G+ A FDE+ + G+ + + N ++ +C+ G ++ A ++ + ++
Sbjct: 246 LMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAG 305
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
+ P+ +T+ I G C++ R+++A+ ++M G G P + ++ +I ++C++ + +
Sbjct: 306 VTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETML 365
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
EL EM+ +G P+ VTY +++ L ++ D + A I +M+ G +PD+ + LI
Sbjct: 366 ELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGY 425
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
+ + A+ + Q M GV D T+ +I+ S G A VL EM + +P
Sbjct: 426 CKEEELDMAMEIKQ-NMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMME-AGLEP 483
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
+ T+ ++ + + G L +LL +M NK + TY ++++G C+ + + A +
Sbjct: 484 DNTTYTMVIDAFCRKGDVKTGL-RLLKEMQNKGR-KPGVVTYNVIMNGFCKLGQMKNADM 541
Query: 473 LFKEMIGHDITPRYQTCRLILD 494
L MI ++P T ++LD
Sbjct: 542 LLNAMINIGVSPDDITYNILLD 563
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 164/343 (47%), Gaps = 12/343 (3%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKG---HIVTLNTIAKVMRRFSGAGQW 184
G ++++ +++ L ++ ++ + + +EM S+G +V+ NT+ M R AG
Sbjct: 235 GLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCR---AGDL 291
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIF 243
+ A + G+ + T L+ LC+ G++E AR VF ++ + PNA F I
Sbjct: 292 DGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTIL 351
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
I CK + +EM+ G P ++Y+ I+ CR + ++ EM++ G
Sbjct: 352 IDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGL 411
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
P+ VTYTT++ K + + A+ I + M G D + LI L +A R +A
Sbjct: 412 RPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAER 471
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
V EM E G+ PD +T+ +I F G + +L+EM + KP V T++ ++
Sbjct: 472 VLG-EMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQN-KGRKPGVVTYNVIMNG 529
Query: 424 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANK 466
K G+ LL+ M+N +S D TY +++ G C+ K
Sbjct: 530 FCKLGQMKNA-DMLLNAMINI-GVSPDDITYNILLDGHCKHGK 570
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 166/368 (45%), Gaps = 12/368 (3%)
Query: 95 AIQPSHYLVNKLIHRFK--DDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQ 152
+ P L N L+ + SA +F S G + + M+ + + +D
Sbjct: 235 GLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQS-RGVRRTVVSFNTMISGMCRAGDLDG 293
Query: 153 MRALLEEMSKGHIVT-LNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLD 211
L MS+ + + T +++ G+ EDA F+++ G++ N +L+D
Sbjct: 294 AETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILID 353
Query: 212 TLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHP 270
CK+G E + E++ + P+A T+N ++G C+ + A + EM+ G P
Sbjct: 354 AHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRP 413
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRIT 330
++Y+T+I YC++ E+ M A+G + VTYT ++S L+K+G +A R+
Sbjct: 414 DTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVL 473
Query: 331 EKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSH 390
+M G +PD+ + +I R V+ + + + EM G P T+N ++ F
Sbjct: 474 GEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLK-EMQNKGRKPGVVTYNVIMNGFCK 532
Query: 391 HGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLD 450
G + A +L M + P+ T++ LL K GK + ++++ + D
Sbjct: 533 LGQMKNADMLLNAMINI-GVSPDDITYNILLDGHCKHGKVTD-----IEELKSAKGTVPD 586
Query: 451 ITTYTLVI 458
+ YT ++
Sbjct: 587 LGVYTSIV 594
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 125/271 (46%), Gaps = 4/271 (1%)
Query: 229 LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
L + +PP A FN+ + ++ + AQ EM+ G V+S++T+I CR +
Sbjct: 232 LDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDL 291
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
L M G P+V TY ++ L + G E+A + EKM G KP++ F L
Sbjct: 292 DGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTIL 351
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
I + + + +++ EM E GV PD T+N ++ + A ++ EM
Sbjct: 352 IDAHCKKGDAETMLELHR-EMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRS-A 409
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
+P+ T+ L+ K + D + ++ +MV + LD TYT +I GL +A +
Sbjct: 410 GLRPDTVTYTTLIDGYCKEEELDMAM-EIKQNMV-AEGVGLDEVTYTALISGLSKAGRSA 467
Query: 469 WAYLLFKEMIGHDITPRYQTCRLILDEVKQK 499
A + EM+ + P T +++D +K
Sbjct: 468 DAERVLGEMMEAGLEPDNTTYTMVIDAFCRK 498
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 118/257 (45%), Gaps = 14/257 (5%)
Query: 70 IISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGI---FRWA 124
I+ H + E L ++ ++P N +++ D KSA GI R A
Sbjct: 350 ILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSA 409
Query: 125 GSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQ 183
G P + Y ++D K ++D + + M ++G + T ++ S AG+
Sbjct: 410 GLRP----DTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGR 465
Query: 184 WEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNI 242
DA R E+ GLE + T +++D C++G V+ + E+++ P T+N+
Sbjct: 466 SADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNV 525
Query: 243 FIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
++G+CK+ ++ A + M G P I+Y+ ++ +C+ + + EL A+G
Sbjct: 526 IMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEEL---KSAKG 582
Query: 303 CPPNVVTYTTVMSYLAK 319
P++ YT+++ + K
Sbjct: 583 TVPDLGVYTSIVGEIVK 599
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 96/220 (43%), Gaps = 8/220 (3%)
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
+LLD G PP + +M L + G+ A + ++M+ G + FN +I +
Sbjct: 230 QLLD----AGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGM 285
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
RA + A +++ M E GV PD T+ +I G E A V E+M KP
Sbjct: 286 CRAGDLDGAETLHR-RMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCG-RGMKP 343
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
N F L+ + K G + L L + + + D TY +++GLCRA + A
Sbjct: 344 NAVVFTILIDAHCKKGDAETMLE--LHREMRERGVRPDAVTYNAIVNGLCRARDLKSASG 401
Query: 473 LFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
+ EM + P T ++D ++ D A +I+ M
Sbjct: 402 IVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNM 441
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 63/131 (48%), Gaps = 3/131 (2%)
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
+ +++ + G+ P+ FN ++ G A +V +EM + V +F+ ++
Sbjct: 226 AFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQS-RGVRRTVVSFNTMISG 284
Query: 424 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
+ G D ++ L +++ ++ D+ TY +I GLCR + E A +F++M G +
Sbjct: 285 MCRAGDLDG--AETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMK 342
Query: 484 PRYQTCRLILD 494
P +++D
Sbjct: 343 PNAVVFTILID 353
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 183/361 (50%), Gaps = 12/361 (3%)
Query: 133 SSEIYEMMVDILGKVRQMDQMRALLEEMSKGH----IVTLNTIAKVMRRFSGAGQWEDAV 188
S + E++ + L + ++D L +M K IV N K++ + ++E +
Sbjct: 47 SGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFN---KLLSAVAKMNKFELVI 103
Query: 189 RTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGW 247
+++ T G+ + T ++ ++ C+ ++ LA +V ++ K P+ T + ++G+
Sbjct: 104 SLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGY 163
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
C R+ +A + +M G P +++T+I S+ L+D+M +GC P++
Sbjct: 164 CHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDL 223
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
VTY TV++ L K GD + A+ + +KM+ + D +N +I L + + +A+ ++
Sbjct: 224 VTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLF-T 282
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKT 427
EM G+ PD T++++I+ ++G A +L +M + PNV TF L+ + K
Sbjct: 283 EMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIE-RKINPNVVTFSALIDAFVKE 341
Query: 428 GKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
GK E +L D+M+ K + DI TY+ +I+G C ++ + A +F+ MI D P
Sbjct: 342 GKLVEA-EKLYDEMI-KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 399
Query: 488 T 488
T
Sbjct: 400 T 400
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 169/344 (49%), Gaps = 6/344 (1%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
IY ++D L K + MD L EM +KG + T + ++ G+W DA R ++
Sbjct: 260 IYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 319
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRV 253
+ N T + L+D KEGK+ A ++ E+ K I P+ T++ I+G+C +R+
Sbjct: 320 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 379
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
DEA+ + M C P V++YST+I+ +C+ + EL EM +G N VTYTT+
Sbjct: 380 DEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTL 439
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
+ ++ D + A + ++M VG P+ +N L+ L + ++ +A+ V++ + +
Sbjct: 440 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEY-LQRST 498
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
+ PD T+N MI G E + + ++ L+ PNV ++ ++ + G +E
Sbjct: 499 MEPDIYTYNIMIEGMCKAGKVEDGWELFCNLS-LKGVSPNVIAYNTMISGFCRKGSKEEA 557
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
S LL M L + TY +I R E + L KEM
Sbjct: 558 DS-LLKKMKEDGPLP-NSGTYNTLIRARLRDGDREASAELIKEM 599
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 181/369 (49%), Gaps = 8/369 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
G H Y + ++ + Q+ A+L +M K G+ + T++ ++ + + + DA
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIH 245
V D++ G + +T T L+ L K A ++ ++ + C P+ T+ ++
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGC-QPDLVTYGTVVN 231
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G CK +D A +++M+ V+ Y+TII C+ + L EM +G P
Sbjct: 232 GLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRP 291
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
+V TY++++S L G + +A R+ M P+ F+ LI + ++ EA +Y
Sbjct: 292 DVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 351
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
EM + + PD T++++I F H ++A H+ E M + C PNV T+ L+K
Sbjct: 352 D-EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS-KDCFPNVVTYSTLIKGFC 409
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
K + +E + +L +M ++ L + TYT +IHG +A C+ A ++FK+M+ + P
Sbjct: 410 KAKRVEEGM-ELFREM-SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPN 467
Query: 486 YQTCRLILD 494
T ++LD
Sbjct: 468 ILTYNILLD 476
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 167/365 (45%), Gaps = 40/365 (10%)
Query: 186 DAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFI 244
+AV D++ G + + T +++ LCK G ++LA S+ ++ K I + +N I
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTII 265
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
G CK +D+A EM G P V +YS++I C +S LL +M +
Sbjct: 266 DGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKIN 325
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKM------------------------------- 333
PNVVT++ ++ K G EA ++ ++M
Sbjct: 326 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 385
Query: 334 -KIVGSK---PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFS 389
+++ SK P+ ++ LI +A RV+E + +++ EM + G+ +T T+ T+I F
Sbjct: 386 FELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR-EMSQRGLVGNTVTYTTLIHGFF 444
Query: 390 HHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSL 449
+ A V ++M + PN+ T++ LL K GK + + ++ + + + +
Sbjct: 445 QARDCDNAQMVFKQMVSV-GVHPNILTYNILLDGLCKNGKLAKAM--VVFEYLQRSTMEP 501
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIE 509
DI TY ++I G+C+A K E + LF + ++P ++ +K + A+ +
Sbjct: 502 DIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLL 561
Query: 510 AVMKK 514
MK+
Sbjct: 562 KKMKE 566
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 108/208 (51%), Gaps = 2/208 (0%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ K +++++ L EMS +G + T ++ F A ++A F ++
Sbjct: 401 YSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 460
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
+ G+ N T N+LLD LCK GK+ A VF L +S + P+ +T+NI I G CK +V+
Sbjct: 461 SVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVE 520
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
+ + G P VI+Y+T+I +CR+ + + LL +M+ G PN TY T++
Sbjct: 521 DGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLI 580
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDS 342
+ GD E + + ++M+ G D+
Sbjct: 581 RARLRDGDREASAELIKEMRSCGFAGDA 608
>gi|15220863|ref|NP_178203.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200729|sp|Q9SAH2.1|PP137_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g80880, mitochondrial; Flags: Precursor
gi|6503300|gb|AAF14676.1|AC011713_24 Contains PF|01535 Domain of unknown function [Arabidopsis thaliana]
gi|91806121|gb|ABE65789.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332198342|gb|AEE36463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 540
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/409 (27%), Positives = 186/409 (45%), Gaps = 15/409 (3%)
Query: 70 IISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPG 129
+I +V SE + SL+ ++ +H LI +D+W+ A F+W G G
Sbjct: 97 LIRQVSELESEADAMASLED----SSFDLNHDSFYSLIWELRDEWRLAFLAFKW-GEKRG 151
Query: 130 YEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVR 189
+ ++M+ +LG ++ + L+ +M T + +M R++ A A+R
Sbjct: 152 CDDQKSC-DLMIWVLGNHQKFNIAWCLIRDMFNVSKDTRKAMFLMMDRYAAANDTSQAIR 210
Query: 190 TFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCK 249
TFD + F E LL LC+ G +E A L K P + FN+ ++GWC
Sbjct: 211 TFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFMLASKKLFPVDVEGFNVILNGWCN 270
Query: 250 I-NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
I V EA+ +EM + P SYS +I + + N L DEM+ +G P +
Sbjct: 271 IWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIE 330
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
Y +++ L + F+EA+++ +K+ G KPDS +N +I L A ++ A V
Sbjct: 331 VYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATM 390
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
+ EN ++P TF+ F + EK VL +M K+ P +TF +L FK G
Sbjct: 391 ISEN-LSPTVDTFHA----FLEAVNFEKTLEVLGQM-KISDLGPTEETFLLILGKLFK-G 443
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
K E ++ +M ++ + + Y I GL E A ++ EM
Sbjct: 444 KQPENALKIWAEM-DRFEIVANPALYLATIQGLLSCGWLEKAREIYSEM 491
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 4/139 (2%)
Query: 358 VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTF 417
V EA +++ EM + P+ +++ MI+ FS G+ + + +EM K P ++ +
Sbjct: 275 VTEAKRIWR-EMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKK-RGLAPGIEVY 332
Query: 418 HPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
+ L+ + DE + L +N+ L D TY +I LC A K + A + M
Sbjct: 333 NSLVYVLTREDCFDEAMK--LMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATM 390
Query: 478 IGHDITPRYQTCRLILDEV 496
I +++P T L+ V
Sbjct: 391 ISENLSPTVDTFHAFLEAV 409
>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
Length = 426
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 186/380 (48%), Gaps = 9/380 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
G H Y ++++ L + + +++ +M K G+ + T++ ++ F + DA
Sbjct: 40 GIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDA 99
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHG 246
+ ++ G + N ++D CK G V A +F + + + +A T+N + G
Sbjct: 100 IDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAG 159
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C R +A +++M P VI+++ +I + ++ FS+ +L +EM + P+
Sbjct: 160 LCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPD 219
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
V TY ++++ L G +EA ++ + M G PD +N LI ++ RV E +++
Sbjct: 220 VFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFR 279
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
EM + G+ DT T+NT+I + G + A + M+ +PN++T+ LL
Sbjct: 280 -EMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS----RPNIRTYSILLYGLCM 334
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
+ ++ L +L + + K + LDITTY +VIHG+C+ E A+ LF+ + + P
Sbjct: 335 NWRVEKAL--VLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDV 392
Query: 487 QTCRLILDEVKQKHMYDAAE 506
+ ++ +K +D ++
Sbjct: 393 VSYTTMISGFCRKRQWDKSD 412
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 125/272 (45%), Gaps = 25/272 (9%)
Query: 46 SDGARLDHHQVLCVDSPRLPDIDVIISKVHVGSSEDEVFQSLK--QDHVCNAIQPSHYLV 103
SD ARL V+ +P++ + + V E + +++K ++ + P +
Sbjct: 167 SDAARLMRDMVM---RDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTY 223
Query: 104 NKLI-----HRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLE 158
N LI H D+ K L + G P Y +++ K +++D+ L
Sbjct: 224 NSLINGLCMHGRVDEAKQMLDLMVTKGCLP----DVVTYNTLINGFCKSKRVDEGTKLFR 279
Query: 159 EMSK----GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLC 214
EM++ G +T NTI ++ + AG+ + A F + + N T ++LL LC
Sbjct: 280 EMAQRGLVGDTITYNTI---IQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLC 333
Query: 215 KEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI 273
+VE A +F + KS I + T+NI IHG CKI V++A + + G P V+
Sbjct: 334 MNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVV 393
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
SY+T+I +CR+ + K L +MQ G P
Sbjct: 394 SYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 425
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 99/196 (50%), Gaps = 4/196 (2%)
Query: 145 GKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTE 204
G+V + QM L+ ++KG + + T ++ F + + ++ + F E+ GL +T
Sbjct: 234 GRVDEAKQMLDLM--VTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTI 291
Query: 205 TMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
T N ++ + G+ + A+ +F + S PN T++I ++G C RV++A + M+
Sbjct: 292 TYNTIIQGYFQAGRPDAAQEIFSRMDS--RPNIRTYSILLYGLCMNWRVEKALVLFENMQ 349
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
+ +Y+ +I C+ N ++L + +G P+VV+YTT++S + ++
Sbjct: 350 KSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWD 409
Query: 325 EAIRITEKMKIVGSKP 340
++ + KM+ G P
Sbjct: 410 KSDLLYRKMQEDGLLP 425
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 103/210 (49%), Gaps = 4/210 (1%)
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
P++V ++ V+S +AKS +++ I + M++ G D +N +I L R SR A+ V
Sbjct: 8 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 67
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
+M + G PD T +++I F A ++ +M ++ +P+V ++ ++
Sbjct: 68 VG-KMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGF-RPDVVIYNTIIDGS 125
Query: 425 FKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
K G ++ + +L D M + + D TY ++ GLC + + A L ++M+ DI P
Sbjct: 126 CKIGLVNDAV-ELFDRM-ERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVP 183
Query: 485 RYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
T ++D ++ + A K+ M +
Sbjct: 184 NVITFTAVIDVFVKEGKFSEAMKLYEEMTR 213
>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
Length = 624
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 192/397 (48%), Gaps = 12/397 (3%)
Query: 117 ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVM 175
A+G+ R S G Y ++ L ++D+ L+ EM + I + + ++
Sbjct: 134 AVGLLRSMRSA-GVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLL 192
Query: 176 RRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIP 234
+ + +G+WED + F E+ G+E + L+D+LCK GK + A V + ++ +
Sbjct: 193 QGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLE 252
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYEL 294
PN T+N+ I+ CK V EA +++M G P V++Y+T+I+ + L
Sbjct: 253 PNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWL 312
Query: 295 LDEMQAQG---CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYT 351
L+EM +G PNVVT+ +V+ L G +A ++ M+ G + +N LI
Sbjct: 313 LEEM-VRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGG 371
Query: 352 LGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCK 411
L R +V++A+ + EM G+ PD+ T++ +I F ++A +L M +
Sbjct: 372 LLRVHKVRKAMELMD-EMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRD-RGIE 429
Query: 412 PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAY 471
P + + PLL + + G + L ++M N + LD+ Y+ +IHG C+A + A
Sbjct: 430 PELFHYIPLLVAMCEQGMMERA-RNLFNEMDN--NFPLDVVAYSTMIHGACKAGDLKTAK 486
Query: 472 LLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
L K ++ +TP T ++++ + +AA +
Sbjct: 487 ELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGV 523
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 151/314 (48%), Gaps = 7/314 (2%)
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSC 232
+MR + AV + + G+ + T L+ LC +V+ A + E+ +S
Sbjct: 121 LMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESG 180
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
I PN ++ + G+CK R ++ EM G P V+ Y+ +I S C+ K +
Sbjct: 181 IEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAH 240
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
++D M +G PNVVTY +++ + K G +EAI + +KM G PD +N LI L
Sbjct: 241 GVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGL 300
Query: 353 GRASRVQEAVYVYQVEM--PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHC 410
+ EA+++ + EM +N V P+ TFN++I G +AF V M + C
Sbjct: 301 SDVLEMDEAMWLLE-EMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEE-TGC 358
Query: 411 KPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWA 470
N+ T++ L+ + K + + +L+D+M + L D TY+++I G C+ + + A
Sbjct: 359 MVNLVTYNLLIGGLLRVHKVRKAM-ELMDEMTS-LGLEPDSFTYSILIKGFCKMWQVDRA 416
Query: 471 YLLFKEMIGHDITP 484
L M I P
Sbjct: 417 EDLLSTMRDRGIEP 430
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 161/353 (45%), Gaps = 43/353 (12%)
Query: 201 KNTETMNLLLDTLCKEG----KVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEA 256
++ + N +L LC+ G L R++ LE PNA ++ + + C D+A
Sbjct: 75 RDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQA 134
Query: 257 QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSY 316
++ M+ G V++Y T+I+ C K EL+ EM G PNVV Y++++
Sbjct: 135 VGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQG 194
Query: 317 LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL---GRASR---------------- 357
KSG +E+ ++ +M G +PD + LI +L G+A +
Sbjct: 195 YCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPN 254
Query: 358 ----------------VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVL 401
V+EA+ V + +M E GVAPD T+NT+I S ++A +L
Sbjct: 255 VVTYNVLINCMCKEGSVKEAIGVLK-KMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLL 313
Query: 402 EEMNKLEH-CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHG 460
EEM + ++ KPNV TF+ +++ G+ + + M+ + +++ TY L+I G
Sbjct: 314 EEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQ--VRAMMEETGCMVNLVTYNLLIGG 371
Query: 461 LCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
L R +K A L EM + P T +++ + D AE + + M+
Sbjct: 372 LLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMR 424
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/416 (21%), Positives = 183/416 (43%), Gaps = 51/416 (12%)
Query: 94 NAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMD 151
+ I+P+ + + L+ + W+ +F S G E +Y ++D L KV +
Sbjct: 179 SGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEM-SEKGIEPDVVMYTGLIDSLCKVGKAK 237
Query: 152 QMRALLEEMSK----GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN 207
+ +++ M + ++VT N + M + G ++A+ ++ G+ + T N
Sbjct: 238 KAHGVMDMMVRRGLEPNVVTYNVLINCMCK---EGSVKEAIGVLKKMSEKGVAPDVVTYN 294
Query: 208 LLLDTLCKEGKVELARSVFLEL---KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
L+ L +++ A + E+ K+ + PN TFN I G C I R+ +A M+
Sbjct: 295 TLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMME 354
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
GC +++Y+ +I R + K EL+DEM + G P+ TY+ ++ K +
Sbjct: 355 ETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVD 414
Query: 325 EAIRITEKMKIVGSKP----------------------------DSRF------FNCLIY 350
A + M+ G +P D+ F ++ +I+
Sbjct: 415 RAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIH 474
Query: 351 TLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHC 410
+A ++ A + + + + G+ PD T++ +I MF+ G E A VL++M
Sbjct: 475 GACKAGDLKTAKELLK-SIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTA-SGF 532
Query: 411 KPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANK 466
P+V F L++ G+ ++ L +L+ +M+ K +++LD + + L +N+
Sbjct: 533 LPDVAVFDSLIQGYSTKGEINKVL-ELIREMITK-NIALDSKIISTLSTSLVASNE 586
>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
Length = 514
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/405 (26%), Positives = 185/405 (45%), Gaps = 50/405 (12%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
IY +VD L K + + + EM KG + T ++ + G+W DA + ++
Sbjct: 82 IYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDM 141
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRV 253
++ + T + L++ KEGKV A ++ E L+ I P T++ I G+CK +R+
Sbjct: 142 IERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRL 201
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQY-----------NFSKVYELLDEMQAQG 302
++A+ M GC P +I+ +T+I CR N + +L EM + G
Sbjct: 202 EDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNG 261
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
P++VT T+++ L ++G E+A+ + + + D+ N +I + + ++V EA
Sbjct: 262 VSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAW 321
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM------------------ 404
++ +P NGV D T+N +I +F G+ +A + EM
Sbjct: 322 DLFN-SLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDG 380
Query: 405 ----NKLEH------------CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
N+LE C P+V TF L+K K G+ D+ L +L +M + L
Sbjct: 381 FCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGL-ELFSEMCQRG-LV 438
Query: 449 LDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
D TY +IHG C+ A +F+EM+ + P T R +L
Sbjct: 439 ADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSML 483
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 151/316 (47%), Gaps = 15/316 (4%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKG---HIVTLNTIAK--------VMRRFSGAGQW 184
Y M+D K +++ + + + M SKG I+TLNT+ ++ F G
Sbjct: 188 YSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNV 247
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIF 243
A F E+ + G+ + T N LL LC+ GK+E A +F KS + + T NI
Sbjct: 248 NVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNII 307
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
I+G CK N+VDEA + +G V++Y+ +I + ++ NF + ++ EM +G
Sbjct: 308 INGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGI 367
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
P+ VTY +++ K EEA ++ + M G PD F+ LI +A RV + +
Sbjct: 368 IPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLE 427
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
++ EM + G+ DT T+N +I F G A + EEM C P+ TF +L
Sbjct: 428 LFS-EMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVC-PDTITFRSMLAG 485
Query: 424 CFKTGKTDECLSQLLD 439
+ + L+ L D
Sbjct: 486 LCTKAELQKGLTMLED 501
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 139/318 (43%), Gaps = 29/318 (9%)
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEA 256
G N T L++ LC+EG+V A ++ + + P+A T+ ++G CK+ A
Sbjct: 5 GCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSA 64
Query: 257 QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSY 316
+++M V+ YS I+ C+ N K + EM +G PNV+TY ++
Sbjct: 65 LNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDG 124
Query: 317 LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
G + +A ++ M PD F+ LI + +V A +Y+ EM + P
Sbjct: 125 YCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYR-EMLRRNIFP 183
Query: 377 DTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQ 436
T T+++MI F H E A H+ + M + C P++ T + L+ C +
Sbjct: 184 TTITYSSMIDGFCKHSRLEDAKHMFDLMVS-KGCSPDIITLNTLIDGCCRA--------- 233
Query: 437 LLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV 496
K HL IHG C+ A LF+EMI + ++P TC +L +
Sbjct: 234 -------KRHL----------IHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGL 276
Query: 497 KQKHMYDAAEKIEAVMKK 514
+ + A ++ V +K
Sbjct: 277 CENGKLEKALEMFKVFQK 294
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 172/383 (44%), Gaps = 30/383 (7%)
Query: 152 QMRALLEEM-SKGH---IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN 207
Q AL++ M +GH VT TI M + + +R DE ++ N +
Sbjct: 28 QALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNMLRKMDE---SQIKANVVIYS 84
Query: 208 LLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
++D LCK+G A+++F E+ + I PN T+N I G+C + +A+ +++M
Sbjct: 85 AIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIER 144
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
P V+++S +I ++ ++ S EL EM + P +TY++++ K E+A
Sbjct: 145 NIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDA 204
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASR-----------VQEAVYVYQVEMPENGVA 375
+ + M G PD N LI RA R V A ++Q EM NGV+
Sbjct: 205 KHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQ-EMISNGVS 263
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS 435
PD T NT++ +G EKA + + K + T + ++ K K DE
Sbjct: 264 PDIVTCNTLLAGLCENGKLEKALEMFKVFQK-SKMDLDTATCNIIINGMCKGNKVDEAW- 321
Query: 436 QLLDDMVNK---HHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLI 492
D+ N + + D+ TY ++I + A ++ EM+ I P T +
Sbjct: 322 ----DLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSM 377
Query: 493 LDEV-KQKHMYDAAEKIEAVMKK 514
+D KQ + +A + +++++ +
Sbjct: 378 VDGFCKQNRLEEARQMVDSMVSE 400
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 109/213 (51%), Gaps = 11/213 (5%)
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
M GCP NVVT+TT+M+ L + G +A+ + ++M G +PD+ + ++ + +
Sbjct: 1 MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60
Query: 358 VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTF 417
A+ + + +M E+ + + ++ ++ G+H KA ++ EM++ + PNV T+
Sbjct: 61 TVSALNMLR-KMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHE-KGIFPNVLTY 118
Query: 418 HPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
+ ++ GK + QLL DM+ + ++ D+ T++ +I+ + K A L++EM
Sbjct: 119 NCMIDGYCSYGKWSDA-EQLLRDMIER-NIDPDVVTFSALINAFVKEGKVSGAEELYREM 176
Query: 478 IGHDITPRYQTCRLILDEV-------KQKHMYD 503
+ +I P T ++D KHM+D
Sbjct: 177 LRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFD 209
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 121/259 (46%), Gaps = 11/259 (4%)
Query: 83 VFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWK--SALGIFRWAGSCPGYEHSSEIYEMM 140
V Q L Q+ + N + P N L+ ++ K AL +F+ + + ++
Sbjct: 249 VAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSK-MDLDTATCNII 307
Query: 141 VDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGT 196
++ + K ++D+ L + + +VT N + V F G + A + E+
Sbjct: 308 INGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGV---FVKEGNFLRAEDIYLEMLC 364
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDE 255
G+ +T T N ++D CK+ ++E AR + + S P+ TF+ I G+CK RVD+
Sbjct: 365 KGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDD 424
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
EM G I+Y+ +I +C+ + + ++ +EM + G P+ +T+ ++++
Sbjct: 425 GLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLA 484
Query: 316 YLAKSGDFEEAIRITEKMK 334
L + ++ + + E ++
Sbjct: 485 GLCTKAELQKGLTMLEDLQ 503
>gi|242061252|ref|XP_002451915.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
gi|241931746|gb|EES04891.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
Length = 571
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/485 (22%), Positives = 210/485 (43%), Gaps = 90/485 (18%)
Query: 96 IQPSHYLVNKLIHRFKDDWKSALGI------FRWAGSCPGYEHSSEIYEMMVDILGKVRQ 149
++ H+LV +++ K+ +G+ FRWA YEH + Y ++ L V Q
Sbjct: 86 LRVDHWLVREIM-------KTDIGVNVKMQFFRWAAKRRNYEHDTSTYMALIHCLEVVEQ 138
Query: 150 MDQMRALLEEMSKGHI--VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN 207
+M +++EM + I VT +++V+R A A+ F ++ T + + N
Sbjct: 139 YGEMWKMIQEMVRNPICVVTPTELSEVVRMLGNAKMVSKAIAIFYQIKTRKCQPTAQAYN 198
Query: 208 LLLDTLCKEGKVELARSVFLELKS---CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
++ L EG+ E ++ E+ + C P+ T++ I +CK+ R D A + EMK
Sbjct: 199 SMIIMLMHEGQYEKVHELYNEMSTEGHCF-PDTMTYSALISAFCKLGRRDSAIQLLNEMK 257
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
+G P Y+ ++ + + + L +EM+ Q C P+V TYT ++ L K+G +
Sbjct: 258 DNGMQPTTKIYTMLVALFFKLNDVHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRID 317
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ------------------ 366
EA +M+ G +PD+ N +I LG+A R+ +A+ ++Q
Sbjct: 318 EAYHFFYEMQREGCRPDTIVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTII 377
Query: 367 -----------------VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNK--- 406
M E+G++P + T++ +I F EKA +LEEM++
Sbjct: 378 KALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGF 437
Query: 407 ------------------------------LEHC-KPNVQTFHPLLKSCFKTGKTDECLS 435
E+C + + + ++K K G+ D+ ++
Sbjct: 438 PPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSSRVYAVMIKHLGKAGRLDDAIN 497
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE 495
+ D+M NK + D+ Y ++ GL R + A + M H P + +IL+
Sbjct: 498 -MFDEM-NKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNG 555
Query: 496 VKQKH 500
++++
Sbjct: 556 LQKQE 560
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 91/224 (40%), Gaps = 42/224 (18%)
Query: 140 MVDILGKVRQMDQMRALLEEMSK----GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
M++ LGK ++D L +EM +VT NTI K + F + + F+ +
Sbjct: 341 MINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKAL--FESKSRASEVPSWFERMK 398
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVE----------------------------------- 220
G+ ++ T ++L+D CK ++E
Sbjct: 399 ESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYD 458
Query: 221 LARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
LA +F ELK +C ++ + + I K R+D+A EM GC P V +Y+ ++
Sbjct: 459 LACELFQELKENCGSSSSRVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALM 518
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF 323
R + + MQ GC P++ +Y +++ L K D
Sbjct: 519 SGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLQKQEDL 562
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 182/390 (46%), Gaps = 51/390 (13%)
Query: 137 YEMMVDIL---GKVRQMDQMRALLEEMS-KGHIVTLNTI--AKVMRRFSGAGQWEDAVRT 190
+ +M+++L GK+++ + +E + K ++VT NTI +R G+++ A
Sbjct: 219 FNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLR-----GKFQRARVI 273
Query: 191 FDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCK 249
F + GLE + T N + LCKEG++E A + + L+ + PNA T+N I G+C
Sbjct: 274 FQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCN 333
Query: 250 IN-----------------------------------RVDEAQWTIQEMKGHGCHPCVIS 274
R+ +A I+EM+ G P ++
Sbjct: 334 KGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVT 393
Query: 275 YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
++ +I YCR + + + LLDEM +G P +VTYT+++ L K +EA + K++
Sbjct: 394 HNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQ 453
Query: 335 IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHH 394
G PD FN LI + A + + EM V PD T+NT++ + G
Sbjct: 454 QEGLLPDIIVFNALIDGHCANGNIDRAFQLLK-EMDNMKVLPDEITYNTLMQGYCREGKV 512
Query: 395 EKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTY 454
E+A +L+EM K KP+ +++ L+ K G + ++ D+M+ I TY
Sbjct: 513 EEARQLLDEM-KRRGIKPDHISYNTLISGYSKRGDMKDAF-RVRDEMMTT-GFDPTILTY 569
Query: 455 TLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
+I GLC+ + E A L KEM+ ITP
Sbjct: 570 NALIQGLCKNQEGEHAEELLKEMVSKGITP 599
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 160/355 (45%), Gaps = 21/355 (5%)
Query: 162 KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVEL 221
KG + + T +++ F + + A + E+ + + T N++++ LCKEGK++
Sbjct: 175 KGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKK 234
Query: 222 ARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQ 280
A+ +++ + PN T+N IHG C + A+ Q MK G P +Y++ I
Sbjct: 235 AKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFIS 294
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
C++ + L+ +M G PN VTY ++ GD ++A ++M G
Sbjct: 295 GLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMA 354
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
+N I+ L R+ +A + + EM E G+ PD T N +I + G ++AF +
Sbjct: 355 SLVTYNLFIHALFMEGRMGDADNMIK-EMREKGMMPDAVTHNILINGYCRCGDAKRAFGL 413
Query: 401 LEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHG 460
L+EM + +P + T+ L+ K + E + L + + L DI + +I G
Sbjct: 414 LDEMVG-KGIQPTLVTYTSLIYVLGKRNRMKE--ADALFSKIQQEGLLPDIIVFNALIDG 470
Query: 461 LCRANKCEWAYLLFKEMIGHDITP----------------RYQTCRLILDEVKQK 499
C + A+ L KEM + P + + R +LDE+K++
Sbjct: 471 HCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRR 525
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 139/295 (47%), Gaps = 6/295 (2%)
Query: 95 AIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQ 152
+ P+ N LI + K D A +R G S Y + + L +M
Sbjct: 316 GLVPNAVTYNALIDGYCNKGDLDKAYA-YRDEMISKGIMASLVTYNLFIHALFMEGRMGD 374
Query: 153 MRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLD 211
+++EM KG + T ++ + G + A DE+ G++ T L+
Sbjct: 375 ADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIY 434
Query: 212 TLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHP 270
L K +++ A ++F +++ + P+ FN I G C +D A ++EM P
Sbjct: 435 VLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLP 494
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRIT 330
I+Y+T++Q YCR+ + +LLDEM+ +G P+ ++Y T++S +K GD ++A R+
Sbjct: 495 DEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVR 554
Query: 331 EKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMI 385
++M G P +N LI L + + A + + EM G+ PD ST+ ++I
Sbjct: 555 DEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLK-EMVSKGITPDDSTYLSII 608
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 124/284 (43%), Gaps = 39/284 (13%)
Query: 240 FNIFIHGWCKINRVDEA----------------------------------QWTI-QEMK 264
F++ + +C++ + +EA W + EM
Sbjct: 149 FDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMF 208
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
+ +++ +I C++ K E + M+ G PNVVTY T++ G F+
Sbjct: 209 RMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQ 268
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTM 384
A I + MK G +PD +N I L + R++EA + +M E G+ P+ T+N +
Sbjct: 269 RARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLI-CKMLEGGLVPNAVTYNAL 327
Query: 385 ITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK 444
I + + G +KA+ +EM + ++ T++ + + F G+ + ++ +M K
Sbjct: 328 IDGYCNKGDLDKAYAYRDEMIS-KGIMASLVTYNLFIHALFMEGRMGDA-DNMIKEMREK 385
Query: 445 HHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ D T+ ++I+G CR + A+ L EM+G I P T
Sbjct: 386 GMMP-DAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVT 428
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 99/215 (46%), Gaps = 5/215 (2%)
Query: 113 DWKSALGIF-RWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNT 170
D K A G+ G G + + Y ++ +LGK +M + AL ++ + G + +
Sbjct: 406 DAKRAFGLLDEMVGK--GIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIV 463
Query: 171 IAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK 230
++ G + A + E+ + + T N L+ C+EGKVE AR + E+K
Sbjct: 464 FNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMK 523
Query: 231 S-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFS 289
I P+ ++N I G+ K + +A EM G P +++Y+ +IQ C+
Sbjct: 524 RRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGE 583
Query: 290 KVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
ELL EM ++G P+ TY +++ + D E
Sbjct: 584 HAEELLKEMVSKGITPDDSTYLSIIEAMETVDDLE 618
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 75/181 (41%), Gaps = 4/181 (2%)
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTM 384
EA+ +K G P+ N ++ + +R Q A +Y EM + TFN M
Sbjct: 164 EALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLY-AEMFRMNIRSSLYTFNIM 222
Query: 385 ITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK 444
I + G +KA + M L KPNV T++ ++ GK ++++ +
Sbjct: 223 INVLCKEGKLKKAKEFIGHMETL-GVKPNVVTYNTIIHGHCLRGKFQR--ARVIFQTMKD 279
Query: 445 HHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDA 504
L D TY I GLC+ + E A L +M+ + P T ++D K D
Sbjct: 280 KGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDK 339
Query: 505 A 505
A
Sbjct: 340 A 340
>gi|449467169|ref|XP_004151297.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Cucumis sativus]
gi|449518833|ref|XP_004166440.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Cucumis sativus]
Length = 609
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/436 (25%), Positives = 210/436 (48%), Gaps = 24/436 (5%)
Query: 90 DHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQ 149
++ C ++ L+N L+ R K + A IF + G+ ++ Y +V L + ++
Sbjct: 51 NNSCGTVRSRTKLMNILVERGKP--QEAQFIFN-SLVEQGHRPTTVTYTALVAALTRQKR 107
Query: 150 MDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTET 205
+ LL EM + I + LN I + FS +G ++A+ F ++ G + T T
Sbjct: 108 FKAISGLLSEMEETGIKPDSILLNAI---INAFSESGNVKEAMEIFQKMEESGCKPTTST 164
Query: 206 MNLLLDTLCKEGKVELARSVFLEL---KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQE 262
N L+ K E + LEL + + PN T+NI + CK + EA + +
Sbjct: 165 FNTLIKGYGIIRKPEESMK-LLELMTRTTNLKPNNRTYNILVGALCKKKSIKEAWNVVHQ 223
Query: 263 MKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGD 322
M G P V++Y+T+ ++Y + +K ++ +M + PN T ++ + G+
Sbjct: 224 MLASGVQPDVVTYNTLARAYAQDGETNKAESIIVDMLNKKVNPNERTCGIIVGGYCEQGN 283
Query: 323 FEEAIRITEKMKIVGSKPDSRFFNCLI---YTLGRASRVQEAVYVYQVEMPENGVAPDTS 379
EA+R+ +M+ +G P+ FN LI +G + V +A+ + M E+GV PD
Sbjct: 284 LAEALRVVYRMRDLGIHPNLVIFNSLIKGFLDIGDSDGVDKALTM----MEESGVKPDVI 339
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLD 439
TF+T++ +S G +K + ++M K +P++ F L K + G+ + S L
Sbjct: 340 TFSTIMNGWSSAGRMDKCQEIFDDMLK-SGIEPDIHVFSILAKGFVRAGEPVKAESLL-- 396
Query: 440 DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQK 499
+ ++K+ + ++ +T +I G C A K E A+ +F+ M D++P +T ++ +
Sbjct: 397 NFMSKYGVRPNVVIFTTIISGWCTAGKMEKAWKVFEHMCDMDVSPNLKTFETLIWGYGEA 456
Query: 500 HMYDAAEKIEAVMKKL 515
AE+I +M+++
Sbjct: 457 KQPWRAEEILQMMEEM 472
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 94/201 (46%), Gaps = 2/201 (0%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVE-LARSVFLELKSCIPPNAHTF 240
G +A+R + G+ N N L+ G + + +++ + +S + P+ TF
Sbjct: 282 GNLAEALRVVYRMRDLGIHPNLVIFNSLIKGFLDIGDSDGVDKALTMMEESGVKPDVITF 341
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
+ ++GW R+D+ Q +M G P + +S + + + R K LL+ M
Sbjct: 342 STIMNGWSSAGRMDKCQEIFDDMLKSGIEPDIHVFSILAKGFVRAGEPVKAESLLNFMSK 401
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
G PNVV +TT++S +G E+A ++ E M + P+ + F LI+ G A +
Sbjct: 402 YGVRPNVVIFTTIISGWCTAGKMEKAWKVFEHMCDMDVSPNLKTFETLIWGYGEAKQPWR 461
Query: 361 AVYVYQVEMPENGVAPDTSTF 381
A + Q+ M E V P+ ST
Sbjct: 462 AEEILQM-MEEMNVVPENSTL 481
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 73/172 (42%), Gaps = 5/172 (2%)
Query: 144 LGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKN 202
+G +D+ ++EE K ++T +TI M +S AG+ + FD++ G+E +
Sbjct: 316 IGDSDGVDKALTMMEESGVKPDVITFSTI---MNGWSSAGRMDKCQEIFDDMLKSGIEPD 372
Query: 203 TETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQ 261
++L + G+ A S+ K + PN F I GWC ++++A +
Sbjct: 373 IHVFSILAKGFVRAGEPVKAESLLNFMSKYGVRPNVVIFTTIISGWCTAGKMEKAWKVFE 432
Query: 262 EMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
M P + ++ T+I Y + E+L M+ P T V
Sbjct: 433 HMCDMDVSPNLKTFETLIWGYGEAKQPWRAEEILQMMEEMNVVPENSTLKLV 484
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 126/519 (24%), Positives = 218/519 (42%), Gaps = 98/519 (18%)
Query: 79 SEDEVFQSLKQDHVCNAIQPSHYLVNKLIHR-FKDDWKSALGIFRWAGSCPGYEHSSEIY 137
S F S+ D V + + LV L R + + S L R AG P ++ Y
Sbjct: 140 SARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDP----NAVTY 195
Query: 138 EMMVDILGKVRQMDQMRALLEEMSKG----HIVTLNTIAKVMRRFSGAGQWEDAVRTFDE 193
+V + ++D+ L++ M +G ++VT N+ V+ AG+ EDA + FDE
Sbjct: 196 NTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNS---VVNGICKAGRMEDARKVFDE 252
Query: 194 LGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIH------- 245
+ GL + + N L+ CK G A SVF E+ + I P+ TF IH
Sbjct: 253 MVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGN 312
Query: 246 ----------------------------GWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
G+CK +D+A ++EM+ P V+ Y+
Sbjct: 313 LERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNA 372
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+I YC + EL+ EM+A+G P+VVTY+T++S K+GD A ++ ++M G
Sbjct: 373 LINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENG 432
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKA 397
PD+ ++ LI L R+ +A +++ M G+ PD T+ ++I G+ E+A
Sbjct: 433 VLPDAITYSSLIRVLCEEKRLGDAHVLFK-NMISLGLQPDEVTYTSLIDGHCKEGNVERA 491
Query: 398 FHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE------------------------- 432
+ +EM K P+V T+ L+ K+ +T E
Sbjct: 492 LSLHDEMVK-AGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMR 550
Query: 433 -----------------CLSQLLDDM------VNKHHLSLDITTYTLVIHGLCRANKCEW 469
C+ L+++ + + +LD + Y+++IHG CR
Sbjct: 551 CCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMK 610
Query: 470 AYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
A K+M+ P + ++ + +K M A+++
Sbjct: 611 ALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQV 649
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 173/367 (47%), Gaps = 5/367 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAV 188
GY S Y ++ L R +S G + T ++R G G ++A+
Sbjct: 118 GYAPSVLAYNAVLLALSDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEAL 177
Query: 189 RTFDELGTFGLEKNTETMNLLLDTLCKEGKVELA-RSVFLELKSCIPPNAHTFNIFIHGW 247
++ G + N T N L+ C+ G+V+ A R V + + + PN TFN ++G
Sbjct: 178 SVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGI 237
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
CK R+++A+ EM G P +SY+T++ YC+ + + EM +G P+V
Sbjct: 238 CKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDV 297
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
VT+T+++ + K+G+ E A+ + +M+ G + + F LI + + +A+ +
Sbjct: 298 VTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVR- 356
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKT 427
EM + + P +N +I + G ++A ++ EM + + KP+V T+ +L + K
Sbjct: 357 EMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREM-EAKGVKPDVVTYSTILSAYCKN 415
Query: 428 GKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
G T QL M+ L D TY+ +I LC + A++LFK MI + P
Sbjct: 416 GDTHSAF-QLNQQMLENGVLP-DAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEV 473
Query: 488 TCRLILD 494
T ++D
Sbjct: 474 TYTSLID 480
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 111/239 (46%), Gaps = 5/239 (2%)
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
G P V++Y+ ++ + + D M + G PNV TY ++ L G +EA
Sbjct: 118 GYAPSVLAYNAVLLAL-SDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 176
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
+ + M+ G P++ +N L+ RA V A + + M E G+ P+ TFN+++
Sbjct: 177 LSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDM-MREGGLKPNLVTFNSVVN 235
Query: 387 MFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHH 446
G E A V +EM K E P+ +++ L+ K G + E LS + +M K
Sbjct: 236 GICKAGRMEDARKVFDEMVK-EGLAPDGVSYNTLVGGYCKVGCSHEALS-VFAEMTRKGI 293
Query: 447 LSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
+ D+ T+T +IH +C+A E A L +EM + T ++D +K D A
Sbjct: 294 MP-DVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDA 351
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 155/352 (44%), Gaps = 41/352 (11%)
Query: 142 DILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEK 201
D L VR+M Q R + +V N + + + G+ ++A E+ G++
Sbjct: 350 DALLAVREMRQCRI------QPSVVCYNAL---INGYCMVGRMDEARELVREMEAKGVKP 400
Query: 202 NTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTI 260
+ T + +L CK G A + + L++ + P+A T++ I C+ R+ +A
Sbjct: 401 DVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLF 460
Query: 261 QEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKS 320
+ M G P ++Y+++I +C++ N + L DEM G P+VVTY+ +++ L+KS
Sbjct: 461 KNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKS 520
Query: 321 GDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA---------------SRVQEAVYVY 365
+EA R+ K+ P + ++ L+ A + EA VY
Sbjct: 521 ARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVY 580
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
Q + N D S ++ +I G+ KA ++M + PN + L++ F
Sbjct: 581 QSILDRNW-NLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGF-APNSTSTISLIRGLF 638
Query: 426 KTG---KTDECLSQLL------DDMVNKHHLSLDITTYTL-----VIHGLCR 463
+ G + D+ + QLL D +K + L++ + V+HG+ R
Sbjct: 639 EKGMVVEADQVIQQLLNCCSLADAEASKALIDLNLKEGNVDAVLDVLHGMAR 690
>gi|255660948|gb|ACU25643.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
Length = 484
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 191/389 (49%), Gaps = 14/389 (3%)
Query: 100 HYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEE 159
H LV ++H K + AL FRW +EH+ E + +++ILG+ +++ R +L +
Sbjct: 12 HELVYNVLHGAKKA-EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLD 70
Query: 160 MSKGHIVTLNTIAKVM-RRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
M K + + +M + AG +++V+ F ++ G+E+ ++ + L + + G+
Sbjct: 71 MPKKGLEWDEDLWVLMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGR 130
Query: 219 VELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
+A+ F ++ S I P HTFN I G+ +VD A + MK P VI+Y+T
Sbjct: 131 YMMAKRYFNKMLSEGIEPTRHTFNFMIWGFFLSGKVDTANRFFEXMKSREIMPDVITYNT 190
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+I Y R + EM+ + P VVTYTT++ ++A+R+ E+MK G
Sbjct: 191 MINGYYRVKKMEEXENYFMEMKGRNIEPTVVTYTTLIKGYVSVDRIDDALRLVEEMKGFG 250
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP-DTSTFNTMITMFSHHGHHEK 396
P++ ++ L+ L A ++ EA + + EM + +AP D S F +I+ G+ +
Sbjct: 251 INPNAITYSTLLPGLCNAEKMSEAQSILK-EMVDKYIAPKDNSIFLRLISGQCKVGNLDA 309
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK-------HHLSL 449
A VL+ M +L + L+++C K G+ D + + LD ++ K L +
Sbjct: 310 AADVLKVMIRLS-VPTEAGHYGVLIENCCKAGQYDRAV-KFLDKVIEKDIILRPQSSLHM 367
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMI 478
+ + Y +I LC + A L ++++
Sbjct: 368 EPSAYNPLIEYLCNNGQTAKAETLVRQLM 396
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 147/338 (43%), Gaps = 6/338 (1%)
Query: 180 GAGQWEDAVRTFDELGTFGL-EKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNA 237
GA + E A++ F + L E N ET +++ L + K+ AR + L++ K + +
Sbjct: 21 GAKKAEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDE 80
Query: 238 HTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDE 297
+ + I + K V E+ Q+M+ G + SY + + R+ + ++
Sbjct: 81 DLWVLMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNK 140
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
M ++G P T+ ++ SG + A R E MK PD +N +I R +
Sbjct: 141 MLSEGIEPTRHTFNFMIWGFFLSGKVDTANRFFEXMKSREIMPDVITYNTMINGYYRVKK 200
Query: 358 VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTF 417
++E Y +EM + P T+ T+I + + A ++EEM PN T+
Sbjct: 201 MEEXEN-YFMEMKGRNIEPTVVTYTTLIKGYVSVDRIDDALRLVEEMKGF-GINPNAITY 258
Query: 418 HPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
LL K E S +L +MV+K+ D + + +I G C+ + A + K M
Sbjct: 259 STLLPGLCNAEKMSEAQS-ILKEMVDKYIAPKDNSIFLRLISGQCKVGNLDAAADVLKVM 317
Query: 478 IGHDITPRYQTCRLILDEVKQKHMYDAAEK-IEAVMKK 514
I + ++++ + YD A K ++ V++K
Sbjct: 318 IRLSVPTEAGHYGVLIENCCKAGQYDRAVKFLDKVIEK 355
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 138/312 (44%), Gaps = 9/312 (2%)
Query: 208 LLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKG 265
L+ + L K E A F +E + N T I + ++++ A+ + +M
Sbjct: 14 LVYNVLHGAKKAEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPK 73
Query: 266 HGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEE 325
G + +I SY + + +L +M+ G + +Y + + + G +
Sbjct: 74 KGLEWDEDLWVLMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRYMM 133
Query: 326 AIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMI 385
A R KM G +P FN +I+ + +V A ++ M + PD T+NTMI
Sbjct: 134 AKRYFNKMLSEGIEPTRHTFNFMIWGFFLSGKVDTANRFFEX-MKSREIMPDVITYNTMI 192
Query: 386 TMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKH 445
+ E+ + EM K + +P V T+ L+K + D+ L +L+++M
Sbjct: 193 NGYYRVKKMEEXENYFMEM-KGRNIEPTVVTYTTLIKGYVSVDRIDDAL-RLVEEM-KGF 249
Query: 446 HLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT--CRLILDEVKQKHMYD 503
++ + TY+ ++ GLC A K A + KEM+ I P+ + RLI + K ++ D
Sbjct: 250 GINPNAITYSTLLPGLCNAEKMSEAQSILKEMVDKYIAPKDNSIFLRLISGQCKVGNL-D 308
Query: 504 AAEKIEAVMKKL 515
AA + VM +L
Sbjct: 309 AAADVLKVMIRL 320
>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 174/360 (48%), Gaps = 6/360 (1%)
Query: 127 CPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWED 186
C G Y++++D L K+++++ ++LL EM + N ++ G+ D
Sbjct: 270 CKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNAD 329
Query: 187 AVRTF-DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFI 244
A + E+ + G+ + + + KEG +E A+++F + S + P A + I
Sbjct: 330 AAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLI 389
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
G+C+ V + + EMK +Y T+++ C + Y ++ EM A GC
Sbjct: 390 EGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCR 449
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
PNVV YTT++ ++ F +A+R+ ++MK G PD +N LI L +A R+ EA
Sbjct: 450 PNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEA-RS 508
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
+ VEM ENG+ P+ T+ I+ + A ++EM + PN L+
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMREC-GVLPNKVLCTGLINEY 567
Query: 425 FKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
K GK E S MV++ L D TYT++++GL + +K + A +F+EM G I P
Sbjct: 568 CKKGKVIEACSA-YRSMVDQGILG-DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAP 625
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 156/326 (47%), Gaps = 17/326 (5%)
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIH 245
A R+ + G G + +T +L++ L K KV+ A +F E++ I P+ ++ + I+
Sbjct: 579 AYRSMVDQGILG---DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLIN 635
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G+ K+ + +A EM G P VI Y+ ++ +CR K ELLDEM +G P
Sbjct: 636 GFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHP 695
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N VTY T++ KSGD EA R+ ++MK+ G PDS + L+ R + V+ A+ ++
Sbjct: 696 NAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF 755
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKL------EHCKPNVQTFHP 419
+ G A T+ FN +I G E VL N+L KPN T++
Sbjct: 756 GTN--KKGCASSTAPFNALINWVFKFGKTELKTEVL---NRLMDGSFDRFGKPNDVTYNI 810
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
++ K G E +L M N +L + TYT +++G + + + +F E I
Sbjct: 811 MIDYLCKEGNL-EAAKELFHQMQN-ANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIA 868
Query: 480 HDITPRYQTCRLILDEVKQKHMYDAA 505
I P + +I++ ++ M A
Sbjct: 869 AGIEPDHIMYSVIINAFLKEGMTTKA 894
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 147/302 (48%), Gaps = 5/302 (1%)
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSC 232
+++ F ++ DA+R E+ G+ + N L+ L K +++ ARS +E+ ++
Sbjct: 458 LIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENG 517
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
+ PNA T+ FI G+ + + A ++EM+ G P + + +I YC++ +
Sbjct: 518 LKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEAC 577
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
M QG + TYT +M+ L K+ ++A I +M+ G PD + LI
Sbjct: 578 SAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGF 637
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
+ +Q+A ++ EM E G+ P+ +N ++ F G EKA +L+EM+ ++ P
Sbjct: 638 SKLGNMQKASSIFD-EMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMS-VKGLHP 695
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
N T+ ++ K+G E +L D+M K L D YT ++ G CR N E A
Sbjct: 696 NAVTYCTIIDGYCKSGDLAEAF-RLFDEMKLK-GLVPDSFVYTTLVDGCCRLNDVERAIT 753
Query: 473 LF 474
+F
Sbjct: 754 IF 755
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 146/328 (44%), Gaps = 26/328 (7%)
Query: 202 NTETMNLLLDTLCKEGKVELARSVF-----------------LELKSC-----IPPNAHT 239
+ +T ++L+ C+ G V+L + V L+LK + P +T
Sbjct: 220 DVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYT 279
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+++ I G CKI R+++A+ + EM G +YS +I + N L+ EM
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMV 339
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
+ G Y + ++K G E+A + + M G P ++ + LI R V+
Sbjct: 340 SHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVR 399
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
+ Y VEM + + T+ T++ G + A+++++EM C+PNV +
Sbjct: 400 QG-YELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIA-SGCRPNVVIYTT 457
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
L+K+ + + + + ++L +M + ++ DI Y +I GL +A + + A EM+
Sbjct: 458 LIKTFLQNSRFGDAM-RVLKEM-KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVE 515
Query: 480 HDITPRYQTCRLILDEVKQKHMYDAAEK 507
+ + P T + + + +A+K
Sbjct: 516 NGLKPNAFTYGAFISGYIEASEFASADK 543
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 154/367 (41%), Gaps = 24/367 (6%)
Query: 81 DEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSC------PGYEHSS 134
+E+F+ ++ I P + LI+ F S LG + A S G +
Sbjct: 612 EEIFREMRG----KGIAPDVFSYGVLINGF-----SKLGNMQKASSIFDEMVEEGLTPNV 662
Query: 135 EIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDE 193
IY M++ + ++++ + LL+EMS KG T ++ + +G +A R FDE
Sbjct: 663 IIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDE 722
Query: 194 LGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRV 253
+ GL ++ L+D C+ VE A ++F K + FN I+ K +
Sbjct: 723 MKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKT 782
Query: 254 DEAQWTIQEMKGHG----CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
+ + + P ++Y+ +I C++ N EL +MQ P V+T
Sbjct: 783 ELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVIT 842
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM 369
YT++++ K G E + ++ G +PD ++ +I + +A+ +
Sbjct: 843 YTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMF 902
Query: 370 PEN----GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
+N G ST +++ F+ G E A V+E M +L++ + + +SC
Sbjct: 903 AKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCI 962
Query: 426 KTGKTDE 432
+ + E
Sbjct: 963 SSNQRVE 969
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 85/429 (19%), Positives = 151/429 (35%), Gaps = 49/429 (11%)
Query: 112 DDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTI 171
DD L F W S E + + + L ++ +++E M
Sbjct: 75 DDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERM----------- 123
Query: 172 AKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF----- 226
+ R + A W VR E G + +L D + +E A VF
Sbjct: 124 --IERNWPVAEVWSSIVRCSQEF--VGKSDDGVLFGILFDGYIAKEYIEEAVFVFSSSMG 179
Query: 227 LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQ- 285
LEL P + + + NR+D + M V +Y +I ++CR
Sbjct: 180 LEL----VPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAG 235
Query: 286 --------------------YNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEE 325
N +L + M +G P TY ++ L K E+
Sbjct: 236 NVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLED 295
Query: 326 AIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMI 385
A + +M +G D+ ++ LI L + A + EM +G+ ++ I
Sbjct: 296 AKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVH-EMVSHGINIKPYMYDCCI 354
Query: 386 TMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKH 445
+ S G EKA + + M P Q + L++ + + L++ + K
Sbjct: 355 CVMSKEGVMEKAKALFDGMIA-SGLIPQAQAYASLIEGYCREKNVRQGYELLVE--MKKR 411
Query: 446 HLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
++ + TY V+ G+C + + AY + KEMI P ++ Q + A
Sbjct: 412 NIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDA 471
Query: 506 EKIEAVMKK 514
++ MK+
Sbjct: 472 MRVLKEMKE 480
>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 166/363 (45%), Gaps = 36/363 (9%)
Query: 172 AKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LK 230
+K++ + + + + ++ +FG+ NT T+N+L+++ C ++ A SV + LK
Sbjct: 58 SKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILK 117
Query: 231 SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSK 290
P+ TF I G C ++ EA +M G G P V++Y T+I C+ N S
Sbjct: 118 LGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTST 177
Query: 291 VYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIY 350
L M+ + C P VV Y+T++ L K EA+ + M G P++ ++ LI+
Sbjct: 178 AIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIH 237
Query: 351 TLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHC 410
L +EA+ ++ M + PD TFNT++ G KA +V++ M +
Sbjct: 238 GLCILGHWKEAIRLFYA-MIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQ-SDL 295
Query: 411 KPNVQTFHPLLKS-CFKT--GKT------------------------DECLSQLLD---- 439
KP+V T++ L+ C ++ GKT C Q++D
Sbjct: 296 KPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMG 355
Query: 440 --DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVK 497
+ +++ L D TY +IHGLC + A LF EM+ + P T R++ D +
Sbjct: 356 LFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLC 415
Query: 498 QKH 500
+ H
Sbjct: 416 KNH 418
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 179/375 (47%), Gaps = 6/375 (1%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLN-TIAKVMRRFSGAGQWEDAVRTFDEL 194
+Y ++D L K RQ+ + +L +M I N T + ++ G W++A+R F +
Sbjct: 196 VYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAM 255
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRV 253
+ + T N L+D LCKEG V A V + ++S + P+ T+N + G C + +
Sbjct: 256 IHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEM 315
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
+ M GC P VISY+T+I YC+ K L +EM QG P+ VTY T+
Sbjct: 316 GKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTL 375
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
+ L G +AI + +M + G PD + L L + R+ EA+ + +V N
Sbjct: 376 IHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTN- 434
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
+ PD ++ ++ G E A + +++ + P+V+T+ ++ + G E
Sbjct: 435 LDPDIHIYSIVMDGMCRAGELEAARDLFSKLSS-KGLHPDVRTYTIMINGLCQQGLLAEA 493
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
S+L +M +++ S + TY L+ G R N+ A LF+EM+ + T L++
Sbjct: 494 -SKLFGEM-DENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLV 551
Query: 494 DEVKQKHMYDAAEKI 508
+ + + + ++I
Sbjct: 552 EMLSDDGLDQSVKQI 566
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/380 (23%), Positives = 167/380 (43%), Gaps = 44/380 (11%)
Query: 86 SLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDI 143
SL D + I P+++ + LIH WK A+ +F Y M+
Sbjct: 215 SLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLF---------------YAMI--- 256
Query: 144 LGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNT 203
R ++ + +T NT+ + + G A D + L+ +
Sbjct: 257 ---------HRKIMPDQ-----LTFNTLVDALCK---EGMVVKAHYVVDVMIQSDLKPDV 299
Query: 204 ETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQ 261
T N L+D C ++ +VF + K C+ P+ ++ I+G+CKI +D+A +
Sbjct: 300 VTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCV-PSVISYTTLINGYCKIQIMDKAMGLFE 358
Query: 262 EMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSG 321
EM G P ++Y+T+I C L EM G P++VTY + YL K+
Sbjct: 359 EMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNH 418
Query: 322 DFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTF 381
EA+ + + ++ PD ++ ++ + RA ++ A ++ ++ G+ PD T+
Sbjct: 419 RLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFS-KLSSKGLHPDVRTY 477
Query: 382 NTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDM 441
MI G +A + EM++ C PN T++ + + + +T + QL +M
Sbjct: 478 TIMINGLCQQGLLAEASKLFGEMDE-NGCSPNACTYNLITRGFLRNNETLRAI-QLFQEM 535
Query: 442 VNKHHLSLDITTYTLVIHGL 461
+++ S+D++T TL++ L
Sbjct: 536 LSR-GFSIDVSTTTLLVEML 554
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 117/264 (44%), Gaps = 4/264 (1%)
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
+N +D+A M P ++ +S ++ S R ++S V L +M + G P N
Sbjct: 31 NVNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTY 90
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
T +++ A + + +G +P + F LI L ++ EA+ ++ +
Sbjct: 91 TLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFD-K 149
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M G PD T+ T+I G+ A L M + +C+P V + ++ S K
Sbjct: 150 MTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQ-RNCRPTVVVYSTIIDSLCKDR 208
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ E LS L DM+ K +S + TY+ +IHGLC + A LF MI I P T
Sbjct: 209 QLTEALS-LFSDMLAKG-ISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLT 266
Query: 489 CRLILDEVKQKHMYDAAEKIEAVM 512
++D + ++ M A + VM
Sbjct: 267 FNTLVDALCKEGMVVKAHYVVDVM 290
>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g61990, mitochondrial; Flags: Precursor
gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 974
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 174/360 (48%), Gaps = 6/360 (1%)
Query: 127 CPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWED 186
C G Y++++D L K+++++ ++LL EM + N ++ G+ D
Sbjct: 270 CKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNAD 329
Query: 187 AVRTF-DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFI 244
A + E+ + G+ + + + KEG +E A+++F + S + P A + I
Sbjct: 330 AAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLI 389
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
G+C+ V + + EMK +Y T+++ C + Y ++ EM A GC
Sbjct: 390 EGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCR 449
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
PNVV YTT++ ++ F +A+R+ ++MK G PD +N LI L +A R+ EA
Sbjct: 450 PNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEA-RS 508
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
+ VEM ENG+ P+ T+ I+ + A ++EM + PN L+
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMREC-GVLPNKVLCTGLINEY 567
Query: 425 FKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
K GK E S MV++ L D TYT++++GL + +K + A +F+EM G I P
Sbjct: 568 CKKGKVIEACSA-YRSMVDQGILG-DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAP 625
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 156/326 (47%), Gaps = 17/326 (5%)
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIH 245
A R+ + G G + +T +L++ L K KV+ A +F E++ I P+ ++ + I+
Sbjct: 579 AYRSMVDQGILG---DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLIN 635
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G+ K+ + +A EM G P VI Y+ ++ +CR K ELLDEM +G P
Sbjct: 636 GFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHP 695
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N VTY T++ KSGD EA R+ ++MK+ G PDS + L+ R + V+ A+ ++
Sbjct: 696 NAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF 755
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKL------EHCKPNVQTFHP 419
+ G A T+ FN +I G E VL N+L KPN T++
Sbjct: 756 GTN--KKGCASSTAPFNALINWVFKFGKTELKTEVL---NRLMDGSFDRFGKPNDVTYNI 810
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
++ K G E +L M N +L + TYT +++G + + + +F E I
Sbjct: 811 MIDYLCKEGNL-EAAKELFHQMQN-ANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIA 868
Query: 480 HDITPRYQTCRLILDEVKQKHMYDAA 505
I P + +I++ ++ M A
Sbjct: 869 AGIEPDHIMYSVIINAFLKEGMTTKA 894
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 147/302 (48%), Gaps = 5/302 (1%)
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSC 232
+++ F ++ DA+R E+ G+ + N L+ L K +++ ARS +E+ ++
Sbjct: 458 LIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENG 517
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
+ PNA T+ FI G+ + + A ++EM+ G P + + +I YC++ +
Sbjct: 518 LKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEAC 577
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
M QG + TYT +M+ L K+ ++A I +M+ G PD + LI
Sbjct: 578 SAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGF 637
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
+ +Q+A ++ EM E G+ P+ +N ++ F G EKA +L+EM+ ++ P
Sbjct: 638 SKLGNMQKASSIFD-EMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMS-VKGLHP 695
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
N T+ ++ K+G E +L D+M K L D YT ++ G CR N E A
Sbjct: 696 NAVTYCTIIDGYCKSGDLAEAF-RLFDEMKLK-GLVPDSFVYTTLVDGCCRLNDVERAIT 753
Query: 473 LF 474
+F
Sbjct: 754 IF 755
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 146/328 (44%), Gaps = 26/328 (7%)
Query: 202 NTETMNLLLDTLCKEGKVELARSVF-----------------LELKSC-----IPPNAHT 239
+ +T ++L+ C+ G V+L + V L+LK + P +T
Sbjct: 220 DVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYT 279
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+++ I G CKI R+++A+ + EM G +YS +I + N L+ EM
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMV 339
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
+ G Y + ++K G E+A + + M G P ++ + LI R V+
Sbjct: 340 SHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVR 399
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
+ Y VEM + + T+ T++ G + A+++++EM C+PNV +
Sbjct: 400 QG-YELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIA-SGCRPNVVIYTT 457
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
L+K+ + + + + ++L +M + ++ DI Y +I GL +A + + A EM+
Sbjct: 458 LIKTFLQNSRFGDAM-RVLKEM-KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVE 515
Query: 480 HDITPRYQTCRLILDEVKQKHMYDAAEK 507
+ + P T + + + +A+K
Sbjct: 516 NGLKPNAFTYGAFISGYIEASEFASADK 543
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 154/367 (41%), Gaps = 24/367 (6%)
Query: 81 DEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSC------PGYEHSS 134
+E+F+ ++ I P + LI+ F S LG + A S G +
Sbjct: 612 EEIFREMRG----KGIAPDVFSYGVLINGF-----SKLGNMQKASSIFDEMVEEGLTPNV 662
Query: 135 EIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDE 193
IY M++ + ++++ + LL+EMS KG T ++ + +G +A R FDE
Sbjct: 663 IIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDE 722
Query: 194 LGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRV 253
+ GL ++ L+D C+ VE A ++F K + FN I+ K +
Sbjct: 723 MKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKT 782
Query: 254 DEAQWTIQEMKGHG----CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
+ + + P ++Y+ +I C++ N EL +MQ P V+T
Sbjct: 783 ELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVIT 842
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM 369
YT++++ K G E + ++ G +PD ++ +I + +A+ +
Sbjct: 843 YTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMF 902
Query: 370 PEN----GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
+N G ST +++ F+ G E A V+E M +L++ + + +SC
Sbjct: 903 AKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCI 962
Query: 426 KTGKTDE 432
+ + E
Sbjct: 963 SSNQRVE 969
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 86/429 (20%), Positives = 152/429 (35%), Gaps = 49/429 (11%)
Query: 112 DDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTI 171
DD L F W S E + + + L ++ +++E M
Sbjct: 75 DDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERM----------- 123
Query: 172 AKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF----- 226
+ R + A W VR E G + +L D +G +E A VF
Sbjct: 124 --IERNWPVAEVWSSIVRCSQEF--VGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMG 179
Query: 227 LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQ- 285
LEL P + + + NR+D + M V +Y +I ++CR
Sbjct: 180 LEL----VPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAG 235
Query: 286 --------------------YNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEE 325
N +L + M +G P TY ++ L K E+
Sbjct: 236 NVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLED 295
Query: 326 AIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMI 385
A + +M +G D+ ++ LI L + A + EM +G+ ++ I
Sbjct: 296 AKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVH-EMVSHGINIKPYMYDCCI 354
Query: 386 TMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKH 445
+ S G EKA + + M P Q + L++ + + L++ + K
Sbjct: 355 CVMSKEGVMEKAKALFDGMIA-SGLIPQAQAYASLIEGYCREKNVRQGYELLVE--MKKR 411
Query: 446 HLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
++ + TY V+ G+C + + AY + KEMI P ++ Q + A
Sbjct: 412 NIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDA 471
Query: 506 EKIEAVMKK 514
++ MK+
Sbjct: 472 MRVLKEMKE 480
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 168/380 (44%), Gaps = 47/380 (12%)
Query: 131 EHSSEIYEMMVDILGKVRQMDQMRALLEEMSK----GHIVTLNTIAKVMRRFSGAGQWED 186
E ++ +MV K Q ++ ++ EM K +VT N + R AG E
Sbjct: 156 EVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFR---AGDVEA 212
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIH 245
A+ D + + G++ T N +L L + G+ + AR VF + +C + P+ +FN+ I
Sbjct: 213 AMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIG 272
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G+C+ ++EA +EM+G P V+S+S +I + R+ E L EM+ G P
Sbjct: 273 GFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMP 332
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
+ V YT V+ ++G EA+R+ ++M G PD +N L+ L + R+ +A +
Sbjct: 333 DGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELL 392
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
EM E GV PD TF T+I + G+ EKA
Sbjct: 393 N-EMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFF------------------------ 427
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
D ++ L DI TY +I G+CR A L+ +M +I P
Sbjct: 428 --------------DTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPN 473
Query: 486 YQTCRLILDEVKQKHMYDAA 505
+ T +++D +K D A
Sbjct: 474 HVTYSILIDSHCEKGQVDNA 493
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 186/398 (46%), Gaps = 49/398 (12%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKG---HIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
+ +MVD + ++ AL++ M SKG +VT N++ K + R G+W+ A F
Sbjct: 197 HNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLR---NGRWDKAREVFR 253
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-----------SCI-------- 233
+ G+ + + N+L+ C+ G++E A + E++ SC+
Sbjct: 254 AMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRG 313
Query: 234 -----------------PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYS 276
P+ + + I G+C+ + EA EM GC P V++Y+
Sbjct: 314 EMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYN 373
Query: 277 TIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIV 336
T++ C++ S ELL+EM+ +G PP++ T+TT++ + G+ E+A++ + +
Sbjct: 374 TLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQ 433
Query: 337 GSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEK 396
+PD +N LI + R + +A ++ +M + P+ T++ +I G +
Sbjct: 434 RLRPDIVTYNTLIDGMCRQGDLGKANELWD-DMHSREIFPNHVTYSILIDSHCEKGQVDN 492
Query: 397 AFHVLEEM-NKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYT 455
AF L+EM NK PN+ T++ ++K ++G + Q L M + + D+ TY
Sbjct: 493 AFAFLDEMVNK--GIVPNIMTYNSIIKGYCRSGNVSKG-QQFLPKMRHDKVMP-DLITYN 548
Query: 456 LVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
+IHG + K A+ L K M ++ P T +I+
Sbjct: 549 TLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMII 586
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/436 (24%), Positives = 200/436 (45%), Gaps = 18/436 (4%)
Query: 68 DVIISKVHVGS----SEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIF 121
DV+ V V + + E +L V I+P N ++ W A +F
Sbjct: 193 DVVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVF 252
Query: 122 RWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAK--VMRRFS 179
R +C G + M++ + ++++ +EM +G VT + ++ ++ F+
Sbjct: 253 RAMDAC-GVAPDVRSFNMLIGGFCRAGELEEALRFYKEM-RGRRVTPDVVSFSCLIGLFT 310
Query: 180 GAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS--CIPPNA 237
G+ + A E+ FGL + +++ C+ G + A V E+ + C+P +
Sbjct: 311 RRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLP-DV 369
Query: 238 HTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDE 297
T+N ++G CK R+ +A+ + EMK G P + +++T+I YCR N K + D
Sbjct: 370 VTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDT 429
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
+ Q P++VTY T++ + + GD +A + + M P+ ++ LI + +
Sbjct: 430 ISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQ 489
Query: 358 VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTF 417
V A + + EM G+ P+ T+N++I + G+ K L +M + + P++ T+
Sbjct: 490 VDNA-FAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKM-RHDKVMPDLITY 547
Query: 418 HPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
+ L+ K GK E + LL M N++ + D TY ++I G + A ++K+M
Sbjct: 548 NTLIHGYVKEGKMHEAFN-LLKIMENEN-VQPDAVTYNMIISGFSVHGNMQEADWVYKKM 605
Query: 478 IGHDITP-RYQTCRLI 492
I P RY +I
Sbjct: 606 GARGIEPDRYTYMSMI 621
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 140/270 (51%), Gaps = 3/270 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +++ L K R++ LL EM +G L T ++ + G E A++ FD +
Sbjct: 372 YNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTIS 431
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVD 254
L + T N L+D +C++G + A ++ ++ S I PN T++I I C+ +VD
Sbjct: 432 DQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVD 491
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
A + EM G P +++Y++II+ YCR N SK + L +M+ P+++TY T++
Sbjct: 492 NAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLI 551
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
K G EA + + M+ +PD+ +N +I +QEA +VY+ +M G+
Sbjct: 552 HGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYK-KMGARGI 610
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
PD T+ +MI G+ +K+F + +EM
Sbjct: 611 EPDRYTYMSMINGHVVAGNSKKSFQLHDEM 640
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 139/315 (44%), Gaps = 38/315 (12%)
Query: 227 LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQY 286
L L S N +T NI +H +CK + E I EM+ P V++++ ++ + R
Sbjct: 149 LVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAG 208
Query: 287 NFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFN 346
+ L+D M ++G P +VTY +V+ L ++G +++A + M G PD R FN
Sbjct: 209 DVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFN 268
Query: 347 CLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNK 406
LI RA ++EA+ Y+ EM V PD +F+ +I +F+ G + A L EM +
Sbjct: 269 MLIGGFCRAGELEEALRFYK-EMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMRE 327
Query: 407 LE----------------------------------HCKPNVQTFHPLLKSCFKTGKTDE 432
C P+V T++ LL K + +
Sbjct: 328 FGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSD 387
Query: 433 CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLI 492
+LL++M + + D+ T+T +IHG CR E A F + + P T +
Sbjct: 388 A-EELLNEM-KERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTL 445
Query: 493 LDEV-KQKHMYDAAE 506
+D + +Q + A E
Sbjct: 446 IDGMCRQGDLGKANE 460
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 82/164 (50%), Gaps = 1/164 (0%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTF 240
GQ ++A DE+ G+ N T N ++ C+ G V + +++ + P+ T+
Sbjct: 488 GQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITY 547
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
N IHG+ K ++ EA ++ M+ P ++Y+ II + N + + +M A
Sbjct: 548 NTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGA 607
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRF 344
+G P+ TY ++++ +G+ +++ ++ ++M G PD +F
Sbjct: 608 RGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPDDKF 651
>gi|357138018|ref|XP_003570595.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Brachypodium distachyon]
Length = 548
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/441 (25%), Positives = 190/441 (43%), Gaps = 49/441 (11%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILG----KVRQ-------M 150
LV+ ++HR + + K A F WA YEH Y ++D L K RQ +
Sbjct: 107 LVSDVMHRLRYEEKLAFRFFAWASQQDNYEHDQAAYNEVIDTLSGTRYKARQFGVLCDVL 166
Query: 151 DQMR-------------ALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTF 197
D M+ A+L ++ H+ L +AK R +RT E
Sbjct: 167 DHMKRHRTRSVPVEDLLAILRAYTEKHLTNLRKLAKKRRV---------RMRTPPE---- 213
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQ 257
T+ +N+LLD CK G V A +VF +K + NA T+NI GWC+ +A
Sbjct: 214 -----TDALNILLDAFCKCGMVREAETVFGRVKRKLQGNAETYNILFFGWCRARDPKKAM 268
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG---CPPNVVTYTTVM 314
++EM P +Y I S+C S+ EL + M+ +G P Y+ ++
Sbjct: 269 KVLEEMILMKHAPESFTYIAAIDSFCSAGLVSEAKELFEFMRTEGSSISSPTAKAYSVMI 328
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
L K+ ++ + M +G PD F LI + ++ A +V + EM + G
Sbjct: 329 VALVKADRMDDCFELISDMIKLGCMPDVSTFKDLIEGMCLVDKIDTAYFVLE-EMGKAGF 387
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
PD T+N + + + + A + E M + HC+P+V T++ L+ F+ + L
Sbjct: 388 PPDIVTYNCFLEVLCNLQKADDALKLCERMIE-AHCEPSVHTYNMLMVMFFQMREPHRAL 446
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
L+ ++K + TY ++I GL + E A L E+I HD+ Y+ I+
Sbjct: 447 DIWLE--MDKRGCRRAVDTYEIMIDGLFDCGRTEDATNLLDEVINHDMKLSYKKFDAIML 504
Query: 495 EVKQKHMYDAAEKIEAVMKKL 515
++ A ++ M+K
Sbjct: 505 QLSAVGNLGAIHRLSEHMRKF 525
>gi|255660870|gb|ACU25604.1| pentatricopeptide repeat-containing protein [Verbena halei]
Length = 476
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 193/390 (49%), Gaps = 16/390 (4%)
Query: 100 HYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEE 159
H LV ++H K + A FRW +EH+ E + +++ILG+ +++ R +L +
Sbjct: 4 HELVYNVLHSSKTS-EHAFHFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLD 62
Query: 160 M-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
M KG + ++ + G +++V+ F ++ G+E+ ++ N L + + G+
Sbjct: 63 MPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGR 122
Query: 219 VELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
+ + F + L I P HTFN+ I G+ +V+ A ++MK P V++Y+T
Sbjct: 123 YMMGKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETAIRFFEDMKSREISPDVVTYNT 182
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+I Y R + + EM+ + P VVTYTT++ ++A+R+ E+MK G
Sbjct: 183 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFG 242
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP-DTSTFNTMITMFSHHGHHEK 396
+KP++ ++ L+ L A ++ EA + + EM + +AP D S F +I+ G+ +
Sbjct: 243 TKPNAITYSTLLPGLCNAEKMSEARVILK-EMMDKYLAPTDNSIFMRLISSHCKSGNLDA 301
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCF-KTGKTDECLSQLLDDMVNK-------HHLS 448
A VL+ M +L P + LL F K G+ D+ + +LLD ++ K L
Sbjct: 302 AADVLKAMIRL--SVPTEAGHYGLLIENFCKAGQYDKAV-KLLDKLIEKDIMLRPQSTLH 358
Query: 449 LDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
L+ + + +I LC + A L ++++
Sbjct: 359 LEPSAHNPMIEYLCNNGQASKAETLVRQLM 388
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 135/311 (43%), Gaps = 4/311 (1%)
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQ 257
E N ET +++ L + K+ AR + L++ K + + + + I + K V E+
Sbjct: 33 FEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESV 92
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
Q+M+ G + SY+ + + R+ + ++M ++G P T+ ++
Sbjct: 93 KMFQKMEELGVERTIKSYNALFKVILRRGRYMMGKRYFNKMLSEGIEPTRHTFNVMIWGF 152
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
SG E AIR E MK PD +N +I R +++EA Y VEM + P
Sbjct: 153 FLSGKVETAIRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEK-YFVEMKGRNIEPT 211
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
T+ T+I + + A ++EEM KPN T+ LL K E +
Sbjct: 212 VVTYTTLIKGYVSVDQVDDALRLVEEMKGF-GTKPNAITYSTLLPGLCNAEKMSEA-RVI 269
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVK 497
L +M++K+ D + + +I C++ + A + K MI + L+++
Sbjct: 270 LKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGLLIENFC 329
Query: 498 QKHMYDAAEKI 508
+ YD A K+
Sbjct: 330 KAGQYDKAVKL 340
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 126/267 (47%), Gaps = 6/267 (2%)
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
+ ++++ A+ + +M G + +I SY ++ + ++ +M+ G +
Sbjct: 49 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIK 108
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
+Y + + + G + R KM G +P FN +I+ + +V+ A+ ++ +
Sbjct: 109 SYNALFKVILRRGRYMMGKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETAIRFFE-D 167
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M ++PD T+NTMI + E+A EM K + +P V T+ L+K
Sbjct: 168 MKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEM-KGRNIEPTVVTYTTLIKGYVSVD 226
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ D+ L +L+++M + TY+ ++ GLC A K A ++ KEM+ + P +
Sbjct: 227 QVDDAL-RLVEEM-KGFGTKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNS 284
Query: 489 C--RLILDEVKQKHMYDAAEKIEAVMK 513
RLI K ++ AA+ ++A+++
Sbjct: 285 IFMRLISSHCKSGNLDAAADVLKAMIR 311
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 5/205 (2%)
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N T+ ++ L ++ A I M G + D + +I + G+ VQE+V ++
Sbjct: 36 NRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMF 95
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
Q +M E GV ++N + + G + +M E +P TF+ ++ F
Sbjct: 96 Q-KMEELGVERTIKSYNALFKVILRRGRYMMGKRYFNKMLS-EGIEPTRHTFNVMIWGFF 153
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
+GK + + + +DM ++ +S D+ TY +I+G R K E A F EM G +I P
Sbjct: 154 LSGKVETAI-RFFEDMKSRE-ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPT 211
Query: 486 YQT-CRLILDEVKQKHMYDAAEKIE 509
T LI V + DA +E
Sbjct: 212 VVTYTTLIKGYVSVDQVDDALRLVE 236
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/314 (30%), Positives = 154/314 (49%), Gaps = 6/314 (1%)
Query: 173 KVMRRFSGAGQWEDAVRTF-DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-K 230
K++ GQ+ D V + ++ GL N T+++L++ +V+LA SV ++ K
Sbjct: 102 KLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIK 161
Query: 231 SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSK 290
+ P TF I+ CK+ + +A +M GC P V +Y+TII C+ +
Sbjct: 162 LGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAA 221
Query: 291 VYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIY 350
LL +M+ GC PNVVTY+T++ K EA+ I MK+ G PD +N LI
Sbjct: 222 AAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQ 281
Query: 351 TLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHC 410
L S+ +EA + EM + PD TFN ++ G +A VL+ M ++
Sbjct: 282 GLCNFSQWKEASALLN-EMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEM-GV 339
Query: 411 KPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWA 470
+P+V T+ L+ + E +L D M+ K D+ +Y ++I+G C+ + + A
Sbjct: 340 EPDVVTYSSLMYGYSLRSEVVEA-RKLFDAMITK-GCKPDVFSYNILINGYCKVKRIDEA 397
Query: 471 YLLFKEMIGHDITP 484
LF EMI +TP
Sbjct: 398 KQLFNEMIHQGLTP 411
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 177/346 (51%), Gaps = 7/346 (2%)
Query: 170 TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL 229
T++ ++ FS + + A ++ GL+ T L++ LCK GK A +F ++
Sbjct: 135 TLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDM 194
Query: 230 --KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYN 287
+ C P+ +T+ I+G CKI A +++M+ GC P V++YSTII S+ +
Sbjct: 195 VARGC-RPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRR 253
Query: 288 FSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNC 347
++ ++ M+ +G P++ TY +++ L ++EA + +M+ + PD FN
Sbjct: 254 VNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNV 313
Query: 348 LIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKL 407
L+ T+ + +V EA V + M E GV PD T+++++ +S +A + + M
Sbjct: 314 LVDTICKEGKVSEAQGVLKT-MTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMIT- 371
Query: 408 EHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKC 467
+ CKP+V +++ L+ K + DE QL ++M+++ L+ + +Y +IHGLC+
Sbjct: 372 KGCKPDVFSYNILINGYCKVKRIDEA-KQLFNEMIHQG-LTPNNVSYNTLIHGLCQLGSL 429
Query: 468 EWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
A LFK M + P T ++LD ++ + A ++ M+
Sbjct: 430 REARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQ 475
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 172/346 (49%), Gaps = 12/346 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKG----HIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y +++ L K+ + LL++M + ++VT +TI R+ + +A+ F
Sbjct: 206 YTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRK---DRRVNEALDIFS 262
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKIN 251
+ G+ + T N L+ LC + + A ++ E++S I P+ TFN+ + CK
Sbjct: 263 YMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEG 322
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
+V EAQ ++ M G P V++YS+++ Y + + +L D M +GC P+V +Y
Sbjct: 323 KVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYN 382
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
+++ K +EA ++ +M G P++ +N LI+ L + ++EA +++ M
Sbjct: 383 ILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFK-NMHT 441
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
NG P+ T++ ++ F G+ KAF + M + KPN+ ++ L+ + K+G
Sbjct: 442 NGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQS-TYSKPNLVMYNILIDAMCKSGNLR 500
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
+ +L ++ K L + YT +I+GLC+ + A F+ M
Sbjct: 501 DA-RKLFSELFVKG-LQPNAQIYTTIINGLCKEGLLDEALEAFRNM 544
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 184/410 (44%), Gaps = 52/410 (12%)
Query: 87 LKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDIL 144
L D V +P Y +I+ + +A G+ + G + + Y ++D
Sbjct: 190 LFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEA-GCQPNVVTYSTIIDSH 248
Query: 145 GKVRQMDQMRALLEEMS-KG---HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLE 200
K R++++ + M KG I T N++ + + FS QW++A +E+ + +
Sbjct: 249 RKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFS---QWKEASALLNEMRSLNIM 305
Query: 201 KNTETMNLLLDTLCKEGKVELARSVFLEL------------------------------- 229
+ T N+L+DT+CKEGKV A+ V +
Sbjct: 306 PDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKL 365
Query: 230 ------KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYC 283
K C P+ ++NI I+G+CK+ R+DEA+ EM G P +SY+T+I C
Sbjct: 366 FDAMITKGC-KPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLC 424
Query: 284 RQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSR 343
+ + + L M G PN+ TY+ ++ K G F +A R+ M+ SKP+
Sbjct: 425 QLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLV 484
Query: 344 FFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEE 403
+N LI + ++ +++A ++ E+ G+ P+ + T+I G ++A
Sbjct: 485 MYNILIDAMCKSGNLRDARKLFS-ELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRN 543
Query: 404 MNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
M + + C P+ +++ +++ F K + QL+ +M +K ++ D+ T
Sbjct: 544 MEE-DGCPPDEISYNVIIRG-FLHHKDESRAVQLIGEMRDKGFIA-DVGT 590
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 100/435 (22%), Positives = 198/435 (45%), Gaps = 8/435 (1%)
Query: 74 VHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCP-GYEH 132
V +G D V KQ + + P+ Y ++ LI+ F + L A G +
Sbjct: 108 VKMGQYYDTVISLTKQMELA-GLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQP 166
Query: 133 SSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTF 191
+ + +++ L KV + Q L ++M ++G + T ++ G+ A
Sbjct: 167 TIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLL 226
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKI 250
++ G + N T + ++D+ K+ +V A +F +K I P+ T+N I G C
Sbjct: 227 KKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNF 286
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
++ EA + EM+ P +++++ ++ + C++ S+ +L M G P+VVTY
Sbjct: 287 SQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTY 346
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
+++M + + EA ++ + M G KPD +N LI + R+ EA ++ EM
Sbjct: 347 SSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFN-EMI 405
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKT 430
G+ P+ ++NT+I G +A ++ + M+ + PN+ T+ LL K G
Sbjct: 406 HQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNL-PNLFTYSILLDGFCKQGYF 464
Query: 431 DECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCR 490
+ +L M + + ++ Y ++I +C++ A LF E+ + P Q
Sbjct: 465 GKAF-RLFRAMQSTYS-KPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYT 522
Query: 491 LILDEVKQKHMYDAA 505
I++ + ++ + D A
Sbjct: 523 TIINGLCKEGLLDEA 537
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 125/270 (46%), Gaps = 7/270 (2%)
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCR--QYNFSKVYELLDEMQAQGCPP 305
C +D+A + M PC+I ++ ++ + + QY + V L +M+ G P
Sbjct: 73 CSFRNIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQY-YDTVISLTKQMELAGLSP 131
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N+ T + +++ + + A + K+ +G +P F LI L + + +A+ ++
Sbjct: 132 NIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELF 191
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
+M G PD T+ T+I G A +L++M + C+PNV T+ ++ S
Sbjct: 192 D-DMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEE-AGCQPNVVTYSTIIDSHR 249
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
K + +E L + + +S DI TY +I GLC ++ + A L EM +I P
Sbjct: 250 KDRRVNEALD--IFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPD 307
Query: 486 YQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
T +++D + ++ A+ + M ++
Sbjct: 308 IVTFNVLVDTICKEGKVSEAQGVLKTMTEM 337
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 177/353 (50%), Gaps = 8/353 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTI--AKVMRRFSGAGQWED 186
G E ++ +Y ++ +L Q+ +LE+M+ H V L+ + V+ F G
Sbjct: 317 GLESNATVYTSVIALLCNKGQVSDALRVLEDMTM-HGVALDAVVFTTVISGFCSKGDLAA 375
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIH 245
A R F+E+ GL + T L++ LC+ G+++ A V E+ + + T+ + I
Sbjct: 376 ARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLID 435
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G+CK + EA EM G P V++Y+ + C+Q + ELL EM +G
Sbjct: 436 GYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLEL 495
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
NV TY ++++ L K G+ E+A+RI +M+ G + D + LI TL ++ A +
Sbjct: 496 NVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNML 555
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
Q EM + G+ P +T+N ++ F G E +LE M + ++ +PNV T++ L+K +
Sbjct: 556 Q-EMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLE-KNVRPNVVTYNSLMKQ-Y 612
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
K + +++ M + ++ + TY ++I G C+A + A +EMI
Sbjct: 613 CIDKNMKSTTEIYKGM-HSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMI 664
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 141/298 (47%), Gaps = 12/298 (4%)
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFI 244
++A+ F EL +KN + N+LL L G+++ A F E+ S PP+ T+ +
Sbjct: 241 DEAIALFRELP----DKNVCSHNILLKALLSAGRLKDACQHFDEMSS--PPDVVTYGTMV 294
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
HG+C ++ A + EM G Y+++I C + S +L++M G
Sbjct: 295 HGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVA 354
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
+ V +TTV+S GD A R+ E+M+ G D LI L RA ++EA V
Sbjct: 355 LDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRV 414
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
Q EM + G+ D T+ +I + G+ +AF V EM PNV T+ L
Sbjct: 415 LQ-EMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVG-RRVAPNVVTYTALSDGL 472
Query: 425 FKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM--IGH 480
K G ++LL +M NK L L++ TY +I+GLC+ E A + EM GH
Sbjct: 473 CKQGDV-RAANELLHEMCNK-GLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGH 528
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 134/285 (47%), Gaps = 9/285 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKG---HIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y + D L K + LL EM +KG ++ T N++ + +F G E A+R
Sbjct: 465 YTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKF---GNLEQAMRIMT 521
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKIN 251
E+ G + T L+DTLCK G+ + A ++ E L I P+ T+N+ ++G+C
Sbjct: 522 EMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSG 581
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
RV+ + ++ M P V++Y+++++ YC N E+ M +Q PN TY
Sbjct: 582 RVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYN 641
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
++ K+ + +EA+ ++M G + + ++ LI L + + EA V+ +M
Sbjct: 642 ILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEA-RVFFDKMRN 700
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQT 416
G+ + ++ + + + + E + +E+ + H K T
Sbjct: 701 EGLTAEPDVYSFYMDISFNEDNLESTITLCDELVEASHVKSKAGT 745
>gi|255660908|gb|ACU25623.1| pentatricopeptide repeat-containing protein [Mulguraea
asparagoides]
Length = 481
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 191/389 (49%), Gaps = 14/389 (3%)
Query: 100 HYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEE 159
H LV ++H K + AL FRW +EH E + +++ILG+ +++ R +L +
Sbjct: 12 HELVYNVLHSAKTS-EHALQFFRWVERSNLFEHBRETHLKIIEILGRASKLNHARCILLD 70
Query: 160 M-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
M KG + ++ + G +++V+ F ++ G+E+ ++ + L + + G+
Sbjct: 71 MPKKGLEWDEDMWVMMIDSYGKQGIVQESVKLFQKMEELGVERTLKSYDALFKVILRRGR 130
Query: 219 VELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
+A+ F + L I P FN+ I G+ +V+ A ++MK P V++Y+T
Sbjct: 131 YMMAKRYFNKMLSEGIEPTRXXFNVLIWGFFLSGKVETANRFFEDMKSREISPDVVTYNT 190
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+I Y R + + EM+ + P VVTYTT++ ++A+R+ E+MK G
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLXEEMKGFG 250
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP-DTSTFNTMITMFSHHGHHEK 396
KP++ ++ L+ L A ++ EA + + EM + +AP D S F +IT GH +
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMSEARSILK-EMVDKYLAPTDNSIFMRLITSQCTSGHLDA 309
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK-------HHLSL 449
A VL+ M +L + L+++ K G+ D+ + +LLD ++ K L L
Sbjct: 310 ASDVLKAMIRLS-VPTEAGHYGVLIENFCKXGQYDQAV-KLLDKLIEKDIILRPQSTLHL 367
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMI 478
+ + Y +I LC + A L ++++
Sbjct: 368 EPSAYNPMIEYLCNNGQAAKAETLVRQLL 396
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 123/267 (46%), Gaps = 6/267 (2%)
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
+ ++++ A+ + +M G + +I SY +Q + +L +M+ G +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKQGIVQESVKLFQKMEELGVERTLK 116
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
+Y + + + G + A R KM G +P FN LI+ + +V+ A ++ +
Sbjct: 117 SYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRXXFNVLIWGFFLSGKVETANRFFE-D 175
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M ++PD T+NTMI + E+A EM K + +P V T+ L+K
Sbjct: 176 MKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEM-KGRNIEPTVVTYTTLIKGYVSVD 234
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ D+ L L + + + + TY+ ++ GLC A K A + KEM+ + P +
Sbjct: 235 QVDDALR--LXEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYLAPTDNS 292
Query: 489 C--RLILDEVKQKHMYDAAEKIEAVMK 513
RLI + H+ A++ ++A+++
Sbjct: 293 IFMRLITSQCTSGHLDAASDVLKAMIR 319
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 4/176 (2%)
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
T+ ++ L ++ A I M G + D + +I + G+ VQE+V ++Q +
Sbjct: 47 THLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKQGIVQESVKLFQ-K 105
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M E GV +++ + + G + A +M E +P F+ L+ F +G
Sbjct: 106 MEELGVERTLKSYDALFKVILRRGRYMMAKRYFNKMLS-EGIEPTRXXFNVLIWGFFLSG 164
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
K E ++ +DM ++ +S D+ TY +I+G R K E A F EM G +I P
Sbjct: 165 KV-ETANRFFEDMKSRE-ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEP 218
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 79/210 (37%), Gaps = 28/210 (13%)
Query: 131 EHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFS----------- 179
E S + EM+ L MR + + + GH+ + + K M R S
Sbjct: 273 EARSILKEMVDKYLAPTDNSIFMRLITSQCTSGHLDAASDVLKAMIRLSVPTEAGHYGVL 332
Query: 180 -----GAGQWEDAVRTFDEL----------GTFGLEKNTETMNLLLDTLCKEGKVELARS 224
GQ++ AV+ D+L T LE + N +++ LC G+ A +
Sbjct: 333 IENFCKXGQYDQAVKLLDKLIEKDIILRPQSTLHLEPSA--YNPMIEYLCNNGQAAKAET 390
Query: 225 VFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCR 284
+ +L + N I G + D A ++ M +Y++++QSY +
Sbjct: 391 LVRQLLKLGVQDPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLK 450
Query: 285 QYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
+ + LD M P+ + +VM
Sbjct: 451 RNEPADAKAALDSMIENDHLPDSALFRSVM 480
>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Cucumis sativus]
Length = 645
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/454 (25%), Positives = 207/454 (45%), Gaps = 48/454 (10%)
Query: 99 SHYLVNKLIHRFKDDWK---SALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRA 155
+ YL+N L+ K + F + + +Y ++ +L K+ +++ +
Sbjct: 77 ARYLLNDLVQNLVKSHKPYHACQLAFSELSRLKSSKFTPNVYGELIIVLCKMELVEEALS 136
Query: 156 LLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK 215
+ ++ G +T+ ++ G++E R ++E+ + GL + T L+D C+
Sbjct: 137 MYHKV--GAALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCR 194
Query: 216 EGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVIS 274
+G + A+ +F E++ I P + I I G C N+++EA+ + M+ G +P V +
Sbjct: 195 QGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYT 254
Query: 275 YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
Y+T++ YC+ N + L +M +G P+VVT+ ++ L K G+ + A + M
Sbjct: 255 YNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMI 314
Query: 335 IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHH 394
P+ +N LI + V EA+ ++ +E+ V+PD T++ +I
Sbjct: 315 KFSVTPNIAVYNSLIDAYCKVGDVSEAMALF-LELERFEVSPDVFTYSILIRGLCSVSRT 373
Query: 395 EKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL------------------SQ 436
E+A ++ E+M K E N T++ L+ C K GK D+ L S
Sbjct: 374 EEAGNIFEKMTK-EGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFST 432
Query: 437 LLD----------------DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH 480
L+D +MV K LS D+ TYT +I G C+ + A L+ +M+ +
Sbjct: 433 LIDGYCKIRNLQAAMGIYSEMVIK-SLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDN 491
Query: 481 DITPRYQTCRLILDEV-KQKHMYDA----AEKIE 509
ITP T +LD + K + DA EKIE
Sbjct: 492 GITPNCYTISCLLDGLCKDGKISDALELFTEKIE 525
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 110/437 (25%), Positives = 196/437 (44%), Gaps = 32/437 (7%)
Query: 70 IISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIF---RWA 124
++ V V + E+ + ++ + N + PS LI + D A +F R
Sbjct: 152 VLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVK 211
Query: 125 GSCPGYEHSSEIYEMMVDIL---GKVRQMDQM-RALLEEMSKGHIVTLNTIAKVMRRFSG 180
G P + +Y +++ L K+ + + M RA+ E ++ T NT+ + +
Sbjct: 212 GIVP----TVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLAN 267
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHT 239
A Q A+R + ++ GL + T +L+D LCK G+++ AR++F+ + K + PN
Sbjct: 268 AKQ---ALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAV 324
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+N I +CK+ V EA E++ P V +YS +I+ C + + ++M
Sbjct: 325 YNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMT 384
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
+G N VTY +++ K G ++A+ I +M G +P+ F+ LI + +Q
Sbjct: 385 KEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQ 444
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
A+ +Y EM ++PD T+ MI +G ++A + +M PN T
Sbjct: 445 AAMGIYS-EMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLD-NGITPNCYTISC 502
Query: 420 LLKSCFKTGKTDECLSQL------------LDDMVNKHHLSLDITTYTLVIHGLCRANKC 467
LL K GK + L +D +K L+ + YT +IHGLC+ +
Sbjct: 503 LLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLT-NHVAYTALIHGLCQDGQF 561
Query: 468 EWAYLLFKEMIGHDITP 484
A LF +M + + P
Sbjct: 562 SKAVKLFSDMRRYGLQP 578
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 130/312 (41%), Gaps = 53/312 (16%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEMSKGHIVT-LNTIAKVMRRFSGAGQWEDAVRTFDEL 194
+Y ++D KV + + AL E+ + + + T + ++R + E+A F+++
Sbjct: 324 VYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKM 383
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRV 253
G+ N+ T N L+D CKEGK++ A + ++ ++ + PN TF+ I G+CKI +
Sbjct: 384 TKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNL 443
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV------ 307
A EM P V++Y+ +I +C+ + + +L +M G PN
Sbjct: 444 QAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCL 503
Query: 308 ------------------------------------------VTYTTVMSYLAKSGDFEE 325
V YT ++ L + G F +
Sbjct: 504 LDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSK 563
Query: 326 AIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMI 385
A+++ M+ G +PD + ++ L +V+ + + +M + GV P+++ +
Sbjct: 564 AVKLFSDMRRYGLQPDEVIYVVMLRGL---FQVKYILMMLHADMLKFGVIPNSAVHVILC 620
Query: 386 TMFSHHGHHEKA 397
+ G + A
Sbjct: 621 ECYQESGFLKSA 632
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 79/190 (41%), Gaps = 22/190 (11%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDA 187
G E + + ++D K+R + + EM K + T ++ G ++A
Sbjct: 422 GVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEA 481
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGW 247
++ + ++ G+ N T++ LLD LCK+GK+ A +F E P +
Sbjct: 482 LKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNV-------- 533
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
+A + + H ++Y+ +I C+ FSK +L +M+ G P+
Sbjct: 534 -------DAGGSKPSLTNH------VAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDE 580
Query: 308 VTYTTVMSYL 317
V Y ++ L
Sbjct: 581 VIYVVMLRGL 590
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 178/369 (48%), Gaps = 7/369 (1%)
Query: 139 MMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTF 197
M++D L K + D M + +M ++G + T ++ G + A R FDE+
Sbjct: 163 MVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEK 222
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEA 256
+ +L+ LC E ++ A S+F ++ S + PN +T+N + G+CKI V +A
Sbjct: 223 KIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKA 282
Query: 257 QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSY 316
QEM G G P V+++ +I C+ + L +M + G PN+ Y ++
Sbjct: 283 LELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDG 342
Query: 317 LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
K+G+ EA+ + +++ PD ++ LI L R++EA + Q EM + G P
Sbjct: 343 YCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQ-EMKKKGFLP 401
Query: 377 DTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQ 436
+ T+NT+I + G+ EKA V +M + + +PN+ TF L+ K GK + +
Sbjct: 402 NAVTYNTLIDGYCKEGNMEKAIEVCSQMTE-KGIEPNIITFSTLIDGYCKAGKMEAAMG- 459
Query: 437 LLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV 496
L +MV K L D+ YT +I G + + A+ L KEM + P T ++D +
Sbjct: 460 LYTEMVIKGLLP-DVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGL 518
Query: 497 -KQKHMYDA 504
K + DA
Sbjct: 519 CKDGRISDA 527
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 146/305 (47%), Gaps = 4/305 (1%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
IY +++ L ++ + ++ M + G + L T +M + + A+ + E+
Sbjct: 230 IYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEM 289
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRV 253
GL N T +L+D LCK ++ AR +++ S + PN +N I G+CK +
Sbjct: 290 LGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNL 349
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
EA E++ H P V +YS +I+ C + LL EM+ +G PN VTY T+
Sbjct: 350 SEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTL 409
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
+ K G+ E+AI + +M G +P+ F+ LI +A +++ A+ +Y EM G
Sbjct: 410 IDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLY-TEMVIKG 468
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
+ PD + +I G+ ++AF + +EM + PNV T L+ K G+ +
Sbjct: 469 LLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQE-AGLHPNVFTLSCLIDGLCKDGRISDA 527
Query: 434 LSQLL 438
+ L
Sbjct: 528 IKLFL 532
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 136/301 (45%), Gaps = 7/301 (2%)
Query: 207 NLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
+L+ + G VE A V+ ++ + P N+ + G K R D +M
Sbjct: 130 GVLIIAFSEMGLVEEALWVYYKMD--VLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVAR 187
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
G P V++Y T+I CRQ +F K + L DEM + P VV YT ++ L EA
Sbjct: 188 GASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEA 247
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
+ M+ G P+ +N ++ + + V++A+ +YQ EM +G+ P+ TF +I
Sbjct: 248 ESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQ-EMLGDGLLPNVVTFGILID 306
Query: 387 MFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHH 446
A L +M PN+ ++ L+ K G E LS L + KH
Sbjct: 307 GLCKTDEMVSARKFLIDMASF-GVVPNIFVYNCLIDGYCKAGNLSEALS--LHSEIEKHE 363
Query: 447 LSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE-VKQKHMYDAA 505
+ D+ TY+++I GLC ++ E A L +EM P T ++D K+ +M A
Sbjct: 364 ILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAI 423
Query: 506 E 506
E
Sbjct: 424 E 424
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 72/174 (41%), Gaps = 8/174 (4%)
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
++ SK F LI V+EA++VY + V P N ++ G
Sbjct: 118 RLESSKFTPNVFGVLIIAFSEMGLVEEALWVYY----KMDVLPAMQACNMVLDGLVKKGR 173
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
+ + V +M PNV T+ L+ C + G + +L D+M+ K +
Sbjct: 174 FDTMWKVYGDMVA-RGASPNVVTYGTLIDGCCRQGDFLKAF-RLFDEMIEKKIFP-TVVI 230
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE-VKQKHMYDAAE 506
YT++I GLC ++ A +F+ M + P T ++D K H+ A E
Sbjct: 231 YTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALE 284
Score = 42.4 bits (98), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 84/232 (36%), Gaps = 47/232 (20%)
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
+IS++++I +Y +K +L +MQ P++VT T +S A G +
Sbjct: 697 LISWTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSACADLGALD------- 749
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHH 391
+ E ++ Y + G+ D N++I M+S
Sbjct: 750 --------------------------MGEWIHAY---IRHRGLDTDLCLNNSLINMYSKC 780
Query: 392 GHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDI 451
G A + PN TF +L +C G +E Q M + L I
Sbjct: 781 GEIGTA-------RRFSLVLPNDVTFMGVLMACSHAGLVEEG-KQHFRSMKEDYSLRPRI 832
Query: 452 TTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYD 503
+ + ++ LCRA AY +M + P R +L + M+D
Sbjct: 833 SHFGCMVDLLCRAGLLTEAYEFILKM---PVRPNAVVWRTLLGACSLQGMWD 881
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 82/201 (40%), Gaps = 22/201 (10%)
Query: 41 IESYCSDG---------ARLDHHQVLCVDSPRLPDIDV--IISKVHVGSSEDEVFQSLKQ 89
I+ YC G + ++ H++L PD+ I+ K G E L Q
Sbjct: 340 IDGYCKAGNLSEALSLHSEIEKHEIL-------PDVFTYSILIKGLCGVDRMEEADGLLQ 392
Query: 90 DHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKV 147
+ P+ N LI + + + + A+ + G E + + ++D K
Sbjct: 393 EMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTE-KGIEPNIITFSTLIDGYCKA 451
Query: 148 RQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETM 206
+M+ L EM KG + + ++ G ++A R E+ GL N T+
Sbjct: 452 GKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTL 511
Query: 207 NLLLDTLCKEGKVELARSVFL 227
+ L+D LCK+G++ A +FL
Sbjct: 512 SCLIDGLCKDGRISDAIKLFL 532
>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
Length = 691
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/449 (24%), Positives = 204/449 (45%), Gaps = 52/449 (11%)
Query: 77 GSSEDEVFQSLKQDHVCNAIQPSHYLVNKLI--HRFKDDWKSALGIFRWAGSCPGYEHSS 134
G EVF + + A+ P+H N +I H D ++ + R C G + ++
Sbjct: 216 GGDAVEVFDEMTE----RAVLPNHITYNTMIDGHIKGGDLEAGFRL-RDQMVCHGLKPNA 270
Query: 135 EIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
Y +++ L + +M + ALL+EM+ +V ++ F G + D+
Sbjct: 271 ITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSIL--FDGLSRNGDSKAMLSLF 328
Query: 195 GTF---GLEKNTETMNLLLDTLCKEGKVELAR---------------------------- 223
G + G+ T ++LL+ LCK+GKV +A
Sbjct: 329 GKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQT 388
Query: 224 -------SVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISY 275
S F ++KS I P+ T+N I+G CK R+ AQ + EM+ +G +P V ++
Sbjct: 389 GELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETF 448
Query: 276 STIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKI 335
+T+I +Y R K + +L EMQ G PNVV+Y ++++ K+G EA+ I + M
Sbjct: 449 NTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFH 508
Query: 336 VGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHE 395
P+++ +N +I +A ++ +M NG++P T+N +I +
Sbjct: 509 KDVLPNAQVYNAIIDAYVEHGPNDQA-FILVEKMKSNGISPSIVTYNLLIKGLCNQSQIS 567
Query: 396 KAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYT 455
+A ++ ++ P+ +++ L+ +C G D+ L L ++K+ + + TY
Sbjct: 568 EAEEIINSLSN-HRLIPDAVSYNTLISACCYRGNIDKALD--LQQRMHKYGIKSTVRTYH 624
Query: 456 LVIHGLCRANKCEWAYLLFKEMIGHDITP 484
+I GL A + L+++M+ +++ P
Sbjct: 625 QLISGLGGAGRLNEMEYLYQKMMQNNVVP 653
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 160/335 (47%), Gaps = 18/335 (5%)
Query: 78 SSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEI- 136
S +EV QSL V + P+ + N LI+ + G A S G S I
Sbjct: 357 SIAEEVLQSL----VNAGLVPTRVIYNTLINGY-----CQTGELEGAFSTFGQMKSRHIK 407
Query: 137 -----YEMMVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDAVRT 190
Y +++ L K ++ + LL EM + T+ T ++ + GQ E
Sbjct: 408 PDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIV 467
Query: 191 FDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCK 249
E+ GL+ N + +++ CK GK+ A ++ ++ + PNA +N I + +
Sbjct: 468 LSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVE 527
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
D+A +++MK +G P +++Y+ +I+ C Q S+ E+++ + P+ V+
Sbjct: 528 HGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVS 587
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM 369
Y T++S G+ ++A+ + ++M G K R ++ LI LG A R+ E Y+YQ +M
Sbjct: 588 YNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQ-KM 646
Query: 370 PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
+N V P + N M+ +S +G+ KA + +EM
Sbjct: 647 MQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEM 681
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 111/448 (24%), Positives = 180/448 (40%), Gaps = 87/448 (19%)
Query: 113 DWKSALGIFRWAGSCPGYEHSSEIYEMMV------DILGKVRQMDQMRALLEEMSKGHIV 166
D + A GI AG+ P ++ + V + +G +R+M + + +
Sbjct: 147 DVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGR-----DGAPPPNAF 201
Query: 167 TLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF 226
+ N + M R AG+ DAV FDE+ + N T N ++D K G +E +
Sbjct: 202 SYNVVIAGMWR---AGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLR 258
Query: 227 LELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTI------- 278
++ + PNA T+N+ + G C+ R+ E + EM P +YS +
Sbjct: 259 DQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRN 318
Query: 279 ----------------------------IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
+ C+ S E+L + G P V Y
Sbjct: 319 GDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIY 378
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
T+++ ++G+ E A +MK KPD +N LI L +A R+ A + +EM
Sbjct: 379 NTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLL-MEMQ 437
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKT 430
+NGV P TFNT+I + G EK F VL EM + KPNV ++ ++ + K GK
Sbjct: 438 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQE-NGLKPNVVSYGSIVNAFCKNGKI 496
Query: 431 DECLSQLLDDMVNK----------------------------------HHLSLDITTYTL 456
E ++ +LDDM +K + +S I TY L
Sbjct: 497 PEAVA-ILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNL 555
Query: 457 VIHGLCRANKCEWAYLLFKEMIGHDITP 484
+I GLC ++ A + + H + P
Sbjct: 556 LIKGLCNQSQISEAEEIINSLSNHRLIP 583
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 131/315 (41%), Gaps = 6/315 (1%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHT 239
G+ D R F L + G +T N + G + A + + PPNA +
Sbjct: 143 GRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFS 202
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+N+ I G + R +A EM P I+Y+T+I + + + + L D+M
Sbjct: 203 YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMV 262
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
G PN +TY ++S L ++G E + ++M PD ++ L L R +
Sbjct: 263 CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSK 322
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
+ ++ + +NGV T + ++ G A VL+ + P ++
Sbjct: 323 AMLSLFGKYL-KNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVN-AGLVPTRVIYNT 380
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
L+ +TG+ + S + H+ D TY +I+GLC+A + A L EM
Sbjct: 381 LINGYCQTGELEGAFSTF--GQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQD 438
Query: 480 HDITPRYQTCRLILD 494
+ + P +T ++D
Sbjct: 439 NGVNPTVETFNTLID 453
>gi|124360736|gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]
Length = 479
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 189/398 (47%), Gaps = 15/398 (3%)
Query: 97 QPSHYLVNKLIHRFKDDWKSALGIFRWAGS--CPGYEHSSEIYEMMVDILGKVRQMDQMR 154
Q ++ LV +LI KD K+ L +F A G+ H + M+ L V Q
Sbjct: 12 QITNSLVEQLIKAEKDINKT-LVMFDSATEEYSNGFRHDHNTFGAMIHRLVSVNQFRPAE 70
Query: 155 ALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTL 213
+LE M + VT + + R + + DA+R F ++ F ++ ++ + D L
Sbjct: 71 GMLERMKQEDCEVTEDVFLTICRGYGRVHRPLDAIRVFHKMEDFQVKPTQKSYLTVFDIL 130
Query: 214 CKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTI-QEMKGHGCHPC 271
+E V+ A + E++ IPP + NI I CK E+ + + +EM GC P
Sbjct: 131 VEENHVKRAIGFYKEMREKGIPPTVVSLNILIKALCKNEETVESAFRLFREMPNRGCQPD 190
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
+Y T+I C+ S+ ELLDEM+ +G P+VV+YT+++ L +S + +EAI + E
Sbjct: 191 SYTYGTLINGLCKLGKISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLE 250
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHH 391
+M I G +P+ ++ L+ L ++ +A+ + +V M + P+ T++T+I
Sbjct: 251 EMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELLEV-MVRRRLLPNMVTYSTLINGLCKE 309
Query: 392 GHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMV------NKH 445
G H +A +L+ M +L+ KP+ + ++ E + +D+M N+
Sbjct: 310 GKHREAVEILDRM-RLQGLKPDAGMYGRIISGLCAACNYQEA-ANFIDEMALGGISPNRA 367
Query: 446 HLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
+ + + +V+ GLC A+ L+ M I+
Sbjct: 368 SWTFHVKMHNMVVQGLCNNVDPTRAFQLYLSMRTRGIS 405
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 162/318 (50%), Gaps = 17/318 (5%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y + DIL + + + +EM + I V+LN + K + + E A R F
Sbjct: 123 YLTVFDILVEENHVKRAIGFYKEMREKGIPPTVVSLNILIKALCK--NEETVESAFRLFR 180
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKIN 251
E+ G + ++ T L++ LCK GK+ A+ + E++ + P+ ++ IHG C+ N
Sbjct: 181 EMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSN 240
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
+DEA ++EM +G P V +YS+++ C+ + S+ ELL+ M + PN+VTY+
Sbjct: 241 NLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYS 300
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
T+++ L K G EA+ I ++M++ G KPD+ + +I L A QEA EM
Sbjct: 301 TLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCAACNYQEAANFID-EMAL 359
Query: 372 NGVAPDTSTF-------NTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
G++P+ +++ N ++ ++ +AF + M + + TF L+K
Sbjct: 360 GGISPNRASWTFHVKMHNMVVQGLCNNVDPTRAFQLYLSM-RTRGISVEIGTFDCLVKCF 418
Query: 425 FKTGKTDECLSQLLDDMV 442
K G ++ +++L++M+
Sbjct: 419 CKRGDLNKA-ARILEEMI 435
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/375 (21%), Positives = 152/375 (40%), Gaps = 51/375 (13%)
Query: 50 RLDHHQVLCVDSPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHR 109
+++ QV L D+++ + HV + ++ +++ I P+ +N LI
Sbjct: 110 KMEDFQVKPTQKSYLTVFDILVEENHVKRAIG-FYKEMRE----KGIPPTVVSLNILIKA 164
Query: 110 FKDDWKSALGIFRWAGSCP--GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIV 166
+ ++ FR P G + S Y +++ L K+ ++ Q + LL+EM KG
Sbjct: 165 LCKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSP 224
Query: 167 TLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF 226
++ + ++ + ++A+ +E+ G+E N T + L+D LCK G A +
Sbjct: 225 SVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELL 284
Query: 227 -LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQ 285
+ ++ + PN T++ I+G CK + EA + M+ G P Y II C
Sbjct: 285 EVMVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCAA 344
Query: 286 YNFSKVYELLDEMQAQGCPPN--------------------------------------- 306
N+ + +DEM G PN
Sbjct: 345 CNYQEAANFIDEMALGGISPNRASWTFHVKMHNMVVQGLCNNVDPTRAFQLYLSMRTRGI 404
Query: 307 ---VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
+ T+ ++ K GD +A RI E+M + G PD +N L+ L +V+E
Sbjct: 405 SVEIGTFDCLVKCFCKRGDLNKAARILEEMILDGCIPDEGMWNVLMCGLWDRKKVRETTE 464
Query: 364 VYQVEMPENGVAPDT 378
+ E+ + V ++
Sbjct: 465 LLVAELKQKFVEAES 479
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 113/251 (45%), Gaps = 3/251 (1%)
Query: 238 HTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDE 297
+TF IH +N+ A+ ++ MK C + TI + Y R + + +
Sbjct: 51 NTFGAMIHRLVSVNQFRPAEGMLERMKQEDCEVTEDVFLTICRGYGRVHRPLDAIRVFHK 110
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
M+ P +Y TV L + + AI ++M+ G P N LI L +
Sbjct: 111 MEDFQVKPTQKSYLTVFDILVEENHVKRAIGFYKEMREKGIPPTVVSLNILIKALCKNEE 170
Query: 358 VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTF 417
E+ + EMP G PD+ T+ T+I G +A +L+EM + + P+V ++
Sbjct: 171 TVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEE-KGLSPSVVSY 229
Query: 418 HPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
L+ ++ DE + +LL++M+ + + ++ TY+ ++ GLC++ A L + M
Sbjct: 230 TSLIHGLCQSNNLDEAI-ELLEEMI-INGIEPNVFTYSSLMDGLCKSGHSSQAMELLEVM 287
Query: 478 IGHDITPRYQT 488
+ + P T
Sbjct: 288 VRRRLLPNMVT 298
>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Vitis vinifera]
Length = 708
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 152/305 (49%), Gaps = 6/305 (1%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHT 239
G + A +E+ G + N T L+D LCK+G E A +FL+L PN HT
Sbjct: 308 GSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHT 367
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+ I+G+CK ++++ A+ + M+ G P +Y+T+I +C+ NF + YEL+D M
Sbjct: 368 YTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMG 427
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
+G PN+ TY ++ L K G +EA R+ K+ + G + D + L+ R +
Sbjct: 428 KEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTN 487
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
++ + +M + G PD ++ T+I+ F +++ + EE L P +T+
Sbjct: 488 RSLVFFN-KMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSL-GLIPTKKTYTS 545
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
++ + G T L+ L ++ H + D TY +I GLC+ +K + A L+ M+
Sbjct: 546 MICGYCRYGNTS--LAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMD 603
Query: 480 HDITP 484
++P
Sbjct: 604 KGLSP 608
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 101/430 (23%), Positives = 187/430 (43%), Gaps = 54/430 (12%)
Query: 117 ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMR 176
AL WA P + H +Y + L + +++ +++ M +
Sbjct: 117 ALSFLYWAIGFPKFRHFMRLYIVSATALIGNKNLERANEVMQCM--------------VM 162
Query: 177 RFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPP 235
F+ G+ ++AV E+ GL +T+T+N +LD G VE+A ++F+E+ + + P
Sbjct: 163 NFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSP 222
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
+ +F + + C + RV EA+ + M G + + II ++C++ ++V
Sbjct: 223 DCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYF 282
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
+M G PNV+ +T +++ L K G ++A + E+M G KP+ LI L +
Sbjct: 283 WKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKK 342
Query: 356 SRVQEA----------------VYVYQV-------------------EMPENGVAPDTST 380
++A V+ Y M E G+ P+T+T
Sbjct: 343 GWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNT 402
Query: 381 FNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDD 440
+ T+I G+ +A+ +++ M K E PN+ T++ ++ K G DE L +
Sbjct: 403 YTTLIDGHCKVGNFVRAYELMDLMGK-EGFSPNIYTYNAIIDGLCKKGSLDEAYRLL--N 459
Query: 441 MVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT-CRLILDEVKQK 499
V+ H L D TYT+++ CR + + F +M+ TP + LI +QK
Sbjct: 460 KVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQK 519
Query: 500 HMYDAAEKIE 509
M ++ E
Sbjct: 520 QMKESERLFE 529
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 91/211 (43%), Gaps = 8/211 (3%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQW 184
G+ + Y ++D L K +D+ LL ++S + VT + V R + +
Sbjct: 430 GFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNR- 488
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIF 243
++ F+++ G + + L+ T C++ +++ + +F E S + P T+
Sbjct: 489 --SLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSM 546
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
I G+C+ A Q M HGC P I+Y +I C++ L D M +G
Sbjct: 547 ICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGL 606
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
P VT T+ K D AI + ++++
Sbjct: 607 SPCEVTRLTLAYEYCKKDDSSTAINVLDRLE 637
>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
Length = 637
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 173/370 (46%), Gaps = 6/370 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G + + Y +VD K R++ A+L M S G + T +++ F G+ DA
Sbjct: 252 GLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDA 311
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHG 246
+ + + G +T + N+L+ LC G ++ A F +K + + PNA T++ + G
Sbjct: 312 LSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDG 371
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
+ +D A EMK GC P V+ Y+ +I C++ F + L+D+M CPPN
Sbjct: 372 FSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPN 431
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
VT+ T++ L G A+ + M+ G P+ R +N L++ L R ++A +
Sbjct: 432 TVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDA-FAMV 490
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
+EM NG T+NT+I + A +L M ++ +P+ TF+ ++ + K
Sbjct: 491 IEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRM-MVQGIQPDAFTFNAIIHAYCK 549
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
GK ++ L +N + ++ YT++I LC K A + +M+ I P
Sbjct: 550 EGKVS--IAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNE 607
Query: 487 QTCRLILDEV 496
T +++ +
Sbjct: 608 ATWNVLVRAI 617
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 167/389 (42%), Gaps = 38/389 (9%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK--------GHIVTLNTIAKVMRRFSG 180
G + + Y +++ L + ++D R +L+EMS+ H ++ + K+ R
Sbjct: 152 GVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEA 211
Query: 181 AG------------------------QWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKE 216
G WE +E+ GL+ N T ++D CK
Sbjct: 212 RGFLAETVPVQASYNAVVHALCGEFRMWE-VFSVVNEMVQRGLQPNVVTYTTIVDAFCKA 270
Query: 217 GKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISY 275
++ +A ++ + S PN TF + G+ + +V +A M G P ISY
Sbjct: 271 RELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISY 330
Query: 276 STIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKI 335
+ +I+ C + + + M+ PN TY+T++ + +GD + A+ I +MK
Sbjct: 331 NVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKS 390
Query: 336 VGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHE 395
G KP+ + +I L + +A + + +N P+T TFNT+I G
Sbjct: 391 SGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDN-CPPNTVTFNTLIGRLCDCGRVG 449
Query: 396 KAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYT 455
+A +V M + C PN +T++ LL F+ G + + +++ + N LSL TY
Sbjct: 450 RALNVFHGMRR-NGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSL--VTYN 506
Query: 456 LVIHGLCRANKCEWAYLLFKEMIGHDITP 484
VI+ LC+ + A LL M+ I P
Sbjct: 507 TVINCLCQMCMRKHAMLLLGRMMVQGIQP 535
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/430 (23%), Positives = 179/430 (41%), Gaps = 74/430 (17%)
Query: 128 PGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWED 186
PG S+ +E V L +D ++ L+EM +G T + + + F+ AG +
Sbjct: 45 PGSGDSARHHEATVRRLAAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADR 104
Query: 187 AVRTF------------------------------------DELGTFGLEKNTETMNLLL 210
A++TF D + G++ N T NLL+
Sbjct: 105 ALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLI 164
Query: 211 DTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVDEAQ----------- 257
LC+ +V+ AR + E+ K C P+ + + G CK+ RV+EA+
Sbjct: 165 RALCQNDRVDAARKMLDEMSRKGC-HPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQA 223
Query: 258 ---------------W----TIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
W + EM G P V++Y+TI+ ++C+ +L M
Sbjct: 224 SYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARM 283
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRV 358
+ GC PNV+T+T ++ + G +A+ + M G P + +N LI L +
Sbjct: 284 VSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDL 343
Query: 359 QEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFH 418
+ A+ + M N + P+ +T++T++ FS+ G + A + EM K CKPNV +
Sbjct: 344 KGALDFFN-SMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEM-KSSGCKPNVVVYT 401
Query: 419 PLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
++ K D+ S L+D M+ + + T+ +I LC + A +F M
Sbjct: 402 NMIDVLCKKMMFDQAES-LIDKML-MDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMR 459
Query: 479 GHDITPRYQT 488
+ P +T
Sbjct: 460 RNGCHPNDRT 469
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 143/341 (41%), Gaps = 11/341 (3%)
Query: 175 MRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK--SC 232
+RR + AG + E+ G+ + + + + G + A F C
Sbjct: 58 VRRLAAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGC 117
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
P +N + + N V M+ G P V +Y+ +I++ C+
Sbjct: 118 RDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAAR 177
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
++LDEM +GC P+ V++ T++S + K G EEA + + + P +N +++ L
Sbjct: 178 KMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEA-----RGFLAETVPVQASYNAVVHAL 232
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
R+ E V EM + G+ P+ T+ T++ F A +L M + C P
Sbjct: 233 CGEFRMWEVFSVVN-EMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSM-GCTP 290
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
NV TF L+K F+ GK + LS + MV++ I +Y ++I GLC + A
Sbjct: 291 NVLTFTALVKGFFEDGKVHDALS-MWHWMVDEGWAPSTI-SYNVLIRGLCCIGDLKGALD 348
Query: 473 LFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
F M + + P T ++D D A I MK
Sbjct: 349 FFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMK 389
>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
Length = 796
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 118/426 (27%), Positives = 187/426 (43%), Gaps = 40/426 (9%)
Query: 126 SCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVT--LNTIAKVMRRFSGAGQ 183
S G S + ++V+ LG Q+D R + EM G V ++T +++ AG+
Sbjct: 167 SARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTYTAMIKALCRAGE 226
Query: 184 WEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELA-RSVFLELKSCIPPNAHTFNI 242
+ A EL G++ T N+L+D LCK G+VE A R ++ + P+ TF I
Sbjct: 227 IDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTFGI 286
Query: 243 FIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
I G + + E +QEM+G G P + Y+ +I +CR+ + S+ +L DEM ++G
Sbjct: 287 LISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKG 346
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
VVTY + L K G+ E A +I ++M + G FN ++ R + + V
Sbjct: 347 IKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLV 406
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKA----FHVLEE--------MNKLEH- 409
EM + P+ + I G HE+A F VL + N L H
Sbjct: 407 LRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHG 466
Query: 410 -CKPNVQ--------------------TFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
C+ N T++ +++ C K K DE + QL DDM+ K
Sbjct: 467 LCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAI-QLRDDMI-KRGFK 524
Query: 449 LDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE-VKQKHMYDAAEK 507
D+ T+ + +H C K E L +M + P T I+D K K M+ A E
Sbjct: 525 PDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEY 584
Query: 508 IEAVMK 513
+ +MK
Sbjct: 585 LTELMK 590
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 115/446 (25%), Positives = 195/446 (43%), Gaps = 15/446 (3%)
Query: 50 RLDHHQVLCVDSPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLI-- 107
RL V P + ++IS + G EV L Q+ I P+ + N++I
Sbjct: 267 RLKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVL-QEMQGFGITPNEVIYNEMIGW 325
Query: 108 HRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKG---- 163
H K AL +F S G + + Y ++ L K +M+ +L+EM
Sbjct: 326 HCRKGHCSEALKLFDEMVS-KGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMV 384
Query: 164 HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELAR 223
H N++ V G G+ + +R E+ L+ N M + LCK GK E A
Sbjct: 385 HCSLFNSV--VAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAA 442
Query: 224 SVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSY 282
++ + L + N T N IHG C+ N + EA ++ M G I+Y+ +IQ
Sbjct: 443 EIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGC 502
Query: 283 CRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDS 342
C+ + +L D+M +G P++ T+ + G EE + + ++MK G KPD
Sbjct: 503 CKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDI 562
Query: 343 RFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLE 402
+ +I +A + +A Y E+ +NG+ P+ +N +I + +G+ A +L+
Sbjct: 563 VTYGTIIDGYCKAKDMHKA-NEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILD 621
Query: 403 EMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC 462
M K +P T++ L+ G +E + +V + L + YT++I G C
Sbjct: 622 TM-KYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVK--DIELGVIGYTIIIQGFC 678
Query: 463 RANKCEWAYLLFKEMIGHDITPRYQT 488
+ K + A + FKEM I P T
Sbjct: 679 KIGKIDEAVMYFKEMHSRGIPPNKMT 704
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 150/313 (47%), Gaps = 11/313 (3%)
Query: 160 MSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV 219
+ KG V + T ++ ++A + + G+E + T N+++ CK K+
Sbjct: 449 LGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKM 508
Query: 220 ELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTI 278
+ A + ++ K P+ TFNIF+H +C + +V+E + +MK G P +++Y TI
Sbjct: 509 DEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTI 568
Query: 279 IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
I YC+ + K E L E+ G PN V Y ++ ++G+ +AI I + MK G
Sbjct: 569 IDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGI 628
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQ---VEMPENGVAPDTSTFNTMITMFSHHGHHE 395
+P +N L+Y + A V+E V+ V+ E GV + +I F G +
Sbjct: 629 QPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVI----GYTIIIQGFCKIGKID 684
Query: 396 KAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYT 455
+A +EM+ PN T+ L+ + K+G +E S+L D+MV+ + D +Y
Sbjct: 685 EAVMYFKEMHS-RGIPPNKMTYTTLMFAYSKSGNKEEA-SKLFDEMVSLGIVP-DSVSYN 741
Query: 456 LVIHGLCRANKCE 468
+I G C + +
Sbjct: 742 TLISGFCEVDSLD 754
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 138/306 (45%), Gaps = 6/306 (1%)
Query: 104 NKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS 161
N LIH ++ K A + + A G E Y +M+ K +MD+ L ++M
Sbjct: 461 NALIHGLCQGNNMKEATKVLK-AMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMI 519
Query: 162 K-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVE 220
K G L T + + G+ E+ + D++ + GL+ + T ++D CK +
Sbjct: 520 KRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMH 579
Query: 221 LARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
A EL K+ + PNA +N I G+ + + +A + MK +G P ++Y++++
Sbjct: 580 KANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLM 639
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
C +V + + + V+ YT ++ K G +EA+ ++M G
Sbjct: 640 YWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIP 699
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
P+ + L++ ++ +EA ++ EM G+ PD+ ++NT+I+ F +K
Sbjct: 700 PNKMTYTTLMFAYSKSGNKEEASKLFD-EMVSLGIVPDSVSYNTLISGFCEVDSLDKMVE 758
Query: 400 VLEEMN 405
EM+
Sbjct: 759 SPAEMS 764
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 126/289 (43%), Gaps = 12/289 (4%)
Query: 68 DVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWK--SALGIFRWAG 125
+++I S DE Q L+ D + +P + N +H + + K L +
Sbjct: 496 NIMIQGCCKASKMDEAIQ-LRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMK 554
Query: 126 SCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTI-AKVMRRFSGAGQW 184
S G + Y ++D K + M + L E+ K + I ++ + G
Sbjct: 555 S-EGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNI 613
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAH----TF 240
DA+ D + G++ T N L+ +C G VE ++VF + CI + +
Sbjct: 614 SDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQ---CIVKDIELGVIGY 670
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
I I G+CKI ++DEA +EM G P ++Y+T++ +Y + N + +L DEM +
Sbjct: 671 TIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVS 730
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
G P+ V+Y T++S + ++ + +M K D +N +
Sbjct: 731 LGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQDGCSYNAFV 779
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 100/223 (44%), Gaps = 5/223 (2%)
Query: 287 NFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS-KPDSRFF 345
+ S+ + E+ A+G P++ T + ++ L G + A ++ +M+ + PD +
Sbjct: 155 SLSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTY 214
Query: 346 NCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMN 405
+I L RA + +A + E+ +G+ P T+N ++ G E+AF + M
Sbjct: 215 TAMIKALCRAGEI-DAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMV 273
Query: 406 KLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRAN 465
+ +P++ TF L+ + + E + +L +M ++ + Y +I CR
Sbjct: 274 E-GRVRPSIVTFGILISGLARGQQFGE-VGAVLQEM-QGFGITPNEVIYNEMIGWHCRKG 330
Query: 466 KCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
C A LF EM+ I T LI + ++ + AEKI
Sbjct: 331 HCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKI 373
>gi|346703736|emb|CBX24404.1| hypothetical_protein [Oryza glaberrima]
Length = 1765
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 177/362 (48%), Gaps = 7/362 (1%)
Query: 150 MDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG-TFGLEKNTETMN 207
D + L+ MS G T + ++ ++ AG A + + + +G N
Sbjct: 1057 FDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATKMCERVREQYGSLPEVTHCN 1116
Query: 208 LLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
LL L ++ + + AR ++ E L + ++ + + G C RV+E I+ G
Sbjct: 1117 RLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGA 1176
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
GC P V+ Y+ +I YCR+ + + LL EM+ +G P +VTY +++++L K GD E+
Sbjct: 1177 GCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKI 1236
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
+ +M+ G P+ + +N +I L + +A+ + + +M +G PD TFNT+IT
Sbjct: 1237 GSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILK-QMFASGCDPDIITFNTLIT 1295
Query: 387 MFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHH 446
H GH KA H L E + E PN ++ PL+ G+ S LL +M+ + H
Sbjct: 1296 GLCHEGHVRKAEHFLREAIRRE-LNPNQLSYTPLIHGFCMRGEL-MVASDLLVEMMGRGH 1353
Query: 447 LSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAE 506
+ D+ T+ +IHGL A K A ++ ++M + P +++ + +K M AA+
Sbjct: 1354 -TPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAK 1412
Query: 507 KI 508
I
Sbjct: 1413 NI 1414
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 169/416 (40%), Gaps = 46/416 (11%)
Query: 122 RWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALL---EEMSKGHIVTLNTIAKVMRRF 178
RW C + Y +++D G R+ D R LL E +KG + TL T ++
Sbjct: 1173 RWGAGCIPH---VVFYNVLID--GYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWL 1227
Query: 179 SGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNA 237
G E F E+ G N + N ++D LCK A + ++ S P+
Sbjct: 1228 GKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDI 1287
Query: 238 HTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDE 297
TFN I G C V +A+ ++E +P +SY+ +I +C + +LL E
Sbjct: 1288 ITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVE 1347
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA-- 355
M +G P+VVT+ ++ L +G EA+ + EKM PD +N LI L +
Sbjct: 1348 MMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRM 1407
Query: 356 -------------SRVQEAVYVYQVE-------------------MPENGVAPDTSTFNT 383
VQ +VY M G+ PD + N
Sbjct: 1408 LPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNA 1467
Query: 384 MITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVN 443
MI + G +A + M K+ C P+ T+ ++ K G + L L D +
Sbjct: 1468 MIKGYCQFGMMSEAILCMSNMRKV-GCIPDEFTYTTVISGYAKQGNLNGALRWLCDMI-- 1524
Query: 444 KHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQK 499
K ++ TY+ +I+G C+ ++A LF M ++P T +++ + +K
Sbjct: 1525 KRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTILIGSLFKK 1580
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 124/273 (45%), Gaps = 6/273 (2%)
Query: 156 LLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK 215
L+E M +GH + T ++ AG+ +A+ +++ + + N+L+ LCK
Sbjct: 1345 LVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCK 1404
Query: 216 EGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVIS 274
+ + A+++ E L+ + P+ + I G+ + + +A+ + M+ G P ++S
Sbjct: 1405 KRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVS 1464
Query: 275 YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
+ +I+ YC+ S+ + M+ GC P+ TYTTV+S AK G+ A+R M
Sbjct: 1465 CNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMI 1524
Query: 335 IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHH 394
KP+ ++ LI + A ++ M ++P+ T+ +I
Sbjct: 1525 KRKCKPNVVTYSSLINGYCKTGDTDFAEGLF-ANMQAEALSPNVVTYTILIGSLFKKDKV 1583
Query: 395 EKAFHVLEEMNKLEHCKPNVQTFHPL---LKSC 424
+A E M L HC PN T H L L SC
Sbjct: 1584 LRAGLYFETM-LLNHCSPNDVTLHYLVNGLTSC 1615
>gi|255549371|ref|XP_002515739.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545176|gb|EEF46686.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 613
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 174/350 (49%), Gaps = 6/350 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +V+ K+ + + +L M +V T ++ + +G+ +A + F+++
Sbjct: 253 YNTLVNAYIKIMDFEGVNEMLRLMEMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKML 312
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
G+E + ++ CK G ++ A ++F EL + + NAHT+ IHG C ++D
Sbjct: 313 ERGVEADIHVFTSIISWQCKLGNMKRAFALFDELNERGLVANAHTYGALIHGTCNSGQLD 372
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
A+ + EM+ G ++ ++T+I YC++ + + D M+ +G ++ TY T+
Sbjct: 373 AAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIA 432
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
L K EEA R M G P++ F +I + + EA V+Q +M + G
Sbjct: 433 GGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQ-DMKKKGE 491
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
P+ T+NT+I +S G ++A+ + +EM + ++ T+ L+ GK +E L
Sbjct: 492 KPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESI-GMTSDIYTYTTLVHGECVFGKVEEAL 550
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
+ L + V + L++ I TYT +I GL + + E A+ L+ EM+ +TP
Sbjct: 551 TLL--NEVCRKGLAISIVTYTAIISGLSKEGRSEEAFRLYDEMMAAGLTP 598
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 162/345 (46%), Gaps = 11/345 (3%)
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF---LELK 230
+ R + +E+ + FD + GL+ + + + L L + ++ ++ F +E K
Sbjct: 151 LFRVYVDNSMFEEGFKVFDYMVHNGLKIDDRSCIVCLLALKRSDQMVMSLGFFKKMVEFK 210
Query: 231 SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSK 290
+ ++ I I G CK RV+ A+ + EM G G P V++Y+T++ +Y + +F
Sbjct: 211 --VDVTVYSMTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEG 268
Query: 291 VYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIY 350
V E+L M+ N TYT ++ + SG EA ++ EKM G + D F +I
Sbjct: 269 VNEMLRLMEMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIIS 328
Query: 351 TLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHC 410
+ ++ A ++ E+ E G+ + T+ +I + G + A ++ EM +
Sbjct: 329 WQCKLGNMKRAFALFD-ELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQS-QGL 386
Query: 411 KPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWA 470
N+ F+ L+ K G DE L + D++ K DI TY + GLC+ N+ E A
Sbjct: 387 DMNLVIFNTLINGYCKKGMIDEALR--MQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEA 444
Query: 471 YLLFKEMIGHDITPRYQTCRLILD-EVKQKHMYDAAEKIEAVMKK 514
M+ + P + +++D K+ ++ + AE++ MKK
Sbjct: 445 KRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLVE-AERVFQDMKK 488
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 118/240 (49%), Gaps = 3/240 (1%)
Query: 149 QMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN 207
Q+D L+ EM S+G + L ++ + G ++A+R D + G E + T N
Sbjct: 370 QLDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYN 429
Query: 208 LLLDTLCKEGKVELA-RSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
+ LCK + E A R +F ++ + PNA +F I I CK + EA+ Q+MK
Sbjct: 430 TIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKK 489
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
G P V++Y+T+I Y ++ + Y L DEM++ G ++ TYTT++ G EEA
Sbjct: 490 GEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEEA 549
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
+ + ++ G + +I L + R +EA +Y EM G+ PD + +++
Sbjct: 550 LTLLNEVCRKGLAISIVTYTAIISGLSKEGRSEEAFRLYD-EMMAAGLTPDDRVYTSLVA 608
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 73/140 (52%), Gaps = 1/140 (0%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTF 240
G +A R F ++ G + N T N L+D K+GK++ A + E++S + + +T+
Sbjct: 474 GNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGMTSDIYTY 533
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
+HG C +V+EA + E+ G +++Y+ II ++ + + L DEM A
Sbjct: 534 TTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSKEGRSEEAFRLYDEMMA 593
Query: 301 QGCPPNVVTYTTVMSYLAKS 320
G P+ YT++++ L K+
Sbjct: 594 AGLTPDDRVYTSLVANLHKT 613
>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
Length = 584
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 173/370 (46%), Gaps = 6/370 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G + + Y +VD K R++ A+L M S G + T +++ F G+ DA
Sbjct: 199 GLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDA 258
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHG 246
+ + + G +T + N+L+ LC G ++ A F +K + + PNA T++ + G
Sbjct: 259 LSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDG 318
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
+ +D A EMK GC P V+ Y+ +I C++ F + L+D+M CPPN
Sbjct: 319 FSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPN 378
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
VT+ T++ L G A+ + M+ G P+ R +N L++ L R ++A +
Sbjct: 379 TVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDA-FAMV 437
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
+EM NG T+NT+I + A +L M ++ +P+ TF+ ++ + K
Sbjct: 438 IEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRM-MVQGIQPDAFTFNAIIHAYCK 496
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
GK ++ L +N + ++ YT++I LC K A + +M+ I P
Sbjct: 497 EGKVS--IAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNE 554
Query: 487 QTCRLILDEV 496
T +++ +
Sbjct: 555 ATWNVLVRAI 564
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 167/389 (42%), Gaps = 38/389 (9%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK--------GHIVTLNTIAKVMRRFSG 180
G + + Y +++ L + ++D R +L+EMS+ H ++ + K+ R
Sbjct: 99 GVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEA 158
Query: 181 AG------------------------QWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKE 216
G WE +E+ GL+ N T ++D CK
Sbjct: 159 RGFLAETVPVQASYNAVVHALCGEFRMWE-VFSVVNEMVQRGLQPNVVTYTTIVDAFCKA 217
Query: 217 GKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISY 275
++ +A ++ + S PN TF + G+ + +V +A M G P ISY
Sbjct: 218 RELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISY 277
Query: 276 STIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKI 335
+ +I+ C + + + M+ PN TY+T++ + +GD + A+ I +MK
Sbjct: 278 NVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKS 337
Query: 336 VGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHE 395
G KP+ + +I L + +A + + +N P+T TFNT+I G
Sbjct: 338 SGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDN-CPPNTVTFNTLIGRLCDCGRVG 396
Query: 396 KAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYT 455
+A +V M + C PN +T++ LL F+ G + + +++ + N LSL TY
Sbjct: 397 RALNVFHGMRR-NGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSL--VTYN 453
Query: 456 LVIHGLCRANKCEWAYLLFKEMIGHDITP 484
VI+ LC+ + A LL M+ I P
Sbjct: 454 TVINCLCQMCMRKHAMLLLGRMMVQGIQP 482
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 173/392 (44%), Gaps = 22/392 (5%)
Query: 111 KDDWKSALGIFRWAGSCPG-----YEHSS--------EIYEMMVDILGKVRQMDQMRALL 157
+D +A+G F AGS Y S +Y ++D L + + + +
Sbjct: 33 EDALVAAIGAFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVY 92
Query: 158 EEMSKGHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKE 216
+ M K + + T ++R + + A + DE+ G + + ++ +CK
Sbjct: 93 DNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKL 152
Query: 217 GKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYS 276
G+VE AR E +P A ++N +H C R+ E + EM G P V++Y+
Sbjct: 153 GRVEEARGFLAET---VPVQA-SYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYT 208
Query: 277 TIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIV 336
TI+ ++C+ +L M + GC PNV+T+T ++ + G +A+ + M
Sbjct: 209 TIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDE 268
Query: 337 GSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEK 396
G P + +N LI L ++ A+ + M N + P+ +T++T++ FS+ G +
Sbjct: 269 GWAPSTISYNVLIRGLCCIGDLKGALDFFN-SMKRNALLPNATTYSTLVDGFSNAGDLDG 327
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTL 456
A + EM K CKPNV + ++ K D+ S L+D M+ + + T+
Sbjct: 328 AMLIWNEM-KSSGCKPNVVVYTNMIDVLCKKMMFDQAES-LIDKML-MDNCPPNTVTFNT 384
Query: 457 VIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+I LC + A +F M + P +T
Sbjct: 385 LIGRLCDCGRVGRALNVFHGMRRNGCHPNDRT 416
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 144/345 (41%), Gaps = 15/345 (4%)
Query: 175 MRRFSG----AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK 230
MR+ SG AG + E+ G+ + + + + G + A F
Sbjct: 1 MRQPSGGLPAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRAS 60
Query: 231 --SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
C P +N + + N V M+ G P V +Y+ +I++ C+
Sbjct: 61 DLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRV 120
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
++LDEM +GC P+ V++ T++S + K G EEA + + + P +N +
Sbjct: 121 DAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEA-----RGFLAETVPVQASYNAV 175
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
++ L R+ E V EM + G+ P+ T+ T++ F A +L M +
Sbjct: 176 VHALCGEFRMWEVFSVVN-EMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSM- 233
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
C PNV TF L+K F+ GK + LS + MV++ I +Y ++I GLC +
Sbjct: 234 GCTPNVLTFTALVKGFFEDGKVHDALS-MWHWMVDEGWAPSTI-SYNVLIRGLCCIGDLK 291
Query: 469 WAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
A F M + + P T ++D D A I MK
Sbjct: 292 GALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMK 336
>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
Length = 716
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 176/406 (43%), Gaps = 41/406 (10%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLN-TIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +V L K R M + A L +M ++ N T ++ +S GQW++AVR F E+
Sbjct: 261 YSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMR 320
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVF----------------------------- 226
+ + T+N+L+ +LCK GK++ AR VF
Sbjct: 321 RHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLV 380
Query: 227 -------LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
L L I P+ +TF++ I + +D+A EM+ HG P V++Y+T+I
Sbjct: 381 DMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVI 440
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
+ CR E ++M QG P+ Y ++ G +A + ++ G +
Sbjct: 441 AALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMR 500
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
D FF+ +I L + R+ +A ++ + + G PD ++ ++ + G EKA
Sbjct: 501 LDIVFFSSIINNLCKLGRIMDAQNIFDLTV-NVGQHPDAVVYSMLMDGYCLVGKMEKALR 559
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIH 459
V + M +PNV + L+ K G+ DE LS L +M+ K + Y ++I
Sbjct: 560 VFDAMVS-AGIEPNVVVYGTLVNGYCKIGRIDEGLS-LFREMLQK-GIKPSTILYNIIID 616
Query: 460 GLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
GL A + A + F EM I T ++L + +D A
Sbjct: 617 GLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEA 662
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 172/357 (48%), Gaps = 17/357 (4%)
Query: 167 TLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF 226
T +T A +M + A + E A+ F +L GL + N LL C+ + + A +
Sbjct: 114 TSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDIL 173
Query: 227 L----ELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG--CHPCVISYSTIIQ 280
L EL C+P + +++I + C + +A ++ M G C P V++Y+T+I
Sbjct: 174 LHRTPEL-GCVP-DVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVID 231
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
+ ++ + +K +L EM +G PP++VTY++V+ L K+ +A +M G P
Sbjct: 232 CFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLP 291
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
D+ +N LIY + +EAV V++ EM + + PD T N ++ +G ++A V
Sbjct: 292 DNWTYNNLIYGYSSTGQWKEAVRVFK-EMRRHSILPDVVTLNMLMGSLCKYGKIKEARDV 350
Query: 401 LEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLD--DMVNKHHLSLDITTYTLVI 458
+ M ++ P+V ++ +L G CL + D D++ ++ DI T++++I
Sbjct: 351 FDTM-AMKGQNPDVFSYKIMLNGYATKG----CLVDMTDLFDLMLGDGIAPDIYTFSVLI 405
Query: 459 HGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEAVMKK 514
+ A ++F EM H + P T ++ + + M DA EK ++ +
Sbjct: 406 KAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQ 462
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 141/301 (46%), Gaps = 10/301 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
+ +++ +D+ + EM K +VT T+ + R G+ +DA+ F+
Sbjct: 401 FSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRI---GKMDDAMEKFN 457
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKIN 251
++ G+ + + L+ C G + A+ + LE + + + + F+ I+ CK+
Sbjct: 458 QMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLG 517
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
R+ +AQ G HP + YS ++ YC K + D M + G PNVV Y
Sbjct: 518 RIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYG 577
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
T+++ K G +E + + +M G KP + +N +I L A R A + EM E
Sbjct: 578 TLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFH-EMTE 636
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
+G+A + T+N ++ F + ++A + +E+ + + K ++ T + ++ F+T + +
Sbjct: 637 SGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAM-NVKIDIITLNTMIAGMFQTRRVE 695
Query: 432 E 432
E
Sbjct: 696 E 696
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 99/222 (44%), Gaps = 2/222 (0%)
Query: 156 LLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK 215
+LE M+ G + + + ++ G+ DA FD G + ++L+D C
Sbjct: 491 ILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCL 550
Query: 216 EGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVIS 274
GK+E A VF + S I PN + ++G+CKI R+DE +EM G P I
Sbjct: 551 VGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTIL 610
Query: 275 YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
Y+ II EM G N TY V+ K+ F+EAI + ++++
Sbjct: 611 YNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELR 670
Query: 335 IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
+ K D N +I + + RV+EA ++ + +G+ P
Sbjct: 671 AMNVKIDIITLNTMIAGMFQTRRVEEAKDLF-ASISRSGLVP 711
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 82/190 (43%), Gaps = 6/190 (3%)
Query: 299 QAQG---CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
+AQG P TY +M ++ E A+ ++ G + D N L+ A
Sbjct: 104 RAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEA 163
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH-CKPNV 414
R EA+ + PE G PD +++ ++ G +A +L M + C P+V
Sbjct: 164 KRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDV 223
Query: 415 QTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLF 474
+ ++ FK G ++ L +MV + + D+ TY+ V+H LC+A A
Sbjct: 224 VAYTTVIDCFFKEGDVNKA-CDLFKEMVQR-GIPPDLVTYSSVVHALCKARAMGKAEAFL 281
Query: 475 KEMIGHDITP 484
++M+ + P
Sbjct: 282 RQMVNKGVLP 291
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 85/183 (46%), Gaps = 2/183 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G + +Y M++D V +M++ + + M S G + ++ + G+ ++
Sbjct: 533 GQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEG 592
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHG 246
+ F E+ G++ +T N+++D L G+ A+ F E+ +S I N T+NI + G
Sbjct: 593 LSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRG 652
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
+ K DEA + +E++ +I+ +T+I + + +L + G P
Sbjct: 653 FFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPC 712
Query: 307 VVT 309
VVT
Sbjct: 713 VVT 715
>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 670
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 172/371 (46%), Gaps = 10/371 (2%)
Query: 120 IFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRF 178
IF+ Y+ + +++ R+ + +L+ M + G ++T + +
Sbjct: 75 IFKSRPQFGSYKLGDATFYRLIENYATSREFHFIHQVLDRMKREGRVLTETIFILIFKAC 134
Query: 179 SGAGQWEDAVRTFDELGT-FGLEKNTETMNLLLDTLCKEGKVELARSVFLEL----KSCI 233
A +AV F + ++ ++ N +L+ + +EG A +L +
Sbjct: 135 GKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGF 194
Query: 234 PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
PN T+N+ I CK+ ++D A T +EM C+P V +YST++ C++ +
Sbjct: 195 QPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVF 254
Query: 294 LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLG 353
LLDEMQA+GC PN VT+ ++ L+K+GD A ++ + M + G P+ +N LI+ L
Sbjct: 255 LLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLC 314
Query: 354 RASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPN 413
++ +A+ + + +M + P+ T+ T+I E H+L M + K N
Sbjct: 315 LKGKLDKALSLLE-KMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQ-KAN 372
Query: 414 VQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLL 473
+ L+ FK GK++ + +L +M K ++ Y I GLCR K + A +
Sbjct: 373 EYIYSSLISGLFKEGKSENAV-RLWKEMAEK-GCKPNVVVYGAFIDGLCRDEKPDEAEDI 430
Query: 474 FKEMIGHDITP 484
+EM+ P
Sbjct: 431 LQEMLSKGFLP 441
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 110/466 (23%), Positives = 196/466 (42%), Gaps = 40/466 (8%)
Query: 72 SKVHVGSSEDEVFQSLKQD-HVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGY 130
K H+ F + D H ++ + ++N +I + + + + G+
Sbjct: 135 GKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGF 194
Query: 131 EHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVR 189
+ + Y +++ L K+ Q+D+ EM K + T + +M + ++AV
Sbjct: 195 QPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVF 254
Query: 190 TFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGW 247
DE+ G N T N+L+D L K G + A + + LK C+P N T+N IHG
Sbjct: 255 LLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVP-NEVTYNTLIHGL 313
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
C ++D+A +++M C P ++Y TII +Q +L M+ +G N
Sbjct: 314 CLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANE 373
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
Y++++S L K G E A+R+ ++M G KP+ + I L R + EA + Q
Sbjct: 374 YIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQ- 432
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM----------------NKL---- 407
EM G P+ T+++++ F G +KA V +EM N L
Sbjct: 433 EMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESG 492
Query: 408 --------------EHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
E KP+V + ++K G D+ L + + D+ T
Sbjct: 493 RLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVT 552
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQK 499
Y ++ + LCR + A L M+ P TC + L+ ++++
Sbjct: 553 YNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRER 598
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 88/205 (42%), Gaps = 8/205 (3%)
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
T+ ++ A S +F ++ ++MK G F + G+A EAV +
Sbjct: 90 ATFYRLIENYATSREFHFIHQVLDRMKREGRVLTETIFILIFKACGKAHLPGEAVNFFHR 149
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAF----HVLEEMNKLEHCKPNVQTFHPLLKS 423
+ +FN+++ + G AF HV +K +PN+ T++ ++K+
Sbjct: 150 MANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSK--GFQPNLLTYNLIIKA 207
Query: 424 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
K G+ D + + + + + D+ TY+ +++GLC+ + + A L EM
Sbjct: 208 LCKLGQIDRAVDTFRE--MPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCL 265
Query: 484 PRYQTCRLILDEVKQKHMYDAAEKI 508
P T +++D + + A K+
Sbjct: 266 PNPVTFNVLIDALSKNGDLSRAAKL 290
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/307 (19%), Positives = 122/307 (39%), Gaps = 56/307 (18%)
Query: 97 QPSHYLVNKLIHRFKDDWKSALGIFRWAGSC-PGYEHSSEIYEMMVDILGKVRQMDQMRA 155
+ + Y+ + LI + KS + W G + + +Y +D L + + D+
Sbjct: 370 KANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAED 429
Query: 156 LLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLC 214
+L+EM SKG + T + +M+ F G + A+ + E+ + + N ++LL+ LC
Sbjct: 430 ILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLC 489
Query: 215 KEGKVELARSV-----------------------------------FLELKSCIP---PN 236
+ G++ A +V F E++ P P+
Sbjct: 490 ESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPD 549
Query: 237 AHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYEL-L 295
T+NI + C+ + + A + M GC P ++ + +++ + N + L L
Sbjct: 550 VVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFL 609
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
DE+ + L K A+RI E+M + P+ ++ +I +
Sbjct: 610 DELVVR---------------LLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKP 654
Query: 356 SRVQEAV 362
R++E +
Sbjct: 655 KRIRETI 661
>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 873
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 161/317 (50%), Gaps = 17/317 (5%)
Query: 168 LNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFL 227
+NT ++ + E+A+R +++G +G + T N +L LCK ++ R + L
Sbjct: 211 VNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLL 270
Query: 228 ELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQY 286
++K S + PN +T+NI +HG+CK+ + EA I+ M G G P V +Y+T+++ C +
Sbjct: 271 QMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEG 330
Query: 287 NFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFN 346
+ L D+M++ P+VVTY T++ + + A ++ E+MK G K + N
Sbjct: 331 KIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHN 390
Query: 347 CLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNK 406
+I ++ EA V V+M E+G +PD T+NTMI + G +A+ +++EM +
Sbjct: 391 IMIKWFCTEGKIDEASNV-MVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGR 449
Query: 407 LEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDM------VNKHHLSLDITTYTLVIHG 460
+ K + T + LL + CL + LDD K LD TY +I G
Sbjct: 450 -KGLKLDTFTLNTLLHTM--------CLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMG 500
Query: 461 LCRANKCEWAYLLFKEM 477
+ + + A L++EM
Sbjct: 501 YFKDEQADRALKLWEEM 517
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 147/291 (50%), Gaps = 8/291 (2%)
Query: 191 FDELGTFGLEKNTETMNLLLDTLCKEGK---VELARSVFLE-LKSCIPPNAHTFNIFIHG 246
F+++ N T N LL+ L + + +R VF + +K + PN +TFNI IHG
Sbjct: 161 FNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILIHG 220
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
+C N +EA I +M +GC P ++Y+T++ + C++ ++V +LL +M+ G PN
Sbjct: 221 YCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPN 280
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
TY ++ K +EA + E M G PD +N ++ L ++ EAV +
Sbjct: 281 RNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRD 340
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
+M + PD T+NT+I H + AF ++EEM K K N T + ++K
Sbjct: 341 -KMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEM-KARGVKENGVTHNIMIKWFCT 398
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
GK DE S ++ MV + S D TY +I+G C+A K AY + EM
Sbjct: 399 EGKIDEA-SNVMVKMV-ESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEM 447
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/378 (26%), Positives = 185/378 (48%), Gaps = 14/378 (3%)
Query: 137 YEMMVDIL---GKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y MV L GK+ + ++R +E +VT NT+ G+ + A + +
Sbjct: 319 YNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGS---DAAFKLVE 375
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKIN 251
E+ G+++N T N+++ C EGK++ A +V +++ +S P+ T+N I+G+CK
Sbjct: 376 EMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAG 435
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
++ EA + EM G + +T++ + C + Y L + + +G + VTY
Sbjct: 436 KMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYG 495
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
T++ K + A+++ E+MK G +N +I L + + +AV E+ E
Sbjct: 496 TLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLN-ELLE 554
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHC-KPNVQTFHPLLKSCFKTGKT 430
G+ PD ST N +I + G EKAF +M +EH KP++ T + LL+ + G
Sbjct: 555 KGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKM--VEHSLKPDIFTCNILLRGLCREGML 612
Query: 431 DECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCR 490
++ L+ L + ++K +D TY ++I C+ + E A+ L EM G ++ P T
Sbjct: 613 EKGLT-LFNTWISKGK-PMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYN 670
Query: 491 LILDEVKQKHMYDAAEKI 508
I+ + + + AEK+
Sbjct: 671 AIVTGLTKAGRTEEAEKL 688
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/453 (24%), Positives = 216/453 (47%), Gaps = 17/453 (3%)
Query: 62 PRLPDIDVIISK-VHVGSSEDEVF-QSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSA 117
P L + +++ V SS VF + + QD V +QP+ N LIH + ++ + A
Sbjct: 171 PNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILIHGYCSDNNTEEA 230
Query: 118 LGIFRWAGS---CPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAK 173
L + G CP + Y ++ L K Q+ Q+R LL +M + G NT
Sbjct: 231 LRLINQMGEYGCCP----DNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNI 286
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC- 232
++ + ++A + + G+ + T N ++ LC EGK++ A + +++S
Sbjct: 287 LVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFK 346
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
+ P+ T+N I G + D A ++EMK G ++++ +I+ +C + +
Sbjct: 347 LVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEAS 406
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
++ +M G P+ TY T+++ K+G EA ++ ++M G K D+ N L++T+
Sbjct: 407 NVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTM 466
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
++ +A Y ++ + G D T+ T+I + ++A + EEM K
Sbjct: 467 CLEKQLDDA-YTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEM-KETGIVA 524
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
+ T++ +++ +GKTD+ + + L++++ K L D +T ++IHG C E A+
Sbjct: 525 TIITYNTIIRGLCLSGKTDQAVDK-LNELLEK-GLVPDESTSNIIIHGYCWEGAVEKAFQ 582
Query: 473 LFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
+M+ H + P TC ++L + ++ M +
Sbjct: 583 FHNKMVEHSLKPDIFTCNILLRGLCREGMLEKG 615
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 125/266 (46%), Gaps = 14/266 (5%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
GY Y ++ K Q D+ L EEM + G + T+ T ++R +G+ + A
Sbjct: 486 GYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQA 545
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHG 246
V +EL GL + T N+++ C EG VE A ++ + + P+ T NI + G
Sbjct: 546 VDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRG 605
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C+ +++ G ++Y+ II S+C++ ++L+ EM+ + P+
Sbjct: 606 LCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPD 665
Query: 307 VVTYTTVMSYLAKSGDFEE----AIRITEKMKIVGSKPDS-------RFFNCLIYTLGRA 355
TY +++ L K+G EE A++ EK + V ++ S ++ I +L
Sbjct: 666 RYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQ 725
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTF 381
+ ++A+ ++Q + + GV+ + T+
Sbjct: 726 GKYKDAMKLFQ-QAEQKGVSLNKYTY 750
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 106/232 (45%), Gaps = 21/232 (9%)
Query: 292 YELLDEMQAQGCPPNVVTYTTVMSYLAKSGD----------FEEAIRITEKMKIVGSKPD 341
+++ ++M+ PN++T T+++ L +S F++A+++ G +P+
Sbjct: 158 HQIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKL-------GVQPN 210
Query: 342 SRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVL 401
FN LI+ + +EA+ + +M E G PD T+NT++T + +L
Sbjct: 211 VNTFNILIHGYCSDNNTEEALRLIN-QMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLL 269
Query: 402 EEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGL 461
+M K PN T++ L+ K E +++++ M K L D+ TY ++ GL
Sbjct: 270 LQM-KNSGLFPNRNTYNILVHGYCKLKWLKEA-AEVIELMTGKGMLP-DVWTYNTMVRGL 326
Query: 462 CRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
C K + A L +M + P T ++D + DAA K+ MK
Sbjct: 327 CDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMK 378
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 78/176 (44%), Gaps = 15/176 (8%)
Query: 156 LLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK 215
++E K I T N + +R G E + F+ + G +T T N+++ + CK
Sbjct: 587 MVEHSLKPDIFTCNIL---LRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCK 643
Query: 216 EGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTI-------QEMKGHG 267
E ++E A + E++ + P+ +T+N + G K R +EA+ Q++K
Sbjct: 644 ERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQD 703
Query: 268 CHPCV----ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK 319
P + + YS I S C Q + +L + + +G N TY +M L K
Sbjct: 704 TSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGLLK 759
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 182/401 (45%), Gaps = 58/401 (14%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK----GHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
+ MV+ L K +M+ R + +EM + +V+ NT+ + + G +++ F
Sbjct: 84 FNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTL---LSGYCKVGCLHESLAVFS 140
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKIN 251
E+ GL + T L+ CK G +E A ++ +++ + N TF I G+CK
Sbjct: 141 EMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKG 200
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
+D+A ++EM+ G P V+ Y+ +I YC+ EL+ EM+A+ P+VVTY+
Sbjct: 201 FLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYS 260
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
T++S K G+ + A ++ +KM G PD+ ++ LI L R+ +A +++ M +
Sbjct: 261 TIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFE-NMLQ 319
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
GV PD T+ T+I G+ EKA + +EM + + P+V T+ L+ K+ +T
Sbjct: 320 LGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIR-KGVLPDVVTYSVLINGLSKSARTK 378
Query: 432 E------------------------------------------CLSQLLD--DMVNKHHL 447
E C+ L+ D V + L
Sbjct: 379 EAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSML 438
Query: 448 S----LDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
LD + Y+++IHG CR A K+M+ +P
Sbjct: 439 DRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSP 479
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 156/323 (48%), Gaps = 6/323 (1%)
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSV--FLELKS 231
++R G+ E+AV ++ G N T N L+ C+ G+++ A V + +
Sbjct: 16 LVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEG 75
Query: 232 CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKV 291
PN TFN ++G CK R++ A+ EM G P V+SY+T++ YC+ +
Sbjct: 76 NAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHES 135
Query: 292 YELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYT 351
+ EM +G P+VVT+T+++ K+G+ E+A+ + +M+ G + + F LI
Sbjct: 136 LAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDG 195
Query: 352 LGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCK 411
+ + +A+ + EM + G+ P +N +I + G + A ++ EM + + K
Sbjct: 196 FCKKGFLDDALLAVE-EMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREM-EAKRVK 253
Query: 412 PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAY 471
P+V T+ ++ K G D QL M+ K L D TY+ +I GLC + A
Sbjct: 254 PDVVTYSTIISGYCKVGNLDSAF-QLNQKMLKKGVLP-DAITYSSLIRGLCEEKRLNDAC 311
Query: 472 LLFKEMIGHDITPRYQTCRLILD 494
LF+ M+ + P T ++D
Sbjct: 312 ELFENMLQLGVQPDEFTYTTLID 334
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 188/382 (49%), Gaps = 21/382 (5%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKG----HIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++V L ++++ ++ +M + VT NT+ F AG+ + A R
Sbjct: 13 YNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAA---FCRAGELDGAERVVS 69
Query: 193 ELGTFGLEK-NTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKI 250
+ G K N T N +++ LCK G++E AR VF E+ + + P+ ++N + G+CK+
Sbjct: 70 LMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKV 129
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
+ E+ EM G P V++++++I + C+ N + L+ +M+ +G N VT+
Sbjct: 130 GCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTF 189
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIY---TLGRASRVQEAVYVYQV 367
T ++ K G ++A+ E+M+ G +P +N LI LGR +E +
Sbjct: 190 TALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIR---- 245
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS-CFK 426
EM V PD T++T+I+ + G+ + AF + ++M K + P+ T+ L++ C +
Sbjct: 246 EMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLK-KGVLPDAITYSSLIRGLCEE 304
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
D C +L ++M+ + + D TYT +I G C+ E A L EMI + P
Sbjct: 305 KRLNDAC--ELFENML-QLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDV 361
Query: 487 QTCRLILDEVKQKHMYDAAEKI 508
T ++++ + + A ++
Sbjct: 362 VTYSVLINGLSKSARTKEAHRL 383
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 147/318 (46%), Gaps = 41/318 (12%)
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFS--- 289
+ PN +T+NI + C R++EA + +M+G GC P ++Y+T++ ++CR
Sbjct: 6 VAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAE 65
Query: 290 KVYELL---------------------------------DEMQAQGCPPNVVTYTTVMSY 316
+V L+ DEM +G P+VV+Y T++S
Sbjct: 66 RVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSG 125
Query: 317 LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
K G E++ + +M G PD F LI+ +A +++AV + +M E G+
Sbjct: 126 YCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALV-AQMRERGLRM 184
Query: 377 DTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQ 436
+ TF +I F G + A +EEM K +P+V ++ L+ K G+ D L++
Sbjct: 185 NEVTFTALIDGFCKKGFLDDALLAVEEMRKC-GIQPSVVCYNALINGYCKLGRMD--LAR 241
Query: 437 LLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT-CRLILDE 495
L + + D+ TY+ +I G C+ + A+ L ++M+ + P T LI
Sbjct: 242 ELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGL 301
Query: 496 VKQKHMYDAAEKIEAVMK 513
++K + DA E E +++
Sbjct: 302 CEEKRLNDACELFENMLQ 319
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 117/223 (52%), Gaps = 5/223 (2%)
Query: 263 MKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGD 322
M HG P V +Y+ ++++ C + + ++ +M+ GC PN VTY T+++ ++G+
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 323 FEEAIRITEKMKIVG-SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTF 381
+ A R+ M+ G +KP+ FN ++ L +A R++ A V+ EM G+APD ++
Sbjct: 61 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFD-EMVREGLAPDVVSY 119
Query: 382 NTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDM 441
NT+++ + G ++ V EM + P+V TF L+ + K G ++ ++ L
Sbjct: 120 NTLLSGYCKVGCLHESLAVFSEMTQ-RGLVPDVVTFTSLIHATCKAGNLEQAVA--LVAQ 176
Query: 442 VNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
+ + L ++ T+T +I G C+ + A L +EM I P
Sbjct: 177 MRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQP 219
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 92/208 (44%), Gaps = 3/208 (1%)
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
M G PNV TY ++ L G EEA+ + M+ G P++ +N L+ RA
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 358 VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTF 417
+ A V + E P+ TFN+M+ G E A V +EM + E P+V ++
Sbjct: 61 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVR-EGLAPDVVSY 119
Query: 418 HPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
+ LL K G E L+ + + + L D+ T+T +IH C+A E A L +M
Sbjct: 120 NTLLSGYCKVGCLHESLAVFSE--MTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQM 177
Query: 478 IGHDITPRYQTCRLILDEVKQKHMYDAA 505
+ T ++D +K D A
Sbjct: 178 RERGLRMNEVTFTALIDGFCKKGFLDDA 205
>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
Length = 708
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 152/305 (49%), Gaps = 6/305 (1%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHT 239
G + A +E+ G + N T L+D LCK+G E A +FL+L PN HT
Sbjct: 308 GSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHT 367
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+ I+G+CK ++++ A+ + M+ G P +Y+T+I +C+ NF + YEL+D M
Sbjct: 368 YTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMG 427
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
+G PN+ TY ++ L K G +EA R+ K+ + G + D + L+ R +
Sbjct: 428 KEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTN 487
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
++ + +M + G PD ++ T+I+ F +++ + EE L P +T+
Sbjct: 488 RSLVFFN-KMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLI-PTKKTYTS 545
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
++ + G T L+ L ++ H + D TY +I GLC+ +K + A L+ M+
Sbjct: 546 MICGYCRYGNTS--LAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMD 603
Query: 480 HDITP 484
++P
Sbjct: 604 KGLSP 608
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 101/430 (23%), Positives = 187/430 (43%), Gaps = 54/430 (12%)
Query: 117 ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMR 176
AL WA P + H +Y + L + +++ +++ M +
Sbjct: 117 ALSFLYWAIGFPKFRHFMRLYIVSATALIGNKNLERANEVMQCM--------------VM 162
Query: 177 RFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPP 235
F+ G+ ++AV E+ GL +T+T+N +LD G VE+A ++F+E+ + + P
Sbjct: 163 NFAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSP 222
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
+ +F + + C + RV EA+ + M G + + II ++C++ ++V
Sbjct: 223 DCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYF 282
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
+M G PNV+ +T +++ L K G ++A + E+M G KP+ LI L +
Sbjct: 283 WKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKK 342
Query: 356 SRVQEA----------------VYVYQV-------------------EMPENGVAPDTST 380
++A V+ Y M E G+ P+T+T
Sbjct: 343 GWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNT 402
Query: 381 FNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDD 440
+ T+I G+ +A+ +++ M K E PN+ T++ ++ K G DE L +
Sbjct: 403 YTTLIDGHCKVGNFVRAYELMDLMGK-EGFSPNIYTYNAIIDGLCKKGSLDEAYRLL--N 459
Query: 441 MVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT-CRLILDEVKQK 499
V+ H L D TYT+++ CR + + F +M+ TP + LI +QK
Sbjct: 460 KVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQK 519
Query: 500 HMYDAAEKIE 509
M ++ E
Sbjct: 520 QMKESERLFE 529
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 90/211 (42%), Gaps = 8/211 (3%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQW 184
G+ + Y ++D L K +D+ LL ++S + VT + V R + +
Sbjct: 430 GFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNR- 488
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIF 243
++ F+++ G + + L+ C++ +++ + +F E S + P T+
Sbjct: 489 --SLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSM 546
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
I G+C+ A Q M HGC P I+Y +I C++ L D M +G
Sbjct: 547 ICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGL 606
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
P VT T+ K D AI + ++++
Sbjct: 607 SPCEVTRLTLAYEYCKKDDSSTAINVLDRLE 637
>gi|255660884|gb|ACU25611.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
Length = 484
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 192/388 (49%), Gaps = 14/388 (3%)
Query: 100 HYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEE 159
H LV ++H K + AL FRW +EH+ E + +++ILG+ +++ R +L +
Sbjct: 12 HELVYNVLHSSKTS-EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLD 70
Query: 160 M-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
M KG + ++ + +++V+ F ++ G+E+ ++ N L + + G+
Sbjct: 71 MPKKGLEWDEDMWVMMIDSYGKEXIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGR 130
Query: 219 VELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
+A+ F ++ S I P HTFN+ I G+ +V+ A ++MK P V++Y+T
Sbjct: 131 YMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNT 190
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+I Y R + + EM+ + P VVTYTT++ ++A+R+ E+MK G
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFG 250
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP-DTSTFNTMITMFSHHGHHEK 396
KP++ ++ L+ L A + EA + + EM + +AP D S F +I+ G+ +
Sbjct: 251 IKPNAITYSTLLPGLCNAEXMSEARVILK-EMMDKYLAPTDNSIFMRLISSHCKSGNLDA 309
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK-------HHLSL 449
A VL+ M +L + L+++ K G+ D+ + +LLD ++ K L L
Sbjct: 310 AADVLKAMIRLS-VPTEAGHYGXLIENFCKXGQYDKAV-KLLDKLIEKDIILRPQSTLHL 367
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEM 477
+ + Y +I LC + A L +++
Sbjct: 368 EPSAYNPMIEYLCNNGQAXKAETLVRQL 395
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 132/311 (42%), Gaps = 4/311 (1%)
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQ 257
E N ET +++ L + K+ AR + L++ K + + + + I + K V E+
Sbjct: 41 FEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEXIVQESV 100
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
Q+M+ G + SY+ + + R+ + ++M ++G P T+ ++
Sbjct: 101 KMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGF 160
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
SG E A R E MK PD +N +I R +++EA Y VEM + P
Sbjct: 161 FLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEK-YFVEMKGRNIEPT 219
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
T+ T+I + + A ++EEM KPN T+ LL E +
Sbjct: 220 VVTYTTLIKGYVSVDQVDDALRLVEEMKGF-GIKPNAITYSTLLPGLCNAEXMSEA-RVI 277
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVK 497
L +M++K+ D + + +I C++ + A + K MI + +++
Sbjct: 278 LKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGXLIENFC 337
Query: 498 QKHMYDAAEKI 508
+ YD A K+
Sbjct: 338 KXGQYDKAVKL 348
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 126/267 (47%), Gaps = 6/267 (2%)
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
+ ++++ A+ + +M G + +I SY ++ + ++ +M+ G +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEXIVQESVKMFQKMEELGVERTIK 116
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
+Y + + + G + A R KM G +P FN +I+ + +V+ A ++ +
Sbjct: 117 SYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFE-D 175
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M ++PD T+NTMI + E+A EM K + +P V T+ L+K
Sbjct: 176 MKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEM-KGRNIEPTVVTYTTLIKGYVSVD 234
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ D+ L +L+++M + + TY+ ++ GLC A A ++ KEM+ + P +
Sbjct: 235 QVDDAL-RLVEEM-KGFGIKPNAITYSTLLPGLCNAEXMSEARVILKEMMDKYLAPTDNS 292
Query: 489 C--RLILDEVKQKHMYDAAEKIEAVMK 513
RLI K ++ AA+ ++A+++
Sbjct: 293 IFMRLISSHCKSGNLDAAADVLKAMIR 319
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 5/205 (2%)
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N T+ ++ L ++ A I M G + D + +I + G+ VQE+V ++
Sbjct: 44 NRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEXIVQESVKMF 103
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
Q +M E GV ++N + + G + A +M E +P TF+ ++ F
Sbjct: 104 Q-KMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLS-EGIEPTRHTFNVMIWGFF 161
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
+GK E ++ +DM ++ +S D+ TY +I+G R K E A F EM G +I P
Sbjct: 162 LSGKV-ETANRFFEDMKSRE-ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPT 219
Query: 486 YQT-CRLILDEVKQKHMYDAAEKIE 509
T LI V + DA +E
Sbjct: 220 VVTYTTLIKGYVSVDQVDDALRLVE 244
>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 646
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 172/371 (46%), Gaps = 10/371 (2%)
Query: 120 IFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRF 178
IF+ Y+ + +++ R+ + +L+ M + G ++T + +
Sbjct: 51 IFKSRPQFGSYKLGDATFYRLIENYATSREFHFIHQVLDRMKREGRVLTETIFILIFKAC 110
Query: 179 SGAGQWEDAVRTFDELGT-FGLEKNTETMNLLLDTLCKEGKVELARSVFLEL----KSCI 233
A +AV F + ++ ++ N +L+ + +EG A +L +
Sbjct: 111 GKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGF 170
Query: 234 PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
PN T+N+ I CK+ ++D A T +EM C+P V +YST++ C++ +
Sbjct: 171 QPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVF 230
Query: 294 LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLG 353
LLDEMQA+GC PN VT+ ++ L+K+GD A ++ + M + G P+ +N LI+ L
Sbjct: 231 LLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLC 290
Query: 354 RASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPN 413
++ +A+ + + +M + P+ T+ T+I E H+L M + K N
Sbjct: 291 LKGKLDKALSLLE-KMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQ-KAN 348
Query: 414 VQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLL 473
+ L+ FK GK++ + +L +M K ++ Y I GLCR K + A +
Sbjct: 349 EYIYSSLISGLFKEGKSENAV-RLWKEMAEK-GCKPNVVVYGAFIDGLCRDEKPDEAEDI 406
Query: 474 FKEMIGHDITP 484
+EM+ P
Sbjct: 407 LQEMLSKGFLP 417
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 110/466 (23%), Positives = 196/466 (42%), Gaps = 40/466 (8%)
Query: 72 SKVHVGSSEDEVFQSLKQD-HVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGY 130
K H+ F + D H ++ + ++N +I + + + + G+
Sbjct: 111 GKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGF 170
Query: 131 EHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVR 189
+ + Y +++ L K+ Q+D+ EM K + T + +M + ++AV
Sbjct: 171 QPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVF 230
Query: 190 TFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGW 247
DE+ G N T N+L+D L K G + A + + LK C+P N T+N IHG
Sbjct: 231 LLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVP-NEVTYNTLIHGL 289
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
C ++D+A +++M C P ++Y TII +Q +L M+ +G N
Sbjct: 290 CLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANE 349
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
Y++++S L K G E A+R+ ++M G KP+ + I L R + EA + Q
Sbjct: 350 YIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQ- 408
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM----------------NKL---- 407
EM G P+ T+++++ F G +KA V +EM N L
Sbjct: 409 EMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESG 468
Query: 408 --------------EHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
E KP+V + ++K G D+ L + + D+ T
Sbjct: 469 RLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVT 528
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQK 499
Y ++ + LCR + A L M+ P TC + L+ ++++
Sbjct: 529 YNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRER 574
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 88/205 (42%), Gaps = 8/205 (3%)
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
T+ ++ A S +F ++ ++MK G F + G+A EAV +
Sbjct: 66 ATFYRLIENYATSREFHFIHQVLDRMKREGRVLTETIFILIFKACGKAHLPGEAVNFFHR 125
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAF----HVLEEMNKLEHCKPNVQTFHPLLKS 423
+ +FN+++ + G AF HV +K +PN+ T++ ++K+
Sbjct: 126 MANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSK--GFQPNLLTYNLIIKA 183
Query: 424 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
K G+ D + + + + + D+ TY+ +++GLC+ + + A L EM
Sbjct: 184 LCKLGQIDRAVDTFRE--MPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCL 241
Query: 484 PRYQTCRLILDEVKQKHMYDAAEKI 508
P T +++D + + A K+
Sbjct: 242 PNPVTFNVLIDALSKNGDLSRAAKL 266
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/307 (19%), Positives = 122/307 (39%), Gaps = 56/307 (18%)
Query: 97 QPSHYLVNKLIHRFKDDWKSALGIFRWAGSC-PGYEHSSEIYEMMVDILGKVRQMDQMRA 155
+ + Y+ + LI + KS + W G + + +Y +D L + + D+
Sbjct: 346 KANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAED 405
Query: 156 LLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLC 214
+L+EM SKG + T + +M+ F G + A+ + E+ + + N ++LL+ LC
Sbjct: 406 ILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLC 465
Query: 215 KEGKVELARSV-----------------------------------FLELKSCIP---PN 236
+ G++ A +V F E++ P P+
Sbjct: 466 ESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPD 525
Query: 237 AHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYEL-L 295
T+NI + C+ + + A + M GC P ++ + +++ + N + L L
Sbjct: 526 VVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFL 585
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
DE+ + L K A+RI E+M + P+ ++ +I +
Sbjct: 586 DELVVR---------------LLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKP 630
Query: 356 SRVQEAV 362
R++E +
Sbjct: 631 KRIRETI 637
>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 575
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 183/366 (50%), Gaps = 6/366 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
G+ + IY ++D K ++++ + L EM K G + T ++ G +
Sbjct: 193 GFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQG 252
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHG 246
++++ G+ N T N +++ LCK+G+ + A VF E++ + N T+N I G
Sbjct: 253 FEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGG 312
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C+ + +EA + +MK + +P +I+Y+T+I +C K L +++++G P+
Sbjct: 313 LCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPS 372
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
+VTY ++S + GD A ++ ++M+ G KP + LI T R+ ++ A+ + +
Sbjct: 373 LVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQL-R 431
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
M E G+ PD T++ +I F G +A + + M + + +PN ++ ++ K
Sbjct: 432 SSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVE-KMLEPNEVIYNTMILGYCK 490
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
G + L +L DM K L+ ++ +Y+ +I LC+ K + A L ++MI I P
Sbjct: 491 EGSSYRAL-RLFRDMEEKE-LAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPSD 548
Query: 487 QTCRLI 492
C LI
Sbjct: 549 TICNLI 554
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 157/328 (47%), Gaps = 10/328 (3%)
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHT 239
AG+ E + EL FG N L+D CK+G++E A+ +F E+ K + N T
Sbjct: 176 AGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWT 235
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+ + IHG K + ++M+ HG P + +Y+ ++ C+ +++ DEM+
Sbjct: 236 YTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMR 295
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
+G N+VTY T++ L + EA ++ ++MK P+ +N LI ++
Sbjct: 296 ERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLG 355
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
+A+ + + ++ G++P T+N +++ F G A +++EM + KP+ T+
Sbjct: 356 KALSLCR-DLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEE-RGIKPSKVTYTI 413
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
L+ + F E QL M + L D+ TY+++IHG C + A LFK M+
Sbjct: 414 LIDT-FARSDNMETAIQLRSSM-EELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVE 471
Query: 480 HDITPR---YQTCRLILDEVKQKHMYDA 504
+ P Y T +IL K+ Y A
Sbjct: 472 KMLEPNEVIYNT--MILGYCKEGSSYRA 497
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 154/332 (46%), Gaps = 9/332 (2%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTF 240
G+ E A F E+G FGL N T +L+ L K G + ++ +++ + PN +T+
Sbjct: 212 GEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTY 271
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
N ++ CK R +A EM+ G +++Y+T+I CR+ ++ +++D+M++
Sbjct: 272 NCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKS 331
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
PN++TY T++ G +A+ + +K G P +N L+ R
Sbjct: 332 YVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSG 391
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
A + + EM E G+ P T+ +I F+ + E A + M +L P+V T+ L
Sbjct: 392 AAKMVK-EMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEEL-GLVPDVHTYSVL 449
Query: 421 LKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH 480
+ G+ +E S+L MV K L + Y +I G C+ A LF++M
Sbjct: 450 IHGFCIKGQMNEA-SRLFKSMVEKM-LEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEK 507
Query: 481 DITPRYQT----CRLILDEVKQKHMYDAAEKI 508
++ P + R++ E K K D EK+
Sbjct: 508 ELAPNVASYSYLIRVLCKERKLKEAEDLVEKM 539
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 154/331 (46%), Gaps = 4/331 (1%)
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFI 244
+ ++ F+E+ G + N LL + F E K + + ++F I I
Sbjct: 111 DSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKIKVVLDVYSFGIVI 170
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
G C+ ++++ + E++ G P V+ Y+T+I C++ K +L EM G
Sbjct: 171 KGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLV 230
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
N TYT ++ L K+G ++ + EKM+ G P+ +NC++ L + R ++A V
Sbjct: 231 ANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKV 290
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
+ EM E GV+ + T+NT+I +A V+++M K PN+ T++ L+
Sbjct: 291 FD-EMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQM-KSYVINPNLITYNTLIDGF 348
Query: 425 FKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
GK + LS D + LS + TY +++ G CR A + KEM I P
Sbjct: 349 CSVGKLGKALSLCRD--LKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKP 406
Query: 485 RYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
T +++D + + A ++ + M++L
Sbjct: 407 SKVTYTILIDTFARSDNMETAIQLRSSMEEL 437
>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 111/467 (23%), Positives = 211/467 (45%), Gaps = 55/467 (11%)
Query: 62 PRLPDIDVIIS---KVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLI--HRFKDDWKS 116
P +V+I+ + G EVF + + A+ P+H N +I H D ++
Sbjct: 13 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTE----RAVLPNHITYNTMIDGHIKGGDLEA 68
Query: 117 ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMR 176
+ R C G + ++ Y +++ L + +M + ALL+EM+ +V ++
Sbjct: 69 GFRL-RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSIL- 126
Query: 177 RFSGAGQWEDAVRTFDELGTF---GLEKNTETMNLLLDTLCKEGKVELAR---------- 223
F G + D+ G + G+ T ++LL+ LCK+GKV +A
Sbjct: 127 -FDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAG 185
Query: 224 -------------------------SVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQ 257
S F ++KS I P+ T+N I+G CK R+ AQ
Sbjct: 186 LVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQ 245
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
+ EM+ +G +P V +++T+I +Y R K + +L EMQ G PNVV+Y ++++
Sbjct: 246 DLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAF 305
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
K+G EA+ I + M P+++ +N +I +A ++ +M NG++P
Sbjct: 306 CKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQA-FILVEKMKSNGISPS 364
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
T+N +I + +A ++ ++ P+ +++ L+ +C G D+ L
Sbjct: 365 IVTYNLLIKGLCNQSQISEAEEIINSLSN-HRLIPDAVSYNTLISACCYRGNIDKALD-- 421
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
L ++K+ + + TY +I GL A + L+++M+ +++ P
Sbjct: 422 LQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVP 468
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 159/364 (43%), Gaps = 40/364 (10%)
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHT 239
AG+ DAV FDE+ + N T N ++D K G +E + ++ + PNA T
Sbjct: 28 AGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAIT 87
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISY------------------------ 275
+N+ + G C+ R+ E + EM P +Y
Sbjct: 88 YNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYL 147
Query: 276 -----------STIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
S ++ C+ S E+L + G P V Y T+++ ++G+ E
Sbjct: 148 KNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELE 207
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTM 384
A +MK KPD +N LI L +A R+ A + +EM +NGV P TFNT+
Sbjct: 208 GAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLL-MEMQDNGVNPTVETFNTL 266
Query: 385 ITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK 444
I + G EK F VL EM + KPNV ++ ++ + K GK E ++ +LDDM +K
Sbjct: 267 IDAYGRTGQLEKCFIVLSEMQE-NGLKPNVVSYGSIVNAFCKNGKIPEAVA-ILDDMFHK 324
Query: 445 HHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDA 504
L + Y +I + A++L ++M + I+P T L++ + +
Sbjct: 325 DVLP-NAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISE 383
Query: 505 AEKI 508
AE+I
Sbjct: 384 AEEI 387
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 160/335 (47%), Gaps = 18/335 (5%)
Query: 78 SSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEI- 136
S +EV QSL V + P+ + N LI+ + G A S G S I
Sbjct: 172 SIAEEVLQSL----VNAGLVPTRVIYNTLINGY-----CQTGELEGAFSTFGQMKSRHIK 222
Query: 137 -----YEMMVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDAVRT 190
Y +++ L K ++ + LL EM + T+ T ++ + GQ E
Sbjct: 223 PDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIV 282
Query: 191 FDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCK 249
E+ GL+ N + +++ CK GK+ A ++ ++ + PNA +N I + +
Sbjct: 283 LSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVE 342
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
D+A +++MK +G P +++Y+ +I+ C Q S+ E+++ + P+ V+
Sbjct: 343 HGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVS 402
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM 369
Y T++S G+ ++A+ + ++M G K R ++ LI LG A R+ E Y+YQ +M
Sbjct: 403 YNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQ-KM 461
Query: 370 PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
+N V P + N M+ +S +G+ KA + +EM
Sbjct: 462 MQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEM 496
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 114/261 (43%), Gaps = 4/261 (1%)
Query: 234 PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
PPNA ++N+ I G + R +A EM P I+Y+T+I + + + +
Sbjct: 12 PPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFR 71
Query: 294 LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLG 353
L D+M G PN +TY ++S L ++G E + ++M PD ++ L L
Sbjct: 72 LRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLS 131
Query: 354 RASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPN 413
R + + ++ + +NGV T + ++ G A VL+ + P
Sbjct: 132 RNGDSKAMLSLFGKYL-KNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVN-AGLVPT 189
Query: 414 VQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLL 473
++ L+ +TG+ + S + H+ D TY +I+GLC+A + A L
Sbjct: 190 RVIYNTLINGYCQTGELEGAFSTF--GQMKSRHIKPDHITYNALINGLCKAERITNAQDL 247
Query: 474 FKEMIGHDITPRYQTCRLILD 494
EM + + P +T ++D
Sbjct: 248 LMEMQDNGVNPTVETFNTLID 268
>gi|297850744|ref|XP_002893253.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
lyrata]
gi|297339095|gb|EFH69512.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
lyrata]
Length = 1147
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 176/364 (48%), Gaps = 7/364 (1%)
Query: 131 EHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVR 189
E S Y ++++ K +M++ R +M + G VT + ++ + G +++A
Sbjct: 306 EFSEVTYNILINGFSKSGKMEEARRFHGDMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWG 365
Query: 190 TFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCK 249
DE+ G+ T T N+ + LC+ G+++ AR + L S P+ ++N +HG+ K
Sbjct: 366 VTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDAREL---LSSMAAPDVVSYNTLMHGYIK 422
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
+ + EA ++K +P +++Y+T+I C N L +EM +Q P+V+T
Sbjct: 423 MRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVIT 482
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM 369
YTT++ K+G+ A I ++M G KPD + R ++A +++ +
Sbjct: 483 YTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMV 542
Query: 370 PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
E+ APD + +N I G+ EKA ++ ++ P+ T+ +++ + G+
Sbjct: 543 AEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRV-GLVPDHVTYTTVIRGYLEKGR 601
Query: 430 TDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTC 489
+ L D+M++K LS + TY ++IHG +A + E A+ EM + P T
Sbjct: 602 F-KMARDLYDEMLSK-RLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTH 659
Query: 490 RLIL 493
+L
Sbjct: 660 NALL 663
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 166/353 (47%), Gaps = 15/353 (4%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQWEDAVRTFD 192
+ M+D K ++++ + EM + +I VT N + + FS +G+ E+A R
Sbjct: 277 FNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNIL---INGFSKSGKMEEARRFHG 333
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKIN 251
++ G + N L++ CK+G + A V E L + I P T+NI+I C+
Sbjct: 334 DMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFG 393
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
R+D+A+ + M P V+SY+T++ Y + F + L D+++A P++VTY
Sbjct: 394 RIDDARELLSSMAA----PDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYN 449
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
T++ L +SG+ E A R+ E+M PD + L+ + + A +Y EM
Sbjct: 450 TLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYD-EMLR 508
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
G+ PD + T G EKAF + EEM +H P++ ++ + K G +
Sbjct: 509 KGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLE 568
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
+ + + + L D TYT VI G + + A L+ EM+ ++P
Sbjct: 569 KAIE--FQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSP 619
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 127/281 (45%), Gaps = 9/281 (3%)
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYEL 294
P+ NI + +++AQ + M HG P VI+++T++ S + + +V ++
Sbjct: 237 PSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVITFNTMLDSCFKAGDLERVDKI 296
Query: 295 LDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGR 354
EM+ + + VTY +++ +KSG EEA R M+ G FN LI +
Sbjct: 297 WLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSGFPVTPYSFNPLIEGYCK 356
Query: 355 ASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNV 414
EA V EM G+ P TST+N I G + A +L M P+V
Sbjct: 357 QGLFDEAWGVTD-EMLNAGIYPTTSTYNIYIRALCEFGRIDDARELLSSM-----AAPDV 410
Query: 415 QTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLF 474
+++ L+ K K E S L DD+ +++ I TY +I GLC + E A L
Sbjct: 411 VSYNTLMHGYIKMRKFVEA-SLLFDDL-KAGNINPSIVTYNTLIDGLCESGNLEGAQRLK 468
Query: 475 KEMIGHDITPRYQTCRLILDE-VKQKHMYDAAEKIEAVMKK 514
+EM I P T +L VK ++ A E + +++K
Sbjct: 469 EEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRK 509
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 86/178 (48%), Gaps = 8/178 (4%)
Query: 207 NLLLDTLCKEGKVELA----RSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQE 262
N+ +D LCK G +E A R +F + + P+ T+ I G+ + R A+ E
Sbjct: 555 NVRIDGLCKVGNLEKAIEFQRKIF---RVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDE 611
Query: 263 MKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGD 322
M P VI+Y +I + + + ++ EM+ +G PNV+T+ ++ + K+G+
Sbjct: 612 MLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGN 671
Query: 323 FEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTST 380
+EA R KM+ G P+ + LI + +E V +Y+ EM + + PD T
Sbjct: 672 IDEAYRYLCKMEEEGISPNKYSYTILISKHCDLDKWEEVVKLYK-EMLDKEIEPDGYT 728
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 104/213 (48%), Gaps = 9/213 (4%)
Query: 137 YEMMVDILGKVRQMDQMRA--LLEEM-SKGHIVTLNTIAKVMRRFSG---AGQWEDAVRT 190
Y +G++R D +A L EEM ++ H TI V R G G E A+
Sbjct: 516 YAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNV--RIDGLCKVGNLEKAIEF 573
Query: 191 FDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCK 249
++ GL + T ++ ++G+ ++AR ++ E+ S + P+ T+ + IHG K
Sbjct: 574 QRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAK 633
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
R+++A EMK G P V++++ ++ C+ N + Y L +M+ +G PN +
Sbjct: 634 AGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEEGISPNKYS 693
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDS 342
YT ++S +EE +++ ++M +PD
Sbjct: 694 YTILISKHCDLDKWEEVVKLYKEMLDKEIEPDG 726
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 89/186 (47%), Gaps = 2/186 (1%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
IY + +D L KV +++ ++ + G + T V+R + G+++ A +DE+
Sbjct: 553 IYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEM 612
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRV 253
+ L + T +L+ K G++E A E+K + PN T N +HG CK +
Sbjct: 613 LSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNI 672
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
DEA + +M+ G P SY+ +I +C + +V +L EM + P+ T+ +
Sbjct: 673 DEAYRYLCKMEEEGISPNKYSYTILISKHCDLDKWEEVVKLYKEMLDKEIEPDGYTHRAL 732
Query: 314 MSYLAK 319
+L K
Sbjct: 733 FKHLEK 738
>gi|356547476|ref|XP_003542138.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80880,
mitochondrial-like [Glycine max]
Length = 504
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 115/460 (25%), Positives = 203/460 (44%), Gaps = 31/460 (6%)
Query: 59 VDSPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSAL 118
+D P LP ++ KV S + E + Q + L+ I +++WK AL
Sbjct: 56 LDDPTLPKFLELLKKVAHSSPQAEGLH-------LSGFQANRDLICSAIWALREEWKPAL 108
Query: 119 GIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRF 178
F+W +C G + ++ +M+ +L + ++ +M + + T + ++ R+
Sbjct: 109 LAFKW--NCHG--NDEKVCNLMIWVLTTHGKFSTAWCIIRDMHRSSLSTRQAMLIMIDRY 164
Query: 179 SGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAH 238
+ A A++TF+ + F L + E + LL L K G VE A L K P N
Sbjct: 165 ASANNSAKAIQTFNFMDKFRLTPDQEAFHALLTALSKYGNVEEAEEFMLVNKKLFPLNTE 224
Query: 239 TFNIFIHGWCKINR-VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDE 297
+FNI ++GWC I + V EA+ +EM + P SYS +I + + N L D+
Sbjct: 225 SFNIILNGWCNITKDVYEAKRVWREMSKYCITPNATSYSYMISCFSNEGNLFDSLRLYDQ 284
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
M+ +G P + Y +++ L +EA+R +K+K G +P S FN +I L A +
Sbjct: 285 MKKRGWIPGIEIYNSLVYVLTHENCLKEALRTIDKLKEQGLQPGSATFNSMILPLCEAGK 344
Query: 358 VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTF 417
+ A ++ + EN V+P T T++ + G E L M K PN +F
Sbjct: 345 LAGARIIFNTMVEEN-VSPTTETYHAFFEGTDYQGTLE----FLTRM-KDSGLGPNKDSF 398
Query: 418 HPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEW---AYLLF 474
+L K + L + + + + Y +++ GL C W A +
Sbjct: 399 VIILAKFLKLKQPVNALKFWTE--MKTYDVLPSCVHYRIMVEGLV---TCRWFVKARDFY 453
Query: 475 KEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
+EM+ + + + RL QK + D+ +K + +KK
Sbjct: 454 EEMVSNGCSADPKLNRLF-----QKEVLDSGDKGKQNVKK 488
>gi|297832366|ref|XP_002884065.1| hypothetical protein ARALYDRAFT_343373 [Arabidopsis lyrata subsp.
lyrata]
gi|297329905|gb|EFH60324.1| hypothetical protein ARALYDRAFT_343373 [Arabidopsis lyrata subsp.
lyrata]
Length = 1056
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 178/411 (43%), Gaps = 45/411 (10%)
Query: 107 IHRFKDDWKSALG---IFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM--S 161
I R D KSA G FRWA + PG+ HS Y + L R+ D + LL+EM S
Sbjct: 34 IVRLILDQKSASGALETFRWASTFPGFIHSRSTYRALFYKLCVFRRFDTVYQLLDEMPES 93
Query: 162 KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVEL 221
G ++R F A + + D + FG++ + + N +LD L KE +++
Sbjct: 94 TGLPPDDAIFVTIIRGFGRARLTKRVISVVDLVSKFGIKPSLKVFNSILDVLVKE-DIDI 152
Query: 222 ARSVFLE--LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
AR F + S I + +T+ I + G C NR+ + +Q MK G P + Y+T++
Sbjct: 153 AREFFRRKMMASGIQGDEYTYGILMKGLCLTNRIGDGFKLLQIMKTCGVAPNTVVYNTLL 212
Query: 280 QSYCRQYNFSKVYELLDEMQ-------------------------------AQGCPPNVV 308
+ C+ + L+ EM+ + G P+VV
Sbjct: 213 HALCKNGKVGRARSLMSEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGLVPDVV 272
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
T T VM L G EA+ + E+++ G K D N L+ +++ A +Q E
Sbjct: 273 TVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCAVGKMRVAQRFFQ-E 331
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M G P+ T+N +I F G + A +M K + + N TF+ L++ G
Sbjct: 332 MERKGYLPNVETYNLLIAGFCDVGMLDSALDTFNDM-KTDAIRWNFATFNTLIRGLSVRG 390
Query: 429 KTDECLS--QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
+TD+ + +L+ D H +D Y VI+G + N+ E A +M
Sbjct: 391 RTDDGIKILELMQDSETVHGARID--PYNSVIYGFYKENRWEDALEFLLKM 439
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 99/438 (22%), Positives = 166/438 (37%), Gaps = 76/438 (17%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEE--MSKGHIVTLNTIAKVMRRFSGAGQWED 186
G + S +++ ++D+L K +D R M+ G T +M+ + D
Sbjct: 130 GIKPSLKVFNSILDVLVK-EDIDIAREFFRRKMMASGIQGDEYTYGILMKGLCLTNRIGD 188
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHG 246
+ + T G+ NT N LL LCK GKV ARS+ E+K PN TFNI I
Sbjct: 189 GFKLLQIMKTCGVAPNTVVYNTLLHALCKNGKVGRARSLMSEMKE---PNDVTFNILISA 245
Query: 247 WC----------------------------KI-------NRVDEAQWTIQEMKGHGCHPC 271
+C K+ RV EA ++ ++ G
Sbjct: 246 YCNEQKLIQSMVLLEKCFSLGLVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVD 305
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
V++ +T+++ YC EM+ +G PNV TY +++ G + A+
Sbjct: 306 VVACNTLVKGYCAVGKMRVAQRFFQEMERKGYLPNVETYNLLIAGFCDVGMLDSALDTFN 365
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV-APDTSTFNTMITMFSH 390
MK + + FN LI L R + + + ++ V +N++I F
Sbjct: 366 DMKTDAIRWNFATFNTLIRGLSVRGRTDDGIKILELMQDSETVHGARIDPYNSVIYGFYK 425
Query: 391 HGHHEKAFHVLEEMNKL--------------------------------EHCKPNVQTFH 418
E A L +M KL E P+V H
Sbjct: 426 ENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDVKTAYDQMTGEGGVPSVIVSH 485
Query: 419 PLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
L+ + G +E L +L++DMV + +L +T+ VI G C+ +K ++M
Sbjct: 486 CLIHRYSQEGYMEETL-ELINDMVTRGYLPRS-STFNAVIIGFCKEDKVMNGIKFVEDMA 543
Query: 479 GHDITPRYQTCRLILDEV 496
P ++ +L+E+
Sbjct: 544 ERGCVPDRESYNPLLEEL 561
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 100/486 (20%), Positives = 201/486 (41%), Gaps = 64/486 (13%)
Query: 49 ARLDHHQVLCVD-------SPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHY 101
ARL + VD P L + I+ V V D + ++ + + IQ Y
Sbjct: 113 ARLTKRVISVVDLVSKFGIKPSLKVFNSILD-VLVKEDIDIAREFFRRKMMASGIQGDEY 171
Query: 102 LVNKLI------HRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRA 155
L+ +R D +K L I + G P ++ +Y ++ L K ++ + R+
Sbjct: 172 TYGILMKGLCLTNRIGDGFK-LLQIMKTCGVAP----NTVVYNTLLHALCKNGKVGRARS 226
Query: 156 LLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK 215
L+ EM + + VT N + + + ++ ++ + GL + T+ +++ LC
Sbjct: 227 LMSEMKEPNDVTFNILISA---YCNEQKLIQSMVLLEKCFSLGLVPDVVTVTKVMEVLCN 283
Query: 216 EGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVIS 274
EG+V A V ++S + N + G+C + ++ AQ QEM+ G P V +
Sbjct: 284 EGRVSEALEVLERVESKGGKVDVVACNTLVKGYCAVGKMRVAQRFFQEMERKGYLPNVET 343
Query: 275 YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
Y+ +I +C + ++M+ N T+ T++ L+ G ++ I+I E M+
Sbjct: 344 YNLLIAGFCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSVRGRTDDGIKILELMQ 403
Query: 335 ----IVGSKPDSRFFNCLIYTLGRASRVQEAV-YVYQVE--------------------- 368
+ G++ D +N +IY + +R ++A+ ++ ++E
Sbjct: 404 DSETVHGARIDP--YNSVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGG 461
Query: 369 ----------MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFH 418
M G P + +I +S G+ E+ ++ +M + P TF+
Sbjct: 462 MDDVKTAYDQMTGEGGVPSVIVSHCLIHRYSQEGYMEETLELINDMVTRGYL-PRSSTFN 520
Query: 419 PLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
++ K K + + ++DM + + D +Y ++ LC + A+LL M+
Sbjct: 521 AVIIGFCKEDKVMNGI-KFVEDMAERGCVP-DRESYNPLLEELCVKGDIQKAWLLLSLMV 578
Query: 479 GHDITP 484
I P
Sbjct: 579 EKSIVP 584
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 148/362 (40%), Gaps = 24/362 (6%)
Query: 150 MDQMRA--LLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTF-GLEKNTETM 206
+ Q+R+ LL S HIV L ++ + S +G A+ TF TF G + T
Sbjct: 17 LPQLRSSSLLSVPSDDHIVRL-----ILDQKSASG----ALETFRWASTFPGFIHSRSTY 67
Query: 207 NLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
L LC + + + E+ + +PP+ F I G+ + + +
Sbjct: 68 RALFYKLCVFRRFDTVYQLLDEMPESTGLPPDDAIFVTIIRGFGRARLTKRVISVVDLVS 127
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLD-EMQAQGCPPNVVTYTTVMSYLAKSGDF 323
G P + +++I+ ++ + E +M A G + TY +M L +
Sbjct: 128 KFGIKPSLKVFNSILDVLVKE-DIDIAREFFRRKMMASGIQGDEYTYGILMKGLCLTNRI 186
Query: 324 EEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNT 383
+ ++ + MK G P++ +N L++ L + +V A + EM E P+ TFN
Sbjct: 187 GDGFKLLQIMKTCGVAPNTVVYNTLLHALCKNGKVGRARSLMS-EMKE----PNDVTFNI 241
Query: 384 MITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVN 443
+I+ + + ++ +LE+ L P+V T +++ G+ E L L + V
Sbjct: 242 LISAYCNEQKLIQSMVLLEKCFSL-GLVPDVVTVTKVMEVLCNEGRVSEALEVL--ERVE 298
Query: 444 KHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYD 503
+D+ ++ G C K A F+EM P +T L++ M D
Sbjct: 299 SKGGKVDVVACNTLVKGYCAVGKMRVAQRFFQEMERKGYLPNVETYNLLIAGFCDVGMLD 358
Query: 504 AA 505
+A
Sbjct: 359 SA 360
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 83/379 (21%), Positives = 153/379 (40%), Gaps = 52/379 (13%)
Query: 41 IESYCSDGARLDHHQVL---CVDSPRLPDIDVIISKVHVGSSEDEVFQSL---------- 87
I +YC++ +L VL C +PD+ + + V +E V ++L
Sbjct: 243 ISAYCNE-QKLIQSMVLLEKCFSLGLVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKG 301
Query: 88 -KQDHV-CNAIQPSHYLVNKL--IHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDI 143
K D V CN + + V K+ RF + + GY + E Y +++
Sbjct: 302 GKVDVVACNTLVKGYCAVGKMRVAQRFFQEMERK-----------GYLPNVETYNLLIAG 350
Query: 144 LGKVRQMDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGL 199
V +D +M I T NT+ +R S G+ +D ++ + L
Sbjct: 351 FCDVGMLDSALDTFNDMKTDAIRWNFATFNTL---IRGLSVRGRTDDGIKILE------L 401
Query: 200 EKNTETM--------NLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKIN 251
+++ET+ N ++ KE + E A L+++ P A + + C+
Sbjct: 402 MQDSETVHGARIDPYNSVIYGFYKENRWEDALEFLLKMEKLFP-RAVDRSFKLISLCEKG 460
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
+D+ + +M G G P VI +I Y ++ + EL+++M +G P T+
Sbjct: 461 GMDDVKTAYDQMTGEGGVPSVIVSHCLIHRYSQEGYMEETLELINDMVTRGYLPRSSTFN 520
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
V+ K I+ E M G PD +N L+ L +Q+A + + M E
Sbjct: 521 AVIIGFCKEDKVMNGIKFVEDMAERGCVPDRESYNPLLEELCVKGDIQKAWLLLSL-MVE 579
Query: 372 NGVAPDTSTFNTMITMFSH 390
+ PD+S +++++ S
Sbjct: 580 KSIVPDSSMWSSLMFCLSQ 598
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/219 (17%), Positives = 98/219 (44%), Gaps = 3/219 (1%)
Query: 141 VDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLE 200
+ + G+ ++ L+++ H ++ V+ F +WEDA+ ++
Sbjct: 386 LSVRGRTDDGIKILELMQDSETVHGARIDPYNSVIYGFYKENRWEDALEFLLKMEKLFPR 445
Query: 201 KNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWT 259
+ L+ +LC++G ++ ++ + ++ P+ + IH + + ++E
Sbjct: 446 AVDRSFKLI--SLCEKGGMDDVKTAYDQMTGEGGVPSVIVSHCLIHRYSQEGYMEETLEL 503
Query: 260 IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK 319
I +M G P +++ +I +C++ + +++M +GC P+ +Y ++ L
Sbjct: 504 INDMVTRGYLPRSSTFNAVIIGFCKEDKVMNGIKFVEDMAERGCVPDRESYNPLLEELCV 563
Query: 320 SGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRV 358
GD ++A + M PDS ++ L++ L + + +
Sbjct: 564 KGDIQKAWLLLSLMVEKSIVPDSSMWSSLMFCLSQKTAI 602
>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
Length = 683
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 187/386 (48%), Gaps = 18/386 (4%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ L K + +D+ +L M K G + T ++ F +GQ ++A+ ++
Sbjct: 126 YNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMR 185
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
+ G+E + T N L+D LCK G+ AR +F + K + P T+ + G+ +
Sbjct: 186 SDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALV 245
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
E + M +G HP +S ++ +Y +Q + + +M+ QG PN VTY V+
Sbjct: 246 EMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVI 305
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL---GRASRVQEAVYVYQVEMPE 371
L KSG E+A+ E+M G P + +N LI+ L + R +E + +EM +
Sbjct: 306 GILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELI----LEMLD 361
Query: 372 NGVAPDTSTFNTMITMFSHHGH---HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
G+ +T FN++I G EK F ++ + KP++ T+ L+ G
Sbjct: 362 RGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG----VKPDIITYSTLIDGYCLAG 417
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
K DE ++LL MV+ + D TY+ +I+G C+ ++ + A +LF+EM ++P T
Sbjct: 418 KMDEA-TKLLASMVSVG-MKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIIT 475
Query: 489 CRLILDEVKQKHMYDAAEKIEAVMKK 514
+IL + Q AA+++ + K
Sbjct: 476 YNIILQGLFQTRRTAAAKELYVGITK 501
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/452 (23%), Positives = 207/452 (45%), Gaps = 10/452 (2%)
Query: 61 SPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSAL 118
SP + + II+ + + D+ + L V + + P N ++H F K A+
Sbjct: 120 SPNVVTYNSIIAALCKAQTVDKAMEVLTT-MVKSGVMPDCMTYNSIVHGFCSSGQPKEAI 178
Query: 119 GIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRR 177
+F G E Y ++D L K + + R + + M+K G + T +++
Sbjct: 179 -VFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQG 237
Query: 178 FSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPN 236
++ G + D + G+ N ++L+ K+ KVE A VF +++ + PN
Sbjct: 238 YATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPN 297
Query: 237 AHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLD 296
A T+ I CK RV++A ++M G P I Y+++I C + + EL+
Sbjct: 298 AVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELIL 357
Query: 297 EMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRAS 356
EM +G N + + +++ K G E+ ++ + M +G KPD ++ LI A
Sbjct: 358 EMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAG 417
Query: 357 RVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQT 416
++ EA + M G+ PD T++T+I + + A + EM P++ T
Sbjct: 418 KMDEATKLL-ASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMES-SGVSPDIIT 475
Query: 417 FHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKE 476
++ +L+ F+T +T ++ L + K L+++TY +++HGLC+ + A +F+
Sbjct: 476 YNIILQGLFQTRRT--AAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQN 533
Query: 477 MIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+ D+ +T +++D + + D A+ +
Sbjct: 534 LCLMDLKLEARTFNIMIDALLKVGRNDEAKDL 565
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 153/304 (50%), Gaps = 10/304 (3%)
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK----VELARSVFLELKSCIPPNAHTF 240
EDA FDEL G+ + + N+LL+ LC E + +EL + + C PP+ ++
Sbjct: 34 EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDC-PPDVVSY 91
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
+ I+G+ K +D+ T EM P V++Y++II + C+ K E+L M
Sbjct: 92 STVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVK 151
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
G P+ +TY +++ SG +EAI +KM+ G +PD +N L+ L + R E
Sbjct: 152 SGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTE 211
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
A ++ M + G+ P+ +T+ T++ ++ G + +L+ M + PN F L
Sbjct: 212 ARKIFD-SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR-NGIHPNHYVFSIL 269
Query: 421 LKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH 480
+ + K K +E + L+ + + L+ + TY VI LC++ + E A L F++MI
Sbjct: 270 VCAYAKQEKVEEAM--LVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDE 327
Query: 481 DITP 484
++P
Sbjct: 328 GLSP 331
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 153/347 (44%), Gaps = 36/347 (10%)
Query: 172 AKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-K 230
+ V+ F G + T++E+ + N T N ++ LCK V+ A V + K
Sbjct: 92 STVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVK 151
Query: 231 SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSK 290
S + P+ T+N +HG+C + EA +++M+ G P V++Y++++ C+ ++
Sbjct: 152 SGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTE 211
Query: 291 VYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIY 350
++ D M +G P + TY T++ A G E + + M G P+ F+ L+
Sbjct: 212 ARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVC 271
Query: 351 TLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHC 410
+ +V+EA+ V+ +M + G+ P+ T+ +I + G E A E+M E
Sbjct: 272 AYAKQEKVEEAMLVFS-KMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMID-EGL 329
Query: 411 KPNVQTFHPL---LKSCFKTGKTDECLSQLLD---------------------------- 439
P ++ L L +C K + +E + ++LD
Sbjct: 330 SPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEK 389
Query: 440 --DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
D++ + + DI TY+ +I G C A K + A L M+ + P
Sbjct: 390 LFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKP 436
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 82/176 (46%), Gaps = 4/176 (2%)
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG-VAPDTSTFNTMITMFSHHGHHEKAF 398
PD +N L+ L +R QEA+ + + + G PD +++T+I F G +K +
Sbjct: 49 PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKTY 108
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
EM + PNV T++ ++ + K D+ + ++L MV K + D TY ++
Sbjct: 109 STYNEMLD-QRISPNVVTYNSIIAALCKAQTVDKAM-EVLTTMV-KSGVMPDCMTYNSIV 165
Query: 459 HGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
HG C + + + A + K+M + P T ++D + + A KI M K
Sbjct: 166 HGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTK 221
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 108/261 (41%), Gaps = 3/261 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++D +MD+ LL M S G T + ++ + + +DA+ F E+
Sbjct: 406 YSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREME 465
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
+ G+ + T N++L L + + A+ +++ + KS T+NI +HG CK D
Sbjct: 466 SSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTD 525
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
+A Q + +++ +I + + + +L + G PN TY +
Sbjct: 526 DALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMA 585
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
+ G EE ++ M+ G DS N ++ L + + A Y + E
Sbjct: 586 ENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA-GTYLSMIDEKHF 644
Query: 375 APDTSTFNTMITMFSHHGHHE 395
+ + ST + I + S + E
Sbjct: 645 SLEASTASLFIDLLSGGKYQE 665
Score = 38.9 bits (89), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 52/120 (43%), Gaps = 2/120 (1%)
Query: 395 EKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTY 454
E A HV +E+ L P+V +++ LL ++ E L L + D+ +Y
Sbjct: 34 EDARHVFDEL--LRRGIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSY 91
Query: 455 TLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
+ VI+G + + Y + EM+ I+P T I+ + + D A ++ M K
Sbjct: 92 STVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVK 151
>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
Length = 798
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 191/417 (45%), Gaps = 41/417 (9%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G+ Y ++D L K + M++ A+L+ M KG + T ++R + GQ E+A
Sbjct: 233 GFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEA 292
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--------------------- 226
VR ++ GL+ + T LL+ CK G+ ARSVF
Sbjct: 293 VRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHG 352
Query: 227 ---------------LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPC 271
L ++ IP FNI I + K VD+A EM+ +G P
Sbjct: 353 YATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPD 412
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
V+SYST+I C+ ++M ++G PN++++T+++ L G++++ +
Sbjct: 413 VVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAF 472
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHH 391
+M G PD+ F N ++ L + RV EA + + + GV P+ ++NT+I +
Sbjct: 473 EMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVI-HIGVKPNVVSYNTLIDGYCFV 531
Query: 392 GHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDI 451
G +++ + M + +P+ T++ LL FK G+ ++ L+ L +M K I
Sbjct: 532 GKMDESIKQFDRMVSI-GLRPDSWTYNALLNGYFKNGRVEDALA-LYREMFRKDVKFCAI 589
Query: 452 TTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
T+ +++HGL +A + A L+ +M+ R +T +L + + D A ++
Sbjct: 590 TS-NIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRM 645
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 155/329 (47%), Gaps = 22/329 (6%)
Query: 166 VTLNTIAKVMRRFSGAGQWEDAV-RTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARS 224
VTLN ++++ + +DA+ F + G + + N L+ LC E K + A
Sbjct: 130 VTLN---QLIKGLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALE 186
Query: 225 VFLELKS-----CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
+ L + + C PN +++ I G+ K VD+A + EM G G P V++YS++I
Sbjct: 187 LLLHMTADGGYNC-SPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLI 245
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
C+ +K +L M +G PN TY ++ G EEA+R+ +KM G +
Sbjct: 246 DGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQ 305
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
PD + LI + R EA V+ M G P+++ ++ ++ ++ G
Sbjct: 306 PDVVTYILLIQYYCKIGRCAEARSVFD-SMVRKGQKPNSTIYHILLHGYATKGALIDVRD 364
Query: 400 VLEEMNK----LEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYT 455
+L+ M + EH + F+ L+ + K G D+ ++ + + ++ L D+ +Y+
Sbjct: 365 LLDLMIRDGIPFEH-----RAFNILICAYAKHGAVDKAMTAFTE--MRQNGLRPDVVSYS 417
Query: 456 LVIHGLCRANKCEWAYLLFKEMIGHDITP 484
VIH LC+ + E A F +M+ ++P
Sbjct: 418 TVIHILCKIGRVEDAVYHFNQMVSEGLSP 446
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 159/334 (47%), Gaps = 5/334 (1%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTF 240
G + A+ F E+ GL + + + ++ LCK G+VE A F ++ S + PN +F
Sbjct: 392 GAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISF 451
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
IHG C I + + EM G HP I +TI+ + C++ + + D +
Sbjct: 452 TSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIH 511
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
G PNVV+Y T++ G +E+I+ ++M +G +PDS +N L+ + RV++
Sbjct: 512 IGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVED 571
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
A+ +Y+ EM V T N ++ G A + +M + ++T++ +
Sbjct: 572 ALALYR-EMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVD-RGTQLRIETYNTV 629
Query: 421 LKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH 480
L + DE L ++ +D+ +K LD+ T+ +VI+ L + + + A LF M+
Sbjct: 630 LGGLCENSCVDEAL-RMFEDLRSK-EFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLR 687
Query: 481 DITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
P T L++ ++ + + ++ + M+K
Sbjct: 688 GPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEK 721
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 121/271 (44%), Gaps = 40/271 (14%)
Query: 162 KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVEL 221
K ++V+ NT+ + + G+ +++++ FD + + GL ++ T N LL+ K G+VE
Sbjct: 515 KPNVVSYNTL---IDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVED 571
Query: 222 ARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQ 280
A +++ E+ + + A T NI +HG + R+ A+ +M G + +Y+T++
Sbjct: 572 ALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLG 631
Query: 281 SYC---------RQYN--FSKVYEL-----------------LDE-------MQAQGCPP 305
C R + SK +EL +DE M +G P
Sbjct: 632 GLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVP 691
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
+V+TY+ ++ + G EE+ + M+ G DS N +I L V+ A Y
Sbjct: 692 HVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVIIRRLLEKGDVRRA-GTY 750
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEK 396
++ E + + ST +I + S + ++
Sbjct: 751 LTKIDEKNFSVEASTAALLIPIVSEKKYQKE 781
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 8/203 (3%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQW 184
G S Y +++ K +++ AL EM + + +T N I + AG+
Sbjct: 548 GLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNII---LHGLFQAGRI 604
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIF 243
A + ++ G + ET N +L LC+ V+ A +F +L+S + TFNI
Sbjct: 605 VAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIV 664
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
I+ K+ R+DEA+ M G P VI+YS +I+S + + +L M+ GC
Sbjct: 665 INALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGC 724
Query: 304 PPNVVTYTTVMSYLAKSGDFEEA 326
+ ++ L + GD A
Sbjct: 725 AADSHMLNVIIRRLLEKGDVRRA 747
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 2/110 (1%)
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK-HHLSLDITTYTLVI 458
V M +L + P+V +++ L+K K+ E L LL + ++ S ++ +Y+ +I
Sbjct: 152 VFRRMPELGYT-PDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTII 210
Query: 459 HGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
G + + + AY LF EMIG P T ++D + + + AE I
Sbjct: 211 DGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAI 260
>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 181/370 (48%), Gaps = 12/370 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++++ +D+ LL+EM S+G T V+ G + A +
Sbjct: 219 YTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRIS 278
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRV 253
G T N+LL L EGK E + ++ K C PN T++ I C+ ++
Sbjct: 279 KNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGC-EPNPITYSTLITALCRDGKI 337
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
DEA+ ++ MK P SY +I + CR+ E LD+M + G P++++Y ++
Sbjct: 338 DEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSI 397
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
++ L K+G+ +EA+ I EK+ VG P++ +N L L + A+ + +EM NG
Sbjct: 398 LASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMI-LEMLSNG 456
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
+ PD T+N++I+ G ++A +L +M + E C+P V +++ +L K + +
Sbjct: 457 IDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDA 516
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLC----RANKCEWAYLLFK-EMIGHDITPRYQT 488
+ ++L MVN+ L + TTYTL+I G+ R + E A LL + I D R+Q
Sbjct: 517 I-EVLAAMVNEGCLP-NETTYTLLIQGIGFAGWRYDAMELANLLVNMDAISEDSFKRFQK 574
Query: 489 CRLILDEVKQ 498
+ D K+
Sbjct: 575 IFPVFDAHKE 584
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 154/336 (45%), Gaps = 4/336 (1%)
Query: 173 KVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC 232
K + R + ++++++ + G + + L+ K+E A V L+
Sbjct: 82 KTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKH 141
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
P+ +N I G+CK +RVD A + MK G P V++Y+ +I ++C +
Sbjct: 142 GKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLAL 201
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
++D++ C P V+TYT ++ G +EA+++ ++M G +PD +N ++ +
Sbjct: 202 RVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGM 261
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
+ + A + + + +NG ST+N ++ + G E ++ +M ++ C+P
Sbjct: 262 CKEGMLDRA-FEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDM-LVKGCEP 319
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
N T+ L+ + + GK DE + L ++ + L+ D +Y +I LCR K + A
Sbjct: 320 NPITYSTLITALCRDGKIDEAKNVL--KVMKEKALAPDGYSYDPLISALCREGKVDLAIE 377
Query: 473 LFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+MI P + IL + + D A I
Sbjct: 378 FLDDMISGGHLPDILSYNSILASLCKNGNADEALNI 413
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 114/230 (49%), Gaps = 5/230 (2%)
Query: 283 CRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDS 342
C+ + + L M +G P+V+ T ++ E+AI++ E ++ G KPD
Sbjct: 88 CKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHG-KPDV 146
Query: 343 RFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLE 402
+N +I +A RV A V M + G PD T+N +I F G + A V++
Sbjct: 147 FAYNAVISGFCKADRVDHASKVLD-RMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMD 205
Query: 403 EMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC 462
++ K ++CKP V T+ L+++ G DE + +LLD+M+++ L D TY +V++G+C
Sbjct: 206 QLLK-DNCKPTVITYTILIEATITQGGIDEAM-KLLDEMLSRG-LRPDRYTYNVVVNGMC 262
Query: 463 RANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
+ + A+ + + T ++L ++ + ++ EK+ + M
Sbjct: 263 KEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDM 312
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 176/347 (50%), Gaps = 10/347 (2%)
Query: 164 HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELAR 223
++VT NT+ + + + ++A +G GLE N T N++++ LC++G+++
Sbjct: 17 NVVTYNTM---IDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETS 73
Query: 224 SVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSY 282
V +E+ + P+ T+N ++G+CK +A EM +G P V++Y+++I S
Sbjct: 74 EVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSM 133
Query: 283 CRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDS 342
C+ N ++ E D+M +G PN TYTT+++ A+ G +EA R+ +M G P
Sbjct: 134 CKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSI 193
Query: 343 RFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLE 402
+N LI R++EA+ + Q +M GV PD +++T+I+ F+ + ++AF +
Sbjct: 194 VTYNALINGHCVLGRMEEAIGLLQ-DMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKV 252
Query: 403 EMNKLEHCKPNVQTFHPLLKS-CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGL 461
EM + P+ T+ L++ C + T+ C + +M+ L D TYT +I+
Sbjct: 253 EMIG-KSVLPDAVTYSSLIQGLCEQRRLTEAC--DMFQEMLTI-KLPPDEFTYTTLINAY 308
Query: 462 CRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
C+ A L EMI P T ++++ + ++ A ++
Sbjct: 309 CKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRL 355
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 111/430 (25%), Positives = 201/430 (46%), Gaps = 39/430 (9%)
Query: 81 DEVFQSLKQDHVCNAIQPSHYLVNKLIH------RFKDDWKSALGIFRWAGSCPGYEHSS 134
DE F L+ + ++P+ N +I+ R K+ + + + R GY
Sbjct: 35 DEAFGFLRSMGL-KGLEPNLITFNMIINGLCRDGRLKETSEVLVEMSR-----KGYVPDE 88
Query: 135 EIYEMMVDILGKVRQMDQMRALLEEMSKG----HIVTLNTIAKVMRRFSGAGQWEDAVRT 190
Y +V+ K Q L EM + ++VT ++ M + AG A+
Sbjct: 89 VTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCK---AGNLNRAMEF 145
Query: 191 FDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCK 249
FD++ GL N T +++ ++G ++ A V E+ +S P+ T+N I+G C
Sbjct: 146 FDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCV 205
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
+ R++EA +Q+M G G P V+SYSTII + R + +++ EM + P+ VT
Sbjct: 206 LGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVT 265
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM 369
Y++++ L + EA + ++M + PD + LI + + +A++++ EM
Sbjct: 266 YSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHD-EM 324
Query: 370 PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC----F 425
+ G PD T+N +I + ++A +L ++ + P+ T++ L+++C F
Sbjct: 325 IQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKL-FYDDSIPSAVTYNTLIENCCNIEF 383
Query: 426 KT-----------GKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLF 474
K+ G DE Q+ + M+NK+H + Y ++IHG CR AY L+
Sbjct: 384 KSAVALVKGFCMKGLMDEA-DQVFESMINKNH-KPNEAIYNVIIHGHCRIGNVLKAYKLY 441
Query: 475 KEMIGHDITP 484
KEM+ D P
Sbjct: 442 KEMVHVDFVP 451
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 148/300 (49%), Gaps = 7/300 (2%)
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFI 244
+R F E+ G N T N ++D CK + + A + LK + PN TFN+ I
Sbjct: 2 GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKG-LEPNLITFNMII 60
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
+G C+ R+ E + EM G P ++Y+T++ YC++ NF + L EM G
Sbjct: 61 NGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLS 120
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
PNVVTYT++++ + K+G+ A+ ++M + G P+ R + +I + + EA V
Sbjct: 121 PNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRV 180
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
EM +G P T+N +I G E+A +L++M + P+V ++ ++
Sbjct: 181 LN-EMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVG-KGVLPDVVSYSTIISGF 238
Query: 425 FKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
+ + D Q+ +M+ K L D TY+ +I GLC + A +F+EM+ + P
Sbjct: 239 ARNQELDRAF-QMKVEMIGKSVLP-DAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPP 296
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 123/252 (48%), Gaps = 4/252 (1%)
Query: 261 QEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKS 320
+EM+ +GC P V++Y+T+I YC+ + + L M +G PN++T+ +++ L +
Sbjct: 7 KEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRD 66
Query: 321 GDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTST 380
G +E + +M G PD +N L+ + +A+ V EM NG++P+ T
Sbjct: 67 GRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQAL-VLHAEMVRNGLSPNVVT 125
Query: 381 FNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDD 440
+ ++I G+ +A ++M+ C PN +T+ ++ + G DE ++L++
Sbjct: 126 YTSLINSMCKAGNLNRAMEFFDQMHVRGLC-PNERTYTTIINGFAQQGLLDEAY-RVLNE 183
Query: 441 MVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKH 500
M + I TY +I+G C + E A L ++M+G + P + I+ +
Sbjct: 184 MTRSGFIP-SIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQ 242
Query: 501 MYDAAEKIEAVM 512
D A +++ M
Sbjct: 243 ELDRAFQMKVEM 254
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 93/232 (40%), Gaps = 27/232 (11%)
Query: 170 TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL 229
T ++ + G A+ DE+ G + T N+L++ L K+ + + AR + L+L
Sbjct: 300 TYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKL 359
Query: 230 --KSCIPPNAHTFNIFIH---------------GWCKINRVDEAQWTIQEMKGHGCHPCV 272
IP +A T+N I G+C +DEA + M P
Sbjct: 360 FYDDSIP-SAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNE 418
Query: 273 ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL---AKSGDFEEAI-R 328
Y+ II +CR N K Y+L EM P+ VT ++ L G+ E I
Sbjct: 419 AIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELNEVIGD 478
Query: 329 ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTST 380
I K+ D+ L+ + + + V+ EM ++G+ P T T
Sbjct: 479 ILRSCKLT----DAELSKVLV-EINQKEGNMDMVFNLLTEMAKDGLIPSTGT 525
>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/431 (24%), Positives = 201/431 (46%), Gaps = 14/431 (3%)
Query: 88 KQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHS--SEIYEMMVDILG 145
K H ++ YL+ +L +R +W+ AL + W G+ S S++ +M+ LG
Sbjct: 154 KWSHQLVGLEDFPYLLRELGNR--GEWERALQGYEWM-VQQGHLRSEWSKLASIMISTLG 210
Query: 146 KVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTE 204
++ +++ + K G + + ++ + +G+ +A++ F + G + N
Sbjct: 211 RLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLI 270
Query: 205 TMNLLLDTLCKEGKVELARS--VFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQ 261
T N ++D C +G V+L ++ +F E+ K + P+ TFN I + + +++Q
Sbjct: 271 TYNTIIDA-CGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFA 329
Query: 262 EMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSG 321
EM+ G + +Y+T+I + C+ ++ M+ + PNVVTY+T++ K G
Sbjct: 330 EMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLG 389
Query: 322 DFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTF 381
FEEAI + MK G +PD +N LI + R +A+ + +M G+ D T+
Sbjct: 390 CFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACK-DMERVGLKADVVTY 448
Query: 382 NTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDM 441
N +I + G ++ A + ++M K E PNV T+ L+ + K G + S ++
Sbjct: 449 NALIDAYGKQGKYKDAAGLFDKM-KAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVE-- 505
Query: 442 VNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHM 501
+ L D+ Y+ +I C+ E A +L +EM I P T ++D +
Sbjct: 506 FKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRNGQ 565
Query: 502 YDAAEKIEAVM 512
D E + M
Sbjct: 566 VDNVEAAKGNM 576
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 185/388 (47%), Gaps = 8/388 (2%)
Query: 131 EHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRT 190
+HS E +IL ALL E +V L ++R G+WE A++
Sbjct: 125 KHSPEADMAAQEILSAPSMSGNSTALLLEKWSHQLVGLEDFPYLLRELGNRGEWERALQG 184
Query: 191 FDELGTFGLEKN--TETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGW 247
++ + G ++ ++ ++++ TL + GKVE+A VF K+ N + ++ + +
Sbjct: 185 YEWMVQQGHLRSEWSKLASIMISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAY 244
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCR-QYNFSKVYELLDEMQAQGCPPN 306
+ R EA Q MK GC P +I+Y+TII + + + K ++ +EMQ +G P+
Sbjct: 245 GRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKKALDIFEEMQKEGVEPD 304
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
+T+ ++++ ++ +E++ R+ +M+ G + D +N LI + + +++ A +
Sbjct: 305 RITFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMS 364
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
M ++P+ T++TMI + G E+A + +M K +P+ +++ L+ K
Sbjct: 365 -SMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDM-KESGVRPDRVSYNTLIDIYAK 422
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
G+ D+ L+ D + + L D+ TY +I + K + A LF +M + P
Sbjct: 423 LGRFDDALTACKD--MERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNV 480
Query: 487 QTCRLILDEVKQKHMYDAAEKIEAVMKK 514
T ++D + M+ A I K+
Sbjct: 481 LTYSALIDAYSKAGMHQDATSIFVEFKR 508
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 146/322 (45%), Gaps = 12/322 (3%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDA 187
G E Y ++D + K QM+ +++ M +I + T + ++ + G +E+A
Sbjct: 335 GIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEA 394
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHG 246
+ + ++ G+ + + N L+D K G+ + A + +++ + + T+N I
Sbjct: 395 IGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDA 454
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
+ K + +A +MK G P V++YS +I +Y + + E + G P+
Sbjct: 455 YGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPD 514
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
VV Y++++ K G E+A+ + ++M G +P+ +N LI GR +V + V +
Sbjct: 515 VVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRNGQV-DNVEAAK 573
Query: 367 VEMPEN--GVAPDTSTFNTMITMFSHHGHHE-----KAFHVLEEMNKLEHCKPNVQTFHP 419
MP N D ST T+ S ++ A V EM + KPNV TF
Sbjct: 574 GNMPINVFNKVGDRSTEIICKTLTSQQNANDHTGVLAAVSVFHEMQQF-GLKPNVVTFSA 632
Query: 420 LLKSCFKTGKTDECLSQLLDDM 441
+L +C + E S LL+ M
Sbjct: 633 ILNACSRCSSLQEA-SVLLEQM 653
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 135/318 (42%), Gaps = 65/318 (20%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++DI K+ + D ++M K +VT N + + + G+++DA FD
Sbjct: 413 YNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNAL---IDAYGKQGKYKDAAGLFD 469
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKIN 251
++ GL N T + L+D K G + A S+F+E K + + P+ ++ I CK
Sbjct: 470 KMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCCKCG 529
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYN---------------FSKVYE--- 293
V++A +QEM G P +++Y+++I +Y R F+KV +
Sbjct: 530 LVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRNGQVDNVEAAKGNMPINVFNKVGDRST 589
Query: 294 ------------------------LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI 329
+ EMQ G PNVVT++ +++ ++ +EA +
Sbjct: 590 EIICKTLTSQQNANDHTGVLAAVSVFHEMQQFGLKPNVVTFSAILNACSRCSSLQEASVL 649
Query: 330 TEKMKIVGSKPDSRFFNCLIYTL--GRASRVQEAVYVYQV----EMPENGVAPDTSTFNT 383
E+M RFF+ +Y + G ++E V+V E+ A + +N
Sbjct: 650 LEQM---------RFFDSWVYGIAHGLLMGLREHVWVEAQRLFDEIARMDYATGAAFYNA 700
Query: 384 MITMFSHHGHHEKAFHVL 401
+ + H G + A V+
Sbjct: 701 LTDVLWHFGQRQGAQEVV 718
>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
Length = 554
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 111/467 (23%), Positives = 211/467 (45%), Gaps = 55/467 (11%)
Query: 62 PRLPDIDVIIS---KVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLI--HRFKDDWKS 116
P +V+I+ + G EVF + + A+ P+H N +I H D ++
Sbjct: 61 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTE----RAVLPNHITYNTMIDGHIKGGDLEA 116
Query: 117 ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMR 176
+ R C G + ++ Y +++ L + +M + ALL+EM+ +V ++
Sbjct: 117 GFRL-RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSIL- 174
Query: 177 RFSGAGQWEDAVRTFDELGTF---GLEKNTETMNLLLDTLCKEGKVELAR---------- 223
F G + D+ G + G+ T ++LL+ LCK+GKV +A
Sbjct: 175 -FDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAG 233
Query: 224 -------------------------SVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQ 257
S F ++KS I P+ T+N I+G CK R+ AQ
Sbjct: 234 LVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQ 293
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
+ EM+ +G +P V +++T+I +Y R K + +L EMQ G PNVV+Y ++++
Sbjct: 294 DLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAF 353
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
K+G EA+ I + M P+++ +N +I +A ++ +M NG++P
Sbjct: 354 CKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQA-FILVEKMKSNGISPS 412
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
T+N +I + +A ++ ++ P+ +++ L+ +C G D+ L
Sbjct: 413 IVTYNLLIKGLCNQSQISEAEEIINSLSN-HRLIPDAVSYNTLISACCYRGNIDKALD-- 469
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
L ++K+ + + TY +I GL A + L+++M+ +++ P
Sbjct: 470 LQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVP 516
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 111/437 (25%), Positives = 183/437 (41%), Gaps = 52/437 (11%)
Query: 113 DWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKG-----HIVT 167
D + A GI AG+ P + + V + + +L M + + +
Sbjct: 10 DVRRAFGILASAGARP----DTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFS 65
Query: 168 LNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFL 227
N + M R AG+ DAV FDE+ + N T N ++D K G +E +
Sbjct: 66 YNVVIAGMWR---AGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRD 122
Query: 228 ELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISY----------- 275
++ + PNA T+N+ + G C+ R+ E + EM P +Y
Sbjct: 123 QMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNG 182
Query: 276 ------------------------STIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
S ++ C+ S E+L + G P V Y
Sbjct: 183 DSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYN 242
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
T+++ ++G+ E A +MK KPD +N LI L +A R+ A + +EM +
Sbjct: 243 TLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLL-MEMQD 301
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
NGV P TFNT+I + G EK F VL EM + KPNV ++ ++ + K GK
Sbjct: 302 NGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQE-NGLKPNVVSYGSIVNAFCKNGKIP 360
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRL 491
E ++ +LDDM +K L + Y +I + A++L ++M + I+P T L
Sbjct: 361 EAVA-ILDDMFHKDVLP-NAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNL 418
Query: 492 ILDEVKQKHMYDAAEKI 508
++ + + AE+I
Sbjct: 419 LIKGLCNQSQISEAEEI 435
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 160/335 (47%), Gaps = 18/335 (5%)
Query: 78 SSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEI- 136
S +EV QSL V + P+ + N LI+ + G A S G S I
Sbjct: 220 SIAEEVLQSL----VNAGLVPTRVIYNTLINGY-----CQTGELEGAFSTFGQMKSRHIK 270
Query: 137 -----YEMMVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDAVRT 190
Y +++ L K ++ + LL EM + T+ T ++ + GQ E
Sbjct: 271 PDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIV 330
Query: 191 FDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCK 249
E+ GL+ N + +++ CK GK+ A ++ ++ + PNA +N I + +
Sbjct: 331 LSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVE 390
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
D+A +++MK +G P +++Y+ +I+ C Q S+ E+++ + P+ V+
Sbjct: 391 HGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVS 450
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM 369
Y T++S G+ ++A+ + ++M G K R ++ LI LG A R+ E Y+YQ +M
Sbjct: 451 YNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQ-KM 509
Query: 370 PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
+N V P + N M+ +S +G+ KA + +EM
Sbjct: 510 MQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEM 544
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 131/315 (41%), Gaps = 6/315 (1%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHT 239
G+ D R F L + G +T N + G + A + + PPNA +
Sbjct: 6 GRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFS 65
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+N+ I G + R +A EM P I+Y+T+I + + + + L D+M
Sbjct: 66 YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMV 125
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
G PN +TY ++S L ++G E + ++M PD ++ L L R +
Sbjct: 126 CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSK 185
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
+ ++ + +NGV T + ++ G A VL+ + P ++
Sbjct: 186 AMLSLFGKYL-KNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVN-AGLVPTRVIYNT 243
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
L+ +TG+ + S + H+ D TY +I+GLC+A + A L EM
Sbjct: 244 LINGYCQTGELEGAFSTF--GQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQD 301
Query: 480 HDITPRYQTCRLILD 494
+ + P +T ++D
Sbjct: 302 NGVNPTVETFNTLID 316
>gi|359491272|ref|XP_003634254.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Vitis vinifera]
Length = 450
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 176/372 (47%), Gaps = 12/372 (3%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS 161
LV++++ + AL F+ P Y H S ++ +DI G++R + L++ M
Sbjct: 69 LVDRVLKLLWNHGPKALQFFKSLDYHPTYAHVSSSFDHAIDIAGRLRDYKTLWTLVDRMR 128
Query: 162 KGHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVE 220
+ T A + R+ AG+ + A++ F + G ++ + N +LD LCK +VE
Sbjct: 129 TRRLGPNPKTFAIITERYVSAGKPDRAIKIFFSMHEHGCVQDLNSFNTILDVLCKSKRVE 188
Query: 221 LARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQ 280
+A + ++ F I + G+ + ++ EA +MK C V++Y+T++
Sbjct: 189 MADNKLFKVFR------GRFRILLKGFFRAGQLKEAWEFFLQMKKRKCEIDVVTYTTVVH 242
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
+ K + +EM +G P+V TY + L K + E AI + E+M G P
Sbjct: 243 GFGVAGEVRKAQRVFNEMIGEGVLPSVATYNAFIQVLCKKDNVENAISVFEEMLRKGYMP 302
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
+S +N +I L R+++A+ + M ++ P+ +N +I F EK +V
Sbjct: 303 NSTTYNVVIRGLCHVGRMEKAME-FMARMKDDECEPNVQIYNVVIRYFCDAEEIEKGLNV 361
Query: 401 LEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS--QLLDDMVNKHHLSLDITTYTLVI 458
E+M + C PN+ T++ L+ + F K+D L+ +LL +MV + L T+ V+
Sbjct: 362 FEKMGDAD-CLPNLDTYNILISAMFVRKKSDYLLTAGKLLIEMVERGFLPRKF-TFNRVL 419
Query: 459 HGLCRANKCEWA 470
GL ++A
Sbjct: 420 DGLLLTGNQDFA 431
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 114/263 (43%), Gaps = 14/263 (5%)
Query: 234 PPNAHTFNIFIHGWCKINRVDEAQ--WT-IQEMKGHGCHPCVISYSTIIQSYCRQYNFSK 290
P AH + F H R+ + + WT + M+ P +++ I + Y +
Sbjct: 95 PTYAHVSSSFDHAIDIAGRLRDYKTLWTLVDRMRTRRLGPNPKTFAIITERYVSAGKPDR 154
Query: 291 VYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIY 350
++ M GC ++ ++ T++ L KS E A + K+ + F L+
Sbjct: 155 AIKIFFSMHEHGCVQDLNSFNTILDVLCKSKRVEMAD--NKLFKVFRGR-----FRILLK 207
Query: 351 TLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHC 410
RA +++EA + + ++M + D T+ T++ F G KA V EM E
Sbjct: 208 GFFRAGQLKEA-WEFFLQMKKRKCEIDVVTYTTVVHGFGVAGEVRKAQRVFNEMIG-EGV 265
Query: 411 KPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWA 470
P+V T++ ++ K + +S + ++M+ K ++ + TTY +VI GLC + E A
Sbjct: 266 LPSVATYNAFIQVLCKKDNVENAIS-VFEEMLRKGYMP-NSTTYNVVIRGLCHVGRMEKA 323
Query: 471 YLLFKEMIGHDITPRYQTCRLIL 493
M + P Q +++
Sbjct: 324 MEFMARMKDDECEPNVQIYNVVI 346
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 107/275 (38%), Gaps = 56/275 (20%)
Query: 250 INRVDEAQW-----TIQEMKGHGCHPCVI----SYSTIIQSYCRQYNFSKVYELLDEMQA 300
++RV + W +Q K HP S+ I R ++ ++ L+D M+
Sbjct: 70 VDRVLKLLWNHGPKALQFFKSLDYHPTYAHVSSSFDHAIDIAGRLRDYKTLWTLVDRMRT 129
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
+ PN T+ + +G + AI+I FF+
Sbjct: 130 RRLGPNPKTFAIITERYVSAGKPDRAIKI--------------FFS-------------- 161
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
M E+G D ++FNT++ + E A + L ++ + F L
Sbjct: 162 --------MHEHGCVQDLNSFNTILDVLCKSKRVEMADNKLFKVFR--------GRFRIL 205
Query: 421 LKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH 480
LK F+ G+ E L + K +D+ TYT V+HG A + A +F EMIG
Sbjct: 206 LKGFFRAGQLKEAWEFFLQ--MKKRKCEIDVVTYTTVVHGFGVAGEVRKAQRVFNEMIGE 263
Query: 481 DITPRYQTCRLILDEV-KQKHMYDAAEKIEAVMKK 514
+ P T + + K+ ++ +A E +++K
Sbjct: 264 GVLPSVATYNAFIQVLCKKDNVENAISVFEEMLRK 298
>gi|255660932|gb|ACU25635.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
venustus]
Length = 484
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/389 (25%), Positives = 194/389 (49%), Gaps = 14/389 (3%)
Query: 100 HYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEE 159
H LV ++H K+ + AL FRW ++H+ E + +++ILG+ +++ R +L +
Sbjct: 12 HELVYNVLHGAKNS-EHALQFFRWVERSNLFQHNRETHLKIIEILGRASKLNHARCILLD 70
Query: 160 M-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
M KG + ++ + G +++V+ F ++ G+E+ ++ + L + + G+
Sbjct: 71 MPKKGLEWDEDMWVLMIDSYGNGGIVQESVKLFQKMDELGVERTIKSYDALFKVISRRGR 130
Query: 219 VELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
+A+ F + L I P HTFNI I G+ +V+ A ++MK P VI+Y+T
Sbjct: 131 YMMAKRYFNKMLSEGIEPTRHTFNIMIWGFFLSGKVETANRFFEDMKNREITPDVITYNT 190
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+I Y R + + EM+ + P VVTYTT++ ++A+R+ E+MK G
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGYG 250
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP-DTSTFNTMITMFSHHGHHEK 396
K ++ ++ L+ L A ++ EA + + EM + +AP D S F +I+ G+ +
Sbjct: 251 IKANAITYSTLLPGLCNAEKMSEARSILK-EMVDKYIAPTDNSIFMRLISGQCKAGNLDA 309
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK-------HHLSL 449
A VL+ M +L + L+++ K G+ D+ + +LLD ++ K L +
Sbjct: 310 AADVLKAMIRLS-VPTEAGHYGVLIENYCKAGQYDQAV-KLLDKLIEKDIILRPQSTLHM 367
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMI 478
+ + Y +I LC + A L ++++
Sbjct: 368 ESSAYNPLIGYLCNNGQTAKAEALVRQLM 396
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 142/331 (42%), Gaps = 5/331 (1%)
Query: 180 GAGQWEDAVRTFDELGTFGL-EKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNA 237
GA E A++ F + L + N ET +++ L + K+ AR + L++ K + +
Sbjct: 21 GAKNSEHALQFFRWVERSNLFQHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDE 80
Query: 238 HTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDE 297
+ + I + V E+ Q+M G + SY + + R+ + ++
Sbjct: 81 DMWVLMIDSYGNGGIVQESVKLFQKMDELGVERTIKSYDALFKVISRRGRYMMAKRYFNK 140
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
M ++G P T+ ++ SG E A R E MK PD +N +I R +
Sbjct: 141 MLSEGIEPTRHTFNIMIWGFFLSGKVETANRFFEDMKNREITPDVITYNTMINGYYRVKK 200
Query: 358 VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTF 417
++EA Y VEM + P T+ T+I + + A ++EEM K K N T+
Sbjct: 201 MEEAEK-YFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEM-KGYGIKANAITY 258
Query: 418 HPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
LL K E S +L +MV+K+ D + + +I G C+A + A + K M
Sbjct: 259 STLLPGLCNAEKMSEARS-ILKEMVDKYIAPTDNSIFMRLISGQCKAGNLDAAADVLKAM 317
Query: 478 IGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
I + ++++ + YD A K+
Sbjct: 318 IRLSVPTEAGHYGVLIENYCKAGQYDQAVKL 348
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 125/267 (46%), Gaps = 6/267 (2%)
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
+ ++++ A+ + +M G + +I SY + +L +M G +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVLMIDSYGNGGIVQESVKLFQKMDELGVERTIK 116
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
+Y + +++ G + A R KM G +P FN +I+ + +V+ A ++ +
Sbjct: 117 SYDALFKVISRRGRYMMAKRYFNKMLSEGIEPTRHTFNIMIWGFFLSGKVETANRFFE-D 175
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M + PD T+NTMI + E+A EM K + +P V T+ L+K
Sbjct: 176 MKNREITPDVITYNTMINGYYRVKKMEEAEKYFVEM-KGRNIEPTVVTYTTLIKGYVSVD 234
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ D+ L +L+++M + + + TY+ ++ GLC A K A + KEM+ I P +
Sbjct: 235 QVDDAL-RLVEEM-KGYGIKANAITYSTLLPGLCNAEKMSEARSILKEMVDKYIAPTDNS 292
Query: 489 C--RLILDEVKQKHMYDAAEKIEAVMK 513
RLI + K ++ AA+ ++A+++
Sbjct: 293 IFMRLISGQCKAGNLDAAADVLKAMIR 319
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 5/205 (2%)
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N T+ ++ L ++ A I M G + D + +I + G VQE+V ++
Sbjct: 44 NRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVLMIDSYGNGGIVQESVKLF 103
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
Q +M E GV +++ + + S G + A +M E +P TF+ ++ F
Sbjct: 104 Q-KMDELGVERTIKSYDALFKVISRRGRYMMAKRYFNKMLS-EGIEPTRHTFNIMIWGFF 161
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
+GK E ++ +DM N+ ++ D+ TY +I+G R K E A F EM G +I P
Sbjct: 162 LSGKV-ETANRFFEDMKNRE-ITPDVITYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPT 219
Query: 486 YQT-CRLILDEVKQKHMYDAAEKIE 509
T LI V + DA +E
Sbjct: 220 VVTYTTLIKGYVSVDQVDDALRLVE 244
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 102/239 (42%), Gaps = 20/239 (8%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRFSG---AGQW 184
G + ++ Y ++ L +M + R++L+EM +I T N+I MR SG AG
Sbjct: 250 GIKANAITYSTLLPGLCNAEKMSEARSILKEMVDKYIAPTDNSI--FMRLISGQCKAGNL 307
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELA---------RSVFLELKSCIPP 235
+ A + + +L++ CK G+ + A + + L +S +
Sbjct: 308 DAAADVLKAMIRLSVPTEAGHYGVLIENYCKAGQYDQAVKLLDKLIEKDIILRPQSTLHM 367
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCH-PCVISYSTIIQSYCRQYNFSKVYEL 294
+ +N I C + +A+ ++++ G P ++ T+I+ + ++ + +EL
Sbjct: 368 ESSAYNPLIGYLCNNGQTAKAEALVRQLMKLGVQDPTALN--TLIRGHSQEGSPDSAFEL 425
Query: 295 LDEMQAQGCPPNVVTYTT-VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
L M + Y + V SYL +S + +A + M PDS F ++ +L
Sbjct: 426 LKIMLRRKVDSEKSAYDSLVQSYLKRS-EPADAKAALDSMIENDHLPDSSLFRSVMESL 483
>gi|297839849|ref|XP_002887806.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297333647|gb|EFH64065.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 541
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 127/477 (26%), Positives = 212/477 (44%), Gaps = 30/477 (6%)
Query: 24 RFHSSSENCSHIVSSSPIESYCSDGARLDHHQVLCVDSPRLPDIDVIISKVHVGSSEDEV 83
RF SS+ + I+S A D +Q L +P + + +I V SE +
Sbjct: 59 RFVSSNHFSTQIIS-----------AMFDVNQAL---APLVQGLIDLIRHVSELESEADA 104
Query: 84 FQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDI 143
SL++ ++ +H LI +++W+ A F+W G G + ++M+ +
Sbjct: 105 MASLEE----SSFDLNHDSFYSLIWELREEWRLAFLAFKW-GEKRGCDDQKAC-DLMIWV 158
Query: 144 LGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNT 203
LG ++ + L+ +M T + +M R++ A A+RTFD + F +
Sbjct: 159 LGNHQKFNIAWCLIRDMFHVSKDTRKAMFLMMDRYAAANDTIQAIRTFDIMDKFKHTPDD 218
Query: 204 ETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKI-NRVDEAQWTIQE 262
E LL LC+ G +E A+ L K P + FNI ++GWC I V EA+ +E
Sbjct: 219 EAFQGLLYALCRHGHIEKAQEFMLASKKLFPVDVEGFNIILNGWCNIWTDVTEAKRIWRE 278
Query: 263 MKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGD 322
M + P SYS +I + + N L DEM+ +G P +V Y +++ L +
Sbjct: 279 MGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIVVYNSLLYVLTRENC 338
Query: 323 FEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFN 382
F EA+++ EKM G KP S +N +I L A ++ A V + EN ++P TF+
Sbjct: 339 FHEAMKLLEKMDEEGLKPGSVTYNSMIRPLCEAGKLDVARNVLATMISEN-LSPTVDTFH 397
Query: 383 TMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMV 442
+ + + E VL +M K+ P TF +L FK GK E ++ +M
Sbjct: 398 AFLEAVNFDTNLE----VLGQM-KVSGLGPTEDTFLLILGKLFK-GKQPENALKIWAEM- 450
Query: 443 NKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQK 499
++ + + Y + GL E A ++ EM P + +L+E K K
Sbjct: 451 DRFEIVANPALYLATVQGLLSCGWLEKAREIYSEMKSKGF-PGNPMLQKLLEEQKVK 506
>gi|297839201|ref|XP_002887482.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333323|gb|EFH63741.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 490
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 106/437 (24%), Positives = 200/437 (45%), Gaps = 20/437 (4%)
Query: 90 DHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQ 149
D V + P +V K++ R + + K+A F WAG Y H Y M+DIL +
Sbjct: 16 DSVVDLTTP---VVCKILQRLQYEEKTAFRFFTWAGHQEHYSHEPIAYNEMIDILSSTKY 72
Query: 150 MD-QMRALLEEM-----SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNT 203
+ Q R +++ + +K +V + + +++R++ ++ V+ F + ++
Sbjct: 73 KNKQFRIVIDMLDYMKRNKKTVVPADILLEILRKY--CERYLTHVQKFAKRKRIRVKTQP 130
Query: 204 E--TMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQ 261
E N+LLD LCK G V+ ++ ++ + P+A TFN+ GWC++ +A ++
Sbjct: 131 EINAFNMLLDALCKCGLVKEGEALLRRMRHRVKPDATTFNVLFFGWCRVRDPKKAMKLLE 190
Query: 262 EMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG---CPPNVVTYTTVMSYLA 318
EM G P +Y I ++C+ + +L + M +G P T+ ++ LA
Sbjct: 191 EMIQAGHKPENFTYCAAIDTFCQAGMVDEAADLFEFMITKGSVVSAPTAKTFALMIVALA 250
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDT 378
K+ EE + +M G PD + +I + A +V+EA Y + EM G PD
Sbjct: 251 KNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAGKVEEA-YKFLDEMSNKGYPPDI 309
Query: 379 STFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLL 438
T+N + + + ++A + M + C P+VQT++ L+ F+ D +
Sbjct: 310 VTYNCFLRVLCENRKSDEALKLYGRMVE-SRCAPSVQTYNMLISMFFEMDDPDGAFNTWK 368
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQ 498
+ +++ DI TY ++I+GL ++ + A L +E++ + Y+ L +
Sbjct: 369 E--MDERDCVQDIETYCVMINGLFDCHRAKEACFLLEEVVNKGLKLPYRAFDSFLMRLST 426
Query: 499 KHMYDAAEKIEAVMKKL 515
A K+ MKK
Sbjct: 427 VGNLKAIHKLSEHMKKF 443
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 171/353 (48%), Gaps = 10/353 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
G H + +++ + + ALL +M K G ++ T+ ++ F ++++A
Sbjct: 645 GISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEA 704
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHG 246
V D + GLE N N +++ LCK + A +F + K I +A T+N I G
Sbjct: 705 VSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISG 764
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C R +A +++M P VI ++ +I ++ ++ N + L EM + PN
Sbjct: 765 LCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPN 824
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
++TY ++++ G +A + + M G PD +N LI ++ RV++ + ++
Sbjct: 825 ILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLF- 883
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCK--PNVQTFHPLLKSC 424
EM G+ D T+NT+I + G A V N++ C P++ T++ LL
Sbjct: 884 CEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVF---NRMVDCGVPPDIVTYNILLDCL 940
Query: 425 FKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
GK ++ L + D + K+ + +DI TY ++I G+CR +K + A+ LF+ +
Sbjct: 941 CNNGKIEKALVMVED--LQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSL 991
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 175/366 (47%), Gaps = 12/366 (3%)
Query: 124 AGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQ 183
G +S ++ L +R D + LE + + ++ +++ + +
Sbjct: 21 GGGASARAYSGYREKLRTGFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRR 80
Query: 184 WEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNI 242
+E + ++ FG+ + + +L+ C+ ++ LA S+ + +K P+ TF
Sbjct: 81 YETVIYFSQQMELFGISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGS 140
Query: 243 FIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
+HG+C NR+ +A + M G P V+ Y+T+I C+ + + ELL+EM+ +G
Sbjct: 141 LLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKG 200
Query: 303 -CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
++VTY T+++ L SG++ +A RI M PD F LI + + EA
Sbjct: 201 RLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEA 260
Query: 362 VYVYQVEMPENGVAPDTSTFNTMITMFSHHG---HHEKAFHVLEEMNKLEHCKPNVQTFH 418
+Y+ +M ++ + P+T T+N++I HG H +K F ++ + C PNV T++
Sbjct: 261 QELYK-QMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMAS----KGCFPNVVTYN 315
Query: 419 PLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
L+ K+ + ++ + +L M + L D TY +IHG C+ K A +F M+
Sbjct: 316 TLINGFCKSRRVEDGM-KLFQRMY-REGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMV 373
Query: 479 GHDITP 484
+TP
Sbjct: 374 SCGVTP 379
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 166/348 (47%), Gaps = 6/348 (1%)
Query: 149 QMDQMRALLEEMSKGH-IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN 207
+ D L EM + I ++ +V+ + +++ + F ++ G+ + +
Sbjct: 595 KFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFT 654
Query: 208 LLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
+L+ C+ + LA ++ ++ K P+ T ++G+C+ NR EA + M
Sbjct: 655 ILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAEL 714
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
G P V+ Y+T+I C+ + + E+ M+ +G + VTY T++S L SG + +A
Sbjct: 715 GLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDA 774
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
R+ M P+ FF LI T + + EA +Y+ EM V P+ T+N++I
Sbjct: 775 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYK-EMIRRSVHPNILTYNSLIN 833
Query: 387 MFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHH 446
F G A H+ + M + C P+V T++ L+ K+ + ++ + +L +M ++
Sbjct: 834 GFCIQGRLGDAKHMFDLMVS-KGCFPDVVTYNTLITGFCKSKRVEDGM-KLFCEMTHQ-G 890
Query: 447 LSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
L D TY +IHG C+A K A +F M+ + P T ++LD
Sbjct: 891 LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLD 938
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 162/363 (44%), Gaps = 7/363 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
G H + +++ + ++ ++L +M K G+ ++ T ++ F + DA
Sbjct: 95 GISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDA 154
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIH 245
+ G E N N L+D LCK G V +A + +E K + + T+N +
Sbjct: 155 FSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLT 214
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G C +A +++M +P V +++ +I ++ +Q N + EL +M P
Sbjct: 215 GLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGP 274
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N VTY ++++ L G A + + M G P+ +N LI ++ RV++ + ++
Sbjct: 275 NTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLF 334
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
Q M G+ DT T+NT+I + G A + M P++ T LL
Sbjct: 335 Q-RMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSC-GVTPDIITHCILLHGLC 392
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
G+ + + D + +L I Y ++IHGLC+A+K E A+ LF + + P
Sbjct: 393 VNGEIGSAMVKFNDMRSGEKYLG--IVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPD 450
Query: 486 YQT 488
+T
Sbjct: 451 ART 453
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 143/301 (47%), Gaps = 5/301 (1%)
Query: 209 LLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG 267
+L + K K ++ +F ++++ I + ++F I IH +C+ +R A + +M G
Sbjct: 621 VLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLG 680
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
P +++ +++ +C+ F + L+D M G PNVV Y TV++ L K+ D A+
Sbjct: 681 FQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNAL 740
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITM 387
I M+ G D+ +N LI L + R +A + + +M + + P+ F +I
Sbjct: 741 EIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLR-DMVKRKIDPNVIFFTALIDT 799
Query: 388 FSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHL 447
F G+ +A ++ +EM + PN+ T++ L+ G+ + + D MV+K
Sbjct: 800 FVKEGNLLEAKNLYKEMIR-RSVHPNILTYNSLINGFCIQGRLGDA-KHMFDLMVSKGCF 857
Query: 448 SLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEK 507
D+ TY +I G C++ + E LF EM + T ++ Q + A+K
Sbjct: 858 P-DVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQK 916
Query: 508 I 508
+
Sbjct: 917 V 917
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 150/345 (43%), Gaps = 47/345 (13%)
Query: 95 AIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQ 152
QPS + L++ F + ++ A+ + G E + IY +++ L K R ++
Sbjct: 680 GFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAEL-GLEPNVVIYNTVINGLCKNRDLNN 738
Query: 153 MRALLEEMSKGHIV----TLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNL 208
+ M K IV T NT+ + +G+W DA R ++ ++ N
Sbjct: 739 ALEIFYGMEKKGIVADAVTYNTL---ISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTA 795
Query: 209 LLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG 267
L+DT KEG + A++++ E+ + + PN T+N I+G+C R+ +A+ M G
Sbjct: 796 LIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKG 855
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG------------------------- 302
C P V++Y+T+I +C+ +L EM QG
Sbjct: 856 CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQ 915
Query: 303 ----------CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
PP++VTY ++ L +G E+A+ + E ++ D +N +I +
Sbjct: 916 KVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGM 975
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKA 397
R +V+EA +++ + GV D + TMI+ +G +A
Sbjct: 976 CRNDKVKEAWCLFR-SLTRKGVKLDAIAYITMISGLCRNGLRREA 1019
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 120/273 (43%), Gaps = 6/273 (2%)
Query: 218 KVELARSVFLELKSCIP-PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYS 276
+ E A +FLE+ P P+ F + + R + + Q+M+ G + S++
Sbjct: 45 RFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFT 104
Query: 277 TIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIV 336
+I +CR S +L +M G P++VT+ +++ +A + M
Sbjct: 105 ILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKS 164
Query: 337 GSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG-VAPDTSTFNTMITMFSHHGHHE 395
G +P+ +N LI L + V A+ + EM + G +A D T+NT++T + G
Sbjct: 165 GYEPNVVVYNTLIDCLCKNGDVNIALELLN-EMEKKGRLAADLVTYNTLLTGLCYSGEWR 223
Query: 396 KAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYT 455
+A +L +M K P+V TF L+ + K G DE +Q L + + + + TY
Sbjct: 224 QAARILRDMTK-RRINPDVFTFTALIDAFVKQGNLDE--AQELYKQMLQSSIGPNTVTYN 280
Query: 456 LVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+I+GLC + A F M P T
Sbjct: 281 SLINGLCMHGRLYHAKKTFDLMASKGCFPNVVT 313
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 107/208 (51%), Gaps = 9/208 (4%)
Query: 143 ILGKVRQMDQMRALLEEMSKG---HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGL 199
I G++ M L+ +SKG +VT NT+ + F + + ED ++ F E+ GL
Sbjct: 837 IQGRLGDAKHMFDLM--VSKGCFPDVVTYNTL---ITGFCKSKRVEDGMKLFCEMTHQGL 891
Query: 200 EKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQW 258
+ T N L+ C+ GK+ +A+ VF + C +PP+ T+NI + C ++++A
Sbjct: 892 VGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALV 951
Query: 259 TIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLA 318
+++++ + +I+Y+ IIQ CR + + L + +G + + Y T++S L
Sbjct: 952 MVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLC 1011
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRFFN 346
++G EA ++ +MK G P R ++
Sbjct: 1012 RNGLRREADKLCTRMKEDGFMPSERIYD 1039
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 107/220 (48%), Gaps = 4/220 (1%)
Query: 288 FSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNC 347
F +L EM P+VV +T +++ +A +E I +++M++ G D F
Sbjct: 46 FEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTI 105
Query: 348 LIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKL 407
LI+ R SR+ A+ + +M + G P TF +++ F AF ++ M K
Sbjct: 106 LIHCFCRCSRLSLALSILG-KMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKS 164
Query: 408 EHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKC 467
+ +PNV ++ L+ K G + L +LL++M K L+ D+ TY ++ GLC + +
Sbjct: 165 GY-EPNVVVYNTLIDCLCKNGDVNIAL-ELLNEMEKKGRLAADLVTYNTLLTGLCYSGEW 222
Query: 468 EWAYLLFKEMIGHDITPRYQTCRLILDE-VKQKHMYDAAE 506
A + ++M I P T ++D VKQ ++ +A E
Sbjct: 223 RQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQE 262
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 89/178 (50%), Gaps = 7/178 (3%)
Query: 161 SKG---HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEG 217
SKG ++VT NT+ + F + + ED ++ F + GL +T T N L+ C+ G
Sbjct: 304 SKGCFPNVVTYNTL---INGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVG 360
Query: 218 KVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYS 276
K+ +A+ +F + SC + P+ T I +HG C + A +M+ + +++Y+
Sbjct: 361 KLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYN 420
Query: 277 TIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
+I C+ + +EL + +G P+ TYT ++ L K+G EA + +MK
Sbjct: 421 IMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMK 478
>gi|255660946|gb|ACU25642.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 484
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 193/389 (49%), Gaps = 14/389 (3%)
Query: 100 HYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEE 159
H LV ++H K+ + AL FRW +EH+ E + +++ILG+ +++ R +L +
Sbjct: 12 HELVYNVLHGAKNX-EHALQFFRWVERSNLFEHNRETHHKIIEILGRASKLNHARCILLD 70
Query: 160 M-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
M KG + ++ + AG +++V+ F ++ G+E+ ++ + L + + G+
Sbjct: 71 MPKKGLEWDEDLWVLLIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGR 130
Query: 219 VELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
+A+ F + L P HTFNI I G+ +V+ A ++MK P V++Y+T
Sbjct: 131 YMMAKRYFNKMLSEGNEPTRHTFNIMIWGFFLSGKVETANRFFEDMKSREIMPDVVTYNT 190
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+I Y R + + EM+ + P VVTYTT++ ++A+R+ E+MK G
Sbjct: 191 MIXGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDALRLVEEMKGFG 250
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP-DTSTFNTMITMFSHHGHHEK 396
KP++ ++ L+ L A ++ EA + + EM E + P D S F +I+ G +
Sbjct: 251 IKPNAITYSTLLPGLCNAQKMSEARSILK-EMVEKYITPTDNSIFLRLISGQCKAGDLDA 309
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK-------HHLSL 449
A VL+ M +L + L+++ K G+ D+ + +LLD ++ K L L
Sbjct: 310 AADVLKAMIRLS-VPTEAGHYGVLIENYCKAGQYDQAV-KLLDRLIEKDIILRPQSTLHL 367
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMI 478
+ + Y +I LC + A L ++++
Sbjct: 368 EPSAYNPLIEYLCNNGQTAKAESLVRQLM 396
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 144/331 (43%), Gaps = 5/331 (1%)
Query: 180 GAGQWEDAVRTFDELGTFGL-EKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNA 237
GA E A++ F + L E N ET + +++ L + K+ AR + L++ K + +
Sbjct: 21 GAKNXEHALQFFRWVERSNLFEHNRETHHKIIEILGRASKLNHARCILLDMPKKGLEWDE 80
Query: 238 HTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDE 297
+ + I + K V E+ Q+M+ G + SY + + R+ + ++
Sbjct: 81 DLWVLLIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNK 140
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
M ++G P T+ ++ SG E A R E MK PD +N +I R +
Sbjct: 141 MLSEGNEPTRHTFNIMIWGFFLSGKVETANRFFEDMKSREIMPDVVTYNTMIXGYYRVKK 200
Query: 358 VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTF 417
++EA Y VEM + P T+ T+I + + A ++EEM KPN T+
Sbjct: 201 MEEAEK-YFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDALRLVEEMKGF-GIKPNAITY 258
Query: 418 HPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
LL K E S +L +MV K+ D + + +I G C+A + A + K M
Sbjct: 259 STLLPGLCNAQKMSEARS-ILKEMVEKYITPTDNSIFLRLISGQCKAGDLDAAADVLKAM 317
Query: 478 IGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
I + ++++ + YD A K+
Sbjct: 318 IRLSVPTEAGHYGVLIENYCKAGQYDQAVKL 348
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 130/280 (46%), Gaps = 6/280 (2%)
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
N T + I + ++++ A+ + +M G + +I SY + + +L
Sbjct: 44 NRETHHKIIEILGRASKLNHARCILLDMPKKGLEWDEDLWVLLIDSYGKAGIVQESVKLF 103
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
+M+ G + +Y + + + G + A R KM G++P FN +I+ +
Sbjct: 104 QKMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEGNEPTRHTFNIMIWGFFLS 163
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQ 415
+V+ A ++ +M + PD T+NTMI + E+A EM K + +P V
Sbjct: 164 GKVETANRFFE-DMKSREIMPDVVTYNTMIXGYYRVKKMEEAEKYFVEM-KGRNIEPTVV 221
Query: 416 TFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFK 475
T+ L+K + D+ L +L+++M + + TY+ ++ GLC A K A + K
Sbjct: 222 TYTTLIKGYVSVDRVDDAL-RLVEEM-KGFGIKPNAITYSTLLPGLCNAQKMSEARSILK 279
Query: 476 EMIGHDITPRYQT--CRLILDEVKQKHMYDAAEKIEAVMK 513
EM+ ITP + RLI + K + AA+ ++A+++
Sbjct: 280 EMVEKYITPTDNSIFLRLISGQCKAGDLDAAADVLKAMIR 319
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 59/147 (40%), Gaps = 12/147 (8%)
Query: 181 AGQWEDAVRTFDEL----------GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK 230
AGQ++ AV+ D L T LE + N L++ LC G+ A S+ +L
Sbjct: 339 AGQYDQAVKLLDRLIEKDIILRPQSTLHLEPSA--YNPLIEYLCNNGQTAKAESLVRQLM 396
Query: 231 SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSK 290
+ N I G + D A ++ M +Y +++QSY ++ +
Sbjct: 397 KLGVQDPTALNALIRGHSQEGSPDSAFELLKIMLRRKARSEKSAYDSLVQSYLKKSEPAD 456
Query: 291 VYELLDEMQAQGCPPNVVTYTTVMSYL 317
LD M G P+ + +VM L
Sbjct: 457 AKAALDSMIENGHLPDPALFRSVMESL 483
>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
Length = 650
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 171/346 (49%), Gaps = 5/346 (1%)
Query: 170 TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL 229
T ++ R +G A+ ++ ++ + T +++D LCK+G+++ A S F E+
Sbjct: 232 TYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEM 291
Query: 230 KS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
++ I N T+N I +C R D+ +++M P V+++S +I S ++
Sbjct: 292 ETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKL 351
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
++ +L +EM +G PN +TY +++ L +EA ++ + M G PD +N L
Sbjct: 352 TEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNIL 411
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
I +A +V + + +++ +M G+ DT T++T+I F A V +EM +
Sbjct: 412 INGFCKAKQVDDGMRLFR-KMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVS-Q 469
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
P + T+ LL G+ +E L L D ++K + LDI Y ++IHG+C ANK +
Sbjct: 470 GVHPGIMTYAILLDGLCDNGELEEALGIL--DQMHKCKMELDIGIYNIIIHGMCNANKVD 527
Query: 469 WAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
A+ LF + + Q+ ++L + ++ A+ + MK+
Sbjct: 528 DAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKE 573
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 167/347 (48%), Gaps = 14/347 (4%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
+ + +L + +Q D + AL ++M KG L T+ ++ F + A ++
Sbjct: 93 FNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIF 152
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIP-----PNAHTFNIFIHGWCKI 250
G E NT T N LL+ LC EG+V A +EL C+ P+ T N ++G C
Sbjct: 153 KLGYEPNTVTFNTLLNGLCLEGRVFEA----VELVDCMVLSQHVPDLITLNTIVNGLCLK 208
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
+RV EA I M +GC P +Y I+ C+ N + +LL +M+ + P+VVTY
Sbjct: 209 DRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTY 268
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
T ++ L K G ++A+ +M+ G K + +N LI + R + + + +M
Sbjct: 269 TIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLR-DMI 327
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKT 430
+ P+ TF+ +I G +A + EM +PN T++ L+ +
Sbjct: 328 TRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMIT-RGIEPNTITYNSLIYGLCNDKRL 386
Query: 431 DECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
DE +Q++D MV+K DI TY ++I+G C+A + + LF++M
Sbjct: 387 DEA-NQMMDLMVSK-GCDPDIWTYNILINGFCKAKQVDDGMRLFRKM 431
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/450 (23%), Positives = 204/450 (45%), Gaps = 58/450 (12%)
Query: 59 VDSPRLPDIDVIISKVHVGSSEDEVFQS--LKQDHVCNAIQPSHYLVNKLIHRF--KDDW 114
V S +PD+ + + V+ +D V ++ L + N QP+ + +++R +
Sbjct: 187 VLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNT 246
Query: 115 KSALGIFRWAGSCPGYEHSS-----EIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTL 168
SAL + R EH Y +++D L K ++D + EM +KG +
Sbjct: 247 ASALDLLR------KMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANV 300
Query: 169 NTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE 228
T ++ F G+W+D + ++ T + N T + L+D+L KEGK+ A+ ++ E
Sbjct: 301 FTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNE 360
Query: 229 L-------------------------------------KSCIPPNAHTFNIFIHGWCKIN 251
+ K C P+ T+NI I+G+CK
Sbjct: 361 MITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGC-DPDIWTYNILINGFCKAK 419
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
+VD+ ++M G ++YST+IQ +C+ ++ EM +QG P ++TY
Sbjct: 420 QVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYA 479
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
++ L +G+ EEA+ I ++M + D +N +I+ + A++V +A ++ +P
Sbjct: 480 ILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLF-CSLPS 538
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
GV D ++N M++ +A + +M K + +P+ T++ L+++ + G
Sbjct: 539 KGVKRDIQSYNIMLSGLCKRSSLSEADALFRKM-KEDGYEPDGCTYNTLIRAHLR-GNDI 596
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGL 461
QL+++M + S D +T +V+ L
Sbjct: 597 TTSVQLIEEM-KRCGFSSDASTVKIVMDML 625
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 131/295 (44%), Gaps = 12/295 (4%)
Query: 215 KEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVIS 274
K+ V L +S+ L+S P FN + + D ++M+ G + +
Sbjct: 71 KDDAVALFQSM---LRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYT 127
Query: 275 YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
+ +I +CR+ + + ++ G PN VT+ T+++ L G EA+ + + M
Sbjct: 128 LNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMV 187
Query: 335 IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHH 394
+ PD N ++ L RV EAV + M NG P+ T+ ++ G+
Sbjct: 188 LSQHVPDLITLNTIVNGLCLKDRVSEAVDLI-ARMMANGCQPNQFTYGPILNRMCKSGNT 246
Query: 395 EKAFHVLEEMNKLEH--CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
A +L K+EH KP+V T+ ++ + K G+ D+ LS +M K + ++
Sbjct: 247 ASALDLLR---KMEHRKIKPHVVTYTIIIDNLCKDGRLDDALS-FFSEMETK-GIKANVF 301
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE-VKQKHMYDAAE 506
TY +I C + + L ++MI ITP T ++D VK+ + +A +
Sbjct: 302 TYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKD 356
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 141/333 (42%), Gaps = 47/333 (14%)
Query: 38 SSPIESYCS-----DGARLDHHQVLCVDSPRLPDIDVIISKVHVGSSEDEVFQSLKQDHV 92
+S I S+CS DGA+L + +P + +I + E + L + +
Sbjct: 304 NSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEA-KDLYNEMI 362
Query: 93 CNAIQPSHYLVNKLIHRFKDDWK--SALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQM 150
I+P+ N LI+ +D + A + S G + Y ++++ K +Q+
Sbjct: 363 TRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVS-KGCDPDIWTYNILINGFCKAKQV 421
Query: 151 DQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLL 209
D L +MS +G I T + +++ F + + A + F E+ + G+ T +L
Sbjct: 422 DDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAIL 481
Query: 210 LDTLCKEGKVELARSVFLELKSC------------------------------------I 233
LD LC G++E A + ++ C +
Sbjct: 482 LDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGV 541
Query: 234 PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
+ ++NI + G CK + + EA ++MK G P +Y+T+I+++ R + + +
Sbjct: 542 KRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQ 601
Query: 294 LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
L++EM+ G + T VM L+ SG+ +++
Sbjct: 602 LIEEMKRCGFSSDASTVKIVMDMLS-SGELDKS 633
>gi|356512321|ref|XP_003524868.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37230-like [Glycine max]
Length = 733
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 103/411 (25%), Positives = 196/411 (47%), Gaps = 17/411 (4%)
Query: 117 ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI----VTLNTIA 172
AL +RW + H+ E +V ILG+ +++ R +L ++G + VT +
Sbjct: 102 ALQFYRWVERAGLFTHTPETTLKIVQILGRYSKLNHARCILFNDTRGGVSRAAVTEDAFV 161
Query: 173 KVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKS 231
++ + AG +++V+ F ++ GL++ ++ + L + + G+ +A+ + L
Sbjct: 162 SLIDSYGRAGIVQESVKLFKKMKELGLDRTVKSYDALFKVILRRGRYMMAKRYYNAMLLE 221
Query: 232 CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKV 291
+ P HTFNI + G R+D A ++MK G P V++Y+T+I Y R +
Sbjct: 222 GVDPTRHTFNILLWGMFLSLRLDTAVRFYEDMKSRGILPDVVTYNTLINGYFRFKKVDEA 281
Query: 292 YELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYT 351
+L EM+ + PNV+++TT++ +G ++A+++ E+MK G KP+ F+ L+
Sbjct: 282 EKLFVEMKGRDIVPNVISFTTMLKGYVAAGRIDDALKVFEEMKGCGVKPNVVTFSTLLPG 341
Query: 352 LGRASRVQEAVYVYQVEMPENGVAP-DTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHC 410
L A ++ EA V EM E +AP D + F M++ G + A VL+ M +L
Sbjct: 342 LCDAEKMAEARDVLG-EMVERYIAPKDNALFMKMMSCQCKAGDLDAAADVLKAMVRL--S 398
Query: 411 KPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHL-------SLDITTYTLVIHGLCR 463
P + +L F + +LLD ++ K + ++ + Y L+I LC
Sbjct: 399 IPTEAGHYGVLIESFCKANVYDKAEKLLDKLIEKEIVLRPQNDSEMEPSAYNLMIGYLCE 458
Query: 464 ANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
+ A F++++ + LI K+ + D+A +I +M +
Sbjct: 459 HGRTGKAETFFRQLLKKGVQDSVAFNNLIRGHSKEGN-PDSAFEIMKIMGR 508
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 95/225 (42%), Gaps = 7/225 (3%)
Query: 207 NLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
NL++ LC+ G+ A + F +L ++ FN I G K D A ++ M
Sbjct: 450 NLMIGYLCEHGRTGKAETFFRQLLKKGVQDSVAFNNLIRGHSKEGNPDSAFEIMKIMGRR 509
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
G V SY +I+SY R+ + LD M G P Y +VM L G + A
Sbjct: 510 GVARDVDSYRLLIESYLRKGEPADAKTALDGMLESGHLPESSLYRSVMESLFDDGRVQTA 569
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
R+ + M G+K + ++ L V+EA+ + M NG PD F+ +++
Sbjct: 570 SRVMKSMVEKGAKENMDLVLKILEALLLRGHVEEALGRIDLLM-HNGCEPD---FDHLLS 625
Query: 387 MFSHHGHHEKAFHVLEEMNKLEH-CKPNVQTFHPLLKSCFKTGKT 430
+ A +L+ + LE C + + +L + GKT
Sbjct: 626 VLCEKEKTIAALKLLDFV--LERDCIIDFSIYDKVLDALLAAGKT 668
>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
Length = 768
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 181/359 (50%), Gaps = 6/359 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++D L K + +D+ + + + M KG +T ++ + G+W++ V+ E+
Sbjct: 205 YTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMS 264
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
T GL+ + +LLD LCK G+ AR++F L + I P+ + I +HG+ +
Sbjct: 265 THGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALS 324
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
E + M +G P ++ + +Y ++ + + D+M+ Q P VV Y ++
Sbjct: 325 EMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALI 384
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
L K G ++A+ +M G PD F+ L+Y L + ++A ++ E+ + G+
Sbjct: 385 DALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLF-FEVLDQGI 443
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
+ + FN ++ G +A +++ M +++ +P+V +++ L+ TG+ DE
Sbjct: 444 RLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVD-VRPDVISYNTLVDGHCLTGRIDEA- 501
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
++LLD MV+ L D TY ++HG C+A + + AY LF+EM+ +TP T IL
Sbjct: 502 AKLLDVMVSI-GLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTIL 559
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 160/357 (44%), Gaps = 14/357 (3%)
Query: 92 VCNAIQPSHYLVNKLIHRF--KDDWKSALGIF---RWAGSCPGYEHSSEIYEMMVDILGK 146
V N + P H++ N + + + K A+ IF R PG + Y ++D L K
Sbjct: 334 VRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVN----YGALIDALCK 389
Query: 147 VRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTET 205
+ ++D +M ++G + + ++ +WE A + F E+ G+ N
Sbjct: 390 LGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAF 449
Query: 206 MNLLLDTLCKEGKV-ELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
N+L+ LC+EG+V E R + L L+ + P+ ++N + G C R+DEA + M
Sbjct: 450 FNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMV 509
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
G P +Y+T++ YC+ Y L EM +G P VVTY T++ L + G F
Sbjct: 510 SIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFC 569
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTM 384
EA + M K D + ++ L R + V EA ++Q + + D T N M
Sbjct: 570 EAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQ-SLCSKDLQLDIFTINIM 628
Query: 385 ITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDM 441
I G E A + ++ P+V+T+ + ++ K G +E L +L M
Sbjct: 629 IGALLKGGRKEDAMDLFATISAY-GLVPDVETYRLIAENLIKEGSLEE-LDELFSAM 683
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 164/393 (41%), Gaps = 54/393 (13%)
Query: 143 ILGKVRQ----MDQMRALLEEM----SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
I G+ R +D L +EM + T N + V+ R + E V F+ +
Sbjct: 21 IAGRARSGSLGLDDALKLFDEMLTYARPASVRTFNRLLTVVSRARCSSASELVVSLFNRM 80
Query: 195 ---GTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIP-PNAHTFNIFIHGWCK 249
+ + ++ T +L+ C+ G+++ + F L LK+ N F + G C
Sbjct: 81 IRECSVKVAPSSCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCD 140
Query: 250 INRVDEA-QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC---PP 305
RVDEA ++ M GC VISY+ +++ C + + EL+ M G P
Sbjct: 141 AKRVDEATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTP 200
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
NVVTYTTV+ L K+ + A + + M G +P++ + CLI+ + +E V +
Sbjct: 201 NVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQML 260
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
Q EM +G+ PD + ++ +G +A ++ + + + + KP+V + LL
Sbjct: 261 Q-EMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIR-KGIKPHVTIYGILLHGYA 318
Query: 426 KTGKTDECLSQLLDDMVNK-----HH-----------------------------LSLDI 451
G E + LD MV HH LS +
Sbjct: 319 TEGALSE-MHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGV 377
Query: 452 TTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
Y +I LC+ + + A L F +MI +TP
Sbjct: 378 VNYGALIDALCKLGRVDDAVLKFNQMINEGVTP 410
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 122/270 (45%), Gaps = 17/270 (6%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y +VD ++D+ LL+ M K T NT+ + + A + +DA F
Sbjct: 485 YNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTL---LHGYCKARRIDDAYSLFR 541
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL----KSCIPPNAHTFNIFIHGWC 248
E+ GL T N +L L + G+ A+ ++L + + C + +T+ I ++G C
Sbjct: 542 EMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKC---DIYTYTIILNGLC 598
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
+ N VDEA Q + + + + +I + + +L + A G P+V
Sbjct: 599 RNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVE 658
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI-YTLGRASRVQEAVYVYQV 367
TY + L K G EE + M+ G+ P+SR N L+ + L R + VY+ ++
Sbjct: 659 TYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDIGRAGVYLSKL 718
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKA 397
+ E + + ST + +I+++S + + A
Sbjct: 719 D--EKNFSLEASTTSMLISIYSRAEYQQLA 746
>gi|255539196|ref|XP_002510663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551364|gb|EEF52850.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 695
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 151/301 (50%), Gaps = 4/301 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTI-AKVMRRFSGAGQWEDAVRTFDELG 195
Y +++D + + R +L+EM +I+ + + ++++ + G+W+ + + E+
Sbjct: 364 YSLLIDAYSNAGRWESARIVLKEMEANNIMPNSYVFSRILASYRDRGEWQKSFQVLKEMK 423
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVD 254
G+ + N+++DT K ++ A F ++ S I P+ T+N I CK +
Sbjct: 424 NSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPDTVTWNTLIDCHCKAELHE 483
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
A+ +EM G PCV +++ +I S+ Q + V L+ M++ G PNVVTYTT++
Sbjct: 484 RAEELFEEMMEKGFSPCVTTFNIMINSFGEQERWDDVKTLMGNMRSLGLLPNVVTYTTLI 543
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
KSG F +AI E MK G KP S +N LI + ++AV +++ M + +
Sbjct: 544 DIYGKSGRFSDAIECLEDMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRL-MRADSL 602
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
P N++I F +AF VL+ M K KP+V T+ L+K+ + K ++
Sbjct: 603 KPSLLALNSLINAFGEDRRDAEAFSVLKYM-KENDLKPDVVTYTTLMKALIRVDKFNKVP 661
Query: 435 S 435
S
Sbjct: 662 S 662
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 162/339 (47%), Gaps = 9/339 (2%)
Query: 178 FSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPN 236
F+ AG A+ + GL T T+ ++ L G++ A ++F E+K + + P
Sbjct: 266 FAKAGDPNKAMEFLGMVQASGLSPRTATLIAVISALGDSGRIIEAEAIFEEMKDNGLKPK 325
Query: 237 AHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLD 296
+N + G+ K + +A++ + EM+ G P +YS +I +Y + +L
Sbjct: 326 TRAYNGLLKGYVKAGMLKDAEFIVSEMERSGVSPDECTYSLLIDAYSNAGRWESARIVLK 385
Query: 297 EMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRAS 356
EM+A PN ++ +++ G+++++ ++ ++MK G +PD F+N +I T G+ S
Sbjct: 386 EMEANNIMPNSYVFSRILASYRDRGEWQKSFQVLKEMKNSGVRPDRHFYNVMIDTFGKFS 445
Query: 357 RVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQT 416
+ A+ + +M G+ PDT T+NT+I HE+A + EEM + + P V T
Sbjct: 446 CLDHAMDTFD-KMLSEGIQPDTVTWNTLIDCHCKAELHERAEELFEEMME-KGFSPCVTT 503
Query: 417 FHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSL--DITTYTLVIHGLCRANKCEWAYLLF 474
F+ ++ S + + D+ + M N L L ++ TYT +I ++ + A
Sbjct: 504 FNIMINSFGEQERWDDVKTL----MGNMRSLGLLPNVVTYTTLIDIYGKSGRFSDAIECL 559
Query: 475 KEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
++M + P +++ QK + + A +M+
Sbjct: 560 EDMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRLMR 598
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 153/316 (48%), Gaps = 5/316 (1%)
Query: 170 TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL 229
T + ++ +S AG+WE A E+ + N+ + +L + G+ + + V E+
Sbjct: 363 TYSLLIDAYSNAGRWESARIVLKEMEANNIMPNSYVFSRILASYRDRGEWQKSFQVLKEM 422
Query: 230 K-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
K S + P+ H +N+ I + K + +D A T +M G P ++++T+I +C+
Sbjct: 423 KNSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPDTVTWNTLIDCHCKAELH 482
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
+ EL +EM +G P V T+ +++ + +++ + M+ +G P+ + L
Sbjct: 483 ERAEELFEEMMEKGFSPCVTTFNIMINSFGEQERWDDVKTLMGNMRSLGLLPNVVTYTTL 542
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
I G++ R +A+ + +M G+ P ++ +N +I ++ G E+A + M + +
Sbjct: 543 IDIYGKSGRFSDAIECLE-DMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRLM-RAD 600
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
KP++ + L+ + + + E S L + ++ L D+ TYT ++ L R +K
Sbjct: 601 SLKPSLLALNSLINAFGEDRRDAEAFSVL--KYMKENDLKPDVVTYTTLMKALIRVDKFN 658
Query: 469 WAYLLFKEMIGHDITP 484
+++EMI TP
Sbjct: 659 KVPSVYEEMILAGCTP 674
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 149/347 (42%), Gaps = 38/347 (10%)
Query: 205 TMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEA--QWTIQ 261
T N L++ + +E A ++ ++ P + +++ I + NR+D Q
Sbjct: 186 TYNALINACARNNDLEKAINLISRMRQDGYPSDFVNYSLIIQSLVRSNRIDSPILQKLYS 245
Query: 262 EMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSG 321
E++ V + II + + + +K E L +QA G P T V+S L SG
Sbjct: 246 EIQCDKLELDVQLSNDIIVGFAKAGDPNKAMEFLGMVQASGLSPRTATLIAVISALGDSG 305
Query: 322 DFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTF 381
EA I E+MK G KP +R +N L+ +A +++A ++ EM +GV+PD T+
Sbjct: 306 RIIEAEAIFEEMKDNGLKPKTRAYNGLLKGYVKAGMLKDAEFIVS-EMERSGVSPDECTY 364
Query: 382 NTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE--------- 432
+ +I +S+ G E A VL+EM + + PN F +L S G+ +
Sbjct: 365 SLLIDAYSNAGRWESARIVLKEM-EANNIMPNSYVFSRILASYRDRGEWQKSFQVLKEMK 423
Query: 433 ----------------------CLSQLLD--DMVNKHHLSLDITTYTLVIHGLCRANKCE 468
CL +D D + + D T+ +I C+A E
Sbjct: 424 NSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPDTVTWNTLIDCHCKAELHE 483
Query: 469 WAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
A LF+EM+ +P T ++++ ++ +D + + M+ L
Sbjct: 484 RAEELFEEMMEKGFSPCVTTFNIMINSFGEQERWDDVKTLMGNMRSL 530
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/342 (20%), Positives = 137/342 (40%), Gaps = 58/342 (16%)
Query: 59 VDSPRLPDIDVIISKV-HVGSSEDEVFQSLKQDHVCNA-----------------IQPSH 100
V + L D + I+S++ G S DE SL D NA I P+
Sbjct: 337 VKAGMLKDAEFIVSEMERSGVSPDECTYSLLIDAYSNAGRWESARIVLKEMEANNIMPNS 396
Query: 101 YLVNKLIHRFKD--DWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVR----QMDQMR 154
Y+ ++++ ++D +W+ + + + + G Y +M+D GK MD
Sbjct: 397 YVFSRILASYRDRGEWQKSFQVLKEMKNS-GVRPDRHFYNVMIDTFGKFSCLDHAMDTFD 455
Query: 155 ALLEEMSKGHIVTLNTIAK--------------------------------VMRRFSGAG 182
+L E + VT NT+ ++ F
Sbjct: 456 KMLSEGIQPDTVTWNTLIDCHCKAELHERAEELFEEMMEKGFSPCVTTFNIMINSFGEQE 515
Query: 183 QWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFN 241
+W+D + + GL N T L+D K G+ A ++KS + P++ +N
Sbjct: 516 RWDDVKTLMGNMRSLGLLPNVVTYTTLIDIYGKSGRFSDAIECLEDMKSAGLKPSSTMYN 575
Query: 242 IFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ 301
I+ + + ++A + M+ P +++ +++I ++ ++ + +L M+
Sbjct: 576 ALINAYAQKGLSEQAVNAFRLMRADSLKPSLLALNSLINAFGEDRRDAEAFSVLKYMKEN 635
Query: 302 GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSR 343
P+VVTYTT+M L + F + + E+M + G PD +
Sbjct: 636 DLKPDVVTYTTLMKALIRVDKFNKVPSVYEEMILAGCTPDRK 677
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 127/277 (45%), Gaps = 13/277 (4%)
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
++I IH + ++ EA Q+ P ++Y+ +I + R + K L+ M+
Sbjct: 157 YSILIHALGRSEKLYEAFLLSQQ---QALSP--LTYNALINACARNNDLEKAINLISRMR 211
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAI--RITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
G P + V Y+ ++ L +S + I ++ +++ + D + N +I +A
Sbjct: 212 QDGYPSDFVNYSLIIQSLVRSNRIDSPILQKLYSEIQCDKLELDVQLSNDIIVGFAKAGD 271
Query: 358 VQEAV-YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQT 416
+A+ ++ V+ +G++P T+T +I+ G +A + EEM K KP +
Sbjct: 272 PNKAMEFLGMVQ--ASGLSPRTATLIAVISALGDSGRIIEAEAIFEEM-KDNGLKPKTRA 328
Query: 417 FHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKE 476
++ LLK K G + ++ + + + +S D TY+L+I A + E A ++ KE
Sbjct: 329 YNGLLKGYVKAGMLKD--AEFIVSEMERSGVSPDECTYSLLIDAYSNAGRWESARIVLKE 386
Query: 477 MIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
M ++I P IL + + + + ++ MK
Sbjct: 387 MEANNIMPNSYVFSRILASYRDRGEWQKSFQVLKEMK 423
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 164/344 (47%), Gaps = 42/344 (12%)
Query: 196 TFGLEKNTETMNLLLDTLCKEGK-VELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRV 253
++G + N +LD + + + V++A +F E+ +S + PN +T+NI I G+C +
Sbjct: 160 SYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNL 219
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
+ EM+ +GC P V++Y+TII +YC+ + ++LL M +G PN+++Y V
Sbjct: 220 EMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVV 279
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
++ L + G +E I E+M PD FN LI +A+ V EM +NG
Sbjct: 280 INGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQAL-VLHAEMVKNG 338
Query: 374 VAPDTSTFNTMITM-----------------------------------FSHHGHHEKAF 398
++P+ T+ T+I FS G ++A+
Sbjct: 339 LSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAY 398
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
+++EM + P + T++ L+ G+ ++ S LL +M+ + + D+ +Y+ +I
Sbjct: 399 QIMKEMVE-NGFTPTIITYNALINGHCILGRMEDA-SGLLQEMIERGFIP-DVVSYSTII 455
Query: 459 HGLCRANKCEWAYLLFKEMIGHDITPRYQT-CRLILDEVKQKHM 501
G CR + E A+ L EM+ I+P T LI KQ+ +
Sbjct: 456 SGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRL 499
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 100/440 (22%), Positives = 200/440 (45%), Gaps = 15/440 (3%)
Query: 62 PRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIF 121
P + + I+ V ++ + + ++ V + + P+ Y N LI F +G+
Sbjct: 165 PGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLX 224
Query: 122 RWA-----GSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVM 175
+ G P + Y ++D K+R++ + LL M+ KG L + V+
Sbjct: 225 FFGEMERNGCLP----NVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVI 280
Query: 176 RRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIP 234
GQ ++ +E+ + T N L++ C G A + E+ K+ +
Sbjct: 281 NGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLS 340
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYEL 294
PN T+ I+ CK ++ A + +M+ G HP +Y+T+I + +Q + Y++
Sbjct: 341 PNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQI 400
Query: 295 LDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGR 354
+ EM G P ++TY +++ G E+A + ++M G PD ++ +I R
Sbjct: 401 MKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCR 460
Query: 355 ASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNV 414
+++A + +VEM G++PD +T++++I + + +EM L P+
Sbjct: 461 NQELEKA-FQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSL-GLPPDE 518
Query: 415 QTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLF 474
T+ L+ + G D+ L +L D+M+ K S DI TY ++I+G + ++ + A L
Sbjct: 519 VTYTSLINAYCIEGDLDKAL-RLHDEMIQK-GFSPDIVTYNVLINGFNKQSRTKEAKRLL 576
Query: 475 KEMIGHDITPRYQTCRLILD 494
+++ + P T ++D
Sbjct: 577 LKLLYEESVPNEITYNTLID 596
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 159/357 (44%), Gaps = 63/357 (17%)
Query: 164 HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELAR 223
++VT T+ M + AG A+ D++ GL N T L+D ++G ++ A
Sbjct: 342 NVVTYTTLINSMCK---AGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAY 398
Query: 224 SVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSY 282
+ E+ ++ P T+N I+G C + R+++A +QEM G P V+SYSTII +
Sbjct: 399 QIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGF 458
Query: 283 CRQYNFSKVYELLDEMQAQGC-----------------------------------PPNV 307
CR K ++L EM A+G PP+
Sbjct: 459 CRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDE 518
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
VTYT++++ GD ++A+R+ ++M G PD +N LI + SR +EA +
Sbjct: 519 VTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLK 578
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKT 427
+ E V P+ T+NT+I + N LE ++ L+K
Sbjct: 579 LLYEESV-PNEITYNTLI----------------DNCNNLEF-----KSALALMKGFCMK 616
Query: 428 GKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
G +E ++L+ M+ K + L+ Y ++IHG + E AY L+KEM+ P
Sbjct: 617 GLMNEA-DRVLESMLQKGY-KLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAP 671
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 130/274 (47%), Gaps = 5/274 (1%)
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE-L 294
++ F++ + ++N +++A + K +G P V+SY+ I+ + R K+ E +
Sbjct: 131 SSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGI 190
Query: 295 LDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGR 354
EM G PNV TY ++ +G+ E + +M+ G P+ +N +I +
Sbjct: 191 FKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCK 250
Query: 355 ASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNV 414
++ EA + ++ M G+ P+ ++N +I G ++ +LEEM+K + P+
Sbjct: 251 LRKIGEAFKLLRL-MALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYV-PDR 308
Query: 415 QTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLF 474
TF+ L+ G + L L +MV K+ LS ++ TYT +I+ +C+A A
Sbjct: 309 VTFNTLINGYCNVGNFHQALV-LHAEMV-KNGLSPNVVTYTTLINSMCKAGNLNRAMEFL 366
Query: 475 KEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+M + P +T ++D Q+ A +I
Sbjct: 367 DQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQI 400
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 9/185 (4%)
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRAS---RVQ 359
C + + V+ A+ +A+ I K G P +N ++ + R ++
Sbjct: 128 CKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIA 187
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
E ++ EM E+GV+P+ T+N +I F G+ E EM + C PNV T++
Sbjct: 188 EGIFK---EMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMER-NGCLPNVVTYNT 243
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
++ + K K E +LL M K L+ ++ +Y +VI+GLCR + + + +EM
Sbjct: 244 IIDAYCKLRKIGEAF-KLLRLMALK-GLNPNLISYNVVINGLCREGQMKETSEILEEMSK 301
Query: 480 HDITP 484
P
Sbjct: 302 RRYVP 306
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 185/378 (48%), Gaps = 12/378 (3%)
Query: 143 ILGKVRQMDQMRALLEEMSK-----GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTF 197
+L + +M Q + +SK G + T++ ++ FS + + A F ++
Sbjct: 100 LLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKL 159
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKINRVDE 255
GL+ + T N L++ LCK GK A F E C P +T+ I+G CKI
Sbjct: 160 GLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGC-QPTVYTYTTIINGLCKIGETTA 218
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
A ++M+ GC P V++Y+ +I S C+ ++ ++ M+A+ P++ TY +++
Sbjct: 219 AAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQ 278
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
L ++EA + +M + P+ FN L+ + + +V EA V++ M E GV
Sbjct: 279 GLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKT-MTEMGVE 337
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS 435
PD T+++++ +S +A + + M + CKP+ +++ L+K K + DE
Sbjct: 338 PDVVTYSSLMYGYSLRMEIVEARKLFDAMIT-KGCKPDAFSYNILIKGYCKAKRIDEA-K 395
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE 495
QL ++M+++ L+ D Y +IHGLC+ + A LFK M + P T ++LD
Sbjct: 396 QLFNEMIHQG-LTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDG 454
Query: 496 VKQKHMYDAAEKIEAVMK 513
++ A ++ VM+
Sbjct: 455 FCKEGYLGKAFRLFRVMQ 472
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 175/379 (46%), Gaps = 6/379 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G + + + +++ L KV + Q ++ + G T+ T ++ G+ A
Sbjct: 160 GLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAA 219
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHG 246
F ++ G + N T N+L+D+LCK+ V A +F +K+ I P+ T+N I G
Sbjct: 220 AGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQG 279
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C R EA + EM P + +++ ++ + C++ S+ + M G P+
Sbjct: 280 LCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPD 339
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
VVTY+++M + + EA ++ + M G KPD+ +N LI +A R+ EA ++
Sbjct: 340 VVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFN 399
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
EM G+ PD +NT+I G +A + + M+ + P++ T+ LL K
Sbjct: 400 -EMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNL-PDLFTYSMLLDGFCK 457
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
G + L ++ +L DI Y ++I +C+ + A LF E+ + P
Sbjct: 458 EGYLGKAFR--LFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNV 515
Query: 487 QTCRLILDEVKQKHMYDAA 505
Q I++ + ++ + D A
Sbjct: 516 QIYTTIINNLCKEGLLDEA 534
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 122/265 (46%), Gaps = 7/265 (2%)
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCR--QYNFSKVYELLDEMQAQGCPPNVVTY 310
+D+A + M PC+I ++ ++ + + QY + V L +M+ G P++ T
Sbjct: 75 IDDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQY-YGAVISLSKQMELAGLSPDIYTL 133
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
+ ++ + + A + KM +G +PD+ FN LI L + + +AV + +
Sbjct: 134 SILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFD-DFE 192
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKT 430
+G P T+ T+I G A + ++M + C+PNV T++ L+ S K
Sbjct: 193 ASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEE-AGCQPNVVTYNILIDSLCKDKLV 251
Query: 431 DECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCR 490
+E L + + +S DI TY +I GLC + + A L EM +I P T
Sbjct: 252 NEALD--IFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFN 309
Query: 491 LILDEVKQKHMYDAAEKIEAVMKKL 515
+++D + ++ A+ + M ++
Sbjct: 310 VLVDAICKEGKVSEAQGVFKTMTEM 334
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 128/293 (43%), Gaps = 40/293 (13%)
Query: 96 IQPSHYLVNKLIHRFKD--DWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQM 153
I P + N LI + WK A + S + + ++VD + K ++ +
Sbjct: 266 ISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSL-NIMPNIFTFNVLVDAICKEGKVSEA 324
Query: 154 RALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDT 212
+ + + M++ G + T + +M +S + +A + FD + T G + + + N+L+
Sbjct: 325 QGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKG 384
Query: 213 LCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPC 271
CK +++ A+ +F E+ + P+ +N IHG C++ R+ EAQ + M +G P
Sbjct: 385 YCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPD 444
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQA------------------------------- 300
+ +YS ++ +C++ K + L MQ+
Sbjct: 445 LFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFS 504
Query: 301 ----QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
QG PNV YTT+++ L K G +EA+ M+ G PD +N +I
Sbjct: 505 ELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVII 557
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 89/177 (50%), Gaps = 2/177 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ L ++ ++ + + L + M S G++ L T + ++ F G A R F +
Sbjct: 413 YNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQ 472
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
+ L+ + N+L+D +CK G ++ AR +F EL + PN + I+ CK +D
Sbjct: 473 STYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLD 532
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
EA + M+G GC P SY+ II+ + + + S+ +L+ EM+ +G T T
Sbjct: 533 EALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFVAEAGTTT 589
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 96/206 (46%), Gaps = 8/206 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y +++ K +++D+ + L EM + V NT+ + + G+ +A F
Sbjct: 378 YNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQL---GRLREAQDLFK 434
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKIN 251
+ + G + T ++LLD CKEG + A +F ++S + P+ +NI I CK
Sbjct: 435 NMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFG 494
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
+ +A+ E+ G P V Y+TII + C++ + E M+ GCPP+ +Y
Sbjct: 495 NLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYN 554
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVG 337
++ + D A ++ +M+ G
Sbjct: 555 VIIRGFLQYKDESRAAQLIGEMRDRG 580
>gi|224088774|ref|XP_002308534.1| predicted protein [Populus trichocarpa]
gi|222854510|gb|EEE92057.1| predicted protein [Populus trichocarpa]
Length = 567
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 207/421 (49%), Gaps = 23/421 (5%)
Query: 99 SHYLVNKLI--HRFKDDWKSALGIFRWAGSCPGYEHSSEIY--EMMVDILGKVRQMDQMR 154
S LV+KLI + + D KSA IF W + ++ ++ +L KV Q++ +
Sbjct: 128 SDLLVSKLIRAYGYSGDTKSA--IF-WFHKVKEIQQGKCLFSWNAILGVLVKVNQINVAK 184
Query: 155 ALLEEMSKGHIVT--LNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDT 212
+ +++ +V +T ++R F G ++A + FDE+ E N T N L++
Sbjct: 185 SFFDQIVNDAVVKPDASTYTTMIRGFCKVGMIDNARKVFDEMIC---EPNLITCNTLING 241
Query: 213 LCKEGKVELARSVFL----ELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGC 268
CK+G +E AR +FL E K C+P T++ I G+CK ++EA+ + M GC
Sbjct: 242 YCKKGDMENAR-IFLCRMMESKDCLPDTV-TYSTLIDGYCKKGELNEARKWMDGMLIRGC 299
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
+P + +Y+ II C + N + LL +M+ G NV T+ +++ L+ +G EEAI
Sbjct: 300 NPNLWTYNAIIYGLCLRGNVDEARRLLTKMRLNGVKENVATHLSILKGLSVAGKSEEAIG 359
Query: 329 ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF 388
+M G K D++ +I + + EA+ + + EM G++ +FN ++ +
Sbjct: 360 YFSEMIRKGMKLDAKEHEVVITAYCKMRKPDEAISLLK-EMQAKGISRSVGSFNAVLRIL 418
Query: 389 SHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS-CFKTGKTDECLSQLLDDMVNKHHL 447
G +KA +L+++ + C PN+ ++ ++ C G+ E ++ L+DDM+ +
Sbjct: 419 VEIGELDKAVLLLKQVKNM-GCLPNLVSYSTVICGLCRSHGRMQE-VAGLVDDML-QDGF 475
Query: 448 SLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEK 507
+D T Y+ ++ G C A E A F + I + Q+ ++ + K AE+
Sbjct: 476 EMDATLYSCLVGGFCEAGNEEMAMRAFYDSINKNYVINLQSFSFFVNLMCGKGKVIEAEQ 535
Query: 508 I 508
I
Sbjct: 536 I 536
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 5/194 (2%)
Query: 320 SGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTS 379
SGD + AI K+K + +N ++ L + +++ A + + + V PD S
Sbjct: 142 SGDTKSAIFWFHKVKEIQQGKCLFSWNAILGVLVKVNQINVAKSFFDQIVNDAVVKPDAS 201
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLD 439
T+ TMI F G + A V +EM C+PN+ T + L+ K G + L
Sbjct: 202 TYTTMIRGFCKVGMIDNARKVFDEM----ICEPNLITCNTLINGYCKKGDMENARIFLCR 257
Query: 440 DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQK 499
M +K L D TY+ +I G C+ + A M+ P T I+ + +
Sbjct: 258 MMESKDCLP-DTVTYSTLIDGYCKKGELNEARKWMDGMLIRGCNPNLWTYNAIIYGLCLR 316
Query: 500 HMYDAAEKIEAVMK 513
D A ++ M+
Sbjct: 317 GNVDEARRLLTKMR 330
>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
Length = 504
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 170/360 (47%), Gaps = 5/360 (1%)
Query: 156 LLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK 215
L + M G L T ++ F + EDA+ FD++ G N T L+ LCK
Sbjct: 140 LGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCK 199
Query: 216 EGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVIS 274
+ A +F ++ + I PN T+N + G C+I R +A W +++M G P VI+
Sbjct: 200 NRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVIT 259
Query: 275 YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
++ +I ++ + + EL M P+V TYT +++ L G +EA ++ M+
Sbjct: 260 FTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLME 319
Query: 335 IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHH 394
G P+ + LI+ ++ RV++ ++ EM + G+ +T T+ +I + G
Sbjct: 320 SNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFY-EMSQKGLVANTITYTVLIQGYCLVGRP 378
Query: 395 EKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTY 454
+ A V +M P+++T++ LL G ++ L ++ + K + ++I TY
Sbjct: 379 DVAQEVFNQMGS-RRAPPDIRTYNVLLDGLCYNGYVEKAL--MIFKYMRKREMDINIVTY 435
Query: 455 TLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
T++I G+C+ K E A+ LF + + P T ++ ++ A+ + MK+
Sbjct: 436 TIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKE 495
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 172/352 (48%), Gaps = 20/352 (5%)
Query: 168 LNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFL 227
L+ IAK M+RF + + F+++ G+ T N++++ +C+ + A S FL
Sbjct: 89 LSVIAK-MKRF------DVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRA-SCFL 140
Query: 228 E--LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQ 285
+K P+ TF +HG+C NR+++A ++ G G P V++Y+T+I C+
Sbjct: 141 GKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKN 200
Query: 286 YNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFF 345
+ + E+ ++M G PNVVTY +++S L + G + +A + M G +P+ F
Sbjct: 201 RHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITF 260
Query: 346 NCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKA---FHVLE 402
LI + ++ EA +Y+V M + V PD T+ +I +G ++A F+++E
Sbjct: 261 TALIDAFVKVGKIMEAKELYKV-MIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLME 319
Query: 403 EMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC 462
PN T+ L+ K+ + ++ +++ +M K L + TYT++I G C
Sbjct: 320 S----NGYYPNEVTYTTLIHGFCKSKRVEDG-TKIFYEMSQK-GLVANTITYTVLIQGYC 373
Query: 463 RANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
+ + A +F +M P +T ++LD + + A I M+K
Sbjct: 374 LVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRK 425
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 101/198 (51%), Gaps = 3/198 (1%)
Query: 145 GKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTE 204
G++ + QM L+E S G+ T ++ F + + ED + F E+ GL NT
Sbjct: 306 GRLDEARQMFYLME--SNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTI 363
Query: 205 TMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
T +L+ C G+ ++A+ VF ++ S PP+ T+N+ + G C V++A + M
Sbjct: 364 TYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYM 423
Query: 264 KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF 323
+ +++Y+ IIQ C+ ++L + ++G PNV+TYTT++S + G
Sbjct: 424 RKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFI 483
Query: 324 EEAIRITEKMKIVGSKPD 341
EA + +KMK G P+
Sbjct: 484 HEADALFKKMKEDGFLPN 501
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 129/273 (47%), Gaps = 5/273 (1%)
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYEL 294
P+ F + K+ R D ++M+ G P + + + ++ CR +
Sbjct: 80 PSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCF 139
Query: 295 LDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGR 354
L +M G P++VT+T+++ E+A+ + +++ +G +P+ + LI+ L +
Sbjct: 140 LGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCK 199
Query: 355 ASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNV 414
+ AV ++ +M +NG+ P+ T+N++++ G A +L +M K +PNV
Sbjct: 200 NRHLNHAVEIFN-QMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMK-RGIQPNV 257
Query: 415 QTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLF 474
TF L+ + K GK E ++ L ++ + + D+ TYT +I+GLC + + A +F
Sbjct: 258 ITFTALIDAFVKVGKIME--AKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMF 315
Query: 475 KEMIGHDITPRYQT-CRLILDEVKQKHMYDAAE 506
M + P T LI K K + D +
Sbjct: 316 YLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTK 348
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 126/291 (43%), Gaps = 6/291 (2%)
Query: 94 NAIQPSHYLVNKLIHRFKD--DWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMD 151
N I+P+ N L+ + W A + R G + + + ++D KV ++
Sbjct: 216 NGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMK-RGIQPNVITFTALIDAFVKVGKIM 274
Query: 152 QMRALLEEMSKGHIVT-LNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLL 210
+ + L + M + + + T ++ G+ ++A + F + + G N T L+
Sbjct: 275 EAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLI 334
Query: 211 DTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCH 269
CK +VE +F E+ + + N T+ + I G+C + R D AQ +M
Sbjct: 335 HGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAP 394
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI 329
P + +Y+ ++ C K + M+ + N+VTYT ++ + K G E+A +
Sbjct: 395 PDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDL 454
Query: 330 TEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTST 380
+ G KP+ + +I R + EA +++ +M E+G P+ S
Sbjct: 455 FCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFK-KMKEDGFLPNESV 504
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 115/244 (47%), Gaps = 11/244 (4%)
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
+Y I+++ F++ +L M P++V +T ++S +AK F+ I + E+M
Sbjct: 49 NYRKILRNGLHNLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQM 108
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
+I+G P N ++ + R+S+ A + +M + G PD TF +++ F H
Sbjct: 109 QILGISPVLYTCNIVMNCVCRSSQPCRAS-CFLGKMMKLGFEPDLVTFTSLLHGFCHWNR 167
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD---ECLSQLLDDMVNKHHLSLD 450
E A + +++ + +PNV T+ L+ K + E +Q+ D+ + +
Sbjct: 168 IEDALALFDQIVGMGF-RPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRP-----N 221
Query: 451 ITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE-VKQKHMYDAAEKIE 509
+ TY ++ GLC + A L ++M+ I P T ++D VK + +A E +
Sbjct: 222 VVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYK 281
Query: 510 AVMK 513
+++
Sbjct: 282 VMIQ 285
>gi|297844848|ref|XP_002890305.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336147|gb|EFH66564.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 860
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 182/370 (49%), Gaps = 19/370 (5%)
Query: 66 DIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAG 125
++ ++ + G + +E Q+L ++ Y N+++ + +D+ +ALG F W
Sbjct: 304 NVSSVLRRFRWGPAAEEALQNL-------GLRIDAYQANQVLKQM-NDYGNALGFFYWLK 355
Query: 126 SCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKG----HIVTLNTIAKVMRRFSGA 181
PG++H Y MV LG+ +Q + LL+EM + + VT N +++ + A
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYN---RLIHSYGRA 412
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTF 240
+A+ F+++ G + + T L+D K G +++A ++ +++ + P+ T+
Sbjct: 413 NYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTY 472
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
++ I+ K + A EM GC P +++Y+ ++ + + N+ +L +MQ
Sbjct: 473 SVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQSALKLYRDMQN 532
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
G P+ VTY+ VM L G EEA + +M+ PD + L+ G+A V++
Sbjct: 533 AGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEK 592
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
A YQ M G+ P+ T N++++ F +A+ +L+ M L +P++QT+ L
Sbjct: 593 AWQWYQA-MLHAGLLPNVPTCNSLLSTFLRVNKIAEAYELLQNMLAL-GLRPSLQTYT-L 649
Query: 421 LKSCFKTGKT 430
L SC G++
Sbjct: 650 LLSCCTDGRS 659
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 154/333 (46%), Gaps = 13/333 (3%)
Query: 161 SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVE 220
+ G+IV ++ V+RRF +W A + L GL + N +L + G
Sbjct: 297 NSGYIV--ENVSSVLRRF----RWGPAAE--EALQNLGLRIDAYQANQVLKQMNDYGNA- 347
Query: 221 LARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQ 280
L +L+ + + HT+ + + + + EM GC P ++Y+ +I
Sbjct: 348 LGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIH 407
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
SY R ++ + ++MQ GC P+ VTY T++ AK+G + A+ + ++M+ G P
Sbjct: 408 SYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSP 467
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
D+ ++ +I LG+A + A ++ EM + G P+ T+N M+ + + +++ A +
Sbjct: 468 DTFTYSVIINCLGKAGHLPAAHKLF-CEMVDQGCTPNLVTYNIMMDLHAKARNYQSALKL 526
Query: 401 LEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHG 460
+M +P+ T+ +++ G +E + +M K+ + D Y L++
Sbjct: 527 YRDMQNAGF-EPDKVTYSIVMEVLGHCGYLEEA-EAVFTEMQQKNWIP-DEPVYGLLVDL 583
Query: 461 LCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
+A E A+ ++ M+ + P TC +L
Sbjct: 584 WGKAGNVEKAWQWYQAMLHAGLLPNVPTCNSLL 616
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 10/175 (5%)
Query: 337 GSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEK 396
G K D + ++ LGRA + A+ EM +G P+T T+N +I + + +
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFG-AINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNE 417
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHH---LSLDITT 453
A +V +M + CKP+ T+ L+ K G D + DM + LS D T
Sbjct: 418 AMNVFNQMQE-AGCKPDRVTYCTLIDIHAKAGFLDIAM-----DMYQRMQAGGLSPDTFT 471
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
Y+++I+ L +A A+ LF EM+ TP T +++D + Y +A K+
Sbjct: 472 YSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQSALKL 526
>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
Length = 481
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 165/332 (49%), Gaps = 18/332 (5%)
Query: 156 LLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG-TFGLEKNTETMNLLLDTLC 214
LL +M + + VT NT V+ F G+ + A+ E+ G+ + T L+ C
Sbjct: 138 LLRQMPRPNAVTYNT---VIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWC 194
Query: 215 KEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCV 272
K G++E A VF E+ + + P+A +N I G+C ++D A ++M G V
Sbjct: 195 KIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVALQYREDMVQRGVAMTV 254
Query: 273 ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEK 332
+Y+ ++ + S Y +L+EMQ G P+V TY +++ K G+ ++A+ + E+
Sbjct: 255 ATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEVFEE 314
Query: 333 MKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
M G + + + LIY R +VQE +++V + + G+ PD +N +I G
Sbjct: 315 MSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAV-KKGIRPDVVMYNALINSHCAGG 373
Query: 393 HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
E+AF ++ EM K + P+ T++ L++ G+ DE L+D+M K + D+
Sbjct: 374 DMERAFEIMAEMEK-KRIPPDDVTYNTLIRGFCLLGRLDEA-RGLIDEM-TKRGIQPDL- 429
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
GLC+ + + A L KEM+G ITP
Sbjct: 430 -------GLCKNGQGDDAENLMKEMVGKGITP 454
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 140/282 (49%), Gaps = 14/282 (4%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETM-NLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHT 239
G+ EDA + FDE+ T G + M N L+ C GK+++A ++ + + T
Sbjct: 197 GRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVALQYREDMVQRGVAMTVAT 256
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+N+ +H R +A ++EM+ +G P V +Y+ +I YC++ N K E+ +EM
Sbjct: 257 YNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEVFEEMS 316
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
+G VTYT+++ ++ G +E R+ + G +PD +N LI + ++
Sbjct: 317 RKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCAGGDME 376
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
A + EM + + PD T+NT+I F G ++A +++EM K + P
Sbjct: 377 RAFEI-MAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTK--------RGIQP 427
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGL 461
L C K G+ D+ L+ +MV K ++ D +TY +I GL
Sbjct: 428 DLGLC-KNGQGDDA-ENLMKEMVGK-GITPDDSTYISLIEGL 466
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 133/285 (46%), Gaps = 11/285 (3%)
Query: 203 TETMNLLLDTLCKEGKVELARSVFLELKSCIP-PNAHTFNIFIHGWCKINRVDEAQWTIQ 261
T T N++L LC GK A LEL +P PNA T+N I G+C RV A ++
Sbjct: 116 TTTFNIMLRHLCATGKPVRA----LELLRQMPRPNAVTYNTVIAGFCARGRVQAALEVMR 171
Query: 262 EMKGH-GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG-CPPNVVTYTTVMSYLAK 319
EM+ G P +Y+T+I +C+ ++ DEM QG P+ V Y ++
Sbjct: 172 EMRERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCD 231
Query: 320 SGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTS 379
G + A++ E M G +N L++ L R +A V + EM NG++PD
Sbjct: 232 RGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLE-EMQRNGLSPDVF 290
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLD 439
T+N +I + G+ +KA V EEM++ + + T+ L+ + + G+ E + L
Sbjct: 291 TYNILINGYCKEGNEKKALEVFEEMSR-KGVRATAVTYTSLIYAFSRKGQVQE--TDRLF 347
Query: 440 DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
+ K + D+ Y +I+ C E A+ + EM I P
Sbjct: 348 KVAVKKGIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPP 392
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 96/207 (46%), Gaps = 13/207 (6%)
Query: 288 FSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNC 347
F+ +Y L P T+ ++ +L +G A+ + +M +P++ +N
Sbjct: 104 FADIYRLR-------LPLCTTTFNIMLRHLCATGKPVRALELLRQM----PRPNAVTYNT 152
Query: 348 LIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKL 407
+I RVQ A+ V + G+APD T+ T+I+ + G E A V +EM
Sbjct: 153 VIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQ 212
Query: 408 EHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKC 467
P+ ++ L+ GK D L Q +DMV + +++ + TY L++H L +
Sbjct: 213 GEVAPSAVMYNALIGGYCDRGKLDVAL-QYREDMVQR-GVAMTVATYNLLVHALFMDGRA 270
Query: 468 EWAYLLFKEMIGHDITPRYQTCRLILD 494
AY + +EM + ++P T ++++
Sbjct: 271 SDAYAVLEEMQRNGLSPDVFTYNILIN 297
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 124/283 (43%), Gaps = 18/283 (6%)
Query: 76 VGSSED--EVF-QSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGI-FRWAGSCPGYE 131
+G ED +VF + L Q V PS + N LI + D K + + +R G
Sbjct: 196 IGRMEDAAKVFDEMLTQGEVA----PSAVMYNALIGGYCDRGKLDVALQYREDMVQRGVA 251
Query: 132 HSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRT 190
+ Y ++V L + A+LEEM + G + T ++ + G + A+
Sbjct: 252 MTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEV 311
Query: 191 FDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCK 249
F+E+ G+ T L+ ++G+V+ +F + +K I P+ +N I+ C
Sbjct: 312 FEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCA 371
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
++ A + EM+ P ++Y+T+I+ +C + L+DEM +G P++
Sbjct: 372 GGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRGIQPDL-- 429
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
L K+G ++A + ++M G PD + LI L
Sbjct: 430 ------GLCKNGQGDDAENLMKEMVGKGITPDDSTYISLIEGL 466
>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 194/408 (47%), Gaps = 17/408 (4%)
Query: 97 QPSHYLVNKLIHRF-----KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMD 151
QP + N LI+ F DD L R P + Y +M+ L ++D
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSP----DTVTYNIMIGSLCSRGKLD 210
Query: 152 -QMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLL 210
++ L + +S T+ T ++ G ++A++ DE+ + GL+ + T N ++
Sbjct: 211 LALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTII 270
Query: 211 DTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGC 268
+CKEG V+ A + LELK P+ ++NI + + +E + + +M C
Sbjct: 271 RGMCKEGMVDRAFEMVRNLELKGS-EPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC 329
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
P V++YS +I + CR + LL M+ +G P+ +Y +++ + G + AI
Sbjct: 330 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE 389
Query: 329 ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF 388
E M G PD +N ++ TL + + +A+ ++ ++ E G +P++S++NTM +
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFG-KLGEVGCSPNSSSYNTMFSAL 448
Query: 389 SHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
G +A H++ EM P+ T++ ++ + G DE L+D + H S
Sbjct: 449 WSSGDKIRALHMILEMMS-NGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPS 507
Query: 449 LDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV 496
+ TY +V+ G C+A++ E A + + M+G+ P T ++++ +
Sbjct: 508 --VVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/394 (24%), Positives = 181/394 (45%), Gaps = 44/394 (11%)
Query: 156 LLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK 215
+LE+ + + N + + F + +DA R D + + +T T N+++ +LC
Sbjct: 149 ILEKFGQPDVFAYNAL---INGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCS 205
Query: 216 EGKVELARSVFLELKS--CIP----------------------------------PNAHT 239
GK++LA V +L S C P P+ T
Sbjct: 206 RGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFT 265
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+N I G CK VD A ++ ++ G P VISY+ ++++ Q + + +L+ +M
Sbjct: 266 YNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMF 325
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
++ C PNVVTY+ +++ L + G EEA+ + + MK G PD+ ++ LI R R+
Sbjct: 326 SEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLD 385
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
A+ + M +G PD +NT++ +G ++A + ++ ++ C PN +++
Sbjct: 386 VAIEFLET-MISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEV-GCSPNSSSYNT 443
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
+ + + +G L +L+ M N + D TY +I LCR + A+ L +M
Sbjct: 444 MFSALWSSGDKIRALHMILEMMSN--GIDPDEITYNSMISCLCREGMVDEAFELLVDMRS 501
Query: 480 HDITPRYQTCRLILDEVKQKH-MYDAAEKIEAVM 512
+ P T ++L + H + DA +E+++
Sbjct: 502 CEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMV 535
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 113/231 (48%), Gaps = 8/231 (3%)
Query: 137 YEMMVDIL---GKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDE 193
Y +++ L GK+ + + L++E KG + ++ F G+ + A+ +
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKE--KGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 393
Query: 194 LGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFN-IFIHGWCKIN 251
+ + G + N +L TLCK GK + A +F +L PN+ ++N +F W +
Sbjct: 394 MISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGD 453
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
++ A I EM +G P I+Y+++I CR+ + +ELL +M++ P+VVTY
Sbjct: 454 KI-RALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYN 512
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
V+ K+ E+AI + E M G +P+ + LI +G A EA+
Sbjct: 513 IVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAM 563
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 91/199 (45%), Gaps = 2/199 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y+ ++ + ++D LE M S G + + V+ G+ + A+ F +LG
Sbjct: 371 YDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLG 430
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVD 254
G N+ + N + L G A + LE+ S I P+ T+N I C+ VD
Sbjct: 431 EVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVD 490
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA + +M+ HP V++Y+ ++ +C+ + +L+ M GC PN TYT ++
Sbjct: 491 EAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLI 550
Query: 315 SYLAKSGDFEEAIRITEKM 333
+ +G EA+ + +
Sbjct: 551 EGIGFAGYRAEAMELANDL 569
>gi|334182677|ref|NP_001185030.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332191659|gb|AEE29780.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 886
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 182/370 (49%), Gaps = 19/370 (5%)
Query: 66 DIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAG 125
++ ++ + G + +E Q+L ++ Y N+++ + +D+ +ALG F W
Sbjct: 304 NVSSVLRRFRWGPAAEEALQNL-------GLRIDAYQANQVLKQM-NDYGNALGFFYWLK 355
Query: 126 SCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKG----HIVTLNTIAKVMRRFSGA 181
PG++H Y MV LG+ +Q + LL+EM + + VT N +++ + A
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYN---RLIHSYGRA 412
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTF 240
+A+ F+++ G + + T L+D K G +++A ++ +++ + P+ T+
Sbjct: 413 NYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTY 472
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
++ I+ K + A EM GC P +++Y+ ++ + + N+ +L +MQ
Sbjct: 473 SVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQN 532
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
G P+ VTY+ VM L G EEA + +M+ PD + L+ G+A V++
Sbjct: 533 AGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEK 592
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
A YQ M G+ P+ T N++++ F +A+ +L+ M L +P++QT+ L
Sbjct: 593 AWQWYQA-MLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLAL-GLRPSLQTYT-L 649
Query: 421 LKSCFKTGKT 430
L SC G++
Sbjct: 650 LLSCCTDGRS 659
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 154/333 (46%), Gaps = 13/333 (3%)
Query: 161 SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVE 220
+ GHIV ++ V+RRF +W A + L GL + N +L + G
Sbjct: 297 NSGHIV--ENVSSVLRRF----RWGPAAE--EALQNLGLRIDAYQANQVLKQMNDYGNA- 347
Query: 221 LARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQ 280
L +L+ + + HT+ + + + + EM GC P ++Y+ +I
Sbjct: 348 LGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIH 407
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
SY R ++ + ++MQ GC P+ VTY T++ AK+G + A+ + ++M+ G P
Sbjct: 408 SYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSP 467
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
D+ ++ +I LG+A + A ++ EM + G P+ T+N M+ + + +++ A +
Sbjct: 468 DTFTYSVIINCLGKAGHLPAAHKLF-CEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKL 526
Query: 401 LEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHG 460
+M +P+ T+ +++ G +E + +M K+ + D Y L++
Sbjct: 527 YRDMQNAGF-EPDKVTYSIVMEVLGHCGYLEEA-EAVFTEMQQKNWIP-DEPVYGLLVDL 583
Query: 461 LCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
+A E A+ ++ M+ + P TC +L
Sbjct: 584 WGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLL 616
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 81/175 (46%), Gaps = 10/175 (5%)
Query: 337 GSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEK 396
G K D + ++ LGRA + A+ EM +G P+T T+N +I + + +
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFG-AINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNE 417
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHH---LSLDITT 453
A +V +M + CKP+ T+ L+ K G D + DM + LS D T
Sbjct: 418 AMNVFNQMQE-AGCKPDRVTYCTLIDIHAKAGFLDIAM-----DMYQRMQAGGLSPDTFT 471
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
Y+++I+ L +A A+ LF EM+ TP T +++D + Y A K+
Sbjct: 472 YSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKL 526
>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 171/376 (45%), Gaps = 17/376 (4%)
Query: 117 ALGIFRWAGSCPGYEHSSEI--YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAK 173
A+G+ R G S +I Y +++ L K +++ + LL EM + G T
Sbjct: 17 AMGLIREMGR---KSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTT 73
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSC 232
+M G+ ++A+ + + G + + L+ C G ++ + +F E L
Sbjct: 74 LMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKG 133
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
I N T++ +HG C++ + EA + M HG HP V++Y+ +I C+ +
Sbjct: 134 ISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAM 193
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
+LL+ M +G P+ VTY ++S L K G +A +I M G K D +N L+ L
Sbjct: 194 DLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGL 253
Query: 353 GRASRVQEAVYVYQVEMP-ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCK 411
+V EA+ ++ EN + P+ TFN +I G KA + +M K C
Sbjct: 254 CDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSC- 312
Query: 412 PNVQTFHPLLKSCFKTGKTDECL---SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
N+ T++ LL C K GK E + Q+LD + TY+++I G C+
Sbjct: 313 GNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSF-----TYSILIDGFCKMRMLN 367
Query: 469 WAYLLFKEMIGHDITP 484
A LF EM H + P
Sbjct: 368 IAKGLFCEMRTHGLNP 383
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 157/314 (50%), Gaps = 10/314 (3%)
Query: 168 LNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFL 227
+N + K + R G + +R E+G + + + N L++ LCK K++ A + L
Sbjct: 1 MNIVLKGLCRNGGVFEAMGLIR---EMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLL 57
Query: 228 ELKS--CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQ 285
E+++ C PN+ T + G CK R+DEA ++ MK G V+ Y T+I +C
Sbjct: 58 EMEAAGCF-PNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNN 116
Query: 286 YNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFF 345
N + EL DEM +G NVVTY+ ++ L + G ++EA + M G PD +
Sbjct: 117 GNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTY 176
Query: 346 NCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMN 405
LI L + R A+ + + M E G P T+N +++ G AF +L M
Sbjct: 177 TGLIDGLCKDGRATHAMDLLNL-MVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMI 235
Query: 406 KLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMV-NKHHLSLDITTYTLVIHGLCRA 464
+ + K +V T++ L+K GK DE L +L + M N++ L ++ T+ ++I GLC+
Sbjct: 236 E-KGKKADVVTYNTLMKGLCDKGKVDEAL-KLFNSMFDNENCLEPNVFTFNMLIGGLCKE 293
Query: 465 NKCEWAYLLFKEMI 478
+ A + ++M+
Sbjct: 294 GRLTKAVKIHRKMV 307
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 151/312 (48%), Gaps = 7/312 (2%)
Query: 206 MNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
MN++L LC+ G V A + E+ + + P+ ++N I+G CK ++ EA + EM+
Sbjct: 1 MNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEME 60
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
GC P ++ +T++ C+ + ELL+ M+ +G +VV Y T++S +G+ +
Sbjct: 61 AAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLD 120
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTM 384
+ ++M G + ++CL++ L R + +EA V M E+G+ PD T+ +
Sbjct: 121 RGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNA-MAEHGIHPDVVTYTGL 179
Query: 385 ITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK 444
I G A +L M + +P+ T++ LL K G + ++L M+ K
Sbjct: 180 IDGLCKDGRATHAMDLLNLMVEKGE-EPSNVTYNVLLSGLCKEGLVIDAF-KILRMMIEK 237
Query: 445 HHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHD--ITPRYQTCRLILDEVKQKHMY 502
+ D+ TY ++ GLC K + A LF M ++ + P T +++ + ++
Sbjct: 238 GKKA-DVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRL 296
Query: 503 DAAEKIEAVMKK 514
A KI M K
Sbjct: 297 TKAVKIHRKMVK 308
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 149/318 (46%), Gaps = 46/318 (14%)
Query: 129 GYEHSSEIYEMMVDILGK----VRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQW 184
G E S+ Y +++ L K + +R ++E+ K +VT NT+ M+ G+
Sbjct: 203 GEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTL---MKGLCDKGKV 259
Query: 185 EDAVRTFDEL--GTFGLEKNTETMNLLLDTLCKEGKVELARSVF---------------- 226
++A++ F+ + LE N T N+L+ LCKEG++ A +
Sbjct: 260 DEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYN 319
Query: 227 LELKSCIP--------------------PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
+ L C+ PN+ T++I I G+CK+ ++ A+ EM+ H
Sbjct: 320 MLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTH 379
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
G +P + Y+T++ S C++ + + L EM C P+++++ T++ K+GDF+
Sbjct: 380 GLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFV 439
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
+ KM +G +PD+ F+ LI L + + EA + M +G PD +++++
Sbjct: 440 KELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALE-RMVASGFTPDALVYDSLLK 498
Query: 387 MFSHHGHHEKAFHVLEEM 404
S G + ++L +M
Sbjct: 499 GLSSKGDTTEIINLLHQM 516
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 116/480 (24%), Positives = 193/480 (40%), Gaps = 60/480 (12%)
Query: 33 SHIVSSSPIESYCSDGARLDHHQVLCVDSPRLPDIDVIISKVHVGS--------SEDEVF 84
+ + ++ ++ C DG + ++L + D DV++ + E+F
Sbjct: 67 NSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELF 126
Query: 85 QSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDIL 144
+ + + LV+ L WK A + A + G Y ++D L
Sbjct: 127 DEMLGKGISANVVTYSCLVHGLCRL--GQWKEANTVLN-AMAEHGIHPDVVTYTGLIDGL 183
Query: 145 GK----VRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLE 200
K MD + ++E+ + VT N + + G DA + + G +
Sbjct: 184 CKDGRATHAMDLLNLMVEKGEEPSNVTYNVL---LSGLCKEGLVIDAFKILRMMIEKGKK 240
Query: 201 KNTETMNLLLDTLCKEGKVELARSVF---LELKSCIPPNAHTFNIFIHGWCKINRVDEAQ 257
+ T N L+ LC +GKV+ A +F + ++C+ PN TFN+ I G CK R+ +A
Sbjct: 241 ADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAV 300
Query: 258 WTIQEM--KGH------------GCH---------------------PCVISYSTIIQSY 282
++M KG GC P +YS +I +
Sbjct: 301 KIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGF 360
Query: 283 CRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDS 342
C+ + L EM+ G P + Y T+M+ L K G E+A + ++M +PD
Sbjct: 361 CKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDI 420
Query: 343 RFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLE 402
FN +I +A Q V Q++M E G+ PD TF+T+I S G ++A LE
Sbjct: 421 ISFNTMIDGTLKAGDFQ-FVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALE 479
Query: 403 EMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC 462
M P+ + LLK G T E ++ LL M K + LD + ++ LC
Sbjct: 480 RMVA-SGFTPDALVYDSLLKGLSSKGDTTEIIN-LLHQMAAKGTV-LDRKIVSTILTCLC 536
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 144/342 (42%), Gaps = 27/342 (7%)
Query: 29 SENCSHIVSSSPIESYCSDGARLDHHQVLCVDSPRLPDIDVIISKVHVGSSEDE------ 82
E S++ + + C +G +D ++L + + DV+ + D+
Sbjct: 203 GEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEA 262
Query: 83 --VFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWK--SALGIFRW---AGSCPGYEHSSE 135
+F S+ + C ++P+ + N LI + + A+ I R GSC
Sbjct: 263 LKLFNSMFDNENC--LEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLV---- 316
Query: 136 IYEMMVDILGKVRQMDQMRALLEE-MSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
Y M++ K ++ + L ++ + G + T + ++ F A F E+
Sbjct: 317 TYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEM 376
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINR- 252
T GL N L+ +LCKEG +E A+S+F E+ + P+ +FN I G K
Sbjct: 377 RTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDF 436
Query: 253 --VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
V E Q + EM G P +++ST+I + + L+ M A G P+ + Y
Sbjct: 437 QFVKELQMKMVEM---GLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVY 493
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
+++ L+ GD E I + +M G+ D + + ++ L
Sbjct: 494 DSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCL 535
>gi|356547426|ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Glycine max]
Length = 825
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 192/397 (48%), Gaps = 15/397 (3%)
Query: 122 RWAGSCPGYEHSSEIYEMMVDILGKVRQMD---QMRALLEEMSKGHIVTLNTIAKVMRRF 178
RW C + Y M++D G ++ D RAL E KG + T+ T ++ F
Sbjct: 231 RWGKCCVPH---VVFYNMIID--GYCKKGDLQCATRALNELKMKGVLPTVETYGALINGF 285
Query: 179 SGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK--SCIPPN 236
AG++E + E+ GL N + N ++D K G V A + + C P+
Sbjct: 286 CKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEMGC-GPD 344
Query: 237 AHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLD 296
T+NI I+ CK R++EA +++ K G P SY+ ++ +YC++ ++ K +L
Sbjct: 345 ITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLF 404
Query: 297 EMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRAS 356
+ G ++V+Y + + +G+ + A+ + EKM G PD++ +N L+ L +
Sbjct: 405 RIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKG 464
Query: 357 RVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQT 416
R+ A+ + EM + V PD F T+I F +G ++A + + + + + P +
Sbjct: 465 RI-PAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIR-KGVDPGIVG 522
Query: 417 FHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKE 476
++ ++K K GK + LS L++M + HH + D TY+ VI G + + A +F +
Sbjct: 523 YNAMIKGFCKFGKMTDALS-CLNEMNSVHH-APDEYTYSTVIDGYVKQHDMSSALKMFGQ 580
Query: 477 MIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
M+ H P T +++ +K AEK+ + MK
Sbjct: 581 MMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGMK 617
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/427 (24%), Positives = 196/427 (45%), Gaps = 25/427 (5%)
Query: 89 QDHVCNAIQPSHYLVNKLIHRFKD---DWKSALGIFRWAGSCP------GYEHSSEIYEM 139
QD + + S +V+ + H D D + L F WA + P G HSS
Sbjct: 46 QDPLESRFAESKVVVSDVAHFVIDRVHDAELGLKFFDWASTRPFSCSLDGVAHSS----- 100
Query: 140 MVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTF- 197
++ +L R ++ +LE M H+ T + ++ ++ +G + A++ F +
Sbjct: 101 LLKLLASYRVFPEIELVLENMKAQHLKPTREAFSALILAYAESGSLDRALQLFHTVREMH 160
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVFLEL-----KSCIPPNAHTFNIFIHGWCKINR 252
NLLL+ L K GKV++A ++ ++ + + +T +I + G C + +
Sbjct: 161 NCFPTFVASNLLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIMVKGLCNLGK 220
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
++E + I+ G C P V+ Y+ II YC++ + L+E++ +G P V TY
Sbjct: 221 IEEGRRLIKHRWGKCCVPHVVFYNMIIDGYCKKGDLQCATRALNELKMKGVLPTVETYGA 280
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN 372
+++ K+G+FE ++ +M G + + FN +I + V EA + + M E
Sbjct: 281 LINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAAEMLR-RMAEM 339
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
G PD +T+N MI G E+A +LE+ K PN ++ PL+ + K G +
Sbjct: 340 GCGPDITTYNIMINFSCKGGRIEEADELLEKA-KERGLLPNKFSYTPLMHAYCKKGDYVK 398
Query: 433 CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLI 492
L + + D+ +Y IHG+ A + + A ++ ++M+ + P Q ++
Sbjct: 399 ASGMLFR--IAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNIL 456
Query: 493 LDEVKQK 499
+ + +K
Sbjct: 457 MSGLCKK 463
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 126/278 (45%), Gaps = 22/278 (7%)
Query: 209 LLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG 267
L+D + G+++ A +F + ++ + P +N I G+CK ++ +A + EM
Sbjct: 491 LIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVH 550
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
P +YST+I Y +Q++ S ++ +M PNV+TYT++++ K D A
Sbjct: 551 HAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAE 610
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITM 387
++ MK P+ + L+ +A + + A ++++ M NG P+ +TF+ +I
Sbjct: 611 KVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFEL-MLMNGCLPNDATFHYLING 669
Query: 388 FSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLK---------------SCFKTGKTDE 432
++ ++EE + E+ + + F ++ C T +
Sbjct: 670 LTNTATSPV---LIEEKDSKENERSLILDFFTMMLLDGWDQVIAAYNSVIVCLCKHGTVD 726
Query: 433 CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKC-EW 469
LL M+ K L +D +T ++HGLC K EW
Sbjct: 727 TAQLLLTKMLTKGFL-IDSVCFTALLHGLCHKGKSKEW 763
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 82/392 (20%), Positives = 154/392 (39%), Gaps = 53/392 (13%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +M++ K ++++ LLE+ +G + + +M + G + A +
Sbjct: 348 YNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIA 407
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
G + + + + + G++++A V ++ + + P+A +NI + G CK R+
Sbjct: 408 EIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIP 467
Query: 255 EAQWTIQEMKGH-----------------------------------GCHPCVISYSTII 279
+ + EM G P ++ Y+ +I
Sbjct: 468 AMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMI 527
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
+ +C+ + L+EM + P+ TY+TV+ K D A+++ +M K
Sbjct: 528 KGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFK 587
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
P+ + LI + + + A V+ M + P+ T+ T++ F G E+A
Sbjct: 588 PNVITYTSLINGFCKKADMIRAEKVFS-GMKSFDLVPNVVTYTTLVGGFFKAGKPERATS 646
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLD--------- 450
+ E M + C PN TFH L+ T T L + D N+ L LD
Sbjct: 647 IFELM-LMNGCLPNDATFHYLINGLTNTA-TSPVLIEEKDSKENERSLILDFFTMMLLDG 704
Query: 451 ----ITTYTLVIHGLCRANKCEWAYLLFKEMI 478
I Y VI LC+ + A LL +M+
Sbjct: 705 WDQVIAAYNSVIVCLCKHGTVDTAQLLLTKML 736
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 112/458 (24%), Positives = 203/458 (44%), Gaps = 12/458 (2%)
Query: 64 LPDI---DVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWK--SAL 118
LPD+ +V+I+ + +E F +++ + PS N ++H K +A+
Sbjct: 91 LPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAM 150
Query: 119 GIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRR 177
F + G Y +VD L K +++ AL+E++ + G T+ T ++
Sbjct: 151 DHFETT-TTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNG 209
Query: 178 FSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPN 236
G+ E+A+ ++ G + T L+D L KE + A +F E+ + +
Sbjct: 210 LCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLD 269
Query: 237 AHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLD 296
+ I G + ++ +A + M GC P V++ ST+I C+ +
Sbjct: 270 TVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFK 329
Query: 297 EMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRAS 356
M+A+G PN V Y+ ++ L K+ + A+ + +MK PD+ +N LI L ++
Sbjct: 330 SMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSG 389
Query: 357 RVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQT 416
V EA + EM E G PD T+N +++ F G+ + A V ++M+ HC PNV T
Sbjct: 390 DV-EAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSS-SHCSPNVVT 447
Query: 417 FHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKE 476
+ L+ K + + + L + + D Y+ ++ GLC++ K E +LF E
Sbjct: 448 YGTLISGLCKRRQLTK--ASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDE 505
Query: 477 MIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
M + RLI K + +A A+ K+
Sbjct: 506 MERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKE 543
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 147/317 (46%), Gaps = 7/317 (2%)
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS--CIPPNAHTFNIFIHGWCK 249
+EL T L + ET N+L+ C + E A +V E++ + P+ T N+ +HG CK
Sbjct: 84 NELATTFLP-DVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCK 142
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
+V A + +GC + +Y+ I+ + L++++ A GC P + T
Sbjct: 143 SGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIAT 202
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM 369
Y +++ L K G EEAI + K+ G PD + LI LG+ R EA +++ EM
Sbjct: 203 YNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFK-EM 261
Query: 370 PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
G+ DT + +I G +A V + M + C P+V T ++ K G+
Sbjct: 262 ALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTS-QGCVPDVVTLSTMIDGLCKAGR 320
Query: 430 TDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTC 489
+ ++ M L+ + Y+ +IHGLC+A K + A + +M TP T
Sbjct: 321 IGAAV-RIFKSM-EARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITY 378
Query: 490 RLILDEVKQKHMYDAAE 506
+++D + + +AA
Sbjct: 379 NILIDGLCKSGDVEAAR 395
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 144/299 (48%), Gaps = 6/299 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ L + ++ Q ++ + M S+G + + T++ ++ AG+ AVR F +
Sbjct: 273 YTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSME 332
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCI-PPNAHTFNIFIHGWCKINRVD 254
GL N + L+ LCK K++ A + ++K P+ T+NI I G CK V+
Sbjct: 333 ARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVE 392
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
A+ EM GC P V +Y+ ++ +C+ N + D+M + C PNVVTY T++
Sbjct: 393 AARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLI 452
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
S L K +A + MK G PDS ++ L+ L ++ +++ ++ EM +GV
Sbjct: 453 SGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFD-EMERSGV 511
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
A ++ T +I ++A + + K P+ ++ ++ + K+ K + C
Sbjct: 512 A-NSQTRTRLIFHLCKANRVDEAVSLFNAIRK--EGMPHPYAYNSIISTLIKSAKVNPC 567
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 152/320 (47%), Gaps = 6/320 (1%)
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVFL-ELKSCIPPNAHTFNIFIHGWCKINRVDE 255
FG + + T N LLD + + A ++ EL + P+ T+N+ I G+C +E
Sbjct: 53 FGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEE 112
Query: 256 AQWTIQEMK-GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
A I+EM+ +G P + +++ ++ C+ + + GC ++ TYT ++
Sbjct: 113 AFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIV 172
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
+LAK+ ++A+ + EK+ G P +N L+ L + R++EA+ + + ++ +NG
Sbjct: 173 DWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLR-KIVDNGC 231
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
PD T+ ++I +A+ + +EM L + + L++ + GK +
Sbjct: 232 TPDVVTYTSLIDGLGKEKRSFEAYKLFKEM-ALRGLVLDTVCYTALIRGLLQAGKIPQA- 289
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
S + M ++ + D+ T + +I GLC+A + A +FK M + P ++
Sbjct: 290 SSVYKTMTSQGCVP-DVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIH 348
Query: 495 EVKQKHMYDAAEKIEAVMKK 514
+ + D A ++ A MKK
Sbjct: 349 GLCKARKMDCALEMLAQMKK 368
>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Vitis vinifera]
Length = 728
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 171/376 (45%), Gaps = 17/376 (4%)
Query: 117 ALGIFRWAGSCPGYEHSSEI--YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAK 173
A+G+ R G S +I Y +++ L K +++ + LL EM + G T
Sbjct: 163 AMGLIREMGR---KSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTT 219
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSC 232
+M G+ ++A+ + + G + + L+ C G ++ + +F E L
Sbjct: 220 LMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKG 279
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
I N T++ +HG C++ + EA + M HG HP V++Y+ +I C+ +
Sbjct: 280 ISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAM 339
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
+LL+ M +G P+ VTY ++S L K G +A +I M G K D +N L+ L
Sbjct: 340 DLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGL 399
Query: 353 GRASRVQEAVYVYQVEMP-ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCK 411
+V EA+ ++ EN + P+ TFN +I G KA + +M K C
Sbjct: 400 CDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCG 459
Query: 412 PNVQTFHPLLKSCFKTGKTDECL---SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
N+ T++ LL C K GK E + Q+LD + TY+++I G C+
Sbjct: 460 -NLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSF-----TYSILIDGFCKMRMLN 513
Query: 469 WAYLLFKEMIGHDITP 484
A LF EM H + P
Sbjct: 514 IAKGLFCEMRTHGLNP 529
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 160/322 (49%), Gaps = 7/322 (2%)
Query: 160 MSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV 219
+ +G V + + V++ G +A+ E+G + + + N L++ LCK K+
Sbjct: 136 LKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKL 195
Query: 220 ELARSVFLELKS--CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
+ A + LE+++ C PN+ T + G CK R+DEA ++ MK G V+ Y T
Sbjct: 196 KEAVGLLLEMEAAGCF-PNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGT 254
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+I +C N + EL DEM +G NVVTY+ ++ L + G ++EA + M G
Sbjct: 255 LISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHG 314
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKA 397
PD + LI L + R A+ + + M E G P T+N +++ G A
Sbjct: 315 IHPDVVTYTGLIDGLCKDGRATHAMDLLNL-MVEKGEEPSNVTYNVLLSGLCKEGLVIDA 373
Query: 398 FHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMV-NKHHLSLDITTYTL 456
F +L M + + K +V T++ L+K GK DE L +L + M N++ L ++ T+ +
Sbjct: 374 FKILRMMIE-KGKKADVVTYNTLMKGLCDKGKVDEAL-KLFNSMFDNENCLEPNVFTFNM 431
Query: 457 VIHGLCRANKCEWAYLLFKEMI 478
+I GLC+ + A + ++M+
Sbjct: 432 LIGGLCKEGRLTKAVKIHRKMV 453
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 149/318 (46%), Gaps = 46/318 (14%)
Query: 129 GYEHSSEIYEMMVDILGK----VRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQW 184
G E S+ Y +++ L K + +R ++E+ K +VT NT+ M+ G+
Sbjct: 349 GEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTL---MKGLCDKGKV 405
Query: 185 EDAVRTFDEL--GTFGLEKNTETMNLLLDTLCKEGKVELARSVF---------------- 226
++A++ F+ + LE N T N+L+ LCKEG++ A +
Sbjct: 406 DEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYN 465
Query: 227 LELKSCIP--------------------PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
+ L C+ PN+ T++I I G+CK+ ++ A+ EM+ H
Sbjct: 466 MLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTH 525
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
G +P + Y+T++ S C++ + + L EM C P+++++ T++ K+GDF+
Sbjct: 526 GLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFV 585
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
+ KM +G +PD+ F+ LI L + + EA + M +G PD +++++
Sbjct: 586 KELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALE-RMVASGFTPDALVYDSLLK 644
Query: 387 MFSHHGHHEKAFHVLEEM 404
S G + ++L +M
Sbjct: 645 GLSSKGDTTEIINLLHQM 662
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 160/405 (39%), Gaps = 77/405 (19%)
Query: 183 QWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF---------------- 226
Q+ +AV F F L + T N L+D L + LA SV+
Sbjct: 54 QFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLS 113
Query: 227 --------------------LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
L LK N NI + G C+ V EA I+EM
Sbjct: 114 ALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRK 173
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
P ++SY+T+I C+ + LL EM+A GC PN VT TT+M L K G +EA
Sbjct: 174 SVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEA 233
Query: 327 IRITEKMKIVGSKPD--------SRF---------------------------FNCLIYT 351
+ + E MK G D S F ++CL++
Sbjct: 234 MELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHG 293
Query: 352 LGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCK 411
L R + +EA V M E+G+ PD T+ +I G A +L M + +
Sbjct: 294 LCRLGQWKEANTVLNA-MAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGE-E 351
Query: 412 PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAY 471
P+ T++ LL K G + ++L M+ K + D+ TY ++ GLC K + A
Sbjct: 352 PSNVTYNVLLSGLCKEGLVIDAF-KILRMMIEKGKKA-DVVTYNTLMKGLCDKGKVDEAL 409
Query: 472 LLFKEMIGHD--ITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
LF M ++ + P T +++ + ++ A KI M K
Sbjct: 410 KLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVK 454
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 116/482 (24%), Positives = 194/482 (40%), Gaps = 60/482 (12%)
Query: 33 SHIVSSSPIESYCSDGARLDHHQVLCVDSPRLPDIDVIISKVHVGS--------SEDEVF 84
+ + ++ ++ C DG + ++L + D DV++ + E+F
Sbjct: 213 NSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELF 272
Query: 85 QSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDIL 144
+ + + LV+ L WK A + A + G Y ++D L
Sbjct: 273 DEMLGKGISANVVTYSCLVHGLCRL--GQWKEANTVLN-AMAEHGIHPDVVTYTGLIDGL 329
Query: 145 GK----VRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLE 200
K MD + ++E+ + VT N + + G DA + + G +
Sbjct: 330 CKDGRATHAMDLLNLMVEKGEEPSNVTYNVL---LSGLCKEGLVIDAFKILRMMIEKGKK 386
Query: 201 KNTETMNLLLDTLCKEGKVELARSVF---LELKSCIPPNAHTFNIFIHGWCKINRVDEAQ 257
+ T N L+ LC +GKV+ A +F + ++C+ PN TFN+ I G CK R+ +A
Sbjct: 387 ADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAV 446
Query: 258 WTIQEM--KGH------------GCH---------------------PCVISYSTIIQSY 282
++M KG GC P +YS +I +
Sbjct: 447 KIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGF 506
Query: 283 CRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDS 342
C+ + L EM+ G P + Y T+M+ L K G E+A + ++M +PD
Sbjct: 507 CKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDI 566
Query: 343 RFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLE 402
FN +I +A Q V Q++M E G+ PD TF+T+I S G ++A LE
Sbjct: 567 ISFNTMIDGTLKAGDFQ-FVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALE 625
Query: 403 EMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC 462
M P+ + LLK G T E ++ LL M K + LD + ++ LC
Sbjct: 626 RMVA-SGFTPDALVYDSLLKGLSSKGDTTEIIN-LLHQMAAKGTV-LDRKIVSTILTCLC 682
Query: 463 RA 464
+
Sbjct: 683 HS 684
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 144/342 (42%), Gaps = 27/342 (7%)
Query: 29 SENCSHIVSSSPIESYCSDGARLDHHQVLCVDSPRLPDIDVIISKVHVGSSEDE------ 82
E S++ + + C +G +D ++L + + DV+ + D+
Sbjct: 349 GEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEA 408
Query: 83 --VFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWK--SALGIFRW---AGSCPGYEHSSE 135
+F S+ + C ++P+ + N LI + + A+ I R GSC
Sbjct: 409 LKLFNSMFDNENC--LEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLV---- 462
Query: 136 IYEMMVDILGKVRQMDQMRALLEE-MSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
Y M++ K ++ + L ++ + G + T + ++ F A F E+
Sbjct: 463 TYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEM 522
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINR- 252
T GL N L+ +LCKEG +E A+S+F E+ + P+ +FN I G K
Sbjct: 523 RTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDF 582
Query: 253 --VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
V E Q + EM G P +++ST+I + + L+ M A G P+ + Y
Sbjct: 583 QFVKELQMKMVEM---GLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVY 639
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
+++ L+ GD E I + +M G+ D + + ++ L
Sbjct: 640 DSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCL 681
>gi|10177952|dbj|BAB11311.1| unnamed protein product [Arabidopsis thaliana]
Length = 680
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 104/410 (25%), Positives = 191/410 (46%), Gaps = 6/410 (1%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS 161
+V +++R ++ + F WA PG Y +++ LG+ + M +L+ M
Sbjct: 119 IVADVLNRGNLSGEAMVTFFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMV 178
Query: 162 -KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVE 220
+G L + M F A+ F+E +FG++ +TE+ N LL LC+ V
Sbjct: 179 CEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVS 238
Query: 221 LARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQ 280
A+SVF K IP ++ ++NI I GW K+ V+E + ++EM G P +SYS +I+
Sbjct: 239 AAKSVFNAKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIE 298
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
R + E+ D ++ +G P+ Y ++ + DF+E++R +M +P
Sbjct: 299 GLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEP 358
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
+ ++ L+ L + +V +A+ +++ EM GV P T + + +G A +
Sbjct: 359 NLETYSKLVSGLIKGRKVSDALEIFE-EMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVI 417
Query: 401 LEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHG 460
++ K C+ + + LLK + GK L+ + D+M + S D+ Y ++ G
Sbjct: 418 YQKSRK-AGCRISESAYKLLLKRLSRFGKCGMLLN-VWDEMQESGYPS-DVEVYEYIVDG 474
Query: 461 LCRANKCEWAYLLFKEMIGHDITP-RYQTCRLILDEVKQKHMYDAAEKIE 509
LC E A L+ +E + P R+ RL + Q+ E++E
Sbjct: 475 LCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSIIRKWQQKFRKGKEEME 524
>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
Length = 770
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 197/434 (45%), Gaps = 15/434 (3%)
Query: 62 PRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLI--HRFKDDWKSALG 119
P + ++I+ + G EV ++ Q+ I P+ + N+LI H + AL
Sbjct: 284 PSIVTFGILINGLARGQRFGEV-DAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALR 342
Query: 120 IFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKG----HIVTLNTIAKVM 175
+F S G + + Y ++ L K +M+ +L+EM H N++ V
Sbjct: 343 LFDEMVS-KGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSV--VA 399
Query: 176 RRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSV-FLELKSCIP 234
G G+ + +R E+ L+ N M + LCK GK E A + FL L +
Sbjct: 400 WHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLG 459
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYEL 294
N T N IHG C+ N + EA ++ M G I+Y+ +IQ C+ + +L
Sbjct: 460 VNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQL 519
Query: 295 LDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGR 354
D+M +G P++ T+ T + G E+ + + ++MK G KPD + +I +
Sbjct: 520 RDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCK 579
Query: 355 ASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNV 414
A V +A Y +E+ +NG+ P+ +N +I + +G A VL+ M K +P
Sbjct: 580 AKDVHKA-NKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTM-KHNGIQPTP 637
Query: 415 QTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLF 474
T++ L+ G +E ++ + K ++ L + YT++I G C+ K + A + F
Sbjct: 638 ITYNSLMYWMCHAGLVEEA-KEIFAQCILK-NIELGVIGYTIIIQGFCKIGKIDEAVMYF 695
Query: 475 KEMIGHDITPRYQT 488
KEM DI P T
Sbjct: 696 KEMHYRDIRPNKMT 709
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 167/366 (45%), Gaps = 14/366 (3%)
Query: 126 SCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVT--LNTIAKVMRRFSGAGQ 183
S G S + ++V+ LG Q+D R + EM G+ V + T +++ AG+
Sbjct: 172 STRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMIKALCRAGE 231
Query: 184 WEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNI 242
+ A EL G++ T N+L+D LC+ G+VE A + + + + P+ TF I
Sbjct: 232 IDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIVTFGI 291
Query: 243 FIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
I+G + R E +QEM+G G P + Y+ +I +CR+ + S+ L DEM ++G
Sbjct: 292 LINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSKG 351
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
VVTY + L K G+ E A +I ++M + G FN ++ R + + V
Sbjct: 352 IKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLDVV 411
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKA----FHVLEEMNKLEHCKPNVQTFH 418
EM + P+ + I G HE+A F VL + N+ T +
Sbjct: 412 LRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLG-----KGLGVNIATSN 466
Query: 419 PLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
L+ + E +++L MV+ + D TY ++I C+A+K E A L +MI
Sbjct: 467 ALIHGLCQGNNMKEA-TKVLKAMVDS-GVEFDRITYNIMIQFCCKASKMEEAIQLRDDMI 524
Query: 479 GHDITP 484
P
Sbjct: 525 KRGFKP 530
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 144/334 (43%), Gaps = 40/334 (11%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK--SCIPPNAHT 239
G A F EL T G + +T N+L++ L G+++LAR VF E++ + + P+ +T
Sbjct: 159 GSLSCAADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYT 218
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+ + I C+ +D A + E++ G P V++Y+ ++ + CR + ++L M
Sbjct: 219 YTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMV 278
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
P++VT+ +++ LA+ F E + ++M+ G P+ +N LI R
Sbjct: 279 EGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCS 338
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM---NKLEHC------ 410
EA+ ++ EM G+ T+N + G E A +L+EM HC
Sbjct: 339 EALRLFD-EMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSV 397
Query: 411 --------------------------KPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK 444
KPN ++ K GK +E +V
Sbjct: 398 VAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWF--LVLG 455
Query: 445 HHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
L ++I T +IHGLC+ N + A + K M+
Sbjct: 456 KGLGVNIATSNALIHGLCQGNNMKEATKVLKAMV 489
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 146/310 (47%), Gaps = 5/310 (1%)
Query: 160 MSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV 219
+ KG V + T ++ ++A + + G+E + T N+++ CK K+
Sbjct: 454 LGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKM 513
Query: 220 ELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTI 278
E A + ++ K P+ TFN F+ +C + +V++ + +MK G P +++Y TI
Sbjct: 514 EEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTI 573
Query: 279 IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
I YC+ + K + L E+ G PN V Y ++ ++G +AI + + MK G
Sbjct: 574 IDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGI 633
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
+P +N L+Y + A V+EA ++ + +N + + +I F G ++A
Sbjct: 634 QPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKN-IELGVIGYTIIIQGFCKIGKIDEAV 692
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
+EM+ +PN T+ L+ + K G +E +L D+MV+ + D +Y +I
Sbjct: 693 MYFKEMH-YRDIRPNKMTYTTLMYAYCKCGNKEEAF-KLFDEMVSSGIVP-DTVSYNTLI 749
Query: 459 HGLCRANKCE 468
G C + +
Sbjct: 750 SGCCEVDSLD 759
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 8/177 (4%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQW 184
G ++ IY ++ G+ + +L+ M I +T N++ M AG
Sbjct: 597 GLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSL---MYWMCHAGLV 653
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIF 243
E+A F + +E +++ CK GK++ A F E+ I PN T+
Sbjct: 654 EEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTL 713
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
++ +CK +EA EM G P +SY+T+I C + K+ E EM +
Sbjct: 714 MYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCCEVDSLDKIVESPAEMSS 770
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 412 PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAY 471
P+++T + L+++ G+ D ++ +M + + ++ D+ TYT++I LCRA + + A+
Sbjct: 178 PSIKTCNILVEALGCGGQLD-LARKVFGEMRDGNAVAPDVYTYTVMIKALCRAGEIDAAF 236
Query: 472 LLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
++ E+ I P T +++D + + + A +++ M
Sbjct: 237 VMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRM 277
>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
Length = 745
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 160/314 (50%), Gaps = 5/314 (1%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTF 240
G E+A+R +L + G + N ++LL +LCK G+V+ A + E+++ + P+ T+
Sbjct: 305 GNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTY 364
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
+I IHG CK +V +A +EM + P ++S I++ C + S D +
Sbjct: 365 SILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIM 424
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
P+V Y ++ K GD EEA+R+ ++++ P FN LIY + +V E
Sbjct: 425 SNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVE 484
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
A + + + +G+ P T+ T++ + G+ K +L EMN L+ +P V T+ +
Sbjct: 485 ARRLLE-SIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMN-LKDIEPTVVTYTVV 542
Query: 421 LKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH 480
+K K K +E + QLL+DM K L+ D TY +I C+A A+ L +M+ H
Sbjct: 543 IKGLCKQRKLEESV-QLLEDMRAK-GLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIH 600
Query: 481 DITPRYQTCRLILD 494
++ P T +++D
Sbjct: 601 NLEPTPATYNVLID 614
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 180/373 (48%), Gaps = 12/373 (3%)
Query: 145 GKVRQMDQMRALLEEMSKGHIVTLNTIA--KVMRRFSGAGQWEDAVRTFDELGTFGLEKN 202
GKV+Q Q L +EM I N+ A +++ G DA FD L L +
Sbjct: 375 GKVQQAIQ---LYKEMCFNRIFP-NSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPD 430
Query: 203 TETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQ 261
N+++D K G VE A ++ L+ I P+ TFN I+G+CK +V EA+ ++
Sbjct: 431 VTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLE 490
Query: 262 EMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSG 321
+K HG P ++Y+T++ +YC + N +K++ELL EM + P VVTYT V+ L K
Sbjct: 491 SIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQR 550
Query: 322 DFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTF 381
EE++++ E M+ G PD +N +I +A +++A + +M + + P +T+
Sbjct: 551 KLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLD-DMLIHNLEPTPATY 609
Query: 382 NTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDM 441
N +I +G E A VL + + + ++K+ G + ++ M
Sbjct: 610 NVLIDGLCRYGDVEDADRVLVSLQD-RNINLTKVAYTTMIKAHCVKGDAQRAV-KVFHQM 667
Query: 442 VNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKH 500
V K + I Y+ VI+ LC+ A F M+ ++P + ++L+ + H
Sbjct: 668 VEK-GFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGH 726
Query: 501 MYDAAEKIEAVMK 513
++ E + ++K
Sbjct: 727 VHSVFELLAVMIK 739
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 168/360 (46%), Gaps = 27/360 (7%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAV 188
G++HS ++ +L + R+ +R +L++M + + + DA+
Sbjct: 58 GFQHSRVSRFLVSHVLARKRRFKDLRLVLDQMLQEEV--------------ASRMVHDAL 103
Query: 189 RTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGW 247
++ L + +T N LL L ++ V+ ++K S P +A T +I + G
Sbjct: 104 FVLVKMKEQNLRPSIQTYNSLLYNL---RHTDIMWDVYNDIKDSGTPQSARTSSIIVDGL 160
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
C +R +A +++ G P V+S++TI+ YC+ M G P+
Sbjct: 161 CGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDT 220
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL---IYTLGRASRVQEAVYV 364
+Y ++ L +G EEA+ +T M+ G +PD + + + LG S +E +
Sbjct: 221 YSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREII-- 278
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
Q + + G+ PD T+ +I G+ E+A + ++ + NV + LL S
Sbjct: 279 -QKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLS-SGFQLNVILYSVLLSSL 336
Query: 425 FKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
K G+ DE L QLL +M ++L D+ TY+++IHGLC+ K + A L+KEM + I P
Sbjct: 337 CKRGQVDEAL-QLLYEM-EANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFP 394
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 171/371 (46%), Gaps = 42/371 (11%)
Query: 144 LGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNT 203
+G + + ++R L +S G + + + ++ GQ ++A++ E+ L+ +
Sbjct: 304 MGNIEEALRLRRDL--LSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDL 361
Query: 204 ETMNLLLDTLCKEGKVELARSVFLEL---------------------------------- 229
T ++L+ LCK+GKV+ A ++ E+
Sbjct: 362 VTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDS 421
Query: 230 --KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYN 287
S + P+ +NI I G+ K+ V+EA + ++ P +++++++I +C+
Sbjct: 422 LIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRK 481
Query: 288 FSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNC 347
+ LL+ ++ G P+ VTYTT+M+ + G+ + + +M + +P +
Sbjct: 482 VVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTV 541
Query: 348 LIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKL 407
+I L + +++E+V + + +M G+APD T+NT+I F KAF +L++M +
Sbjct: 542 VIKGLCKQRKLEESVQLLE-DMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDM-LI 599
Query: 408 EHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKC 467
+ +P T++ L+ + G ++ L+ + +++L YT +I C
Sbjct: 600 HNLEPTPATYNVLIDGLCRYGDVEDADRVLVS--LQDRNINLTKVAYTTMIKAHCVKGDA 657
Query: 468 EWAYLLFKEMI 478
+ A +F +M+
Sbjct: 658 QRAVKVFHQMV 668
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 173/370 (46%), Gaps = 42/370 (11%)
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS--CIPPNAH 238
AG E+A+ +++ GL+ + T ++ G + AR + ++ + + P+
Sbjct: 233 AGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLV 292
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
T+ + I G C++ ++EA +++ G VI YS ++ S C++ + +LL EM
Sbjct: 293 TYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEM 352
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM------------------------- 333
+A P++VTY+ ++ L K G ++AI++ ++M
Sbjct: 353 EANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGML 412
Query: 334 --------KIVGS--KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNT 383
++ S +PD +N +I + V+EAV +Y+ + + + P TFN+
Sbjct: 413 SDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYK-RLRDKAITPSIVTFNS 471
Query: 384 MITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVN 443
+I F + +A +LE + KL +P+ T+ L+ + + G ++ L +LL +M N
Sbjct: 472 LIYGFCKNRKVVEARRLLESI-KLHGLEPSAVTYTTLMNAYCEEGNINK-LHELLLEM-N 528
Query: 444 KHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD-EVKQKHMY 502
+ + TYT+VI GLC+ K E + L ++M + P T I+ K K M
Sbjct: 529 LKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMR 588
Query: 503 DAAEKIEAVM 512
A E ++ ++
Sbjct: 589 KAFELLDDML 598
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 171/359 (47%), Gaps = 7/359 (1%)
Query: 129 GYEHSSEIYEMMVDIL-GKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G S+ ++VD L G+ R D + L + K ++ + +M R+ G + A
Sbjct: 145 GTPQSARTSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVA 204
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHG 246
F + +G+ +T + N+L+ L G +E A + ++ K + P+ T+ I G
Sbjct: 205 KSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKG 264
Query: 247 WCKINRVDEAQWTIQEM-KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
+ + + A+ IQ+M G P +++Y+ +I +C+ N + L ++ + G
Sbjct: 265 FHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQL 324
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
NV+ Y+ ++S L K G +EA+++ +M+ +PD ++ LI+ L + +VQ+A+ +Y
Sbjct: 325 NVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLY 384
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
+ EM N + P++ + ++ G A + + + + +P+V ++ ++
Sbjct: 385 K-EMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSL-IMSNLRPDVTLYNIMIDGYV 442
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
K G +E + L + ++ I T+ +I+G C+ K A L + + H + P
Sbjct: 443 KLGDVEEAVR--LYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEP 499
>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
Length = 480
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 180/405 (44%), Gaps = 48/405 (11%)
Query: 152 QMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLL 210
Q A++EEM G + + ++R F +G ++ D + GL N N L+
Sbjct: 12 QAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNNLI 71
Query: 211 DTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHP 270
LCK G + A S + PN ++NI I G+CK +++A ++EM+ G P
Sbjct: 72 SCLCKAGMLAEAESYLKRMPQHCAPNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPP 131
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRIT 330
+YS+I+QS+C+ N SK ++ EM A+GC P++V + ++S L ++ EA +
Sbjct: 132 TPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELF 191
Query: 331 EKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSH 390
M G KPD +N +I L + ++ EAV++ + M + V+P T+ T+I
Sbjct: 192 RSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLE-RMKQEDVSPTFVTYTTLIDHLCK 250
Query: 391 HGHHEKAFHVLEEM------------------NKLEHCK--------------------P 412
++A+ V E+M N L CK P
Sbjct: 251 FARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGL--CKARRPGEAKEMFQEMRGRGISP 308
Query: 413 NVQTFHPLLKSCFKTGKTDEC--LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWA 470
V T++ LL+ T K + L+ + D V ++ TY ++I LC+ ++ E A
Sbjct: 309 TVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNM----FTYEILISSLCKTDQVEEA 364
Query: 471 YLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
+ L M P + ++L + + D A ++ M ++
Sbjct: 365 FKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRI 409
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 168/381 (44%), Gaps = 43/381 (11%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +++D K R +++ A L EM + GH T + + +++ F G A+ F E+
Sbjct: 101 YNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMP 160
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVD 254
G E + N+LL L + K+ AR +F + S P+ T+N I G CK ++D
Sbjct: 161 AKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLD 220
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP---------- 304
EA + ++ MK P ++Y+T+I C+ + YE+ ++M CP
Sbjct: 221 EAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLI 280
Query: 305 ---------------------------PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
P VVTY T++ L + ++A+ +T M
Sbjct: 281 LINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQV 340
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKA 397
P+ + LI +L + +V+EA + M + G P + +++ + G + A
Sbjct: 341 PAPNMFTYEILISSLCKTDQVEEAFKLLSA-MRDKGFVPSLKIWEVLLSRLARAGRLDDA 399
Query: 398 FHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLV 457
F + +EM+++ +C+ V + + LL + G DE L M + + D TY +
Sbjct: 400 FELYKEMSRI-NCQQLVGSSNILLDGILRRGSVDEA-KDFLKQMTDTGIVP-DKFTYDKL 456
Query: 458 IHGLCRANKCEWAYLLFKEMI 478
+ GLC K + A L +E++
Sbjct: 457 VVGLCWQGKADQARKLVEELV 477
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 176/379 (46%), Gaps = 17/379 (4%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEMSK---GHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
+Y ++ L K + + + L+ M + ++V+ N I + + A E A+
Sbjct: 66 LYNNLISCLCKAGMLAEAESYLKRMPQHCAPNVVSYNII---IDGYCKARNIEKALAFLR 122
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKI 250
E+ G + ++ + CK G V A VF E+ K C P+ FN+ + G +
Sbjct: 123 EMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGC-EPDIVNFNVLLSGLWRA 181
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
++ EA+ + M GC P V++Y+T+I C+ + LL+ M+ + P VTY
Sbjct: 182 RKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTY 241
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLG--RASRVQEAVYVYQVE 368
TT++ +L K ++A + EKM ++ LI G +A R EA ++Q E
Sbjct: 242 TTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQ-E 300
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHC-KPNVQTFHPLLKSCFKT 427
M G++P T+NT++ + A + M L+ PN+ T+ L+ S KT
Sbjct: 301 MRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFM--LDQVPAPNMFTYEILISSLCKT 358
Query: 428 GKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
+ +E +LL M +K + + + +++ L RA + + A+ L+KEM +
Sbjct: 359 DQVEEAF-KLLSAMRDKGFVP-SLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVG 416
Query: 488 TCRLILDEVKQKHMYDAAE 506
+ ++LD + ++ D A+
Sbjct: 417 SSNILLDGILRRGSVDEAK 435
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 128/269 (47%), Gaps = 9/269 (3%)
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
I + + V +A+ ++EMK G P V S+ +I+ + + +F + LD M G
Sbjct: 1 IRKLVEADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGL 60
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
PN + Y ++S L K+G EA ++M P+ +N +I +A +++A+
Sbjct: 61 FPNAILYNNLISCLCKAGMLAEAESYLKRMP-QHCAPNVVSYNIIIDGYCKARNIEKAL- 118
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
+ EM E G P +++++ F G+ KA V EM + C+P++ F+ LL
Sbjct: 119 AFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPA-KGCEPDIVNFNVLLSG 177
Query: 424 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
++ K E +L M N D+ TY +I GLC+ K + A L + M D++
Sbjct: 178 LWRARKIHEA-RELFRSM-NSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVS 235
Query: 484 PRYQTCRLILDEV----KQKHMYDAAEKI 508
P + T ++D + + + Y+ EK+
Sbjct: 236 PTFVTYTTLIDHLCKFARLQQAYEVFEKM 264
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 69/133 (51%), Gaps = 2/133 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
YE+++ L K Q+++ LL M KG + +L ++ R + AG+ +DA + E+
Sbjct: 348 YEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMS 407
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
++ + N+LLD + + G V+ A+ ++ + I P+ T++ + G C + D
Sbjct: 408 RINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKAD 467
Query: 255 EAQWTIQEMKGHG 267
+A+ ++E+ G
Sbjct: 468 QARKLVEELVRDG 480
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 167/317 (52%), Gaps = 5/317 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
G + Y ++++ L K Q + E+M + G L T VM + G+ +DA
Sbjct: 228 GLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDA 287
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHG 246
+ FDE+ G+ N T N L+ LC+E K+ A V ++KS I PN T+N I G
Sbjct: 288 FQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDG 347
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
+C + ++ +A +++K G P +++Y+ ++ +CR+ + S +++ EM+ +G P+
Sbjct: 348 FCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPS 407
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
VTYT ++ A+S + E+AI++ M+ +G PD ++ LI+ ++ EA +++
Sbjct: 408 KVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFK 467
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
M E P+ +NTMI + G +A +L+EM + E PNV ++ +++ K
Sbjct: 468 -SMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKE-LAPNVASYRYMIEVLCK 525
Query: 427 TGKTDECLSQLLDDMVN 443
K+ E +L++ M++
Sbjct: 526 ERKSKEA-ERLVEKMID 541
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 176/382 (46%), Gaps = 41/382 (10%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
G+ + IY ++D K ++++ + L EM K G + T ++ G +
Sbjct: 193 GFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQG 252
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHG 246
++++ G+ N T N +++ LCK+G+ + A VF E++ + N T+N I G
Sbjct: 253 FEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGG 312
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C+ +++EA + +MK G +P +I+Y+T+I +C K L +++++G P+
Sbjct: 313 LCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPS 372
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
+VTY ++S + GD A ++ ++M+ G KP + LI T R+ +++A+ + +
Sbjct: 373 LVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQL-R 431
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
+ M E G+ PD T++ +I F G +A + + M + ++C+PN
Sbjct: 432 LSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVE-KNCEPNE------------ 478
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
Y +I G C+ A L KEM ++ P
Sbjct: 479 -------------------------VIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNV 513
Query: 487 QTCRLILDEVKQKHMYDAAEKI 508
+ R +++ + ++ AE++
Sbjct: 514 ASYRYMIEVLCKERKSKEAERL 535
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 183/390 (46%), Gaps = 10/390 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAV 188
G+ S + ++ + +Q + E ++ + + +++ AG+ E +
Sbjct: 124 GFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSF 183
Query: 189 RTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGW 247
EL FG N L+D CK+G++E A+ +F E+ K + N T+ + I+G
Sbjct: 184 DLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGL 243
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
K + ++M+ G P + +Y+ ++ C+ +++ DEM+ +G N+
Sbjct: 244 FKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNI 303
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
VTY T++ L + EA ++ ++MK G P+ +N LI ++ +A+ + +
Sbjct: 304 VTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCR- 362
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKT 427
++ G++P T+N +++ F G A +++EM + KP+ T+ L+ + ++
Sbjct: 363 DLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEE-RGIKPSKVTYTILIDTFARS 421
Query: 428 GKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR-- 485
++ + L + + L D+ TY+++IHG C + A LFK M+ + P
Sbjct: 422 DNMEKAIQLRLS--MEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEV 479
Query: 486 -YQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
Y T +IL K+ Y A + ++ + +K
Sbjct: 480 IYNT--MILGYCKEGSSYRALKLLKEMEEK 507
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 155/329 (47%), Gaps = 4/329 (1%)
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHG 246
++ F+E+ G + N LL + S F E KS + + ++F I I G
Sbjct: 113 SISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKG 172
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C+ ++++ + E+ G P V+ Y+T+I C++ K +L EM G N
Sbjct: 173 CCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVAN 232
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
TYT +++ L K+G ++ + EKM+ G P+ +NC++ L + R ++A V+
Sbjct: 233 ERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFD 292
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
EM E GV+ + T+NT+I +A V+++M K + PN+ T++ L+
Sbjct: 293 -EMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM-KSDGINPNLITYNTLIDGFCG 350
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
GK + LS D + LS + TY +++ G CR A + KEM I P
Sbjct: 351 VGKLGKALSLCRD--LKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSK 408
Query: 487 QTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
T +++D + + A ++ M++L
Sbjct: 409 VTYTILIDTFARSDNMEKAIQLRLSMEEL 437
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 105/208 (50%), Gaps = 2/208 (0%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++D V ++ + +L ++ S+G +L T ++ F G A + E+
Sbjct: 341 YNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEME 400
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVD 254
G++ + T +L+DT + +E A + L ++ + P+ HT+++ IHG+C +++
Sbjct: 401 ERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMN 460
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA + M C P + Y+T+I YC++ + + +LL EM+ + PNV +Y ++
Sbjct: 461 EASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMI 520
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDS 342
L K +EA R+ EKM G P +
Sbjct: 521 EVLCKERKSKEAERLVEKMIDSGIDPST 548
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 104/254 (40%), Gaps = 38/254 (14%)
Query: 275 YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKS-------------- 320
Y II SY + + + +EM G P + +++++ S
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 321 --------------------GDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
G+ E++ + ++ G P+ + LI + +++
Sbjct: 157 SKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEK 216
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
A ++ EM + G+ + T+ +I +G ++ F + E+M + + PN+ T++ +
Sbjct: 217 AKDLF-FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQE-DGVFPNLYTYNCV 274
Query: 421 LKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH 480
+ K G+T + Q+ D+M + +S +I TY +I GLCR K A + +M
Sbjct: 275 MNQLCKDGRTKDAF-QVFDEM-RERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSD 332
Query: 481 DITPRYQTCRLILD 494
I P T ++D
Sbjct: 333 GINPNLITYNTLID 346
>gi|224063295|ref|XP_002301082.1| predicted protein [Populus trichocarpa]
gi|222842808|gb|EEE80355.1| predicted protein [Populus trichocarpa]
Length = 509
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 194/402 (48%), Gaps = 16/402 (3%)
Query: 113 DWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM----SKGHIVTL 168
D + AL IF G+ H+ Y ++D L + ++ + ALL +M K H
Sbjct: 62 DPQHALEIFNLVVEQKGFNHNHATYSTIIDKLARAKKFQAVDALLRQMMYETCKFH---E 118
Query: 169 NTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEK-NTETMNLLLDTLCKEGKVELARSVFL 227
+ +M+ F+ + ++E V F+++ EK + + ++ L+ L + +V+L R L
Sbjct: 119 SLFLNLMKYFAKSSEFERVVEMFNKIQPIVREKPSLKAISTCLNLLVESKQVDLLRGFLL 178
Query: 228 ELKS--CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG-CHPCVISYSTIIQSYCR 284
+L + PN FNIFI CK ++ A ++EMK +P +I+YST++ C
Sbjct: 179 DLNKDHMLKPNTCIFNIFIKYHCKSGDLESAFAVVKEMKKSSISYPNLITYSTLMDGLCE 238
Query: 285 QYNFSKVYELLDEMQAQG-CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSR 343
+ EL +EM ++ P+ +TY +++ + G + A +I E MK G P+
Sbjct: 239 SGRLKEAIELFEEMVSKDQILPDALTYNVLINGFSCWGKVDRAKKIMEFMKSNGCSPNVF 298
Query: 344 FFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEE 403
++ L+ + R++EA+ ++ EM G+ DT + +I F G ++A +LEE
Sbjct: 299 NYSALMSGFCKEGRLEEAMDAFE-EMKIFGLKQDTVGYTILINYFCRFGRIDEAMALLEE 357
Query: 404 MNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCR 463
M K CK ++ T + LL+ G+T+E L L + ++ + L+ +Y +V++ LC+
Sbjct: 358 M-KETKCKADIVTVNVLLRGFCGEGRTEEALGML--NRLSSEGIYLNKASYRIVLNSLCQ 414
Query: 464 ANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
+ A L + P + T +L + + M D A
Sbjct: 415 KGDLDKALELLGLTLSRGFVPHHATSNELLVGLCKAGMADDA 456
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 170/346 (49%), Gaps = 9/346 (2%)
Query: 141 VDILGKVRQMDQMRALLEEMSKGHIVTLNT-IAKVMRRF-SGAGQWEDAVRTFDELGTFG 198
+++L + +Q+D +R L +++K H++ NT I + ++ +G E A E+
Sbjct: 161 LNLLVESKQVDLLRGFLLDLNKDHMLKPNTCIFNIFIKYHCKSGDLESAFAVVKEMKKSS 220
Query: 199 LE-KNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVDE 255
+ N T + L+D LC+ G+++ A +F E+ K I P+A T+N+ I+G+ +VD
Sbjct: 221 ISYPNLITYSTLMDGLCESGRLKEAIELFEEMVSKDQILPDALTYNVLINGFSCWGKVDR 280
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
A+ ++ MK +GC P V +YS ++ +C++ + + +EM+ G + V YT +++
Sbjct: 281 AKKIMEFMKSNGCSPNVFNYSALMSGFCKEGRLEEAMDAFEEMKIFGLKQDTVGYTILIN 340
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
Y + G +EA+ + E+MK K D N L+ R +EA+ + + G+
Sbjct: 341 YFCRFGRIDEAMALLEEMKETKCKADIVTVNVLLRGFCGEGRTEEALGMLN-RLSSEGIY 399
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS 435
+ +++ ++ G +KA +L + P+ T + LL K G D+ +
Sbjct: 400 LNKASYRIVLNSLCQKGDLDKALELL-GLTLSRGFVPHHATSNELLVGLCKAGMADDAVV 458
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHD 481
L + + + ++ L++ +CR K A+ L E+ ++
Sbjct: 459 ALYG--LAEMGFKPEQDSWALLVEFVCRERKLLLAFELLDELTANE 502
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 92/180 (51%), Gaps = 8/180 (4%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQW 184
G + + Y ++++ + ++D+ ALLEEM K IVT+N + +R F G G+
Sbjct: 327 GLKQDTVGYTILINYFCRFGRIDEAMALLEEMKETKCKADIVTVNVL---LRGFCGEGRT 383
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIF 243
E+A+ + L + G+ N + ++L++LC++G ++ A + L L P+ T N
Sbjct: 384 EEALGMLNRLSSEGIYLNKASYRIVLNSLCQKGDLDKALELLGLTLSRGFVPHHATSNEL 443
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
+ G CK D+A + + G P S++ +++ CR+ +ELLDE+ A C
Sbjct: 444 LVGLCKAGMADDAVVALYGLAEMGFKPEQDSWALLVEFVCRERKLLLAFELLDELTANEC 503
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 105/246 (42%), Gaps = 3/246 (1%)
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLD-EMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
P IS+ T + + + E+ + ++ +G N TY+T++ LA++ F+
Sbjct: 45 PKFISHETAVNLIKHERDPQHALEIFNLVVEQKGFNHNHATYSTIIDKLARAKKFQAVDA 104
Query: 329 ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF 388
+ +M K F L+ ++S + V ++ P P +T + +
Sbjct: 105 LLRQMMYETCKFHESLFLNLMKYFAKSSEFERVVEMFNKIQPIVREKPSLKAISTCLNLL 164
Query: 389 SHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
+ L ++NK KPN F+ +K K+G + + ++ +M
Sbjct: 165 VESKQVDLLRGFLLDLNKDHMLKPNTCIFNIFIKYHCKSGDLESAFA-VVKEMKKSSISY 223
Query: 449 LDITTYTLVIHGLCRANKCEWAYLLFKEMIGHD-ITPRYQTCRLILDEVKQKHMYDAAEK 507
++ TY+ ++ GLC + + + A LF+EM+ D I P T ++++ D A+K
Sbjct: 224 PNLITYSTLMDGLCESGRLKEAIELFEEMVSKDQILPDALTYNVLINGFSCWGKVDRAKK 283
Query: 508 IEAVMK 513
I MK
Sbjct: 284 IMEFMK 289
>gi|15221893|ref|NP_173324.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42571539|ref|NP_973860.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75151479|sp|Q8GYP6.1|PPR49_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18900
gi|26450017|dbj|BAC42129.1| unknown protein [Arabidopsis thaliana]
gi|28827402|gb|AAO50545.1| unknown protein [Arabidopsis thaliana]
gi|332191657|gb|AEE29778.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332191658|gb|AEE29779.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 860
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 178/364 (48%), Gaps = 18/364 (4%)
Query: 66 DIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAG 125
++ ++ + G + +E Q+L ++ Y N+++ + +D+ +ALG F W
Sbjct: 304 NVSSVLRRFRWGPAAEEALQNL-------GLRIDAYQANQVLKQM-NDYGNALGFFYWLK 355
Query: 126 SCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKG----HIVTLNTIAKVMRRFSGA 181
PG++H Y MV LG+ +Q + LL+EM + + VT N +++ + A
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYN---RLIHSYGRA 412
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTF 240
+A+ F+++ G + + T L+D K G +++A ++ +++ + P+ T+
Sbjct: 413 NYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTY 472
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
++ I+ K + A EM GC P +++Y+ ++ + + N+ +L +MQ
Sbjct: 473 SVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQN 532
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
G P+ VTY+ VM L G EEA + +M+ PD + L+ G+A V++
Sbjct: 533 AGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEK 592
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
A YQ M G+ P+ T N++++ F +A+ +L+ M L +P++QT+ L
Sbjct: 593 AWQWYQA-MLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLAL-GLRPSLQTYTLL 650
Query: 421 LKSC 424
L C
Sbjct: 651 LSCC 654
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 154/333 (46%), Gaps = 13/333 (3%)
Query: 161 SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVE 220
+ GHIV ++ V+RRF +W A + L GL + N +L + G
Sbjct: 297 NSGHIV--ENVSSVLRRF----RWGPAAE--EALQNLGLRIDAYQANQVLKQMNDYGNA- 347
Query: 221 LARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQ 280
L +L+ + + HT+ + + + + EM GC P ++Y+ +I
Sbjct: 348 LGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIH 407
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
SY R ++ + ++MQ GC P+ VTY T++ AK+G + A+ + ++M+ G P
Sbjct: 408 SYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSP 467
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
D+ ++ +I LG+A + A ++ EM + G P+ T+N M+ + + +++ A +
Sbjct: 468 DTFTYSVIINCLGKAGHLPAAHKLF-CEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKL 526
Query: 401 LEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHG 460
+M +P+ T+ +++ G +E + +M K+ + D Y L++
Sbjct: 527 YRDMQNAGF-EPDKVTYSIVMEVLGHCGYLEEA-EAVFTEMQQKNWIP-DEPVYGLLVDL 583
Query: 461 LCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
+A E A+ ++ M+ + P TC +L
Sbjct: 584 WGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLL 616
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 81/175 (46%), Gaps = 10/175 (5%)
Query: 337 GSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEK 396
G K D + ++ LGRA + A+ EM +G P+T T+N +I + + +
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFG-AINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNE 417
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHH---LSLDITT 453
A +V +M + CKP+ T+ L+ K G D + DM + LS D T
Sbjct: 418 AMNVFNQMQE-AGCKPDRVTYCTLIDIHAKAGFLDIAM-----DMYQRMQAGGLSPDTFT 471
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
Y+++I+ L +A A+ LF EM+ TP T +++D + Y A K+
Sbjct: 472 YSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKL 526
>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
Length = 583
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 161/340 (47%), Gaps = 6/340 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVT-LNTIAKVMRRFSGAGQWEDA 187
G E + Y ++VD L R + ++ AL EM ++V + V+ + AG A
Sbjct: 242 GIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRA 301
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHG 246
+ DE G+E N T +L++ CK G++E A + +++ + N FN I G
Sbjct: 302 AKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDG 361
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
+C+ VD+A M+ G + +Y+T+ CR + LL M G PN
Sbjct: 362 YCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPN 421
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
VTYTT++S K GD EA R+ +M G+ P +N +I + ++EA ++
Sbjct: 422 YVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAER-FR 480
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
EM + G PD T+ +++ +G + A + EEM K +PNV + L+ K
Sbjct: 481 KEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEM-KQRGTEPNVVAYTALISGLAK 539
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANK 466
G++ E QL DDM+ K L D + Y+ ++ L N+
Sbjct: 540 EGRS-EAAFQLYDDML-KAGLIPDDSLYSALVGSLHTDNR 577
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 174/368 (47%), Gaps = 16/368 (4%)
Query: 117 ALGIF-RWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLN-----T 170
A G+ R GSCPG S ++VD L K ++D R LL++M + H V+LN +
Sbjct: 160 AAGLLERALGSCPG-SVSPLAASVVVDGLCKSGRVDDARRLLDDMPR-HGVSLNALCYNS 217
Query: 171 IAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK 230
+ R G+ ++ + + G+E T +L+D+L + ++F E+K
Sbjct: 218 LLDCYVRQKDDGRVQEILEIME---NEGIEATVGTYTILVDSLSTARDISKVEALFNEMK 274
Query: 231 SC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFS 289
+ + + + + I+ +C+ + A + E G+G P +Y +I +C+
Sbjct: 275 ANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQME 334
Query: 290 KVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
LL +MQ QG N + + T++ + G ++A++I M+ +G + D +N L
Sbjct: 335 AAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLA 394
Query: 350 YTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH 409
L R +R+ EA + + M E GV P+ T+ T+I++ G +A + EM + +
Sbjct: 395 CGLCRVNRLDEAKTLLHI-MIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAE-KG 452
Query: 410 CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEW 469
P+V T++ ++ K G E ++ + K D+ TY ++HG C K +
Sbjct: 453 ATPSVVTYNVMIDGYTKKGSIRE--AERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDV 510
Query: 470 AYLLFKEM 477
A LF+EM
Sbjct: 511 ALKLFEEM 518
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 116/248 (46%), Gaps = 4/248 (1%)
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
++ + G CK RVD+A+ + +M HG + Y++++ Y RQ + +V E+L+ M+
Sbjct: 181 SVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMEN 240
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
+G V TYT ++ L+ + D + + +MK D + +I RA ++
Sbjct: 241 EGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRR 300
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
A V E NGV P+ T+ +I F G E A +L +M + N F+ +
Sbjct: 301 AAKVLD-ECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQG-QGVGLNQIIFNTM 358
Query: 421 LKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH 480
+ + G D+ L + + K + LDI TY + GLCR N+ + A L MI
Sbjct: 359 IDGYCRKGMVDDALK--IKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEM 416
Query: 481 DITPRYQT 488
+ P Y T
Sbjct: 417 GVVPNYVT 424
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 153/336 (45%), Gaps = 6/336 (1%)
Query: 181 AGQWEDAVRTFDE-LGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAH 238
AG+ DA + LG+ + ++++D LCK G+V+ AR + ++ + + NA
Sbjct: 154 AGRLADAAGLLERALGSCPGSVSPLAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNAL 213
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
+N + + + Q ++ M+ G V +Y+ ++ S + SKV L +EM
Sbjct: 214 CYNSLLDCYVRQKDDGRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEM 273
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRV 358
+A +V YT V++ ++G+ A ++ ++ G +P+ R + LI + ++
Sbjct: 274 KANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQM 333
Query: 359 QEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFH 418
EA + +M GV + FNTMI + G + A + M K+ + ++ T++
Sbjct: 334 -EAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKM-GVELDIYTYN 391
Query: 419 PLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
L + + DE LL M+ + + + TYT +I C+ A LF+EM
Sbjct: 392 TLACGLCRVNRLDEA-KTLLHIMI-EMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMA 449
Query: 479 GHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
TP T +++D +K AE+ M+K
Sbjct: 450 EKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEK 485
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 93/243 (38%), Gaps = 39/243 (16%)
Query: 273 ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEK 332
++ S ++ C+ LLD+M G N + Y +++ + D I E
Sbjct: 178 LAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEI 237
Query: 333 MKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
M+ G + + L+ +L A + + ++ EM N V D + +I + G
Sbjct: 238 MENEGIEATVGTYTILVDSLSTARDISKVEALFN-EMKANNVVGDVYLYTAVINAYCRAG 296
Query: 393 HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
+ +A VL DEC+ + + +
Sbjct: 297 NMRRAAKVL-----------------------------DECVG---------NGVEPNER 318
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
TY ++I+G C+ + E A +L +M G + ++D +K M D A KI+A M
Sbjct: 319 TYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAM 378
Query: 513 KKL 515
+K+
Sbjct: 379 EKM 381
>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
Length = 545
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 132/277 (47%), Gaps = 5/277 (1%)
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYEL 294
P+ F + I+G C+ R+DEA ++ GC P ++Y+ I C+ ++L
Sbjct: 5 PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64
Query: 295 LDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGR 354
L +M + C P VTYT ++ L K+G +EA+ + E+M G+ P + + +I L +
Sbjct: 65 LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSK 124
Query: 355 ASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH---CK 411
A RV+EA ++ V+M NG PD + +I G E+A+ + +E N +H
Sbjct: 125 AGRVEEARRIF-VDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAV 183
Query: 412 PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAY 471
P+V T+ L+ K G+ E Q+ DD + D TYT +I GLC+ + E
Sbjct: 184 PDVVTYTSLIDGLCKAGRILEA-RQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGC 242
Query: 472 LLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
F EM P T ++D + M A ++
Sbjct: 243 ERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRV 279
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 177/380 (46%), Gaps = 12/380 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +VD L K ++D+ A+LE+M KG+ TL T V+ S AG+ E+A R F ++
Sbjct: 80 YTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDML 139
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-----SCIPPNAHTFNIFIHGWCKI 250
G + L+ LCK GK E A +++ E + P+ T+ I G CK
Sbjct: 140 GNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKA 199
Query: 251 NRVDEAQWTI-QEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
R+ EA+ E G P ++Y++II C+ + E EM+ +G P+ VT
Sbjct: 200 GRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVT 259
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM 369
Y ++ K+ +A R+ +M G+ + +N ++ L +A RV EA Y + M
Sbjct: 260 YAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEA-YATFLAM 318
Query: 370 PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
E G T++ ++ F G+ A + M C+PN+ +++ +++ + GK
Sbjct: 319 EERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLD-RGCEPNLVSYNIIIRGLCRAGK 377
Query: 430 TDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC-RANKCEWAYLLFKEMIGHDITPRYQT 488
+ + + + + L D+ T+ +HGLC R + LF+ M+ +P +
Sbjct: 378 LAK--AYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHS 435
Query: 489 CRLILDEVKQKHMYDAAEKI 508
+++D + + + A +I
Sbjct: 436 YSILMDGICRAGGLEVALEI 455
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 108/438 (24%), Positives = 193/438 (44%), Gaps = 19/438 (4%)
Query: 60 DSPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWK--SA 117
+SP L V+I + +E + + D + N +P ++ LI K A
Sbjct: 108 NSPTLKTYTVVIDGLSKAGRVEEA-RRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEA 166
Query: 118 LGIFRWAGSCPGYEHSSEI-----YEMMVDILGKVRQMDQMRALL--EEMSKGHIVTLNT 170
+++ A + H++ + Y ++D L K ++ + R + E + +G I T
Sbjct: 167 YALYKEANA--RKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVT 224
Query: 171 IAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-L 229
++ G+ E+ F E+ G E + T L+D K + A V+ + L
Sbjct: 225 YTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQML 284
Query: 230 KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFS 289
+S + T+NI + G CK RV EA T M+ GC V++YS ++ +C + N S
Sbjct: 285 QSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVS 344
Query: 290 KVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
EL M +GC PN+V+Y ++ L ++G +A EK+ PD FN +
Sbjct: 345 AAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFL 404
Query: 350 YTL-GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
+ L R V + V +++ M G +P+ +++ ++ G E A + EM
Sbjct: 405 HGLCQRLDTVSDGVELFE-SMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVS-R 462
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
P+V F+ L++ G+ DE L ++ ++ + + D +Y ++ GL R + E
Sbjct: 463 GVAPDVVVFNTLIRWLCIAGRVDEAL-EVFRELERRS--APDAWSYWSLLDGLSRCERME 519
Query: 469 WAYLLFKEMIGHDITPRY 486
A LL M PR+
Sbjct: 520 EARLLSFHMKLQGCAPRH 537
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 185/395 (46%), Gaps = 13/395 (3%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDA 187
G E Y + +D L K ++D LL++M K + T T ++ AG+ ++A
Sbjct: 37 GCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEA 96
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHG 246
+ +++ G +T +++D L K G+VE AR +F++ L + P+A + I G
Sbjct: 97 MAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKG 156
Query: 247 WCKINRVDEAQWTIQEMKGHGCH----PCVISYSTIIQSYCRQYNFSKVYELLD-EMQAQ 301
CK + +EA +E H P V++Y+++I C+ + ++ D E +
Sbjct: 157 LCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVER 216
Query: 302 GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
G P+ VTYT+++ L K G EE +M+ G +PD+ + LI +A + +A
Sbjct: 217 GFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKA 276
Query: 362 VYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLL 421
VY+ +M ++G T T+N ++ G +A+ M + C V T+ L+
Sbjct: 277 HRVYR-QMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEE-RGCVATVVTYSALM 334
Query: 422 KSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHD 481
G + +L M+++ ++ +Y ++I GLCRA K AY F++++
Sbjct: 335 DGFCSEGNVSAAV-ELFRRMLDRG-CEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRR 392
Query: 482 ITPRYQTCRLILDEVKQK--HMYDAAEKIEAVMKK 514
+ P T L + Q+ + D E E+++ +
Sbjct: 393 LCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQ 427
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 112/230 (48%), Gaps = 5/230 (2%)
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
C P +++++ +I CR+ + + +L+ GC P+ VTY + L K+ ++A
Sbjct: 3 CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAF 62
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITM 387
++ +KM P + + L+ L +A R+ EA+ V + +M E G +P T+ +I
Sbjct: 63 QLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLE-QMVEKGNSPTLKTYTVVIDG 121
Query: 388 FSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHL 447
S G E+A + +M C+P+ + L+K K+GK +E + + KHH
Sbjct: 122 LSKAGRVEEARRIFVDMLG-NGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHA 180
Query: 448 SL--DITTYTLVIHGLCRANKCEWAYLLF-KEMIGHDITPRYQTCRLILD 494
+ D+ TYT +I GLC+A + A +F E + P T I+D
Sbjct: 181 TAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIID 230
>gi|255553139|ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543244|gb|EEF44776.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 794
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 105/388 (27%), Positives = 181/388 (46%), Gaps = 11/388 (2%)
Query: 109 RFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVT 167
+ +D WK L RW C + Y ++D K ++ L +E+ KG + T
Sbjct: 187 KVEDGWK--LIEKRWGRGC---MPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPT 241
Query: 168 LNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEG-KVELARSVF 226
+ T ++ F G++E + E+ GL+ + N ++D K G ++E A +V
Sbjct: 242 VKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVG 301
Query: 227 LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQY 286
+KS P+ T+NI I G C V +A+ +++ G P +SY+ +I +YC+Q
Sbjct: 302 WMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQG 361
Query: 287 NFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFN 346
+ + +LL +M +G P++VTY ++ L +G+ + A+ + KM G PD+ +N
Sbjct: 362 EYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYN 421
Query: 347 CLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNK 406
L+ L + R+ A V EM + VAPD T++ F HG E+A L E+
Sbjct: 422 VLMSGLCKKGRL-PAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEA-KKLFELTI 479
Query: 407 LEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANK 466
+ P V ++ ++K K G + L M+ H S D TY+ +I G + N
Sbjct: 480 EKGIDPGVVGYNAMIKGYCKFGMMKDAL-LCFKRMIQGLH-SPDEFTYSTIIDGYIKMND 537
Query: 467 CEWAYLLFKEMIGHDITPRYQTCRLILD 494
A +F M+ P T L+++
Sbjct: 538 LHGALRMFGLMVKGACKPNVVTYTLLIN 565
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 176/383 (45%), Gaps = 15/383 (3%)
Query: 133 SSEIYEMMVDILGKVRQMDQMRALLEEMSKGH-----IVTLNTIAKVMRRFSGAGQWEDA 187
+ E + +++ + +D+ K H + + N++ V+ + G+ E A
Sbjct: 100 TREAFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCNSLLNVLVKH---GKVEIA 156
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIH 245
+ +DE+ E + T+ +++ LCKEGKVE + + + C+P N +N I
Sbjct: 157 CKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGCMP-NIVFYNTLID 215
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G+CK + A +E+K G P V +Y II +C++ F V +LL EM +G
Sbjct: 216 GYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDV 275
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
++ Y ++ K G EA M G PD +N LI V +A +
Sbjct: 276 SIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLL 335
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
+ + + G+ P+ ++ +I + G + +A +L +M++ H KP++ T+ L+
Sbjct: 336 E-QAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGH-KPDLVTYAALIHGLI 393
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
G+ D L+ + + MV K L D Y +++ GLC+ + A +L EM+ ++ P
Sbjct: 394 VAGEVDVALT-VRNKMVEKGVLP-DANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPD 451
Query: 486 YQTCRLILDEVKQKHMYDAAEKI 508
++D + ++ A+K+
Sbjct: 452 AFITATLVDGFIRHGDFEEAKKL 474
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 149/311 (47%), Gaps = 13/311 (4%)
Query: 207 NLLLDTLCKEGKVELARSVFLELKSCIPPNA----HTFNIFIHGWCKINRVDEAQWTIQE 262
N LL+ L K GKVE+A V+ E+ + N +T I + G CK +V++ I++
Sbjct: 141 NSLLNVLVKHGKVEIACKVYDEM---VDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEK 197
Query: 263 MKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGD 322
G GC P ++ Y+T+I YC++ + + L E++ +G P V TY +++ K G
Sbjct: 198 RWGRGCMPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGK 257
Query: 323 FEEAIRITEKMKIVGSKPDSRFFNCLI-YTLGRASRVQEAVYVYQVEMPENGVAPDTSTF 381
FE ++ +M G +N +I R++ A V M ++G PD +T+
Sbjct: 258 FEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGW--MIKSGCDPDMATY 315
Query: 382 NTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDM 441
N +IT G KA +LE+ K PN ++ PL+ + K G+ L LL M
Sbjct: 316 NILITGSCSCGEVHKAEQLLEQAIK-RGLLPNKVSYTPLIHNYCKQGEYLRAL-DLLIKM 373
Query: 442 VNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHM 501
+ H D+ TY +IHGL A + + A + +M+ + P +++ + +K
Sbjct: 374 SERGH-KPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGR 432
Query: 502 YDAAEKIEAVM 512
AA+ + A M
Sbjct: 433 LPAAKVLLAEM 443
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 96/425 (22%), Positives = 176/425 (41%), Gaps = 39/425 (9%)
Query: 36 VSSSP-IESYCSDGARLDHHQVLCVDSPR--LPDIDVIISKVH--VGSSEDEVFQSLKQD 90
VS +P I +YC G L +L S R PD+ + +H + + E +V +++
Sbjct: 348 VSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNK 407
Query: 91 HVCNAIQPSHYLVNKLIHRF-KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQ 149
V + P + N L+ K A + + I +VD +
Sbjct: 408 MVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGD 467
Query: 150 MDQMRALLE-EMSKG---HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTE- 204
++ + L E + KG +V N + K +F G +DA+ F + GL E
Sbjct: 468 FEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKF---GMMKDALLCFKRM-IQGLHSPDEF 523
Query: 205 TMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
T + ++D K + A +F L +K PN T+ + I+G+C ++ A+ T ++M
Sbjct: 524 TYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQM 583
Query: 264 KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF 323
P V++Y+ +I +C+ N +K ++M + C PN VTY +M+ L + DF
Sbjct: 584 LSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLMNGLTNNVDF 643
Query: 324 ----------EEAIRITEKMKIVGSKPDSRF--FNCLIYTLGRASRVQEAVYVYQVEMPE 371
E ++ + ++ D R +N ++ L + V+ A+++ +M
Sbjct: 644 VISNQRSEQTENSLVLESFGMMISDGWDRRAASYNSILICLCQHKMVKHALHLRD-KMMS 702
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
G PD + ++ G ++ N + CK N + +K + K D
Sbjct: 703 KGFLPDPVSLVALLHGLCLEGRS-------QDWNNVISCKLNERELQVAVKY---SEKLD 752
Query: 432 ECLSQ 436
LSQ
Sbjct: 753 AFLSQ 757
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 81/186 (43%), Gaps = 3/186 (1%)
Query: 323 FEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFN 382
F E + + MK P F+ +I V A+ Y+ + + PD + N
Sbjct: 82 FSEVESLLKIMKSKDLMPTREAFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCN 141
Query: 383 TMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMV 442
+++ + HG E A V +EM + + + T ++K K GK ++ +L++
Sbjct: 142 SLLNVLVKHGKVEIACKVYDEMVD-RNGEVDNYTVCIMVKGLCKEGKVEDGW-KLIEKRW 199
Query: 443 NKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMY 502
+ + +I Y +I G C+ E A +LFKE+ P +T I++ +K +
Sbjct: 200 GRGCMP-NIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKF 258
Query: 503 DAAEKI 508
+ +K+
Sbjct: 259 EVVDKL 264
>gi|357465315|ref|XP_003602939.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491987|gb|AES73190.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 110/422 (26%), Positives = 200/422 (47%), Gaps = 29/422 (6%)
Query: 99 SHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLE 158
+H + LI R KD + AL IF G+ H++ Y ++ L + ++ + +L
Sbjct: 132 THDVAINLIKREKDP-QHALKIFNMVSEQKGFNHNNATYATILQKLAQFKKFQAVDRVLH 190
Query: 159 EMS-------KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEK-NTETMNLLL 210
+M+ +G + L M+ +S G E F + T EK + + ++ L
Sbjct: 191 QMTYEACKFHEGVFINL------MKHYSKCGFHEKVFDAFLSIQTIVREKPSPKAISSCL 244
Query: 211 DTLCKEGKVELARSVFLELKSCI--PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG- 267
+ L +V+L R + L K + PN FNI + C+ +D A ++EM+
Sbjct: 245 NLLVDSNQVDLVRKLLLYAKRSLVYKPNVCIFNILVKYHCRRGDIDSAFEVVKEMRNSKY 304
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG-CPPNVVTYTTVMSYLAKSGDFEEA 326
+P VI+YST++ CR + +EL +EM ++ P+ +TY +++ + G + A
Sbjct: 305 SYPNVITYSTLMDGLCRNGRLKEAFELFEEMVSKDQIVPDPLTYNVLINGFCREGKADRA 364
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
+ E MK G P+ ++ L+ L +A ++Q+A V EM +G+ PD T+ ++I
Sbjct: 365 RNVIEFMKNNGCCPNVFNYSALVDGLCKAGKLQDAKGVL-AEMKSSGLKPDAITYTSLIN 423
Query: 387 MFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK-- 444
FS +G ++A +L EM K C+ + TF+ +L + G+ DE L DM+ K
Sbjct: 424 FFSRNGQIDEAIELLTEM-KENDCQADTVTFNVILGGLCREGRFDEAL-----DMIEKLP 477
Query: 445 -HHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYD 503
+ L+ +Y +V++ L + + A L M+ P Y T +L + ++ M +
Sbjct: 478 QQGVYLNKGSYRIVLNSLTQNCELRKANKLLGLMLSRGFVPHYATSNELLVRLCKEGMAN 537
Query: 504 AA 505
A
Sbjct: 538 DA 539
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 145/279 (51%), Gaps = 6/279 (2%)
Query: 202 NTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVDEAQWT 259
N T + L+D LC+ G+++ A +F E+ K I P+ T+N+ I+G+C+ + D A+
Sbjct: 308 NVITYSTLMDGLCRNGRLKEAFELFEEMVSKDQIVPDPLTYNVLINGFCREGKADRARNV 367
Query: 260 IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK 319
I+ MK +GC P V +YS ++ C+ +L EM++ G P+ +TYT+++++ ++
Sbjct: 368 IEFMKNNGCCPNVFNYSALVDGLCKAGKLQDAKGVLAEMKSSGLKPDAITYTSLINFFSR 427
Query: 320 SGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTS 379
+G +EAI + +MK + D+ FN ++ L R R EA+ + + ++P+ GV +
Sbjct: 428 NGQIDEAIELLTEMKENDCQADTVTFNVILGGLCREGRFDEALDMIE-KLPQQGVYLNKG 486
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLD 439
++ ++ + + KA +L M P+ T + LL K G ++ + L D
Sbjct: 487 SYRIVLNSLTQNCELRKANKLLGLMLSRGFV-PHYATSNELLVRLCKEGMANDAATALFD 545
Query: 440 DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
+ D ++ L+I +CR K + + L E++
Sbjct: 546 LVDMGFQPQHD--SWELLIDLICRDRKLLYVFELLDELV 582
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 115/292 (39%), Gaps = 47/292 (16%)
Query: 82 EVFQSLKQDHVCNAIQPSHYLVNKLIHRF-----KDDWKSALGIFRWAGSCPGYEHSSEI 136
E F+ ++ + I P N LI+ F D ++ + + G CP +
Sbjct: 327 EAFELFEEMVSKDQIVPDPLTYNVLINGFCREGKADRARNVIEFMKNNGCCPNVFN---- 382
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +VD L K ++ + +L EM S G T ++ FS GQ ++A+ E+
Sbjct: 383 YSALVDGLCKAGKLQDAKGVLAEMKSSGLKPDAITYTSLINFFSRNGQIDEAIELLTEMK 442
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDE 255
+ +T T N++L LC+EG R DE
Sbjct: 443 ENDCQADTVTFNVILGGLCREG----------------------------------RFDE 468
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
A I+++ G + SY ++ S + K +LL M ++G P+ T ++
Sbjct: 469 ALDMIEKLPQQGVYLNKGSYRIVLNSLTQNCELRKANKLLGLMLSRGFVPHYATSNELLV 528
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
L K G +A + +G +P + LI + R ++ +YV+++
Sbjct: 529 RLCKEGMANDAATALFDLVDMGFQPQHDSWELLIDLICRDRKL---LYVFEL 577
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/278 (19%), Positives = 109/278 (39%), Gaps = 39/278 (14%)
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA------- 326
+Y+TI+Q + F V +L +M + C + + +M + +K G E+
Sbjct: 168 TYATILQKLAQFKKFQAVDRVLHQMTYEACKFHEGVFINLMKHYSKCGFHEKVFDAFLSI 227
Query: 327 ---IRITEKMKIVGS---------------------------KPDSRFFNCLIYTLGRAS 356
+R K + S KP+ FN L+ R
Sbjct: 228 QTIVREKPSPKAISSCLNLLVDSNQVDLVRKLLLYAKRSLVYKPNVCIFNILVKYHCRRG 287
Query: 357 RVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQT 416
+ A V + P+ T++T++ +G ++AF + EEM + P+ T
Sbjct: 288 DIDSAFEVVKEMRNSKYSYPNVITYSTLMDGLCRNGRLKEAFELFEEMVSKDQIVPDPLT 347
Query: 417 FHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKE 476
++ L+ + GK D + + + + + ++ Y+ ++ GLC+A K + A + E
Sbjct: 348 YNVLINGFCREGKADRARNVI--EFMKNNGCCPNVFNYSALVDGLCKAGKLQDAKGVLAE 405
Query: 477 MIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
M + P T +++ + D A ++ MK+
Sbjct: 406 MKSSGLKPDAITYTSLINFFSRNGQIDEAIELLTEMKE 443
>gi|255660920|gb|ACU25629.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
Length = 484
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 101/389 (25%), Positives = 193/389 (49%), Gaps = 14/389 (3%)
Query: 100 HYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEE 159
H LV ++H K + AL FRW +EH+ E + +++ILG+ +++ R +L +
Sbjct: 12 HELVYNVLHGSKTS-EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLD 70
Query: 160 M-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
M KG + ++ + G +++V+ F ++ G+E+ ++ + L + + G+
Sbjct: 71 MPKKGLEWDEDMWVLMIDSYGKEGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGR 130
Query: 219 VELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
+A+ F + L I P H FN+ I G+ +V+ A ++MK P VI+Y+T
Sbjct: 131 FMMAKRYFNKMLSEGIEPTRHXFNVMIWGFFLSGKVETANRFFEDMKSREISPDVITYNT 190
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+I Y R + + EM+ + P VVTYTT++ ++A+R+ E+MK G
Sbjct: 191 MINGYYRVKKMDEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGYG 250
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP-DTSTFNTMITMFSHHGHHEK 396
KP++ ++ L+ L A ++ EA + + EM + +AP D S F +I+ G+ +
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMSEARSILK-EMVDKYMAPTDNSIFXRLISSQCKTGNLDA 309
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK-------HHLSL 449
A VL+ M +L + L+++ K G+ D+ + +LLD ++ K L +
Sbjct: 310 AADVLKAMIRLS-VPTEAGHYGVLIENFCKAGQHDKAV-KLLDKLIEKDIILRPQSTLHM 367
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMI 478
+ + Y +I LC + A L ++++
Sbjct: 368 EPSAYNPMIEYLCNNGQTAKAEALVRQLL 396
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 128/267 (47%), Gaps = 6/267 (2%)
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
+ ++++ A+ + +M G + +I SY ++ + +L +M+ G +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVLMIDSYGKEGIVQESVKLFQKMEELGVERTIK 116
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
+Y + + + G F A R KM G +P FN +I+ + +V+ A ++ +
Sbjct: 117 SYDALFKVILRRGRFMMAKRYFNKMLSEGIEPTRHXFNVMIWGFFLSGKVETANRFFE-D 175
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M ++PD T+NTMI + ++A EM K + +P V T+ L+K
Sbjct: 176 MKSREISPDVITYNTMINGYYRVKKMDEAEKYFVEM-KGRNIEPTVVTYTTLIKGYVSVD 234
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ D+ L +L+++M + + + TY+ ++ GLC A K A + KEM+ + P +
Sbjct: 235 QVDDAL-RLVEEM-KGYGIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYMAPTDNS 292
Query: 489 C--RLILDEVKQKHMYDAAEKIEAVMK 513
RLI + K ++ AA+ ++A+++
Sbjct: 293 IFXRLISSQCKTGNLDAAADVLKAMIR 319
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 5/205 (2%)
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N T+ ++ L ++ A I M G + D + +I + G+ VQE+V ++
Sbjct: 44 NRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVLMIDSYGKEGIVQESVKLF 103
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
Q +M E GV +++ + + G A +M E +P F+ ++ F
Sbjct: 104 Q-KMEELGVERTIKSYDALFKVILRRGRFMMAKRYFNKMLS-EGIEPTRHXFNVMIWGFF 161
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
+GK E ++ +DM ++ +S D+ TY +I+G R K + A F EM G +I P
Sbjct: 162 LSGKV-ETANRFFEDMKSRE-ISPDVITYNTMINGYYRVKKMDEAEKYFVEMKGRNIEPT 219
Query: 486 YQT-CRLILDEVKQKHMYDAAEKIE 509
T LI V + DA +E
Sbjct: 220 VVTYTTLIKGYVSVDQVDDALRLVE 244
>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 675
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 176/369 (47%), Gaps = 6/369 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G E S+ Y+ ++ + Q+D+ L EEM S+G + TL T +M G+ DA
Sbjct: 255 GLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDA 314
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHG 246
+ D + L + + N L+ + G + A +F EL+ + P+ T+N I G
Sbjct: 315 RKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDG 374
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C++ +D A EM HG P V +++ +++ +C+ N EL DEM +G P+
Sbjct: 375 LCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPD 434
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
Y T + K GD +A + E+M G PD +N I L + ++EA + +
Sbjct: 435 RFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVK 494
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
+M NG+ PD T+ ++I GH KA V EM + P+V T+ L+ S
Sbjct: 495 -KMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLS-KGIFPSVVTYTVLIHSYAV 552
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
G+ + + +++ + ++ TY +I+GLC+ K + AY F EM I+P
Sbjct: 553 RGRLKLAILHFFE--MHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNK 610
Query: 487 QTCRLILDE 495
T ++++E
Sbjct: 611 YTYTILINE 619
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 188/389 (48%), Gaps = 13/389 (3%)
Query: 117 ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEE-----MSKGHIVTLNTI 171
AL FRWA G++ S Y +++DIL + M ++E+ M G + L
Sbjct: 64 ALRFFRWAERQTGFKRSELTYAVILDILARNGLMRSAYCVMEKVVSVKMENGVVDVLILD 123
Query: 172 AKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLC-KEGKVELARSVFLELK 230
+ ++ E + F ++ + G+ + + N +L L ++ +++AR V+ +
Sbjct: 124 LLLWI-YAKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMV 182
Query: 231 SC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFS 289
C I P T+N + +CK +V EA + +M+ GC P ++Y+ ++
Sbjct: 183 ECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELE 242
Query: 290 KVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
+ EL+ EM G + TY ++ + G +EA R+ E+M G+ P +N ++
Sbjct: 243 QAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIM 302
Query: 350 YTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH 409
Y L + RV +A + V + +N + PD ++NT+I ++ G+ +AF + E+ +
Sbjct: 303 YGLCKWGRVSDARKLLDVMVNKN-LMPDLVSYNTLIYGYTRLGNIGEAFLLFAEL-RFRG 360
Query: 410 CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEW 469
P+V T++ L+ + G D + +L D+M+ KH D+ T+T+++ G C+
Sbjct: 361 LVPSVVTYNTLIDGLCRMGDLDVAM-RLKDEMI-KHGPDPDVFTFTILVRGFCKLGNLPM 418
Query: 470 AYLLFKEMIGHDITP-RYQTCRLILDEVK 497
A LF EM+ + P R+ I+ E+K
Sbjct: 419 AKELFDEMLNRGLQPDRFAYITRIVGELK 447
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 126/466 (27%), Positives = 217/466 (46%), Gaps = 29/466 (6%)
Query: 35 IVSSSPIESYCSDGARLDHHQVLCVDSPR--LPDIDVIISKVHVG---SSEDEVFQSLKQ 89
+ ++ ++S+C G + Q+L LP+ DV + + G S E E + L Q
Sbjct: 191 VTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPN-DVTYNVLVNGLSHSGELEQAKELIQ 249
Query: 90 DHVCNAIQPSHYLVNKLIHRF----KDDWKSALGIFRWA-GSCPGYEHSSEIYEMMVDIL 144
+ + ++ S Y + LI + + D S LG + G+ P + Y ++ L
Sbjct: 250 EMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVP----TLVTYNTIMYGL 305
Query: 145 GKVRQMDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLE 200
K ++ R LL+ M ++ V+ NT+ R G+ A F EL GL
Sbjct: 306 CKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGE---AFLLFAELRFRGLV 362
Query: 201 KNTETMNLLLDTLCKEGKVELARSVFLELKSCIP-PNAHTFNIFIHGWCKINRVDEAQWT 259
+ T N L+D LC+ G +++A + E+ P P+ TF I + G+CK+ + A+
Sbjct: 363 PSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKEL 422
Query: 260 IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK 319
EM G P +Y T I + + SK + + +EM A+G PP+++TY + L K
Sbjct: 423 FDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHK 482
Query: 320 SGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTS 379
G+ +EA + +KM G PD + +I+ A +++A V+ +EM G+ P
Sbjct: 483 LGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVF-LEMLSKGIFPSVV 541
Query: 380 TFNTMITMFSHHGHHEKA-FHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLL 438
T+ +I ++ G + A H E K H PNV T++ L+ K K D+ +
Sbjct: 542 TYTVLIHSYAVRGRLKLAILHFFEMHEKGVH--PNVITYNALINGLCKVRKMDQAY-KFF 598
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
+M K +S + TYT++I+ C + A L+K+M+ +I P
Sbjct: 599 TEMQAKG-ISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQP 643
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 171/367 (46%), Gaps = 6/367 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
G + Y M+D K ++ + LL +M K G + T ++ S +G+ E A
Sbjct: 185 GIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQA 244
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHG 246
E+ GLE + T + L+ C++G+++ A + E+ S P T+N ++G
Sbjct: 245 KELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYG 304
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
CK RV +A+ + M P ++SY+T+I Y R N + + L E++ +G P+
Sbjct: 305 LCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPS 364
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
VVTY T++ L + GD + A+R+ ++M G PD F L+ + + A ++
Sbjct: 365 VVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFD 424
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
EM G+ PD + T I G KAF + EEM P++ T++ + K
Sbjct: 425 -EMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLA-RGFPPDLITYNVFIDGLHK 482
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
G E S+L+ M+ + L D TYT +IH A A +F EM+ I P
Sbjct: 483 LGNLKEA-SELVKKML-YNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSV 540
Query: 487 QTCRLIL 493
T +++
Sbjct: 541 VTYTVLI 547
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 145/312 (46%), Gaps = 8/312 (2%)
Query: 121 FRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFS 179
R+ G P S Y ++D L ++ +D L +EM K G + T ++R F
Sbjct: 356 LRFRGLVP----SVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFC 411
Query: 180 GAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAH 238
G A FDE+ GL+ + + K G A + E L PP+
Sbjct: 412 KLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLI 471
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
T+N+FI G K+ + EA +++M +G P ++Y++II ++ + K + EM
Sbjct: 472 TYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEM 531
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRV 358
++G P+VVTYT ++ A G + AI +M G P+ +N LI L + ++
Sbjct: 532 LSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKM 591
Query: 359 QEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFH 418
+A Y + EM G++P+ T+ +I + GH ++A + ++M E +P+ T
Sbjct: 592 DQA-YKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDRE-IQPDSCTHS 649
Query: 419 PLLKSCFKTGKT 430
LLK K K+
Sbjct: 650 ALLKHLNKDYKS 661
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 149/322 (46%), Gaps = 9/322 (2%)
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHG----WCKINRV 253
G +++ T ++LD L + G + A V ++ S N + + + K + +
Sbjct: 76 GFKRSELTYAVILDILARNGLMRSAYCVMEKVVSVKMENGVVDVLILDLLLWIYAKKSML 135
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYC-RQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
++ +M G P + + + +++ R + E+ + M G P VVTY T
Sbjct: 136 EKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTYNT 195
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN 372
++ K G +EA+++ +M+ +G P+ +N L+ L + +++A + Q EM
Sbjct: 196 MLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQ-EMLRL 254
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
G+ T++ +I + G ++A + EEM P + T++ ++ K G+ +
Sbjct: 255 GLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLS-RGAVPTLVTYNTIMYGLCKWGRVSD 313
Query: 433 CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLI 492
+LLD MVNK+ L D+ +Y +I+G R A+LLF E+ + P T +
Sbjct: 314 A-RKLLDVMVNKN-LMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTL 371
Query: 493 LDEVKQKHMYDAAEKIEAVMKK 514
+D + + D A +++ M K
Sbjct: 372 IDGLCRMGDLDVAMRLKDEMIK 393
>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
Length = 987
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 194/401 (48%), Gaps = 19/401 (4%)
Query: 95 AIQPSHYLVNKLIHRF--KDDWKSALGI---FRWAGSCPG-YEHSSEIYEMMVDILGKVR 148
+ PS + N +I + K ALGI G P + ++S IY + GK+
Sbjct: 314 GVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCG---GKLD 370
Query: 149 QMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNL 208
+ +++ L +++G T+ T ++ + A + +DA+R + + + + + +
Sbjct: 371 EAEEL--LNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGV 428
Query: 209 LLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG 267
L++ L K+ +++ A+ E+ + + PN T+ I G+CK+ V A + M+ G
Sbjct: 429 LINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEG 488
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
CHP +Y ++I + K L+ +MQ G P V+TYTT++ K +F+ A
Sbjct: 489 CHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAF 548
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITM 387
R+ E M+ G PD + +N L L ++ R +EA Y + V GV T+ +++
Sbjct: 549 RLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEA-YSFLV---RKGVVLTKVTYTSLVDG 604
Query: 388 FSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHL 447
FS G+ + A ++E+M E CK ++ T+ LL++ K K +E LS L D + +
Sbjct: 605 FSKAGNTDFAAVLIEKMVN-EGCKADLYTYSVLLQALCKQKKLNEALSIL--DQMTVSGV 661
Query: 448 SLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+I YT++I + + K + A LF EMI P T
Sbjct: 662 KCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATT 702
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/407 (24%), Positives = 164/407 (40%), Gaps = 96/407 (23%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDA 187
+ + S IY ++ D +++ + AL+ +M + I + T +++ ++++A
Sbjct: 493 AWTYGSLIYGLIQD-----KKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNA 547
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGW 247
R F+ + GL + + N+L D LCK G+ E A S FL K + T+ + G+
Sbjct: 548 FRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYS-FLVRKGVVLTKV-TYTSLVDGF 605
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
K D A I++M GC + +YS ++Q+ C+Q ++ +LD+M G N+
Sbjct: 606 SKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNI 665
Query: 308 V-----------------------------------TYTTVMSYLAKSGDFEEAIRITEK 332
V TYT +S K G EEA + +
Sbjct: 666 VAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGE 725
Query: 333 MKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
M+ G P D T+N I H G
Sbjct: 726 MERDGVTP------------------------------------DVVTYNIFINGCGHMG 749
Query: 393 HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD---------------ECLSQL 437
+ ++AF L+ M C+PN T+ LLK K + + QL
Sbjct: 750 YIDRAFSTLKRMVD-ASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQL 808
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
L+ M+ KH L+ + TY+ +I G C+A + E A +L M+G DI+P
Sbjct: 809 LERMM-KHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISP 854
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 155/356 (43%), Gaps = 12/356 (3%)
Query: 156 LLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK 215
L++E VT NT+ + + G A R F L G++ +T T N LL C+
Sbjct: 170 LVQEGLLPDTVTYNTM---IMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCR 226
Query: 216 EGKVELA--RSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI 273
+ A + + L C N +++ I I G C+ V EA + M GC +
Sbjct: 227 TSDLRKACWLLMMMPLMGC-RRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLH 285
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
+Y+ +I+ C++ LLDEM +G P+V TY ++ KSG ++A+ I M
Sbjct: 286 TYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALM 345
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
+ G PD +N LIY L ++ EA + + G P TF +I +
Sbjct: 346 EQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIAR-GFTPTVITFTNLINGYCKAER 403
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
+ A V M +CK ++Q + L+ K + E + L++M + L+ ++ T
Sbjct: 404 IDDALRVKSNMIS-SNCKLDLQAYGVLINVLIKKCRLKEA-KETLNEMF-ANGLAPNVVT 460
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT-CRLILDEVKQKHMYDAAEKI 508
YT +I G C+ A +FK M P T LI ++ K ++ A I
Sbjct: 461 YTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALI 516
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 121/298 (40%), Gaps = 43/298 (14%)
Query: 253 VDEAQWTIQEMKGHGCHPCVIS---YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
V EA IQ ++ G V+S Y+ ++S R + +L + +G P+ VT
Sbjct: 122 VREAVDAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVT 181
Query: 310 YTT-VMSYLAK----------------------------------SGDFEEAIRITEKMK 334
Y T +M+Y K + D +A + M
Sbjct: 182 YNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMP 241
Query: 335 IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHH 394
++G + + + LI L A V+EA+ V M +G + + T+ +I G
Sbjct: 242 LMGCRRNEYSYTILIQGLCEARCVREAL-VLVFMMVHDGCSLNLHTYTLLIKGLCKEGRI 300
Query: 395 EKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTY 454
A +L+EM L P+V T++ ++ K+G+ + L + ++ ++ + D TY
Sbjct: 301 HDARGLLDEM-PLRGVVPSVWTYNAMIDGYCKSGRMKDALG--IKALMEQNGCNPDDWTY 357
Query: 455 TLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
+I+GLC K + A L I TP T +++ + D A ++++ M
Sbjct: 358 NSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNM 414
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 98/242 (40%), Gaps = 43/242 (17%)
Query: 313 VMSYLAKSG---DFEEAIRITEKMKIVGSKP---DSRFFNCLIYTLGRASRVQEAVYVYQ 366
V+S ++ SG D EA+ + ++ VG K + +N + +L R + +Y
Sbjct: 109 VLSMISCSGTAEDVREAVDAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYS 168
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKA---FHVLEE-------------------- 403
+ + G+ PDT T+NTMI + G A F +L E
Sbjct: 169 -HLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRT 227
Query: 404 -----------MNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
M L C+ N ++ L++ + E L +L M+ SL++
Sbjct: 228 SDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREAL--VLVFMMVHDGCSLNLH 285
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
TYTL+I GLC+ + A L EM + P T ++D + A I+A+M
Sbjct: 286 TYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALM 345
Query: 513 KK 514
++
Sbjct: 346 EQ 347
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 188/377 (49%), Gaps = 19/377 (5%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVM---RRFSGAGQWEDAVR 189
+ +++D + +D AL++ M+ K IVT N++ K + RRF A ++ R
Sbjct: 195 HNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKA---KEVFR 251
Query: 190 TFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWC 248
D+ + + + N+L+ C+ G+VE A + E++ + P+ +F+ I +
Sbjct: 252 AMDQCS---VAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFS 308
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
++D A ++EMKG G P + Y+ +I +CR + S+ + DEM GC P+VV
Sbjct: 309 TRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVV 368
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
TY T+++ L K +A + +MK G PD F LI+ R ++A+ ++
Sbjct: 369 TYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTL 428
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
+ + + PD +N++I G KA + ++M+ E PN T+ L+ S + G
Sbjct: 429 LHQR-LRPDVVAYNSLIDGMCRKGDLAKANELWDDMHARE-IFPNHVTYSILIDSHCEKG 486
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ +E LD+MV+K +L +I TY +I G CR+ + ++M+ +I P T
Sbjct: 487 QVEEAFG-FLDEMVSKGNLP-NIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLIT 544
Query: 489 CR-LILDEVKQKHMYDA 504
LI +K+++M+ A
Sbjct: 545 FNTLIHGYIKEENMHGA 561
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 183/367 (49%), Gaps = 6/367 (1%)
Query: 144 LGKVRQMDQMRALLEEMSKGHIVT-LNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKN 202
L K R+ D+ + + M + + + + ++ F G+ E+A++ + E+ G+ +
Sbjct: 237 LCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPD 296
Query: 203 TETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQ 261
+ + L+ GK++ A + E+K + P+ + + I G+C+ + EA
Sbjct: 297 VVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRD 356
Query: 262 EMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSG 321
EM G GC P V++Y+T++ C+Q+ ELL+EM+ +G P++ T+TT++ + G
Sbjct: 357 EMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDG 416
Query: 322 DFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTF 381
+FE+A+++ + + +PD +N LI + R + +A ++ +M + P+ T+
Sbjct: 417 NFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWD-DMHAREIFPNHVTY 475
Query: 382 NTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDM 441
+ +I G E+AF L+EM + PN+ T++ ++K ++G + Q L M
Sbjct: 476 SILIDSHCEKGQVEEAFGFLDEMVSKGNL-PNIMTYNSIIKGYCRSGNVKKG-QQFLQKM 533
Query: 442 VNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHM 501
+ + L D+ T+ +IHG + A+ +F M + P T +I++ ++
Sbjct: 534 MQDNILP-DLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGN 592
Query: 502 YDAAEKI 508
+ A ++
Sbjct: 593 MEEAGRV 599
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 127/258 (49%), Gaps = 4/258 (1%)
Query: 227 LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQY 286
L L S NA+T NI +H +CK D+A I EM+ P V++++ +I + R
Sbjct: 147 LVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAG 206
Query: 287 NFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFN 346
+ L+D M +G P +VT+ +V+ L K F++A + M PD R FN
Sbjct: 207 DVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFN 266
Query: 347 CLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNK 406
LI R V+EA+ Y+ EM + GV PD +F+ +I +FS G + A L EM
Sbjct: 267 ILIGGFCRVGEVEEAMKFYK-EMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKG 325
Query: 407 LEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANK 466
L P+ + ++ + G E L ++ D+MV L D+ TY +++GLC+ ++
Sbjct: 326 L-GLVPDGVIYTMVIGGFCRAGSMSEAL-RVRDEMVGLGCLP-DVVTYNTLLNGLCKQHR 382
Query: 467 CEWAYLLFKEMIGHDITP 484
A L EM +TP
Sbjct: 383 LLDAEELLNEMKERGVTP 400
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 154/345 (44%), Gaps = 40/345 (11%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTI-AKVMRRFSGAGQWEDAVRTFDELG 195
+ ++ + +MD A L EM +V I V+ F AG +A+R DE+
Sbjct: 300 FSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMV 359
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVD 254
G + T N LL+ LCK+ ++ A + E+K + P+ TF IHG+C+ +
Sbjct: 360 GLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFE 419
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYEL-------------------- 294
+A + P V++Y+++I CR+ + +K EL
Sbjct: 420 KALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILI 479
Query: 295 ---------------LDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
LDEM ++G PN++TY +++ +SG+ ++ + +KM
Sbjct: 480 DSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNIL 539
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
PD FN LI+ + + A V+ + M + V PD T+N +I FS G+ E+A
Sbjct: 540 PDLITFNTLIHGYIKEENMHGAFNVFNI-MEKEMVQPDAVTYNMIINGFSEQGNMEEAGR 598
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK 444
V ++M +P+ T+ L+ G + E QL D+M+++
Sbjct: 599 VFKKMGA-SGIEPDRYTYMSLINGHVTAGNSKEAF-QLHDEMMHR 641
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 112/223 (50%), Gaps = 5/223 (2%)
Query: 156 LLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK 215
LL + + +V N++ M R G A +D++ + N T ++L+D+ C+
Sbjct: 428 LLHQRLRPDVVAYNSLIDGMCR---KGDLAKANELWDDMHAREIFPNHVTYSILIDSHCE 484
Query: 216 EGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVIS 274
+G+VE A E+ S PN T+N I G+C+ V + Q +Q+M P +I+
Sbjct: 485 KGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLIT 544
Query: 275 YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
++T+I Y ++ N + + + M+ + P+ VTY +++ ++ G+ EEA R+ +KM
Sbjct: 545 FNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMG 604
Query: 335 IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
G +PD + LI A +EA ++ EM G APD
Sbjct: 605 ASGIEPDRYTYMSLINGHVTAGNSKEAFQLHD-EMMHRGFAPD 646
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 81/165 (49%), Gaps = 3/165 (1%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE--LKSCIPPNAHT 239
GQ E+A DE+ + G N T N ++ C+ G V+ + FL+ ++ I P+ T
Sbjct: 486 GQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQ-FLQKMMQDNILPDLIT 544
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
FN IHG+ K + A M+ P ++Y+ II + Q N + + +M
Sbjct: 545 FNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMG 604
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRF 344
A G P+ TY ++++ +G+ +EA ++ ++M G PD +F
Sbjct: 605 ASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPDDKF 649
>gi|242069107|ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
gi|241935673|gb|EES08818.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
Length = 676
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 167/352 (47%), Gaps = 26/352 (7%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHT 239
G + A +E+ GL+ N T L+D LCK G E A +FL+L S PN HT
Sbjct: 265 GYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHT 324
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+ + I G+CK ++ A+ + M G P +Y+T+I +CR +F + +EL+++M+
Sbjct: 325 YTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMK 384
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
+G PN+ TY ++ K G ++A ++ G PD + LI + +
Sbjct: 385 LEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHIT 444
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
A+ ++ +M EN PD T+ T+I M+ E++ + ++ + P QT+
Sbjct: 445 YALDLFN-QMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLV-PTKQTYTS 502
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
++ + GK+ L ++ + MV +H D TY +I GLC+ ++ E A LF+ M+
Sbjct: 503 MIAGYCRVGKSTSAL-KVFERMV-QHGCLPDPITYGALISGLCKESRLEEARALFETMLD 560
Query: 480 HDITP--------RYQTCRL-----------ILDEVKQKHMYDA-AEKIEAV 511
+ P Y+ CR LD+ +Q H DA K+ AV
Sbjct: 561 KHMVPCDVTCVTLAYEYCRRDKTTIAVSFLDGLDKRQQAHAADALVRKLSAV 612
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 146/348 (41%), Gaps = 43/348 (12%)
Query: 183 QWEDAVRTFDELGTFGLEKNTETMNLLLDT-LCKEGKVELARSVFLELKSCIPPNAHTFN 241
+ +A EL + GL ET N +L L + AR F + + P+A +F
Sbjct: 128 RLREATDMLLELRSHGLPLVVETANWVLRVGLRQRHHFAHARQAFDGMG--VRPDARSFR 185
Query: 242 IFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ 301
+ G C+ R +EA + M G + + +++++CRQ F V L M
Sbjct: 186 ALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGLFGRMVEM 245
Query: 302 GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPD-----------------SRF 344
G PPNVV YT + L K G ++A + E+M G KP+ R
Sbjct: 246 GNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWTERA 305
Query: 345 FNCLIYTLGRASRVQEAVYVYQV-------------------EMPENGVAPDTSTFNTMI 385
F L L ++S + V+ Y V M E G+AP+T+T+ T+I
Sbjct: 306 FR-LFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLI 364
Query: 386 TMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKH 445
G ++AF ++ +M KLE PN+ T++ ++ K GK + L M
Sbjct: 365 DGHCRGGSFDRAFELMNKM-KLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVL--RMATSQ 421
Query: 446 HLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
L D TYT++I C+ +A LF +M + P T I+
Sbjct: 422 GLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTII 469
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 118/264 (44%), Gaps = 7/264 (2%)
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQ-YNFSKVYELLDEMQAQGCPPNVVT 309
NR+ EA + E++ HG V + + +++ RQ ++F+ + D M G P+ +
Sbjct: 127 NRLREATDMLLELRSHGLPLVVETANWVLRVGLRQRHHFAHARQAFDGM---GVRPDARS 183
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM 369
+ ++ + G FEEA + M G DS ++ R R ++ ++ M
Sbjct: 184 FRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGLFG-RM 242
Query: 370 PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
E G P+ + + G+ ++AFHVLEEM + KPNV T L+ K G
Sbjct: 243 VEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVG-KGLKPNVYTHTSLIDGLCKIGW 301
Query: 430 TDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTC 489
T+ +L +V ++ TYT++I G C+ K A +L M+ + P T
Sbjct: 302 TERAF-RLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTY 360
Query: 490 RLILDEVKQKHMYDAAEKIEAVMK 513
++D + +D A ++ MK
Sbjct: 361 TTLIDGHCRGGSFDRAFELMNKMK 384
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/222 (19%), Positives = 83/222 (37%), Gaps = 37/222 (16%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDA 187
G ++ Y ++D + D+ L+ +M +G + + T ++ F G+ + A
Sbjct: 352 GLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQA 411
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIP----------- 234
+ + GL + T +L+ CK+G + A +F ++ SC P
Sbjct: 412 YKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAM 471
Query: 235 -----------------------PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPC 271
P T+ I G+C++ + A + M HGC P
Sbjct: 472 YCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPD 531
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
I+Y +I C++ + L + M + P VT T+
Sbjct: 532 PITYGALISGLCKESRLEEARALFETMLDKHMVPCDVTCVTL 573
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 175/346 (50%), Gaps = 15/346 (4%)
Query: 145 GKVRQ-MDQMRALLEEMSKGHIVTLN-TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKN 202
G+V+ +D MR + E +G I T V+ + G+ ++AV+ FDE+ T G K
Sbjct: 159 GRVQAALDIMREMRE---RGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKP 215
Query: 203 TETM-NLLLDTLCKEGKVELA---RSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQW 258
M N L+ C +GK++ A R +E + T+N+ +H R EA
Sbjct: 216 EAVMYNALIGGYCDQGKLDTALLYRDRMVE--RGVAMTVATYNLLVHALFMDGRGTEAYE 273
Query: 259 TIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLA 318
++EM G G P V +Y+ +I +C++ N K E+ + M +G VVTYT ++ L+
Sbjct: 274 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALS 333
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDT 378
K G +E ++ ++ G +PD +N LI + + + A + EM + +APD
Sbjct: 334 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMG-EMEKKRIAPDD 392
Query: 379 STFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLL 438
T+NT++ G ++A +++EM + +P++ T++ L+ G + L ++
Sbjct: 393 VTYNTLMRGLCLLGRVDEARKLIDEMTE-RGIQPDLVTYNTLISGYSMKGDVKDAL-RIR 450
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
++M+NK + + TY +I GLC+ + + A + KEM+ + ITP
Sbjct: 451 NEMMNK-GFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITP 495
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 154/345 (44%), Gaps = 42/345 (12%)
Query: 202 NTETMNLLLDTLCKEGKVELARSVFLELK--SCIPPNAHTFNIFIHGWCKINRVDEAQWT 259
N T N ++ C G+V+ A + E++ I PN +T+ I GWCK+ RVDEA
Sbjct: 144 NAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKV 203
Query: 260 IQEMKGHG-CHPCVISYSTIIQSYCRQ------------------------YNF------ 288
EM G P + Y+ +I YC Q YN
Sbjct: 204 FDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALF 263
Query: 289 -----SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSR 343
++ YEL++EM +G P+V TY +++ K G+ ++A+ I E M G +
Sbjct: 264 MDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVV 323
Query: 344 FFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEE 403
+ LIY L + +VQE ++ E G+ PD +N +I S G+ ++AF ++ E
Sbjct: 324 TYTALIYALSKKGQVQETDKLFD-EAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE 382
Query: 404 MNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCR 463
M K + P+ T++ L++ G+ DE +L+D+M + + D+ TY +I G
Sbjct: 383 MEK-KRIAPDDVTYNTLMRGLCLLGRVDEA-RKLIDEMTERG-IQPDLVTYNTLISGYSM 439
Query: 464 ANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+ A + EM+ P T ++ + + D AE +
Sbjct: 440 KGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENM 484
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 145/309 (46%), Gaps = 6/309 (1%)
Query: 81 DEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWK--SALGIFRWAGSCPGYEHSSEIYE 138
DE + + ++P + N LI + D K +AL ++R G + Y
Sbjct: 198 DEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTAL-LYRDRMVERGVAMTVATYN 256
Query: 139 MMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTF 197
++V L + + L+EEM KG + T ++ G + A+ F+ +
Sbjct: 257 LLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRR 316
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEA 256
G+ T L+ L K+G+V+ +F E ++ I P+ +N I+ +D A
Sbjct: 317 GVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRA 376
Query: 257 QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSY 316
+ EM+ P ++Y+T+++ C + +L+DEM +G P++VTY T++S
Sbjct: 377 FEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISG 436
Query: 317 LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
+ GD ++A+RI +M G P +N LI L + + +A + + EM ENG+ P
Sbjct: 437 YSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVK-EMVENGITP 495
Query: 377 DTSTFNTMI 385
D ST+ ++I
Sbjct: 496 DDSTYISLI 504
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 114/248 (45%), Gaps = 10/248 (4%)
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRIT 330
C +++ +++ C ++ ELL +M PN VTY TV++ G + A+ I
Sbjct: 113 CTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIM 168
Query: 331 EKMKIVGS-KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFS 389
+M+ G P+ + +I + RV EAV V+ + + V P+ +N +I +
Sbjct: 169 REMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYC 228
Query: 390 HHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSL 449
G + A + M + V T++ L+ + F G+ E +L+++M K L+
Sbjct: 229 DQGKLDTALLYRDRMVE-RGVAMTVATYNLLVHALFMDGRGTEAY-ELVEEMGGKG-LAP 285
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI- 508
D+ TY ++I+G C+ + A +F+ M + T ++ + +K +K+
Sbjct: 286 DVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLF 345
Query: 509 -EAVMKKL 515
EAV + +
Sbjct: 346 DEAVRRGI 353
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 104/227 (45%), Gaps = 7/227 (3%)
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
+ + L +M P T+ ++ +L +G A+ + +M +P++ +N +
Sbjct: 96 APAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTV 151
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
I RVQ A+ + + G+AP+ T+ T+I+ + G ++A V +EM
Sbjct: 152 IAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKG 211
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
KP ++ L+ GK D L L D + + +++ + TY L++H L +
Sbjct: 212 EVKPEAVMYNALIGGYCDQGKLDTAL--LYRDRMVERGVAMTVATYNLLVHALFMDGRGT 269
Query: 469 WAYLLFKEMIGHDITPRYQTCRLILD-EVKQKHMYDAAEKIEAVMKK 514
AY L +EM G + P T ++++ K+ ++ A E E + ++
Sbjct: 270 EAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRR 316
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 99/227 (43%), Gaps = 5/227 (2%)
Query: 95 AIQPSHYLVNKLI--HRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQ 152
+ P + N LI H + + K AL IF S G + Y ++ L K Q+ +
Sbjct: 282 GLAPDVFTYNILINGHCKEGNVKKALEIFENM-SRRGVRATVVTYTALIYALSKKGQVQE 340
Query: 153 MRALLEE-MSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLD 211
L +E + +G L ++ S +G + A E+ + + T N L+
Sbjct: 341 TDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMR 400
Query: 212 TLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHP 270
LC G+V+ AR + E+ + I P+ T+N I G+ V +A EM G +P
Sbjct: 401 GLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNP 460
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
+++Y+ +IQ C+ ++ EM G P+ TY +++ L
Sbjct: 461 TLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 507
>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63070, mitochondrial; Flags: Precursor
gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 171/360 (47%), Gaps = 5/360 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
+ ++ + K+ + D + +L E+M I L T + + F Q A+ ++
Sbjct: 78 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMM 137
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
G + T+N LL+ C ++ A ++ ++ + P+ TF +HG + N+
Sbjct: 138 KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS 197
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA ++ M GC P +++Y +I C++ LL++M+ +VV Y T++
Sbjct: 198 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTII 257
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
L K ++A + KM+ G KPD +N LI L R +A + +M E +
Sbjct: 258 DGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLS-DMLEKNI 316
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
PD FN +I F G +A + +EM K +HC P+V ++ L+K K + +E +
Sbjct: 317 NPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGM 376
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
+ +++ L + TYT +IHG +A C+ A ++FK+M+ + P T ++LD
Sbjct: 377 EVFRE--MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLD 434
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/423 (23%), Positives = 181/423 (42%), Gaps = 40/423 (9%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
G H+ Y + ++ + Q+ A+L +M K G+ ++ T+ ++ F + +A
Sbjct: 105 GISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 164
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIH 245
V D++ G + +T T L+ L + K A ++ + +K C P+ T+ I+
Sbjct: 165 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGC-QPDLVTYGAVIN 223
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G CK D A + +M+ V+ Y+TII C+ + ++L ++M+ +G P
Sbjct: 224 GLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKP 283
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
+V TY ++S L G + +A R+ M PD FFN LI + ++ EA +Y
Sbjct: 284 DVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLY 343
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKL------------------ 407
+ PD +NT+I F + E+ V EM++
Sbjct: 344 DEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQ 403
Query: 408 ----------------EHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDI 451
+ P++ T++ LL G + L ++ + + K + LDI
Sbjct: 404 ARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETAL--VVFEYMQKRDMKLDI 461
Query: 452 TTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAV 511
TYT +I LC+A K E + LF + + P T ++ +K + + A+ +
Sbjct: 462 VTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVE 521
Query: 512 MKK 514
MK+
Sbjct: 522 MKE 524
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 136/312 (43%), Gaps = 49/312 (15%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
IY ++D L K + MD L +M +KG + T ++ G+W DA R ++
Sbjct: 252 IYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDM 311
Query: 195 GTFGLEKNTET----MNLLLDTLCKEGKVELARSVFLEL---KSCIPPNAHTFNIFIHGW 247
LEKN N L+D KEGK+ A ++ E+ K C P + +N I G+
Sbjct: 312 ----LEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP-DVVAYNTLIKGF 366
Query: 248 CKINRVDE-----------------------------------AQWTIQEMKGHGCHPCV 272
CK RV+E AQ ++M G HP +
Sbjct: 367 CKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDI 426
Query: 273 ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEK 332
++Y+ ++ C N + + MQ + ++VTYTT++ L K+G E+ +
Sbjct: 427 MTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCS 486
Query: 333 MKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
+ + G KP+ + ++ R +EA ++ VEM E+G P++ T+NT+I G
Sbjct: 487 LSLKGVKPNVVTYTTMMSGFCRKGLKEEADALF-VEMKEDGPLPNSGTYNTLIRARLRDG 545
Query: 393 HHEKAFHVLEEM 404
+ +++EM
Sbjct: 546 DEAASAELIKEM 557
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 126/270 (46%), Gaps = 13/270 (4%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEMSKGH-----IVTLNTIAKVMRRFSGAGQWEDAVRT 190
+ ++D K ++ + L +EM K +V NT+ K ++ + E+ +
Sbjct: 322 FFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYK---RVEEGMEV 378
Query: 191 FDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCK 249
F E+ GL NT T L+ + + A+ VF ++ S + P+ T+NI + G C
Sbjct: 379 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCN 438
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
V+ A + M+ +++Y+T+I++ C+ ++L + +G PNVVT
Sbjct: 439 NGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVT 498
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV-E 368
YTT+MS + G EEA + +MK G P+S +N LI R EA + E
Sbjct: 499 YTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRA--RLRDGDEAASAELIKE 556
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
M G A D STF + M H G +K+F
Sbjct: 557 MRSCGFAGDASTFGLVTNML-HDGRLDKSF 585
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 134/301 (44%), Gaps = 11/301 (3%)
Query: 218 KVELARSVFLELKSCIP-PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYS 276
K++ A +F ++ P P+ F+ + K+N+ D ++M+ G + +YS
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 277 TIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIV 336
I +CR+ S +L +M G P++VT ++++ EA+ + ++M +
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 337 GSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEK 396
G +PD+ F L++ L + ++ EAV + + M G PD T+ +I G +
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVE-RMVVKGCQPDLVTYGAVINGLCKRGEPDL 233
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHH---LSLDITT 453
A ++L +M K + +V ++ ++ K D+ D+ NK + D+ T
Sbjct: 234 ALNLLNKMEK-GKIEADVVIYNTIIDGLCKYKHMDDAF-----DLFNKMETKGIKPDVFT 287
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
Y +I LC + A L +M+ +I P ++D ++ AEK+ M
Sbjct: 288 YNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMV 347
Query: 514 K 514
K
Sbjct: 348 K 348
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 180/369 (48%), Gaps = 8/369 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
G H+ Y +M++ L + Q+ A+L +M K G+ ++ T+ ++ F + +A
Sbjct: 95 GVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 154
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIH 245
V D++ G + +T T L+ L + K A ++ + +K C P+ T+ I+
Sbjct: 155 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGC-QPDLVTYGAVIN 213
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G CK D A + +M+ V+ YST+I S C+ + L EM +G P
Sbjct: 214 GLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRP 273
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
+V TY++++S L G + +A R+ M P+ FN LI + ++ EA ++
Sbjct: 274 DVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLF 333
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
EM + + P+ T+N++I F H ++A + M + C P+V T++ L+
Sbjct: 334 D-EMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVS-KDCLPDVVTYNTLINGFC 391
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
K K + + +L DM ++ L + TYT +IHG +A+ C+ A ++FK+M+ + P
Sbjct: 392 KAKKVVDGM-ELFRDM-SRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPN 449
Query: 486 YQTCRLILD 494
T +LD
Sbjct: 450 IMTYNTLLD 458
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 190/369 (51%), Gaps = 20/369 (5%)
Query: 141 VDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDE-LGTFGL 199
VD+ G++ + +++E SK L+ IAK M++F D V +F E + G+
Sbjct: 50 VDLFGEMVKSRPFPSIVE-FSK----LLSAIAK-MKKF-------DLVISFGEKMEILGV 96
Query: 200 EKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQW 258
N T N++++ LC+ ++ A ++ ++ K P+ T N ++G+C NR+ EA
Sbjct: 97 SHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVA 156
Query: 259 TIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLA 318
+ +M G P ++++T++ + S+ L++ M +GC P++VTY V++ L
Sbjct: 157 LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLC 216
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDT 378
K G+ + A+ + KM+ + D ++ +I +L + V +A+ ++ EM G+ PD
Sbjct: 217 KRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLF-TEMDNKGIRPDV 275
Query: 379 STFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLL 438
T++++I+ ++G A +L +M + PNV TF+ L+ + K GK E +L
Sbjct: 276 FTYSSLISCLCNYGRWSDASRLLSDMLE-RKINPNVVTFNSLIDAFAKEGKLIEA-EKLF 333
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-K 497
D+M+ + + +I TY +I+G C ++ + A +F M+ D P T +++ K
Sbjct: 334 DEMIQR-SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCK 392
Query: 498 QKHMYDAAE 506
K + D E
Sbjct: 393 AKKVVDGME 401
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 167/359 (46%), Gaps = 41/359 (11%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
IY ++D L K R +D L EM +KG + T + ++ G+W DA R ++
Sbjct: 242 IYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 301
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRV 253
+ N T N L+D KEGK+ A +F E+ + I PN T+N I+G+C +R+
Sbjct: 302 LERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL 361
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM--------------- 298
DEAQ M C P V++Y+T+I +C+ EL +M
Sbjct: 362 DEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTL 421
Query: 299 -----QAQGCP---------------PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
QA C PN++TY T++ L K+G E+A+ + E ++
Sbjct: 422 IHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKM 481
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
+PD +N + + +A +V++ ++ + GV PD +NTMI+ F G E+A+
Sbjct: 482 EPDIYTYNIMSEGMCKAGKVEDGWDLF-CSLSLKGVKPDVIAYNTMISGFCKKGLKEEAY 540
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLV 457
+ +M K + P+ T++ L+++ + G D+ S L + + D +TY LV
Sbjct: 541 TLFIKM-KEDGPLPDSGTYNTLIRAHLRDG--DKAASAELIKEMRSCRFAGDASTYGLV 596
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 174/358 (48%), Gaps = 6/358 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDA 187
GY+ + + +V L + + + AL+E M KG L T V+ G+ + A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHG 246
+ +++ +E + + ++D+LCK V+ A ++F E+ + I P+ T++ I
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C R +A + +M +P V++++++I ++ ++ + +L DEM + PN
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
+VTY ++++ +EA +I M PD +N LI +A +V + + +++
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFR 404
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
+M G+ +T T+ T+I F + A V ++M + PN+ T++ LL K
Sbjct: 405 -DMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVS-DGVHPNIMTYNTLLDGLCK 462
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
GK ++ + ++ + + K + DI TY ++ G+C+A K E + LF + + P
Sbjct: 463 NGKLEKAM--VVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKP 518
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 143/308 (46%), Gaps = 15/308 (4%)
Query: 38 SSPIESYCSDGARLDHHQVLC--VDSPRLPDIDVIISKVHVGSSEDEVFQSLK--QDHVC 93
SS I C+ G D ++L ++ P++ S + + E ++ ++ K + +
Sbjct: 279 SSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ 338
Query: 94 NAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMD 151
+I P+ N LI+ F D A IF S Y +++ K +++
Sbjct: 339 RSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVT-YNTLINGFCKAKKVV 397
Query: 152 QMRALLEEMSK----GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN 207
L +MS+ G+ VT T+ + F A ++A F ++ + G+ N T N
Sbjct: 398 DGMELFRDMSRRGLVGNTVTYTTL---IHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYN 454
Query: 208 LLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
LLD LCK GK+E A VF L KS + P+ +T+NI G CK +V++ +
Sbjct: 455 TLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLK 514
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
G P VI+Y+T+I +C++ + Y L +M+ G P+ TY T++ + GD +
Sbjct: 515 GVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAAS 574
Query: 327 IRITEKMK 334
+ ++M+
Sbjct: 575 AELIKEMR 582
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 135/292 (46%), Gaps = 5/292 (1%)
Query: 218 KVELARSVFLELKSCIP-PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYS 276
K++ A +F E+ P P+ F+ + K+ + D ++M+ G + +Y+
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 277 TIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIV 336
+I CR+ S +L +M G P++VT ++++ EA+ + ++M +
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 337 GSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEK 396
G +PD+ F L++ L + ++ EAV + + M G PD T+ +I G +
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVE-RMVVKGCQPDLVTYGAVINGLCKRGEPDL 223
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTL 456
A ++L +M K + +V + ++ S K D+ L+ L +M NK + D+ TY+
Sbjct: 224 ALNLLNKMEK-GKIEADVVIYSTVIDSLCKYRHVDDALN-LFTEMDNKG-IRPDVFTYSS 280
Query: 457 VIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+I LC + A L +M+ I P T ++D ++ AEK+
Sbjct: 281 LISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKL 332
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 6/156 (3%)
Query: 164 HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELAR 223
+I+T NT+ + G+ E A+ F+ L +E + T N++ + +CK GKVE
Sbjct: 449 NIMTYNTL---LDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGW 505
Query: 224 SVF--LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQS 281
+F L LK + P+ +N I G+CK +EA +MK G P +Y+T+I++
Sbjct: 506 DLFCSLSLKG-VKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRA 564
Query: 282 YCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
+ R + + EL+ EM++ + TY V L
Sbjct: 565 HLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 600
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 93/222 (41%), Gaps = 39/222 (17%)
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
+L EM P++V ++ ++S +AK F+ I EKM+I+G + +N +I L
Sbjct: 51 DLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCL 110
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
R S++ A+ + +M + G P T N+++ F H +A ++++M ++
Sbjct: 111 CRRSQLSFALAILG-KMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM----- 164
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
+ P D T+T ++HGL + NK A
Sbjct: 165 ---GYQP------------------------------DTVTFTTLVHGLFQHNKASEAVA 191
Query: 473 LFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
L + M+ P T +++ + ++ D A + M+K
Sbjct: 192 LVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEK 233
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 99/322 (30%), Positives = 157/322 (48%), Gaps = 9/322 (2%)
Query: 165 IVTLNTIAKVMRRFSGAGQWEDAVRTFD-ELGTFGLEKNTETMNLLLDTLCKEGKVELAR 223
I+ N + + R Q+ DAV + ++ GL NT T+N+L++ C V+L
Sbjct: 90 IIQFNKLLSAIVRMR---QYYDAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGF 146
Query: 224 SVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSY 282
SV + +K + P TF I+G CK +A +M GC P V +Y+TII
Sbjct: 147 SVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGL 206
Query: 283 CRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDS 342
C+ + L+ +M GC P+VVTY+T++ L K EA+ I MK G P
Sbjct: 207 CKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTV 266
Query: 343 RFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLE 402
+ LI L SR +EA + EM + PD TF+ +I +F G+ +A VL+
Sbjct: 267 VSYTSLIQGLCSFSRWKEASAMLN-EMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLK 325
Query: 403 EMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC 462
M ++ +PNV T++ L+ + E +L D M+ + D+ +Y+++I+G C
Sbjct: 326 TMTEM-GVEPNVITYNSLMHGYSLQMEVVEA-RKLFDVMITR-GCKPDVFSYSILINGYC 382
Query: 463 RANKCEWAYLLFKEMIGHDITP 484
+ + A LF EMI +TP
Sbjct: 383 MVKRIDEAKQLFNEMIHQGLTP 404
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/419 (24%), Positives = 175/419 (41%), Gaps = 46/419 (10%)
Query: 65 PDIDVIISKVHVGSSEDEVFQSLK--QDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGI 120
P I + ++ E Q+L+ D V QP Y +I+ + +A G+
Sbjct: 159 PTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGL 218
Query: 121 FRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFS 179
+ G G + Y ++D L K R +++ + M +KG T+ + +++
Sbjct: 219 IKKMGEV-GCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLC 277
Query: 180 GAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAH 238
+W++A +E+ + + + T +LL+D CKEG V A+ V + + PN
Sbjct: 278 SFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVI 337
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
T+N +HG+ V EA+ M GC P V SYS +I YC + +L +EM
Sbjct: 338 TYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEM 397
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRV 358
QG PN V+YTT++ + G EA + + M
Sbjct: 398 IHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMH------------------------ 433
Query: 359 QEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFH 418
NG PD T++ ++ F G+ KAF + M + KPN+ +
Sbjct: 434 ------------TNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQG-TYLKPNLVMYT 480
Query: 419 PLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
L+ S K+G + + V H L D+ YT +I+GLC+ + A F++M
Sbjct: 481 ILIDSMCKSGNLNHARKLFSELFV--HGLQPDVQIYTTIINGLCKEGLLDEALEAFRKM 537
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 181/387 (46%), Gaps = 8/387 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G + + + +++ L K + Q L ++M ++G + T ++ G+ A
Sbjct: 156 GLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAA 215
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHG 246
++G G + + T + L+D+LCK+ V A +F +K+ I P ++ I G
Sbjct: 216 AGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQG 275
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C +R EA + EM P ++++S +I +C++ N + +L M G PN
Sbjct: 276 LCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPN 335
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
V+TY ++M + + EA ++ + M G KPD ++ LI R+ EA ++
Sbjct: 336 VITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFN 395
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
EM G+ P+T ++ T+I F G +A + ++M+ + P++ T+ LL+ K
Sbjct: 396 -EMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYL-PDLCTYSVLLEGFCK 453
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
G + L + +L ++ YT++I +C++ A LF E+ H + P
Sbjct: 454 QGYLGKAFR--LFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDV 511
Query: 487 QTCRLILDEVKQKHMYDAAEKIEAVMK 513
Q I++ + ++ + D E +EA K
Sbjct: 512 QIYTTIINGLCKEGLLD--EALEAFRK 536
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 146/273 (53%), Gaps = 9/273 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK----GHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
+ +++DI K + + + +L+ M++ +++T N++ M +S + +A + FD
Sbjct: 304 FSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSL---MHGYSLQMEVVEARKLFD 360
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKIN 251
+ T G + + + ++L++ C +++ A+ +F E+ + PN ++ IH +C++
Sbjct: 361 VMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLG 420
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
++ EA+ ++M +G P + +YS +++ +C+Q K + L MQ PN+V YT
Sbjct: 421 KLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYT 480
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
++ + KSG+ A ++ ++ + G +PD + + +I L + + EA+ ++ +M E
Sbjct: 481 ILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFR-KMEE 539
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
+G P+ ++N +I F H +A ++ EM
Sbjct: 540 DGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEM 572
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 101/208 (48%), Gaps = 4/208 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIA--KVMRRFSGAGQWEDAVRTFDEL 194
Y ++++ V+++D+ + L EM + T NT++ ++ F G+ +A F ++
Sbjct: 374 YSILINGYCMVKRIDEAKQLFNEMIHQGL-TPNTVSYTTLIHAFCQLGKLREARELFKDM 432
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRV 253
T G + T ++LL+ CK+G + A +F ++ + PN + I I CK +
Sbjct: 433 HTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNL 492
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
+ A+ E+ HG P V Y+TII C++ + E +M+ GCPPN +Y +
Sbjct: 493 NHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVI 552
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPD 341
+ + D A+++ +M+ G D
Sbjct: 553 IRGFLQHKDESRAVQLIGEMRDKGFVAD 580
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 83/169 (49%), Gaps = 3/169 (1%)
Query: 345 FNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
FN L+ + R + +AV +M G++P+T T N +I F H + F VL ++
Sbjct: 93 FNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKV 152
Query: 405 NKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRA 464
KL +P + TF L+ K G+ + L +L DDMV + D+ TYT +I+GLC+
Sbjct: 153 IKL-GLQPTIITFTTLINGLCKAGEFAQAL-ELFDDMVAR-GCQPDVYTYTTIINGLCKM 209
Query: 465 NKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
+ A L K+M P T ++D + + + + A I + MK
Sbjct: 210 GETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMK 258
>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
Length = 814
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 175/406 (43%), Gaps = 41/406 (10%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLN-TIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +V L K R MD+ A L +M ++ N T ++ +S GQW++AVR F E+
Sbjct: 257 YSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMR 316
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVF----------------------------- 226
+ + T+++L+ +LCK GK++ AR VF
Sbjct: 317 RHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLV 376
Query: 227 -------LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
L L I P+ +TFN+ I + +D+A EM+ HG P V++Y T+I
Sbjct: 377 DMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVI 436
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
+ CR E ++M QG P+ Y ++ G +A + ++ G
Sbjct: 437 AALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMH 496
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
D FF+ +I L + RV +A ++ + + G+ P ++ ++ + G EKA
Sbjct: 497 LDIVFFSSIINNLCKLGRVMDAQNIFDLTV-NVGLHPTAVVYSMLMDGYCLVGKMEKALR 555
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIH 459
V + M +PN + L+ K G+ DE LS L +M+ K + Y ++I
Sbjct: 556 VFDAMVS-AGIEPNDVVYGTLVNGYCKIGRIDEGLS-LFREMLQK-GIKPSTILYNIIID 612
Query: 460 GLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
GL A + A + F EM I T ++L + + +D A
Sbjct: 613 GLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEA 658
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 172/357 (48%), Gaps = 17/357 (4%)
Query: 167 TLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF 226
T +T A +M + A + E A+ F +L GL N N LL C+ + + A +
Sbjct: 110 TSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDIL 169
Query: 227 L----ELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG--CHPCVISYSTIIQ 280
L EL C+P + +++I + C + +A ++ M G C P V++YST+I
Sbjct: 170 LHRTPEL-GCVP-DVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVID 227
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
+ ++ + +K +L EM +G PP+ VTY++V+ L K+ ++A +M G P
Sbjct: 228 GFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLP 287
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
++ +N LIY + +EAV V++ EM + + PD T + ++ +G ++A V
Sbjct: 288 NNWTYNNLIYGYSSTGQWKEAVRVFK-EMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 346
Query: 401 LEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLD--DMVNKHHLSLDITTYTLVI 458
+ M ++ PNV ++ +L G CL + D D++ ++ DI T+ ++I
Sbjct: 347 FDTM-AMKGQNPNVFSYTIMLNGYATKG----CLVDMTDLFDLMLGDGIAPDIYTFNVLI 401
Query: 459 HGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEAVMKK 514
+ A ++F EM H + P T R ++ + + M DA EK ++ +
Sbjct: 402 KAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQ 458
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 127/266 (47%), Gaps = 3/266 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTI-AKVMRRFSGAGQWEDA 187
G ++ +Y M++D V +M++ + + M I + + ++ + G+ ++
Sbjct: 529 GLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEG 588
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHG 246
+ F E+ G++ +T N+++D L + G+ A+ F E+ +S I N T+NI + G
Sbjct: 589 LSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRG 648
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
K DEA + +E++ +I+ +T+I + + +L + G P
Sbjct: 649 LFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPC 708
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
VVTY+ +++ L K G EEA + M+ G +PDSR N ++ L + + + A Y
Sbjct: 709 VVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRA-GAYL 767
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHG 392
++ E + + T ++ +FS G
Sbjct: 768 SKIDERNFSLEHLTTMLLVDLFSSKG 793
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 6/190 (3%)
Query: 299 QAQG---CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
+AQG P TY +M ++ E A+ ++ G + + N L+ A
Sbjct: 100 RAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEA 159
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH-CKPNV 414
R EA+ + PE G PD +++ ++ G +A +L M + C P+V
Sbjct: 160 KRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDV 219
Query: 415 QTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLF 474
+ ++ FK G ++ L +MV + + D TY+ V+H LC+A + A
Sbjct: 220 VAYSTVIDGFFKEGDVNKA-CDLFKEMVQR-GIPPDFVTYSSVVHALCKARAMDKAEAFL 277
Query: 475 KEMIGHDITP 484
++M+ + P
Sbjct: 278 RQMVNKGVLP 287
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 86/184 (46%), Gaps = 7/184 (3%)
Query: 92 VCNAIQPSHYLVNKLIHRFKDDWK--SALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQ 149
V I+P+ + L++ + + L +FR G + S+ +Y +++D L + +
Sbjct: 561 VSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQ-KGIKPSTILYNIIIDGLFEAGR 619
Query: 150 MDQMRALLEEMSKGHIVTLN--TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN 207
+ EM++ I +N T V+R +++A+ F EL ++ N T+N
Sbjct: 620 TVPAKVKFHEMTESGI-AMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLN 678
Query: 208 LLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
++ + + +VE A+ +F + +S + P T++I I K V+EA+ M+
Sbjct: 679 TMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNA 738
Query: 267 GCHP 270
GC P
Sbjct: 739 GCEP 742
>gi|413936133|gb|AFW70684.1| hypothetical protein ZEAMMB73_229858 [Zea mays]
Length = 375
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 149/326 (45%), Gaps = 39/326 (11%)
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVDE 255
G E N T N+++D +C+EG V+ AR + L +SC PN +N + G+C I R +
Sbjct: 5 GCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRSC-KPNTVNYNTVLKGFCSIERWVD 63
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
A + E+ C P + + I + CR+ KV L++M GC NVVTY ++
Sbjct: 64 ANEILDEVVSENCPPNEATLNVTINTLCRKGLLQKVTRYLEKMSKHGCTTNVVTYNAIIG 123
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
L + G+ + A+ + M+ G KPD +N ++ L A R ++A + ++M +N
Sbjct: 124 GLCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEEL-MIKMSQNDRL 182
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS 435
D STFNT+I+ + G +A V ++M + + C PN T+ ++ K K ++ L
Sbjct: 183 RDNSTFNTIISFWCQKGLILQALEVFKQMPE-KGCNPNSTTYSTIIGGLVKASKMEQAL- 240
Query: 436 QLLDDMVNK---------------------------------HHLSLDITTYTLVIHGLC 462
+LL++M NK +S Y V+ GLC
Sbjct: 241 ELLNEMANKGFNTDKMYLVLTKSLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLC 300
Query: 463 RANKCEWAYLLFKEMIGHDITPRYQT 488
R K +A + +M+ P T
Sbjct: 301 RNGKTNYAIDVLADMVSCGCMPDEST 326
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 144/350 (41%), Gaps = 78/350 (22%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQW 184
G E ++ Y +++D + + +DQ R LL + K + V NT V++ F +W
Sbjct: 5 GCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRSCKPNTVNYNT---VLKGFCSIERW 61
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVE-LARSVFLELKSCIPPNAHTFNIF 243
DA DE+ + N T+N+ ++TLC++G ++ + R + K N T+N
Sbjct: 62 VDANEILDEVVSENCPPNEATLNVTINTLCRKGLLQKVTRYLEKMSKHGCTTNVVTYNAI 121
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL-------- 295
I G C+ VD A + M+ GC P +++Y+T+++ C + EL+
Sbjct: 122 IGGLCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDR 181
Query: 296 ---------------------------DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
+M +GC PN TY+T++ L K+ E+A+
Sbjct: 182 LRDNSTFNTIISFWCQKGLILQALEVFKQMPEKGCNPNSTTYSTIIGGLVKASKMEQALE 241
Query: 329 I----------TEKMKIV------------------------GSKPDSRFFNCLIYTLGR 354
+ T+KM +V G P + +N ++ L R
Sbjct: 242 LLNEMANKGFNTDKMYLVLTKSLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCR 301
Query: 355 ASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
+ A+ V +M G PD ST+ +I + G+ ++A +L +
Sbjct: 302 NGKTNYAIDVL-ADMVSCGCMPDESTYIILIEGLFYEGYLKEARELLSRL 350
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 114/253 (45%), Gaps = 5/253 (1%)
Query: 263 MKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGD 322
M+ GC P ++Y+ II + CR+ + + ELL+ + ++ C PN V Y TV+
Sbjct: 1 MRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRSCKPNTVNYNTVLKGFCSIER 60
Query: 323 FEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFN 382
+ +A I +++ P+ N I TL R +Q+ V Y +M ++G + T+N
Sbjct: 61 WVDANEILDEVVSENCPPNEATLNVTINTLCRKGLLQK-VTRYLEKMSKHGCTTNVVTYN 119
Query: 383 TMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMV 442
+I G+ + A +L M CKP++ T++ +LK + ++ +L+ M
Sbjct: 120 AIIGGLCEQGNVDSALELLSNMQSF-GCKPDIVTYNTVLKGLCSADRWEDA-EELMIKMS 177
Query: 443 NKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE-VKQKHM 501
L D +T+ +I C+ A +FK+M P T I+ VK M
Sbjct: 178 QNDRLR-DNSTFNTIISFWCQKGLILQALEVFKQMPEKGCNPNSTTYSTIIGGLVKASKM 236
Query: 502 YDAAEKIEAVMKK 514
A E + + K
Sbjct: 237 EQALELLNEMANK 249
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 69/163 (42%), Gaps = 6/163 (3%)
Query: 117 ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMR 176
AL +F+ G +S Y ++ L K +M+Q LL EM+ T + +
Sbjct: 204 ALEVFKQMPE-KGCNPNSTTYSTIIGGLVKASKMEQALELLNEMANKGFNTDKMYLVLTK 262
Query: 177 RFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPP 235
+ + E+ V+ +L G+ T N +L LC+ GK A V ++ SC P
Sbjct: 263 SLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTNYAIDVLADMVSCGCMP 322
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTI 278
+ T+ I I G + EA +E+ C V+S S I
Sbjct: 323 DESTYIILIEGLFYEGYLKEA----RELLSRLCSRDVLSNSLI 361
>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
Length = 796
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 169/345 (48%), Gaps = 15/345 (4%)
Query: 148 RQMDQMRALLEEMSK----GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEK-- 201
R + M LL MS+ ++V+ NT+ ++ F + E+A+ + +
Sbjct: 145 RVGEAMGVLLRRMSELGCTPNVVSYNTL---LKGFCDENRAEEALELLHMMADGQVRSCP 201
Query: 202 -NTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWT 259
N + N +++ EG+V+ A ++FL++ IPPN T+ I I G CK VD A+
Sbjct: 202 PNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGV 261
Query: 260 IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK 319
Q+M G P +++Y+ +I Y + +V +L EM A G P+ TY ++ YL K
Sbjct: 262 FQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCK 321
Query: 320 SGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTS 379
G EA ++ + M G KPD + +++ + E ++ + M NG++P+
Sbjct: 322 KGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSE-MHSFLDLMVGNGISPNHY 380
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLD 439
FN + F+ +A + +M + + PNV + L+ + K G+ D+ + +
Sbjct: 381 IFNIVFCAFAKKAMIGEAMDIFNKMRQ-QGLSPNVVNYATLIDALCKLGRVDDAELK-FN 438
Query: 440 DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
M+N+ ++ +I +T +++GLC +K E A LF EM+ I P
Sbjct: 439 QMINE-GVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHP 482
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 114/486 (23%), Positives = 215/486 (44%), Gaps = 54/486 (11%)
Query: 71 ISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKD--DWKSALGIFRWAGSCP 128
+ K V + VFQ + + ++P+ LIH + WK + + + S
Sbjct: 249 LCKAQVVDRAEGVFQQM----IDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEM-SAH 303
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM--------------------SKGHIVTL 168
G E Y +++D L K + + R L + M +KG + +
Sbjct: 304 GLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEM 363
Query: 169 NTIAKVMR----------------RFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDT 212
++ +M F+ +A+ F+++ GL N L+D
Sbjct: 364 HSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDA 423
Query: 213 LCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPC 271
LCK G+V+ A F ++ + PN F ++G C I++ ++A EM G HP
Sbjct: 424 LCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPN 483
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
V+ ++TI+ + C + K L+D M+ G P++++Y ++ G +EA ++ +
Sbjct: 484 VVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLD 543
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHH 391
M VG KP+ +N L++ R R+ +A V+Q EM NG+ P T+NT++ H
Sbjct: 544 IMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQ-EMLSNGITPVVVTYNTIL----HG 598
Query: 392 GHHEKAFHVLEE--MNKLEHCKP-NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
+ F +E +N + K ++ T++ +L K DE L ++ + +K L
Sbjct: 599 LFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEAL-KMFQSLCSK-DLQ 656
Query: 449 LDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+DI T+ ++I L + + E A LF + + + P T RLI + + ++ + + +
Sbjct: 657 VDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGM 716
Query: 509 EAVMKK 514
+ M+K
Sbjct: 717 FSEMEK 722
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/414 (23%), Positives = 177/414 (42%), Gaps = 50/414 (12%)
Query: 92 VCNAIQPSHYLVNKLIHRF--KDDWKSALGIF---RWAGSCPGYEHSSEIYEMMVDILGK 146
V N I P+HY+ N + F K A+ IF R G P + Y ++D L K
Sbjct: 371 VGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVN----YATLIDALCK 426
Query: 147 VRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTET 205
+ ++D +M ++G + ++ +WE A F E+ G+ N
Sbjct: 427 LGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVF 486
Query: 206 MNLLLDTLCKEGKV------------------------------------ELARSVFLEL 229
N ++ LC EG+V E ++ + + L
Sbjct: 487 FNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIML 546
Query: 230 KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFS 289
+ PN T+N +HG+C+ R+D+A QEM +G P V++Y+TI+ + FS
Sbjct: 547 SVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFS 606
Query: 290 KVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
+ EL M G ++ TY +++ L+K+ +EA+++ + + + D FN +I
Sbjct: 607 EAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMI 666
Query: 350 YTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH 409
L + R ++A+ ++ + NG+ PD +T+ + G E+ + EM K
Sbjct: 667 GALLKDGRKEDAMNLFAT-ISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEK-SG 724
Query: 410 CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCR 463
C PN + L++ G + L +++ + SL+ +T +++I R
Sbjct: 725 CAPNSLMLNFLVRRLLLRGDISRAGAYL--SKIDEKNFSLEASTTSMLISLFSR 776
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 150/316 (47%), Gaps = 10/316 (3%)
Query: 205 TMNLLLDTLCKEGKVELARSVF-LELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTI-Q 261
T ++L+ C+ G++E + F L LK+ + N + G C RV EA + +
Sbjct: 96 TYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEAMGVLLR 155
Query: 262 EMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM---QAQGCPPNVVTYTTVMSYLA 318
M GC P V+SY+T+++ +C + + ELL M Q + CPPN+V+Y TV++
Sbjct: 156 RMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVINGFF 215
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDT 378
G ++A + M G P+ + +I L +A V A V+Q +M + GV P+
Sbjct: 216 TEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQ-QMIDKGVRPNI 274
Query: 379 STFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLL 438
T+ +I + G ++ +L+EM+ +P+ T+ LL K GK E +L
Sbjct: 275 VTYTCLIHGYLSIGQWKEVVRMLKEMSA-HGLEPDCFTYGLLLDYLCKKGKCTEA-RKLF 332
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQ 498
D M+ K + D++ Y +++HG + M+G+ I+P + ++ +
Sbjct: 333 DSMIRKG-IKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAK 391
Query: 499 KHMYDAAEKIEAVMKK 514
K M A I M++
Sbjct: 392 KAMIGEAMDIFNKMRQ 407
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 5/187 (2%)
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG-SKPDSRFFNCLIYTLGRASRVQEAVY 363
P+V TY+ ++ + G E + G D N L+ L A RV EA+
Sbjct: 92 PDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEAMG 151
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM--NKLEHCKPNVQTFHPLL 421
V M E G P+ ++NT++ F E+A +L M ++ C PN+ +++ ++
Sbjct: 152 VLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVI 211
Query: 422 KSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHD 481
F G+ D+ + LD + + ++ TYT+VI GLC+A + A +F++MI
Sbjct: 212 NGFFTEGQVDKAYNLFLD--MTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKG 269
Query: 482 ITPRYQT 488
+ P T
Sbjct: 270 VRPNIVT 276
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 106/436 (24%), Positives = 199/436 (45%), Gaps = 59/436 (13%)
Query: 103 VNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSE--------------------------- 135
V+K + + K D KSAL F+ AG+ G+ H++E
Sbjct: 97 VSKALVKLKGDPKSALKFFKEAGARAGFRHAAESYCVLAHILFCGMFYLDARSVIKEWIL 156
Query: 136 --------------------------IYEMMVDILGKVRQMDQMRALLEEMSKGHIV-TL 168
+++ + ++L + +++ R +M+K ++ +
Sbjct: 157 LGREFPGCDFFDMLWSTRNVCRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKV 216
Query: 169 NTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE 228
+ +++ R S + + A+ F ++ GL + T N+++ L +EG +E ARS+F E
Sbjct: 217 RSCNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEE 276
Query: 229 LKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYN 287
+K+ + P+ T+N I G+ K+ + A +EMK GC P VI+Y+++I +C+
Sbjct: 277 MKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFER 336
Query: 288 FSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNC 347
+ +E L M+ +G PNVVTY+T++ K+G EA + M VG +P+ +
Sbjct: 337 IPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTS 396
Query: 348 LIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKL 407
LI + + EA + + EM + GV + T+ ++ G +A + + K
Sbjct: 397 LIDANCKIGDLNEA-FKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLK- 454
Query: 408 EHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKC 467
N Q + L K ++ + +L++M NK +L D+ Y I GLCR N+
Sbjct: 455 AGWTLNQQIYTSLFHGYIKAKMMEKAM-DILEEM-NKKNLKPDLLLYGTKIWGLCRQNEI 512
Query: 468 EWAYLLFKEMIGHDIT 483
E + + +EM+ +T
Sbjct: 513 EDSMAVIREMMDCGLT 528
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/422 (25%), Positives = 188/422 (44%), Gaps = 48/422 (11%)
Query: 104 NKLIHRFKDDWKSALGI-FRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-S 161
N+L+HR K L + F G S Y M++ L + ++ R+L EEM +
Sbjct: 220 NELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKA 279
Query: 162 KG---HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
KG IVT N++ + + G AV F+E+ G E + T N L++ CK +
Sbjct: 280 KGLRPDIVTYNSL---IDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFER 336
Query: 219 VELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
+ A +K + PN T++ I +CK + EA +M G P +Y++
Sbjct: 337 IPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTS 396
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF-------------- 323
+I + C+ + ++ ++L EMQ G N+VTYT ++ L + G
Sbjct: 397 LIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAG 456
Query: 324 ---------------------EEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
E+A+ I E+M KPD + I+ L R + +++++
Sbjct: 457 WTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSM 516
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLK 422
V + EM + G+ ++ + T+I + G +A ++L+EM L K V T+ L+
Sbjct: 517 AVIR-EMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDL-GIKITVVTYGVLID 574
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
K G + + D + ++ L +I YT +I GLC+ + E A LF EM+ I
Sbjct: 575 GLCKIGLVQQAVRYF--DHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGI 632
Query: 483 TP 484
+P
Sbjct: 633 SP 634
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 138/313 (44%), Gaps = 5/313 (1%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTF 240
G +A + E+ G+ N T LLD LC++G++ A +F L K+ N +
Sbjct: 405 GDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIY 464
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
HG+ K +++A ++EM P ++ Y T I CRQ ++ EM
Sbjct: 465 TSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMD 524
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
G N YTT++ K G EA+ + ++M+ +G K + LI L + VQ+
Sbjct: 525 CGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQ 584
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
AV + M NG+ P+ + +I + E+A ++ EM + P+ + L
Sbjct: 585 AVRYFD-HMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLD-KGISPDKLVYTSL 642
Query: 421 LKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH 480
+ K G E LS L + + + + LD+ YT +I G R + + A L EM+
Sbjct: 643 IDGNMKHGNPGEALS--LRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRK 700
Query: 481 DITPRYQTCRLIL 493
I P C +L
Sbjct: 701 GIIPDQVLCICLL 713
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 123/280 (43%), Gaps = 5/280 (1%)
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYEL 294
P F+ + + ++EA+ +M P V S + ++ +
Sbjct: 179 PGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSF 238
Query: 295 LDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGR 354
+M G P+V TY V+ LA+ GD E A + E+MK G +PD +N LI G+
Sbjct: 239 FKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGK 298
Query: 355 ASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNV 414
+ AV V++ EM + G PD T+N++I F +AF L M K +PNV
Sbjct: 299 VGMLTGAVSVFE-EMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGM-KQRGLQPNV 356
Query: 415 QTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLF 474
T+ L+ + K G E ++ DM+ + L + TYT +I C+ A+ L
Sbjct: 357 VTYSTLIDAFCKAGMLLEA-NKFFVDMI-RVGLQPNEFTYTSLIDANCKIGDLNEAFKLE 414
Query: 475 KEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEAVMK 513
EM + T +LD + + M +A E A++K
Sbjct: 415 SEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLK 454
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 125/280 (44%), Gaps = 3/280 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDA 187
G+ + +IY + K + M++ +LEEM+K ++ L + + ED+
Sbjct: 456 GWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDS 515
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHG 246
+ E+ GL N+ L+D K GK A ++ E++ I T+ + I G
Sbjct: 516 MAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDG 575
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
CKI V +A M +G P ++ Y+ +I C+ + L +EM +G P+
Sbjct: 576 LCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPD 635
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
+ YT+++ K G+ EA+ + +M +G + D + LI+ R +VQ A +
Sbjct: 636 KLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLD 695
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNK 406
EM G+ PD ++ + G +A + ++M +
Sbjct: 696 -EMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDMAR 734
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 96/210 (45%), Gaps = 4/210 (1%)
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
P V + ++ L+KS A+ + M + G P +N +I L R ++ A +
Sbjct: 214 PKVRSCNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSL 273
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
++ EM G+ PD T+N++I + G A V EEM K C+P+V T++ L+
Sbjct: 274 FE-EMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEM-KDAGCEPDVITYNSLINCF 331
Query: 425 FKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
K + + L + + L ++ TY+ +I C+A A F +MI + P
Sbjct: 332 CKFERIPQAFEYL--HGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQP 389
Query: 485 RYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
T ++D + + A K+E+ M++
Sbjct: 390 NEFTYTSLIDANCKIGDLNEAFKLESEMQQ 419
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 91/206 (44%), Gaps = 4/206 (1%)
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
C P + T+ + L G EEA + KM P R N L++ L ++S+ A+
Sbjct: 177 CRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLAL 236
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLK 422
++ +M G++P T+N +I + G E A + EEM K + +P++ T++ L+
Sbjct: 237 SFFK-DMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEM-KAKGLRPDIVTYNSLID 294
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
K G +S + ++M + D+ TY +I+ C+ + A+ M +
Sbjct: 295 GYGKVGMLTGAVS-VFEEMKDA-GCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGL 352
Query: 483 TPRYQTCRLILDEVKQKHMYDAAEKI 508
P T ++D + M A K
Sbjct: 353 QPNVVTYSTLIDAFCKAGMLLEANKF 378
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 174/348 (50%), Gaps = 14/348 (4%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQWEDAVRTF 191
+Y ++D + K ++ +L M K ++V NT V++ A +W++A
Sbjct: 288 MYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNT---VLKGLCSAERWKEAEELL 344
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS--CIPPNAHTFNIFIHGWCK 249
E+ + T N+L+D C+ G V+ + ++ S C+P + T+ I+G+CK
Sbjct: 345 SEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMP-DVITYTTVINGFCK 403
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
+DEA ++ M GC P +SY+ +++ C + EL+ +M QGCPPN VT
Sbjct: 404 EGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVT 463
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM 369
+ T++++L K G E+AI + ++M + G PD ++ +I LG+A + +EA+ + V M
Sbjct: 464 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV-M 522
Query: 370 PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
G++P+T ++++ S G K + + + K + + ++ ++ S K +
Sbjct: 523 VNKGISPNTIIYSSIACALSREGRVNKVIQMFDNI-KDTTIRSDAVLYNAVISSLCKRWE 581
Query: 430 TDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
TD + MV+ + + +TYT++I GL + A L E+
Sbjct: 582 TDRAI-DFFAYMVSNGCMP-NESTYTMLIKGLASEGLAKEAQELLSEL 627
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 161/328 (49%), Gaps = 9/328 (2%)
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK--SCIPPNAH 238
+G + ++VR + + G +T NL+L+ +C++G V+ A + +L C +
Sbjct: 159 SGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGC-EADIV 217
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
++N + G C R + + + EM C P +++++T+I CR F +V+E+L +M
Sbjct: 218 SYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQM 277
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRV 358
GC P++ Y T++ + K G E A I +M G KP+ +N ++ L A R
Sbjct: 278 SEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERW 337
Query: 359 QEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH-CKPNVQTF 417
+EA + EM + D TFN ++ F +G ++ +LE+M L H C P+V T+
Sbjct: 338 KEAEELLS-EMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM--LSHGCMPDVITY 394
Query: 418 HPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
++ K G DE + LL M + + +YT+V+ GLC A + A L +M
Sbjct: 395 TTVINGFCKEGLIDEAV-MLLKSM-SSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM 452
Query: 478 IGHDITPRYQTCRLILDEVKQKHMYDAA 505
I P T +++ + +K + + A
Sbjct: 453 IQQGCPPNPVTFNTLINFLCKKGLVEQA 480
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 162/345 (46%), Gaps = 7/345 (2%)
Query: 170 TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--L 227
T V+R G+ DA+ DE+ G +++L+ C+ G + V +
Sbjct: 113 TFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM 172
Query: 228 ELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYN 287
K C + N+ ++ C+ VDEA ++++ GC ++SY+ +++ C
Sbjct: 173 HAKGCTLDTGNC-NLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKR 231
Query: 288 FSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNC 347
+ V EL+DEM C PN+VT+ T++ YL ++G FE + +M G PD R +
Sbjct: 232 WGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYAT 291
Query: 348 LIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKL 407
+I + + ++ A + MP G+ P+ +NT++ ++A +L EM +
Sbjct: 292 IIDGICKEGHLEVANEILN-RMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQ- 349
Query: 408 EHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKC 467
+ C + TF+ L+ + G D + +LL+ M++ H D+ TYT VI+G C+
Sbjct: 350 KDCPLDDVTFNILVDFFCQNGLVDRVI-ELLEQMLS-HGCMPDVITYTTVINGFCKEGLI 407
Query: 468 EWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
+ A +L K M P + ++L + + AE++ + M
Sbjct: 408 DEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM 452
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 128/272 (47%), Gaps = 6/272 (2%)
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
+PPNA+TF + G C R+ +A + EM GC P Y I+++ CR F
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
+L+ M A+GC + V++ + + G +EA+ + K+ G + D +N ++ L
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH-CK 411
A R + + EM AP+ TFNT+I +G E+ VL +M+ EH C
Sbjct: 227 CMAKRWGDVEELMD-EMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMS--EHGCT 283
Query: 412 PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAY 471
P+++ + ++ K G E +++L+ M + L ++ Y V+ GLC A + + A
Sbjct: 284 PDIRMYATIIDGICKEGHL-EVANEILNRM-PSYGLKPNVVCYNTVLKGLCSAERWKEAE 341
Query: 472 LLFKEMIGHDITPRYQTCRLILDEVKQKHMYD 503
L EM D T +++D Q + D
Sbjct: 342 ELLSEMFQKDCPLDDVTFNILVDFFCQNGLVD 373
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 77/168 (45%), Gaps = 2/168 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
+ +++ L K ++Q LL++M G L + + V+ AG+ E+A+ + +
Sbjct: 464 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMV 523
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVD 254
G+ NT + + L +EG+V +F +K + I +A +N I CK D
Sbjct: 524 NKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETD 583
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
A M +GC P +Y+ +I+ + + ELL E+ ++G
Sbjct: 584 RAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 45/243 (18%), Positives = 89/243 (36%), Gaps = 42/243 (17%)
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
V++Y+ ++ YCR + L + PPN T+ V+ L G +A+ + +
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAVPV---PPNAYTFFPVVRGLCTRGRIADALEVLD 135
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHH 391
+M G P ++ ++ R+ + +V V + M G DT N ++
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEA-MHAKGCTLDTGNCNLVLNAICEQ 194
Query: 392 GHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDI 451
G ++A +L ++ C+ DI
Sbjct: 195 GCVDEAVGLLRKL-AFFGCEA-------------------------------------DI 216
Query: 452 TTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAV 511
+Y V+ GLC A + L EM+ D P T ++ + + +++ ++ A
Sbjct: 217 VSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQ 276
Query: 512 MKK 514
M +
Sbjct: 277 MSE 279
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 174/348 (50%), Gaps = 14/348 (4%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQWEDAVRTF 191
+Y ++D + K ++ +L M K ++V NT V++ A +W++A
Sbjct: 288 MYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNT---VLKGLCSAERWKEAEELL 344
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS--CIPPNAHTFNIFIHGWCK 249
E+ + T N+L+D C+ G V+ + ++ S C+P + T+ I+G+CK
Sbjct: 345 SEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMP-DVITYTTVINGFCK 403
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
+DEA ++ M GC P +SY+ +++ C + EL+ +M QGCPPN VT
Sbjct: 404 EGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVT 463
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM 369
+ T++++L K G E+AI + ++M + G PD ++ +I LG+A + +EA+ + V M
Sbjct: 464 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV-M 522
Query: 370 PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
G++P+T ++++ S G K + + + K + + ++ ++ S K +
Sbjct: 523 VNKGISPNTIIYSSIACALSREGRVNKVIQMFDNI-KDTTIRSDAVLYNAVISSLCKRWE 581
Query: 430 TDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
TD + MV+ + + +TYT++I GL + A L E+
Sbjct: 582 TDRAI-DFFAYMVSNGCMP-NESTYTMLIKGLASEGLAKEAQELLSEL 627
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 161/328 (49%), Gaps = 9/328 (2%)
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK--SCIPPNAH 238
+G + ++VR + + G +T NL+L+ +C++G V+ A + +L C +
Sbjct: 159 SGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGC-EADIV 217
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
++N + G C R + + + EM C P +++++T+I CR F +V+E+L +M
Sbjct: 218 SYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQM 277
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRV 358
GC P++ Y T++ + K G E A I +M G KP+ +N ++ L A R
Sbjct: 278 SEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERW 337
Query: 359 QEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH-CKPNVQTF 417
+EA + EM + D TFN ++ F +G ++ +LE+M L H C P+V T+
Sbjct: 338 KEAEELLS-EMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM--LSHGCMPDVITY 394
Query: 418 HPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
++ K G DE + LL M + + +YT+V+ GLC A + A L +M
Sbjct: 395 TTVINGFCKEGLIDEAV-MLLKSM-SSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM 452
Query: 478 IGHDITPRYQTCRLILDEVKQKHMYDAA 505
I P T +++ + +K + + A
Sbjct: 453 IQQGCPPNPVTFNTLINFLCKKGLVEQA 480
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 162/345 (46%), Gaps = 7/345 (2%)
Query: 170 TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--L 227
T V+R G+ DA+ DE+ G +++L+ C+ G + V +
Sbjct: 113 TFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM 172
Query: 228 ELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYN 287
K C + N+ ++ C+ VDEA ++++ GC ++SY+ +++ C
Sbjct: 173 HAKGCTLDTGNC-NLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKR 231
Query: 288 FSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNC 347
+ V EL+DEM C PN+VT+ T++ YL ++G FE + +M G PD R +
Sbjct: 232 WGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYAT 291
Query: 348 LIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKL 407
+I + + ++ A + MP G+ P+ +NT++ ++A +L EM +
Sbjct: 292 IIDGICKEGHLEVANEILN-RMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQ- 349
Query: 408 EHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKC 467
+ C + TF+ L+ + G D + +LL+ M++ H D+ TYT VI+G C+
Sbjct: 350 KDCPLDDVTFNILVDFFCQNGLVDRVI-ELLEQMLS-HGCMPDVITYTTVINGFCKEGLI 407
Query: 468 EWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
+ A +L K M P + ++L + + AE++ + M
Sbjct: 408 DEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM 452
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 128/272 (47%), Gaps = 6/272 (2%)
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
+PPNA+TF + G C R+ +A + EM GC P Y I+++ CR F
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
+L+ M A+GC + V++ + + G +EA+ + K+ G + D +N ++ L
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH-CK 411
A R + + EM AP+ TFNT+I +G E+ VL +M+ EH C
Sbjct: 227 CMAKRWGDVEELMD-EMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMS--EHGCT 283
Query: 412 PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAY 471
P+++ + ++ K G E +++L+ M + L ++ Y V+ GLC A + + A
Sbjct: 284 PDIRMYATIIDGICKEGHL-EVANEILNRM-PSYGLKPNVVCYNTVLKGLCSAERWKEAE 341
Query: 472 LLFKEMIGHDITPRYQTCRLILDEVKQKHMYD 503
L EM D T +++D Q + D
Sbjct: 342 ELLSEMFQKDCPLDDVTFNILVDFFCQNGLVD 373
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 77/168 (45%), Gaps = 2/168 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
+ +++ L K ++Q LL++M G L + + V+ AG+ E+A+ + +
Sbjct: 464 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMV 523
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVD 254
G+ NT + + L +EG+V +F +K + I +A +N I CK D
Sbjct: 524 NKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETD 583
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
A M +GC P +Y+ +I+ + + ELL E+ ++G
Sbjct: 584 RAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 45/243 (18%), Positives = 89/243 (36%), Gaps = 42/243 (17%)
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
V++Y+ ++ YCR + L + PPN T+ V+ L G +A+ + +
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAVPV---PPNAYTFFPVVRGLCTRGRIADALEVLD 135
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHH 391
+M G P ++ ++ R+ + +V V + M G DT N ++
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEA-MHAKGCTLDTGNCNLVLNAICEQ 194
Query: 392 GHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDI 451
G ++A +L ++ C+ DI
Sbjct: 195 GCVDEAVGLLRKL-AFFGCEA-------------------------------------DI 216
Query: 452 TTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAV 511
+Y V+ GLC A + L EM+ D P T ++ + + +++ ++ A
Sbjct: 217 VSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQ 276
Query: 512 MKK 514
M +
Sbjct: 277 MSE 279
>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 146/313 (46%), Gaps = 5/313 (1%)
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSC 232
+MR + AV + G+ + T L+ LC V+ A + E+ +S
Sbjct: 100 LMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESG 159
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
I PN ++ +HG+CK R + +EM G G P V+ Y+ +I S CR K
Sbjct: 160 IEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAA 219
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
++D M +G PNVVTY +++ + K G EA+ + + M G +PD +N LI L
Sbjct: 220 RVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGL 279
Query: 353 GRASRVQEAVYVYQVEM-PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCK 411
+ EA+ + + M E V PD TFN++I G +A V M + C+
Sbjct: 280 SSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAE-NGCR 338
Query: 412 PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAY 471
N+ F+ L+ + K + + +L+D+M + L D TY+++I+G C+ + E A
Sbjct: 339 CNLVAFNLLIGGLLRVHKVKKAM-ELMDEMASS-GLQPDSFTYSILINGFCKMRQVERAE 396
Query: 472 LLFKEMIGHDITP 484
EM + P
Sbjct: 397 SYLSEMRHQGMEP 409
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 196/421 (46%), Gaps = 14/421 (3%)
Query: 95 AIQPSHYLVNKLIHRFKDDWKSA--LGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQ 152
A +P+ L+ D ++A +G+ R C G Y ++ L +D
Sbjct: 89 ASRPNAISYTTLMRALCADRRAAQAVGLLRSMQDC-GVRPDVVTYGTLIRGLCDAADVDT 147
Query: 153 MRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLD 211
LL EM + I + + ++ + G+WE + F+E+ G+E + L+D
Sbjct: 148 AVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALID 207
Query: 212 TLCKEGKVE-LARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHP 270
+LC+ GKV+ AR + + + + PN T+N+ I+ CK V EA + M G P
Sbjct: 208 SLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQP 267
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEMQAQG---CPPNVVTYTTVMSYLAKSGDFEEAI 327
V++Y+T+I + LL+EM QG P+++T+ +V+ L K G +A+
Sbjct: 268 DVVTYNTLITGLSSVLEMDEAMALLEEMM-QGETRVRPDLMTFNSVIHGLCKIGWMRQAL 326
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITM 387
++ M G + + FN LI L R +V++A+ + EM +G+ PD+ T++ +I
Sbjct: 327 QVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMD-EMASSGLQPDSFTYSILING 385
Query: 388 FSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHL 447
F E+A L EM + + +P + PLLK+ G + L ++M +
Sbjct: 386 FCKMRQVERAESYLSEM-RHQGMEPEPVHYIPLLKAMCDQGMMGQA-RDLFNEM--DRNC 441
Query: 448 SLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEK 507
LD Y+ +IHG ++ + + A K+MI + P T + ++ + AAE+
Sbjct: 442 KLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAER 501
Query: 508 I 508
+
Sbjct: 502 V 502
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 136/267 (50%), Gaps = 6/267 (2%)
Query: 201 KNTETMNLLLDTLCKEGKVELA----RSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEA 256
++ + N +L LC++G ++ A R + E + PNA ++ + C R +A
Sbjct: 54 RDAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQA 113
Query: 257 QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSY 316
++ M+ G P V++Y T+I+ C + ELL+EM G PNVV Y+ ++
Sbjct: 114 VGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHG 173
Query: 317 LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
K+G +E ++ E+M G +PD + LI +L R +V++A V + M E G+ P
Sbjct: 174 YCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDM-MTERGLEP 232
Query: 377 DTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQ 436
+ T+N +I G +A + + M++ + +P+V T++ L+ + DE ++
Sbjct: 233 NVVTYNVLINSMCKEGSVREALDLRKNMSE-KGVQPDVVTYNTLITGLSSVLEMDEAMAL 291
Query: 437 LLDDMVNKHHLSLDITTYTLVIHGLCR 463
L + M + + D+ T+ VIHGLC+
Sbjct: 292 LEEMMQGETRVRPDLMTFNSVIHGLCK 318
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/410 (22%), Positives = 179/410 (43%), Gaps = 49/410 (11%)
Query: 94 NAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDIL---GKVR 148
+ I+P+ + + L+H + W+S +F S G E +Y ++D L GKV+
Sbjct: 158 SGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEM-SGRGIEPDVVMYTALIDSLCRHGKVK 216
Query: 149 QMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN 207
+ ++ ++ E + ++VT N + M + G +A+ + G++ + T N
Sbjct: 217 KAARVMDMMTERGLEPNVVTYNVLINSMCK---EGSVREALDLRKNMSEKGVQPDVVTYN 273
Query: 208 LLLDTLCKEGKVELARSVFLEL---KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
L+ L +++ A ++ E+ ++ + P+ TFN IHG CKI + +A M
Sbjct: 274 TLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMA 333
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
+GC +++++ +I R + K EL+DEM + G P+ TY+ +++ K E
Sbjct: 334 ENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVE 393
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYT----------------LGRASRVQEAVYVYQV- 367
A +M+ G +P+ + L+ + R ++ A Y +
Sbjct: 394 RAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRNCKLDAAAYSTMIH 453
Query: 368 ----------------EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCK 411
+M + G+ PD T++ I MF+ G A VL++M
Sbjct: 454 GAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTA-SGFV 512
Query: 412 PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGL 461
P+V F L++ G T++ L +L +M K ++LD + ++ L
Sbjct: 513 PDVAVFDSLIQGYGAKGDTEKIL-ELTREMTAK-DVALDPKIISTIVTSL 560
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 7/220 (3%)
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQ---GCPPNVVTYTTVMSYLAKSGDFEEAIR 328
+SY+T++ + CRQ LL M + PN ++YTT+M L +A+
Sbjct: 56 AVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVG 115
Query: 329 ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF 388
+ M+ G +PD + LI L A+ V AV + EM E+G+ P+ ++ ++ +
Sbjct: 116 LLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLN-EMCESGIEPNVVVYSCLLHGY 174
Query: 389 SHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
G E V EEM+ +P+V + L+ S + GK + + DM+ + L
Sbjct: 175 CKTGRWESVGKVFEEMSG-RGIEPDVVMYTALIDSLCRHGKVKKAARVM--DMMTERGLE 231
Query: 449 LDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
++ TY ++I+ +C+ A L K M + P T
Sbjct: 232 PNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVT 271
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 111/260 (42%), Gaps = 2/260 (0%)
Query: 96 IQPSHYLVNKLIHRF-KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMR 154
++P N +IH K W R + G + + +++ L +V ++ +
Sbjct: 302 VRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAM 361
Query: 155 ALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTL 213
L++EM S G T + ++ F Q E A E+ G+E LL +
Sbjct: 362 ELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAM 421
Query: 214 CKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI 273
C +G + AR +F E+ +A ++ IHG K A+ +++M G P +
Sbjct: 422 CDQGMMGQARDLFNEMDRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAV 481
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
+YS I + + + + +L +M A G P+V + +++ GD E+ + +T +M
Sbjct: 482 TYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKILELTREM 541
Query: 334 KIVGSKPDSRFFNCLIYTLG 353
D + + ++ +LG
Sbjct: 542 TAKDVALDPKIISTIVTSLG 561
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 83/185 (44%), Gaps = 17/185 (9%)
Query: 314 MSYLAKSGDFEEAIRITEKMKIVG------------SKPDSRFFNCLIYTLGRASRVQEA 361
++ L + G E A R+ ++++ S D+ +N ++ L R + A
Sbjct: 16 LAVLLRRGRGEAAARLNRHLRLLPLPESPALLSALPSVRDAVSYNTVLAALCRQGCLDAA 75
Query: 362 VYVYQVEMPENGVA--PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
+++ +V E +A P+ ++ T++ +A +L M +P+V T+
Sbjct: 76 LFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGLLRSMQDC-GVRPDVVTYGT 134
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
L++ D + +LL++M + + ++ Y+ ++HG C+ + E +F+EM G
Sbjct: 135 LIRGLCDAADVDTAV-ELLNEMC-ESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSG 192
Query: 480 HDITP 484
I P
Sbjct: 193 RGIEP 197
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1164
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 179/365 (49%), Gaps = 12/365 (3%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQW 184
GY Y +++ + ++D++ L+E+M K + T +I ++ R +
Sbjct: 699 GYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEA 758
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIF 243
E+A F E+ G+ +T L+D CK G + A F E+ S I P+ T+
Sbjct: 759 EEA---FSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAI 815
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
I G+C+I + EA EM G P +I+++ ++ YC+ + + + + M GC
Sbjct: 816 ISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGC 875
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
PNVVTYTT++ L K GD + A + +M +G +P+ +N ++ L ++ ++EAV
Sbjct: 876 SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 935
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
+ E G+ DT T+ T++ + G +KA +L EM + +P + TF+ L+
Sbjct: 936 LVG-EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLG-KGLQPTIVTFNVLMNG 993
Query: 424 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
G ++ +LL+ M+ K ++ + TT+ ++ C N + A ++K+M +
Sbjct: 994 FCLHGMLEDG-EKLLNWMLAK-GIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVE 1051
Query: 484 PRYQT 488
P +T
Sbjct: 1052 PDGKT 1056
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 188/411 (45%), Gaps = 42/411 (10%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFS-GAGQWEDAVRTFDE 193
++++ +L + + + R + E+M + G ++++++ + R S + A+ F E
Sbjct: 600 VFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFRE 659
Query: 194 LGTFGLEKNTETMNLLLDTLCKEGKVELARSVFL--ELKSCIP----------------- 234
G+ N + N+++ +C+ G++ A + L ELK P
Sbjct: 660 FPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGE 719
Query: 235 -----------------PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
PN++T+ I C+I ++ EA+ EM G G P I Y+T
Sbjct: 720 LDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTT 779
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
++ +C++ + + EM ++ P+V+TYT ++S + GD EA ++ +M G
Sbjct: 780 LVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRG 839
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKA 397
+PD F L+ +A +++A V+ M + G +P+ T+ T+I G + A
Sbjct: 840 LEPDIITFTELMNGYCKAGHIKDAFRVHN-HMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 898
Query: 398 FHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLV 457
+L EM K+ +PN+ T++ ++ K+G +E + L L+ D TYT +
Sbjct: 899 NELLHEMWKI-GLQPNIFTYNSIVNGLCKSGNIEEAVK--LVGEFEAAGLNADTVTYTTL 955
Query: 458 IHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+ C++ + + A + EM+G + P T ++++ M + EK+
Sbjct: 956 MDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL 1006
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/402 (21%), Positives = 168/402 (41%), Gaps = 57/402 (14%)
Query: 90 DHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYE-HSSEI------YEMM 140
+ + I P + L+ F + D ++A F YE HS +I Y +
Sbjct: 764 EMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFF--------YEMHSRDITPDVLTYTAI 815
Query: 141 VDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGL 199
+ ++ M + L EM +G + T ++M + AG +DA R + + G
Sbjct: 816 ISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGC 875
Query: 200 EKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHG------------ 246
N T L+D LCKEG ++ A + E+ K + PN T+N ++G
Sbjct: 876 SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 935
Query: 247 -----------------------WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYC 283
+CK +D+AQ + EM G G P +++++ ++ +C
Sbjct: 936 LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFC 995
Query: 284 RQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSR 343
+LL+ M A+G PN T+ ++ + + A I + M G +PD +
Sbjct: 996 LHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGK 1055
Query: 344 FFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEE 403
+ L+ A ++EA +++Q EM G + ST++ +I F +A + ++
Sbjct: 1056 TYENLVKGHCNARNMKEAWFLFQ-EMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQ 1114
Query: 404 MNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKH 445
M + + + + F + +K GK + + +D+++ +
Sbjct: 1115 MRR-DGLAADKEIFDFFSDTKYK-GKRPDTIVDPIDEIIENY 1154
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 157/330 (47%), Gaps = 11/330 (3%)
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHG 246
V T+ + G+ + ++ L + G + AR VF + L + + + N+++
Sbjct: 588 VYTYKDWGS-----DPRVFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLAR 642
Query: 247 WCK-INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
K N+ A +E G V SY+ +I C+ ++ + LL M+ +G P
Sbjct: 643 LSKDCNKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTP 702
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
+V++Y+TV++ + G+ ++ ++ EKMK G KP+S + +I L R ++ EA +
Sbjct: 703 DVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAF 762
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
EM G+ PDT + T++ F G A EM+ + P+V T+ ++
Sbjct: 763 S-EMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRD-ITPDVLTYTAIISGFC 820
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
+ G E +L +M+ + L DI T+T +++G C+A + A+ + MI +P
Sbjct: 821 QIGDMVEA-GKLFHEMLCRG-LEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPN 878
Query: 486 YQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
T ++D + ++ D+A ++ M K+
Sbjct: 879 VVTYTTLIDGLCKEGDLDSANELLHEMWKI 908
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 91/198 (45%), Gaps = 14/198 (7%)
Query: 25 FHSSSENCSHIVSSSPIESYCSDGARLDHHQVLCVD------SPRLPDIDVIISKVHV-G 77
F ++ N + ++ +++YC G +D Q + + P + +V+++ + G
Sbjct: 940 FEAAGLNADTVTYTTLMDAYCKSG-EMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHG 998
Query: 78 SSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSE 135
ED + L + I P+ N L+ ++ +++ K+A I++ S G E +
Sbjct: 999 MLEDG--EKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCS-RGVEPDGK 1055
Query: 136 IYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
YE +V R M + L +EM KG V+++T + +++ F ++ +A FD++
Sbjct: 1056 TYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQM 1115
Query: 195 GTFGLEKNTETMNLLLDT 212
GL + E + DT
Sbjct: 1116 RRDGLAADKEIFDFFSDT 1133
>gi|242054767|ref|XP_002456529.1| hypothetical protein SORBIDRAFT_03g037920 [Sorghum bicolor]
gi|241928504|gb|EES01649.1| hypothetical protein SORBIDRAFT_03g037920 [Sorghum bicolor]
Length = 517
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 180/378 (47%), Gaps = 8/378 (2%)
Query: 128 PGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDA 187
PGY M+ IL K R+ D RALL+EM + + + + ++RR A A
Sbjct: 131 PGYAPGRRACHSMLAILAKHRRFDAARALLDEMRRASMASPAAVLLLVRRHCAARDVAAA 190
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGW 247
V F L +FG + + LL LC+ V+ A + + + P +FNI ++GW
Sbjct: 191 VAAFRALPSFGFDTGVAEFHGLLSALCRYKNVQDAEHLLISCEKEFPFETKSFNIVLNGW 250
Query: 248 CKIN-RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C I + EA+ M+ G V+SY ++I + + + V +L + M G P+
Sbjct: 251 CNIVCSLREAKRFWSSMERKGIDRDVVSYGSMISCFSKAGSLHSVMKLFNHMNEAGVAPD 310
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
Y ++ LAK + A + M+ PD+ FN LI L +A +VQEA+ ++
Sbjct: 311 RKVYNAIVFALAKGRCVKAAKMLVRTMEEKQVAPDTATFNSLIGPLCKARQVQEAMEMFD 370
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
M E G++P TF+ ++ + + + F +L++M +L+ C+P + T+ L++ F
Sbjct: 371 A-MLERGLSPSVRTFHALLNVAR---NSTEVFDLLDKMKQLQ-CEPEMDTYIMLIRK-FC 424
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
+ E + +L M + LS D + Y ++IHGL + E A + EM +P
Sbjct: 425 RWRQHESVEKLWSAM-PANGLSPDRSAYIVLIHGLFLNGRLEEAAKYYGEMKSKGFSPEK 483
Query: 487 QTCRLILDEVKQKHMYDA 504
+T +I ++ + + A
Sbjct: 484 KTEEMITAWLEGRELAKA 501
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 131/544 (24%), Positives = 241/544 (44%), Gaps = 62/544 (11%)
Query: 12 ARIPLNPLTSRIRFHSSSENCSHIVSSSPIESYCSDGARLDHHQVLCVDSPRLPDIDVII 71
R +NP T+ F+ +S++C + + SYC L V RL I +I
Sbjct: 153 VRRNVNPKTALNFFYFASDSCGFRFT---LRSYCVLMRSLIVSGF--VSPARLLLIRLID 207
Query: 72 SKVHV--GSSED---EVFQSLKQDHVCNAIQPSHYLVNKLIH----RFKD-DWKSALGIF 121
K+ V G ++ E+ ++ + + V+ LIH +F++ +++A+G+F
Sbjct: 208 RKLPVLFGDPKNRHIEIASAMADLNEVGESGVAVAAVDLLIHVYCTQFRNVGFRNAIGVF 267
Query: 122 RWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGA 181
R+ + G + + ++ L K ++++ + E M +G + + + F
Sbjct: 268 RFLAN-KGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQGVSPDVYLFSTAINAFCKG 326
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEG------------------------ 217
G+ EDA++ F ++ G+ N T N L+ LCK G
Sbjct: 327 GKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITY 386
Query: 218 -----------KVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKG 265
K A SV E L+ PN +N I G+CK+ + +A +M
Sbjct: 387 SVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVS 446
Query: 266 HGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEE 325
G +P ++ ++IIQ +C+ + +L+EM ++G N +TT++ +L + FE
Sbjct: 447 KGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFES 506
Query: 326 AIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMI 385
A+R +M + +P+ L+ L + + +AV ++ + E G + T N +I
Sbjct: 507 ALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELW-FRLLEKGFGANLVTTNALI 565
Query: 386 TMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKH 445
G+ ++A +L++M + + T++ L+ C K GK +E +L +MV K
Sbjct: 566 HGLCKTGNMQEAVRLLKKMLERGFVLDKI-TYNTLISGCCKEGKVEEGF-KLRGEMV-KQ 622
Query: 446 HLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
+ D TY L+IHG+CR K + A L+ E D+ P T +++D Y A
Sbjct: 623 GIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDG------YCKA 676
Query: 506 EKIE 509
+KIE
Sbjct: 677 DKIE 680
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 159/332 (47%), Gaps = 5/332 (1%)
Query: 151 DQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLL 210
D + + KG L T ++ G ++AVR ++ G + T N L+
Sbjct: 541 DAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLI 600
Query: 211 DTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCH 269
CKEGKVE + E+ K I P+ T+N+ IHG C+I ++DEA E K
Sbjct: 601 SGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLV 660
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI 329
P V +Y +I YC+ + +L E+ Q N V Y T++ ++G+ EA ++
Sbjct: 661 PNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKL 720
Query: 330 TEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFS 389
+ M+ G P + ++ LI+ + R+++A + EM + G+ P+ + +I +
Sbjct: 721 HDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLID-EMRKEGLLPNVVCYTALIGGYC 779
Query: 390 HHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSL 449
G +K +VL+EM+ + PN T+ ++ K+G ++LL +MV K +
Sbjct: 780 KLGQMDKVVNVLQEMSSYD-IHPNKITYTVMIDGYSKSGDMKTA-AKLLHEMVGKGIVP- 836
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMIGHD 481
D TY ++ +G C+ K E LL ++ +G +
Sbjct: 837 DTVTYNVLTNGFCKEGKIEEGKLLAEDGVGFN 868
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 177/372 (47%), Gaps = 7/372 (1%)
Query: 146 KVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTE 204
K+ QM+Q +LEEM S+G + ++ ++E A+R E+ + N
Sbjct: 465 KIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDG 524
Query: 205 TMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
+ L+ LCKEGK A ++ L + N T N IHG CK + EA +++M
Sbjct: 525 LLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKM 584
Query: 264 KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF 323
G I+Y+T+I C++ + ++L EM QG P+ TY ++ + + G
Sbjct: 585 LERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKL 644
Query: 324 EEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNT 383
+EA+ + + K P+ + +I +A +++E ++ + +N + ++ +NT
Sbjct: 645 DEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQN-LELNSVVYNT 703
Query: 384 MITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVN 443
+I + +G+ +AF + ++M + + P T+ L+ G+ ++ ++ L D +
Sbjct: 704 LIRAYCRNGNTVEAFKLHDDM-RSKGIPPTTATYSSLIHGMCNIGRMED--AKCLIDEMR 760
Query: 444 KHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMY 502
K L ++ YT +I G C+ + + + +EM +DI P T +++D K M
Sbjct: 761 KEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMK 820
Query: 503 DAAEKIEAVMKK 514
AA+ + ++ K
Sbjct: 821 TAAKLLHEMVGK 832
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 127/255 (49%), Gaps = 7/255 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEE-MSKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G E + Y +++ + ++ ++D+ L E S+ + + T ++ + A + E+
Sbjct: 623 GIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEG 682
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHG 246
+ F EL T LE N+ N L+ C+ G A + +++S IPP T++ IHG
Sbjct: 683 EKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHG 742
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C I R+++A+ I EM+ G P V+ Y+ +I YC+ KV +L EM + PN
Sbjct: 743 MCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPN 802
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
+TYT ++ +KSGD + A ++ +M G PD+ +N L + +++E
Sbjct: 803 KITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGKL--- 859
Query: 367 VEMPENGVAPDTSTF 381
+ E+GV ++ F
Sbjct: 860 --LAEDGVGFNSPLF 872
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 126/277 (45%), Gaps = 16/277 (5%)
Query: 87 LKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYE--MMVDIL 144
L+ + V I+P + N LIH K + W C + +Y +M+D
Sbjct: 615 LRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLW-NECKSRDLVPNVYTYGVMIDGY 673
Query: 145 GKVRQMDQMRALLEEMSKGHIVTLNTIA--KVMRRFSGAGQWEDAVRTFDELGTFGLEKN 202
K ++++ L E+ ++ LN++ ++R + G +A + D++ + G+
Sbjct: 674 CKADKIEEGEKLFTELLTQNL-ELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPT 732
Query: 203 TETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQ 261
T T + L+ +C G++E A+ + E+ K + PN + I G+CK+ ++D+ +Q
Sbjct: 733 TATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQ 792
Query: 262 EMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSG 321
EM + HP I+Y+ +I Y + + +LL EM +G P+ VTY + + K G
Sbjct: 793 EMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEG 852
Query: 322 DFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRV 358
EE + E D FN ++ + A R
Sbjct: 853 KIEEGKLLAE---------DGVGFNSPLFLIHEAFRA 880
>gi|357442883|ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|357501105|ref|XP_003620841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480767|gb|AES61970.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495856|gb|AES77059.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 524
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 163/328 (49%), Gaps = 22/328 (6%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
+Y ++D L K + + + L +M + + T + ++ F GQ+++A F E+
Sbjct: 190 MYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEM 249
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL------------------KSCIPPN 236
+ + T N+L+D LCKEG + ++V + K + P+
Sbjct: 250 VLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPD 309
Query: 237 AHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLD 296
H++ I I CKI VDEA EM+ G P ++YS++I C+ S +ELLD
Sbjct: 310 VHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLD 369
Query: 297 EMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRAS 356
+M A+G P +V+TYT+ + L K+ ++A+ + +K+K G +P+ +N LI L +
Sbjct: 370 QMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEG 429
Query: 357 RVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQT 416
R + A ++Q ++ G T+N MI G ++A +LE+M C P+V T
Sbjct: 430 RFENAQVIFQ-DLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMED-NGCTPDVVT 487
Query: 417 FHPLLKSCFKTGKTDECLSQLLDDMVNK 444
+ ++++ FK + + +LL +M+ +
Sbjct: 488 YETIIRALFKNDENHKA-EKLLREMIAR 514
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 162/369 (43%), Gaps = 39/369 (10%)
Query: 165 IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVE---- 220
IVT NT V+ + G+ + A ++ G +T T+ L+ LC GKV
Sbjct: 83 IVTFNT---VINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALH 139
Query: 221 -----LARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISY 275
+AR L N ++ I I+G CK+ A ++++ G + V+ Y
Sbjct: 140 FHDHVIARGFRL--------NEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMY 191
Query: 276 STIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKI 335
STII S C++ ++ YEL +M + P+VVT++ ++ G F+EA + +M +
Sbjct: 192 STIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVL 251
Query: 336 VGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE----------------NGVAPDTS 379
PD FN L+ L + +E V V M E V PD
Sbjct: 252 TNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVH 311
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLD 439
++ +I ++A + EM + + P+ T+ L+ K+ + +LLD
Sbjct: 312 SYTIIIKRLCKIKMVDEALSLFNEM-RCKGITPDKVTYSSLIDGLCKSERISHAW-ELLD 369
Query: 440 DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQK 499
M + + D+ TYT +H LC+ ++ + A L K++ I P T +++D + ++
Sbjct: 370 QMHARGQPA-DVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKE 428
Query: 500 HMYDAAEKI 508
++ A+ I
Sbjct: 429 GRFENAQVI 437
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 157/330 (47%), Gaps = 26/330 (7%)
Query: 186 DAVRTFDELGTFGLEKNTETMNLLLDTLCK--EGKVELARSVFLELK-SCIPPNAHTFNI 242
DA+ +F + + N +L +L K +A S++ L+ + I P+ TFN
Sbjct: 29 DAISSFYRMLRMNPSPSIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNAITPSIVTFNT 88
Query: 243 FIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL---DEMQ 299
I+ +C + +D A + ++ G HP I+ +T+I+ C KV+E L D +
Sbjct: 89 VINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLN---GKVHEALHFHDHVI 145
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
A+G N V+Y +++ L K G+ A+++ K+ + ++ +I +L + V
Sbjct: 146 ARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVT 205
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
EA +Y +M V+PD TF+ +I F G ++AF + EM L + P+V TF+
Sbjct: 206 EAYELYS-QMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEM-VLTNINPDVCTFNI 263
Query: 420 LLKSCFKTGKTDECLSQL---------------LDDMVNKHHLSLDITTYTLVIHGLCRA 464
L+ + K G T E + L + +++ K ++ D+ +YT++I LC+
Sbjct: 264 LVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKI 323
Query: 465 NKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
+ A LF EM ITP T ++D
Sbjct: 324 KMVDEALSLFNEMRCKGITPDKVTYSSLID 353
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 121/264 (45%), Gaps = 15/264 (5%)
Query: 41 IESYCSDGARLDHHQVLCVDSPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSH 100
+++ C +G+ + VL V ++ +V+ + VF + + V +
Sbjct: 265 VDALCKEGSTKETKNVLAV----------MMKEVNQVNKAKHVFNIIGKRRVTPDVHSYT 314
Query: 101 YLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM 160
++ +L D AL +F C G Y ++D L K ++ LL++M
Sbjct: 315 IIIKRLCKIKMVD--EALSLFNEM-RCKGITPDKVTYSSLIDGLCKSERISHAWELLDQM 371
Query: 161 -SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV 219
++G + T + Q + AV ++ G++ N T N+L+D LCKEG+
Sbjct: 372 HARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRF 431
Query: 220 ELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTI 278
E A+ +F +L T+NI I+G C DEA +++M+ +GC P V++Y TI
Sbjct: 432 ENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETI 491
Query: 279 IQSYCRQYNFSKVYELLDEMQAQG 302
I++ + K +LL EM A+G
Sbjct: 492 IRALFKNDENHKAEKLLREMIARG 515
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 112/247 (45%), Gaps = 6/247 (2%)
Query: 270 PCVISYSTIIQSYCR--QYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
P +I ++ I+ S + N+ L +Q P++VT+ TV++ G+ + A
Sbjct: 44 PSIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNAITPSIVTFNTVINCYCHLGEMDFAF 103
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITM 387
+ K+ +G PD+ LI L +V EA++ + + G + ++ +I
Sbjct: 104 SVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHD-HVIARGFRLNEVSYGILING 162
Query: 388 FSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHL 447
G A VL +++ + NV + ++ S K E +L M+ K +
Sbjct: 163 LCKMGETRAALQVLRKIDG-KLVNTNVVMYSTIIDSLCKEKLVTEAY-ELYSQMIVKK-V 219
Query: 448 SLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEK 507
S D+ T++ +I+G C + + A+ LF EM+ +I P T +++D + ++ +
Sbjct: 220 SPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKN 279
Query: 508 IEAVMKK 514
+ AVM K
Sbjct: 280 VLAVMMK 286
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 174/348 (50%), Gaps = 14/348 (4%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQWEDAVRTF 191
+Y ++D + K ++ +L M K ++V NT V++ A +W++A
Sbjct: 288 MYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNT---VLKGLCSAERWKEAEELL 344
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS--CIPPNAHTFNIFIHGWCK 249
E+ + T N+L+D C+ G V+ + ++ S C+P + T+ I+G+CK
Sbjct: 345 SEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMP-DVITYTTVINGFCK 403
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
+DEA ++ M GC P +SY+ +++ C + EL+ +M QGCPPN VT
Sbjct: 404 EGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVT 463
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM 369
+ T++++L K G E+AI + ++M + G PD ++ +I LG+A + +EA+ + V M
Sbjct: 464 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV-M 522
Query: 370 PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
G++P+T ++++ S G K + + + K + + ++ ++ S K +
Sbjct: 523 VNKGISPNTIIYSSIACALSREGRVNKVIQMFDNI-KDTTIRSDAVLYNAVISSLCKRWE 581
Query: 430 TDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
TD + MV+ + + +TYT++I GL + A L E+
Sbjct: 582 TDRAI-DFFAYMVSNGCMP-NESTYTMLIKGLASEGLAKEAQELLSEL 627
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 161/328 (49%), Gaps = 9/328 (2%)
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK--SCIPPNAH 238
+G + ++VR + + G +T NL+L+ +C++G V+ A + +L C +
Sbjct: 159 SGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGC-EADIV 217
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
++N + G C R + + + EM C P +++++T+I CR F +V+E+L +M
Sbjct: 218 SYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQM 277
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRV 358
GC P++ Y T++ + K G E A I +M G KP+ +N ++ L A R
Sbjct: 278 SEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERW 337
Query: 359 QEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH-CKPNVQTF 417
+EA + EM + D TFN ++ F +G ++ +LE+M L H C P+V T+
Sbjct: 338 KEAEELLS-EMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM--LSHGCMPDVITY 394
Query: 418 HPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
++ K G DE + LL M + + +YT+V+ GLC A + A L +M
Sbjct: 395 TTVINGFCKEGLIDEAV-MLLKSM-SSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM 452
Query: 478 IGHDITPRYQTCRLILDEVKQKHMYDAA 505
I P T +++ + +K + + A
Sbjct: 453 IQQGCPPNPVTFNTLINFLCKKGLVEQA 480
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 162/345 (46%), Gaps = 7/345 (2%)
Query: 170 TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--L 227
T V+R G+ DA+ DE+ G +++L+ C+ G + V +
Sbjct: 113 TFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM 172
Query: 228 ELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYN 287
K C + N+ ++ C+ VDEA ++++ GC ++SY+ +++ C
Sbjct: 173 HAKGCTLDTGNC-NLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKR 231
Query: 288 FSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNC 347
+ V EL+DEM C PN+VT+ T++ YL ++G FE + +M G PD R +
Sbjct: 232 WGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYAT 291
Query: 348 LIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKL 407
+I + + ++ A + MP G+ P+ +NT++ ++A +L EM +
Sbjct: 292 IIDGICKEGHLEVANEILN-RMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQ- 349
Query: 408 EHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKC 467
+ C + TF+ L+ + G D + +LL+ M++ H D+ TYT VI+G C+
Sbjct: 350 KDCPLDDVTFNILVDFFCQNGLVDRVI-ELLEQMLS-HGCMPDVITYTTVINGFCKEGLI 407
Query: 468 EWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
+ A +L K M P + ++L + + AE++ + M
Sbjct: 408 DEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM 452
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 128/272 (47%), Gaps = 6/272 (2%)
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
+PPNA+TF + G C R+ +A + EM GC P Y I+++ CR F
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
+L+ M A+GC + V++ + + G +EA+ + K+ G + D +N ++ L
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH-CK 411
A R + + EM AP+ TFNT+I +G E+ VL +M+ EH C
Sbjct: 227 CMAKRWGDVEELMD-EMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMS--EHGCT 283
Query: 412 PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAY 471
P+++ + ++ K G E +++L+ M + L ++ Y V+ GLC A + + A
Sbjct: 284 PDIRMYATIIDGICKEGHL-EVANEILNRM-PSYGLKPNVVCYNTVLKGLCSAERWKEAE 341
Query: 472 LLFKEMIGHDITPRYQTCRLILDEVKQKHMYD 503
L EM D T +++D Q + D
Sbjct: 342 ELLSEMFQKDCPLDDVTFNILVDFFCQNGLVD 373
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 77/168 (45%), Gaps = 2/168 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
+ +++ L K ++Q LL++M G L + + V+ AG+ E+A+ + +
Sbjct: 464 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMV 523
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVD 254
G+ NT + + L +EG+V +F +K + I +A +N I CK D
Sbjct: 524 NKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETD 583
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
A M +GC P +Y+ +I+ + + ELL E+ ++G
Sbjct: 584 RAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/243 (18%), Positives = 89/243 (36%), Gaps = 42/243 (17%)
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
V++Y+ ++ YCR + L + PPN T+ V+ L G +A+ + +
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAVPV---PPNAYTFFPVVRGLCTRGRIADALEVLD 135
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHH 391
+M G P ++ ++ R+ + +V V + M G DT N ++
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEA-MHAKGCTLDTGNCNLVLNAICEQ 194
Query: 392 GHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDI 451
G ++A +L ++ C+ DI
Sbjct: 195 GCVDEAVGLLRKL-AFFGCEA-------------------------------------DI 216
Query: 452 TTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAV 511
+Y V+ GLC A + L EM+ D P T ++ + + +++ ++ A
Sbjct: 217 VSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQ 276
Query: 512 MKK 514
M +
Sbjct: 277 MSE 279
>gi|356517404|ref|XP_003527377.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 696
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 154/303 (50%), Gaps = 4/303 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTI-AKVMRRFSGAGQWEDA 187
G + + Y +++D + + R +L+EM ++ + + ++++ + G+W+ +
Sbjct: 357 GVKPDEQTYSLLIDAYAHAGRWESARIVLKEMEASNVEPNSYVYSRILASYRDKGEWQKS 416
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHG 246
+ ++ + G++ + N+++DT K ++ A + F + S I P+ T+N I+
Sbjct: 417 FQVLKDMKSNGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLINC 476
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
CK R + A+ EM+ G PC+ +Y+ +I S Q + +V L +MQ+QG PN
Sbjct: 477 HCKSGRHNMAEELFGEMQQRGYSPCITTYNIMINSMGEQQRWEQVSLFLSKMQSQGLLPN 536
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
+TYTT++ KSG F +AI E +K G KP S +N LI + + AV ++
Sbjct: 537 SITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQRGLSELAVNAFR 596
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
+ M G+ P N++I F +AF VL+ M K + +P+V T+ L+K+ +
Sbjct: 597 L-MTTEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYM-KENNIEPDVVTYTTLMKALIR 654
Query: 427 TGK 429
K
Sbjct: 655 VEK 657
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 159/333 (47%), Gaps = 7/333 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQ--MRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWE 185
GY+ Y ++ L + ++D ++ L E+ I + + + ++ FS AG
Sbjct: 215 GYQPDFVNYSSIIQYLTRSNKIDSPILQKLYTEIETDKIEIDGHLMNDIILGFSKAGDPT 274
Query: 186 DAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFI 244
A+R + GL T+ ++ L G+ A ++F E++ + P +N +
Sbjct: 275 RAMRFLAMAQSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENGSEPRTRAYNALL 334
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
G+ K + +A++ + EM+ G P +YS +I +Y + +L EM+A
Sbjct: 335 KGYVKTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDAYAHAGRWESARIVLKEMEASNVE 394
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
PN Y+ +++ G+++++ ++ + MK G +PD F+N +I T G+ + + A+
Sbjct: 395 PNSYVYSRILASYRDKGEWQKSFQVLKDMKSNGVQPDRHFYNVMIDTFGKYNCLDHAMAT 454
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
++ M G+ PDT T+NT+I G H A + EM + + P + T++ ++ S
Sbjct: 455 FE-RMLSEGIRPDTVTWNTLINCHCKSGRHNMAEELFGEMQQRGYS-PCITTYNIMINSM 512
Query: 425 FKTGKTDECLSQLLDDMVNKHHLSLDITTYTLV 457
+ + ++ +S L M ++ L IT TLV
Sbjct: 513 GEQQRWEQ-VSLFLSKMQSQGLLPNSITYTTLV 544
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 138/325 (42%), Gaps = 45/325 (13%)
Query: 207 NLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
++L++ L + K L + L + + P T+N I + V++A + +M+
Sbjct: 159 SILINALGRSEK--LYEAFLLSQRQVLTP--LTYNALIGACARNGDVEKALNLMSKMRRD 214
Query: 267 GCHPCVISYSTIIQSYCRQ-------------------------------YNFSKVYE-- 293
G P ++YS+IIQ R FSK +
Sbjct: 215 GYQPDFVNYSSIIQYLTRSNKIDSPILQKLYTEIETDKIEIDGHLMNDIILGFSKAGDPT 274
Query: 294 ----LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
L Q+ G P T V+ L SG EA + E+++ GS+P +R +N L+
Sbjct: 275 RAMRFLAMAQSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENGSEPRTRAYNALL 334
Query: 350 YTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH 409
+ +++A +V EM + GV PD T++ +I ++H G E A VL+EM + +
Sbjct: 335 KGYVKTGSLKDAEFVVS-EMEKAGVKPDEQTYSLLIDAYAHAGRWESARIVLKEM-EASN 392
Query: 410 CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEW 469
+PN + +L S G+ + Q+L DM + + D Y ++I + N +
Sbjct: 393 VEPNSYVYSRILASYRDKGEWQKSF-QVLKDM-KSNGVQPDRHFYNVMIDTFGKYNCLDH 450
Query: 470 AYLLFKEMIGHDITPRYQTCRLILD 494
A F+ M+ I P T +++
Sbjct: 451 AMATFERMLSEGIRPDTVTWNTLIN 475
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 123/296 (41%), Gaps = 41/296 (13%)
Query: 87 LKQDHVCNAIQPSHYLVNKLIHRFKD--DWKSALGIFRWAGSCPGYEHSSEIYEMMVDIL 144
LK+ N ++P+ Y+ ++++ ++D +W+ + + + S G + Y +M+D
Sbjct: 385 LKEMEASN-VEPNSYVYSRILASYRDKGEWQKSFQVLKDMKSN-GVQPDRHFYNVMIDTF 442
Query: 145 GKVRQMDQMRALLEEM-SKG---HIVTLNTIAK--------------------------- 173
GK +D A E M S+G VT NT+
Sbjct: 443 GKYNCLDHAMATFERMLSEGIRPDTVTWNTLINCHCKSGRHNMAEELFGEMQQRGYSPCI 502
Query: 174 ----VMRRFSGAGQ-WEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE 228
+M G Q WE ++ + GL N+ T L+D K G+ A
Sbjct: 503 TTYNIMINSMGEQQRWEQVSLFLSKMQSQGLLPNSITYTTLVDVYGKSGRFSDAIECLEV 562
Query: 229 LKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYN 287
LKS P + +N I+ + + + A + M G P +++ +++I ++
Sbjct: 563 LKSTGFKPTSTMYNALINAYAQRGLSELAVNAFRLMTTEGLTPSLLALNSLINAFGEDRR 622
Query: 288 FSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSR 343
++ + +L M+ P+VVTYTT+M L + F++ + E+M G PD +
Sbjct: 623 DAEAFAVLQYMKENNIEPDVVTYTTLMKALIRVEKFQKVPAVYEEMVTSGCTPDRK 678
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 109/243 (44%), Gaps = 6/243 (2%)
Query: 273 ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI--RIT 330
++Y+ +I + R + K L+ +M+ G P+ V Y++++ YL +S + I ++
Sbjct: 186 LTYNALIGACARNGDVEKALNLMSKMRRDGYQPDFVNYSSIIQYLTRSNKIDSPILQKLY 245
Query: 331 EKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSH 390
+++ + D N +I +A A+ + NG+ P ST +I +
Sbjct: 246 TEIETDKIEIDGHLMNDIILGFSKAGDPTRAMRFLAMAQ-SNGLNPKPSTLVAVILALGN 304
Query: 391 HGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLD 450
G +A + EE+ + +P + ++ LLK KTG + ++ + + K + D
Sbjct: 305 SGRTHEAEALFEEIRE-NGSEPRTRAYNALLKGYVKTGSLKD--AEFVVSEMEKAGVKPD 361
Query: 451 ITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEA 510
TY+L+I A + E A ++ KEM ++ P IL + K + + ++
Sbjct: 362 EQTYSLLIDAYAHAGRWESARIVLKEMEASNVEPNSYVYSRILASYRDKGEWQKSFQVLK 421
Query: 511 VMK 513
MK
Sbjct: 422 DMK 424
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 174/348 (50%), Gaps = 14/348 (4%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQWEDAVRTF 191
+Y ++D + K ++ +L M K ++V NT V++ A +W++A
Sbjct: 288 MYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNT---VLKGLCSAERWKEAEELL 344
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS--CIPPNAHTFNIFIHGWCK 249
E+ + T N+L+D C+ G V+ + ++ S C+P + T+ I+G+CK
Sbjct: 345 SEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMP-DVITYTTVINGFCK 403
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
+DEA ++ M GC P +SY+ +++ C + EL+ +M QGCPPN VT
Sbjct: 404 EGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVT 463
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM 369
+ T++++L K G E+AI + ++M + G PD ++ +I LG+A + +EA+ + V M
Sbjct: 464 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV-M 522
Query: 370 PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
G++P+T ++++ S G K + + + K + + ++ ++ S K +
Sbjct: 523 VNKGISPNTIIYSSIACALSREGRVNKVIQMFDNI-KDTTIRSDAVLYNAVISSLCKRWE 581
Query: 430 TDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
TD + MV+ + + +TYT++I GL + A L E+
Sbjct: 582 TDRAI-DFFAYMVSNGCMP-NESTYTMLIKGLASEGLAKEAQELLSEL 627
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 161/328 (49%), Gaps = 9/328 (2%)
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK--SCIPPNAH 238
+G + ++VR + + G +T NL+L+ +C++G V+ A + +L C +
Sbjct: 159 SGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGC-EADIV 217
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
++N + G C R + + + EM C P +++++T+I CR F +V+E+L +M
Sbjct: 218 SYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQM 277
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRV 358
GC P++ Y T++ + K G E A I +M G KP+ +N ++ L A R
Sbjct: 278 SEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERW 337
Query: 359 QEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH-CKPNVQTF 417
+EA + EM + D TFN ++ F +G ++ +LE+M L H C P+V T+
Sbjct: 338 KEAEELLS-EMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM--LSHGCMPDVITY 394
Query: 418 HPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
++ K G DE + LL M + + +YT+V+ GLC A + A L +M
Sbjct: 395 TTVINGFCKEGLIDEAV-MLLKSM-SSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM 452
Query: 478 IGHDITPRYQTCRLILDEVKQKHMYDAA 505
I P T +++ + +K + + A
Sbjct: 453 IQQGCPPNPVTFNTLINFLCKKGLVEQA 480
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 162/345 (46%), Gaps = 7/345 (2%)
Query: 170 TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--L 227
T V+R G+ DA+ DE+ G +++L+ C+ G + V +
Sbjct: 113 TFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM 172
Query: 228 ELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYN 287
K C + N+ ++ C+ VDEA ++++ GC ++SY+ +++ C
Sbjct: 173 HAKGCTLDTGNC-NLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKR 231
Query: 288 FSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNC 347
+ V EL+DEM C PN+VT+ T++ YL ++G FE + +M G PD R +
Sbjct: 232 WGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYAT 291
Query: 348 LIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKL 407
+I + + ++ A + MP G+ P+ +NT++ ++A +L EM +
Sbjct: 292 IIDGICKEGHLEVANEILN-RMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQ- 349
Query: 408 EHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKC 467
+ C + TF+ L+ + G D + +LL+ M++ H D+ TYT VI+G C+
Sbjct: 350 KDCPLDDVTFNILVDFFCQNGLVDRVI-ELLEQMLS-HGCMPDVITYTTVINGFCKEGLI 407
Query: 468 EWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
+ A +L K M P + ++L + + AE++ + M
Sbjct: 408 DEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM 452
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 129/272 (47%), Gaps = 6/272 (2%)
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
+PPNA+TF + G C R+ +A + EM GC P Y I+++ CR F
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
+L+ M A+GC + V++ + + G +EA+ + K+ G + D +N ++ L
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH-CK 411
A R + + EM AP+ TFNT+I +G E+ VL +M+ EH C
Sbjct: 227 CMAKRWGDVEELMD-EMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMS--EHGCT 283
Query: 412 PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAY 471
P+++ + ++ K G E +++L+ M + + L ++ Y V+ GLC A + + A
Sbjct: 284 PDIRMYATIIDGICKEGHL-EVANEILNRMPS-YGLKPNVVCYNTVLKGLCSAERWKEAE 341
Query: 472 LLFKEMIGHDITPRYQTCRLILDEVKQKHMYD 503
L EM D T +++D Q + D
Sbjct: 342 ELLSEMFQKDCPLDDVTFNILVDFFCQNGLVD 373
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 77/168 (45%), Gaps = 2/168 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
+ +++ L K ++Q LL++M G L + + V+ AG+ E+A+ + +
Sbjct: 464 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMV 523
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVD 254
G+ NT + + L +EG+V +F +K + I +A +N I CK D
Sbjct: 524 NKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETD 583
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
A M +GC P +Y+ +I+ + + ELL E+ ++G
Sbjct: 584 RAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 45/243 (18%), Positives = 89/243 (36%), Gaps = 42/243 (17%)
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
V++Y+ ++ YCR + L + PPN T+ V+ L G +A+ + +
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAVPV---PPNAYTFFPVVRGLCTRGRIADALEVLD 135
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHH 391
+M G P ++ ++ R+ + +V V + M G DT N ++
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEA-MHAKGCTLDTGNCNLVLNAICEQ 194
Query: 392 GHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDI 451
G ++A +L ++ C+ DI
Sbjct: 195 GCVDEAVGLLRKL-AFFGCEA-------------------------------------DI 216
Query: 452 TTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAV 511
+Y V+ GLC A + L EM+ D P T ++ + + +++ ++ A
Sbjct: 217 VSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQ 276
Query: 512 MKK 514
M +
Sbjct: 277 MSE 279
>gi|8778269|gb|AAF79278.1|AC068602_1 F14D16.2 [Arabidopsis thaliana]
Length = 977
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 178/364 (48%), Gaps = 18/364 (4%)
Query: 66 DIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAG 125
++ ++ + G + +E Q+L ++ Y N+++ + +D+ +ALG F W
Sbjct: 421 NVSSVLRRFRWGPAAEEALQNL-------GLRIDAYQANQVLKQM-NDYGNALGFFYWLK 472
Query: 126 SCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKG----HIVTLNTIAKVMRRFSGA 181
PG++H Y MV LG+ +Q + LL+EM + + VT N +++ + A
Sbjct: 473 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYN---RLIHSYGRA 529
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTF 240
+A+ F+++ G + + T L+D K G +++A ++ +++ + P+ T+
Sbjct: 530 NYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTY 589
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
++ I+ K + A EM GC P +++Y+ ++ + + N+ +L +MQ
Sbjct: 590 SVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQN 649
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
G P+ VTY+ VM L G EEA + +M+ PD + L+ G+A V++
Sbjct: 650 AGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEK 709
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
A YQ M G+ P+ T N++++ F +A+ +L+ M L +P++QT+ L
Sbjct: 710 AWQWYQA-MLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLAL-GLRPSLQTYTLL 767
Query: 421 LKSC 424
L C
Sbjct: 768 LSCC 771
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 154/333 (46%), Gaps = 13/333 (3%)
Query: 161 SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVE 220
+ GHIV ++ V+RRF +W A + L GL + N +L + G
Sbjct: 414 NSGHIV--ENVSSVLRRF----RWGPAAE--EALQNLGLRIDAYQANQVLKQMNDYGNA- 464
Query: 221 LARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQ 280
L +L+ + + HT+ + + + + EM GC P ++Y+ +I
Sbjct: 465 LGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIH 524
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
SY R ++ + ++MQ GC P+ VTY T++ AK+G + A+ + ++M+ G P
Sbjct: 525 SYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSP 584
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
D+ ++ +I LG+A + A ++ EM + G P+ T+N M+ + + +++ A +
Sbjct: 585 DTFTYSVIINCLGKAGHLPAAHKLF-CEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKL 643
Query: 401 LEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHG 460
+M +P+ T+ +++ G +E + +M K+ + D Y L++
Sbjct: 644 YRDMQNAGF-EPDKVTYSIVMEVLGHCGYLEEA-EAVFTEMQQKNWIP-DEPVYGLLVDL 700
Query: 461 LCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
+A E A+ ++ M+ + P TC +L
Sbjct: 701 WGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLL 733
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 81/175 (46%), Gaps = 10/175 (5%)
Query: 337 GSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEK 396
G K D + ++ LGRA + A+ EM +G P+T T+N +I + + +
Sbjct: 476 GFKHDGHTYTTMVGNLGRAKQFG-AINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNE 534
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHH---LSLDITT 453
A +V +M + CKP+ T+ L+ K G D + DM + LS D T
Sbjct: 535 AMNVFNQMQE-AGCKPDRVTYCTLIDIHAKAGFLDIAM-----DMYQRMQAGGLSPDTFT 588
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
Y+++I+ L +A A+ LF EM+ TP T +++D + Y A K+
Sbjct: 589 YSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKL 643
>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Brachypodium distachyon]
Length = 692
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 175/376 (46%), Gaps = 16/376 (4%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
+ +M+D L K + + RALL M +VT N++ + + G+ E+ +
Sbjct: 197 FNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSL---IDGYGKCGELEEVEKLVG 253
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKIN 251
E+ G + T N L++ CK G++E A S F E+K + N TF+ F+ +CK
Sbjct: 254 EMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNG 313
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
V EA +M+ G P ++Y+ ++ C+ L +EM QG P NVVTYT
Sbjct: 314 MVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYT 373
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
++ L K G EA + M+ G + + + LI+ + A+ + EM +
Sbjct: 374 VLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLS-EMKD 432
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHC--KPNVQTFHPLLKSCFKTGK 429
G+ D S + +I + ++A +L NK++ C KPN + ++ +CFK K
Sbjct: 433 KGMELDVSLYGALIWGLCNLQKLDEAKSLL---NKMDECGLKPNNVIYTNIMDACFKARK 489
Query: 430 TDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTC 489
E ++ LL M++ +I TY ++ GLC+A + A F +M+ + P Q
Sbjct: 490 ESEAIA-LLQKMMDS-GFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAY 547
Query: 490 RLILDEVKQKHMYDAA 505
++D + + D A
Sbjct: 548 TALVDGLCKNGRLDKA 563
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 139/305 (45%), Gaps = 5/305 (1%)
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHT 239
AG+ +DA+ +E+ G+ N T +L+D LCKEGKV A VF L ++ I N
Sbjct: 347 AGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELL 406
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+ IHG + A + EMK G V Y +I C + LL++M
Sbjct: 407 YTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMD 466
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
G PN V YT +M K+ EAI + +KM G +P+ + L+ L +A +
Sbjct: 467 ECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSID 526
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
EA+ + +M + G+ P+ + ++ +G +KA +L+EM NV
Sbjct: 527 EAISHFN-KMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNV-VCTS 584
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
L+ K G + + L M+N L LD+ YT + G C N + A + EMI
Sbjct: 585 LMDGHLKQGNLQDAFA-LKAKMINSG-LQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIE 642
Query: 480 HDITP 484
+ ITP
Sbjct: 643 NGITP 647
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 122/262 (46%), Gaps = 8/262 (3%)
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
+D+A + ++ P + + I+ R+ + + L +++ A PNV T+
Sbjct: 144 LDDAVLALARVRELRVPPNTRTCNHILLCLARERSSELAWRLFEQLPA----PNVFTFNI 199
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN 372
++ +L K GD EA + +MK +G PD +N LI G+ ++E + EM
Sbjct: 200 MIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVG-EMRGC 258
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
G PD T+N ++ F G E+A+ EM + E NV TF + + K G E
Sbjct: 259 GCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKR-EGVMANVVTFSTFVDAFCKNGMVRE 317
Query: 433 CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLI 492
+ +L M K + + TYT ++ G C+A + + A +L EM+ + T ++
Sbjct: 318 AM-KLFAQMRMKG-MKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVL 375
Query: 493 LDEVKQKHMYDAAEKIEAVMKK 514
+D + ++ AE + +M++
Sbjct: 376 VDGLCKEGKVAEAEDVFRLMER 397
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 116/258 (44%), Gaps = 3/258 (1%)
Query: 155 ALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTL 213
+LL EM KG + ++ ++ + ++A +++ GL+ N ++D
Sbjct: 425 SLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDAC 484
Query: 214 CKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCV 272
K K A ++ ++ S PN T+ + G CK +DEA +M G P V
Sbjct: 485 FKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNV 544
Query: 273 ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEK 332
+Y+ ++ C+ K LLDEM +G + V T++M K G+ ++A + K
Sbjct: 545 QAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAK 604
Query: 333 MKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
M G + D + C ++ + +QEA V EM ENG+ PD +N +I G
Sbjct: 605 MINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLS-EMIENGITPDAVVYNCLINKCQKLG 663
Query: 393 HHEKAFHVLEEMNKLEHC 410
+ E+A + EM L C
Sbjct: 664 NMEEAAILQNEMESLLSC 681
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 131/545 (24%), Positives = 241/545 (44%), Gaps = 62/545 (11%)
Query: 11 QARIPLNPLTSRIRFHSSSENCSHIVSSSPIESYCSDGARLDHHQVLCVDSPRLPDIDVI 70
R +NP T+ F+ +S++C + + SYC L V RL I +I
Sbjct: 85 SVRRNVNPKTALNFFYFASDSCGFRFT---LRSYCVLMRSLIVSGF--VSPARLLLIRLI 139
Query: 71 ISKVHV--GSSED---EVFQSLKQDHVCNAIQPSHYLVNKLIH----RFKD-DWKSALGI 120
K+ V G ++ E+ ++ + + V+ LIH +F++ +++A+G+
Sbjct: 140 DRKLPVLFGDPKNRHIEIASAMADLNEVGESGVAVAAVDLLIHVYCTQFRNVGFRNAIGV 199
Query: 121 FRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSG 180
FR+ + G + + ++ L K ++++ + E M +G + + + F
Sbjct: 200 FRFLAN-KGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQGVSPDVYLFSTAINAFCK 258
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEG----------------------- 217
G+ EDA++ F ++ G+ N T N L+ LCK G
Sbjct: 259 GGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLIT 318
Query: 218 ------------KVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
K A SV E L+ PN +N I G+CK+ + +A +M
Sbjct: 319 YSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMV 378
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
G +P ++ ++IIQ +C+ + +L+EM ++G N +TT++ +L + FE
Sbjct: 379 SKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFE 438
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTM 384
A+R +M + +P+ L+ L + + +AV ++ + E G + T N +
Sbjct: 439 SALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELW-FRLLEKGFGANLVTTNAL 497
Query: 385 ITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK 444
I G+ ++A +L++M + + T++ L+ C K GK +E +L +MV K
Sbjct: 498 IHGLCKTGNMQEAVRLLKKMLERGFVLDKI-TYNTLISGCCKEGKVEEGF-KLRGEMV-K 554
Query: 445 HHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDA 504
+ D TY L+IHG+CR K + A L+ E D+ P T +++D Y
Sbjct: 555 QGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDG------YCK 608
Query: 505 AEKIE 509
A+KIE
Sbjct: 609 ADKIE 613
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 166/319 (52%), Gaps = 6/319 (1%)
Query: 144 LGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKN 202
L K M + LL++M +G ++ T ++ G+ E+ + E+ G+E +
Sbjct: 501 LCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPD 560
Query: 203 TETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQ 261
T T NLL+ +C+ GK++ A +++ E KS + PN +T+ + I G+CK ++++E +
Sbjct: 561 TFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFT 620
Query: 262 EMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSG 321
E+ + Y+T+I++YCR N + ++L D+M+++G PP TY++++ + G
Sbjct: 621 ELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIG 680
Query: 322 DFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTF 381
E+A + ++M+ G P+ + LI + ++ + V V Q EM + P+ T+
Sbjct: 681 RMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQ-EMSSYDIHPNKITY 739
Query: 382 NTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDM 441
MI +S G + A +L EM + P+ T++ L K GK +E + D
Sbjct: 740 TVMIDGYSKSGDMKTAAKLLHEMVG-KGIVPDTVTYNVLTNGFCKEGKIEEGFK--ICDY 796
Query: 442 VNKHHLSLDITTYTLVIHG 460
+++ L LD TYT ++HG
Sbjct: 797 MSQEGLPLDEITYTTLVHG 815
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 154/322 (47%), Gaps = 5/322 (1%)
Query: 151 DQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLL 210
D + + KG L T ++ G ++AVR ++ G + T N L+
Sbjct: 474 DAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLI 533
Query: 211 DTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCH 269
CKEGKVE + E+ K I P+ T+N+ IHG C+I ++DEA E K
Sbjct: 534 SGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLV 593
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI 329
P V +Y +I YC+ + +L E+ Q N V Y T++ ++G+ EA ++
Sbjct: 594 PNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKL 653
Query: 330 TEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFS 389
+ M+ G P + ++ LI+ + R+++A + EM + G+ P+ + +I +
Sbjct: 654 HDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLID-EMRKEGLLPNVVCYTALIGGYC 712
Query: 390 HHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSL 449
G +K +VL+EM+ + PN T+ ++ K+G + ++LL +MV K +
Sbjct: 713 KLGQMDKVVNVLQEMSSYD-IHPNKITYTVMIDGYSKSGDM-KTAAKLLHEMVGKGIVP- 769
Query: 450 DITTYTLVIHGLCRANKCEWAY 471
D TY ++ +G C+ K E +
Sbjct: 770 DTVTYNVLTNGFCKEGKIEEGF 791
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 102/435 (23%), Positives = 199/435 (45%), Gaps = 10/435 (2%)
Query: 85 QSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVD 142
S+ ++ + P+ + N LI + + AL I R G +S ++
Sbjct: 336 NSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRI-RGDMVSKGINPNSVTLNSIIQ 394
Query: 143 ILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEK 201
K+ QM+Q +LEEM S+G + ++ ++E A+R E+ +
Sbjct: 395 GFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRP 454
Query: 202 NTETMNLLLDTLCKEGKVELARSV-FLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTI 260
N + L+ LCKEGK A + F L+ N T N IHG CK + EA +
Sbjct: 455 NDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLL 514
Query: 261 QEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKS 320
++M G I+Y+T+I C++ + ++L EM QG P+ TY ++ + +
Sbjct: 515 KKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRI 574
Query: 321 GDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTST 380
G +EA+ + + K P+ + +I +A +++E ++ + +N + ++
Sbjct: 575 GKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQN-LELNSVV 633
Query: 381 FNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDD 440
+NT+I + +G+ +AF + ++M + + P T+ L+ G+ ++ ++ L D
Sbjct: 634 YNTLIRAYCRNGNTVEAFKLHDDM-RSKGIPPTTATYSSLIHGMCNIGRMED--AKCLID 690
Query: 441 MVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQK 499
+ K L ++ YT +I G C+ + + + +EM +DI P T +++D K
Sbjct: 691 EMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSG 750
Query: 500 HMYDAAEKIEAVMKK 514
M AA+ + ++ K
Sbjct: 751 DMKTAAKLLHEMVGK 765
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 130/259 (50%), Gaps = 3/259 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEE-MSKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G E + Y +++ + ++ ++D+ L E S+ + + T ++ + A + E+
Sbjct: 556 GIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEG 615
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHG 246
+ F EL T LE N+ N L+ C+ G A + +++S IPP T++ IHG
Sbjct: 616 EKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHG 675
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C I R+++A+ I EM+ G P V+ Y+ +I YC+ KV +L EM + PN
Sbjct: 676 MCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPN 735
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
+TYT ++ +KSGD + A ++ +M G PD+ +N L + +++E +
Sbjct: 736 KITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICD 795
Query: 367 VEMPENGVAPDTSTFNTMI 385
M + G+ D T+ T++
Sbjct: 796 Y-MSQEGLPLDEITYTTLV 813
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 126/269 (46%), Gaps = 7/269 (2%)
Query: 87 LKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYE--MMVDIL 144
L+ + V I+P + N LIH K + W C + +Y +M+D
Sbjct: 548 LRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLW-NECKSRDLVPNVYTYGVMIDGY 606
Query: 145 GKVRQMDQMRALLEEMSKGHIVTLNTIA--KVMRRFSGAGQWEDAVRTFDELGTFGLEKN 202
K ++++ L E+ ++ LN++ ++R + G +A + D++ + G+
Sbjct: 607 CKADKIEEGEKLFTELLTQNL-ELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPT 665
Query: 203 TETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQ 261
T T + L+ +C G++E A+ + E+ K + PN + I G+CK+ ++D+ +Q
Sbjct: 666 TATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQ 725
Query: 262 EMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSG 321
EM + HP I+Y+ +I Y + + +LL EM +G P+ VTY + + K G
Sbjct: 726 EMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEG 785
Query: 322 DFEEAIRITEKMKIVGSKPDSRFFNCLIY 350
EE +I + M G D + L++
Sbjct: 786 KIEEGFKICDYMSQEGLPLDEITYTTLVH 814
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/156 (20%), Positives = 73/156 (46%), Gaps = 2/156 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
G ++ Y ++ + + +M+ + L++EM K G + + ++ + GQ +
Sbjct: 661 GIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKV 720
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHG 246
V E+ ++ + N T +++D K G ++ A + E+ I P+ T+N+ +G
Sbjct: 721 VNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNG 780
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSY 282
+CK +++E M G I+Y+T++ +
Sbjct: 781 FCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHGW 816
>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Brachypodium distachyon]
Length = 787
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 122/519 (23%), Positives = 228/519 (43%), Gaps = 42/519 (8%)
Query: 14 IPLNPLTSRIRFHSSSENCSHIVSSSPIESYCSDGARLDHHQVLCVDS--------PRLP 65
+PL+PL S R H S ++ + + +Y RL H + S P L
Sbjct: 112 VPLDPLRSLHR-HLLGNLPSTPLADAALSAYSR--LRLPHLAAQLLHSLRRRVRVRPSLQ 168
Query: 66 DIDVIISKVHVGSSED-----EVFQSLKQDHVCNAIQPSHYLVNKLIHR-----FKDDWK 115
+ ++S + S + F+S+ V + P+HY N L+H D
Sbjct: 169 AANAVLSALARSPSTSPQASLDAFRSI----VALRLHPNHYTFNLLVHTHCSKGTLADAL 224
Query: 116 SALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIV----TLNTI 171
S L + G P + Y +++ + + + RALL M K + T NT+
Sbjct: 225 STLSTMQGFGLSP----DAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTL 280
Query: 172 AKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK- 230
R G + A + + + G E + T N+L LC+ GKV+ A + E++
Sbjct: 281 VSAYARL---GWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMER 337
Query: 231 -SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFS 289
+ P+ T+N K +A ++EM+ G +++++ +I+ C+
Sbjct: 338 LGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELE 397
Query: 290 KVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
L++M G P+V+TY T++ K+G+ +A + ++M G K D+ N ++
Sbjct: 398 GALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVL 457
Query: 350 YTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH 409
Y L + R +EA + Q P+ G PD ++ T++ + + E A + +EM + +
Sbjct: 458 YNLCKEKRYEEAQGLLQSP-PQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIE-KK 515
Query: 410 CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEW 469
P++ T++ L+K + G+ E + +L + M + L D TTY ++IH C+ E
Sbjct: 516 LTPSISTYNTLIKGLSRMGRLKEAIDKLNELM--EKGLVPDDTTYNIIIHAYCKEGDLEN 573
Query: 470 AYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
A+ +M+ + P TC +++ + D A K+
Sbjct: 574 AFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKL 612
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/422 (24%), Positives = 194/422 (45%), Gaps = 14/422 (3%)
Query: 94 NAIQPSHYLVNKLIHRF-KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQ 152
+ + P+ N L+ + + W A + G+E Y ++ L + ++D+
Sbjct: 268 DGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDE 327
Query: 153 MRALLEEMSK-----GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN 207
L +EM + +VT NT+A + + DA+R +E+ G++ T N
Sbjct: 328 AFRLKDEMERLGTLLPDVVTYNTLADACFKCRCS---SDALRLLEEMREKGVKATLVTHN 384
Query: 208 LLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
+++ LCK+G++E A ++ + P+ T+N IH CK + +A + EM
Sbjct: 385 IVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRR 444
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
G + +T++ + C++ + + LL +G P+ V+Y TVM+ K + E A
Sbjct: 445 GLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPA 504
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
+R+ ++M P +N LI L R R++EA+ E+ E G+ PD +T+N +I
Sbjct: 505 LRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLN-ELMEKGLVPDDTTYNIIIH 563
Query: 387 MFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHH 446
+ G E AF +M + KP+V T + L+ GK D+ L +L + V K
Sbjct: 564 AYCKEGDLENAFQFHNKMVE-NSFKPDVVTCNTLMNGLCLNGKLDKAL-KLFESWVEKGK 621
Query: 447 LSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAE 506
+D+ TY +I +C+ + A F +M + P T ++L + + + A+
Sbjct: 622 -KVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQ 680
Query: 507 KI 508
+
Sbjct: 681 NM 682
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 101/411 (24%), Positives = 170/411 (41%), Gaps = 70/411 (17%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y + D K R LLEEM KG TL T V++ G+ E A+ +++
Sbjct: 348 YNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMA 407
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
GL + T N L+ CK G + A ++ E+ + + + T N ++ CK R +
Sbjct: 408 DDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYE 467
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EAQ +Q G P +SY T++ +Y ++YN L DEM + P++ TY T++
Sbjct: 468 EAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLI 527
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
L++ G +EAI ++ G PD +N +I+ + ++ A + + +M EN
Sbjct: 528 KGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENA-FQFHNKMVENSF 586
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEE------------MNKL--EHCK--------- 411
PD T NT++ +G +KA + E N L CK
Sbjct: 587 KPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALH 646
Query: 412 -----------PNVQTFHPLLKSCFKTGKTDEC------------LSQ------LLDDMV 442
P+ T++ +L + + G+T+E LSQ L V
Sbjct: 647 FFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLLKPSSV 706
Query: 443 NKHHLSLDITT---------------YTLVIHGLCRANKCEWAYLLFKEMI 478
++ D T YT +++GLC + + + A + EM+
Sbjct: 707 DEAESGKDAKTEEETVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMM 757
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 95/209 (45%), Gaps = 5/209 (2%)
Query: 156 LLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK 215
++E K +VT NT+ M G+ + A++ F+ G + + T N L+ T+CK
Sbjct: 581 MVENSFKPDVVTCNTL---MNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCK 637
Query: 216 EGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVIS 274
+G V+ A F ++++ + P+A T+N+ + + R +EAQ + ++ G S
Sbjct: 638 DGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFS 697
Query: 275 YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
+ S + K + +E YT +++ L SG F+EA I ++M
Sbjct: 698 SPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMM 757
Query: 335 IVGSKPDSRFFNCLIYTL-GRASRVQEAV 362
G DS + L+ L R R+ AV
Sbjct: 758 QKGMSVDSSTYITLMEGLVKRQKRLTHAV 786
>gi|224129154|ref|XP_002320514.1| predicted protein [Populus trichocarpa]
gi|222861287|gb|EEE98829.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 108/437 (24%), Positives = 199/437 (45%), Gaps = 25/437 (5%)
Query: 63 RLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFR 122
R+ I + I K HV S E F SLK + + +H ++ ++ + K +KSA I R
Sbjct: 44 RVNHILLKIQKDHVLSLE--FFNSLKTLNPISLTLETHSIILHILTK-KSKFKSAQSILR 100
Query: 123 WAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAG 182
+ + ++++ + L R D + + + + ++
Sbjct: 101 TLLASRSIDLPGKLFDTL---LFSYRMCDSSPRVFDSL--------------FKTYAHMN 143
Query: 183 QWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFN 241
++ +A F + +G E+ N L +L +V++A + + E++ C I PN++TFN
Sbjct: 144 KFRNATDVFSRMKDYGFLPTVESCNAYLSSLLDFHRVDIALTFYREMRRCRISPNSYTFN 203
Query: 242 IFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ 301
+ + CK ++++A ++EM+ G P V+SY+T+I +C + S +L + M
Sbjct: 204 LVLSALCKSGKLEKAVEVLREMESVGITPNVVSYNTLIAGHCNKGLLSIATKLKNLMGKN 263
Query: 302 GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
G PNVVT+ +++ K G EA R +MK++ P++ +N LI G+ A
Sbjct: 264 GLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNVTPNTVTYNTLINGYGQVGNSNMA 323
Query: 362 VYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLL 421
VY+ EM NGV D T+N +I G +KA +++E++K E+ PN T+ L+
Sbjct: 324 GKVYE-EMMRNGVKADILTYNALILGLCKEGKTKKAAFLVKELDK-ENLVPNASTYSALI 381
Query: 422 KSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHD 481
+D QL MV + + T+ ++ + E A+ + +M
Sbjct: 382 SGQCARKNSDRAF-QLYKSMV-RSGCHPNEQTFKMLTSAFVKNEDFEGAFNVLMDMFARS 439
Query: 482 ITPRYQTCRLILDEVKQ 498
+ T I D + Q
Sbjct: 440 MASDSNTLLEIYDGLCQ 456
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 5/212 (2%)
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
C + + ++ A F A + +MK G P N + +L RV A+
Sbjct: 125 CDSSPRVFDSLFKTYAHMNKFRNATDVFSRMKDYGFLPTVESCNAYLSSLLDFHRVDIAL 184
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLK 422
Y+ EM ++P++ TFN +++ G EKA VL EM + PNV +++ L+
Sbjct: 185 TFYR-EMRRCRISPNSYTFNLVLSALCKSGKLEKAVEVLREMESVG-ITPNVVSYNTLIA 242
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
G ++ L +++ K+ L ++ T+ +IHG C+ K A F EM ++
Sbjct: 243 GHCNKGLLS--IATKLKNLMGKNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNV 300
Query: 483 TPRYQTCRLILDEVKQKHMYDAAEKI-EAVMK 513
TP T +++ Q + A K+ E +M+
Sbjct: 301 TPNTVTYNTLINGYGQVGNSNMAGKVYEEMMR 332
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 92/193 (47%), Gaps = 7/193 (3%)
Query: 145 GKVRQMDQMRALLEEMSKGHIVTLNTIA--KVMRRFSGAGQWEDAVRTFDELGTFGLEKN 202
GK+ + ++ + ++ M+ VT NT+ ++ + G A + ++E+ G++ +
Sbjct: 283 GKLHEANRFFSEMKVMN----VTPNTVTYNTLINGYGQVGNSNMAGKVYEEMMRNGVKAD 338
Query: 203 TETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQ 261
T N L+ LCKEGK + A + EL K + PNA T++ I G C D A +
Sbjct: 339 ILTYNALILGLCKEGKTKKAAFLVKELDKENLVPNASTYSALISGQCARKNSDRAFQLYK 398
Query: 262 EMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSG 321
M GCHP ++ + ++ + +F + +L +M A+ + T + L + G
Sbjct: 399 SMVRSGCHPNEQTFKMLTSAFVKNEDFEGAFNVLMDMFARSMASDSNTLLEIYDGLCQCG 458
Query: 322 DFEEAIRITEKMK 334
A+++ +M+
Sbjct: 459 KENLAMKLCHEME 471
>gi|343887304|dbj|BAK61850.1| PPR containing protein [Citrus unshiu]
Length = 567
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 98/423 (23%), Positives = 199/423 (47%), Gaps = 17/423 (4%)
Query: 94 NAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEM--MVDILGKVRQMD 151
N+ + S + ++KLI + D IF W E+ + +Y ++ +L +V +
Sbjct: 117 NSNKLSDFFISKLIKAYGDRGNVKAAIF-WFHQAKQIENGACLYSYNSLLGVLVRVNSIK 175
Query: 152 QMRALLEEMSKGHIVT--LNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLL 209
++ K ++V ++T ++R + G E+A + FD ++ N N +
Sbjct: 176 LAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD---VMTVKPNLLAYNTM 232
Query: 210 LDTLCKEGKVELARSVFLELKS---CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
++ CK+G +E AR VF + S C+P N T+ I G+CK ++EA+ + EM
Sbjct: 233 INGFCKKGDMESARLVFDRMMSGEDCLP-NHVTYTTLIDGYCKKGELEEAKKCMNEMMNR 291
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
GC P ++Y+ +I C + L+ +M+ G NV T+ +++ L G F++A
Sbjct: 292 GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQA 351
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
+ + PD + + +I + + EA+ + + EM G+ P +FN +
Sbjct: 352 VGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLK-EMRARGLKPTVFSFNAVFR 410
Query: 387 MFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS-CFKTGKTDECLSQLLDDMVNKH 445
+ +G ++A +L++M +++ C PN +++ ++ C G+ + + L+D M+
Sbjct: 411 ILVENGELDRAILLLKQMPQMD-CLPNFVSYNTIICGLCMAKGRMQD-VEDLVDRMIRSG 468
Query: 446 HLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
H +LD T Y+ ++ G C E + EM+ ++ +++ ++ K A
Sbjct: 469 H-NLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKYVIGLESFSVLVKQLCAKGKVTEA 527
Query: 506 EKI 508
EK+
Sbjct: 528 EKL 530
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 103/420 (24%), Positives = 197/420 (46%), Gaps = 25/420 (5%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPG-----YEHSSEIYEMMVDILGKVRQMDQMRAL 156
+V K+I+ + + AL F WA S P Y H++ Y + D+L + +L
Sbjct: 57 IVTKVIYEQTNPYH-ALFFFNWA-SNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASL 114
Query: 157 LEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKE 216
L+ +K ++ I+K+++ + G + A+ F + + N LL L +
Sbjct: 115 LKNSNK---LSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
Query: 217 GKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVIS 274
++LA F ++ ++ +PP+ T+ I G+CK+ ++ A+ M P +++
Sbjct: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLA 228
Query: 275 YSTIIQSYCRQYNFSKVYELLDE-MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
Y+T+I +C++ + + D M + C PN VTYTT++ K G+ EEA + +M
Sbjct: 229 YNTMINGFCKKGDMESARLVFDRMMSGEDCLPNHVTYTTLIDGYCKKGELEEAKKCMNEM 288
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
G +P+ +N +IY L RV EA + +M NG + ST +M+ G
Sbjct: 289 MNRGCRPNELTYNAMIYGLCINGRVDEA-KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGK 347
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
++A L + + + P+V+++ ++ K GK+DE +S LL +M L + +
Sbjct: 348 FDQAVGYLRNVME-ANMNPDVKSYEVVINGFCKIGKSDEAIS-LLKEM-RARGLKPTVFS 404
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT-----CRLILDEVKQKHMYDAAEKI 508
+ V L + + A LL K+M D P + + C L + + + + + D +++
Sbjct: 405 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 464
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 73/169 (43%), Gaps = 5/169 (2%)
Query: 345 FNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
+N L+ L R + ++ A + + EN V PD ST+ TMI + G E A V + M
Sbjct: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Query: 405 NKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRA 464
KPN+ ++ ++ K G E + D M++ + TYT +I G C+
Sbjct: 221 T----VKPNLLAYNTMINGFCKKGDM-ESARLVFDRMMSGEDCLPNHVTYTTLIDGYCKK 275
Query: 465 NKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
+ E A EM+ P T ++ + D A+ + A M+
Sbjct: 276 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 324
>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
Length = 667
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 147/294 (50%), Gaps = 7/294 (2%)
Query: 191 FDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKI 250
FD++ G ++ + L++ LC+ G+++ A +F E+ P+ H + + G C
Sbjct: 33 FDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQ---PDMHMYAALVKGLCNA 89
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
R +E ++ MK G P +Y+ ++ CR+ + E+L EM +G P VVT
Sbjct: 90 ERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTC 149
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
T V++ K G +A+R+ E MK+ G KP+ +N L+ +V +A+ + +M
Sbjct: 150 TAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLN-KMR 208
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKT 430
GV PD T+N +I GH E AF +L M + + T++ L+ + K G+T
Sbjct: 209 ACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEG-DGLIADQYTYNALINALCKDGRT 267
Query: 431 DECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
D+ S L D + + + T+ +I+GLC++ K + A+ ++M+ TP
Sbjct: 268 DQACS--LFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTP 319
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 173/367 (47%), Gaps = 6/367 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G+ S+ Y +VD + R+ + +L+EM KG + T V+ + G+ DA
Sbjct: 106 GWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDA 165
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHG 246
+R + + G + N T N L+ C EGKV A ++ ++++C + P+A T+N+ I G
Sbjct: 166 LRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRG 225
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C ++ A ++ M+G G +Y+ +I + C+ + L D ++ +G PN
Sbjct: 226 QCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPN 285
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
VT+ ++++ L KSG + A + EKM G PD+ ++ I L + QE + +
Sbjct: 286 AVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLS-FI 344
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
EM + V P T + +I ++ EM C P+V T+ +++
Sbjct: 345 GEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVS-SGCNPDVVTYTTSMRAYCI 403
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
G+ +E + L++ ++K+ +++D Y ++ G + + A + K+M P
Sbjct: 404 EGRLNEAENVLME--MSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQ 461
Query: 487 QTCRLIL 493
T ++L
Sbjct: 462 FTYFILL 468
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 135/277 (48%), Gaps = 8/277 (2%)
Query: 229 LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
++S P+A+TFN I G+C+ N+VD A+ +M G V+SY+T+I+ C
Sbjct: 2 VRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRI 61
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
+ EL EM P++ Y ++ L + EE + + +MK +G +P +R + +
Sbjct: 62 DEAVELFGEMDQ----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAV 117
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
+ R + +EA + Q EM E G+AP T +I + G A VLE M KL
Sbjct: 118 VDFRCRERKAKEAEEMLQ-EMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELM-KLR 175
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
CKPNV T++ L++ GK + ++ LL+ M ++ D TY L+I G C E
Sbjct: 176 GCKPNVWTYNALVQGFCNEGKVHKAMT-LLNKM-RACGVNPDAVTYNLLIRGQCIDGHIE 233
Query: 469 WAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
A+ L + M G + T +++ + + D A
Sbjct: 234 SAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQA 270
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 105/436 (24%), Positives = 189/436 (43%), Gaps = 32/436 (7%)
Query: 97 QPSHYLVNKLIHRFKDDWK--SALGIFRWAGSCPGYEHSSEIYEMMVD---ILGKVRQMD 151
+P+ + N L+ F ++ K A+ + +C G + Y +++ I G +
Sbjct: 178 KPNVWTYNALVQGFCNEGKVHKAMTLLNKMRAC-GVNPDAVTYNLLIRGQCIDGHIESAF 236
Query: 152 QMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLD 211
++ L+E G I T ++ G+ + A FD L T G++ N T N L++
Sbjct: 237 RLLRLME--GDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLIN 294
Query: 212 TLCKEGKVELARSVFLE--LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCH 269
LCK GK ++A FLE + + P+ +T++ FI CK+ E I EM
Sbjct: 295 GLCKSGKADIAWK-FLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVK 353
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI 329
P ++Y+ +I ++ N+ V EM + GC P+VVTYTT M G EA +
Sbjct: 354 PSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENV 413
Query: 330 TEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFS 389
+M G D+ +N L+ + AV + + +M P+ T+ ++
Sbjct: 414 LMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILK-QMTSVASVPNQFTYFILLRHLV 472
Query: 390 HHGHHEKA-----------------FHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
E F + + M K E PN T+ +L+ + G+T+E
Sbjct: 473 RMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFL-PNSGTYSSILEGFSEDGRTEE 531
Query: 433 CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLI 492
S L ++ + +SL+ YT ++ C++ + A++L MI H P+ + + +
Sbjct: 532 ATS--LVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHL 589
Query: 493 LDEVKQKHMYDAAEKI 508
L + + D A++I
Sbjct: 590 LSGLICEGQTDKAKEI 605
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 72/376 (19%), Positives = 143/376 (38%), Gaps = 40/376 (10%)
Query: 83 VFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRW--------AGSCPGYEHSS 134
+F SL+ I+P+ N LI+ KS W AG P S
Sbjct: 273 LFDSLET----RGIKPNAVTFNSLINGL---CKSGKADIAWKFLEKMVSAGCTPDTYTYS 325
Query: 135 EIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
E + + G + + +L++ K V + + + G RT+ E+
Sbjct: 326 SFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGL---VARTWGEM 382
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRV 253
+ G + T + C EG++ A +V +E+ K+ + + +N + G I +
Sbjct: 383 VSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQT 442
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQ-----------------YNFSKVYELLD 296
D A +++M P +Y +++ R + V+ L D
Sbjct: 443 DHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFD 502
Query: 297 EMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRAS 356
M+ PN TY++++ ++ G EEA + MK + + L+ ++
Sbjct: 503 VMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSK 562
Query: 357 RVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMN-KLEHCKPNVQ 415
R +A +V M ++G P ++ +++ G +KA + MN + + P+
Sbjct: 563 RYLDA-WVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIF--MNSRWKDYSPDEI 619
Query: 416 TFHPLLKSCFKTGKTD 431
+ ++ K G +D
Sbjct: 620 VWKVIIDGLIKKGHSD 635
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 93/221 (42%), Gaps = 26/221 (11%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK--------------GHIVTLNTIAKVMRRFSGAG 182
Y ++D + Q D ++L++M+ H+V + + V+ + AG
Sbjct: 429 YNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLP-LTPAG 487
Query: 183 QWEDAVRTFDELGTFGLEK------NTETMNLLLDTLCKEGKVELARS-VFLELKSCIPP 235
W+ A+ D G F + K N+ T + +L+ ++G+ E A S V L + I
Sbjct: 488 VWK-AIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISL 546
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
N + + +CK R +A + M HG P ++SY ++ + K E+
Sbjct: 547 NEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIF 606
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFE---EAIRITEKM 333
+ + P+ + + ++ L K G + E I + E+M
Sbjct: 607 MNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERM 647
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 67/147 (45%), Gaps = 8/147 (5%)
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M +G PD TFN++I + + A + ++M L +V ++ L++ + G
Sbjct: 1 MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM-PLRGFAQDVVSYATLIEGLCEAG 59
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ DE + +L +M D+ Y ++ GLC A + E L+ + M P +
Sbjct: 60 RIDEAV-ELFGEMDQP-----DMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRA 113
Query: 489 CRLILD-EVKQKHMYDAAEKIEAVMKK 514
++D +++ +A E ++ + +K
Sbjct: 114 YAAVVDFRCRERKAKEAEEMLQEMFEK 140
>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
Length = 701
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 115/470 (24%), Positives = 210/470 (44%), Gaps = 63/470 (13%)
Query: 83 VFQSLKQDHVCN-AIQPSHYLVNKLIHRFKDDWKSA---LGIFRWAGSCPGYEHSSEIYE 138
+FQ++ CN I+ + ++N I + W+ A F+ AG P + Y
Sbjct: 100 LFQNMVDIFGCNPGIRSFNSMLNAFIE--SNQWREAELFFTYFQTAGMSPNLQ----TYN 153
Query: 139 MMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTF 197
+++ I K RQ ++ + LL M G + + ++ + +G DAV FDE+
Sbjct: 154 ILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVR 213
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVDE 255
G+ + N+L+D ++G A ++ L +S + P+ T+NI I+G CK+ ++DE
Sbjct: 214 GVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDE 273
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
+ MK + P + ++S++I + NF+ ++ EM G P+V TY ++S
Sbjct: 274 SMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLS 333
Query: 316 YLAKSGDFEEAIRITEKM------KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM 369
L ++G + + M IV +N LI L +V++A+ +Q+ +
Sbjct: 334 GLFRTGKLNKCFELWNVMSKNNCCNIVS-------YNMLIQGLLDNKKVEQAICYWQL-L 385
Query: 370 PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNK----------------------L 407
E G+ D++T+ +I +G+ KA +LEE L
Sbjct: 386 HERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGML 445
Query: 408 EHC------------KPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYT 455
E K N F+ L+ + K +E +S +L +M +K + + +Y
Sbjct: 446 EQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAIS-VLREMKSK-DCAPTVVSYN 503
Query: 456 LVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
+I+GLC+A + AYL KEM+ + P T L++D + + D A
Sbjct: 504 TIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMA 553
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 109/420 (25%), Positives = 192/420 (45%), Gaps = 12/420 (2%)
Query: 95 AIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQ 152
+ P N LI F K D+ A I++ + S E Y +M++ L K+ ++D+
Sbjct: 214 GVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDE 273
Query: 153 MRALLEEMSKGHIVT-LNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLD 211
+ M K L T + ++ S AG + A + F E+ GL + T N +L
Sbjct: 274 SMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLS 333
Query: 212 TLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPC 271
L + GK+ ++ + N ++N+ I G +V++A Q + G
Sbjct: 334 GLFRTGKLNKCFELWNVMSKNNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKAD 393
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
+Y +I C+ +K +L+E + +G + Y++++ L K G E+A+ +
Sbjct: 394 STTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIH 453
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHH 391
+MK K +S FN LI RA +++EA+ V + EM AP ++NT+I
Sbjct: 454 QMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLR-EMKSKDCAPTVVSYNTIINGLCKA 512
Query: 392 GHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDI 451
A+ L+EM + E KP++ T+ L+ + K D L+ L +NK L D+
Sbjct: 513 ERFSDAYLSLKEMLE-EGLKPDMITYSLLIDGLCRGEKVDMALN-LWHQCINKR-LKPDL 569
Query: 452 TTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAV 511
+ ++IHGLC A K + A +F +M + P T I++ +Y A + +EA+
Sbjct: 570 QMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIME-----GLYKAGDCVEAL 624
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 130/263 (49%), Gaps = 8/263 (3%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPP-NAHTF 240
G A+R +E G + +T + ++ LCK+G +E A + ++K N+H F
Sbjct: 408 GYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVF 467
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
N I+G+ + +++EA ++EMK C P V+SY+TII C+ FS Y L EM
Sbjct: 468 NSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLE 527
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
+G P+++TY+ ++ L + + A+ + + KPD + N +I+ L A +V
Sbjct: 528 EGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDV 587
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH-CKPNVQTFHP 419
A+ ++ +M + PD T NT++ G +A + + + LE +P++ +++
Sbjct: 588 ALEIF-TQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRI--LEAGLQPDIISYNI 644
Query: 420 LLK---SCFKTGKTDECLSQLLD 439
K SC + E L LD
Sbjct: 645 TFKGLCSCARVSDAIEFLYDALD 667
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 108/219 (49%), Gaps = 2/219 (0%)
Query: 133 SSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTF 191
+S ++ +++ + ++++ ++L EM SK T+ + ++ A ++ DA +
Sbjct: 463 NSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSL 522
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKI 250
E+ GL+ + T +LL+D LC+ KV++A +++ + + + P+ NI IHG C
Sbjct: 523 KEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTA 582
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
+VD A +M+ C P +++++TI++ + + + ++ D + G P++++Y
Sbjct: 583 QKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISY 642
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
L +AI G P++ +N L+
Sbjct: 643 NITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLV 681
>gi|297848576|ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338011|gb|EFH68428.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 662
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 104/413 (25%), Positives = 192/413 (46%), Gaps = 40/413 (9%)
Query: 117 ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVM 175
A F W+ Y H+ E Y +VD+L + +D++R + E+ K +T++ ++
Sbjct: 135 AWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFICSEIRKFEFPMTVSPGNSLI 194
Query: 176 RRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IP 234
+ F G E+ + + ++ G+E T N L++ L V+ A VF ++S I
Sbjct: 195 KSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIK 254
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQS------------- 281
P+ T+N I G+CK + +A ++ M+ G I+Y T+IQ+
Sbjct: 255 PDVVTYNTMIKGYCKAGQTQKALEKLRVMETKGLEADKITYMTMIQACYADSDFSSCVAL 314
Query: 282 ----------------------YCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK 319
C++ ++ Y + + M +G PNV YT ++ AK
Sbjct: 315 YQEMDEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 374
Query: 320 SGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTS 379
+G E+AIR+ +M G PD ++ ++ L + RV+EA+ +Q NG+A ++
Sbjct: 375 TGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQT-CRFNGLAINSM 433
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLD 439
++++I G ++A + EEM++ + C + ++ L+ + K GK DE L+ L
Sbjct: 434 FYSSLIDGLGKAGRVDEAERLFEEMSE-KGCTRDSYCYNALIDAFTKHGKVDEALA-LFK 491
Query: 440 DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLI 492
M + + TYT++I G+ + ++ E A L+ MI ITP R +
Sbjct: 492 RMEEEEGCDQTVYTYTILISGMFKEHRNEEALKLWDMMIDKGITPTAACLRAL 544
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 167/356 (46%), Gaps = 15/356 (4%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQW 184
G E + Y +++ L +D + E M G I VT NT+ K + AGQ
Sbjct: 217 GIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDVVTYNTMIK---GYCKAGQT 273
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC---IPPNAHTFN 241
+ A+ + T GLE + T ++ + +++ E+ +PP H F+
Sbjct: 274 QKALEKLRVMETKGLEADKITYMTMIQACYADSDFSSCVALYQEMDEKGLQVPP--HAFS 331
Query: 242 IFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ 301
+ I G CK +++E + M G P V Y+ +I Y + + LL M +
Sbjct: 332 LVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDE 391
Query: 302 GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
G P+VVTY+ V++ L K+G EEA+ + + G +S F++ LI LG+A RV EA
Sbjct: 392 GFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDEA 451
Query: 362 VYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLL 421
+++ EM E G D+ +N +I F+ HG ++A + + M + E C V T+ L+
Sbjct: 452 ERLFE-EMSEKGCTRDSYCYNALIDAFTKHGKVDEALALFKRMEEEEGCDQTVYTYTILI 510
Query: 422 KSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
FK + +E L +L D M++K ++ + GLC + K A + E+
Sbjct: 511 SGMFKEHRNEEAL-KLWDMMIDK-GITPTAACLRALSTGLCLSGKVARACKILDEL 564
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 137/308 (44%), Gaps = 5/308 (1%)
Query: 202 NTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTI 260
N E L+D L V+ R + E++ P N I + K+ V+E W
Sbjct: 151 NLECYVSLVDVLALAKDVDRIRFICSEIRKFEFPMTVSPGNSLIKSFGKLGMVEELLWVW 210
Query: 261 QEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKS 320
++MK +G P + +Y+ ++ + + M++ P+VVTY T++ K+
Sbjct: 211 RKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDVVTYNTMIKGYCKA 270
Query: 321 GDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTST 380
G ++A+ M+ G + D + +I S V +YQ EM E G+
Sbjct: 271 GQTQKALEKLRVMETKGLEADKITYMTMIQACYADSDFSSCVALYQ-EMDEKGLQVPPHA 329
Query: 381 FNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDD 440
F+ +I G + + V E M + + KPNV + L+ KTG ++ + +LL
Sbjct: 330 FSLVIGGLCKEGKLNEGYAVFENMIR-KGSKPNVAIYTVLIDGYAKTGSVEDAI-RLLHR 387
Query: 441 MVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKH 500
M++ + D+ TY++V++GLC+ + E A F+ + + ++D + +
Sbjct: 388 MID-EGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAG 446
Query: 501 MYDAAEKI 508
D AE++
Sbjct: 447 RVDEAERL 454
>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 347
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 166/324 (51%), Gaps = 7/324 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ L K + R L+ EM KG + T ++ RF G+ E+A DE+
Sbjct: 17 YNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMS 76
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRV 253
GL N N L+ LCK+ KV+ A ++F ++ K C P+ TFN I G CK+N+
Sbjct: 77 GKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGC-KPDIFTFNSLIFGLCKVNKF 135
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
+EA Q+M G I+Y+T+I ++ R+ + +L+++M +GCP + +TY +
Sbjct: 136 EEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGL 195
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
+ L ++G+ E+ + + E M G P++ N LI L R +Q A+ + +M G
Sbjct: 196 IKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLR-DMIHRG 254
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
+ PD T+N++I G ++A ++ +++ ++E P+ T++ L+ K G D+
Sbjct: 255 LTPDIVTYNSLINGLCKTGRAQEALNLFDKL-QVEGICPDAITYNTLISWHCKEGMFDDA 313
Query: 434 LSQLLDDMVNKHHLSLDITTYTLV 457
LL V+ + ++T Y LV
Sbjct: 314 -HLLLSRGVDSGFIPNEVTWYILV 336
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 137/254 (53%), Gaps = 4/254 (1%)
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYEL 294
P+ T+N I G CK + A+ + EM+ GC P VI+Y+ +I +C++ + +
Sbjct: 12 PDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNV 71
Query: 295 LDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGR 354
LDEM +G N V Y ++S L K ++A+ + M G KPD FN LI+ L +
Sbjct: 72 LDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCK 131
Query: 355 ASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNV 414
++ +EA+ +YQ +M GV +T T+NT+I F G ++A ++ +M C +
Sbjct: 132 VNKFEEALGLYQ-DMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDM-LFRGCPLDD 189
Query: 415 QTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLF 474
T++ L+K+ + G ++ L+ L +DM++K L+ + + ++I+GLCR + A
Sbjct: 190 ITYNGLIKALCRAGNIEKGLA-LFEDMMSK-GLNPNNISCNILINGLCRTGNIQHALEFL 247
Query: 475 KEMIGHDITPRYQT 488
++MI +TP T
Sbjct: 248 RDMIHRGLTPDIVT 261
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 153/303 (50%), Gaps = 7/303 (2%)
Query: 205 TMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQE 262
T N L+ LCK+G + AR + +++K C PN T+ I I +CK R++EA+ + E
Sbjct: 16 TYNTLILGLCKKGYLVSARELMNEMQIKGC-EPNVITYTILIDRFCKEGRLEEARNVLDE 74
Query: 263 MKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGD 322
M G G + Y+ +I + C+ + +M ++GC P++ T+ +++ L K
Sbjct: 75 MSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNK 134
Query: 323 FEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFN 382
FEEA+ + + M + G ++ +N LI+ R +QEA+ + +M G D T+N
Sbjct: 135 FEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVN-DMLFRGCPLDDITYN 193
Query: 383 TMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMV 442
+I G+ EK + E+M + PN + + L+ +TG L + L DM+
Sbjct: 194 GLIKALCRAGNIEKGLALFEDMMS-KGLNPNNISCNILINGLCRTGNIQHAL-EFLRDMI 251
Query: 443 NKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMY 502
++ L+ DI TY +I+GLC+ + + A LF ++ I P T ++ ++ M+
Sbjct: 252 HRG-LTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMF 310
Query: 503 DAA 505
D A
Sbjct: 311 DDA 313
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 125/234 (53%), Gaps = 4/234 (1%)
Query: 261 QEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKS 320
+ M GC P + +Y+T+I C++ EL++EMQ +GC PNV+TYT ++ K
Sbjct: 3 ESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKE 62
Query: 321 GDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTST 380
G EEA + ++M G ++ +NCLI L + +VQ+A+ ++ +M G PD T
Sbjct: 63 GRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFG-DMSSKGCKPDIFT 121
Query: 381 FNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDD 440
FN++I E+A + ++M LE N T++ L+ + + G E L +L++D
Sbjct: 122 FNSLIFGLCKVNKFEEALGLYQDM-LLEGVIANTITYNTLIHAFLRRGAMQEAL-KLVND 179
Query: 441 MVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
M+ + LD TY +I LCRA E LF++M+ + P +C ++++
Sbjct: 180 MLFR-GCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILIN 232
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 150/303 (49%), Gaps = 6/303 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAK--VMRRFSGAGQWED 186
G E + Y +++D K ++++ R +L+EMS G + LN + ++ + +D
Sbjct: 44 GCEPNVITYTILIDRFCKEGRLEEARNVLDEMS-GKGLALNAVGYNCLISALCKDEKVQD 102
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIH 245
A+ F ++ + G + + T N L+ LCK K E A ++ + L + N T+N IH
Sbjct: 103 ALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIH 162
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
+ + + EA + +M GC I+Y+ +I++ CR N K L ++M ++G P
Sbjct: 163 AFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNP 222
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N ++ +++ L ++G+ + A+ M G PD +N LI L + R QEA+ ++
Sbjct: 223 NNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLF 282
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
++ G+ PD T+NT+I+ G + A H+L PN T++ L+ +
Sbjct: 283 D-KLQVEGICPDAITYNTLISWHCKEGMFDDA-HLLLSRGVDSGFIPNEVTWYILVSNFI 340
Query: 426 KTG 428
K G
Sbjct: 341 KEG 343
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 81/160 (50%), Gaps = 4/160 (2%)
Query: 166 VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSV 225
+T N + K + R AG E + F+++ + GL N + N+L++ LC+ G ++ A
Sbjct: 190 ITYNGLIKALCR---AGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEF 246
Query: 226 FLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCR 284
++ + P+ T+N I+G CK R EA +++ G P I+Y+T+I +C+
Sbjct: 247 LRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCK 306
Query: 285 QYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
+ F + LL G PN VT+ ++S K GD E
Sbjct: 307 EGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 346
>gi|255582957|ref|XP_002532249.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528067|gb|EEF30143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 507
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 169/360 (46%), Gaps = 43/360 (11%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS 161
L+ K++ R + DWK AL F W S Y ++DILGK+R+ D++ +L+ MS
Sbjct: 82 LILKVLKRHRSDWKPALIFFNWVSKGGKVLMGSGAYNEILDILGKMRRFDELSQVLDIMS 141
Query: 162 KGH-IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVE 220
K +V T ++ R++ A + E+A+ F+ GLE + + LL LC+ V+
Sbjct: 142 KREGLVNEETYRVLVNRYAAAHKVEEAIEIFNTRRDIGLEIDLVSFQNLLMFLCRYKHVQ 201
Query: 221 LARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQ 280
+A S+ + T NI ++GWC + V EA+ +++ G C P + +Y T I+
Sbjct: 202 IAESLLYSKGKDFGMDIKTMNIVLNGWCVLGNVHEAKRFWKDIIGSKCKPDLFTYGTFIK 261
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
+ ++ ++ M + C P+VV
Sbjct: 262 ALTKKGKLGTALKIYRAMWEKQCKPDVV-------------------------------- 289
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
NC+I L +RV EA+ V++ EM + G P+ +T+N++I FS EK + +
Sbjct: 290 ---ICNCIIDALCFKNRVPEALEVFR-EMSQQGCLPNGATYNSLIKHFSRIRRMEKVYEL 345
Query: 401 LEEM-NKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIH 459
L+EM +K C P+ TF+ LLK+ K E L +L+ M ++ + TY L++
Sbjct: 346 LDEMLDKKGSCMPDHITFNYLLKAL----KKPEELPLVLERM-ERNGCMISTDTYNLILR 400
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 176/350 (50%), Gaps = 15/350 (4%)
Query: 145 GKVRQ-MDQMRALLEEMSKGHIVTLN-TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKN 202
G+V+ +D MR + E +G I T V+ + G+ ++AV+ FDE+ T G K
Sbjct: 533 GRVQAALDIMREMRE---RGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKP 589
Query: 203 TETM-NLLLDTLCKEGKVELA---RSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQW 258
M N L+ C +GK++ A R +E + T+N+ +H R EA
Sbjct: 590 EAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAM--TVATYNLLVHALFMDGRGTEAYE 647
Query: 259 TIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLA 318
++EM G G P V +Y+ +I +C++ N K E+ + M +G VVTYT ++ L+
Sbjct: 648 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALS 707
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDT 378
K G +E ++ ++ G +PD +N LI + + + A + EM + +APD
Sbjct: 708 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMG-EMEKKRIAPDD 766
Query: 379 STFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLL 438
T+NT++ G ++A +++EM + +P++ T++ L+ G + L ++
Sbjct: 767 VTYNTLMRGLCLLGRVDEARKLIDEMTE-RGIQPDLVTYNTLISGYSMKGDVKDAL-RIR 824
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
++M+NK + + TY +I GLC+ + + A + KEM+ + ITP T
Sbjct: 825 NEMMNK-GFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDST 873
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 171/393 (43%), Gaps = 47/393 (11%)
Query: 155 ALLEEMSKGHIVTLNTIAKVM-RRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTL 213
AL +M + + T +M R AG+ A+ ++ N T N ++
Sbjct: 474 ALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGF 529
Query: 214 CKEGKVELARSVFLELK--SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG-CHP 270
C G+V+ A + E++ I PN +T+ I GWCK+ RVDEA EM G P
Sbjct: 530 CSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKP 589
Query: 271 CVISYSTIIQSYCRQ------------------------YNF-----------SKVYELL 295
+ Y+ +I YC Q YN ++ YEL+
Sbjct: 590 EAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELV 649
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
+EM +G P+V TY +++ K G+ ++A+ I E M G + + LIY L +
Sbjct: 650 EEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKK 709
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQ 415
+VQE ++ E G+ PD +N +I S G+ ++AF ++ EM K + P+
Sbjct: 710 GQVQETDKLFD-EAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEK-KRIAPDDV 767
Query: 416 TFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFK 475
T++ L++ G+ DE +L+D+M + + D+ TY +I G + A +
Sbjct: 768 TYNTLMRGLCLLGRVDEA-RKLIDEMTERG-IQPDLVTYNTLISGYSMKGDVKDALRIRN 825
Query: 476 EMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
EM+ P T ++ + + D AE +
Sbjct: 826 EMMNKGFNPTLLTYNALIQGLCKNGQGDDAENM 858
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 145/309 (46%), Gaps = 6/309 (1%)
Query: 81 DEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWK--SALGIFRWAGSCPGYEHSSEIYE 138
DE + + ++P + N LI + D K +AL ++R G + Y
Sbjct: 572 DEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTAL-LYRDRMVERGVAMTVATYN 630
Query: 139 MMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTF 197
++V L + + L+EEM KG + T ++ G + A+ F+ +
Sbjct: 631 LLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRR 690
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEA 256
G+ T L+ L K+G+V+ +F E ++ I P+ +N I+ +D A
Sbjct: 691 GVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRA 750
Query: 257 QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSY 316
+ EM+ P ++Y+T+++ C + +L+DEM +G P++VTY T++S
Sbjct: 751 FEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISG 810
Query: 317 LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
+ GD ++A+RI +M G P +N LI L + + +A + + EM ENG+ P
Sbjct: 811 YSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVK-EMVENGITP 869
Query: 377 DTSTFNTMI 385
D ST+ ++I
Sbjct: 870 DDSTYISLI 878
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 114/248 (45%), Gaps = 10/248 (4%)
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRIT 330
C +++ +++ C ++ ELL +M PN VTY TV++ G + A+ I
Sbjct: 487 CTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIM 542
Query: 331 EKMKIVGS-KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFS 389
+M+ G P+ + +I + RV EAV V+ + + V P+ +N +I +
Sbjct: 543 REMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYC 602
Query: 390 HHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSL 449
G + A + M + V T++ L+ + F G+ E +L+++M K L+
Sbjct: 603 DQGKLDTALLYRDRMVE-RGVAMTVATYNLLVHALFMDGRGTEAY-ELVEEMGGKG-LAP 659
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI- 508
D+ TY ++I+G C+ + A +F+ M + T ++ + +K +K+
Sbjct: 660 DVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLF 719
Query: 509 -EAVMKKL 515
EAV + +
Sbjct: 720 DEAVRRGI 727
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 104/227 (45%), Gaps = 7/227 (3%)
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
+ + L +M P T+ ++ +L +G A+ + +M +P++ +N +
Sbjct: 470 APAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTV 525
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
I RVQ A+ + + G+AP+ T+ T+I+ + G ++A V +EM
Sbjct: 526 IAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKG 585
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
KP ++ L+ GK D L L D + + +++ + TY L++H L +
Sbjct: 586 EVKPEAVMYNALIGGYCDQGKLDTAL--LYRDRMVERGVAMTVATYNLLVHALFMDGRGT 643
Query: 469 WAYLLFKEMIGHDITPRYQTCRLILD-EVKQKHMYDAAEKIEAVMKK 514
AY L +EM G + P T ++++ K+ ++ A E E + ++
Sbjct: 644 EAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRR 690
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 99/227 (43%), Gaps = 5/227 (2%)
Query: 95 AIQPSHYLVNKLI--HRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQ 152
+ P + N LI H + + K AL IF S G + Y ++ L K Q+ +
Sbjct: 656 GLAPDVFTYNILINGHCKEGNVKKALEIFENM-SRRGVRATVVTYTALIYALSKKGQVQE 714
Query: 153 MRALLEE-MSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLD 211
L +E + +G L ++ S +G + A E+ + + T N L+
Sbjct: 715 TDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMR 774
Query: 212 TLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHP 270
LC G+V+ AR + E+ + I P+ T+N I G+ V +A EM G +P
Sbjct: 775 GLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNP 834
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
+++Y+ +IQ C+ ++ EM G P+ TY +++ L
Sbjct: 835 TLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 881
>gi|242066030|ref|XP_002454304.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
gi|241934135|gb|EES07280.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
Length = 638
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 111/479 (23%), Positives = 205/479 (42%), Gaps = 90/479 (18%)
Query: 96 IQPSHYLVNKLIHRFKDDWKSALGI------FRWAGSCPGYEHSSEIYEMMVDILGKVRQ 149
++ H+LV +++ K+ +G+ FRWA YEH + Y ++ L V Q
Sbjct: 86 LRVDHWLVREVM-------KTDIGVNVKMQFFRWAAKRRNYEHDTSTYMALIRCLEVVEQ 138
Query: 150 MDQMRALLEEMSKGHI--VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN 207
+M +++EM + I VT +++V+R A A+ F ++ T + + N
Sbjct: 139 YGEMWKMIQEMVRNPICVVTPTELSEVVRMLGNAKMVSKAIAIFYQIKTRKCQPTAQAYN 198
Query: 208 LLLDTLCKEGKVELARSVFLELKS---CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
++ L EG+ ++ E+ + C P + T++ I +CK+ R D A + EMK
Sbjct: 199 SMIIMLMHEGQYGKVHELYNEMSTEGHCFP-DTMTYSALISAFCKLGRRDSATQLLNEMK 257
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
+G P Y+ +I + + + L +EM+ Q C P+V TYT ++ L K+G +
Sbjct: 258 ENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRID 317
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ------------------ 366
EA +M+ G +PD+ N +I LG+A R+ +A+ ++Q
Sbjct: 318 EAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTII 377
Query: 367 -----------------VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNK--- 406
M E+G++P + T++ +I F EKA +LEEM++
Sbjct: 378 KALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGF 437
Query: 407 ------------------------------LEHC-KPNVQTFHPLLKSCFKTGKTDECLS 435
E+C + + + ++K K G+ D+ ++
Sbjct: 438 PPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAIN 497
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
+ D+M NK + D+ Y ++ GL R + A + M H P + +IL+
Sbjct: 498 -MFDEM-NKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILN 554
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 184/380 (48%), Gaps = 16/380 (4%)
Query: 94 NAIQPSHYLVNKLIHRF--KDDWKSALGIF---RWAGSCPGYEHSSEIYEMMVDILGKVR 148
N +QP+ + LI F DD AL +F R P +E+ + LGK
Sbjct: 259 NGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMRHQYCRPDVFTYTEL----IRGLGKAG 314
Query: 149 QMDQMRALLEEMSKGHIVTLNTIAKVMRRFSG-AGQWEDAVRTFDELGTFGLEKNTETMN 207
++D+ EM + + M F G AG+ +DA++ F E+GT + T N
Sbjct: 315 RIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYN 374
Query: 208 LLLDTLCK-EGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKG 265
++ L + + + S F +K S I P++ T++I I G+CK NR+++A ++EM
Sbjct: 375 TIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDE 434
Query: 266 HGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEE 325
G PC +Y ++I + + + EL E++ + Y ++ +L K+G ++
Sbjct: 435 KGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDD 494
Query: 326 AIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMI 385
AI + ++M +G PD +N L+ L R + EA+ + M E+G PD +++N ++
Sbjct: 495 AINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMR-RMQEHGCIPDINSYNIIL 553
Query: 386 TMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKH 445
+ G +A +L M K +P+V +++ +L + G +E ++L+++M N
Sbjct: 554 NGLAKTGGPHRAMEMLSNM-KQSTVRPDVVSYNTVLGALSHAGMFEEA-AKLMEEM-NTL 610
Query: 446 HLSLDITTYTLVIHGLCRAN 465
D+ TY+ ++ + + +
Sbjct: 611 GFEYDLITYSSILEAIGKVD 630
>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Vitis vinifera]
Length = 879
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 172/369 (46%), Gaps = 9/369 (2%)
Query: 122 RWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSG 180
RW C + Y ++D K M+ L E+ KG + T+ T ++ F
Sbjct: 230 RWGQGCI---PNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCK 286
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHT 239
G ++ R E+ + GL N + N ++D K G + A + C P+ T
Sbjct: 287 KGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVT 346
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+N I G C+ +V EA +++ G G P SY+ +I +YC+Q + + L EM
Sbjct: 347 YNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMT 406
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
+G P++VTY ++ L +G+ + A+ I EKM G PD+ +N L+ L + ++
Sbjct: 407 ERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKL- 465
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
A + EM + V PD + T++ F +G+ ++A L E+ + P + ++
Sbjct: 466 PAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEA-RKLFELTIEKGMNPGIVGYNA 524
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
++K K G + ++ + + + K HL+ D TY+ VI G + + + A +F+EM+
Sbjct: 525 MIKGYCKFGMMKDAMACI--NRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVK 582
Query: 480 HDITPRYQT 488
P T
Sbjct: 583 MKCKPNVVT 591
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 118/497 (23%), Positives = 216/497 (43%), Gaps = 65/497 (13%)
Query: 62 PRLPD-IDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGI 120
PR+ + + I+ +H + +E Q+ + A +H +++++ D + L
Sbjct: 25 PRINNLVKDILEVLHTHNQWEENLQTRFSESEVLASDVAHLVLDRI-----RDVELGLKF 79
Query: 121 FRW------AGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAK 173
F W +G G+ +SS ++ +L + R +M +LE M + T ++
Sbjct: 80 FDWVSRGQYSGPINGFAYSS-----LLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSI 134
Query: 174 VMRRFSGAGQWEDAVRTFD-ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--- 229
V++ +S +G E A+ + L T+ + N LL+ L K G++E+AR ++ E+
Sbjct: 135 VIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEI 194
Query: 230 --------------------------------------KSCIPPNAHTFNIFIHGWCKIN 251
+ CIP N +N I G+CK
Sbjct: 195 DGAGDRCVDNYSTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIP-NIIFYNTLIDGYCKKG 253
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
++ A E+K G P V +Y II +C++ +F + LL EM ++G NV Y
Sbjct: 254 DMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYN 313
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
T++ K G +A+ E M G KPD +N LI R +V EA + + + +
Sbjct: 314 TIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGK 373
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
G+ P+ ++ +I + G +++A + L EM + H KP++ T+ L+ G+ D
Sbjct: 374 -GLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGH-KPDLVTYGALVHGLVVAGEVD 431
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRL 491
L+ + + M+ + D Y +++ GLC+ K A LL EM+ + P
Sbjct: 432 VALT-IREKMLERGVFP-DAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYAT 489
Query: 492 ILDEVKQKHMYDAAEKI 508
++D + D A K+
Sbjct: 490 LVDGFIRNGNLDEARKL 506
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 96/417 (23%), Positives = 180/417 (43%), Gaps = 45/417 (10%)
Query: 140 MVDILGKVRQMDQMRALLEEM-----SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
++++L K+ +++ R L +EM + V + +++ G+ E+ + ++
Sbjct: 171 LLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVKGLCKEGKLEEGRKLIEDR 230
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCK---- 249
G N N L+D CK+G +E+A +F+ELK P T+ I+G+CK
Sbjct: 231 WGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDF 290
Query: 250 ---------------------INRVDEAQW----------TIQEMKGHGCHPCVISYSTI 278
N + +A++ TI+ M GC P +++Y+T+
Sbjct: 291 KAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTL 350
Query: 279 IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
I CR S+ +LL++ +G PN +YT ++ K G ++ A +M G
Sbjct: 351 ISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGH 410
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
KPD + L++ L A V A+ + + +M E GV PD +N +++ A
Sbjct: 411 KPDLVTYGALVHGLVVAGEVDVALTIRE-KMLERGVFPDAGIYNILMSGLCKKFKLPAAK 469
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
+L EM + P+ + L+ + G DE ++ L ++ + ++ I Y +I
Sbjct: 470 LLLAEMLD-QSVLPDAFVYATLVDGFIRNGNLDE--ARKLFELTIEKGMNPGIVGYNAMI 526
Query: 459 HGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
G C+ + A M + P T ++D ++H D A+K+ M K+
Sbjct: 527 KGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKM 583
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 129/276 (46%), Gaps = 18/276 (6%)
Query: 209 LLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG 267
L+D + G ++ AR +F L ++ + P +N I G+CK + +A I MK
Sbjct: 490 LVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRH 549
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
P +YST+I Y +Q++ ++ EM C PNVVTYT++++ + GD ++
Sbjct: 550 LAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSL 609
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITM 387
+I +M+ G P+ ++ LI + + +++ +A ++ EM N P+ TFN ++
Sbjct: 610 KIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFE-EMLMNKCVPNDVTFNYLVNG 668
Query: 388 FSHHGHH---EKAFHVLEEMNKL----------EHCKPNVQTFHPLLKSCFKTGKTDECL 434
FS +G EK E + + P ++ +L + G L
Sbjct: 669 FSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTAL 728
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKC-EW 469
QL + M +K + D ++ ++HG+C + EW
Sbjct: 729 -QLSNKMTSKGCIP-DSVSFVALLHGVCLEGRSKEW 762
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 107/246 (43%), Gaps = 10/246 (4%)
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE-K 332
+YS++++ R FS++ +L+ M+ + P + V+ + SG E+A+ +
Sbjct: 96 AYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELYYFV 155
Query: 333 MKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFN----TMITMF 388
+K PD N L+ L + R++ A +Y EM E A D N M+
Sbjct: 156 LKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYD-EMLEIDGAGDRCVDNYSTCIMVKGL 214
Query: 389 SHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
G E+ ++E+ + C PN+ ++ L+ K G E + L ++ K L
Sbjct: 215 CKEGKLEEGRKLIEDRWG-QGCIPNIIFYNTLIDGYCKKGDM-EMANGLFIELKLKGFLP 272
Query: 449 LDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD-EVKQKHMYDAAEK 507
+ TY +I+G C+ + L EM +T Q I+D K H+ A E
Sbjct: 273 -TVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVET 331
Query: 508 IEAVMK 513
IE +++
Sbjct: 332 IEGMIE 337
>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 181/374 (48%), Gaps = 10/374 (2%)
Query: 125 GSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQ 183
G CP + Y ++ L V + + L++EM +G V++ ++ G
Sbjct: 215 GVCP----NEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGM 270
Query: 184 WEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNI 242
+A FDE+ G E N T L+ C +G V++AR +F + + T+N+
Sbjct: 271 LVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNV 330
Query: 243 FIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
FIHG+CK+ RV +A EM G P +++Y+++I C+ S +E++ M G
Sbjct: 331 FIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSG 390
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
P++VT ++ L KS ++AI + ++ G PD + LI+ + R+ EA+
Sbjct: 391 LTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAM 450
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLK 422
+ + +M + P T++ +I G A+ +L EM+ ++ P+ T+ LL
Sbjct: 451 NLLR-DMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMH-VKGPLPDTITYSILLD 508
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
+ +K DE + L + M+ K L D+ YT++I G C++ + + A LF+EM ++
Sbjct: 509 ALWKKQHLDEAVF-LFNQMI-KRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNL 566
Query: 483 TPRYQTCRLILDEV 496
P T ++ + V
Sbjct: 567 VPDIVTYTILFNAV 580
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 145/299 (48%), Gaps = 5/299 (1%)
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDE 255
F ++ N ++++D LC+ G V+ + E+ + + PN T+ I G C + + E
Sbjct: 179 FFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLE 238
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
+ EM G V ++ +I C+ + E+ DEM +G PN+VT T +M
Sbjct: 239 GFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMG 298
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
G+ + A + + + G K D +N I+ + RV++AV V+ EM GV
Sbjct: 299 GYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFD-EMCREGVV 357
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS 435
P+ T+N++I G A+ +++ M++ P++ T LL K+ + D+ +
Sbjct: 358 PNIVTYNSLIDCLCKAGEVSGAWEIVKTMHR-SGLTPDIVTCCILLDGLCKSKRLDQAI- 415
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
LL + + + L+ D+ +YT++IHG C + + A L ++M ++ P T ++D
Sbjct: 416 -LLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLID 473
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 130/266 (48%), Gaps = 7/266 (2%)
Query: 144 LGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNT 203
+G+VR D +R E +G + + T ++ AG+ A + GL +
Sbjct: 338 VGRVR--DAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDI 395
Query: 204 ETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQE 262
T +LLD LCK +++ A +F +L +S + P+ ++ I IHG C R+ EA +++
Sbjct: 396 VTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRD 455
Query: 263 MKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGD 322
M P +++YS +I CR S + LL+EM +G P+ +TY+ ++ L K
Sbjct: 456 MHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQH 515
Query: 323 FEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFN 382
+EA+ + +M G +PD + +I ++ R+ EA+ +++ EM + PD T+
Sbjct: 516 LDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFR-EMHMKNLVPDIVTYT 574
Query: 383 TMITMFSHHGHHE---KAFHVLEEMN 405
+ G + K +V+ ++N
Sbjct: 575 ILFNAVFKSGSNSYEWKFVNVIRDIN 600
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 85/174 (48%), Gaps = 12/174 (6%)
Query: 148 RQMDQMRALLEEMSKG----HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNT 203
R+M + LL +M HIVT + + + R +G+ +A R +E+ G +T
Sbjct: 444 RRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCR---SGRISNAWRLLNEMHVKGPLPDT 500
Query: 204 ETMNLLLDTLCKEGKVELARSVFL---ELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTI 260
T ++LLD L K K L +VFL +K + P+ + I I G+CK R+DEA
Sbjct: 501 ITYSILLDALWK--KQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLF 558
Query: 261 QEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
+EM P +++Y+ + + + + S ++ ++ ++ PP V+ Y +
Sbjct: 559 REMHMKNLVPDIVTYTILFNAVFKSGSNSYEWKFVNVIRDINPPPRVLKYLAAL 612
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 93/224 (41%), Gaps = 10/224 (4%)
Query: 292 YELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYT 351
+ + ++ +G + V TV+ L +G +A+ +++ G + + LI
Sbjct: 92 FSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILING 151
Query: 352 LGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFS-------HHGHHEKAFHVLEEM 404
L RV EAV + ++ E D + M+S +G ++ F EM
Sbjct: 152 LCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEM 211
Query: 405 NKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRA 464
C PN T+ L++ GK E L+D+M+ + L + + +T++I GLC+
Sbjct: 212 MGNGVC-PNEFTYGSLIRGLCGVGKFLEGFG-LVDEMI-RRGLDVSVYVFTVLIDGLCKN 268
Query: 465 NKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
A +F EM+ P TC ++ K D A ++
Sbjct: 269 GMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMAREL 312
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 99/325 (30%), Positives = 160/325 (49%), Gaps = 12/325 (3%)
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFI 244
++AV+ F EL EKNT + N+LL LC G+++ A +F E+ S PP+ T+ I +
Sbjct: 239 DEAVQLFQELP----EKNTCSYNILLKALCTAGRIKDAHQLFDEMAS--PPDVVTYGIMV 292
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
HG+C ++ ++ A + EM G ++Y+++I C + S ++++M G
Sbjct: 293 HGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVV 352
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
+ +TTVMS + GD A ++M+ G D + LI L RA ++EA V
Sbjct: 353 LDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERV 412
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
Q EM + G+ D T+ +I + G +AF V +M + + PNV T+ L
Sbjct: 413 LQ-EMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQ-KRVTPNVVTYTALSDGL 470
Query: 425 FKTGKTDECLS-QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
K G D C + +LL +M +K L L+I TY +I+GLC+A E A +M +
Sbjct: 471 CKQG--DVCAANELLHEMCSK-GLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLK 527
Query: 484 PRYQTCRLILDEVKQKHMYDAAEKI 508
P T I+ + Q D A +
Sbjct: 528 PDVYTYTTIIGALCQSKELDRAHSL 552
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 186/389 (47%), Gaps = 8/389 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQM-DQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G E + Y ++ +L Q+ D +R + + + G ++ VM F G A
Sbjct: 315 GLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAA 374
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHG 246
FDE+ GL + T L++ LC+ G+++ A V E++ + +A T+ + I G
Sbjct: 375 RNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDG 434
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
+CK+ ++ EA +M P V++Y+ + C+Q + ELL EM ++G N
Sbjct: 435 YCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELN 494
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
+ TY ++++ L K+G+ E+A+R M G KPD + +I L ++ + A + Q
Sbjct: 495 IFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQ 554
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS-CF 425
EM + G+ P T+N ++ F G E +LE M + ++ PN T++ L+K C
Sbjct: 555 -EMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLE-KNIHPNTTTYNSLMKQYCI 612
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
+ K + +++ M+++ + + TY ++I G C+A + A EMI
Sbjct: 613 E--KNMKSTTEIYKGMLSQEVVP-NENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLT 669
Query: 486 YQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
+ ++ + +K + A ++ M+K
Sbjct: 670 ASSYNALIRLLNKKKKFTEARRLFEKMRK 698
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 181/372 (48%), Gaps = 9/372 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIA--KVMRRFSGAGQWEDAVRTFDEL 194
Y +MV + +++ LL EM+ + LN +A V+ GQ DAVR +++
Sbjct: 288 YGIMVHGYCTLSELETAIKLLSEMA-ARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDM 346
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRV 253
G+ + ++ C++G + AR+ F E+ K + + T+ I+G C+ +
Sbjct: 347 VMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGEL 406
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
EA+ +QEM+ G ++Y+ +I YC+ ++ + + ++M + PNVVTYT +
Sbjct: 407 KEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTAL 466
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
L K GD A + +M G + + +N LI L +A +++A+ ++M E G
Sbjct: 467 SDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRT-MIDMDEAG 525
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
+ PD T+ T+I ++A +L+EM + KP + T++ L+ +G+ E
Sbjct: 526 LKPDVYTYTTIIGALCQSKELDRAHSLLQEMLD-KGIKPTIVTYNVLMNGFCMSGRV-EG 583
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCR-LI 492
+LL+ M+ K ++ + TTY ++ C + ++K M+ ++ P T LI
Sbjct: 584 GKRLLEWMLEK-NIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILI 642
Query: 493 LDEVKQKHMYDA 504
K ++M +A
Sbjct: 643 KGHCKARNMKEA 654
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 88/184 (47%), Gaps = 4/184 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ L + +++D+ +LL+EM KG T+ T +M F +G+ E R + +
Sbjct: 533 YTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWML 592
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVD 254
+ NT T N L+ C E ++ ++ + S + PN +T+NI I G CK +
Sbjct: 593 EKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMK 652
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ--GCPPNVVTYTT 312
EA + EM G SY+ +I+ ++ F++ L ++M+ P+V +
Sbjct: 653 EALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYI 712
Query: 313 VMSY 316
+S+
Sbjct: 713 DLSF 716
>gi|108862162|gb|ABA95747.2| Cytochrome P450 family protein [Oryza sativa Japonica Group]
Length = 1595
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 154/303 (50%), Gaps = 5/303 (1%)
Query: 207 NLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKG 265
N LL L ++ + + AR ++ E L + ++ + + G C RV+E I+ G
Sbjct: 947 NRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWG 1006
Query: 266 HGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEE 325
GC P V+ Y+ +I YCR+ + + LL EM+ G P +VTY +++++L K GD E+
Sbjct: 1007 AGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEK 1066
Query: 326 AIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMI 385
+ +M+ G P+ + +N +I L +A+ + + +M +G PD TFNT+I
Sbjct: 1067 IGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILK-QMFASGCDPDIITFNTLI 1125
Query: 386 TMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKH 445
T H GH KA H L E + E PN ++ PL+ G+ S LL +M+ +
Sbjct: 1126 TGLCHEGHVRKAEHFLREAIRRE-LNPNQLSYTPLIHGFCMRGEL-MVASDLLVEMMGRG 1183
Query: 446 HLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
H + D+ T+ +IHGL A K A ++ ++M + P +++ + +K M AA
Sbjct: 1184 H-TPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAA 1242
Query: 506 EKI 508
+ I
Sbjct: 1243 KNI 1245
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/416 (24%), Positives = 166/416 (39%), Gaps = 46/416 (11%)
Query: 122 RWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALL---EEMSKGHIVTLNTIAKVMRRF 178
RW C + Y +++D G R+ D R LL E + G + TL T ++
Sbjct: 1004 RWGAGCIPH---VVFYNVLID--GYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWL 1058
Query: 179 SGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNA 237
G E F E+ G N + N ++D LC A + ++ S P+
Sbjct: 1059 GKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDI 1118
Query: 238 HTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDE 297
TFN I G C V +A+ ++E +P +SY+ +I +C + +LL E
Sbjct: 1119 ITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVE 1178
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA-- 355
M +G P+VVT+ ++ L +G EA+ + EKM PD +N LI L +
Sbjct: 1179 MMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRM 1238
Query: 356 -------------SRVQEAVYVYQVE-------------------MPENGVAPDTSTFNT 383
VQ +VY M GV PD + N
Sbjct: 1239 LPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNA 1298
Query: 384 MITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVN 443
MI + G +A + M K+ C P+ T+ ++ K G + L L D +
Sbjct: 1299 MIKGYCQFGMMSEAILCMSNMRKV-GCIPDEFTYTTVISGYAKQGNLNGALRWLCDMI-- 1355
Query: 444 KHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQK 499
K ++ TY+ +I+G C+ + A LF M ++P T +++ + +K
Sbjct: 1356 KRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKK 1411
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 124/273 (45%), Gaps = 6/273 (2%)
Query: 156 LLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK 215
L+E M +GH + T ++ AG+ +A+ +++ + + N+L+ LCK
Sbjct: 1176 LVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCK 1235
Query: 216 EGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVIS 274
+ + A+++ E L+ + P+ + I G+ + + +A+ + M+ G P ++S
Sbjct: 1236 KRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVS 1295
Query: 275 YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
+ +I+ YC+ S+ + M+ GC P+ TYTTV+S AK G+ A+R M
Sbjct: 1296 CNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMI 1355
Query: 335 IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHH 394
KP+ ++ LI + A ++ M ++P+ T+ +I
Sbjct: 1356 KRKCKPNVVTYSSLINGYCKTGDTDSAEGLF-ANMQAEALSPNVVTYTILIGSLFKKDKV 1414
Query: 395 EKAFHVLEEMNKLEHCKPNVQTFHPL---LKSC 424
+A E M L HC PN T H L L SC
Sbjct: 1415 LRAGLYFETM-LLNHCSPNDVTLHYLVNGLTSC 1446
>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16640, mitochondrial; Flags: Precursor
gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 186/390 (47%), Gaps = 11/390 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAV 188
Y + S+ EM+ + + ++ D + + + ++ ++++ S +++ +
Sbjct: 42 AYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVI 101
Query: 189 RTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGW 247
++++ G+ N T N+LL+ C+ ++ LA S ++ K P+ TF ++G+
Sbjct: 102 YLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGF 161
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
C+ +RV +A + +M G G P V+ Y+TII C+ +LL+ M+ G P+V
Sbjct: 162 CRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDV 221
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
VTY +++S L SG + +A R+ M PD FN LI + RV EA Y+
Sbjct: 222 VTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYE- 280
Query: 368 EMPENGVAPDTSTFNTMI---TMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
EM + PD T++ +I M+S E+ F + + C P+V T+ L+
Sbjct: 281 EMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVS----KGCFPDVVTYSILINGY 336
Query: 425 FKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
K+ K + + + +++ + + TYT++I G CRA K A +F+ M+ + P
Sbjct: 337 CKSKKVEHGMKLFCE--MSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHP 394
Query: 485 RYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
T ++L + + A I A M+K
Sbjct: 395 NIITYNVLLHGLCDNGKIEKALVILADMQK 424
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 158/361 (43%), Gaps = 47/361 (13%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQW 184
GY+ + IY ++D L K +Q+D LL M K I VT N++ + +G+W
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSL---ISGLCSSGRW 237
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIF 243
DA R + + + T N L+D KEG+V A + E+ + + P+ T+++
Sbjct: 238 SDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLL 297
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
I+G C +R+DEA+ M GC P V++YS +I YC+ +L EM +G
Sbjct: 298 IYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGV 357
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
N VTYT ++ ++G A I +M G P+ +N L++ L ++++A+
Sbjct: 358 VRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKAL- 416
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
V +M +NG+ D T+N +I G A+ + +C N Q P
Sbjct: 417 VILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDI--------YCSLNCQGLMP---- 464
Query: 424 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
DI TYT ++ GL + A LF++M I
Sbjct: 465 --------------------------DIWTYTTMMLGLYKKGLRREADALFRKMKEDGIL 498
Query: 484 P 484
P
Sbjct: 499 P 499
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 178/388 (45%), Gaps = 6/388 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
G H+ ++++ + Q+ + L +M K GH ++ T ++ F + DA
Sbjct: 111 GIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDA 170
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHG 246
+ FD++ G + N N ++D LCK +V+ A + + K I P+ T+N I G
Sbjct: 171 LYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISG 230
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C R +A + M +P V +++ +I + ++ S+ E +EM + P+
Sbjct: 231 LCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPD 290
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
+VTY+ ++ L +EA + M G PD ++ LI ++ +V+ + ++
Sbjct: 291 IVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLF- 349
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
EM + GV +T T+ +I + G A + M PN+ T++ LL
Sbjct: 350 CEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRM-VFCGVHPNIITYNVLLHGLCD 408
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
GK ++ L L D + K+ + DI TY ++I G+C+A + A+ ++ + + P
Sbjct: 409 NGKIEKALVILAD--MQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDI 466
Query: 487 QTCRLILDEVKQKHMYDAAEKIEAVMKK 514
T ++ + +K + A+ + MK+
Sbjct: 467 WTYTTMMLGLYKKGLRREADALFRKMKE 494
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 108/207 (52%), Gaps = 2/207 (0%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +++ L ++D+ + M SKG + T + ++ + + + E ++ F E+
Sbjct: 294 YSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMS 353
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVD 254
G+ +NT T +L+ C+ GK+ +A +F + C + PN T+N+ +HG C +++
Sbjct: 354 QRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIE 413
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
+A + +M+ +G +++Y+ II+ C+ + +++ + QG P++ TYTT+M
Sbjct: 414 KALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMM 473
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPD 341
L K G EA + KMK G P+
Sbjct: 474 LGLYKKGLRREADALFRKMKEDGILPN 500
>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 586
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 173/381 (45%), Gaps = 39/381 (10%)
Query: 163 GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELA 222
GH T ++R G+ DA+ FD++ G + N T L++ LCK G A
Sbjct: 134 GHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAA 193
Query: 223 RSVF--LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQ 280
+ +E +C P+ + I CK +V EA +M G G P + +Y+++I
Sbjct: 194 IRLLRSMEQGNC-QPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIH 252
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
S C + V LL++M P+VV ++TV+ L K G EA + + M I G +P
Sbjct: 253 SLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEP 312
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
+ +N L+ S + EAV V+ M NG AP+ ++NT+I + +KA ++
Sbjct: 313 NVVTYNALMDGHCLQSEMDEAVKVFDT-MVHNGYAPNVISYNTLINGYCKIQRMDKATYL 371
Query: 401 LEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQ------------------LLDDMV 442
EEM + E PN T++ L+ C G+ + ++ LLD +
Sbjct: 372 FEEMCQKE-LIPNTVTYNTLMHXC-HVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLC 429
Query: 443 NKHHL---------------SLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
K HL DI YT+VI G+CRA + E A +F + + P +
Sbjct: 430 KKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVR 489
Query: 488 TCRLILDEVKQKHMYDAAEKI 508
T ++++ + ++ + D A K+
Sbjct: 490 TYTIMINGLCRRGLLDEANKL 510
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 171/375 (45%), Gaps = 7/375 (1%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
+Y ++D L K RQ+ + L +M +G + T ++ +W+ +++
Sbjct: 211 VYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQM 270
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRV 253
+ + + ++D LCKEGK+ A V + + + PN T+N + G C + +
Sbjct: 271 INSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEM 330
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
DEA M +G P VISY+T+I YC+ K L +EM + PN VTY T+
Sbjct: 331 DEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTL 390
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
M + G ++AI + +M G PD + L+ L + S + EA+ + + N
Sbjct: 391 M-HXCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSN- 448
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
+ PD + +I G E A + ++ + +PNV+T+ ++ + G DE
Sbjct: 449 MDPDIQIYTIVIDGMCRAGELEAARDIFSNLSS-KGLRPNVRTYTIMINGLCRRGLLDEA 507
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
++L +M + + S D TY + GL + + A L +EM+ + T L++
Sbjct: 508 -NKLFMEM-DGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLV 565
Query: 494 DEVKQKHMYDAAEKI 508
+ + + + ++I
Sbjct: 566 EMLCDDKLDQSVKQI 580
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 163/357 (45%), Gaps = 40/357 (11%)
Query: 184 WEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNI 242
+DA+ +F+ + +T N LL ++ K + S+ ++ S IPP+ +T NI
Sbjct: 50 LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 109
Query: 243 FIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
I+ +C +NR+ A + ++ G P +++T+I+ C + L D+M +G
Sbjct: 110 LINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 169
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
PNVVTY T+++ L K G+ AIR+ M+ +PD + +I +L + +V EA
Sbjct: 170 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 229
Query: 363 YVYQVEMPENGVAPDTST-----------------------------------FNTMITM 387
++ +M G++PD T F+T++
Sbjct: 230 NLFS-KMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDA 288
Query: 388 FSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHL 447
G +A H + +M + +PNV T++ L+ + DE + ++ D MV+ +
Sbjct: 289 LCKEGKITEA-HDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAV-KVFDTMVHNGY- 345
Query: 448 SLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDA 504
+ ++ +Y +I+G C+ + + A LF+EM ++ P T ++ + DA
Sbjct: 346 APNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHXCHVGRLQDA 402
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 159/349 (45%), Gaps = 15/349 (4%)
Query: 65 PDIDVIISKVHVGSSEDEVFQS--LKQDHVCNAIQPSHYLVNKLIHRFKD--DWKSALGI 120
PD+ V S + + +V ++ L V I P + LIH + +WK +
Sbjct: 207 PDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTL 266
Query: 121 FRWAGSCPGYEHSSEIYEMMVDIL---GKVRQM-DQMRALLEEMSKGHIVTLNTIAKVMR 176
+ I+ +VD L GK+ + D + ++ + ++VT N + M
Sbjct: 267 LNQMINSK-IMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNAL---MD 322
Query: 177 RFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPP 235
+ ++AV+ FD + G N + N L++ CK +++ A +F E+ + + P
Sbjct: 323 GHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIP 382
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
N T+N +H C + R+ +A EM HG P + +Y ++ C++ + + LL
Sbjct: 383 NTVTYNTLMH-XCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALL 441
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
++ P++ YT V+ + ++G+ E A I + G +P+ R + +I L R
Sbjct: 442 KTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRR 501
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
+ EA ++ +EM NG +PD T+NT+ + +A +L+EM
Sbjct: 502 GLLDEANKLF-MEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEM 549
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 136/287 (47%), Gaps = 11/287 (3%)
Query: 233 IPP--NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSK 290
+PP ++ + N F N +D+A + M P + ++ ++ S + +
Sbjct: 28 LPPYFSSLSHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPT 87
Query: 291 VYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIY 350
V+ L ++M + G PP+V T +++ A + K+ +G +PD+ F LI
Sbjct: 88 VFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIR 147
Query: 351 TLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHC 410
L ++ +A++++ +M G P+ T+ T+I G+ A +L M + +C
Sbjct: 148 GLCVEGKIGDALHLFD-KMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQ-GNC 205
Query: 411 KPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWA 470
+P+V + ++ S K + E + L MV + +S DI TYT +IH LC N CEW
Sbjct: 206 QPDVVVYTSIIDSLCKDRQVTEAFN-LFSKMVGQ-GISPDIFTYTSLIHSLC--NLCEWK 261
Query: 471 YL--LFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEAVMKK 514
++ L +MI I P ++D + K+ + +A + ++ ++ +
Sbjct: 262 HVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIR 308
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/349 (19%), Positives = 142/349 (40%), Gaps = 40/349 (11%)
Query: 59 VDSPRLPDIDVIISKVHVGSSEDEVFQS--LKQDHVCNAIQPSHYLVNKLI--HRFKDDW 114
++S +PD+ + + V E ++ ++ + + ++P+ N L+ H + +
Sbjct: 271 INSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEM 330
Query: 115 KSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKV 174
A+ +F GY + Y +++ K+++MD+ L EEM + ++
Sbjct: 331 DEAVKVFDTMVH-NGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNT 389
Query: 175 MRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIP 234
+ G+ +DA+ F E+ G++
Sbjct: 390 LMHXCHVGRLQDAIALFHEM-------------------VAHGQI--------------- 415
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYEL 294
P+ T+ I + CK + +DEA ++ ++G P + Y+ +I CR ++
Sbjct: 416 PDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDI 475
Query: 295 LDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGR 354
+ ++G PNV TYT +++ L + G +EA ++ +M G PD +N + L +
Sbjct: 476 FSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQ 535
Query: 355 ASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEE 403
A+ + Q EM G + D ST ++ M + +L E
Sbjct: 536 NKEALRAIQLLQ-EMLARGFSADVSTTTLLVEMLCDDKLDQSVKQILSE 583
>gi|297734042|emb|CBI15289.3| unnamed protein product [Vitis vinifera]
Length = 793
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 176/364 (48%), Gaps = 18/364 (4%)
Query: 66 DIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAG 125
++ I+ ++ G + +E ++L N + + Y N+++ + +D ALG F W
Sbjct: 328 NVSRILRQLSWGPAAEEALRNL------NCLMDA-YQANQVLKQIQDH-PVALGFFYWLK 379
Query: 126 SCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKG----HIVTLNTIAKVMRRFSGA 181
G++H Y MV ILG+ RQ + LL EM + ++VT N +++ + A
Sbjct: 380 RQTGFKHDGHTYTTMVGILGRARQFGAINKLLAEMVRDGCQPNVVTYN---RLIHSYGRA 436
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTF 240
+AV FD + G + + T L+D K G +++A ++ +++ + P+ T+
Sbjct: 437 NYLNEAVSVFDRMQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAHLSPDTFTY 496
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
++ I+ K + A EM GC P +++Y+ +I + N+ EL +MQ
Sbjct: 497 SVIINCLGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPTALELYRDMQN 556
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
G P+ VTY+ VM L G EEA I +MK PD + L+ G+ V++
Sbjct: 557 AGFQPDKVTYSIVMEVLGHCGHLEEAEAIFTEMKRKNWVPDEPVYGLLVDLWGKVGNVEK 616
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
+ YQ M G+ P+ T N++++ F A+++L+ M +L +P++QT+ L
Sbjct: 617 SWEWYQA-MLNAGLCPNVPTCNSLLSAFLRVHRLSDAYNLLQSMLRL-GLQPSLQTYTLL 674
Query: 421 LKSC 424
L C
Sbjct: 675 LSCC 678
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 166/354 (46%), Gaps = 14/354 (3%)
Query: 161 SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVE 220
S GH+V +++++R+ S E+A+R + L + N +L + ++ V
Sbjct: 321 SSGHVV--ENVSRILRQLSWGPAAEEALRNLNCL------MDAYQANQVLKQI-QDHPVA 371
Query: 221 LARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQ 280
L +L+ ++ + HT+ + + + + EM GC P V++Y+ +I
Sbjct: 372 LGFFYWLKRQTGFKHDGHTYTTMVGILGRARQFGAINKLLAEMVRDGCQPNVVTYNRLIH 431
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
SY R ++ + D MQ GC P+ VTY T++ AK+G + A+ + +KM+ P
Sbjct: 432 SYGRANYLNEAVSVFDRMQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAHLSP 491
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
D+ ++ +I LG+A + A ++ EM + G P+ T+N MI + + ++ A +
Sbjct: 492 DTFTYSVIINCLGKAGHLTSAHKLF-CEMVDQGCVPNLVTYNIMIALQAKARNYPTALEL 550
Query: 401 LEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHG 460
+M +P+ T+ +++ G +E + +M K+ + D Y L++
Sbjct: 551 YRDMQNAGF-QPDKVTYSIVMEVLGHCGHLEEA-EAIFTEMKRKNWVP-DEPVYGLLVDL 607
Query: 461 LCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKH-MYDAAEKIEAVMK 513
+ E ++ ++ M+ + P TC +L + H + DA ++++++
Sbjct: 608 WGKVGNVEKSWEWYQAMLNAGLCPNVPTCNSLLSAFLRVHRLSDAYNLLQSMLR 661
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 182/385 (47%), Gaps = 7/385 (1%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS 161
L N + +D SA +F G + Y ++ L +V ++D+ + ++M
Sbjct: 8 LGNLVEANLNNDVNSAFSVFNMMPK-KGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMR 66
Query: 162 KGHIV-TLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVE 220
+ T+ T ++ +G+ +A+ F E+ G E N T ++++ +CKE K+E
Sbjct: 67 EDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLE 126
Query: 221 LARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
R + E+ + + P+ T+N I G+CK V+ AQ + M + C+P +Y+ +I
Sbjct: 127 EGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELI 186
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
+CR+ N + LL +M P+VVTY +++ K G + A R+ M G
Sbjct: 187 CGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVV 246
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
PD ++ I TL + R++EA ++ + E G+ + + +I + G + A
Sbjct: 247 PDQWTYSVFIDTLCKKGRIEEANVLFN-SLKEKGIKANEVIYTALIDGYCKAGKMDDANS 305
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIH 459
+L+ M E C PN T++ L+ K K E L L++ M+ K L + TYT++I
Sbjct: 306 LLDRM-LTEDCLPNSSTYNALIDGLCKERKVQEAL-LLMESMIQK-GLKCTVPTYTILIV 362
Query: 460 GLCRANKCEWAYLLFKEMIGHDITP 484
+ + ++A+ + +M+ P
Sbjct: 363 AMLKEGDFDYAHRILDQMVSSGYQP 387
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 172/396 (43%), Gaps = 36/396 (9%)
Query: 148 RQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN 207
R M + +LE +VT N++ + G + A R + + G+ + T +
Sbjct: 197 RAMALLSKMLESRLTPSVVTYNSLIHGQCKI---GYLDSAYRLLNLMNENGVVPDQWTYS 253
Query: 208 LLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
+ +DTLCK+G++E A +F LK I N + I G+CK ++D+A + M
Sbjct: 254 VFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTE 313
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
C P +Y+ +I C++ + L++ M +G V TYT ++ + K GDF+ A
Sbjct: 314 DCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYA 373
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
RI ++M G +PD + I+ ++EA + + M E GV PD T+ +I
Sbjct: 374 HRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSM-MFERGVMPDALTYTLVID 432
Query: 387 MFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD--------------- 431
+ G AF VL+ M C P+ T+ L+K K T
Sbjct: 433 AYGGLGLLNPAFDVLKRMFD-TGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVF 491
Query: 432 -------------ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
E +L + M+ +H S +I TY +I GLC+ + A LF M
Sbjct: 492 FADVADVWKMMKFETALELFEKML-EHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMN 550
Query: 479 GHDITPRYQTCRLILDEVKQKHMY-DAAEKIEAVMK 513
++P +L+ + +Y DA + A+M+
Sbjct: 551 ERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMME 586
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 125/272 (45%), Gaps = 13/272 (4%)
Query: 243 FIHGWCKI---------NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
++G+CK+ N V+ A M GC +SY+ +I C +
Sbjct: 1 MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60
Query: 294 LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLG 353
+ +M+ C P V TYT ++ L +SG EAI + +M+ G +P+ + +I +
Sbjct: 61 IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMC 120
Query: 354 RASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPN 413
+ ++++E + EM E G+ P T+N +I + G E A +L+ M+ C PN
Sbjct: 121 KETKLEEGRRILD-EMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHS-NSCNPN 178
Query: 414 VQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLL 473
+T++ L+ + ++ LL M+ + L+ + TY +IHG C+ + AY L
Sbjct: 179 ERTYNELICGFCRKKNVHRAMA-LLSKML-ESRLTPSVVTYNSLIHGQCKIGYLDSAYRL 236
Query: 474 FKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
M + + P T + +D + +K + A
Sbjct: 237 LNLMNENGVVPDQWTYSVFIDTLCKKGRIEEA 268
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/298 (20%), Positives = 122/298 (40%), Gaps = 12/298 (4%)
Query: 129 GYEHSSEIYEMMVDIL---GKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWE 185
GY+ IY + G +++ + M +++ E +G + T V+ + G G
Sbjct: 384 GYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFE--RGVMPDALTYTLVIDAYGGLGLLN 441
Query: 186 DAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIH 245
A + G + + T + L+ L KE + ++V L IP + F +
Sbjct: 442 PAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNV--ALCDSIP---NVFFADVA 496
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
K+ + + A ++M HGC P + +Y+ +I C+ +L D M +G P
Sbjct: 497 DVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSP 556
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
+ Y ++++ + G + +A+R+ M G P N L L ++A V+
Sbjct: 557 SEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVF 616
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
+ + G D + +I +G + +L M + C+ + QT+ L++
Sbjct: 617 S-NLLQCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVM-EARGCQIHPQTYRMLIEG 672
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 80/155 (51%), Gaps = 4/155 (2%)
Query: 358 VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTF 417
V A V+ + MP+ G + ++ +I G ++ ++ ++M + + C P V+T+
Sbjct: 20 VNSAFSVFNM-MPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMRE-DDCYPTVRTY 77
Query: 418 HPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
++ + F++G+ E ++ L +M + +I TYT++I+ +C+ K E + EM
Sbjct: 78 TVIVHALFESGRRMEAIN-LFSEM-RERGCEPNIHTYTVMINAMCKETKLEEGRRILDEM 135
Query: 478 IGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
+ + P T ++D ++ M +AA++I +M
Sbjct: 136 VEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLM 170
>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 580
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 175/367 (47%), Gaps = 29/367 (7%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGT 196
Y ++VD L KV + D+ + L EEM ++ +E+
Sbjct: 218 YNIIVDGLCKVGREDEAKQLFEEMKTQGMIP------------------------NEMLD 253
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRVDE 255
GL+ + T N+L+DTLCKEGKV A+ + + ++S I P+ T+N I G+C + ++
Sbjct: 254 QGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNS 313
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
A+ M GC P VISY+ +I Y + + +L +EM G PNV+TY +++
Sbjct: 314 ARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLK 373
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
+ +G ++A ++ MK G +S + + L + + EA+ ++ E+ +
Sbjct: 374 GIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLF-TELKSSNFK 432
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS 435
+ N +I G E A+ + E+++ H +PNV T+ ++ + G+ D+ +
Sbjct: 433 LEIENLNCLIDGLCKAGKLETAWELFEKLSNEGH-EPNVVTYTIMIHGFCREGQVDK--A 489
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE 495
+L + + + DI TY ++ G +NK E L M D++P TC +++D
Sbjct: 490 NVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDM 549
Query: 496 VKQKHMY 502
+ + Y
Sbjct: 550 LSKDEKY 556
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 195/396 (49%), Gaps = 27/396 (6%)
Query: 107 IHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHI 165
++R ++ + + GI R GY + Y ++ L ++ + L M K G
Sbjct: 117 VNRLREGFAAFAGILRR-----GYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCT 171
Query: 166 VTLNTIAKVMRRFSGAGQWEDAVRTFDELGT------FGLEKNTETMNLLLDTLCKEGKV 219
+ T +++ G G A++ E+ + N T N+++D LCK G+
Sbjct: 172 PDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGRE 231
Query: 220 ELARSVFLELKS--CIP---------PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGC 268
+ A+ +F E+K+ IP P+ TFN+ I CK +V EA+ + M G
Sbjct: 232 DEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGI 291
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
P +++Y+++I+ +C + + EL M ++GC P+V++Y +++ +K+ EEA++
Sbjct: 292 VPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMK 351
Query: 329 ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF 388
+ +M +VG +P+ ++ L+ + A +V +A ++ V M +G+A ++ T+ +
Sbjct: 352 LYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSV-MKAHGIAENSYTYGIFLDGL 410
Query: 389 SHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
+ +A + E+ K + K ++ + L+ K GK E +L + + N+ H
Sbjct: 411 CKNDCLFEAMKLFTEL-KSSNFKLEIENLNCLIDGLCKAGKL-ETAWELFEKLSNEGH-E 467
Query: 449 LDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
++ TYT++IHG CR + + A +L ++M + TP
Sbjct: 468 PNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTP 503
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 164/347 (47%), Gaps = 25/347 (7%)
Query: 167 TLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF 226
+L++ ++ + + ++++ GL + T+N+LL+ LC ++ + F
Sbjct: 68 SLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAF 127
Query: 227 LE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQ 285
L+ PN T+N I G C +R+ EA M+ GC P V++Y T+I+ C
Sbjct: 128 AGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGT 187
Query: 286 YNFSKVYELLDEMQAQ------GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS- 338
N + +L EM C PNV+TY ++ L K G +EA ++ E+MK G
Sbjct: 188 GNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMI 247
Query: 339 ---------KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFS 389
+PD FN LI TL + +V EA + V M E+G+ PD T+N++I F
Sbjct: 248 PNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGV-MIESGIVPDLVTYNSLIEGFC 306
Query: 390 HHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDM--VNKHHL 447
G A + M + C+P+V +++ L+ KT K +E + +L ++M V K
Sbjct: 307 MVGDLNSARELFVSMPS-KGCEPDVISYNVLINGYSKTLKVEEAM-KLYNEMLLVGKRP- 363
Query: 448 SLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
++ TY ++ G+ A K + A LF M H I T + LD
Sbjct: 364 --NVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLD 408
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 133/278 (47%), Gaps = 11/278 (3%)
Query: 94 NAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMD 151
+ I P N LI F D SA +F S G E Y ++++ K +++
Sbjct: 289 SGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPS-KGCEPDVISYNVLINGYSKTLKVE 347
Query: 152 QMRALLEEM----SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN 207
+ L EM + +++T +++ K + AG+ +DA + F + G+ +N+ T
Sbjct: 348 EAMKLYNEMLLVGKRPNVITYDSLLKGIFL---AGKVDDAKKLFSVMKAHGIAENSYTYG 404
Query: 208 LLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
+ LD LCK + A +F ELKS N I G CK +++ A +++
Sbjct: 405 IFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNE 464
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
G P V++Y+ +I +CR+ K L+ +M+A GC P+++TY T+M +S EE
Sbjct: 465 GHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEV 524
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
+++ +M PD+ + ++ L + + QE +++
Sbjct: 525 VQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHL 562
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 167/359 (46%), Gaps = 27/359 (7%)
Query: 62 PRLPDIDVIISKVHVGSSEDE---VFQSLK-QDHVCN-----AIQPSHYLVNKLIHRFKD 112
P + ++I+ + EDE +F+ +K Q + N +QP N LI
Sbjct: 213 PNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCK 272
Query: 113 DWK-----SALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKG--- 163
+ K LG+ +G P Y +++ V ++ R L M SKG
Sbjct: 273 EGKVIEAKKLLGVMIESGIVPDLV----TYNSLIEGFCMVGDLNSARELFVSMPSKGCEP 328
Query: 164 HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELAR 223
+++ N + + +S + E+A++ ++E+ G N T + LL + GKV+ A+
Sbjct: 329 DVISYNVL---INGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAK 385
Query: 224 SVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSY 282
+F +K+ I N++T+ IF+ G CK + + EA E+K + + + +I
Sbjct: 386 KLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGL 445
Query: 283 CRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDS 342
C+ +EL +++ +G PNVVTYT ++ + G ++A + +KM+ G PD
Sbjct: 446 CKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDI 505
Query: 343 RFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVL 401
+N L+ +++++E V + M + V+PD T + ++ M S +++ H+L
Sbjct: 506 ITYNTLMRGFYESNKLEEVVQLLH-RMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLL 563
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 136/290 (46%), Gaps = 18/290 (6%)
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
T NI ++ C +NR+ E + G P +++Y+T+I+ C ++ S+ L M
Sbjct: 106 TLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRM 165
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKI------VGSKPDSRFFNCLIYTL 352
Q GC P+VVTY T++ L +G+ A+++ ++M + KP+ +N ++ L
Sbjct: 166 QKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGL 225
Query: 353 GRASRVQEAVYVYQV---------EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEE 403
+ R EA +++ EM + G+ PD TFN +I G +A +L
Sbjct: 226 CKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGV 285
Query: 404 MNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCR 463
M + P++ T++ L++ G + +L M +K D+ +Y ++I+G +
Sbjct: 286 MIE-SGIVPDLVTYNSLIEGFCMVGDLNSA-RELFVSMPSK-GCEPDVISYNVLINGYSK 342
Query: 464 ANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
K E A L+ EM+ P T +L + D A+K+ +VMK
Sbjct: 343 TLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMK 392
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 87/151 (57%), Gaps = 1/151 (0%)
Query: 186 DAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFI 244
+A++ F EL + + E +N L+D LCK GK+E A +F +L + PN T+ I I
Sbjct: 418 EAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMI 477
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
HG+C+ +VD+A IQ+M+ +GC P +I+Y+T+++ + +V +LL M +
Sbjct: 478 HGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVS 537
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKI 335
P+ +T + V+ L+K ++E + + + I
Sbjct: 538 PDAITCSIVVDMLSKDEKYQECLHLLPRFPI 568
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 131/317 (41%), Gaps = 25/317 (7%)
Query: 214 CKEGKVELARSVF---LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHP 270
CK G V ++ L ++S P+ +FN + G KI + +M+ G
Sbjct: 43 CKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSS 102
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRIT 330
+ + ++ C + + + +G PN+VTY T++ L EA R+
Sbjct: 103 DRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLF 162
Query: 331 EKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ-----VEMPENGVAPDTSTFNTMI 385
+M+ +G PD + LI L + A+ ++Q + E P+ T+N ++
Sbjct: 163 LRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIV 222
Query: 386 TMFSHHGHHEKAFHVLEEM-------NKL--EHCKPNVQTFHPLLKSCFKTGKTDECLSQ 436
G ++A + EEM N++ + +P++ TF+ L+ + K GK E +
Sbjct: 223 DGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEA-KK 281
Query: 437 LLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV 496
LL M+ + + D+ TY +I G C A LF M P + ++++
Sbjct: 282 LLGVMI-ESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLING- 339
Query: 497 KQKHMYDAAEKIEAVMK 513
Y K+E MK
Sbjct: 340 -----YSKTLKVEEAMK 351
>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 641
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 159/318 (50%), Gaps = 10/318 (3%)
Query: 162 KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVEL 221
K ++V NT V++ A +WE+A E+ + T N+L+D C+ G V+
Sbjct: 315 KPNVVCYNT---VLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDR 371
Query: 222 ARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
+ ++ CIP + T+ I+G+CK VDEA ++ M GC P ISY+ ++
Sbjct: 372 VIELLEQMLEHGCIP-DVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVL 430
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
+ CR + EL+ M QGC PN VT+ T+++++ K G E+AI + ++M + G
Sbjct: 431 KGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCS 490
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
PD ++ +I LG+A + +EA+ + V M G+ P+T +++M + S G +K
Sbjct: 491 PDLISYSTVIDGLGKAGKTEEALELLNV-MINKGITPNTIIYSSMASALSREGRTDKIIQ 549
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIH 459
+ + + + + ++ ++ S K +TD + MV+ + + +TYT++I
Sbjct: 550 MFDSIQD-ATVRSDAALYNAVISSLCKRWETDRAI-DFFAYMVSNGCMP-NESTYTILIR 606
Query: 460 GLCRANKCEWAYLLFKEM 477
GL A L E+
Sbjct: 607 GLASEGLVREAQDLLSEL 624
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 169/353 (47%), Gaps = 8/353 (2%)
Query: 156 LLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLC 214
+L+EM +G T ++ G + AVR L G ++ NL++ +C
Sbjct: 130 VLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAIC 189
Query: 215 KEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI 273
++G V+ + +L S P+ ++N + G C R D+ + + EM GC P V
Sbjct: 190 EQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVA 249
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
+++T+I CR F +V+E L +M GC P++ Y T++ + K G E A I +M
Sbjct: 250 TFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRM 309
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
G KP+ +N ++ L A R +EA + EM + D TFN ++ F +G
Sbjct: 310 PSYGLKPNVVCYNTVLKGLCSAERWEEAEDLL-AEMFQEDCPLDDVTFNILVDFFCQNGL 368
Query: 394 HEKAFHVLEEMNKLEH-CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
++ +LE+M LEH C P+V T+ ++ K G DE + LL +M + +
Sbjct: 369 VDRVIELLEQM--LEHGCIPDVITYTTVINGFCKEGLVDEAV-MLLKNM-SACGCKPNTI 424
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
+YT+V+ GLCRA + A L MI P T +++ + +K + + A
Sbjct: 425 SYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQA 477
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 162/344 (47%), Gaps = 8/344 (2%)
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKS 231
++R G DA+ DE+ G +++L+ C+ G A L K
Sbjct: 114 IVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKG 173
Query: 232 CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKV 291
C + + N+ + C+ VDE ++++ GC P ++SY+ +++ C + V
Sbjct: 174 CTLDSGNC-NLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDV 232
Query: 292 YELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYT 351
EL+ EM GCPPNV T+ T+++YL ++G FE+ +M G PD R + +I
Sbjct: 233 EELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDG 292
Query: 352 LGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCK 411
+ + + A + MP G+ P+ +NT++ E+A +L EM + E C
Sbjct: 293 ICKDGHHEVANDILS-RMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQ-EDCP 350
Query: 412 PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAY 471
+ TF+ L+ + G D + +LL+ M+ +H D+ TYT VI+G C+ + A
Sbjct: 351 LDDVTFNILVDFFCQNGLVDRVI-ELLEQML-EHGCIPDVITYTTVINGFCKEGLVDEAV 408
Query: 472 LLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEAVMKK 514
+L K M P + ++L + + + DA E I ++++
Sbjct: 409 MLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQ 452
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 146/334 (43%), Gaps = 11/334 (3%)
Query: 171 IAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK 230
++ ++R AG+ DA R D T G N ++ C+ G+V AR + +
Sbjct: 47 LSALIRSLCAAGRTADAARALD---TAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVP 103
Query: 231 SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSK 290
+PPNA+T+ + C + +A + EM GC I+++ CR F
Sbjct: 104 --VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRS 161
Query: 291 VYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIY 350
L + A+GC + V+S + + G +E + + K+ G +PD +N ++
Sbjct: 162 AVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLK 221
Query: 351 TLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH- 409
L A R + V VEM G P+ +TFNT+I +G E+ L +M EH
Sbjct: 222 GLCMAKRWDD-VEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMP--EHG 278
Query: 410 CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEW 469
C P+++ + ++ K G E + +L M + L ++ Y V+ GLC A + E
Sbjct: 279 CTPDLRMYATIIDGICKDGH-HEVANDILSRM-PSYGLKPNVVCYNTVLKGLCSAERWEE 336
Query: 470 AYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYD 503
A L EM D T +++D Q + D
Sbjct: 337 AEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVD 370
>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 493
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/403 (25%), Positives = 194/403 (48%), Gaps = 7/403 (1%)
Query: 114 WKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIA 172
+++ + +FR G H + ++D + ++ + L +M K G ++ T
Sbjct: 89 YEAVISLFRHI-EILGISHDLYSFSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFG 147
Query: 173 KVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KS 231
++ F + ++A+ D++ G E N N ++D+LC+ +V+ A V + K
Sbjct: 148 SLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKM 207
Query: 232 CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKV 291
I P+ T+N I + + + +M G HP VI++S +I + ++ +
Sbjct: 208 GIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEA 267
Query: 292 YELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYT 351
+ DEM + PN+VTY ++++ L G +EA ++ M G P++ +N L+
Sbjct: 268 KKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNG 327
Query: 352 LGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCK 411
++ RV +A+ + V M +GV DT T+NT+ + G A VL M
Sbjct: 328 YCKSKRVDDAMKILCV-MSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSC-GVL 385
Query: 412 PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAY 471
P++ TF+ LL + GK ++ L +L D + K + I TY ++I G+C+ANK E A+
Sbjct: 386 PDIYTFNMLLDGLCEHGKIEKALVKLED--LQKSETVVGIITYNIIIKGMCKANKVEDAW 443
Query: 472 LLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
LF + ++P T ++ +++K ++ A ++ MKK
Sbjct: 444 YLFCSLALKGVSPDVITYTTMMIGLRRKRLWLEAHELYRKMKK 486
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 153/313 (48%), Gaps = 5/313 (1%)
Query: 183 QWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFN 241
++E + F + G+ + + + L+D C+ ++ LA S ++ K P+ TF
Sbjct: 88 KYEAVISLFRHIEILGISHDLYSFSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFG 147
Query: 242 IFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ 301
++G+C +NR+ EA + ++ G G P V+ Y+TII S C ++L+ M+
Sbjct: 148 SLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKM 207
Query: 302 GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
G P+V+TY ++++ L SG + + RI M +G PD F+ +I G+ ++ EA
Sbjct: 208 GIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEA 267
Query: 362 VYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLL 421
Y EM + V P+ T+N++I HG ++A VL M + PN T++ L+
Sbjct: 268 KKQYD-EMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVS-KGFFPNAVTYNTLV 325
Query: 422 KSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHD 481
K+ + D+ + L +++ + D TY + G C+A + A + M+
Sbjct: 326 NGYCKSKRVDDAMKILC--VMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCG 383
Query: 482 ITPRYQTCRLILD 494
+ P T ++LD
Sbjct: 384 VLPDIYTFNMLLD 396
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 109/245 (44%), Gaps = 8/245 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK----GHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
+ M+D+ GK Q+ + + +EM + +IVT N++ + G ++A + +
Sbjct: 251 FSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSL---INGLCIHGLLDEAKKVLN 307
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKIN 251
+ + G N T N L++ CK +V+ A + + + + T+N G+C+
Sbjct: 308 FMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAG 367
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
+ + A+ + M G P + +++ ++ C K L+++Q ++TY
Sbjct: 368 QFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYN 427
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
++ + K+ E+A + + + G PD + ++ L R EA +Y+ +
Sbjct: 428 IIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGLRRKRLWLEAHELYRKMKKD 487
Query: 372 NGVAP 376
+G+ P
Sbjct: 488 DGLMP 492
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 176/350 (50%), Gaps = 15/350 (4%)
Query: 145 GKVRQ-MDQMRALLEEMSKGHIVTLN-TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKN 202
G+V+ +D MR + E +G I T V+ + G+ ++AV+ FDE+ T G K
Sbjct: 528 GRVQAALDIMREMRE---RGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKP 584
Query: 203 TETM-NLLLDTLCKEGKVELA---RSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQW 258
M N L+ C +GK++ A R +E + T+N+ +H R EA
Sbjct: 585 EAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAM--TVATYNLLVHALFMDGRGTEAYE 642
Query: 259 TIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLA 318
++EM G G P V +Y+ +I +C++ N K E+ + M +G VVTYT ++ L+
Sbjct: 643 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALS 702
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDT 378
K G +E ++ ++ G +PD +N LI + + + A + EM + +APD
Sbjct: 703 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMG-EMEKKRIAPDD 761
Query: 379 STFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLL 438
T+NT++ G ++A +++EM + +P++ T++ L+ G + L ++
Sbjct: 762 VTYNTLMRGLCLLGRVDEARKLIDEMTE-RGIQPDLVTYNTLISGYSMKGDVKDAL-RIR 819
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
++M+NK + + TY +I GLC+ + + A + KEM+ + ITP T
Sbjct: 820 NEMMNK-GFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDST 868
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 171/393 (43%), Gaps = 47/393 (11%)
Query: 155 ALLEEMSKGHIVTLNTIAKVM-RRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTL 213
AL +M + + T +M R AG+ A+ ++ N T N ++
Sbjct: 469 ALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGF 524
Query: 214 CKEGKVELARSVFLELK--SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG-CHP 270
C G+V+ A + E++ I PN +T+ I GWCK+ RVDEA EM G P
Sbjct: 525 CSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKP 584
Query: 271 CVISYSTIIQSYCRQ------------------------YNF-----------SKVYELL 295
+ Y+ +I YC Q YN ++ YEL+
Sbjct: 585 EAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELV 644
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
+EM +G P+V TY +++ K G+ ++A+ I E M G + + LIY L +
Sbjct: 645 EEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKK 704
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQ 415
+VQE ++ E G+ PD +N +I S G+ ++AF ++ EM K + P+
Sbjct: 705 GQVQETDKLFD-EAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEK-KRIAPDDV 762
Query: 416 TFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFK 475
T++ L++ G+ DE +L+D+M + + D+ TY +I G + A +
Sbjct: 763 TYNTLMRGLCLLGRVDEA-RKLIDEMTERG-IQPDLVTYNTLISGYSMKGDVKDALRIRN 820
Query: 476 EMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
EM+ P T ++ + + D AE +
Sbjct: 821 EMMNKGFNPTLLTYNALIQGLCKNGQGDDAENM 853
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 145/309 (46%), Gaps = 6/309 (1%)
Query: 81 DEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWK--SALGIFRWAGSCPGYEHSSEIYE 138
DE + + ++P + N LI + D K +AL ++R G + Y
Sbjct: 567 DEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTAL-LYRDRMVERGVAMTVATYN 625
Query: 139 MMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTF 197
++V L + + L+EEM KG + T ++ G + A+ F+ +
Sbjct: 626 LLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRR 685
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEA 256
G+ T L+ L K+G+V+ +F E ++ I P+ +N I+ +D A
Sbjct: 686 GVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRA 745
Query: 257 QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSY 316
+ EM+ P ++Y+T+++ C + +L+DEM +G P++VTY T++S
Sbjct: 746 FEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISG 805
Query: 317 LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
+ GD ++A+RI +M G P +N LI L + + +A + + EM ENG+ P
Sbjct: 806 YSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVK-EMVENGITP 864
Query: 377 DTSTFNTMI 385
D ST+ ++I
Sbjct: 865 DDSTYISLI 873
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 114/248 (45%), Gaps = 10/248 (4%)
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRIT 330
C +++ +++ C ++ ELL +M PN VTY TV++ G + A+ I
Sbjct: 482 CTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIM 537
Query: 331 EKMKIVGS-KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFS 389
+M+ G P+ + +I + RV EAV V+ + + V P+ +N +I +
Sbjct: 538 REMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYC 597
Query: 390 HHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSL 449
G + A + M + V T++ L+ + F G+ E +L+++M K L+
Sbjct: 598 DQGKLDTALLYRDRMVE-RGVAMTVATYNLLVHALFMDGRGTEAY-ELVEEMGGKG-LAP 654
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI- 508
D+ TY ++I+G C+ + A +F+ M + T ++ + +K +K+
Sbjct: 655 DVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLF 714
Query: 509 -EAVMKKL 515
EAV + +
Sbjct: 715 DEAVRRGI 722
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 104/227 (45%), Gaps = 7/227 (3%)
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
+ + L +M P T+ ++ +L +G A+ + +M +P++ +N +
Sbjct: 465 APAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTV 520
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
I RVQ A+ + + G+AP+ T+ T+I+ + G ++A V +EM
Sbjct: 521 IAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKG 580
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
KP ++ L+ GK D L L D + + +++ + TY L++H L +
Sbjct: 581 EVKPEAVMYNALIGGYCDQGKLDTAL--LYRDRMVERGVAMTVATYNLLVHALFMDGRGT 638
Query: 469 WAYLLFKEMIGHDITPRYQTCRLILD-EVKQKHMYDAAEKIEAVMKK 514
AY L +EM G + P T ++++ K+ ++ A E E + ++
Sbjct: 639 EAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRR 685
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 99/227 (43%), Gaps = 5/227 (2%)
Query: 95 AIQPSHYLVNKLI--HRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQ 152
+ P + N LI H + + K AL IF S G + Y ++ L K Q+ +
Sbjct: 651 GLAPDVFTYNILINGHCKEGNVKKALEIFENM-SRRGVRATVVTYTALIYALSKKGQVQE 709
Query: 153 MRALLEE-MSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLD 211
L +E + +G L ++ S +G + A E+ + + T N L+
Sbjct: 710 TDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMR 769
Query: 212 TLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHP 270
LC G+V+ AR + E+ + I P+ T+N I G+ V +A EM G +P
Sbjct: 770 GLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNP 829
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
+++Y+ +IQ C+ ++ EM G P+ TY +++ L
Sbjct: 830 TLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 876
>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
Length = 687
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 108/447 (24%), Positives = 204/447 (45%), Gaps = 48/447 (10%)
Query: 77 GSSEDEVFQSLKQDHVCNAIQPSHYLVNKLI--HRFKDDWKSALGIFRWAGSCPGYEHSS 134
G EVF + + A+ P+H N +I H D ++ + R C G + ++
Sbjct: 212 GGDAVEVFDEMTE----RAVLPNHITYNTMIDGHIKGGDLEAGFSL-RDQMVCHGLKPNA 266
Query: 135 EIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLN-TIAKVMRRFSGAGQWEDAVRTFDE 193
Y +++ L + +M + ALL+EM+ +V T + + S G + + F +
Sbjct: 267 ITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGK 326
Query: 194 LGTFGLEKNTETMNLLLDTLCKEGKVELAR------------------------------ 223
G+ T ++LL+ LCK+GKV +A
Sbjct: 327 SLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGE 386
Query: 224 -----SVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
S F ++KS I P+ T+N I+G CK R+ AQ + EM+ +G +P V +++T
Sbjct: 387 LEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNT 446
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+I +Y R K + +L EMQ G PNVV+Y ++++ K+G EA+ I + M
Sbjct: 447 LIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKD 506
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKA 397
P+++ +N +I +A ++ +M NG++P T+N +I + +A
Sbjct: 507 VLPNAQVYNAIIDAYVEHGPNDQA-FILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEA 565
Query: 398 FHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLV 457
++ ++ P+ +++ L+ +C G D+ L L ++K+ + + TY +
Sbjct: 566 EEIINSLSN-HRLIPDAVSYNTLISACCYRGNIDKALD--LQQRMHKYGIKSTVRTYHQL 622
Query: 458 IHGLCRANKCEWAYLLFKEMIGHDITP 484
I GL A + L+++M+ +++ P
Sbjct: 623 ISGLGGAGRLIEMEYLYQKMMQNNVVP 649
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 112/448 (25%), Positives = 181/448 (40%), Gaps = 87/448 (19%)
Query: 113 DWKSALGIFRWAGSCPGYEHSSEIYEMMV------DILGKVRQMDQMRALLEEMSKGHIV 166
D + A GI AG+ P ++ + V + +G +R+M + + +
Sbjct: 143 DVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGR-----DGAPPPNAF 197
Query: 167 TLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF 226
+ N + M R AG+ DAV FDE+ + N T N ++D K G +E S+
Sbjct: 198 SYNVVIAGMWR---AGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLR 254
Query: 227 LELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTI------- 278
++ + PNA T+N+ + G C+ R+ E + EM P +YS +
Sbjct: 255 DQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRN 314
Query: 279 ----------------------------IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
+ C+ S E+L + G P V Y
Sbjct: 315 GDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIY 374
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
T+++ ++G+ E A +MK KPD +N LI L +A R+ A + +EM
Sbjct: 375 NTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLL-MEMQ 433
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKT 430
+NGV P TFNT+I + G EK F VL EM + KPNV ++ ++ + K GK
Sbjct: 434 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQE-NGLKPNVVSYGSIVNAFCKNGKI 492
Query: 431 DECLSQLLDDMVNK----------------------------------HHLSLDITTYTL 456
E ++ +LDDM +K + +S I TY L
Sbjct: 493 PEAVA-ILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNL 551
Query: 457 VIHGLCRANKCEWAYLLFKEMIGHDITP 484
+I GLC ++ A + + H + P
Sbjct: 552 LIKGLCNQSQISEAEEIINSLSNHRLIP 579
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 160/335 (47%), Gaps = 18/335 (5%)
Query: 78 SSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEI- 136
S +EV QSL V + P+ + N LI+ + G A S G S I
Sbjct: 353 SIAEEVLQSL----VNAGLVPTRVIYNTLINGY-----CQTGELEGAFSTFGQMKSRHIK 403
Query: 137 -----YEMMVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDAVRT 190
Y +++ L K ++ + LL EM + T+ T ++ + GQ E
Sbjct: 404 PDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIV 463
Query: 191 FDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCK 249
E+ GL+ N + +++ CK GK+ A ++ ++ + PNA +N I + +
Sbjct: 464 LSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVE 523
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
D+A +++MK +G P +++Y+ +I+ C Q S+ E+++ + P+ V+
Sbjct: 524 HGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVS 583
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM 369
Y T++S G+ ++A+ + ++M G K R ++ LI LG A R+ E Y+YQ +M
Sbjct: 584 YNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQ-KM 642
Query: 370 PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
+N V P + N M+ +S +G+ KA + +EM
Sbjct: 643 MQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEM 677
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 131/315 (41%), Gaps = 6/315 (1%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHT 239
G+ D R F L + G +T N + G + A + + PPNA +
Sbjct: 139 GRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFS 198
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+N+ I G + R +A EM P I+Y+T+I + + + + L D+M
Sbjct: 199 YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMV 258
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
G PN +TY ++S L ++G E + ++M PD ++ L L R +
Sbjct: 259 CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSK 318
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
+ ++ + +NGV T + ++ G A VL+ + P ++
Sbjct: 319 AMLSLFGKSL-KNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVN-AGLVPTRVIYNT 376
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
L+ +TG+ + S + H+ D TY +I+GLC+A + A L EM
Sbjct: 377 LINGYCQTGELEGAFSTF--GQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQD 434
Query: 480 HDITPRYQTCRLILD 494
+ + P +T ++D
Sbjct: 435 NGVNPTVETFNTLID 449
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/325 (30%), Positives = 160/325 (49%), Gaps = 12/325 (3%)
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFI 244
++AV+ F EL EKNT + N+LL LC G+++ A +F E+ S PP+ T+ I +
Sbjct: 239 DEAVQLFQELP----EKNTCSYNILLKALCTAGRIKDAHQLFDEMAS--PPDVVTYGIMV 292
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
HG+C ++ ++ A + EM G ++Y+++I C + S ++++M G
Sbjct: 293 HGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVV 352
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
+ +TTVMS + GD A ++M+ G D + LI L RA ++EA V
Sbjct: 353 LDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERV 412
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
Q EM + G+ D T+ +I + G +AF V +M + + PNV T+ L
Sbjct: 413 LQ-EMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQ-KRVTPNVVTYTALSDGL 470
Query: 425 FKTGKTDECLS-QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
K G D C + +LL +M +K L L+I TY +I+GLC+A E A +M +
Sbjct: 471 CKQG--DVCAANELLHEMCSK-GLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLK 527
Query: 484 PRYQTCRLILDEVKQKHMYDAAEKI 508
P T I+ + Q D A +
Sbjct: 528 PDVYTYTTIIGALCQSKELDRAHSL 552
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 186/389 (47%), Gaps = 8/389 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQM-DQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G E + Y ++ +L Q+ D +R + + + G ++ VM F G A
Sbjct: 315 GLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAA 374
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHG 246
FDE+ GL + T L++ LC+ G+++ A V E++ + +A T+ + I G
Sbjct: 375 RNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDG 434
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
+CK+ ++ EA +M P V++Y+ + C+Q + ELL EM ++G N
Sbjct: 435 YCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELN 494
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
+ TY ++++ L K+G+ E+A+R M G KPD + +I L ++ + A + Q
Sbjct: 495 IFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQ 554
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS-CF 425
EM + G+ P T+N ++ F G E +LE M + ++ PN T++ L+K C
Sbjct: 555 -EMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLE-KNIHPNTTTYNSLMKQYCI 612
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
+ K + +++ M+++ + + TY ++I G C+A + A EMI
Sbjct: 613 E--KNMKSTTEIYKGMLSQEVVP-NENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLT 669
Query: 486 YQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
+ ++ + +K + A ++ M+K
Sbjct: 670 ASSYNALIRLLNKKKKFTEARRLFEKMRK 698
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 181/372 (48%), Gaps = 9/372 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIA--KVMRRFSGAGQWEDAVRTFDEL 194
Y +MV + +++ LL EM+ + LN +A V+ GQ DAVR +++
Sbjct: 288 YGIMVHGYCTLSELETAIKLLSEMA-ARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDM 346
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRV 253
G+ + ++ C++G + AR+ F E+ K + + T+ I+G C+ +
Sbjct: 347 VMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGEL 406
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
EA+ +QEM+ G ++Y+ +I YC+ ++ + + ++M + PNVVTYT +
Sbjct: 407 KEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTAL 466
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
L K GD A + +M G + + +N LI L +A +++A+ ++M E G
Sbjct: 467 SDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRT-MIDMDEAG 525
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
+ PD T+ T+I ++A +L+EM + KP + T++ L+ +G+ E
Sbjct: 526 LKPDVYTYTTIIGALCQSKELDRAHSLLQEMLD-KGIKPTIVTYNVLMNGFCMSGRV-EG 583
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCR-LI 492
+LL+ M+ K ++ + TTY ++ C + ++K M+ ++ P T LI
Sbjct: 584 GKRLLEWMLEK-NIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILI 642
Query: 493 LDEVKQKHMYDA 504
K ++M +A
Sbjct: 643 KGHCKARNMKEA 654
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 89/184 (48%), Gaps = 4/184 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ L + +++D+ +LL+EM KG T+ T +M F +G+ E R + +
Sbjct: 533 YTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWML 592
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVD 254
+ NT T N L+ C E ++ ++ + S + PN +T+NI I G CK +
Sbjct: 593 EKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMK 652
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ--GCPPNVVTYTT 312
EA + EM G SY+ +I+ ++ F++ L ++M+ + P+V +
Sbjct: 653 EALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYI 712
Query: 313 VMSY 316
+S+
Sbjct: 713 DLSF 716
>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 770
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 161/336 (47%), Gaps = 3/336 (0%)
Query: 160 MSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV 219
M +G + + +++ F +G A+ F + L + + N +++ LCK ++
Sbjct: 121 MKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRL 180
Query: 220 ELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTI 278
A+ +F E+K PN+ TF+ I G+CK V+E ++EM+ G V YS +
Sbjct: 181 VEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSAL 240
Query: 279 IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
I +C + + + EL +EM + PNVVTY+ +M+ L K ++EA ++ + M
Sbjct: 241 ISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKV 300
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
+PD + L L + R +A+ V + M + G P+ T+N +I G + A
Sbjct: 301 RPDVVAYTVLADGLSKNGRASDAIKVLDL-MVKRGEEPNNVTYNAIINGLCKEGRVDDAL 359
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
+LE M K + KP+V T+ L+K GK DE + L M + H+ D+ + LVI
Sbjct: 360 GILETMAK-KGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVI 418
Query: 459 HGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
LC+ + A ++ M+ T +++D
Sbjct: 419 QELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILID 454
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 172/397 (43%), Gaps = 43/397 (10%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLN-TIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +++ L K +++ + + L +EM G + T + ++ F G E+ +E+
Sbjct: 167 YNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEME 226
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVD 254
GLE + + L+ C +G +E + +F E L+ + PN T++ ++ CK +
Sbjct: 227 KMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWK 286
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA + M G P V++Y+ + + S ++LD M +G PN VTY ++
Sbjct: 287 EAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAII 346
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP-ENG 373
+ L K G ++A+ I E M G KPD ++ L+ L ++ EAV + + M E
Sbjct: 347 NGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFH 406
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP-NVQTFHPLLKSCFKTGKTDE 432
+ PD FN +I A V M +E P N+ T++ L+ GK +
Sbjct: 407 IKPDVFAFNLVIQELCKQRRLRHAKRVYYTM--VERGFPSNIVTYNILIDGYLSAGKLTK 464
Query: 433 CLSQLLDDMVNKHHLSLDITTYTLVIHGLC------------------------------ 462
L +L D V+ +S + TYT++I+GLC
Sbjct: 465 AL-ELWKDAVDSG-ISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTL 522
Query: 463 -----RANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
R + E A LF+EM + P + +I+D
Sbjct: 523 MASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIID 559
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 163/342 (47%), Gaps = 8/342 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
G E ++ Y +++ L K ++D +LE M+K G + T + +++ G G+ ++A
Sbjct: 334 GEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEA 393
Query: 188 VRTFDELGT--FGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFI 244
V + L + F ++ + NL++ LCK+ ++ A+ V+ + + P N T+NI I
Sbjct: 394 VDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILI 453
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
G+ ++ +A ++ G P +Y+ +I C+ S L ++ +A G
Sbjct: 454 DGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTR 513
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
P V Y T+M+ L + E+A + ++M+ PD FN +I +A V+ A +
Sbjct: 514 PTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKEL 573
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
+ N V PD TF+ +I F G ++A + E M H P+ F LLK
Sbjct: 574 LLEMLNMNLV-PDNITFSILINRFLKLGQLDEAASLYERMVSCGHV-PDAVLFDSLLKGY 631
Query: 425 FKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANK 466
GKT++ +S +L M +K + LD + ++ LC +K
Sbjct: 632 SLKGKTEKVVS-MLQQMADK-DVVLDSKLTSTILACLCNMSK 671
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 129/281 (45%), Gaps = 5/281 (1%)
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYEL 294
P+ + N I K D +M PC S S +I+S+ S + +
Sbjct: 57 PSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGV 116
Query: 295 LDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGR 354
L + +G NV + ++ +SGD +A+ + MK PD +N +I L +
Sbjct: 117 LGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCK 176
Query: 355 ASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNV 414
R+ EA +++ EM P++ TF+ +I F +G E+ F +LEEM K+ + +V
Sbjct: 177 GKRLVEAKELFK-EMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKM-GLEGDV 234
Query: 415 QTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLF 474
+ L+ G + +L ++M+ K+ ++ ++ TY+ +++ LC+ K + A +
Sbjct: 235 FVYSALISGFCSKGDIERG-KELFNEMLRKN-VTPNVVTYSCLMNALCKKQKWKEAAQML 292
Query: 475 KEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEAVMKK 514
M G + P ++ D + K DA + ++ ++K+
Sbjct: 293 DTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKR 333
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 169/331 (51%), Gaps = 8/331 (2%)
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFL--ELKSCIPPNAHTFNIFI 244
++ F E G+ NTE+ N+L+++L + GK+ A + + E K CIP + ++ I
Sbjct: 94 VLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIP-DVVSYTTII 152
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
G+C + + + ++EM+ G P + +YS+II C+ + ++L EM +G
Sbjct: 153 DGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVF 212
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
P+ V YTT++ K G+ + A ++ +M+ PDS F+ LI L + +V EA +
Sbjct: 213 PDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKL 272
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
+ EM + G PD T+ +I + G +KAF + +M ++ PNV T+ L
Sbjct: 273 FN-EMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQI-GLTPNVVTYTALADGL 330
Query: 425 FKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
K+G+ D ++LL +M K L L+I+TY +++GLC+A A L +EM + P
Sbjct: 331 CKSGELDTA-NELLHEMCRKG-LQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHP 388
Query: 485 RYQTCRLILDE-VKQKHMYDAAEKIEAVMKK 514
T ++D K M A E + ++ +
Sbjct: 389 DTITYTTLMDAYYKTGEMVKARELLREMLDR 419
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 110/433 (25%), Positives = 190/433 (43%), Gaps = 42/433 (9%)
Query: 82 EVFQSLKQDHVCNAIQPSHYLVNKLIHRFK-DDWKSALGIFRWAGSCPGYEHSSEIYEMM 140
+VF Q VC + + L+N L K + L + G P Y +
Sbjct: 96 KVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVS----YTTI 151
Query: 141 VDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGL 199
+D V ++ ++ L++EM KG L T + ++ +G+ + + E+ G+
Sbjct: 152 IDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGV 211
Query: 200 EKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQW 258
+ L+D CK G + A +F E+++ I P++ F+ I G +V EA
Sbjct: 212 FPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADK 271
Query: 259 TIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLA 318
EM G P ++Y+ +I YC+ K + L ++M G PNVVTYT + L
Sbjct: 272 LFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLC 331
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDT 378
KSG+ + A + +M G + + +N ++ L +A + +AV + + EM E G+ PDT
Sbjct: 332 KSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLME-EMKEAGLHPDT 390
Query: 379 STFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE---CLS 435
T+ T++ + G KA +L EM +P V TF+ L+ +GK ++ L
Sbjct: 391 ITYTTLMDAYYKTGEMVKARELLREMLD-RGLQPTVVTFNVLMNGLCMSGKLEDGERLLK 449
Query: 436 QLLDDMV-----------------NKHHLSLDI-------------TTYTLVIHGLCRAN 465
+L+ + N +S +I TY ++I G C+A
Sbjct: 450 WMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKAR 509
Query: 466 KCEWAYLLFKEMI 478
+ A+ L KEM+
Sbjct: 510 NMKEAWFLHKEMV 522
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 102/410 (24%), Positives = 182/410 (44%), Gaps = 42/410 (10%)
Query: 133 SSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTF 191
++E Y ++++ L ++ ++ + LL M KG I + + ++ + G+ + V+
Sbjct: 109 NTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLV 168
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKI 250
E+ GL+ N T + ++ LCK GKV V E +K + P+ + I G+CK+
Sbjct: 169 KEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKL 228
Query: 251 -----------------------------------NRVDEAQWTIQEMKGHGCHPCVISY 275
+V EA EM G P ++Y
Sbjct: 229 GNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTY 288
Query: 276 STIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKI 335
+ +I YC+ K + L ++M G PNVVTYT + L KSG+ + A + +M
Sbjct: 289 TALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCR 348
Query: 336 VGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHE 395
G + + +N ++ L +A + +AV + + EM E G+ PDT T+ T++ + G
Sbjct: 349 KGLQLNISTYNTIVNGLCKAGNILQAVKLME-EMKEAGLHPDTITYTTLMDAYYKTGEMV 407
Query: 396 KAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYT 455
KA +L EM +P V TF+ L+ +GK ++ +LL M+ K + + TY
Sbjct: 408 KARELLREMLD-RGLQPTVVTFNVLMNGLCMSGKLEDG-ERLLKWMLEKGIMP-NAATYN 464
Query: 456 LVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCR-LILDEVKQKHMYDA 504
++ C N + +++ M + P T LI K ++M +A
Sbjct: 465 SIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEA 514
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 148/300 (49%), Gaps = 10/300 (3%)
Query: 145 GKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTE 204
GKV + D++ E + KG T ++ + G+ + A +++ GL N
Sbjct: 264 GKVVEADKL--FNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVV 321
Query: 205 TMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
T L D LCK G+++ A + E+ + + N T+N ++G CK + +A ++EM
Sbjct: 322 TYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEM 381
Query: 264 KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF 323
K G HP I+Y+T++ +Y + K ELL EM +G P VVT+ +M+ L SG
Sbjct: 382 KEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKL 441
Query: 324 EEAIRITEKMKIVGSKPDSRFFNCLI--YTLGRASRVQEAVYVYQVEMPENGVAPDTSTF 381
E+ R+ + M G P++ +N ++ Y + R+ +Y M GV PD++T+
Sbjct: 442 EDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIY---RGMCAQGVVPDSNTY 498
Query: 382 NTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDM 441
N +I + ++A+ + +EM + + +++ L+K FK K E QL ++M
Sbjct: 499 NILIKGHCKARNMKEAWFLHKEMVE-KRFNLTASSYNALIKGFFKRKKLLEA-RQLFEEM 556
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 99/224 (44%), Gaps = 4/224 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKG--HIVTLNTIAKVMRRFSGAGQWED 186
G + + Y +V+ L K + Q L+EEM + H T+ T +M + G+
Sbjct: 350 GLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTI-TYTTLMDAYYKTGEMVK 408
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELA-RSVFLELKSCIPPNAHTFNIFIH 245
A E+ GL+ T N+L++ LC GK+E R + L+ I PNA T+N +
Sbjct: 409 ARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMK 468
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
+C N + + + M G P +Y+ +I+ +C+ N + + L EM +
Sbjct: 469 QYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNL 528
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
+Y ++ K EA ++ E+M+ G + +N +
Sbjct: 529 TASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFV 572
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 91/198 (45%), Gaps = 2/198 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++D K +M + R LL EM +G T+ T +M +G+ ED R +
Sbjct: 393 YTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWML 452
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
G+ N T N ++ C + ++ ++ + + P+++T+NI I G CK +
Sbjct: 453 EKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMK 512
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA + +EM + SY+ +I+ + ++ + +L +EM+ +G + Y +
Sbjct: 513 EAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFV 572
Query: 315 SYLAKSGDFEEAIRITEK 332
+ G+ E + + ++
Sbjct: 573 DMNYEEGNMETTLELCDE 590
>gi|255584056|ref|XP_002532772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527482|gb|EEF29611.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 647
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 190/413 (46%), Gaps = 41/413 (9%)
Query: 117 ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVM 175
A+ F WAG Y H+ E Y ++D+L +D ++++ + + G I+T+ + ++
Sbjct: 127 AIRFFTWAGKQKKYTHNLECYVSLIDVLATNGVLDSVKSVFSKFKEMGLIMTVYSSNSLI 186
Query: 176 RRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IP 234
+ F G E+ + + + G+E + + N L++ L +E A VF +++ I
Sbjct: 187 KSFGNLGMVEEVLWVWRRMKENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVMENGKIG 246
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQS------------- 281
P+ T+N I G+C++ + +A ++ M+ P I+Y T+IQ+
Sbjct: 247 PDVVTYNTMIKGYCEVGKTRKAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSCLGL 306
Query: 282 ----------------------YCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK 319
C+ + Y + + M ++GC NV YT ++ AK
Sbjct: 307 YHEMDEKGLEIPPHVYSLVIGGLCKDGKRVEGYTVFENMISKGCKANVAIYTALIDSNAK 366
Query: 320 SGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTS 379
G+ EA+ + ++MK G +PD + ++ +L ++ R+ EA+ Y GVA +
Sbjct: 367 CGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALE-YMEFCSGKGVAVNAM 425
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLD 439
++++I G ++A + EM K + C P+ ++ L+ + K GK DE L+ L
Sbjct: 426 FYSSLIDGLGKSGRVDEAERIFYEMVK-KGCPPDSYCYNALIDALAKCGKIDEALA--LS 482
Query: 440 DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLI 492
+ + TYT++I GL R ++ E A L+ MI ITP R +
Sbjct: 483 KRMEVDGCDQTVYTYTILITGLFREHRNEEALTLWDLMIDKGITPTAAAFRAL 535
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 131/310 (42%), Gaps = 9/310 (2%)
Query: 202 NTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTI 260
N E L+D L G ++ +SVF + K + ++ N I + + V+E W
Sbjct: 143 NLECYVSLIDVLATNGVLDSVKSVFSKFKEMGLIMTVYSSNSLIKSFGNLGMVEEVLWVW 202
Query: 261 QEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKS 320
+ MK +G P + SY+ ++ + + M+ P+VVTY T++ +
Sbjct: 203 RRMKENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVMENGKIGPDVVTYNTMIKGYCEV 262
Query: 321 GDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTST 380
G +A + M++ PD + LI + +Y EM E G+
Sbjct: 263 GKTRKAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSCLGLYH-EMDEKGLEIPPHV 321
Query: 381 FNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDD 440
++ +I G + + V E M + CK NV + L+ S K G E + LL
Sbjct: 322 YSLVIGGLCKDGKRVEGYTVFENMIS-KGCKANVAIYTALIDSNAKCGNMGEAM--LLFK 378
Query: 441 MVNKHHLSLDITTYTLVIHGLCRANKCEWA--YLLFKEMIGHDITPRYQTCRLILDEVKQ 498
+ K L D TY ++++ LC++ + + A Y+ F G + + + ++D + +
Sbjct: 379 RMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAMFYSS--LIDGLGK 436
Query: 499 KHMYDAAEKI 508
D AE+I
Sbjct: 437 SGRVDEAERI 446
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 111/236 (47%), Gaps = 5/236 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
G + + IY ++D K M + L + M K G T ++ +G+ ++A
Sbjct: 349 GCKANVAIYTALIDSNAKCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEA 408
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIH 245
+ + G+ N + L+D L K G+V+ A +F E+ K C PP+++ +N I
Sbjct: 409 LEYMEFCSGKGVAVNAMFYSSLIDGLGKSGRVDEAERIFYEMVKKGC-PPDSYCYNALID 467
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
K ++DEA + M+ GC V +Y+ +I R++ + L D M +G P
Sbjct: 468 ALAKCGKIDEALALSKRMEVDGCDQTVYTYTILITGLFREHRNEEALTLWDLMIDKGITP 527
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
+ + + L SG A +I ++M +G P++ F+ +I L +A R++EA
Sbjct: 528 TAAAFRALSTGLCLSGKVARACKILDEMAPMGVIPETA-FDDMINILCKAGRIKEA 582
>gi|255660910|gb|ACU25624.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
Length = 484
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 195/395 (49%), Gaps = 16/395 (4%)
Query: 96 IQPS--HYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQM 153
+ PS H LV ++H K + AL FRW +EH+ E + +++ILG+ +++
Sbjct: 6 LXPSFDHELVYNVLHSAKTS-EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHA 64
Query: 154 RALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDT 212
R +L +M KG + ++ + G +++V+ F ++ G+E+ ++ + L
Sbjct: 65 RCILLDMPKKGLEWDEDMWVMMIDSYGKQGIVQESVKLFQKMEELGVERTIKSYDALFKV 124
Query: 213 LCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPC 271
+ + G+ +A+ F + L I P TF + I G+ +V+ A ++MK P
Sbjct: 125 ILRRGRYMMAKRYFNKMLSEGIEPTRXTFXVLIWGFFLSGKVETANRFFEDMKSREISPD 184
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
V++Y+T+I Y R + + EM+ + P VVTYTT++ ++A+R+ E
Sbjct: 185 VVTYNTMINGYYRVKKXEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVE 244
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP-DTSTFNTMITMFSH 390
+MK G KP++ ++ L+ L A ++ EA + + EM + +AP D S F +IT
Sbjct: 245 EMKGFGIKPNAIXYSTLLPGLCNAEKMSEARSILK-EMMDKYLAPTDNSIFMRLITSQCK 303
Query: 391 HGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK------ 444
G+ + A VL+ M +L + L+++ K G+ D+ + +LLD ++ K
Sbjct: 304 SGNLDAASDVLKAMIRLS-VPTEAGHYGVLIENFCKAGQYDQAV-KLLDKLIEKDIILRP 361
Query: 445 -HHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
L L+ + Y +I LC + A L ++++
Sbjct: 362 QSTLHLEPSAYNPMIEYLCNNGQAAKAETLVRQLL 396
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 132/311 (42%), Gaps = 4/311 (1%)
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQ 257
E N ET +++ L + K+ AR + L++ K + + + + I + K V E+
Sbjct: 41 FEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKQGIVQESV 100
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
Q+M+ G + SY + + R+ + ++M ++G P T+ ++
Sbjct: 101 KLFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRXTFXVLIWGF 160
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
SG E A R E MK PD +N +I R + +EA Y VEM + P
Sbjct: 161 FLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKXEEAEK-YFVEMKGRNIEPT 219
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
T+ T+I + + A ++EEM KPN + LL K E S +
Sbjct: 220 VVTYTTLIKGYVSVDQVDDALRLVEEMKGF-GIKPNAIXYSTLLPGLCNAEKMSEARS-I 277
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVK 497
L +M++K+ D + + +I C++ + A + K MI + ++++
Sbjct: 278 LKEMMDKYLAPTDNSIFMRLITSQCKSGNLDAASDVLKAMIRLSVPTEAGHYGVLIENFC 337
Query: 498 QKHMYDAAEKI 508
+ YD A K+
Sbjct: 338 KAGQYDQAVKL 348
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 125/267 (46%), Gaps = 6/267 (2%)
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
+ ++++ A+ + +M G + +I SY +Q + +L +M+ G +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKQGIVQESVKLFQKMEELGVERTIK 116
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
+Y + + + G + A R KM G +P F LI+ + +V+ A ++ +
Sbjct: 117 SYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRXTFXVLIWGFFLSGKVETANRFFE-D 175
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M ++PD T+NTMI + E+A EM K + +P V T+ L+K
Sbjct: 176 MKSREISPDVVTYNTMINGYYRVKKXEEAEKYFVEM-KGRNIEPTVVTYTTLIKGYVSVD 234
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ D+ L +L+++M + + Y+ ++ GLC A K A + KEM+ + P +
Sbjct: 235 QVDDAL-RLVEEM-KGFGIKPNAIXYSTLLPGLCNAEKMSEARSILKEMMDKYLAPTDNS 292
Query: 489 C--RLILDEVKQKHMYDAAEKIEAVMK 513
RLI + K ++ A++ ++A+++
Sbjct: 293 IFMRLITSQCKSGNLDAASDVLKAMIR 319
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 5/205 (2%)
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N T+ ++ L ++ A I M G + D + +I + G+ VQE+V ++
Sbjct: 44 NRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKQGIVQESVKLF 103
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
Q +M E GV +++ + + G + A +M E +P TF L+ F
Sbjct: 104 Q-KMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLS-EGIEPTRXTFXVLIWGFF 161
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
+GK E ++ +DM ++ +S D+ TY +I+G R K E A F EM G +I P
Sbjct: 162 LSGKV-ETANRFFEDMKSRE-ISPDVVTYNTMINGYYRVKKXEEAEKYFVEMKGRNIEPT 219
Query: 486 YQT-CRLILDEVKQKHMYDAAEKIE 509
T LI V + DA +E
Sbjct: 220 VVTYTTLIKGYVSVDQVDDALRLVE 244
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 79/213 (37%), Gaps = 28/213 (13%)
Query: 131 EHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFS----------- 179
E S + EMM L MR + + G++ + + K M R S
Sbjct: 273 EARSILKEMMDKYLAPTDNSIFMRLITSQCKSGNLDAASDVLKAMIRLSVPTEAGHYGVL 332
Query: 180 -----GAGQWEDAVRTFDEL----------GTFGLEKNTETMNLLLDTLCKEGKVELARS 224
AGQ++ AV+ D+L T LE + N +++ LC G+ A +
Sbjct: 333 IENFCKAGQYDQAVKLLDKLIEKDIILRPQSTLHLEPSA--YNPMIEYLCNNGQAAKAET 390
Query: 225 VFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCR 284
+ +L + N I G + D A ++ M +Y +++QSY +
Sbjct: 391 LVRQLLKWGVQDPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYDSLVQSYLK 450
Query: 285 QYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
+ + LD M P+ + +VM L
Sbjct: 451 KNEPADAKAALDSMIENDHLPDSALFRSVMESL 483
>gi|225456631|ref|XP_002266698.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74750
[Vitis vinifera]
Length = 875
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 176/364 (48%), Gaps = 18/364 (4%)
Query: 66 DIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAG 125
++ I+ ++ G + +E ++L N + + Y N+++ + +D ALG F W
Sbjct: 319 NVSRILRQLSWGPAAEEALRNL------NCLMDA-YQANQVLKQIQDH-PVALGFFYWLK 370
Query: 126 SCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKG----HIVTLNTIAKVMRRFSGA 181
G++H Y MV ILG+ RQ + LL EM + ++VT N +++ + A
Sbjct: 371 RQTGFKHDGHTYTTMVGILGRARQFGAINKLLAEMVRDGCQPNVVTYN---RLIHSYGRA 427
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTF 240
+AV FD + G + + T L+D K G +++A ++ +++ + P+ T+
Sbjct: 428 NYLNEAVSVFDRMQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAHLSPDTFTY 487
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
++ I+ K + A EM GC P +++Y+ +I + N+ EL +MQ
Sbjct: 488 SVIINCLGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPTALELYRDMQN 547
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
G P+ VTY+ VM L G EEA I +MK PD + L+ G+ V++
Sbjct: 548 AGFQPDKVTYSIVMEVLGHCGHLEEAEAIFTEMKRKNWVPDEPVYGLLVDLWGKVGNVEK 607
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
+ YQ M G+ P+ T N++++ F A+++L+ M +L +P++QT+ L
Sbjct: 608 SWEWYQA-MLNAGLCPNVPTCNSLLSAFLRVHRLSDAYNLLQSMLRL-GLQPSLQTYTLL 665
Query: 421 LKSC 424
L C
Sbjct: 666 LSCC 669
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 166/354 (46%), Gaps = 14/354 (3%)
Query: 161 SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVE 220
S GH+V +++++R+ S E+A+R + L + N +L + ++ V
Sbjct: 312 SSGHVV--ENVSRILRQLSWGPAAEEALRNLNCL------MDAYQANQVLKQI-QDHPVA 362
Query: 221 LARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQ 280
L +L+ ++ + HT+ + + + + EM GC P V++Y+ +I
Sbjct: 363 LGFFYWLKRQTGFKHDGHTYTTMVGILGRARQFGAINKLLAEMVRDGCQPNVVTYNRLIH 422
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
SY R ++ + D MQ GC P+ VTY T++ AK+G + A+ + +KM+ P
Sbjct: 423 SYGRANYLNEAVSVFDRMQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAHLSP 482
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
D+ ++ +I LG+A + A ++ EM + G P+ T+N MI + + ++ A +
Sbjct: 483 DTFTYSVIINCLGKAGHLTSAHKLF-CEMVDQGCVPNLVTYNIMIALQAKARNYPTALEL 541
Query: 401 LEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHG 460
+M +P+ T+ +++ G +E + +M K+ + D Y L++
Sbjct: 542 YRDMQNAGF-QPDKVTYSIVMEVLGHCGHLEEA-EAIFTEMKRKNWVP-DEPVYGLLVDL 598
Query: 461 LCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKH-MYDAAEKIEAVMK 513
+ E ++ ++ M+ + P TC +L + H + DA ++++++
Sbjct: 599 WGKVGNVEKSWEWYQAMLNAGLCPNVPTCNSLLSAFLRVHRLSDAYNLLQSMLR 652
>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 616
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 159/318 (50%), Gaps = 10/318 (3%)
Query: 162 KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVEL 221
K ++V NT V++ A +WE+A E+ + T N+L+D C+ G V+
Sbjct: 290 KPNVVCYNT---VLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDR 346
Query: 222 ARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
+ ++ CIP + T+ I+G+CK VDEA ++ M GC P ISY+ ++
Sbjct: 347 VIELLEQMLEHGCIP-DVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVL 405
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
+ CR + EL+ M QGC PN VT+ T+++++ K G E+AI + ++M + G
Sbjct: 406 KGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCS 465
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
PD ++ +I LG+A + +EA+ + V M G+ P+T +++M + S G +K
Sbjct: 466 PDLISYSTVIDGLGKAGKTEEALELLNV-MINKGITPNTIIYSSMASALSREGRTDKIIQ 524
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIH 459
+ + + + + ++ ++ S K +TD + MV+ + + +TYT++I
Sbjct: 525 MFDSIQD-ATVRSDAALYNAVISSLCKRWETDRAI-DFFAYMVSNGCMP-NESTYTILIR 581
Query: 460 GLCRANKCEWAYLLFKEM 477
GL A L E+
Sbjct: 582 GLASEGLVREAQDLLSEL 599
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 157/345 (45%), Gaps = 19/345 (5%)
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKS 231
++R G DA+ DE+ G +++L+ C+ G A L K
Sbjct: 114 IVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKG 173
Query: 232 CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFS-- 289
C ++ N+ + C+ VDE ++++ GC P ++SY+ +++ C +
Sbjct: 174 CTL-DSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDV 232
Query: 290 --------KVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPD 341
+V+E L +M GC P++ Y T++ + K G E A I +M G KP+
Sbjct: 233 EELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPN 292
Query: 342 SRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVL 401
+N ++ L A R +EA + EM + D TFN ++ F +G ++ +L
Sbjct: 293 VVCYNTVLKGLCSAERWEEAEDLL-AEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELL 351
Query: 402 EEMNKLEH-CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHG 460
E+M LEH C P+V T+ ++ K G DE + LL +M + + +YT+V+ G
Sbjct: 352 EQM--LEHGCIPDVITYTTVINGFCKEGLVDEAV-MLLKNM-SACGCKPNTISYTIVLKG 407
Query: 461 LCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
LCRA + A L MI P T +++ + +K + + A
Sbjct: 408 LCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQA 452
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 161/387 (41%), Gaps = 49/387 (12%)
Query: 171 IAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK 230
++ ++R AG+ DA R D T G N ++ C+ G+V AR + +
Sbjct: 47 LSALIRSLCAAGRTADAARALD---TAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVP 103
Query: 231 SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSK 290
+PPNA+T+ + C + +A + EM GC I+++ CR F
Sbjct: 104 --VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRS 161
Query: 291 VYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIY 350
L + A+GC + V+S + + G +E + + K+ G +PD +N ++
Sbjct: 162 AVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLK 221
Query: 351 TLGRASR-------VQEAVYVYQV--EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVL 401
L A R + E V V++ +MPE+G PD + T+I GHHE A +L
Sbjct: 222 GLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDIL 281
Query: 402 EEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE---------------------------CL 434
M KPNV ++ +LK + +E C
Sbjct: 282 SRMPSY-GLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQ 340
Query: 435 SQLLDDMVN------KHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ L+D ++ +H D+ TYT VI+G C+ + A +L K M P +
Sbjct: 341 NGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTIS 400
Query: 489 CRLILDEV-KQKHMYDAAEKIEAVMKK 514
++L + + + DA E I ++++
Sbjct: 401 YTIVLKGLCRAERWVDAQELISHMIQQ 427
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 167/381 (43%), Gaps = 56/381 (14%)
Query: 153 MRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDT 212
+RAL +KG + V+ G ++ V +L +FG E + + N +L
Sbjct: 163 VRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKG 222
Query: 213 LC--------KEGKVELARSVFLELKSCIP-----PNAHTFNIFIHGWCKINRVDEAQWT 259
LC +E VE+ R E S +P P+ + I G CK + A
Sbjct: 223 LCMAKRWDDVEELMVEMVR--VHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDI 280
Query: 260 IQEMKGHGCHPCVISYSTIIQS-----------------------------------YCR 284
+ M +G P V+ Y+T+++ +C+
Sbjct: 281 LSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQ 340
Query: 285 QYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRF 344
+V ELL++M GC P+V+TYTTV++ K G +EA+ + + M G KP++
Sbjct: 341 NGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTIS 400
Query: 345 FNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
+ ++ L RA R +A + M + G P+ TFNT+I G E+A +L++M
Sbjct: 401 YTIVLKGLCRAERWVDAQELIS-HMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQM 459
Query: 405 NKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRA 464
+ C P++ ++ ++ K GKT+E L +LL+ M+NK ++ + Y+ + L R
Sbjct: 460 -LVNGCSPDLISYSTVIDGLGKAGKTEEAL-ELLNVMINK-GITPNTIIYSSMASALSRE 516
Query: 465 NKCEWAYLLFKEMIGHDITPR 485
+ + +F + D T R
Sbjct: 517 GRTDKIIQMFDSI--QDATVR 535
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 156/375 (41%), Gaps = 49/375 (13%)
Query: 156 LLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLC 214
+L+EM +G T ++ G + AVR L G ++ NL++ +C
Sbjct: 130 VLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAIC 189
Query: 215 KEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQ----------WTIQEM 263
++G V+ + +L S P+ ++N + G C R D+ + + +M
Sbjct: 190 EQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQM 249
Query: 264 KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF 323
HGC P + Y+TII C+ + ++L M + G PNVV Y TV+ L + +
Sbjct: 250 PEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERW 309
Query: 324 EEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNT 383
EEA + +M D FN L+ + V + + + +M E+G PD T+ T
Sbjct: 310 EEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLE-QMLEHGCIPDVITYTT 368
Query: 384 MITMFSHHGHHEKAFHVLEEMNKL----------------------------------EH 409
+I F G ++A +L+ M+ +
Sbjct: 369 VINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQG 428
Query: 410 CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEW 469
C PN TF+ L+ K G ++ + L +VN S D+ +Y+ VI GL +A K E
Sbjct: 429 CLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNG--CSPDLISYSTVIDGLGKAGKTEE 486
Query: 470 AYLLFKEMIGHDITP 484
A L MI ITP
Sbjct: 487 ALELLNVMINKGITP 501
>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 113/426 (26%), Positives = 194/426 (45%), Gaps = 19/426 (4%)
Query: 92 VCNAIQPSHYLVNKLIHRF--KDDWKSALGIFR--WAGSCPGYEHSSEIYEMMVDILGKV 147
V QP+ LIH + ++A+ + R +C E + Y ++D L K
Sbjct: 171 VGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNC---EPNVITYNTIIDCLFKD 227
Query: 148 RQMDQMRALLEEM-SKG---HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNT 203
RQ+++ + EM +KG ++ T N+I + +FS +W+ +E+ + N
Sbjct: 228 RQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFS---EWKHVATLMNEMVDSKIMPNV 284
Query: 204 ETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQE 262
L+D LCKEG V +A V + ++ + P+ T+ + G C + +DEA
Sbjct: 285 VIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDT 344
Query: 263 MKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGD 322
M GC P VISYST+I YC+ K L +EM + PN+VTY T++ L G
Sbjct: 345 MVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGR 404
Query: 323 FEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFN 382
+AI + +M G PD + L+ L + + +A+ + + N +APD ++N
Sbjct: 405 LRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSN-LAPDIQSYN 463
Query: 383 TMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMV 442
+I G E A + ++ + P+V T+ ++ G E ++L +M
Sbjct: 464 IVIDGMCRVGELEAAGDLFSSLSS-KGLHPDVWTYTIMINGLCLQGLLAEA-TKLFREM- 520
Query: 443 NKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMY 502
N S D TY L+ G R N+ A L +EM+G + T LI++ + +
Sbjct: 521 NTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDGLD 580
Query: 503 DAAEKI 508
+ ++I
Sbjct: 581 QSVKQI 586
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 163/376 (43%), Gaps = 39/376 (10%)
Query: 172 AKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-K 230
AK++ + + + ++ + G+ + T+ +++++ C +V+ SV ++ K
Sbjct: 78 AKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIFK 137
Query: 231 SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSK 290
P+ TF I G C ++ EA +M G G P ++Y T+I C+ N
Sbjct: 138 LGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRA 197
Query: 291 VYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIY 350
LL M + C PNV+TY T++ L K EA+ I +M G P+ +N +I+
Sbjct: 198 AIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIH 257
Query: 351 TLGR---------------ASRVQEAVYVYQV-------------------EMPENGVAP 376
L + S++ V ++ M + GV P
Sbjct: 258 GLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEP 317
Query: 377 DTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQ 436
D T+ ++ ++A V + M + + C PNV ++ L+ K + D+ +
Sbjct: 318 DVVTYTALMDGHCLRSEMDEADKVFDTMVR-KGCAPNVISYSTLINGYCKIQRIDKAM-Y 375
Query: 437 LLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV 496
L ++M + L +I TY +IHGLC + A LF EM+ P T R++LD +
Sbjct: 376 LFEEMCQR-ELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYL 434
Query: 497 -KQKHMYDAAEKIEAV 511
K +H+ A ++A+
Sbjct: 435 CKTRHLDQAMAMLKAI 450
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/414 (23%), Positives = 186/414 (44%), Gaps = 43/414 (10%)
Query: 134 SEIYEMMVDI--LGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRT 190
S++Y + + I + ++D ++L ++ K GH T ++R G+ +A+
Sbjct: 107 SDVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHL 166
Query: 191 FDELGTFGLEKNTETMNLLLDTLCKEG--------------------------------- 217
FD++ G + N T L+ LCK G
Sbjct: 167 FDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFK 226
Query: 218 --KVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVIS 274
+V A ++F E+ I PN T+N IHG CK + + EM P V+
Sbjct: 227 DRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVI 286
Query: 275 YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
++T++ + C++ + ++++D M +G P+VVTYT +M + +EA ++ + M
Sbjct: 287 FTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMV 346
Query: 335 IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHH 394
G P+ ++ LI + R+ +A+Y+++ EM + + P+ T+NT+I H G
Sbjct: 347 RKGCAPNVISYSTLINGYCKIQRIDKAMYLFE-EMCQRELVPNIVTYNTLIHGLCHVGRL 405
Query: 395 EKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTY 454
A + EM P++ T+ LL KT D+ ++ L + +L+ DI +Y
Sbjct: 406 RDAIALFHEMVASGQI-PDLVTYRILLDYLCKTRHLDQAMAML--KAIEGSNLAPDIQSY 462
Query: 455 TLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+VI G+CR + E A LF + + P T ++++ + + + A K+
Sbjct: 463 NIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKL 516
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 128/262 (48%), Gaps = 4/262 (1%)
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
N +DEA + M P V+ ++ I+ S ++S V L +M + G P +V T
Sbjct: 53 NTIDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTL 112
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
V++ + + K+ +G +PD+ F LI L ++ EA++++ +M
Sbjct: 113 AIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFD-KMV 171
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKT 430
G P+ T+ T+I G+ A +L M + ++C+PNV T++ ++ FK +
Sbjct: 172 GEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQ-KNCEPNVITYNTIIDCLFKDRQV 230
Query: 431 DECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCR 490
+E L+ + +M+ K +S +++TY +IHGLC+ ++ + L EM+ I P
Sbjct: 231 NEALN-IFSEMIAK-GISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFT 288
Query: 491 LILDEVKQKHMYDAAEKIEAVM 512
++D + ++ M A + VM
Sbjct: 289 TLVDALCKEGMVTIAHDVVDVM 310
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 170/352 (48%), Gaps = 12/352 (3%)
Query: 131 EHSSEIYEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQWED 186
E + IY ++D L K + MD L +M K + T N++ + + G+W D
Sbjct: 253 EANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNY---GRWSD 309
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIH 245
A R ++ + N T N L+D KEGK+ A +F E+ + I PN T+N I+
Sbjct: 310 ASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLIN 369
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G+C +R+DEAQ M C P V++Y+T+I+ +C+ + EL EM +G
Sbjct: 370 GFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG 429
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N VTY T++ L ++GD + A +I +KM G PD ++ L+ L + ++++A+ V+
Sbjct: 430 NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVF 489
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
+ + ++ + P+ T+N MI G E + + ++ L+ KPNV + ++
Sbjct: 490 EY-LQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLS-LKGVKPNVIIYTTMISGFC 547
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
+ G +E L +M L D Y +I R + L KEM
Sbjct: 548 RKGLKEEA-DALFREMKEDGTLP-DSGCYNTLIRARLRDGDKAASAELIKEM 597
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 182/369 (49%), Gaps = 8/369 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
G H+ Y ++++ + Q+ A+L +M K G+ + T++ ++ + + +A
Sbjct: 111 GIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEA 170
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIH 245
V D++ G + +T T N L+ L K A ++ + + C P+ T+ ++
Sbjct: 171 VALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGC-QPDLFTYGTVVN 229
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G CK +D A +++M+ V+ Y+TII C+ + ++L ++M+ +G P
Sbjct: 230 GLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKP 289
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
+V TY +++S L G + +A R+ M P+ FN LI + ++ EA ++
Sbjct: 290 DVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLF 349
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
EM + + P+ T+N++I F H ++A + M + C P+V T++ L+K
Sbjct: 350 D-EMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVS-KDCLPDVVTYNTLIKGFC 407
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
K + +E + +L +M ++ L + TY +I GL +A C+ A +FK+M+ + P
Sbjct: 408 KAKRVEEGM-ELFREM-SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPD 465
Query: 486 YQTCRLILD 494
T ++LD
Sbjct: 466 IITYSILLD 474
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 172/374 (45%), Gaps = 6/374 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
+ ++ + K+ + D + +L E+M I T + ++ F Q A+ ++
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMM 143
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
G E + T++ LL+ C ++ A ++ ++ + P+ TFN IHG N+
Sbjct: 144 KLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKAS 203
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA I M GC P + +Y T++ C++ + LL +M+ NVV Y T++
Sbjct: 204 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTII 263
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
L K ++A + KM+ G KPD +N LI L R +A + +M E +
Sbjct: 264 DGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLS-DMIERKI 322
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
P+ TFN++I F+ G +A + +EM + PN+ T++ L+ + DE
Sbjct: 323 NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ-RSIDPNIVTYNSLINGFCMHDRLDEA- 380
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
Q+ MV+K L D+ TY +I G C+A + E LF+EM + T ++
Sbjct: 381 QQIFTLMVSKDCLP-DVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 439
Query: 495 EVKQKHMYDAAEKI 508
+ Q D A+KI
Sbjct: 440 GLFQAGDCDMAQKI 453
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 171/367 (46%), Gaps = 18/367 (4%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAV 188
GY H I E V +DQM +E K VT NT+ + + A + AV
Sbjct: 160 GYCHGKRISE-------AVALVDQM---VEMGYKPDTVTFNTLIHGLFLHNKASE---AV 206
Query: 189 RTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGW 247
D + G + + T +++ LCK G ++LA S+ ++ K I N +N I G
Sbjct: 207 ALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGL 266
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
CK +D+A +M+ G P V +Y+++I C +S LL +M + PNV
Sbjct: 267 CKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNV 326
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
VT+ +++ AK G EA ++ ++M P+ +N LI R+ EA ++ +
Sbjct: 327 VTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTL 386
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKT 427
M PD T+NT+I F E+ + EM++ N T++ L++ F+
Sbjct: 387 -MVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQ-RGLVGNTVTYNTLIQGLFQA 444
Query: 428 GKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
G D ++Q + + + DI TY++++ GLC+ K E A ++F+ + + P
Sbjct: 445 GDCD--MAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIY 502
Query: 488 TCRLILD 494
T ++++
Sbjct: 503 TYNIMIE 509
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 120/235 (51%), Gaps = 6/235 (2%)
Query: 165 IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARS 224
+VT NT+ K F A + E+ + F E+ GL NT T N L+ L + G ++A+
Sbjct: 396 VVTYNTLIK---GFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQK 452
Query: 225 VFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYC 283
+F ++ S +PP+ T++I + G CK ++++A + ++ P + +Y+ +I+ C
Sbjct: 453 IFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMC 512
Query: 284 RQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSR 343
+ ++L + +G PNV+ YTT++S + G EEA + +MK G+ PDS
Sbjct: 513 KAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSG 572
Query: 344 FFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
+N LI R + + + EM G D ST + +I M H G EK++
Sbjct: 573 CYNTLIRARLRDGDKAASAELIK-EMRSCGFVGDASTISMVINML-HDGRLEKSY 625
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 134/297 (45%), Gaps = 11/297 (3%)
Query: 216 EGKVELARSVFLELKSCIP-PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVIS 274
E K++ A ++F E+ P P+ F+ + K+N+ D ++M+ G +
Sbjct: 59 ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYT 118
Query: 275 YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
YS ++ +CR+ +L +M G P++VT +++++ EA+ + ++M
Sbjct: 119 YSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMV 178
Query: 335 IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHH 394
+G KPD+ FN LI+ L ++ EAV + M G PD T+ T++ G
Sbjct: 179 EMGYKPDTVTFNTLIHGLFLHNKASEAVALID-RMVARGCQPDLFTYGTVVNGLCKRGDI 237
Query: 395 EKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHH---LSLDI 451
+ A +L++M K + NV ++ ++ K D+ D+ NK + D+
Sbjct: 238 DLALSLLKKMEK-GKIEANVVIYNTIIDGLCKYKHMDDAF-----DLFNKMETKGIKPDV 291
Query: 452 TTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
TY +I LC + A L +MI I P T ++D ++ AEK+
Sbjct: 292 FTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKL 348
>gi|255660914|gb|ACU25626.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 481
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/389 (25%), Positives = 191/389 (49%), Gaps = 14/389 (3%)
Query: 100 HYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEE 159
H LV ++H K + AL FRW +EH E + +++ILG+ +++ R +L +
Sbjct: 12 HELVYNVLHAAKTS-EHALQFFRWVERSNLFEHDRETHLKIIEILGRASKLNHARCILLD 70
Query: 160 MSKGHIVTLNTIAKVM-RRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
M K + + +M + AG +++V+ F ++ G+E+ ++ + L + + G+
Sbjct: 71 MPKKGLEWDEDMWVLMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVIMRRGR 130
Query: 219 VELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
+A+ F + L I P HTFN+ I G+ ++D A ++MK P V++Y+T
Sbjct: 131 FMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKMDTAMRFFEDMKSREISPDVVTYNT 190
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+I R + + EM+ + P VVTYTT++ +A+R+ E+MK G
Sbjct: 191 MINGCYRVKKMDEAEKYFVEMKGKNIEPTVVTYTTLIKGYVSVDQVHDALRLVEEMKGYG 250
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP-DTSTFNTMITMFSHHGHHEK 396
KP++ ++ L+ L A ++ EA + + EM + +AP D S F +I+ G+ +
Sbjct: 251 IKPNAITYSTLLPGLCNAGKMSEAQSILK-EMVDKYIAPKDNSIFMRLISSQCEAGNLDA 309
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK-------HHLSL 449
A VL+ M +L + L+++ K G+ D + +LLD ++ K L +
Sbjct: 310 AADVLKAMIRLS-VPTEAGHYGVLIENFCKAGQHDRAV-KLLDKLIEKDIILRPQSTLHM 367
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMI 478
+ + Y +I LC + A L ++++
Sbjct: 368 EPSAYNPMIEYLCSNGQTAKAEALVRQLL 396
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 158/368 (42%), Gaps = 56/368 (15%)
Query: 129 GYEHSSEIYEMMVD-ILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G E + + Y+ + I+ + R M R + +S+G T +T ++ F +G+ + A
Sbjct: 110 GVERTIKSYDALFKVIMRRGRFMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKMDTA 169
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHG 246
+R F+++ + + + T N +++ + K++ A F+E+K I P T+ I G
Sbjct: 170 MRFFEDMKSREISPDVVTYNTMINGCYRVKKMDEAEKYFVEMKGKNIEPTVVTYTTLIKG 229
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTI---------------------------- 278
+ +++V +A ++EMKG+G P I+YST+
Sbjct: 230 YVSVDQVHDALRLVEEMKGYGIKPNAITYSTLLPGLCNAGKMSEAQSILKEMVDKYIAPK 289
Query: 279 --------IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRIT 330
I S C N ++L M P Y ++ K+G + A+++
Sbjct: 290 DNSIFMRLISSQCEAGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKAGQHDRAVKLL 349
Query: 331 EKM--KIVGSKPDSRF------FNCLIYTL---GRASRVQEAVYVYQVEMPENGVAPDTS 379
+K+ K + +P S +N +I L G+ ++ + V ++ + GV DT+
Sbjct: 350 DKLIEKDIILRPQSTLHMEPSAYNPMIEYLCSNGQTAKAEALVR----QLLKLGVQ-DTT 404
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLD 439
NT+I ++ G + AF +L+ M + + L++S K + + + LD
Sbjct: 405 ALNTLIRGYAQEGSPDSAFELLKIMLR-RKVDSEKSAYDALVQSYLKKNEPADAKAA-LD 462
Query: 440 DMVNKHHL 447
M+ HL
Sbjct: 463 SMIENDHL 470
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 93/202 (46%), Gaps = 5/202 (2%)
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
T+ ++ L ++ A I M G + D + +I + G+A VQE+V ++Q +
Sbjct: 47 THLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVLMIDSYGKAGIVQESVKLFQ-K 105
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M E GV +++ + + G A +M E +P TF+ ++ F +G
Sbjct: 106 MEELGVERTIKSYDALFKVIMRRGRFMMAKRYFNKMLS-EGIEPTRHTFNVMIWGFFLSG 164
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
K D + + +DM ++ +S D+ TY +I+G R K + A F EM G +I P T
Sbjct: 165 KMDTAM-RFFEDMKSRE-ISPDVVTYNTMINGCYRVKKMDEAEKYFVEMKGKNIEPTVVT 222
Query: 489 -CRLILDEVKQKHMYDAAEKIE 509
LI V ++DA +E
Sbjct: 223 YTTLIKGYVSVDQVHDALRLVE 244
>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
Length = 694
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 165/347 (47%), Gaps = 12/347 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK----GHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++D GK +++++ L+ EM K +VT N + +F G E A F
Sbjct: 237 YNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKF---GWIEKAYSYFG 293
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKIN 251
E+ G+ N T++ +D CKEG V A +F +++ + PN T+ + G CK
Sbjct: 294 EMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAG 353
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
R+D+A + EM G P V++Y+ ++ C++ + ++L M+ G N + YT
Sbjct: 354 RLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYT 413
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
T++ + + E A+ + +MK G + D + LI+ L + ++ EA + +M +
Sbjct: 414 TLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLH-KMDD 472
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
G+ P+T + T++ F G +A +L ++ +PNV T+ L+ K G
Sbjct: 473 CGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPD-SGLQPNVVTYCALIDGLCKAGSIY 531
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
E +S D + + L ++ YT +I G C+ A L EM+
Sbjct: 532 EAISHF--DKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMV 576
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 157/365 (43%), Gaps = 47/365 (12%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFN 241
G +DAVR + + NT T N +L L + + L R +F L + PN TFN
Sbjct: 147 GLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFEHLPA---PNVFTFN 203
Query: 242 IFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ 301
I I CK + EA+ MK GC P V++Y+++I Y + +V L+ EM+
Sbjct: 204 IVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKS 263
Query: 302 GCPPNVVTYTTVMSYLAKSGDFE-----------------------------------EA 326
GC +VVTY +++ +K G E EA
Sbjct: 264 GCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREA 323
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
+++ +M++ G P+ + L+ +A R+ +A+ + EM G+ P+ T+ M+
Sbjct: 324 MKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLD-EMVHQGLVPNVVTYTVMVD 382
Query: 387 MFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHH 446
G A VL M + K N + L+ F ++ L LL++M NK
Sbjct: 383 GLCKEGKVAVADDVLSLMER-AGVKANELLYTTLIHGHFMNKNSERAL-DLLNEMKNK-G 439
Query: 447 LSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAE 506
+ LD++ Y +I GLC+ K + A L +M + P I+D + A +
Sbjct: 440 MELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDA-----FFKAGK 494
Query: 507 KIEAV 511
+ EAV
Sbjct: 495 ESEAV 499
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 143/340 (42%), Gaps = 75/340 (22%)
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHT 239
AG+ +DA+ DE+ GL N T +++D LCKEGKV +A V L ++ + N
Sbjct: 352 AGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELL 411
Query: 240 FNIFIHG---------------------------------W--CKINRVDEAQWTIQEMK 264
+ IHG W CK+ ++DEA+ + +M
Sbjct: 412 YTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMD 471
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
G P + Y+TI+ ++ + S+ LL ++ G PNVVTY ++ L K+G
Sbjct: 472 DCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIY 531
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTM 384
EAI +KM+ +G P+ + + LI + + +AV++ EM + G++ D + ++
Sbjct: 532 EAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMN-EMVDKGMSLDKVVYTSL 590
Query: 385 ITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK 444
I G + AF + +M +TG
Sbjct: 591 IDGHMKQGDLQGAFALKAKM--------------------IETG---------------- 614
Query: 445 HHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
L LD+ YT I G C N + A + EMIG ITP
Sbjct: 615 --LQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITP 652
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 117/251 (46%), Gaps = 3/251 (1%)
Query: 156 LLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLC 214
LL EM +KG + ++ ++ + ++A ++ GL NT ++D
Sbjct: 431 LLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFF 490
Query: 215 KEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI 273
K GK A ++ ++ S + PN T+ I G CK + EA +M+ G P V
Sbjct: 491 KAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQ 550
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
Y+T+I +C+ + SK L++EM +G + V YT+++ K GD + A + KM
Sbjct: 551 VYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKM 610
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
G + D + C I + +QEA V EM G+ PD + +N +I + G+
Sbjct: 611 IETGLQLDLYCYTCFISGFCNMNMMQEARGVLS-EMIGTGITPDKTAYNCLIRKYQKLGN 669
Query: 394 HEKAFHVLEEM 404
E+A + EM
Sbjct: 670 MEEASSLQNEM 680
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 131/285 (45%), Gaps = 11/285 (3%)
Query: 230 KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFS 289
+S +P F+ + +D+A + ++ P + + I+ R
Sbjct: 129 RSALPS---VFDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGG 185
Query: 290 KVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
V L + + A PNV T+ V+ +L K G+ EA + +MK +G PD +N LI
Sbjct: 186 LVRRLFEHLPA----PNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLI 241
Query: 350 YTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH 409
G+ ++E V + EM ++G A D T+N +I FS G EKA+ EM +L
Sbjct: 242 DGYGKCGELEE-VELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRL-G 299
Query: 410 CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEW 469
NV T + + K G E + +L M + + + T YT ++ G C+A + +
Sbjct: 300 VMANVVTLSTFVDAFCKEGLVREAM-KLFAQMRVRGMMPNEFT-YTSLVDGTCKAGRLDD 357
Query: 470 AYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
A +L EM+ + P T +++D + ++ A+ + ++M++
Sbjct: 358 AIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMER 402
>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 175/354 (49%), Gaps = 6/354 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
+ +++ L + + M++ + +LEEM G + T + G + ++ +E
Sbjct: 290 FNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAV 349
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVD 254
G++ T ++LL+ LCKEG +E A V + L++ + P FN ++G+C++ ++
Sbjct: 350 RKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDIN 409
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
+A TI++M+ G P ++Y+++++ +C N + + + +M +G PNV TY T++
Sbjct: 410 KAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLI 469
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
+S F+ +I E+M+ G KP+ + CLI L + + + EA + +M GV
Sbjct: 470 DGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILG-DMVHRGV 528
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
P+ +N +I G + AF +EM E P + T++ L+ K GK E
Sbjct: 529 VPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIV-PTLVTYNILINGLCKKGKVME-- 585
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
++ L + + LS D+ TY +I G A + A L++ M I P T
Sbjct: 586 AENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNT 639
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 127/517 (24%), Positives = 228/517 (44%), Gaps = 33/517 (6%)
Query: 4 HLQKYLKQARIPLNPLTSRIRFHSSSENCSHIVSSSPIESYCSDGARLDHHQVLCVDSPR 63
HL + P+ PL S + SE S +VS S E Y + VL P
Sbjct: 98 HLYTLFSLSSTPMKPLFSDMLLSICSE--SKMVSESA-ELY----MLMKKDGVL----PS 146
Query: 64 LPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFK--DDWKSALGIF 121
+ +++ + + ++ Q L + V + ++P ++ K I D K A+ +
Sbjct: 147 VASLNLFLESLVSTKRYEDTLQ-LFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELM 205
Query: 122 ---RWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI----VTLNTIAKV 174
+ G PG +Y +++ L K ++M L +EM + +T NT+
Sbjct: 206 TCMKRGGVSPGVF----VYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTL--- 258
Query: 175 MRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CI 233
+ + GQ E+A + + +E T N LL+ LC+ +E A+ V E++
Sbjct: 259 IDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGF 318
Query: 234 PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
P+ T+ G K VD + +E G + S ++ + C++ N K E
Sbjct: 319 VPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEE 378
Query: 294 LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLG 353
+L + G P V + T+++ + GD +A EKM+ VG +P+ +N L+
Sbjct: 379 VLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFC 438
Query: 354 RASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPN 413
++EA + +M E GV P+ T+NT+I + ++ F +LEEM K + KPN
Sbjct: 439 EMKNMEEAEKCIK-KMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEK-KGLKPN 496
Query: 414 VQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLL 473
V ++ L+ K E +L DMV++ + + Y ++I G C A K + A+
Sbjct: 497 VISYGCLINCLCKDANILEA-EVILGDMVHRGVVP-NAQIYNMLIDGSCIAGKLKDAFRF 554
Query: 474 FKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEA 510
F EM+ +I P T ++++ + +K AE + +
Sbjct: 555 FDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLAS 591
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 178/365 (48%), Gaps = 7/365 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +V +++ M++ +++M KG + + T ++ + + ++ + +E+
Sbjct: 430 YNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEME 489
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
GL+ N + L++ LCK+ + A + ++ + PNA +N+ I G C ++
Sbjct: 490 KKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLK 549
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
+A EM P +++Y+ +I C++ + L E+ +G +V+TY +++
Sbjct: 550 DAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLI 609
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
S + +G+ ++A+ + E MK G KP ++ LI G+ V +YQ EM + +
Sbjct: 610 SGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLVL-VEKIYQ-EMLQMNL 667
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
PD +N +I + HG +KA + M + + +P+ T++ L+ FK G+ + +
Sbjct: 668 VPDRVIYNALIHCYVEHGDVQKACSLHSAM-EAQGIQPDKMTYNCLILGHFKEGRMHK-V 725
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
L++DM L TY ++I G C+ + AY+ ++EM + TP C ++
Sbjct: 726 KNLVNDM-KIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLIT 784
Query: 495 EVKQK 499
++++
Sbjct: 785 GLREE 789
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 148/386 (38%), Gaps = 79/386 (20%)
Query: 95 AIQPSHYLVNKLIHRF-----KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQ 149
++P+H N L+ +F ++ + + G P + E Y ++D G+
Sbjct: 422 GLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLP----NVETYNTLIDGYGRSCL 477
Query: 150 MDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNL 208
D+ +LEEM KG + + ++ +A ++ G+ N + N+
Sbjct: 478 FDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNM 537
Query: 209 LLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG 267
L+D C GK++ A F E+ + I P T+NI I+G CK +V EA+ E+ G
Sbjct: 538 LIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKG 597
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSG------ 321
VI+Y+++I Y N K EL + M+ G P + TY +++ K G
Sbjct: 598 LSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLVLVEK 657
Query: 322 ----------------------------DFEEAIRITEKMKIVGSKPDSRFFNCLI---Y 350
D ++A + M+ G +PD +NCLI +
Sbjct: 658 IYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHF 717
Query: 351 TLGRASRVQEAV-------------------------------YVYQVEMPENGVAPDTS 379
GR +V+ V YV+ EM ENG P S
Sbjct: 718 KEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVS 777
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMN 405
+ +IT G A + EMN
Sbjct: 778 ICDNLITGLREEGRSHDADVICSEMN 803
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 100/244 (40%), Gaps = 39/244 (15%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++++ L K ++ + L E++ KG + T ++ +S AG + A+ ++ +
Sbjct: 570 YNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMK 629
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-------------------------- 229
G++ T + L+ KEG V L ++ E+
Sbjct: 630 KSGIKPTLNTYHRLIAGCGKEGLV-LVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQ 688
Query: 230 KSC----------IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
K+C I P+ T+N I G K R+ + + + +MK G P +Y +I
Sbjct: 689 KACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILI 748
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
+C+ +F Y EM G P+V +++ L + G +A I +M + G K
Sbjct: 749 VGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLITGLREEGRSHDADVICSEMNMKG-K 807
Query: 340 PDSR 343
D R
Sbjct: 808 DDCR 811
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/362 (27%), Positives = 170/362 (46%), Gaps = 8/362 (2%)
Query: 126 SCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWE 185
SC G S + Y +++D L K ++++ ++LL EM+ + N ++ G+
Sbjct: 272 SCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNA 331
Query: 186 DAVRTF-DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIF 243
DA E+ + G + + + + KEG +E A+++F + + + P A +
Sbjct: 332 DAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASL 391
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
I G+ + V + + E+K +Y T ++ C + Y ++ EM A GC
Sbjct: 392 IEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGC 451
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
PNVV YTT++ + F +A+R+ ++M+ G PD+ +N LI L +A ++ EA
Sbjct: 452 RPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEA-R 510
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE-HCKPNVQTFHPLLK 422
+ +EM ENG PD T+ I+ + G A ++EM LE PN L+
Sbjct: 511 SFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEM--LECGVIPNKVLCTGLIN 568
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
K GK E S MV + L D TYT++++GL + K A +F EM G I
Sbjct: 569 EYCKKGKVIEACSA-FRSMVEQGILG-DAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGI 626
Query: 483 TP 484
P
Sbjct: 627 AP 628
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 110/412 (26%), Positives = 182/412 (44%), Gaps = 50/412 (12%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ L K ++MD+ R+ L EM G T + + AG++ A + E+
Sbjct: 493 YNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEML 552
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
G+ N L++ CK+GKV A S F + + I +A T+ + ++G K +V+
Sbjct: 553 ECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVN 612
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSY-------------------------------- 282
+A+ EM+G G P V SY T+I +
Sbjct: 613 DAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLL 672
Query: 283 ---CRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
CR K ELLDEM +G PPN VTY T++ KSGD EA ++ ++MK+ G
Sbjct: 673 GGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLV 732
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
PDS + L+ R + V+ A+ ++ E E G A ++ FN +I G E
Sbjct: 733 PDSFVYTTLVDGCCRLNDVERAITIF--ETNEKGCASSSAPFNALINWVFKFGKTE---L 787
Query: 400 VLEEMNKL------EHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
+ +N+L + KPN T++ ++ K G E +L M K +L + T
Sbjct: 788 TTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNL-EAAKELFHHM-QKANLMPTVIT 845
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
YT +++G + + + +F E+I I P +I++ ++ M A
Sbjct: 846 YTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKA 897
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 166/373 (44%), Gaps = 23/373 (6%)
Query: 119 GIFRWAGSCPGYEHSSEI-----------YEMMVDILGKVRQMDQMRALLEEMS----KG 163
G FR GYE EI Y V + +D +++EM +
Sbjct: 394 GFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRP 453
Query: 164 HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELAR 223
++V T+ K F ++ DAVR E+ G+ +T N L+ L K K++ AR
Sbjct: 454 NVVIYTTLIKT---FLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEAR 510
Query: 224 SVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSY 282
S LE+ ++ P+A T+ FI G+ + A ++EM G P + + +I Y
Sbjct: 511 SFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEY 570
Query: 283 CRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDS 342
C++ + M QG + TYT +M+ L K+G +A I +M+ G PD
Sbjct: 571 CKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDV 630
Query: 343 RFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLE 402
+ LI + +Q+A ++ EM + G+ + +N ++ F G EKA +L+
Sbjct: 631 FSYGTLIDGFSKLGNMQKASSIFD-EMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLD 689
Query: 403 EMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC 462
EM+ + PN T+ ++ K+G E QL D+M K L D YT ++ G C
Sbjct: 690 EMSG-KGFPPNAVTYCTIIDGYCKSGDLAEAF-QLFDEMKLK-GLVPDSFVYTTLVDGCC 746
Query: 463 RANKCEWAYLLFK 475
R N E A +F+
Sbjct: 747 RLNDVERAITIFE 759
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 140/305 (45%), Gaps = 26/305 (8%)
Query: 202 NTETMNLLLDTLCKEGKVELARSVFL-----------------ELK---SC--IPPNAHT 239
+ ++ +L+ C++G V+LA+ V L ELK SC + P+ +
Sbjct: 223 DVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKSMSCKGLVPSRQS 282
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+N+ I G CK R+++A+ + EM G ++YS +I + N L+ EM
Sbjct: 283 YNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGLVHEMV 342
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
+ G + + Y + ++K G E+A + + M G P +R + LI R V+
Sbjct: 343 SHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVR 402
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
+ Y VE+ + + T+ T + G + A+++++EM C+PNV +
Sbjct: 403 KG-YELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGA-SGCRPNVVIYTT 460
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
L+K+ + + + + ++L +M + ++ D Y +I GL +A K + A EM+
Sbjct: 461 LIKTFLQKSRFGDAV-RVLKEM-REQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVE 518
Query: 480 HDITP 484
+ P
Sbjct: 519 NGFKP 523
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/393 (21%), Positives = 157/393 (39%), Gaps = 53/393 (13%)
Query: 84 FQSLKQDHVCNAIQPSHYLVNKLIHRFK-DDWKSALGIFRWAGSCPGYEHSSEIYEMMVD 142
F+S+ + + + L+N L+ K +D + R G P Y ++D
Sbjct: 583 FRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFS----YGTLID 638
Query: 143 ILGKVRQMDQMRALLEEMSKGHIVTLNTIA--KVMRRFSGAGQWEDAVRTFDELGTFGLE 200
K+ M + ++ +EM + + T N I ++ F +G+ E A DE+ G
Sbjct: 639 GFSKLGNMQKASSIFDEMVQAGL-TSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFP 697
Query: 201 KNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWT 259
N T ++D CK G + A +F E+K + P++ + + G C++N V+ A T
Sbjct: 698 PNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA-IT 756
Query: 260 IQEMKGHGC---------------------------------------HPCVISYSTIIQ 280
I E GC P ++Y+ +I
Sbjct: 757 IFETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMID 816
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
C++ N EL MQ P V+TYT++++ K G E + +++ G +P
Sbjct: 817 YLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEP 876
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP----DTSTFNTMITMFSHHGHHEK 396
D+ ++ +I + +A+ + +N V ST +++ F+ G E
Sbjct: 877 DNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEV 936
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
A V+E M +L++ + + +SC + +
Sbjct: 937 AEKVVENMVRLKYIPDSSTVIELINESCISSNQ 969
>gi|242046162|ref|XP_002460952.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
gi|241924329|gb|EER97473.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
Length = 796
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/384 (27%), Positives = 180/384 (46%), Gaps = 18/384 (4%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y +V + + A+ M G + VT N + V + S W++ V D
Sbjct: 188 YTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMSVP--WKEVVVLVD 245
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKIN 251
+ G+E + T N L+ + G A +F E+K+ P+ TFN + + K
Sbjct: 246 SMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYGKAR 305
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
R +EA +++M+ GC P V++Y+++I +Y + + EL EM+ +G P+VVTYT
Sbjct: 306 RHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYT 365
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
T++S L + G + A+ +M G P+ +N LI G + E + V+ ++
Sbjct: 366 TLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFD-DLRS 424
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
G PD T+NT++ +F +G + V +EM K + P T+ L+ S + G D
Sbjct: 425 AGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYI-PERDTYVSLISSYSRCGLFD 483
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRL 491
+ + ++ M+ + + DI+TY V+ L R + A LF EM D P +
Sbjct: 484 QAM-EIYKRMI-EAGIYPDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELSYSS 541
Query: 492 ILDEVKQKHMYDAAEKIEAVMKKL 515
+L H Y A+K++ MK L
Sbjct: 542 LL------HAYANAKKLDK-MKAL 558
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 124/264 (46%), Gaps = 24/264 (9%)
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCR-QYNFSKVYE 293
P+A + + + + R +A + M G P +++Y+ ++ Y + + +V
Sbjct: 183 PDASAYTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMSVPWKEVVV 242
Query: 294 LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLG 353
L+D M+ G + TY T++S + G + EA ++ ++MK G +PD FN L+ G
Sbjct: 243 LVDSMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYG 302
Query: 354 RASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPN 413
+A R +EA+ V + +M G P T+N++I+ + G E+A + +EM + KP+
Sbjct: 303 KARRHEEAIGVLK-KMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEM-EFRGMKPD 360
Query: 414 VQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLL 473
V T+ L+ + GK D L+ TY+ ++ C N C + L+
Sbjct: 361 VVTYTTLISGLDRIGKIDAALA-----------------TYSEMVRNGCSPNLCTYNALI 403
Query: 474 FKEMIGHDITPRYQTCRLILDEVK 497
H + ++ ++ D+++
Sbjct: 404 KM----HGVRGKFTEMMIVFDDLR 423
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 165/385 (42%), Gaps = 42/385 (10%)
Query: 92 VCNAIQPSHYLVNKLI--HRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQ 149
V N P+ N LI H + + + +F S GY + ++ + G+
Sbjct: 388 VRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDDLRSA-GYVPDVVTWNTLLAVFGQNGL 446
Query: 150 MDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNL 208
++ + +EM K G+I +T ++ +S G ++ A+ + + G+ + T N
Sbjct: 447 DSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNA 506
Query: 209 LLDTLCKEGKVELARSVFLEL--KSCIP------------PNAHTFN------------- 241
+L L + G+ A +F E+ + C P NA +
Sbjct: 507 VLSALARGGRWVQAEKLFAEMEDRDCKPDELSYSSLLHAYANAKKLDKMKALSEDIYAQR 566
Query: 242 IFIHGWC---------KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
I H W K+N + E + QE++ C + + ++ Y + KV
Sbjct: 567 IEPHNWLVKTLVLVNNKVNSLSETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVE 626
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
E+L M+ + TY ++M ++ GD E+ I ++K G +PD +N +IY
Sbjct: 627 EVLTLMKENSINHSAATYNSLMHMYSRLGDCEKCEAILTEIKSSGMRPDRYSYNTVIYAY 686
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
GR +++EA ++ EM +GV PD T+N I + + E+A ++ + + CKP
Sbjct: 687 GRKGQMKEASRLFS-EMKCSGVKPDIVTYNIFIKSYVANLMFEEAIDLVRYLVA-QGCKP 744
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQL 437
N +T++ +L+ + G+ E S L
Sbjct: 745 NERTYNSILEGYCRHGRMVEAKSFL 769
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 105/475 (22%), Positives = 197/475 (41%), Gaps = 73/475 (15%)
Query: 83 VFQSLKQDHVCNAIQPSHYLVNKLIH--RFKDDWKSALGIFRWAGSCPGYEHSSEIYEMM 140
+ S+K+D I+ Y N LI R + ++ A +F + G+E + +
Sbjct: 243 LVDSMKED----GIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAA-GFEPDKVTFNSL 297
Query: 141 VDILGKVRQMDQMRALLEEMSKG----HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGT 196
+D+ GK R+ ++ +L++M +VT N++ + + G E+A+ E+
Sbjct: 298 LDVYGKARRHEEAIGVLKKMENAGCTPSVVTYNSL---ISAYVKDGLLEEALELKQEMEF 354
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFI--HG------- 246
G++ + T L+ L + GK++ A + + E+ ++ PN T+N I HG
Sbjct: 355 RGMKPDVVTYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTE 414
Query: 247 -------------------WCKI------NRVD-EAQWTIQEMKGHGCHPCVISYSTIIQ 280
W + N +D E +EMK G P +Y ++I
Sbjct: 415 MMIVFDDLRSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLIS 474
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
SY R F + E+ M G P++ TY V+S LA+ G + +A ++ +M+ KP
Sbjct: 475 SYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKP 534
Query: 341 DSRFFNCLIYTLGRASR------VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHH 394
D ++ L++ A + + E +Y ++E P N + N + S
Sbjct: 535 DELSYSSLLHAYANAKKLDKMKALSEDIYAQRIE-PHNWLVKTLVLVNNKVNSLS---ET 590
Query: 395 EKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKT---GKTDECLSQLLDDMVNKHHLSLDI 451
EKAF L + C ++ + ++ K K +E L+ + ++ +N
Sbjct: 591 EKAFQEL----RRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLTLMKENSINH-----SA 641
Query: 452 TTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP-RYQTCRLILDEVKQKHMYDAA 505
TY ++H R CE + E+ + P RY +I ++ M +A+
Sbjct: 642 ATYNSLMHMYSRLGDCEKCEAILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEAS 696
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 96/200 (48%), Gaps = 23/200 (11%)
Query: 69 VIISKVHVGSSEDEVFQSLKQD------HVCNAIQPSHYLVNKLIHRFKDDWKSALGIFR 122
++ +KV+ S ++ FQ L++ +V NA+ S Y NK++ + ++ L + +
Sbjct: 579 LVNNKVNSLSETEKAFQELRRRRCSLDINVLNAMV-SIYGKNKMVKKVEE----VLTLMK 633
Query: 123 WAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGA 181
HS+ Y ++ + ++ ++ A+L E+ S G + V+ +
Sbjct: 634 ENS----INHSAATYNSLMHMYSRLGDCEKCEAILTEIKSSGMRPDRYSYNTVIYAYGRK 689
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDT----LCKEGKVELARSVFLELKSCIPPNA 237
GQ ++A R F E+ G++ + T N+ + + L E ++L R +L + C PN
Sbjct: 690 GQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANLMFEEAIDLVR--YLVAQGC-KPNE 746
Query: 238 HTFNIFIHGWCKINRVDEAQ 257
T+N + G+C+ R+ EA+
Sbjct: 747 RTYNSILEGYCRHGRMVEAK 766
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/326 (30%), Positives = 160/326 (49%), Gaps = 12/326 (3%)
Query: 184 WEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIF 243
++AV+ F EL EKNT + N+LL LC G+++ A +F E+ S PP+ T+ I
Sbjct: 238 LDEAVQLFQELP----EKNTCSYNILLKALCTAGRIKDAHQLFDEMAS--PPDVVTYGIM 291
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
+HG+C ++ ++ A + EM G ++Y+++I C + S ++++M G
Sbjct: 292 VHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGV 351
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
+ +TTVMS + GD A ++M+ G D + LI L RA ++EA
Sbjct: 352 VLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAER 411
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
V Q EM + G+ D T+ +I + G +AF V +M + + PNV T+ L
Sbjct: 412 VLQ-EMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQ-KRVTPNVVTYTALSDG 469
Query: 424 CFKTGKTDECLS-QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
K G D C + +LL +M +K L L+I TY +I+GLC+A E A +M +
Sbjct: 470 LCKQG--DVCAANELLHEMCSK-GLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGL 526
Query: 483 TPRYQTCRLILDEVKQKHMYDAAEKI 508
P T I+ + Q D A +
Sbjct: 527 KPDVYTYTTIIGALCQSKELDRAHSL 552
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 186/389 (47%), Gaps = 8/389 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQM-DQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G E + Y ++ +L Q+ D +R + + + G ++ VM F G A
Sbjct: 315 GLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAA 374
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHG 246
FDE+ GL + T L++ LC+ G+++ A V E++ + +A T+ + I G
Sbjct: 375 RNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDG 434
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
+CK+ ++ EA +M P V++Y+ + C+Q + ELL EM ++G N
Sbjct: 435 YCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELN 494
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
+ TY ++++ L K+G+ E+A+R M G KPD + +I L ++ + A + Q
Sbjct: 495 IFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQ 554
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS-CF 425
EM + G+ P T+N ++ F G E +LE M + ++ PN T++ L+K C
Sbjct: 555 -EMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLE-KNIHPNTTTYNSLMKQYCI 612
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
+ K + +++ M+++ + + TY ++I G C+A + A EMI
Sbjct: 613 E--KNMKSTTEIYKGMLSQEVVP-NENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLT 669
Query: 486 YQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
+ ++ + +K + A ++ M+K
Sbjct: 670 ASSYNALIRLLNKKKKFTEARRLFEKMRK 698
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 181/372 (48%), Gaps = 9/372 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIA--KVMRRFSGAGQWEDAVRTFDEL 194
Y +MV + +++ LL EM+ + LN +A V+ GQ DAVR +++
Sbjct: 288 YGIMVHGYCTLSELETAIKLLSEMA-ARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDM 346
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRV 253
G+ + ++ C++G + AR+ F E+ K + + T+ I+G C+ +
Sbjct: 347 VMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGEL 406
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
EA+ +QEM+ G ++Y+ +I YC+ ++ + + ++M + PNVVTYT +
Sbjct: 407 KEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTAL 466
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
L K GD A + +M G + + +N LI L +A +++A+ ++M E G
Sbjct: 467 SDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRT-MIDMDEAG 525
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
+ PD T+ T+I ++A +L+EM + KP + T++ L+ +G+ E
Sbjct: 526 LKPDVYTYTTIIGALCQSKELDRAHSLLQEMLD-KGIKPTIVTYNVLMNGFCMSGRV-EG 583
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCR-LI 492
+LL+ M+ K ++ + TTY ++ C + ++K M+ ++ P T LI
Sbjct: 584 GKRLLEWMLEK-NIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILI 642
Query: 493 LDEVKQKHMYDA 504
K ++M +A
Sbjct: 643 KGHCKARNMKEA 654
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 89/184 (48%), Gaps = 4/184 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ L + +++D+ +LL+EM KG T+ T +M F +G+ E R + +
Sbjct: 533 YTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWML 592
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVD 254
+ NT T N L+ C E ++ ++ + S + PN +T+NI I G CK +
Sbjct: 593 EKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMK 652
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ--GCPPNVVTYTT 312
EA + EM G SY+ +I+ ++ F++ L ++M+ + P+V +
Sbjct: 653 EALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYI 712
Query: 313 VMSY 316
+S+
Sbjct: 713 DLSF 716
>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
Length = 641
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/397 (25%), Positives = 171/397 (43%), Gaps = 10/397 (2%)
Query: 98 PSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALL 157
P H + H + D + IF+ Y+ + ++D + + +L
Sbjct: 24 PLHRNASDREHGIEHDPPISDKIFKSGPKMGSYKLGDSTFYSLIDNYANLGDFKSLEKVL 83
Query: 158 EEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG-TFGLEKNTETMNLLLDTLCK 215
+ M + +V + + + A E AV FD + F ++ ++ N +L+ + +
Sbjct: 84 DRMRCEKRVVVEKCFVVIFKAYGKAHLPEKAVGLFDRMAYEFECKRTVKSFNSVLNVIIQ 143
Query: 216 EG----KVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPC 271
EG +E V I PN TFN+ I CK+ VD+A ++M C P
Sbjct: 144 EGLFYRALEFYNHVIGAKGVNISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPD 203
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
V +Y T++ C+ + LLDEMQ GC P+ VT+ +++ L K GD ++ +
Sbjct: 204 VYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVD 263
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHH 391
M + G P+ +N LI+ L ++++A+ + M + P+ T+ T+I
Sbjct: 264 NMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLD-RMVSSKCVPNVVTYGTIINGLVKQ 322
Query: 392 GHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDI 451
G VL M + + N + L+ FK GK+ E + QL +M K L+
Sbjct: 323 GRALDGARVLALMEERGY-HVNEYVYSALISGLFKEGKSQEAM-QLFKEMTVK-ECELNT 379
Query: 452 TTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
Y+ VI GLCR K + A + EM + P T
Sbjct: 380 IVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYT 416
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 172/407 (42%), Gaps = 76/407 (18%)
Query: 164 HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELAR 223
+++T N + K M + G +DAV+ F ++ + + T L+D LCK +++ A
Sbjct: 168 NVLTFNLVIKTMCK---VGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAV 224
Query: 224 SVF--LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQS 281
S+ +++ C P + TFN+ I+G CK + + M GC P ++Y+T+I
Sbjct: 225 SLLDEMQIDGCFP-SPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHG 283
Query: 282 YCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPD 341
C + K LLD M + C PNVVTY T+++ L K G + R+ M+ G +
Sbjct: 284 LCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVN 343
Query: 342 SRFFNCLIYTLGRASRVQEAVYVYQ----------------------------------V 367
++ LI L + + QEA+ +++
Sbjct: 344 EYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLS 403
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNK------------LEH------ 409
EM N P+ T+++++ F G+ KA + ++M K L H
Sbjct: 404 EMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDG 463
Query: 410 ----------------CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSL-DIT 452
CKP+V + ++ G ++ L QL ++M+ + S D+
Sbjct: 464 KVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDAL-QLYNEMLCQEPDSQPDVV 522
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQK 499
TY ++++ LC+ + A L M+ P TC + L +++K
Sbjct: 523 TYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFLRTLREK 569
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 120/273 (43%), Gaps = 8/273 (2%)
Query: 149 QMDQMRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN 207
++++ +LL+ M V + T ++ G+ D R + G N +
Sbjct: 289 KLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYS 348
Query: 208 LLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKG 265
L+ L KEGK + A +F E+ K C N ++ I G C+ + DEA + EM
Sbjct: 349 ALISGLFKEGKSQEAMQLFKEMTVKEC-ELNTIVYSAVIDGLCRDGKPDEALEVLSEMTN 407
Query: 266 HGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEE 325
+ C P +YS++++ + N K E+ +M N V Y+ ++ L K G +E
Sbjct: 408 NRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKE 467
Query: 326 AIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM--PENGVAPDTSTFNT 383
A+ + +M G KPD + +I L A V++A+ +Y EM E PD T+N
Sbjct: 468 AMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYN-EMLCQEPDSQPDVVTYNI 526
Query: 384 MITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQT 416
++ +A +L M C P++ T
Sbjct: 527 LLNALCKQSSISRAIDLLNSMLD-RGCDPDLVT 558
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 121/247 (48%), Gaps = 14/247 (5%)
Query: 275 YSTIIQSYCRQYNFSKVYELLDEMQAQ-GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
+ I ++Y + + K L D M + C V ++ +V++ + + G F A+
Sbjct: 98 FVVIFKAYGKAHLPEKAVGLFDRMAYEFECKRTVKSFNSVLNVIIQEGLFYRALEFYNH- 156
Query: 334 KIVGSK-----PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF 388
++G+K P+ FN +I T+ + V +AV +++ +MP + PD T+ T++
Sbjct: 157 -VIGAKGVNISPNVLTFNLVIKTMCKVGLVDDAVQMFR-DMPVSKCQPDVYTYCTLMDGL 214
Query: 389 SHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
++A +L+EM +++ C P+ TF+ L+ K G +++L+D+M K
Sbjct: 215 CKADRIDEAVSLLDEM-QIDGCFPSPVTFNVLINGLCKKGDLAR-VAKLVDNMFLKGCAP 272
Query: 449 LDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE-VKQKHMYDAAEK 507
++T Y +IHGLC K E A L M+ P T I++ VKQ D A +
Sbjct: 273 NEVT-YNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGA-R 330
Query: 508 IEAVMKK 514
+ A+M++
Sbjct: 331 VLALMEE 337
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 156/305 (51%), Gaps = 6/305 (1%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETM-NLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHT 239
G+ EDAV+ FDE+ T G + M N L+ C GK+++A ++ + I T
Sbjct: 197 GRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVAT 256
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+N+ +H R +A ++EM+ +G P V +Y+ +I YC++ N K E+ +EM
Sbjct: 257 YNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMS 316
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
+G VTYT+++ ++ G +E R+ G +PD +N LI + ++
Sbjct: 317 QKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDME 376
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
A Y EM + + PD T+NT++ F G ++A +++EM K +P++ +++
Sbjct: 377 RA-YEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTK-RGIQPDLVSYNT 434
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
L+ G + L ++ D+M++K + + TY +I GLC+ + + A L KEM+
Sbjct: 435 LISGYSMKGDIKDAL-RVRDEMMDKG-FNPTLMTYNALIQGLCKIRQGDDAENLMKEMVA 492
Query: 480 HDITP 484
ITP
Sbjct: 493 KGITP 497
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 171/356 (48%), Gaps = 10/356 (2%)
Query: 156 LLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG-TFGLEKNTETMNLLLDTLC 214
LL +M + + VT NT V+ F G+ + A+ E+ G+ + T L+ C
Sbjct: 138 LLRQMPRPNAVTYNT---VIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWC 194
Query: 215 KEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCV 272
K G++E A VF E+ K + P+A +N I G+C + ++D A ++M G V
Sbjct: 195 KIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTV 254
Query: 273 ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEK 332
+Y+ ++ + S Y +L+EMQ G P+V TY +++ K G+ ++A+ + E+
Sbjct: 255 ATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEE 314
Query: 333 MKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
M G + + + LIY R +VQE ++ V + + G+ PD +N +I G
Sbjct: 315 MSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAV-KKGIRPDVVMYNALINSHCTGG 373
Query: 393 HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
E+A+ ++ EM K + P+ T++ L++ G+ DE + L+D+M K + D+
Sbjct: 374 DMERAYEIMAEMEK-KRIPPDDMTYNTLMRGFCLLGRLDEART-LIDEM-TKRGIQPDLV 430
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+Y +I G + A + EM+ P T ++ + + D AE +
Sbjct: 431 SYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENL 486
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 113/224 (50%), Gaps = 4/224 (1%)
Query: 133 SSEIYEMMVDILGKVRQMDQMRAL--LEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVR 189
S +++ + I G ++ ++ +AL EEMS KG T T ++ FS GQ ++ R
Sbjct: 286 SPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDR 345
Query: 190 TFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWC 248
F+ G+ + N L+++ C G +E A + E+ K IPP+ T+N + G+C
Sbjct: 346 LFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFC 405
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
+ R+DEA+ I EM G P ++SY+T+I Y + + + DEM +G P ++
Sbjct: 406 LLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLM 465
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
TY ++ L K ++A + ++M G PD + LI L
Sbjct: 466 TYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGL 509
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 147/313 (46%), Gaps = 5/313 (1%)
Query: 76 VGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGI-FRWAGSCPGYEHSS 134
+G ED V + + + PS + N LI + D K + + +R G +
Sbjct: 196 IGRMEDAV-KVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTV 254
Query: 135 EIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDE 193
Y +++ L + A+LEEM K G + T ++ + G + A+ F+E
Sbjct: 255 ATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEE 314
Query: 194 LGTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINR 252
+ G+ T L+ ++G+V+ +F + +K I P+ +N I+ C
Sbjct: 315 MSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGD 374
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
++ A + EM+ P ++Y+T+++ +C + L+DEM +G P++V+Y T
Sbjct: 375 MERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNT 434
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN 372
++S + GD ++A+R+ ++M G P +N LI L + + +A + + EM
Sbjct: 435 LISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMK-EMVAK 493
Query: 373 GVAPDTSTFNTMI 385
G+ PD ST+ ++I
Sbjct: 494 GITPDDSTYISLI 506
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 100/208 (48%), Gaps = 8/208 (3%)
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRIT 330
C +++ +++ C + ELL +M PN VTY TV++ G + A+ +
Sbjct: 115 CTTTFNIMLRHLCATGKPVRALELLRQMPR----PNAVTYNTVIAGFCARGRVQAALEVM 170
Query: 331 EKMKIVGS-KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFS 389
+M+ G PD + LI + R+++AV V+ + + VAP +N +I +
Sbjct: 171 REMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYC 230
Query: 390 HHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSL 449
G + A E+M + V T++ L+ + F + + + +L++M K+ S
Sbjct: 231 DVGKLDVALQYREDMVQ-RGIAMTVATYNLLMHALFMDARASDAYA-VLEEM-QKNGFSP 287
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEM 477
D+ TY ++I+G C+ + A +F+EM
Sbjct: 288 DVFTYNILINGYCKEGNEKKALEVFEEM 315
>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
Length = 845
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 147/294 (50%), Gaps = 7/294 (2%)
Query: 191 FDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKI 250
FD++ G ++ + L++ LC+ G+++ A +F E+ P+ H + + G C
Sbjct: 211 FDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQ---PDMHMYAALVKGLCNA 267
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
R +E ++ MK G P +Y+ ++ CR+ + E+L EM +G P VVT
Sbjct: 268 ERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTC 327
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
T V++ K G +A+R+ E MK+ G KP+ +N L+ +V +A+ + +M
Sbjct: 328 TAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLN-KMR 386
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKT 430
GV PD T+N +I GH E AF +L M + + T++ L+ + K G+T
Sbjct: 387 ACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEG-DGLIADQYTYNALINALCKDGRT 445
Query: 431 DECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
D+ S L D + + + T+ +I+GLC++ K + A+ ++M+ TP
Sbjct: 446 DQACS--LFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTP 497
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 173/367 (47%), Gaps = 6/367 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G+ S+ Y +VD + R+ + +L+EM KG + T V+ + G+ DA
Sbjct: 284 GWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDA 343
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHG 246
+R + + G + N T N L+ C EGKV A ++ ++++C + P+A T+N+ I G
Sbjct: 344 LRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRG 403
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C ++ A ++ M+G G +Y+ +I + C+ + L D ++ +G PN
Sbjct: 404 QCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPN 463
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
VT+ ++++ L KSG + A + EKM G PD+ ++ I L + QE + +
Sbjct: 464 AVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLS-FI 522
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
EM + V P T + +I ++ EM C P+V T+ +++
Sbjct: 523 GEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVS-SGCNPDVVTYTTSMRAYCI 581
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
G+ +E + L++ ++K+ +++D Y ++ G + + A + K+M P
Sbjct: 582 EGRLNEAENVLME--MSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQ 639
Query: 487 QTCRLIL 493
T ++L
Sbjct: 640 FTYFILL 646
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 160/379 (42%), Gaps = 55/379 (14%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTF 240
G E A R + GL + T N L++ LCK+G+ + A S+F L++ I PNA TF
Sbjct: 408 GHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTF 467
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
N I+G CK + D A +++M GC P +YS+ I+ C+ + + EM
Sbjct: 468 NSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQ 527
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
+ P+ V YT V+ L K ++ R +M G PD + + R+ E
Sbjct: 528 KDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNE 587
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCK--------- 411
A V +EM +NGV DT +NT++ + G + A +L++M +
Sbjct: 588 AENVL-MEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILL 646
Query: 412 ------------------------------------------PNVQTFHPLLKSCFKTGK 429
PN T+ +L+ + G+
Sbjct: 647 RHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGR 706
Query: 430 TDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTC 489
T+E S L ++ + +SL+ YT ++ C++ + A++L MI H P+ +
Sbjct: 707 TEEATS--LVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSY 764
Query: 490 RLILDEVKQKHMYDAAEKI 508
+ +L + + D A++I
Sbjct: 765 QHLLSGLICEGQTDKAKEI 783
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 141/330 (42%), Gaps = 37/330 (11%)
Query: 209 LLDTLCKEGKVELARSVFLELKSCIPP--NAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
LL L + LA +F + PP A T+N I C+ + A + M
Sbjct: 123 LLAHLSRFALAPLALRLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLARALRYLSLMVRS 182
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
G P +++++I YCR +L D+M +G +VV+Y T++ L ++G +EA
Sbjct: 183 GWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEA 242
Query: 327 IRI-------------------------------TEKMKIVGSKPDSRFFNCLIYTLGRA 355
+ + +MK +G +P +R + ++ R
Sbjct: 243 VELFGEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRE 302
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQ 415
+ +EA + Q EM E G+AP T +I + G A VLE M KL CKPNV
Sbjct: 303 RKAKEAEEMLQ-EMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELM-KLRGCKPNVW 360
Query: 416 TFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFK 475
T++ L++ GK + ++ LL+ M ++ D TY L+I G C E A+ L +
Sbjct: 361 TYNALVQGFCNEGKVHKAMT-LLNKM-RACGVNPDAVTYNLLIRGQCIDGHIESAFRLLR 418
Query: 476 EMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
M G + T +++ + + D A
Sbjct: 419 LMEGDGLIADQYTYNALINALCKDGRTDQA 448
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/370 (19%), Positives = 143/370 (38%), Gaps = 28/370 (7%)
Query: 83 VFQSLKQDHVCNAIQPSHYLVNKLIHRFKDD--WKSALGIFRWAGSCPGYEHSSEIYEMM 140
+F SL+ + + L+N L K D WK L AG P S E +
Sbjct: 451 LFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWK-FLEKMVSAGCTPDTYTYSSFIEHL 509
Query: 141 VDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLE 200
+ G + + +L++ K V + + + G RT+ E+ + G
Sbjct: 510 CKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGL---VARTWGEMVSSGCN 566
Query: 201 KNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWT 259
+ T + C EG++ A +V +E+ K+ + + +N + G I + D A
Sbjct: 567 PDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSI 626
Query: 260 IQEMKGHGCHPCVISYSTIIQSYCRQ-----------------YNFSKVYELLDEMQAQG 302
+++M P +Y +++ R + V+ L D M+
Sbjct: 627 LKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNE 686
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
PN TY++++ ++ G EEA + MK + + L+ ++ R +A
Sbjct: 687 FLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDA- 745
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMN-KLEHCKPNVQTFHPLL 421
+V M ++G P ++ +++ G +KA + MN + + P+ + ++
Sbjct: 746 WVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIF--MNSRWKDYSPDEIVWKVII 803
Query: 422 KSCFKTGKTD 431
K G +D
Sbjct: 804 DGLIKKGHSD 813
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 93/221 (42%), Gaps = 26/221 (11%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK--------------GHIVTLNTIAKVMRRFSGAG 182
Y ++D + Q D ++L++M+ H+V + + V+ + AG
Sbjct: 607 YNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLP-LTPAG 665
Query: 183 QWEDAVRTFDELGTFGLEK------NTETMNLLLDTLCKEGKVELARSVFLELK-SCIPP 235
W+ A+ D G F + K N+ T + +L+ ++G+ E A S+ +K I
Sbjct: 666 VWK-AIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISL 724
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
N + + +CK R +A + M HG P ++SY ++ + K E+
Sbjct: 725 NEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIF 784
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFE---EAIRITEKM 333
+ + P+ + + ++ L K G + E I + E+M
Sbjct: 785 MNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERM 825
>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
Length = 468
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/431 (24%), Positives = 195/431 (45%), Gaps = 9/431 (2%)
Query: 82 EVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMV 141
EVF+++K + ++ + L+N + ++ AL +F+ E Y ++
Sbjct: 31 EVFETMKSESCVPSLVTYNVLINSRCN--AGEFGKALDLFQSMKREKRVEPDRWTYNTLI 88
Query: 142 DILGKVRQMDQMRALLEEMSKGHIVT-LNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLE 200
L + R LL EM +I + T + +++ + E++ + +E+ G
Sbjct: 89 SGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCN 148
Query: 201 KNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWT 259
+ N ++ + +E AR V+ + +S P+ +++I IHG KI ++DE+
Sbjct: 149 PDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKI 208
Query: 260 IQEM--KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
+ EM + G P VI++ST+I CR K E+ M GC PN TYTT+++ L
Sbjct: 209 LSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGL 268
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
++ +A + EKM PD+ +N LI + + EA +Y+ G+ P
Sbjct: 269 CRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPT 328
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
TFNT+I F G +A ++ EM + + T+ L+ + K DE L ++
Sbjct: 329 IVTFNTLIDGFCKLGKLGRANELVAEMGT-KGLAADTCTYRILIAGLSRATKLDEAL-EV 386
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVK 497
M K L LD + + GLC+ + AY +F+ P +T R++ + +
Sbjct: 387 YKQMREKKFL-LDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLI 445
Query: 498 QKHMYDAAEKI 508
+ + A+K+
Sbjct: 446 KLGRVEDAQKL 456
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 158/326 (48%), Gaps = 9/326 (2%)
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK--S 231
V++ + AG A+ F+ + + + T N+L+++ C G+ A +F +K
Sbjct: 16 VVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMKREK 75
Query: 232 CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKV 291
+ P+ T+N I G C + A+ + EM+ V +YS+II+S ++ +
Sbjct: 76 RVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEES 135
Query: 292 YELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYT 351
Y++L+EM A GC P+V + VM A+S + E+A + + M G KPD+ ++ LI+
Sbjct: 136 YKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHG 195
Query: 352 LGRASRVQEAVYVY-QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE-H 409
L + ++ E++ + ++ M G P+ TF+T+I G EKA V M LE
Sbjct: 196 LAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSM--LEAG 253
Query: 410 CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEW 469
CKPN T+ L+ + K + +L + M + + D Y +I G C+ +
Sbjct: 254 CKPNKYTYTTLIAGLCRAEKVIQA-RELFEKMT-QACIPPDAVAYNSLIAGYCKRGSMDE 311
Query: 470 AYLLFKEMIGH-DITPRYQTCRLILD 494
A L++EM G + P T ++D
Sbjct: 312 AEKLYREMSGGAGLQPTIVTFNTLID 337
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 129/276 (46%), Gaps = 4/276 (1%)
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
++ + K + +A + MK C P +++Y+ +I S C F K +L
Sbjct: 9 GGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLF 68
Query: 296 DEMQAQG-CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGR 354
M+ + P+ TY T++S L SG+ E A ++ +M+ + ++ +I +L +
Sbjct: 69 QSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVK 128
Query: 355 ASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNV 414
++ +E+ V + EM G PD FN ++ F+ + EKA V + M + + KP+
Sbjct: 129 EAKPEESYKVLE-EMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGY-KPDN 186
Query: 415 QTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLF 474
++H L+ K GK DE L L + + ++ T++ +IHGLCR + E A +F
Sbjct: 187 VSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVF 246
Query: 475 KEMIGHDITP-RYQTCRLILDEVKQKHMYDAAEKIE 509
M+ P +Y LI + + + A E E
Sbjct: 247 GSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFE 282
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 88/187 (47%), Gaps = 3/187 (1%)
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
M C Y V+ LAK+G +A+ + E MK P +N LI + A
Sbjct: 1 MSKAKCAIGGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGE 60
Query: 358 VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTF 417
+A+ ++Q E V PD T+NT+I+ G+ E A +L EM ++ NV T+
Sbjct: 61 FGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRD-KNIAANVFTY 119
Query: 418 HPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
++KS K K +E ++L++M+ + D+ + V+ G R+N E A +++ M
Sbjct: 120 SSIIKSLVKEAKPEESY-KVLEEMM-AAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHM 177
Query: 478 IGHDITP 484
+ P
Sbjct: 178 VESGYKP 184
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 112/248 (45%), Gaps = 18/248 (7%)
Query: 98 PSHYLVNKLIHRF--KDDWKSALGIFRWAGSC--PGYEHSSEIYEMMVDILGKVRQMDQM 153
P+ + LIH + + AL +F GS G + + Y ++ L + ++ Q
Sbjct: 221 PNVITFSTLIHGLCRTGELEKALEVF---GSMLEAGCKPNKYTYTTLIAGLCRAEKVIQA 277
Query: 154 RALLEEMSKGHI----VTLNT-IAKVMRRFSGAGQWEDAVRTFDEL-GTFGLEKNTETMN 207
R L E+M++ I V N+ IA +R G ++A + + E+ G GL+ T N
Sbjct: 278 RELFEKMTQACIPPDAVAYNSLIAGYCKR----GSMDEAEKLYREMSGGAGLQPTIVTFN 333
Query: 208 LLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
L+D CK GK+ A + E+ + + + T+ I I G + ++DEA ++M+
Sbjct: 334 TLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREK 393
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
+S + + C+ N + Y + + + G PN T+ + L K G E+A
Sbjct: 394 KFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDA 453
Query: 327 IRITEKMK 334
++ E K
Sbjct: 454 QKLMEPAK 461
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 72/170 (42%), Gaps = 25/170 (14%)
Query: 146 KVRQMDQMRALLEEMSKGH-----IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLE 200
K MD+ L EMS G IVT NT+ + F G+ A E+GT GL
Sbjct: 305 KRGSMDEAEKLYREMSGGAGLQPTIVTFNTL---IDGFCKLGKLGRANELVAEMGTKGLA 361
Query: 201 KNTETMNLLLDTLCKEGKVELARSVFLELK---------SCIPPNAHTFNIFIHGWCKIN 251
+T T +L+ L + K++ A V+ +++ SC+ F+ G CK
Sbjct: 362 ADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVS--------FVGGLCKTG 413
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ 301
+D+A + + G P ++ + +S + +L++ +A+
Sbjct: 414 NIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKAR 463
>gi|357141094|ref|XP_003572081.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial-like [Brachypodium distachyon]
Length = 541
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 177/362 (48%), Gaps = 19/362 (5%)
Query: 169 NTIAKVMRRFSGAGQWEDAVRTFDEL-----------GTFGLEKNTETMNLLLDTLCKEG 217
+ A ++RR++ G+ A+R F L G T +N+ + LCKEG
Sbjct: 105 DAFAPLIRRYARLGRATAALRAFHFLRRHPDRYSVVDGGDCSPAATCLLNMTVGALCKEG 164
Query: 218 KVELARSVFLELK---SCIP-PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI 273
A + + +P P+ T+N+ + GW R+++ + EM+ G V+
Sbjct: 165 HPRPAAKLIQRCRHEEGTLPAPDERTYNMLLDGWSSARRLEKVEKLWAEMRLAGVRSTVV 224
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
SY T+I++ C + K LLDEM+ QG N++T ++ LA +G F++A ++ EK
Sbjct: 225 SYGTLIKALCMMQHPDKAASLLDEMREQGIEANLLTCNPIVYSLALAGRFQDAYKLLEKF 284
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
+ G P+ FN L+ + + A V + M G+ P T+N F+ +
Sbjct: 285 PLYGVAPNISTFNSLVLGYCKYGDLAGASSVLKA-MIGRGILPTAKTYNYFFVFFAKTCN 343
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
E ++ +M + P+ T++ L+K + + E + Q++ +M S D+ T
Sbjct: 344 VELGMNLYNKMVNNGYA-PDQITYNLLIKMLCEANRL-ELVVQMIKEMKTSGFES-DLAT 400
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
T++IH LCR+++ E A + F++M + P+Y T R+++ E+K+ + + EK+ +M+
Sbjct: 401 STMLIHLLCRSHQFEEACVEFEDMFRRGLVPQYITYRMLMKEIKRLGLVELVEKLTNLMR 460
Query: 514 KL 515
+
Sbjct: 461 SV 462
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 113/255 (44%), Gaps = 7/255 (2%)
Query: 112 DDWKSALGIFR----WAG-SCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI- 165
D W SA + + WA G + Y ++ L ++ D+ +LL+EM + I
Sbjct: 196 DGWSSARRLEKVEKLWAEMRLAGVRSTVVSYGTLIKALCMMQHPDKAASLLDEMREQGIE 255
Query: 166 VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSV 225
L T ++ + AG+++DA + ++ +G+ N T N L+ CK G + A SV
Sbjct: 256 ANLLTCNPIVYSLALAGRFQDAYKLLEKFPLYGVAPNISTFNSLVLGYCKYGDLAGASSV 315
Query: 226 FLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCR 284
+ I P A T+N F + K V+ +M +G P I+Y+ +I+ C
Sbjct: 316 LKAMIGRGILPTAKTYNYFFVFFAKTCNVELGMNLYNKMVNNGYAPDQITYNLLIKMLCE 375
Query: 285 QYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRF 344
V +++ EM+ G ++ T T ++ L +S FEEA E M G P
Sbjct: 376 ANRLELVVQMIKEMKTSGFESDLATSTMLIHLLCRSHQFEEACVEFEDMFRRGLVPQYIT 435
Query: 345 FNCLIYTLGRASRVQ 359
+ L+ + R V+
Sbjct: 436 YRMLMKEIKRLGLVE 450
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 158/304 (51%), Gaps = 6/304 (1%)
Query: 205 TMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
T N+L++ C+ ++ LA ++ ++ K P+ T + ++G+C R+ +A + +M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 264 KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF 323
G P I+++T+I S+ L+D M +GC PN+VTY V++ L K GD
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241
Query: 324 EEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNT 383
+ A+ + KM+ + D FN +I +L + V +A+ +++ EM G+ P+ T+++
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFK-EMETKGIRPNVVTYSS 300
Query: 384 MITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVN 443
+I+ +G A +L +M + + PN+ TF+ L+ + K GK E +L DDM+
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIE-KKINPNLVTFNALIDAFVKEGKFVEA-EKLYDDMI- 357
Query: 444 KHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCR-LILDEVKQKHMY 502
K + DI TY +++G C ++ + A +F+ M+ D P T LI K K +
Sbjct: 358 KRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVE 417
Query: 503 DAAE 506
D E
Sbjct: 418 DGTE 421
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 186/386 (48%), Gaps = 8/386 (2%)
Query: 132 HSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRT 190
H Y ++++ + Q+ ALL +M K G+ ++ T++ ++ + + DAV
Sbjct: 118 HGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 177
Query: 191 FDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWC 248
D++ G +T T L+ L K A ++ + + C PN T+ + ++G C
Sbjct: 178 VDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGC-QPNLVTYGVVVNGLC 236
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
K D A + +M+ V+ ++TII S C+ + L EM+ +G PNVV
Sbjct: 237 KRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 296
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
TY++++S L G + +A ++ M P+ FN LI + + EA +Y +
Sbjct: 297 TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYD-D 355
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M + + PD T+N+++ F H +KA + E M + C P+V T++ L+K K+
Sbjct: 356 MIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVS-KDCFPDVVTYNTLIKGFCKSK 414
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ ++ ++L +M ++ L D TYT +I GL C+ A +FK+M+ + P T
Sbjct: 415 RVEDG-TELFREMSHRG-LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMT 472
Query: 489 CRLILDEVKQKHMYDAAEKIEAVMKK 514
++LD + + A ++ M+K
Sbjct: 473 YSILLDGLCNNGKLEKALEVFDYMQK 498
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 164/368 (44%), Gaps = 40/368 (10%)
Query: 183 QWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFN 241
+ +AV D + G + N T ++++ LCK G +LA ++ ++++ I + FN
Sbjct: 205 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFN 264
Query: 242 IFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ 301
I CK VD+A +EM+ G P V++YS++I C +S +LL +M +
Sbjct: 265 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 324
Query: 302 GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM---------------------------- 333
PN+VT+ ++ K G F EA ++ + M
Sbjct: 325 KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKA 384
Query: 334 ----KIVGSK---PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
+ + SK PD +N LI ++ RV++ +++ EM G+ DT T+ T+I
Sbjct: 385 KQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFR-EMSHRGLVGDTVTYTTLIQ 443
Query: 387 MFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHH 446
H G + A V ++M + P++ T+ LL GK ++ L D + K
Sbjct: 444 GLFHDGDCDNAQKVFKQMVS-DGVPPDIMTYSILLDGLCNNGKLEKALEVF--DYMQKSE 500
Query: 447 LSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAE 506
+ LDI YT +I G+C+A K + + LF + + P T ++ + K + A
Sbjct: 501 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 560
Query: 507 KIEAVMKK 514
+ MK+
Sbjct: 561 ALLKKMKE 568
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 148/293 (50%), Gaps = 4/293 (1%)
Query: 131 EHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVR 189
E I+ ++D L K R +D L +EM +KG + T + ++ G+W DA +
Sbjct: 257 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 316
Query: 190 TFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWC 248
++ + N T N L+D KEGK A ++ ++ K I P+ T+N ++G+C
Sbjct: 317 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFC 376
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
+R+D+A+ + M C P V++Y+T+I+ +C+ EL EM +G + V
Sbjct: 377 MHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 436
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
TYTT++ L GD + A ++ ++M G PD ++ L+ L ++++A+ V+
Sbjct: 437 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY- 495
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLL 421
M ++ + D + TMI G + + + ++ L+ KPNV T++ ++
Sbjct: 496 MQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS-LKGVKPNVVTYNTMI 547
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 120/255 (47%), Gaps = 10/255 (3%)
Query: 149 QMDQMRALLEEM-SKG---HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTE 204
++D+ + + E M SK +VT NT+ K F + + ED F E+ GL +T
Sbjct: 380 RLDKAKQMFEFMVSKDCFPDVVTYNTLIK---GFCKSKRVEDGTELFREMSHRGLVGDTV 436
Query: 205 TMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
T L+ L +G + A+ VF ++ S +PP+ T++I + G C ++++A M
Sbjct: 437 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 496
Query: 264 KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF 323
+ + Y+T+I+ C+ ++L + +G PNVVTY T++S L
Sbjct: 497 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 556
Query: 324 EEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNT 383
+EA + +KMK G P+S +N LI R + + + EM D ST
Sbjct: 557 QEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIR-EMRSCRFVGDASTIGL 615
Query: 384 MITMFSHHGHHEKAF 398
+ M H G +K+F
Sbjct: 616 VANML-HDGRLDKSF 629
>gi|15218855|ref|NP_171855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180297|sp|Q9LR67.1|PPR9_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g03560, mitochondrial; Flags: Precursor
gi|9280662|gb|AAF86531.1|AC002560_24 F21B7.18 [Arabidopsis thaliana]
gi|332189465|gb|AEE27586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/433 (25%), Positives = 188/433 (43%), Gaps = 75/433 (17%)
Query: 117 ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVM 175
A F W+ Y H+ E Y +VD+L + +D++R + E+ K +T++ ++
Sbjct: 135 AWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALI 194
Query: 176 RRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IP 234
+ F G E+ + + ++ G+E T N L++ L V+ A VF ++S I
Sbjct: 195 KSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIK 254
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQS------------- 281
P+ T+N I G+CK + +A +++M+ G I+Y T+IQ+
Sbjct: 255 PDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVAL 314
Query: 282 ----------------------YCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK 319
C++ ++ Y + + M +G PNV YT ++ AK
Sbjct: 315 YQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAK 374
Query: 320 SGDFEEAIRITEKMKIVGSKPD-----------------------------------SRF 344
SG E+AIR+ +M G KPD S F
Sbjct: 375 SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMF 434
Query: 345 FNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
++ LI LG+A RV EA +++ EM E G D+ +N +I F+ H ++A + + M
Sbjct: 435 YSSLIDGLGKAGRVDEAERLFE-EMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRM 493
Query: 405 NKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRA 464
+ E C V T+ LL FK + +E L +L D M++K ++ + + GLC +
Sbjct: 494 EEEEGCDQTVYTYTILLSGMFKEHRNEEAL-KLWDMMIDK-GITPTAACFRALSTGLCLS 551
Query: 465 NKCEWAYLLFKEM 477
K A + E+
Sbjct: 552 GKVARACKILDEL 564
>gi|255546465|ref|XP_002514292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546748|gb|EEF48246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 608
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 182/384 (47%), Gaps = 13/384 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVM-RRFSGAGQWEDAVRTFDELG 195
Y +V L K++ + + L+ ++ + + + + M FS +G ++A++ F ++
Sbjct: 96 YTTLVAALTKLKHFESIFLLISKVEENGMKPDSILYNAMINAFSESGNVKEAMKIFQKMK 155
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKINRV 253
G + T T N L+ GK E + + L + PN T+NI + WC +
Sbjct: 156 DTGCKPTTSTFNTLIKGYGNAGKPEEGLKMLHLMSLDGSVKPNDRTYNILVRAWCSKKNI 215
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
+EA + +M G P V++Y+ + ++Y ++ + +L+ EMQ + PN T +
Sbjct: 216 EEAWNVLHKMVASGIQPDVVTYNILARAYAQKGETLRAEDLILEMQYEKVAPNERTCGII 275
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI---YTLGRASRVQEAVYVYQVEMP 370
++ K G+ EA+R +MK +G P+ FN LI + V EA+ + M
Sbjct: 276 VNGYCKEGNMIEALRFVYRMKELGVHPNLVIFNSLIKGFLDITDTDGVDEALTL----ME 331
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKT 430
E GV PD TF+T++ +S G +K + +M K +P++ F L K + G+T
Sbjct: 332 EYGVKPDVITFSTIMNAWSSAGLMDKCQEIFNDMAK-AGIEPDIHAFSILAKGYVRAGET 390
Query: 431 DECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCR 490
+ S L + K + ++ T +I G C A K E A +++++M I+P +T
Sbjct: 391 ENAESVLTS--MAKSGVRPNVVICTTIISGWCSAGKMENAKMVYEKMCEIGISPNLKTFE 448
Query: 491 LILDEVKQKHMYDAAEKIEAVMKK 514
++ + AE++ +M++
Sbjct: 449 TLIWGYAEARQPGKAEELLQLMEE 472
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 112/209 (53%), Gaps = 3/209 (1%)
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA + G P +I+Y+T++ + + +F ++ L+ +++ G P+ + Y ++
Sbjct: 76 EANLIFDNLVEDGHRPTLITYTTLVAALTKLKHFESIFLLISKVEENGMKPDSILYNAMI 135
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
+ ++SG+ +EA++I +KMK G KP + FN LI G A + +E + + + + V
Sbjct: 136 NAFSESGNVKEAMKIFQKMKDTGCKPTTSTFNTLIKGYGNAGKPEEGLKMLHLMSLDGSV 195
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
P+ T+N ++ + + E+A++VL +M +P+V T++ L ++ + G+T
Sbjct: 196 KPNDRTYNILVRAWCSKKNIEEAWNVLHKM-VASGIQPDVVTYNILARAYAQKGETLRAE 254
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCR 463
+L+ K ++ + T ++++G C+
Sbjct: 255 DLILEMQYEK--VAPNERTCGIIVNGYCK 281
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 83/184 (45%), Gaps = 5/184 (2%)
Query: 150 MDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNL 208
+D+ L+EE K ++T +TI M +S AG + F+++ G+E + ++
Sbjct: 323 VDEALTLMEEYGVKPDVITFSTI---MNAWSSAGLMDKCQEIFNDMAKAGIEPDIHAFSI 379
Query: 209 LLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG 267
L + G+ E A SV + KS + PN I GWC +++ A+ ++M G
Sbjct: 380 LAKGYVRAGETENAESVLTSMAKSGVRPNVVICTTIISGWCSAGKMENAKMVYEKMCEIG 439
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
P + ++ T+I Y K ELL M+ +G P T V G EA
Sbjct: 440 ISPNLKTFETLIWGYAEARQPGKAEELLQLMEEKGVFPEKSTIQLVADAWRNIGLLCEAK 499
Query: 328 RITE 331
RIT+
Sbjct: 500 RITK 503
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 89/183 (48%), Gaps = 13/183 (7%)
Query: 164 HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELAR 223
++V N++ K + ++A+ +E +G++ + T + +++ G ++ +
Sbjct: 303 NLVIFNSLIKGFLDITDTDGVDEALTLMEE---YGVKPDVITFSTIMNAWSSAGLMDKCQ 359
Query: 224 SVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSY 282
+F ++ K+ I P+ H F+I G+ + + A+ + M G P V+ +TII +
Sbjct: 360 EIFNDMAKAGIEPDIHAFSILAKGYVRAGETENAESVLTSMAKSGVRPNVVICTTIISGW 419
Query: 283 C---RQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKS---GDFEEAIRITEKMKIV 336
C + N VYE + E+ G PN+ T+ T++ A++ G EE +++ E+ +
Sbjct: 420 CSAGKMENAKMVYEKMCEI---GISPNLKTFETLIWGYAEARQPGKAEELLQLMEEKGVF 476
Query: 337 GSK 339
K
Sbjct: 477 PEK 479
>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
Length = 831
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 150/300 (50%), Gaps = 6/300 (2%)
Query: 205 TMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQE 262
+ ++L+D CK ++ A ++ ++ +C+P N T+N F++G + R+ +AQ +E
Sbjct: 484 SYSILIDGFCKIDELGRAEKLYKQMIDLNCVP-NVTTYNAFLNGLMRKGRIADAQGVYEE 542
Query: 263 MKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGD 322
M GC P VI+YST+I + + +EL + M ++GC PN VTY ++ L K
Sbjct: 543 MVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESK 602
Query: 323 FEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFN 382
+EA + KM G PD + L+Y ++++AV V+ EM G PD +N
Sbjct: 603 PDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFD-EMVSKGHDPDVVAYN 661
Query: 383 TMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMV 442
++ F G +A + + M CKP+ + + ++ K + D+ + ++ + M
Sbjct: 662 CLLKGFFRAGKPGEAKQLFQVMVS-RQCKPDTVSHNIMIDGLSKAKRLDDAV-EVFERME 719
Query: 443 NKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMY 502
H S D+ TY +I GLC + A +FKE+ ++P ++L+ +K +Y
Sbjct: 720 QDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAIKCGIVY 779
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 148/273 (54%), Gaps = 6/273 (2%)
Query: 207 NLLLDTLCKEGKVELARSVFLELKS--CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
N LL++LCK KV A ++F + S P+ +++I I G+CKI+ + A+ ++M
Sbjct: 450 NSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMI 509
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
C P V +Y+ + R+ + + +EM A GC P+V+TY+T++ + + +
Sbjct: 510 DLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHD 569
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTM 384
+A + E M G +P++ +NCL++ L + S+ EA +++ +M E G PD T+ T+
Sbjct: 570 QAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFR-KMVERGCDPDRVTYTTL 628
Query: 385 ITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK 444
+ F + G E+A V +EM H P+V ++ LLK F+ GK E QL MV++
Sbjct: 629 LYGFCNVGKIEQAVEVFDEMVSKGH-DPDVVAYNCLLKGFFRAGKPGEA-KQLFQVMVSR 686
Query: 445 HHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
D ++ ++I GL +A + + A +F+ M
Sbjct: 687 -QCKPDTVSHNIMIDGLSKAKRLDDAVEVFERM 718
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 145/290 (50%), Gaps = 5/290 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +++D K+ ++ + L ++M + V + T + G+ DA ++E+
Sbjct: 485 YSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMV 544
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRV 253
G + T + L+ K + A +F + + C PNA T+N +HG CK ++
Sbjct: 545 AAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGC-RPNAVTYNCLLHGLCKESKP 603
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
DEA ++M GC P ++Y+T++ +C + E+ DEM ++G P+VV Y +
Sbjct: 604 DEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCL 663
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
+ ++G EA ++ + M KPD+ N +I L +A R+ +AV V++ ++G
Sbjct: 664 LKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHG 723
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
+PD T+N++I +A V +E+++L+ P+ F+ LL++
Sbjct: 724 CSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLK-LSPDPHAFNVLLEA 772
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 134/297 (45%), Gaps = 11/297 (3%)
Query: 202 NTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQ 261
N L LCK GK+E A ++ + + +++ I + R+D+A+
Sbjct: 304 NNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACL 363
Query: 262 EMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSG 321
E+ G P + ++IQ C+ LL+ M +G P++ T++ +++ L K+
Sbjct: 364 EIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKAD 423
Query: 322 DFEEAIRITEKM--KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTS 379
+EA + M KI +N L+ +L +A +V +A ++ + E PD
Sbjct: 424 KIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVV 483
Query: 380 TFNTMITMF---SHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQ 436
+++ +I F G EK + + ++N C PNV T++ L + G+ +
Sbjct: 484 SYSILIDGFCKIDELGRAEKLYKQMIDLN----CVPNVTTYNAFLNGLMRKGRIADA-QG 538
Query: 437 LLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
+ ++MV S D+ TY+ +IHG A K + A+ LF+ MI P T +L
Sbjct: 539 VYEEMV-AAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLL 594
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/438 (21%), Positives = 181/438 (41%), Gaps = 49/438 (11%)
Query: 113 DWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTI 171
D AL FRW + ++H Y ++D L + R + Q + E+M ++G + T
Sbjct: 109 DGGEALTFFRWLQA-RNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTY 167
Query: 172 AKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK-VELARSVFLELK 230
A +++ ++AVR F E+ G + ++ + + L GK E +R +L+
Sbjct: 168 AVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLE 227
Query: 231 SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSK 290
+ + + ++ EA + M GC P YS ++ ++C+ N +
Sbjct: 228 KRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDE 287
Query: 291 VYELLDEMQAQG-CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK--IVGSKPDSRFFNC 347
++L EM + P N V +T +S L KSG E+A M+ + S+P
Sbjct: 288 AFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPVYDMLIR 347
Query: 348 LIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKL 407
L+ GR + +EA +E+ + P + T +++I G + A +LE M K
Sbjct: 348 LLIESGRIDKAEEAC----LEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKR 403
Query: 408 EHCKPNVQT-------------------------------------FHPLLKSCFKTGKT 430
+C P++ T ++ LL S K K
Sbjct: 404 GYC-PDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKV 462
Query: 431 DECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCR 490
+ + + MV++ D+ +Y+++I G C+ ++ A L+K+MI + P T
Sbjct: 463 HQAFA-IFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYN 521
Query: 491 LILDEVKQKHMYDAAEKI 508
L+ + +K A+ +
Sbjct: 522 AFLNGLMRKGRIADAQGV 539
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/281 (20%), Positives = 112/281 (39%), Gaps = 8/281 (2%)
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
+ T+N + + + +A ++M G P +Y+ ++QS C + N +
Sbjct: 128 DVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAVRFF 187
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
EM +G P+ Y V L +G E R+ + + L+
Sbjct: 188 GEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQ 247
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQ 415
+ EA +++ M ++G PD + ++ M+ + ++AF + EM N
Sbjct: 248 DKAIEASKLFRA-MVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNV 306
Query: 416 TFHPLLKSCFKTGKTDECLS--QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLL 473
+ L K+GK ++ + + + ++ D+ L+ G R +K E A L
Sbjct: 307 AWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPVYDMLIRLLIESG--RIDKAEEACL- 363
Query: 474 FKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
E+ G +I P TC ++ E+ + D+A + M K
Sbjct: 364 --EIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIK 402
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 173/362 (47%), Gaps = 27/362 (7%)
Query: 165 IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARS 224
+VT ++ VM + AG E AV ++ GL+ N T L+D CK+G ++ A
Sbjct: 330 VVTFTSLIHVMCK---AGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALL 386
Query: 225 VFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYC 283
+K C I P+ +N I+G+C + R+DEA+ + EM+ G P V++YSTII +YC
Sbjct: 387 AVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYC 446
Query: 284 RQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSR 343
+ + +EL +M +G P+ +TY++++ L +A + + M +G +PD
Sbjct: 447 KNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEF 506
Query: 344 FFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG----------- 392
+ LI + V+ A+ ++ +M + GV PD T++ +I S
Sbjct: 507 TYTSLIDGHCKEGNVESALSLHD-KMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFK 565
Query: 393 -HHEKAFHVLEEMNKLEHC--KPNVQTFHPLLKS-CFK--TGKTDECLSQLLDDMVNKHH 446
+HE + + L HC K +++ LLK C K + D+ +LD +
Sbjct: 566 LYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLD-----RN 620
Query: 447 LSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAE 506
+LD + Y+++IHG CRA A K+M+ P + ++ + + M A+
Sbjct: 621 WNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEAD 680
Query: 507 KI 508
++
Sbjct: 681 QV 682
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 165/337 (48%), Gaps = 10/337 (2%)
Query: 164 HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELAR 223
++VT NT+ R AG+ + A R + GL+ N T N +++ +CK GK+E AR
Sbjct: 224 NVVTYNTLVAAFFR---AGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDAR 280
Query: 224 SVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSY 282
VF E+ + + P+ ++N + G+CK EA EM G P V++++++I
Sbjct: 281 KVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVM 340
Query: 283 CRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDS 342
C+ N + L+ +M+ +G N VT+T ++ K G ++A+ MK KP
Sbjct: 341 CKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSV 400
Query: 343 RFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLE 402
+N LI R+ EA + EM G+ PD T++T+I+ + + AF + +
Sbjct: 401 VCYNALINGYCMVGRMDEARELLH-EMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQ 459
Query: 403 EMNKLEHCKPNVQTFHPLLKS-CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGL 461
+M + + P+ T+ L++ C + +D + L +M+ K L D TYT +I G
Sbjct: 460 QMLE-KGVLPDAITYSSLIRVLCGEKRLSDAHV--LFKNMI-KLGLQPDEFTYTSLIDGH 515
Query: 462 CRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQ 498
C+ E A L +M+ + P T ++++ + +
Sbjct: 516 CKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSK 552
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 170/367 (46%), Gaps = 5/367 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAV 188
GY S Y ++ L R +S G + T ++R G G ++A+
Sbjct: 151 GYVPSVLAYNAVLLALSDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEAL 210
Query: 189 RTFDELGTFGLEKNTETMNLLLDTLCKEGKVELA-RSVFLELKSCIPPNAHTFNIFIHGW 247
++ G N T N L+ + G+V+ A R V + + + PN TFN ++G
Sbjct: 211 SILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGM 270
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
CK ++++A+ EM G P +SY+T++ YC+ + + EM +G P+V
Sbjct: 271 CKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDV 330
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
VT+T+++ + K+G+ E A+ + +M+ G + + F LI + + +A+ +
Sbjct: 331 VTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVR- 389
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKT 427
M + + P +N +I + G ++A +L EM + + KP+V T+ ++ + K
Sbjct: 390 GMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEM-EAKGLKPDVVTYSTIISAYCKN 448
Query: 428 GKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
T +L M+ K L D TY+ +I LC + A++LFK MI + P
Sbjct: 449 CDTHSAF-ELNQQMLEKGVLP-DAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEF 506
Query: 488 TCRLILD 494
T ++D
Sbjct: 507 TYTSLID 513
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 162/344 (47%), Gaps = 7/344 (2%)
Query: 163 GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELA 222
G++ ++ V+ S A A R FD + + G+ N T N+L+ LC G + A
Sbjct: 151 GYVPSVLAYNAVLLALSDA-SLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 209
Query: 223 RSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQS 281
S+ +++ PN T+N + + + VD A+ + M+ G P ++++++++
Sbjct: 210 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNG 269
Query: 282 YCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPD 341
C+ ++ DEM +G P+ V+Y T++ K+G EA+ + +M G PD
Sbjct: 270 MCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 329
Query: 342 SRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVL 401
F LI+ + +A ++ AV + + +M E G+ + TF +I F G + A +
Sbjct: 330 VVTFTSLIHVMCKAGNLERAVTLVR-QMRERGLQMNEVTFTALIDGFCKKGFLDDALLAV 388
Query: 402 EEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGL 461
M + KP+V ++ L+ G+ DE +LL +M K L D+ TY+ +I
Sbjct: 389 RGMKQCR-IKPSVVCYNALINGYCMVGRMDEA-RELLHEMEAK-GLKPDVVTYSTIISAY 445
Query: 462 CRANKCEWAYLLFKEMIGHDITPRYQT-CRLILDEVKQKHMYDA 504
C+ A+ L ++M+ + P T LI +K + DA
Sbjct: 446 CKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDA 489
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 111/239 (46%), Gaps = 5/239 (2%)
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
G P V++Y+ ++ + + + D M + G PNV TY ++ L G +EA
Sbjct: 151 GYVPSVLAYNAVLLAL-SDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 209
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
+ I M+ G P+ +N L+ RA V A + + M E G+ P+ TFN+M+
Sbjct: 210 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGM-MREGGLKPNLVTFNSMVN 268
Query: 387 MFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHH 446
G E A V +EM + E P+ +++ L+ K G + E LS + +M K
Sbjct: 269 GMCKAGKMEDARKVFDEMVR-EGLAPDGVSYNTLVGGYCKAGCSHEALS-VFAEMTQKGI 326
Query: 447 LSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
+ D+ T+T +IH +C+A E A L ++M + T ++D +K D A
Sbjct: 327 MP-DVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDA 384
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 87/407 (21%), Positives = 142/407 (34%), Gaps = 104/407 (25%)
Query: 41 IESYCSDGARLDHHQVLCVDSPR-----LPDIDVIISKVHV----GSSEDEVFQSLKQDH 91
+ YC G H+ L V + +PD+ S +HV G+ E V +L +
Sbjct: 302 VGGYCKAGC---SHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAV--TLVRQM 356
Query: 92 VCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQ 149
+Q + LI F K AL R C + S Y +++ V +
Sbjct: 357 RERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCR-IKPSVVCYNALINGYCMVGR 415
Query: 150 MDQMRALLEEMS----KGHIVTLNTI--------------------------------AK 173
MD+ R LL EM K +VT +TI +
Sbjct: 416 MDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSS 475
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSC 232
++R G + DA F + GL+ + T L+D CKEG VE A S+ ++ K+
Sbjct: 476 LIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAG 535
Query: 233 IPPNAHTFNIFIHGWCKINR---------------------------------------- 252
+ P+ T+++ I+G K R
Sbjct: 536 VLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLA 595
Query: 253 ----------VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
++EA Q M + YS +I +CR N K +M G
Sbjct: 596 LLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGG 655
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
PN + +++ L ++G EA ++ +++ S D+ LI
Sbjct: 656 FAPNSTSTISLIRGLFENGMVVEADQVIQQLLNYCSLADAEASKALI 702
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 158/304 (51%), Gaps = 6/304 (1%)
Query: 205 TMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
T N+L++ C+ ++ LA ++ ++ K P+ T + ++G+C R+ +A + +M
Sbjct: 84 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 143
Query: 264 KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF 323
G P I+++T+I S+ L+D M +GC PN+VTY V++ L K GD
Sbjct: 144 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 203
Query: 324 EEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNT 383
+ A+ + KM+ + D FN +I +L + V +A+ +++ EM G+ P+ T+++
Sbjct: 204 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFK-EMETKGIRPNVVTYSS 262
Query: 384 MITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVN 443
+I+ +G A +L +M + + PN+ TF+ L+ + K GK E +L DDM+
Sbjct: 263 LISCLCSYGRWSDASQLLSDMIE-KKINPNLVTFNALIDAFVKEGKFVEA-EKLYDDMI- 319
Query: 444 KHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCR-LILDEVKQKHMY 502
K + DI TY +++G C ++ + A +F+ M+ D P T LI K K +
Sbjct: 320 KRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVE 379
Query: 503 DAAE 506
D E
Sbjct: 380 DGTE 383
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 186/386 (48%), Gaps = 8/386 (2%)
Query: 132 HSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRT 190
H Y ++++ + Q+ ALL +M K G+ ++ T++ ++ + + DAV
Sbjct: 80 HGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 139
Query: 191 FDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWC 248
D++ G +T T L+ L K A ++ + + C PN T+ + ++G C
Sbjct: 140 VDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGC-QPNLVTYGVVVNGLC 198
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
K D A + +M+ V+ ++TII S C+ + L EM+ +G PNVV
Sbjct: 199 KRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 258
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
TY++++S L G + +A ++ M P+ FN LI + + EA +Y +
Sbjct: 259 TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYD-D 317
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M + + PD T+N+++ F H +KA + E M + C P+V T++ L+K K+
Sbjct: 318 MIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVS-KDCFPDVVTYNTLIKGFCKSK 376
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ ++ ++L +M ++ L D TYT +I GL C+ A +FK+M+ + P T
Sbjct: 377 RVEDG-TELFREMSHRG-LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMT 434
Query: 489 CRLILDEVKQKHMYDAAEKIEAVMKK 514
++LD + + A ++ M+K
Sbjct: 435 YSILLDGLCNNGKLEKALEVFDYMQK 460
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 164/368 (44%), Gaps = 40/368 (10%)
Query: 183 QWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFN 241
+ +AV D + G + N T ++++ LCK G +LA ++ ++++ I + FN
Sbjct: 167 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFN 226
Query: 242 IFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ 301
I CK VD+A +EM+ G P V++YS++I C +S +LL +M +
Sbjct: 227 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 286
Query: 302 GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM---------------------------- 333
PN+VT+ ++ K G F EA ++ + M
Sbjct: 287 KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKA 346
Query: 334 ----KIVGSK---PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
+ + SK PD +N LI ++ RV++ +++ EM G+ DT T+ T+I
Sbjct: 347 KQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFR-EMSHRGLVGDTVTYTTLIQ 405
Query: 387 MFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHH 446
H G + A V ++M + P++ T+ LL GK ++ L D + K
Sbjct: 406 GLFHDGDCDNAQKVFKQMVS-DGVPPDIMTYSILLDGLCNNGKLEKALEVF--DYMQKSE 462
Query: 447 LSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAE 506
+ LDI YT +I G+C+A K + + LF + + P T ++ + K + A
Sbjct: 463 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 522
Query: 507 KIEAVMKK 514
+ MK+
Sbjct: 523 ALLKKMKE 530
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 148/293 (50%), Gaps = 4/293 (1%)
Query: 131 EHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVR 189
E I+ ++D L K R +D L +EM +KG + T + ++ G+W DA +
Sbjct: 219 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 278
Query: 190 TFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWC 248
++ + N T N L+D KEGK A ++ ++ K I P+ T+N ++G+C
Sbjct: 279 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFC 338
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
+R+D+A+ + M C P V++Y+T+I+ +C+ EL EM +G + V
Sbjct: 339 MHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 398
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
TYTT++ L GD + A ++ ++M G PD ++ L+ L ++++A+ V+
Sbjct: 399 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY- 457
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLL 421
M ++ + D + TMI G + + + ++ L+ KPNV T++ ++
Sbjct: 458 MQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS-LKGVKPNVVTYNTMI 509
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 120/256 (46%), Gaps = 12/256 (4%)
Query: 149 QMDQMRALLEEM-SKG---HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTE 204
++D+ + + E M SK +VT NT+ K F + + ED F E+ GL +T
Sbjct: 342 RLDKAKQMFEFMVSKDCFPDVVTYNTLIK---GFCKSKRVEDGTELFREMSHRGLVGDTV 398
Query: 205 TMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
T L+ L +G + A+ VF ++ S +PP+ T++I + G C ++++A M
Sbjct: 399 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 458
Query: 264 KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF 323
+ + Y+T+I+ C+ ++L + +G PNVVTY T++S L
Sbjct: 459 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 518
Query: 324 EEAIRITEKMKIVGSKPDSRFFNCLIYT-LGRASRVQEAVYVYQVEMPENGVAPDTSTFN 382
+EA + +KMK G P+S +N LI L + A + EM D ST
Sbjct: 519 QEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIR--EMRSCRFVGDASTIG 576
Query: 383 TMITMFSHHGHHEKAF 398
+ M H G +K+F
Sbjct: 577 LVANML-HDGRLDKSF 591
>gi|414872432|tpg|DAA50989.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 604
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 113/479 (23%), Positives = 204/479 (42%), Gaps = 90/479 (18%)
Query: 96 IQPSHYLVNKLIHRFKDDWKSALGI------FRWAGSCPGYEHSSEIYEMMVDILGKVRQ 149
++ H+LV +++ K+ +G+ FRWA YEH + Y ++ L V Q
Sbjct: 53 LRVDHWLVREVM-------KTDVGVNVKMQFFRWAAKRRNYEHDTSTYMALIHCLEVVEQ 105
Query: 150 MDQMRALLEEMSKGHI--VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN 207
+M +++EM + I VT ++ V+R A A+ F ++ T + + N
Sbjct: 106 YGEMWKMIQEMVRNPICVVTPTELSDVVRMLGNAKMVRQAITIFYQIKTRKCQPIAQAYN 165
Query: 208 LLLDTLCKEGKVELARSVFLELKS---CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
++ L EG+ E ++ E+ + C P T++ I +CK+ R D A + EMK
Sbjct: 166 SMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTV-TYSALISAFCKLGRRDSAIQLLNEMK 224
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
G P Y+ +I + + + L +EM+ Q C P+V TYT ++ L K+G +
Sbjct: 225 EIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRID 284
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ------------------ 366
EA +M+ G +PD+ F N +I LG+A R+ +A+ ++Q
Sbjct: 285 EAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTII 344
Query: 367 -----------------VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNK--- 406
M E+G++P + T++ +I F EKA +LEEM++
Sbjct: 345 KALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGF 404
Query: 407 ------------------------------LEHC-KPNVQTFHPLLKSCFKTGKTDECLS 435
E+C + + + ++K K G+ D+ ++
Sbjct: 405 PPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAIN 464
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
+ D+M NK + D+ Y ++ GL R + A + M H P + +IL+
Sbjct: 465 -MFDEM-NKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILN 521
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 177/375 (47%), Gaps = 42/375 (11%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDA 187
G + +++IY M++ + K +L EEM + + T +++R AG+ ++A
Sbjct: 227 GMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEA 286
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS--CIP----------- 234
F E+ G +T MN +++ L K G+++ A +F E+++ CIP
Sbjct: 287 YHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKA 346
Query: 235 ------------------------PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHP 270
P++ T++I I G+CK NR+++A ++EM G P
Sbjct: 347 LFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPP 406
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRIT 330
C +Y ++I + + + EL E++ + Y ++ +L K+G ++AI +
Sbjct: 407 CPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMF 466
Query: 331 EKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSH 390
++M +G PD +N L+ L R + EA+ + M E+G PD +++N ++ +
Sbjct: 467 DEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMR-RMQEHGCIPDINSYNIILNGLAK 525
Query: 391 HGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLD 450
G +A +L M K +P+V +++ +L + G +E S+L+ +M N D
Sbjct: 526 TGGPHRAMEMLSNM-KQSTVRPDVVSYNTVLGALSHAGMFEEA-SKLMKEM-NTLGFEYD 582
Query: 451 ITTYTLVIHGLCRAN 465
+ TY+ ++ + + +
Sbjct: 583 LITYSSILEAIGKVD 597
>gi|297827231|ref|XP_002881498.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327337|gb|EFH57757.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 756
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 193/408 (47%), Gaps = 12/408 (2%)
Query: 100 HYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEE 159
H LV ++H K + AL FRW H + + M+ +LG+V++++ R +L +
Sbjct: 116 HSLVYNVLHGAKK-LEHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVQKLNHARCILLD 174
Query: 160 M-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
M KG + ++ + AG +++V+ F ++ G+E+ ++ N L + + G+
Sbjct: 175 MPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNTLFKVILRRGR 234
Query: 219 VELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
+A+ F ++ S + P HT+N+ + G+ R++ A +MK G P ++Y+T
Sbjct: 235 YMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFDDMKTRGISPDAVTYNT 294
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
II YCR + +L EM+ P+VVTYTT++ ++ +RI E+M+ G
Sbjct: 295 IINGYCRFKKMDEAEKLFVEMKGNNSEPSVVTYTTMIKGYLSVDRVDDGLRIFEEMRSFG 354
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKA 397
+P++ ++ L+ L ++ EA + + M ++ D S F ++ S G A
Sbjct: 355 IEPNATTYSTLLPGLCDVGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAA 414
Query: 398 FHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKH-------HLSLD 450
VL+ M L + + L+++ K + + +LLD ++ K L ++
Sbjct: 415 TEVLKAMATL-NVPAEAGHYGVLIENQCKASAYNRAI-KLLDTLIEKEIILRHQDTLEME 472
Query: 451 ITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQ 498
+ Y +I LC + A +LF++++ + + LI K+
Sbjct: 473 PSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQDALNNLIRGHAKE 520
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 109/495 (22%), Positives = 193/495 (38%), Gaps = 114/495 (23%)
Query: 109 RFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM----SKGH 164
RF DD K+ G + Y +++ + ++MD+ L EM S+
Sbjct: 275 RFFDDMKTR-----------GISPDAVTYNTIINGYCRFKKMDEAEKLFVEMKGNNSEPS 323
Query: 165 IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELAR- 223
+VT T+ K + + +D +R F+E+ +FG+E N T + LL LC GK+ A+
Sbjct: 324 VVTYTTMIK---GYLSVDRVDDGLRIFEEMRSFGIEPNATTYSTLLPGLCDVGKMVEAKN 380
Query: 224 ---------------SVFLELKSC---------------------IPPNAHTFNIFIHGW 247
S+FL+L +P A + + I
Sbjct: 381 ILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQ 440
Query: 248 CKINRVDEA----------------QWTIQEMKGHGCHPCVISY---------------- 275
CK + + A Q T+ EM+ +P +I Y
Sbjct: 441 CKASAYNRAIKLLDTLIEKEIILRHQDTL-EMEPSAYNP-IIEYLCNNGQTAKAEVLFRQ 498
Query: 276 ------------STIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM-SYLAKS-- 320
+ +I+ + ++ N YE+L M +G P Y ++ SY++K
Sbjct: 499 LMKRGVQDQDALNNLIRGHAKEGNPESSYEILKIMSRRGVPREANAYELLIKSYMSKGEP 558
Query: 321 GDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN-GVAPDTS 379
GD + A+ + M G PDS F +I +L RVQ A V + + +N G+ +
Sbjct: 559 GDAKTAL---DSMVEDGHVPDSALFRSVIESLFEDGRVQTASRVMMIMIDKNVGIEDNMD 615
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLD 439
++ GH E+A ++ +N+ H LL + GKT L L
Sbjct: 616 LIAKILEALLMRGHVEEALGRIDLLNQNGHT----ADLDSLLSVLSEKGKTIAALKLL-- 669
Query: 440 DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQK 499
D + LSLD ++Y V+ L A K AY + +++ + +++ ++ + Q+
Sbjct: 670 DFGLERDLSLDFSSYDKVLDALLGAGKTLNAYSVLCKIMEKGSSTDWKSSDELIKSLNQE 729
Query: 500 HMYDAAEKIEAVMKK 514
A+ + ++KK
Sbjct: 730 GNTKQADVLSRMIKK 744
>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
Length = 742
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 129/486 (26%), Positives = 212/486 (43%), Gaps = 53/486 (10%)
Query: 22 RIRFHSSSENCSHIVSSSPIESYCSDGARLDHHQVLCVD------SPRLPDIDVIISKV- 74
R RF EN I + + C+ R+D LC D SP +V+I +
Sbjct: 11 RFRF---PENPPSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLC 67
Query: 75 HVGSSED--EVFQSLKQDHVCNAIQPSHYLVNKLIHR-----FKDDWKSALGIFRWAGSC 127
G +D E+F + + +P+ Y L+ F LG R G
Sbjct: 68 DSGCLDDARELFDKMPE----KGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFS 123
Query: 128 PGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKG----HIVTLNTIAKVMRRFSGAGQ 183
P + +Y ++ K + D L++EM K +VT N + +G+
Sbjct: 124 P----NKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISAL---CSSGK 176
Query: 184 WEDAVRTFDELG---TFGL-EKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAH 238
+A R F ++ GL + N T NL+L CKEG +E AR++F ++K S N
Sbjct: 177 VLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRE 236
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
++NI++ G +I ++ EAQ ++EM G P V SY+ ++ C+ L+ M
Sbjct: 237 SYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLM 296
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRV 358
+ G P+ VTYTT++ +G EA + +M G P++ N L+Y+L + R+
Sbjct: 297 TSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRI 356
Query: 359 QEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFH 418
EA + Q +M E G DT T N +I ++G +KA ++ M H +
Sbjct: 357 SEAEELLQ-KMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGM--WTHGSAAL---- 409
Query: 419 PLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
G L+DD ++ D+ +Y+ +I GLC+A + A F EM+
Sbjct: 410 ---------GNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMM 460
Query: 479 GHDITP 484
G ++ P
Sbjct: 461 GKNLQP 466
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/397 (24%), Positives = 181/397 (45%), Gaps = 29/397 (7%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKG-HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +M+ K +++ RAL E+M +++ + + G+ +A E+
Sbjct: 203 YNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMV 262
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRVD 254
G+E N + N+++D LCK G + AR + L S + P+ T+ +HG+C +V
Sbjct: 263 DMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVS 322
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA ++EM GC P + + ++ S ++ S+ ELL +M +G + VT V+
Sbjct: 323 EANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVI 382
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSK-----------------------PDSRFFNCLIYT 351
L +G ++AI I M GS PD ++ +I
Sbjct: 383 DGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISG 442
Query: 352 LGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCK 411
L +A RV EA + +EM + PD++ ++ I F G AF VL++M K + C
Sbjct: 443 LCKAGRVGEAKKKF-IEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEK-KGCN 500
Query: 412 PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAY 471
+QT++ L+ + E + L+D+M + +S D++ Y V+ LC + + A
Sbjct: 501 KTLQTYNSLIMGLGSKNQIFE-IYGLIDEM-RERGVSPDVSIYNNVLSSLCEGGRVKDAP 558
Query: 472 LLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+ EM+ I+P + +++ + + A ++I
Sbjct: 559 SVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEI 595
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 159/347 (45%), Gaps = 41/347 (11%)
Query: 207 NLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKG 265
N+LL + KEG+V+ + ++ S + P +TFN+ I C +D+A+ +M
Sbjct: 25 NVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDARELFDKMPE 84
Query: 266 HGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEE 325
GC P S+ +++ YCR SK ELL EM+ G PN V Y T++S K G ++
Sbjct: 85 KGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCKEGKTDD 144
Query: 326 AIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY---QVEMPENGVAPDTSTFN 382
A ++ ++M+ G PD FN I L + +V EA ++ Q++ P+ T+N
Sbjct: 145 AEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQPNIITYN 204
Query: 383 TMITMFSHHGHHEKAFHVLEEMNKLEHC-------------------------------- 410
M+ F G E+A + E+M E+
Sbjct: 205 LMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDM 264
Query: 411 --KPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
+PNV +++ ++ K G + +++L ++ + D TYT ++HG C K
Sbjct: 265 GMEPNVYSYNIVMDGLCKNGVLFD--ARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVS 322
Query: 469 WAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEAVMKK 514
A + +EM+ +P TC ++L + K+ + +A E ++ + +K
Sbjct: 323 EANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEK 369
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 131/273 (47%), Gaps = 11/273 (4%)
Query: 209 LLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG 267
++ LCK G+V A+ F+E+ + P++ +++FIH +CK ++ A +++M+ G
Sbjct: 439 IISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKG 498
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
C+ + +Y+++I + ++Y L+DEM+ +G P+V Y V+S L + G ++A
Sbjct: 499 CNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAP 558
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG--VAPDTSTFNTMI 385
+ ++M G P+ F+ LI +A ++++ + G A + TFN ++
Sbjct: 559 SVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHKEALYSLTFNELL 618
Query: 386 TMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKH 445
G KA + E N + L+ K K D+ S +L +++K
Sbjct: 619 V----GGEVVKAKELFETALDRSFDVGNF-LYKDLIDHLCKDEKLDDA-SGILHKLIDKG 672
Query: 446 HLSLDITTYTLVIHGLC-RANKCEWAYLLFKEM 477
+ D ++ VI GL R NK E L K M
Sbjct: 673 YW-FDPASFMPVIDGLGKRGNKHEADELAEKMM 704
>gi|297743431|emb|CBI36298.3| unnamed protein product [Vitis vinifera]
Length = 641
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 171/365 (46%), Gaps = 9/365 (2%)
Query: 122 RWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSG 180
RW C + Y ++D K M+ L E+ KG + T+ T ++ F
Sbjct: 211 RWGQGCI---PNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCK 267
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHT 239
G ++ R E+ + GL N + N ++D K G + A + C P+ T
Sbjct: 268 KGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVT 327
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+N I G C+ +V EA +++ G G P SY+ +I +YC+Q + + L EM
Sbjct: 328 YNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMT 387
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
+G P++VTY ++ L +G+ + A+ I EKM G PD+ +N L+ L + ++
Sbjct: 388 ERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKL- 446
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
A + EM + V PD + T++ F +G+ ++A L E+ + P + ++
Sbjct: 447 PAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEA-RKLFELTIEKGMNPGIVGYNA 505
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
++K K G + ++ + + + K HL+ D TY+ VI G + + + A +F+EM+
Sbjct: 506 MIKGYCKFGMMKDAMACI--NRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVK 563
Query: 480 HDITP 484
P
Sbjct: 564 MKCKP 568
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 113/460 (24%), Positives = 214/460 (46%), Gaps = 37/460 (8%)
Query: 62 PRLPD-IDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGI 120
PR+ + + I+ +H + +E Q+ + A +H +++++ D + L
Sbjct: 25 PRINNLVKDILEVLHTHNQWEENLQTRFSESEVLASDVAHLVLDRI-----RDVELGLKF 79
Query: 121 FRW------AGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAK 173
F W +G G+ +SS ++ +L + R +M +LE M + T ++
Sbjct: 80 FDWVSRGQYSGPINGFAYSS-----LLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSI 134
Query: 174 VMRRFSGAGQWEDAVRTFD-ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC 232
V++ +S +G E A+ + L T+ + N LL+ L K G++E+AR +C
Sbjct: 135 VIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKF-----TC 189
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
I + G CK +++E + I++ G GC P +I Y+T+I YC++ +
Sbjct: 190 I---------MVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMAN 240
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
L E++ +G P V TY +++ K GDF+ R+ +M G + + +N +I
Sbjct: 241 GLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDAR 300
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
+ + +AV + M E G PD T+NT+I+ G +A +LE+ + P
Sbjct: 301 YKHGHIVKAVETIE-GMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALG-KGLMP 358
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
N ++ PL+ + K G D S L +M + H D+ TY ++HGL A + + A
Sbjct: 359 NKFSYTPLIHAYCKQGGYDRA-SNWLIEMTERGH-KPDLVTYGALVHGLVVAGEVDVALT 416
Query: 473 LFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
+ ++M+ + P +++ + +K AA+ + A M
Sbjct: 417 IREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEM 456
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 90/187 (48%), Gaps = 1/187 (0%)
Query: 156 LLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK 215
L+E +GH L T ++ AG+ + A+ +++ G+ + N+L+ LCK
Sbjct: 383 LIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCK 442
Query: 216 EGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVIS 274
+ K+ A+ + E L + P+A + + G+ + +DEA+ + G +P ++
Sbjct: 443 KFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVG 502
Query: 275 YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
Y+ +I+ YC+ ++ M+ + P+ TY+TV+ K D + A ++ +M
Sbjct: 503 YNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMV 562
Query: 335 IVGSKPD 341
+ KP+
Sbjct: 563 KMKCKPN 569
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Query: 209 LLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG 267
L+D + G ++ AR +F L ++ + P +N I G+CK + +A I MK
Sbjct: 471 LVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRH 530
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
P +YST+I Y +Q++ ++ EM C PNV+
Sbjct: 531 LAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVM 571
>gi|110738150|dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]
Length = 642
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/433 (25%), Positives = 188/433 (43%), Gaps = 75/433 (17%)
Query: 117 ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVM 175
A F W+ Y H+ E Y +VD+L + +D++R + E+ K +T++ ++
Sbjct: 117 AWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALI 176
Query: 176 RRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IP 234
+ F G E+ + + ++ G+E T N L++ L V+ A VF ++S I
Sbjct: 177 KSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIK 236
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQS------------- 281
P+ T+N I G+CK + +A +++M+ G I+Y T+IQ+
Sbjct: 237 PDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVAL 296
Query: 282 ----------------------YCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK 319
C++ ++ Y + + M +G PNV YT ++ AK
Sbjct: 297 YQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAK 356
Query: 320 SGDFEEAIRITEKMKIVGSKPD-----------------------------------SRF 344
SG E+AIR+ +M G KPD S F
Sbjct: 357 SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMF 416
Query: 345 FNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
++ LI LG+A RV EA +++ EM E G D+ +N +I F+ H ++A + + M
Sbjct: 417 YSSLIDGLGKAGRVDEAERLFE-EMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRM 475
Query: 405 NKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRA 464
+ E C V T+ LL FK + +E L +L D M++K ++ + + GLC +
Sbjct: 476 EEEEGCDQTVYTYTILLSGMFKEHRNEEAL-KLWDMMIDK-GITPTAACFRALSTGLCLS 533
Query: 465 NKCEWAYLLFKEM 477
K A + E+
Sbjct: 534 GKVARACKILDEL 546
>gi|255660928|gb|ACU25633.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
Length = 481
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 196/389 (50%), Gaps = 14/389 (3%)
Query: 100 HYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEE 159
H LV ++H K+ + AL FRW +EH+ E + +++ILG+ +++ R +L +
Sbjct: 12 HELVYNVLHGAKN-AEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLD 70
Query: 160 M-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
M KG + ++ + G +++V+ F ++ G+E+ ++ + L + + G+
Sbjct: 71 MPKKGLEWDEDMWVLMIDSYGKEGIVQESVKLFQKMEELGVERTIKSYDALFKVISRRGR 130
Query: 219 VELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
+++ F ++ I P HTFN+ I G+ +V+ A +++K P V++Y+T
Sbjct: 131 YMMSKRYFNKMVNEGIEPTRHTFNVLIWGFFLSGKVETANRFFEDLKSREITPDVVTYNT 190
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+I Y R + + EM+ + P VVTYTT++ A ++A+R+ E+MK +G
Sbjct: 191 MINGYTRVKKMEEAEKYFLEMKEKKIDPTVVTYTTLIKGYASIDRVDDALRLVEEMKGLG 250
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP-DTSTFNTMITMFSHHGHHEK 396
KP++ ++ L+ L A ++ EA + + EM + +AP D S F +I+ G+ +
Sbjct: 251 IKPNAITYSTLLPGLCDAEKMSEARSLLK-EMVDKYIAPKDNSIFIRLISSQCKAGNLDA 309
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK-------HHLSL 449
A VL+ M +L + L+++ K GK D+ + +L D ++ K L +
Sbjct: 310 AADVLKAMIRLS-IPTEAGHYGVLIENYCKAGKYDQAV-KLFDKLIEKDIILRPQSTLHM 367
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMI 478
+ + Y +I LC + A L ++++
Sbjct: 368 EPSAYNPLIEYLCNNGQTGKAETLVRQLM 396
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 148/333 (44%), Gaps = 9/333 (2%)
Query: 180 GAGQWEDAVRTFDELGTFGL-EKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNA 237
GA E A++ F + L E N ET +++ L + K+ AR + L++ K + +
Sbjct: 21 GAKNAEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDE 80
Query: 238 HTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQ--YNFSKVYELL 295
+ + I + K V E+ Q+M+ G + SY + + R+ Y SK Y
Sbjct: 81 DMWVLMIDSYGKEGIVQESVKLFQKMEELGVERTIKSYDALFKVISRRGRYMMSKRY--F 138
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
++M +G P T+ ++ SG E A R E +K PD +N +I R
Sbjct: 139 NKMVNEGIEPTRHTFNVLIWGFFLSGKVETANRFFEDLKSREITPDVVTYNTMINGYTRV 198
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQ 415
+++EA Y +EM E + P T+ T+I ++ + A ++EEM L KPN
Sbjct: 199 KKMEEAEK-YFLEMKEKKIDPTVVTYTTLIKGYASIDRVDDALRLVEEMKGL-GIKPNAI 256
Query: 416 TFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFK 475
T+ LL K E S LL +MV+K+ D + + +I C+A + A + K
Sbjct: 257 TYSTLLPGLCDAEKMSEARS-LLKEMVDKYIAPKDNSIFIRLISSQCKAGNLDAAADVLK 315
Query: 476 EMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
MI I ++++ + YD A K+
Sbjct: 316 AMIRLSIPTEAGHYGVLIENYCKAGKYDQAVKL 348
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 4/210 (1%)
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N T+ ++ L ++ A I M G + D + +I + G+ VQE+V ++
Sbjct: 44 NRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVLMIDSYGKEGIVQESVKLF 103
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
Q +M E GV +++ + + S G + + +M E +P TF+ L+ F
Sbjct: 104 Q-KMEELGVERTIKSYDALFKVISRRGRYMMSKRYFNKMVN-EGIEPTRHTFNVLIWGFF 161
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
+GK E ++ +D+ ++ ++ D+ TY +I+G R K E A F EM I P
Sbjct: 162 LSGKV-ETANRFFEDLKSRE-ITPDVVTYNTMINGYTRVKKMEEAEKYFLEMKEKKIDPT 219
Query: 486 YQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
T ++ D A ++ MK L
Sbjct: 220 VVTYTTLIKGYASIDRVDDALRLVEEMKGL 249
Score = 39.3 bits (90), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 62/341 (18%), Positives = 122/341 (35%), Gaps = 85/341 (24%)
Query: 92 VCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEI--YEMMVDILGKVRQ 149
V I+P+ + N LI F K R+ E + ++ Y M++ +V++
Sbjct: 142 VNEGIEPTRHTFNVLIWGFFLSGKVETA-NRFFEDLKSREITPDVVTYNTMINGYTRVKK 200
Query: 150 MDQMRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNL 208
M++ EM + I T+ T +++ ++ + +DA+R +E+ G++ N T +
Sbjct: 201 MEEAEKYFLEMKEKKIDPTVVTYTTLIKGYASIDRVDDALRLVEEMKGLGIKPNAITYST 260
Query: 209 LLDTLCKEGKVELARSVFLEL-------------------------------------KS 231
LL LC K+ ARS+ E+ +
Sbjct: 261 LLPGLCDAEKMSEARSLLKEMVDKYIAPKDNSIFIRLISSQCKAGNLDAAADVLKAMIRL 320
Query: 232 CIPPNAHTFNIFIHGWCKINRVDEA----------------QWTIQEMKGHGCHPCV--- 272
IP A + + I +CK + D+A Q T+ M+ +P +
Sbjct: 321 SIPTEAGHYGVLIENYCKAGKYDQAVKLFDKLIEKDIILRPQSTLH-MEPSAYNPLIEYL 379
Query: 273 ------------------------ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
IS +T+I+ + ++ + +E+L M +
Sbjct: 380 CNNGQTGKAETLVRQLMKLGVQDSISLNTLIRGHSQEGSPDSAFEILKIMLRRKVDSEKS 439
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
Y +++ K + +A + M PDS F ++
Sbjct: 440 AYDSLVQSYLKRNEPADAKAALDXMIENDHLPDSSLFRSVM 480
>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Brachypodium distachyon]
Length = 556
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 164/335 (48%), Gaps = 6/335 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVT-LNTIAKVMRRFSGAGQWEDA 187
G E + Y ++VD L + + ++ A+ +EM + ++ + + V+ + G A
Sbjct: 213 GVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRA 272
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHG 246
FDE G+E N T L++ CK G++E A + +++ + N FN I G
Sbjct: 273 SEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDG 332
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
+C+ V++A M+ G + +Y+T+ CR +LL M +G PN
Sbjct: 333 YCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPN 392
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
V+YTT++S AK GD EA R+ M+ GS+P +N +I + ++EA ++
Sbjct: 393 YVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAER-FK 451
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
EM + G+ PD T+ ++ +G + A + EEM K KPNV + L+ K
Sbjct: 452 KEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEM-KHRGTKPNVVAYTALVSGLAK 510
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGL 461
G+++E QL DDM+ L+ D T Y++++ L
Sbjct: 511 EGRSEEAF-QLYDDML-AAGLTPDDTLYSVLVGSL 543
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 128/267 (47%), Gaps = 5/267 (1%)
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
+ ++ + G+CK VD+A + E+ HG Y++++ SY RQ N V LL EM
Sbjct: 150 SASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEM 209
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRV 358
+ +G P V TYT ++ L+++GD + + ++MK D F++ +I R V
Sbjct: 210 ENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNV 269
Query: 359 QEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFH 418
+ A V+ E +GV P+ T+ +I F G E A +L +M +L N F+
Sbjct: 270 RRASEVFD-ECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADM-QLRGVGHNQIVFN 327
Query: 419 PLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
++ + G ++ L + ++ K + LDI TY + GLCR N+ E A L M
Sbjct: 328 TMIDGYCRHGMVEKALE--IKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMA 385
Query: 479 GHDITPRYQT-CRLILDEVKQKHMYDA 504
+ P Y + LI K+ M +A
Sbjct: 386 EKGVAPNYVSYTTLISIHAKEGDMVEA 412
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 150/348 (43%), Gaps = 40/348 (11%)
Query: 166 VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSV 225
VT + + V+ F +G +DA DEL G+ N N LLD+ ++ + +
Sbjct: 146 VTPLSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGL 205
Query: 226 FLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCR 284
E+++ + P T+ I + G + + + + EMK V YS +I +YCR
Sbjct: 206 LKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCR 265
Query: 285 QYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRF 344
N + E+ DE G PN TY +++ K G E A + M++ G +
Sbjct: 266 GGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIV 325
Query: 345 FNCL----------------------------IYT-------LGRASRVQEAVYVYQVEM 369
FN + IYT L R +R+++A + + M
Sbjct: 326 FNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHI-M 384
Query: 370 PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
E GVAP+ ++ T+I++ + G +A + +M + +P+V T++ ++ K G
Sbjct: 385 AEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEG-KGSRPSVVTYNVMIDGYIKNGS 443
Query: 430 TDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
E ++ + K L DI TY ++HG C K + A LF+EM
Sbjct: 444 IRE--AERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEM 489
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 119/234 (50%), Gaps = 8/234 (3%)
Query: 129 GYEHSSEIYEMMVDIL---GKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQW 184
G H+ ++ M+D G V + +++A++E+M + I T NT+A + R + +
Sbjct: 318 GVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVN---RM 374
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIF 243
EDA + + G+ N + L+ KEG + AR +F +++ P+ T+N+
Sbjct: 375 EDAKKLLHIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVM 434
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
I G+ K + EA+ +EM+ G P + +Y+ ++ +C L +EM+ +G
Sbjct: 435 IDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGT 494
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
PNVV YT ++S LAK G EEA ++ + M G PD ++ L+ +L SR
Sbjct: 495 KPNVVAYTALVSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLVGSLHTDSR 548
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 72/146 (49%), Gaps = 3/146 (2%)
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKT 427
E+P +GV + +N+++ ++ + + +L+EM +P V T+ L+ +
Sbjct: 173 ELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEMEN-RGVEPTVGTYTILVDGLSRA 231
Query: 428 GKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
G + + + D+M K+ ++ D+ Y+ VI+ CR A +F E +GH + P +
Sbjct: 232 GDISK-VEAVYDEMKRKN-VAGDVYFYSAVINAYCRGGNVRRASEVFDECVGHGVEPNER 289
Query: 488 TCRLILDEVKQKHMYDAAEKIEAVMK 513
T +++ + +AAE + A M+
Sbjct: 290 TYGALINGFCKIGQIEAAEMLLADMQ 315
>gi|302792409|ref|XP_002977970.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
gi|300153991|gb|EFJ20627.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
Length = 695
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 160/331 (48%), Gaps = 36/331 (10%)
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQ 257
GL N N L+ LCK G + A S + PN ++NI I G+CK +++A
Sbjct: 5 GLFPNAILYNNLISCLCKAGMLAEAESYLKRMPQHCAPNVVSYNIIIDGYCKARNIEKAL 64
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
++EM+ G P +YS+I+QS+C+ N SK ++ EM A+GC P++V + ++S L
Sbjct: 65 AFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGL 124
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
++ EA + M G KPD +N +I L + ++ EAV++ + M + V+P
Sbjct: 125 WRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLE-RMKQEDVSPT 183
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEM----------------NKLEH------------ 409
T+ T+I ++A+ V E+M NKL+
Sbjct: 184 FVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEASRVYS 243
Query: 410 --CKPNV----QTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCR 463
C+ NV T+ ++ K + ++L+ +M+ K ++ D Y+++I+GLC+
Sbjct: 244 DMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGK-KIAPDFYAYSILINGLCK 302
Query: 464 ANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
A + A +F+EM G I+P T +L+
Sbjct: 303 ARRPGEAKEMFQEMRGRGISPTVVTYNTLLE 333
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 135/302 (44%), Gaps = 41/302 (13%)
Query: 229 LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
L++ + PNA +N I CK + EA+ ++ M H C P V+SY+ II YC+ N
Sbjct: 2 LEAGLFPNAILYNNLISCLCKAGMLAEAESYLKRMPQH-CAPNVVSYNIIIDGYCKARNI 60
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
K L EM+ G PP Y++++ K+G+ +A+ + +M G +PD FN L
Sbjct: 61 EKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVL 120
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
+ L RA ++ EA +++ M G PD T+NTMI ++A +LE M K E
Sbjct: 121 LSGLWRARKIHEARELFR-SMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERM-KQE 178
Query: 409 HCKPNVQTFHPLLK-----------------------SCF------------KTGKTDEC 433
P T+ L+ +C + GK E
Sbjct: 179 DVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEA 238
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEW-AYLLFKEMIGHDITPRYQTCRLI 492
S++ DM K+ D TY+LV+ GL + + A L EM+G I P + ++
Sbjct: 239 -SRVYSDMCRKNVCMTD-NTYSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAPDFYAYSIL 296
Query: 493 LD 494
++
Sbjct: 297 IN 298
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 181/381 (47%), Gaps = 19/381 (4%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y M+ L K +++D+ LLE M + + VT T+ + +F+ + + A F+
Sbjct: 152 YNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFT---RLQQAYEVFE 208
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL---KSCIPPNAHTFNIFIHGWCK 249
++ ++L + L + GK+ A V+ ++ C+ N T+++ + G K
Sbjct: 209 KMAEGPCACTEPAYSVLFNKLQRAGKLVEASRVYSDMCRKNVCMTDN--TYSLVVLGLSK 266
Query: 250 INRVD-EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
++ + EA + EM G P +YS +I C+ + E+ EM+ +G P VV
Sbjct: 267 MDGGNVEAAKLVTEMMGKKIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVV 326
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
TY T++ L + ++A+ +T M G PD+ +N +I EA ++Q +
Sbjct: 327 TYNTLLEGLLSTAKLQDAMELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQ-D 385
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCK---PNVQTFHPLLKSCF 425
M ++G+ +T T+N MI F A+ + + M ++ K PN+ T+ L+ S
Sbjct: 386 MIKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLC 445
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
KT + +E +LL M +K + + + +++ L RA + + A+ L+KEM +
Sbjct: 446 KTDQVEEAF-KLLSAMRDKGFVP-SLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQL 503
Query: 486 YQTCRLILDEVKQKHMYDAAE 506
+ ++LD + ++ D A+
Sbjct: 504 VGSSNILLDGILRRGSVDEAK 524
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 168/399 (42%), Gaps = 46/399 (11%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVM-RRFSGAGQWEDAVRTFDELG 195
Y ++D L K ++ Q + E+M++G V+ + AG+ +A R + ++
Sbjct: 187 YTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEASRVYSDMC 246
Query: 196 TFGLEKNTETMNLLLDTLCK--EGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRV 253
+ T +L++ L K G VE A+ V + I P+ + ++I I+G CK R
Sbjct: 247 RKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAPDFYAYSILINGLCKARRP 306
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
EA+ QEM+G G P V++Y+T+++ EL M QG P+ +Y +
Sbjct: 307 GEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLPDTCSYNLM 366
Query: 314 MSYLAKSGDFEEAIRITEKM--------------KIVG---------------------- 337
+ +GD EA + + M IVG
Sbjct: 367 IRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLFKRMQSGKN 426
Query: 338 ---SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHH 394
P+ + LI +L + +V+EA + M + G P + +++ + G
Sbjct: 427 DKVPAPNMFTYEILISSLCKTDQVEEAFKLLSA-MRDKGFVPSLKIWEVLLSRLARAGRL 485
Query: 395 EKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTY 454
+ AF + +EM+++ +C+ V + + LL + G DE L M + + D TY
Sbjct: 486 DDAFELYKEMSRI-NCQQLVGSSNILLDGILRRGSVDEA-KDFLKQMTDTGIVP-DKFTY 542
Query: 455 TLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
++ GLC K + A L +E++ P Q R +L
Sbjct: 543 DKLVVGLCWQGKADQARKLVEELVRDGKRPENQGLRQLL 581
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 101/215 (46%), Gaps = 9/215 (4%)
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
M G PN + Y ++S L K+G EA ++M P+ +N +I +A
Sbjct: 1 MLEAGLFPNAILYNNLISCLCKAGMLAEAESYLKRMP-QHCAPNVVSYNIIIDGYCKARN 59
Query: 358 VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTF 417
+++A+ + EM E G P +++++ F G+ KA V EM + C+P++ F
Sbjct: 60 IEKAL-AFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEM-PAKGCEPDIVNF 117
Query: 418 HPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
+ LL ++ K E +L M N D+ TY +I GLC+ K + A L + M
Sbjct: 118 NVLLSGLWRARKIHEA-RELFRSM-NSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERM 175
Query: 478 IGHDITPRYQTCRLILDEV----KQKHMYDAAEKI 508
D++P + T ++D + + + Y+ EK+
Sbjct: 176 KQEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKM 210
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 72/342 (21%), Positives = 134/342 (39%), Gaps = 23/342 (6%)
Query: 71 ISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIH-----RFKDDWKSALGIFRWAG 125
+SK+ G+ E L + + I P Y + LI+ R + K R G
Sbjct: 264 LSKMDGGNVEA---AKLVTEMMGKKIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRG 320
Query: 126 SCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWE 185
P + + E +L + D M + +G + + ++R F G
Sbjct: 321 ISPTVVTYNTLLE---GLLSTAKLQDAMELTYFMLDQGRLPDTCSYNLMIRGFCANGDTN 377
Query: 186 DAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC----IP-PNAHTF 240
+A F ++ G+ NT T N ++ K+ A +F ++S +P PN T+
Sbjct: 378 EAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTY 437
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
I I CK ++V+EA + M+ G P + + ++ R +EL EM
Sbjct: 438 EILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSR 497
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL---GRASR 357
C V + ++ + + G +EA ++M G PD ++ L+ L G+A +
Sbjct: 498 INCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQ 557
Query: 358 VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
++ V E+ +G P+ ++ G + A+
Sbjct: 558 ARKLVE----ELVRDGKRPENQGLRQLLGALCAQGDFQGAYE 595
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 109/257 (42%), Gaps = 9/257 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAK--VMRRFSGAGQWEDAVRTFDEL 194
Y +M+ ++ L ++M K IV LNT ++ F W A F +
Sbjct: 363 YNLMIRGFCANGDTNEAYCLFQDMIKDGIV-LNTWTYNFMIVGFIKDEAWSSAWMLFKRM 421
Query: 195 GTFGLEK----NTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCK 249
+ +K N T +L+ +LCK +VE A + ++ P+ + + + +
Sbjct: 422 QSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLAR 481
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
R+D+A +EM C V S + ++ R+ + + + L +M G P+ T
Sbjct: 482 AGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFT 541
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM 369
Y ++ L G ++A ++ E++ G +P+++ L+ L Q A Y + +
Sbjct: 542 YDKLVVGLCWQGKADQARKLVEELVRDGKRPENQGLRQLLGALCAQGDFQGA-YEFYCWL 600
Query: 370 PENGVAPDTSTFNTMIT 386
P GV NT++T
Sbjct: 601 PSVGVEVTLGMHNTLVT 617
>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 819
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/410 (24%), Positives = 198/410 (48%), Gaps = 11/410 (2%)
Query: 110 FKDDWKSALGIFRWAGSCPGYEH--SSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIV 166
F + AL F W Y+ + + +++ +LGK ++ L + + G +
Sbjct: 147 FHKKFDLALCAFDWFMKQKDYQSMLDNSVIAIVISMLGKEGRVSSAANLFNGLQEDGFSL 206
Query: 167 TLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV-ELARSV 225
+ + ++ F+ +G++ +AV F ++ G + T N++L+ K G S+
Sbjct: 207 DVYSYTSLISAFANSGRYREAVNVFKKMEEEGCKPTLITYNVILNVFGKMGTPWNKITSL 266
Query: 226 FLELKS-CIPPNAHTFNIFIHGWCKINRV-DEAQWTIQEMKGHGCHPCVISYSTIIQSYC 283
++KS I P+A+T+N I CK + EA +EMK G ++Y+ ++ Y
Sbjct: 267 VEKMKSDGIAPDAYTYNTLIT-CCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVYG 325
Query: 284 RQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSR 343
+ + + ++L+EM+ G P++VTY +++S A+ G +EA+ + +M G+KPD
Sbjct: 326 KSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVF 385
Query: 344 FFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEE 403
+ L+ RA +V+ A+ +++ EM G P+ TFN I M+ + G + +E
Sbjct: 386 TYTTLLSGFERAGKVESAMNIFE-EMRNAGCKPNICTFNAFIKMYGNRGKFVDMMKIFDE 444
Query: 404 MNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCR 463
+N + P++ T++ LL + F D +S + +M + + T+ +I R
Sbjct: 445 IN-VCGLSPDIVTWNTLL-AVFGQNGMDSEVSGVFKEM-KRAGFVPERETFNTLISAYSR 501
Query: 464 ANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
E A +++ M+ +TP T +L + + M++ +EK+ A M+
Sbjct: 502 CGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEME 551
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 164/377 (43%), Gaps = 18/377 (4%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++ + +++ + EEM K +I T N K+ + G++ D ++ FD
Sbjct: 387 YTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKM---YGNRGKFVDMMKIFD 443
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKIN 251
E+ GL + T N LL + G VF E+K + P TFN I + +
Sbjct: 444 EINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCG 503
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
++A + M G P + +Y+T++ + R + + ++L EM+ C PN +TY
Sbjct: 504 SFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYC 563
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
+++ A + + E++ +P + L+ + + EA + E+ E
Sbjct: 564 SLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFS-ELKE 622
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLL---KSCFKTG 428
G +PD +T N+M++++ KA VL+ M K P++ T++ L+ G
Sbjct: 623 RGFSPDITTLNSMVSIYGRRQMVGKANEVLDYM-KERGFTPSMATYNSLMYMHSRSADFG 681
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
K++E L ++L + DI +Y VI+ CR + A +F EM I P T
Sbjct: 682 KSEEILREILAKGIKP-----DIISYNTVIYAYCRNTRMRDASRIFSEMRDSGIVPDVIT 736
Query: 489 CRLILDEVKQKHMYDAA 505
+ M++ A
Sbjct: 737 YNTFIGSYAADSMFEEA 753
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 151/327 (46%), Gaps = 6/327 (1%)
Query: 119 GIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRR 177
G+F+ G+ E + ++ + +Q + M G L+T V+
Sbjct: 475 GVFKEMKRA-GFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAA 533
Query: 178 FSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPN 236
+ G WE + + E+ + N T LL ++ L S+ E+ S I P
Sbjct: 534 LARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPR 593
Query: 237 AHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLD 296
A + K + + EA+ E+K G P + + ++++ Y R+ K E+LD
Sbjct: 594 AVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVGKANEVLD 653
Query: 297 EMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRAS 356
M+ +G P++ TY ++M ++S DF ++ I ++ G KPD +N +IY R +
Sbjct: 654 YMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNT 713
Query: 357 RVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQT 416
R+++A ++ EM ++G+ PD T+NT I ++ E+A V+ M K C+PN T
Sbjct: 714 RMRDASRIFS-EMRDSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIK-HGCRPNQNT 771
Query: 417 FHPLLKSCFKTGKTDECLSQLLDDMVN 443
++ ++ K + DE ++D+ N
Sbjct: 772 YNSIVDGYCKLNRKDEA-KLFVEDLRN 797
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 58/118 (49%), Gaps = 4/118 (3%)
Query: 153 MRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDT 212
+R +L + K I++ NT+ R + + DA R F E+ G+ + T N + +
Sbjct: 687 LREILAKGIKPDIISYNTVIYAYCRNT---RMRDASRIFSEMRDSGIVPDVITYNTFIGS 743
Query: 213 LCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCH 269
+ E A V +K PN +T+N + G+CK+NR DEA+ +++++ H
Sbjct: 744 YAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDPH 801
>gi|255581238|ref|XP_002531431.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528950|gb|EEF30943.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 737
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 114/409 (27%), Positives = 186/409 (45%), Gaps = 27/409 (6%)
Query: 83 VFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVD 142
+ +SLK VC +Q + D + AL F WAG Y H +Y MM+
Sbjct: 97 LLRSLKPRQVCAVLQ------------LQSDERIALDFFYWAGRQWRYRHDPIVYYMMLQ 144
Query: 143 ILGKVRQMDQMRALLEEMSKGHIVTL-NTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEK 201
+L K + R +L M + I A VM +S AG+ +A++ + G+E
Sbjct: 145 VLSKTKLCQGARRVLRLMVRRGIARRPEAFAHVMVSYSRAGKLRNAMQVLTMMQKAGVEP 204
Query: 202 NTETMNLLLDTLCKEGKVELARSVFLELKSC--IPPNAHTFNIFIHGWCKINRVDEAQWT 259
N N + L K+E A FLE I PN T+N I G+C + +V+ A
Sbjct: 205 NLLICNTAIHVLVMANKLEKALR-FLERMQLVGITPNVVTYNCLIKGYCDLYQVEHAMEL 263
Query: 260 IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM-QAQGCPPNVVTYTTVMSYLA 318
I EM GC P +SY T++ C+ +V L+++M + P+ VTY T++ L+
Sbjct: 264 IAEMPFKGCPPDKVSYYTVMGFLCQDKRIKEVRNLMEKMVKDNKLFPDQVTYNTLVHMLS 323
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL---GRASRVQEAVYVYQVEMPENGVA 375
K G +EA+ + + G + D ++ ++ + GR R +E V EM G +
Sbjct: 324 KHGHADEALEFLRETEERGFQVDKVGYSAIVNSFCMQGRMDRAKEIVN----EMITKGCS 379
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS 435
PD T+ ++ G E+A +L++M K CKPN ++ LL + G + E
Sbjct: 380 PDVVTYTAVVNGLCKVGKVEEAKKMLQQMYK-HGCKPNTVSYTALLNGLCQHGNSLEARE 438
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
+ + + + + TY++V+HGL R K A + +EM+ P
Sbjct: 439 MM--NTSEEDWWTPNAITYSVVMHGLRREGKLSEACDVVREMLTKGFFP 485
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 175/370 (47%), Gaps = 21/370 (5%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHI-----VTLNTIAKVMRRFSGAGQWEDAVRTF 191
Y ++ L + +++ ++R L+E+M K + VT NT+ ++ S G ++A+
Sbjct: 279 YYTVMGFLCQDKRIKEVRNLMEKMVKDNKLFPDQVTYNTLVHML---SKHGHADEALEFL 335
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCK 249
E G + + + ++++ C +G+++ A+ + E+ K C P+ T+ ++G CK
Sbjct: 336 RETEERGFQVDKVGYSAIVNSFCMQGRMDRAKEIVNEMITKGC-SPDVVTYTAVVNGLCK 394
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
+ +V+EA+ +Q+M HGC P +SY+ ++ C+ N + E+++ + PN +T
Sbjct: 395 VGKVEEAKKMLQQMYKHGCKPNTVSYTALLNGLCQHGNSLEAREMMNTSEEDWWTPNAIT 454
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM 369
Y+ VM L + G EA + +M G P N LI +L ++ EA + E
Sbjct: 455 YSVVMHGLRREGKLSEACDVVREMLTKGFFPTPVEINLLIKSLCLEQKMNEA-KKFMEEC 513
Query: 370 PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
G A + F T+I F + + A +L++M L + P+ TF ++ + K G+
Sbjct: 514 LNRGCAVNAVNFTTVIHGFCQSDNIDTALSLLDDM-YLNNKHPDAVTFTAIIDALGKKGR 572
Query: 430 TDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTC 489
+E + + K L TY VIH C+ + E L +M+ C
Sbjct: 573 IEEATVYTMKML--KKGLDPTPVTYRAVIHQYCKMGRVEELIKLLGKMLSRS------KC 624
Query: 490 RLILDEVKQK 499
R ++V +K
Sbjct: 625 RTAYNQVIEK 634
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 179/383 (46%), Gaps = 45/383 (11%)
Query: 151 DQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD---ELGTFGLEKNTETMN 207
D AL +EM + L + R FS + + D +L G+ N T+N
Sbjct: 70 DDAIALFQEMIRSR--PLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 208 LLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
++++ C+ K A SV + +K P+ TFN I+G C +V +A + M +
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVEN 187
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
GC P +++Y++I+ CR + S +++L +M+ + +V TY+T++ L + G + A
Sbjct: 188 GCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247
Query: 327 IRITEKMKIVGSK-----------------------------------PDSRFFNCLIYT 351
I + ++M+ G K P+ FN L+
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307
Query: 352 LGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCK 411
+ ++QEA +Y+ EM G++P+ T+NT++ + +A ++L+ M + C
Sbjct: 308 FVKEGKLQEANELYK-EMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR-NKCS 365
Query: 412 PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAY 471
P++ TF L+K + D+ + + ++K L + TY++++ G C++ K + A
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRN--ISKRGLVANAVTYSILVQGFCQSGKIKLAE 423
Query: 472 LLFKEMIGHDITPRYQTCRLILD 494
LF+EM+ H + P T ++LD
Sbjct: 424 ELFQEMVSHGVLPDVMTYGILLD 446
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/438 (24%), Positives = 200/438 (45%), Gaps = 24/438 (5%)
Query: 62 PRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIF 121
P L D S + + V KQ + N I + Y +N +I+ F K+ +
Sbjct: 86 PGLVDFSRFFSAIARTKQFNLVLDFCKQLEL-NGIAHNIYTLNIMINCFCRCCKTCFA-Y 143
Query: 122 RWAGSCP--GYEHSSEIYEMMVDIL---GKVRQ----MDQMRALLEEMSKGHIVTLNTIA 172
G GYE + + +++ L GKV + +D+M +E + +VT N+I
Sbjct: 144 SVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRM---VENGCQPDMVTYNSIV 200
Query: 173 KVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS- 231
+ R D +R +E ++ + T + ++D+LC++G ++ A S+F E+++
Sbjct: 201 NGICRSGDTSLAFDMLRKMEERN---VKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK 257
Query: 232 CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKV 291
I + T+N + G CK + ++ +++M P VI+++ ++ + ++ +
Sbjct: 258 GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 317
Query: 292 YELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYT 351
EL EM +G PN++TY T+M EA + + M PD F LI
Sbjct: 318 NELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG 377
Query: 352 LGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH-C 410
RV + + V++ + + G+ + T++ ++ F G + A + +EM + H
Sbjct: 378 YCMVKRVDDGMKVFR-NISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM--VSHGV 434
Query: 411 KPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWA 470
P+V T+ LL GK ++ L ++ +D+ K + L I YT +I G+C+ K E A
Sbjct: 435 LPDVMTYGILLDGLCDNGKLEKAL-EIFEDL-QKSKMDLGIVMYTTIIEGMCKGGKVEDA 492
Query: 471 YLLFKEMIGHDITPRYQT 488
+ LF + + P T
Sbjct: 493 WNLFCSLPCKGVKPNVMT 510
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 159/328 (48%), Gaps = 8/328 (2%)
Query: 151 DQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLL 210
D +R + E K + T +TI + R G + A+ F E+ T G++ + T N L+
Sbjct: 214 DMLRKMEERNVKADVFTYSTIIDSLCR---DGCIDAAISLFKEMETKGIKSSVVTYNSLV 270
Query: 211 DTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCH 269
LCK GK + ++ S I PN TFN+ + + K ++ EA +EM G
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS 330
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI 329
P +I+Y+T++ YC Q S+ +LD M C P++VT+T+++ ++ +++
Sbjct: 331 PNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKV 390
Query: 330 TEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFS 389
+ G ++ ++ L+ ++ +++ A ++Q EM +GV PD T+ ++
Sbjct: 391 FRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ-EMVSHGVLPDVMTYGILLDGLC 449
Query: 390 HHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSL 449
+G EKA + E++ K + + +++ K GK ++ + + +
Sbjct: 450 DNGKLEKALEIFEDLQK-SKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCS--LPCKGVKP 506
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEM 477
++ TYT++I GLC+ A +L ++M
Sbjct: 507 NVMTYTVMISGLCKKGSLSEANILLRKM 534
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 141/329 (42%), Gaps = 45/329 (13%)
Query: 116 SALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIV----TLNTI 171
+A+ +F+ + G + S Y +V L K + + LL++M IV T N +
Sbjct: 246 AAISLFKEMET-KGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304
Query: 172 AKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LEL 229
V F G+ ++A + E+ T G+ N T N L+D C + ++ A ++ +
Sbjct: 305 LDV---FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR 361
Query: 230 KSCIP----------------------------------PNAHTFNIFIHGWCKINRVDE 255
C P NA T++I + G+C+ ++
Sbjct: 362 NKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKL 421
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
A+ QEM HG P V++Y ++ C K E+ +++Q +V YTT++
Sbjct: 422 AEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIE 481
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
+ K G E+A + + G KP+ + +I L + + EA + + +M E+G A
Sbjct: 482 GMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLR-KMEEDGNA 540
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
P+ T+NT+I G + ++EEM
Sbjct: 541 PNDCTYNTLIRAHLRDGDLTASAKLIEEM 569
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 100/198 (50%), Gaps = 2/198 (1%)
Query: 147 VRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTET 205
V+++D + +SK G + T + +++ F +G+ + A F E+ + G+ + T
Sbjct: 381 VKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMT 440
Query: 206 MNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
+LLD LC GK+E A +F +L KS + + I G CK +V++A +
Sbjct: 441 YGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLP 500
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
G P V++Y+ +I C++ + S+ LL +M+ G PN TY T++ + GD
Sbjct: 501 CKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLT 560
Query: 325 EAIRITEKMKIVGSKPDS 342
+ ++ E+MK G D+
Sbjct: 561 ASAKLIEEMKSCGFSADA 578
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 108/223 (48%), Gaps = 8/223 (3%)
Query: 106 LIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGH 164
++ R D K +FR S G ++ Y ++V + ++ L +EM S G
Sbjct: 380 MVKRVDDGMK----VFRNI-SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGV 434
Query: 165 IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARS 224
+ + T ++ G+ E A+ F++L ++ +++ +CK GKVE A +
Sbjct: 435 LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWN 494
Query: 225 VFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYC 283
+F L + PN T+ + I G CK + EA +++M+ G P +Y+T+I+++
Sbjct: 495 LFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHL 554
Query: 284 RQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
R + + +L++EM++ G + + V+ L SG+ +++
Sbjct: 555 RDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL-SGELDKS 596
>gi|115455091|ref|NP_001051146.1| Os03g0728200 [Oryza sativa Japonica Group]
gi|50428716|gb|AAT77067.1| putative PPR repeat containing protein [Oryza sativa Japonica
Group]
gi|108710874|gb|ABF98669.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|113549617|dbj|BAF13060.1| Os03g0728200 [Oryza sativa Japonica Group]
Length = 601
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 151/298 (50%), Gaps = 10/298 (3%)
Query: 215 KEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVIS 274
K G V +A + EL+ +P + + ++GWC++ ++DEA+ + MK P V+
Sbjct: 173 KTGHVAVAEQLVEELQPRLPLSLRHYTALLYGWCRMGKLDEAKHVLARMKAAEVAPDVVV 232
Query: 275 YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
++T++ + F +EL EM+ +GCPPN V+YTT+M L G +EA+R+ +M+
Sbjct: 233 FNTLLAGFVADGRFEDAFELAREMERRGCPPNAVSYTTLMQGLGARGRVDEAMRVFVEMR 292
Query: 335 IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHH 394
G PDS + L+ +A R+ + Y + M G+ D + + F H
Sbjct: 293 RKGCAPDSVTYGTLVTAFCKAGRISQG-YEFLDVMAREGLRVDAGVY---LGFFVAHEKK 348
Query: 395 EKAFHVLEEMNKLEHCK--PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
E+ LE M ++ C+ P++ ++ +++ K G+T + ++ L ++M + LS +
Sbjct: 349 EQLEECLELMERMRECRCPPDLSIYNVVIRLACKLGETKQAVA-LWNEM-ETNELSPGVD 406
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMIGHD--ITPRYQTCRLILDEVKQKHMYDAAEKI 508
T+ +++ GL A FK+M+G + P+Y + +L+ + + + A+ +
Sbjct: 407 TFAIMVTGLVGQGVLVEACGYFKDMVGRGLFVAPQYGVLKDLLNSLVRDQKLELAKDV 464
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/377 (19%), Positives = 147/377 (38%), Gaps = 49/377 (12%)
Query: 146 KVRQMDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEK 201
++ ++D+ + +L M + V NT+ + F G++EDA E+ G
Sbjct: 207 RMGKLDEAKHVLARMKAAEVAPDVVVFNTL---LAGFVADGRFEDAFELAREMERRGCPP 263
Query: 202 NTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVDEAQWT 259
N + L+ L G+V+ A VF+E+ K C P++ T+ + +CK R+ +
Sbjct: 264 NAVSYTTLMQGLGARGRVDEAMRVFVEMRRKGC-APDSVTYGTLVTAFCKAGRISQGYEF 322
Query: 260 IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK 319
+ M G Y ++ ++ + EL++ M+ CPP++ Y V+ K
Sbjct: 323 LDVMAREGLRVDAGVYLGFFVAHEKKEQLEECLELMERMRECRCPPDLSIYNVVIRLACK 382
Query: 320 SGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTS 379
G+ ++A+ + EM N ++P
Sbjct: 383 LGETKQAVALWN------------------------------------EMETNELSPGVD 406
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEM-NKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLL 438
TF M+T G +A ++M + P LL S + K + L++ +
Sbjct: 407 TFAIMVTGLVGQGVLVEACGYFKDMVGRGLFVAPQYGVLKDLLNSLVRDQKLE--LAKDV 464
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQ 498
+ L+ +T+ IH L + A + +M+ + P+ T ++ +K+
Sbjct: 465 WGCIMTKGCELNFGAWTIWIHALYAKKHVKEACMYCLDMLDAGLMPQPDTFAKLMKGLKK 524
Query: 499 KHMYDAAEKIEAVMKKL 515
+ A +I ++K+
Sbjct: 525 LYNRQIAAEITEKVRKM 541
>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 198/410 (48%), Gaps = 11/410 (2%)
Query: 110 FKDDWKSALGIFRWAGSCPGYEH--SSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIV 166
F + AL F W Y+ + + +++ +LGK ++ + + + G +
Sbjct: 147 FHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSL 206
Query: 167 TLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV-ELARSV 225
+ + ++ F+ +G++ +AV F ++ G + T N++L+ K G S+
Sbjct: 207 DVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSL 266
Query: 226 FLELKS-CIPPNAHTFNIFIHGWCKINRV-DEAQWTIQEMKGHGCHPCVISYSTIIQSYC 283
++KS I P+A+T+N I CK + EA +EMK G ++Y+ ++ Y
Sbjct: 267 VEKMKSDGIAPDAYTYNTLIT-CCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYG 325
Query: 284 RQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSR 343
+ + + ++L+EM G P++VTY +++S A+ G +EA+ + +M G+KPD
Sbjct: 326 KSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVF 385
Query: 344 FFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEE 403
+ L+ RA +V+ A+ +++ EM G P+ TFN I M+ + G + + +E
Sbjct: 386 TYTTLLSGFERAGKVESAMSIFE-EMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDE 444
Query: 404 MNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCR 463
+N + P++ T++ LL + F D +S + +M + + T+ +I R
Sbjct: 445 IN-VCGLSPDIVTWNTLL-AVFGQNGMDSEVSGVFKEM-KRAGFVPERETFNTLISAYSR 501
Query: 464 ANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
E A +++ M+ +TP T +L + + M++ +EK+ A M+
Sbjct: 502 CGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEME 551
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/426 (22%), Positives = 180/426 (42%), Gaps = 19/426 (4%)
Query: 89 QDHVCNAIQPSHYLVNKLIHRFKDDWKSALGI-FRWAGSCPGYEHSSEIYEMMVDILGKV 147
+ V N PS N LI + D + + + G + Y ++ +
Sbjct: 338 NEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERA 397
Query: 148 RQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNT 203
+++ ++ EEM K +I T N K+ + G++ + ++ FDE+ GL +
Sbjct: 398 GKVESAMSIFEEMRNAGCKPNICTFNAFIKM---YGNRGKFTEMMKIFDEINVCGLSPDI 454
Query: 204 ETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQE 262
T N LL + G VF E+K + P TFN I + + ++A +
Sbjct: 455 VTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRR 514
Query: 263 MKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGD 322
M G P + +Y+T++ + R + + ++L EM+ C PN +TY +++ A +
Sbjct: 515 MLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKE 574
Query: 323 FEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFN 382
+ E++ +P + L+ + + EA + E+ E G +PD +T N
Sbjct: 575 IGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFS-ELKERGFSPDITTLN 633
Query: 383 TMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLL---KSCFKTGKTDECLSQLLD 439
+M++++ KA VL+ M K P++ T++ L+ GK++E L ++L
Sbjct: 634 SMVSIYGRRQMVAKANGVLDYM-KERGFTPSMATYNSLMYMHSRSADFGKSEEILREILA 692
Query: 440 DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQK 499
+ DI +Y VI+ CR + A +F EM I P T +
Sbjct: 693 KGIKP-----DIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAAD 747
Query: 500 HMYDAA 505
M++ A
Sbjct: 748 SMFEEA 753
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 165/366 (45%), Gaps = 9/366 (2%)
Query: 82 EVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSA--LGIFRWAGSCPGYEHSSEIYEM 139
E+ + + +VC + P N L+ F + + G+F+ G+ E +
Sbjct: 437 EMMKIFDEINVC-GLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRA-GFVPERETFNT 494
Query: 140 MVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
++ + +Q + M G L+T V+ + G WE + + E+
Sbjct: 495 LISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGR 554
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQ 257
+ N T LL ++ L S+ E+ S I P A + K + + EA+
Sbjct: 555 CKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAE 614
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
E+K G P + + ++++ Y R+ +K +LD M+ +G P++ TY ++M
Sbjct: 615 RAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMH 674
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
++S DF ++ I ++ G KPD +N +IY R +R+++A ++ EM +G+ PD
Sbjct: 675 SRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFS-EMRNSGIVPD 733
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
T+NT I ++ E+A V+ M K C+PN T++ ++ K + DE
Sbjct: 734 VITYNTFIGSYAADSMFEEAIGVVRYMIK-HGCRPNQNTYNSIVDGYCKLNRKDEA-KLF 791
Query: 438 LDDMVN 443
++D+ N
Sbjct: 792 VEDLRN 797
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 58/118 (49%), Gaps = 4/118 (3%)
Query: 153 MRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDT 212
+R +L + K I++ NT+ R + + DA R F E+ G+ + T N + +
Sbjct: 687 LREILAKGIKPDIISYNTVIYAYCRNT---RMRDASRIFSEMRNSGIVPDVITYNTFIGS 743
Query: 213 LCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCH 269
+ E A V +K PN +T+N + G+CK+NR DEA+ +++++ H
Sbjct: 744 YAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDPH 801
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 170/346 (49%), Gaps = 40/346 (11%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
+Y ++D + KV+ +++ L EM SKG + T ++ F G+ +DA F+++
Sbjct: 214 MYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKM 273
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL------------------------- 229
+ N T N+L+D CKE +++ A++V +
Sbjct: 274 IFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEV 333
Query: 230 -----------KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTI 278
+ + PN H+++I IHG+CKI +VDEA +EM + P V++Y+++
Sbjct: 334 NKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSL 393
Query: 279 IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
I C+ S +L+DEM +G P + +TY +++ L K+ ++AI + KMK G
Sbjct: 394 IDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGI 453
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
+PD + L+ L + R+++A V++ ++ G D + + MI F HG +++
Sbjct: 454 QPDICTYTTLVDGLCKNGRLEDARIVFE-DLLVKGYILDVNIYTAMIQGFCSHGLFDESL 512
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK 444
+L +M + C PN T+ ++ S F + D+ +LL +M+ +
Sbjct: 513 DLLSKMEE-NGCIPNAVTYEIIICSLFDKDENDKA-EKLLREMITR 556
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 185/385 (48%), Gaps = 12/385 (3%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLE----EMSKGHIVTLNTIAKVMRRFSGAGQW 184
G+ + Y +++ L KV Q LL ++ + ++V NTI M + +
Sbjct: 172 GFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEA 231
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIF 243
D + E+ + G+ + T N L+ C GK++ A +F ++ I PN +TFNI
Sbjct: 232 FDL---YSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNIL 288
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
+ G+CK R+ EA+ + M G P V +Y++++ YC +K + + + +G
Sbjct: 289 VDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGV 348
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
PN+ +Y+ ++ K +EA+ + ++M PD +N LI L + ++ A+
Sbjct: 349 NPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALK 408
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
+ EM + GV D T+N+++ + +KA +L +M K E +P++ T+ L+
Sbjct: 409 LVD-EMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKM-KDEGIQPDICTYTTLVDG 466
Query: 424 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
K G+ ++ + +D++ K ++ LD+ YT +I G C + + L +M +
Sbjct: 467 LCKNGRLEDA-RIVFEDLLVKGYI-LDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCI 524
Query: 484 PRYQTCRLILDEVKQKHMYDAAEKI 508
P T +I+ + K D AEK+
Sbjct: 525 PNAVTYEIIICSLFDKDENDKAEKL 549
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 102/411 (24%), Positives = 185/411 (45%), Gaps = 22/411 (5%)
Query: 104 NKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKG 163
N+L+H+ K+ S + GS H S + + RQM+ G
Sbjct: 60 NRLLHQ-KNPKPSIFQFGKILGSLVKSNHYSTVVSLH-------RQME---------FNG 102
Query: 164 HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELAR 223
L ++ ++ FS GQ + ++ G E N T+ L+ LC +G++ A
Sbjct: 103 ITSDLVILSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQAL 162
Query: 224 SVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSY 282
++ + N ++ I+G CK+ + A ++ + G P V+ Y+TII S
Sbjct: 163 QFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSM 222
Query: 283 CRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDS 342
C+ ++ ++L EM ++G P+VVTY ++S G ++A + KM P+
Sbjct: 223 CKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNV 282
Query: 343 RFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLE 402
FN L+ + R++EA V + M + G+ PD T+N+++ + KA H+
Sbjct: 283 YTFNILVDGFCKERRLKEAKNVLAMMMKQ-GIKPDVFTYNSLMDRYCLVKEVNKAKHIFN 341
Query: 403 EMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC 462
+++ PN+ ++ ++ K K DE ++ L +M + +++ D+ TY +I GLC
Sbjct: 342 TISQ-RGVNPNIHSYSIMIHGFCKIKKVDEAMN-LFKEM-HCNNIIPDVVTYNSLIDGLC 398
Query: 463 RANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
+ K +A L EM + T ILD + + H D A + MK
Sbjct: 399 KLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMK 449
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 113/245 (46%), Gaps = 4/245 (1%)
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI 329
P + + I+ S + ++S V L +M+ G ++V + +++ ++ G + +
Sbjct: 70 PSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFSV 129
Query: 330 TEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFS 389
K+ +G +P+ LI L ++ +A+ + ++ G + ++ T+I
Sbjct: 130 LAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHD-KVVALGFHLNKVSYGTLINGLC 188
Query: 390 HHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSL 449
G A +L ++ + +PNV ++ ++ S K +E L +MV+K +S
Sbjct: 189 KVGQTSAALQLLRRVDG-KLVQPNVVMYNTIIDSMCKVKLVNEAF-DLYSEMVSKG-ISP 245
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIE 509
D+ TY +I G C K + A LF +MI +I P T +++D ++ A+ +
Sbjct: 246 DVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVL 305
Query: 510 AVMKK 514
A+M K
Sbjct: 306 AMMMK 310
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 105/228 (46%), Gaps = 17/228 (7%)
Query: 83 VFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWK--SALGIFRWAGSCPGYEHSSEIYEMM 140
+F ++ Q + P+ + + +IH F K A+ +F+ C Y +
Sbjct: 339 IFNTISQ----RGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEM-HCNNIIPDVVTYNSL 393
Query: 141 VDILGKVRQMDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQWEDAVRTFDELGT 196
+D L K+ ++ L++EM + +T N+I + + Q + A+ ++
Sbjct: 394 IDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCK---NHQVDKAIALLTKMKD 450
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKINRVD 254
G++ + T L+D LCK G++E AR VF L +K I + + + I G+C D
Sbjct: 451 EGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYIL-DVNIYTAMIQGFCSHGLFD 509
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
E+ + +M+ +GC P ++Y II S + K +LL EM +G
Sbjct: 510 ESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRG 557
>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
Length = 382
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 142/294 (48%), Gaps = 8/294 (2%)
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEA 256
G N T N L+D LCK+ +++ AR+V E K P+ T+N + ++ RVDEA
Sbjct: 77 GCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLGRVDEA 136
Query: 257 QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSY 316
T +M G P ++S++ II CR + E+ +EM + PN+VTY+ V+
Sbjct: 137 LATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDG 196
Query: 317 LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
L KS +EA ++ ++M G +PD + L+ A R+ A+ + + M G P
Sbjct: 197 LCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLR-RMVSQGCIP 255
Query: 377 DTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQ 436
D T+ +I G + A + E+ C PNV T+ L+ + + DE +
Sbjct: 256 DVVTYTVVIDKLCKVGRVDDAHEIFRELVA-NKCSPNVVTYSALIGGYCRASRVDEG-GK 313
Query: 437 LLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCR 490
++ +M + + + TY +I GL ++ E AY +F+EM P +T R
Sbjct: 314 VMREMACRPN----VVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYR 363
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 151/295 (51%), Gaps = 9/295 (3%)
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVF---LELKSCIPPNAHTFNIFIHGWCKINRVD 254
G++ N T +++L LC+ G+V A F LEL P+ ++ I+G CK+ RVD
Sbjct: 5 GMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHA-QPDVVSYTTLINGLCKLGRVD 63
Query: 255 EAQWTIQEM-KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
A ++M GC P +Y+ ++ C+Q ++ E + + P+VVTY T+
Sbjct: 64 AAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTL 123
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
M+ L + G +EA+ +M G P FN +I L RA R+ +A+ V+ EM +
Sbjct: 124 MAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFN-EMIDRD 182
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
P+ T++ +I ++A +L+ M E C+P++ + PL+ G+ D
Sbjct: 183 FHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVS-EGCRPDLVAYTPLVLGFSAAGRLDSA 241
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
L LL MV++ + D+ TYT+VI LC+ + + A+ +F+E++ + +P T
Sbjct: 242 LG-LLRRMVSQGCIP-DVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVT 294
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 160/327 (48%), Gaps = 15/327 (4%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS 161
L+N L + D +A +FR + G ++ Y +VD L K ++D RA++ E
Sbjct: 52 LINGLCKLGRVD--AAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEAR 109
Query: 162 K----GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEG 217
K +VT NT+ + + G+ ++A+ TF ++ G + N ++ LC+
Sbjct: 110 KRDFAPDVVTYNTLMAALFQL---GRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRAR 166
Query: 218 KVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYS 276
++ A VF E+ PN T+++ I G CK +++DEAQ + M GC P +++Y+
Sbjct: 167 RLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYT 226
Query: 277 TIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIV 336
++ + LL M +QGC P+VVTYT V+ L K G ++A I ++
Sbjct: 227 PLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVAN 286
Query: 337 GSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEK 396
P+ ++ LI RASRV E V M E P+ T+NTMI S +E+
Sbjct: 287 KCSPNVVTYSALIGGYCRASRVDEGGKV----MREMACRPNVVTYNTMIWGLSMVDRNEE 342
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKS 423
A+ + EM++ P+ +T+ L ++
Sbjct: 343 AYGMFREMSECGFV-PDARTYRGLKRA 368
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 100/212 (47%), Gaps = 4/212 (1%)
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR-ITEKMKIVGSKPDSRFFNCLIYTLGRAS 356
M +G N T + ++ L + G +A+ +++ ++PD + LI L +
Sbjct: 1 MDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLG 60
Query: 357 RVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQT 416
RV A +++ + G P+ T+N ++ + A V+ E K + P+V T
Sbjct: 61 RVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDF-APDVVT 119
Query: 417 FHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKE 476
++ L+ + F+ G+ DE L+ M + ++ + ++ +I GLCRA + A +F E
Sbjct: 120 YNTLMAALFQLGRVDEALATFTQ-MTEEGYVPT-LVSFNAIITGLCRARRLADALEVFNE 177
Query: 477 MIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
MI D P T +++D + + D A+++
Sbjct: 178 MIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQL 209
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 163/322 (50%), Gaps = 5/322 (1%)
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSC 232
++R F A + +A F L + G + + N L+ +L + G VELA ++ E+ +S
Sbjct: 161 LIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSG 220
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
+ N +T NI ++ CK ++++ + E++ G +P +++Y+T+I +Y Q + +
Sbjct: 221 VGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAF 280
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
EL+ M ++G P V TY TV++ L K G +E A + +M G PDS + L+
Sbjct: 281 ELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEA 340
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
+ E ++ +M V PD F++M+++F+ G+ +KA + +
Sbjct: 341 CKKGDAVETENIFS-DMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPD 399
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
NV + L++ + G E ++ L ++M+ + ++D+ TY ++HGLC+ A
Sbjct: 400 NV-IYTILIQGYCRKGMISEAMN-LRNEML-QQGCAMDVVTYNTILHGLCKRKMLGEADK 456
Query: 473 LFKEMIGHDITPRYQTCRLILD 494
LF EM + P T +++D
Sbjct: 457 LFNEMTERGLFPDSYTLTILID 478
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 176/379 (46%), Gaps = 6/379 (1%)
Query: 136 IYEMMVDILGKVRQM-DQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
++++++ + R++ + A SKG+ V+++ ++ G E A R + E+
Sbjct: 157 VFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEI 216
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRV 253
G+ N T+N++++ LCK+GK+E + E++ + P+ T+N I + +
Sbjct: 217 SRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLM 276
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
+EA + M G P V +Y+T+I C+ + + E+ EM G P+ TY ++
Sbjct: 277 EEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL 336
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
+ K GD E I M+ PD F+ ++ R+ + +A+ +Y + E G
Sbjct: 337 LMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKAL-MYFNSVKEAG 395
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
+ PD + +I + G +A ++ EM + + C +V T++ +L K E
Sbjct: 396 LIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQ-QGCAMDVVTYNTILHGLCKRKMLGEA 454
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
+L ++M + L D T T++I G C+ + A LFK+M I T +L
Sbjct: 455 -DKLFNEMTERG-LFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLL 512
Query: 494 DEVKQKHMYDAAEKIEAVM 512
D + D A++I A M
Sbjct: 513 DGFGKVGDIDTAKEIWADM 531
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 113/511 (22%), Positives = 203/511 (39%), Gaps = 80/511 (15%)
Query: 69 VIISKVHVGSSED--EVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGS 126
+I S V +G E ++Q + + V + + +VN L KD +G F
Sbjct: 196 LIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALC---KDGKMEKVGTFLSEVQ 252
Query: 127 CPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWE 185
G Y ++ M++ L+ M SKG + T V+ G++E
Sbjct: 253 EKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYE 312
Query: 186 DAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS--CIP--------- 234
A F E+ GL ++ T LL CK+G ++F +++S +P
Sbjct: 313 RAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMM 372
Query: 235 -------------------------PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCH 269
P+ + I I G+C+ + EA EM GC
Sbjct: 373 SLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCA 432
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI 329
V++Y+TI+ C++ + +L +EM +G P+ T T ++ K G+ + A+ +
Sbjct: 433 MDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMEL 492
Query: 330 TEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFS 389
+KMK K D +N L+ G+ + A ++ +M + P +F+ ++
Sbjct: 493 FKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIW-ADMVSKEILPTPISFSILVNALC 551
Query: 390 HHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE----------------C 433
GH +AF V +EM + KP V + ++K ++G + C
Sbjct: 552 SKGHLSEAFRVWDEMIS-KSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDC 610
Query: 434 LS--QLLDDMVNKHHLSL-----------------DITTYTLVIHGLCRANKCEWAYLLF 474
+S L+ V + ++S D+ TY ++HG CR N+ + A +
Sbjct: 611 ISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVL 670
Query: 475 KEMIGHDITP-RYQTCRLILDEVKQKHMYDA 504
++MI + P R LI V Q ++ +A
Sbjct: 671 RKMIERGVNPDRSTYTSLINGFVSQDNLTEA 701
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 134/272 (49%), Gaps = 5/272 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ L K + + + L EM+ +G T+ ++ G ++A+ F ++
Sbjct: 438 YNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMK 497
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVD 254
++ + T N LLD K G ++ A+ ++ ++ S I P +F+I ++ C +
Sbjct: 498 EKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLS 557
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA EM P V+ +++I+ YCR N S L++M ++G P+ ++Y T++
Sbjct: 558 EAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLI 617
Query: 315 SYLAKSGDFEEAIRITEKM--KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN 372
K + +A + +KM K G PD +N +++ R ++++EA V + +M E
Sbjct: 618 YGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLR-KMIER 676
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
GV PD ST+ ++I F + +AF +EM
Sbjct: 677 GVNPDRSTYTSLINGFVSQDNLTEAFRFHDEM 708
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 160/351 (45%), Gaps = 6/351 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVM-RRFSGAGQWEDAVRTFDELG 195
+ M+ + + +D+ + + ++ N I ++ + + G +A+ +E+
Sbjct: 368 FSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEML 427
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
G + T N +L LCK + A +F E+ + + P+++T I I G CK+ +
Sbjct: 428 QQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQ 487
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
A ++MK V++Y+T++ + + + E+ +M ++ P ++++ ++
Sbjct: 488 NAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILV 547
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
+ L G EA R+ ++M KP N +I R+ + ++ +M G
Sbjct: 548 NALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDG-EIFLEKMISEGF 606
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMN-KLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
PD ++NT+I F + KAF ++++M K P+V T++ +L + + E
Sbjct: 607 VPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEA 666
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
+L M+ + ++ D +TYT +I+G + A+ EM+ +P
Sbjct: 667 -EAVLRKMIERG-VNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSP 715
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 102/213 (47%), Gaps = 6/213 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++D GKV +D + + +M SK + T + + ++ G +A R +DE+
Sbjct: 508 YNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMI 567
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLE--LKSCIPPNAHTFNIFIHGWCKINRV 253
+ ++ N ++ C+ G +FLE + P+ ++N I+G+ K +
Sbjct: 568 SKSIKPTVMICNSMIKGYCRSGNASDGE-IFLEKMISEGFVPDCISYNTLIYGFVKEENM 626
Query: 254 DEAQWTIQEM--KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
+A +++M K G P V +Y++I+ +CR+ + +L +M +G P+ TYT
Sbjct: 627 SKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYT 686
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRF 344
++++ + EA R ++M G PD +F
Sbjct: 687 SLINGFVSQDNLTEAFRFHDEMLQRGFSPDDKF 719
>gi|125544731|gb|EAY90870.1| hypothetical protein OsI_12477 [Oryza sativa Indica Group]
Length = 601
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 151/298 (50%), Gaps = 10/298 (3%)
Query: 215 KEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVIS 274
K G V +A + EL+ +P + + ++GWC++ ++DEA+ + MK P V+
Sbjct: 173 KTGHVAVAEQLVEELQPRLPLSLRHYTALLYGWCRMGKLDEAKHVLARMKAAEVAPDVVV 232
Query: 275 YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
++T++ + F +EL EM+ +GCPPN V+YTT+M L G +EA+R+ +M+
Sbjct: 233 FNTLLAGFVADGRFEDAFELAREMERRGCPPNAVSYTTLMQGLGARGRVDEAMRVFVEMR 292
Query: 335 IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHH 394
G PDS + L+ +A R+ + Y + M G+ D + + F H
Sbjct: 293 RKGCAPDSVTYGTLVTAFCKAGRISQG-YEFLDVMAREGLRVDAGVY---LGFFVAHEKK 348
Query: 395 EKAFHVLEEMNKLEHCK--PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
E+ LE M ++ C+ P++ ++ +++ K G+T + ++ L ++M + LS +
Sbjct: 349 EQLEECLELMERMRECRCPPDLSIYNVVIRLACKLGETKQAVA-LWNEM-ETNELSPGVD 406
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMIGHD--ITPRYQTCRLILDEVKQKHMYDAAEKI 508
T+ +++ GL A FK+M+G + P+Y + +L+ + + + A+ +
Sbjct: 407 TFAIMVTGLVGQGVLVEACGYFKDMVGRGLFVAPQYGVLKDLLNSLVRDQKLELAKDV 464
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/377 (19%), Positives = 148/377 (39%), Gaps = 49/377 (12%)
Query: 146 KVRQMDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEK 201
++ ++D+ + +L M + V NT+ + F G++EDA E+ G
Sbjct: 207 RMGKLDEAKHVLARMKAAEVAPDVVVFNTL---LAGFVADGRFEDAFELAREMERRGCPP 263
Query: 202 NTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVDEAQWT 259
N + L+ L G+V+ A VF+E+ K C P++ T+ + +CK R+ +
Sbjct: 264 NAVSYTTLMQGLGARGRVDEAMRVFVEMRRKGCA-PDSVTYGTLVTAFCKAGRISQGYEF 322
Query: 260 IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK 319
+ M G Y ++ ++ + EL++ M+ CPP++ Y V+ K
Sbjct: 323 LDVMAREGLRVDAGVYLGFFVAHEKKEQLEECLELMERMRECRCPPDLSIYNVVIRLACK 382
Query: 320 SGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTS 379
G+ ++A+ + EM N ++P
Sbjct: 383 LGETKQAVALWN------------------------------------EMETNELSPGVD 406
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEM-NKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLL 438
TF M+T G +A ++M + P LL S + K + L++ +
Sbjct: 407 TFAIMVTGLVGQGVLVEACGYFKDMVGRGLFVAPQYGVLKDLLNSLVRDQKLE--LAKDV 464
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQ 498
+ L++ +T+ IH L + A + +M+ + P+ T ++ +K+
Sbjct: 465 WGCIMTKGCELNVGAWTIWIHALYAKKHVKEACMYCLDMLDAGLMPQPDTFAKLMKGLKK 524
Query: 499 KHMYDAAEKIEAVMKKL 515
+ A +I ++K+
Sbjct: 525 LYNRQIAAEITEKVRKM 541
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 186/388 (47%), Gaps = 6/388 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G + +S Y +++ L ++D+ +LEEM KG T+ T + E+A
Sbjct: 305 GCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEA 364
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHG 246
+ + G N +T L+ L + GK+E+A ++ + LK + PN T+N I+
Sbjct: 365 IELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINE 424
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C R A M+GHG +Y+ II+ C + K L ++M G P
Sbjct: 425 LCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPT 484
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
VVTY T+++ G+ A R+ + MK G +PD +N L+ + +++ A + +Q
Sbjct: 485 VVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQ 544
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
EM E G+ P+ ++ T+I S G + A +LE M ++ C PNV++++ ++ K
Sbjct: 545 -EMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEM-GCNPNVESYNAVINGLSK 602
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
+ E ++ D M + L ++ TYT +I GLCR + ++A+ +F +M P
Sbjct: 603 ENRFSEA-EKICDKMAEQGLLP-NVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNL 660
Query: 487 QTCRLILDEVKQKHMYDAAEKIEAVMKK 514
T ++ + Q+ D AE + M++
Sbjct: 661 YTYSSLIYGLCQEGKADEAEILLKEMER 688
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 167/356 (46%), Gaps = 12/356 (3%)
Query: 144 LGKVRQMDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGL 199
L K ++ R L ++M I +T NT+ ++ S G+ +A ++ + L
Sbjct: 215 LAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINIL---SKKGKVREAELILSQIFQYDL 271
Query: 200 EKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQW 258
+ T L+ C+ ++LA VF + K PN+ T++ I+G C RVDEA
Sbjct: 272 SPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALD 331
Query: 259 TIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLA 318
++EM G P V +Y+ I + C + + EL+ M+ +GC PNV TYT ++S L+
Sbjct: 332 MLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLS 391
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDT 378
+ G E AI + KM G P++ +N LI L R A+ ++ M +G +T
Sbjct: 392 RLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHW-MEGHGSLANT 450
Query: 379 STFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLL 438
T+N +I G EKA + E+M K+ P V T++ L+ G + L
Sbjct: 451 QTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPL-PTVVTYNTLINGYLTKGNVNNAARLL- 508
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
D++ ++ D TY ++ G + K E A F+EM+ + P + ++D
Sbjct: 509 -DLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLID 563
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 159/386 (41%), Gaps = 72/386 (18%)
Query: 163 GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVE-L 221
G + T ++++ G E A+ F+++ G T N L++ +G V
Sbjct: 445 GSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNA 504
Query: 222 ARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQS 281
AR + L ++ P+ T+N + G+ K +++ A + QEM G +P +SY+T+I
Sbjct: 505 ARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDG 564
Query: 282 YCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPD 341
+ + LL+ M+ GC PNV +Y V++ L+K F EA +I +KM G P+
Sbjct: 565 HSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPN 624
Query: 342 SRFFNCLIYTLGRASRVQEA---------------VYVYQV------------------- 367
+ LI L R R Q A +Y Y
Sbjct: 625 VITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLK 684
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKT 427
EM G+APD TF ++I F G + AF +L M + CKPN +T+ LLK
Sbjct: 685 EMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDV-GCKPNYRTYSVLLK----- 738
Query: 428 GKTDECLSQLLDDMVNKHHLSL-----------------------------DITTYTLVI 458
G ECL LL++ V H ++ + TY+ ++
Sbjct: 739 GLQKECL--LLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLV 796
Query: 459 HGLCRANKCEWAYLLFKEMIGHDITP 484
GLCR + A L K+M P
Sbjct: 797 SGLCRKGRFYEAEQLVKDMKERGFCP 822
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 94/404 (23%), Positives = 169/404 (41%), Gaps = 64/404 (15%)
Query: 170 TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--L 227
T +++ FS G+ E A F E+ GL N + L+D K+GKV++A S+ +
Sbjct: 522 TYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERM 581
Query: 228 ELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQ------- 280
E C PN ++N I+G K NR EA+ +M G P VI+Y+T+I
Sbjct: 582 EEMGC-NPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGR 640
Query: 281 ----------------------------SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
C++ + LL EM+ +G P+ VT+T+
Sbjct: 641 TQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTS 700
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRV--------QEAVYV 364
++ G + A + +M VG KP+ R ++ L+ L + + EAVY
Sbjct: 701 LIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYS 760
Query: 365 YQ---------------VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH 409
+ M E G P T++T+++ G +A ++++M +
Sbjct: 761 FSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGF 820
Query: 410 CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEW 469
C P+ + ++ LL + K + D L + + L ++ Y +I LC+A + E
Sbjct: 821 C-PDREIYYSLLIAHCKNLEVDHALK--IFHSIEAKGFQLHLSIYRALICALCKAGQVEE 877
Query: 470 AYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
A LF M+ + +++D + ++ D K+ +M+
Sbjct: 878 AQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIME 921
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 112/426 (26%), Positives = 180/426 (42%), Gaps = 74/426 (17%)
Query: 69 VIISKVH-VGSSE-DEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGS 126
I+S+V GSSE ++ LK HV + +H+ D +S + F W
Sbjct: 95 AILSRVQWKGSSELKQLSPQLKAHHVAEIVA---------VHK---DTESVIQFFYWISK 142
Query: 127 CPGYEHSSEIYEMMVDILGKVRQM---DQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQ 183
P Y+H+ + M++ L + R D +R L+ + + + +A + SG G
Sbjct: 143 RPFYKHNMNCFISMLNRLVRDRVFAPADHIRILMIKACRNE-EEIRRVADFLNEISGMG- 200
Query: 184 WEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNI 242
FG + + N LL L K VE AR+++ + L S I P+ TFN
Sbjct: 201 -------------FGF--SLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNT 245
Query: 243 FIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
I+ K +V EA+ +I S QY+ S
Sbjct: 246 LINILSKKGKVREAE--------------------LILSQIFQYDLS------------- 272
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
P+V TYT+++ ++ + + A + ++M G P+S ++ LI L RV EA+
Sbjct: 273 --PDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEAL 330
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLK 422
+ + EM E G+ P T+ IT H E+A ++ M K C+PNVQT+ L+
Sbjct: 331 DMLE-EMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKK-RGCRPNVQTYTALIS 388
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
+ GK + + L M+ K L + TY +I+ LC + A +F M GH
Sbjct: 389 GLSRLGKLEVAIG-LYHKML-KEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGS 446
Query: 483 TPRYQT 488
QT
Sbjct: 447 LANTQT 452
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 113/250 (45%), Gaps = 6/250 (2%)
Query: 260 IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK 319
+ E+ G G + S +T++ + L +M G P+++T+ T+++ L+K
Sbjct: 193 LNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSK 252
Query: 320 SGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTS 379
G EA I ++ PD + LI R + A V+ M + G P++
Sbjct: 253 KGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFD-RMVKEGCDPNSV 311
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFH-PLLKSCFKTGKTDECLSQLL 438
T++T+I + G ++A +LEEM + + +P V T+ P+ C + + + L
Sbjct: 312 TYSTLINGLCNEGRVDEALDMLEEMIE-KGIEPTVYTYTLPITALCAIEHEEE---AIEL 367
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQ 498
+ K ++ TYT +I GL R K E A L+ +M+ + P T +++E+
Sbjct: 368 VARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCV 427
Query: 499 KHMYDAAEKI 508
+ A KI
Sbjct: 428 GGRFSTALKI 437
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 83/183 (45%), Gaps = 2/183 (1%)
Query: 156 LLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLC 214
LL MS+ G TL+T + ++ G++ +A + ++ G + E LL C
Sbjct: 776 LLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHC 835
Query: 215 KEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI 273
K +V+ A +F +++ + + I CK +V+EAQ M + I
Sbjct: 836 KNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEI 895
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
++ ++ ++ +LL M+++ PN+ TY + L++ G E+ + +K+
Sbjct: 896 VWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKL 955
Query: 334 KIV 336
K++
Sbjct: 956 KVL 958
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 33/180 (18%), Positives = 71/180 (39%), Gaps = 1/180 (0%)
Query: 183 QWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFN 241
+E + G E +T + L+ LC++G+ A + ++K P+ +
Sbjct: 769 NFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYY 828
Query: 242 IFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ 301
+ CK VD A ++ G + Y +I + C+ + L D M +
Sbjct: 829 SLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEK 888
Query: 302 GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
+ + +T ++ L K G+ + +++ M+ P+ + + L L R + E+
Sbjct: 889 EWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIES 948
>gi|222625312|gb|EEE59444.1| hypothetical protein OsJ_11623 [Oryza sativa Japonica Group]
Length = 589
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 151/299 (50%), Gaps = 10/299 (3%)
Query: 214 CKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI 273
K G V +A + EL+ +P + + ++GWC++ ++DEA+ + MK P V+
Sbjct: 160 AKTGHVAVAEQLVEELQPRLPLSLRHYTALLYGWCRMGKLDEAKHVLARMKAAEVAPDVV 219
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
++T++ + F +EL EM+ +GCPPN V+YTT+M L G +EA+R+ +M
Sbjct: 220 VFNTLLAGFVADGRFEDAFELAREMERRGCPPNAVSYTTLMQGLGARGRVDEAMRVFVEM 279
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
+ G PDS + L+ +A R+ + Y + M G+ D + + F H
Sbjct: 280 RRKGCAPDSVTYGTLVTAFCKAGRISQG-YEFLDVMAREGLRVDAGVY---LGFFVAHEK 335
Query: 394 HEKAFHVLEEMNKLEHCK--PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDI 451
E+ LE M ++ C+ P++ ++ +++ K G+T + ++ L ++M + LS +
Sbjct: 336 KEQLEECLELMERMRECRCPPDLSIYNVVIRLACKLGETKQAVA-LWNEM-ETNELSPGV 393
Query: 452 TTYTLVIHGLCRANKCEWAYLLFKEMIGHD--ITPRYQTCRLILDEVKQKHMYDAAEKI 508
T+ +++ GL A FK+M+G + P+Y + +L+ + + + A+ +
Sbjct: 394 DTFAIMVTGLVGQGVLVEACGYFKDMVGRGLFVAPQYGVLKDLLNSLVRDQKLELAKDV 452
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/377 (19%), Positives = 147/377 (38%), Gaps = 49/377 (12%)
Query: 146 KVRQMDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEK 201
++ ++D+ + +L M + V NT+ + F G++EDA E+ G
Sbjct: 195 RMGKLDEAKHVLARMKAAEVAPDVVVFNTL---LAGFVADGRFEDAFELAREMERRGCPP 251
Query: 202 NTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVDEAQWT 259
N + L+ L G+V+ A VF+E+ K C P++ T+ + +CK R+ +
Sbjct: 252 NAVSYTTLMQGLGARGRVDEAMRVFVEMRRKGCA-PDSVTYGTLVTAFCKAGRISQGYEF 310
Query: 260 IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK 319
+ M G Y ++ ++ + EL++ M+ CPP++ Y V+ K
Sbjct: 311 LDVMAREGLRVDAGVYLGFFVAHEKKEQLEECLELMERMRECRCPPDLSIYNVVIRLACK 370
Query: 320 SGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTS 379
G+ ++A+ + EM N ++P
Sbjct: 371 LGETKQAVALWN------------------------------------EMETNELSPGVD 394
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEM-NKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLL 438
TF M+T G +A ++M + P LL S + K + L++ +
Sbjct: 395 TFAIMVTGLVGQGVLVEACGYFKDMVGRGLFVAPQYGVLKDLLNSLVRDQKLE--LAKDV 452
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQ 498
+ L+ +T+ IH L + A + +M+ + P+ T ++ +K+
Sbjct: 453 WGCIMTKGCELNFGAWTIWIHALYAKKHVKEACMYCLDMLDAGLMPQPDTFAKLMKGLKK 512
Query: 499 KHMYDAAEKIEAVMKKL 515
+ A +I ++K+
Sbjct: 513 LYNRQIAAEITEKVRKM 529
>gi|168059281|ref|XP_001781632.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666946|gb|EDQ53588.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/429 (25%), Positives = 201/429 (46%), Gaps = 15/429 (3%)
Query: 88 KQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRW-AGSCPGYEHSSEIYEMMVDILGK 146
K H ++ YL+ +L +R +W+ AL + W S++ +M+ LG+
Sbjct: 155 KWSHQLVGLEDFPYLLRELGNR--GEWERALQGYEWMVQQVHLRSEWSKLASIMISTLGR 212
Query: 147 VRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTET 205
+ +++ + K G + + ++ + +G+ +A++ F + G + N T
Sbjct: 213 LGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLIT 272
Query: 206 MNLLLDTLCKEGKVEL--ARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQE 262
N ++D C +G V+L A +F E+ K + P+ TFN I + +++Q E
Sbjct: 273 YNTIIDA-CGKGGVDLKQALDIFDEMQKEGVEPDRITFNSLIAVCSRGGLWEDSQRVFAE 331
Query: 263 MKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGD 322
M+ G + +++T+I + C+ ++ M+ + PNVVTY+T++ K G
Sbjct: 332 MQRRGIEQDIFTFNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGC 391
Query: 323 FEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFN 382
FEEAI + MK G +PD +N LI + R +A+ + +M G+ D T+N
Sbjct: 392 FEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALIACK-DMERVGLKADVVTYN 450
Query: 383 TMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMV 442
+I + G ++ A + ++M K E PNV T+ L+ S K G + +S + +
Sbjct: 451 ALIDAYGKQGKYKDAACLFDKM-KGEGLVPNVLTYSALIDSYSKAGMHQD-VSNVFTEF- 507
Query: 443 NKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMY 502
+ L D+ Y+ +I C+ E A +L +EM I P T ++D + Y
Sbjct: 508 KRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGR---Y 564
Query: 503 DAAEKIEAV 511
A+K+EAV
Sbjct: 565 GQADKLEAV 573
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 174/352 (49%), Gaps = 8/352 (2%)
Query: 155 ALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL--GTFGLEKNTETMNLLLDT 212
ALL E +V L ++R G+WE A++ ++ + + ++ ++++ T
Sbjct: 150 ALLLEKWSHQLVGLEDFPYLLRELGNRGEWERALQGYEWMVQQVHLRSEWSKLASIMIST 209
Query: 213 LCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPC 271
L + GKVE+A VF K+ N + ++ + + + R EA Q MK GC P
Sbjct: 210 LGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPN 269
Query: 272 VISYSTIIQSYCR-QYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRIT 330
+I+Y+TII + + + + ++ DEMQ +G P+ +T+ ++++ ++ G +E++ R+
Sbjct: 270 LITYNTIIDACGKGGVDLKQALDIFDEMQKEGVEPDRITFNSLIAVCSRGGLWEDSQRVF 329
Query: 331 EKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSH 390
+M+ G + D FN LI + + +++ A + +N ++P+ T++TMI +
Sbjct: 330 AEMQRRGIEQDIFTFNTLIDAVCKGGQMELAASIMTTMRGKN-ISPNVVTYSTMIDGYGK 388
Query: 391 HGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLD 450
G E+A + +M K +P+ +++ L+ K G+ D+ L D + + L D
Sbjct: 389 LGCFEEAISLYHDM-KESGVRPDRVSYNTLIDIYAKLGRFDDALIACKD--MERVGLKAD 445
Query: 451 ITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMY 502
+ TY +I + K + A LF +M G + P T ++D + M+
Sbjct: 446 VVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMH 497
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 132/284 (46%), Gaps = 25/284 (8%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y M+D GK+ ++ +L +M + + V+ NT+ + ++ G+++DA+
Sbjct: 379 YSTMIDGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDI---YAKLGRFDDALIACK 435
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKIN 251
++ GL+ + T N L+D K+GK + A +F ++K + PN T++ I + K
Sbjct: 436 DMERVGLKADVVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAG 495
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
+ E K G P V+ YS++I S C+ LL EM G PN+VTY
Sbjct: 496 MHQDVSNVFTEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYN 555
Query: 312 TVMSYLAKSG--DFEEAI---------RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
+++ + G D EA+ +I E+ V KP N +T V
Sbjct: 556 SLIDAYGRYGQADKLEAVKANMPNSVQKIGERSMEVVRKPPPSQQNASDHT-----GVLA 610
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
AV V+ EM + G+ P+ TF+ ++ S ++A +LE+M
Sbjct: 611 AVSVFH-EMQQFGLKPNVVTFSAILNACSRCASLQEASVLLEQM 653
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 132/317 (41%), Gaps = 64/317 (20%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++DI K+ + D ++M K +VT N + + + G+++DA FD
Sbjct: 414 YNTLIDIYAKLGRFDDALIACKDMERVGLKADVVTYNAL---IDAYGKQGKYKDAACLFD 470
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKIN 251
++ GL N T + L+D+ K G + +VF E K + + P+ ++ I CK
Sbjct: 471 KMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNVFTEFKRAGLKPDVVLYSSLIDSCCKCG 530
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCR--------------------------- 284
V++A +QEM G P +++Y+++I +Y R
Sbjct: 531 LVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRYGQADKLEAVKANMPNSVQKIGERSME 590
Query: 285 --------QYNFS------KVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRIT 330
Q N S + EMQ G PNVVT++ +++ ++ +EA +
Sbjct: 591 VVRKPPPSQQNASDHTGVLAAVSVFHEMQQFGLKPNVVTFSAILNACSRCASLQEASVLL 650
Query: 331 EKMKIVGSKPDSRFFNCLIYTL--GRASRVQEAVYVYQV----EMPENGVAPDTSTFNTM 384
E+M RFF+ +Y + G ++E V+V E+ A + +N +
Sbjct: 651 EQM---------RFFDGWVYGIAHGLLMGLREQVWVEAQRLFDEISRMDYATGAAFYNAL 701
Query: 385 ITMFSHHGHHEKAFHVL 401
+ H G + A V+
Sbjct: 702 TDVLWHFGQRQGAQEVV 718
>gi|147819071|emb|CAN69810.1| hypothetical protein VITISV_043106 [Vitis vinifera]
Length = 847
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 184/394 (46%), Gaps = 25/394 (6%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS 161
L +++ F+ + AL +FRWA S PG+ S ++ +++IL Q + MR+ M
Sbjct: 389 LFVRVLSSFRTSPRMALRLFRWAESQPGFRRSEFVFCAILEILA---QNNLMRSAYWVME 445
Query: 162 KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVEL 221
+ ++ I V+ G E +V+ D LL+ K+ VE
Sbjct: 446 RVINANMHRIVDVL--IGGCVSSEVSVKILD---------------LLIWVYSKKSMVEQ 488
Query: 222 ARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQ 280
SVF ++ KS + P+ N + + + +A + M G P +++Y+T++
Sbjct: 489 CLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLD 548
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
SYC+ + +LL EMQ +GC PN VTY +++ L+K G+FE+A + +M G K
Sbjct: 549 SYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKV 608
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
+ +N LIY + EA+ + Q EM G +P +T+N+ I G A
Sbjct: 609 SAYTYNPLIYGYFNKGLLAEALSL-QEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQ 667
Query: 401 LEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHG 460
L +M + P+V +++ L+ + G + LL D + +L I TY ++ G
Sbjct: 668 LSDMLA-NNLLPDVVSYNTLIYGYCRLGNLMKAF--LLFDELRSIYLFPTIVTYNTLLDG 724
Query: 461 LCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
LCR + E A L EMI I P T ++++
Sbjct: 725 LCRQGELEVAQQLKVEMINEGIAPDIVTYTILVN 758
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 160/341 (46%), Gaps = 20/341 (5%)
Query: 107 IHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK---- 162
I R KD A+ ++R G G + + Y ++D K ++ Q LL EM +
Sbjct: 514 ILRDKDLMSKAVEVYRTMGEF-GIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCA 572
Query: 163 GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELA 222
+ VT N + + S G++E A E+ GL+ + T N L+ +G + A
Sbjct: 573 PNDVTYNVL---INGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEA 629
Query: 223 RSVFLE--LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQ 280
S+ E LK P T+N FI+G CK+ R+ +A + +M + P V+SY+T+I
Sbjct: 630 LSLQEEMVLKGA-SPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIY 688
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
YCR N K + L DE+++ P +VTY T++ L + G+ E A ++ +M G P
Sbjct: 689 GYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAP 748
Query: 341 DSRFFNCLIY---TLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKA 397
D + L+ +G S QE + EM G+ D+ + T I G +A
Sbjct: 749 DIVTYTILVNGSCKMGSLSMAQE----FFDEMLHEGLELDSYAYATRIVGELKLGDTSRA 804
Query: 398 FHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLL 438
F + EEM + P++ ++ ++ K G +E S+LL
Sbjct: 805 FSLQEEMLA-KGFPPDLIIYNVVVDGLCKLGNLEEA-SELL 843
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 149/290 (51%), Gaps = 16/290 (5%)
Query: 189 RTFDELGTFGLEKNTE---------TMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAH 238
R DE F L+K E T ++L+ LCKEG++++A +F E++ + PN
Sbjct: 272 RNLDE--GFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGI 329
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
TF I G + R+D A T +M G P ++ Y+T++ C+ + +K +L+DEM
Sbjct: 330 TFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEM 389
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRV 358
+ G P+ +TYTT++ K GD E A+ I + M G D+ F LI R RV
Sbjct: 390 KMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRV 449
Query: 359 QEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFH 418
++A + EM E G+ PD +T+ +I + G+ + F +L+EM H KP V T++
Sbjct: 450 RDAERTLR-EMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGH-KPGVITYN 507
Query: 419 PLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
L+ K G+ + LL+ M+N DIT Y +++ G C+ K E
Sbjct: 508 VLMNGLCKQGQMKNA-NMLLEAMLNLGVTPDDIT-YNILLEGHCKNGKAE 555
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 154/322 (47%), Gaps = 5/322 (1%)
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SC 232
++ +F G DA F+E+ GL T + N L++ LCK ++ + ++ +
Sbjct: 229 LINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENR 288
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
I P+ T+++ IHG CK R+D A+ EM+ G P I+++ +I R
Sbjct: 289 IYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAM 348
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
+M G P++V Y T+++ L K GD +A ++ ++MK+VG KPD + LI
Sbjct: 349 NTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGY 408
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
+ ++ A+ + + M E GV D F +I+ F G A L EM + KP
Sbjct: 409 CKEGDLESAMEIRK-GMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVE-AGMKP 466
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
+ T+ ++ K G L + +N H + TY ++++GLC+ + + A +
Sbjct: 467 DDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPG--VITYNVLMNGLCKQGQMKNANM 524
Query: 473 LFKEMIGHDITPRYQTCRLILD 494
L + M+ +TP T ++L+
Sbjct: 525 LLEAMLNLGVTPDDITYNILLE 546
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 171/392 (43%), Gaps = 25/392 (6%)
Query: 123 WAGSCPGYEHSSEIYEMMVDILGKVRQMDQ-----MRALLEEMSKGHIVT-----LNTIA 172
W S P + H+S+ Y M + L QM Q +R L+ K + L+T
Sbjct: 90 WLSSIPTFRHTSQSYCAMANFL-SAHQMFQECQSIIRFLVSRKGKDSAASVFAAILDTAG 148
Query: 173 ---------KVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELAR 223
+M + +G DA++ F + + LLD +
Sbjct: 149 TRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIW 208
Query: 224 SVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSY 282
+ + E L+ PP +NI I+ +CK + +A+ E++ G P +S++T+I
Sbjct: 209 TFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGL 268
Query: 283 CRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDS 342
C+ N + + L M+ P+V TY+ ++ L K G + A ++ ++M+ G +P+
Sbjct: 269 CKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNG 328
Query: 343 RFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLE 402
F LI R+ R+ A+ Y +M GV PD +NT++ G KA +++
Sbjct: 329 ITFTALIDGQYRSRRMDSAMNTYH-QMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVD 387
Query: 403 EMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC 462
EM K+ KP+ T+ L+ K G + + + +N+ + LD +T +I G C
Sbjct: 388 EM-KMVGMKPDKITYTTLIDGYCKEGDLESAME--IRKGMNEEGVVLDNVAFTALISGFC 444
Query: 463 RANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
R + A +EM+ + P T +++D
Sbjct: 445 RDGRVRDAERTLREMVEAGMKPDDATYTMVID 476
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 99/207 (47%), Gaps = 9/207 (4%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQWEDAVRTF 191
+Y +++ L KV +++ R L++EM K +T T+ + + G E A+
Sbjct: 365 MYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTL---IDGYCKEGDLESAMEIR 421
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKI 250
+ G+ + L+ C++G+V A E+ ++ + P+ T+ + I G+CK
Sbjct: 422 KGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKK 481
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
V ++EM+ +G P VI+Y+ ++ C+Q LL+ M G P+ +TY
Sbjct: 482 GNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITY 541
Query: 311 TTVMSYLAKSGDFEEAIRI-TEKMKIV 336
++ K+G E+ +++ EK IV
Sbjct: 542 NILLEGHCKNGKAEDLLKLRNEKGLIV 568
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 101/230 (43%), Gaps = 16/230 (6%)
Query: 291 VYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIY 350
++ E+ G PP V Y +++ K G +A I +++ G +P + FN LI
Sbjct: 207 IWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLIN 266
Query: 351 TLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHC 410
L ++ + E + + M EN + PD T++ +I G + A + +EM +
Sbjct: 267 GLCKSRNLDEGFRLKKT-MEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQ-RGL 324
Query: 411 KPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSL------DITTYTLVIHGLCRA 464
+PN TF L+ ++ S+ +D +N +H L D+ Y +++GLC+
Sbjct: 325 RPNGITFTALIDGQYR--------SRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKV 376
Query: 465 NKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
A L EM + P T ++D ++ ++A +I M +
Sbjct: 377 GDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNE 426
>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
Length = 833
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/400 (26%), Positives = 180/400 (45%), Gaps = 6/400 (1%)
Query: 111 KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLN 169
+DD A +F +S Y +++ L + ++++ L +EM KG +
Sbjct: 176 RDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTR 235
Query: 170 TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE- 228
T +++ G + A++ DE+ T N T +L+D LC+EGK+E A VF +
Sbjct: 236 TYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKM 295
Query: 229 LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
LK + P TFN I+G+CK V A + M+ C P + +Y+ +++ CR
Sbjct: 296 LKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKS 355
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
K + LL + G P+ VTY ++ K G A I M G +PD F L
Sbjct: 356 YKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTAL 415
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
I L + R+++A + M + G++ D TF +I G + + E M +
Sbjct: 416 IDGLCKLGRLEQANGILG-SMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVE-N 473
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
C TF+ L + K K +E + +L M+ K+ L + T+T++I G CRA +
Sbjct: 474 RCLTTAHTFNCFLDALGKDYKLNEA-NAMLGKMM-KYGLVPSVVTHTILIEGHCRAGETA 531
Query: 469 WAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+ + + M +P T +I++ + + AE I
Sbjct: 532 LSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETI 571
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 163/356 (45%), Gaps = 45/356 (12%)
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVFLEL---KSCIPPNAHTFNIFIHGWCKINRV 253
FGL+ + T +L + C+ + A VF ++ +SC PN+ T++I IHG C+ R+
Sbjct: 159 FGLDTHVCTSLVLAN--CRRDDLGEAFRVFEKMSKEESC-RPNSVTYSILIHGLCEAGRL 215
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
+EA QEM GC P +Y+ +I++ C K ++LDEM + C PNV TYT +
Sbjct: 216 EEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTIL 275
Query: 314 MSYLAKSGDFEEAIRITEKMKIVG-----------------------------------S 338
+ L + G EEA + KM G
Sbjct: 276 IDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNC 335
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
KP+ R +N L+ L R S+ +A + + + +NG+ PD T+N ++ F G AF
Sbjct: 336 KPNIRTYNELMEGLCRVSKSYKAFLLLR-RVVDNGLLPDRVTYNILVDGFCKEGQLNMAF 394
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
++ MN +P+ TF L+ K G+ ++ + +L MV K +SLD T+T +I
Sbjct: 395 NIFNSMNS-AGLEPDGFTFTALIDGLCKLGRLEQA-NGILGSMV-KKGISLDEVTFTALI 451
Query: 459 HGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
G C+ K + LF+ M+ + T LD + + + + A + M K
Sbjct: 452 DGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMK 507
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/451 (22%), Positives = 186/451 (41%), Gaps = 63/451 (13%)
Query: 81 DEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWK-SALGIFRW--AGSC-PGYEHSSEI 136
+ VF+ + + +C I + L+N K+ W SA + G+C P +E+
Sbjct: 289 NGVFRKMLKHGLCPGIITFNALINGYC---KEGWVVSAFQLLSVMEKGNCKPNIRTYNEL 345
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGT 196
E + + + +R +++ VT N + F GQ A F+ + +
Sbjct: 346 MEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVD---GFCKEGQLNMAFNIFNSMNS 402
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--------------------------- 229
GLE + T L+D LCK G++E A + +
Sbjct: 403 AGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKD 462
Query: 230 ----------KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
C+ AHTFN F+ K +++EA + +M +G P V++++ +I
Sbjct: 463 VCFLFENMVENRCLT-TAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILI 521
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
+ +CR + ++L+ M+ GC PNV TYT +++ L +G EEA I M G
Sbjct: 522 EGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVS 581
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF--SHHGHHEKA 397
P+ + L+ +A R+ A + M +NG P++ ++ +++ F S+ +A
Sbjct: 582 PNHFTYAVLVKAHVKAGRLDRAFQIVST-MVKNGCQPNSHIYSALLSGFVLSNTAIGARA 640
Query: 398 FHVLEEMNKL----EHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
+++ E N + H F+ D L + D + K + +
Sbjct: 641 LSSTGDLDARSLSSEENDNNCLSSH-----VFRLMDVDHALK--IRDEIKKCGVPTE-DL 692
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
Y ++ GLC+ + A L ++M+ H + P
Sbjct: 693 YNFLVVGLCKEGRIIEADQLTQDMVKHGLFP 723
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 123/246 (50%), Gaps = 6/246 (2%)
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
+PC YST++ + + + M +G + Y TV++ L K+G + A
Sbjct: 93 YPC---YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEM 149
Query: 329 ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF 388
K+ +G D+ L+ R + EA V++ E P++ T++ +I
Sbjct: 150 FCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGL 209
Query: 389 SHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
G E+AF + +EM + + C+P+ +T+ L+K+ G TD+ + ++LD+M K +
Sbjct: 210 CEAGRLEEAFQLKQEMVE-KGCQPSTRTYTVLIKAKCDIGMTDKAM-KMLDEMATKACVP 267
Query: 449 LDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
++ TYT++I LCR K E A +F++M+ H + P T +++ ++ +A ++
Sbjct: 268 -NVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQL 326
Query: 509 EAVMKK 514
+VM+K
Sbjct: 327 LSVMEK 332
>gi|255660872|gb|ACU25605.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
Length = 484
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 190/388 (48%), Gaps = 14/388 (3%)
Query: 100 HYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEE 159
H LV ++H + + AL FRW +EH+ E + +++ILG+ +++ R +L +
Sbjct: 12 HELVYNVLHS-SNTXEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLD 70
Query: 160 M-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
M KG + ++ + G +++V+ F ++ +E+ ++ N L + + G+
Sbjct: 71 MPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELXVERTIKSYNALFKVILRRGR 130
Query: 219 VELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
+A+ F + L I P HTFN+ I G+ +V+ A ++MK P V++Y+T
Sbjct: 131 YMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNT 190
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+I Y R + + EM+ + P VVTYTT++ ++A+R+ Z+MK G
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVZEMKGXG 250
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP-DTSTFNTMITMFSHHGHHEK 396
KP++ ++ L+ L A ++ EA + + EM + +AP D S F +I G+ +
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMSEARVJLK-EMMDKYLAPTDNSIFMRLIXSHCKSGNLDA 309
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK-------HHLSL 449
A VL+ M +L L+++ K G+ D+ + +LLD ++ K L L
Sbjct: 310 AADVLKAMIRLS-VPTEAGHXGXLIENFCKVGQYDKAV-KLLDKLIEKDIILRPQSTLHL 367
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEM 477
+ + Y +I LC + A L +++
Sbjct: 368 EPSAYNPMIEYLCNNGQAXKAETLVRQL 395
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 123/281 (43%), Gaps = 4/281 (1%)
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQ 257
E N ET +++ L + K+ AR + L++ K + + + + I + K V E+
Sbjct: 41 FEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESV 100
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
Q+M+ + SY+ + + R+ + ++M ++G P T+ ++
Sbjct: 101 KMFQKMEELXVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGF 160
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
SG E A R E MK PD +N +I R +++EA Y VEM + P
Sbjct: 161 FLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEK-YFVEMKGRNIEPT 219
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
T+ T+I + + A ++ZEM K KPN T+ LL K E J
Sbjct: 220 VVTYTTLIKGYVSVDQVDDALRLVZEM-KGXGIKPNAITYSTLLPGLCNAEKMSEA-RVJ 277
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
L +M++K+ D + + +I C++ + A + K MI
Sbjct: 278 LKEMMDKYLAPTDNSIFMRLIXSHCKSGNLDAAADVLKAMI 318
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 126/267 (47%), Gaps = 6/267 (2%)
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
+ ++++ A+ + +M G + +I SY ++ + ++ +M+ +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELXVERTIK 116
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
+Y + + + G + A R KM G +P FN +I+ + +V+ A ++ +
Sbjct: 117 SYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFE-D 175
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M ++PD T+NTMI + E+A EM K + +P V T+ L+K
Sbjct: 176 MKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEM-KGRNIEPTVVTYTTLIKGYVSVD 234
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ D+ L +L+++M + + TY+ ++ GLC A K A +J KEM+ + P +
Sbjct: 235 QVDDAL-RLVZEM-KGXGIKPNAITYSTLLPGLCNAEKMSEARVJLKEMMDKYLAPTDNS 292
Query: 489 C--RLILDEVKQKHMYDAAEKIEAVMK 513
RLI K ++ AA+ ++A+++
Sbjct: 293 IFMRLIXSHCKSGNLDAAADVLKAMIR 319
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 5/205 (2%)
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N T+ ++ L ++ A I M G + D + +I + G+ VQE+V ++
Sbjct: 44 NRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMF 103
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
Q +M E V ++N + + G + A +M E +P TF+ ++ F
Sbjct: 104 Q-KMEELXVERTIKSYNALFKVILRRGRYMMAKRYFNKMLS-EGIEPTRHTFNVMIWGFF 161
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
+GK E ++ +DM ++ +S D+ TY +I+G R K E A F EM G +I P
Sbjct: 162 LSGKV-ETANRFFEDMKSRE-ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPT 219
Query: 486 YQT-CRLILDEVKQKHMYDAAEKIE 509
T LI V + DA +Z
Sbjct: 220 VVTYTTLIKGYVSVDQVDDALRLVZ 244
>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
Length = 798
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 170/402 (42%), Gaps = 48/402 (11%)
Query: 155 ALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLC 214
+L M + + T + + R AG + A + G T + LL LC
Sbjct: 86 SLFNRMPRADLCTYSIVIGCCSR---AGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLC 142
Query: 215 KEGKVELARSVFLELKSCI--PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH----GC 268
+ + A + L + PNA ++NI + G C NR +A + M GC
Sbjct: 143 HDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGC 202
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN---------------------- 306
P V+SY+T+I R+ K Y L DEM QG PN
Sbjct: 203 PPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIG 262
Query: 307 -------------VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLG 353
VVTY T+M YL K+G EA ++ + M G KPDS + L++
Sbjct: 263 IFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYA 322
Query: 354 RASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPN 413
+ + + V M NG PD FN +I ++ HG ++A +M + + PN
Sbjct: 323 TEGYLVQMHQLLDV-MVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQ-QGLHPN 380
Query: 414 VQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLL 473
+ T+ ++ + + GK D+ +SQ D + L+ + + +IHGLC +K + A L
Sbjct: 381 IVTYGTVMDALCRVGKVDDAMSQF--DRLISEGLTPNGVVFRTLIHGLCACDKWDKAEEL 438
Query: 474 FKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
EMIG I P +L+ + ++ M A+ I +M ++
Sbjct: 439 AVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRV 480
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 184/392 (46%), Gaps = 9/392 (2%)
Query: 125 GSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQ 183
G CP S Y +++ L + Q+D+ L +EM +G T ++ + +G+
Sbjct: 200 GGCPPDVVS---YTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGK 256
Query: 184 WEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNI 242
++A+ F ++ G+E + T N L+ LCK G+ AR VF + K P++ +
Sbjct: 257 PKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGT 316
Query: 243 FIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
+HG+ + + + M +G P ++ +I +Y + + +M+ QG
Sbjct: 317 LLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQG 376
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
PN+VTY TVM L + G ++A+ +++ G P+ F LI+ L + +A
Sbjct: 377 LHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAE 436
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLK 422
+ VEM G+ P+T FNT++ G +A ++ + M +++ + +V T+ L+
Sbjct: 437 EL-AVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVD-VQCDVITYTTLID 494
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
GK DE ++LL+ MV + + TY +I+G C+ + E A LF++M +
Sbjct: 495 GYCLDGKVDEA-TKLLEGMV-LDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGV 552
Query: 483 TPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
P IL + Q AA+++ M K
Sbjct: 553 NPGIVIYSTILHGLFQTRRIAAAKELYLWMIK 584
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 171/373 (45%), Gaps = 6/373 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVM-RRFSGAGQWEDA 187
G++ S IY ++ + QM LL+ M + + I ++ ++ G ++A
Sbjct: 306 GHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEA 365
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHG 246
+ F ++ GL N T ++D LC+ GKV+ A S F L S + PN F IHG
Sbjct: 366 MLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHG 425
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C ++ D+A+ EM G G P I ++T++ C++ ++ + D M +
Sbjct: 426 LCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCD 485
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
V+TYTT++ G +EA ++ E M + G KP+ +N +I + R+++A +++
Sbjct: 486 VITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFR 545
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
+M GV P ++T++ A + M K P + T++ +L+ +
Sbjct: 546 -QMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLP-IGTYNIILQGLCQ 603
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
TD+ L + + HL T+ ++I L + + + A LF ++ + P
Sbjct: 604 NNCTDDALRMFHNLCLIDFHLQ--NRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNV 661
Query: 487 QTCRLILDEVKQK 499
T L++ + ++
Sbjct: 662 VTYWLMMKSLIEQ 674
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 170/395 (43%), Gaps = 17/395 (4%)
Query: 45 CSDGARLDHHQVL--CVDSPRLPDIDVIISKVHVGSSEDEVFQ--SLKQDHVCNAIQPSH 100
C +G ++ +V V PD + + +H ++E + Q L V N QP H
Sbjct: 287 CKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDH 346
Query: 101 YLVNKLI-----HRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRA 155
Y+ N LI H D+ A R G P + Y ++D L +V ++D +
Sbjct: 347 YIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHP----NIVTYGTVMDALCRVGKVDDAMS 402
Query: 156 LLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLC 214
+ + S+G ++ +W+ A E+ G+ NT N LL+ LC
Sbjct: 403 QFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLC 462
Query: 215 KEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI 273
KEG V A+++F L ++ + + T+ I G+C +VDEA ++ M G P +
Sbjct: 463 KEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEV 522
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
+Y+TII YC+ L +M ++G P +V Y+T++ L ++ A + M
Sbjct: 523 TYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWM 582
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
G K +N ++ L + + +A+ ++ + TFN MI G
Sbjct: 583 IKCGIKLPIGTYNIILQGLCQNNCTDDALRMFH-NLCLIDFHLQNRTFNIMIDALLKGGR 641
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
H++A + + PNV T+ ++KS + G
Sbjct: 642 HDEAKDLFASL-LARGLVPNVVTYWLMMKSLIEQG 675
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 126/272 (46%), Gaps = 10/272 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++D ++D+ LLE M K + VT NTI + + G+ EDA F
Sbjct: 489 YTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTI---INGYCKNGRIEDACSLFR 545
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKIN 251
++ + G+ + +L L + ++ A+ ++L + C I T+NI + G C+ N
Sbjct: 546 QMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNN 605
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
D+A + H +++ +I + + + +L + A+G PNVVTY
Sbjct: 606 CTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYW 665
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
+M L + G EE + ++ G DSR N L+ L + V++A VY ++ E
Sbjct: 666 LMMKSLIEQGLLEELDDLFLSLEKNGCTADSRMLNALVGKLPQKGEVRKA-GVYLSKIDE 724
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEE 403
N + + ST +++ + S G +++ + + E
Sbjct: 725 NNFSLEASTAESLVFLVS-SGKYDQHINSIPE 755
>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
Length = 1088
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 198/411 (48%), Gaps = 7/411 (1%)
Query: 106 LIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGH 164
L H K D SAL +F G E ++ Y +++ L ++++ L+ EM G
Sbjct: 428 LGHCRKHDLDSALQVFNQMAK-EGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGI 486
Query: 165 IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARS 224
+ T +T + G +EDA R F ++ G E N T L+ LC G +++A
Sbjct: 487 LPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIG 546
Query: 225 VFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYC 283
+F + + + PN T+N I+ + R+ A + M +G +++Y+ +I+ YC
Sbjct: 547 LFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYC 606
Query: 284 RQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSR 343
+ K +++ M +G N+VTY T++ SG+ A+RI + M+ G KPD
Sbjct: 607 ILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEW 666
Query: 344 FFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEE 403
+ LI + S+++ A ++ EM ++G+ P+ T+ +I + + A +LE
Sbjct: 667 SYTELICGFCKISKMESAFGLFN-EMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEH 725
Query: 404 MNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCR 463
M K C+PNVQT++ L+ K + + ++ L ++ + + ++ TYT +I GLC+
Sbjct: 726 M-KRSGCRPNVQTYNVLIHGLTK--QNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCK 782
Query: 464 ANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
A +F +MI P T ++ + Q+ + AE + A +++
Sbjct: 783 NGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELER 833
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 169/355 (47%), Gaps = 16/355 (4%)
Query: 73 KVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEH 132
KV +G +F + +D V + L+N L+ + K A + G + +
Sbjct: 542 KVAIG-----LFHRMSRDGVFPNTVTYNALINILVENRR--IKYAFVVLNLMGRNGLFTN 594
Query: 133 SSEIYEMMVD--ILGKVRQ-MDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVR 189
EM+ ILG ++ M M +L+ ++VT NTI K + +G A+R
Sbjct: 595 IVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIK---GYCDSGNTTSALR 651
Query: 190 TFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWC 248
D + G + + + L+ CK K+E A +F E+ + PN T+ I G+C
Sbjct: 652 ILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYC 711
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
K ++D A ++ MK GC P V +Y+ +I +Q NFS EL M +G PNVV
Sbjct: 712 KDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVV 771
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
TYT ++ L K+G A+ + KM G P+ ++ LI LG+ +V+EA ++ E
Sbjct: 772 TYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLF-AE 830
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
+ +G+ PD T+ MI + G E AF+ L M K C+P + T+ L+K
Sbjct: 831 LERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIK-AGCQPTLWTYGVLIKG 884
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 170/387 (43%), Gaps = 53/387 (13%)
Query: 164 HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELAR 223
H+ L A VM R+ R E G++ N N +++ LCK+G V A
Sbjct: 359 HLSRLGMTAAVMDRYH---------RMLSE----GVQPNLLIYNAVINALCKDGNVADAE 405
Query: 224 SVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSY 282
++ ++ +S + P+ T+ I G C+ + +D A +M GC P ++YST+I
Sbjct: 406 TIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGL 465
Query: 283 CRQYNFSKVYELLDEM-----------------------------------QAQGCPPNV 307
C ++ ++L+ EM + +GC PNV
Sbjct: 466 CDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNV 525
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
TYT ++S L SG + AI + +M G P++ +N LI L R++ A V +
Sbjct: 526 YTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNL 585
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKT 427
M NG+ + T+N MI + G +KA V+ M + H N+ T++ ++K +
Sbjct: 586 -MGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGH-SANLVTYNTIIKGYCDS 643
Query: 428 GKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
G T L L D++ D +YT +I G C+ +K E A+ LF EM+ + P
Sbjct: 644 GNTTSALRIL--DLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEV 701
Query: 488 TCRLILDEVKQKHMYDAAEKIEAVMKK 514
T ++D + D A + MK+
Sbjct: 702 TYTALIDGYCKDEKLDTATSLLEHMKR 728
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 102/432 (23%), Positives = 181/432 (41%), Gaps = 52/432 (12%)
Query: 87 LKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWA---GSCPGYEHSSEIYEMMV 141
L +D C +P + +LI F +SA G+F G CP + Y ++
Sbjct: 655 LMRDGGC---KPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCP----NEVTYTALI 707
Query: 142 DILGKVRQMDQMRALLEEMSKG----HIVTLNTIAKVMRR---FSGAGQWEDAVRTFDEL 194
D K ++D +LLE M + ++ T N + + + FSGA E+ + E
Sbjct: 708 DGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGA---EELCKVMIEE 764
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINR 252
G F N T ++D LCK G LA +F ++ + C+P N T++ I + +
Sbjct: 765 GIF---PNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLP-NLLTYSSLIRALGQEGK 820
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
V+EA+ E++ HG P I+Y +I++Y + L M GC P + TY
Sbjct: 821 VEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGV 880
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN 372
++ L E + +++ + PD NC + G + Q+AV V ++ E
Sbjct: 881 LIKGLKN-----EYLLADQRLAAL---PDV-VPNC---SFGYQTTDQDAVSVMSAKLAEL 928
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
N +++ S G +A +L M C P+ + ++ LL S + D
Sbjct: 929 DPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLC-PDQEAYNSLLCSLLRVRNVD- 986
Query: 433 CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLI 492
L+ + ++ + + Y +I LC+ ++ + A + F+ M+ P
Sbjct: 987 -LAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNP-------- 1037
Query: 493 LDEVKQKHMYDA 504
D+V Q + D
Sbjct: 1038 -DDVVQAVLIDG 1048
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 101/224 (45%), Gaps = 6/224 (2%)
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
+ +YS ++ R + V + M ++G PN++ Y V++ L K G+ +A I +
Sbjct: 350 LFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMK 409
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHH 391
K+ PD+ + +I R + A+ V+ +M + G P+T T++T+I
Sbjct: 410 KVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFN-QMAKEGCEPNTVTYSTLINGLCDS 468
Query: 392 GHHEKAFHVLEEMNKLEHCKPNVQT-FHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLD 450
G +AF ++ EM L P T P++ C D +L DM NK +
Sbjct: 469 GRVNEAFDLIREM-ILHGILPTAHTCTGPIIALCDMGCYEDAW--RLFVDMKNK-GCEPN 524
Query: 451 ITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
+ TYT +I GLC + + A LF M + P T +++
Sbjct: 525 VYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALIN 568
>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Brachypodium distachyon]
Length = 554
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 141/297 (47%), Gaps = 4/297 (1%)
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQ 257
G+ T N+L+ + G++ AR VF E++ + P TFN I G C+ +D
Sbjct: 181 GMAPETRLFNVLMRDFVRLGELVSARKVFDEMRRSVQPTVVTFNTLISGMCRARDLDAVD 240
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
+EM G P V +Y +I+ +CR ++ +EM+ G PN V +TT++
Sbjct: 241 GLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAH 300
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
K G+ + + + M++ G PD +N L+ L RA ++ A + + EM G+ PD
Sbjct: 301 CKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVE-EMKNAGLKPD 359
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
T+ T+I G + A + ++M + E V T+ L+ K G+ + ++
Sbjct: 360 KVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEV-TYTALISGLSKAGRPVDA-ERV 417
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
L +M+ + L D TTYT+VI CR + + L KEM P T +I++
Sbjct: 418 LREMM-EAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMN 473
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 163/322 (50%), Gaps = 6/322 (1%)
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC- 232
+MR F G+ A + FDE+ ++ T N L+ +C+ ++ ++ E+
Sbjct: 192 LMRDFVRLGELVSARKVFDEM-RRSVQPTVVTFNTLISGMCRARDLDAVDGLYKEMSDVG 250
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
+ P+ +T+ I G+C+ R++ A EM+ G +P + ++T+I ++C++ N +
Sbjct: 251 VKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGM 310
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
+L +M+ +G P++V Y +++ L ++ + + A I E+MK G KPD + LI
Sbjct: 311 DLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGC 370
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
+ ++ A+ + Q +M E V+ D T+ +I+ S G A VL EM + +P
Sbjct: 371 CKDGKLDMAMDIKQ-KMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMME-AALEP 428
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
+ T+ ++ + + G +LL +M NK + TY ++++GLC+ + + A +
Sbjct: 429 DNTTYTMVIDAFCRKGDVKTGF-KLLKEMQNKGK-KPGVVTYNVIMNGLCKLGQMKNADM 486
Query: 473 LFKEMIGHDITPRYQTCRLILD 494
L M+ ++P T ++LD
Sbjct: 487 LLHAMLNIGVSPDDITYNILLD 508
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 127/266 (47%), Gaps = 5/266 (1%)
Query: 229 LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
L + + P FN+ + + ++ + A+ EM+ P V++++T+I CR +
Sbjct: 178 LDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEMR-RSVQPTVVTFNTLISGMCRARDL 236
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
V L EM G P+V TY ++ ++G E A+++ +M+ G P++ F L
Sbjct: 237 DAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTL 296
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
I + V + +YQ +M GV PD +N ++ + + A ++EEM K
Sbjct: 297 IDAHCKEGNVNAGMDLYQ-DMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEM-KNA 354
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
KP+ T+ L+ C K GK D + + + + +SLD TYT +I GL +A +
Sbjct: 355 GLKPDKVTYTTLIDGCCKDGKLDMAMD--IKQKMAEKEVSLDEVTYTALISGLSKAGRPV 412
Query: 469 WAYLLFKEMIGHDITPRYQTCRLILD 494
A + +EM+ + P T +++D
Sbjct: 413 DAERVLREMMEAALEPDNTTYTMVID 438
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 151/329 (45%), Gaps = 9/329 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
+ ++ + + R +D + L +EMS G + T +++ F G+ E+AV+ F+E+
Sbjct: 223 FNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMR 282
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVD 254
G+ N L+D CKEG V ++ +++ + P+ +N ++G C+ +
Sbjct: 283 DTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLK 342
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
A+ ++EMK G P ++Y+T+I C+ ++ +M + + VTYT ++
Sbjct: 343 AAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALI 402
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
S L+K+G +A R+ +M +PD+ + +I R V+ + + EM G
Sbjct: 403 SGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLK-EMQNKGK 461
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
P T+N ++ G + A +L M + P+ T++ LL K GK
Sbjct: 462 KPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNI-GVSPDDITYNILLDGQCKHGKVANS- 519
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCR 463
+++ + + D YT +I L +
Sbjct: 520 ----EELESSKGMVPDFAVYTSLISELAK 544
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 135/296 (45%), Gaps = 9/296 (3%)
Query: 95 AIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQ 152
++P Y LI F ++A+ +F G ++ ++ ++D K ++
Sbjct: 250 GVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDT-GVNPNAVVFTTLIDAHCKEGNVNA 308
Query: 153 MRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLD 211
L ++M +G + L ++ A + A +E+ GL+ + T L+D
Sbjct: 309 GMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLID 368
Query: 212 TLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHP 270
CK+GK+++A + ++ + + + T+ I G K R +A+ ++EM P
Sbjct: 369 GCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEP 428
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRIT 330
+Y+ +I ++CR+ + ++LL EMQ +G P VVTY +M+ L K G + A +
Sbjct: 429 DNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLL 488
Query: 331 EKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
M +G PD +N L+ + +V + + G+ PD + + ++I+
Sbjct: 489 HAMLNIGVSPDDITYNILLDGQCKHGKVANSEELES----SKGMVPDFAVYTSLIS 540
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 98/234 (41%), Gaps = 11/234 (4%)
Query: 279 IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
+ S Y F +LLD G P + +M + G+ A ++ ++M+
Sbjct: 164 LPSTPEAYTF--YLQLLD----AGMAPETRLFNVLMRDFVRLGELVSARKVFDEMR-RSV 216
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
+P FN LI + RA + +Y+ EM + GV PD T+ +I F G E A
Sbjct: 217 QPTVVTFNTLISGMCRARDLDAVDGLYK-EMSDVGVKPDVYTYGALIKGFCRTGRMENAV 275
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
+ EM PN F L+ + K G + + L DM + + D+ Y ++
Sbjct: 276 KMFNEMRD-TGVNPNAVVFTTLIDAHCKEGNVNAGM-DLYQDMRVRGVMP-DLVAYNALV 332
Query: 459 HGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
+GLCRA + A + +EM + P T ++D + D A I+ M
Sbjct: 333 NGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKM 386
>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
mitochondrial [Vitis vinifera]
Length = 876
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/400 (26%), Positives = 180/400 (45%), Gaps = 6/400 (1%)
Query: 111 KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLN 169
+DD A +F +S Y +++ L + ++++ L +EM KG +
Sbjct: 219 RDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTR 278
Query: 170 TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE- 228
T +++ G + A++ DE+ T N T +L+D LC+EGK+E A VF +
Sbjct: 279 TYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKM 338
Query: 229 LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
LK + P TFN I+G+CK V A + M+ C P + +Y+ +++ CR
Sbjct: 339 LKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKS 398
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
K + LL + G P+ VTY ++ K G A I M G +PD F L
Sbjct: 399 YKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTAL 458
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
I L + R+++A + M + G++ D TF +I G + + E M +
Sbjct: 459 IDGLCKLGRLEQANGILG-SMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVE-N 516
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
C TF+ L + K K +E + +L M+ K+ L + T+T++I G CRA +
Sbjct: 517 RCLTTAHTFNCFLDALGKDYKLNEA-NAMLGKMM-KYGLVPSVVTHTILIEGHCRAGETA 574
Query: 469 WAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+ + + M +P T +I++ + + AE I
Sbjct: 575 LSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETI 614
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 163/356 (45%), Gaps = 45/356 (12%)
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVFLEL---KSCIPPNAHTFNIFIHGWCKINRV 253
FGL+ + T +L + C+ + A VF ++ ++C PN+ T++I IHG C+ R+
Sbjct: 202 FGLDTHVCTSLVLAN--CRRDDLGEAFRVFEKMSKEENC-RPNSVTYSILIHGLCEAGRL 258
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
+EA QEM GC P +Y+ +I++ C K ++LDEM + C PNV TYT +
Sbjct: 259 EEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTIL 318
Query: 314 MSYLAKSGDFEEAIRITEKMKIVG-----------------------------------S 338
+ L + G EEA + KM G
Sbjct: 319 IDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNC 378
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
KP+ R +N L+ L R S+ +A + + + +NG+ PD T+N ++ F G AF
Sbjct: 379 KPNIRTYNELMEGLCRVSKSYKAFLLLR-RVVDNGLLPDRVTYNILVDGFCKEGQLNMAF 437
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
++ MN +P+ TF L+ K G+ ++ + +L MV K +SLD T+T +I
Sbjct: 438 NIFNSMNS-AGLEPDGFTFTALIDGLCKLGRLEQA-NGILGSMV-KKGISLDEVTFTALI 494
Query: 459 HGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
G C+ K + LF+ M+ + T LD + + + + A + M K
Sbjct: 495 DGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMK 550
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/451 (22%), Positives = 186/451 (41%), Gaps = 63/451 (13%)
Query: 81 DEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWK-SALGIFRW--AGSC-PGYEHSSEI 136
+ VF+ + + +C I + L+N K+ W SA + G+C P +E+
Sbjct: 332 NGVFRKMLKHGLCPGIITFNALINGYC---KEGWVVSAFQLLSVMEKGNCKPNIRTYNEL 388
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGT 196
E + + + +R +++ VT N + F GQ A F+ + +
Sbjct: 389 MEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVD---GFCKEGQLNMAFNIFNSMNS 445
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--------------------------- 229
GLE + T L+D LCK G++E A + +
Sbjct: 446 AGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKD 505
Query: 230 ----------KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
C+ AHTFN F+ K +++EA + +M +G P V++++ +I
Sbjct: 506 VCFLFENMVENRCLT-TAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILI 564
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
+ +CR + ++L+ M+ GC PNV TYT +++ L +G EEA I M G
Sbjct: 565 EGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVS 624
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF--SHHGHHEKA 397
P+ + L+ +A R+ A + M +NG P++ ++ +++ F S+ +A
Sbjct: 625 PNHFTYAVLVKAHVKAGRLDRAFQIVST-MVKNGCQPNSHIYSALLSGFVLSNTAIGARA 683
Query: 398 FHVLEEMNKL----EHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
+++ E N + H F+ D L + D + K + +
Sbjct: 684 LSSTGDLDARSLSSEENDNNCLSSH-----VFRLMDVDHALK--IRDEIKKCGVPTE-DL 735
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
Y ++ GLC+ + A L ++M+ H + P
Sbjct: 736 YNFLVVGLCKEGRIIEADQLTQDMVKHGLFP 766
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 123/246 (50%), Gaps = 6/246 (2%)
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
+PC YST++ + + + M +G + Y TV++ L K+G + A
Sbjct: 136 YPC---YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEM 192
Query: 329 ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF 388
K+ +G D+ L+ R + EA V++ E P++ T++ +I
Sbjct: 193 FCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGL 252
Query: 389 SHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
G E+AF + +EM + + C+P+ +T+ L+K+ G TD+ + ++LD+M K +
Sbjct: 253 CEAGRLEEAFQLKQEMVE-KGCQPSTRTYTVLIKAKCDIGMTDKAM-KMLDEMATKACVP 310
Query: 449 LDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
++ TYT++I LCR K E A +F++M+ H + P T +++ ++ +A ++
Sbjct: 311 -NVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQL 369
Query: 509 EAVMKK 514
+VM+K
Sbjct: 370 LSVMEK 375
>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 730
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/405 (23%), Positives = 185/405 (45%), Gaps = 48/405 (11%)
Query: 114 WKSALGIFRWAGSC-----------------------------------PGYEHSSEIYE 138
W AL +F W GY Y
Sbjct: 62 WNKALEVFNWMRQSVNFRPDGVTIAVMLRILGRESQLTTVSRLFKSLREEGYPLDVYAYT 121
Query: 139 MMVDILGKVRQMDQMRALLEEMSKG----HIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
++ L + R+ + E+M + +VT N I + + WE+ + F+E+
Sbjct: 122 SLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGK--KGRSWENILELFEEM 179
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKV-ELARSVFLELKSC-IPPNAHTFNIFIHGWCKINR 252
G++ + T N + T C G + E A +F ++KS P+ T+N + + K
Sbjct: 180 KAQGIQPDEYTYNTAI-TACASGSLCEEATELFTQMKSSNCTPDRVTYNALLDVYGKAGW 238
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
+EA ++EM+ GC P +++Y+ ++ ++ R + E+ D M ++G P+V TYT+
Sbjct: 239 YNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTS 298
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN 372
++S +++G E+A+ I +M+ P+S FN LI G+ E + +++ +M
Sbjct: 299 LLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFE-DMQAC 357
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
GV PD T+N+++ F +G + + V M K +P+ TF+ L+++ + G +D+
Sbjct: 358 GVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGF-EPDKATFNILIEAYGRCGSSDQ 416
Query: 433 CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
LS + D M+ + + D+ T+ ++ L R + E A L+ E+
Sbjct: 417 ALS-IYDGML-QAGCTPDLATFNTLLAALAREGRWEHAELILDEL 459
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 115/480 (23%), Positives = 209/480 (43%), Gaps = 67/480 (13%)
Query: 83 VFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIF---RWAGSCPGYEHSSEIYEM 139
+F+SL+++ + L++ L K +K ALG F + AG P S Y +
Sbjct: 104 LFKSLREEGYPLDVYAYTSLISALSRNRK--FKEALGFFEQMKEAGPQP----SLVTYNV 157
Query: 140 MVDILGKV-RQMDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
++D+ GK R + + L EEM I T NT + + E+A F ++
Sbjct: 158 IIDLYGKKGRSWENILELFEEMKAQGIQPDEYTYNT---AITACASGSLCEEATELFTQM 214
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS--CIP------------------ 234
+ + T N LLD K G A +V E++S C+P
Sbjct: 215 KSSNCTPDRVTYNALLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLC 274
Query: 235 ----------------PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTI 278
P+ T+ + + + +V++A +M+ C P +++ +
Sbjct: 275 NAAAEMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNAL 334
Query: 279 IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
I + + NFS++ + ++MQA G P++VT+ +++ K+G + E +++ MK G
Sbjct: 335 IGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGF 394
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
+PD FN LI GR +A+ +Y M + G PD +TFNT++ + G E A
Sbjct: 395 EPDKATFNILIEAYGRCGSSDQALSIYD-GMLQAGCTPDLATFNTLLAALAREGRWEHAE 453
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT-----T 453
+L+E+N+ + KPN + +L + + G E L +++D + H + + T T
Sbjct: 454 LILDELNRSSY-KPNDIAYASMLHA-YANGGELEKLKEMVDTL---HTIYVPFTKILLKT 508
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
+ LV ++ E A+L + H T ++ +K M D A A+++
Sbjct: 509 FVLVYSKCSLVDEAEDAFLAMRH---HGYLSDTSTFNAMISMYGKKGMMDKATDTFALLR 565
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 155/351 (44%), Gaps = 13/351 (3%)
Query: 89 QDHVCNAIQPSHYLVNKLIHRFKDD--WKSALGIFRWAGSCPGYEHSSEIYEMMVDILGK 146
+D ++P N L+ F + + L +FR G+E + ++++ G+
Sbjct: 352 EDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKA-GFEPDKATFNILIEAYGR 410
Query: 147 VRQMDQMRALLEEMSKG----HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKN 202
DQ ++ + M + + T NT+ + R G+WE A DEL + N
Sbjct: 411 CGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAR---EGRWEHAELILDELNRSSYKPN 467
Query: 203 TETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQ 261
+L G++E + + L + +P F+ + K + VDEA+
Sbjct: 468 DIAYASMLHAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFL 527
Query: 262 EMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSG 321
M+ HG +++ +I Y ++ K + +++ G P+VVTY +M + G
Sbjct: 528 AMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREG 587
Query: 322 DFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTF 381
+ + + G PD +N +I++ + ++ A ++ EM NG+ PD+ T+
Sbjct: 588 MYRKCEATLRECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFH-EMVSNGIQPDSFTY 646
Query: 382 NTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
NT + + + G +A V++ M+K CKP+ T+ L+ + K GK +E
Sbjct: 647 NTFVGCYVNGGMFPEALSVVKHMHK-TGCKPDEVTYRTLVDAYCKIGKFEE 696
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 115/245 (46%), Gaps = 9/245 (3%)
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
P ++ + +++ R+ + V L ++ +G P +V YT+++S L+++ F+EA+
Sbjct: 79 RPDGVTIAVMLRILGRESQLTTVSRLFKSLREEGYPLDVYAYTSLISALSRNRKFKEALG 138
Query: 329 ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF 388
E+MK G +P +N +I G+ R E + EM G+ PD T+NT IT
Sbjct: 139 FFEQMKEAGPQPSLVTYNVIIDLYGKKGRSWENILELFEEMKAQGIQPDEYTYNTAITAC 198
Query: 389 SHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
+ E+A + +M K +C P+ T++ LL K G +E + +L +M + L
Sbjct: 199 ASGSLCEEATELFTQM-KSSNCTPDRVTYNALLDVYGKAGWYNEA-ANVLKEMESAGCLP 256
Query: 449 LDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+I TY ++ RA C A + M+ I P T +L Y A K+
Sbjct: 257 -NIVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTSLLSA------YSRAGKV 309
Query: 509 EAVMK 513
E M+
Sbjct: 310 EQAME 314
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 7/176 (3%)
Query: 163 GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELA 222
G++ +T ++ + G + A TF L + GLE + T N L+ +EG +
Sbjct: 533 GYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREG---MY 589
Query: 223 RSVFLELKSCIP----PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTI 278
R L+ C+ P+ ++N I + K ++ A EM +G P +Y+T
Sbjct: 590 RKCEATLRECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTF 649
Query: 279 IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
+ Y F + ++ M GC P+ VTY T++ K G FEE RI + +K
Sbjct: 650 VGCYVNGGMFPEALSVVKHMHKTGCKPDEVTYRTLVDAYCKIGKFEEVERILKFIK 705
>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
Length = 883
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/400 (26%), Positives = 180/400 (45%), Gaps = 6/400 (1%)
Query: 111 KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLN 169
+DD A +F +S Y +++ L + ++++ L +EM KG +
Sbjct: 242 RDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTR 301
Query: 170 TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE- 228
T +++ G + A++ DE+ T N T +L+D LC+EGK+E A VF +
Sbjct: 302 TYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKM 361
Query: 229 LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
LK + P TFN I+G+CK V A + M+ C P + +Y+ +++ CR
Sbjct: 362 LKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKS 421
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
K + LL + G P+ VTY ++ K G A I M G +PD F L
Sbjct: 422 YKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTAL 481
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
I L + R+++A + M + G++ D TF +I G + + E M +
Sbjct: 482 IDGLCKLGRLEQANGILG-SMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVE-N 539
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
C TF+ L + K K +E + +L M+ K+ L + T+T++I G CRA +
Sbjct: 540 RCLTTAHTFNCFLDALGKDYKLNEA-NAMLGKMM-KYGLVPSVVTHTILIEGHCRAGETA 597
Query: 469 WAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+ + + M +P T +I++ + + AE I
Sbjct: 598 LSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETI 637
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 163/356 (45%), Gaps = 45/356 (12%)
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVFLEL---KSCIPPNAHTFNIFIHGWCKINRV 253
FGL+ + T +L + C+ + A VF ++ ++C PN+ T++I IHG C+ R+
Sbjct: 225 FGLDTHVCTSLVLAN--CRRDDLGEAFRVFEKMSKEENC-RPNSVTYSILIHGLCEAGRL 281
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
+EA QEM GC P +Y+ +I++ C K ++LDEM + C PNV TYT +
Sbjct: 282 EEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTIL 341
Query: 314 MSYLAKSGDFEEAIRITEKMKIVG-----------------------------------S 338
+ L + G EEA + KM G
Sbjct: 342 IDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNC 401
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
KP+ R +N L+ L R S+ +A + + + +NG+ PD T+N ++ F G AF
Sbjct: 402 KPNIRTYNELMEGLCRVSKSYKAFLLLR-RVVDNGLLPDRVTYNILVDGFCKEGQLNMAF 460
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
++ MN +P+ TF L+ K G+ ++ + +L MV K +SLD T+T +I
Sbjct: 461 NIFNSMNS-AGLEPDGFTFTALIDGLCKLGRLEQA-NGILGSMV-KKGISLDEVTFTALI 517
Query: 459 HGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
G C+ K + LF+ M+ + T LD + + + + A + M K
Sbjct: 518 DGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMK 573
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 106/488 (21%), Positives = 201/488 (41%), Gaps = 71/488 (14%)
Query: 81 DEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWK-SALGIFRW--AGSC-PGYEHSSEI 136
+ VF+ + + +C I + L+N K+ W SA + G+C P +E+
Sbjct: 355 NGVFRKMLKHGLCPGIITFNALINGYC---KEGWVVSAFQLLSVMEKGNCKPNIRTYNEL 411
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGT 196
E + + + +R +++ VT N + F GQ A F+ + +
Sbjct: 412 MEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVD---GFCKEGQLNMAFNIFNSMNS 468
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--------------------------- 229
GLE + T L+D LCK G++E A + +
Sbjct: 469 AGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKD 528
Query: 230 ----------KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
C+ AHTFN F+ K +++EA + +M +G P V++++ +I
Sbjct: 529 VCFLFENMVENRCLT-TAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILI 587
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
+ +CR + ++L+ M+ GC PNV TYT +++ L +G EEA I M G
Sbjct: 588 EGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVS 647
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF--SHHGHHEKA 397
P+ + L+ +A R+ A + M +NG P++ ++ +++ F S+ +A
Sbjct: 648 PNHFTYAVLVKAHVKAGRLDRAFQIVST-MVKNGCQPNSHIYSALLSGFVLSNTAIGARA 706
Query: 398 FHVLEEM----------------NKLEHCK-PNVQTFHPLLKSCFKTGKTDECLSQLLDD 440
++ N+++ C P ++ L+ K G+ E QL D
Sbjct: 707 LSSTGDLDARSLSSEENDNNCLSNEIKKCGVPTEDLYNFLVVGLCKEGRIIEA-DQLTQD 765
Query: 441 MVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKH 500
MV KH L D +++ H C+ K + K ++ + P + + ++ ++ +
Sbjct: 766 MV-KHGLFPDKAISSIIEH-YCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEG 823
Query: 501 MYDAAEKI 508
A+K+
Sbjct: 824 RVQEAQKL 831
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 123/246 (50%), Gaps = 6/246 (2%)
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
+PC YST++ + + + M +G + Y TV++ L K+G + A
Sbjct: 159 YPC---YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEM 215
Query: 329 ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF 388
K+ +G D+ L+ R + EA V++ E P++ T++ +I
Sbjct: 216 FCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGL 275
Query: 389 SHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
G E+AF + +EM + + C+P+ +T+ L+K+ G TD+ + ++LD+M K +
Sbjct: 276 CEAGRLEEAFQLKQEMVE-KGCQPSTRTYTVLIKAKCDIGMTDKAM-KMLDEMATKACVP 333
Query: 449 LDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
++ TYT++I LCR K E A +F++M+ H + P T +++ ++ +A ++
Sbjct: 334 -NVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQL 392
Query: 509 EAVMKK 514
+VM+K
Sbjct: 393 LSVMEK 398
>gi|224114285|ref|XP_002316718.1| predicted protein [Populus trichocarpa]
gi|222859783|gb|EEE97330.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 184/400 (46%), Gaps = 8/400 (2%)
Query: 111 KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQ-MDQMRALLEEMSKGHIVTLN 169
+ D + AL F W+ Y H +Y +M+D+L K + R L + +G T
Sbjct: 60 QSDERVALDFFFWSDRQWRYRHDPIVYCVMLDVLSKTKLCQGARRVLRLMVRRGIQRTPQ 119
Query: 170 TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL 229
VM +S AG+ +A++ + G+E N N + L +E A FLE
Sbjct: 120 DFCCVMVSYSRAGKLRNAMQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKALR-FLER 178
Query: 230 KSC--IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYN 287
I PN T+N I G+C ++RV++A I EM GC P +SY T++ C+
Sbjct: 179 MQLLGIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRR 238
Query: 288 FSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNC 347
+V +++++M+ + VTY T++ L K +EA++ + + G + D ++
Sbjct: 239 IREVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSA 298
Query: 348 LIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKL 407
++ + + R+ +A + EM G PD T+ +I FS G +A +L++M K
Sbjct: 299 IVDSYCKEGRMDQAKEIVN-EMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYK- 356
Query: 408 EHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKC 467
CKPN ++ LK + G + E + + + + TY++V+HG R K
Sbjct: 357 HGCKPNTVSYTAFLKGLCQKGNSSEAREMM--KASEEQWWTPNAITYSVVMHGFRREGKL 414
Query: 468 EWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEK 507
A + +EMIG P L+L + + D A+K
Sbjct: 415 SDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKK 454
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 149/337 (44%), Gaps = 41/337 (12%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G++ Y +VD K +MDQ + ++ EM ++G I + T ++ FS AG+ A
Sbjct: 288 GFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQA 347
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHG 246
+ ++ G + NT + L LC++G AR + + PNA T+++ +HG
Sbjct: 348 RKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHG 407
Query: 247 W-----------------------------------CKINRVDEAQWTIQEMKGHGCHPC 271
+ C+I RVDEA+ ++E GC
Sbjct: 408 FRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEECLNMGCAVN 467
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
++++T+I +C+Q + LLD+M P+ VTYTT++ L K G EEA +T
Sbjct: 468 AVNFTTVIHRFCQQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGKKGRIEEATELTL 527
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHH 391
KM G P + +I+ G+ RV++ + + + + FN +I
Sbjct: 528 KMLKKGIDPTPVTYRTVIHRYGQIGRVEDLLNLLDKMLTRQEC---RTAFNQVIEKLCTF 584
Query: 392 GHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
G+ E A +L ++ + + + T H L++S + G
Sbjct: 585 GNLEAADKLLGKVLRTAS-RIDANTCHVLMESYLRKG 620
>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g02150
gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 761
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 190/427 (44%), Gaps = 56/427 (13%)
Query: 103 VNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-- 160
V +++ K+D K A F+W+ + G++HS E Y ++ IL R ++L+EM
Sbjct: 111 VPRVLVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVL 170
Query: 161 SKGH---------------------------IVTLNTIAKV------MRR---------- 177
SK ++ L + + M+R
Sbjct: 171 SKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSC 230
Query: 178 ------FSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK- 230
F+ G+ +D R F ++ G T N+++D +CKEG VE AR +F E+K
Sbjct: 231 NGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKF 290
Query: 231 SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSK 290
+ P+ T+N I G+ K+ R+D+ +EMK C P VI+Y+ +I +C+
Sbjct: 291 RGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPI 350
Query: 291 VYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIY 350
E EM+ G PNVV+Y+T++ K G ++AI+ M+ VG P+ + LI
Sbjct: 351 GLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLID 410
Query: 351 TLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHC 410
+ + +A + EM + GV + T+ +I ++A + +M+
Sbjct: 411 ANCKIGNLSDAFRLGN-EMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDT-AGV 468
Query: 411 KPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWA 470
PN+ +++ L+ K D L +LL+++ + + D+ Y I GLC K E A
Sbjct: 469 IPNLASYNALIHGFVKAKNMDRAL-ELLNELKGR-GIKPDLLLYGTFIWGLCSLEKIEAA 526
Query: 471 YLLFKEM 477
++ EM
Sbjct: 527 KVVMNEM 533
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 116/444 (26%), Positives = 196/444 (44%), Gaps = 12/444 (2%)
Query: 76 VGSSEDEV--FQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGI-FRWAGSCPGYEH 132
VG +D V F+ +K D C +P N LI+ F K +G+ F G +
Sbjct: 310 VGRLDDTVCFFEEMK-DMCC---EPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKP 365
Query: 133 SSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTF 191
+ Y +VD K M Q +M + G + T ++ G DA R
Sbjct: 366 NVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLG 425
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKI 250
+E+ G+E N T L+D LC +++ A +F ++ + + PN ++N IHG+ K
Sbjct: 426 NEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKA 485
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
+D A + E+KG G P ++ Y T I C +++EM+ G N + Y
Sbjct: 486 KNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIY 545
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
TT+M KSG+ E + + ++MK + + F LI L + V +AV +
Sbjct: 546 TTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISN 605
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKT 430
+ G+ + + F MI E A + E+M + + P+ + L+ FK G
Sbjct: 606 DFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQ-KGLVPDRTAYTSLMDGNFKQGNV 664
Query: 431 DECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCR 490
E L+ L D + + + LD+ YT ++ GL N+ + A +EMIG I P C
Sbjct: 665 LEALA--LRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCI 722
Query: 491 LILDEVKQKHMYDAAEKIEAVMKK 514
+L + + D A ++++ + K
Sbjct: 723 SVLKKHYELGCIDEAVELQSYLMK 746
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 8/215 (3%)
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
C P + + S L G EEAI+ KMK P +R N L++ + + +
Sbjct: 188 CVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVK 247
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLK 422
++ +M G P T+N MI G E A + EEM K P+ T++ ++
Sbjct: 248 RFFK-DMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEM-KFRGLVPDTVTYNSMID 305
Query: 423 SCFKTGKTDE--CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH 480
K G+ D+ C + + DM + D+ TY +I+ C+ K ++EM G+
Sbjct: 306 GFGKVGRLDDTVCFFEEMKDMCCEP----DVITYNALINCFCKFGKLPIGLEFYREMKGN 361
Query: 481 DITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
+ P + ++D ++ M A K M+++
Sbjct: 362 GLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRV 396
>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
Length = 953
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 189/407 (46%), Gaps = 45/407 (11%)
Query: 145 GKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTE 204
G+ +D R +L E + + ++++ +R+ G E+A F ++G GL +
Sbjct: 484 GQEAALDVYRDMLHEGVEANNFIVDSLVNGLRK---NGNIEEAEALFKDMGERGLLLDHV 540
Query: 205 TMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
L+D L K G + A V EL + + P+A +N+FI+ C++ + EA+ ++EM
Sbjct: 541 NYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEM 600
Query: 264 KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF 323
+ G P +Y+T+I + CR+ N SK +LL+EM+ PN++TYTT++ L ++G
Sbjct: 601 RNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVV 660
Query: 324 EEAIRITEKMKIVGSKP-----------------------------------DSRFFNCL 348
E+A + +M G P D +N L
Sbjct: 661 EKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTL 720
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
++ L ++A V EM G+APDT TFN +I H + AF +M +
Sbjct: 721 VHVLCCHGMTRKATIVLD-EMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLH-Q 778
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC-RANKC 467
PN+ TF+ LL G+ E + + + + K L + TY +++ G ++NK
Sbjct: 779 GLSPNIATFNTLLGGLESAGRIGEADTVICE--MKKMGLEPNNLTYDILVTGYAKKSNKV 836
Query: 468 EWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
E A L+ EM+ P+ T ++ + + M + A+++ + MK+
Sbjct: 837 E-ALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKR 882
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 152/311 (48%), Gaps = 9/311 (2%)
Query: 202 NTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTI 260
+T + N+ L L ++G LA V E+ K +P + T + + G + V EA +
Sbjct: 116 DTVSYNIFLAGLSEQGHGRLAPPVLSEMCKRGVPWDGVTMSTALVGLSRTGLVGEAA-AL 174
Query: 261 QEM--KGHGCHPC-VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
EM +G G V+ ++ +I YC+ + + +++ M QG +VV Y T+++
Sbjct: 175 AEMLVRGRGIDGLGVVGWNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGF 234
Query: 318 AKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
SGD + A + E+MK G +P LI + R++EA +Y+ M +GV PD
Sbjct: 235 FYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYE-GMVRSGVLPD 293
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQL 437
T + ++ G +A+ + EM+K+ PN T+ + S K + +E L L
Sbjct: 294 VVTLSALVDGLCRDGRFSEAYALFREMDKI-GVAPNHVTYCTFIDSLAKVQRVNESLG-L 351
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVK 497
L +MV++ +++D+ YT V+ L + K E A + + + +ITP T +++D
Sbjct: 352 LGEMVSR-GVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHC 410
Query: 498 QKHMYDAAEKI 508
+ D AE++
Sbjct: 411 RAGNIDGAEQM 421
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 171/398 (42%), Gaps = 55/398 (13%)
Query: 140 MVDILGKVRQMDQMRALLEEMSKGHIVT--------LNTIAKVMRRFSGAGQWEDAVRTF 191
+VD L + + + AL EM K + ++++AKV R +++
Sbjct: 300 LVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQR-------VNESLGLL 352
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFL-ELKSCIPPNAHTFNIFIHGWCKI 250
E+ + G+ + ++D L KEGK+E A+ V L I PN T+ + + C+
Sbjct: 353 GEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRA 412
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
+D A+ + +M+ P V+++S+I+ ++ +K + +M+ G PNVVTY
Sbjct: 413 GNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTY 472
Query: 311 TTVM-----------------------------------SYLAKSGDFEEAIRITEKMKI 335
T++ + L K+G+ EEA + + M
Sbjct: 473 GTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGE 532
Query: 336 VGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHE 395
G D + L+ L + + A+ V Q E+ E ++PD +N I G
Sbjct: 533 RGLLLDHVNYATLMDGLFKTGNMPAALKVGQ-ELMERNLSPDAVVYNVFINCLCRLGKFS 591
Query: 396 KAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYT 455
+A L+EM +P+ T++ ++ + + G T + L +LL++M + ++ TYT
Sbjct: 592 EAKSFLKEMRN-TGLEPDQATYNTMISAQCREGNTSKAL-KLLNEM-KWSSIKPNLITYT 648
Query: 456 LVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
++ GL A E A L EM TP T R +L
Sbjct: 649 TLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVL 686
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 150/344 (43%), Gaps = 48/344 (13%)
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIF 243
E+A ++ + G+ + T++ L+D LC++G+ A ++F E+ K + PN T+ F
Sbjct: 276 EEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTF 335
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCH---------------------------------- 269
I K+ RV+E+ + EM G
Sbjct: 336 IDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNI 395
Query: 270 -PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
P ++Y+ ++ ++CR N ++L +M+ + PNVVT++++++ L K G +A
Sbjct: 396 TPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAG 455
Query: 329 ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF 388
KMK G P+ + LI + + A+ VY+ +M GV + ++++
Sbjct: 456 YMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYR-DMLHEGVEANNFIVDSLVNGL 514
Query: 389 SHHGHHEKAFHVLEEMNK----LEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK 444
+G+ E+A + ++M + L+H + L+ FKTG L + + +
Sbjct: 515 RKNGNIEEAEALFKDMGERGLLLDHVN-----YATLMDGLFKTGNMPAALK--VGQELME 567
Query: 445 HHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+LS D Y + I+ LCR K A KEM + P T
Sbjct: 568 RNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQAT 611
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 136/295 (46%), Gaps = 9/295 (3%)
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIH 245
A+ + + T GL + N L+ G + A V +K+ + P+ T I
Sbjct: 208 ALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIG 267
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
+CK+ R++EA + M G P V++ S ++ CR FS+ Y L EM G P
Sbjct: 268 EYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAP 327
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N VTY T + LAK E++ + +M G D + ++ LG+ +++EA V
Sbjct: 328 NHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVL 387
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
+ + +N + P+ T+ ++ G+ + A +L +M + + PNV TF +L
Sbjct: 388 RHALSDN-ITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEE-KSVSPNVVTFSSILNGLV 445
Query: 426 KTGKTDECLSQLLDDM--VNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
K G C+++ M + ++ ++ TY +I G + E A ++++M+
Sbjct: 446 KRG----CIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDML 496
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 163/354 (46%), Gaps = 28/354 (7%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS-KG---HIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
+ ++D KV+ M A++E M+ +G +V NT+ + F +G + A +
Sbjct: 192 WNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTL---VAGFFYSGDADAAWEVAE 248
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKIN 251
+ G+E + T L+ CK ++E A +++ + +S + P+ T + + G C+
Sbjct: 249 RMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDG 308
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
R EA +EM G P ++Y T I S + ++ LL EM ++G ++V YT
Sbjct: 309 RFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYT 368
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL-----GRASRVQEAVYVYQ 366
TVM L K G EEA + + D+ NC+ YT+ RA + A +
Sbjct: 369 TVMDRLGKEGKIEEAKDVLRH-----ALSDNITPNCVTYTVLVDAHCRAGNIDGAEQML- 422
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
++M E V+P+ TF++++ G KA + +M K PNV T+ L+ FK
Sbjct: 423 LQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKM-KDSGIAPNVVTYGTLIDGFFK 481
Query: 427 TGKTDECLS---QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
+ L +L + V ++ +D +++GL + E A LFK+M
Sbjct: 482 CQGQEAALDVYRDMLHEGVEANNFIVDS-----LVNGLRKNGNIEEAEALFKDM 530
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 123/264 (46%), Gaps = 12/264 (4%)
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+N I G+CK+ + A ++ M G V+ Y+T++ + + +E+ + M+
Sbjct: 192 WNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMK 251
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
A G P+VVT+TT++ K EEA + E M G PD + L+ L R R
Sbjct: 252 ADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFS 311
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
EA +++ EM + GVAP+ T+ T I + ++ +L EM ++ +
Sbjct: 312 EAYALFR-EMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVS-RGVAMDLVMYTT 369
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT----TYTLVIHGLCRANKCEWAYLLFK 475
++ K GK +E L +H LS +IT TYT+++ CRA + A +
Sbjct: 370 VMDRLGKEGKIEEAKDVL------RHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLL 423
Query: 476 EMIGHDITPRYQTCRLILDEVKQK 499
+M ++P T IL+ + ++
Sbjct: 424 QMEEKSVSPNVVTFSSILNGLVKR 447
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 103/227 (45%), Gaps = 2/227 (0%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTF 240
G A DE+ G+ +T T N L+ CK ++ A + + + L + PN TF
Sbjct: 728 GMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATF 787
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
N + G R+ EA I EMK G P ++Y ++ Y ++ N + L EM +
Sbjct: 788 NTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVS 847
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
+G P TY +++S AK+G +A + +MK G S ++ L+ + E
Sbjct: 848 KGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTE 907
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKL 407
V + +M E G P T ++M FS G +A +L+ + K+
Sbjct: 908 -VRILLKDMKELGFKPSKGTISSMSRAFSKPGMTWEARRLLKTLFKV 953
>gi|357117116|ref|XP_003560320.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Brachypodium distachyon]
Length = 598
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 150/298 (50%), Gaps = 10/298 (3%)
Query: 215 KEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVIS 274
K G V A + EL+ +P + + ++GWC++ ++DEA+ + MK G P V+
Sbjct: 169 KTGHVAAAERLVEELQPRLPLSIRHYTALLYGWCRLGKLDEAKHVLARMKAAGVAPDVVV 228
Query: 275 YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
++T++ + F +EL EM+ + CPPN V+YTT+M L G +E +R+ +M+
Sbjct: 229 FNTLLAGFVAADRFEDAFELAREMERRDCPPNAVSYTTLMQGLGSRGRVDEVMRVFVEMR 288
Query: 335 IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHH 394
G PDS + L+ +A R+ + Y + M + + D + + F H
Sbjct: 289 RKGCAPDSVTYGTLVSAFCKAGRLSQG-YEFLDAMSRDALRVDPGVY---LGFFVAHEKK 344
Query: 395 EKAFHVLEEMNKLEHCK--PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
E+ LE M ++ C+ P++ ++ +L+ K G+T + ++ L ++M N LS +
Sbjct: 345 EQLEECLELMERMRECRCPPDLGIYNVVLRLSCKLGETKQAMA-LWNEMENS-GLSPGVD 402
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMIGHD--ITPRYQTCRLILDEVKQKHMYDAAEKI 508
T+ ++++GL A FK+M+G + P+Y + +L+ + + + A+ +
Sbjct: 403 TFAIMVNGLVGQGSLVDACSFFKDMVGRGLFVAPQYGVLKDLLNALVRDEKLELAKDV 460
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 128/321 (39%), Gaps = 45/321 (14%)
Query: 146 KVRQMDQMRALLEEMSKG----HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEK 201
++ ++D+ + +L M +V NT+ + F A ++EDA
Sbjct: 203 RLGKLDEAKHVLARMKAAGVAPDVVVFNTL---LAGFVAADRFEDA-------------- 245
Query: 202 NTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQ 261
ELAR +E + C PPNA ++ + G RVDE
Sbjct: 246 -----------------FELARE--MERRDC-PPNAVSYTTLMQGLGSRGRVDEVMRVFV 285
Query: 262 EMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSG 321
EM+ GC P ++Y T++ ++C+ S+ YE LD M + Y K
Sbjct: 286 EMRRKGCAPDSVTYGTLVSAFCKAGRLSQGYEFLDAMSRDALRVDPGVYLGFFVAHEKKE 345
Query: 322 DFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTF 381
EE + + E+M+ PD +N ++ + ++A+ ++ EM +G++P TF
Sbjct: 346 QLEECLELMERMRECRCPPDLGIYNVVLRLSCKLGETKQAMALWN-EMENSGLSPGVDTF 404
Query: 382 NTMITMFSHHGHHEKAFHVLEEM-NKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDD 440
M+ G A ++M + P LL + + K + L++ +
Sbjct: 405 AIMVNGLVGQGSLVDACSFFKDMVGRGLFVAPQYGVLKDLLNALVRDEKLE--LAKDVWG 462
Query: 441 MVNKHHLSLDITTYTLVIHGL 461
+ L++ +T+ IH L
Sbjct: 463 CIVSRGCELNVGAWTIWIHAL 483
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 171/381 (44%), Gaps = 18/381 (4%)
Query: 139 MMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTF 197
++++ + ++D A+L EM +GH T +++ + +A ++
Sbjct: 132 ILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRM 191
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-------CIPPNAHTFNIFIHGWCKI 250
G N T LL+ LC G LA + E+ + I PN + I CK
Sbjct: 192 GYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKD 251
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
+D+ + EMKG G P V++YS+II C + L +EM +G PNVVT+
Sbjct: 252 GLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTF 311
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
++ L K+G EEA + + M G PD+ +N LI R+ +A ++ V M
Sbjct: 312 NVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLF-VSME 370
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCK---PNVQTFHPLLKSCFKT 427
G+ D ++N +I + G +A + EM CK P V T++ LL F+
Sbjct: 371 SKGIETDAVSYNVLINGYCKSGRMVEAKKLYREM----MCKEIMPTVITYNTLLTGLFRE 426
Query: 428 GKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
GK + + L +M H L+ + TY +++ GLC+ N A LF + HD P Q
Sbjct: 427 GKVRDAWN-LFGEM-KVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQ 484
Query: 488 TCRLILDEVKQKHMYDAAEKI 508
++D + + + A ++
Sbjct: 485 IFNCLIDGLCKARKIEIAREL 505
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 178/371 (47%), Gaps = 12/371 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIA--KVMRRFSGAGQWEDAVRTFDEL 194
Y ++D L K +D+ + L EM KG ++ + +A ++ G+WE A F+E+
Sbjct: 241 YCTIIDSLCKDGLIDKGKELFLEM-KGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEM 299
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRV 253
G+ N T N+L+D LCK GK+E A + L ++ P+ T+N I G+C R+
Sbjct: 300 VDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRI 359
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
D+A+ M+ G +SY+ +I YC+ + +L EM + P V+TY T+
Sbjct: 360 DDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTL 419
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
++ L + G +A + +MK+ P+S +N L+ L + + + EA+ ++ + +
Sbjct: 420 LTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHY-LENHD 478
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH--CKPNVQTFHPLLKSCFKTGKTD 431
P FN +I E A E N+L H +PNV T+ ++ K+G+ +
Sbjct: 479 FQPSIQIFNCLIDGLCKARKIEIA---RELFNRLSHEGLEPNVITYTVMIHGLCKSGQLE 535
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRL 491
L + + + ++ T+ ++ G C+ ++ + L +EM D +P T +
Sbjct: 536 NAKDLFLG--MEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISI 593
Query: 492 ILDEVKQKHMY 502
++D + + Y
Sbjct: 594 VVDLLSKDEKY 604
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 174/382 (45%), Gaps = 54/382 (14%)
Query: 168 LNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFL 227
L +AK+ R F D + + + GL + T+N+L++ C KV+ +V
Sbjct: 99 LGAVAKIKRYF-------DVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLG 151
Query: 228 E-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYS---------- 276
E L+ PN TF + G C +R+ EA +++M G P V++Y
Sbjct: 152 EMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTG 211
Query: 277 -------------------------------TIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
TII S C+ K EL EM+ +G P
Sbjct: 212 NTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISP 271
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
+VV Y++++ + +G +E A + +M G P+ FN LI L +A +++EA ++
Sbjct: 272 DVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLL 331
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
++ M + G +PDT T+NT+I F G + A + M + + + +++ L+
Sbjct: 332 KL-MIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMES-KGIETDAVSYNVLINGYC 389
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
K+G+ E +L +M+ K + + TY ++ GL R K A+ LF EM HD+TP
Sbjct: 390 KSGRMVEA-KKLYREMMCKEIMP-TVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPE 447
Query: 486 YQTCRLILDEV-KQKHMYDAAE 506
T ++LD + K H+ +A E
Sbjct: 448 SCTYNILLDGLCKNNHLSEAME 469
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/429 (23%), Positives = 192/429 (44%), Gaps = 48/429 (11%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
G+ ++ + +V L ++ + LL +M + G+ + T ++ G A
Sbjct: 157 GHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLA 216
Query: 188 VRTFDEL----GTFG--LEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTF 240
V+ +E+ G FG ++ N ++D+LCK+G ++ + +FLE+K I P+ +
Sbjct: 217 VKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAY 276
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
+ IHG C R + A+ EM G HP V++++ +I + C+ + LL M
Sbjct: 277 SSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQ 336
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
+G P+ TY T++ G ++A + M+ G + D+ +N LI ++ R+ E
Sbjct: 337 RGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVE 396
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMN----KLEHC------ 410
A +Y+ EM + P T+NT++T G A+++ EM E C
Sbjct: 397 AKKLYR-EMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILL 455
Query: 411 ------------------------KPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHH 446
+P++Q F+ L+ K K + +++ L + ++
Sbjct: 456 DGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIE--IARELFNRLSHEG 513
Query: 447 LSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAE 506
L ++ TYT++IHGLC++ + E A LF M P T ++ Q D +
Sbjct: 514 LEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQN---DEMQ 570
Query: 507 KIEAVMKKL 515
K+ +++++
Sbjct: 571 KVVELLQEM 579
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 155/357 (43%), Gaps = 41/357 (11%)
Query: 82 EVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMV 141
E+F +K + + +++ + H + W+ A G+F G + + +++
Sbjct: 259 ELFLEMKGRGISPDVVAYSSIIHGMCHTGR--WEGAKGLFNEMVD-EGVHPNVVTFNVLI 315
Query: 142 DILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLE 200
D L K +M++ LL+ M +G T ++ F G+ +DA F + + G+E
Sbjct: 316 DALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIE 375
Query: 201 KNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIP------------------------ 234
+ + N+L++ CK G++ A+ ++ E+ K +P
Sbjct: 376 TDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNL 435
Query: 235 ----------PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCR 284
P + T+NI + G CK N + EA ++ H P + ++ +I C+
Sbjct: 436 FGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCK 495
Query: 285 QYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRF 344
EL + + +G PNV+TYT ++ L KSG E A + M+ G P+
Sbjct: 496 ARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVT 555
Query: 345 FNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVL 401
FN L+ + +Q+ V + Q EM E +PD ST + ++ + S + + H+L
Sbjct: 556 FNTLMRGFCQNDEMQKVVELLQ-EMAEKDFSPDASTISIVVDLLSKDEKYREYLHLL 611
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 123/312 (39%), Gaps = 46/312 (14%)
Query: 209 LLDTLCKEGKVEL--ARSVFLELKSCIP-PNAHTFNIFIHGWCKINRVDEAQWTIQEMKG 265
L + CK G ++ A SVF L P P +FN + KI R + + M
Sbjct: 61 FLKSNCKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSL 120
Query: 266 HGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEE 325
G P I+ + +I YC +L EM +G PN VT+T+++ L E
Sbjct: 121 IGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISE 180
Query: 326 AIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ------------------- 366
A + KM +G +P+ + L+ L AV +++
Sbjct: 181 ATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVC 240
Query: 367 ---------------------VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMN 405
+EM G++PD ++++I H G E A + EM
Sbjct: 241 YCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMV 300
Query: 406 KLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRAN 465
E PNV TF+ L+ + K GK +E + LL M+ + S D TY +I G C
Sbjct: 301 D-EGVHPNVVTFNVLIDALCKAGKMEEA-NHLLKLMIQRGE-SPDTFTYNTLIDGFCLEG 357
Query: 466 KCEWAYLLFKEM 477
+ + A LF M
Sbjct: 358 RIDDARDLFVSM 369
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 60/124 (48%), Gaps = 3/124 (2%)
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFL--ELKSCIPPNAH 238
A + E A F+ L GLE N T +++ LCK G++E A+ +FL E K C PN
Sbjct: 496 ARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGC-APNLV 554
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
TFN + G+C+ + + + +QEM P + S ++ + + + LL
Sbjct: 555 TFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYREYLHLLPTF 614
Query: 299 QAQG 302
AQG
Sbjct: 615 PAQG 618
>gi|125555763|gb|EAZ01369.1| hypothetical protein OsI_23402 [Oryza sativa Indica Group]
Length = 619
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 148/300 (49%), Gaps = 11/300 (3%)
Query: 189 RTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK--SCIPPNAHTFNIFIHG 246
R F++L N T N+++D LCKEG++ ARS+F +K C+P + TFN I G
Sbjct: 178 RLFEQLPA----PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLP-DVVTFNSLIDG 232
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
+ K +DE + ++EM+ GC V++Y+ +I +C+ Y M+ +G N
Sbjct: 233 YGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMAN 292
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
VVT++T + K G EA+++ +M++ G + + CLI +A R+ +A+ +
Sbjct: 293 VVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLD 352
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
EM GV + T+ ++ +A VL M K + N + L+ F
Sbjct: 353 -EMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEK-AGVRANELLYTTLIHGHFM 410
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
+++ L LL +M NK L LDI+ Y +I GLC +K + A L +M + P Y
Sbjct: 411 NKNSEKALG-LLSEMKNK-GLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNY 468
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 170/405 (41%), Gaps = 59/405 (14%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
+ +++D L K ++ + R+L M + G + + T ++ + G+ ++ + +E+
Sbjct: 191 FNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMR 250
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVD 254
G + + T N L++ CK G++E A F +K + N TF+ F+ +CK V
Sbjct: 251 RSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVR 310
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA +M+ G +Y+ +I C+ LLDEM QG P NVVTYT ++
Sbjct: 311 EAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLV 370
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
L K EA + M+ G + + + LI+ ++A+ + EM G+
Sbjct: 371 DGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLS-EMKNKGL 429
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
D S + +I + ++A +L +M++ +PN + ++ +CFK+GK E +
Sbjct: 430 ELDISLYGALIQGLCNVHKLDEAKSLLTKMDE-SGLEPNYIIYTTMMDACFKSGKVPEAI 488
Query: 435 S---------------------QLLDDMVNK----------------------------- 444
+ QL ++MV+K
Sbjct: 489 AMLQKILDSGFQPNNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALK 548
Query: 445 -----HHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
L LD+ YT I G C N A +F EMIGH I P
Sbjct: 549 AKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAP 593
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 119/262 (45%), Gaps = 8/262 (3%)
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
+D+A + ++ P + + I+ R + V L +++ A PNV T+
Sbjct: 138 LDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPA----PNVFTFNI 193
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN 372
V+ +L K G+ EA + +MK +G PD FN LI G+ + E + + EM +
Sbjct: 194 VIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVE-EMRRS 252
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
G D T+N +I F G E A+ M + E NV TF + + K G E
Sbjct: 253 GCKADVVTYNALINCFCKFGRMETAYGYFAAMKR-EGVMANVVTFSTFVDAFCKEGLVRE 311
Query: 433 CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLI 492
+ L + ++L+ TYT +I G C+A + + A +L EM+ + T ++
Sbjct: 312 AMK--LFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVL 369
Query: 493 LDEVKQKHMYDAAEKIEAVMKK 514
+D + ++ AE + +M+K
Sbjct: 370 VDGLCKERKVAEAEDVLRMMEK 391
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 94/238 (39%), Gaps = 26/238 (10%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVM--RRFSGAGQWEDAVRTFDEL 194
Y ++VD L K R++ + +L M K + + + F E A+ E+
Sbjct: 366 YTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNS-EKALGLLSEM 424
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRV 253
GLE + L+ LC K++ A+S+ ++ +S + PN + + K +V
Sbjct: 425 KNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKV 484
Query: 254 DEAQWTIQEMKGHGCHP---CV-------------------ISYSTIIQSYCRQYNFSKV 291
EA +Q++ G P C+ + Y+ ++ Y +Q N
Sbjct: 485 PEAIAMLQKILDSGFQPNNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDA 544
Query: 292 YELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
+ L +M G ++ YT +S EA + +M G PD +NCLI
Sbjct: 545 FALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLI 602
>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
Length = 1035
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 118/496 (23%), Positives = 226/496 (45%), Gaps = 44/496 (8%)
Query: 48 GARLDH---HQVL--CVDSPRLPD-IDVIISKV-HVGSSEDEVFQSLKQDHVCNAIQPSH 100
G R+DH +Q+L D R+ + +DV++ ++ +G D V ++ +CN +
Sbjct: 124 GWRMDHIVINQLLNGLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEE 183
Query: 101 YLVNKLIHRFKDD--WKSALGIFRWAGSCPGYEHSSEI---------------------Y 137
L +L+H DD W + ++ G+ ++ Y
Sbjct: 184 AL--ELLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTY 241
Query: 138 EMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGT 196
++D L K + D+ A+ ++M G ++T ++ + G+W++ VR +E+
Sbjct: 242 TTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSA 301
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDE 255
G + N T LL+ LCK G+ AR F + I P+ T+ I +HG+ + E
Sbjct: 302 GGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSE 361
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
+ M +G P ++ +Y + K ++ ++M+ QG P+ V+Y ++
Sbjct: 362 MHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALID 421
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIY---TLGRASRVQEAVYVYQVEMPEN 372
L K G ++A +M G PD F+ L+Y T+ + +V+E + EM
Sbjct: 422 ALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFF----EMLNV 477
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
G+ P+ FNT++ G + +++ + + +P+V +++ L+ G DE
Sbjct: 478 GIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECM-GVRPDVISYNTLIDGHCLAGTIDE 536
Query: 433 CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLI 492
S+LL+ MV+ L D +Y ++HG C+A + + AY F++M+ + ITP T I
Sbjct: 537 A-SKLLEGMVSV-GLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTI 594
Query: 493 LDEVKQKHMYDAAEKI 508
L + Q + A+++
Sbjct: 595 LHGLFQTKRFSEAKEL 610
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 191/389 (49%), Gaps = 8/389 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVM-RRFSGAGQWEDA 187
G + S Y +M+ + +M LL M I + I + ++ G + A
Sbjct: 338 GIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKA 397
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHG 246
+ F+++ GL + + L+D LCK G+V+ A F ++ + P+ F+ ++G
Sbjct: 398 MDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYG 457
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C +++ ++ + EM G HP ++ ++TI+ + C++ + L+D ++ G P+
Sbjct: 458 LCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPD 517
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
V++Y T++ +G +EA ++ E M VG KPDS +N L++ +A R+ A Y +
Sbjct: 518 VISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSA-YSHF 576
Query: 367 VEMPENGVAPDTSTFNTMI-TMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
+M NG+ P T+NT++ +F E L +N K ++ T++ +L
Sbjct: 577 RKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMIN--SGTKWDIYTYNIILNGLC 634
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
K+ DE + ++ ++ +K L L+I T+ ++I L + + E A LF + + +
Sbjct: 635 KSNCVDEAI-KMFQNLCSK-GLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQN 692
Query: 486 YQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
T RL+++ + ++ + + + + M+K
Sbjct: 693 VVTYRLVVENLIEEGSLEEFDSLFSAMEK 721
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 114/476 (23%), Positives = 210/476 (44%), Gaps = 47/476 (9%)
Query: 41 IESYCSDGARLDHHQV---LCVDSPRLPDIDVIISKVHVGSSED--EVFQSLKQDHVCNA 95
I++ C G R+D +V ++ PDI V S V+ + D E + L + +
Sbjct: 420 IDALCKLG-RVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVG 478
Query: 96 IQPSHYLVNKLIHRFKDDWKSALGIFRWAGS--CPGYEHSSEIYEMMVDILGKVRQMDQM 153
I P+ N ++ + + G R S C G Y ++D +D+
Sbjct: 479 IHPNIVFFNTILCNLCKEGRVMEGQ-RLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEA 537
Query: 154 RALLEEMS----KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLL 209
LLE M K + NT+ + + AG+ + A F ++ + G+ T N +
Sbjct: 538 SKLLEGMVSVGLKPDSFSYNTL---LHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTI 594
Query: 210 LDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGC 268
L L + + A+ ++L + S + +T+NI ++G CK N VDEA Q + G
Sbjct: 595 LHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGL 654
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
+I+++ +I + + +L + A G NVVTY V+ L + G EE
Sbjct: 655 QLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDS 714
Query: 329 ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF 388
+ M+ G+ P+S+ N L+ L + A Y ++ E + + ST + +I++F
Sbjct: 715 LFSAMEKNGTAPNSQMLNALVRRLLHRGDISRA-GAYLSKLDERNFSVEASTTSMLISIF 773
Query: 389 S--HHGHHEKA----FHVLEEMNK---------------------LEHCKPNVQTFHPLL 421
S + HH K+ + +L E N ++ P+V T++ +L
Sbjct: 774 SSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTIL 833
Query: 422 KSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
F+TG+ E +L M+N ++I TY ++++GLC++N + A+ +F+ +
Sbjct: 834 HGLFQTGRFSEA-KELYLSMINSRT-QMNIYTYNIILNGLCKSNCVDEAFKMFQSL 887
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 154/346 (44%), Gaps = 19/346 (5%)
Query: 69 VIISKVHVGSSE--DEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGS 126
V+ + + GS E D +F +++++ Q + LV +L+HR D A G +
Sbjct: 699 VVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHR--GDISRA-GAYLSKLD 755
Query: 127 CPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWED 186
+ + M++ I ++L ++ + + + K RR +D
Sbjct: 756 ERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRI------DD 809
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIH 245
A F E+ GL + T N +L L + G+ A+ ++L + S N +T+NI ++
Sbjct: 810 AYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILN 869
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G CK N VDEA Q + G +I+++ +I + + +L + A G P
Sbjct: 870 GLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVP 929
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
+VVTY V L + G EE + M+ G+ DSR N L+ L + + A Y
Sbjct: 930 DVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRA-GAY 988
Query: 366 QVEMPENGVAPDTSTFNTMITMFSH--HGHHEKA----FHVLEEMN 405
++ E + + ST + +I++FS + HH K+ + +L E N
Sbjct: 989 LSKLDEKNFSLEASTTSELISLFSRGEYQHHAKSLPEKYRLLNEAN 1034
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 88/186 (47%), Gaps = 4/186 (2%)
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
PN TY+ ++ + G E + G + D N L+ L RV EA+ V
Sbjct: 92 PNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDV 151
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM--NKLEHCKPNVQTFHPLLK 422
MPE G PDT ++N ++ + E+A +L M +++ C PNV ++ ++
Sbjct: 152 LLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVIN 211
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
F G+ D+ + L+ M + D+ TYT VI GLC+A + A +F++MI + +
Sbjct: 212 GFFTEGQVDKPYNLFLEMM--DRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGV 269
Query: 483 TPRYQT 488
P T
Sbjct: 270 KPNIDT 275
>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Vitis vinifera]
Length = 718
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 184/393 (46%), Gaps = 20/393 (5%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS 161
L +++ F+ + AL +FRWA S PG+ S ++ +++IL + M ++E +
Sbjct: 83 LFVRVLSSFRTSPRMALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVI 142
Query: 162 KGHI---------------VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETM 206
++ V++ + ++ +S E + FD++ L + +
Sbjct: 143 NANMHRIVDVLIGGCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNC 202
Query: 207 NLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKG 265
N +L L + + A V+ + I P T+N + +CK +V + + EM+
Sbjct: 203 NRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQR 262
Query: 266 HGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEE 325
GC P ++Y+ +I ++ F + L+ EM G + TY ++ G E
Sbjct: 263 RGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAE 322
Query: 326 AIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMI 385
A+ + E+M + G+ P +N IY L + R+ +A+ +M N + PD ++NT+I
Sbjct: 323 ALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLS-DMLANNLLPDVVSYNTLI 381
Query: 386 TMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKH 445
+ G+ KAF + +E+ + + P + T++ LL + G+ E QL +M+N+
Sbjct: 382 YGYCRLGNLMKAFLLFDELRSI-YLFPTIVTYNTLLDGLCRQGEL-EVAQQLKVEMINE- 438
Query: 446 HLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
++ DI TYT++++G C+ A F EM+
Sbjct: 439 GIAPDIVTYTILVNGSCKMGSLSMAQEFFDEML 471
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 128/488 (26%), Positives = 225/488 (46%), Gaps = 29/488 (5%)
Query: 41 IESYCSDGARLDHHQVLCVDSPR--LPDIDVIISKVHVGSSEDEVFQSLKQ---DHVCNA 95
++SYC G +L R P+ DV + + G S+ F+ K + +
Sbjct: 241 LDSYCKGGKVQQGLDLLSEMQRRGCAPN-DVTYNVLINGLSKKGEFEQAKGLIGEMLKTG 299
Query: 96 IQPSHYLVNKLIHRF--KDDWKSALGI---FRWAGSCPGYE-HSSEIYEMMVDILGKVRQ 149
++ S Y N LI+ + K AL + G+ P ++S IY + LG++
Sbjct: 300 LKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCK--LGRMSD 357
Query: 150 -MDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNL 208
M Q+ +L +V+ NT+ + + G A FDEL + L T N
Sbjct: 358 AMQQLSDMLANNLLPDVVSYNTL---IYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNT 414
Query: 209 LLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG 267
LLD LC++G++E+A+ + +E+ I P+ T+ I ++G CK+ + AQ EM G
Sbjct: 415 LLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEG 474
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
+Y+T I + + S+ + L +EM A+G PP+++ Y V+ L K G+ EEA
Sbjct: 475 LELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEAS 534
Query: 328 RITEKMKIVGSKPDSRFFNCLIYT---LGRASRVQEAVYVYQVEMPENGVAPDTSTFNTM 384
+ +KM G PD + +I+ GR + +E Y EM G+ P T+ +
Sbjct: 535 ELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFY----EMLSKGLTPSVVTYTVL 590
Query: 385 ITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK 444
I + G E+AF EM + + PNV T++ L+ K + D+ + +MV K
Sbjct: 591 IHGHAGKGRLERAFIYFSEMQE-KGILPNVITYNSLINGLCKVRRMDQAYN-FFAEMVEK 648
Query: 445 HHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDA 504
+ +YT++I+ C + A L+K+M+ + P T +L ++ + A
Sbjct: 649 GIFP-NKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQA 707
Query: 505 AEKIEAVM 512
++E+++
Sbjct: 708 VRQLESLL 715
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 184/396 (46%), Gaps = 21/396 (5%)
Query: 107 IHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK---- 162
I R KD A+ ++R G G + + Y ++D K ++ Q LL EM +
Sbjct: 208 ILRDKDLMSKAVEVYRTMGEF-GIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCA 266
Query: 163 GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELA 222
+ VT N + + S G++E A E+ GL+ + T N L+ +G + A
Sbjct: 267 PNDVTYNVL---INGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEA 323
Query: 223 RSVFLE--LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQ 280
S+ E LK P T+N FI+G CK+ R+ +A + +M + P V+SY+T+I
Sbjct: 324 LSLQEEMVLKGA-SPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIY 382
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
YCR N K + L DE+++ P +VTY T++ L + G+ E A ++ +M G P
Sbjct: 383 GYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAP 442
Query: 341 DSRFFNCLIY---TLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKA 397
D + L+ +G S QE + EM G+ D+ + T I G +A
Sbjct: 443 DIVTYTILVNGSCKMGSLSMAQE----FFDEMLHEGLELDSYAYATRIVGELKLGDTSRA 498
Query: 398 FHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLV 457
F + EEM + P++ ++ ++ K G +E S+LL MV+ + D TYT +
Sbjct: 499 FSLQEEMLA-KGFPPDLIIYNVVVDGLCKLGNLEEA-SELLQKMVSDGVIP-DYVTYTSI 555
Query: 458 IHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
IH + +F EM+ +TP T +++
Sbjct: 556 IHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLI 591
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 150/341 (43%), Gaps = 49/341 (14%)
Query: 143 ILGKVRQMDQMRALL--EEMSKGH----IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGT 196
I G R + M+A L +E+ + IVT NT+ + R G+ E A + E+
Sbjct: 381 IYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCR---QGELEVAQQLKVEMIN 437
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVF-------LELKS------------------ 231
G+ + T +L++ CK G + +A+ F LEL S
Sbjct: 438 EGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSR 497
Query: 232 -----------CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQ 280
PP+ +N+ + G CK+ ++EA +Q+M G P ++Y++II
Sbjct: 498 AFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIH 557
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
++ K E+ EM ++G P+VVTYT ++ A G E A +M+ G P
Sbjct: 558 AHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILP 617
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
+ +N LI L + R+ +A Y + EM E G+ P+ ++ +I + G+ ++A +
Sbjct: 618 NVITYNSLINGLCKVRRMDQA-YNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSL 676
Query: 401 LEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC--LSQLLD 439
++M +P+ T LLK K K L LLD
Sbjct: 677 YKQMLD-RGVQPDSCTHSALLKQLGKDCKLQAVRQLESLLD 716
>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Glycine max]
Length = 747
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 169/370 (45%), Gaps = 9/370 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQM-DQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G+E Y ++D K + D R L + + KG T ++ F G + A
Sbjct: 290 GFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRA 349
Query: 188 VRTF-DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFI 244
+ F D LG GL + N L+ L ++G + A + E+ C+P N T+N+ I
Sbjct: 350 MAVFKDGLGK-GLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLP-NIWTYNLVI 407
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
+G CK+ V +A + + GC P + +Y+T+I YC+Q E+++ M +QG
Sbjct: 408 NGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMT 467
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
P+V+TY T+++ L K+G EE + I + M+ G P+ +N ++ +L +A +V EAV +
Sbjct: 468 PDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDL 527
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
EM G+ PD +F T+ T F G + A+ + M K T++ ++ S
Sbjct: 528 LG-EMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYN-IIVSA 585
Query: 425 FKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
F +L M N D TY +VI G C+ Y E + P
Sbjct: 586 FSEQLNMNMAMKLFSVMKNS-GCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIP 644
Query: 485 RYQTCRLILD 494
T +L+
Sbjct: 645 SLTTFGRVLN 654
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 165/340 (48%), Gaps = 21/340 (6%)
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV-ELARSVFLELKSCIPPNAHT 239
+G+ + A FDE+ L + N L+ LCK+G V E R + LK + PN T
Sbjct: 194 SGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFT 253
Query: 240 FNIFIHGWCK---------INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSK 290
FNIF+ G C+ +RV EA+ +++M G P ++Y++II YC++
Sbjct: 254 FNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQD 313
Query: 291 VYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIY 350
+L + +G P+ TY ++++ K GD + A+ + + G +P +N LI
Sbjct: 314 ANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIK 373
Query: 351 TLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHC 410
L + + A+ + EM ENG P+ T+N +I G A H++++ + C
Sbjct: 374 GLSQQGLILPALQLMN-EMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDA-IAKGC 431
Query: 411 KPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK---HHLSLDITTYTLVIHGLCRANKC 467
P++ T++ L+ K K D +MVN+ ++ D+ TY +++GLC+A K
Sbjct: 432 PPDIFTYNTLIDGYCKQLKLDSA-----TEMVNRMWSQGMTPDVITYNTLLNGLCKAGKS 486
Query: 468 EWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAE 506
E +FK M TP T +I+D + K K + +A +
Sbjct: 487 EEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVD 526
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 86/388 (22%), Positives = 165/388 (42%), Gaps = 47/388 (12%)
Query: 107 IHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKG--H 164
+ + + D AL +F A S G++H++ Y+ +V LG + ++M LL EM + +
Sbjct: 13 VVKIQTDPLKALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMRENVNN 72
Query: 165 IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARS 224
+ + M+ + G+ ++AV TF+ + + + + + N +++ L + G A
Sbjct: 73 ALLEGAYIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHK 132
Query: 225 VFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCR 284
V++ M+ G V +Y+ I+S+C+
Sbjct: 133 VYMR----------------------------------MRDRGVQSDVYTYTIRIKSFCK 158
Query: 285 QYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRF 344
LL M GC N V Y TV++ L SG+ + A + ++M PD
Sbjct: 159 TARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVA 218
Query: 345 FNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
FN L++ L + V E+ + ++ + GV P+ TFN + G ++A +
Sbjct: 219 FNKLVHVLCKKGLVFESERLLG-KVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVV 277
Query: 405 NKLEHCK--------PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTL 456
E+ + P+ T++ ++ K G + +++L D V K D TY
Sbjct: 278 EAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDA-NRVLKDAVFK-GFKPDEFTYCS 335
Query: 457 VIHGLCRANKCEWAYLLFKEMIGHDITP 484
+I+G C+ + A +FK+ +G + P
Sbjct: 336 LINGFCKDGDPDRAMAVFKDGLGKGLRP 363
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 100/244 (40%), Gaps = 38/244 (15%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++D K ++D ++ M S+G + T ++ AG+ E+ + F +
Sbjct: 438 YNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAME 497
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVD 254
G N T N+++D+LCK KV A + E+KS + P+ +F G+CKI +D
Sbjct: 498 EKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDID 557
Query: 255 ---------EAQWTI---------------------------QEMKGHGCHPCVISYSTI 278
E Q+ + MK GC P +Y +
Sbjct: 558 GAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVV 617
Query: 279 IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
I +C+ N ++ Y+ L E + P++ T+ V++ L EA+ I M G
Sbjct: 618 IDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGI 677
Query: 339 KPDS 342
P++
Sbjct: 678 VPET 681
>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 173/360 (48%), Gaps = 6/360 (1%)
Query: 127 CPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWED 186
C G Y++++D L K+++++ ++LL EM + N ++ G+ D
Sbjct: 270 CKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNAD 329
Query: 187 AVRTF-DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFI 244
A + E+ + G+ + + + KEG +E A+++F + S + P A + I
Sbjct: 330 AAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLI 389
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
G+C+ V + + EMK +Y T+++ C + Y ++ EM A GC
Sbjct: 390 EGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCR 449
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
PNVV YTT++ ++ F +A+R+ ++MK G PD +N LI L +A R+ EA
Sbjct: 450 PNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEA-RS 508
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
+ VEM ENG+ P+ T+ I+ + A ++EM + PN L+
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMREC-GVLPNKVLCTGLINEY 567
Query: 425 FKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
K K E S MV++ L D TYT++++GL + +K + A +F+EM G I P
Sbjct: 568 CKKEKVIEACSA-YRSMVDQGILG-DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAP 625
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 156/326 (47%), Gaps = 17/326 (5%)
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIH 245
A R+ + G G + +T +L++ L K KV+ A +F E++ I P+ ++ + I+
Sbjct: 579 AYRSMVDQGILG---DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLIN 635
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G+ K+ + +A EM G P VI Y+ ++ +CR K ELLDEM +G P
Sbjct: 636 GFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHP 695
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N VTY T++ KSGD EA R+ ++MK+ G PDS + L+ R + V+ A+ ++
Sbjct: 696 NAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF 755
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKL------EHCKPNVQTFHP 419
+ G A T+ FN +I G E VL N+L KPN T++
Sbjct: 756 GTN--KKGCASSTAPFNALINWVFKFGKTELKTEVL---NRLMDGSFDRFGKPNDVTYNI 810
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
++ K G E +L M N +L + TYT +++G + + + +F E I
Sbjct: 811 MIDYLCKEGNL-EAAKELFHQMQN-ANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIA 868
Query: 480 HDITPRYQTCRLILDEVKQKHMYDAA 505
I P + +I++ ++ M A
Sbjct: 869 AGIEPDHIMYSVIINAFLKEGMTTKA 894
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 173/363 (47%), Gaps = 9/363 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ L K ++MD+ R+ L EM G T + + A ++ A + E+
Sbjct: 490 YNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMR 549
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
G+ N L++ CK+ KV A S + + I +A T+ + ++G K ++VD
Sbjct: 550 ECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVD 609
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
+A+ +EM+G G P V SY +I + + N K + DEM +G PNV+ Y ++
Sbjct: 610 DAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLL 669
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
+SG+ E+A + ++M + G P++ + +I ++ + EA ++ EM G+
Sbjct: 670 GGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFD-EMKLKGL 728
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD--- 431
PD+ + T++ E+A + K C + F+ L+ FK GKT+
Sbjct: 729 VPDSFVYTTLVDGCCRLNDVERAITIFGTNKK--GCASSTAPFNALINWVFKFGKTELKT 786
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRL 491
E L++L+D ++ D+ TY ++I LC+ E A LF +M ++ P T
Sbjct: 787 EVLNRLMDGSFDRFGKPNDV-TYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTS 845
Query: 492 ILD 494
+L+
Sbjct: 846 LLN 848
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 146/328 (44%), Gaps = 26/328 (7%)
Query: 202 NTETMNLLLDTLCKEGKVELARSVF-----------------LELKSC-----IPPNAHT 239
+ +T ++L+ C+ G V+L + V L+LK + P +T
Sbjct: 220 DVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYT 279
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+++ I G CKI R+++A+ + EM G +YS +I + N L+ EM
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMV 339
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
+ G Y + ++K G E+A + + M G P ++ + LI R V+
Sbjct: 340 SHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVR 399
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
+ Y VEM + + T+ T++ G + A+++++EM C+PNV +
Sbjct: 400 QG-YELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIA-SGCRPNVVIYTT 457
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
L+K+ + + + + ++L +M + ++ DI Y +I GL +A + + A EM+
Sbjct: 458 LIKTFLQNSRFGDAM-RVLKEM-KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVE 515
Query: 480 HDITPRYQTCRLILDEVKQKHMYDAAEK 507
+ + P T + + + +A+K
Sbjct: 516 NGLKPNAFTYGAFISGYIEASEFASADK 543
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 154/367 (41%), Gaps = 24/367 (6%)
Query: 81 DEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSC------PGYEHSS 134
+E+F+ ++ I P + LI+ F S LG + A S G +
Sbjct: 612 EEIFREMRG----KGIAPDVFSYGVLINGF-----SKLGNMQKASSIFDEMVEEGLTPNV 662
Query: 135 EIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDE 193
IY M++ + ++++ + LL+EMS KG T ++ + +G +A R FDE
Sbjct: 663 IIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDE 722
Query: 194 LGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRV 253
+ GL ++ L+D C+ VE A ++F K + FN I+ K +
Sbjct: 723 MKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKT 782
Query: 254 DEAQWTIQEMKGHG----CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
+ + + P ++Y+ +I C++ N EL +MQ P V+T
Sbjct: 783 ELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVIT 842
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM 369
YT++++ K G E + ++ G +PD ++ +I + +A+ +
Sbjct: 843 YTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMF 902
Query: 370 PEN----GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
+N G ST +++ F+ G E A V+E M +L++ + + +SC
Sbjct: 903 AKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCI 962
Query: 426 KTGKTDE 432
+ + E
Sbjct: 963 SSNQRVE 969
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 86/429 (20%), Positives = 152/429 (35%), Gaps = 49/429 (11%)
Query: 112 DDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTI 171
DD L F W S E + + + L ++ +++E M
Sbjct: 75 DDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERM----------- 123
Query: 172 AKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF----- 226
+ R + A W VR E G + +L D +G +E A VF
Sbjct: 124 --IERNWPVAEVWSSIVRCSQEF--VGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMG 179
Query: 227 LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQ- 285
LEL P + + + NR+D + M V +Y +I ++CR
Sbjct: 180 LEL----VPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAG 235
Query: 286 --------------------YNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEE 325
N +L + M +G P TY ++ L K E+
Sbjct: 236 NVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLED 295
Query: 326 AIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMI 385
A + +M +G D+ ++ LI L + A + EM +G+ ++ I
Sbjct: 296 AKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVH-EMVSHGINIKPYMYDCCI 354
Query: 386 TMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKH 445
+ S G EKA + + M P Q + L++ + + L++ + K
Sbjct: 355 CVMSKEGVMEKAKALFDGMIA-SGLIPQAQAYASLIEGYCREKNVRQGYELLVE--MKKR 411
Query: 446 HLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
++ + TY V+ G+C + + AY + KEMI P ++ Q + A
Sbjct: 412 NIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDA 471
Query: 506 EKIEAVMKK 514
++ MK+
Sbjct: 472 MRVLKEMKE 480
>gi|242048586|ref|XP_002462039.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
gi|241925416|gb|EER98560.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
Length = 798
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 162/335 (48%), Gaps = 9/335 (2%)
Query: 179 SGAGQWEDAVRTFDEL-GTFGLEKNTETMNLLLDTLCKEGKV-ELARSVFLEL--KSCIP 234
+ AG+ +AV F + G FG T N +L L G V LA +++ + C+P
Sbjct: 148 ASAGRHHEAVDAFSRMEGEFGCRPTTFVYNAVLRVLVASGGVVPLALALYNRMVAAGCLP 207
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYEL 294
N T+N+ + G CK +A EM G P V +++ ++ S C + L
Sbjct: 208 -NRATYNVLMDGLCKRGTAVDALKLFDEMLQRGITPNVKTHTILLSSMCNAGQLKEAENL 266
Query: 295 LDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS-KPDSRFFNCLIYTLG 353
L+ M+ +GCPP+ VTY +S L K+G +EAI E ++ G+ + ++CLI L
Sbjct: 267 LNSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRRTGTFVLGLKGYSCLIDGLF 326
Query: 354 RASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPN 413
A R +E Y + + +PD + MI + G + AF +EM K + P+
Sbjct: 327 LAGRYEEGFQCYMEVLEQADFSPDIVLYTIMIRGCAEAGRIDDAFAFFDEM-KEKRFTPD 385
Query: 414 VQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLL 473
++ LLK+ +G D S L+ +M ++++ LD T+T++IHGLC+ + A +
Sbjct: 386 TFCYNTLLKALCDSGDLDGARS-LMSEMA-QNNVVLDTNTHTIMIHGLCKKQLVDEAMQV 443
Query: 474 FKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
F M+ P T +++D + + H + A +
Sbjct: 444 FDGMVEVGCHPTVMTYNVLIDGLYRAHRLEEARML 478
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 171/388 (44%), Gaps = 72/388 (18%)
Query: 156 LLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK 215
+LE+ + L TI ++R + AG+ +DA FDE+ +T N LL LC
Sbjct: 341 VLEQADFSPDIVLYTI--MIRGCAEAGRIDDAFAFFDEMKEKRFTPDTFCYNTLLKALCD 398
Query: 216 EGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVIS 274
G ++ ARS+ E+ ++ + + +T I IHG CK VDEA M GCHP V++
Sbjct: 399 SGDLDGARSLMSEMAQNNVVLDTNTHTIMIHGLCKKQLVDEAMQVFDGMVEVGCHPTVMT 458
Query: 275 YSTIIQ------------------------------------------------SYCRQY 286
Y+ +I S C+
Sbjct: 459 YNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVKDSESLQKLVDSMCQSG 518
Query: 287 NFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFN 346
K Y+LL + G P+VVTY T+++ L K + + A+R+ ++++ G D +
Sbjct: 519 QVLKAYKLLRGIMDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFSLDEITYG 578
Query: 347 CLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF-----HVL 401
LI +L RA R +A+ ++Q ++ G P S +N+++ +A H+L
Sbjct: 579 TLIDSLLRAHRYNDAMTLFQ-DILHIGGTPSLSIYNSIMRSLCRMNKLSQAINFWFDHLL 637
Query: 402 EEMNKLEHCKPNVQTFHPLLKSC---FKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
+ K N+ ++ S F+ G DE + +L+ +++ + S++ YT+ +
Sbjct: 638 K--------KYNLSAQDEVIASARKKFEEGSLDEAVRELIK--IDQEYGSVNSCPYTIWL 687
Query: 459 HGLCRANKCEWAYLLFK--EMIGHDITP 484
GL +A + + A +F E G DITP
Sbjct: 688 IGLIQARRIDDALKIFHILEESGIDITP 715
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 160/399 (40%), Gaps = 54/399 (13%)
Query: 137 YEMMVDILGKV-RQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +++D L K +D ++ E + +G + T ++ AGQ ++A + +
Sbjct: 212 YNVLMDGLCKRGTAVDALKLFDEMLQRGITPNVKTHTILLSSMCNAGQLKEAENLLNSME 271
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELA----------RSVFLELK--SCI---------- 233
G + T N L LCK G+V+ A + L LK SC+
Sbjct: 272 DKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRRTGTFVLGLKGYSCLIDGLFLAGRY 331
Query: 234 ----------------PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
P+ + I I G + R+D+A EMK P Y+T
Sbjct: 332 EEGFQCYMEVLEQADFSPDIVLYTIMIRGCAEAGRIDDAFAFFDEMKEKRFTPDTFCYNT 391
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
++++ C + L+ EM + T+T ++ L K +EA+++ + M VG
Sbjct: 392 LLKALCDSGDLDGARSLMSEMAQNNVVLDTNTHTIMIHGLCKKQLVDEAMQVFDGMVEVG 451
Query: 338 SKPDSRFFNCLIYTLGRASRVQEA-VYVYQVEMPEN-----------GVAPDTSTFNTMI 385
P +N LI L RA R++EA + Y++E+ N D+ + ++
Sbjct: 452 CHPTVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVKDSESLQKLV 511
Query: 386 TMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKH 445
G KA+ +L + P+V T++ LL K D L + V
Sbjct: 512 DSMCQSGQVLKAYKLLRGIMD-SGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKG- 569
Query: 446 HLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
SLD TY +I L RA++ A LF++++ TP
Sbjct: 570 -FSLDEITYGTLIDSLLRAHRYNDAMTLFQDILHIGGTP 607
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 62/154 (40%), Gaps = 1/154 (0%)
Query: 355 ASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNV 414
A+ A+Y + G+ P + F +I + G H +A M C+P
Sbjct: 114 ATDADAAMYDAIADAQAAGLQPPAAAFEALIFAHASAGRHHEAVDAFSRMEGEFGCRPTT 173
Query: 415 QTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLF 474
++ +L+ +G L + MV L + TY +++ GLC+ A LF
Sbjct: 174 FVYNAVLRVLVASGGVVPLALALYNRMVAAGCLP-NRATYNVLMDGLCKRGTAVDALKLF 232
Query: 475 KEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
EM+ ITP +T ++L + AE +
Sbjct: 233 DEMLQRGITPNVKTHTILLSSMCNAGQLKEAENL 266
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 78/181 (43%), Gaps = 3/181 (1%)
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
+ G +P + F LI+ A R EAV + E G P T +N ++ + G
Sbjct: 129 QAAGLQPPAAAFEALIFAHASAGRHHEAVDAFSRMEGEFGCRPTTFVYNAVLRVLVASGG 188
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
L C PN T++ L+ K G + L +L D+M+ + ++ ++ T
Sbjct: 189 VVPLALALYNRMVAAGCLPNRATYNVLMDGLCKRGTAVDAL-KLFDEMLQR-GITPNVKT 246
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEAVM 512
+T+++ +C A + + A L M P T L + K + +A E++EA+
Sbjct: 247 HTILLSSMCNAGQLKEAENLLNSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALR 306
Query: 513 K 513
+
Sbjct: 307 R 307
>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 443
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 159/299 (53%), Gaps = 6/299 (2%)
Query: 144 LGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNT 203
+GK R+ ++ ++E+ G + + T ++ G+W DA + ++ G +
Sbjct: 132 IGKTRKATRIMEIIED--SGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSV 189
Query: 204 ETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQE 262
T N+L++ LC++G + A V ++ K PN+ ++N +HG+CK +++ A + +
Sbjct: 190 VTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGK 249
Query: 263 MKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGD 322
M GC+P +++Y+T++ + C+ ELL+++ ++GC P ++TY TV+ L+K G
Sbjct: 250 MTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGK 309
Query: 323 FEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFN 382
++A ++ ++M+ G KPD ++ L+ L R +V EA+ + ++ GV P+ T+N
Sbjct: 310 TDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFH-DLEVLGVKPNAITYN 368
Query: 383 TMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDM 441
++ ++A L M + CKP ++ L++ G E L +LL+++
Sbjct: 369 AIMLGLCKARKTDRAIDFLAYMVQ-RGCKPTEASYTILIEGLAYEGLAKEAL-ELLNEL 425
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 161/335 (48%), Gaps = 14/335 (4%)
Query: 149 QMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN 207
++++ LE M +G I + ++R F G+ A R + + G + T N
Sbjct: 99 ELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYN 158
Query: 208 LLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKG 265
+L+ +C G+ A + ++ + C P+ TFNI I+ C+ + A +++M
Sbjct: 159 VLISGMCSTGRWMDAEKLLADMVRRGC-SPSVVTFNILINFLCRKGLLGRAIDVLEKMPK 217
Query: 266 HGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEE 325
HGC P +SY+ ++ +C++ + E L +M ++GC P++VTY T+++ L K G +
Sbjct: 218 HGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDA 277
Query: 326 AIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMI 385
A+ + ++ G P +N +I L + + +A + EM G+ PD T+++++
Sbjct: 278 AVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLD-EMRAKGLKPDIITYSSLV 336
Query: 386 TMFSHHGHHEKA---FHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMV 442
S G ++A FH LE + KPN T++ ++ K KTD + L MV
Sbjct: 337 GGLSREGKVDEAIKFFHDLEVLG----VKPNAITYNAIMLGLCKARKTDRAI-DFLAYMV 391
Query: 443 NKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
+ + +YT++I GL + A L E+
Sbjct: 392 QRGCKPTE-ASYTILIEGLAYEGLAKEALELLNEL 425
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 138/270 (51%), Gaps = 4/270 (1%)
Query: 243 FIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
I G+CKI + +A ++ ++ G P VI+Y+ +I C + +LL +M +G
Sbjct: 125 LIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRG 184
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
C P+VVT+ ++++L + G AI + EKM G P+S +N L++ + +++ A+
Sbjct: 185 CSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAI 244
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLK 422
Y +M G PD T+NT++T G + A +L +++ + C P + T++ ++
Sbjct: 245 E-YLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSS-KGCSPVLITYNTVID 302
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
K GKTD+ ++LLD+M K L DI TY+ ++ GL R K + A F ++ +
Sbjct: 303 GLSKVGKTDQA-AKLLDEMRAK-GLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGV 360
Query: 483 TPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
P T I+ + + D A A M
Sbjct: 361 KPNAITYNAIMLGLCKARKTDRAIDFLAYM 390
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 148/317 (46%), Gaps = 9/317 (2%)
Query: 169 NTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE 228
N ++K++R G+ E+ R + + G + L+ CK GK A +
Sbjct: 89 NNLSKLVRN----GELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEI 144
Query: 229 LK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYN 287
++ S P+ T+N+ I G C R +A+ + +M GC P V++++ +I CR+
Sbjct: 145 IEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGL 204
Query: 288 FSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNC 347
+ ++L++M GC PN ++Y ++ K E AI KM G PD +N
Sbjct: 205 LGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNT 264
Query: 348 LIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKL 407
L+ L + +V AV + ++ G +P T+NT+I S G ++A +L+EM +
Sbjct: 265 LLTALCKDGKVDAAVELLN-QLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEM-RA 322
Query: 408 EHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKC 467
+ KP++ T+ L+ + GK DE + D V + + TY ++ GLC+A K
Sbjct: 323 KGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEV--LGVKPNAITYNAIMLGLCKARKT 380
Query: 468 EWAYLLFKEMIGHDITP 484
+ A M+ P
Sbjct: 381 DRAIDFLAYMVQRGCKP 397
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 103/230 (44%), Gaps = 4/230 (1%)
Query: 279 IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
+ R + + L+ M +G P+++ T+++ K G +A RI E ++ G+
Sbjct: 91 LSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGA 150
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
PD +N LI + R +A + +M G +P TFN +I G +A
Sbjct: 151 VPDVITYNVLISGMCSTGRWMDAEKLL-ADMVRRGCSPSVVTFNILINFLCRKGLLGRAI 209
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
VLE+M K C PN +++PLL K K + + + L M ++ DI TY ++
Sbjct: 210 DVLEKMPK-HGCTPNSLSYNPLLHGFCKEKKMERAI-EYLGKMTSRGCYP-DIVTYNTLL 266
Query: 459 HGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
LC+ K + A L ++ +P T ++D + + D A K+
Sbjct: 267 TALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKL 316
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 144/319 (45%), Gaps = 25/319 (7%)
Query: 35 IVSSSPIESYCSDGARLDHHQVLCV--DSPRLPDI---DVIISKV-HVGSSEDEVFQSLK 88
I +S I +C G +++ + DS +PD+ +V+IS + G D + L
Sbjct: 120 IPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDA--EKLL 177
Query: 89 QDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWA---GSCPGYEHSSEIYEMMVDI 143
D V PS N LI+ K A+ + G P +S Y ++
Sbjct: 178 ADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTP----NSLSYNPLLHG 233
Query: 144 LGKVRQMDQMRALLEEM-SKG---HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGL 199
K ++M++ L +M S+G IVT NT+ + + G+ + AV ++L + G
Sbjct: 234 FCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCK---DGKVDAAVELLNQLSSKGC 290
Query: 200 EKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQW 258
T N ++D L K GK + A + E+++ + P+ T++ + G + +VDEA
Sbjct: 291 SPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIK 350
Query: 259 TIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLA 318
+++ G P I+Y+ I+ C+ + + L M +GC P +YT ++ LA
Sbjct: 351 FFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLA 410
Query: 319 KSGDFEEAIRITEKMKIVG 337
G +EA+ + ++ + G
Sbjct: 411 YEGLAKEALELLNELCLRG 429
>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Brachypodium distachyon]
Length = 897
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/439 (23%), Positives = 195/439 (44%), Gaps = 44/439 (10%)
Query: 85 QSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSA--LGIFRWAGSCPGYEHSSEIYEMMVD 142
++L + C+ ++P+ + L+ F + K+A I S G + + +Y+ ++
Sbjct: 335 KALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISA-GVQPNKIMYDNLIR 393
Query: 143 ILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEK 201
L K+ Q+ + LL EM K GH T +M+ + A +E+ G+
Sbjct: 394 GLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILP 453
Query: 202 NTETMNLLLDTLCKEGKVELARSVFLEL-------------------------------- 229
N T ++++ LC+ G+ + A ++ E+
Sbjct: 454 NAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESL 513
Query: 230 ----KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQ 285
K+ + P+ +N I G + R++EA+ +++ G P +YS +I YC+
Sbjct: 514 ENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKT 573
Query: 286 YNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFF 345
N K +LL +M G PN TYT ++ KS D E+ I + M G KPD+ +
Sbjct: 574 RNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIY 633
Query: 346 NCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMN 405
+I L R+ + E ++ E+ +NG+ PD ++++I+ EKA +L+EM
Sbjct: 634 GIVIRNLSRSENM-EVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMA 692
Query: 406 KLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRAN 465
K E +P + ++ L+ ++G + D ++ K L + TYT +I G C+
Sbjct: 693 K-EGLEPGIVCYNALIDGFCRSGDISRA-RNVFDSILAKGLLP-NCVTYTALIDGNCKNG 749
Query: 466 KCEWAYLLFKEMIGHDITP 484
A+ L+K+M+ I P
Sbjct: 750 DITDAFDLYKDMLDRGIAP 768
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 169/385 (43%), Gaps = 41/385 (10%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +M+ L + +++ EEM G T +M G+ ++A DE+
Sbjct: 283 YNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMS 342
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVD 254
GL+ N L+D KEGK A + E+ S + PN ++ I G CKI ++
Sbjct: 343 CSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLG 402
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
A + EM G P +Y ++Q + + Y+ +ELL+EM+ G PN TY ++
Sbjct: 403 RASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMI 462
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRF------------------------------ 344
+ L ++G+ +EA + E+M G KP++
Sbjct: 463 NGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVL 522
Query: 345 -----FNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
+N LI L R++EA Y ++ + G+ PD T++ +I + + EKA
Sbjct: 523 PDLFCYNSLIKGLSTVGRIEEAEEYY-AQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQ 581
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIH 459
+L++M KPN T+ LL+ FK+ E +S +L M+ D Y +VI
Sbjct: 582 LLQQMLN-SGLKPNADTYTDLLEGYFKS-NDHEKVSSILQSMLGSGD-KPDNHIYGIVIR 638
Query: 460 GLCRANKCEWAYLLFKEMIGHDITP 484
L R+ E A+++ E+ + + P
Sbjct: 639 NLSRSENMEVAFMVLTEVEKNGLVP 663
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 157/387 (40%), Gaps = 74/387 (19%)
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVFLELK--SCIPPNAHTFNIFIHGWCKINRVDE 255
G+ + T + L+ CK + A+ VF E++ C N T+N+ I G C+ V+E
Sbjct: 240 GIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDC-AMNEVTYNVMISGLCRSGAVEE 298
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
A +EM +G P +Y ++ C+ + LLDEM G PNVV Y T++
Sbjct: 299 AFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVD 358
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFN------CLIYTLGRASRV----------- 358
K G EA I +M G +P+ ++ C I LGRAS++
Sbjct: 359 GFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRP 418
Query: 359 -----------------QEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVL 401
++ + EM +G+ P+ T+ MI +G ++A ++L
Sbjct: 419 DTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLL 478
Query: 402 EEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE------------------CLSQLLDDM-- 441
EEM E KPN + PL+ K G C + L+ +
Sbjct: 479 EEMIS-EGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLST 537
Query: 442 -------------VNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
V K L D TY+ +IHG C+ E A L ++M+ + P T
Sbjct: 538 VGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADT 597
Query: 489 CRLILDEVKQKHMYDAAEKIEAVMKKL 515
+L+ + + + EK+ ++++ +
Sbjct: 598 YTDLLEGYFKSNDH---EKVSSILQSM 621
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 167/360 (46%), Gaps = 7/360 (1%)
Query: 157 LEEMSKGHIVT-LNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK 215
LE M+K +++ L +++ S G+ E+A + ++ GL + T + L+ CK
Sbjct: 513 LENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCK 572
Query: 216 EGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVIS 274
+E A + + L S + PNA T+ + G+ K N ++ +Q M G G P
Sbjct: 573 TRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHI 632
Query: 275 YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
Y +I++ R N + +L E++ G P++ Y++++S L K D E+A+ + ++M
Sbjct: 633 YGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMA 692
Query: 335 IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHH 394
G +P +N LI R+ + A V+ + + G+ P+ T+ +I +G
Sbjct: 693 KEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAK-GLLPNCVTYTALIDGNCKNGDI 751
Query: 395 EKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTY 454
AF + ++M P+ ++ L C ++ L L ++M N+ + ++ +
Sbjct: 752 TDAFDLYKDMLD-RGIAPDAFVYNVLATGCSDAADLEQALF-LTEEMFNRGYAH--VSLF 807
Query: 455 TLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
+ ++ G C+ + + L M+ +I P QT ++ E + A ++ A +++
Sbjct: 808 STLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQ 867
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 136/289 (47%), Gaps = 11/289 (3%)
Query: 146 KVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTE 204
K R +++ LL++M + G +T ++ + + E + G + +
Sbjct: 572 KTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNH 631
Query: 205 TMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
+++ L + +E+A V E+ K+ + P+ H ++ I G CK+ +++A + EM
Sbjct: 632 IYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEM 691
Query: 264 KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF 323
G P ++ Y+ +I +CR + S+ + D + A+G PN VTYT ++ K+GD
Sbjct: 692 AKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDI 751
Query: 324 EEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNT 383
+A + + M G PD+ +N L A+ +++A+++ + EM G A S F+T
Sbjct: 752 TDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTE-EMFNRGYA-HVSLFST 809
Query: 384 MITMFSHHGH---HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
++ F G EK HV+ + PN QT ++ K GK
Sbjct: 810 LVRGFCKRGRLQETEKLLHVMMD----REIVPNAQTVENVITEFGKAGK 854
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 96/204 (47%), Gaps = 9/204 (4%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEMSK----GHIVTLNTIAKVMRRFSGAGQWEDAVRTF 191
IY ++ L K+ M++ LL+EM+K IV N + + F +G A F
Sbjct: 667 IYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNAL---IDGFCRSGDISRARNVF 723
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKI 250
D + GL N T L+D CK G + A ++ + L I P+A +N+ G
Sbjct: 724 DSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDA 783
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
+++A + +EM G + V +ST+++ +C++ + +LL M + PN T
Sbjct: 784 ADLEQALFLTEEMFNRG-YAHVSLFSTLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTV 842
Query: 311 TTVMSYLAKSGDFEEAIRITEKMK 334
V++ K+G EA R+ +++
Sbjct: 843 ENVITEFGKAGKLCEAHRVFAELQ 866
>gi|240256396|ref|NP_199195.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635652|sp|P0C8R0.1|PP416_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g43820
gi|332007631|gb|AED95014.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 546
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/413 (25%), Positives = 189/413 (45%), Gaps = 11/413 (2%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS 161
+V +++R ++ + F WA PG Y +++ LG+ + M +L+ M
Sbjct: 119 IVADVLNRGNLSGEAMVTFFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMV 178
Query: 162 -KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVE 220
+G L + M F A+ F+E +FG++ +TE+ N LL LC+ V
Sbjct: 179 CEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVS 238
Query: 221 LARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQ 280
A+SVF K IP ++ ++NI I GW K+ V+E + ++EM G P +SYS +I+
Sbjct: 239 AAKSVFNAKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIE 298
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
R + E+ D ++ +G P+ Y ++ + DF+E++R +M +P
Sbjct: 299 GLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEP 358
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
+ ++ L+ L + +V +A+ +++ EM GV P T + + +G A +
Sbjct: 359 NLETYSKLVSGLIKGRKVSDALEIFE-EMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVI 417
Query: 401 LEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHG 460
++ K C+ + + LLK + GK L + D+M + S D+ Y ++ G
Sbjct: 418 YQKSRK-AGCRISESAYKLLLKRLSRFGKCGMLL-NVWDEMQESGYPS-DVEVYEYIVDG 474
Query: 461 LCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
LC E A L+ +E + P R + + K M A+ K E K
Sbjct: 475 LCIIGHLENAVLVMEEAMRKGFCPN----RFVYSRLSSKLM--ASNKTELAYK 521
>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
Length = 687
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 148/300 (49%), Gaps = 11/300 (3%)
Query: 189 RTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK--SCIPPNAHTFNIFIHG 246
R F++L N T N+++D LCKEG++ ARS+F +K C+P + TFN I G
Sbjct: 178 RLFEQLPA----PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLP-DVVTFNSLIDG 232
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
+ K +DE + ++EM+ GC V++Y+ +I +C+ Y M+ +G N
Sbjct: 233 YGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMAN 292
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
VVT++T + K G EA+++ +M++ G + + CLI +A R+ +A+ +
Sbjct: 293 VVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLD 352
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
EM GV + T+ ++ +A VL M K + N + L+ F
Sbjct: 353 -EMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEK-AGVRANELLYTTLIHGHFM 410
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
+++ L LL +M NK L LDI+ Y +I GLC +K + A L +M + P Y
Sbjct: 411 NKNSEKALG-LLSEMKNK-GLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNY 468
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 179/377 (47%), Gaps = 19/377 (5%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
+ ++D GK ++D++ L+EEM K +VT N + +F G+ E A F
Sbjct: 226 FNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKF---GRMETAYGYFA 282
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKIN 251
+ G+ N T + +D CKEG V A +F +++ + N T+ I G CK
Sbjct: 283 AMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAG 342
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
R+D+A + EM G V++Y+ ++ C++ ++ ++L M+ G N + YT
Sbjct: 343 RLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYT 402
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
T++ + + E+A+ + +MK G + D + LI L ++ EA + +M E
Sbjct: 403 TLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLL-TKMDE 461
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
+G+ P+ + TM+ G +A +L+++ +PNV T+ L+ K G D
Sbjct: 462 SGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILD-SGFQPNVITYCALIDGLCKAGSID 520
Query: 432 ECLSQLLDDMVNK-HHLSLD--ITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
E +S NK L LD + YT ++ GLC+ A LF EM+ ++
Sbjct: 521 EAISHF-----NKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVV 575
Query: 489 CRLILDE-VKQKHMYDA 504
+LD +KQ +++DA
Sbjct: 576 YTALLDGYLKQGNLHDA 592
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 138/305 (45%), Gaps = 5/305 (1%)
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHT 239
AG+ +DA+ DE+ G+ N T +L+D LCKE KV A V + K+ + N
Sbjct: 341 AGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELL 400
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+ IHG ++A + EMK G + Y +IQ C + + LL +M
Sbjct: 401 YTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMD 460
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
G PN + YTT+M KSG EAI + +K+ G +P+ + LI L +A +
Sbjct: 461 ESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSID 520
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
EA+ + +M + G+ P+ + ++ +G +A + EM V +
Sbjct: 521 EAISHFN-KMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKV-VYTA 578
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
LL K G + + L M++ L LD+ YT I G C N A +F EMIG
Sbjct: 579 LLDGYLKQGNLHDAFA-LKAKMIDSG-LQLDLFCYTCFISGFCNLNMMPEAREVFSEMIG 636
Query: 480 HDITP 484
H I P
Sbjct: 637 HGIAP 641
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 122/255 (47%), Gaps = 3/255 (1%)
Query: 155 ALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTL 213
LL EM +KG + ++ +++ + ++A ++ GLE N ++D
Sbjct: 419 GLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDAC 478
Query: 214 CKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCV 272
K GKV A ++ + L S PN T+ I G CK +DEA +M+ G P V
Sbjct: 479 FKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNV 538
Query: 273 ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEK 332
+Y+ ++ C+ ++ +L +EM +G + V YT ++ K G+ +A + K
Sbjct: 539 QAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAK 598
Query: 333 MKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
M G + D + C I + + EA V+ EM +G+APD + +N +I+ + G
Sbjct: 599 MIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFS-EMIGHGIAPDRAVYNCLISKYQKLG 657
Query: 393 HHEKAFHVLEEMNKL 407
+ E+A + +EM ++
Sbjct: 658 NLEEAISLQDEMERV 672
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 119/262 (45%), Gaps = 8/262 (3%)
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
+D+A + ++ P + + I+ R + V L +++ A PNV T+
Sbjct: 138 LDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPA----PNVFTFNI 193
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN 372
V+ +L K G+ EA + +MK +G PD FN LI G+ + E + + EM +
Sbjct: 194 VIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVE-EMRRS 252
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
G D T+N +I F G E A+ M + E NV TF + + K G E
Sbjct: 253 GCKADVVTYNALINCFCKFGRMETAYGYFAAMKR-EGVMANVVTFSTFVDAFCKEGLVRE 311
Query: 433 CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLI 492
+ L + ++L+ TYT +I G C+A + + A +L EM+ + T ++
Sbjct: 312 AMK--LFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVL 369
Query: 493 LDEVKQKHMYDAAEKIEAVMKK 514
+D + ++ AE + +M+K
Sbjct: 370 VDGLCKERKVAEAEDVLRMMEK 391
>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
[Arabidopsis thaliana]
gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 185/404 (45%), Gaps = 46/404 (11%)
Query: 152 QMRALLEEMSKGHIVTLNTIAKVMR--RFSGAGQWEDAVRTFDELGTFGLEKNTETMNLL 209
Q+ ++ +S V +N+I M ++ ++E F G +G + + + L
Sbjct: 135 QVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPL 194
Query: 210 LDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGC 268
+ L KE + V+ E+ + I PN TFN+ I+ CK ++++A+ +++MK +GC
Sbjct: 195 MIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGC 254
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYE----------------------LLD---------- 296
P V+SY+T+I YC+ K+Y+ L+D
Sbjct: 255 SPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPG 314
Query: 297 ------EMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIY 350
EM Q PNV++Y ++++ L G EAI + +KM G +P+ +N LI
Sbjct: 315 SMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALIN 374
Query: 351 TLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHC 410
+ ++EA+ ++ + G P T +N +I + G + F + EEM + E
Sbjct: 375 GFCKNDMLKEALDMFG-SVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMER-EGI 432
Query: 411 KPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWA 470
P+V T++ L+ + G E +L D + +K D+ T+ +++ G CR + A
Sbjct: 433 VPDVGTYNCLIAGLCRNGNI-EAAKKLFDQLTSKGLP--DLVTFHILMEGYCRKGESRKA 489
Query: 471 YLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
+L KEM + PR+ T +++ ++ AA + M+K
Sbjct: 490 AMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEK 533
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/449 (22%), Positives = 205/449 (45%), Gaps = 51/449 (11%)
Query: 92 VCNAIQPSHYLVNKLIHRFKDDWKSALGI--FRWAGSCPGYEHSS-EIYEMMVDILGKVR 148
+C+ + + + + L+ + ++ + LG F+ +G GY+ S+ +M+ +L + R
Sbjct: 145 MCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYY-GYKLSALSCKPLMIALLKENR 203
Query: 149 QMDQ---MRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTET 205
D + ++ + ++ T N + + + G+ A +++ +G N +
Sbjct: 204 SADVEYVYKEMIRRKIQPNVFTFNVVINALCK---TGKMNKARDVMEDMKVYGCSPNVVS 260
Query: 206 MNLLLDTLCK---EGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQ 261
N L+D CK GK+ A +V E+ ++ + PN TFNI I G+ K + + + +
Sbjct: 261 YNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFK 320
Query: 262 EMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSG 321
EM P VISY+++I C S+ + D+M + G PN++TY +++ K+
Sbjct: 321 EMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKND 380
Query: 322 DFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTF 381
+EA+ + +K G+ P +R +N LI + ++ + + + EM G+ PD T+
Sbjct: 381 MLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDG-FALKEEMEREGIVPDVGTY 439
Query: 382 NTMITMFSHHGHHEKA-----------------FHV-----------------LEEMNKL 407
N +I +G+ E A FH+ L+EM+K+
Sbjct: 440 NCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKM 499
Query: 408 EHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKC 467
KP T++ ++K K G + + + M + L +++ +Y +++ G + K
Sbjct: 500 -GLKPRHLTYNIVMKGYCKEGNL-KAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKL 557
Query: 468 EWAYLLFKEMIGHDITPRYQTCRLILDEV 496
E A +L EM+ + P T ++ +E+
Sbjct: 558 EDANMLLNEMLEKGLVPNRITYEIVKEEM 586
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 117/244 (47%), Gaps = 13/244 (5%)
Query: 86 SLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIF---RWAGSCPGYEHSSEIYEMM 140
S++ V +QP+ N LI+ F D K AL +F + G+ P ++ +Y M+
Sbjct: 352 SMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVP----TTRMYNML 407
Query: 141 VDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGL 199
+D K+ ++D AL EEM + IV + T ++ G E A + FD+L + GL
Sbjct: 408 IDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL 467
Query: 200 EKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQW 258
+ T ++L++ C++G+ A + E+ K + P T+NI + G+CK + A
Sbjct: 468 P-DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATN 526
Query: 259 TIQEM-KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
+M K V SY+ ++Q Y ++ LL+EM +G PN +TY V +
Sbjct: 527 MRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEM 586
Query: 318 AKSG 321
G
Sbjct: 587 VDQG 590
>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Glycine max]
Length = 703
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/414 (24%), Positives = 179/414 (43%), Gaps = 48/414 (11%)
Query: 140 MVDILGKVRQMDQMRALLEEMSKGHIVT-LNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
++D L K RQ D + ++ +M ++ +++ + F A + G
Sbjct: 48 LIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSVLSLMTKRG 107
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLELK---SCIPPNAHTFNIFIHGWCKINRVDE 255
N +NL+L C+ G+ + A S+F ++K C+ P+ T+N ++G+CK R+ E
Sbjct: 108 FGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAE 167
Query: 256 AQWTIQEMK-GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG------------ 302
A+ + MK G C P +++YS +I YC+ + LL+EM+ +G
Sbjct: 168 ARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLI 227
Query: 303 -----------------------CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
PNVVTY+ +M L ++G + EA + + M G +
Sbjct: 228 SAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVR 287
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
PD + L L + R +A+ V + M + G P T T+N ++ + AF
Sbjct: 288 PDVVAYTVLADGLCKNGRAGDAIKVLDL-MVQKGEEPGTLTYNVVVNGLCKEDRMDDAFG 346
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIH 459
V+E M K + KP+ T++ LLK GK E + + K H+ D+ T +I
Sbjct: 347 VVEMMVK-KGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQ 405
Query: 460 GLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
GLC+ + A + M+ + T +++ Y AA K+ +K
Sbjct: 406 GLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEG------YLAARKLIEALK 453
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 164/352 (46%), Gaps = 7/352 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLN--TIAKVMRRFSGAGQWEDAVRTFDEL 194
Y +V+ K +++ + R L E M KG N T + ++ + +G+ + + +E+
Sbjct: 152 YNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEM 211
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRV 253
GL+ + + L+ C EG +E R +F E L+ + PN T++ + G + R
Sbjct: 212 EREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRW 271
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
EA +++M G P V++Y+ + C+ ++LD M +G P +TY V
Sbjct: 272 REASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVV 331
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
++ L K ++A + E M G KPD+ +N L+ L A ++ EA+ ++++ + E
Sbjct: 332 VNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKF 391
Query: 374 -VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
V PD T N +I G A + M ++ + N+ T++ L++ K E
Sbjct: 392 HVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEM-GLQGNIVTYNFLIEGYLAARKLIE 450
Query: 433 CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
L L + S + TY+++I+GLC+ A LF +M I P
Sbjct: 451 ALK--LWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRP 500
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 164/347 (47%), Gaps = 18/347 (5%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM----SKGHIVTLNTIAKVMRRFSGAGQW 184
G E + Y ++V+ L K +MD ++E M K VT NT+ ++ GAG+
Sbjct: 320 GEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTL---LKGLCGAGKI 376
Query: 185 EDAVRTFDELGT--FGLEKNTETMNLLLDTLCKEGKV-ELAR--SVFLELKSCIPPNAHT 239
+A+ + L + F ++ + T N L+ LCKEG+V + AR S +E+ + N T
Sbjct: 377 HEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMG--LQGNIVT 434
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+N I G+ ++ EA + G P ++YS +I C+ S L +M+
Sbjct: 435 YNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMK 494
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
G P V+ Y +M+ L + E+A + ++M+ V D FN +I +A V+
Sbjct: 495 DSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVK 554
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
A + EM + PD TF+ +I FS G ++A + E+M H P V F
Sbjct: 555 SAKELLS-EMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHV-PGVVVFDS 612
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANK 466
LLK G+T++ +S LL M +K + LD + ++ LC ++
Sbjct: 613 LLKGYGLKGETEKIIS-LLHQMADK-DVVLDSKLTSTILACLCHMSR 657
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 131/283 (46%), Gaps = 43/283 (15%)
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMK-GHGCH-PCVISYSTIIQSYCRQYNFSKVYE 293
N + N+ + G+C+ + D+A +MK + C P ++Y+T++ +C+ ++
Sbjct: 111 NVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARV 170
Query: 294 LLDEMQAQG-CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
L + M+ G C PN+VTY+ ++ KSG+ E + + E+M+ G K D
Sbjct: 171 LFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKAD----------- 219
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
V+VY +++I+ F G E + +EM + P
Sbjct: 220 ---------VFVY----------------SSLISAFCGEGDIETGRELFDEMLR-RKVSP 253
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
NV T+ L++ +TG+ E S++L DM + + D+ YT++ GLC+ + A
Sbjct: 254 NVVTYSCLMQGLGRTGRWREA-SEMLKDMTARG-VRPDVVAYTVLADGLCKNGRAGDAIK 311
Query: 473 LFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEAVMKK 514
+ M+ P T ++++ + K+ M DA +E ++KK
Sbjct: 312 VLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKK 354
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 125/287 (43%), Gaps = 12/287 (4%)
Query: 234 PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
PP+ + I K + D +M P S S + +S+ ++ S +
Sbjct: 39 PPSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFS 98
Query: 294 LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK-----IVGSKPDSRFFNCL 348
+L M +G NV V+ +SG ++A+ + +MK +V PD +N L
Sbjct: 99 VLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVV---PDCVTYNTL 155
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
+ +A R+ EA +++ P+ T++ +I + G + +LEEM + E
Sbjct: 156 VNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMER-E 214
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
K +V + L+ + G E +L D+M+ + +S ++ TY+ ++ GL R +
Sbjct: 215 GLKADVFVYSSLISAFCGEGDI-ETGRELFDEML-RRKVSPNVVTYSCLMQGLGRTGRWR 272
Query: 469 WAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEAVMKK 514
A + K+M + P ++ D + K DA + ++ +++K
Sbjct: 273 EASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQK 319
>gi|255554881|ref|XP_002518478.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542323|gb|EEF43865.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 606
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 178/403 (44%), Gaps = 44/403 (10%)
Query: 144 LGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKN 202
L K+ +++ + +EM S G+I +NT ++ G+ +AV G+ N
Sbjct: 138 LLKLNDVNRFWKMYKEMVSYGYIENVNTFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPN 197
Query: 203 TETMNLLLDTLCKEGKVELARSVF--LELKS--CIPPNAHTFNIFIHGWCKINRVDEAQW 258
T N+++D K G ++LA + +E+ S + P++ T+N F++G+CKI + A+
Sbjct: 198 VVTFNMIIDGAIKMGAMDLALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEE 257
Query: 259 TIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLA 318
+EM G P V +Y+T++ Y R + + L DE+ +G PN V Y +++ +L+
Sbjct: 258 FKKEMLGKEIEPNVRTYATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLS 317
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV----------- 367
GD E A + M PD ++ +I L R + EA Q+
Sbjct: 318 MEGDMEGASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAF 377
Query: 368 -----------------------EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
M G+ PD TF T+I G E A V E+M
Sbjct: 378 SHNVVINYLCRSNNLAGAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKM 437
Query: 405 NKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRA 464
K KPN+ ++ ++ K G D + LL D + + L D+ TY +IHG C
Sbjct: 438 IKTGE-KPNLLIYNSVINGFAKEGSFDPAI--LLIDTLRRMGL-FDVVTYNTLIHGYCNC 493
Query: 465 NKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAE 506
K + A+ LF EM I + T +++ + K H+ A E
Sbjct: 494 GKIDQAFALFSEMRNSGILASHVTYNTLINSLCKAGHVLQAKE 536
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 102/490 (20%), Positives = 202/490 (41%), Gaps = 61/490 (12%)
Query: 57 LCVDSPRLPDIDVIISKVHVGSSED--EVFQSLKQDHVCNAIQP-----SHYLVNKLIHR 109
+C SP + D ++ + +G++E EV L+ D + SH L ++R
Sbjct: 88 ICKSSPAVFD-ALVRTCTQIGATEGAYEVITKLQLDGFWVTVHAWNNFLSHLLKLNDVNR 146
Query: 110 FKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGK-VRQMDQMRALLEEMSKG---HI 165
F WK + + GY + + +++ LGK R ++ + + + G ++
Sbjct: 147 F---WKMYKEMVSY-----GYIENVNTFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNV 198
Query: 166 VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSV 225
VT N I + VR + + ++ ++ T N ++ CK G + +A
Sbjct: 199 VTFNMIIDGAIKMGAMDLALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEF 258
Query: 226 FLE-LKSCIPPNAHTFNIFIHGWCKINRVDEA-----------------------QWTIQ 261
E L I PN T+ + G+ ++ ++ A W
Sbjct: 259 KKEMLGKEIEPNVRTYATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSM 318
Query: 262 EMKGHGC------------HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
E G +P +YS +I+ CR ++ ++ L + + +
Sbjct: 319 EGDMEGASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFS 378
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM 369
+ V++YL +S + A ++ M + G PD F LI + +V+ A+ VY+ +M
Sbjct: 379 HNVVINYLCRSNNLAGAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYE-KM 437
Query: 370 PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
+ G P+ +N++I F+ G + A +++ + ++ +V T++ L+ GK
Sbjct: 438 IKTGEKPNLLIYNSVINGFAKEGSFDPAILLIDTLRRMGLF--DVVTYNTLIHGYCNCGK 495
Query: 430 TDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTC 489
D+ + L +M N L+ +T Y +I+ LC+A A L K M+ + P Y T
Sbjct: 496 IDQAFA-LFSEMRNSGILASHVT-YNTLINSLCKAGHVLQAKELMKMMVLRGLIPDYVTY 553
Query: 490 RLILDEVKQK 499
+++ +K
Sbjct: 554 TILITSFSKK 563
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 160/344 (46%), Gaps = 9/344 (2%)
Query: 131 EHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVR 189
E + Y +VD +V ++ L +E+ KG + ++ S G E A
Sbjct: 268 EPNVRTYATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASL 327
Query: 190 TFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE--LKSCIPPNAHTFNIFIHGW 247
++ + + T +++++ LC+ G + A FL+ L+ + +A + N+ I+
Sbjct: 328 LLSDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFK-FLQMILEMSLVRDAFSHNVVINYL 386
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
C+ N + A+ + M G P V+++ T+I +C+ ++ ++M G PN+
Sbjct: 387 CRSNNLAGAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNL 446
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
+ Y +V++ AK G F+ AI + + ++ +G D +N LI+ ++ +A ++
Sbjct: 447 LIYNSVINGFAKEGSFDPAILLIDTLRRMG-LFDVVTYNTLIHGYCNCGKIDQAFALFS- 504
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKT 427
EM +G+ T+NT+I GH +A +++ M L P+ T+ L+ S K
Sbjct: 505 EMRNSGILASHVTYNTLINSLCKAGHVLQAKELMKMM-VLRGLIPDYVTYTILITSFSKK 563
Query: 428 GKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAY 471
+E + +L D MV K + D TY ++ L + E+ Y
Sbjct: 564 CSPEEVI-ELHDYMVLKGVVP-DRQTYQTMVIPLLQEESVEFDY 605
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/406 (22%), Positives = 181/406 (44%), Gaps = 43/406 (10%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS 161
LV ++I +F++ + AL W HS E +++ +L ++ D ++
Sbjct: 9 LVGRVICKFQNSPQLALEFHDWVLEKKSVLHSIESCCVVIHVLVNSKRYDDALFIM---- 64
Query: 162 KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNT-ETMNLLLDTLCKEGKVE 220
G+++ +N I+ + + DA+ + ++ + K++ + L+ T + G E
Sbjct: 65 -GNLMNVNGISPL--------EVLDAL-----ISSYDICKSSPAVFDALVRTCTQIGATE 110
Query: 221 LARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
A V +L+ H +N F+ K+N V+ +EM +G V +++ II
Sbjct: 111 GAYEVITKLQLDGFWVTVHAWNNFLSHLLKLNDVNRFWKMYKEMVSYGYIENVNTFNLII 170
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS- 338
+ ++ + ++ G PNVVT+ ++ K G + A+++ KM+++
Sbjct: 171 YALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKMEVMSGC 230
Query: 339 --KPDSRFFNCLIY---TLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
KPDS +N + +G + +E ++ EM + P+ T+ T++ ++ G
Sbjct: 231 SVKPDSVTYNSFVNGFCKIGNLAVAEE----FKKEMLGKEIEPNVRTYATLVDGYTRVGS 286
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
E AF + +E+ + + PN ++ ++ G E S LL DM++K + D T
Sbjct: 287 LENAFRLCDELVE-KGLLPNSVIYNSIIHWLSMEGDM-EGASLLLSDMIDK-RIYPDQFT 343
Query: 454 YTLVIHGLCRANKCEWAY---------LLFKEMIGHDITPRYQTCR 490
Y++VI GLCR A+ L ++ H++ Y CR
Sbjct: 344 YSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINY-LCR 388
>gi|125596712|gb|EAZ36492.1| hypothetical protein OsJ_20823 [Oryza sativa Japonica Group]
Length = 604
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 191/409 (46%), Gaps = 24/409 (5%)
Query: 120 IFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK------GHIVTLNTIAK 173
I+ C Y ++V+ L K ++ +L+ MS+ +VTLNT+
Sbjct: 158 IYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVD 217
Query: 174 VMRRFSGAGQWEDAVRTFDEL--GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS 231
+ + +G+ ++A+ ++ G NT T N L+D C+ G + +A + ++++
Sbjct: 218 GLCK---SGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMEN 274
Query: 232 -CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK-----GHGCHPCVISYSTIIQSYCRQ 285
+P N T N + G C+ R A +E + G G ++YST++ +
Sbjct: 275 EGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGN---AVTYSTLVGALLHT 331
Query: 286 YNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFF 345
N EL E ++G P+ + Y T++S L ++G E+A + MK G K D++ +
Sbjct: 332 NNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAY 391
Query: 346 NCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMN 405
N LI R R+ EA + Q EM E G+ PD T+NT+++ G +L +M
Sbjct: 392 NILIAGFCRKKRLHEAYELLQ-EMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMI 450
Query: 406 KLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRAN 465
+ C+P+V TF L+ K GK DE L ++L M ++ + + Y +I LC+
Sbjct: 451 D-DGCQPSVITFGTLVHGYCKVGKIDEAL-RILRSM-DESGIHPNNVIYNTLIDFLCKRG 507
Query: 466 KCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
+ A LF EM + T +L ++ K+M + A ++ M++
Sbjct: 508 DVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMRE 556
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 165/382 (43%), Gaps = 68/382 (17%)
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC---IPPNAHTFNIFIHGWCKIN 251
G + + T +L++ LCK G+V A V + I P+ T N + G CK
Sbjct: 164 GCASVRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSG 223
Query: 252 RVDEA-QWTIQEMKG-HGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
RV EA + Q M HGC P ++Y+ +I ++CR N S YEL+++M+ +G P N+VT
Sbjct: 224 RVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVT 283
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIV--------------------------------- 336
T++ L ++G A+ + + V
Sbjct: 284 LNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHE 343
Query: 337 ----GSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
G PD+ + +I L +A R+++A + M E G DT +N +I F
Sbjct: 344 KMSEGHSPDAIMYFTMISGLTQAGRLEDACSMAS-SMKEAGFKLDTKAYNILIAGFCRKK 402
Query: 393 HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG---KTDECLSQLLDDMVNKHHLSL 449
+A+ +L+EM ++ +P+V T++ LL K G DE L +++DD
Sbjct: 403 RLHEAYELLQEMKEV-GIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPS---- 457
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR---YQT-----CRL--------IL 493
+ T+ ++HG C+ K + A + + M I P Y T C+ +
Sbjct: 458 -VITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELF 516
Query: 494 DEVKQKHMYDAAEKIEAVMKKL 515
DE+K+K + A++K L
Sbjct: 517 DEMKEKSVPANVTTFNALLKGL 538
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 138/272 (50%), Gaps = 6/272 (2%)
Query: 161 SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVE 220
KG+ VT +T+ + + G A+ F E + G + ++ L + G++E
Sbjct: 314 GKGNAVTYSTLVGALLHTNNVGM---AMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLE 370
Query: 221 LARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
A S+ +K + + +NI I G+C+ R+ EA +QEMK G P V +Y+T++
Sbjct: 371 DACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLL 430
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
C+ +F+ V ELL +M GC P+V+T+ T++ K G +EA+RI M G
Sbjct: 431 SGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIH 490
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
P++ +N LI L + V A+ ++ EM E V + +TFN ++ EKAF
Sbjct: 491 PNNVIYNTLIDFLCKRGDVDLAIELFD-EMKEKSVPANVTTFNALLKGLRDKNMPEKAFE 549
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
++++M + E C P+ T L++ G+TD
Sbjct: 550 LMDQMRE-ERCFPDYVTVDVLMEWLPVIGETD 580
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 98/253 (38%), Gaps = 71/253 (28%)
Query: 158 EEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEG 217
E+MS+GH ++ + AG+ EDA + G + +T+ N+L+ C++
Sbjct: 343 EKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKK 402
Query: 218 KVELARSVFLELK-----------------SCIP-------------------PNAHTFN 241
++ A + E+K SC P+ TF
Sbjct: 403 RLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFG 462
Query: 242 IFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFS------------ 289
+HG+CK+ ++DEA ++ M G HP + Y+T+I C++ +
Sbjct: 463 TLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEK 522
Query: 290 -----------------------KVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
K +EL+D+M+ + C P+ VT +M +L G+ +
Sbjct: 523 SVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWLPVIGETDRL 582
Query: 327 IRITEKMKIVGSK 339
R ++ + SK
Sbjct: 583 KRFMQQGEHTASK 595
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 74/177 (41%), Gaps = 3/177 (1%)
Query: 304 PPNVVTYTTVMS-YLAKSGDFEEAIRITEKMKIVGSKPDSRF-FNCLIYTLGRASRVQEA 361
PP+ + ++S LA+ E A R G+ F FN ++ L R V
Sbjct: 96 PPSAPLLSAILSKLLARFSSPEPAARFLAASLAAGAPAPDVFAFNSILAALARVRDVPGM 155
Query: 362 VYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE-HCKPNVQTFHPL 420
+Y + V PD T+ ++ G A VL+ M++ + +P+V T + +
Sbjct: 156 ARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTV 215
Query: 421 LKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
+ K+G+ E L+ + M + H + TY +I CR AY L ++M
Sbjct: 216 VDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKM 272
>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
Length = 454
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 182/381 (47%), Gaps = 20/381 (5%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGT 196
Y ++ L K + MD+ +L M + T N+I M + +GQ E A+ F ++ +
Sbjct: 49 YNSIIAALSKAQAMDRAMEVLTVMVMPNCFTYNSI---MHGYCSSGQSEKAIGIFRKMCS 105
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDE 255
G+E + T N L+D LCK GK AR +F + K + P+ T+ +HG+ + E
Sbjct: 106 DGIEPDVVTYNSLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVE 165
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
+ M +G ++ +I +Y +Q +V + +M+ QG PN V Y TV+
Sbjct: 166 MHDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVID 225
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL---GRASRVQEAVYVYQVEMPEN 372
L K G ++A+ E+M G P+ + LI+ L + + +E ++ E+ +
Sbjct: 226 GLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIF----EILDQ 281
Query: 373 GVAPDTSTFNTMITMFSHHGH---HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
G+ P+ FNT++ G +K F +L + P+V T+ L+ GK
Sbjct: 282 GINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIG----VNPDVITYSTLIDGYCLAGK 337
Query: 430 TDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTC 489
D + +LL MV+ L D TY+ +I+G C+ N+ E A LFKEM + + P T
Sbjct: 338 MDGAM-KLLTGMVSVG-LKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITY 395
Query: 490 RLILDEVKQKHMYDAAEKIEA 510
+IL + + AA+++ A
Sbjct: 396 NIILHGLFRTRRTAAAKELYA 416
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 102/439 (23%), Positives = 202/439 (46%), Gaps = 19/439 (4%)
Query: 47 DGARLDHHQVLCVDSPRLPDI---DVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLV 103
D A + +H++L D PD + II+ + + D + L + P+ +
Sbjct: 28 DKAYITYHEML--DRRVSPDAVTYNSIIAALSKAQAMDRAMEVLTV-----MVMPNCFTY 80
Query: 104 NKLIHRFKDDWKS--ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS 161
N ++H + +S A+GIFR S G E Y ++D L K + + R + + M
Sbjct: 81 NSIMHGYCSSGQSEKAIGIFRKMCS-DGIEPDVVTYNSLMDYLCKNGKCTEARKIFDSMV 139
Query: 162 K-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVE 220
K G + T ++ ++ G + + G++ + N+L+ K+ KV+
Sbjct: 140 KRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQEKVD 199
Query: 221 LARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
VF +++ + PNA + I G CK+ R+D+A ++M G P V+ Y+++I
Sbjct: 200 EVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLI 259
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
+ C + K EL+ E+ QG PN+V + T++ L K G E+ ++ + + +G
Sbjct: 260 HALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVN 319
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
PD ++ LI A ++ A+ + M G+ PD+ T++T+I + E A
Sbjct: 320 PDVITYSTLIDGYCLAGKMDGAMKLL-TGMVSVGLKPDSVTYSTLINGYCKINRMEDALA 378
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIH 459
+ +EM P++ T++ +L F+T +T ++ L + + L+++TY +++
Sbjct: 379 LFKEMES-NGVNPDIITYNIILHGLFRTRRT--AAAKELYARITESGTQLELSTYNIILM 435
Query: 460 GLCRANKCEWAYLLFKEMI 478
+ N + F+ +
Sbjct: 436 DFAKTNSLMMHFGCFRTYV 454
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 122/255 (47%), Gaps = 16/255 (6%)
Query: 234 PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
PP+ ++N I G K VD+A T EM P ++Y++II + + + E
Sbjct: 8 PPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAME 67
Query: 294 LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLG 353
+L M PN TY ++M SG E+AI I KM G +PD +N L+ L
Sbjct: 68 VLTVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLC 123
Query: 354 RASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH----HEKAFHVLEEMNKLEH 409
+ + EA ++ M + G+ PD +T+ T++ ++ G H+ +++ +L+H
Sbjct: 124 KNGKCTEARKIFD-SMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDH 182
Query: 410 CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEW 469
F+ L+ + K K DE + L+ + + L+ + Y VI GLC+ + +
Sbjct: 183 -----HVFNILICAYTKQEKVDEVV--LVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDD 235
Query: 470 AYLLFKEMIGHDITP 484
A L F++MI +TP
Sbjct: 236 AMLNFEQMIDKGLTP 250
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 122/248 (49%), Gaps = 9/248 (3%)
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
C P V+SY+TII ++ + K Y EM + P+ VTY ++++ L+K+ + A+
Sbjct: 7 CPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAM 66
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITM 387
+ M + P+ +N +++ + + ++A+ +++ +M +G+ PD T+N+++
Sbjct: 67 EVLTVMVM----PNCFTYNSIMHGYCSSGQSEKAIGIFR-KMCSDGIEPDVVTYNSLMDY 121
Query: 388 FSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHL 447
+G +A + + M K KP++ T+ LL G E + LL MV ++ +
Sbjct: 122 LCKNGKCTEARKIFDSMVK-RGLKPDITTYGTLLHGYASKGALVE-MHDLLALMV-QNGM 178
Query: 448 SLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAE 506
LD + ++I + K + L+F +M +TP R ++D + K + DA
Sbjct: 179 QLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAML 238
Query: 507 KIEAVMKK 514
E ++ K
Sbjct: 239 NFEQMIDK 246
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 175/346 (50%), Gaps = 15/346 (4%)
Query: 145 GKVRQ-MDQMRALLEEMSKGHIVTLN-TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKN 202
G+V+ +D MR + E +G I T V+ + G+ ++AV+ FDE+ T G K
Sbjct: 199 GRVQAALDIMREMRE---RGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKP 255
Query: 203 TETM-NLLLDTLCKEGKVELA---RSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQW 258
M N L+ C +GK++ A R +E + T+N+ +H R EA
Sbjct: 256 EAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAM--TVATYNLLVHALFMDGRGTEAYE 313
Query: 259 TIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLA 318
++EM G G V +Y+ +I +C++ N K E+ + M +G VVTYT+++ L+
Sbjct: 314 LVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALS 373
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDT 378
K G +E ++ ++ G +PD +N LI + + + A + EM + +APD
Sbjct: 374 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMG-EMEKKRIAPDD 432
Query: 379 STFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLL 438
T+NT++ G ++A +++EM K +P++ T++ L+ G + L ++
Sbjct: 433 VTYNTLMRGLCLLGRVDEARKLIDEMTK-RGIQPDLVTYNTLISGYSMKGDVKDAL-RIR 490
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
++M+NK + + TY +I GLC+ + + A + KEM+ + ITP
Sbjct: 491 NEMMNK-GFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITP 535
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 170/393 (43%), Gaps = 47/393 (11%)
Query: 155 ALLEEMSKGHIVTLNTIAKVM-RRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTL 213
AL +M + + T +M R AG+ A+ ++ N T N ++
Sbjct: 140 ALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGF 195
Query: 214 CKEGKVELARSVFLELK--SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG-CHP 270
C G+V+ A + E++ I PN +T+ I GWCK+ RVDEA EM G P
Sbjct: 196 CSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKP 255
Query: 271 CVISYSTIIQSYCRQ------------------------YNF-----------SKVYELL 295
+ Y+ +I YC Q YN ++ YEL+
Sbjct: 256 EAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELV 315
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
+EM +G +V TY +++ K G+ ++A+ I E M G + + LIY L +
Sbjct: 316 EEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKK 375
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQ 415
+VQE ++ E G+ PD +N +I S G+ ++AF ++ EM K + P+
Sbjct: 376 GQVQETDKLFD-EAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEK-KRIAPDDV 433
Query: 416 TFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFK 475
T++ L++ G+ DE +L+D+M K + D+ TY +I G + A +
Sbjct: 434 TYNTLMRGLCLLGRVDEA-RKLIDEMT-KRGIQPDLVTYNTLISGYSMKGDVKDALRIRN 491
Query: 476 EMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
EM+ P T ++ + + D AE +
Sbjct: 492 EMMNKGFNPTLLTYNALIQGLCKNGQGDDAENM 524
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 146/309 (47%), Gaps = 6/309 (1%)
Query: 81 DEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWK--SALGIFRWAGSCPGYEHSSEIYE 138
DE + + ++P + N LI + D K +AL ++R G + Y
Sbjct: 238 DEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTAL-LYRDRMVERGVAMTVATYN 296
Query: 139 MMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTF 197
++V L + + L+EEM KG + + T ++ G + A+ F+ +
Sbjct: 297 LLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRR 356
Query: 198 GLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEA 256
G+ T L+ L K+G+V+ +F E ++ I P+ +N I+ +D A
Sbjct: 357 GVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRA 416
Query: 257 QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSY 316
+ EM+ P ++Y+T+++ C + +L+DEM +G P++VTY T++S
Sbjct: 417 FEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISG 476
Query: 317 LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
+ GD ++A+RI +M G P +N LI L + + +A + + EM ENG+ P
Sbjct: 477 YSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVK-EMVENGITP 535
Query: 377 DTSTFNTMI 385
D ST+ ++I
Sbjct: 536 DDSTYISLI 544
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 88/195 (45%), Gaps = 6/195 (3%)
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
+ + L +M P T+ ++ +L +G A+ + +M +P++ +N +
Sbjct: 136 APAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTV 191
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
I RVQ A+ + + G+AP+ T+ T+I+ + G ++A V +EM
Sbjct: 192 IAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKG 251
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
KP ++ L+ GK D L L D + + +++ + TY L++H L +
Sbjct: 252 EVKPEAVMYNALIGGYCDQGKLDTAL--LYRDRMVERGVAMTVATYNLLVHALFMDGRGT 309
Query: 469 WAYLLFKEMIGHDIT 483
AY L +EM G +
Sbjct: 310 EAYELVEEMGGKGLA 324
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 90/205 (43%), Gaps = 3/205 (1%)
Query: 115 KSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEE-MSKGHIVTLNTIAK 173
K AL IF S G + Y ++ L K Q+ + L +E + +G L
Sbjct: 344 KKALEIFENM-SRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNA 402
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSC 232
++ S +G + A E+ + + T N L+ LC G+V+ AR + E+ K
Sbjct: 403 LINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRG 462
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
I P+ T+N I G+ V +A EM G +P +++Y+ +IQ C+
Sbjct: 463 IQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAE 522
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYL 317
++ EM G P+ TY +++ L
Sbjct: 523 NMVKEMVENGITPDDSTYISLIEGL 547
>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
Length = 628
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 132/502 (26%), Positives = 212/502 (42%), Gaps = 29/502 (5%)
Query: 31 NCSHIVSSSPIESYCSDGARLDHHQVLC---VDSPRLPDI---DVIISKVHVGSSEDEVF 84
+ S + ++ I+ C G LD Q L D+ P++ +I + +
Sbjct: 7 DASVVTYTTLIDGLCKSG-DLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAI 65
Query: 85 QSLKQDHVCNAIQPSHYLVNKLIHRF-----KDDWKSALGIFRWAGSCPGYEHSSEIYEM 139
Q++K+ + + +P N LIH DD L G P + Y
Sbjct: 66 QTVKR-MLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHI----TYST 120
Query: 140 MVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGA----GQWEDAVRTFDEL 194
+V + R++DQ R L+ EM +G + L + F A ++E R DE+
Sbjct: 121 LVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYE--CRDGDEM 178
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRV 253
G + T N + LCK GK++ + E+ + IPP+ TF I G CK NR+
Sbjct: 179 IESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRI 238
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA--QGCPPNVVTYT 311
D+A + M GC P ++YS ++ + R V E+L+ MQA GC V T+
Sbjct: 239 DDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHN 298
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
+ L +SG F A I M GS P+ +N +I L ++ V +A + + +
Sbjct: 299 AFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDS 358
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
PD FNT+I+ F G +A +L EM C P+V T++ L+ K G
Sbjct: 359 GCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLK 418
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRL 491
+ ++LL + ++ TY +I+G + E A LF EM P T
Sbjct: 419 Q--AKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNT 476
Query: 492 ILDEVKQKHMYDAAEKIEAVMK 513
+L + M AE + +K
Sbjct: 477 VLSAFSKAGMMSKAEGVYQQLK 498
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 174/355 (49%), Gaps = 8/355 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDA 187
GY+ S Y ++D L K +D +ALL++M+ G + T ++ A + DA
Sbjct: 5 GYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDA 64
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHG 246
++T + G E + T N L+ LC +++ A V EL ++ PN T++ +
Sbjct: 65 IQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIW 124
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL--DEMQAQGCP 304
C+ R+D+A+ I+EM G ++ Y I +C S YE DEM G
Sbjct: 125 NCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIESGRI 184
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
P+VVTY T +S L K+G ++ + + E+M G PD F +I L +A+R+ +A V
Sbjct: 185 PDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQV 244
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE-HCKPNVQTFHPLLKS 423
++ M E G PD+ T++ M+ S + VLE M ++ C V T + + +
Sbjct: 245 FK-GMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGA 303
Query: 424 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
++GK + LL M+ L ++ +Y VI GLC++ + A+ L ++M+
Sbjct: 304 LCRSGKFPLAKNILL-GMIESGSLP-NLLSYNFVIDGLCKSGNVDDAWKLSRKML 356
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 150/299 (50%), Gaps = 11/299 (3%)
Query: 156 LLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEK-NTETMNLLLDTLC 214
LL + G + L + V+ +G +DA + ++ G K + N L+ C
Sbjct: 317 LLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFC 376
Query: 215 KEGKVELARSVFLELKS---CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPC 271
K G++ A + +E+K+ C+P + T+N I G K + +A+ +QEM+ GC P
Sbjct: 377 KAGRLSQAHQLLIEMKAKNICVP-DVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPN 435
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
V++Y+ +I Y + + + L DEM A+GC P+++TY TV+S +K+G +A + +
Sbjct: 436 VVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQ 495
Query: 332 KMKIVGS--KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFS 389
++K S PD+ + LI RA ++ + + Q EM G + D+ T+N +I +
Sbjct: 496 QLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQ-EMTARGWSCDSYTYNVLIAKLA 554
Query: 390 HHGH-HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHL 447
KA V ++M + C P+ F+ L++ +TG + S ++ +M K HL
Sbjct: 555 ETEEVPSKALAVYQQMLD-QDCVPSASIFNSLVRLFLRTGDVNSARS-MVQEMNEKGHL 611
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 136/282 (48%), Gaps = 39/282 (13%)
Query: 263 MKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGD 322
M +G V++Y+T+I C+ + LL +M GC PNVVTYT ++ L K+
Sbjct: 1 MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60
Query: 323 FEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFN 382
+AI+ ++M G +PD +N LI+ L A+R+ +A V Q E+ NG AP+ T++
Sbjct: 61 PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQ-ELVRNGFAPNHITYS 119
Query: 383 TMITMFSHHGHHEKAFHVLEEM-------------------------NKLEHCK------ 411
T++ ++A ++ EM + C+
Sbjct: 120 TLVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMI 179
Query: 412 -----PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANK 466
P+V T++ + K GK D+ L ++L++M ++ + D+ T+ +I GLC+AN+
Sbjct: 180 ESGRIPDVVTYNTFISGLCKAGKLDKGL-EMLEEM-DRGGIPPDVVTFCSIISGLCKANR 237
Query: 467 CEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+ A+ +FK M+ P T ++LD + + + D +++
Sbjct: 238 IDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEV 279
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 95/211 (45%), Gaps = 5/211 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++D K + Q + LL+EM + G + T A ++ ++ G +E+A FDE+
Sbjct: 404 YNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMS 463
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK---SCIPPNAHTFNIFIHGWCKINR 252
G + T N +L K G + A V+ +LK S P+A T+ I I G+C+
Sbjct: 464 AKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAED 523
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF-SKVYELLDEMQAQGCPPNVVTYT 311
++ +QEM G +Y+ +I SK + +M Q C P+ +
Sbjct: 524 TEQGLTLLQEMTARGWSCDSYTYNVLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFN 583
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDS 342
+++ ++GD A + ++M G D+
Sbjct: 584 SLVRLFLRTGDVNSARSMVQEMNEKGHLVDA 614
>gi|297605515|ref|NP_001057291.2| Os06g0249500 [Oryza sativa Japonica Group]
gi|255676892|dbj|BAF19205.2| Os06g0249500 [Oryza sativa Japonica Group]
Length = 690
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 191/409 (46%), Gaps = 24/409 (5%)
Query: 120 IFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK------GHIVTLNTIAK 173
I+ C Y ++V+ L K ++ +L+ MS+ +VTLNT+
Sbjct: 158 IYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVD 217
Query: 174 VMRRFSGAGQWEDAVRTFDEL--GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS 231
+ + +G+ ++A+ ++ G NT T N L+D C+ G + +A + ++++
Sbjct: 218 GLCK---SGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMEN 274
Query: 232 -CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK-----GHGCHPCVISYSTIIQSYCRQ 285
+P N T N + G C+ R A +E + G G ++YST++ +
Sbjct: 275 EGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGN---AVTYSTLVGALLHT 331
Query: 286 YNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFF 345
N EL E ++G P+ + Y T++S L ++G E+A + MK G K D++ +
Sbjct: 332 NNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAY 391
Query: 346 NCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMN 405
N LI R R+ EA + Q EM E G+ PD T+NT+++ G +L +M
Sbjct: 392 NILIAGFCRKKRLHEAYELLQ-EMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMI 450
Query: 406 KLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRAN 465
+ C+P+V TF L+ K GK DE L ++L M ++ + + Y +I LC+
Sbjct: 451 D-DGCQPSVITFGTLVHGYCKVGKIDEAL-RILRSM-DESGIHPNNVIYNTLIDFLCKRG 507
Query: 466 KCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
+ A LF EM + T +L ++ K+M + A ++ M++
Sbjct: 508 DVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMRE 556
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 165/382 (43%), Gaps = 68/382 (17%)
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC---IPPNAHTFNIFIHGWCKIN 251
G + + T +L++ LCK G+V A V + I P+ T N + G CK
Sbjct: 164 GCASVRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSG 223
Query: 252 RVDEA-QWTIQEMKG-HGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
RV EA + Q M HGC P ++Y+ +I ++CR N S YEL+++M+ +G P N+VT
Sbjct: 224 RVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVT 283
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIV--------------------------------- 336
T++ L ++G A+ + + V
Sbjct: 284 LNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHE 343
Query: 337 ----GSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
G PD+ + +I L +A R+++A + M E G DT +N +I F
Sbjct: 344 KMSEGHSPDAIMYFTMISGLTQAGRLEDACSMAS-SMKEAGFKLDTKAYNILIAGFCRKK 402
Query: 393 HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG---KTDECLSQLLDDMVNKHHLSL 449
+A+ +L+EM ++ +P+V T++ LL K G DE L +++DD
Sbjct: 403 RLHEAYELLQEMKEV-GIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQP----- 456
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR---YQT-----CRL--------IL 493
+ T+ ++HG C+ K + A + + M I P Y T C+ +
Sbjct: 457 SVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELF 516
Query: 494 DEVKQKHMYDAAEKIEAVMKKL 515
DE+K+K + A++K L
Sbjct: 517 DEMKEKSVPANVTTFNALLKGL 538
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 134/263 (50%), Gaps = 6/263 (2%)
Query: 161 SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVE 220
KG+ VT +T+ + + G A+ F E + G + ++ L + G++E
Sbjct: 314 GKGNAVTYSTLVGALLHTNNVGM---AMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLE 370
Query: 221 LARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
A S+ +K + + +NI I G+C+ R+ EA +QEMK G P V +Y+T++
Sbjct: 371 DACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLL 430
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
C+ +F+ V ELL +M GC P+V+T+ T++ K G +EA+RI M G
Sbjct: 431 SGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIH 490
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
P++ +N LI L + V A+ ++ EM E V + +TFN ++ EKAF
Sbjct: 491 PNNVIYNTLIDFLCKRGDVDLAIELFD-EMKEKSVPANVTTFNALLKGLRDKNMPEKAFE 549
Query: 400 VLEEMNKLEHCKPNVQTFHPLLK 422
++++M + E C P+ T L++
Sbjct: 550 LMDQMRE-ERCFPDYVTVDVLME 571
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 89/231 (38%), Gaps = 71/231 (30%)
Query: 158 EEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEG 217
E+MS+GH ++ + AG+ EDA + G + +T+ N+L+ C++
Sbjct: 343 EKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKK 402
Query: 218 KVELARSVFLELK-----------------SC-------------------IPPNAHTFN 241
++ A + E+K SC P+ TF
Sbjct: 403 RLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFG 462
Query: 242 IFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFS------------ 289
+HG+CK+ ++DEA ++ M G HP + Y+T+I C++ +
Sbjct: 463 TLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEK 522
Query: 290 -----------------------KVYELLDEMQAQGCPPNVVTYTTVMSYL 317
K +EL+D+M+ + C P+ VT +M +L
Sbjct: 523 SVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWL 573
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 74/177 (41%), Gaps = 3/177 (1%)
Query: 304 PPNVVTYTTVMS-YLAKSGDFEEAIRITEKMKIVGSKPDSRF-FNCLIYTLGRASRVQEA 361
PP+ + ++S LA+ E A R G+ F FN ++ L R V
Sbjct: 96 PPSAPLLSAILSKLLARFSSPEPAARFLAASLAAGAPAPDVFAFNSILAALARVRDVPGM 155
Query: 362 VYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE-HCKPNVQTFHPL 420
+Y + V PD T+ ++ G A VL+ M++ + +P+V T + +
Sbjct: 156 ARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTV 215
Query: 421 LKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
+ K+G+ E L+ + M + H + TY +I CR AY L ++M
Sbjct: 216 VDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKM 272
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 170/374 (45%), Gaps = 38/374 (10%)
Query: 170 TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--L 227
T ++R G+ DA+ FD++ G + N T L++ LCK G A + +
Sbjct: 139 TFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSM 198
Query: 228 ELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYN 287
E +C P+ + I CK +V EA +M G G P + +Y+++I S C
Sbjct: 199 EQGNC-QPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCE 257
Query: 288 FSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNC 347
+ V LL++M P+VV ++TV+ L K G EA + + M I G +P+ +N
Sbjct: 258 WKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNA 317
Query: 348 LIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKL 407
L+ S + EAV V+ M NG AP+ ++NT+I + +KA ++ EEM +
Sbjct: 318 LMDGHCLQSEMDEAVKVFDT-MVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQK 376
Query: 408 EHCKPNVQTFHPLLKSCFKTGKTDECLSQ------------------LLDDMVNKHHLS- 448
E PN T++ L+ G+ + ++ LLD + K HL
Sbjct: 377 ELI-PNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDE 435
Query: 449 --------------LDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
DI YT+VI G+CRA + E A +F + + P +T ++++
Sbjct: 436 AMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMIN 495
Query: 495 EVKQKHMYDAAEKI 508
+ ++ + D A K+
Sbjct: 496 GLCRRGLLDEANKL 509
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 180/378 (47%), Gaps = 7/378 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
+ ++ + K +Q + +L +M S G + T+ ++ F + A ++
Sbjct: 70 FNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKIL 129
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
GL+ +T T L+ LC EGK+ A +F ++ PN T+ I+G CK+ +
Sbjct: 130 KLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTN 189
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
A ++ M+ C P V+ Y++II S C+ ++ + L +M QG P++ TYT+++
Sbjct: 190 AAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLI 249
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
L +++ + +M PD F+ ++ L + ++ EA V + M GV
Sbjct: 250 HSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDM-MIIRGV 308
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
P+ T+N ++ ++A V + M + PNV +++ L+ K + D+
Sbjct: 309 EPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGY-APNVISYNTLINGYCKIQRMDKA- 366
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
+ L ++M K L + TY ++HGLC + + A LF EM+ H P T R++LD
Sbjct: 367 TYLFEEMCQKE-LIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLD 425
Query: 495 EV-KQKHMYDAAEKIEAV 511
+ K+ H+ +A ++ +
Sbjct: 426 YLCKKSHLDEAMALLKTI 443
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 171/375 (45%), Gaps = 6/375 (1%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
+Y ++D L K RQ+ + L +M +G + T ++ +W+ +++
Sbjct: 209 VYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQM 268
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRV 253
+ + + ++D LCKEGK+ A V + + + PN T+N + G C + +
Sbjct: 269 INSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEM 328
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
DEA M +G P VISY+T+I YC+ K L +EM + PN VTY T+
Sbjct: 329 DEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTL 388
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
M L G ++AI + +M G PD + L+ L + S + EA+ + + N
Sbjct: 389 MHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSN- 447
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
+ PD + +I G E A + ++ + +PNV+T+ ++ + G DE
Sbjct: 448 MDPDIQIYTIVIDGMCRAGELEAARDIFSNLSS-KGLRPNVRTYTIMINGLCRRGLLDEA 506
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
++L +M + + S D TY + GL + + A L +EM+ + T L++
Sbjct: 507 -NKLFMEM-DGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLV 564
Query: 494 DEVKQKHMYDAAEKI 508
+ + + + ++I
Sbjct: 565 EMLCDDKLDQSVKQI 579
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 157/341 (46%), Gaps = 40/341 (11%)
Query: 184 WEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNI 242
+DA+ +F+ + +T N LL ++ K + S+ ++ S IPP+ +T NI
Sbjct: 48 LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 107
Query: 243 FIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
I+ +C +NR A + ++ G P +++T+I+ C + L D+M +G
Sbjct: 108 LINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 167
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
PNVVTY T+++ L K G+ AIR+ M+ +PD + +I +L + +V EA
Sbjct: 168 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 227
Query: 363 YVYQVEMPENGVAPDTST-----------------------------------FNTMITM 387
++ +M G++PD T F+T++
Sbjct: 228 NLFS-KMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDA 286
Query: 388 FSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHL 447
G +A H + +M + +PNV T++ L+ + DE + ++ D MV+ +
Sbjct: 287 LCKEGKITEA-HDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAV-KVFDTMVHNGY- 343
Query: 448 SLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ ++ +Y +I+G C+ + + A LF+EM ++ P T
Sbjct: 344 APNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVT 384
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 135/285 (47%), Gaps = 11/285 (3%)
Query: 233 IPP--NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSK 290
+PP ++ + N F N +D+A + M P + ++ ++ S + +
Sbjct: 26 LPPYFSSLSHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPT 85
Query: 291 VYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIY 350
V+ L ++M + G PP+V T +++ A + K+ +G +PD+ F LI
Sbjct: 86 VFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIR 145
Query: 351 TLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHC 410
L ++ +A++++ +M G P+ T+ T+I G+ A +L M + +C
Sbjct: 146 GLCVEGKIGDALHLFD-KMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQ-GNC 203
Query: 411 KPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWA 470
+P+V + ++ S K + E + L MV + +S DI TYT +IH LC N CEW
Sbjct: 204 QPDVVVYTSIIDSLCKDRQVTEAFN-LFSKMVGQ-GISPDIFTYTSLIHSLC--NLCEWK 259
Query: 471 YL--LFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEAVM 512
++ L +MI I P ++D + K+ + +A + ++ ++
Sbjct: 260 HVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMI 304
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 132/301 (43%), Gaps = 44/301 (14%)
Query: 59 VDSPRLPDIDVIISKVHVGSSEDEVFQS--LKQDHVCNAIQPSHYLVNKLI--HRFKDDW 114
++S +PD+ + + V E ++ ++ + + ++P+ N L+ H + +
Sbjct: 269 INSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEM 328
Query: 115 KSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIA-- 172
A+ +F GY + Y +++ K+++MD+ L EEM + ++ NT+
Sbjct: 329 DEAVKVFDTMVH-NGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIP-NTVTYN 386
Query: 173 KVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKE---------------- 216
+M G+ +DA+ F E+ G + T +LLD LCK+
Sbjct: 387 TLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGS 446
Query: 217 -------------------GKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEA 256
G++E AR +F L S + PN T+ I I+G C+ +DEA
Sbjct: 447 NMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEA 506
Query: 257 QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSY 316
EM G+GC P +Y+TI Q + + +LL EM A+G +V T T ++
Sbjct: 507 NKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEM 566
Query: 317 L 317
L
Sbjct: 567 L 567
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 77/165 (46%), Gaps = 6/165 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHI---VTLNTIAKVMRRFSGAGQWEDAVRTFDE 193
Y +++D L K +D+ ALL+ + ++ + + TI V+ AG+ E A F
Sbjct: 420 YRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTI--VIDGMCRAGELEAARDIFSN 477
Query: 194 LGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINR 252
L + GL N T ++++ LC+ G ++ A +F+E+ + P+ T+N G +
Sbjct: 478 LSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKE 537
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDE 297
A +QEM G V + + +++ C V ++L E
Sbjct: 538 ALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQILSE 582
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 175/362 (48%), Gaps = 27/362 (7%)
Query: 165 IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARS 224
+VT ++ VM + AG E AV ++ GL+ N T L+D CK+G ++ A
Sbjct: 290 VVTFTSLIHVMCK---AGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALL 346
Query: 225 VFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYC 283
++ C I P+ +N I+G+C + R+DEA+ + EM+ G P V++YSTII +YC
Sbjct: 347 AVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYC 406
Query: 284 RQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSR 343
+ + +EL +M +G P+ +TY++++ L + +A + + M +G +PD
Sbjct: 407 KNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEF 466
Query: 344 FFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG----------- 392
+ LI + V+ A+ ++ +M + GV PD T++ +I S
Sbjct: 467 TYTSLIDGHCKEGNVERALSLHD-KMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFK 525
Query: 393 -HHEKAFHVLEEMNKLEHC--KPNVQTFHPLLKS-CFK--TGKTDECLSQLLDDMVNKHH 446
+HE+ + + L HC K +++ LLK C K + D+ +LD +
Sbjct: 526 LYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLD-----RN 580
Query: 447 LSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAE 506
+LD + Y+++IHG CRA A K+M+ P + ++ + + M A+
Sbjct: 581 WNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEAD 640
Query: 507 KI 508
++
Sbjct: 641 QV 642
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 169/367 (46%), Gaps = 5/367 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAV 188
GY S Y ++ L R +S G + T ++R G G ++A+
Sbjct: 111 GYVPSVLAYNAVLLALSDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEAL 170
Query: 189 RTFDELGTFGLEKNTETMNLLLDTLCKEGKVELA-RSVFLELKSCIPPNAHTFNIFIHGW 247
++ G N T N L+ + G+V+ A R V + L + PN TFN ++G
Sbjct: 171 SILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGM 230
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
CK ++++A+ EM G P +SY+T++ YC+ + + EM +G P+V
Sbjct: 231 CKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDV 290
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
VT+T+++ + K+G+ E A+ + +M+ G + + F LI + + +A+ +
Sbjct: 291 VTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVR- 349
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKT 427
M + + P +N +I + G ++A +L EM + KP+V T+ ++ + K
Sbjct: 350 GMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEA-KGLKPDVVTYSTIISAYCKN 408
Query: 428 GKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
T +L M+ K L D TY+ +I LC + A++LFK MI + P
Sbjct: 409 CDTHSAF-ELNQQMLEKGVLP-DAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEF 466
Query: 488 TCRLILD 494
T ++D
Sbjct: 467 TYTSLID 473
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 162/336 (48%), Gaps = 8/336 (2%)
Query: 164 HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELAR 223
++VT NT+ R AG+ + A R + GL+ N T N +++ +CK GK+E AR
Sbjct: 184 NVVTYNTLVAAFFR---AGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDAR 240
Query: 224 SVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSY 282
VF E+ + + P+ ++N + G+CK EA EM G P V++++++I
Sbjct: 241 KVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVM 300
Query: 283 CRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDS 342
C+ N L+ +M+ +G N VT+T ++ K G ++A+ M+ KP
Sbjct: 301 CKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSV 360
Query: 343 RFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLE 402
+N LI R+ EA + EM G+ PD T++T+I+ + + AF + +
Sbjct: 361 VCYNALINGYCMVGRMDEARELLH-EMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQ 419
Query: 403 EMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC 462
+M + + P+ T+ L++ + + + L +M+ K L D TYT +I G C
Sbjct: 420 QMLE-KGVLPDAITYSSLIRVLCEEKRLSDA-HVLFKNMI-KLGLQPDEFTYTSLIDGHC 476
Query: 463 RANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQ 498
+ E A L +M+ + P T ++++ + +
Sbjct: 477 KEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSK 512
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 112/239 (46%), Gaps = 5/239 (2%)
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
G P V++Y+ ++ + + + D M + G PNV TY ++ L G +EA
Sbjct: 111 GYVPSVLAYNAVLLAL-SDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEA 169
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
+ I M+ G P+ +N L+ RA V A + + M + G+ P+ TFN+M+
Sbjct: 170 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGM-MLDGGLKPNLVTFNSMVN 228
Query: 387 MFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHH 446
G E A V +EM + E P+ +++ L+ K G + E LS + +M K
Sbjct: 229 GMCKAGKMEDARKVFDEMMR-EGLAPDGVSYNTLVGGYCKAGCSHEALS-VFAEMTQKGI 286
Query: 447 LSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
+ D+ T+T +IH +C+A EWA L ++M + T ++D +K D A
Sbjct: 287 MP-DVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDA 344
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 89/241 (36%), Gaps = 51/241 (21%)
Query: 160 MSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV 219
+ KG + T + ++R + DA F + GL+ + T L+D CKEG V
Sbjct: 422 LEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNV 481
Query: 220 ELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINR-------------------------- 252
E A S+ ++ K+ + P+ T+++ I+G K R
Sbjct: 482 ERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDAL 541
Query: 253 ------------------------VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
++EA Q M + YS +I +CR N
Sbjct: 542 MHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNV 601
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
K +M +G PN + +++ L ++G EA ++ +++ S D+ L
Sbjct: 602 MKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNCCSLADAEASKAL 661
Query: 349 I 349
I
Sbjct: 662 I 662
>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
Length = 475
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 183/389 (47%), Gaps = 23/389 (5%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAK-------VMRRFSGA 181
GY + M+++ L K ++ + + L+ M++ T++T A ++ A
Sbjct: 79 GYCPDMATHSMLINELCKADKIQEAQEFLQGMNR----TISTRASSCFSYNSLLNSLCKA 134
Query: 182 GQWEDAVRTFDEL-GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAH 238
+ A F + + + + ++L+D CK ++ A ++ ++ +C+P N
Sbjct: 135 KKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVP-NVT 193
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
T+N F++G + R+ +AQ +EM GC P VI+YST+I + + +EL + M
Sbjct: 194 TYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAM 253
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRV 358
++GC PN VTY ++ L K +EA + KM G PD + L+Y ++
Sbjct: 254 ISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKI 313
Query: 359 QEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFH 418
++AV V+ EM G PD +N ++ F G +A + + M E CKP+ + +
Sbjct: 314 EQAVEVFD-EMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRE-CKPDTVSHN 371
Query: 419 PLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
++ K + D+ + ++ + M H S D+ TY +I GLC + A +FKE+
Sbjct: 372 IMIDGLSKAKRLDDAV-EVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEID 430
Query: 479 GHDITPRYQTCRLILDEVKQKHMYDAAEK 507
++P ++L+ MY A K
Sbjct: 431 RLKLSPDPHAFNVLLEA-----MYAAGHK 454
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 176/344 (51%), Gaps = 19/344 (5%)
Query: 144 LGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKN 202
L K ++D +LLE M K G+ + T + ++ A + ++A G+ +
Sbjct: 59 LCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQ-----GMNRT 113
Query: 203 TET-------MNLLLDTLCKEGKVELARSVFLELKS--CIPPNAHTFNIFIHGWCKINRV 253
T N LL++LCK KV A ++F + S + P+ +++I I G+CKI+ +
Sbjct: 114 ISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDEL 173
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
A+ ++M C P V +Y+ + R+ + + +EM + GC P+V+TY+T+
Sbjct: 174 GRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTL 233
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
+ + + ++A + E M G +P++ +NCL++ L + S+ EA +++ +M E G
Sbjct: 234 IHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFR-KMVERG 292
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
PD T+ T++ F + G E+A V +EM H P+V ++ LLK F+ GK E
Sbjct: 293 CDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGH-DPDVVAYNCLLKGFFRAGKPGEA 351
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
QL MV++ D ++ ++I GL +A + + A +F+ M
Sbjct: 352 -RQLFQVMVSR-ECKPDTVSHNIMIDGLSKAKRLDDAVEVFERM 393
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 139/324 (42%), Gaps = 48/324 (14%)
Query: 202 NTETMNLLLDTLCKEGKVELA----RSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQ 257
N L LCK GK+E A R++ L S PP++ T + I CK RVD A
Sbjct: 10 NNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSAL 69
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM------QAQGC-------- 303
++ M G P + ++S +I C+ + E L M +A C
Sbjct: 70 SLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLN 129
Query: 304 ------------------------PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
P+VV+Y+ ++ K + A ++ ++M +
Sbjct: 130 SLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCV 189
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
P+ +N + L R R+ +A VY+ EM G +PD T++T+I FS H++A
Sbjct: 190 PNVTTYNAFLNGLMRKGRIADAQGVYE-EMISAGCSPDVITYSTLIHGFSLARKHDQAHE 248
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIH 459
+ E M C+PN T++ LL K K DE +L MV + D TYT +++
Sbjct: 249 LFEAMIS-RGCRPNAVTYNCLLHGLCKESKPDEA-HELFRKMVER-GCDPDKVTYTTLLY 305
Query: 460 GLCRANKCEWAYLLFKEMI--GHD 481
G C K E A +F EM+ GHD
Sbjct: 306 GFCNVGKIEQAVEVFDEMVSKGHD 329
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 140/290 (48%), Gaps = 14/290 (4%)
Query: 227 LELKSCIPPNAHTFNIFIHGWCKINRVD---EAQWTIQEMKGHGCHPCVISYSTIIQSYC 283
+ ++S P N + F+ G CK +++ EA T+QE P + ++IQ C
Sbjct: 1 MAVESKAPLNNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELC 60
Query: 284 RQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM-KIVGSKPDS 342
+ LL+ M +G P++ T++ +++ L K+ +EA + M + + ++ S
Sbjct: 61 KAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASS 120
Query: 343 RF-FNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF---SHHGHHEKAF 398
F +N L+ +L +A +V +A ++ + E V PD +++ +I F G EK +
Sbjct: 121 CFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLY 180
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
+ ++N C PNV T++ L + G+ + + ++M++ S D+ TY+ +I
Sbjct: 181 KQMIDLN----CVPNVTTYNAFLNGLMRKGRIADA-QGVYEEMISAG-CSPDVITYSTLI 234
Query: 459 HGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
HG A K + A+ LF+ MI P T +L + ++ D A ++
Sbjct: 235 HGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHEL 284
>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 784
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 187/374 (50%), Gaps = 6/374 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++D+L K ++++ R LL +M + G + NT ++ + G ++A + D +
Sbjct: 250 YNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMA 309
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVD 254
+ + T N+L+ LCK+GK++ A + E+++ + P+ T+N I+G +
Sbjct: 310 QNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSL 369
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
+ I +M+G G P ++Y+ +++ Y ++ L +M+ G P+ VT+ T++
Sbjct: 370 KGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLI 429
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
+ K+G EA R+ ++M G K +S N +++TL ++ +A Y + G
Sbjct: 430 NGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDA-YKLLSSASKRGY 488
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
D ++ T+I + G +A + +EM + E P++ T++ ++ +GKTD+ +
Sbjct: 489 FVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEII-PSIITYNTMIGGLCHSGKTDQSI 547
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
+L + + + L D TTY +I G CR + E A+ +M+ P TC ++L
Sbjct: 548 DKL--NELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLR 605
Query: 495 EVKQKHMYDAAEKI 508
+ + M D A K+
Sbjct: 606 GLCTEGMLDKALKL 619
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 185/380 (48%), Gaps = 18/380 (4%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK----GHIVTLNTIAKVMRRFSGAGQWEDAVRTF- 191
Y M++ L K ++D+ L +EM +VT NT+ +G +++ F
Sbjct: 320 YNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTL------INGCFDCSSSLKGFE 373
Query: 192 --DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWC 248
D++ G++ N T N+++ KEGK++ A + +++ S P+ TFN I+G+C
Sbjct: 374 LIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYC 433
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
K R+ EA + EM G ++ +TI+ + C + Y+LL +G + V
Sbjct: 434 KAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEV 493
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
+Y T++ K G EA+++ ++MK P +N +I L + + +++ E
Sbjct: 494 SYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLN-E 552
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
+ E+G+ PD +T+NT+I + G EKAF +M K + KP++ T + LL+ G
Sbjct: 553 LLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVK-KSFKPDLFTCNILLRGLCTEG 611
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
D+ L +L + ++K ++D TY +I GLC+ ++ E A+ L EM + P T
Sbjct: 612 MLDKAL-KLFNTWISKGK-AIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYT 669
Query: 489 CRLILDEVKQKHMYDAAEKI 508
IL + AE+
Sbjct: 670 YNAILSALADAGRMKEAEEF 689
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 136/299 (45%), Gaps = 24/299 (8%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
G + +S ++ L R++D LL SK G+ V + ++ + G+ +A
Sbjct: 452 GLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEA 511
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHG 246
++ +DE+ + + T N ++ LC GK + + EL +S + P+ T+N I G
Sbjct: 512 MKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILG 571
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
+C+ +V++A +M P + + + +++ C + K +L + ++G +
Sbjct: 572 YCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAID 631
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA----- 361
VTY T++S L K FEEA + +M+ PD +N ++ L A R++EA
Sbjct: 632 AVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMS 691
Query: 362 VYVYQVEMPENGVA-----------------PDTSTFNTMITMFSHHGHHEKAFHVLEE 403
V Q ++ + ++ P++ TF+ I G ++ A H+++E
Sbjct: 692 RIVEQGKLQDQTISLNKRKIESSSETSQESDPNSVTFSEQINELCTQGKYKDAMHMVQE 750
>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
Length = 399
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 142/278 (51%), Gaps = 9/278 (3%)
Query: 214 CKEGKVELARSVFLELKS--CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPC 271
C G+++ A + E++ + P +N F+H CK +V EA ++ MK C P
Sbjct: 29 CLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPD 88
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
V++++T+I C+ + ++LDEM+ G N+VTY T+++ L+ +G EA+ + +
Sbjct: 89 VVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQ 148
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN-GVAPDTSTFNTMITMFSH 390
M + PD++ +N +I+ ++ + A Y + EM + G +PDT T++ +I
Sbjct: 149 GMT---TTPDTQTYNAIIHGFCKSGEIDRA-YGFLEEMKQRAGCSPDTFTYSILINGLCK 204
Query: 391 HGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLD 450
+ KA +L+EM + C +V F+ L+ K D +LL M+ +H + D
Sbjct: 205 SSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRA-RELLSSML-EHGCAPD 262
Query: 451 ITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ TY+ +I GLCR + + L ++M+ P T
Sbjct: 263 VVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVT 300
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 149/337 (44%), Gaps = 13/337 (3%)
Query: 101 YLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM 160
Y V H + ++A+ + R PG + +Y V L K ++ + +++ M
Sbjct: 21 YFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNM 80
Query: 161 SKG----HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKE 216
G +VT NT+ + AG+ ++A + DE+ G N T N L++ L
Sbjct: 81 KDGACKPDVVTFNTL---IAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSA 137
Query: 217 GKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH-GCHPCVISY 275
G+ +V + P+ T+N IHG+CK +D A ++EMK GC P +Y
Sbjct: 138 GRS--GEAVLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTY 195
Query: 276 STIIQSYCRQYNFSKVYELLDEMQA-QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
S +I C+ N K ELL EM + C +VV + T++ K+ D + A + M
Sbjct: 196 SILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSML 255
Query: 335 IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHH 394
G PD ++ +I L R V + + + +M G PD T+ ++T G
Sbjct: 256 EHGCAPDVVTYSTIIDGLCRCGDVDKGFALLE-KMVSRGCKPDVVTYTVLVTGLCKAGKM 314
Query: 395 EKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
+A +++ M + + C PN T+ + K K D
Sbjct: 315 VEACRLVKRMLE-DGCTPNAVTYSLVFDGLCKIDKLD 350
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 137/302 (45%), Gaps = 43/302 (14%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
+ ++ L K ++D+ + +L+EM + G L T ++ S AG+ +AV +
Sbjct: 92 FNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMT 151
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK--SCIPPNAHTFNIFIHGWCKINRV 253
T +T+T N ++ CK G+++ A E+K + P+ T++I I+G CK + +
Sbjct: 152 T---TPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNL 208
Query: 254 DEAQWTIQEMKG------------------------------------HGCHPCVISYST 277
+A +QEM G HGC P V++YST
Sbjct: 209 RKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYST 268
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
II CR + K + LL++M ++GC P+VVTYT +++ L K+G EA R+ ++M G
Sbjct: 269 IIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDG 328
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKA 397
P++ ++ + L + ++ A + + + G D F ++ A
Sbjct: 329 CTPNAVTYSLVFDGLCKIDKLDMANDLL-TSIRDKGRITDVVAFEALLLSVKKRLLDRAA 387
Query: 398 FH 399
F
Sbjct: 388 FQ 389
>gi|357469235|ref|XP_003604902.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505957|gb|AES87099.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 449
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 187/382 (48%), Gaps = 19/382 (4%)
Query: 115 KSALGI--FRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-----GHIVT 167
+S LG+ F WAG GY HS +Y + ++ ++D+ ++ ++ K G +V
Sbjct: 49 QSQLGVRFFIWAGFQSGYRHSGYMYRKVCNLF----EIDKNPEIICDVIKAYEVDGCVVN 104
Query: 168 LNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFL 227
+N +V++ A + + ++ F ++ +T N+++ +CK+G VE+ +
Sbjct: 105 VNMFREVLKLCKEAENVDLGLWVLRKMEDFEMKPDTVMYNVVIKLVCKQGDVEMGEKLMK 164
Query: 228 ELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQY 286
++ + I P+ T+ I G C R++EA ++ M+G+GC P + S ++ CR
Sbjct: 165 DMSLNGICPDLITYMTMIEGLCSAGRLEEAYEMVKVMRGNGCSPNSVVLSAVLDGLCRLD 224
Query: 287 NFSKVYELLDEMQAQG-CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFF 345
+ + ELLDEM+ G C PNVVTYT+++ K G++ EA+ I ++M+ G +
Sbjct: 225 SMERALELLDEMEKSGDCCPNVVTYTSLIQSFCKRGEWTEALNILDRMRAFGCFANHVTV 284
Query: 346 NCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMN 405
LI +L RV EA V + E+ V+ +N+++ F E A ++ +EM
Sbjct: 285 FTLIESLCTEGRVDEAYKVVDKLVVEHCVSRG-DCYNSLVISFIRVKKLEGAENLFKEML 343
Query: 406 KLEHCKPNVQTFHPLLKS-CFKTGKTDECLSQLLDDMVNKHHL-SLDITTYTLVIHGLCR 463
E KP+ LLK C K D LLD + N L S+D Y++++ GL +
Sbjct: 344 AAE-IKPDTLASSLLLKELCLKDRVLDG--FYLLDTIENMGFLSSIDSDIYSIMLIGLWQ 400
Query: 464 ANKCEWAYLLFKEMIGHDITPR 485
N A L K M+ I R
Sbjct: 401 KNHLTEATKLAKIMLKKAIPLR 422
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 132/270 (48%), Gaps = 6/270 (2%)
Query: 228 ELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYN 287
E+ C+ N + F + + VD W +++M+ P + Y+ +I+ C+Q +
Sbjct: 97 EVDGCVV-NVNMFREVLKLCKEAENVDLGLWVLRKMEDFEMKPDTVMYNVVIKLVCKQGD 155
Query: 288 FSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNC 347
+L+ +M G P+++TY T++ L +G EEA + + M+ G P+S +
Sbjct: 156 VEMGEKLMKDMSLNGICPDLITYMTMIEGLCSAGRLEEAYEMVKVMRGNGCSPNSVVLSA 215
Query: 348 LIYTLGRASRVQEAVYVYQVEMPENG-VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNK 406
++ L R ++ A+ + EM ++G P+ T+ ++I F G +A ++L+ M
Sbjct: 216 VLDGLCRLDSMERALELLD-EMEKSGDCCPNVVTYTSLIQSFCKRGEWTEALNILDRMRA 274
Query: 407 LEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANK 466
C N T L++S G+ DE +++D +V +H +S +LVI + R K
Sbjct: 275 F-GCFANHVTVFTLIESLCTEGRVDEAY-KVVDKLVVEHCVSRGDCYNSLVISFI-RVKK 331
Query: 467 CEWAYLLFKEMIGHDITPRYQTCRLILDEV 496
E A LFKEM+ +I P L+L E+
Sbjct: 332 LEGAENLFKEMLAAEIKPDTLASSLLLKEL 361
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 63/135 (46%), Gaps = 7/135 (5%)
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
+ + Y+V+ G + + F ++ + + + VL +M E KP+ ++
Sbjct: 91 DVIKAYEVD----GCVVNVNMFREVLKLCKEAENVDLGLWVLRKMEDFEM-KPDTVMYNV 145
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
++K K G E +L+ DM + + + D+ TY +I GLC A + E AY + K M G
Sbjct: 146 VIKLVCKQGDV-EMGEKLMKDM-SLNGICPDLITYMTMIEGLCSAGRLEEAYEMVKVMRG 203
Query: 480 HDITPRYQTCRLILD 494
+ +P +LD
Sbjct: 204 NGCSPNSVVLSAVLD 218
>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g16710, mitochondrial; Flags: Precursor
gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 507
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 173/356 (48%), Gaps = 5/356 (1%)
Query: 160 MSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV 219
M G L T ++ + + EDA+ FD++ G + N T L+ LCK +
Sbjct: 145 MKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHL 204
Query: 220 ELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTI 278
A +F ++ + PN T+N + G C+I R +A W +++M P VI+++ +
Sbjct: 205 NHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTAL 264
Query: 279 IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
I ++ + + EL + M P+V TY ++++ L G +EA ++ M+ G
Sbjct: 265 IDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGC 324
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
P+ + LI+ ++ RV++ + ++ EM + GV +T T+ +I + G + A
Sbjct: 325 YPNEVIYTTLIHGFCKSKRVEDGMKIFY-EMSQKGVVANTITYTVLIQGYCLVGRPDVAQ 383
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
V +M+ P+++T++ LL GK ++ L ++ + + K + ++I TYT++I
Sbjct: 384 EVFNQMSS-RRAPPDIRTYNVLLDGLCCNGKVEKAL--MIFEYMRKREMDINIVTYTIII 440
Query: 459 HGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
G+C+ K E A+ LF + + P T ++ ++ + A+ + MK+
Sbjct: 441 QGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKE 496
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 167/349 (47%), Gaps = 14/349 (4%)
Query: 168 LNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFL 227
L+ IAK+ R ++ + F+++ G+ T N+++ +C + A S FL
Sbjct: 90 LSVIAKMNR-------YDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRA-SCFL 141
Query: 228 E--LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQ 285
+K P+ TF ++G+C NR+++A ++ G G P V++Y+T+I+ C+
Sbjct: 142 GKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKN 201
Query: 286 YNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFF 345
+ + EL ++M G PNVVTY +++ L + G + +A + M +P+ F
Sbjct: 202 RHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITF 261
Query: 346 NCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMN 405
LI + ++ EA +Y V M + V PD T+ ++I +G ++A + M
Sbjct: 262 TALIDAFVKVGKLMEAKELYNV-MIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLME 320
Query: 406 KLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRAN 465
+ C PN + L+ K+ + ++ + ++ +M K ++ + TYT++I G C
Sbjct: 321 R-NGCYPNEVIYTTLIHGFCKSKRVEDGM-KIFYEMSQKGVVA-NTITYTVLIQGYCLVG 377
Query: 466 KCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
+ + A +F +M P +T ++LD + + A I M+K
Sbjct: 378 RPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRK 426
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 88/165 (53%), Gaps = 1/165 (0%)
Query: 178 FSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPN 236
F + + ED ++ F E+ G+ NT T +L+ C G+ ++A+ VF ++ S PP+
Sbjct: 338 FCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPD 397
Query: 237 AHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLD 296
T+N+ + G C +V++A + M+ +++Y+ IIQ C+ ++L
Sbjct: 398 IRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFC 457
Query: 297 EMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPD 341
+ ++G PNV+TYTT++S + G EA + +KMK G P+
Sbjct: 458 SLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPN 502
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 115/243 (47%), Gaps = 4/243 (1%)
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYEL 294
P+ F + K+NR D ++M+ G P + + + ++ C +
Sbjct: 81 PSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCF 140
Query: 295 LDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGR 354
L +M G P++VT+T++++ E+AI + +++ +G KP+ + LI L +
Sbjct: 141 LGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCK 200
Query: 355 ASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNV 414
+ AV ++ +M NG P+ T+N ++T G A +L +M K +PNV
Sbjct: 201 NRHLNHAVELFN-QMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMK-RRIEPNV 258
Query: 415 QTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLF 474
TF L+ + K GK E ++ L +++ + + D+ TY +I+GLC + A +F
Sbjct: 259 ITFTALIDAFVKVGKLME--AKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMF 316
Query: 475 KEM 477
M
Sbjct: 317 YLM 319
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 108/247 (43%), Gaps = 3/247 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVT-LNTIAKVMRRFSGAGQWEDAVRTFDELG 195
+ ++D KV ++ + + L M + + + T ++ G ++A + F +
Sbjct: 261 FTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLME 320
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
G N L+ CK +VE +F E+ + + N T+ + I G+C + R D
Sbjct: 321 RNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPD 380
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
AQ +M P + +Y+ ++ C K + + M+ + N+VTYT ++
Sbjct: 381 VAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIII 440
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
+ K G E+A + + G KP+ + +I R + EA +++ +M E+G
Sbjct: 441 QGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFK-KMKEDGF 499
Query: 375 APDTSTF 381
P+ S +
Sbjct: 500 LPNESVY 506
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 110/234 (47%), Gaps = 5/234 (2%)
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
SY I+++ F+ +L M P+++ +T ++S +AK ++ I + E+M
Sbjct: 50 SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
+I+G P N +++ + +S+ A + +M + G PD TF +++ + H
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRAS-CFLGKMMKLGFEPDLVTFTSLLNGYCHWNR 168
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
E A + +++ + KPNV T+ L++ K + + +L + M + ++ T
Sbjct: 169 IEDAIALFDQILGMGF-KPNVVTYTTLIRCLCKNRHLNHAV-ELFNQM-GTNGSRPNVVT 225
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE-VKQKHMYDAAE 506
Y ++ GLC + A L ++M+ I P T ++D VK + +A E
Sbjct: 226 YNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKE 279
>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
Length = 399
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 142/278 (51%), Gaps = 9/278 (3%)
Query: 214 CKEGKVELARSVFLELKS--CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPC 271
C G+++ A + E++ + P +N F+H CK +V EA ++ MK C P
Sbjct: 29 CLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPD 88
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
V++++T+I C+ + ++LDEM+ G N+VTY T+++ L+ +G EA+ + +
Sbjct: 89 VVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQ 148
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN-GVAPDTSTFNTMITMFSH 390
M + PD++ +N +I+ ++ + A Y + EM + G +PDT T++ +I
Sbjct: 149 GMT---TTPDTQTYNAIIHGFCKSGEIDRA-YGFLEEMKQRAGCSPDTFTYSILINGLCK 204
Query: 391 HGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLD 450
+ KA +L+EM + C +V F+ L+ K D +LL M+ +H + D
Sbjct: 205 SSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRA-RELLSSML-EHGCAPD 262
Query: 451 ITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ TY+ +I GLCR + + L ++M+ P T
Sbjct: 263 VVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVT 300
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 162/364 (44%), Gaps = 14/364 (3%)
Query: 101 YLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM 160
Y V H + ++A+ + R PG + +Y V L K ++ + +++ M
Sbjct: 21 YFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNM 80
Query: 161 SKG----HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKE 216
G +VT NT+ + AG+ ++A + DE+ G N T N L++ L
Sbjct: 81 KDGACKPDVVTFNTL---IAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSA 137
Query: 217 GKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH-GCHPCVISY 275
G+ +V + P+ T+N IHG+CK +D A ++EMK GC P +Y
Sbjct: 138 GRS--GEAVLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTY 195
Query: 276 STIIQSYCRQYNFSKVYELLDEMQA-QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
S +I C+ N K ELL EM + C +VV + T++ K+ D + A + M
Sbjct: 196 SILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSML 255
Query: 335 IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHH 394
G PD ++ +I L R V + + + +M G PD T+ ++T G
Sbjct: 256 EHGCAPDVVTYSTIIDGLCRCGDVDKGFALLE-KMVSRGCKPDVVTYTVLVTGLCKAGKM 314
Query: 395 EKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTY 454
+A +++ M + + C PN T+ + K K D + LL + +K ++ +
Sbjct: 315 VEACRLVKRMLE-DGCTPNAVTYSLVFDGLCKIDKLDMA-NDLLTSIRDKGRVTDVVAFE 372
Query: 455 TLVI 458
TL++
Sbjct: 373 TLLL 376
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 123/310 (39%), Gaps = 77/310 (24%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
+ ++ L K ++D+ + +L+EM + G L T ++ S AG+ +AV +
Sbjct: 92 FNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMT 151
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK--SCIPPNAHTFNIFIHGWCKINRV 253
T +T+T N ++ CK G+++ A E+K + P+ T++I I+G CK + +
Sbjct: 152 T---TPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNL 208
Query: 254 DEAQWTIQEMKG------------------------------------HGCHPCVISYST 277
+A +QEM G HGC P V++YST
Sbjct: 209 RKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYST 268
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGC---------------------------------- 303
II CR + K + LL++M ++GC
Sbjct: 269 IIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDG 328
Query: 304 -PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
PN VTY+ V L K + A + ++ G D F L+ ++ + + A
Sbjct: 329 CTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLLLSVKKRLLDRAAF 388
Query: 363 YVYQVEMPEN 372
+++E N
Sbjct: 389 QKWKLETSIN 398
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 128/516 (24%), Positives = 228/516 (44%), Gaps = 40/516 (7%)
Query: 14 IPLNPLTSRIRFHS---SSENCSHIVSSSPIESYCSDGARLDHHQVLCVDSPRLPDIDV- 69
+P PL R+R + S E C+ ++S P++ ++ Q LPD +V
Sbjct: 217 LPSAPLLRRVRQYGISPSPEACNAVLSRLPLDE------AIELFQ-------GLPDKNVC 263
Query: 70 ---IISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGS 126
I+ KV G+ E + L + A P LIH + ALG A
Sbjct: 264 SYNILLKVLCGAGRVEDARQLFDEM---ASPPDVVTYGILIHGY-----CALGELENAVK 315
Query: 127 ------CPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTI-AKVMRRFS 179
G E ++ +Y +V +L ++ ++E+M ++ + V+ F
Sbjct: 316 LLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFC 375
Query: 180 GAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAH 238
G A R FDE+ GL + T L++ LC+ G+++ A V E L + +
Sbjct: 376 NKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEV 435
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
T+ + + G+CK ++ EA M G P V++Y+ + C+Q + ELL EM
Sbjct: 436 TYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEM 495
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRV 358
+G N TY ++++ L K+G ++A+R M G KPD + LI L ++ +
Sbjct: 496 SNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGEL 555
Query: 359 QEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFH 418
A + Q EM +NG+ P T+N ++ F G E +LE M + ++ PN T++
Sbjct: 556 DRAHDLLQ-EMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLE-KNIHPNATTYN 613
Query: 419 PLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
L+K + G + +++ M +++ + + TY ++I G C+A + A EMI
Sbjct: 614 SLMKQ-YCIGNNMKSTTEIYKGMCSRN-VEPNENTYNILIKGHCKARSMKEAQYFHNEMI 671
Query: 479 GHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
+ ++ + +K + A K+ M+K
Sbjct: 672 EKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRK 707
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 109/239 (45%), Gaps = 3/239 (1%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTF 240
G + A E+ GLE N T N L++ LCK G ++ A ++ + + P+ +T+
Sbjct: 483 GDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTY 542
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
I CK +D A +QEM +G P +++Y+ ++ +C +LL+ M
Sbjct: 543 TTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLE 602
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
+ PN TY ++M + + I + M +P+ +N LI +A ++E
Sbjct: 603 KNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKE 662
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH-CKPNVQTFH 418
A Y + EM E G S+++ +I + + +A + +M K +P+V F+
Sbjct: 663 AQYFHN-EMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFY 720
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 94/210 (44%), Gaps = 5/210 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++D L K ++D+ LL+EM G T+ T +M F +G+ E + + +
Sbjct: 542 YTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWML 601
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVD 254
+ N T N L+ C ++ ++ + S + PN +T+NI I G CK +
Sbjct: 602 EKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMK 661
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EAQ+ EM G SYS +I+ ++ F + +L +M+ +G Y +
Sbjct: 662 EAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYI 721
Query: 315 SYLAKSGDFEEAIRITEKM---KIVGSKPD 341
+ + E + + +++ IV SK +
Sbjct: 722 DFNFNEDNLEATLALCDELVEASIVKSKAE 751
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 99/226 (43%), Gaps = 2/226 (0%)
Query: 126 SCPGYEHSSEIYEMMVDILGKVRQMDQ-MRALLEEMSKGHIVTLNTIAKVMRRFSGAGQW 184
S G E ++ Y +++ L K +DQ MR + + + G + T ++ +G+
Sbjct: 496 SNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGEL 555
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIF 243
+ A E+ G++ T N+L++ C G+VE + + L+ I PNA T+N
Sbjct: 556 DRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSL 615
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
+ +C N + + M P +Y+ +I+ +C+ + + +EM +G
Sbjct: 616 MKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGF 675
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
+Y+ ++ L K F EA ++ M+ G + +N I
Sbjct: 676 RLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYI 721
>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 920
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/409 (25%), Positives = 186/409 (45%), Gaps = 24/409 (5%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS 161
L+ + R + D +AL +FR A S P ++ ++ IL + R+ RALL +
Sbjct: 72 LLQAALRRVRLDPDAALHLFRLAPSRPSLVSHAQ----LLHILARARRFHDARALLSSLP 127
Query: 162 KGHIVTLNTIAKVMRRF--------------SGAGQWEDAVRTFDELGTFGLEKNTETMN 207
+A+V R F + AGQ A+ FD +G G + + N
Sbjct: 128 PHAEPLFPHLAEVYRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCN 187
Query: 208 LLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
LL+ L + G +A V+ +++ + + P+ T I +C+ RV +A ++EM+G
Sbjct: 188 RLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGM 247
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
G +++Y ++ YC +L+ +Q +G PNVVTYT ++ K G EEA
Sbjct: 248 GLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEA 307
Query: 327 IRITEKMKIVGS-KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMI 385
R+ ++MK G D + +I + R+ +A V EM + G+ + +NTMI
Sbjct: 308 ERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRN-EMRDAGIHVNLFVYNTMI 366
Query: 386 TMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKH 445
G E+ VL+EM + +P+ +++ L+ + G + + M+ ++
Sbjct: 367 NGLCKLGRMEEVQKVLQEMEDV-GMRPDKYSYNTLIDGYCREGSMRKAFE--MCRMMVRN 423
Query: 446 HLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
L+ TY ++ G C + + A L+ M+ + P +C +LD
Sbjct: 424 GLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLD 472
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 127/510 (24%), Positives = 208/510 (40%), Gaps = 92/510 (18%)
Query: 78 SSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSAL--GIFRWAGSCPGYEHSSE 135
SS VF + + +++ + L+NKL+ D +A+ G R AG P
Sbjct: 165 SSALNVFDGMGKVGCRPSLRSCNRLLNKLVQS-GDPGMAAMVYGQMRIAGVLPD------ 217
Query: 136 IYEMMVDILGKVRQMD----QMRALLEEMSKGHIVTLNTIA--KVMRRFSGAGQWEDAVR 189
E V I+ K D Q +EEM +G + +N +A VM + G G EDA R
Sbjct: 218 --EFTVAIMAKAYCRDGRVAQAVEFVEEM-EGMGLEVNLVAYHAVMDCYCGMGWTEDARR 274
Query: 190 TFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK------------------- 230
+ L GL N T LL+ CK+G++E A V E+K
Sbjct: 275 ILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGY 334
Query: 231 ------------------SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCV 272
+ I N +N I+G CK+ R++E Q +QEM+ G P
Sbjct: 335 CQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDK 394
Query: 273 ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEK 332
SY+T+I YCR+ + K +E+ M G +TY T++ ++A+R+
Sbjct: 395 YSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFL 454
Query: 333 MKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
M G P+ + L+ L +A + ++A+ +++ E G+A + TFNT+I G
Sbjct: 455 MLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWK-ETLARGLAKNVITFNTVINGLCKIG 513
Query: 393 HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDM----------- 441
+A +L+ M +L C P+ T+ L K G+ + L++ M
Sbjct: 514 RMAEAEELLDRMKEL-RCPPDSLTYRTLFDGYCKLGQLGTA-THLMNKMEHLGFAPSVEM 571
Query: 442 ----------------VNKHH-------LSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
VN H LS ++ TY +I G C+ A L+ EM+
Sbjct: 572 FNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMV 631
Query: 479 GHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+ + P C ++ ++ D A +
Sbjct: 632 NNGMNPNVFICSALMSCFYKEGKVDEANLV 661
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 160/358 (44%), Gaps = 29/358 (8%)
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHT 239
AG+ E A+ + E GL KN T N +++ LCK G++ A + +K PP++ T
Sbjct: 477 AGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLT 536
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+ G+CK+ ++ A + +M+ G P V +++ I + + KV ++ EM
Sbjct: 537 YRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMS 596
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
A+G PN+VTY +++ K G+ EA + +M G P+ + L+ + +V
Sbjct: 597 ARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVD 656
Query: 360 EAVYVYQ---------------VEMPENGVAPDTST----------FNTMITMFSHHGHH 394
EA V Q +E+ + DT +N +I G
Sbjct: 657 EANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRI 716
Query: 395 EKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTY 454
A + E + + P+ T+ L+ C +G DE S L D++ L+ +I TY
Sbjct: 717 ADAKSLFESLRN-KRFLPDNFTYSSLIHGCAASGSIDEAFS--LRDVMLSAGLTPNIITY 773
Query: 455 TLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
+I+GLC++ K A LF ++ I+P T ++DE ++ A K++ M
Sbjct: 774 NSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKM 831
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 94/404 (23%), Positives = 169/404 (41%), Gaps = 30/404 (7%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
+Y M++ L K+ +M++++ +L+EM G + ++ + G A +
Sbjct: 361 VYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMM 420
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELA-RSVFLELKSCIPPNAHTFNIFIHGWCKINRV 253
GL T T N LL C ++ A R FL LK + PN + + + G K +
Sbjct: 421 VRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKT 480
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
++A +E G VI+++T+I C+ ++ ELLD M+ CPP+ +TY T+
Sbjct: 481 EQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTL 540
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
K G A + KM+ +G P FN I A + + ++ EM G
Sbjct: 541 FDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHS-EMSARG 599
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
++P+ T+ +I + G+ +A ++ EM PNV L+ +K GK DE
Sbjct: 600 LSPNLVTYGALIAGWCKEGNLHEACNLYFEMVN-NGMNPNVFICSALMSCFYKEGKVDEA 658
Query: 434 -------------------------LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
+S ++D + + + S ++ + ++I GLC++ +
Sbjct: 659 NLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANV-MWNVIIFGLCKSGRIA 717
Query: 469 WAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
A LF+ + P T ++ D A + VM
Sbjct: 718 DAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVM 761
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 140/324 (43%), Gaps = 50/324 (15%)
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHT 239
A QW E+ GL N T L+ CKEG + A +++ E+ + + PN
Sbjct: 582 AKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFI 641
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKG----HGC----------------------HPCVI 273
+ + + K +VDEA +Q++ GC H +
Sbjct: 642 CSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANV 701
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
++ II C+ + L + ++ + P+ TY++++ A SG +EA + + M
Sbjct: 702 MWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVM 761
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
G P+ +N LIY L ++ ++ AV ++ ++ G++P+ T+NT+I + G
Sbjct: 762 LSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFN-KLQSKGISPNGITYNTLIDEYCKEGK 820
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
+AF + ++M + G +E + +LLD M+ ++++ + T
Sbjct: 821 TTEAFKLKQKM--------------------VEEGYMEEAI-KLLDQMI-ENNVDPNYIT 858
Query: 454 YTLVIHGLCRANKCEWAYLLFKEM 477
Y +IHG ++ E L+ EM
Sbjct: 859 YCTLIHGYIKSGNMEEISKLYDEM 882
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 22/221 (9%)
Query: 129 GYEHSSEI-YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLN-TIAKVMRRFSGAGQWED 186
G HS+ + + +++ L K ++ ++L E + + N T + ++ + +G ++
Sbjct: 694 GNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDE 753
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIH 245
A D + + GL N T N L+ LCK GK+ A ++F +L+S I PN T+N I
Sbjct: 754 AFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLID 813
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
+CK + EA Q+M G + +LLD+M P
Sbjct: 814 EYCKEGKTTEAFKLKQKMVEEG-------------------YMEEAIKLLDQMIENNVDP 854
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFN 346
N +TY T++ KSG+ EE ++ ++M I G P + N
Sbjct: 855 NYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTNWIGN 895
>gi|255660934|gb|ACU25636.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
Length = 484
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 193/389 (49%), Gaps = 14/389 (3%)
Query: 100 HYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEE 159
H LV ++H K + AL FRW +EH+ E + +++ILG+ +++ R +L +
Sbjct: 12 HELVYNVLHGSKKS-EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLD 70
Query: 160 MSKGHIVTLNTIAKVM-RRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK 218
M K + + +M + AG +++V+ F ++ G+E+ ++ + L + + G+
Sbjct: 71 MPKKGLEWDEDLWVLMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGR 130
Query: 219 VELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
+A+ F + L I P HTFN+ I G+ +V+ A ++MK P VI+Y+T
Sbjct: 131 YMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLCGKVETANRFFEDMKXREISPDVITYNT 190
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+I Y R + + EM+ + P VVTYTT++ ++A+ + E+MK G
Sbjct: 191 MINGYYRVKKIEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDALTLLEEMKGFG 250
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP-DTSTFNTMITMFSHHGHHEK 396
KP++ ++ L+ L A ++ EA + + EM + +AP D S F +I+ G+ +
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMSEASGILK-EMVDKYIAPKDNSIFLRLISGQCKAGNLDA 309
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK-------HHLSL 449
A VL+ M +L + L+++ K G ++ + +LLD ++ K L +
Sbjct: 310 AADVLKAMIRLS-VPTEAGHYGVLIENYCKAGDYEKAI-KLLDKLIEKDIVLRPQSSLHM 367
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMI 478
+ + Y ++ LC + A L ++++
Sbjct: 368 EPSAYNPLVEYLCNNGQTAKAETLVRQLM 396
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 126/267 (47%), Gaps = 6/267 (2%)
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
+ ++++ A+ + +M G + +I SY + + +L +M+ G +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDLWVLMIDSYGKAGIVQESVKLFQKMEELGVERTIK 116
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
+Y + + + G + A R KM G +P FN +I+ +V+ A ++ +
Sbjct: 117 SYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLCGKVETANRFFE-D 175
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M ++PD T+NTMI + E+A EM K + +P V T+ L+K
Sbjct: 176 MKXREISPDVITYNTMINGYYRVKKIEEAEKYFVEM-KGRNIEPTVVTYTTLIKGYVSVD 234
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
+ D+ L+ LL++M + + TY+ ++ GLC A K A + KEM+ I P+ +
Sbjct: 235 RVDDALT-LLEEM-KGFGIKPNAITYSTLLPGLCNAEKMSEASGILKEMVDKYIAPKDNS 292
Query: 489 --CRLILDEVKQKHMYDAAEKIEAVMK 513
RLI + K ++ AA+ ++A+++
Sbjct: 293 IFLRLISGQCKAGNLDAAADVLKAMIR 319
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 121/294 (41%), Gaps = 46/294 (15%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y M++ +V+++++ EM +I T+ T +++ + + +DA+ +E+
Sbjct: 188 YNTMINGYYRVKKIEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDALTLLEEMK 247
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRV 253
FG++ N T + LL LC K+ A + E+ K P + F I G CK +
Sbjct: 248 GFGIKPNAITYSTLLPGLCNAEKMSEASGILKEMVDKYIAPKDNSIFLRLISGQCKAGNL 307
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC---PPNVV-- 308
D A ++ M Y +I++YC+ ++ K +LLD++ + P + +
Sbjct: 308 DAAADVLKAMIRLSVPTEAGHYGVLIENYCKAGDYEKAIKLLDKLIEKDIVLRPQSSLHM 367
Query: 309 ---TYTTVMSYLAKSGDFEEAIRITEKMKIVG-----------------SKPDSRF---- 344
Y ++ YL +G +A + ++ +G PDS F
Sbjct: 368 EPSAYNPLVEYLCNNGQTAKAETLVRQLMKLGVQDPTALNTLIRGHSQEGSPDSAFELLK 427
Query: 345 -------------FNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMI 385
++ L+ + + S +A M ENG PD+S F +++
Sbjct: 428 IMLRRKIDSEKSSYDSLVQSYLKKSEPADAKAALD-SMIENGHLPDSSLFRSVM 480
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 82/179 (45%), Gaps = 4/179 (2%)
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N T+ ++ L ++ A I M G + D + +I + G+A VQE+V ++
Sbjct: 44 NRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDLWVLMIDSYGKAGIVQESVKLF 103
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
Q +M E GV +++ + + G + A +M E +P TF+ ++ F
Sbjct: 104 Q-KMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLS-EGIEPTRHTFNVMIWGFF 161
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
GK E ++ +DM +S D+ TY +I+G R K E A F EM G +I P
Sbjct: 162 LCGKV-ETANRFFEDM-KXREISPDVITYNTMINGYYRVKKIEEAEKYFVEMKGRNIEP 218
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 59/152 (38%), Gaps = 8/152 (5%)
Query: 174 VMRRFSGAGQWEDAVRTFDEL--------GTFGLEKNTETMNLLLDTLCKEGKVELARSV 225
++ + AG +E A++ D+L L N L++ LC G+ A ++
Sbjct: 332 LIENYCKAGDYEKAIKLLDKLIEKDIVLRPQSSLHMEPSAYNPLVEYLCNNGQTAKAETL 391
Query: 226 FLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQ 285
+L + N I G + D A ++ M SY +++QSY ++
Sbjct: 392 VRQLMKLGVQDPTALNTLIRGHSQEGSPDSAFELLKIMLRRKIDSEKSSYDSLVQSYLKK 451
Query: 286 YNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
+ LD M G P+ + +VM L
Sbjct: 452 SEPADAKAALDSMIENGHLPDSSLFRSVMESL 483
>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
Length = 833
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 177/366 (48%), Gaps = 43/366 (11%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++D L K + +D+ +A+ ++M KG + T ++ + G+W++ VR +E+
Sbjct: 342 YNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMS 401
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVD 254
T LE + LLLD LCK G+ AR++F ++ I P+A +D
Sbjct: 402 THDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVIRKGIKPDAM--------------ID 447
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCR---------QYN--------------FSKV 291
EA +M+ G P V++Y +I + C+ ++N + K
Sbjct: 448 EAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKA 507
Query: 292 YELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYT 351
EL+ EM QG +VV + T+M L + G EA R+ E M VG +PD +N L+
Sbjct: 508 EELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDG 567
Query: 352 LGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCK 411
R EA + V M G+ P+ T+NT++ + + A+ +L EM +
Sbjct: 568 HCLTGRTDEAAKLLDV-MVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREM-LMNGPT 625
Query: 412 PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAY 471
P+V T++ +L F+TG+ E +L +M+N D+ TY ++++GLC+ N + A+
Sbjct: 626 PDVVTYNTILHGLFQTGRFSEA-KELYLNMINSRT-QWDMYTYNIILNGLCKNNCVDEAF 683
Query: 472 LLFKEM 477
+F+ +
Sbjct: 684 KMFQSL 689
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 179/393 (45%), Gaps = 55/393 (13%)
Query: 164 HIVTLNTIAKVMRRFSGAGQWEDAVRTF----DELGTFGLEKNTETMNLLLDTLCKEGKV 219
++V+ NT+ K F + E+A+ D+ G + + N +++ +EG+V
Sbjct: 265 NVVSYNTLVK---GFCNENRAEEALELLHVMADDQG-LSCPPDVVSYNTVINGFFREGQV 320
Query: 220 ELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTI 278
+ A ++FL++ IPP+ T+N I G CK VD A+ Q+M G P +Y+ +
Sbjct: 321 DKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCL 380
Query: 279 IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGD---------------- 322
I Y + +V LL+EM P+ Y ++ YL K+G
Sbjct: 381 IHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVIRKGI 440
Query: 323 -----FEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ----------- 366
+EA+ I +KM+ G P+ + LI L + RV +A+ +
Sbjct: 441 KPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINEVYGLCT 500
Query: 367 -----------VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQ 415
EM + G+ D FNT++ G +A ++E M ++ +P+V
Sbjct: 501 VEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRV-GVRPDVI 559
Query: 416 TFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFK 475
+++ L+ TG+TDE ++LLD MV+ L + TY ++HG C+A + + AY L +
Sbjct: 560 SYNTLVDGHCLTGRTDEA-AKLLDVMVSI-GLKPNEFTYNTLLHGYCKARRIDDAYSLLR 617
Query: 476 EMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
EM+ + TP T IL + Q + A+++
Sbjct: 618 EMLMNGPTPDVVTYNTILHGLFQTGRFSEAKEL 650
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 143/298 (47%), Gaps = 26/298 (8%)
Query: 205 TMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRVDEA-QWTIQE 262
T ++L+ C+ G++E +VF L LK+ N FN + G C R+DEA +
Sbjct: 197 TYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNILLWR 256
Query: 263 MKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM---QAQGCPPNVVTYTTVMSYLAK 319
M GC P V+SY+T+++ +C + + ELL M Q CPP+VV+Y TV++ +
Sbjct: 257 MPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVINGFFR 316
Query: 320 SGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTS 379
G ++A + +M G PD +N +I L +A V A V+Q +M + GV P
Sbjct: 317 EGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQ-QMLDKGVKPSNG 375
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS---- 435
T+N +I + G ++ +LEEM+ +P+ + LL K G+ E +
Sbjct: 376 TYNCLIHGYLSTGKWKEVVRLLEEMST-HDLEPDCFIYALLLDYLCKNGRCTEARNIFDS 434
Query: 436 ---------QLLD------DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
++D D + + LS ++ Y +I LC+ + + A L F +MI
Sbjct: 435 VIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMI 492
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 168/389 (43%), Gaps = 52/389 (13%)
Query: 165 IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARS 224
+V+ NT V+ F GQ + A F ++ G+ + T N ++D LCK V+ A++
Sbjct: 304 VVSYNT---VINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKA 360
Query: 225 VFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYC 283
VF + L + P+ T+N IHG+ + E ++EM H P Y+ ++ C
Sbjct: 361 VFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLC 420
Query: 284 RQYN-------FSKVYE--------------LLDEMQAQGCPPNVVTYTTVMSYLAKSGD 322
+ F V + D+M+ QG PNVV Y ++ L K G
Sbjct: 421 KNGRCTEARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGR 480
Query: 323 FEEAI-----------------------RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
++AI + +M G + D FN L+ L R RV
Sbjct: 481 VDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVM 540
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
EA + ++ M GV PD ++NT++ G ++A +L+ M + KPN T++
Sbjct: 541 EAQRLIEL-MLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSI-GLKPNEFTYNT 598
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
LL K + D+ S L + ++N + D+ TY ++HGL + + A L+ MI
Sbjct: 599 LLHGYCKARRIDDAYSLLREMLMNGP--TPDVVTYNTILHGLFQTGRFSEAKELYLNMIN 656
Query: 480 HDITPRYQTCRLILDEVKQKHMYDAAEKI 508
T +IL+ + + + D A K+
Sbjct: 657 SRTQWDMYTYNIILNGLCKNNCVDEAFKM 685
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 133/297 (44%), Gaps = 14/297 (4%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGT 196
Y ++D L K+ ++D I+ N + + +WE A E+
Sbjct: 468 YGALIDALCKLGRVDD-----------AILKFNQMINEVYGLCTVEKWEKAEELVFEMLD 516
Query: 197 FGLEKNTETMNLLLDTLCKEGKV-ELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDE 255
G+ + N L+ LC+EG+V E R + L L+ + P+ ++N + G C R DE
Sbjct: 517 QGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDE 576
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
A + M G P +Y+T++ YC+ Y LL EM G P+VVTY T++
Sbjct: 577 AAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILH 636
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
L ++G F EA + M ++ D +N ++ L + + V EA ++Q + G+
Sbjct: 637 GLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQ-SLCSKGLQ 695
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
TFN MI G E A + ++ P+V+T+ + ++ K G +E
Sbjct: 696 LHIITFNIMIGALLKGGKKEDAMDLFATISAY-GLVPDVETYCLIAENLIKEGSLEE 751
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 92/186 (49%), Gaps = 4/186 (2%)
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
P+ TY+ ++ + G E + + G + + FN L+ L A R+ EA +
Sbjct: 193 PDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNI 252
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM--NKLEHCKPNVQTFHPLLK 422
MPE G P+ ++NT++ F + E+A +L M ++ C P+V +++ ++
Sbjct: 253 LLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVIN 312
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
F+ G+ D+ + L M+++ + D+ TY VI GLC+A + A +F++M+ +
Sbjct: 313 GFFREGQVDKAYNLFL-QMIDR-GIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGV 370
Query: 483 TPRYQT 488
P T
Sbjct: 371 KPSNGT 376
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 124/278 (44%), Gaps = 10/278 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y +VD + D+ LL+ M K + T NT+ + + A + +DA
Sbjct: 561 YNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTL---LHGYCKARRIDDAYSLLR 617
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKIN 251
E+ G + T N +L L + G+ A+ ++L + S + +T+NI ++G CK N
Sbjct: 618 EMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNN 677
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
VDEA Q + G +I+++ +I + + +L + A G P+V TY
Sbjct: 678 CVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETYC 737
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
+ L K G EE + M+ G+ P+SR N L+ + A Y ++ E
Sbjct: 738 LIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRFLHRGDISRA-GAYLSKLDE 796
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH 409
+ + ST + +I+++S G +++ L E + H
Sbjct: 797 KNFSLEASTASMLISLYS-RGEYQQLAKSLPEKYRFPH 833
>gi|242061532|ref|XP_002452055.1| hypothetical protein SORBIDRAFT_04g017800 [Sorghum bicolor]
gi|241931886|gb|EES05031.1| hypothetical protein SORBIDRAFT_04g017800 [Sorghum bicolor]
Length = 810
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 173/371 (46%), Gaps = 15/371 (4%)
Query: 145 GKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTE 204
G++ +++ E VT NT+ R G+ DA R L G +
Sbjct: 116 GRLDDAERVLGASERAGTADAVTRNTLVAGYCR--AGGRLADAERMLASLALSG-SADVV 172
Query: 205 TMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
T N L+ C+EG++ AR + ++ PN++T + + G C D+A+ + EM
Sbjct: 173 TYNTLVAGYCREGRLNDARRLVADMP--FAPNSYTNSTLLKGLCSNKEWDDAEELLSEMI 230
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
GC P +++ II S C+ + +LD+M C V+ Y ++S LA+ G E
Sbjct: 231 RSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQMSKCRCTRGVIVYNEIISCLAELGRVE 290
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTM 384
EA+ + ++M KPD +N ++ L R R ++A + M PD TFNT+
Sbjct: 291 EALHLFDQMP---CKPDIFSYNTVMKGLCRDGRWEDAGTLI-AGMVRKDCPPDEVTFNTV 346
Query: 385 ITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK 444
I+ H G + A V+E+M K CKP+ T+ L+ + + G D+ L +LL + K
Sbjct: 347 ISYLCHRGLVDCAMEVVEQMPKY-GCKPDNFTYSALVNALSERGCVDDAL-ELLRTIPWK 404
Query: 445 HHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDA 504
+ Y V+ GLCRA++ + L EMI + + T LI+D + QK + D
Sbjct: 405 PN----TVCYRSVLKGLCRADRWDDVGKLVAEMIRNQLNLDEVTFGLIIDCLCQKGLVDY 460
Query: 505 AEKIEAVMKKL 515
++ M K
Sbjct: 461 GAEVLREMTKF 471
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 111/482 (23%), Positives = 192/482 (39%), Gaps = 72/482 (14%)
Query: 95 AIQPSHYLVNKLIHRFK-DDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQM 153
A P L+ KL + DD + LG AG+ ++ + G++ ++M
Sbjct: 101 AAVPCTLLIKKLCAAGRLDDAERVLGASERAGTADAVTRNT-LVAGYCRAGGRLADAERM 159
Query: 154 RALLEEMSKGHIVTLNTI-----------------------------AKVMRRFSGAGQW 184
A L +VT NT+ + +++ +W
Sbjct: 160 LASLALSGSADVVTYNTLVAGYCREGRLNDARRLVADMPFAPNSYTNSTLLKGLCSNKEW 219
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIF 243
+DA E+ G N T +++ +LC+ G + A V ++ C +N
Sbjct: 220 DDAEELLSEMIRSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQMSKCRCTRGVIVYNEI 279
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
I ++ RV+EA +M C P + SY+T+++ CR + L+ M + C
Sbjct: 280 ISCLAELGRVEEALHLFDQMP---CKPDIFSYNTVMKGLCRDGRWEDAGTLIAGMVRKDC 336
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
PP+ VT+ TV+SYL G + A+ + E+M G KPD+ ++ L+ L V +A+
Sbjct: 337 PPDEVTFNTVISYLCHRGLVDCAMEVVEQMPKYGCKPDNFTYSALVNALSERGCVDDALE 396
Query: 364 VYQ-------------------------------VEMPENGVAPDTSTFNTMITMFSHHG 392
+ + EM N + D TF +I G
Sbjct: 397 LLRTIPWKPNTVCYRSVLKGLCRADRWDDVGKLVAEMIRNQLNLDEVTFGLIIDCLCQKG 456
Query: 393 HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
+ VL EM K C P++ ++ L+ + G D+ L +L +M K + +
Sbjct: 457 LVDYGAEVLREMTKF-GCSPDIIIYNSLINGFSENGSVDDAL-ELFKNMSCKRN----VV 510
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
TY ++ GLCRA + E A L EM+ + P T ++ + QK + A ++ M
Sbjct: 511 TYNYMLKGLCRAEQWEDAGKLVAEMVKDECLPNEVTFSTLISYLCQKGFVECAIEVFEKM 570
Query: 513 KK 514
K
Sbjct: 571 PK 572
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/414 (26%), Positives = 184/414 (44%), Gaps = 47/414 (11%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDA 187
G + + Y +V+ L + +D LL + K + V ++ K + R A +W+D
Sbjct: 370 GCKPDNFTYSALVNALSERGCVDDALELLRTIPWKPNTVCYRSVLKGLCR---ADRWDDV 426
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHG 246
+ E+ L + T L++D LC++G V+ V E+ K P+ +N I+G
Sbjct: 427 GKLVAEMIRNQLNLDEVTFGLIIDCLCQKGLVDYGAEVLREMTKFGCSPDIIIYNSLING 486
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
+ + VD+A ++ K C V++Y+ +++ CR + +L+ EM C PN
Sbjct: 487 FSENGSVDDA---LELFKNMSCKRNVVTYNYMLKGLCRAEQWEDAGKLVAEMVKDECLPN 543
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMK--------IVGS-------------------- 338
VT++T++SYL + G E AI + EKM I+ S
Sbjct: 544 EVTFSTLISYLCQKGFVECAIEVFEKMPKYNCMPNVIIYSTLINGLSDQECVDDALKLLN 603
Query: 339 ----KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHH 394
KPD+ ++ + L RA R ++A + +EM PD TF+ +I H G
Sbjct: 604 DMPCKPDTICYSAALKGLCRAERWEDAGELI-LEMIRKNCLPDEVTFSILINNLCHKGFL 662
Query: 395 EKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTY 454
E A V E M K E C PNV + L+ + + ++ L QLL +M + D Y
Sbjct: 663 ESATEVSELMLKYE-CMPNVFIYSSLINGFAEQYRAEDAL-QLLRNMPCEP----DTICY 716
Query: 455 TLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+ + GLCRA + E A L EM T +++ + Q + D A ++
Sbjct: 717 SAALKGLCRAKRWEDARELIAEMFRKQCPLDEATFSMLIGSLCQNGLVDMATEV 770
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 107/229 (46%), Gaps = 8/229 (3%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
IY +++ L +D LL +M K + + K + R A +WEDA E+
Sbjct: 581 IYSTLINGLSDQECVDDALKLLNDMPCKPDTICYSAALKGLCR---AERWEDAGELILEM 637
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRV 253
+ T ++L++ LC +G +E A V L LK PN ++ I+G+ + R
Sbjct: 638 IRKNCLPDEVTFSILINNLCHKGFLESATEVSELMLKYECMPNVFIYSSLINGFAEQYRA 697
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
++A +Q ++ C P I YS ++ CR + EL+ EM + CP + T++ +
Sbjct: 698 EDA---LQLLRNMPCEPDTICYSAALKGLCRAKRWEDARELIAEMFRKQCPLDEATFSML 754
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
+ L ++G + A + E+M + G P+ + + L+ RV E +
Sbjct: 755 IGSLCQNGLVDMATEVFEQMSVYGCSPNRKIHSSLVNGYSEQRRVDEGL 803
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 104/222 (46%), Gaps = 10/222 (4%)
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNI 242
+DA++ +++ + +T + L LC+ + E A + LE+ K+C+P + TF+I
Sbjct: 596 DDALKLLNDMPC---KPDTICYSAALKGLCRAERWEDAGELILEMIRKNCLP-DEVTFSI 651
Query: 243 FIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
I+ C ++ A + M + C P V YS++I + QY +LL M
Sbjct: 652 LINNLCHKGFLESATEVSELMLKYECMPNVFIYSSLINGFAEQYRAEDALQLLRNMP--- 708
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
C P+ + Y+ + L ++ +E+A + +M D F+ LI +L + V A
Sbjct: 709 CEPDTICYSAALKGLCRAKRWEDARELIAEMFRKQCPLDEATFSMLIGSLCQNGLVDMAT 768
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
V++ +M G +P+ ++++ +S ++ +L M
Sbjct: 769 EVFE-QMSVYGCSPNRKIHSSLVNGYSEQRRVDEGLKLLSSM 809
>gi|255555231|ref|XP_002518652.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542033|gb|EEF43577.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 827
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 110/437 (25%), Positives = 198/437 (45%), Gaps = 58/437 (13%)
Query: 117 ALGIFRWAGSCPGYEH--SSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAK 173
A+ +F W +E + + +++ +LGK ++ ++L + K G + +
Sbjct: 163 AMSVFSWVREREDFESVLNCSVVAVIITMLGKEGKVSAASSILNNLRKDGFDLDVYAYTS 222
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLD---------------------- 211
++ ++ G++ DAV F ++ G + T N++L+
Sbjct: 223 LITAYASNGRYRDAVLVFKKMEEEGCKPTLITYNVILNVYGKMGMPWSKISGLVHGMKSS 282
Query: 212 -------------TLCKEGKV-ELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEA 256
+ C+ G + E A VF E+K S P+ TFN + + K R EA
Sbjct: 283 GVAPDDYTYNTLISCCRRGSLYEEAAQVFEEMKLSGFSPDKVTFNTLLDVYGKSRRPKEA 342
Query: 257 QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSY 316
++EM+ G P +++Y+++I +Y R + EL D+M +G P+V TYTT++S
Sbjct: 343 MEVLKEMEFSGFSPSIVTYNSLISAYARDGLLREAMELKDQMVEKGIKPDVFTYTTLLSG 402
Query: 317 LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
K+G E A+RI +M+ G KP+ FN LI G R E + V++ E+ AP
Sbjct: 403 FEKAGMDEPAMRIFGEMRAAGCKPNICTFNALIKMHGNRGRFAEMMKVFE-EIEICNCAP 461
Query: 377 DTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS- 435
D T+NT++ +F +G + V +EM + P TF+ L+ + + G + ++
Sbjct: 462 DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFV-PERDTFNTLISAYSRCGSFQQAMAV 520
Query: 436 --QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT-CRLI 492
++L+ V D+++Y V+ L R E + +F EM P T C L+
Sbjct: 521 YKRMLEAGVTP-----DLSSYNAVLAALARGGLWEQSEKVFAEMKDGRCKPNELTYCSLL 575
Query: 493 LDEVKQKHMYDAAEKIE 509
H Y +++IE
Sbjct: 576 -------HAYANSKEIE 585
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 150/342 (43%), Gaps = 18/342 (5%)
Query: 147 VRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETM 206
+R +MRA K +I T N + K+ G++ + ++ F+E+ + T
Sbjct: 413 MRIFGEMRA---AGCKPNICTFNALIKM---HGNRGRFAEMMKVFEEIEICNCAPDIVTW 466
Query: 207 NLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKG 265
N LL + G VF E+K + P TFN I + + +A + M
Sbjct: 467 NTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLE 526
Query: 266 HGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEE 325
G P + SY+ ++ + R + + ++ EM+ C PN +TY +++ A S + E
Sbjct: 527 AGVTPDLSSYNAVLAALARGGLWEQSEKVFAEMKDGRCKPNELTYCSLLHAYANSKEIER 586
Query: 326 AIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMI 385
+ E++ ++P L+ + + E + ++ E+ + G +PD ST N MI
Sbjct: 587 MHTLAEEIYSGLTEPVPVLLKTLVLVNSKCDLLMETEHAFE-ELKKKG-SPDLSTLNAMI 644
Query: 386 TMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKT---GKTDECLSQLLDDMV 442
++ KA +L MN+ P++ T++ L+ ++ +++E L ++L
Sbjct: 645 AIYGRRQMVAKANEILNFMNE-SGFSPSLATYNSLMYMHSRSENFERSEEVLKEIL---- 699
Query: 443 NKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
L D+ +Y VI CR + + A +F M + + P
Sbjct: 700 -AKGLKPDLISYNTVIFAYCRNGRMKDASRIFSYMKTYGLVP 740
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/365 (20%), Positives = 152/365 (41%), Gaps = 41/365 (11%)
Query: 82 EVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSA--LGIFRWAGSCPGYEHSSEIYEM 139
E+ + ++ +CN P N L+ F + + G+F+ G+ + +
Sbjct: 446 EMMKVFEEIEICNC-APDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRA-GFVPERDTFNT 503
Query: 140 MVDILGKVRQMDQMRALLEEMSKGHIVT-LNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
++ + Q A+ + M + + L++ V+ + G WE + + F E+
Sbjct: 504 LISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAALARGGLWEQSEKVFAEMKDGR 563
Query: 199 LEKN-------------------------------TETMNLLLDTLC-KEGKVEL---AR 223
+ N TE + +LL TL K +L
Sbjct: 564 CKPNELTYCSLLHAYANSKEIERMHTLAEEIYSGLTEPVPVLLKTLVLVNSKCDLLMETE 623
Query: 224 SVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYC 283
F ELK P+ T N I + + V +A + M G P + +Y++++ +
Sbjct: 624 HAFEELKKKGSPDLSTLNAMIAIYGRRQMVAKANEILNFMNESGFSPSLATYNSLMYMHS 683
Query: 284 RQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSR 343
R NF + E+L E+ A+G P++++Y TV+ ++G ++A RI MK G PD
Sbjct: 684 RSENFERSEEVLKEILAKGLKPDLISYNTVIFAYCRNGRMKDASRIFSYMKTYGLVPDVI 743
Query: 344 FFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEE 403
+N + + S ++A+ V + M ++G + +T+N+++ + H A +
Sbjct: 744 TYNTFVASYAADSLFEDAIGVVRY-MIKHGCKRNQNTYNSIVDGYCKHSRRADAIMFVSS 802
Query: 404 MNKLE 408
+N+L+
Sbjct: 803 LNQLD 807
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 109/238 (45%), Gaps = 3/238 (1%)
Query: 276 STIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKI 335
+ II ++ S +L+ ++ G +V YT++++ A +G + +A+ + +KM+
Sbjct: 186 AVIITMLGKEGKVSAASSILNNLRKDGFDLDVYAYTSLITAYASNGRYRDAVLVFKKMEE 245
Query: 336 VGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHE 395
G KP +N ++ G+ + M +GVAPD T+NT+I+ +E
Sbjct: 246 EGCKPTLITYNVILNVYGKMGMPWSKISGLVHGMKSSGVAPDDYTYNTLISCCRRGSLYE 305
Query: 396 KAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYT 455
+A V EEM KL P+ TF+ LL K+ + E + ++L +M S I TY
Sbjct: 306 EAAQVFEEM-KLSGFSPDKVTFNTLLDVYGKSRRPKEAM-EVLKEM-EFSGFSPSIVTYN 362
Query: 456 LVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
+I R A L +M+ I P T +L ++ M + A +I M+
Sbjct: 363 SLISAYARDGLLREAMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMR 420
>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
Length = 636
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 154/304 (50%), Gaps = 5/304 (1%)
Query: 175 MRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-I 233
+ R S AG+ + + F ++ G+ T N+++ +CKEG + ARS+F ++K +
Sbjct: 104 LHRLSKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGL 163
Query: 234 PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
P+ T+N I G+ KI +DE+ +EMK GC P VI+Y+ +I S+C+ + +E
Sbjct: 164 TPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFE 223
Query: 294 LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLG 353
EM+ + PNV++Y+T++ L K G + AI+ M VG P+ ++ LI
Sbjct: 224 FFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANC 283
Query: 354 RASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPN 413
+A + EA ++ EM + V + T+ T++ G +A + M K PN
Sbjct: 284 KAGNLGEA-FMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGK-AGVTPN 341
Query: 414 VQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLL 473
+Q + L+ K D+ + +L ++M K + DI + ++ GLC +K E ++
Sbjct: 342 LQAYTALIHGHIKVRSMDKAM-ELFNEMREK-DIKPDILLWGTIVWGLCSESKLEECKII 399
Query: 474 FKEM 477
EM
Sbjct: 400 MTEM 403
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 176/380 (46%), Gaps = 17/380 (4%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++D L K M +M++ G + T + ++ AG +A DE+
Sbjct: 240 YSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEML 299
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
++ N T LLD LC+EG + A +F + K+ + PN + IHG K+ +D
Sbjct: 300 QEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMD 359
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
+A EM+ P ++ + TI+ C + + ++ EM+ G N V YTT+M
Sbjct: 360 KAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLM 419
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
K+G+ EAI + E+M+ +G++ F LI L + VQEA+Y Y MP++ +
Sbjct: 420 DAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIY-YFGRMPDHDL 478
Query: 375 APDTSTFNTMITMFSHH---GHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
P+ + + +I + G +K F +++ N + P+ + ++ K G
Sbjct: 479 QPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMI----PDKIAYTAMIDGNLKHGNFQ 534
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRL 491
E L+ + + + + + LD+ YT ++ GL + + + A EMIG I P C
Sbjct: 535 EALN--MRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTR 592
Query: 492 ILDEVKQKHMYDAAEKIEAV 511
+L +KH Y+ EA+
Sbjct: 593 LL----RKH-YELGNIDEAI 607
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 158/388 (40%), Gaps = 58/388 (14%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDA 187
G+ H++E Y ++V IL R +L+E+ ++ + + +++ W
Sbjct: 4 GFRHTTESYCILVHILFYARMYFHANNILKELVLSSWVLPGSDVFEIL--------WTTR 55
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHG 246
G F + L L + G +E A FL + K + P A + N F+H
Sbjct: 56 NVCVPGFGVF---------DALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHR 106
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
K D ++ ++M G G P
Sbjct: 107 LSKAGEGDLSRDFFRDMVG-----------------------------------AGIAPT 131
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
V TY ++ ++ K GD A + E+MK +G PD +N LI G+ + E+V +++
Sbjct: 132 VFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFE 191
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
EM G PD T+N +I F +AF EM K + KPNV ++ L+ + K
Sbjct: 192 -EMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREM-KDKDLKPNVISYSTLIDALCK 249
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
G + +D + + L + TY+ +I C+A A++L EM+ +
Sbjct: 250 EGMMQMAIKFFVD--MTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNI 307
Query: 487 QTCRLILDEVKQKHMYDAAEKIEAVMKK 514
T +LD + ++ M + AE++ M K
Sbjct: 308 VTYTTLLDGLCEEGMMNEAEELFRAMGK 335
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 99/229 (43%), Gaps = 9/229 (3%)
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
S V+E+L + C P + + S L + G E A + +M P +R N
Sbjct: 45 SDVFEILWTTR-NVCVPGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAF 103
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
++ L +A + ++ +M G+AP T+N MI G A + E+M K+
Sbjct: 104 LHRLSKAGEGDLSRDFFR-DMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKM- 161
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDE--CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANK 466
P++ T++ L+ K G DE CL + + M D+ TY +I+ C+
Sbjct: 162 GLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFM----GCEPDVITYNALINSFCKFKG 217
Query: 467 CEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
A+ F+EM D+ P + ++D + ++ M A K M ++
Sbjct: 218 MLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRV 266
>gi|52076779|dbj|BAD45723.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
Length = 629
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 191/409 (46%), Gaps = 24/409 (5%)
Query: 120 IFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK------GHIVTLNTIAK 173
I+ C Y ++V+ L K ++ +L+ MS+ +VTLNT+
Sbjct: 158 IYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVD 217
Query: 174 VMRRFSGAGQWEDAVRTFDEL--GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS 231
+ + +G+ ++A+ ++ G NT T N L+D C+ G + +A + ++++
Sbjct: 218 GLCK---SGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMEN 274
Query: 232 -CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK-----GHGCHPCVISYSTIIQSYCRQ 285
+P N T N + G C+ R A +E + G G ++YST++ +
Sbjct: 275 EGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGN---AVTYSTLVGALLHT 331
Query: 286 YNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFF 345
N EL E ++G P+ + Y T++S L ++G E+A + MK G K D++ +
Sbjct: 332 NNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAY 391
Query: 346 NCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMN 405
N LI R R+ EA + Q EM E G+ PD T+NT+++ G +L +M
Sbjct: 392 NILIAGFCRKKRLHEAYELLQ-EMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMI 450
Query: 406 KLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRAN 465
+ C+P+V TF L+ K GK DE L ++L M ++ + + Y +I LC+
Sbjct: 451 D-DGCQPSVITFGTLVHGYCKVGKIDEAL-RILRSM-DESGIHPNNVIYNTLIDFLCKRG 507
Query: 466 KCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
+ A LF EM + T +L ++ K+M + A ++ M++
Sbjct: 508 DVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMRE 556
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 165/382 (43%), Gaps = 68/382 (17%)
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC---IPPNAHTFNIFIHGWCKIN 251
G + + T +L++ LCK G+V A V + I P+ T N + G CK
Sbjct: 164 GCASVRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSG 223
Query: 252 RVDEA-QWTIQEMKG-HGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
RV EA + Q M HGC P ++Y+ +I ++CR N S YEL+++M+ +G P N+VT
Sbjct: 224 RVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVT 283
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIV--------------------------------- 336
T++ L ++G A+ + + V
Sbjct: 284 LNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHE 343
Query: 337 ----GSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
G PD+ + +I L +A R+++A + M E G DT +N +I F
Sbjct: 344 KMSEGHSPDAIMYFTMISGLTQAGRLEDACSMAS-SMKEAGFKLDTKAYNILIAGFCRKK 402
Query: 393 HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG---KTDECLSQLLDDMVNKHHLSL 449
+A+ +L+EM ++ +P+V T++ LL K G DE L +++DD
Sbjct: 403 RLHEAYELLQEMKEV-GIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQP----- 456
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR---YQT-----CRL--------IL 493
+ T+ ++HG C+ K + A + + M I P Y T C+ +
Sbjct: 457 SVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELF 516
Query: 494 DEVKQKHMYDAAEKIEAVMKKL 515
DE+K+K + A++K L
Sbjct: 517 DEMKEKSVPANVTTFNALLKGL 538
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 138/272 (50%), Gaps = 6/272 (2%)
Query: 161 SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVE 220
KG+ VT +T+ + + G A+ F E + G + ++ L + G++E
Sbjct: 314 GKGNAVTYSTLVGALLHTNNVGM---AMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLE 370
Query: 221 LARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
A S+ +K + + +NI I G+C+ R+ EA +QEMK G P V +Y+T++
Sbjct: 371 DACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLL 430
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
C+ +F+ V ELL +M GC P+V+T+ T++ K G +EA+RI M G
Sbjct: 431 SGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIH 490
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
P++ +N LI L + V A+ ++ EM E V + +TFN ++ EKAF
Sbjct: 491 PNNVIYNTLIDFLCKRGDVDLAIELFD-EMKEKSVPANVTTFNALLKGLRDKNMPEKAFE 549
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
++++M + E C P+ T L++ G+TD
Sbjct: 550 LMDQMRE-ERCFPDYVTVDVLMEWLPVIGETD 580
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 98/253 (38%), Gaps = 71/253 (28%)
Query: 158 EEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEG 217
E+MS+GH ++ + AG+ EDA + G + +T+ N+L+ C++
Sbjct: 343 EKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKK 402
Query: 218 KVELARSVFLELK-----------------SCIP-------------------PNAHTFN 241
++ A + E+K SC P+ TF
Sbjct: 403 RLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFG 462
Query: 242 IFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFS------------ 289
+HG+CK+ ++DEA ++ M G HP + Y+T+I C++ +
Sbjct: 463 TLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEK 522
Query: 290 -----------------------KVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
K +EL+D+M+ + C P+ VT +M +L G+ +
Sbjct: 523 SVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWLPVIGETDRL 582
Query: 327 IRITEKMKIVGSK 339
R ++ + SK
Sbjct: 583 KRFMQQGEHTASK 595
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 74/177 (41%), Gaps = 3/177 (1%)
Query: 304 PPNVVTYTTVMS-YLAKSGDFEEAIRITEKMKIVGSKPDSRF-FNCLIYTLGRASRVQEA 361
PP+ + ++S LA+ E A R G+ F FN ++ L R V
Sbjct: 96 PPSAPLLSAILSKLLARFSSPEPAARFLAASLAAGAPAPDVFAFNSILAALARVRDVPGM 155
Query: 362 VYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE-HCKPNVQTFHPL 420
+Y + V PD T+ ++ G A VL+ M++ + +P+V T + +
Sbjct: 156 ARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTV 215
Query: 421 LKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
+ K+G+ E L+ + M + H + TY +I CR AY L ++M
Sbjct: 216 VDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKM 272
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 174/346 (50%), Gaps = 5/346 (1%)
Query: 170 TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL 229
T V+ R +G A+ F ++ ++ + ++++D+LCK+G + A S+F E+
Sbjct: 212 TYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM 271
Query: 230 K-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
+ I + T++ I G C + D+ ++EM G P V+++S +I + ++
Sbjct: 272 EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKL 331
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
+ EL +EM +G P+ +TY +++ K EA ++ + M G +PD ++ L
Sbjct: 332 LEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSIL 391
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
I + +A RV + + +++ E+ G+ P+T T+NT++ F G A + +EM
Sbjct: 392 INSYCKAKRVDDGMRLFR-EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVS-R 449
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
P+V T+ LL G+ ++ L ++ + M K ++L I Y ++IHG+C A+K +
Sbjct: 450 GVPPSVVTYGILLDGLCDNGELNKAL-EIFEKM-QKSRMTLGIGIYNIIIHGMCNASKVD 507
Query: 469 WAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
A+ LF + + P T +++ + +K A+ + MK+
Sbjct: 508 DAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 553
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 142/274 (51%), Gaps = 3/274 (1%)
Query: 151 DQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLL 210
D + L E + + I + T + ++ F G+ +A ++E+ T G+ +T T N L+
Sbjct: 298 DGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLI 357
Query: 211 DTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCH 269
D CKE + A +F L + P+ T++I I+ +CK RVD+ +E+ G
Sbjct: 358 DGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLI 417
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI 329
P I+Y+T++ +C+ + EL EM ++G PP+VVTY ++ L +G+ +A+ I
Sbjct: 418 PNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEI 477
Query: 330 TEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFS 389
EKM+ +N +I+ + AS+V +A ++ + + GV PD T+N MI
Sbjct: 478 FEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLF-CSLSDKGVKPDVVTYNVMIGGLC 536
Query: 390 HHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
G +A + +M K + C P+ T++ L+++
Sbjct: 537 KKGSLSEADMLFRKM-KEDGCTPDDFTYNILIRA 569
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 167/346 (48%), Gaps = 5/346 (1%)
Query: 170 TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL 229
T + ++ F G+ +AV D + + T++ L++ LC +G+V A + +
Sbjct: 142 TFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRM 201
Query: 230 -KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
+ P+ T+ ++ CK A ++M+ V+ YS +I S C+ +F
Sbjct: 202 VEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSF 261
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
L +EM+ +G +VVTY++++ L G +++ ++ +M PD F+ L
Sbjct: 262 DDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSAL 321
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
I + ++ EA +Y EM G+APDT T+N++I F +A + + M +
Sbjct: 322 IDVFVKEGKLLEAKELYN-EMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVS-K 379
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
C+P++ T+ L+ S K + D+ + +L ++ +K + IT TLV+ G C++ K
Sbjct: 380 GCEPDIVTYSILINSYCKAKRVDDGM-RLFREISSKGLIPNTITYNTLVL-GFCQSGKLN 437
Query: 469 WAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
A LF+EM+ + P T ++LD + + A +I M+K
Sbjct: 438 AAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQK 483
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 152/327 (46%), Gaps = 11/327 (3%)
Query: 35 IVSSSPIESYCSDGARLDHHQVL--CVDSPRLPDIDVIISKVHVGSSEDEVFQS--LKQD 90
+ SS I C+DG D ++L + +PD+ + + V E ++ ++ L +
Sbjct: 281 VTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNE 340
Query: 91 HVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVR 148
+ I P N LI F ++ A +F S G E Y ++++ K +
Sbjct: 341 MITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVS-KGCEPDIVTYSILINSYCKAK 399
Query: 149 QMDQ-MRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN 207
++D MR E SKG I T ++ F +G+ A F E+ + G+ + T
Sbjct: 400 RVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYG 459
Query: 208 LLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
+LLD LC G++ A +F ++ KS + +NI IHG C ++VD+A +
Sbjct: 460 ILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDK 519
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM-SYLAKSGDFEE 325
G P V++Y+ +I C++ + S+ L +M+ GC P+ TY ++ ++L SG
Sbjct: 520 GVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSG-LIS 578
Query: 326 AIRITEKMKIVGSKPDSRFFNCLIYTL 352
++ + E+MK+ G DS +I L
Sbjct: 579 SVELIEEMKVCGFSADSSTIKMVIDML 605
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 124/273 (45%), Gaps = 5/273 (1%)
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYEL 294
P FN + + D + M+ +G + + + +I YCR+ + +
Sbjct: 68 PTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSV 127
Query: 295 LDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGR 354
L G P+ +T++T+++ G EA+ + ++M + +PD + LI L
Sbjct: 128 LGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCL 187
Query: 355 ASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNV 414
RV EA+ + M E G PD T+ ++ G+ A + +M + + K +V
Sbjct: 188 KGRVSEALVLID-RMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEE-RNIKASV 245
Query: 415 QTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLF 474
+ ++ S K G D+ LS L ++M K + D+ TY+ +I GLC K + +
Sbjct: 246 VQYSIVIDSLCKDGSFDDALS-LFNEMEMK-GIKADVVTYSSLIGGLCNDGKWDDGAKML 303
Query: 475 KEMIGHDITPRYQTCRLILDE-VKQKHMYDAAE 506
+EMIG +I P T ++D VK+ + +A E
Sbjct: 304 REMIGRNIIPDVVTFSALIDVFVKEGKLLEAKE 336
>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 713
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 148/300 (49%), Gaps = 11/300 (3%)
Query: 189 RTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK--SCIPPNAHTFNIFIHG 246
R F++L N T N+++D LCKEG++ ARS+F +K C+P + TFN I G
Sbjct: 178 RLFEQLPA----PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLP-DVVTFNSLIDG 232
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
+ K +DE + ++EM+ GC V++Y+ +I +C+ Y M+ +G N
Sbjct: 233 YGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMAN 292
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
VVT++T + K G EA+++ +M++ G + + CLI +A R+ +A+ +
Sbjct: 293 VVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLD 352
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
EM GV + T+ ++ +A VL M K + N + L+ F
Sbjct: 353 -EMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEK-AGVRANELLYTTLIHGHFM 410
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
+++ L LL +M NK L LDI+ Y +I GLC +K + A L +M + P Y
Sbjct: 411 NKNSEKALG-LLSEMKNK-GLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNY 468
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 178/374 (47%), Gaps = 13/374 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
+ ++D GK ++D++ L+EEM K +VT N + +F G+ E A F
Sbjct: 226 FNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKF---GRMETAYGYFA 282
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKIN 251
+ G+ N T + +D CKEG V A +F +++ + N T+ I G CK
Sbjct: 283 AMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAG 342
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
R+D+A + EM G V++Y+ ++ C++ ++ ++L M+ G N + YT
Sbjct: 343 RLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYT 402
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
T++ + + E+A+ + +MK G + D + LI L ++ EA + +M E
Sbjct: 403 TLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLL-TKMDE 461
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
+G+ P+ + TM+ G +A +L+++ +PNV T+ L+ K G D
Sbjct: 462 SGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILD-SGFQPNVITYCALIDGLCKAGSID 520
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRL 491
E +S + + L ++ YT ++ GLC+ A LF EM+ ++
Sbjct: 521 EAISHF--NKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTA 578
Query: 492 ILDE-VKQKHMYDA 504
+LD +KQ +++DA
Sbjct: 579 LLDGYLKQGNLHDA 592
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 138/305 (45%), Gaps = 5/305 (1%)
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHT 239
AG+ +DA+ DE+ G+ N T +L+D LCKE KV A V + K+ + N
Sbjct: 341 AGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELL 400
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+ IHG ++A + EMK G + Y +IQ C + + LL +M
Sbjct: 401 YTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMD 460
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
G PN + YTT+M KSG EAI + +K+ G +P+ + LI L +A +
Sbjct: 461 ESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSID 520
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
EA+ + +M + G+ P+ + ++ +G +A + EM V +
Sbjct: 521 EAISHFN-KMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKV-VYTA 578
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
LL K G + + L M++ L LD+ YT I G C N A +F EMIG
Sbjct: 579 LLDGYLKQGNLHDAFA-LKAKMIDSG-LQLDLFCYTCFISGFCNLNMMPEAREVFSEMIG 636
Query: 480 HDITP 484
H I P
Sbjct: 637 HGIAP 641
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 122/255 (47%), Gaps = 3/255 (1%)
Query: 155 ALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTL 213
LL EM +KG + ++ +++ + ++A ++ GLE N ++D
Sbjct: 419 GLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDAC 478
Query: 214 CKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCV 272
K GKV A ++ + L S PN T+ I G CK +DEA +M+ G P V
Sbjct: 479 FKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNV 538
Query: 273 ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEK 332
+Y+ ++ C+ ++ +L +EM +G + V YT ++ K G+ +A + K
Sbjct: 539 QAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAK 598
Query: 333 MKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
M G + D + C I + + EA V+ EM +G+APD + +N +I+ + G
Sbjct: 599 MIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFS-EMIGHGIAPDRAVYNCLISKYQKLG 657
Query: 393 HHEKAFHVLEEMNKL 407
+ E+A + +EM ++
Sbjct: 658 NLEEAISLQDEMERV 672
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 119/262 (45%), Gaps = 8/262 (3%)
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
+D+A + ++ P + + I+ R + V L +++ A PNV T+
Sbjct: 138 LDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPA----PNVFTFNI 193
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN 372
V+ +L K G+ EA + +MK +G PD FN LI G+ + E + + EM +
Sbjct: 194 VIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVE-EMRRS 252
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
G D T+N +I F G E A+ M + E NV TF + + K G E
Sbjct: 253 GCKADVVTYNALINCFCKFGRMETAYGYFAAMKR-EGVMANVVTFSTFVDAFCKEGLVRE 311
Query: 433 CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLI 492
+ L + ++L+ TYT +I G C+A + + A +L EM+ + T ++
Sbjct: 312 AMK--LFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVL 369
Query: 493 LDEVKQKHMYDAAEKIEAVMKK 514
+D + ++ AE + +M+K
Sbjct: 370 VDGLCKERKVAEAEDVLRMMEK 391
>gi|255548407|ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545740|gb|EEF47244.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 878
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 173/370 (46%), Gaps = 9/370 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLE-EMSKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G ++ M+ LG++ +++ +A+ + + +G+ T+ + ++ + +G +A
Sbjct: 185 GKNEQGKLASAMISTLGRLGKVELAKAVFDTALKEGYGKTVYAFSALISAYGRSGYCNEA 244
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFL---ELKSCIPPNAHTFNIFI 244
++ FD + + GL N T N ++D C +G VE + V + L + + P+ TFN +
Sbjct: 245 IKVFDSMKSNGLMPNLVTYNAVIDA-CGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLL 303
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
+ + A+ M G + +Y+T++ + C+ +E++ EM +
Sbjct: 304 AVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNIL 363
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
PNVVTY+T++ AK G ++A+ + +MK +G D +N L+ + R ++A+ V
Sbjct: 364 PNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDV 423
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
+ EM G+ D T+N ++ + +++ V EEM K PN+ T+ L+
Sbjct: 424 CK-EMENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEM-KRGRVSPNLLTYSTLIDVY 481
Query: 425 FKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
K G E + + + L D+ Y+ +I LC+ E + L EM I P
Sbjct: 482 SKGGLYKEAMEVFRE--FKQAGLKADVVLYSALIDALCKNGLVESSVTLLDEMTKEGIRP 539
Query: 485 RYQTCRLILD 494
T I+D
Sbjct: 540 NVVTYNSIID 549
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 104/440 (23%), Positives = 195/440 (44%), Gaps = 35/440 (7%)
Query: 33 SHIVSSSPIESYCSDGARLDHHQVLCVDSPRLPDIDVIISKVHVGSSEDEVFQSLKQDHV 92
S ++S+ YC++ ++ P L + +I G E + + +
Sbjct: 229 SALISAYGRSGYCNEAIKVFDSMKSNGLMPNLVTYNAVIDACGKGGVEFKKVVEIFDGML 288
Query: 93 CNAIQPSHYLVNKLIHRFKDD--WKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQM 150
N +QP N L+ W++A +F A G + Y ++D + K QM
Sbjct: 289 SNGVQPDRITFNSLLAVCSRGGLWEAARRLFS-AMVDKGIDQDIFTYNTLLDAVCKGGQM 347
Query: 151 DQMRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLL 209
D ++ EM +I+ + T + ++ ++ G+ +DA+ F+E+ G+ + + N L
Sbjct: 348 DLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNTL 407
Query: 210 LDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGC 268
L K G+ E A V E+++ I + T+N + G+ K R DE + +EMK
Sbjct: 408 LSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRV 467
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
P +++YST+I Y + + + E+ E + G +VV Y+ ++ L K+G E ++
Sbjct: 468 SPNLLTYSTLIDVYSKGGLYKEAMEVFREFKQAGLKADVVLYSALIDALCKNGLVESSVT 527
Query: 329 ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV------YVYQVEMPENGVAPDT---- 378
+ ++M G +P+ +N +I GR++ Q V QVE + V +
Sbjct: 528 LLDEMTKEGIRPNVVTYNSIIDAFGRSASAQCVVDDSGETTALQVESLSSIVVQEAIESQ 587
Query: 379 ---STFNTMITMFSHHGHHEKA--------------FHVLEEMNKLEHCKPNVQTFHPLL 421
N +I +F EKA V ++M++L+ KPNV TF +L
Sbjct: 588 AADKEDNRIIEIFGKLA-AEKACEAKNSGKQEILCILGVFQKMHELK-IKPNVVTFSAIL 645
Query: 422 KSCFKTGKTDECLSQLLDDM 441
+C + ++ S LL+++
Sbjct: 646 NACSRCDSFEDA-SMLLEEL 664
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 161/343 (46%), Gaps = 16/343 (4%)
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNT------ETMNLLLDTLCKEGKVELARSVF- 226
++R G AVR F+ F + + + + + ++ TL + GKVELA++VF
Sbjct: 159 LLRELGNRGDSAKAVRCFE----FAVRRESGKNEQGKLASAMISTLGRLGKVELAKAVFD 214
Query: 227 LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQ- 285
LK + F+ I + + +EA MK +G P +++Y+ +I + +
Sbjct: 215 TALKEGYGKTVYAFSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLVTYNAVIDACGKGG 274
Query: 286 YNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFF 345
F KV E+ D M + G P+ +T+ ++++ ++ G +E A R+ M G D +
Sbjct: 275 VEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTY 334
Query: 346 NCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMN 405
N L+ + + ++ A + EMP + P+ T++TMI ++ G + A ++ EM
Sbjct: 335 NTLLDAVCKGGQMDLAFEIMS-EMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMK 393
Query: 406 KLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRAN 465
L V +++ LL K G+ ++ L + +M N + D+ TY ++ G +
Sbjct: 394 FLGVGLDRV-SYNTLLSVYAKLGRFEQAL-DVCKEMENAG-IRKDVVTYNALLAGYGKQY 450
Query: 466 KCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+ + +F+EM ++P T ++D + +Y A ++
Sbjct: 451 RYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEV 493
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 90/206 (43%), Gaps = 5/206 (2%)
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
+ ++S L + G E A + + G F+ LI GR+ EA+ V+ M
Sbjct: 194 SAMISTLGRLGKVELAKAVFDTALKEGYGKTVYAFSALISAYGRSGYCNEAIKVFD-SMK 252
Query: 371 ENGVAPDTSTFNTMITMFSHHG-HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
NG+ P+ T+N +I G +K + + M +P+ TF+ LL C + G
Sbjct: 253 SNGLMPNLVTYNAVIDACGKGGVEFKKVVEIFDGMLS-NGVQPDRITFNSLLAVCSRGGL 311
Query: 430 TDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTC 489
E +L MV+K + DI TY ++ +C+ + + A+ + EM +I P T
Sbjct: 312 W-EAARRLFSAMVDKG-IDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTY 369
Query: 490 RLILDEVKQKHMYDAAEKIEAVMKKL 515
++D + D A + MK L
Sbjct: 370 STMIDGYAKVGRLDDALNMFNEMKFL 395
>gi|414872431|tpg|DAA50988.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 1627
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 117/495 (23%), Positives = 214/495 (43%), Gaps = 90/495 (18%)
Query: 100 HYLVNKLIHRFKDDWKSALGI------FRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQM 153
H+LV +++ K+ +G+ FRWA YEH + Y ++ L V Q +M
Sbjct: 1080 HWLVREVM-------KTDVGVNVKMQFFRWAAKRRNYEHDTSTYMALIHCLEVVEQYGEM 1132
Query: 154 RALLEEMSKGHI--VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLD 211
+++EM + I VT ++ V+R A A+ F ++ T + + N ++
Sbjct: 1133 WKMIQEMVRNPICVVTPTELSDVVRMLGNAKMVRQAITIFYQIKTRKCQPIAQAYNSMII 1192
Query: 212 TLCKEGKVELARSVFLELKS---CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGC 268
L EG+ E ++ E+ + C P+ T++ I +CK+ R D A + EMK G
Sbjct: 1193 MLMHEGQYEKVHQLYNEMSTEGHCF-PDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGM 1251
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
P Y+ +I + + + L +EM+ Q C P+V TYT ++ L K+G +EA
Sbjct: 1252 QPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYH 1311
Query: 329 ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ---------------------- 366
+M+ G +PD+ F N +I LG+A R+ +A+ ++Q
Sbjct: 1312 FFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALF 1371
Query: 367 ------VEMP-------ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNK------- 406
E+P E+G++P + T++ +I F EKA +LEEM++
Sbjct: 1372 ESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCP 1431
Query: 407 --------------------------LEHC-KPNVQTFHPLLKSCFKTGKTDECLSQLLD 439
E+C + + + ++K K G+ D+ ++ + D
Sbjct: 1432 AAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAIN-MFD 1490
Query: 440 DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQK 499
+M NK + D+ Y ++ GL R + A + M H P + +IL+ + +
Sbjct: 1491 EM-NKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKT 1549
Query: 500 HMYDAAEKIEAVMKK 514
A ++ + MK+
Sbjct: 1550 GGPHRAMEMLSNMKQ 1564
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 177/375 (47%), Gaps = 42/375 (11%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVT-LNTIAKVMRRFSGAGQWEDA 187
G + +++IY M++ + K +L EEM + + T +++R AG+ ++A
Sbjct: 1250 GMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEA 1309
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS--CIP----------- 234
F E+ G +T MN +++ L K G+++ A +F E+++ CIP
Sbjct: 1310 YHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKA 1369
Query: 235 ------------------------PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHP 270
P++ T++I I G+CK NR+++A ++EM G P
Sbjct: 1370 LFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPP 1429
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRIT 330
C +Y ++I + + + EL E++ + Y ++ +L K+G ++AI +
Sbjct: 1430 CPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMF 1489
Query: 331 EKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSH 390
++M +G PD +N L+ L R + EA+ + M E+G PD +++N ++ +
Sbjct: 1490 DEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMR-RMQEHGCIPDINSYNIILNGLAK 1548
Query: 391 HGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLD 450
G +A +L M K +P+V +++ +L + G +E S+L+ +M N D
Sbjct: 1549 TGGPHRAMEMLSNM-KQSTVRPDVVSYNTVLGALSHAGMFEEA-SKLMKEM-NTLGFEYD 1605
Query: 451 ITTYTLVIHGLCRAN 465
+ TY+ ++ + + +
Sbjct: 1606 LITYSSILEAIGKVD 1620
>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 584
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 161/309 (52%), Gaps = 5/309 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +++ L K Q + E+M + G L+T VM + G+ +DA + FDE+
Sbjct: 236 YTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMR 295
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVD 254
G+ N T N L+ LC+E K A V ++KS I PN T+N I G+C + ++
Sbjct: 296 ERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLG 355
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
+A +++K G P +++Y+ ++ +C++ + S +++ EM+ +G P+ VTYT ++
Sbjct: 356 KALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILI 415
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
A+S + E+AI++ M+ +G PD ++ LI+ R+ EA +++ M E
Sbjct: 416 DTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFK-SMVEKKF 474
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
P+ +NTM+ + G +A + EM + E PNV ++ +++ K K+ E
Sbjct: 475 EPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKE-LPPNVASYRYMIEVLCKERKSKEA- 532
Query: 435 SQLLDDMVN 443
L++ M++
Sbjct: 533 EGLVEKMID 541
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 156/332 (46%), Gaps = 9/332 (2%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTF 240
G+ E A F E+G FGL N T +L+ L K G + ++ +++ + PN HT+
Sbjct: 212 GEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTY 271
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
N ++ CK R +A EM+ G +++Y+T+I CR+ ++ E++D+M++
Sbjct: 272 NCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKS 331
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
G PN++TY T++ +A+ + +K G P +N L+ +
Sbjct: 332 DGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSG 391
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
A V + EM E G+ P T+ +I F+ + EKA + M +L P+V T+ L
Sbjct: 392 AGKVVK-EMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEEL-GLTPDVHTYSVL 449
Query: 421 LKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH 480
+ G+ +E S+L MV K ++ T+V+ G C+ A LF+EM
Sbjct: 450 IHGFCIKGRMNEA-SRLFKSMVEKKFEPNEVIYNTMVL-GYCKEGSSYRALRLFREMEEK 507
Query: 481 DITPRYQTCRLILD----EVKQKHMYDAAEKI 508
++ P + R +++ E K K EK+
Sbjct: 508 ELPPNVASYRYMIEVLCKERKSKEAEGLVEKM 539
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 160/328 (48%), Gaps = 10/328 (3%)
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHT 239
AG+ E + EL FG N L+D CK+G++E A+ +F E+ K + N T
Sbjct: 176 AGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWT 235
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+ + IHG K + ++M+ HG P + +Y+ ++ C+ +++ DEM+
Sbjct: 236 YTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMR 295
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
+G N+VTY T++ L + EA + ++MK G P+ +N LI ++
Sbjct: 296 ERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLG 355
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
+A+ + + ++ G++P T+N +++ F G A V++EM + KP+ T+
Sbjct: 356 KALSLCR-DLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEE-RGIKPSKVTYTI 413
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
L+ + ++ ++ + QL M + L+ D+ TY+++IHG C + A LFK M+
Sbjct: 414 LIDTFARSDNMEKAI-QLRSSM-EELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVE 471
Query: 480 HDITPR---YQTCRLILDEVKQKHMYDA 504
P Y T ++L K+ Y A
Sbjct: 472 KKFEPNEVIYNT--MVLGYCKEGSSYRA 497
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 154/331 (46%), Gaps = 4/331 (1%)
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFI 244
+ ++ F+E+ G + N LL + F E K + + ++F I I
Sbjct: 111 DSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKIKVVLDVYSFGIVI 170
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
G C+ ++++ + E++ G P V+ Y+T+I C++ K +L EM G
Sbjct: 171 KGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLV 230
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
N TYT ++ L K+G ++ + EKM+ G P+ +NC++ L + R ++A V
Sbjct: 231 ANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKV 290
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
+ EM E GV+ + T+NT+I +A V+++M K + PN+ T++ L+
Sbjct: 291 FD-EMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQM-KSDGINPNLITYNTLIDGF 348
Query: 425 FKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
K + LS D + LS + TY +++ G C+ A + KEM I P
Sbjct: 349 CGVRKLGKALSLCRD--LKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKP 406
Query: 485 RYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
T +++D + + A ++ + M++L
Sbjct: 407 SKVTYTILIDTFARSDNMEKAIQLRSSMEEL 437
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 6/216 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++D VR++ + +L ++ S+G +L T ++ F G A + E+
Sbjct: 341 YNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEME 400
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELA---RSVFLELKSCIPPNAHTFNIFIHGWCKINR 252
G++ + T +L+DT + +E A RS EL + P+ HT+++ IHG+C R
Sbjct: 401 ERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELG--LTPDVHTYSVLIHGFCIKGR 458
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
++EA + M P + Y+T++ YC++ + + L EM+ + PPNV +Y
Sbjct: 459 MNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRY 518
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
++ L K +EA + EKM G P N +
Sbjct: 519 MIEVLCKERKSKEAEGLVEKMIDSGIGPSDSILNLI 554
>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
Length = 653
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 168/333 (50%), Gaps = 14/333 (4%)
Query: 135 EIYEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQWEDAVRT 190
+Y ++D + K ++ +L+ M K ++V NT V++ A +WE A
Sbjct: 296 RMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNT---VLKGLCSAERWEQAEEL 352
Query: 191 FDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWC 248
E+ + T N+L+D C+ G V + ++ C+P + T+ I+G+C
Sbjct: 353 LAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVP-DVITYTTVINGFC 411
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
K +DEA ++ M GC P ISY+ +++ C + +L+ +M QGC PN V
Sbjct: 412 KEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPV 471
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
T+ TV+++L K G E+AI + ++M + G PD ++ +I LG+A + EA+ + V
Sbjct: 472 TFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNV- 530
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M G++P+T ++++ + S G + + + + + + + ++ ++ S K G
Sbjct: 531 MVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVT-IRSDAVLYNAVISSLCKRG 589
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGL 461
TD + + L MV+ + + +TYT++I GL
Sbjct: 590 GTDRAI-EFLAYMVSSGCMP-NESTYTILIRGL 620
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 188/392 (47%), Gaps = 14/392 (3%)
Query: 122 RWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGA 181
R A S P ++ + ++ + + R D + ++L+EM + + + V+ + +
Sbjct: 104 RLAASVPVPPNAYTYFPVVRALCARGRIADAL-SVLDEMRRRGCAPIPPMYHVILEAACS 162
Query: 182 ----GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEG-KVELARSVFLELKSCIP-- 234
G + AVR +L G + NL+L+ +C +G V+ A + +L +
Sbjct: 163 RGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCD 222
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYEL 294
P+ ++N + G C R Q ++EM GC P V++++T+I CR F +V+++
Sbjct: 223 PDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQV 282
Query: 295 LDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGR 354
L +M GC P++ Y TV+ + K G E A I ++M G KP+ +N ++ L
Sbjct: 283 LAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCS 342
Query: 355 ASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH-CKPN 413
A R ++A + EM +N D TFN ++ F +G + +LE+M LEH C P+
Sbjct: 343 AERWEQAEELL-AEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQM--LEHGCVPD 399
Query: 414 VQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLL 473
V T+ ++ K G DE + LL M + +YT+V+ GLC A + A L
Sbjct: 400 VITYTTVINGFCKEGLIDEAV-MLLKSMA-ACGCRPNTISYTIVLKGLCSAERWVDAEDL 457
Query: 474 FKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
+MI +P T +++ + +K + + A
Sbjct: 458 MSQMIEQGCSPNPVTFNTVINFLCKKGLVEQA 489
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 160/349 (45%), Gaps = 18/349 (5%)
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF-----LE 228
V+R G+ DA+ DE+ G +++L+ C G RS L
Sbjct: 121 VVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLH 180
Query: 229 LKSCIPPNAHTFNIFIHGWC-KINRVDEAQWTIQEM-KGHGCHPCVISYSTIIQSYCRQY 286
+ C + N+ ++ C + VDEA ++++ GC P V+SY+ +++ C
Sbjct: 181 GRGC-ALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAK 239
Query: 287 NFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFN 346
+ +V +L++EM GCPPNVVT+ T++ YL ++G FE ++ +M G PD R +
Sbjct: 240 RWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYA 299
Query: 347 CLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNK 406
++ + + ++ A + MP G+ P+ +NT++ E+A +L EM
Sbjct: 300 TVLDGVCKEGHLEVAHEILD-RMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFD 358
Query: 407 LEHCKPNVQTFHPLLKSCFKTG---KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCR 463
C + TF+ L+ + G + E L Q+L+ H D+ TYT VI+G C+
Sbjct: 359 -NDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLE-----HGCVPDVITYTTVINGFCK 412
Query: 464 ANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
+ A +L K M P + ++L + + AE + + M
Sbjct: 413 EGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQM 461
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 148/317 (46%), Gaps = 20/317 (6%)
Query: 207 NLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
N ++ C+ G++ AR + + +PPNA+T+ + C R+ +A + EM+
Sbjct: 87 NAMVSGYCRAGQLASARRLAASVP--VPPNAYTYFPVVRALCARGRIADALSVLDEMRRR 144
Query: 267 GCHPCVISYSTIIQSYCRQ---YNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLA-KSGD 322
GC P Y I+++ C + F +L ++ +GC +V V++ + + G
Sbjct: 145 GCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGS 204
Query: 323 FEEAIRITEKMKI-VGSKPDSRFFNCLIYTL---GRASRVQEAVYVYQVEMPENGVAPDT 378
+EA+R+ + G PD +N ++ L R RVQ+ + EM G P+
Sbjct: 205 VDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLME----EMVRVGCPPNV 260
Query: 379 STFNTMITMFSHHGHHEKAFHVLEEMNKLEH-CKPNVQTFHPLLKSCFKTGKTDECLSQL 437
TFNT+I +G E+ VL +M ++H C P+++ + +L K G E ++
Sbjct: 261 VTFNTLIGYLCRNGLFERVHQVLAQM--VDHGCTPDIRMYATVLDGVCKEGHL-EVAHEI 317
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVK 497
LD M + L ++ Y V+ GLC A + E A L EM +D T +++D
Sbjct: 318 LDRM-PSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFC 376
Query: 498 QKHM-YDAAEKIEAVMK 513
Q + Y E +E +++
Sbjct: 377 QNGLVYRVIELLEQMLE 393
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 102/229 (44%), Gaps = 6/229 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAK--VMRRFSGAGQWEDAVRTFDEL 194
Y +++ K +D+ LL+ M+ NTI+ V++ A +W DA ++
Sbjct: 403 YTTVINGFCKEGLIDEAVMLLKSMAACGCRP-NTISYTIVLKGLCSAERWVDAEDLMSQM 461
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKINR 252
G N T N +++ LCK+G VE A + + L C P+ +++ I G K +
Sbjct: 462 IEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGC-SPDLISYSTVIDGLGKAGK 520
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
DEA + M G P I YS+I + ++ ++V ++ D +Q + V Y
Sbjct: 521 TDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNA 580
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
V+S L K G + AI M G P+ + LI L V+EA
Sbjct: 581 VISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEA 629
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 76/168 (45%), Gaps = 2/168 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
+ +++ L K ++Q LL++M G L + + V+ AG+ ++A+ + +
Sbjct: 473 FNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMV 532
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVD 254
G+ NT + + L KEG++ +F ++ I +A +N I CK D
Sbjct: 533 NKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTD 592
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
A + M GC P +Y+ +I+ + + E+L E+ ++G
Sbjct: 593 RAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 640
>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
Length = 939
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 103/409 (25%), Positives = 186/409 (45%), Gaps = 24/409 (5%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS 161
L+ + R + D +AL +FR A S P ++ ++ IL + R+ RALL +
Sbjct: 72 LLQAALRRVRLDPDAALHLFRLAPSRPSLVSHAQ----LLHILARARRFHDARALLSSLP 127
Query: 162 KGHIVTLNTIAKVMRRF--------------SGAGQWEDAVRTFDELGTFGLEKNTETMN 207
+A+V R F + AGQ A+ FD +G G + + N
Sbjct: 128 PHAEPLFPHLAEVYRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCN 187
Query: 208 LLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
LL+ L + G +A V+ +++ + + P+ T I +C+ RV +A ++EM+G
Sbjct: 188 RLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGM 247
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
G +++Y ++ YC +L+ +Q +G PNVVTYT ++ K G EEA
Sbjct: 248 GLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEA 307
Query: 327 IRITEKMKIVGS-KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMI 385
R+ ++MK G D + +I + R+ +A V EM + G+ + +NTMI
Sbjct: 308 ERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRN-EMRDAGIHVNLFVYNTMI 366
Query: 386 TMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKH 445
G E+ VL+EM + +P+ +++ L+ + G + + M+ ++
Sbjct: 367 NGLCKLGRMEEVQKVLQEMEDV-GMRPDKYSYNTLIDGYCREGSMRKAFE--MCRMMVRN 423
Query: 446 HLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
L+ TY ++ G C + + A L+ M+ + P +C +LD
Sbjct: 424 GLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLD 472
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 130/517 (25%), Positives = 212/517 (41%), Gaps = 95/517 (18%)
Query: 78 SSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSAL--GIFRWAGSCPGYEHSSE 135
SS VF + + +++ + L+NKL+ D +A+ G R AG P
Sbjct: 165 SSALNVFDGMGKVGCRPSLRSCNRLLNKLVQS-GDPGMAAMVYGQMRIAGVLPD------ 217
Query: 136 IYEMMVDILGKVRQMD----QMRALLEEMSKGHIVTLNTIA--KVMRRFSGAGQWEDAVR 189
E V I+ K D Q +EEM +G + +N +A VM + G G EDA R
Sbjct: 218 --EFTVAIMAKAYCRDGRVAQAVEFVEEM-EGMGLEVNLVAYHAVMDCYCGMGWTEDARR 274
Query: 190 TFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK------------------- 230
+ L GL N T LL+ CK+G++E A V E+K
Sbjct: 275 ILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGY 334
Query: 231 ------------------SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCV 272
+ I N +N I+G CK+ R++E Q +QEM+ G P
Sbjct: 335 CQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDK 394
Query: 273 ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEK 332
SY+T+I YCR+ + K +E+ M G +TY T++ ++A+R+
Sbjct: 395 YSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFL 454
Query: 333 MKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
M G P+ + L+ L +A + ++A+ +++ E G+A + TFNT+I G
Sbjct: 455 MLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWK-ETLARGLAKNVITFNTVINGLCKIG 513
Query: 393 HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDM----------- 441
+A +L+ M +L C P+ T+ L K G+ + L++ M
Sbjct: 514 RMAEAEELLDRMKEL-RCPPDSLTYRTLFDGYCKLGQLGTA-THLMNKMEHLGFAPSVEM 571
Query: 442 ----------------VNKHH-------LSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
VN H LS ++ TY +I G C+ A L+ EM+
Sbjct: 572 FNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMV 631
Query: 479 GHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
+ + P C ++ ++ D A V++KL
Sbjct: 632 NNGMNPNVFICSALMSCFYKEGKVDEA---NLVLQKL 665
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 160/358 (44%), Gaps = 29/358 (8%)
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHT 239
AG+ E A+ + E GL KN T N +++ LCK G++ A + +K PP++ T
Sbjct: 477 AGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLT 536
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+ G+CK+ ++ A + +M+ G P V +++ I + + KV ++ EM
Sbjct: 537 YRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMS 596
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
A+G PN+VTY +++ K G+ EA + +M G P+ + L+ + +V
Sbjct: 597 ARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVD 656
Query: 360 EAVYVYQ---------------VEMPENGVAPDTST----------FNTMITMFSHHGHH 394
EA V Q +E+ + DT +N +I G
Sbjct: 657 EANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRI 716
Query: 395 EKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTY 454
A + E + + P+ T+ L+ C +G DE S L D++ L+ +I TY
Sbjct: 717 ADAKSLFESLRN-KRFLPDNFTYSSLIHGCAASGSIDEAFS--LRDVMLSAGLTPNIITY 773
Query: 455 TLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
+I+GLC++ K A LF ++ I+P T ++DE ++ A K++ M
Sbjct: 774 NSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKM 831
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/404 (23%), Positives = 169/404 (41%), Gaps = 30/404 (7%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
+Y M++ L K+ +M++++ +L+EM G + ++ + G A +
Sbjct: 361 VYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMM 420
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELA-RSVFLELKSCIPPNAHTFNIFIHGWCKINRV 253
GL T T N LL C ++ A R FL LK + PN + + + G K +
Sbjct: 421 VRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKT 480
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
++A +E G VI+++T+I C+ ++ ELLD M+ CPP+ +TY T+
Sbjct: 481 EQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTL 540
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
K G A + KM+ +G P FN I A + + ++ EM G
Sbjct: 541 FDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHS-EMSARG 599
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
++P+ T+ +I + G+ +A ++ EM PNV L+ +K GK DE
Sbjct: 600 LSPNLVTYGALIAGWCKEGNLHEACNLYFEMVN-NGMNPNVFICSALMSCFYKEGKVDEA 658
Query: 434 -------------------------LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
+S ++D + + + S ++ + ++I GLC++ +
Sbjct: 659 NLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANV-MWNVIIFGLCKSGRIA 717
Query: 469 WAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
A LF+ + P T ++ D A + VM
Sbjct: 718 DAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVM 761
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 148/324 (45%), Gaps = 31/324 (9%)
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHT 239
A QW E+ GL N T L+ CKEG + A +++ E+ + + PN
Sbjct: 582 AKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFI 641
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKG----HGC----------------------HPCVI 273
+ + + K +VDEA +Q++ GC H +
Sbjct: 642 CSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANV 701
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
++ II C+ + L + ++ + P+ TY++++ A SG +EA + + M
Sbjct: 702 MWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVM 761
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
G P+ +N LIY L ++ ++ AV ++ ++ G++P+ T+NT+I + G
Sbjct: 762 LSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFN-KLQSKGISPNGITYNTLIDEYCKEGK 820
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
+AF + ++M + E +P V T+ L+ G +E + +LLD M+ ++++ + T
Sbjct: 821 TTEAFKLKQKMVE-EGIQPTVITYSILIYGLCTQGYMEEAI-KLLDQMI-ENNVDPNYIT 877
Query: 454 YTLVIHGLCRANKCEWAYLLFKEM 477
Y +IHG ++ E L+ EM
Sbjct: 878 YCTLIHGYIKSGNMEEISKLYDEM 901
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 112/221 (50%), Gaps = 3/221 (1%)
Query: 129 GYEHSSEI-YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLN-TIAKVMRRFSGAGQWED 186
G HS+ + + +++ L K ++ ++L E + + N T + ++ + +G ++
Sbjct: 694 GNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDE 753
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIH 245
A D + + GL N T N L+ LCK GK+ A ++F +L+S I PN T+N I
Sbjct: 754 AFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLID 813
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
+CK + EA Q+M G P VI+YS +I C Q + +LLD+M P
Sbjct: 814 EYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDP 873
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFN 346
N +TY T++ KSG+ EE ++ ++M I G P + N
Sbjct: 874 NYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTNWIGN 914
>gi|326511761|dbj|BAJ92025.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 489
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 150/312 (48%), Gaps = 18/312 (5%)
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHT 239
+ A TF + GL E+ N+ + + E+A S F E++ C I PN +T
Sbjct: 139 GNKLSQATLTFRAMRAHGLLPRVESCNVFISAALCLKRPEIAVSFFREMRRCRISPNMYT 198
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYN-FSKVYELLDEM 298
N+ + +C + RV +A + EM G V+S++T+I +YCR++ EL M
Sbjct: 199 ANMLLRAFCALGRVADAAMVLDEMPDWGVDRTVVSFNTLIAAYCREHGGLEHALELKKRM 258
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL------ 352
+ +G P+ +TY T++ L K G +A R+ +M+ + P++ FN LIY
Sbjct: 259 ELEGLTPSELTYNTIIHGLCKEGRMRQANRLLSEMRAMRVVPNTVTFNTLIYGYVMHGDN 318
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
G SRV E EM + GV D T+N +I G +KA H+ +++++ +P
Sbjct: 319 GTTSRVHE-------EMVKKGVELDIVTYNALILGLCRDGKIKKAEHLFQQLDR-PKLEP 370
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
N TF L+ KT ++ L QLL+ M K + TY +VI C+ E A
Sbjct: 371 NASTFSALILGHCKTQNSERAL-QLLNVM-KKSGFHPNYDTYKIVISTFCKNKDFEGAVD 428
Query: 473 LFKEMIGHDITP 484
+ KE++ + P
Sbjct: 429 VMKELLEMRMAP 440
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 127/266 (47%), Gaps = 12/266 (4%)
Query: 170 TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKE-GKVELARSVFLE 228
T ++R F G+ DA DE+ +G+++ + N L+ C+E G +E A LE
Sbjct: 198 TANMLLRAFCALGRVADAAMVLDEMPDWGVDRTVVSFNTLIAAYCREHGGLEHA----LE 253
Query: 229 LKS-----CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYC 283
LK + P+ T+N IHG CK R+ +A + EM+ P ++++T+I Y
Sbjct: 254 LKKRMELEGLTPSELTYNTIIHGLCKEGRMRQANRLLSEMRAMRVVPNTVTFNTLIYGYV 313
Query: 284 RQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSR 343
+ + +EM +G ++VTY ++ L + G ++A + +++ +P++
Sbjct: 314 MHGDNGTTSRVHEEMVKKGVELDIVTYNALILGLCRDGKIKKAEHLFQQLDRPKLEPNAS 373
Query: 344 FFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEE 403
F+ LI + + A+ + V M ++G P+ T+ +I+ F + E A V++E
Sbjct: 374 TFSALILGHCKTQNSERALQLLNV-MKKSGFHPNYDTYKIVISTFCKNKDFEGAVDVMKE 432
Query: 404 MNKLEHCKPNVQTFHPLLKSCFKTGK 429
+ ++ P+ H ++ K K
Sbjct: 433 LLEMRMA-PDKVLLHEFFEALSKAKK 457
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 105/242 (43%), Gaps = 10/242 (4%)
Query: 165 IVTLNT-IAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELAR 223
+V+ NT IA R G E A+ + GL + T N ++ LCKEG++ A
Sbjct: 231 VVSFNTLIAAYCREHGG---LEHALELKKRMELEGLTPSELTYNTIIHGLCKEGRMRQAN 287
Query: 224 SVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSY 282
+ E+++ + PN TFN I+G+ +EM G +++Y+ +I
Sbjct: 288 RLLSEMRAMRVVPNTVTFNTLIYGYVMHGDNGTTSRVHEEMVKKGVELDIVTYNALILGL 347
Query: 283 CRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDS 342
CR K L ++ PN T++ ++ K+ + E A+++ MK G P+
Sbjct: 348 CRDGKIKKAEHLFQQLDRPKLEPNASTFSALILGHCKTQNSERALQLLNVMKKSGFHPNY 407
Query: 343 RFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLE 402
+ +I T + + AV V + E+ E +APD + S K H+ E
Sbjct: 408 DTYKIVISTFCKNKDFEGAVDVMK-ELLEMRMAPDKVLLHEFFEALS----KAKKLHLAE 462
Query: 403 EM 404
++
Sbjct: 463 DL 464
>gi|255561437|ref|XP_002521729.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539120|gb|EEF40716.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 629
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 190/409 (46%), Gaps = 23/409 (5%)
Query: 117 ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM--SKGHIVTLNTIAKV 174
AL F+WA + P + HS Y ++ L + D + LL+EM + G V
Sbjct: 55 ALQTFKWASNLPKFTHSQSTYRALIQKLCAFHRFDTVYQLLDEMPHAIGSPPDEEIFLTV 114
Query: 175 MRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE--LKSC 232
+R A ++ D + FG + + N +LD L K +++AR + + + S
Sbjct: 115 IRGLGRARMIPHVIKVLDLISKFGKNPSLKIFNSILDVLVKV-DIDVAREFYRKQMMGSG 173
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
+ + +TF I + G C NR+ + +Q MK G P + Y+T++ + C+ +
Sbjct: 174 VQGDDYTFAILMKGLCLTNRIGDGFRLLQVMKSRGVKPNAVVYNTLLHALCKNGKVGRAR 233
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
L+DE++ PN VT+ +++ K + +A+ + EK +G PD ++ L
Sbjct: 234 SLMDEIEE----PNDVTFNVLIAAYCKEENLVQALVLLEKSFSLGFVPDVVTMTKVVEIL 289
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
A RV EAV + + + G+ D +NT++ F G + A L+EM + + C P
Sbjct: 290 CNAGRVTEAVEMLERVEYKGGLV-DVVAYNTLLRGFCRLGKIKVAHRFLKEMER-KGCLP 347
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
NV+T++ L+ +G D L + +DM +S + TY +I GL + E
Sbjct: 348 NVETYNILISGFCDSGMFDMALD-MFNDM-KTDGISWNFDTYDTLIKGLFFGGRIEEGLK 405
Query: 473 LFKEM------IGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
+ + M G I+P Y + +L + +K+M+D A + M+KL
Sbjct: 406 ILELMEESKGGSGGRISP-YNS---VLYGLYKKNMWDEALEFLMKMEKL 450
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/424 (23%), Positives = 192/424 (45%), Gaps = 45/424 (10%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAV 188
G + ++ +Y ++ L K ++ + R+L++E+ + + VT N + + Q A+
Sbjct: 208 GVKPNAVVYNTLLHALCKNGKVGRARSLMDEIEEPNDVTFNVLIAAYCKEENLVQ---AL 264
Query: 189 RTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHG 246
++ + G + TM +++ LC G+V A + +E K + + +N + G
Sbjct: 265 VLLEKSFSLGFVPDVVTMTKVVEILCNAGRVTEAVEMLERVEYKGGLV-DVVAYNTLLRG 323
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
+C++ ++ A ++EM+ GC P V +Y+ +I +C F ++ ++M+ G N
Sbjct: 324 FCRLGKIKVAHRFLKEMERKGCLPNVETYNILISGFCDSGMFDMALDMFNDMKTDGISWN 383
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRF--FNCLIYTLGRASRVQEAV-Y 363
TY T++ L G EE ++I E M+ R +N ++Y L + + EA+ +
Sbjct: 384 FDTYDTLIKGLFFGGRIEEGLKILELMEESKGGSGGRISPYNSVLYGLYKKNMWDEALEF 443
Query: 364 VYQVE-------------------------------MPENGVAPDTSTFNTMITMFSHHG 392
+ ++E M G P+ ++ ++ F G
Sbjct: 444 LMKMEKLFPRAVDRSLRILGFCEKGAVKNAKMVFDQMINEGGTPNILVYDCLVHGFCQEG 503
Query: 393 HHEKAFHVLEEMNKLEHCKPNVQT-FHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDI 451
+ +AF ++ EM + H V + F+ L+ GK DE +LLDDMV + + D
Sbjct: 504 NLREAFELMNEM--VGHGYFLVASGFNALIHGFCGQGK-DESALKLLDDMVGRGCVP-DR 559
Query: 452 TTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAV 511
TY+ +I LCR + A +F +MI ITP T +L + ++ ++ + + V
Sbjct: 560 GTYSPLIDALCRKGNFQKALSIFNQMIEKGITPDSSTWNSLLIRLSKEIIWLENKNVFHV 619
Query: 512 MKKL 515
K+L
Sbjct: 620 NKQL 623
>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
Length = 716
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 164/334 (49%), Gaps = 14/334 (4%)
Query: 165 IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARS 224
+VT NTI M R +G E A F E+ GL + T N L++ CK G ++ A
Sbjct: 337 VVTYNTIIHGMFR---SGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALW 393
Query: 225 VFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYC 283
+F +LK + + P+ T+NI + G+C++ ++EA+ QEM GC P V +Y+ ++
Sbjct: 394 LFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSR 453
Query: 284 RQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSR 343
+ N + V E DEM ++G P+ Y T +S G EA ++TE M G D+
Sbjct: 454 KVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTV 513
Query: 344 FFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEE 403
+N + L ++ +++A YV ++M +G+ PD T+ +I G +A + +
Sbjct: 514 TYNIFLDGLCKSGNLKDA-YVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDG 572
Query: 404 MNKLEHCKPNVQTFHPLLKSCFKTGKTDEC---LSQLLDDMVNKHHLSLDITTYTLVIHG 460
M + P+ T+ + + + G ++L++ V + + TY ++IH
Sbjct: 573 M-LVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEV-----TYNVLIHA 626
Query: 461 LCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
LCR + AY F EM+ ++P T L++D
Sbjct: 627 LCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLID 660
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 167/350 (47%), Gaps = 45/350 (12%)
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-- 231
V+R +W+D + E+ G+E + T N LLD+ +EG+V+ A + E+++
Sbjct: 202 VLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARP 261
Query: 232 --CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFS 289
C+P + T+N+ I+G + +++A + M+ +++ +I Y + +
Sbjct: 262 GGCLPSDV-TYNVVINGLARKGELEKAAQLVDRMR-MSKKASAFTFNPLITGYFARGSVE 319
Query: 290 KVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
K L EM+ +G P VVTY T++ + +SG+ E A +M+ +G PD +N LI
Sbjct: 320 KAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLI 379
Query: 350 YTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH 409
+A ++EA++++ ++ G+AP T+N ++ + G E+A +EM + +
Sbjct: 380 NGYCKAGNLKEALWLFG-DLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVE-QG 437
Query: 410 CKPNVQTFHPLLKS-------------------------CFK----------TGKTDECL 434
C+P+V T+ L+ CF G T E
Sbjct: 438 CQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAF 497
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
QL + M+++ +S D TY + + GLC++ + AY+L+ +M+ + P
Sbjct: 498 -QLTEVMISR-GISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQP 545
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 134/269 (49%), Gaps = 9/269 (3%)
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
+PP N+ + R D+ + EM G P +++Y+T++ S+ R+ +
Sbjct: 192 VPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAA 251
Query: 293 ELLDEMQAQ--GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRF-FNCLI 349
+LL EM+A+ GC P+ VTY V++ LA+ G+ E+A ++ ++M++ SK S F FN LI
Sbjct: 252 KLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRM--SKKASAFTFNPLI 309
Query: 350 YTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH 409
V++A + Q+EM G+ P T+NT+I G+ E A EM +
Sbjct: 310 TGYFARGSVEKAGAL-QLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAM-G 367
Query: 410 CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEW 469
P++ T++ L+ K G E L L D+ + L+ + TY +++ G CR E
Sbjct: 368 LLPDLITYNSLINGYCKAGNLKEAL-WLFGDL-KRAGLAPSVLTYNILLDGYCRLGDLEE 425
Query: 470 AYLLFKEMIGHDITPRYQTCRLILDEVKQ 498
A +EM+ P T ++++ ++
Sbjct: 426 ARRFKQEMVEQGCQPDVSTYTILMNGSRK 454
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 145/331 (43%), Gaps = 16/331 (4%)
Query: 95 AIQPSHYLVNKLIHRF--KDDWKSALGIF---RWAGSCPGYEHSSEIYEMMVDILGKVRQ 149
+ P N LI+ + + K AL +F + AG P S Y +++D ++
Sbjct: 367 GLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAP----SVLTYNILLDGYCRLGD 422
Query: 150 MDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNL 208
+++ R +EM +G ++T +M FDE+ + GL+ + N
Sbjct: 423 LEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNT 482
Query: 209 LLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG 267
+ G A + + + I + T+NIF+ G CK + +A +M G
Sbjct: 483 RISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDG 542
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
P I+Y+ +I ++C + + ++ D M G PP+ VTYT + + G+ A
Sbjct: 543 LQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAY 602
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITM 387
+KM G +P+ +N LI+ L R R A Y + EM E G++P+ T+ +I
Sbjct: 603 GWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLA-YQHFHEMLERGLSPNKYTYTLLIDG 661
Query: 388 FSHHGHHEKAFHVLEEMNK----LEHCKPNV 414
G+ E+A + EM++ +HC N
Sbjct: 662 NCKEGNWEEAIRLYSEMHQHGIHPDHCTHNA 692
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 112/239 (46%), Gaps = 9/239 (3%)
Query: 259 TIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLA 318
+EM HG P + + ++++ + + + + EM G P++VTY T++
Sbjct: 183 AFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFF 242
Query: 319 KSGDFEEAIRITEKM--KIVGSKPDSRFFNCLIYTLGRASRVQEAV-YVYQVEMPENGVA 375
+ G ++A ++ +M + G P +N +I L R +++A V ++ M + A
Sbjct: 243 REGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKKASA 302
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLS 435
TFN +IT + G EKA + EM E P V T++ ++ F++G +
Sbjct: 303 ---FTFNPLITGYFARGSVEKAGALQLEMEN-EGIVPTVVTYNTIIHGMFRSGNVEAARM 358
Query: 436 QLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
+ ++ + L D+ TY +I+G C+A + A LF ++ + P T ++LD
Sbjct: 359 KFVE--MRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLD 415
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTF 240
G A F ++ G+ N T N+L+ LC+ G+ LA F E L+ + PN +T+
Sbjct: 596 GNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTY 655
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSY 282
+ I G CK +EA EM HG HP +++ + + +
Sbjct: 656 TLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKGF 697
>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
Length = 658
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 126/526 (23%), Positives = 236/526 (44%), Gaps = 81/526 (15%)
Query: 14 IPLNPLTSRIRFHSSSENCSHIVSSSPIE-----SYCSDGARLDHHQVLCVDSPRLPDID 68
+P P+ RI F S N S ++SS+P++ + + + + + V++P I
Sbjct: 1 MPKCPIPIRISFFSYFLNESRLLSSNPVKFSIHLRFSASSVSVSPNPSMEVETPLEAPIS 60
Query: 69 --VIISKVHVGSSE--DEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDD-----WKSALG 119
+ S +GS + D S+ +++ A V KL+ R + + +S +
Sbjct: 61 EQMFKSAPKMGSFKLGDSTLSSMIENY---ANLGDFASVEKLLSRIRLENRVIIERSFIV 117
Query: 120 IFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFS 179
+FR G E + +++ MVD E K + + N++ V+
Sbjct: 118 VFRAYGKAHLPEKAVDLFHRMVD---------------EFRCKRSVKSFNSVLNVI---I 159
Query: 180 GAGQWEDAVRTFDEL----GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCI 233
G + + +D + + N + NL++ LCK G V+ A VF + K C+
Sbjct: 160 NEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCL 219
Query: 234 PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
P + +T+ + G CK R+DEA + EM+ GC P + Y+ +I C++ + S+V +
Sbjct: 220 P-DGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTK 278
Query: 294 LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM---KIV-------------- 336
L+D M +GC PN VTY T++ L G ++A+ + E+M K +
Sbjct: 279 LVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLV 338
Query: 337 ------------------GSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDT 378
G + + ++ LI L + + +EA+ +++ +M E G P+
Sbjct: 339 KQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWK-KMAEKGCRPNI 397
Query: 379 STFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLL 438
++ +I G +A +L M C PNV T+ L+K FKTG ++E + Q+
Sbjct: 398 VVYSAVIDGLCREGKPNEAKEILNGMIS-SGCLPNVYTYSSLMKGFFKTGLSEEAI-QVW 455
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
+M ++ S + Y+++I GLC + + A +++ +M+ I P
Sbjct: 456 REM-DETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKP 500
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 170/389 (43%), Gaps = 40/389 (10%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDA 187
G S IY +++D L K + ++ L++ M KG T ++ G+ + A
Sbjct: 252 GCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKA 311
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGK-VELARSVFLELKSCIPPNAHTFNIFIHG 246
V + + + N T L++ L K+ + ++ AR + + N H +++ I G
Sbjct: 312 VSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISG 371
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
K + +EA ++M GC P ++ YS +I CR+ ++ E+L+ M + GC PN
Sbjct: 372 LFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPN 431
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
V TY+++M K+G EEAI++ +M G + ++ LI L RV+EA+ V+
Sbjct: 432 VYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWS 491
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
+M G+ PDT +++MI G + A + EM L +P Q
Sbjct: 492 -KMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEM--LCQEEPKSQP---------- 538
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
D+ TY +++ GLC A L M+ P
Sbjct: 539 -----------------------DVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDV 575
Query: 487 QTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
TC L+ + +K D+ E+ + +++L
Sbjct: 576 ITCNTFLNTLSEKS--DSCEEGRSFLEEL 602
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 113/242 (46%), Gaps = 10/242 (4%)
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI 329
P +S++ +I++ C+ + E+ M + C P+ TY T+M L K +EA+ +
Sbjct: 185 PNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLL 244
Query: 330 TEKMKIVGSKPDSRFFNCLIYTL---GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
++M+ G P +N LI L G SRV + V M G P+ T+NT+I
Sbjct: 245 LDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVD----NMFLKGCFPNEVTYNTLIH 300
Query: 387 MFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHH 446
G +KA +LE M C PN T+ L+ K + + ++LL M + +
Sbjct: 301 GLCLKGKLDKAVSLLERMVS-SKCIPNDVTYGTLINGLVKQRRAMDG-ARLLISMEERGY 358
Query: 447 LSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAE 506
L+ Y+++I GL + K E A L+K+M P ++D + ++ + A+
Sbjct: 359 -RLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAK 417
Query: 507 KI 508
+I
Sbjct: 418 EI 419
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 87/194 (44%), Gaps = 5/194 (2%)
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
T ++++ A GDF ++ ++++ R F + G+A ++AV ++
Sbjct: 79 TLSSMIENYANLGDFASVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPEKAVDLFHRM 138
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM---NKLEHCKPNVQTFHPLLKSCF 425
+ E +FN+++ + + G + + + + N + PN +F+ ++K+
Sbjct: 139 VDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALC 198
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
K G D + ++ M K L D TY ++ GLC+ + + A LL EM +P
Sbjct: 199 KLGFVDRAI-EVFRGMPEKKCLP-DGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPS 256
Query: 486 YQTCRLILDEVKQK 499
+++D + +K
Sbjct: 257 PVIYNVLIDGLCKK 270
>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
Length = 695
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 175/374 (46%), Gaps = 13/374 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK----GHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++D GK ++++ L+ EM K +VT N + +F G+ E A F
Sbjct: 238 YNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKF---GRMEKAYSYFG 294
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKIN 251
E+ G+ N T + +D CKEG V+ A +F +++ + PN T+ + G CK
Sbjct: 295 EMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAG 354
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
R+D+A + EM G P V++Y+ ++ C++ ++ +L M+ G N + YT
Sbjct: 355 RLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYT 414
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
T++ + + E A+ + +MK G + D + LI+ L + +V EA + +M
Sbjct: 415 TLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLH-KMAG 473
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
G+ P+T + T++ G +A +L ++ +PNV T+ L+ K G
Sbjct: 474 CGLRPNTVIYTTIMDALFKAGKESEAVALLHKILD-SGFQPNVVTYCALIDGLCKAGSIS 532
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT-PRYQTCR 490
E +S + + + L ++ YT +I G C+ A L EMI ++ +
Sbjct: 533 EAISHF--NKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTS 590
Query: 491 LILDEVKQKHMYDA 504
LI +KQ ++ DA
Sbjct: 591 LIDGYMKQANLQDA 604
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 139/305 (45%), Gaps = 5/305 (1%)
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHT 239
AG+ +DA+ DE+ GL N T +++D LCKEGKV A +V L + + N
Sbjct: 353 AGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELL 412
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+ IHG N + A + +MK G V Y T+I C+ + LL +M
Sbjct: 413 YTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMA 472
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
G PN V YTT+M L K+G EA+ + K+ G +P+ + LI L +A +
Sbjct: 473 GCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSIS 532
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
EA+ + +M E G+ P+ + +I F G KA H++ EM V +
Sbjct: 533 EAISHFN-KMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKV-VYTS 590
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
L+ K + + L + + L LD+ YT I G C N + A + EMIG
Sbjct: 591 LIDGYMKQANLQDAFA--LKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIG 648
Query: 480 HDITP 484
ITP
Sbjct: 649 TGITP 653
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 162/366 (44%), Gaps = 49/366 (13%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIP-PNAHTF 240
G +DAVR + + NT T N +L L + + L R +F +P PN TF
Sbjct: 148 GLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLF----DLLPVPNVFTF 203
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
NI I CK + EA+ MK GC P V++Y+++I Y + + +V +L+ EM+
Sbjct: 204 NIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRK 263
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFE-----------------------------------E 325
GC +VVTY +++ +K G E E
Sbjct: 264 SGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQE 323
Query: 326 AIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMI 385
A+++ +M++ G P+ + L+ +A R+ +A+ + EM G+ P+ T+ M+
Sbjct: 324 AMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLD-EMVHQGLVPNVVTYTVMV 382
Query: 386 TMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKH 445
G +A +VL M + K N + L+ F ++ L LL+ M NK
Sbjct: 383 DGLCKEGKVAEADNVLSLMER-GGVKANELLYTTLIHGHFMNNNSERAL-DLLNQMKNK- 439
Query: 446 HLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
+ LD++ Y +I GLC+ K + A L +M G + P I+D ++ A
Sbjct: 440 GMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDA-----LFKAG 494
Query: 506 EKIEAV 511
++ EAV
Sbjct: 495 KESEAV 500
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 123/262 (46%), Gaps = 8/262 (3%)
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
+D+A + ++ P + + I+ R V L D + PNV T+
Sbjct: 150 LDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFDLLPV----PNVFTFNI 205
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN 372
V+ +L K G+ EA + +MK +G PD +N LI G+ ++E + EM ++
Sbjct: 206 VIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVS-EMRKS 264
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
G A D T+N +I FS G EKA+ EM K + NV TF + + K G E
Sbjct: 265 GCAADVVTYNALINCFSKFGRMEKAYSYFGEM-KRQGVVANVVTFSTFVDAFCKEGLVQE 323
Query: 433 CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLI 492
+ +L M + + + T YT ++ G C+A + + A +L EM+ + P T ++
Sbjct: 324 AM-KLFAQMRVRGMMPNEFT-YTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVM 381
Query: 493 LDEVKQKHMYDAAEKIEAVMKK 514
+D + ++ A+ + ++M++
Sbjct: 382 VDGLCKEGKVAEADNVLSLMER 403
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 151/337 (44%), Gaps = 19/337 (5%)
Query: 38 SSPIESYCSDGARLDHHQVLC---VDSPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCN 94
+S ++ C G RLD VL V +P++ V E +V ++ D+V +
Sbjct: 344 TSLVDGTCKAG-RLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEA---DNVLS 399
Query: 95 AIQPSHYLVNKLI-------HRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKV 147
++ N+L+ H ++ + AL + + G E +Y ++ L K
Sbjct: 400 LMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKN-KGMELDVSLYGTLIWGLCKD 458
Query: 148 RQMDQMRALLEEMSKGHIVTLNTI--AKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTET 205
+++D+ ++LL +M+ G + NT+ +M AG+ +AV ++ G + N T
Sbjct: 459 QKVDEAKSLLHKMA-GCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVT 517
Query: 206 MNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
L+D LCK G + A S F +++ + PN + I G+CKI +++A + EM
Sbjct: 518 YCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMI 577
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
G + Y+++I Y +Q N + L +M G ++ YT +S +
Sbjct: 578 DKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQ 637
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
EA + +M G PD +NCLI + ++EA
Sbjct: 638 EARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEA 674
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 174/346 (50%), Gaps = 5/346 (1%)
Query: 170 TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL 229
T V+ R +G A+ F ++ ++ + ++++D+LCK+G + A S+F E+
Sbjct: 241 TYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM 300
Query: 230 K-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
+ I + T++ I G C + D+ ++EM G P V+++S +I + ++
Sbjct: 301 EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKL 360
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
+ EL +EM +G P+ +TY +++ K EA ++ + M G +PD ++ L
Sbjct: 361 LEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSIL 420
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
I + +A RV + + +++ E+ G+ P+T T+NT++ F G A + +EM
Sbjct: 421 INSYCKAKRVDDGMRLFR-EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVS-R 478
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
P+V T+ LL G+ ++ L ++ + M K ++L I Y ++IHG+C A+K +
Sbjct: 479 GVPPSVVTYGILLDGLCDNGELNKAL-EIFEKM-QKSRMTLGIGIYNIIIHGMCNASKVD 536
Query: 469 WAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
A+ LF + + P T +++ + +K A+ + MK+
Sbjct: 537 DAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 582
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 142/274 (51%), Gaps = 3/274 (1%)
Query: 151 DQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLL 210
D + L E + + I + T + ++ F G+ +A ++E+ T G+ +T T N L+
Sbjct: 327 DGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLI 386
Query: 211 DTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCH 269
D CKE + A +F L + P+ T++I I+ +CK RVD+ +E+ G
Sbjct: 387 DGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLI 446
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI 329
P I+Y+T++ +C+ + EL EM ++G PP+VVTY ++ L +G+ +A+ I
Sbjct: 447 PNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEI 506
Query: 330 TEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFS 389
EKM+ +N +I+ + AS+V +A ++ + + GV PD T+N MI
Sbjct: 507 FEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLF-CSLSDKGVKPDVVTYNVMIGGLC 565
Query: 390 HHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
G +A + +M K + C P+ T++ L+++
Sbjct: 566 KKGSLSEADMLFRKM-KEDGCTPDDFTYNILIRA 598
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 167/346 (48%), Gaps = 5/346 (1%)
Query: 170 TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL 229
T + ++ F G+ +AV D + + T++ L++ LC +G+V A + +
Sbjct: 171 TFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRM 230
Query: 230 -KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
+ P+ T+ ++ CK A ++M+ V+ YS +I S C+ +F
Sbjct: 231 VEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSF 290
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
L +EM+ +G +VVTY++++ L G +++ ++ +M PD F+ L
Sbjct: 291 DDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSAL 350
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
I + ++ EA +Y EM G+APDT T+N++I F +A + + M +
Sbjct: 351 IDVFVKEGKLLEAKELYN-EMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVS-K 408
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
C+P++ T+ L+ S K + D+ + +L ++ +K + IT TLV+ G C++ K
Sbjct: 409 GCEPDIVTYSILINSYCKAKRVDDGM-RLFREISSKGLIPNTITYNTLVL-GFCQSGKLN 466
Query: 469 WAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
A LF+EM+ + P T ++LD + + A +I M+K
Sbjct: 467 AAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQK 512
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 152/327 (46%), Gaps = 11/327 (3%)
Query: 35 IVSSSPIESYCSDGARLDHHQVL--CVDSPRLPDIDVIISKVHVGSSEDEVFQS--LKQD 90
+ SS I C+DG D ++L + +PD+ + + V E ++ ++ L +
Sbjct: 310 VTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNE 369
Query: 91 HVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVR 148
+ I P N LI F ++ A +F S G E Y ++++ K +
Sbjct: 370 MITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVS-KGCEPDIVTYSILINSYCKAK 428
Query: 149 QMDQ-MRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN 207
++D MR E SKG I T ++ F +G+ A F E+ + G+ + T
Sbjct: 429 RVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYG 488
Query: 208 LLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
+LLD LC G++ A +F ++ KS + +NI IHG C ++VD+A +
Sbjct: 489 ILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDK 548
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM-SYLAKSGDFEE 325
G P V++Y+ +I C++ + S+ L +M+ GC P+ TY ++ ++L SG
Sbjct: 549 GVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSG-LIS 607
Query: 326 AIRITEKMKIVGSKPDSRFFNCLIYTL 352
++ + E+MK+ G DS +I L
Sbjct: 608 SVELIEEMKVCGFSADSSTIKMVIDML 634
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 124/273 (45%), Gaps = 5/273 (1%)
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYEL 294
P FN + + D + M+ +G + + + +I YCR+ + +
Sbjct: 97 PTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSV 156
Query: 295 LDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGR 354
L G P+ +T++T+++ G EA+ + ++M + +PD + LI L
Sbjct: 157 LGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCL 216
Query: 355 ASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNV 414
RV EA+ + M E G PD T+ ++ G+ A + +M + + K +V
Sbjct: 217 KGRVSEALVLID-RMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEE-RNIKASV 274
Query: 415 QTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLF 474
+ ++ S K G D+ LS L ++M K + D+ TY+ +I GLC K + +
Sbjct: 275 VQYSIVIDSLCKDGSFDDALS-LFNEMEMK-GIKADVVTYSSLIGGLCNDGKWDDGAKML 332
Query: 475 KEMIGHDITPRYQTCRLILDE-VKQKHMYDAAE 506
+EMIG +I P T ++D VK+ + +A E
Sbjct: 333 REMIGRNIIPDVVTFSALIDVFVKEGKLLEAKE 365
>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 864
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 169/375 (45%), Gaps = 41/375 (10%)
Query: 161 SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVE 220
+ G +V + ++ G E A ++ G ++ + LL C+ +
Sbjct: 188 ADGFVVGMIDYRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLR 247
Query: 221 LARSVF--LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTI 278
A VF + + PN+ +++I IHG C++ R++EA +M GC P +Y+ +
Sbjct: 248 DALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVL 307
Query: 279 IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM----- 333
I++ C + K + L DEM A+GC PNV TYT ++ L + G EEA + KM
Sbjct: 308 IKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGI 367
Query: 334 ------------------KIV------------GSKPDSRFFNCLIYTLGRASRVQEAVY 363
++V KP+ R FN L+ L R + +AV+
Sbjct: 368 FPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVH 427
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
+ + M +NG++PD ++N +I GH A+ +L MN + +P+ TF ++ +
Sbjct: 428 LLK-RMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFD-LEPDCLTFTAIINA 485
Query: 424 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
K GK D S L M+ K +SLD T T +I G+C K A + + ++ +
Sbjct: 486 FCKQGKAD-VASAFLGLMLRK-GISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRML 543
Query: 484 PRYQTCRLILDEVKQ 498
+ +ILD + +
Sbjct: 544 TTPHSLNVILDMLSK 558
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/444 (21%), Positives = 194/444 (43%), Gaps = 50/444 (11%)
Query: 113 DWKSALGIFRWA---GSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTL 168
+ + AL +F G+C +S Y +++ L +V ++++ L ++M KG +
Sbjct: 245 NLRDALKVFDLMSREGTCA---PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPST 301
Query: 169 NTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSV--- 225
T +++ G + A FDE+ G + N T +L+D LC++GK+E A V
Sbjct: 302 RTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRK 361
Query: 226 ----------------------------------FLELKSCIPPNAHTFNIFIHGWCKIN 251
+E ++C PN TFN + G C++
Sbjct: 362 MVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRAC-KPNVRTFNELMEGLCRVG 420
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
+ +A ++ M +G P ++SY+ +I CR+ + + Y+LL M + P+ +T+T
Sbjct: 421 KPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFT 480
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
+++ K G + A M G D LI + + ++A+++ + + +
Sbjct: 481 AIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILET-LVK 539
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
+ + N ++ M S ++ +L ++NKL P+V T+ L+ ++G
Sbjct: 540 MRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKL-GLVPSVVTYTTLVDGLIRSGDIS 598
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRL 491
L +++ ++ YT++I+GLC+ + E A L M ++P + T +
Sbjct: 599 GSFRML--ELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTV 656
Query: 492 ILDE-VKQKHMYDAAEKIEAVMKK 514
++ V + A E + A++++
Sbjct: 657 MVKGYVNNGKLDRALETVRAMVER 680
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 121/246 (49%), Gaps = 6/246 (2%)
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
+PC YS+++ S + Y M+A G ++ Y T+++ L K+G E A
Sbjct: 160 YPC---YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEM 216
Query: 329 ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF 388
K+ VG DS L+ R +++A+ V+ + E AP++ +++ +I
Sbjct: 217 FMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGL 276
Query: 389 SHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
G E+AF + ++M + + C+P+ +T+ L+K+ G D+ + L D+M+ +
Sbjct: 277 CEVGRLEEAFGLKDQMGE-KGCQPSTRTYTVLIKALCDRGLIDKAFN-LFDEMIAR-GCK 333
Query: 449 LDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
++ TYT++I GLCR K E A + ++M+ I P T +++ + A ++
Sbjct: 334 PNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFEL 393
Query: 509 EAVMKK 514
VM+K
Sbjct: 394 LTVMEK 399
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 78/170 (45%), Gaps = 1/170 (0%)
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHT 239
G+ DA+ + L + ++N++LD L K K++ ++ ++ K + P+ T
Sbjct: 524 VGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVT 583
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+ + G + + + ++ MK GC P V Y+ II C+ + +LL MQ
Sbjct: 584 YTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQ 643
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
G PN VTYT ++ +G + A+ M G + + R ++ L+
Sbjct: 644 DSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLL 693
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 82/197 (41%), Gaps = 8/197 (4%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVM-RRFSGAGQWEDAVRTFDELG 195
Y ++++ L + ++++ LL M + + VM + + G+ + A+ T +
Sbjct: 619 YTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMV 678
Query: 196 TFGLEKNTETMNLLLD--TLCKEGKVELARSVFLELKSCIPPNAHTFN----IFIHGWCK 249
G E N + LL L ++G E EL S + + + + CK
Sbjct: 679 ERGYELNDRIYSSLLRGFVLSQKGIRETDPECIKELISVVEQLGGSTSGLCIFLVTRLCK 738
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
R DE+ +Q + G + I++SYC + +K EL+ + G P+ +
Sbjct: 739 EGRTDESNGLVQTILKSGVF-LEKAIDIIMESYCSKKKHTKCVELITLVLKSGFVPSFKS 797
Query: 310 YTTVMSYLAKSGDFEEA 326
+ V+ L K GD E A
Sbjct: 798 FCLVIQGLKKEGDTERA 814
>gi|357167657|ref|XP_003581270.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Brachypodium distachyon]
Length = 560
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 176/378 (46%), Gaps = 9/378 (2%)
Query: 133 SSEIYEMMVDILGKVRQMDQMRALLEEMS--KGHIVTLNTIAKVMRRFSGAGQWEDAVRT 190
S+ Y ++ +L + + L ++M+ GH ++ + + AG + A
Sbjct: 120 SAHSYRYVISMLCQSSRHTDALKLFDQMTDQSGHFPNARFLSFLAGSCANAGFLDAAAAL 179
Query: 191 FDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWC 248
+ FG N L+++ G+V+ A ++F P+ +FN+ I G C
Sbjct: 180 LSKAPQFGCCVEAYAYNKLMNSFIGCGRVQDAVALFEGWIQGGAYSPDVWSFNVAIKGVC 239
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG-CPPNV 307
++ V +A ++ M GC P ++ + ++ CR S+ E+L +Q G C PNV
Sbjct: 240 QVGDVQKALELVERMAEFGCSPDTVTNNILVGGLCRVKEVSRGREVLRRLQRDGVCMPNV 299
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
VTYT+V+S KSG E+A+ + M G+ P++ +N LI G+A + AV VYQ
Sbjct: 300 VTYTSVISGYCKSGRMEDAMAVYNDMIGCGTTPNAVTYNVLINGYGKAGNMGSAVAVYQ- 358
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKT 427
+M PD TF+T+I + G + A EM++ + +PN TF ++ S K
Sbjct: 359 QMILRRCPPDVVTFSTLIDGYCRCGQLDDAMRTWTEMSQYQ-IQPNAHTFSIIILSFCKQ 417
Query: 428 GKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP-RY 486
++ E L + L ++ + ++ VI LC+ K + A L+ EM G P +Y
Sbjct: 418 NRSAEAL-RFLKELNMRTDIAPRAFICNPVIDVLCKGGKVDEANLILMEMEGKGCRPDKY 476
Query: 487 QTCRLILDEVKQKHMYDA 504
LI+ + + +A
Sbjct: 477 TYTILIIGHCMKGRISEA 494
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/441 (23%), Positives = 192/441 (43%), Gaps = 17/441 (3%)
Query: 77 GSSEDEVFQSLKQDHVCNAIQPS----HYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEH 132
SS ++F +L + AI PS Y+++ L + AL +F G+
Sbjct: 100 ASSTLQLFSALHSSQL--AIPPSAHSYRYVISMLCQSSRH--TDALKLFDQMTDQSGHFP 155
Query: 133 SSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTF 191
++ + +D ALL + + G V K+M F G G+ +DAV F
Sbjct: 156 NARFLSFLAGSCANAGFLDAAAALLSKAPQFGCCVEAYAYNKLMNSFIGCGRVQDAVALF 215
Query: 192 DELGTFGL-EKNTETMNLLLDTLCKEGKVELARSVFLELK--SCIPPNAHTFNIFIHGWC 248
+ G + + N+ + +C+ G V+ A + + C P+ T NI + G C
Sbjct: 216 EGWIQGGAYSPDVWSFNVAIKGVCQVGDVQKALELVERMAEFGC-SPDTVTNNILVGGLC 274
Query: 249 KINRVDEAQWTIQEMKGHG-CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
++ V + ++ ++ G C P V++Y+++I YC+ + ++M G PN
Sbjct: 275 RVKEVSRGREVLRRLQRDGVCMPNVVTYTSVISGYCKSGRMEDAMAVYNDMIGCGTTPNA 334
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
VTY +++ K+G+ A+ + ++M + PD F+ LI R ++ +A+ +
Sbjct: 335 VTYNVLINGYGKAGNMGSAVAVYQQMILRRCPPDVVTFSTLIDGYCRCGQLDDAMRTW-T 393
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKT 427
EM + + P+ TF+ +I F +A L+E+N P +P++ K
Sbjct: 394 EMSQYQIQPNAHTFSIIILSFCKQNRSAEALRFLKELNMRTDIAPRAFICNPVIDVLCKG 453
Query: 428 GKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
GK DE + +L +M K D TYT++I G C + A F +M+ +P
Sbjct: 454 GKVDEA-NLILMEMEGKG-CRPDKYTYTILIIGHCMKGRISEAITFFNKMVDTGCSPDSI 511
Query: 488 TCRLILDEVKQKHMYDAAEKI 508
T + + + M ++I
Sbjct: 512 TVNSFIGCLLKAGMPSEVDRI 532
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 133/291 (45%), Gaps = 26/291 (8%)
Query: 68 DVIISKVHVG--------SSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSA 117
D + + + VG S EV + L++D VC P+ +I + + A
Sbjct: 262 DTVTNNILVGGLCRVKEVSRGREVLRRLQRDGVC---MPNVVTYTSVISGYCKSGRMEDA 318
Query: 118 LGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM----SKGHIVTLNTIAK 173
+ ++ C G ++ Y ++++ GK M A+ ++M +VT +T+
Sbjct: 319 MAVYNDMIGC-GTTPNAVTYNVLINGYGKAGNMGSAVAVYQQMILRRCPPDVVTFSTL-- 375
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KS 231
+ + GQ +DA+RT+ E+ + ++ N T ++++ + CK+ + A EL ++
Sbjct: 376 -IDGYCRCGQLDDAMRTWTEMSQYQIQPNAHTFSIIILSFCKQNRSAEALRFLKELNMRT 434
Query: 232 CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKV 291
I P A N I CK +VDEA + EM+G GC P +Y+ +I +C + S+
Sbjct: 435 DIAPRAFICNPVIDVLCKGGKVDEANLILMEMEGKGCRPDKYTYTILIIGHCMKGRISEA 494
Query: 292 YELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDS 342
++M GC P+ +T + + L K+G E RI MKI S
Sbjct: 495 ITFFNKMVDTGCSPDSITVNSFIGCLLKAGMPSEVDRI---MKIASGSTSS 542
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 117/270 (43%), Gaps = 41/270 (15%)
Query: 138 EMMVDILGKVRQMDQMRALLEEMSKGHIVTLN--TIAKVMRRFSGAGQWEDAVRTFDELG 195
++V L +V+++ + R +L + + + N T V+ + +G+ EDA+ ++++
Sbjct: 267 NILVGGLCRVKEVSRGREVLRRLQRDGVCMPNVVTYTSVISGYCKSGRMEDAMAVYNDMI 326
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLE--LKSCIPPNAHTFNIFIHGWCKINRV 253
G N T N+L++ K G + A +V+ + L+ C PP+ TF+ I G+C+ ++
Sbjct: 327 GCGTTPNAVTYNVLINGYGKAGNMGSAVAVYQQMILRRC-PPDVVTFSTLIDGYCRCGQL 385
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDE---------------- 297
D+A T EM + P ++S II S+C+Q ++ L E
Sbjct: 386 DDAMRTWTEMSQYQIQPNAHTFSIIILSFCKQNRSAEALRFLKELNMRTDIAPRAFICNP 445
Query: 298 --------------------MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
M+ +GC P+ TYT ++ G EAI KM G
Sbjct: 446 VIDVLCKGGKVDEANLILMEMEGKGCRPDKYTYTILIIGHCMKGRISEAITFFNKMVDTG 505
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
PDS N I L +A E + ++
Sbjct: 506 CSPDSITVNSFIGCLLKAGMPSEVDRIMKI 535
>gi|225450007|ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containing protein At2g19280
[Vitis vinifera]
Length = 644
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 172/357 (48%), Gaps = 15/357 (4%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +++D L K+ + + ++L +M++ G + +++ V+ + G+ E+A+ D L
Sbjct: 259 YTIVIDSLCKMSLLKEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEEAM---DVLE 315
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
F L N N + LC +G + A VF ++ + + P+ ++ + G+CK+ +
Sbjct: 316 VFNLSPNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDIS 375
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
A + +M G P V +Y+ +I S C+ N L M +G P+VV+Y T+M
Sbjct: 376 NALKYLGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLM 435
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
+ K G ++A + M+ G PD +N LI+ L + V EA + E+ G
Sbjct: 436 NGYGKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDILD-ELTRRGF 494
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
+PD TF +I FS+ G+ E+AF + M++ H +P+V T LL +T C+
Sbjct: 495 SPDVVTFTNIIGGFSNKGNFEEAFLLFFYMSE-HHLEPDVVTCSALLNGYCRT----RCM 549
Query: 435 SQ---LLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
++ L M++ L D+ Y +IHG C + A L MI H I P T
Sbjct: 550 AEANVLFHKMLDA-GLKADVILYNSLIHGFCSLGNIDDACHLVSMMIEHGIMPNNIT 605
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 111/490 (22%), Positives = 195/490 (39%), Gaps = 95/490 (19%)
Query: 96 IQPSHYLVNKLIHR-FKDDWKSALGI--FRWAGSCPGYEHSSEIYEMMVDIL--GKV--R 148
I S + V K+++ F++ +AL + FRW+ C G +H+ E M+ IL G + +
Sbjct: 56 IDLSQFNVMKILNDLFEESTDAALALYFFRWSEYCMGSKHTVESVCTMIHILVSGNMNHK 115
Query: 149 QMDQMRALLEEMSK---GHIVTL-----NTIAKVMRRFSGA--------GQWEDAVRTFD 192
MD + L+ S H + L +T +V+ G + A++
Sbjct: 116 AMDLLLHLISYNSGEEGWHNIFLKIHETHTKRRVLETVYGMLVNCYVKENMTQVALKLIC 175
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKIN 251
++ + N LL L + ++ LA E+KS + NA ++FI G+C
Sbjct: 176 KMRHLNIFPLIGVCNSLLKALLESEQLNLAWDFLKEMKSQGLGLNASIISLFISGYCSQG 235
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQY------------------------- 286
+D + EMK G P V++Y+ +I S C+
Sbjct: 236 NIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSLLKEATSILFKMTQMGVFLDSVSVS 295
Query: 287 -------NFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSG------------------ 321
K E +D ++ PN+ + + +S L G
Sbjct: 296 SVVDGYCKVGKSEEAMDVLEVFNLSPNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLI 355
Query: 322 -----------------DFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
D A++ KM G +P + LI + + ++ A Y+
Sbjct: 356 PDCFSYTTMMAGYCKVKDISNALKYLGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAEYL 415
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
+Q M G+ PD ++NT++ + GH +KAF +L M + P++ T++ L+
Sbjct: 416 FQ-RMITEGLVPDVVSYNTLMNGYGKKGHLQKAFELLSMM-RSAGVSPDLVTYNILIHGL 473
Query: 425 FKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
K G +E +LD++ + S D+ T+T +I G E A+LLF M H + P
Sbjct: 474 IKRGLVNEA-KDILDELT-RRGFSPDVVTFTNIIGGFSNKGNFEEAFLLFFYMSEHHLEP 531
Query: 485 RYQTCRLILD 494
TC +L+
Sbjct: 532 DVVTCSALLN 541
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 100/407 (24%), Positives = 192/407 (47%), Gaps = 24/407 (5%)
Query: 128 PGYEHSSEIYEMMVDILGKV-RQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAG---- 182
P ++H+S M+ IL + R D LL + + + L + + FS G
Sbjct: 107 PNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDS 166
Query: 183 -------------QWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL 229
+ +A F L + G + + N L+ +L + G VELA V+ E+
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226
Query: 230 -KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
+S + N +T NI ++ CK ++++ + +++ G +P +++Y+T+I +Y +
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLM 286
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
+ +EL++ M +G P V TY TV++ L K G +E A + +M G PDS + L
Sbjct: 287 EEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL 346
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
+ + V E V+ +M V PD F++M+++F+ G+ +KA + +
Sbjct: 347 LMEACKKGDVVETEKVFS-DMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 405
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
NV + L++ + G ++ L ++M+ + ++D+ TY ++HGLC+
Sbjct: 406 LIPDNV-IYTILIQGYCRKGMISVAMN-LRNEML-QQGCAMDVVTYNTILHGLCKRKMLG 462
Query: 469 WAYLLFKEMIGHDITPRYQTCRLILD-EVKQKHMYDAAEKIEAVMKK 514
A LF EM + P T +++D K ++ +A E + + +K
Sbjct: 463 EADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEK 509
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 123/535 (22%), Positives = 213/535 (39%), Gaps = 121/535 (22%)
Query: 82 EVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDW-KSALGIFRWAGSCPGYEHSSEIYEMM 140
E F L+ +I + L+ L+ + W + A G+++ S G + +M
Sbjct: 186 EAFTLLRSKGFTVSIDACNALIGSLV---RIGWVELAWGVYQEI-SRSGVGINVYTLNIM 241
Query: 141 VDILGKVRQMDQMRALLEEMS-KG---HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGT 196
V+ L K +M+++ L ++ KG IVT NT+ + +S G E+A + +
Sbjct: 242 VNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTL---ISAYSSKGLMEEAFELMNAMPG 298
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDE 255
G T N +++ LCK GK E A+ VF E L+S + P++ T+ + CK V E
Sbjct: 299 KGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVE 358
Query: 256 AQWTIQEMKGH-----------------------------------GCHPCVISYSTIIQ 280
+ +M+ G P + Y+ +IQ
Sbjct: 359 TEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQ 418
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
YCR+ S L +EM QGC +VVTY T++ L K EA ++ +M P
Sbjct: 419 GYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFP 478
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSH---------- 390
DS LI + +Q A+ ++Q +M E + D T+NT++ F
Sbjct: 479 DSYTLTILIDGHCKLGNLQNAMELFQ-KMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEI 537
Query: 391 -------------------------HGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
GH +AF V +EM ++ KP V + ++K
Sbjct: 538 WADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMIS-KNIKPTVMICNSMIKGYC 596
Query: 426 KTGKTDE----------------CLS--QLLDDMVNKHHLSL-----------------D 450
++G + C+S L+ V + ++S D
Sbjct: 597 RSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPD 656
Query: 451 ITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE-VKQKHMYDA 504
+ TY ++HG CR N+ + A ++ ++MI + P T +++ V Q ++ +A
Sbjct: 657 VFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEA 711
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 160/354 (45%), Gaps = 12/354 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVM-RRFSGAGQWEDAVRTFDELG 195
+ M+ + + +D+ + + ++ N I ++ + + G A+ +E+
Sbjct: 378 FSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEML 437
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
G + T N +L LCK + A +F E+ + + P+++T I I G CK+ +
Sbjct: 438 QQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQ 497
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
A Q+MK V++Y+T++ + + + E+ +M ++ P ++Y+ ++
Sbjct: 498 NAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILV 557
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
+ L G EA R+ ++M KP N +I R+ + + +M G
Sbjct: 558 NALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLE-KMISEGF 616
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH-CKPNVQTFHPLLKSCFKTGKTDEC 433
PD ++NT+I F + KAF ++++M + + P+V T++ +L + + E
Sbjct: 617 VPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEA 676
Query: 434 ---LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
L ++++ VN D +TYT +I+G + A+ + EM+ +P
Sbjct: 677 EVVLRKMIERGVNP-----DRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 115/238 (48%), Gaps = 8/238 (3%)
Query: 144 LGKVRQ-MDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKN 202
LG ++ M+ + + E+ + +VT NT+ + F G + A + ++ + +
Sbjct: 493 LGNLQNAMELFQKMKEKRIRLDVVTYNTL---LDGFGKVGDIDTAKEIWADMVSKEILPT 549
Query: 203 TETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQ 261
+ ++L++ LC +G + A V+ E+ S I P N I G+C+ + + ++
Sbjct: 550 PISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLE 609
Query: 262 EMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ--GCPPNVVTYTTVMSYLAK 319
+M G P ISY+T+I + R+ N SK + L+ +M+ + G P+V TY +++ +
Sbjct: 610 KMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCR 669
Query: 320 SGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
+EA + KM G PD + C+I + EA ++ EM + G +PD
Sbjct: 670 QNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHD-EMLQRGFSPD 726
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 102/213 (47%), Gaps = 6/213 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++D GKV +D + + +M SK + T + + ++ G +A R +DE+
Sbjct: 518 YNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMI 577
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLE--LKSCIPPNAHTFNIFIHGWCKINRV 253
+ ++ N ++ C+ G S FLE + P+ ++N I+G+ + +
Sbjct: 578 SKNIKPTVMICNSMIKGYCRSGNASDGES-FLEKMISEGFVPDCISYNTLIYGFVREENM 636
Query: 254 DEAQWTIQEMKGH--GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
+A +++M+ G P V +Y++I+ +CRQ + +L +M +G P+ TYT
Sbjct: 637 SKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYT 696
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRF 344
+++ + EA RI ++M G PD +F
Sbjct: 697 CMINGFVSQDNLTEAFRIHDEMLQRGFSPDDKF 729
>gi|297835856|ref|XP_002885810.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331650|gb|EFH62069.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 536
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 109/384 (28%), Positives = 180/384 (46%), Gaps = 22/384 (5%)
Query: 131 EHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVR 189
HS Y ++ L K D + E M S G + ++ F+ G+ A
Sbjct: 100 RHSFWTYNLLTRSLCKAGMHDLAGQMFECMKSDGISPNSRLLGFLVSSFAEKGKLHCATA 159
Query: 190 TFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF---LELKSCIPPNAHTFNIFIHG 246
L ++ +E +N LL+TL K +VE A +F L +SC + TFNI I G
Sbjct: 160 LL--LQSYEVEGCCMVVNSLLNTLVKLDRVEDAMKLFEEHLRFQSC--NDTKTFNILIRG 215
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ-AQGCPP 305
C + + ++A + M G GC P +++Y+T+I+ +C+ K E+ D+++ + GC P
Sbjct: 216 LCGVGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSSGCSP 275
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
+VVTYT+++S K+G +EA + + M +G P + FN L+ +A + A +
Sbjct: 276 DVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTAEEI- 334
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
+ +M G PD TF ++I + G + F + EEMN PN T+ L+ +
Sbjct: 335 RGKMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNA-RGMFPNAFTYSILINALC 393
Query: 426 KTG---KTDECLSQLLD-DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHD 481
K K E L QL D++ + + Y VI G C+A K A ++ +EM
Sbjct: 394 KENRLLKARELLGQLASKDIIPQPFM------YNPVIDGFCKAGKVNEAIVIVEEMEKKK 447
Query: 482 ITPRYQTCR-LILDEVKQKHMYDA 504
P T LI+ + M++A
Sbjct: 448 CKPDKITFTILIIGHCMKGRMFEA 471
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 136/288 (47%), Gaps = 11/288 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM--SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
Y ++ K ++ + + +++ S G + T ++ + AG+ ++A D++
Sbjct: 244 YNTLIKGFCKSNELKKANEMFDDVKSSSGCSPDVVTYTSMISGYCKAGKMQEASVLLDDM 303
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS--CIPPNAHTFNIFIHGWCKINR 252
G+ T N+L+D K G++ A + ++ S C P + TF I G+C++ +
Sbjct: 304 LRLGIYPTNVTFNVLVDGYAKAGEMHTAEEIRGKMISFGCFP-DVVTFTSLIDGYCRVGQ 362
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
V++ +EM G P +YS +I + C++ K ELL ++ ++ P Y
Sbjct: 363 VNQGFRLWEEMNARGMFPNAFTYSILINALCKENRLLKARELLGQLASKDIIPQPFMYNP 422
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN 372
V+ K+G EAI I E+M+ KPD F LI R+ EAV ++ +M
Sbjct: 423 VIDGFCKAGKVNEAIVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFH-KMVAI 481
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
G +PD T +++++ G ++A+H +N++ H K + PL
Sbjct: 482 GCSPDKITVSSLLSCLLKAGMAKEAYH----LNQIAH-KGQINDGAPL 524
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 114/240 (47%), Gaps = 7/240 (2%)
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRIT-EK 332
+Y+ + +S C+ ++ + M++ G PN ++S A+ G A + +
Sbjct: 105 TYNLLTRSLCKAGMHDLAGQMFECMKSDGISPNSRLLGFLVSSFAEKGKLHCATALLLQS 164
Query: 333 MKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
++ G N L+ TL + RV++A+ +++ E DT TFN +I G
Sbjct: 165 YEVEGC---CMVVNSLLNTLVKLDRVEDAMKLFE-EHLRFQSCNDTKTFNILIRGLCGVG 220
Query: 393 HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
EKA +L M+ C P++ T++ L+K K+ + + +++ DD+ + S D+
Sbjct: 221 KAEKAVELLGGMSGF-GCLPDIVTYNTLIKGFCKSNELKKA-NEMFDDVKSSSGCSPDVV 278
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
TYT +I G C+A K + A +L +M+ I P T +++D + AE+I M
Sbjct: 279 TYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTAEEIRGKM 338
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 126/312 (40%), Gaps = 41/312 (13%)
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF-SKVYELLDE 297
T+N+ CK D A + MK G P ++ S+ + LL
Sbjct: 105 TYNLLTRSLCKAGMHDLAGQMFECMKSDGISPNSRLLGFLVSSFAEKGKLHCATALLLQS 164
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
+ +GC + ++++ L K E+A+++ E+ S D++ FN LI L +
Sbjct: 165 YEVEGC---CMVVNSLLNTLVKLDRVEDAMKLFEEHLRFQSCNDTKTFNILIRGLCGVGK 221
Query: 358 VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTF 417
++AV + M G PD T+NT+I F +KA + +++ C P+V T+
Sbjct: 222 AEKAVELLG-GMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSSGCSPDVVTY 280
Query: 418 HPLLKSCFKTGKTDECLSQLLDDM------------------------------VNKHHL 447
++ K GK E S LLDDM + +
Sbjct: 281 TSMISGYCKAGKMQEA-SVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTAEEIRGKMI 339
Query: 448 SL----DITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMY 502
S D+ T+T +I G CR + + L++EM + P T ++++ + K+ +
Sbjct: 340 SFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILINALCKENRLL 399
Query: 503 DAAEKIEAVMKK 514
A E + + K
Sbjct: 400 KARELLGQLASK 411
>gi|125582060|gb|EAZ22991.1| hypothetical protein OsJ_06687 [Oryza sativa Japonica Group]
Length = 466
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 160/339 (47%), Gaps = 12/339 (3%)
Query: 170 TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL 229
T A +R F G + AV+ D++ +G + + L++ ++G V+ A + L
Sbjct: 44 TFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDL-LNT 102
Query: 230 KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFS 289
C PN +N + G C R ++ + EM GC P ++S +I S C+
Sbjct: 103 MLC-KPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVD 161
Query: 290 KVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
E+L++M+ GC P+ V Y +++ L++ G ++A+R+ M KPD+ FN ++
Sbjct: 162 SAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPDALGFNAVL 218
Query: 350 YTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH 409
RA R +A + +M + TFN +I M +G A V E+M +
Sbjct: 219 KGFCRAERWHDASELI-AQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRY-R 276
Query: 410 CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEW 469
C P++ T+ LL + G E QL M K DI +Y V+ GLCRA + E
Sbjct: 277 CTPDIVTYSSLLNGFSEQGLV-EVAIQLFRSMPCKP----DIFSYNAVLKGLCRAARWED 331
Query: 470 AYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
A L EM+G D P T ++++ + QK + D A ++
Sbjct: 332 AGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEV 370
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 115/460 (25%), Positives = 207/460 (45%), Gaps = 52/460 (11%)
Query: 33 SHIVSSSPIESYCSDGARLDHHQVLCVDSPR---LPDIDVIISKVHVGSSEDEVFQSLKQ 89
+ + ++ I S+C +G LD L PR PD+ VI S + G SE Q
Sbjct: 41 NEVTFATQIRSFCQNGL-LDRAVQLLDQMPRYGCTPDV-VIYSTLINGFSE--------Q 90
Query: 90 DHVCNAIQPSHYLVNKLIHRFKDD-WKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVR 148
HV A+ L+N ++ + + +AL G C E +I E+M
Sbjct: 91 GHVDQALD----LLNTMLCKPNTVCYNAAL-----KGLCIA-ERWEDIGELMA------- 133
Query: 149 QMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNL 208
E + KG T + ++ + AV +++ +G E +T N+
Sbjct: 134 ---------EMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNI 184
Query: 209 LLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGC 268
++++L + G+V+ A + + P+A FN + G+C+ R +A I +M C
Sbjct: 185 IINSLSERGRVDDALRLLNSM--VCKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDC 242
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
++++ +I C+ + ++ ++M C P++VTY+++++ ++ G E AI+
Sbjct: 243 PLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQ 302
Query: 329 ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF 388
+ M KPD +N ++ L RA+R ++A + EM P+ TFN +I
Sbjct: 303 LFRSMP---CKPDIFSYNAVLKGLCRAARWEDAGELI-AEMVGKDCPPNEVTFNILINSL 358
Query: 389 SHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
G ++A VLE+M P++ T++ L+ + G+ D+ L +LL M K
Sbjct: 359 CQKGLVDRAIEVLEQMPNYGS-TPDIFTYNALINGFSEQGRLDDAL-KLLSTMSCKP--- 413
Query: 449 LDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
D +Y + GLCRA + + A L EM+ + TP T
Sbjct: 414 -DAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVT 452
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 144/282 (51%), Gaps = 10/282 (3%)
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
+ P+ +T+N + G C + +EA+ + EM + C P ++++T I+S+C+ +
Sbjct: 3 VAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAV 62
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
+LLD+M GC P+VV Y+T+++ ++ G ++A+ + M KP++ +N + L
Sbjct: 63 QLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTML---CKPNTVCYNAALKGL 119
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
A R E + EM G +P+ +TF+ +I+ + + A VLE+M K C+P
Sbjct: 120 CIAER-WEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKY-GCEP 177
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
+ ++ ++ S + G+ D+ L +LL+ MV K D + V+ G CRA + A
Sbjct: 178 DTVNYNIIINSLSERGRVDDAL-RLLNSMVCKP----DALGFNAVLKGFCRAERWHDASE 232
Query: 473 LFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
L +M D T +++D + Q + + A ++ M +
Sbjct: 233 LIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPR 274
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 135/292 (46%), Gaps = 15/292 (5%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G E + Y ++++ L + ++D LL M K + N V++ F A +W DA
Sbjct: 174 GCEPDTVNYNIIINSLSERGRVDDALRLLNSMVCKPDALGFNA---VLKGFCRAERWHDA 230
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS--CIPPNAHTFNIFIH 245
++ T N+L+D LC+ G V A VF ++ C P + T++ ++
Sbjct: 231 SELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTP-DIVTYSSLLN 289
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G+ + V+ A IQ + C P + SY+ +++ CR + EL+ EM + CPP
Sbjct: 290 GFSEQGLVEVA---IQLFRSMPCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPP 346
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N VT+ +++ L + G + AI + E+M GS PD +N LI R+ +A+ +
Sbjct: 347 NEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKL- 405
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTF 417
+ PD ++N+ + + A ++ EM + C PN TF
Sbjct: 406 ---LSTMSCKPDAISYNSTLKGLCRAERWQDAEELVAEMLR-NKCTPNEVTF 453
>gi|302785283|ref|XP_002974413.1| hypothetical protein SELMODRAFT_174049 [Selaginella moellendorffii]
gi|300158011|gb|EFJ24635.1| hypothetical protein SELMODRAFT_174049 [Selaginella moellendorffii]
Length = 447
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 160/337 (47%), Gaps = 10/337 (2%)
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCI 233
+M+ F AG+++ A+ DE+ + G+ N ++ LC GKV A F +
Sbjct: 36 LMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQALLHFRRIGEDC 95
Query: 234 PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
PN +T++I + CK + EA + EM GC P V++Y+ +I + + +V
Sbjct: 96 APNVYTYSILVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLERLDEVLM 155
Query: 294 LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLG 353
LL EM +GC +V+TYT ++ K+ +EA R+ ++ K + +N L L
Sbjct: 156 LLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALE----KRNVVTYNSLFTALS 211
Query: 354 RA--SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCK 411
A R EA+ + + +M + G P+ + T++ M + ++A+ VL M + CK
Sbjct: 212 TAEGDRTTEALSLLE-KMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYS-QGCK 269
Query: 412 PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAY 471
+ ++ L+ + G+T + L +LL M+ ++ LD T +VIH C+A A+
Sbjct: 270 TDDVSYKILVVAFASAGRTYDSL-ELLGRMLGSGYI-LDTKTMNVVIHKFCKAGDLHEAH 327
Query: 472 LLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
LFK M P T ++ + D A K+
Sbjct: 328 QLFKSMCQRGSIPSNVTYNTLIGAFCKAQQPDTAVKL 364
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 179/382 (46%), Gaps = 17/382 (4%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTI--AKVMRRFSGAGQWEDAVRTFDEL 194
Y +++ K + Q LL+EM K + V N + ++R AG+ A+ F +
Sbjct: 33 YGILMQGFCKAGEFQQALELLDEM-KSNGVRPNVVIHTTIIRGLCTAGKVSQALLHFRRI 91
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINR 252
G N T ++L+D LCK G+ A + E+ K C PN T+N I G+ K+ R
Sbjct: 92 GE-DCAPNVYTYSILVDALCKSGQPHEAYGLVTEMVKKGC-SPNVVTYNALIDGFRKLER 149
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
+DE ++EM GC VI+Y+ I+ +C+ + + Y LL+ ++ + NVVTY +
Sbjct: 150 LDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEKR----NVVTYNS 205
Query: 313 VMSYLAKS-GD-FEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
+ + L+ + GD EA+ + EKM G++P+ + ++ L + SR+ EA Y + M
Sbjct: 206 LFTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEA-YQVLLSMY 264
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKT 430
G D ++ ++ F+ G + +L M + + +T + ++ K G
Sbjct: 265 SQGCKTDDVSYKILVVAFASAGRTYDSLELLGRMLGSGYI-LDTKTMNVVIHKFCKAGDL 323
Query: 431 DECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCR 490
E QL M + + ++T Y +I C+A + + A L +MI D P T
Sbjct: 324 HEA-HQLFKSMCQRGSIPSNVT-YNTLIGAFCKAQQPDTAVKLLHQMIQADFKPNVITYN 381
Query: 491 LILDEVKQKHMYDAAEKIEAVM 512
I+ ++ + A I +M
Sbjct: 382 SIIKSFCREQREEEARGIFQMM 403
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 120/246 (48%), Gaps = 15/246 (6%)
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
N ++ I + G+CK +A + EMK +G P V+ ++TII+ C KV + L
Sbjct: 29 NEVSYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLC---TAGKVSQAL 85
Query: 296 DEMQAQG--CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLG 353
+ G C PNV TY+ ++ L KSG EA + +M G P+ +N LI
Sbjct: 86 LHFRRIGEDCAPNVYTYSILVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFR 145
Query: 354 RASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPN 413
+ R+ E + + + EM + G D T+ ++ +F + ++A+ +L N LE K N
Sbjct: 146 KLERLDEVLMLLK-EMSQRGCRADVITYTMILDIFCKNNSIDEAYRLL---NALE--KRN 199
Query: 414 VQTFHPLLK--SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAY 471
V T++ L S + +T E LS LL+ M+ + + Y V+ LC+ ++ + AY
Sbjct: 200 VVTYNSLFTALSTAEGDRTTEALS-LLEKMIQEGTRPNQV-NYRTVLLMLCKNSRLDEAY 257
Query: 472 LLFKEM 477
+ M
Sbjct: 258 QVLLSM 263
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 118/250 (47%), Gaps = 5/250 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGT 196
Y M++DI K +D+ LL + K ++VT N++ + G + +A+ +++
Sbjct: 172 YTMILDIFCKNNSIDEAYRLLNALEKRNVVTYNSLFTALSTAEG-DRTTEALSLLEKMIQ 230
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS--CIPPNAHTFNIFIHGWCKINRVD 254
G N +L LCK +++ A V L + S C + ++ I + + R
Sbjct: 231 EGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQGCKTDDV-SYKILVVAFASAGRTY 289
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
++ + M G G + + +I +C+ + + ++L M +G P+ VTY T++
Sbjct: 290 DSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEAHQLFKSMCQRGSIPSNVTYNTLI 349
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
K+ + A+++ +M KP+ +N +I + R R +EA ++Q+ M ++G
Sbjct: 350 GAFCKAQQPDTAVKLLHQMIQADFKPNVITYNSIIKSFCREQREEEARGIFQM-MVDSGC 408
Query: 375 APDTSTFNTM 384
PD ++ T+
Sbjct: 409 FPDRVSYTTL 418
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 112/230 (48%), Gaps = 22/230 (9%)
Query: 273 ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI----R 328
+SY ++Q +C+ F + ELLDEM++ G PNVV +TT++ L +G +A+ R
Sbjct: 31 VSYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQALLHFRR 90
Query: 329 ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF 388
I E P+ ++ L+ L ++ + EA Y EM + G +P+ T+N +I F
Sbjct: 91 IGED-----CAPNVYTYSILVDALCKSGQPHEA-YGLVTEMVKKGCSPNVVTYNALIDGF 144
Query: 389 SHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
++ +L+EM++ C+ +V T+ +L K DE +LL+ + +
Sbjct: 145 RKLERLDEVLMLLKEMSQ-RGCRADVITYTMILDIFCKNNSIDEAY-RLLNALEKR---- 198
Query: 449 LDITTYTLVIHGLCRA--NKCEWAYLLFKEMIGHDITP---RYQTCRLIL 493
++ TY + L A ++ A L ++MI P Y+T L+L
Sbjct: 199 -NVVTYNSLFTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLML 247
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 75/170 (44%), Gaps = 5/170 (2%)
Query: 345 FNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
+ L+ +A Q+A+ + EM NGV P+ T+I G +A +
Sbjct: 33 YGILMQGFCKAGEFQQALELLD-EMKSNGVRPNVVIHTTIIRGLCTAGKVSQALLHFRRI 91
Query: 405 NKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRA 464
E C PNV T+ L+ + K+G+ E L+ +MV K S ++ TY +I G +
Sbjct: 92 G--EDCAPNVYTYSILVDALCKSGQPHEAYG-LVTEMVKKG-CSPNVVTYNALIDGFRKL 147
Query: 465 NKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
+ + +L KEM T +ILD + + D A ++ ++K
Sbjct: 148 ERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEK 197
>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
Length = 1078
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 184/393 (46%), Gaps = 20/393 (5%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS 161
L +++ F+ + AL +FRWA S PG+ S ++ +++IL + M ++E +
Sbjct: 83 LFVRVLSSFRTSPRMALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVI 142
Query: 162 KGHI---------------VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETM 206
++ V++ + ++ +S E + FD++ L + +
Sbjct: 143 NANMHRIVDVLIGGCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNC 202
Query: 207 NLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKG 265
N +L L + + A V+ + I P T+N + +CK +V + + EM+
Sbjct: 203 NRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQR 262
Query: 266 HGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEE 325
GC P ++Y+ +I ++ F + L+ EM G + TY ++ G E
Sbjct: 263 RGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAE 322
Query: 326 AIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMI 385
A+ + E+M + G+ P +N IY L + R+ +A+ +M N + PD ++NT+I
Sbjct: 323 ALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLS-DMLANNLLPDVVSYNTLI 381
Query: 386 TMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKH 445
+ G+ KAF + +E+ + + P + T++ LL + G+ E QL +M+N+
Sbjct: 382 YGYCRLGNLMKAFLLFDELRSI-YLFPTIVTYNTLLDGLCRQGEL-EVAQQLKVEMINE- 438
Query: 446 HLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
++ DI TYT++++G C+ A F EM+
Sbjct: 439 GIAPDIVTYTILVNGSCKMGSLSMAQEFFDEML 471
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 125/460 (27%), Positives = 211/460 (45%), Gaps = 29/460 (6%)
Query: 41 IESYCSDGARLDHHQVLCVDSPR--LPDIDVIISKVHVGSSEDEVFQSLKQ---DHVCNA 95
++SYC G +L R P+ DV + + G S+ F+ K + +
Sbjct: 241 LDSYCKGGKVQQGLDLLSEMQRRGCAPN-DVTYNVLINGLSKKGEFEQAKGLIGEMLKTG 299
Query: 96 IQPSHYLVNKLIHRF--KDDWKSALGI---FRWAGSCPGYE-HSSEIYEMMVDILGKVRQ 149
++ S Y N LI+ + K AL + G+ P ++S IY + LG++
Sbjct: 300 LKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCK--LGRMSD 357
Query: 150 -MDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNL 208
M Q+ +L +V+ NT+ R G A FDEL + L T N
Sbjct: 358 AMQQLSDMLANNLLPDVVSYNTLIYGYCRL---GNLMKAFLLFDELRSIYLFPTIVTYNT 414
Query: 209 LLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG 267
LLD LC++G++E+A+ + +E+ I P+ T+ I ++G CK+ + AQ EM G
Sbjct: 415 LLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEG 474
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
+Y+T I + + S+ + L +EM A+G PP+++ Y V+ L K G+ EEA
Sbjct: 475 LELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEAS 534
Query: 328 RITEKMKIVGSKPDSRFFNCLIYT---LGRASRVQEAVYVYQVEMPENGVAPDTSTFNTM 384
+ +KM G PD + +I+ GR + +E Y EM G+ P T+ +
Sbjct: 535 ELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFY----EMLSKGLTPSVVTYTVL 590
Query: 385 ITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNK 444
I + G E+AF EM + + PNV T++ L+ K + D+ + +MV K
Sbjct: 591 IHGHAGKGRLERAFIYFSEMQE-KGILPNVITYNSLINGLCKVRRMDQAYN-FFAEMVEK 648
Query: 445 HHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
+ +YT++I+ C + A L+K+M+ + P
Sbjct: 649 GIFP-NKYSYTILINENCNMGNWQEALSLYKQMLDRGVQP 687
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 184/396 (46%), Gaps = 21/396 (5%)
Query: 107 IHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK---- 162
I R KD A+ ++R G G + + Y ++D K ++ Q LL EM +
Sbjct: 208 ILRDKDLMSKAVEVYRTMGEF-GIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCA 266
Query: 163 GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELA 222
+ VT N + + S G++E A E+ GL+ + T N L+ +G + A
Sbjct: 267 PNDVTYNVL---INGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEA 323
Query: 223 RSVFLE--LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQ 280
S+ E LK P T+N FI+G CK+ R+ +A + +M + P V+SY+T+I
Sbjct: 324 LSLQEEMVLKGA-SPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIY 382
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
YCR N K + L DE+++ P +VTY T++ L + G+ E A ++ +M G P
Sbjct: 383 GYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAP 442
Query: 341 DSRFFNCLIY---TLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKA 397
D + L+ +G S QE + EM G+ D+ + T I G +A
Sbjct: 443 DIVTYTILVNGSCKMGSLSMAQE----FFDEMLHEGLELDSYAYATRIVGELKLGDTSRA 498
Query: 398 FHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLV 457
F + EEM + P++ ++ ++ K G +E S+LL MV+ + D TYT +
Sbjct: 499 FSLQEEM-LAKGFPPDLIIYNVVVDGLCKLGNLEEA-SELLQKMVSDGVIP-DYVTYTSI 555
Query: 458 IHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
IH + +F EM+ +TP T +++
Sbjct: 556 IHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLI 591
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 133/298 (44%), Gaps = 41/298 (13%)
Query: 165 IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARS 224
IVT NT+ + R G+ E A + E+ G+ + T +L++ CK G + +A+
Sbjct: 409 IVTYNTLLDGLCR---QGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQE 465
Query: 225 VF-------LELKS-----------------------------CIPPNAHTFNIFIHGWC 248
F LEL S PP+ +N+ + G C
Sbjct: 466 FFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLC 525
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
K+ ++EA +Q+M G P ++Y++II ++ K E+ EM ++G P+VV
Sbjct: 526 KLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVV 585
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
TYT ++ A G E A +M+ G P+ +N LI L + R+ +A Y + E
Sbjct: 586 TYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQA-YNFFAE 644
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
M E G+ P+ ++ +I + G+ ++A + ++M +P+ T LLK K
Sbjct: 645 MVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLD-RGVQPDSCTHSALLKQLGK 701
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 126/269 (46%), Gaps = 11/269 (4%)
Query: 137 YEMMVDILGKVRQMDQMRA--LLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDE 193
Y I+G+++ D RA L EEM +KG L V+ G E+A +
Sbjct: 480 YAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQK 539
Query: 194 LGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINR 252
+ + G+ + T ++ + G++ R +F E+ S + P+ T+ + IHG R
Sbjct: 540 MVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGR 599
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
++ A EM+ G P VI+Y+++I C+ + Y EM +G PN +YT
Sbjct: 600 LERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTI 659
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ-----EAVYVYQV 367
+++ G+++EA+ + ++M G +PDS + L+ LG+ ++Q + +V
Sbjct: 660 LINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQAVHGTSTMPTAKV 719
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEK 396
++ V T+ T ++ + +GH K
Sbjct: 720 DLLSQTVGAATAL--TSVSSIAENGHITK 746
>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
Length = 825
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/410 (23%), Positives = 188/410 (45%), Gaps = 42/410 (10%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLN-TIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +++ L K ++MD+ +L +M + N T ++ +S +G W+++VR F E+
Sbjct: 262 YSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMS 321
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIP------------------- 234
+ L + N + LCK G+++ AR +F + LK P
Sbjct: 322 SSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIA 381
Query: 235 ---------------PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
P+ H FN I+ + ++ +D++ ++M G +P +I++ST+I
Sbjct: 382 GMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVI 441
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
++CR E + M G PP+ Y+ ++ D +A + M G
Sbjct: 442 SAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIP 501
Query: 340 PDS-RFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
P +FF +I L + RV E V + + G P+ TFN+++ + G+ ++A
Sbjct: 502 PPCIKFFTSIINNLCKEGRVAEGKDVVDLII-HTGQRPNLITFNSLVDGYCLVGNMKEAV 560
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
+L+ M + +P++ T++ L+ K G+ D+ L+ L DM++K ++L +Y +++
Sbjct: 561 GLLDSMESV-GVEPDIYTYNTLVDGYCKHGRIDDALT-LFRDMLHK-RVTLTSVSYNIIL 617
Query: 459 HGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
HGL +A + A +F EMI + T +L + + + D A +
Sbjct: 618 HGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANML 667
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 154/321 (47%), Gaps = 8/321 (2%)
Query: 165 IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARS 224
I T N + RR A + + + F L GL + + N L+D KEG+V+ A
Sbjct: 189 IYTYNILINCYRR---ARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHD 245
Query: 225 VFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYC 283
+F ++ + I PN T++ I+G CK +D+A+ +++M G G P ++Y+ +I Y
Sbjct: 246 LFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYS 305
Query: 284 RQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSR 343
+ + + EM + P+V + M+ L K G +EA I + M + G KPD
Sbjct: 306 TSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVI 365
Query: 344 FFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEE 403
+ L++ A + ++ V + E GV PD FNT+I ++ G +K+ + E+
Sbjct: 366 SYGALLHGYATAGCIAGMDNLFNVMVCE-GVVPDRHVFNTLINAYARLGMMDKSLLMFED 424
Query: 404 MNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCR 463
M K + P++ TF ++ + + G+ D+ + + + M++ + D Y+ +I G C
Sbjct: 425 MTK-QGVNPDIITFSTVISAFCRLGRLDDAMEK-FNHMIDT-GVPPDTAVYSCLIQGQCN 481
Query: 464 ANKCEWAYLLFKEMIGHDITP 484
A L +M+ I P
Sbjct: 482 RRDLVKAKELISDMLSKGIPP 502
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 178/373 (47%), Gaps = 11/373 (2%)
Query: 127 CPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWE 185
C G ++ +++ ++ MD+ + E+M+K G + T + V+ F G+ +
Sbjct: 392 CEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLD 451
Query: 186 DAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIF 243
DA+ F+ + G+ +T + L+ C + A+ + ++ K PP F
Sbjct: 452 DAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSI 511
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
I+ CK RV E + + + G P +I++++++ YC N + LLD M++ G
Sbjct: 512 INNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGV 571
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
P++ TY T++ K G ++A+ + M S +N +++ L +A R A
Sbjct: 572 EPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKE 631
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
++ EM E+G+A T+ T++ + ++A +LE++ + + K ++ TF+ ++++
Sbjct: 632 MFH-EMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSM-NVKFDILTFNIVIRA 689
Query: 424 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
FK G+ E ++ L ++ + L I TY ++I L + E A LF M T
Sbjct: 690 MFKVGRRQE--AKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCT 747
Query: 484 PRYQTCRLILDEV 496
P + IL+E+
Sbjct: 748 PDSR----ILNEI 756
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 171/391 (43%), Gaps = 60/391 (15%)
Query: 176 RRFSGAGQWEDAVRTFDELGTFGLEKNTET----MNLLLDTLCKEGKVELARSV------ 225
R SG +DA FDEL L ++ +N LL L + R V
Sbjct: 116 RLRSGTLGPDDARHLFDELL---LRRDAPAPARGLNELLSALARAPPSAACRDVPALAVE 172
Query: 226 -FLELKSCIPPNA----HTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQ 280
F + C P A +T+NI I+ + + R D + G P V SY+ +I
Sbjct: 173 LFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALID 232
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
+ ++ K ++L +M+ QG PNVVTY+++++ L K+ + ++A R+ +M G +P
Sbjct: 233 GFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRP 292
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
++ +NCLI+ + +E+V V++ EM + + PD N+ +T HG ++A +
Sbjct: 293 NNMTYNCLIHGYSTSGMWKESVRVFK-EMSSSLLVPDVGNCNSFMTALCKHGRIKEARDI 351
Query: 401 LEEMNKLEHCKPNV-----------------------------------QTFHPLLKSCF 425
+ M L+ KP+V F+ L+ +
Sbjct: 352 FDSM-VLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYA 410
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
+ G D+ L + +DM K ++ DI T++ VI CR + + A F MI + P
Sbjct: 411 RLGMMDKSL-LMFEDM-TKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPD 468
Query: 486 YQ--TCRLILDEVKQKHMYDAAEKIEAVMKK 514
+C LI + ++ + A E I ++ K
Sbjct: 469 TAVYSC-LIQGQCNRRDLVKAKELISDMLSK 498
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 123/278 (44%), Gaps = 40/278 (14%)
Query: 162 KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVEL 221
+ +++T N++ + G ++AV D + + G+E + T N L+D CK G+++
Sbjct: 537 RPNLITFNSLVD---GYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDD 593
Query: 222 ARSVFLEL------------------------------------KSCIPPNAHTFNIFIH 245
A ++F ++ +S + + HT+ +
Sbjct: 594 ALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLG 653
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G C+ N DEA ++++ +++++ +I++ + + EL + G P
Sbjct: 654 GLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVP 713
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
++TY +++ L K FE+A + M+ PDSR N +I L V +A Y
Sbjct: 714 TILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGN-Y 772
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEE 403
++ + G+ P+ +T + +I +FS +G + + +L E
Sbjct: 773 LSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLLPE 810
>gi|356509602|ref|XP_003523536.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Glycine max]
Length = 598
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 193/405 (47%), Gaps = 22/405 (5%)
Query: 120 IFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI----VTLNTIAKVM 175
++ W C G + + +V V ++D R LL ++ ++ V N + V+
Sbjct: 93 VYDWM-RCDGQIPDNRLLGFLVWSYAIVGRLDVSRELLADVQCNNVGVNAVVYNDLFNVL 151
Query: 176 RRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS--CI 233
R + DAV F EL + T T+N+L+ LC+ G+++ A + +L+S C+
Sbjct: 152 IR---QNKVVDAVVLFRELIRLRYKPVTYTVNILMRGLCRAGEIDEAFRLLNDLRSFGCL 208
Query: 234 PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG-CHPCVISYSTIIQSYCRQYNFSKVY 292
P + T+N IHG C+IN VD A+ ++E+ +G P V+SY+TII YC+ FSK+
Sbjct: 209 P-DVITYNTLIHGLCRINEVDRARSLLKEVCLNGEFAPDVVSYTTIISGYCK---FSKME 264
Query: 293 E---LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
E L EM G PN T+ ++ K GD A+ + EKM + G PD F LI
Sbjct: 265 EGNLLFGEMIRSGTAPNTFTFNALIGGFGKLGDMASALALYEKMLVQGCVPDVATFTSLI 324
Query: 350 YTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH 409
R +V +A+ ++ +M + + TF+ +++ ++ KA +L +N+
Sbjct: 325 NGYFRLGQVHQAMDMWH-KMNDKNIGATLYTFSVLVSGLCNNNRLHKARDILRLLNE-SD 382
Query: 410 CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEW 469
P ++P++ K+G DE + + VN+ D T+T++I G C +
Sbjct: 383 IVPQPFIYNPVIDGYCKSGNVDEANKIVAEMEVNR--CKPDKLTFTILIIGHCMKGRMPE 440
Query: 470 AYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
A +F +M+ P T + + + M A +++ V+ +
Sbjct: 441 AIGIFHKMLAVGCAPDEITVNNLRSCLLKAGMPGEAARVKKVLAQ 485
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 4/170 (2%)
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
+TY+ ++ L +S A + + M+ G PD+R L+++ R+ + +
Sbjct: 72 LTYSLLLRSLCRSNLHHTAKVVYDWMRCDGQIPDNRLLGFLVWSYAIVGRLDVSRELLA- 130
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKT 427
++ N V + +N + + A + E+ +L + KP T + L++ +
Sbjct: 131 DVQCNNVGVNAVVYNDLFNVLIRQNKVVDAVVLFRELIRLRY-KPVTYTVNILMRGLCRA 189
Query: 428 GKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
G+ DE +LL+D+ + L D+ TY +IHGLCR N+ + A L KE+
Sbjct: 190 GEIDEAF-RLLNDLRSFGCLP-DVITYNTLIHGLCRINEVDRARSLLKEV 237
>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
Length = 479
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 104/412 (25%), Positives = 184/412 (44%), Gaps = 47/412 (11%)
Query: 140 MVDILGKVRQMDQM----RALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
++D+L + R+ +Q+ R + + K + ++ + K + R G+ + A T E+
Sbjct: 6 LLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCR---TGKIDKACSTIAEMA 62
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDE 255
L + T N+++DTLCK ++ A F + P+ T+N + G CK RV +
Sbjct: 63 REKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPE---PDVVTYNTLLGGLCKNGRVAQ 119
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
A M+G G P ++Y+T+I +C+ F Y LL M ++ C P V +Y ++++
Sbjct: 120 ACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIIN 179
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
L K+ ++A ++ E+MK+ G KPD +N LI+ L R+ EA + V M ENG
Sbjct: 180 GLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTV-MVENGFQ 238
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQT------------------- 416
PD TF +I ++AF + + M K + C P++ T
Sbjct: 239 PDKITFTALIEGLCTTDRIKEAFVLFQGMAK-QGCAPDLVTHTVLVSKLCILRKLRPALS 297
Query: 417 --------------FHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC 462
+ P+ + + D ++LL M + + ++ TYT GL
Sbjct: 298 VVRNYPACPEAVILYTPIFRELGRRRGFDRA-ARLLQKMA-RRGVPPNVVTYTAFFKGLG 355
Query: 463 RANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
+ AY F+ M+ I P +++D + D AEK+ M +
Sbjct: 356 DWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQ 407
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 160/366 (43%), Gaps = 59/366 (16%)
Query: 116 SALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKV 174
S G AG P S Y ++D+ K+ Q + LL+ M S+ T+ + +
Sbjct: 122 SLFGSMEGAGITP----SDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSI 177
Query: 175 MRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCI 233
+ + + A + F+E+ G + + T N L+ LC + ++ A+ + + +++
Sbjct: 178 INGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGF 237
Query: 234 PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYC---------- 283
P+ TF I G C +R+ EA Q M GC P +++++ ++ C
Sbjct: 238 QPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALS 297
Query: 284 -----------------------RQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKS 320
R+ F + LL +M +G PPNVVTYT ++
Sbjct: 298 VVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYT---AFFKGL 354
Query: 321 GDFEEAIRITEKMKIV---GSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPD 377
GD++E +R + + + G +PD +N L+ +A R+ A + + M ++G+ P+
Sbjct: 355 GDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRY-MDQSGLPPN 413
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHC------KPNVQTFHPLLKSCFKTGKTD 431
T+NT++ GHH + V E + +L H +P+V T+ L+ F G+ D
Sbjct: 414 IVTYNTLV------GHHCRKGKV-EAIGELLHTMVSRGRQPDVATWSTLVAGLFMVGQAD 466
Query: 432 ECLSQL 437
S L
Sbjct: 467 AAYSFL 472
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 132/282 (46%), Gaps = 11/282 (3%)
Query: 205 TMNLLLDTLCKEGKVELARSVFLELKS--CIPPNAHTFNIFIHGWCKINRVDEAQWTIQE 262
T N LLD L + + E VF + S C PNA ++ + C+ ++D+A TI E
Sbjct: 2 TCNALLDLLERARRSEQIVVVFRRIFSQDC-KPNALSYCYLVKALCRTGKIDKACSTIAE 60
Query: 263 MKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGD 322
M P V +Y+ +I + C+ S+ E + M P+VVTY T++ L K+G
Sbjct: 61 MAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPE----PDVVTYNTLLGGLCKNGR 116
Query: 323 FEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFN 382
+A + M+ G P + LI + + + A + Q+ M +P ++
Sbjct: 117 VAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQL-MASRKCSPTVYSYC 175
Query: 383 TMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMV 442
++I + ++A+ + EEM KL CKP+ T++ L+ + E LL MV
Sbjct: 176 SIINGLCKNRKVDQAYQLFEEM-KLAGCKPDRVTYNTLIHGLCVKQRLHEA-KDLLTVMV 233
Query: 443 NKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
++ D T+T +I GLC ++ + A++LF+ M P
Sbjct: 234 -ENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAP 274
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 101/228 (44%), Gaps = 19/228 (8%)
Query: 83 VFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVD 142
+FQ + + + LV+KL K + AL + R +CP + +Y +
Sbjct: 263 LFQGMAKQGCAPDLVTHTVLVSKLCILRK--LRPALSVVRNYPACP---EAVILYTPIFR 317
Query: 143 ILGKVRQMDQMRALLEEMSK----GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTF- 197
LG+ R D+ LL++M++ ++VT F G G W++ +R + E
Sbjct: 318 ELGRRRGFDRAARLLQKMARRGVPPNVVTYTAF------FKGLGDWKEGMRAYREFRRML 371
Query: 198 --GLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
G+E + N+L+D CK ++++A + + +S +PPN T+N + C+ +V+
Sbjct: 372 EQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVE 431
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
+ M G P V ++ST++ Y L+ +QG
Sbjct: 432 AIGELLHTMVSRGRQPDVATWSTLVAGLFMVGQADAAYSFLNLAMSQG 479
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 58/140 (41%)
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
+PPN T+ F G A + M G P +++Y+ ++ +C+
Sbjct: 340 VPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAE 399
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
+++ M G PPN+VTY T++ + + G E + M G +PD ++ L+ L
Sbjct: 400 KMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGL 459
Query: 353 GRASRVQEAVYVYQVEMPEN 372
+ A + M +
Sbjct: 460 FMVGQADAAYSFLNLAMSQG 479
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 84/203 (41%), Gaps = 9/203 (4%)
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
VT ++ L ++ E+ + + ++ KP++ + L+ L R ++ +A
Sbjct: 1 VTCNALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTI-A 59
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKT 427
EM + PD T+N +I +A E M + P+V T++ LL K
Sbjct: 60 EMAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPE-----PDVVTYNTLLGGLCKN 114
Query: 428 GKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR-Y 486
G+ + S L M D+T YT +I C+ + E AY L + M +P Y
Sbjct: 115 GRVAQACS-LFGSMEGAGITPSDVT-YTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVY 172
Query: 487 QTCRLILDEVKQKHMYDAAEKIE 509
C +I K + + A + E
Sbjct: 173 SYCSIINGLCKNRKVDQAYQLFE 195
>gi|317106735|dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
Length = 826
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 194/404 (48%), Gaps = 15/404 (3%)
Query: 113 DWKSALGIFRWAGSCPGYEHSSEIY--EMMVDILGKVRQMDQMRALLEEM-SKGHIVTLN 169
D + L F WA +S + + ++ +L + R ++ LLE M SK I T
Sbjct: 73 DPRLGLNFFEWASKQSTLSNSLDGFVCSSLLKLLARFRVFKEIENLLETMKSKELIPTCE 132
Query: 170 TIAKVMRRFSGAGQWEDAVRTFDE-LGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE 228
++ V+ ++G+G ++A+ ++ + + N LL+ L GKVE+AR V+ E
Sbjct: 133 ALSFVISAYAGSGLVKEALELYNTVIDVHNCVPDVFACNSLLNLLVHHGKVEIARKVYDE 192
Query: 229 LKSCIPPNA----HTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCR 284
+ + N +T I G CK +V+E + I++ G GC P ++ Y+T+I YC+
Sbjct: 193 M---VDRNGDVDNYTVCIVTKGLCKEGKVEEGRHLIEKRWGKGCVPNIVFYNTLIDGYCK 249
Query: 285 QYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRF 344
+ + L E++ +G P V TY +++ K G FE ++ +MK G +
Sbjct: 250 NGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQI 309
Query: 345 FNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
FN +I + EA + M E+G PD +T+NT+I G +A +LE
Sbjct: 310 FNGIIDARFKHGCEIEAADAVRW-MIESGCEPDMATYNTLINGSCSKGKVREAEELLEHA 368
Query: 405 NKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRA 464
+ PN ++ PL+ + K G+ S+LL +M + H +LD+ Y ++HGL A
Sbjct: 369 IR-RGLFPNKFSYTPLIHAFSKNGEYVRA-SELLIEMSERGH-TLDLIAYGALVHGLVVA 425
Query: 465 NKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+ + A + +M+ I P +++ + +K + AA+++
Sbjct: 426 GEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQL 469
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 174/407 (42%), Gaps = 32/407 (7%)
Query: 131 EHSSEIYEMMVDILGKVR---------------QMDQMRALLEEM-SKGHIVTLNTIAKV 174
E + ++Y+ MVD G V ++++ R L+E+ KG + + +
Sbjct: 184 EIARKVYDEMVDRNGDVDNYTVCIVTKGLCKEGKVEEGRHLIEKRWGKGCVPNIVFYNTL 243
Query: 175 MRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CI 233
+ + G E A F EL G +T +++ CK+GK E + +E+K +
Sbjct: 244 IDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEMKERGL 303
Query: 234 PPNAHTFNIFI-----HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
+ FN I HG C+I D +W I+ GC P + +Y+T+I C +
Sbjct: 304 AVSLQIFNGIIDARFKHG-CEIEAADAVRWMIES----GCEPDMATYNTLINGSCSKGKV 358
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
+ ELL+ +G PN +YT ++ +K+G++ A + +M G D + L
Sbjct: 359 REAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGAL 418
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
++ L A V A+ V +M E G+ PD + +N +++ G A +L EM +
Sbjct: 419 VHGLVVAGEVDVALTVRD-KMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLD-Q 476
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
+ P+ L+ + G DE ++ L + + + + +I G C+
Sbjct: 477 NVTPDAFVNATLVDGFIRHGNLDE--AKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMN 534
Query: 469 WAYLLFKEMIGHDITPRYQTCRLILDE-VKQKHMYDAAEKIEAVMKK 514
A L FK M +P T I+D VKQ + A ++KK
Sbjct: 535 DALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKK 581
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/444 (21%), Positives = 174/444 (39%), Gaps = 77/444 (17%)
Query: 122 RWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSG 180
RW C + Y ++D K +++ L +E+ KG + T+ T ++ F
Sbjct: 228 RWGKGCV---PNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCK 284
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEG-KVELARSVFLELKSCIPPNAHT 239
G++E + E+ GL + + N ++D K G ++E A +V ++S P+ T
Sbjct: 285 KGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMAT 344
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL---- 295
+N I+G C +V EA+ ++ G P SY+ +I ++ + + + ELL
Sbjct: 345 YNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMS 404
Query: 296 -------------------------------DEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
D+M +G P+ Y +MS L K G F
Sbjct: 405 ERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFP 464
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE------------- 371
A ++ +M PD+ L+ R + EA ++Q+ +
Sbjct: 465 AAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMI 524
Query: 372 --------------------NGV-APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHC 410
NGV +PD T++T+I + A + M K + C
Sbjct: 525 KGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLK-KTC 583
Query: 411 KPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWA 470
KPNV TF L+ + G + ++ ++M ++ TYT++I C+ K A
Sbjct: 584 KPNVVTFTSLINGFCRNGDLNRA-EKVFEEM-RSFGFEPNVVTYTILIGYFCKEGKLTKA 641
Query: 471 YLLFKEMIGHDITPRYQTCRLILD 494
F++M+ + P T +++
Sbjct: 642 CFFFEQMLINKCIPNDATFNYLVN 665
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 166/379 (43%), Gaps = 62/379 (16%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ K + + LL EMS +GH + L ++ AG+ + A+ D++
Sbjct: 380 YTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMM 439
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVD 254
G+ + N+L+ LCK+G+ A+ + +E L + P+A + G+ + +D
Sbjct: 440 ERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLD 499
Query: 255 EA----QWTIQE------------MKGH------------------GCH-PCVISYSTII 279
EA Q TI+ +KG+ G H P +YSTII
Sbjct: 500 EAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTII 559
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
Y +Q + + M + C PNVVT+T++++ ++GD A ++ E+M+ G +
Sbjct: 560 DGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFE 619
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
P+ + LI + ++ +A + ++ +M N P+ +TFN ++ +++ +
Sbjct: 620 PNVVTYTILIGYFCKEGKLTKACFFFE-QMLINKCIPNDATFNYLVNGLTNN-------N 671
Query: 400 VLEEMNKLEHCKPNVQT-FHPLLKS---------------CFKTGKTDECLSQLLDDMVN 443
+ +K + +PN+ F ++ S C K + QL D M++
Sbjct: 672 GIAISSKRSNSQPNLTLEFFGMMISDGWDWRIAAYNSILLCLCQHKMVKPALQLHDKMMS 731
Query: 444 KHHLSLDITTYTLVIHGLC 462
K D ++ ++HGLC
Sbjct: 732 K-GFPPDPVSFIALLHGLC 749
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 98/213 (46%), Gaps = 23/213 (10%)
Query: 132 HSSEIYEMMVDILGKVRQMDQMRAL------LEEMSKGHIVTLNTIAKVMRRFSGAGQWE 185
HS + + I G V+Q D AL L++ K ++VT ++ + F G
Sbjct: 548 HSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSL---INGFCRNGDLN 604
Query: 186 DAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIF 243
A + F+E+ +FG E N T +L+ CKEGK+ A F + + CIP +A TFN
Sbjct: 605 RAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKCIPNDA-TFNYL 663
Query: 244 IHGWCKINRV--------DEAQWTIQ---EMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
++G N + + T++ M G + +Y++I+ C+
Sbjct: 664 VNGLTNNNGIAISSKRSNSQPNLTLEFFGMMISDGWDWRIAAYNSILLCLCQHKMVKPAL 723
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEE 325
+L D+M ++G PP+ V++ ++ L G ++
Sbjct: 724 QLHDKMMSKGFPPDPVSFIALLHGLCLEGRLQD 756
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 91/204 (44%), Gaps = 3/204 (1%)
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
++++ LA+ F+E + E MK P + +I + V+EA+ +Y +
Sbjct: 100 SSLLKLLARFRVFKEIENLLETMKSKELIPTCEALSFVISAYAGSGLVKEALELYNTVID 159
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKT 430
+ PD N+++ + HHG E A V +EM N T + K K GK
Sbjct: 160 VHNCVPDVFACNSLLNLLVHHGKVEIARKVYDEMVDRNGDVDNY-TVCIVTKGLCKEGKV 218
Query: 431 DECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCR 490
+E L++ K + +I Y +I G C+ E A LLFKE+ P +T
Sbjct: 219 EEG-RHLIEKRWGKGCVP-NIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYG 276
Query: 491 LILDEVKQKHMYDAAEKIEAVMKK 514
+++ +K ++A +K+ MK+
Sbjct: 277 AMINAFCKKGKFEAVDKLLVEMKE 300
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/269 (18%), Positives = 106/269 (39%), Gaps = 48/269 (17%)
Query: 140 MVDILGKVRQMDQMRALLE-EMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
+VD + +D+ + L + + +G ++ +++ + G DA+ F +
Sbjct: 488 LVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGV 547
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRVDEAQ 257
+ T + ++D K+ + A +F L LK PN TF I+G+C+ ++ A+
Sbjct: 548 HSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAE 607
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN----------- 306
+EM+ G P V++Y+ +I +C++ +K ++M C PN
Sbjct: 608 KVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKCIPNDATFNYLVNGL 667
Query: 307 -----------------------------------VVTYTTVMSYLAKSGDFEEAIRITE 331
+ Y +++ L + + A+++ +
Sbjct: 668 TNNNGIAISSKRSNSQPNLTLEFFGMMISDGWDWRIAAYNSILLCLCQHKMVKPALQLHD 727
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
KM G PD F L++ L R+Q+
Sbjct: 728 KMMSKGFPPDPVSFIALLHGLCLEGRLQD 756
>gi|225443152|ref|XP_002263537.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80880,
mitochondrial-like [Vitis vinifera]
Length = 537
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 106/431 (24%), Positives = 196/431 (45%), Gaps = 19/431 (4%)
Query: 70 IISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWA--GSC 127
++ ++ SSE EV L + ++P+ LV I ++DW+ A +F W C
Sbjct: 85 LLKRLEGLSSEAEVMAVLDG----SGVEPNQELVYWAIWGLREDWRLAYWVFNWGEKWGC 140
Query: 128 PGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDA 187
+S +++ ILG ++ L+ E+ + + T + ++ R++ A A
Sbjct: 141 ----NSERTRGLVIWILGNCKKFGVAWCLIRELHRSSVDTRRAMLIMIDRYTAANDPCKA 196
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGW 247
++TF + F L + E LL LCK G VE A + + K P FNI ++GW
Sbjct: 197 IKTFHIMEKFRLSPDQEAFYTLLTALCKHGNVEDAEELMFQNKKLFPLETEGFNIILNGW 256
Query: 248 CKIN-RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
++ + EA+ +EM P +Y+ +I + + N L D+M+ +G P
Sbjct: 257 SNVSLDIFEAKRIWREMSKCCIVPNATTYTLMISCFSKFGNLFDSLRLFDDMKKRGWIPG 316
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
+ Y +++ L EA++I K+K +G + DS +NC+I L +A +++EA +
Sbjct: 317 LEVYNSLIYVLTHENCLTEALKILGKIKEMGLQLDSASYNCMIRPLCKAKKLEEARTILA 376
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
+ EN + P T T++ F +E+ F VL+ + + PN TF +L + FK
Sbjct: 377 AMIGEN-LGPTTETYHA----FLEGASYEETFEVLKNL-RTAGFGPNGDTFLLILDNLFK 430
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
+ + L ++ + + + Y ++I GL + A L+ EM
Sbjct: 431 LDQPENALKIWVE--MKQFDVVPGSEHYKVLIEGLTKFGWLVKARELYAEMRSKGFLDDP 488
Query: 487 QTCRLILDEVK 497
+ +L+ D V+
Sbjct: 489 KLKKLLKDPVE 499
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 115/269 (42%), Gaps = 22/269 (8%)
Query: 258 WTIQEMKGHGCHPCVI------------SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
W + K G C+I + +I Y + K + M+ P
Sbjct: 151 WILGNCKKFGVAWCLIRELHRSSVDTRRAMLIMIDRYTAANDPCKAIKTFHIMEKFRLSP 210
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRAS-RVQEAVYV 364
+ + T+++ L K G+ E+A + + K + ++ FN ++ S + EA +
Sbjct: 211 DQEAFYTLLTALCKHGNVEDAEELMFQNKKLFPL-ETEGFNIILNGWSNVSLDIFEAKRI 269
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
++ EM + + P+ +T+ MI+ FS G+ + + ++M K P ++ ++ L+
Sbjct: 270 WR-EMSKCCIVPNATTYTLMISCFSKFGNLFDSLRLFDDMKK-RGWIPGLEVYNSLIYVL 327
Query: 425 FKTGKTDECLSQLLDDM--VNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
+ CL++ L + + + L LD +Y +I LC+A K E A + MIG ++
Sbjct: 328 ----THENCLTEALKILGKIKEMGLQLDSASYNCMIRPLCKAKKLEEARTILAAMIGENL 383
Query: 483 TPRYQTCRLILDEVKQKHMYDAAEKIEAV 511
P +T L+ + ++ + +
Sbjct: 384 GPTTETYHAFLEGASYEETFEVLKNLRTA 412
>gi|218186396|gb|EEC68823.1| hypothetical protein OsI_37392 [Oryza sativa Indica Group]
Length = 1370
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 154/303 (50%), Gaps = 5/303 (1%)
Query: 207 NLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKG 265
N LL L ++ + + R ++ E L + ++ + + G C RV+E I+ G
Sbjct: 930 NHLLKLLVEQRRWDDGRKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWG 989
Query: 266 HGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEE 325
GC P V+ Y+ +I YCR+ + + LL EM+ +G P +VTY +++++L K GD E+
Sbjct: 990 AGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEK 1049
Query: 326 AIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMI 385
+ +M+ G P+ + +N +I L +A+ + + +M +G PD TFNT++
Sbjct: 1050 IGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILK-QMFASGCDPDIITFNTLM 1108
Query: 386 TMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKH 445
T H GH KA H L E + E PN ++ PL+ G+ S LL +M+ +
Sbjct: 1109 TGLCHEGHVRKAEHFLREAIRRE-LNPNQLSYTPLIHGFCMRGEL-MVASDLLVEMMGRG 1166
Query: 446 HLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
H + D+ T+ +IHGL A K A ++ ++M + P +++ + +K M AA
Sbjct: 1167 H-TPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAA 1225
Query: 506 EKI 508
+ I
Sbjct: 1226 KNI 1228
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 140/323 (43%), Gaps = 14/323 (4%)
Query: 122 RWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALL---EEMSKGHIVTLNTIAKVMRRF 178
RW C + Y +++D G R+ D R LL E +KG + TL T ++
Sbjct: 987 RWGAGCIPH---VVFYNVLID--GYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWL 1041
Query: 179 SGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNA 237
G E F E+ G N + N ++D LC A + ++ S P+
Sbjct: 1042 GKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDI 1101
Query: 238 HTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDE 297
TFN + G C V +A+ ++E +P +SY+ +I +C + +LL E
Sbjct: 1102 ITFNTLMTGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVE 1161
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
M +G P+VVT+ ++ L +G EA+ + EKM PD +N LI L +
Sbjct: 1162 MMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRM 1221
Query: 358 VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTF 417
+ A + + EM E V PD + T+I F + A + E M C P++ +
Sbjct: 1222 LPAAKNILE-EMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVC-PDIVSC 1279
Query: 418 HPLLKSCFKTGKTDE---CLSQL 437
+ ++K + G E C+S +
Sbjct: 1280 NAMIKGYCQFGMMSEAILCMSNM 1302
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 97/243 (39%), Gaps = 37/243 (15%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKG---HIVTLNTIA------------ 172
G+ + +IY ++D L R Q +L++M + G I+T NT+
Sbjct: 1061 GFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLMTGLCHEGHVRKA 1120
Query: 173 -----KVMRR---------------FSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDT 212
+ +RR F G+ A E+ G + T L+
Sbjct: 1121 EHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHG 1180
Query: 213 LCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPC 271
L GKV A V ++ + + P+ + +N+ I G CK + A+ ++EM P
Sbjct: 1181 LVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPD 1240
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
Y+T+I + R N ++ + M+ +G P++V+ ++ + G EAI
Sbjct: 1241 EFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMS 1300
Query: 332 KMK 334
M+
Sbjct: 1301 NMR 1303
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 109/425 (25%), Positives = 206/425 (48%), Gaps = 28/425 (6%)
Query: 94 NAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDIL---GKVRQM 150
+AI PSH V+ L D K+AL W P Y+HS Y ++ +L G V +
Sbjct: 86 SAISPSH--VSSLFS-LDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVV 142
Query: 151 DQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKN--TETMNL 208
++R L+ I + +++ + D R ++ F L+ N
Sbjct: 143 FKIRLLM-------IKSCDSVGDALYVL-------DLCRKMNKDERFELKYKLIIGCYNT 188
Query: 209 LLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG 267
LL++L + G V+ + V++E L+ + PN +T+N ++G+CK+ V+EA + ++ G
Sbjct: 189 LLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAG 248
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
P +Y+++I YC++ + +++ +EM +GC N V YT ++ L + +EA+
Sbjct: 249 LDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAM 308
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITM 387
+ KMK P R + LI +L + R EA+ + + EM E G+ P+ T+ +I
Sbjct: 309 DLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVK-EMEETGIKPNIHTYTVLIDS 367
Query: 388 FSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHL 447
EKA +L +M + + PNV T++ L+ K G ++ + + +++ L
Sbjct: 368 LCSQCKFEKARELLGQMLE-KGLMPNVITYNALINGYCKRGMIEDAVDVV--ELMESRKL 424
Query: 448 SLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEK 507
S + TY +I G C++N A + +M+ + P T ++D + +D+A +
Sbjct: 425 SPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYR 483
Query: 508 IEAVM 512
+ ++M
Sbjct: 484 LLSLM 488
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 155/306 (50%), Gaps = 8/306 (2%)
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS--CIPPNAHTFNI 242
+ A + F+E+ G +N L+ LC +++ A +F+++K C P T+ +
Sbjct: 270 DSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFP-TVRTYTV 328
Query: 243 FIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
I C R EA ++EM+ G P + +Y+ +I S C Q F K ELL +M +G
Sbjct: 329 LIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKG 388
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
PNV+TY +++ K G E+A+ + E M+ P++R +N LI + S V +A+
Sbjct: 389 LMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAM 447
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLK 422
V +M E V PD T+N++I G+ + A+ +L MN P+ T+ ++
Sbjct: 448 GVLN-KMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMND-RGLVPDQWTYTSMID 505
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
S K+ + +E L D + + ++ ++ YT +I G C+A K + A+L+ ++M+ +
Sbjct: 506 SLCKSKRVEEACD--LFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNC 563
Query: 483 TPRYQT 488
P T
Sbjct: 564 LPNSLT 569
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 170/367 (46%), Gaps = 17/367 (4%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G + + Y +++D L + ++ R LL +M KG + + T ++ + G EDA
Sbjct: 353 GIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDA 412
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHG 246
V + + + L NT T N L+ CK V A V + L+ + P+ T+N I G
Sbjct: 413 VDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDG 471
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C+ D A + M G P +Y+++I S C+ + +L D ++ +G PN
Sbjct: 472 QCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPN 531
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
VV YT ++ K+G +EA + EKM P+S FN LI+ L +++EA + +
Sbjct: 532 VVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEE 591
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
+M + G+ P ST +I G + A+ ++M KP+ T+ +++ +
Sbjct: 592 -KMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLS-SGTKPDAHTYTTFIQTYCR 649
Query: 427 TGKTDECLSQLLD--DMVNK---HHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHD 481
G+ LLD DM+ K + +S D+ TY+ +I G + +A+ + K M
Sbjct: 650 EGR-------LLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTG 702
Query: 482 ITPRYQT 488
P T
Sbjct: 703 CEPSQHT 709
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 102/433 (23%), Positives = 187/433 (43%), Gaps = 58/433 (13%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++D + D LL M+ +G + T ++ + + E+A FD L
Sbjct: 465 YNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLE 524
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRV 253
G+ N L+D CK GKV+ A + ++ K+C+P N+ TFN IHG C ++
Sbjct: 525 QKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLP-NSLTFNALIHGLCADGKL 583
Query: 254 DEA------------QWTI-----------------------QEMKGHGCHPCVISYSTI 278
EA Q T+ Q+M G P +Y+T
Sbjct: 584 KEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTF 643
Query: 279 IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
IQ+YCR+ +++ +M+ G P++ TY++++ G A + ++M+ G
Sbjct: 644 IQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGC 703
Query: 339 KPDSRFFNCLIYTL-----GR----------ASRVQEAVYVYQV--EMPENGVAPDTSTF 381
+P F LI L G+ S + E V ++ +M E+ V P+ ++
Sbjct: 704 EPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSY 763
Query: 382 NTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDM 441
+I G+ A V + M + E P+ F+ LL C K K +E ++++DDM
Sbjct: 764 EKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEA-AKVVDDM 822
Query: 442 VNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHM 501
+ HL + + ++I GL + + E +F+ ++ ++I+D V ++ +
Sbjct: 823 ICVGHLP-QLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGL 881
Query: 502 YDAAEKIEAVMKK 514
+A ++ VM+K
Sbjct: 882 VEAFYELFNVMEK 894
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 188/375 (50%), Gaps = 10/375 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQW-EDAVRTFDEL 194
+++ +L ++ + + R LL+++ S G +VT+++ + R + + E A++ F E
Sbjct: 193 FDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVFCE- 251
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRV 253
+G+ NT + N+++ +LC+ GKV+ A + +++ P+ +++ I G+C + +
Sbjct: 252 --YGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGEL 309
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
+A + +M+ G P +Y++II C+ + ++L EM +Q P+ V YTT+
Sbjct: 310 KKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTL 369
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
+ K G A + ++M PD + LI G+ +V E ++ EM G
Sbjct: 370 IHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFH-EMISRG 428
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
+ PD T+ T+I ++ G AF + EM ++ PN+ T+ L+ K G+ D
Sbjct: 429 LKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQM-GMTPNIVTYGALIDGLCKHGELDTA 487
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
++LLD+M K L L++ Y +++G+C+A E A L KEM I P T ++
Sbjct: 488 -NELLDEM-RKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVI 545
Query: 494 DEVKQKHMYDAAEKI 508
D + D A K+
Sbjct: 546 DAYCRLGDIDKAHKL 560
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 183/388 (47%), Gaps = 8/388 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTI-AKVMRRFSGAGQWEDA 187
G + + Y ++ +L K+ + + +L EM I+ N + ++ F G A
Sbjct: 323 GLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTA 382
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHG 246
+ FDE+ + + + T L+ + GKV +++F E+ S + P+ T+ I
Sbjct: 383 NKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDV 442
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
+CK + A EM G P +++Y +I C+ ELLDEM+ +G N
Sbjct: 443 YCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLN 502
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
V Y ++++ + K+G+ E+AI++ ++M++ G PD+ + +I R + +A + Q
Sbjct: 503 VCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQ 562
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS-CF 425
EM + G+ P TFN ++ F G E +L M + + P+ T++ L+K C
Sbjct: 563 -EMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLE-KGIVPDAITYNTLMKQHCI 620
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
+ +++ M N+ ++ D TY ++I G C+A + A+ L+KEMI P
Sbjct: 621 RNSMNTT--TKIYKRMRNQG-VAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPT 677
Query: 486 YQTCRLILDEVKQKHMYDAAEKIEAVMK 513
+ ++ +K + A ++ M+
Sbjct: 678 VTSYNALIKRFYKKRKFXEARELFEEMR 705
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 122/507 (24%), Positives = 216/507 (42%), Gaps = 67/507 (13%)
Query: 2 ICHLQKYLKQARIPLNPLTSRIRFHSSSENCSHIVSSSPIESYCSDG------ARLDHHQ 55
+C L K + R L ++ F SS+ + + S+ I+ YC G +D Q
Sbjct: 268 LCRLGKVKEAHR-----LLMQMDFRSSTPDV--VSYSTVIDGYCHLGELKKALKLMDDMQ 320
Query: 56 VLCVDSPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWK 115
+ + R +I+ +G S + + + ++ + I P + + LIH F
Sbjct: 321 IKGLKPNRYTYNSIILLLCKIGKSFEA--EKVLREMMSQKIIPDNVVYTTLIHGF----- 373
Query: 116 SALGIFRWAGSCPGYEHSSEI------YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTL 168
LG R A S +I Y ++ G+ ++ + + L EM S+G
Sbjct: 374 FKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDE 433
Query: 169 NTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE 228
T ++ + AG+ +A +E+ G+ N T L+D LCK G+++ A + E
Sbjct: 434 VTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDE 493
Query: 229 L-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYN 287
+ K + N +N ++G CK +++A ++EM+ G P I+Y+T+I +YCR +
Sbjct: 494 MRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGD 553
Query: 288 FSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNC 347
K ++LL EM +G P VVT+ +M+ G E+ R+ M G PD+ +N
Sbjct: 554 IDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNT 613
Query: 348 LIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKL 407
L+ + + +Y+ M GVAPD++T+N +I
Sbjct: 614 LMKQHCIRNSMNTTTKIYK-RMRNQGVAPDSNTYNILIK--------------------- 651
Query: 408 EHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKC 467
HCK L ++ F L +M+ K ++ +T+Y +I + K
Sbjct: 652 GHCKA-----RNLKEAWF-----------LYKEMIEKGYVP-TVTSYNALIKRFYKKRKF 694
Query: 468 EWAYLLFKEMIGHDITPRYQTCRLILD 494
A LF+EM GH + + +D
Sbjct: 695 XEARELFEEMRGHGLVADGEIYNFFVD 721
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 150/318 (47%), Gaps = 5/318 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
G + Y ++D+ K +M +L EM + G + T ++ G+ + A
Sbjct: 428 GLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTA 487
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHG 246
DE+ GL+ N N +++ +CK G +E A + E++ + I P+A T+ I
Sbjct: 488 NELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDA 547
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
+C++ +D+A +QEM G P V++++ ++ +C LL M +G P+
Sbjct: 548 YCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPD 607
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
+TY T+M +I ++M+ G PDS +N LI +A ++EA ++Y+
Sbjct: 608 AITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYK 667
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
EM E G P +++N +I F +A + EEM + + + ++ + C++
Sbjct: 668 -EMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEM-RGHGLVADGEIYNFFVDMCYE 725
Query: 427 TGKTDECLSQLLDDMVNK 444
G + L+ L D+ + K
Sbjct: 726 EGDVEITLN-LCDEAIEK 742
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 145/334 (43%), Gaps = 42/334 (12%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK-VELARSVFLELKSCIPPNAHTF 240
G +A + D+L ++GL ++ N L + + +E+A VF E
Sbjct: 204 GHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVFCE------------ 251
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
+G SY+ II S CR + + LL +M
Sbjct: 252 -------------------------YGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDF 286
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
+ P+VV+Y+TV+ G+ ++A+++ + M+I G KP+ +N +I L + + E
Sbjct: 287 RSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFE 346
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
A V + EM + PD + T+I F GH A +EM + P+ T+ L
Sbjct: 347 AEKVLR-EMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLS-KKISPDYITYTTL 404
Query: 421 LKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH 480
++ + GK E L +M+++ L D TYT +I C+A + A+ L EM+
Sbjct: 405 IQGFGQGGKVIEP-QNLFHEMISRG-LKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQM 462
Query: 481 DITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
+TP T ++D + + D A ++ M+K
Sbjct: 463 GMTPNIVTYGALIDGLCKHGELDTANELLDEMRK 496
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 163/334 (48%), Gaps = 14/334 (4%)
Query: 183 QWEDAVRTFDELGTFGLEKNTETM------NLLLDTLCKEGKVELARSVFL---ELKSCI 233
W ++ D +G FG + + N LL + K K +L S+ L +K
Sbjct: 16 SWGKDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGY 75
Query: 234 PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
P+ T + ++G+C R+ +A + +M G P I+++T+I S+
Sbjct: 76 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 135
Query: 294 LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLG 353
L+D M +GC PN+VTY V++ L K GD + A + KM+ + D FN +I +L
Sbjct: 136 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLC 195
Query: 354 RASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPN 413
+ V +A+ +++ EM G+ P+ T++++I+ +G A +L +M + + PN
Sbjct: 196 KYRHVDDALNLFK-EMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE-KKINPN 253
Query: 414 VQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLL 473
+ TF+ L+ + K GK E +L DDM+ K + DI TY +I+G C ++ + A +
Sbjct: 254 LVTFNALIDAFVKEGKFVEA-EKLHDDMI-KRSIDPDIFTYNSLINGFCMHDRLDKAKQM 311
Query: 474 FKEMIGHDITPRYQTCR-LILDEVKQKHMYDAAE 506
F+ M+ D P T LI K K + D E
Sbjct: 312 FEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTE 345
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 98/383 (25%), Positives = 188/383 (49%), Gaps = 10/383 (2%)
Query: 137 YEMMVDILGKVRQMDQM--RALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDE 193
+ ++ + K+++ D + ALL +M K G+ ++ T++ ++ + + DAV D+
Sbjct: 45 FNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 104
Query: 194 LGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKIN 251
+ G +T T L+ L K A ++ + + C PN T+ + ++G CK
Sbjct: 105 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGC-QPNLVTYGVVVNGLCKRG 163
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
+D A + +M+ V+ ++TII S C+ + L EM+ +G PNVVTY+
Sbjct: 164 DIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 223
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
+++S L G + +A ++ M P+ FN LI + + EA ++ +M +
Sbjct: 224 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHD-DMIK 282
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
+ PD T+N++I F H +KA + E M + C P++ T++ L+K K+ + +
Sbjct: 283 RSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVS-KDCFPDLDTYNTLIKGFCKSKRVE 341
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRL 491
+ ++L +M ++ L D TYT +I GL C+ A +FK+M+ + P T +
Sbjct: 342 DG-TELFREMSHRG-LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 399
Query: 492 ILDEVKQKHMYDAAEKIEAVMKK 514
+LD + + A ++ M+K
Sbjct: 400 LLDGLCNNGKLEKALEVFDYMQK 422
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 165/368 (44%), Gaps = 40/368 (10%)
Query: 183 QWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFN 241
+ +AV D + G + N T ++++ LCK G ++LA ++ ++++ I + FN
Sbjct: 129 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFN 188
Query: 242 IFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ 301
I CK VD+A +EM+ G P V++YS++I C +S +LL +M +
Sbjct: 189 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 248
Query: 302 GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM---------------------------- 333
PN+VT+ ++ K G F EA ++ + M
Sbjct: 249 KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKA 308
Query: 334 ----KIVGSK---PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
+ + SK PD +N LI ++ RV++ +++ EM G+ DT T+ T+I
Sbjct: 309 KQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFR-EMSHRGLVGDTVTYTTLIQ 367
Query: 387 MFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHH 446
H G + A V ++M + P++ T+ LL GK ++ L D + K
Sbjct: 368 GLFHDGDCDNAQKVFKQMVS-DGVPPDIMTYSILLDGLCNNGKLEKALEVF--DYMQKSE 424
Query: 447 LSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAE 506
+ LDI YT +I G+C+A K + + LF + + P T ++ + K + A
Sbjct: 425 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 484
Query: 507 KIEAVMKK 514
+ MK+
Sbjct: 485 ALLKKMKE 492
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 169/366 (46%), Gaps = 15/366 (4%)
Query: 131 EHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVR 189
E I+ ++D L K R +D L +EM +KG + T + ++ G+W DA +
Sbjct: 181 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 240
Query: 190 TFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWC 248
++ + N T N L+D KEGK A + ++ K I P+ T+N I+G+C
Sbjct: 241 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFC 300
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
+R+D+A+ + M C P + +Y+T+I+ +C+ EL EM +G + V
Sbjct: 301 MHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 360
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
TYTT++ L GD + A ++ ++M G PD ++ L+ L ++++A+ V+
Sbjct: 361 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY- 419
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M ++ + D + TMI G + + + ++ L+ KPNV T++ ++
Sbjct: 420 MQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS-LKGVKPNVVTYNTMISGLCSKR 478
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
E + LL M L D TY +I R + L +EM ++
Sbjct: 479 LLQEAYA-LLKKMKEDGPLP-DSGTYNTLIRAHLRDGDKAASAELIREM---------RS 527
Query: 489 CRLILD 494
CR + D
Sbjct: 528 CRFVGD 533
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 185/382 (48%), Gaps = 13/382 (3%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQW 184
GY Y +V+ + ++D++ L+E M + + +I ++ R +
Sbjct: 719 GYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEA 778
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIF 243
E+A F E+ G+ +T L+D CK G + A F E+ S I P+ T+
Sbjct: 779 EEA---FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAI 835
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
I G+C+I + EA EM G P ++++ +I YC+ + + + + M GC
Sbjct: 836 ISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGC 895
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
PNVVTYTT++ L K GD + A + +M +G +P+ +N ++ L ++ ++EAV
Sbjct: 896 SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 955
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
+ E G+ DT T+ T++ + G +KA +L+EM + +P + TF+ L+
Sbjct: 956 LVG-EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLG-KGLQPTIVTFNVLMNG 1013
Query: 424 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
G ++ +LL+ M+ K ++ + TT+ ++ C N + A ++K+M +
Sbjct: 1014 FCLHGMLEDG-EKLLNWMLAK-GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVG 1071
Query: 484 PRYQTCR-LILDEVKQKHMYDA 504
P +T L+ K ++M +A
Sbjct: 1072 PDGKTYENLVKGHCKARNMKEA 1093
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 186/390 (47%), Gaps = 9/390 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTI-AKVMRRFSGAGQWEDA 187
G + +S IY ++ +L ++ ++ + EM + I+ + ++ F G A
Sbjct: 754 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 813
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHG 246
+ F E+ + + + T ++ C+ G + A +F E+ + P++ TF I+G
Sbjct: 814 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING 873
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
+CK + +A M GC P V++Y+T+I C++ + ELL EM G PN
Sbjct: 874 YCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 933
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
+ TY ++++ L KSG+ EEA+++ + + G D+ + L+ ++ + +A + +
Sbjct: 934 IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 993
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS-CF 425
EM G+ P TFN ++ F HG E +L M + PN TF+ L+K C
Sbjct: 994 -EMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA-KGIAPNATTFNSLVKQYCI 1051
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
+ + + + DM ++ + D TY ++ G C+A + A+ LF+EM G +
Sbjct: 1052 RNNL--KAATAIYKDMCSRG-VGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVS 1108
Query: 486 YQTCR-LILDEVKQKHMYDAAEKIEAVMKK 514
T LI +K+K +A E + + ++
Sbjct: 1109 VSTYSVLIKGFLKRKKFLEAREVFDQMRRE 1138
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/411 (22%), Positives = 188/411 (45%), Gaps = 42/411 (10%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFS-GAGQWEDAVRTFDE 193
++++ +L + + R + E+M + G ++++++ + R S + A+ F E
Sbjct: 620 VFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFRE 679
Query: 194 LGTFGLEKNTETMNLLLDTLCKEGKVELARSVFL--ELKSCIP----------------- 234
G+ N + N+++ +C+ G+++ A + L ELK P
Sbjct: 680 FPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGE 739
Query: 235 -----------------PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
PN++ + I C+I ++ EA+ EM G P + Y+T
Sbjct: 740 LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTT 799
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+I +C++ + + EM ++ P+V+TYT ++S + GD EA ++ +M G
Sbjct: 800 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 859
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKA 397
+PDS F LI +A +++A V+ M + G +P+ T+ T+I G + A
Sbjct: 860 LEPDSVTFTELINGYCKAGHMKDAFRVHN-HMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 918
Query: 398 FHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLV 457
+L EM K+ +PN+ T++ ++ K+G +E + L L+ D TYT +
Sbjct: 919 NELLHEMWKI-GLQPNIFTYNSIVNGLCKSGNIEEAVK--LVGEFEAAGLNADTVTYTTL 975
Query: 458 IHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+ C++ + + A + KEM+G + P T ++++ M + EK+
Sbjct: 976 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL 1026
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 150/324 (46%), Gaps = 11/324 (3%)
Query: 127 CPGYEHSSEIYEMMVDILGKVRQM-DQMRA---LLEEMSKGHIVTLNTIAKVMRRFSGAG 182
C G E S + +++ K M D R +++ ++VT T+ + + G
Sbjct: 857 CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK---EG 913
Query: 183 QWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFN 241
+ A E+ GL+ N T N +++ LCK G +E A + E ++ + + T+
Sbjct: 914 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 973
Query: 242 IFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ 301
+ +CK +D+AQ ++EM G G P +++++ ++ +C +LL+ M A+
Sbjct: 974 TLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK 1033
Query: 302 GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
G PN T+ +++ + + A I + M G PD + + L+ +A ++EA
Sbjct: 1034 GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEA 1093
Query: 362 VYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLL 421
+++Q EM G + ST++ +I F +A V ++M + E + + F
Sbjct: 1094 WFLFQ-EMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRR-EGLAADKEIFDFFS 1151
Query: 422 KSCFKTGKTDECLSQLLDDMVNKH 445
+ +K GK + + +D+++ +
Sbjct: 1152 DTKYK-GKRPDTIVDPIDEIIENY 1174
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 148/335 (44%), Gaps = 39/335 (11%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKE-GKVELARSVFLELKSCIPPNAHTF 240
G +A R F+++ +GL + ++ N+ L L K+ K A VF E
Sbjct: 632 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEV-------- 683
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
G C W V SY+ +I C+ + + LL M+
Sbjct: 684 -----GVC---------WN------------VASYNIVIHFVCQLGRIKEAHHLLLLMEL 717
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
+G P+V++Y+TV++ + G+ ++ ++ E MK G KP+S + +I L R ++ E
Sbjct: 718 KGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAE 777
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
A + EM G+ PDT + T+I F G A EM+ + P+V T+ +
Sbjct: 778 AEEAFS-EMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRD-ITPDVLTYTAI 835
Query: 421 LKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH 480
+ + G E +L +M K L D T+T +I+G C+A + A+ + MI
Sbjct: 836 ISGFCQIGDMVEA-GKLFHEMFCKG-LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA 893
Query: 481 DITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
+P T ++D + ++ D+A ++ M K+
Sbjct: 894 GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 928
>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
Length = 538
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 105/416 (25%), Positives = 185/416 (44%), Gaps = 44/416 (10%)
Query: 97 QPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRAL 156
Q L KL R K + + +F S G + Y+++VD L +Q L
Sbjct: 20 QAFTLLATKLFRRSK--FSEVVRLFTLLAS-RGVVYGETTYKLVVDGLCGAGMANQALEL 76
Query: 157 LEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKE 216
+ E+S + TL ++ A + DA + +++ + N T +LL+ LC+
Sbjct: 77 VRELSGVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRS 136
Query: 217 GKVELARSVFLELK-SCIPPNAHTFNIFIH------------------------------ 245
K +LAR VF E+K + PN T+ I
Sbjct: 137 NKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITC 196
Query: 246 -----GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
G CK +R+D+A ++EM+ G P ++YS ++ + + +V +E +A
Sbjct: 197 TTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKA 256
Query: 301 -QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
+G Y + L K+G + A + E+++ G PD ++ LI T RA +
Sbjct: 257 RKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFD 316
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
++ + + +M NGV PD T++T+I + + AF +LE M PNV T++
Sbjct: 317 ASLELLE-DMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEA-AGSPPNVVTYNS 374
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFK 475
++ K+GK DE + +M+ K S D+ TY+++++GL +A + A LF+
Sbjct: 375 VMDGLCKSGKMDEV--HRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFE 428
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 171/377 (45%), Gaps = 42/377 (11%)
Query: 173 KVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC 232
K+ RR ++ + VR F L + G+ T L++D LC G A + EL
Sbjct: 28 KLFRR----SKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQALELVRELSGV 83
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
P +N I G C+ +RV +A +++M P V +Y+ ++ CR
Sbjct: 84 YTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAR 143
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
E+ EM+ GC PN +TY T++ +L+++G+ +EA+R+ + + + D ++ L
Sbjct: 144 EVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGL 203
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEE-----MNKL 407
+ASR+ +A+ + EM + GV P+ T++ ++ F HG ++ EE L
Sbjct: 204 CKASRLDDALK-FMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSL 262
Query: 408 EH----------CK--------------------PNVQTFHPLLKSCFKTGKTDECLSQL 437
E CK P+V T+ L+ + + G+ D L +L
Sbjct: 263 EAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASL-EL 321
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVK 497
L+DM ++ + D+ TY+ +I+ LC+ K + A+ L + M P T ++D +
Sbjct: 322 LEDM-RRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLC 380
Query: 498 QKHMYDAAEKIEAVMKK 514
+ D ++ +M K
Sbjct: 381 KSGKMDEVHRVYEMMLK 397
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 141/275 (51%), Gaps = 19/275 (6%)
Query: 140 MVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
+V L K ++D +EEM + G T + ++ F G+ + +R F+E
Sbjct: 199 IVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEE----- 253
Query: 199 LEKNTETMNL-------LLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKI 250
EK + +L LD LCK G ++ AR EL+ S + P+ T+++ I+ + +
Sbjct: 254 -EKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARA 312
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
+ D + +++M+ +G P V++YST+I C++ F + LL+ M+A G PPNVVTY
Sbjct: 313 GQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTY 372
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
+VM L KSG +E R+ E M PD ++ ++ L +A + AV ++++ +
Sbjct: 373 NSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFEL-IK 431
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKA---FHVLE 402
+ PD + ++ +IT G E+A +H +E
Sbjct: 432 SSREGPDAAAYSMVITSLCRAGKLEEACGMYHGME 466
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 130/278 (46%), Gaps = 5/278 (1%)
Query: 95 AIQPSHYLVNKLIHRFKD--DWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQ 152
++P+ + L+H F+ + + F + G + Y +D L K +D+
Sbjct: 223 GVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDR 282
Query: 153 MRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLD 211
R +EE+ + +V + T + ++ F+ AGQ++ ++ +++ G++ + T + L++
Sbjct: 283 ARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLIN 342
Query: 212 TLCKEGKVELA-RSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHP 270
LCKE K + A R + L + PPN T+N + G CK ++DE + M C P
Sbjct: 343 VLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSP 402
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRIT 330
V++YS I+ + +L + +++ P+ Y+ V++ L ++G EEA +
Sbjct: 403 DVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMY 462
Query: 331 EKMKI-VGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
M++ V R L+ L A R A + +V
Sbjct: 463 HGMEVTVAGDNICRALAGLVAALCDAERTDSARRIVEV 500
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 5/211 (2%)
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
+++ + R+ FS+V L + ++G TY V+ L +G +A+ + ++
Sbjct: 21 AFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQALELVREL 80
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
V + P +N +I L RASRV +A V + +M E + P+ T+ ++
Sbjct: 81 SGVYT-PTLFIYNGIITGLCRASRVMDAYKVLE-KMVEESIVPNVFTYTILLNGLCRSNK 138
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
+ A V +EM K CKPN T+ L++ + G+ DE L +++ L D+ T
Sbjct: 139 TKLAREVFQEM-KRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQ--RSLELPTDVIT 195
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
T ++ GLC+A++ + A +EM + P
Sbjct: 196 CTTIVGGLCKASRLDDALKFMEEMRQMGVRP 226
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 84/172 (48%), Gaps = 5/172 (2%)
Query: 337 GSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEK 396
G K DS+ F L L R S+ E V ++ + + GV +T+ ++ G +
Sbjct: 14 GVKVDSQAFTLLATKLFRRSKFSEVVRLFTL-LASRGVVYGETTYKLVVDGLCGAGMANQ 72
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTL 456
A ++ E++ + P + ++ ++ + + + ++L+ MV + + ++ TYT+
Sbjct: 73 ALELVRELSGV--YTPTLFIYNGIITGLCRASRVMDAY-KVLEKMV-EESIVPNVFTYTI 128
Query: 457 VIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+++GLCR+NK + A +F+EM + P T ++ + + D A ++
Sbjct: 129 LLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRV 180
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 177/383 (46%), Gaps = 45/383 (11%)
Query: 151 DQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD---ELGTFGLEKNTETMN 207
D AL +EM + L ++ R FS + + D +L G+ N T+N
Sbjct: 70 DDAIALFQEMIRSR--PLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 208 LLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
++++ C+ K A SV + +K P+ TFN I G +V EA + M +
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
GC P V++Y++I+ CR + S +LL +M+ + +V TY+T++ L + G + A
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247
Query: 327 IRITEKMKIVGSK-----------------------------------PDSRFFNCLIYT 351
I + ++M+ G K P+ FN L+
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307
Query: 352 LGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCK 411
+ ++QEA +Y+ EM G++P+ T+NT++ + +A ++L+ M + C
Sbjct: 308 FVKEGKLQEANELYK-EMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR-NKCS 365
Query: 412 PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAY 471
P++ TF L+K + D+ + + ++K L + TY++++ G C++ K + A
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRN--ISKRGLVANAVTYSILVQGFCQSGKIKLAE 423
Query: 472 LLFKEMIGHDITPRYQTCRLILD 494
LF+EM+ H + P T ++LD
Sbjct: 424 ELFQEMVSHGVLPDVMTYGILLD 446
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/438 (24%), Positives = 199/438 (45%), Gaps = 24/438 (5%)
Query: 62 PRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIF 121
P L D S + + V KQ + N I + Y +N +I+ F K+ +
Sbjct: 86 PSLVDFSRFFSAIARTKQFNLVLDFCKQLEL-NGIAHNIYTLNIMINCFCRCCKTCFA-Y 143
Query: 122 RWAGSCP--GYEHSSEIYEMMVDIL---GKVRQ----MDQMRALLEEMSKGHIVTLNTIA 172
G GYE + + ++ L GKV + +D+M +E + +VT N+I
Sbjct: 144 SVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM---VENGCQPDVVTYNSIV 200
Query: 173 KVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS- 231
+ R D +R +E ++ + T + ++D+LC++G ++ A S+F E+++
Sbjct: 201 NGICRSGDTSLALDLLRKMEERN---VKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK 257
Query: 232 CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKV 291
I + T+N + G CK + ++ +++M P VI+++ ++ + ++ +
Sbjct: 258 GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 317
Query: 292 YELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYT 351
EL EM +G PN++TY T+M EA + + M PD F LI
Sbjct: 318 NELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG 377
Query: 352 LGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH-C 410
RV + + V++ + + G+ + T++ ++ F G + A + +EM + H
Sbjct: 378 YCMVKRVDDGMKVFR-NISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM--VSHGV 434
Query: 411 KPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWA 470
P+V T+ LL GK ++ L ++ +D+ K + L I YT +I G+C+ K E A
Sbjct: 435 LPDVMTYGILLDGLCDNGKLEKAL-EIFEDL-QKSKMDLGIVMYTTIIEGMCKGGKVEDA 492
Query: 471 YLLFKEMIGHDITPRYQT 488
+ LF + + P T
Sbjct: 493 WNLFCSLPCKGVKPNVMT 510
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 160/329 (48%), Gaps = 8/329 (2%)
Query: 150 MDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLL 209
+D +R + E K + T +TI + R G + A+ F E+ T G++ + T N L
Sbjct: 213 LDLLRKMEERNVKADVFTYSTIIDSLCR---DGCIDAAISLFKEMETKGIKSSVVTYNSL 269
Query: 210 LDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGC 268
+ LCK GK + ++ S I PN TFN+ + + K ++ EA +EM G
Sbjct: 270 VRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGI 329
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
P +I+Y+T++ YC Q S+ +LD M C P++VT+T+++ ++ ++
Sbjct: 330 SPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMK 389
Query: 329 ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF 388
+ + G ++ ++ L+ ++ +++ A ++Q EM +GV PD T+ ++
Sbjct: 390 VFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ-EMVSHGVLPDVMTYGILLDGL 448
Query: 389 SHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
+G EKA + E++ K + + +++ K GK ++ + + +
Sbjct: 449 CDNGKLEKALEIFEDLQK-SKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCS--LPCKGVK 505
Query: 449 LDITTYTLVIHGLCRANKCEWAYLLFKEM 477
++ TYT++I GLC+ A +L ++M
Sbjct: 506 PNVMTYTVMISGLCKKGSLSEANILLRKM 534
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 141/329 (42%), Gaps = 45/329 (13%)
Query: 116 SALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIV----TLNTI 171
+A+ +F+ + G + S Y +V L K + + LL++M IV T N +
Sbjct: 246 AAISLFKEMET-KGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304
Query: 172 AKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LEL 229
V F G+ ++A + E+ T G+ N T N L+D C + ++ A ++ +
Sbjct: 305 LDV---FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR 361
Query: 230 KSCIP----------------------------------PNAHTFNIFIHGWCKINRVDE 255
C P NA T++I + G+C+ ++
Sbjct: 362 NKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKL 421
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
A+ QEM HG P V++Y ++ C K E+ +++Q +V YTT++
Sbjct: 422 AEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIE 481
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
+ K G E+A + + G KP+ + +I L + + EA + + +M E+G A
Sbjct: 482 GMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLR-KMEEDGNA 540
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
P+ T+NT+I G + ++EEM
Sbjct: 541 PNDCTYNTLIRAHLRDGDLTASAKLIEEM 569
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 100/198 (50%), Gaps = 2/198 (1%)
Query: 147 VRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTET 205
V+++D + +SK G + T + +++ F +G+ + A F E+ + G+ + T
Sbjct: 381 VKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMT 440
Query: 206 MNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
+LLD LC GK+E A +F +L KS + + I G CK +V++A +
Sbjct: 441 YGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLP 500
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
G P V++Y+ +I C++ + S+ LL +M+ G PN TY T++ + GD
Sbjct: 501 CKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLT 560
Query: 325 EAIRITEKMKIVGSKPDS 342
+ ++ E+MK G D+
Sbjct: 561 ASAKLIEEMKSCGFSADA 578
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 108/223 (48%), Gaps = 8/223 (3%)
Query: 106 LIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGH 164
++ R D K +FR S G ++ Y ++V + ++ L +EM S G
Sbjct: 380 MVKRVDDGMK----VFRNI-SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGV 434
Query: 165 IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARS 224
+ + T ++ G+ E A+ F++L ++ +++ +CK GKVE A +
Sbjct: 435 LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWN 494
Query: 225 VFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYC 283
+F L + PN T+ + I G CK + EA +++M+ G P +Y+T+I+++
Sbjct: 495 LFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHL 554
Query: 284 RQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
R + + +L++EM++ G + + V+ L SG+ +++
Sbjct: 555 RDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL-SGELDKS 596
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 185/382 (48%), Gaps = 13/382 (3%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQW 184
GY Y +V+ + ++D++ L+E M + + +I ++ R +
Sbjct: 276 GYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEA 335
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIF 243
E+A F E+ G+ +T L+D CK G + A F E+ S I P+ T+
Sbjct: 336 EEA---FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAI 392
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
I G+C+I + EA EM G P ++++ +I YC+ + + + + M GC
Sbjct: 393 ISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGC 452
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
PNVVTYTT++ L K GD + A + +M +G +P+ +N ++ L ++ ++EAV
Sbjct: 453 SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 512
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
+ E G+ DT T+ T++ + G +KA +L+EM + +P + TF+ L+
Sbjct: 513 LVG-EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLG-KGLQPTIVTFNVLMNG 570
Query: 424 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
G ++ +LL+ M+ K ++ + TT+ ++ C N + A ++K+M +
Sbjct: 571 FCLHGMLEDG-EKLLNWMLAK-GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVG 628
Query: 484 PRYQTC-RLILDEVKQKHMYDA 504
P +T L+ K ++M +A
Sbjct: 629 PDGKTYENLVKGHCKARNMKEA 650
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/411 (22%), Positives = 188/411 (45%), Gaps = 42/411 (10%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFS-GAGQWEDAVRTFDE 193
++++ +L + + R + E+M + G ++++++ + R S + A+ F E
Sbjct: 177 VFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFRE 236
Query: 194 LGTFGLEKNTETMNLLLDTLCKEGKVELARSVFL--ELKSCIP----------------- 234
G+ N + N+++ +C+ G+++ A + L ELK P
Sbjct: 237 FPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGE 296
Query: 235 -----------------PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYST 277
PN++ + I C+I ++ EA+ EM G P + Y+T
Sbjct: 297 LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTT 356
Query: 278 IIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVG 337
+I +C++ + + EM ++ P+V+TYT ++S + GD EA ++ +M G
Sbjct: 357 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 416
Query: 338 SKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKA 397
+PDS F LI +A +++A V+ M + G +P+ T+ T+I G + A
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHN-HMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 475
Query: 398 FHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLV 457
+L EM K+ +PN+ T++ ++ K+G +E + L L+ D TYT +
Sbjct: 476 NELLHEMWKI-GLQPNIFTYNSIVNGLCKSGNIEEAVK--LVGEFEAAGLNADTVTYTTL 532
Query: 458 IHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+ C++ + + A + KEM+G + P T ++++ M + EK+
Sbjct: 533 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL 583
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 150/324 (46%), Gaps = 11/324 (3%)
Query: 127 CPGYEHSSEIYEMMVDILGKVRQM-DQMRA---LLEEMSKGHIVTLNTIAKVMRRFSGAG 182
C G E S + +++ K M D R +++ ++VT T+ + + G
Sbjct: 414 CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK---EG 470
Query: 183 QWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFN 241
+ A E+ GL+ N T N +++ LCK G +E A + E ++ + + T+
Sbjct: 471 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 530
Query: 242 IFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ 301
+ +CK +D+AQ ++EM G G P +++++ ++ +C +LL+ M A+
Sbjct: 531 TLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK 590
Query: 302 GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
G PN T+ +++ + + A I + M G PD + + L+ +A ++EA
Sbjct: 591 GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEA 650
Query: 362 VYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLL 421
+++Q EM G + ST++ +I F +A V ++M + E + + F
Sbjct: 651 WFLFQ-EMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRR-EGLAADKEIFDFFS 708
Query: 422 KSCFKTGKTDECLSQLLDDMVNKH 445
+ +K GK + + +D+++ +
Sbjct: 709 DTKYK-GKRPDTIVDPIDEIIENY 731
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 119/244 (48%), Gaps = 4/244 (1%)
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
V SY+ +I C+ + + LL M+ +G P+V++Y+TV++ + G+ ++ ++ E
Sbjct: 246 VASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIE 305
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHH 391
MK G KP+S + +I L R ++ EA + EM G+ PDT + T+I F
Sbjct: 306 VMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFS-EMIRQGILPDTVVYTTLIDGFCKR 364
Query: 392 GHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDI 451
G A EM+ P+V T+ ++ + G E +L +M K L D
Sbjct: 365 GDIRAASKFFYEMHS-RDITPDVLTYTAIISGFCQIGDMVEA-GKLFHEMFCKG-LEPDS 421
Query: 452 TTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAV 511
T+T +I+G C+A + A+ + MI +P T ++D + ++ D+A ++
Sbjct: 422 VTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHE 481
Query: 512 MKKL 515
M K+
Sbjct: 482 MWKI 485
>gi|115446101|ref|NP_001046830.1| Os02g0470000 [Oryza sativa Japonica Group]
gi|47497415|dbj|BAD19472.1| putative PPR protein [Oryza sativa Japonica Group]
gi|47497530|dbj|BAD19582.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113536361|dbj|BAF08744.1| Os02g0470000 [Oryza sativa Japonica Group]
Length = 649
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 160/339 (47%), Gaps = 12/339 (3%)
Query: 170 TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL 229
T A +R F G + AV+ D++ +G + + L++ ++G V+ A + L
Sbjct: 227 TFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDL-LNT 285
Query: 230 KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFS 289
C PN +N + G C R ++ + EM GC P ++S +I S C+
Sbjct: 286 MLC-KPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVD 344
Query: 290 KVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
E+L++M+ GC P+ V Y +++ L++ G ++A+R+ M KPD+ FN ++
Sbjct: 345 SAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPDALGFNAVL 401
Query: 350 YTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH 409
RA R +A + +M + TFN +I M +G A V E+M +
Sbjct: 402 KGFCRAERWHDASELI-AQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRY-R 459
Query: 410 CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEW 469
C P++ T+ LL + G E QL M K DI +Y V+ GLCRA + E
Sbjct: 460 CTPDIVTYSSLLNGFSEQGLV-EVAIQLFRSMPCKP----DIFSYNAVLKGLCRAARWED 514
Query: 470 AYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
A L EM+G D P T ++++ + QK + D A ++
Sbjct: 515 AGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEV 553
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 164/333 (49%), Gaps = 13/333 (3%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFN 241
G+ DA R G N T L+D C+ G+++ A + + + P+ +T+N
Sbjct: 138 GRLADAERVLGAARATG-AANVVTYTALIDGYCRSGRLDDALRLIASMP--VAPDTYTYN 194
Query: 242 IFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ 301
+ G C + +EA+ + EM + C P ++++T I+S+C+ + +LLD+M
Sbjct: 195 TVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRY 254
Query: 302 GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA 361
GC P+VV Y+T+++ ++ G ++A+ + M KP++ +N + L A R E
Sbjct: 255 GCTPDVVIYSTLINGFSEQGHVDQALDLLNTML---CKPNTVCYNAALKGLCIAER-WED 310
Query: 362 VYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLL 421
+ EM G +P+ +TF+ +I+ + + A VLE+M K C+P+ ++ ++
Sbjct: 311 IGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKY-GCEPDTVNYNIII 369
Query: 422 KSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHD 481
S + G+ D+ L +LL+ MV K D + V+ G CRA + A L +M D
Sbjct: 370 NSLSERGRVDDAL-RLLNSMVCKP----DALGFNAVLKGFCRAERWHDASELIAQMFRDD 424
Query: 482 ITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
T +++D + Q + + A ++ M +
Sbjct: 425 CPLIEMTFNILIDMLCQNGLVNYATQVFEQMPR 457
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 150/300 (50%), Gaps = 12/300 (4%)
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFI 244
+ AV +++ +G E +T N+++++L + G+V+ A + + P+A FN +
Sbjct: 344 DSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSM--VCKPDALGFNAVL 401
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
G+C+ R +A I +M C ++++ +I C+ + ++ ++M C
Sbjct: 402 KGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCT 461
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
P++VTY+++++ ++ G E AI++ M KPD +N ++ L RA+R ++A +
Sbjct: 462 PDIVTYSSLLNGFSEQGLVEVAIQLFRSMP---CKPDIFSYNAVLKGLCRAARWEDAGEL 518
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
EM P+ TFN +I G ++A VLE+M P++ T++ L+
Sbjct: 519 I-AEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGS-TPDIFTYNALINGF 576
Query: 425 FKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
+ G+ D+ L +LL M K D +Y + GLCRA + + A L EM+ + TP
Sbjct: 577 SEQGRLDDAL-KLLSTMSCKP----DAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTP 631
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 135/292 (46%), Gaps = 15/292 (5%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G E + Y ++++ L + ++D LL M K + N V++ F A +W DA
Sbjct: 357 GCEPDTVNYNIIINSLSERGRVDDALRLLNSMVCKPDALGFNA---VLKGFCRAERWHDA 413
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS--CIPPNAHTFNIFIH 245
++ T N+L+D LC+ G V A VF ++ C P + T++ ++
Sbjct: 414 SELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTP-DIVTYSSLLN 472
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G+ + V+ A IQ + C P + SY+ +++ CR + EL+ EM + CPP
Sbjct: 473 GFSEQGLVEVA---IQLFRSMPCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPP 529
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N VT+ +++ L + G + AI + E+M GS PD +N LI R+ +A+ +
Sbjct: 530 NEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKL- 588
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTF 417
+ PD ++N+ + + A ++ EM + C PN TF
Sbjct: 589 ---LSTMSCKPDAISYNSTLKGLCRAERWQDAEELVAEMLR-NKCTPNEVTF 636
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 127/274 (46%), Gaps = 12/274 (4%)
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
NI I C R+ +A+ + + +S++T++ YCR + +L +A
Sbjct: 94 NILIKKLCATRRLADAE-RVLDALKAAAAADAVSHNTLVAGYCRDGRLADAERVLGAARA 152
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
G NVVTYT ++ +SG ++A+R+ M + PD+ +N ++ L A + +E
Sbjct: 153 TGAA-NVVTYTALIDGYCRSGRLDDALRLIASMPVA---PDTYTYNTVLKGLCIAKKWEE 208
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
A + + N P+ TF T I F +G ++A +L++M + C P+V + L
Sbjct: 209 AEELMAEMI-RNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRY-GCTPDVVIYSTL 266
Query: 421 LKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH 480
+ + G D+ L D++N + Y + GLC A + E L EM+
Sbjct: 267 INGFSEQGHVDQAL-----DLLNTMLCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRK 321
Query: 481 DITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
+P T +++ + Q ++ D+A ++ M+K
Sbjct: 322 GCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEK 355
>gi|255542424|ref|XP_002512275.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548236|gb|EEF49727.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 532
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 169/353 (47%), Gaps = 15/353 (4%)
Query: 132 HSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRT 190
H YE+++ L ++ D + ++ M S GH++ + ++ F+ AG+++ A +
Sbjct: 91 HCFSTYELLIRSLCQMGLHDLVEMVIGYMRSDGHLIDSRVLGFLVTSFAQAGKFDLAKKL 150
Query: 191 FDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCK 249
E+ ++ N LL+ L K GKV A +F E L PPN TFNI I G C+
Sbjct: 151 IIEVQGEEARISSFVYNYLLNELVKGGKVHEAIFLFKENLAFHSPPNTWTFNILIRGLCR 210
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG-CPPNVV 308
+ V++ M+ GC P V++Y+T+I C+ + +LL E+Q++ C P+V+
Sbjct: 211 VGEVEKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRACDLLKEVQSRNDCSPDVM 270
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
TYT+++S K G E A + E+M G +P FN LI G+ + A +++ +
Sbjct: 271 TYTSIISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDGFGKIGNMVAAEAMHE-K 329
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M PD TF ++I + G V + M K + PN+ T+ ++ + K
Sbjct: 330 MASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVM-KARNVSPNIYTYSVIINALCKDN 388
Query: 429 KTDEC---LSQL-LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
+ E L QL D+ K + Y VI G C+A + A ++ EM
Sbjct: 389 RIHEARDLLRQLKCSDVFPKPFI------YNPVIDGFCKAGNVDEANVIVTEM 435
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 126/270 (46%), Gaps = 6/270 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVT--LNTIAKVMRRFSGAGQWEDAVRTFDEL 194
Y ++ L K ++D+ LL+E+ + + + T ++ F G+ E A F+E+
Sbjct: 236 YNTLISGLCKANELDRACDLLKEVQSRNDCSPDVMTYTSIISGFRKLGKLEAASVLFEEM 295
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS--CIPPNAHTFNIFIHGWCKINR 252
G+E T N+L+D K G + A ++ ++ S CIP + TF I G+C+
Sbjct: 296 IRSGIEPTVVTFNVLIDGFGKIGNMVAAEAMHEKMASYSCIP-DVVTFTSLIDGYCRTGD 354
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTT 312
+ MK P + +YS II + C+ + +LL +++ P Y
Sbjct: 355 IRLGLKVWDVMKARNVSPNIYTYSVIINALCKDNRIHEARDLLRQLKCSDVFPKPFIYNP 414
Query: 313 VMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN 372
V+ K+G+ +EA I +M+ +PD F LI R+ EA+ +++ +M
Sbjct: 415 VIDGFCKAGNVDEANVIVTEMEEKRCRPDKVTFTILIIGHCMKGRMVEALDIFK-KMLAI 473
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLE 402
G APD T ++++ G +AFH+++
Sbjct: 474 GCAPDNITISSLVACLLKAGKPSEAFHIVQ 503
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 133/268 (49%), Gaps = 6/268 (2%)
Query: 170 TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL 229
T ++R G+ E F+ + +FG + T N L+ LCK +++ A + E+
Sbjct: 200 TFNILIRGLCRVGEVEKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRACDLLKEV 259
Query: 230 KS---CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQY 286
+S C P+ T+ I G+ K+ +++ A +EM G P V++++ +I + +
Sbjct: 260 QSRNDC-SPDVMTYTSIISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDGFGKIG 318
Query: 287 NFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFN 346
N + ++M + C P+VVT+T+++ ++GD +++ + MK P+ ++
Sbjct: 319 NMVAAEAMHEKMASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKARNVSPNIYTYS 378
Query: 347 CLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNK 406
+I L + +R+ EA + + ++ + V P +N +I F G+ ++A ++ EM +
Sbjct: 379 VIINALCKDNRIHEARDLLR-QLKCSDVFPKPFIYNPVIDGFCKAGNVDEANVIVTEMEE 437
Query: 407 LEHCKPNVQTFHPLLKSCFKTGKTDECL 434
+ C+P+ TF L+ G+ E L
Sbjct: 438 -KRCRPDKVTFTILIIGHCMKGRMVEAL 464
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 134/304 (44%), Gaps = 5/304 (1%)
Query: 205 TMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
T LL+ +LC+ G +L V ++S ++ + + + + D A+ I E+
Sbjct: 95 TYELLIRSLCQMGLHDLVEMVIGYMRSDGHLIDSRVLGFLVTSFAQAGKFDLAKKLIIEV 154
Query: 264 KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF 323
+G Y+ ++ + + L E A PPN T+ ++ L + G+
Sbjct: 155 QGEEARISSFVYNYLLNELVKGGKVHEAIFLFKENLAFHSPPNTWTFNILIRGLCRVGEV 214
Query: 324 EEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNT 383
E+ + M+ G PD +N LI L +A+ + A + + N +PD T+ +
Sbjct: 215 EKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRACDLLKEVQSRNDCSPDVMTYTS 274
Query: 384 MITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVN 443
+I+ F G E A + EEM + +P V TF+ L+ K G + ++ + + +
Sbjct: 275 IISGFRKLGKLEAASVLFEEMIR-SGIEPTVVTFNVLIDGFGKIG--NMVAAEAMHEKMA 331
Query: 444 KHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMY 502
+ D+ T+T +I G CR ++ M +++P T +I++ + K ++
Sbjct: 332 SYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKARNVSPNIYTYSVIINALCKDNRIH 391
Query: 503 DAAE 506
+A +
Sbjct: 392 EARD 395
>gi|224111048|ref|XP_002315730.1| predicted protein [Populus trichocarpa]
gi|222864770|gb|EEF01901.1| predicted protein [Populus trichocarpa]
Length = 760
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 190/390 (48%), Gaps = 15/390 (3%)
Query: 100 HYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRAL-LE 158
H LV ++H + AL FRW +H E + ++ ILG+ ++ R + LE
Sbjct: 115 HSLVYNVLHGARKP-DHALQFFRWVERAGLIQHDRETHMKIIQILGRYSMLNHARCIVLE 173
Query: 159 EM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEG 217
+M KG + + ++ + AG +++V+ F ++ G+E++ ++ N L + ++G
Sbjct: 174 DMPKKGFELDEDMFVLLIDSYGKAGIVQESVKMFSKMKELGVERSVKSYNALFKVIVRKG 233
Query: 218 KVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYS 276
+ +A+ F + L I P HT+N+ I G+ R+ A ++MK G P V++Y+
Sbjct: 234 RYMMAKRFFNKMLDEGIGPTRHTYNVLIWGFFLSMRLRTAVRFYEDMKVRGISPDVVTYN 293
Query: 277 TIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIV 336
T+I Y R + +L EM+A+ P V++YTT++ + +R+ E+MK V
Sbjct: 294 TMINGYYRHKRMEEAEKLFAEMKAKDIAPTVISYTTMIKGYFAVDRINDGLRLLEEMKSV 353
Query: 337 GSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP-DTSTFNTMITMFSHHGHHE 395
G KP++ + L+ L A ++ EA + + EM +AP D S F ++ G +
Sbjct: 354 GIKPNNVTYTTLLPDLCDAGKMTEAKDILK-EMVRRRIAPKDNSIFLKLLNSQCKAGDLK 412
Query: 396 KAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVN-------KHHLS 448
A VL+ M KL + L+++ K + D+ + + +D ++ + L
Sbjct: 413 AAVDVLDGMIKLS-IPSEAGHYGVLIENFCKAEEYDQAV-KFVDKLIENDIILRPQSTLE 470
Query: 449 LDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
++ Y VI LC + A +LF++++
Sbjct: 471 MESGAYNPVIQYLCSHGQTGKAEILFRQLL 500
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 132/348 (37%), Gaps = 21/348 (6%)
Query: 142 DILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL------- 194
D+ V +D M L GH L + F A +++ AV+ D+L
Sbjct: 410 DLKAAVDVLDGMIKLSIPSEAGHYGVL------IENFCKAEEYDQAVKFVDKLIENDIIL 463
Query: 195 -GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRV 253
LE + N ++ LC G+ A +F +L + FN I G K
Sbjct: 464 RPQSTLEMESGAYNPVIQYLCSHGQTGKAEILFRQLLKKGVEDPLAFNNLICGHAKEGTP 523
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
D A ++ M G +Y +I+SY R+ + LD M G P+ + +V
Sbjct: 524 DSAFEILKIMGRKGIPRDADAYRLLIESYLRKGEPADAKTALDSMIEDGHLPDSSVFRSV 583
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
M L + G + A R+ + M G K + ++ L +EA+ + M
Sbjct: 584 MESLYEDGRVQTASRVMKSMVEKGVKENMDLVAKILEALLMRGHEEEALGRIDLLMSSQC 643
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
F++++++ S G A +L + C + +++ +L + GKT
Sbjct: 644 ----NVNFDSLLSILSEKGKTIAALKLL-DFGLQRDCDIDFKSYDKVLDALLAAGKTLNA 698
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHD 481
S L M S +Y +I L + + A +L + + G D
Sbjct: 699 YSILCKIMEKGGVTSW--RSYEDLIKSLNQEGNTKQADILSRMIKGDD 744
>gi|125542844|gb|EAY88983.1| hypothetical protein OsI_10467 [Oryza sativa Indica Group]
Length = 525
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 164/342 (47%), Gaps = 13/342 (3%)
Query: 143 ILGKVRQMDQMRALLEEMSK--GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTF--- 197
+LG+ R+ M LL + VT T V+ R + + V +F L
Sbjct: 113 VLGRARRFAHMWDLLRSSRRLVPDAVTPRTAMVVLGRVAKVCSVRETVDSFRRLSRMLRG 172
Query: 198 -GLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEA 256
G ++ + N LL TLC+E + AR+V+ LK N TFNI + GW ++A
Sbjct: 173 RGDDQEGQLFNALLRTLCQEKSMSDARNVYHALKYEFKVNRQTFNILLSGW---KSAEDA 229
Query: 257 QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSY 316
+ + EM+ G P +++Y+++I +C+ Y+LLDEM+ + P+V+TYT+++
Sbjct: 230 EAFVAEMRELGVEPDLVTYNSLIDCHCKNRGVENAYKLLDEMREKDISPDVITYTSLIGG 289
Query: 317 LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
L G ++A + ++M +G PD +N I A R+ +A + + EM G+ P
Sbjct: 290 LGLIGQPDKAKHLLKEMHELGCYPDVPAYNTAIRNFVIAKRLGDAFALME-EMASKGLMP 348
Query: 377 DTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQ 436
+ +T+N + A+ + E M + E C PN Q+ +++ C + G+ + L +
Sbjct: 349 NATTYNLFFRCYYWAYDIGSAWQLYERM-RSEGCFPNTQSCMFIVRLCHRHGRVAQAL-E 406
Query: 437 LLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
L DMVN S + + L LC K + A F +MI
Sbjct: 407 LWSDMVNNGFGSFTLVSDVL-FDLLCDEGKLDEAERCFHQMI 447
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 102/252 (40%), Gaps = 4/252 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVT-LNTIAKVMRRFSGAGQWEDA 187
G E Y ++D K R ++ LL+EM + I + T ++ GQ + A
Sbjct: 240 GVEPDLVTYNSLIDCHCKNRGVENAYKLLDEMREKDISPDVITYTSLIGGLGLIGQPDKA 299
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHG 246
E+ G + N + ++ A ++ E+ S + PNA T+N+F
Sbjct: 300 KHLLKEMHELGCYPDVPAYNTAIRNFVIAKRLGDAFALMEEMASKGLMPNATTYNLFFRC 359
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
+ + A + M+ GC P S I++ R ++ EL +M G
Sbjct: 360 YYWAYDIGSAWQLYERMRSEGCFPNTQSCMFIVRLCHRHGRVAQALELWSDMVNNGFGSF 419
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
+ + L G +EA R +M +G KP + F + + A+R +E++
Sbjct: 420 TLVSDVLFDLLCDEGKLDEAERCFHQMIELGQKPSNVAFRRIKILMQLANR-EESIARLT 478
Query: 367 VEMPENG-VAPD 377
+M + G +AP+
Sbjct: 479 AQMAQFGRLAPE 490
>gi|224137884|ref|XP_002326464.1| predicted protein [Populus trichocarpa]
gi|222833786|gb|EEE72263.1| predicted protein [Populus trichocarpa]
Length = 476
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 116/484 (23%), Positives = 208/484 (42%), Gaps = 85/484 (17%)
Query: 62 PRLPDIDVI-ISKVHVGSSEDEVFQSLKQD--HVCNAIQPSHY---LVNKLIHRFK-DDW 114
P+ P I + + +G D Q+ + N++ P VN +IHR+ ++
Sbjct: 16 PKTPKISTLHFATTSLGEKLDAHLQNSPNNVEKTLNSLAPIKLDTKYVNDIIHRWSLNNL 75
Query: 115 KSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGH--IVTLNTIA 172
+ L F WAG P Y H+ IY + K++Q Q+ L E K +V ++T
Sbjct: 76 QLGLRFFIWAGDQPNYRHNLYIYNKACSLF-KIKQNPQVILDLIETYKLEKCVVCVDTFK 134
Query: 173 KVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC 232
V+R G ++A+ ++ F + +T N+++ +LC++G V++A+ + E+
Sbjct: 135 VVLRLCKAGGLADEALMVLKKMPEFNIRPDTTAYNVVIRSLCEKGDVDMAKKLMGEMGLI 194
Query: 233 -IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKV 291
+ P+ T+ I G+C + R++EA M HGC+P V++YS ++ CR +
Sbjct: 195 DLYPDMITYVSMIKGFCDVGRLEEAFALFPVMSVHGCYPNVVAYSALLDGICRFGIVERA 254
Query: 292 YELLDEM--QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPD-------- 341
+ELL EM Q +GC PNV+TYT+V+ + G ++A+ + E M++ G P+
Sbjct: 255 FELLAEMEKQGEGCCPNVITYTSVIQSFCEQGRTKDALSVLELMEVRGCAPNRVTASAWI 314
Query: 342 ---------------------------SRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
++ L+ L + +V+EA ++ + +G+
Sbjct: 315 NGICTNGQLQDVYNFIERIVAGGSVSIGDCYSSLVVCLIKIKKVEEAEKTFRRAL-SSGM 373
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
PD+ + MI F + EE+ KTG CL
Sbjct: 374 KPDSLACSMMIREICSEKRVLDGFCLYEEVE--------------------KTG----CL 409
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
S S+DI Y++++ GLC+ A L + M+ I R I++
Sbjct: 410 S------------SIDIDIYSILLAGLCQQGHSAEAARLARSMLEKRIPLRAPHVEKIVE 457
Query: 495 EVKQ 498
+K
Sbjct: 458 HLKN 461
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 95/224 (42%), Gaps = 6/224 (2%)
Query: 291 VYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIY 350
+ +L++ + + C V T+ V+ G +EA+ + +KM +PD+ +N +I
Sbjct: 114 ILDLIETYKLEKCVVCVDTFKVVLRLCKAGGLADEALMVLKKMPEFNIRPDTTAYNVVIR 173
Query: 351 TLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHC 410
+L V A + EM + PD T+ +MI F G E+AF + M+ + C
Sbjct: 174 SLCEKGDVDMAKKLMG-EMGLIDLYPDMITYVSMIKGFCDVGRLEEAFALFPVMS-VHGC 231
Query: 411 KPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWA 470
PNV + LL + G + L + ++ TYT VI C + + A
Sbjct: 232 YPNVVAYSALLDGICRFGIVERAFELLAEMEKQGEGCCPNVITYTSVIQSFCEQGRTKDA 291
Query: 471 YLLFKEMIGHDITPRYQTCRLILDEV----KQKHMYDAAEKIEA 510
+ + M P T ++ + + + +Y+ E+I A
Sbjct: 292 LSVLELMEVRGCAPNRVTASAWINGICTNGQLQDVYNFIERIVA 335
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 65/135 (48%), Gaps = 3/135 (2%)
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLD 439
TF ++ + G ++A VL++M + + +P+ ++ +++S + G D +++ L
Sbjct: 132 TFKVVLRLCKAGGLADEALMVLKKMPEF-NIRPDTTAYNVVIRSLCEKGDVD--MAKKLM 188
Query: 440 DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQK 499
+ L D+ TY +I G C + E A+ LF M H P +LD + +
Sbjct: 189 GEMGLIDLYPDMITYVSMIKGFCDVGRLEEAFALFPVMSVHGCYPNVVAYSALLDGICRF 248
Query: 500 HMYDAAEKIEAVMKK 514
+ + A ++ A M+K
Sbjct: 249 GIVERAFELLAEMEK 263
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 177/383 (46%), Gaps = 45/383 (11%)
Query: 151 DQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD---ELGTFGLEKNTETMN 207
D AL +EM + L ++ R FS + + D +L G+ N T+N
Sbjct: 70 DDAIALFQEMIRSR--PLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 208 LLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
++++ C+ K A SV + +K P+ TFN I G +V EA + M +
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
GC P V++Y++I+ CR + S +LL +M+ + +V TY+T++ L + G + A
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247
Query: 327 IRITEKMKIVGSK-----------------------------------PDSRFFNCLIYT 351
I + ++M+ G K P+ FN L+
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307
Query: 352 LGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCK 411
+ ++QEA +Y+ EM G++P+ T+NT++ + +A ++L+ M + C
Sbjct: 308 FVKEGKLQEANELYK-EMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR-NKCS 365
Query: 412 PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAY 471
P++ TF L+K + D+ + + ++K L + TY++++ G C++ K + A
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRN--ISKRGLVANAVTYSILVQGFCQSGKIKLAE 423
Query: 472 LLFKEMIGHDITPRYQTCRLILD 494
LF+EM+ H + P T ++LD
Sbjct: 424 ELFQEMVSHGVLPDVMTYGILLD 446
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/438 (24%), Positives = 199/438 (45%), Gaps = 24/438 (5%)
Query: 62 PRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIF 121
P L D S + + V KQ + N I + Y +N +I+ F K+ +
Sbjct: 86 PSLVDFSRFFSAIARTKQFNLVLDFCKQLEL-NGIAHNIYTLNIMINCFCRCCKTCFA-Y 143
Query: 122 RWAGSCP--GYEHSSEIYEMMVDIL---GKVRQ----MDQMRALLEEMSKGHIVTLNTIA 172
G GYE + + ++ L GKV + +D+M +E + +VT N+I
Sbjct: 144 SVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM---VENGCQPDVVTYNSIV 200
Query: 173 KVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS- 231
+ R D +R +E ++ + T + ++D+LC++G ++ A S+F E+++
Sbjct: 201 NGICRSGDTSLALDLLRKMEERN---VKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK 257
Query: 232 CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKV 291
I + T+N + G CK + ++ +++M P VI+++ ++ + ++ +
Sbjct: 258 GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 317
Query: 292 YELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYT 351
EL EM +G PN++TY T+M EA + + M PD F LI
Sbjct: 318 NELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG 377
Query: 352 LGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH-C 410
RV + + V++ + + G+ + T++ ++ F G + A + +EM + H
Sbjct: 378 YCMVKRVDDGMKVFR-NISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM--VSHGV 434
Query: 411 KPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWA 470
P+V T+ LL GK ++ L ++ +D+ K + L I YT +I G+C+ K E A
Sbjct: 435 LPDVMTYGILLDGLCDNGKLEKAL-EIFEDL-QKSKMDLGIVMYTTIIEGMCKGGKVEDA 492
Query: 471 YLLFKEMIGHDITPRYQT 488
+ LF + + P T
Sbjct: 493 WNLFCSLPCKGVKPNVMT 510
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 160/329 (48%), Gaps = 8/329 (2%)
Query: 150 MDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLL 209
+D +R + E K + T +TI + R G + A+ F E+ T G++ + T N L
Sbjct: 213 LDLLRKMEERNVKADVFTYSTIIDSLCR---DGCIDAAISLFKEMETKGIKSSVVTYNSL 269
Query: 210 LDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGC 268
+ LCK GK + ++ S I PN TFN+ + + K ++ EA +EM G
Sbjct: 270 VRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGI 329
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
P +I+Y+T++ YC Q S+ +LD M C P++VT+T+++ ++ ++
Sbjct: 330 SPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMK 389
Query: 329 ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF 388
+ + G ++ ++ L+ ++ +++ A ++Q EM +GV PD T+ ++
Sbjct: 390 VFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ-EMVSHGVLPDVMTYGILLDGL 448
Query: 389 SHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
+G EKA + E++ K + + +++ K GK ++ + + +
Sbjct: 449 CDNGKLEKALEIFEDLQK-SKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCS--LPCKGVK 505
Query: 449 LDITTYTLVIHGLCRANKCEWAYLLFKEM 477
++ TYT++I GLC+ A +L ++M
Sbjct: 506 PNVMTYTVMISGLCKKGSLSEANILLRKM 534
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 141/329 (42%), Gaps = 45/329 (13%)
Query: 116 SALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIV----TLNTI 171
+A+ +F+ + G + S Y +V L K + + LL++M IV T N +
Sbjct: 246 AAISLFKEMET-KGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304
Query: 172 AKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LEL 229
V F G+ ++A + E+ T G+ N T N L+D C + ++ A ++ +
Sbjct: 305 LDV---FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR 361
Query: 230 KSCIP----------------------------------PNAHTFNIFIHGWCKINRVDE 255
C P NA T++I + G+C+ ++
Sbjct: 362 NKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKL 421
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
A+ QEM HG P V++Y ++ C K E+ +++Q +V YTT++
Sbjct: 422 AEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIE 481
Query: 316 YLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVA 375
+ K G E+A + + G KP+ + +I L + + EA + + +M E+G A
Sbjct: 482 GMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLR-KMEEDGNA 540
Query: 376 PDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
P+ T+NT+I G + ++EEM
Sbjct: 541 PNDCTYNTLIRAHLRDGDLTASAKLIEEM 569
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 100/198 (50%), Gaps = 2/198 (1%)
Query: 147 VRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTET 205
V+++D + +SK G + T + +++ F +G+ + A F E+ + G+ + T
Sbjct: 381 VKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMT 440
Query: 206 MNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
+LLD LC GK+E A +F +L KS + + I G CK +V++A +
Sbjct: 441 YGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLP 500
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
G P V++Y+ +I C++ + S+ LL +M+ G PN TY T++ + GD
Sbjct: 501 CKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLT 560
Query: 325 EAIRITEKMKIVGSKPDS 342
+ ++ E+MK G D+
Sbjct: 561 ASAKLIEEMKSCGFSADA 578
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 102/214 (47%), Gaps = 7/214 (3%)
Query: 106 LIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGH 164
++ R D K +FR S G ++ Y ++V + ++ L +EM S G
Sbjct: 380 MVKRVDDGMK----VFRNI-SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGV 434
Query: 165 IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARS 224
+ + T ++ G+ E A+ F++L ++ +++ +CK GKVE A +
Sbjct: 435 LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWN 494
Query: 225 VFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYC 283
+F L + PN T+ + I G CK + EA +++M+ G P +Y+T+I+++
Sbjct: 495 LFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHL 554
Query: 284 RQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
R + + +L++EM++ G + + V+ L
Sbjct: 555 RDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 188/375 (50%), Gaps = 10/375 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQW-EDAVRTFDEL 194
+++ +L ++ + + R LL+++ S G +VT+++ + R + + E A++ F E
Sbjct: 193 FDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVFCE- 251
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRV 253
+G+ NT + N+++ +LC+ GKV+ A + +++ P+ +++ I G+C + +
Sbjct: 252 --YGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGEL 309
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
+A + +M+ G P +Y++II C+ + ++L EM +Q P+ V YTT+
Sbjct: 310 KKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTL 369
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
+ K G A + ++M PD + LI G+ +V E ++ EM G
Sbjct: 370 IHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFH-EMISRG 428
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
+ PD T+ T+I ++ G AF + EM ++ PN+ T+ L+ K G+ D
Sbjct: 429 LKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQM-GMTPNIVTYGALIDGLCKHGELDTA 487
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
++LLD+M K L L++ Y +++G+C+A E A L KEM I P T ++
Sbjct: 488 -NELLDEM-RKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVI 545
Query: 494 DEVKQKHMYDAAEKI 508
D + D A K+
Sbjct: 546 DAYCRLGDIDKAHKL 560
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 183/385 (47%), Gaps = 9/385 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTI-AKVMRRFSGAGQWEDA 187
G + + Y ++ +L K+ + + +L EM I+ N + ++ F G A
Sbjct: 323 GLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTA 382
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHG 246
+ FDE+ + + + T L+ + GKV +++F E+ S + P+ T+ I
Sbjct: 383 NKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDV 442
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
+CK + A EM G P +++Y +I C+ ELLDEM+ +G N
Sbjct: 443 YCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLN 502
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
V Y ++++ + K+G+ E+AI++ ++M++ G PD+ + +I R + +A + Q
Sbjct: 503 VCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQ 562
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS-CF 425
EM + G+ P TFN ++ F G E +L M + + P+ T++ L+K C
Sbjct: 563 -EMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLE-KGIVPDAITYNTLMKQHCI 620
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
+ +++ M N+ ++ D TY ++I G C+A + A+ L+KEMI P
Sbjct: 621 RNSMNTT--TKIYKRMRNQG-VAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPT 677
Query: 486 YQTCRLILDEV-KQKHMYDAAEKIE 509
+ ++ K+K + +A E E
Sbjct: 678 VTSYNALIKRFYKKKKILEARELFE 702
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 120/507 (23%), Positives = 217/507 (42%), Gaps = 67/507 (13%)
Query: 2 ICHLQKYLKQARIPLNPLTSRIRFHSSSENCSHIVSSSPIESYCSDG------ARLDHHQ 55
+C L K + R L ++ F SS+ + + S+ I+ YC G +D Q
Sbjct: 268 LCRLGKVKEAHR-----LLMQMDFRSSTPDV--VSYSTVIDGYCHLGELKKALKLMDDMQ 320
Query: 56 VLCVDSPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWK 115
+ + R +I+ +G S + + + ++ + I P + + LIH F
Sbjct: 321 IKGLKPNRYTYNSIILLLCKIGKSFEA--EKVLREMMSQKIIPDNVVYTTLIHGF----- 373
Query: 116 SALGIFRWAGSCPGYEHSSEI------YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTL 168
LG R A S +I Y ++ G+ ++ + + L EM S+G
Sbjct: 374 FKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDE 433
Query: 169 NTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE 228
T ++ + AG+ +A +E+ G+ N T L+D LCK G+++ A + E
Sbjct: 434 VTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDE 493
Query: 229 L-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYN 287
+ K + N +N ++G CK +++A ++EM+ G P I+Y+T+I +YCR +
Sbjct: 494 MRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGD 553
Query: 288 FSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNC 347
K ++LL EM +G P VVT+ +M+ G E+ R+ M G PD+ +N
Sbjct: 554 IDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNT 613
Query: 348 LIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKL 407
L+ + + +Y+ M GVAPD++T+N +I + ++A+ + +EM +
Sbjct: 614 LMKQHCIRNSMNTTTKIYK-RMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEK 672
Query: 408 EHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKC 467
+ P V +++ L+K +K K E
Sbjct: 673 GYV-PTVTSYNALIKRFYKKKKILE----------------------------------- 696
Query: 468 EWAYLLFKEMIGHDITPRYQTCRLILD 494
A LF+EM GH + + +D
Sbjct: 697 --ARELFEEMRGHGLVADGEIYNFFVD 721
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 150/318 (47%), Gaps = 5/318 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
G + Y ++D+ K +M +L EM + G + T ++ G+ + A
Sbjct: 428 GLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTA 487
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHG 246
DE+ GL+ N N +++ +CK G +E A + E++ + I P+A T+ I
Sbjct: 488 NELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDA 547
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
+C++ +D+A +QEM G P V++++ ++ +C LL M +G P+
Sbjct: 548 YCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPD 607
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
+TY T+M +I ++M+ G PDS +N LI +A ++EA ++Y+
Sbjct: 608 AITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYK 667
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
EM E G P +++N +I F +A + EEM + + + ++ + C++
Sbjct: 668 -EMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEM-RGHGLVADGEIYNFFVDMCYE 725
Query: 427 TGKTDECLSQLLDDMVNK 444
G + L+ L D+ + K
Sbjct: 726 EGDVEITLN-LCDEAIEK 742
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 145/334 (43%), Gaps = 42/334 (12%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGK-VELARSVFLELKSCIPPNAHTF 240
G +A + D+L ++GL ++ N L + + +E+A VF E
Sbjct: 204 GHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVFCE------------ 251
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
+G SY+ II S CR + + LL +M
Sbjct: 252 -------------------------YGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDF 286
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
+ P+VV+Y+TV+ G+ ++A+++ + M+I G KP+ +N +I L + + E
Sbjct: 287 RSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFE 346
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
A V + EM + PD + T+I F GH A +EM + P+ T+ L
Sbjct: 347 AEKVLR-EMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLS-KKISPDYITYTTL 404
Query: 421 LKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH 480
++ + GK E L +M+++ L D TYT +I C+A + A+ L EM+
Sbjct: 405 IQGFGQGGKVIEP-QNLFHEMISRG-LKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQM 462
Query: 481 DITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
+TP T ++D + + D A ++ M+K
Sbjct: 463 GMTPNIVTYGALIDGLCKHGELDTANELLDEMRK 496
>gi|298204688|emb|CBI25186.3| unnamed protein product [Vitis vinifera]
Length = 548
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 106/431 (24%), Positives = 196/431 (45%), Gaps = 19/431 (4%)
Query: 70 IISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWA--GSC 127
++ ++ SSE EV L + ++P+ LV I ++DW+ A +F W C
Sbjct: 85 LLKRLEGLSSEAEVMAVLDG----SGVEPNQELVYWAIWGLREDWRLAYWVFNWGEKWGC 140
Query: 128 PGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDA 187
+S +++ ILG ++ L+ E+ + + T + ++ R++ A A
Sbjct: 141 ----NSERTRGLVIWILGNCKKFGVAWCLIRELHRSSVDTRRAMLIMIDRYTAANDPCKA 196
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGW 247
++TF + F L + E LL LCK G VE A + + K P FNI ++GW
Sbjct: 197 IKTFHIMEKFRLSPDQEAFYTLLTALCKHGNVEDAEELMFQNKKLFPLETEGFNIILNGW 256
Query: 248 CKIN-RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
++ + EA+ +EM P +Y+ +I + + N L D+M+ +G P
Sbjct: 257 SNVSLDIFEAKRIWREMSKCCIVPNATTYTLMISCFSKFGNLFDSLRLFDDMKKRGWIPG 316
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
+ Y +++ L EA++I K+K +G + DS +NC+I L +A +++EA +
Sbjct: 317 LEVYNSLIYVLTHENCLTEALKILGKIKEMGLQLDSASYNCMIRPLCKAKKLEEARTILA 376
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
+ EN + P T T++ F +E+ F VL+ + + PN TF +L + FK
Sbjct: 377 AMIGEN-LGPTTETYHA----FLEGASYEETFEVLKNL-RTAGFGPNGDTFLLILDNLFK 430
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
+ + L ++ + + + Y ++I GL + A L+ EM
Sbjct: 431 LDQPENALKIWVE--MKQFDVVPGSEHYKVLIEGLTKFGWLVKARELYAEMRSKGFLDDP 488
Query: 487 QTCRLILDEVK 497
+ +L+ D V+
Sbjct: 489 KLKKLLKDPVE 499
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 115/269 (42%), Gaps = 22/269 (8%)
Query: 258 WTIQEMKGHGCHPCVI------------SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
W + K G C+I + +I Y + K + M+ P
Sbjct: 151 WILGNCKKFGVAWCLIRELHRSSVDTRRAMLIMIDRYTAANDPCKAIKTFHIMEKFRLSP 210
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRAS-RVQEAVYV 364
+ + T+++ L K G+ E+A + + K + ++ FN ++ S + EA +
Sbjct: 211 DQEAFYTLLTALCKHGNVEDAEELMFQNKKLFPL-ETEGFNIILNGWSNVSLDIFEAKRI 269
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
++ EM + + P+ +T+ MI+ FS G+ + + ++M K P ++ ++ L+
Sbjct: 270 WR-EMSKCCIVPNATTYTLMISCFSKFGNLFDSLRLFDDMKK-RGWIPGLEVYNSLIYVL 327
Query: 425 FKTGKTDECLSQLLDDM--VNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
+ CL++ L + + + L LD +Y +I LC+A K E A + MIG ++
Sbjct: 328 ----THENCLTEALKILGKIKEMGLQLDSASYNCMIRPLCKAKKLEEARTILAAMIGENL 383
Query: 483 TPRYQTCRLILDEVKQKHMYDAAEKIEAV 511
P +T L+ + ++ + +
Sbjct: 384 GPTTETYHAFLEGASYEETFEVLKNLRTA 412
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 177/352 (50%), Gaps = 12/352 (3%)
Query: 131 EHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKG---HIVTLNTIAKVMRRFSGAGQWED 186
E IY ++D L + ++ L EM +KG ++VT N++ + + + G+W D
Sbjct: 236 EADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY---GRWSD 292
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIH 245
A R ++ + N T + L+D KEGK+ A ++ E+ K I P+ T++ I+
Sbjct: 293 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 352
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G+C +R+DEA+ + M C P V++Y+T+I+ +C+ + EL EM +G
Sbjct: 353 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG 412
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N VTY T++ L ++GD + A +I +KM G PD ++ L+ L + ++++A+ V+
Sbjct: 413 NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVF 472
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
+ + ++ + PD T+N MI G E + + ++ L+ KPNV + ++
Sbjct: 473 EY-LQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS-LKGVKPNVIIYTTMISGFC 530
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
+ G +E L +M L T TL+ L +K A L+ KEM
Sbjct: 531 RKGLKEEA-DALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELI-KEM 580
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 177/361 (49%), Gaps = 8/361 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++++ + Q+ A+L +M K G+ + T++ ++ + + +AV D++
Sbjct: 102 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 161
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKINRV 253
+ NT T N L+ L K A ++ + + C P+ T+ ++G CK +
Sbjct: 162 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGC-QPDLFTYGTVVNGLCKRGDI 220
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
D A +++M+ V+ Y+TII + C N + L EM +G PNVVTY ++
Sbjct: 221 DLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 280
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
+ L G + +A R+ M P+ F+ LI + ++ EA +Y EM +
Sbjct: 281 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD-EMIKRS 339
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
+ PD T++++I F H ++A H+ E M + C PNV T++ L+K K + +E
Sbjct: 340 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS-KDCFPNVVTYNTLIKGFCKAKRVEEG 398
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
+ +L +M ++ L + TY +I GL +A C+ A +FK+M+ + P T ++L
Sbjct: 399 M-ELFREM-SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL 456
Query: 494 D 494
D
Sbjct: 457 D 457
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 160/332 (48%), Gaps = 6/332 (1%)
Query: 155 ALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTL 213
AL++ M ++G L T V+ G + A+ ++ +E + ++D L
Sbjct: 190 ALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDAL 249
Query: 214 CKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCV 272
C V A ++F E+ + I PN T+N I C R +A + +M +P V
Sbjct: 250 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 309
Query: 273 ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEK 332
+++S +I ++ ++ + +L DEM + P++ TY+++++ +EA + E
Sbjct: 310 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 369
Query: 333 MKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
M P+ +N LI +A RV+E + +++ EM + G+ +T T+NT+I G
Sbjct: 370 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR-EMSQRGLVGNTVTYNTLIQGLFQAG 428
Query: 393 HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
+ A + ++M + P++ T+ LL K GK ++ L ++ + + K + DI
Sbjct: 429 DCDMAQKIFKKMVS-DGVPPDIITYSILLDGLCKYGKLEKAL--VVFEYLQKSKMEPDIY 485
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
TY ++I G+C+A K E + LF + + P
Sbjct: 486 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 517
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 114/221 (51%), Gaps = 8/221 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK----GHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++ K +++++ L EMS+ G+ VT NT+ + + + AG + A + F
Sbjct: 382 YNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ---AGDCDMAQKIFK 438
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKIN 251
++ + G+ + T ++LLD LCK GK+E A VF L KS + P+ +T+NI I G CK
Sbjct: 439 KMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAG 498
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
+V++ + G P VI Y+T+I +CR+ + L EM+ G PN TY
Sbjct: 499 KVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYN 558
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
T++ + GD + + ++M+ G D+ + +I L
Sbjct: 559 TLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 599
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 102/237 (43%), Gaps = 4/237 (1%)
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
++D+A EM P ++ ++ ++ + + F V L + MQ ++ +Y
Sbjct: 44 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 103
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
+++ + A+ + KM +G +PD + L+ R+ EAV + +M
Sbjct: 104 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVD-QMFV 162
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
P+T TFNT+I H +A +++ M C+P++ T+ ++ K G D
Sbjct: 163 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVA-RGCQPDLFTYGTVVNGLCKRGDID 221
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
LS LL M K + D+ YT +I LC A LF EM I P T
Sbjct: 222 LALS-LLKKM-EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 276
>gi|356508608|ref|XP_003523047.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Glycine max]
Length = 879
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 160/329 (48%), Gaps = 11/329 (3%)
Query: 101 YLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM 160
Y N+++ + +D A+G F W PG+ H Y MV ILG+ R+ + LLE+M
Sbjct: 351 YQANQILKQLQDH-SVAVGFFCWLKRQPGFWHDGHTYTTMVGILGRAREFGAINKLLEQM 409
Query: 161 SKG----HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKE 216
K ++VT N +++ + A +A+ F+++ G E + T L+D K
Sbjct: 410 VKDGCQPNVVTYN---RLIHSYGRANYLREALNVFNQMQEMGCEPDRVTYCTLIDIHAKA 466
Query: 217 GKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISY 275
G +++A S++ ++ + P+ T+++ I+ K + A EM GC P +++Y
Sbjct: 467 GFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQGCVPNIVTY 526
Query: 276 STIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKI 335
+ +I + N+ EL +MQ G P+ VTY+ VM L G EEA + +M+
Sbjct: 527 NILIALQAKARNYQTALELYRDMQNAGFKPDKVTYSIVMEVLGHCGYLEEAEAVFFEMRQ 586
Query: 336 VGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHE 395
PD + L+ G+A V++A Y M G+ P+ T N++++ F
Sbjct: 587 NHWVPDEPVYGLLVDLWGKAGNVEKAWEWYHT-MLRAGLLPNVPTCNSLLSAFLRVHRLP 645
Query: 396 KAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
A+++L+ M L P++QT+ LL C
Sbjct: 646 DAYNLLQNMVTLG-LNPSLQTYTLLLSCC 673
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 161/362 (44%), Gaps = 17/362 (4%)
Query: 152 QMRALLEEMSKGHIVTLNTIAKVM---RRFSGAGQWEDAVRTFDELGTFG--LEKNTETM 206
QM +E H LN A ++ R F+ +G + V+ + +G EK +
Sbjct: 285 QMAGPFKESFNKHTRDLNMPAGIVPTKRHFTNSGHVVEVVKDILKQLRWGPATEKTLYNL 344
Query: 207 NLLLDTL--------CKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQW 258
N +D ++ V + +L+ + + HT+ + +
Sbjct: 345 NFSIDAYQANQILKQLQDHSVAVGFFCWLKRQPGFWHDGHTYTTMVGILGRAREFGAINK 404
Query: 259 TIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLA 318
+++M GC P V++Y+ +I SY R + + ++MQ GC P+ VTY T++ A
Sbjct: 405 LLEQMVKDGCQPNVVTYNRLIHSYGRANYLREALNVFNQMQEMGCEPDRVTYCTLIDIHA 464
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDT 378
K+G + A+ + E+M+ VG PD+ ++ +I LG++ + A ++ EM + G P+
Sbjct: 465 KAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGNLSAAHRLF-CEMVDQGCVPNI 523
Query: 379 STFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLL 438
T+N +I + + +++ A + +M KP+ T+ +++ G +E +
Sbjct: 524 VTYNILIALQAKARNYQTALELYRDMQNAGF-KPDKVTYSIVMEVLGHCGYLEEAEAVFF 582
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQ 498
+ + ++H D Y L++ +A E A+ + M+ + P TC +L +
Sbjct: 583 E--MRQNHWVPDEPVYGLLVDLWGKAGNVEKAWEWYHTMLRAGLLPNVPTCNSLLSAFLR 640
Query: 499 KH 500
H
Sbjct: 641 VH 642
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 39/197 (19%)
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
TYTT++ L ++ +F ++ E+M G +P+ +N LI++ GRA+ ++EA+ V+ +
Sbjct: 385 TYTTMVGILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLIHSYGRANYLREALNVFN-Q 443
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M E G PD T+ T+I + + G + A + E M ++
Sbjct: 444 MQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVG-------------------- 483
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
LS D TY+++I+ L ++ A+ LF EM+ P T
Sbjct: 484 ------------------LSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQGCVPNIVT 525
Query: 489 CRLILDEVKQKHMYDAA 505
+++ + Y A
Sbjct: 526 YNILIALQAKARNYQTA 542
>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Brachypodium distachyon]
Length = 676
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 152/302 (50%), Gaps = 6/302 (1%)
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNI 242
+ A +E+ GL+ N T L++ LCK G E A +FL+L S PN HT+ +
Sbjct: 272 KQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTV 331
Query: 243 FIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
I G+CK ++ A+ + M G P +Y+T+I +C++ +F+ +EL+++M+ +G
Sbjct: 332 MIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREG 391
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
PN+ TY ++ L K G +EA ++ G + D + +I + + A+
Sbjct: 392 FQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYAL 451
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLK 422
++ M ENG PD T+ T+I + E++ + ++ +E P QT+ ++
Sbjct: 452 DLFN-RMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELV-PTKQTYTSMIA 509
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
K GK+ L ++ + MV ++ D TY +I GLC+ ++ E A L++ M+ +
Sbjct: 510 GYCKVGKSTSAL-RVFERMV-QNGCQADSITYGALISGLCKESRLEEARALYEGMLDKRL 567
Query: 483 TP 484
P
Sbjct: 568 VP 569
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 109/425 (25%), Positives = 175/425 (41%), Gaps = 60/425 (14%)
Query: 140 MVDILGKVRQMDQMRALLEEMSKGHIVTLNTIA--------------KVMRR----FSGA 181
+ D G ++ R L H++ L A + MRR F+ A
Sbjct: 68 LADSAGSAAALELFRRLASRQDVRHLMRLYVTAATTFVDRGSLPMAHEAMRRMVAAFAEA 127
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHT 239
G+ +A E+ + GL ET N +L G AR VF + + + P+A +
Sbjct: 128 GRLPEAADMVFEMRSHGLPFCVETANWVLRAGLDTGSFAYARKVFDGMVTRGGLLPDARS 187
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
F I G C+ R++E + M+G G + + I++ +C++ F V EL M
Sbjct: 188 FRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDVSELFRRML 247
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPD-----------------S 342
G PPNVV YT + L K ++A + E+M G KP+
Sbjct: 248 EMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTE 307
Query: 343 RFFNCLIYTLGRASRVQEAVYVYQV-------------------EMPENGVAPDTSTFNT 383
R F L L ++S + V+ Y V M E G+AP+T+T+ T
Sbjct: 308 RAFR-LFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTT 366
Query: 384 MITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVN 443
+I+ G AF ++ +M + E +PN+ T++ L+ K GK E L M N
Sbjct: 367 LISGHCKEGSFNCAFELMNKMRR-EGFQPNIYTYNALIDGLCKKGKIQEAYKVL--RMAN 423
Query: 444 KHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYD 503
L LD TYT++I C+ +A LF M + P T ++ Q+ +
Sbjct: 424 NQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQME 483
Query: 504 AAEKI 508
++K+
Sbjct: 484 ESQKL 488
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 81/188 (43%), Gaps = 4/188 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLN--TIAKVMRRFSGAGQWED 186
G++ + Y ++D L K ++ + +L M+ + L+ T ++ G
Sbjct: 391 GFQPNIYTYNALIDGLCKKGKIQEAYKVLR-MANNQGLQLDKVTYTVMITEHCKQGHITY 449
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIH 245
A+ F+ + G + T L+ C++ ++E ++ +F + L + P T+ I
Sbjct: 450 ALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIA 509
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G+CK+ + A + M +GC I+Y +I C++ + L + M + P
Sbjct: 510 GYCKVGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRLEEARALYEGMLDKRLVP 569
Query: 306 NVVTYTTV 313
VT T+
Sbjct: 570 CEVTPVTL 577
>gi|225442663|ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Vitis vinifera]
Length = 725
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 122/475 (25%), Positives = 217/475 (45%), Gaps = 24/475 (5%)
Query: 14 IPLNPLTSRIRFHSS--SENCSHIVSSSPIESYCSDGARLDHHQVLCVDSPRLPDID--- 68
IPL + S + S + S IV + S + RL +Q ++P + +D
Sbjct: 6 IPLRRMISTLPHLSQRIKQTESEIVQMFKLSSPKDEIQRLPMNQKFPRNNPSVRTLDERF 65
Query: 69 -VIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSC 127
I+ G ++ + LK ++ H LV +++ + + + F+WAG
Sbjct: 66 IRILKIFKWGPDAEKALEVLK-------LKVDHRLVREVL-KIDVEIHVKIQFFKWAGKR 117
Query: 128 PGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGH-IVTLNTIAKVMRRFSGAGQWED 186
+EH S Y ++ L + + +M ++EM + ++ ++++++ A
Sbjct: 118 RNFEHDSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNK 177
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL---KSCIPPNAHTFNIF 243
A+ F ++ + + T N ++ L +EG E ++ E+ C+ P+ T++
Sbjct: 178 ALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCL-PDTVTYSAL 236
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
I + K+ R D A EMK +G HP Y+TI+ Y + K L+ EM+ +GC
Sbjct: 237 IAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGC 296
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
V TYT ++ + K+G EEA I M G KPD N LI LG+A R+ +A+
Sbjct: 297 ALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIK 356
Query: 364 VYQVEMPENGVAPDTSTFNTMI-TMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLK 422
+++ EM P+ T+NT+I +F +AF E+M K P+ T+ L+
Sbjct: 357 LFE-EMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKM-KENGVVPSSFTYSILID 414
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
KT + ++ L LL++M K Y +I+ L +A + E A LF+E+
Sbjct: 415 GFCKTNRVEKAL-LLLEEMDEKGFAPCP-AAYCSLINALGKAKRYEAANELFQEL 467
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 170/377 (45%), Gaps = 78/377 (20%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDA 187
G +++IY ++ I K+ ++++ L++EM KG +T+ T ++++ AG+ E+A
Sbjct: 260 GLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEA 319
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS--CIP----------- 234
F + G + + +N L++ L K G++ A +F E++S C P
Sbjct: 320 YSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKA 379
Query: 235 ------------------------PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHP 270
P++ T++I I G+CK NRV++A ++EM G P
Sbjct: 380 LFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAP 439
Query: 271 CVISYSTIIQSYCRQ------------------YNFSKVY-----------------ELL 295
C +Y ++I + + Y+ ++VY +L
Sbjct: 440 CPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLF 499
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
+EM+ GC P+V Y +MS + + G +EA + M+ G PD N ++ R
Sbjct: 500 NEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFART 559
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQ 415
+ A+ ++ M + + PD ++NT++ S G E+A +++EMN + + ++
Sbjct: 560 GGPKGAIEMF-TRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNS-KGFEYDLI 617
Query: 416 TFHPLLKSCFKTGKTDE 432
T+ +L++ GK DE
Sbjct: 618 TYSSILEA---VGKIDE 631
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 135/296 (45%), Gaps = 6/296 (2%)
Query: 65 PDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQ--PSHYLVNKLIHRFKDDWKSALGIFR 122
PD+ +I + +++ + ++K ++Q P+ N +I + A F
Sbjct: 333 PDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFL 392
Query: 123 WAGSCP--GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFS 179
W G SS Y +++D K ++++ LLEEM KG ++
Sbjct: 393 WYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALG 452
Query: 180 GAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAH 238
A ++E A F EL + +++ L K G++ A +F E+K P+ +
Sbjct: 453 KAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVY 512
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
+N + G ++ DEA ++ M+ +GC P + S++ I+ + R E+ M
Sbjct: 513 AYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRM 572
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGR 354
+ P+VV+Y TV+ L+++G FEEA ++ ++M G + D ++ ++ +G+
Sbjct: 573 KNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSILEAVGK 628
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 94/211 (44%), Gaps = 3/211 (1%)
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
+Y +I ++++ + EM C + ++ L K+ +A+ I ++
Sbjct: 126 TYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNKALSIFYQI 185
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
K KP S +N +I L + ++ +Y E PDT T++ +I F G
Sbjct: 186 KGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLGR 245
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
+ A + +EM K P + + +L FK G+ ++ L L+ +M K +L + T
Sbjct: 246 DDSAISLFDEM-KENGLHPTAKIYTTILGIYFKLGRVEKALG-LVQEMKEK-GCALTVYT 302
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
YT +I G+ +A K E AY +F M+ P
Sbjct: 303 YTELIKGVGKAGKVEEAYSIFMNMLKEGCKP 333
>gi|449440748|ref|XP_004138146.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Cucumis sativus]
Length = 874
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 159/336 (47%), Gaps = 11/336 (3%)
Query: 101 YLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM 160
Y N+++ R DD ALG F W P + H Y M+ +LG+ +Q + LL++M
Sbjct: 347 YQANQILKRV-DDHAVALGFFYWLKRLPRFRHDGHTYTTMIGLLGRAKQFAAINKLLDQM 405
Query: 161 SKG----HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKE 216
K ++VT N +++ + A +DAV F ++ G E + T L+D K
Sbjct: 406 IKDGCQPNVVTYN---RIIHSYGRANYLQDAVNVFKQMQEAGCEPDRVTYCTLIDIHAKS 462
Query: 217 GKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISY 275
G +++A ++ +++ + P+ T+++ I+ K ++ A M GC P +++Y
Sbjct: 463 GFLDVAMGMYEKMQDAGLTPDTFTYSVMINCLGKAGHLNAAHRLFCRMVDEGCVPNLVTY 522
Query: 276 STIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKI 335
+ +I + N+ +L +MQ G P+ VTY VM L G EEA I +M+
Sbjct: 523 NIMIALQAKARNYEIALKLYRDMQQSGFEPDKVTYCIVMEVLGHCGFLEEAEGIFIEMQK 582
Query: 336 VGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHE 395
PD + L+ G++ VQ+A Y M + G+ P+ T N++++ F
Sbjct: 583 KNWVPDEPVYGLLVDLWGKSGNVQKAWEWYHA-MLKAGLKPNVPTCNSLLSAFLRVHQLS 641
Query: 396 KAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
A+ +L+ M KP++QT+ LL C D
Sbjct: 642 DAYQLLQSMLTF-GLKPSLQTYTLLLSCCTDAQTND 676
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 131/278 (47%), Gaps = 5/278 (1%)
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
+ HT+ I + + + +M GC P V++Y+ II SY R +
Sbjct: 378 DGHTYTTMIGLLGRAKQFAAINKLLDQMIKDGCQPNVVTYNRIIHSYGRANYLQDAVNVF 437
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
+MQ GC P+ VTY T++ AKSG + A+ + EKM+ G PD+ ++ +I LG+A
Sbjct: 438 KQMQEAGCEPDRVTYCTLIDIHAKSGFLDVAMGMYEKMQDAGLTPDTFTYSVMINCLGKA 497
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQ 415
+ A ++ M + G P+ T+N MI + + ++E A + +M + +P+
Sbjct: 498 GHLNAAHRLF-CRMVDEGCVPNLVTYNIMIALQAKARNYEIALKLYRDMQQ-SGFEPDKV 555
Query: 416 TFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFK 475
T+ +++ G +E ++ + K + D Y L++ ++ + A+ +
Sbjct: 556 TYCIVMEVLGHCGFLEEAEGIFIE--MQKKNWVPDEPVYGLLVDLWGKSGNVQKAWEWYH 613
Query: 476 EMIGHDITPRYQTCRLILDEVKQKH-MYDAAEKIEAVM 512
M+ + P TC +L + H + DA + +++++
Sbjct: 614 AMLKAGLKPNVPTCNSLLSAFLRVHQLSDAYQLLQSML 651
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 177/352 (50%), Gaps = 12/352 (3%)
Query: 131 EHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKG---HIVTLNTIAKVMRRFSGAGQWED 186
E IY ++D L + ++ L EM +KG ++VT N++ + + + G+W D
Sbjct: 252 EADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY---GRWSD 308
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIH 245
A R ++ + N T + L+D KEGK+ A ++ E+ K I P+ T++ I+
Sbjct: 309 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 368
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G+C +R+DEA+ + M C P V++Y+T+I+ +C+ + EL EM +G
Sbjct: 369 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG 428
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N VTY T++ L ++GD + A +I +KM G PD ++ L+ L + ++++A+ V+
Sbjct: 429 NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVF 488
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
+ + ++ + PD T+N MI G E + + ++ L+ KPNV + ++
Sbjct: 489 EY-LQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS-LKGVKPNVIIYTTMISGFC 546
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
+ G +E L +M L T TL+ L +K A L+ KEM
Sbjct: 547 RKGLKEEA-DALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELI-KEM 596
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 177/361 (49%), Gaps = 8/361 (2%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++++ + Q+ A+L +M K G+ + T++ ++ + + +AV D++
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 177
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKINRV 253
+ NT T N L+ L K A ++ + + C P+ T+ ++G CK +
Sbjct: 178 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGC-QPDLFTYGTVVNGLCKRGDI 236
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
D A +++M+ V+ Y+TII + C N + L EM +G PNVVTY ++
Sbjct: 237 DLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 296
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
+ L G + +A R+ M P+ F+ LI + ++ EA +Y EM +
Sbjct: 297 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD-EMIKRS 355
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
+ PD T++++I F H ++A H+ E M + C PNV T++ L+K K + +E
Sbjct: 356 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS-KDCFPNVVTYNTLIKGFCKAKRVEEG 414
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
+ +L +M ++ L + TY +I GL +A C+ A +FK+M+ + P T ++L
Sbjct: 415 M-ELFREM-SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL 472
Query: 494 D 494
D
Sbjct: 473 D 473
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 160/332 (48%), Gaps = 6/332 (1%)
Query: 155 ALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTL 213
AL++ M ++G L T V+ G + A+ ++ +E + ++D L
Sbjct: 206 ALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDAL 265
Query: 214 CKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCV 272
C V A ++F E+ + I PN T+N I C R +A + +M +P V
Sbjct: 266 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 325
Query: 273 ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEK 332
+++S +I ++ ++ + +L DEM + P++ TY+++++ +EA + E
Sbjct: 326 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 385
Query: 333 MKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
M P+ +N LI +A RV+E + +++ EM + G+ +T T+NT+I G
Sbjct: 386 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR-EMSQRGLVGNTVTYNTLIQGLFQAG 444
Query: 393 HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
+ A + ++M + P++ T+ LL K GK ++ L ++ + + K + DI
Sbjct: 445 DCDMAQKIFKKMVS-DGVPPDIITYSILLDGLCKYGKLEKAL--VVFEYLQKSKMEPDIY 501
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
TY ++I G+C+A K E + LF + + P
Sbjct: 502 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 533
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 114/221 (51%), Gaps = 8/221 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK----GHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++ K +++++ L EMS+ G+ VT NT+ + + + AG + A + F
Sbjct: 398 YNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ---AGDCDMAQKIFK 454
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKIN 251
++ + G+ + T ++LLD LCK GK+E A VF L KS + P+ +T+NI I G CK
Sbjct: 455 KMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAG 514
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
+V++ + G P VI Y+T+I +CR+ + L EM+ G PN TY
Sbjct: 515 KVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYN 574
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
T++ + GD + + ++M+ G D+ + +I L
Sbjct: 575 TLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 102/237 (43%), Gaps = 4/237 (1%)
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
++D+A EM P ++ ++ ++ + + F V L + MQ ++ +Y
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
+++ + A+ + KM +G +PD + L+ R+ EAV + +M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVD-QMFV 178
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
P+T TFNT+I H +A +++ M C+P++ T+ ++ K G D
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVA-RGCQPDLFTYGTVVNGLCKRGDID 237
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
LS LL M K + D+ YT +I LC A LF EM I P T
Sbjct: 238 LALS-LLKKM-EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 292
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.135 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,902,899,442
Number of Sequences: 23463169
Number of extensions: 316726755
Number of successful extensions: 884178
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6769
Number of HSP's successfully gapped in prelim test: 4869
Number of HSP's that attempted gapping in prelim test: 714380
Number of HSP's gapped (non-prelim): 59665
length of query: 515
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 368
effective length of database: 8,910,109,524
effective search space: 3278920304832
effective search space used: 3278920304832
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 79 (35.0 bits)