BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010202
(515 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9M8W9|PP211_ARATH Pentatricopeptide repeat-containing protein At3g04130,
mitochondrial OS=Arabidopsis thaliana GN=At3g04130 PE=2
SV=2
Length = 508
Score = 581 bits (1497), Expect = e-165, Method: Compositional matrix adjust.
Identities = 268/446 (60%), Positives = 345/446 (77%), Gaps = 1/446 (0%)
Query: 68 DVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSC 127
+VI+ + SED+VF+ L D +C + S LV+KL+HRF+DDW+SALGI +WA SC
Sbjct: 55 NVIVGRDGDRDSEDDVFKRLSSDEICKRVNLSDGLVHKLLHRFRDDWRSALGILKWAESC 114
Query: 128 PGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G++HSS+ Y+M VDILGK ++ D+M+ +E M +VTLNT+AK+MRRF+GAG+WE+A
Sbjct: 115 KGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEA 174
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGW 247
V FD LG FGLEKNTE+MNLLLDTLCKE +VE AR V L+LKS I PNAHTFNIFIHGW
Sbjct: 175 VGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITPNAHTFNIFIHGW 234
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
CK NRV+EA WTIQEMKGHG PCVISY+TII+ YC+Q+ F KVYE+L EM+A G PPN
Sbjct: 235 CKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNS 294
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
+TYTT+MS L +FEEA+R+ +MK G KPDS F+NCLI+TL RA R++EA V++V
Sbjct: 295 ITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRV 354
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKT 427
EMPE GV+ +TST+N+MI M+ HH +KA +L+EM C P+V T+ PLL+SCFK
Sbjct: 355 EMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKR 414
Query: 428 GKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
G E + +LL +MV KHHLSLD +TYT +I LCRAN CEWAY LF+EMI DITPR++
Sbjct: 415 GDVVE-VGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHR 473
Query: 488 TCRLILDEVKQKHMYDAAEKIEAVMK 513
TC L+L+EVK+K+M+++AE+IE +MK
Sbjct: 474 TCLLLLEEVKKKNMHESAERIEHIMK 499
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 70/163 (42%), Gaps = 4/163 (2%)
Query: 178 FSGAGQWEDAVRTFD-ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC--IP 234
+ AG+ E+A R F E+ G+ NT T N ++ C + + A + E++S
Sbjct: 339 LARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCN 398
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEM-KGHGCHPCVISYSTIIQSYCRQYNFSKVYE 293
P+ HT+ + K V E ++EM H +Y+ +IQ CR Y
Sbjct: 399 PDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYC 458
Query: 294 LLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIV 336
L +EM +Q P T ++ + K E A RI MK V
Sbjct: 459 LFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERIEHIMKTV 501
>sp|Q9LUJ4|PP248_ARATH Pentatricopeptide repeat-containing protein At3g22670,
mitochondrial OS=Arabidopsis thaliana GN=At3g22670 PE=2
SV=1
Length = 562
Score = 322 bits (826), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 176/442 (39%), Positives = 274/442 (61%), Gaps = 13/442 (2%)
Query: 78 SSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIY 137
+S ++V + L + C+ + + LV +++ RF + W A G F WA S GY HS Y
Sbjct: 114 TSHEDVVKELSK---CDVV-VTESLVLQVLRRFSNGWNQAYGFFIWANSQTGYVHSGHTY 169
Query: 138 EMMVDILGKVRQMDQMRALLEEMSKGH---IVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
MVD+LGK R D M L+ EM+K +VTL+T++KVMRR + +G++ AV F E+
Sbjct: 170 NAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEM 229
Query: 195 -GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRV 253
++G++ +T MN L+D L KE +E A VFL+L I P+A TFNI IHG+CK +
Sbjct: 230 EKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPDARTFNILIHGFCKARKF 289
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
D+A+ + MK P V++Y++ +++YC++ +F +V E+L+EM+ GC PNVVTYT V
Sbjct: 290 DDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIV 349
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
M L KS EA+ + EKMK G PD++F++ LI+ L + R ++A +++ +M G
Sbjct: 350 MHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFE-DMTNQG 408
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEM--NKLEHCKPNVQTFHPLLKSCFKTGKTD 431
V D +NTMI+ HH E A +L+ M + E C PNV+T+ PLLK C K
Sbjct: 409 VRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKM- 467
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRL 491
+ L LL MV K+ +S+D++TY L+I GLC + K E A L F+E + + PR TC++
Sbjct: 468 KLLGILLHHMV-KNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKM 526
Query: 492 ILDEVKQKHMYDAAEKIEAVMK 513
++DE+++K+M +A KI+++++
Sbjct: 527 LVDELEKKNMAEAKLKIQSLVQ 548
>sp|Q3EAF8|PP294_ARATH Pentatricopeptide repeat-containing protein At3g62540,
mitochondrial OS=Arabidopsis thaliana GN=At3g62540 PE=2
SV=1
Length = 599
Score = 192 bits (489), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 130/459 (28%), Positives = 222/459 (48%), Gaps = 20/459 (4%)
Query: 25 FHSSSENCSHIVSSSPIESYCSDGARLDHHQVLCVDSPRLPD-----IDVIISKVHVGSS 79
F S S N S +ES C + + V CV+S P+ VI + +
Sbjct: 92 FSSGSSNVSDGCDEE-VESECDND---EETGVSCVESSTNPEEVERVCKVIDELFALDRN 147
Query: 80 EDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEM 139
+ V +K D SH L+ +++ RF+ K A F WA G+ H+S Y
Sbjct: 148 MEAVLDEMKLDL-------SHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHASRTYNS 200
Query: 140 MVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGL 199
M+ IL K RQ + M ++LEEM ++T+ T M+ F+ A + + AV F+ + +
Sbjct: 201 MMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKF 260
Query: 200 EKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWT 259
+ ET+N LLD+L + + A+ +F +LK PN T+ + ++GWC++ + EA
Sbjct: 261 KIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARI 320
Query: 260 IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK 319
+M HG P +++++ +++ R S +L M+++G PNV +YT ++ K
Sbjct: 321 WNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCK 380
Query: 320 SGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTS 379
E AI + M G +PD+ + CLI G ++ + VY EM E G PD
Sbjct: 381 QSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKL-DTVYELLKEMQEKGHPPDGK 439
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLD 439
T+N +I + ++ E + +M + E +P++ TF+ ++KS F + E + D
Sbjct: 440 TYNALIKLMANQKMPEHGTRIYNKMIQNE-IEPSIHTFNMIMKSYF-VARNYEMGRAVWD 497
Query: 440 DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
+M+ K + D +YT++I GL K A +EM+
Sbjct: 498 EMIKK-GICPDDNSYTVLIRGLISEGKSREACRYLEEML 535
Score = 62.4 bits (150), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 150/385 (38%), Gaps = 46/385 (11%)
Query: 126 SCPGYEHSSEIYEMMVDILGKVRQMDQ-MRALLEEMSKGHIVTLNTIAKVMRRFSGAGQW 184
SC + E E + ++ ++ +D+ M A+L+EM ++ + I +V+ RF A +
Sbjct: 120 SCVESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLD--LSHDLIVEVLERFRHARK- 176
Query: 185 EDAVRTFDELGTF-GLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIF 243
A R F G + T N ++ L K + E SV E+ + TF I
Sbjct: 177 -PAFRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIA 235
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
+ + +A + MK + V + + ++ S R + L D+++ +
Sbjct: 236 MKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-F 294
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
PN++TYT +++ + + EA RI M G KPD N ++ L R+ + +A+
Sbjct: 295 TPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIK 354
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
++ V M G P+ ++ MI F E A
Sbjct: 355 LFHV-MKSKGPCPNVRSYTIMIRDFCKQSSMETAI------------------------- 388
Query: 424 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
+ DDMV+ L D YT +I G K + Y L KEM
Sbjct: 389 ------------EYFDDMVDSG-LQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHP 435
Query: 484 PRYQTCRLILDEVKQKHMYDAAEKI 508
P +T ++ + + M + +I
Sbjct: 436 PDGKTYNALIKLMANQKMPEHGTRI 460
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 86/202 (42%), Gaps = 1/202 (0%)
Query: 139 MMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
M+ +L +++ D ++ SKG + + ++R F E A+ FD++ G
Sbjct: 339 MLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSG 398
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQ 257
L+ + L+ + K++ + E++ PP+ T+N I +
Sbjct: 399 LQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGT 458
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
+M + P + +++ I++SY N+ + DEM +G P+ +YT ++ L
Sbjct: 459 RIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGL 518
Query: 318 AKSGDFEEAIRITEKMKIVGSK 339
G EA R E+M G K
Sbjct: 519 ISEGKSREACRYLEEMLDKGMK 540
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 81/172 (47%), Gaps = 6/172 (3%)
Query: 342 SRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVL 401
SR +N ++ L + + + V V + EM G+ TF + F+ +KA +
Sbjct: 195 SRTYNSMMSILAKTRQFETMVSVLE-EMGTKGLLT-METFTIAMKAFAAAKERKKAVGIF 252
Query: 402 EEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGL 461
E M K + K V+T + LL S + E +Q+L D + K + ++ TYT++++G
Sbjct: 253 ELMKKYKF-KIGVETINCLLDSLGRAKLGKE--AQVLFDKL-KERFTPNMMTYTVLLNGW 308
Query: 462 CRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
CR A ++ +MI H + P ++L+ + + A K+ VMK
Sbjct: 309 CRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMK 360
Score = 36.2 bits (82), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 37/218 (16%), Positives = 79/218 (36%), Gaps = 35/218 (16%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDA 187
G + + +Y ++ G +++D + LL+EM KGH T +++ + E
Sbjct: 398 GLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHG 457
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGW 247
R ++++ +++ I P+ HTFN+ + +
Sbjct: 458 TRIYNKM----------------------------------IQNEIEPSIHTFNMIMKSY 483
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
+ + EM G P SY+ +I+ + + L+EM +G +
Sbjct: 484 FVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPL 543
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFF 345
+ Y + + G E + ++ K G + F
Sbjct: 544 IDYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEIF 581
>sp|Q9LEQ7|PP382_ARATH Pentatricopeptide repeat-containing protein At5g14820,
mitochondrial OS=Arabidopsis thaliana GN=At5g14820 PE=2
SV=1
Length = 598
Score = 192 bits (487), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 130/459 (28%), Positives = 221/459 (48%), Gaps = 20/459 (4%)
Query: 25 FHSSSENCSHIVSSSPIESYCSDGARLDHHQVLCVDSPRLPD-----IDVIISKVHVGSS 79
F S S N S +ES C + + V CV+S P+ VI + +
Sbjct: 91 FSSGSSNVSDGCDEE-VESECDND---EETGVSCVESSTNPEEVERVCKVIDELFALDRN 146
Query: 80 EDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEM 139
+ V +K D SH L+ +++ RF+ K A F WA G+ H S Y
Sbjct: 147 MEAVLDEMKLDL-------SHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNS 199
Query: 140 MVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGL 199
M+ IL K RQ + M ++LEEM ++T+ T M+ F+ A + + AV F+ + +
Sbjct: 200 MMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKF 259
Query: 200 EKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWT 259
+ ET+N LLD+L + + A+ +F +LK PN T+ + ++GWC++ + EA
Sbjct: 260 KIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARI 319
Query: 260 IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK 319
+M HG P +++++ +++ R S +L M+++G PNV +YT ++ K
Sbjct: 320 WNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCK 379
Query: 320 SGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTS 379
E AI + M G +PD+ + CLI G ++ + VY EM E G PD
Sbjct: 380 QSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKL-DTVYELLKEMQEKGHPPDGK 438
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLD 439
T+N +I + ++ E + +M + E +P++ TF+ ++KS F + E + D
Sbjct: 439 TYNALIKLMANQKMPEHGTRIYNKMIQNE-IEPSIHTFNMIMKSYF-VARNYEMGRAVWD 496
Query: 440 DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
+M+ K + D +YT++I GL K A +EM+
Sbjct: 497 EMIKK-GICPDDNSYTVLIRGLISEGKSREACRYLEEML 534
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 151/385 (39%), Gaps = 46/385 (11%)
Query: 126 SCPGYEHSSEIYEMMVDILGKVRQMDQ-MRALLEEMSKGHIVTLNTIAKVMRRFSGAGQW 184
SC + E E + ++ ++ +D+ M A+L+EM ++ + I +V+ RF A +
Sbjct: 119 SCVESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLD--LSHDLIVEVLERFRHARK- 175
Query: 185 EDAVRTFDELGTF-GLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIF 243
A R F G ++ T N ++ L K + E SV E+ + TF I
Sbjct: 176 -PAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIA 234
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
+ + +A + MK + V + + ++ S R + L D+++ +
Sbjct: 235 MKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-F 293
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
PN++TYT +++ + + EA RI M G KPD N ++ L R+ + +A+
Sbjct: 294 TPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIK 353
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
++ V M G P+ ++ MI F E A
Sbjct: 354 LFHV-MKSKGPCPNVRSYTIMIRDFCKQSSMETAI------------------------- 387
Query: 424 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
+ DDMV+ L D YT +I G K + Y L KEM
Sbjct: 388 ------------EYFDDMVDSG-LQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHP 434
Query: 484 PRYQTCRLILDEVKQKHMYDAAEKI 508
P +T ++ + + M + +I
Sbjct: 435 PDGKTYNALIKLMANQKMPEHGTRI 459
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 86/202 (42%), Gaps = 1/202 (0%)
Query: 139 MMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
M+ +L +++ D ++ SKG + + ++R F E A+ FD++ G
Sbjct: 338 MLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSG 397
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQ 257
L+ + L+ + K++ + E++ PP+ T+N I +
Sbjct: 398 LQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGT 457
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
+M + P + +++ I++SY N+ + DEM +G P+ +YT ++ L
Sbjct: 458 RIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGL 517
Query: 318 AKSGDFEEAIRITEKMKIVGSK 339
G EA R E+M G K
Sbjct: 518 ISEGKSREACRYLEEMLDKGMK 539
Score = 52.4 bits (124), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 83/177 (46%), Gaps = 6/177 (3%)
Query: 337 GSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEK 396
G DSR +N ++ L + + + V V + EM G+ TF + F+ +K
Sbjct: 189 GFAHDSRTYNSMMSILAKTRQFETMVSVLE-EMGTKGLLT-METFTIAMKAFAAAKERKK 246
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTL 456
A + E M K + K V+T + LL S + E +Q+L D + K + ++ TYT+
Sbjct: 247 AVGIFELMKKYKF-KIGVETINCLLDSLGRAKLGKE--AQVLFDKL-KERFTPNMMTYTV 302
Query: 457 VIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
+++G CR A ++ +MI H + P ++L+ + + A K+ VMK
Sbjct: 303 LLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMK 359
Score = 36.2 bits (82), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 37/218 (16%), Positives = 79/218 (36%), Gaps = 35/218 (16%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDA 187
G + + +Y ++ G +++D + LL+EM KGH T +++ + E
Sbjct: 397 GLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHG 456
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGW 247
R ++++ +++ I P+ HTFN+ + +
Sbjct: 457 TRIYNKM----------------------------------IQNEIEPSIHTFNMIMKSY 482
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
+ + EM G P SY+ +I+ + + L+EM +G +
Sbjct: 483 FVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPL 542
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFF 345
+ Y + + G E + ++ K G + F
Sbjct: 543 IDYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEIF 580
>sp|Q9LZP3|PP293_ARATH Pentatricopeptide repeat-containing protein At3g62470,
mitochondrial OS=Arabidopsis thaliana GN=At3g62470 PE=2
SV=1
Length = 599
Score = 187 bits (476), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 129/459 (28%), Positives = 221/459 (48%), Gaps = 20/459 (4%)
Query: 25 FHSSSENCSHIVSSSPIESYCSDGARLDHHQVLCVDSPRLPD-----IDVIISKVHVGSS 79
F S S N S +ES C + + V CV+S P+ VI + +
Sbjct: 92 FSSGSSNVSDGCDEE-VESECDND---EETGVSCVESSTNPEEVERVCKVIDELFALDRN 147
Query: 80 EDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEM 139
+ V +K D SH L+ +++ RF+ K A F WA G+ H S Y
Sbjct: 148 MEAVLDEMKLDL-------SHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNS 200
Query: 140 MVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGL 199
M+ IL K RQ + M ++LEEM ++T+ T M+ F+ A + + AV F+ + +
Sbjct: 201 MMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKF 260
Query: 200 EKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWT 259
+ ET+N LLD+L + + A+ +F +LK PN T+ + ++GWC++ + EA
Sbjct: 261 KIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARI 320
Query: 260 IQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAK 319
+M G P +++++ +++ R S +L M+++G PNV +YT ++ K
Sbjct: 321 WNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCK 380
Query: 320 SGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTS 379
E AI + M G +PD+ + CLI G ++ + VY EM E G PD
Sbjct: 381 QSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKL-DTVYELLKEMQEKGHPPDGK 439
Query: 380 TFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLD 439
T+N +I + ++ E A + +M + E +P++ TF+ ++KS F + E + +
Sbjct: 440 TYNALIKLMANQKMPEHATRIYNKMIQNE-IEPSIHTFNMIMKSYF-MARNYEMGRAVWE 497
Query: 440 DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
+M+ K + D +YT++I GL K A +EM+
Sbjct: 498 EMIKK-GICPDDNSYTVLIRGLIGEGKSREACRYLEEML 535
Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 86/385 (22%), Positives = 152/385 (39%), Gaps = 46/385 (11%)
Query: 126 SCPGYEHSSEIYEMMVDILGKVRQMDQ-MRALLEEMSKGHIVTLNTIAKVMRRFSGAGQW 184
SC + E E + ++ ++ +D+ M A+L+EM ++ + I +V+ RF A +
Sbjct: 120 SCVESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLD--LSHDLIVEVLERFRHARK- 176
Query: 185 EDAVRTFDELGTF-GLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIF 243
A R F G ++ T N ++ L K + E SV E+ + TF I
Sbjct: 177 -PAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIA 235
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
+ + +A + MK + V + + ++ S R + L D+++ +
Sbjct: 236 MKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-F 294
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
PN++TYT +++ + + EA RI M G KPD N ++ L R+ + +A+
Sbjct: 295 TPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIK 354
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
++ V M G P+ ++ MI F E A
Sbjct: 355 LFHV-MKSKGPCPNVRSYTIMIRDFCKQSSMETAI------------------------- 388
Query: 424 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
+ DDMV+ L D YT +I G K + Y L KEM
Sbjct: 389 ------------EYFDDMVDSG-LQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHP 435
Query: 484 PRYQTCRLILDEVKQKHMYDAAEKI 508
P +T ++ + + M + A +I
Sbjct: 436 PDGKTYNALIKLMANQKMPEHATRI 460
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 86/202 (42%), Gaps = 1/202 (0%)
Query: 139 MMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
M+ +L ++ D ++ SKG + + ++R F E A+ FD++ G
Sbjct: 339 MLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSG 398
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQ 257
L+ + L+ + K++ + E++ PP+ T+N I + A
Sbjct: 399 LQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHAT 458
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
+M + P + +++ I++SY N+ + +EM +G P+ +YT ++ L
Sbjct: 459 RIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGL 518
Query: 318 AKSGDFEEAIRITEKMKIVGSK 339
G EA R E+M G K
Sbjct: 519 IGEGKSREACRYLEEMLDKGMK 540
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 6/177 (3%)
Query: 337 GSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEK 396
G DSR +N ++ L + + + V V + EM G+ TF + F+ +K
Sbjct: 190 GFAHDSRTYNSMMSILAKTRQFETMVSVLE-EMGTKGLLT-METFTIAMKAFAAAKERKK 247
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTL 456
A + E M K + K V+T + LL S + E +Q+L D + K + ++ TYT+
Sbjct: 248 AVGIFELMKKYKF-KIGVETINCLLDSLGRAKLGKE--AQVLFDKL-KERFTPNMMTYTV 303
Query: 457 VIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
+++G CR A ++ +MI + P ++L+ + + A K+ VMK
Sbjct: 304 LLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMK 360
Score = 40.0 bits (92), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 52/267 (19%), Positives = 100/267 (37%), Gaps = 10/267 (3%)
Query: 81 DEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMM 140
D + Q LK D V + + L L R K D + + G CP Y +M
Sbjct: 323 DMIDQGLKPDIVAHNVM----LEGLLRSRKKSDAIKLFHVMKSKGPCPNVRS----YTIM 374
Query: 141 VDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAV-RTFDELGTFGL 199
+ K M+ ++M + + + G + D V E+ G
Sbjct: 375 IRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGH 434
Query: 200 EKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQW 258
+ +T N L+ + + E A ++ ++ ++ I P+ HTFN+ + + + +
Sbjct: 435 PPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRA 494
Query: 259 TIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLA 318
+EM G P SY+ +I+ + + L+EM +G ++ Y +
Sbjct: 495 VWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFH 554
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRFF 345
+ G E + ++ K G + F
Sbjct: 555 RGGQPEIFEELAQRAKFSGKFAAAEIF 581
>sp|Q9LFM6|PP375_ARATH Pentatricopeptide repeat-containing protein At5g11310,
mitochondrial OS=Arabidopsis thaliana GN=At5g11310 PE=2
SV=1
Length = 602
Score = 182 bits (462), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 120/434 (27%), Positives = 221/434 (50%), Gaps = 18/434 (4%)
Query: 95 AIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMR 154
I+PS LV+ L R +F+WA PG+ S +++ +V+ L K R+ +
Sbjct: 96 GIEPSVELVHALFDRLSSSPMLLHSVFKWAEMKPGFTLSPSLFDSVVNSLCKAREFEIAW 155
Query: 155 ALLEEMSKG----HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTET----M 206
+L+ + + ++V+ +T ++RR++ AG + A+R F+ ++ + T +
Sbjct: 156 SLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFEFARSYEPVCKSATELRLL 215
Query: 207 NLLLDTLCKEGKVELARSVFLE-----LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQ 261
+LLD LCKEG V A S++LE + S P+ FNI ++GW + ++ +A+ +
Sbjct: 216 EVLLDALCKEGHVREA-SMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWE 274
Query: 262 EMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSG 321
EMK P V++Y T+I+ YCR E+L+EM+ N + + ++ L ++G
Sbjct: 275 EMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAG 334
Query: 322 DFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTF 381
EA+ + E+ + S P +N L+ +A + A + ++ M GV P T+T+
Sbjct: 335 RLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMM-TRGVDPTTTTY 393
Query: 382 NTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDM 441
N FS H E+ ++ ++ + H P+ T+H +LK + GK + Q+ +M
Sbjct: 394 NHFFKYFSKHNKTEEGMNLYFKLIEAGHS-PDRLTYHLILKMLCEDGKLSLAM-QVNKEM 451
Query: 442 VNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHM 501
N+ + D+ T T++IH LCR E A+ F + I P+Y T ++I + ++ K M
Sbjct: 452 KNR-GIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGM 510
Query: 502 YDAAEKIEAVMKKL 515
D A+++ ++M L
Sbjct: 511 SDMAKRLSSLMSSL 524
>sp|Q9LFQ4|PP383_ARATH Pentatricopeptide repeat-containing protein At5g15010,
mitochondrial OS=Arabidopsis thaliana GN=At5g15010 PE=2
SV=2
Length = 572
Score = 182 bits (461), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 127/412 (30%), Positives = 208/412 (50%), Gaps = 15/412 (3%)
Query: 77 GSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEI 136
GS E+ L++ C+ ++PS+ LV +++ R ++DW++A F WAG GY S
Sbjct: 108 GSDRKELRNKLEE---CD-VKPSNELVVEILSRVRNDWETAFTFFVWAGKQQGYVRSVRE 163
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK--GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
Y M+ ILGK+R+ D L++EM K +V T+ ++R++ A+ TF
Sbjct: 164 YHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAY 223
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCK-INRV 253
F LE + LL LC+ V A + K P +A +FNI ++GWC I
Sbjct: 224 KRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSP 283
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
EA+ EM G V+SYS++I Y + + +KV +L D M+ + P+ Y V
Sbjct: 284 REAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAV 343
Query: 314 MSYLAKSGDFEEAIRITEKM-KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPEN 372
+ LAK+ EA + + M + G +P+ +N LI L +A + +EA V+ EM E
Sbjct: 344 VHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFD-EMLEK 402
Query: 373 GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
G+ P T++ + + E+ F +L +M K+ C+P V+T+ L++ + D
Sbjct: 403 GLFPTIRTYHAFMRILR---TGEEVFELLAKMRKM-GCEPTVETYIMLIRKLCRWRDFDN 458
Query: 433 CLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
L LL D + + + D+++Y ++IHGL K E AY +KEM + P
Sbjct: 459 VL--LLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRP 508
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 104/219 (47%), Gaps = 12/219 (5%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQW 184
G +H Y M+ K ++++ L + M K I N + + + S +
Sbjct: 297 GVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEA 356
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIF 243
+ ++T +E G+E N T N L+ LCK K E A+ VF E L+ + P T+
Sbjct: 357 RNLMKTMEE--EKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTY--- 411
Query: 244 IHGWCKINRVDEAQWTI-QEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
H + +I R E + + +M+ GC P V +Y +I+ CR +F V L DEM+ +
Sbjct: 412 -HAFMRILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKT 470
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPD 341
P++ +Y ++ L +G EEA ++MK G +P+
Sbjct: 471 VGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPN 509
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 123/308 (39%), Gaps = 41/308 (13%)
Query: 184 WEDAVRTFDELGTF-GLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPP--NAHTF 240
WE A F G G ++ + ++ L K K + A ++ E++ P N+ T
Sbjct: 141 WETAFTFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTL 200
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
I I +C ++ V +A T K + + +++ + CR N S L+
Sbjct: 201 LIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLI-FCNK 259
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
P + ++ V++ ++GS R E
Sbjct: 260 DKYPFDAKSFNIVLNGWCN---------------VIGS-----------------PREAE 287
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
V++ EM GV D ++++MI+ +S G K + + M K E +P+ + ++ +
Sbjct: 288 RVWM---EMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKK-ECIEPDRKVYNAV 343
Query: 421 LKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH 480
+ + K E L+ M + + ++ TY +I LC+A K E A +F EM+
Sbjct: 344 VHALAKASFVSEA-RNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEK 402
Query: 481 DITPRYQT 488
+ P +T
Sbjct: 403 GLFPTIRT 410
>sp|Q9FVX2|PP129_ARATH Pentatricopeptide repeat-containing protein At1g77360,
mitochondrial OS=Arabidopsis thaliana GN=At1g77360 PE=2
SV=2
Length = 517
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/421 (27%), Positives = 206/421 (48%), Gaps = 9/421 (2%)
Query: 64 LPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRW 123
+ D+ ISKV + S + + +L Q + ++ S +V +++RF++ F+W
Sbjct: 68 VADVAKNISKVLMSSPQLVLDSALDQ----SGLRVSQEVVEDVLNRFRNAGLLTYRFFQW 123
Query: 124 AGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQ 183
+ YEHS Y MM++ K+RQ M L+ M K ++ + T VMR+++ A +
Sbjct: 124 SEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQK 183
Query: 184 WEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIF 243
++A+ F+ + + L N N LL LCK V A+ VF ++ P++ T++I
Sbjct: 184 VDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSIL 243
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
+ GW K + +A+ +EM GCHP +++YS ++ C+ + ++ M C
Sbjct: 244 LEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSIC 303
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
P Y+ ++ EEA+ +M+ G K D FN LI +A+R++ VY
Sbjct: 304 KPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKN-VY 362
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
EM GV P++ + N ++ G ++AF V +M K+ C+P+ T+ ++K
Sbjct: 363 RVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV--CEPDADTYTMVIK- 419
Query: 424 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
F K E ++ M K + + T++++I+GLC + A +L +EMI I
Sbjct: 420 MFCEKKEMETADKVWKYM-RKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIR 478
Query: 484 P 484
P
Sbjct: 479 P 479
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 154/355 (43%), Gaps = 60/355 (16%)
Query: 163 GHIVTLNTIAKVMRRFSGAG-------QWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK 215
G V+ + V+ RF AG QW + R + E + ++++++ K
Sbjct: 95 GLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHY--------EHSVRAYHMMIESTAK 146
Query: 216 EGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISY 275
+ +L + ++ N TF I + + + +VDEA +
Sbjct: 147 IRQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVDEAIYA---------------- 190
Query: 276 STIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKI 335
+N + Y+L PPN+V + ++S L KS + +A + E M+
Sbjct: 191 ----------FNVMEKYDL---------PPNLVAFNGLLSALCKSKNVRKAQEVFENMRD 231
Query: 336 VGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHE 395
+ PDS+ ++ L+ G+ + +A V++ EM + G PD T++ M+ + G +
Sbjct: 232 RFT-PDSKTYSILLEGWGKEPNLPKAREVFR-EMIDAGCHPDIVTYSIMVDILCKAGRVD 289
Query: 396 KAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYT 455
+A ++ M+ CKP + L+ + + +E + L+ + + + D+ +
Sbjct: 290 EALGIVRSMDP-SICKPTTFIYSVLVHTYGTENRLEEAVDTFLE--MERSGMKADVAVFN 346
Query: 456 LVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEA 510
+I C+AN+ + Y + KEM +TP ++C +IL +H+ + EK EA
Sbjct: 347 SLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIIL-----RHLIERGEKDEA 396
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 126/283 (44%), Gaps = 23/283 (8%)
Query: 62 PRLPDI-DVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGI 120
P LP +V + G D V S+ D +C A + ALGI
Sbjct: 251 PNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDE----------------ALGI 294
Query: 121 FRWAGSCPGY-EHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRF 178
R P + ++ IY ++V G ++++ EM + G + ++ F
Sbjct: 295 VRSMD--PSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAF 352
Query: 179 SGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAH 238
A + ++ R E+ + G+ N+++ N++L L + G+ + A VF ++ P+A
Sbjct: 353 CKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCEPDAD 412
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
T+ + I +C+ ++ A + M+ G P + ++S +I C + K LL+EM
Sbjct: 413 TYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEM 472
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIR-ITEKMKIVGSKP 340
G P+ VT+ + L K + E+ ++ + EKM ++ ++P
Sbjct: 473 IEMGIRPSGVTFGRLRQLLIKE-EREDVLKFLNEKMNVLVNEP 514
>sp|P0C8A0|PP275_ARATH Pentatricopeptide repeat-containing protein At3g49730
OS=Arabidopsis thaliana GN=At3g49730 PE=2 SV=1
Length = 638
Score = 179 bits (453), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 112/412 (27%), Positives = 206/412 (50%), Gaps = 9/412 (2%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS 161
L+ +++ R D F WA PGY HS E+ + MV IL K+RQ + L+EEM
Sbjct: 99 LIIRVLSRCGDAGNLGYRFFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMR 158
Query: 162 KGH--IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV 219
K + ++ +MRRF+ A + AV DE+ +GLE + LLD LCK G V
Sbjct: 159 KTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSV 218
Query: 220 ELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
+ A VF +++ PPN F ++GWC+ ++ EA+ + +MK G P ++ ++ ++
Sbjct: 219 KEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLL 278
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKS-GDFEEAIRITEKMKIVGS 338
Y + Y+L+++M+ +G PNV YT ++ L ++ +EA+R+ +M+ G
Sbjct: 279 SGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGC 338
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
+ D + LI + + + V +M + GV P T+ ++ E+
Sbjct: 339 EADIVTYTALISGFCKWGMIDKGYSVLD-DMRKKGVMPSQVTYMQIMVAHEKKEQFEECL 397
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
++E+M K C P++ ++ +++ K G+ E + +L ++M + LS + T+ ++I
Sbjct: 398 ELIEKM-KRRGCHPDLLIYNVVIRLACKLGEVKEAV-RLWNEM-EANGLSPGVDTFVIMI 454
Query: 459 HGLCRANKCEWAYLLFKEMIGHDI--TPRYQTCRLILDEVKQKHMYDAAEKI 508
+G A FKEM+ I P+Y T + +L+ + + + A+ +
Sbjct: 455 NGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDV 506
Score = 92.4 bits (228), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 128/264 (48%), Gaps = 12/264 (4%)
Query: 256 AQWT-IQEMKGHGCHPCVIS---YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
A W I+EM+ +P +I + +++ + K E+LDEM G P+ +
Sbjct: 149 AVWGLIEEMRK--TNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFG 206
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
++ L K+G +EA ++ E M+ P+ R+F L+Y R ++ EA V V+M E
Sbjct: 207 CLLDALCKNGSVKEASKVFEDMR-EKFPPNLRYFTSLLYGWCREGKLMEAKEVL-VQMKE 264
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK-T 430
G+ PD F +++ ++H G A+ ++ +M K +PNV + L+++ +T K
Sbjct: 265 AGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRK-RGFEPNVNCYTVLIQALCRTEKRM 323
Query: 431 DECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCR 490
DE + ++ + ++ DI TYT +I G C+ + Y + +M + P T
Sbjct: 324 DEAMRVFVE--MERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYM 381
Query: 491 LILDEVKQKHMYDAAEKIEAVMKK 514
I+ ++K ++ ++ MK+
Sbjct: 382 QIMVAHEKKEQFEECLELIEKMKR 405
Score = 37.4 bits (85), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 93/217 (42%), Gaps = 45/217 (20%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
IY +++ + K+ ++ + L EM + G ++T ++ F+ G +A F E+
Sbjct: 414 IYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEM 473
Query: 195 GTFGLEKNTE--TMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINR 252
+ G+ + T+ LL+ L ++ K+E+A+ V+ SCI + C++N
Sbjct: 474 VSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVW----SCISNKTSS--------CELN- 520
Query: 253 VDEAQWTIQ----EMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP-PNV 307
+ WTI KGH C SYC LD M+ P PN
Sbjct: 521 --VSAWTIWIHALYAKGHVKEAC---------SYC-----------LDMMEMDLMPQPN- 557
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRF 344
TY +M L K + A ITEK+ + S+ + F
Sbjct: 558 -TYAKLMKGLNKLYNRTIAAEITEKVVKMASEREMSF 593
>sp|Q9FH87|PP447_ARATH Putative pentatricopeptide repeat-containing protein At5g65820
OS=Arabidopsis thaliana GN=At5g65820 PE=3 SV=1
Length = 637
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 208/411 (50%), Gaps = 8/411 (1%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS 161
L+ ++++R D F WA P Y HS E+Y+ MV IL K+RQ + L+EEM
Sbjct: 115 LIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMR 174
Query: 162 KGH--IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV 219
K + ++ +++RF+ A + A+ DE+ FG E + LLD LCK G V
Sbjct: 175 KENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSV 234
Query: 220 ELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
+ A +F +++ P N F ++GWC++ ++ EA++ + +M G P ++ Y+ ++
Sbjct: 235 KDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLL 294
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
Y + Y+LL +M+ +G PN YT ++ L K EEA+++ +M+ +
Sbjct: 295 SGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECE 354
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
D + L+ + ++ + Y+ +M + G+ P T+ ++ E+
Sbjct: 355 ADVVTYTALVSGFCKWGKI-DKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLE 413
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIH 459
++E+M ++E+ P++ ++ +++ K G+ E + +L ++M ++ LS + T+ ++I+
Sbjct: 414 LMEKMRQIEY-HPDIGIYNVVIRLACKLGEVKEAV-RLWNEM-EENGLSPGVDTFVIMIN 470
Query: 460 GLCRANKCEWAYLLFKEMIGHDI--TPRYQTCRLILDEVKQKHMYDAAEKI 508
GL A FKEM+ + +Y T +L+L+ V + + A+ +
Sbjct: 471 GLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDV 521
Score = 38.1 bits (87), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 93/214 (43%), Gaps = 40/214 (18%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
IY +++ + K+ ++ + L EM + G ++T ++ + G +A F E+
Sbjct: 429 IYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEM 488
Query: 195 GTFGLEKNTE--TMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINR 252
T GL ++ T+ LLL+T+ K+ K+E+A+ V+ SCI G C++N
Sbjct: 489 VTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVW----SCITSK---------GACELNV 535
Query: 253 VDEAQWTIQEM--KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
+ W I + KG+ C SYC EM P T+
Sbjct: 536 LSWTIW-IHALFSKGYEKEAC---------SYC------------IEMIEMDFMPQPDTF 573
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRF 344
+M L K + E A ITEK++ + ++ + F
Sbjct: 574 AKLMKGLKKLYNREFAGEITEKVRNMAAEREMSF 607
>sp|Q9LN22|PPR54_ARATH Pentatricopeptide repeat-containing protein At1g20300,
mitochondrial OS=Arabidopsis thaliana GN=At1g20300 PE=2
SV=1
Length = 537
Score = 171 bits (433), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 193/385 (50%), Gaps = 7/385 (1%)
Query: 117 ALGIFRWAGSCPGYEHSSE-IYEMMVDILGKVRQMDQMRALLEEMSKGHI-VTLNTIAKV 174
+L F WA S Y+H S Y M+D+ GKVRQ D L++ M ++ +++ T +
Sbjct: 133 SLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTIL 192
Query: 175 MRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIP 234
+RR+ AG +AV F+ + +G + ++++ L ++ + A+S F LK
Sbjct: 193 IRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFE 252
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYEL 294
P+ + + GWC+ + EA+ +EMK G P V +YS +I + CR S+ +++
Sbjct: 253 PDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDV 312
Query: 295 LDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGR 354
+M GC PN +T+ +M K+G E+ +++ +MK +G +PD+ +N LI R
Sbjct: 313 FADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCR 372
Query: 355 ASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNV 414
++ AV V M + + STFNT+ A + +M + + C+PN
Sbjct: 373 DENLENAVKVLNT-MIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAK-CEPNT 430
Query: 415 QTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLF 474
T++ L++ + TD L ++ +M +K + ++ TY L++ C AY LF
Sbjct: 431 VTYNILMRMFVGSKSTDMVL-KMKKEMDDK-EVEPNVNTYRLLVTMFCGMGHWNNAYKLF 488
Query: 475 KEMIGHD-ITPRYQTCRLILDEVKQ 498
KEM+ +TP ++L ++++
Sbjct: 489 KEMVEEKCLTPSLSLYEMVLAQLRR 513
>sp|Q0WP85|PP150_ARATH Pentatricopeptide repeat-containing protein At2g13420,
mitochondrial OS=Arabidopsis thaliana GN=At2g13420 PE=2
SV=1
Length = 509
Score = 170 bits (430), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 202/417 (48%), Gaps = 19/417 (4%)
Query: 84 FQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDI 143
F ++ N I + L+++ + R + + K AL F++ S P + + +++DI
Sbjct: 55 FHFMESSLQLNGISLTPNLIHQTLLRLRHNSKIALSFFQYLRSLPSPSTTPTSFNLIIDI 114
Query: 144 LGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNT 203
LG+VRQ D +R L+ EM + + T +++R AG AVR FD+ F +
Sbjct: 115 LGRVRQFDVVRQLIVEMDQ---TSPETFLILVKRLIAAGLTRQAVRAFDDAPCFLENRRF 171
Query: 204 ETM--NLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQ 261
+ LLDTLCK G ++A VF E K + + I I GWCK+ R+D A+ +
Sbjct: 172 RLVEFGFLLDTLCKYGYTKMAVGVFNERKEEFGSDEKVYTILIAGWCKLRRIDMAEKFLV 231
Query: 262 EMKGHGCHPCVISYSTIIQSYCR----------QYNFSKVYELLDEMQAQGCPPNVVTYT 311
EM G P V++Y+ ++ CR + N ++ DEM+ +G P+V +++
Sbjct: 232 EMIESGIEPNVVTYNVLLNGICRTASLHPEERFERNVRNAEKVFDEMRQRGIEPDVTSFS 291
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
V+ +++ E + + MK G P + ++ L R++EA + + M E
Sbjct: 292 IVLHMYSRAHKAELTLDKMKLMKAKGISPTIETYTSVVKCLCSCGRLEEAEELLET-MVE 350
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
+G++P ++T+N + A ++ +M K CKP+ QT++ LL + GK
Sbjct: 351 SGISPSSATYNCFFKEYKGRKDANGAMNLYRKM-KNGLCKPSTQTYNVLLGTFINLGKM- 408
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
E + ++ DD+ D+ +YT ++HGLC K + A F EMI P+ T
Sbjct: 409 ETVKEIWDDL-KASETGPDLDSYTSLVHGLCSKEKWKEACGYFVEMIERGFLPQKLT 464
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 128/320 (40%), Gaps = 53/320 (16%)
Query: 205 TMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
+ NL++D L + + ++ R + +E+ P TF I + R+ A T Q ++
Sbjct: 107 SFNLIIDILGRVRQFDVVRQLIVEMDQTSP---ETFLILV------KRLIAAGLTRQAVR 157
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
PC + R++ + LLD L K G +
Sbjct: 158 AFDDAPCFLEN--------RRFRLVEFGFLLDT-------------------LCKYGYTK 190
Query: 325 EAIRI-TEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNT 383
A+ + E+ + GS D + + LI + R+ A + VEM E+G+ P+ T+N
Sbjct: 191 MAVGVFNERKEEFGS--DEKVYTILIAGWCKLRRIDMAEK-FLVEMIESGIEPNVVTYNV 247
Query: 384 MITMFSHHG--HHEKAFH--------VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
++ H E+ F V +EM + +P+V +F +L + K +
Sbjct: 248 LLNGICRTASLHPEERFERNVRNAEKVFDEMRQ-RGIEPDVTSFSIVLHMYSRAHKAELT 306
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
L ++ ++ +S I TYT V+ LC + E A L + M+ I+P T
Sbjct: 307 LDKM--KLMKAKGISPTIETYTSVVKCLCSCGRLEEAEELLETMVESGISPSSATYNCFF 364
Query: 494 DEVKQKHMYDAAEKIEAVMK 513
E K + + A + MK
Sbjct: 365 KEYKGRKDANGAMNLYRKMK 384
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 101/229 (44%), Gaps = 9/229 (3%)
Query: 132 HSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTF 191
H E +E V KV D+MR +G + + + V+ +S A + E +
Sbjct: 259 HPEERFERNVRNAEKV--FDEMR------QRGIEPDVTSFSIVLHMYSRAHKAELTLDKM 310
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKI 250
+ G+ ET ++ LC G++E A + + +S I P++ T+N F +
Sbjct: 311 KLMKAKGISPTIETYTSVVKCLCSCGRLEEAEELLETMVESGISPSSATYNCFFKEYKGR 370
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
+ A ++MK C P +Y+ ++ ++ V E+ D+++A P++ +Y
Sbjct: 371 KDANGAMNLYRKMKNGLCKPSTQTYNVLLGTFINLGKMETVKEIWDDLKASETGPDLDSY 430
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
T+++ L ++EA +M G P F L L ++++++
Sbjct: 431 TSLVHGLCSKEKWKEACGYFVEMIERGFLPQKLTFETLYKGLIQSNKMR 479
Score = 41.6 bits (96), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/230 (18%), Positives = 98/230 (42%), Gaps = 7/230 (3%)
Query: 108 HRFKDDWKSALGIF---RWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGH 164
RF+ + ++A +F R G P S + M +D+M+ + +KG
Sbjct: 262 ERFERNVRNAEKVFDEMRQRGIEPDVTSFSIVLHMYSRAHKAELTLDKMKLM---KAKGI 318
Query: 165 IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARS 224
T+ T V++ G+ E+A + + G+ ++ T N A +
Sbjct: 319 SPTIETYTSVVKCLCSCGRLEEAEELLETMVESGISPSSATYNCFFKEYKGRKDANGAMN 378
Query: 225 VFLELKSCI-PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYC 283
++ ++K+ + P+ T+N+ + + + +++ + ++K P + SY++++ C
Sbjct: 379 LYRKMKNGLCKPSTQTYNVLLGTFINLGKMETVKEIWDDLKASETGPDLDSYTSLVHGLC 438
Query: 284 RQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
+ + + EM +G P +T+ T+ L +S R+ +K+
Sbjct: 439 SKEKWKEACGYFVEMIERGFLPQKLTFETLYKGLIQSNKMRTWRRLKKKL 488
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 166 bits (421), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 120/450 (26%), Positives = 222/450 (49%), Gaps = 18/450 (4%)
Query: 70 IISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWA--- 124
++ ++ V + +V ++ D + I P+ + ++ F ++ SAL + R
Sbjct: 187 VVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKH 246
Query: 125 GSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQ 183
G P +S IY+ ++ L K ++++ LLEEM G + T V+ +
Sbjct: 247 GCVP----NSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDR 302
Query: 184 WEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIF 243
+A + + + G + T L++ LCK G+V+ A+ +F + P FN
Sbjct: 303 INEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK---PEIVIFNTL 359
Query: 244 IHGWCKINRVDEAQWTIQEM-KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
IHG+ R+D+A+ + +M +G P V +Y+++I Y ++ E+L +M+ +G
Sbjct: 360 IHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKG 419
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
C PNV +YT ++ K G +EA + +M G KP++ FNCLI + R+ EAV
Sbjct: 420 CKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAV 479
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLK 422
+++ EMP G PD TFN++I+ + A +L +M E N T++ L+
Sbjct: 480 EIFR-EMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMIS-EGVVANTVTYNTLIN 537
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
+ + G+ E +L+++MV + LD TY +I GLCRA + + A LF++M+
Sbjct: 538 AFLRRGEIKEA-RKLVNEMVFQGS-PLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGH 595
Query: 483 TPRYQTCRLILDEVKQKHMYDAAEKIEAVM 512
P +C ++++ + + M + A + + M
Sbjct: 596 APSNISCNILINGLCRSGMVEEAVEFQKEM 625
Score = 157 bits (398), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 184/372 (49%), Gaps = 10/372 (2%)
Query: 116 SALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTI-AKV 174
+++ +F W GS GY HS ++Y++++ LG + + LL +M IV ++ +
Sbjct: 93 TSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISI 152
Query: 175 MRRFSGAGQWEDAVRTFDEL-GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-C 232
MR + AG R E+ + E ++ N++L+ L ++A +VF ++ S
Sbjct: 153 MRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRK 212
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
IPP TF + + +C +N +D A +++M HGC P + Y T+I S + ++
Sbjct: 213 IPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEAL 272
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
+LL+EM GC P+ T+ V+ L K EA ++ +M I G PD + L+ L
Sbjct: 273 QLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGL 332
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
+ RV A ++ +P+ P+ FNT+I F HG + A VL +M P
Sbjct: 333 CKIGRVDAAKDLFY-RIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVP 387
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
+V T++ L+ +K G L ++L DM NK ++ +YT+++ G C+ K + AY
Sbjct: 388 DVCTYNSLIYGYWKEGLVGLAL-EVLHDMRNK-GCKPNVYSYTILVDGFCKLGKIDEAYN 445
Query: 473 LFKEMIGHDITP 484
+ EM + P
Sbjct: 446 VLNEMSADGLKP 457
Score = 145 bits (366), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 188/380 (49%), Gaps = 12/380 (3%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAV 188
G+ Y +++ L K+ ++D + L + K IV NT+ + F G+ +DA
Sbjct: 317 GFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTL---IHGFVTHGRLDDAK 373
Query: 189 RTFDELGT-FGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIH 245
++ T +G+ + T N L+ KEG V LA V ++ K C PN +++ I +
Sbjct: 374 AVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGC-KPNVYSYTILVD 432
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G+CK+ ++DEA + EM G P + ++ +I ++C+++ + E+ EM +GC P
Sbjct: 433 GFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKP 492
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
+V T+ +++S L + + + A+ + M G ++ +N LI R ++EA +
Sbjct: 493 DVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLV 552
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
EM G D T+N++I G +KA + E+M + H N+ + L+
Sbjct: 553 N-EMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISC-NILINGLC 610
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
++G +E + + +MV + + DI T+ +I+GLCRA + E +F+++ I P
Sbjct: 611 RSGMVEEAV-EFQKEMVLRGS-TPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPD 668
Query: 486 YQTCRLILDEV-KQKHMYDA 504
T ++ + K +YDA
Sbjct: 669 TVTFNTLMSWLCKGGFVYDA 688
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 168/371 (45%), Gaps = 51/371 (13%)
Query: 97 QPSHYLVNKLIHRFK-----DDWKSALG-IFRWAGSCPGY-EHSSEIYEMMVDILGKVRQ 149
+P + N LIH F DD K+ L + G P ++S IY + L +
Sbjct: 350 KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGL-- 407
Query: 150 MDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLL 209
+ L + +KG + + ++ F G+ ++A +E+ GL+ NT N L
Sbjct: 408 --ALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCL 465
Query: 210 LDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG 267
+ CKE ++ A +F E+ K C P+ +TFN I G C+++ + A W +++M G
Sbjct: 466 ISAFCKEHRIPEAVEIFREMPRKGC-KPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG 524
Query: 268 CHPCVISYSTII-----------------------------------QSYCRQYNFSKVY 292
++Y+T+I + CR K
Sbjct: 525 VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKAR 584
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
L ++M G P+ ++ +++ L +SG EEA+ ++M + GS PD FN LI L
Sbjct: 585 SLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGL 644
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
RA R+++ + +++ ++ G+ PDT TFNT+++ G A +L+E + + P
Sbjct: 645 CRAGRIEDGLTMFR-KLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIE-DGFVP 702
Query: 413 NVQTFHPLLKS 423
N +T+ LL+S
Sbjct: 703 NHRTWSILLQS 713
Score = 92.8 bits (229), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 139/278 (50%), Gaps = 10/278 (3%)
Query: 81 DEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWK--SALGIFRWAGSCPGYEHSSEIYE 138
DE + L + + ++P+ N LI F + + A+ IFR P ++Y
Sbjct: 441 DEAYNVLNE-MSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFR---EMPRKGCKPDVYT 496
Query: 139 M--MVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
++ L +V ++ LL +M S+G + T ++ F G+ ++A + +E+
Sbjct: 497 FNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV 556
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVD 254
G + T N L+ LC+ G+V+ ARS+F + L+ P+ + NI I+G C+ V+
Sbjct: 557 FQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVE 616
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA +EM G P +++++++I CR + ++QA+G PP+ VT+ T+M
Sbjct: 617 EAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLM 676
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
S+L K G +A + ++ G P+ R ++ L+ ++
Sbjct: 677 SWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSI 714
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 76/151 (50%), Gaps = 2/151 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ L + ++D+ R+L E+M + GH + + ++ +G E+AV E+
Sbjct: 567 YNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMV 626
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVD 254
G + T N L++ LC+ G++E ++F +L++ IPP+ TFN + CK V
Sbjct: 627 LRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVY 686
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQ 285
+A + E G P ++S ++QS Q
Sbjct: 687 DACLLLDEGIEDGFVPNHRTWSILLQSIIPQ 717
>sp|Q9SSR6|PPR78_ARATH Pentatricopeptide repeat-containing protein At1g52640,
mitochondrial OS=Arabidopsis thaliana GN=At1g52640 PE=2
SV=1
Length = 523
Score = 163 bits (412), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 120/460 (26%), Positives = 219/460 (47%), Gaps = 16/460 (3%)
Query: 62 PRLPDIDVIISKV---HVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSAL 118
P PD+ IS+V H +D L+ V + + S LV +++ R K+ A
Sbjct: 32 PPSPDLVNEISRVLSDHRNPKDD-----LEHTLVAYSPRVSSNLVEQVLKRCKNLGFPAH 86
Query: 119 GIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNT--IAKVMR 176
F WA P + HS E Y ++V+ILG +Q + L E + + +++ V R
Sbjct: 87 RFFLWARRIPDFAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFR 146
Query: 177 RFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPP 235
+S A +A R F+ + FG++ + ++ LL +LC + V A+ F + K I P
Sbjct: 147 AYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVP 206
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
+A T++I + GW +I A+ EM C +++Y+ ++ + C+ + Y++
Sbjct: 207 SAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMF 266
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
EM G P+ ++ + +GD A ++ ++MK P+ FN +I TL +
Sbjct: 267 QEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKN 326
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQ 415
+V +A Y+ EM + G PDT T+N+++ H +A +L M++ + C P+
Sbjct: 327 EKVDDA-YLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTK-CLPDRH 384
Query: 416 TFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCR-ANKCEWAYLLF 474
T++ +LK + G+ D +++ + M + + TYT++IHGL R K E A F
Sbjct: 385 TYNMVLKLLIRIGRFDRA-TEIWEGMSERKFYPT-VATYTVMIHGLVRKKGKLEEACRYF 442
Query: 475 KEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
+ MI I P T ++ + + D + + M++
Sbjct: 443 EMMIDEGIPPYSTTVEMLRNRLVGWGQMDVVDVLAGKMER 482
>sp|Q9C9A2|PP112_ARATH Pentatricopeptide repeat-containing protein At1g71060,
mitochondrial OS=Arabidopsis thaliana GN=At1g71060 PE=2
SV=1
Length = 510
Score = 159 bits (402), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 105/427 (24%), Positives = 217/427 (50%), Gaps = 18/427 (4%)
Query: 95 AIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMR 154
+++ S L+ +++ + + AL +F+WA + G++H++ Y +++ LGK++Q +
Sbjct: 89 SVKLSPALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIW 148
Query: 155 ALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLC 214
+L+++M +++ T A + RR++ A + ++A+ F ++ FG + + N +LDTL
Sbjct: 149 SLVDDMKAKKLLSKETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLS 208
Query: 215 KEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCK---INRVDEAQWTIQEMKGHGCHP 270
K V A+ VF ++K P+ ++ I + GW + + RVDE +EMK G P
Sbjct: 209 KSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVN---REMKDEGFEP 265
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRIT 330
V++Y II ++C+ + + +EM+ + C P+ + ++++ L +A+
Sbjct: 266 DVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFF 325
Query: 331 EKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSH 390
E+ K G ++ +N L+ + R+++A Y EM GV P+ T++ ++
Sbjct: 326 ERSKSSGFPLEAPTYNALVGAYCWSQRMEDA-YKTVDEMRLKGVGPNARTYDIILHHLIR 384
Query: 391 HGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLD 450
++A+ V + M+ C+P V T+ +++ + D + ++ D+M K L
Sbjct: 385 MQRSKEAYEVYQTMS----CEPTVSTYEIMVRMFCNKERLDMAI-KIWDEMKGKGVLP-G 438
Query: 451 ITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT-PRYQTCRL---ILDEVKQKHMYDAAE 506
+ ++ +I LC NK + A F EM+ I P + RL +LDE ++ + D
Sbjct: 439 MHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVV 498
Query: 507 KIEAVMK 513
K++ + K
Sbjct: 499 KMDRLRK 505
>sp|Q9S7R4|PP125_ARATH Pentatricopeptide repeat-containing protein At1g74900,
mitochondrial OS=Arabidopsis thaliana GN=OTP43 PE=2 SV=1
Length = 482
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 197/398 (49%), Gaps = 9/398 (2%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSC-PGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM 160
LVN ++ R + AL F + + Y H + +++ +DI ++ + +L+ M
Sbjct: 58 LVNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRM 117
Query: 161 SKGHI-VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV 219
I + T A V R++ AG+ + AV+ F + G ++ + N +LD LCK +V
Sbjct: 118 RSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRV 177
Query: 220 ELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
E A +F L+ + T+N+ ++GWC I R +A ++EM G +P + +Y+T++
Sbjct: 178 EKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTML 237
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
+ + R +E EM+ + C +VVTYTTV+ +G+ + A + ++M G
Sbjct: 238 KGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVL 297
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
P +N +I L + V+ AV +++ EM G P+ +T+N +I H G +
Sbjct: 298 PSVATYNAMIQVLCKKDNVENAVVMFE-EMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEE 356
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIH 459
+++ M E C+PN QT++ +++ + + ++ L L + M + L ++ TY ++I
Sbjct: 357 LMQRMEN-EGCEPNFQTYNMMIRYYSECSEVEKALG-LFEKMGSGDCLP-NLDTYNILIS 413
Query: 460 GLCRANKCE---WAYLLFKEMIGHDITPRYQTCRLILD 494
G+ + E A L EM+ PR T +L+
Sbjct: 414 GMFVRKRSEDMVVAGKLLLEMVERGFIPRKFTFNRVLN 451
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 121/262 (46%), Gaps = 3/262 (1%)
Query: 148 RQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN 207
R + L E + +G L T +++ F AGQ A F E+ E + T
Sbjct: 210 RTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYT 269
Query: 208 LLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
++ G+++ AR+VF E+ + + P+ T+N I CK + V+ A +EM
Sbjct: 270 TVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRR 329
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
G P V +Y+ +I+ FS+ EL+ M+ +GC PN TY ++ Y ++ + E+A
Sbjct: 330 GYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKA 389
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV--EMPENGVAPDTSTFNTM 384
+ + EKM P+ +N LI + R ++ V ++ EM E G P TFN +
Sbjct: 390 LGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVERGFIPRKFTFNRV 449
Query: 385 ITMFSHHGHHEKAFHVLEEMNK 406
+ G+ A +L +K
Sbjct: 450 LNGLLLTGNQAFAKEILRLQSK 471
Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 114/242 (47%), Gaps = 6/242 (2%)
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
S+ I R + V+ L+ M++ P+ T+ V A +G ++A+++ M
Sbjct: 93 SFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNM 152
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
G D FN ++ L ++ RV++A +++ V DT T+N ++ +
Sbjct: 153 HEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSV--DTVTYNVILNGWCLIKR 210
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
KA VL+EM + PN+ T++ +LK F+ G+ L+ + K +D+ T
Sbjct: 211 TPKALEVLKEMVE-RGINPNLTTYNTMLKGFFRAGQIRHAWEFFLE--MKKRDCEIDVVT 267
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEAVM 512
YT V+HG A + + A +F EMI + P T ++ + K+ ++ +A E ++
Sbjct: 268 YTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMV 327
Query: 513 KK 514
++
Sbjct: 328 RR 329
>sp|O81908|PPR2_ARATH Pentatricopeptide repeat-containing protein At1g02060,
chloroplastic OS=Arabidopsis thaliana GN=At1g02060 PE=2
SV=2
Length = 710
Score = 156 bits (394), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 117/434 (26%), Positives = 195/434 (44%), Gaps = 66/434 (15%)
Query: 117 ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALL---EEMSKGHIVTLNT-IA 172
L F W S G+ H + + +M++ LG+ R ++ R L E S G + +
Sbjct: 84 GLRFFDWV-SNKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFN 142
Query: 173 KVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC 232
++R + AG ++++V+ F + G+ + T N LL L K G+ +A +F E++
Sbjct: 143 SLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRT 202
Query: 233 --IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSK 290
+ P+++TFN I+G+CK + VDEA ++M+ + C+P V++Y+TII CR
Sbjct: 203 YGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKI 262
Query: 291 VYELLDEM--QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
+ +L M +A PNVV+YTT++ + +EA+ + M G KP++ +N L
Sbjct: 263 AHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTL 322
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGV----APDTSTFNTMITMFSHHGHHEKAFHVLEEM 404
I L A R E + + + N APD TFN +I GH + A V +EM
Sbjct: 323 IKGLSEAHRYDE---IKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEM 379
Query: 405 --------------------------------NKL---------EHCKPNVQTFHPLLKS 423
N+L + CKP ++P+ +
Sbjct: 380 LNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEY 439
Query: 424 CFKTGKT---DECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH 480
GKT ++ QL+ V D +Y +I G CR K + AY L M+
Sbjct: 440 LCANGKTKQAEKVFRQLMKRGVQ------DPPSYKTLITGHCREGKFKPAYELLVLMLRR 493
Query: 481 DITPRYQTCRLILD 494
+ P +T L++D
Sbjct: 494 EFVPDLETYELLID 507
Score = 69.3 bits (168), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 130/317 (41%), Gaps = 38/317 (11%)
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--------KSC 232
AG + A++ F E+ L ++ + ++L+ TLC + + A ++F EL K
Sbjct: 366 AGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDE 425
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
P A +N C + +A+ +++ G SY T+I +CR+ F Y
Sbjct: 426 CKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPP-SYKTLITGHCREGKFKPAY 484
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
ELL M + P++ TY ++ L K G+ A ++M P + F+ ++ L
Sbjct: 485 ELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAEL 544
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
+ E+ + + M E + + ++ + EKAF ++
Sbjct: 545 AKRKFANESFCLVTL-MLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVR---------- 593
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDD--MVNKHHLSL---------DITTYTLVIHGL 461
LL K +E L L ++ +++ H L L DI T VI GL
Sbjct: 594 -------LLYDNGYLVKMEELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGL 646
Query: 462 CRANKCEWAYLLFKEMI 478
C+ + A+ L+ E++
Sbjct: 647 CKHKRHSEAFSLYNELV 663
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 96/229 (41%), Gaps = 10/229 (4%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTF 240
G+ + A + F +L G++ + + L+ C+EGK + A + L L+ P+ T+
Sbjct: 444 GKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETY 502
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
+ I G KI A T+Q M P ++ +++ ++ ++ + L+ M
Sbjct: 503 ELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLE 562
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
+ N+ T V+ L S E+A I + D+ + + LG ++
Sbjct: 563 KRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLY------DNGYLVKMEELLGYLCENRK 616
Query: 361 AVYVYQVEM--PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKL 407
+ + + + E D T NT+I H H +AF + E+ +L
Sbjct: 617 LLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVEL 665
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 155 bits (393), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 115/422 (27%), Positives = 203/422 (48%), Gaps = 9/422 (2%)
Query: 95 AIQPSHYLVNKLIHRFKDDWKSAL-GIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQM 153
++P + N++++ D L I S G + + +++ L + Q+
Sbjct: 149 GLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPA 208
Query: 154 RALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDT 212
+LE+M S G + T VM+ + G + A+R +++ FG + ++N+++
Sbjct: 209 ILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHG 268
Query: 213 LCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHP 270
CKEG+VE A + E+ + P+ +TFN ++G CK V A + M G P
Sbjct: 269 FCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDP 328
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRIT 330
V +Y+++I C+ + E+LD+M + C PN VTY T++S L K EEA +
Sbjct: 329 DVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELA 388
Query: 331 EKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSH 390
+ G PD FN LI L + A+ +++ EM G PD T+N +I
Sbjct: 389 RVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFE-EMRSKGCEPDEFTYNMLIDSLCS 447
Query: 391 HGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLD 450
G ++A ++L++M +L C +V T++ L+ K KT E ++ D+M H +S +
Sbjct: 448 KGKLDEALNMLKQM-ELSGCARSVITYNTLIDGFCKANKTREA-EEIFDEM-EVHGVSRN 504
Query: 451 ITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP-RYQTCRLILDEVKQKHMYDAAEKIE 509
TY +I GLC++ + E A L +MI P +Y L+ + + AA+ ++
Sbjct: 505 SVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQ 564
Query: 510 AV 511
A+
Sbjct: 565 AM 566
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 117/482 (24%), Positives = 214/482 (44%), Gaps = 85/482 (17%)
Query: 109 RFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTL 168
R + D +AL +F A P + +YE ++ LG+ D M+ +LE+M
Sbjct: 58 RSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMG 117
Query: 169 NTIAKVMRRFSGAGQWEDAVRT-----FDELG---------------------------- 195
+ ++ + +D + + DE G
Sbjct: 118 TSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISH 177
Query: 196 ----TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTF---------- 240
+G++ + T N+L+ LC+ ++ A + ++ S + P+ TF
Sbjct: 178 AKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEE 237
Query: 241 -------------------------NIFIHGWCKINRVDEAQWTIQEMKGH-GCHPCVIS 274
N+ +HG+CK RV++A IQEM G P +
Sbjct: 238 GDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYT 297
Query: 275 YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
++T++ C+ + E++D M +G P+V TY +V+S L K G+ +EA+ + ++M
Sbjct: 298 FNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMI 357
Query: 335 IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHH 394
P++ +N LI TL + ++V+EA + +V + G+ PD TFN++I +H
Sbjct: 358 TRDCSPNTVTYNTLISTLCKENQVEEATELARV-LTSKGILPDVCTFNSLIQGLCLTRNH 416
Query: 395 EKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS---LDI 451
A + EEM + + C+P+ T++ L+ S GK DE L +M+ + LS +
Sbjct: 417 RVAMELFEEM-RSKGCEPDEFTYNMLIDSLCSKGKLDEAL-----NMLKQMELSGCARSV 470
Query: 452 TTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEA 510
TY +I G C+ANK A +F EM H ++ T ++D + K + + DAA+ ++
Sbjct: 471 ITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQ 530
Query: 511 VM 512
++
Sbjct: 531 MI 532
Score = 145 bits (366), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 113/460 (24%), Positives = 209/460 (45%), Gaps = 50/460 (10%)
Query: 99 SHYLVNKLIHRFKDDWK--SALGIFRWAGSCPGYEHSSEIYEMMVDIL---GKVR-QMDQ 152
S+ VN ++H F + + AL + + G+ + +V+ L G V+ ++
Sbjct: 258 SNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEI 317
Query: 153 MRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDT 212
M +L+E + T N++ + + G+ ++AV D++ T NT T N L+ T
Sbjct: 318 MDVMLQEGYDPDVYTYNSVISGLCKL---GEVKEAVEVLDQMITRDCSPNTVTYNTLIST 374
Query: 213 LCKEGKVE-----------------------------------LARSVFLELKS-CIPPN 236
LCKE +VE +A +F E++S P+
Sbjct: 375 LCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPD 434
Query: 237 AHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLD 296
T+N+ I C ++DEA +++M+ GC VI+Y+T+I +C+ + E+ D
Sbjct: 435 EFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFD 494
Query: 297 EMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRAS 356
EM+ G N VTY T++ L KS E+A ++ ++M + G KPD +N L+ R
Sbjct: 495 EMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGG 554
Query: 357 RVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQT 416
+++A + Q M NG PD T+ T+I+ G E A +L + +++
Sbjct: 555 DIKKAADIVQA-MTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSI-QMKGINLTPHA 612
Query: 417 FHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCR-ANKCEWAYLLFK 475
++P+++ F+ KT E ++ L +M+ ++ D +Y +V GLC A
Sbjct: 613 YNPVIQGLFRKRKTTEAIN-LFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLV 671
Query: 476 EMIGHDITPRYQTCRLILDEVKQKHMYDAAEK-IEAVMKK 514
E++ P + + ++ + + M + K + VM+K
Sbjct: 672 ELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQK 711
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 155 bits (392), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 113/402 (28%), Positives = 196/402 (48%), Gaps = 17/402 (4%)
Query: 109 RFKDDWKSA--LGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHI 165
R K+A L I +G+ P Y +M+ K +++ ++L+ MS +
Sbjct: 149 RLGKTRKAAKILEILEGSGAVP----DVITYNVMISGYCKAGEINNALSVLDRMSVSPDV 204
Query: 166 VTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSV 225
VT NTI +R +G+ + A+ D + + T +L++ C++ V A +
Sbjct: 205 VTYNTI---LRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKL 261
Query: 226 FLELK--SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYC 283
E++ C P + T+N+ ++G CK R+DEA + +M GC P VI+++ I++S C
Sbjct: 262 LDEMRDRGCTP-DVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMC 320
Query: 284 RQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSR 343
+ +LL +M +G P+VVT+ ++++L + G AI I EKM G +P+S
Sbjct: 321 STGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSL 380
Query: 344 FFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEE 403
+N L++ + ++ A+ Y M G PD T+NTM+T G E A +L +
Sbjct: 381 SYNPLLHGFCKEKKMDRAIE-YLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439
Query: 404 MNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCR 463
++ + C P + T++ ++ K GKT + + +LLD+M K L D TY+ ++ GL R
Sbjct: 440 LSS-KGCSPVLITYNTVIDGLAKAGKTGKAI-KLLDEMRAK-DLKPDTITYSSLVGGLSR 496
Query: 464 ANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
K + A F E I P T I+ + + D A
Sbjct: 497 EGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRA 538
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 169/313 (53%), Gaps = 11/313 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKG---HIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++V+ + K ++D+ L +M S G +++T N I +R G+W DA +
Sbjct: 277 YNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNII---LRSMCSTGRWMDAEKLLA 333
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKIN 251
++ G + T N+L++ LC++G + A + ++ + PN+ ++N +HG+CK
Sbjct: 334 DMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEK 393
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
++D A ++ M GC+P +++Y+T++ + C+ E+L+++ ++GC P ++TY
Sbjct: 394 KMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYN 453
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPE 371
TV+ LAK+G +AI++ ++M+ KPD+ ++ L+ L R +V EA+ + E
Sbjct: 454 TVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFH-EFER 512
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
G+ P+ TFN+++ ++A L M CKPN ++ L++ G
Sbjct: 513 MGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMIN-RGCKPNETSYTILIEGLAYEGMAK 571
Query: 432 ECLSQLLDDMVNK 444
E L +LL+++ NK
Sbjct: 572 EAL-ELLNELCNK 583
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 165/346 (47%), Gaps = 6/346 (1%)
Query: 163 GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELA 222
G++ + ++R F G+ A + + L G + T N+++ CK G++ A
Sbjct: 132 GNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNA 191
Query: 223 RSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSY 282
SV + + P+ T+N + C ++ +A + M C+P VI+Y+ +I++
Sbjct: 192 LSVLDRMS--VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEAT 249
Query: 283 CRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDS 342
CR +LLDEM+ +GC P+VVTY +++ + K G +EAI+ M G +P+
Sbjct: 250 CRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNV 309
Query: 343 RFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLE 402
N ++ ++ R +A + +M G +P TFN +I G +A +LE
Sbjct: 310 ITHNIILRSMCSTGRWMDAEKLL-ADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILE 368
Query: 403 EMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC 462
+M + C+PN +++PLL K K D + + L+ MV++ DI TY ++ LC
Sbjct: 369 KMPQ-HGCQPNSLSYNPLLHGFCKEKKMDRAI-EYLERMVSRGCYP-DIVTYNTMLTALC 425
Query: 463 RANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+ K E A + ++ +P T ++D + + A K+
Sbjct: 426 KDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKL 471
Score = 115 bits (288), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 136/281 (48%), Gaps = 8/281 (2%)
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYEL 294
P+ I G+C++ + +A ++ ++G G P VI+Y+ +I YC+ + +
Sbjct: 135 PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSV 194
Query: 295 LDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGR 354
LD M P+VVTY T++ L SG ++A+ + ++M PD + LI R
Sbjct: 195 LDRMSVS---PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCR 251
Query: 355 ASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNV 414
S V A+ + EM + G PD T+N ++ G ++A L +M C+PNV
Sbjct: 252 DSGVGHAMKLLD-EMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPS-SGCQPNV 309
Query: 415 QTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLF 474
T + +L+S TG+ + +LL DM+ K S + T+ ++I+ LCR A +
Sbjct: 310 ITHNIILRSMCSTGRWMDA-EKLLADMLRK-GFSPSVVTFNILINFLCRKGLLGRAIDIL 367
Query: 475 KEMIGHDITPRYQTCRLILDEV-KQKHMYDAAEKIEAVMKK 514
++M H P + +L K+K M A E +E ++ +
Sbjct: 368 EKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR 408
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 126/275 (45%), Gaps = 19/275 (6%)
Query: 41 IESYCSDGARLDHHQVLCVD------SPRLPDIDVIIS----KVHVGSSEDEVFQSLKQD 90
+ S CS G +D ++L D SP + +++I+ K +G + D + + + Q
Sbjct: 316 LRSMCSTGRWMDAEKLL-ADMLRKGFSPSVVTFNILINFLCRKGLLGRAID-ILEKMPQ- 372
Query: 91 HVCNAIQPSHYLVNKLIHRFKDDWKSALGI-FRWAGSCPGYEHSSEIYEMMVDILGKVRQ 149
H C QP+ N L+H F + K I + G Y M+ L K +
Sbjct: 373 HGC---QPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGK 429
Query: 150 MDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNL 208
++ +L ++S KG L T V+ + AG+ A++ DE+ L+ +T T +
Sbjct: 430 VEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSS 489
Query: 209 LLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG 267
L+ L +EGKV+ A F E + I PNA TFN + G CK + D A + M G
Sbjct: 490 LVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRG 549
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
C P SY+ +I+ + + ELL+E+ +G
Sbjct: 550 CKPNETSYTILIEGLAYEGMAKEALELLNELCNKG 584
>sp|Q9SZ20|PP339_ARATH Pentatricopeptide repeat-containing protein At4g26800
OS=Arabidopsis thaliana GN=At4g26800 PE=2 SV=2
Length = 514
Score = 152 bits (384), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 105/405 (25%), Positives = 201/405 (49%), Gaps = 8/405 (1%)
Query: 114 WKSALGIFRWAGSCPGYEHSSEIY--EMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNT 170
+ + +++ + G E S ++Y ++V+ + Q + L +M K G + T
Sbjct: 101 YDVVINLWKRIENAEGIEISPDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVT 160
Query: 171 IAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK 230
+ ++ F + +DAV ++ G++++ +L+DTLCK V A V +K
Sbjct: 161 ASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMK 220
Query: 231 S-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFS 289
I PN T++ I G CK R+ +A+ + EM +P VI++S +I +Y ++ S
Sbjct: 221 DRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLS 280
Query: 290 KVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
KV + M PNV TY++++ L +EAI++ + M G P+ ++ L
Sbjct: 281 KVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLA 340
Query: 350 YTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH 409
++SRV + + + +MP+ GVA +T + NT+I + G + A V M
Sbjct: 341 NGFFKSSRVDDGIKLLD-DMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTS-NG 398
Query: 410 CKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEW 469
PN+++++ +L F G+ ++ LS+ + + K LDI TYT++IHG+C+A +
Sbjct: 399 LIPNIRSYNIVLAGLFANGEVEKALSRF--EHMQKTRNDLDIITYTIMIHGMCKACMVKE 456
Query: 470 AYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
AY LF ++ + P ++ +++ E+ + M A+ + +K
Sbjct: 457 AYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADALNRFYQK 501
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 147/319 (46%), Gaps = 6/319 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
G + + +++D L K R + +L+ M +G + T + ++ +G+ DA
Sbjct: 188 GIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADA 247
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHG 246
R E+ + + N T + L+D K GK+ SV+ + ++ I PN T++ I+G
Sbjct: 248 ERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYG 307
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C NRVDEA + M GC P V++YST+ + + +LLD+M +G N
Sbjct: 308 LCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAAN 367
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
V+ T++ ++G + A+ + M G P+ R +N ++ L V++A+ ++
Sbjct: 368 TVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFE 427
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
M + D T+ MI ++A+ + ++ K + +P+ + + ++ +
Sbjct: 428 -HMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKL-KFKRVEPDFKAYTIMIAELNR 485
Query: 427 TGKTDECLSQLLDDMVNKH 445
G E + L+ KH
Sbjct: 486 AGMRTE--ADALNRFYQKH 502
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 109/288 (37%), Gaps = 75/288 (26%)
Query: 273 ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE-------- 324
I Y +++S F + L M P++V + V++ +AK ++
Sbjct: 51 IDYREVLRSGLHNIKFDDAFHLFVLMAYSYPLPSIVEFNKVLTAIAKMQMYDVVINLWKR 110
Query: 325 ----EAIRITE--------------------------KMKIVGSKPDSRFFNCLIYTLGR 354
E I I+ KM +G +PD + L+
Sbjct: 111 IENAEGIEISPDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCL 170
Query: 355 ASRVQEAVYVY-QVE---------------------------------MPENGVAPDTST 380
++ +++AVYV Q+E M + G++P+ T
Sbjct: 171 SNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVT 230
Query: 381 FNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDD 440
++++IT G A L EM+ + PNV TF L+ + K GK + S +
Sbjct: 231 YSSLITGLCKSGRLADAERRLHEMDS-KKINPNVITFSALIDAYAKRGKLSKVDS--VYK 287
Query: 441 MVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
M+ + + ++ TY+ +I+GLC N+ + A + MI TP T
Sbjct: 288 MMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVT 335
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 152 bits (383), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 112/410 (27%), Positives = 204/410 (49%), Gaps = 18/410 (4%)
Query: 83 VFQSLKQDH-VCNAIQPSHYLVNKLIHRFK--DDWKSALGIFRWAGSCPGYEHSSEIYEM 139
VF+SL++ + +C + LV K R D S + + + G PG + + +
Sbjct: 119 VFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDA 178
Query: 140 MVDILGKVRQMDQM-RALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
+ + + + + +LE ++ T N + +R F AG + A+ FD++ T G
Sbjct: 179 TIRSKRNISFAENVFKEMLESQVSPNVFTYNIL---IRGFCFAGNIDVALTLFDKMETKG 235
Query: 199 LEKNTETMNLLLDTLCKEGKVE----LARSVFLELKSCIPPNAHTFNIFIHGWCKINRVD 254
N T N L+D CK K++ L RS+ L+ + PN ++N+ I+G C+ R+
Sbjct: 236 CLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALK---GLEPNLISYNVVINGLCREGRMK 292
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
E + + EM G ++Y+T+I+ YC++ NF + + EM G P+V+TYT+++
Sbjct: 293 EVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLI 352
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
+ K+G+ A+ ++M++ G P+ R + L+ + + EA V + EM +NG
Sbjct: 353 HSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLR-EMNDNGF 411
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
+P T+N +I G E A VLE+M K + P+V ++ +L ++ DE L
Sbjct: 412 SPSVVTYNALINGHCVTGKMEDAIAVLEDM-KEKGLSPDVVSYSTVLSGFCRSYDVDEAL 470
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
++ +MV K + D TY+ +I G C + + A L++EM+ + P
Sbjct: 471 -RVKREMVEK-GIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPP 518
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/401 (26%), Positives = 188/401 (46%), Gaps = 54/401 (13%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
G E + Y ++++ L + +M ++ +L EM++ G+ + T +++ + G + A
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQA 329
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHG 246
+ E+ GL + T L+ ++CK G + A +++ + PN T+ + G
Sbjct: 330 LVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDG 389
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
+ + ++EA ++EM +G P V++Y+ +I +C +L++M+ +G P+
Sbjct: 390 FSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPD 449
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
VV+Y+TV+S +S D +EA+R+ +M G KPD+ ++ LI R +EA +Y+
Sbjct: 450 VVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYE 509
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEM-------------------NK- 406
EM G+ PD T+ +I + G EKA + EM NK
Sbjct: 510 -EMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQ 568
Query: 407 --------------LEHCKPNVQTFHPLLKSC----FKT-----------GKTDECLSQL 437
E P+ T+H L+++C FK+ G E Q+
Sbjct: 569 SRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEA-DQV 627
Query: 438 LDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMI 478
+ M+ K+H D T Y ++IHG CRA AY L+KEM+
Sbjct: 628 FESMLGKNH-KPDGTAYNIMIHGHCRAGDIRKAYTLYKEMV 667
Score = 132 bits (332), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 168/354 (47%), Gaps = 42/354 (11%)
Query: 198 GLEKNTETMNLLLD-TLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDE 255
G + N +LD T+ + + A +VF E L+S + PN T+NI I G+C +D
Sbjct: 164 GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDV 223
Query: 256 AQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMS 315
A +M+ GC P V++Y+T+I YC+ ++LL M +G PN+++Y V++
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283
Query: 316 YL-----------------------------------AKSGDFEEAIRITEKMKIVGSKP 340
L K G+F +A+ + +M G P
Sbjct: 284 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP 343
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
+ LI+++ +A + A+ +M G+ P+ T+ T++ FS G+ +A+ V
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFLD-QMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRV 402
Query: 401 LEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHG 460
L EMN P+V T++ L+ TGK ++ ++ +L+DM K LS D+ +Y+ V+ G
Sbjct: 403 LREMND-NGFSPSVVTYNALINGHCVTGKMEDAIA-VLEDMKEK-GLSPDVVSYSTVLSG 459
Query: 461 LCRANKCEWAYLLFKEMIGHDITPRYQT-CRLILDEVKQKHMYDAAEKIEAVMK 513
CR+ + A + +EM+ I P T LI +Q+ +A + E +++
Sbjct: 460 FCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLR 513
Score = 132 bits (332), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 115/426 (26%), Positives = 205/426 (48%), Gaps = 25/426 (5%)
Query: 70 IISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIF---RWA 124
I SK ++ +E+ VF+ + + V P+ + N LI F + AL +F
Sbjct: 180 IRSKRNISFAEN-VFKEMLESQV----SPNVFTYNILIRGFCFAGNIDVALTLFDKMETK 234
Query: 125 GSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQ 183
G P + Y ++D K+R++D LL M+ KG L + V+ G+
Sbjct: 235 GCLP----NVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGR 290
Query: 184 WEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNI 242
++ E+ G + T N L+ CKEG A + E L+ + P+ T+
Sbjct: 291 MKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTS 350
Query: 243 FIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
IH CK ++ A + +M+ G P +Y+T++ + ++ ++ Y +L EM G
Sbjct: 351 LIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNG 410
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
P+VVTY +++ +G E+AI + E MK G PD ++ ++ R+ V EA+
Sbjct: 411 FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEAL 470
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLK 422
V + EM E G+ PDT T++++I F ++A + EEM ++ P+ T+ L+
Sbjct: 471 RVKR-EMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRV-GLPPDEFTYTALIN 528
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWA-----YLLFKEM 477
+ G ++ L QL ++MV K L D+ TY+++I+GL + ++ A L ++E
Sbjct: 529 AYCMEGDLEKAL-QLHNEMVEKGVLP-DVVTYSVLINGLNKQSRTREAKRLLLKLFYEES 586
Query: 478 IGHDIT 483
+ D+T
Sbjct: 587 VPSDVT 592
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 149/355 (41%), Gaps = 52/355 (14%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDA 187
G S Y ++ + K M++ L++M +G T ++ FS G +A
Sbjct: 340 GLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEA 399
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHG 246
R E+ G + T N L++ C GK+E A +V ++K + P+ +++ + G
Sbjct: 400 YRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSG 459
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
+C+ VDEA +EM G P I+YS++IQ +C Q + +L +EM G PP+
Sbjct: 460 FCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPD 519
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV-- 364
TYT +++ GD E+A+++ +M G PD ++ LI L + SR +EA +
Sbjct: 520 EFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLL 579
Query: 365 ---YQVEMPENGV--------------------------------------------APD 377
Y+ +P + PD
Sbjct: 580 KLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPD 639
Query: 378 TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDE 432
+ +N MI G KA+ + +EM K V T L+K+ K GK +E
Sbjct: 640 GTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTV-TVIALVKALHKEGKVNE 693
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 192/380 (50%), Gaps = 13/380 (3%)
Query: 133 SSEIYEMMVDILGKVRQMDQMRALLEEMSKGH----IVTLNTIAKVMRRFSGAGQWEDAV 188
S + E++ + L + ++D L +M K IV N K++ + ++E +
Sbjct: 47 SGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFN---KLLSAVAKMNKFELVI 103
Query: 189 RTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGW 247
+++ T G+ + T ++ ++ C+ ++ LA +V ++ K P+ T + ++G+
Sbjct: 104 SLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGY 163
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
C R+ +A + +M G P +++T+I S+ L+D+M +GC P++
Sbjct: 164 CHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDL 223
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
VTY TV++ L K GD + A+ + KM+ K + FN +I +L + V+ AV ++
Sbjct: 224 VTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLF-T 282
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKT 427
EM G+ P+ T+N++I ++G A +L M + + PNV TF+ L+ + FK
Sbjct: 283 EMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLE-KKINPNVVTFNALIDAFFKE 341
Query: 428 GKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
GK E +L ++M+ + + D TY L+I+G C N+ + A +FK M+ D P Q
Sbjct: 342 GKLVEA-EKLHEEMIQR-SIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQ 399
Query: 488 TCRLILDEV-KQKHMYDAAE 506
T +++ K K + D E
Sbjct: 400 TYNTLINGFCKCKRVEDGVE 419
Score = 133 bits (334), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 182/368 (49%), Gaps = 8/368 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
G H Y + ++ + Q+ A+L +M K G+ + T++ ++ + + + DA
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIH 245
V D++ G + +T T L+ L K A ++ ++ + C P+ T+ ++
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGC-QPDLVTYGTVVN 231
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G CK +D A + +M+ V+ ++TII S C+ + +L EM+ +G P
Sbjct: 232 GLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRP 291
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
NVVTY ++++ L G + +A R+ M P+ FN LI + ++ EA ++
Sbjct: 292 NVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLH 351
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
+ EM + + PDT T+N +I F H ++A + + M + C PN+QT++ L+
Sbjct: 352 E-EMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVS-KDCLPNIQTYNTLINGFC 409
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
K + ++ + +L +M ++ L + TYT +I G +A C+ A ++FK+M+ + +
Sbjct: 410 KCKRVEDGV-ELFREM-SQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTD 467
Query: 486 YQTCRLIL 493
T ++L
Sbjct: 468 IMTYSILL 475
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 156/358 (43%), Gaps = 50/358 (13%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEM-SKG---HIVTLNTIAKVMRRFSGAGQWEDAVRTF 191
I+ ++D L K R ++ L EM +KG ++VT N++ + + G+W DA R
Sbjct: 260 IFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNY---GRWSDASRLL 316
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKI 250
+ + N T N L+D KEGK+ A + E+ + I P+ T+N+ I+G+C
Sbjct: 317 SNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMH 376
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
NR+DEA+ + M C P + +Y+T+I +C+ EL EM +G N VTY
Sbjct: 377 NRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTY 436
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
TT++ ++GD + A + + +M
Sbjct: 437 TTIIQGFFQAGDCDSAQMVFK------------------------------------QMV 460
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKT 430
N V D T++ ++ +G + A + + + K E + N+ ++ +++ K GK
Sbjct: 461 SNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEM-ELNIFIYNTMIEGMCKAGKV 519
Query: 431 DECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
E D+ + D+ TY +I GLC + A LF++M P T
Sbjct: 520 GEAW-----DLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGT 572
Score = 113 bits (282), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/388 (23%), Positives = 181/388 (46%), Gaps = 9/388 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
GY+ + + ++ L + + AL+++M +G L T V+ G + A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHG 246
+ +++ ++ N N ++D+LCK VE+A +F E+++ I PN T+N I+
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C R +A + M +P V++++ +I ++ ++ + +L +EM + P+
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
+TY +++ +EA ++ + M P+ + +N LI + RV++ V +++
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFR 422
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
EM + G+ +T T+ T+I F G + A V ++M ++ T+ LL
Sbjct: 423 -EMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVS-NRVPTDIMTYSILLHGLCS 480
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
GK D L ++ + K + L+I Y +I G+C+A K A+ LF + I P
Sbjct: 481 YGKLDTAL--VIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDV 535
Query: 487 QTCRLILDEVKQKHMYDAAEKIEAVMKK 514
T ++ + K + A+ + MK+
Sbjct: 536 VTYNTMISGLCSKRLLQEADDLFRKMKE 563
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 125/265 (47%), Gaps = 9/265 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++++ ++D+ + + + M SK + + T ++ F + ED V F E+
Sbjct: 366 YNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMS 425
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVD 254
GL NT T ++ + G + A+ VF ++ S +P + T++I +HG C ++D
Sbjct: 426 QRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLD 485
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
A + ++ + Y+T+I+ C+ KV E D + P+VVTY T++
Sbjct: 486 TALVIFKYLQKSEMELNIFIYNTMIEGMCKA---GKVGEAWDLFCSLSIKPDVVTYNTMI 542
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI-YTLGRASRVQEAVYVYQVEMPENG 373
S L +EA + KMK G+ P+S +N LI L R A + EM +G
Sbjct: 543 SGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIK--EMRSSG 600
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAF 398
D ST +++T H G +K+F
Sbjct: 601 FVGDASTI-SLVTNMLHDGRLDKSF 624
>sp|Q8L844|PP413_ARATH Pentatricopeptide repeat-containing protein At5g42310,
mitochondrial OS=Arabidopsis thaliana GN=At5g42310 PE=2
SV=1
Length = 709
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 178/356 (50%), Gaps = 17/356 (4%)
Query: 81 DEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKD-----DWKSALGIFRWAGSCPGYEHSSE 135
+ +F+ L+Q + I+P N L+ + D +S + G P EH+
Sbjct: 324 EALFEELRQ----SGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPD-EHT-- 376
Query: 136 IYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTI-AKVMRRFSGAGQWEDAVRTFDEL 194
Y +++D + + R +L+EM G + + + ++++ F G+W+ + E+
Sbjct: 377 -YSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEM 435
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRV 253
+ G++ + + N+++DT K ++ A + F + S I P+ T+N I CK R
Sbjct: 436 KSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRH 495
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
A+ + M+ GC PC +Y+ +I SY Q + + LL +M++QG PNVVT+TT+
Sbjct: 496 IVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTL 555
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
+ KSG F +AI E+MK VG KP S +N LI + ++AV ++V M +G
Sbjct: 556 VDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRV-MTSDG 614
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
+ P N++I F +AF VL+ M K KP+V T+ L+K+ + K
Sbjct: 615 LKPSLLALNSLINAFGEDRRDAEAFAVLQYM-KENGVKPDVVTYTTLMKALIRVDK 669
Score = 122 bits (306), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 87/388 (22%), Positives = 182/388 (46%), Gaps = 8/388 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQ--MRALLEEMSKGHI-VTLNTIAKVMRRFSGAGQWE 185
GY+ Y +++ L + ++D + L +E+ + + + + + ++ F+ +G
Sbjct: 227 GYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPS 286
Query: 186 DAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFI 244
A++ GL T T+ ++ L G+ A ++F EL+ S I P +N +
Sbjct: 287 KALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALL 346
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
G+ K + +A+ + EM+ G P +YS +I +Y + +L EM+A
Sbjct: 347 KGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQ 406
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
PN ++ +++ G++++ ++ ++MK +G KPD +F+N +I T G+ + + A+
Sbjct: 407 PNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTT 466
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
+ M G+ PD T+NT+I HG H A + E M + C P T++ ++ S
Sbjct: 467 FD-RMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMER-RGCLPCATTYNIMINSY 524
Query: 425 FKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
+ D+ + +LL M ++ L ++ T+T ++ ++ + A +EM + P
Sbjct: 525 GDQERWDD-MKRLLGKMKSQGILP-NVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKP 582
Query: 485 RYQTCRLILDEVKQKHMYDAAEKIEAVM 512
+++ Q+ + + A VM
Sbjct: 583 SSTMYNALINAYAQRGLSEQAVNAFRVM 610
Score = 89.4 bits (220), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 144/342 (42%), Gaps = 58/342 (16%)
Query: 59 VDSPRLPDIDVIISKVHV-GSSEDEVFQSLKQDHVCNA-----------------IQPSH 100
V + L D + ++S++ G S DE SL D NA +QP+
Sbjct: 350 VKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNS 409
Query: 101 YLVNKLIHRFKD--DWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLE 158
++ ++L+ F+D +W+ + + S G + + Y +++D GK +D +
Sbjct: 410 FVFSRLLAGFRDRGEWQKTFQVLKEMKSI-GVKPDRQFYNVVIDTFGKFNCLDHAMTTFD 468
Query: 159 EM-SKG--------------------HIVTLNTIAKVMRR---------------FSGAG 182
M S+G HIV + RR +
Sbjct: 469 RMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQE 528
Query: 183 QWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFN 241
+W+D R ++ + G+ N T L+D K G+ A E+KS + P++ +N
Sbjct: 529 RWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYN 588
Query: 242 IFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQ 301
I+ + + ++A + M G P +++ +++I ++ ++ + +L M+
Sbjct: 589 ALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKEN 648
Query: 302 GCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSR 343
G P+VVTYTT+M L + F++ + E+M + G KPD +
Sbjct: 649 GVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRK 690
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 135/332 (40%), Gaps = 50/332 (15%)
Query: 220 ELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
+L + L K + P T+N I + N +++A I +M+ G ++YS +I
Sbjct: 182 KLYEAFLLSQKQTLTP--LTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVI 239
Query: 280 QSYCRQYNF-------------------------------------SKVYELLDEMQAQG 302
QS R SK +LL QA G
Sbjct: 240 QSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATG 299
Query: 303 CPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
T +++S LA SG EA + E+++ G KP +R +N L+ + +++A
Sbjct: 300 LSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAE 359
Query: 363 YVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLK 422
+ EM + GV+PD T++ +I + + G E A VL+EM + +PN F LL
Sbjct: 360 SMVS-EMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGD-VQPNSFVFSRLLA 417
Query: 423 SCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
G+ + Q+L +M + D Y +VI + N + A F M+ I
Sbjct: 418 GFRDRGEWQKTF-QVLKEM-KSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGI 475
Query: 483 TPRYQTCRLILD-------EVKQKHMYDAAEK 507
P T ++D + + M++A E+
Sbjct: 476 EPDRVTWNTLIDCHCKHGRHIVAEEMFEAMER 507
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 107/254 (42%), Gaps = 46/254 (18%)
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
C + YS +I + R K+YE Q Q P +TY ++ A++ D E+A+
Sbjct: 163 CFSYELLYSILIHALGRS---EKLYEAFLLSQKQTLTP--LTYNALIGACARNNDIEKAL 217
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY--VYQVEMPENGVAPDTSTFNTMI 385
+ KM+ G + D ++ +I +L R++++ + +Y+ E+ + + D N +I
Sbjct: 218 NLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYK-EIERDKLELDVQLVNDII 276
Query: 386 TMFSHHGHHEKAFHVL-----------------------------------EEMNKLEHC 410
F+ G KA +L EE+ +
Sbjct: 277 MGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQ-SGI 335
Query: 411 KPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWA 470
KP + ++ LLK KTG + S + + + K +S D TY+L+I A + E A
Sbjct: 336 KPRTRAYNALLKGYVKTGPLKDAESMVSE--MEKRGVSPDEHTYSLLIDAYVNAGRWESA 393
Query: 471 YLLFKEMIGHDITP 484
++ KEM D+ P
Sbjct: 394 RIVLKEMEAGDVQP 407
>sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810
OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1
Length = 659
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/455 (23%), Positives = 202/455 (44%), Gaps = 67/455 (14%)
Query: 117 ALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVM 175
AL F+ + ++H+ +E+M+ L Q+D ++ LL++M +G + + V+
Sbjct: 59 ALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVI 118
Query: 176 RRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK-SCIP 234
+ G E AV F + FG + + + N +LDTL E ++++ V+ ++K
Sbjct: 119 SVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFE 178
Query: 235 PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQS------------- 281
PN T+N+ + CK N+VD A+ + EM GC P +SY+T+I S
Sbjct: 179 PNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL 238
Query: 282 -----------------YCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
C+++++ +EL+ EM +G PNV++Y+T+++ L SG E
Sbjct: 239 AERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIE 298
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTM 384
A +M G P+ + L+ +A+ ++ + G+ P+ +NT+
Sbjct: 299 LAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTL 358
Query: 385 ITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL---------- 434
+ F HG+ KA V M ++ C PN++T+ L+ K G D +
Sbjct: 359 VQGFCSHGNIVKAVSVFSHMEEI-GCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSG 417
Query: 435 -----------------------SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAY 471
++ L ++++K + + + T+ I GLC A + +WA
Sbjct: 418 CCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAE 477
Query: 472 LLFKEM-IGHDITPRYQTCRLILDEVKQKHMYDAA 505
+F++M H P T +LD + + + + A
Sbjct: 478 KVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEA 512
Score = 129 bits (325), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 118/449 (26%), Positives = 208/449 (46%), Gaps = 30/449 (6%)
Query: 71 ISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCP 128
+S V SS EV + + +P + N LI+ + D+K A + R
Sbjct: 217 VSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVE-K 275
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK----GHIVTLNTIAK--VMR--RFSG 180
G + Y ++++L Q++ + L +M K +I TL+++ K +R F
Sbjct: 276 GISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDA 335
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAH 238
W +R F GL+ N N L+ C G + A SVF +E C PN
Sbjct: 336 LDLWNQMIRGF------GLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGC-SPNIR 388
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
T+ I+G+ K +D A + +M GC P V+ Y+ ++++ CR F + L++ M
Sbjct: 389 TYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIM 448
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIV-GSKPDSRFFNCLIYTLGRASR 357
+ C P+V T+ + L +G + A ++ +M+ P+ +N L+ L +A+R
Sbjct: 449 SKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANR 508
Query: 358 VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTF 417
++EA Y E+ GV +ST+NT++ + G A ++ +M ++ P+ T
Sbjct: 509 IEEA-YGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKM-MVDGKSPDEITM 566
Query: 418 HPLLKSCFKTGKTDECLSQLLDDM-VNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKE 476
+ ++ + K GK + +Q+LD + + D+ +YT VI GLCR+N E +L +
Sbjct: 567 NMIILAYCKQGKAERA-AQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLER 625
Query: 477 MIGHDITPRYQTCRL-----ILDEVKQKH 500
MI I P T + ILD++ + H
Sbjct: 626 MISAGIVPSIATWSVLINCFILDDIVRAH 654
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 148 bits (374), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 118/431 (27%), Positives = 208/431 (48%), Gaps = 21/431 (4%)
Query: 82 EVFQSLKQDHVCNAIQPSHYLVNKLIHRFK-----DDWKSALGIFRWAGSCPGYEHSSEI 136
E+F+ L++ N P Y N +I + D+ S L R GS P S
Sbjct: 294 EMFEHLEK----NRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIP----SVIA 345
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGT 196
Y ++ L K+ ++D+ + EEM K L+T ++ AG+ + A D +
Sbjct: 346 YNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQK 405
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIHGWCKINRVD 254
GL N T+N+++D LCK K++ A ++F E+ K C P + TF I G K+ RVD
Sbjct: 406 AGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTP-DEITFCSLIDGLGKVGRVD 464
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
+A ++M C I Y+++I+++ +++ +M Q C P++ T M
Sbjct: 465 DAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYM 524
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
+ K+G+ E+ + E++K PD+R ++ LI+ L +A E ++ M E G
Sbjct: 525 DCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELF-YSMKEQGC 583
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
DT +N +I F G KA+ +LEEM K + +P V T+ ++ K + DE
Sbjct: 584 VLDTRAYNIVIDGFCKCGKVNKAYQLLEEM-KTKGFEPTVVTYGSVIDGLAKIDRLDE-- 640
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
+ +L + + L++ Y+ +I G + + + AYL+ +E++ +TP T +LD
Sbjct: 641 AYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLD 700
Query: 495 E-VKQKHMYDA 504
VK + + +A
Sbjct: 701 ALVKAEEINEA 711
Score = 128 bits (322), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 182/412 (44%), Gaps = 41/412 (9%)
Query: 140 MVDILGKVRQMDQMRALLEEMSKGHIVTLNTI-AKVMRRFSGAGQWEDAVRTFDELGTFG 198
++D LGKV ++D + E+M T + + +++ F G+ ED + + ++
Sbjct: 453 LIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQN 512
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQ 257
+ + +N +D + K G+ E R++F E+K+ P+A +++I IHG K +E
Sbjct: 513 CSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETY 572
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
MK GC +Y+ +I +C+ +K Y+LL+EM+ +G P VVTY +V+ L
Sbjct: 573 ELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGL 632
Query: 318 AK-----------------------------------SGDFEEAIRITEKMKIVGSKPDS 342
AK G +EA I E++ G P+
Sbjct: 633 AKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNL 692
Query: 343 RFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLE 402
+N L+ L +A + EA+ +Q M E P+ T+ +I KAF +
Sbjct: 693 YTWNSLLDALVKAEEINEALVCFQ-SMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQ 751
Query: 403 EMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC 462
EM K + KP+ ++ ++ K G E + L D + D Y +I GL
Sbjct: 752 EMQK-QGMKPSTISYTTMISGLAKAGNIAE--AGALFDRFKANGGVPDSACYNAMIEGLS 808
Query: 463 RANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
N+ A+ LF+E + +TC ++LD + + + A + AV+++
Sbjct: 809 NGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRE 860
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 181/416 (43%), Gaps = 8/416 (1%)
Query: 95 AIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMR 154
+ +P V ++ R KD A+ FRW H E Y ++ ++ + R D +
Sbjct: 60 SFKPQPEFVIGVLRRLKD-VNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALD 118
Query: 155 ALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTL 213
+L EMS G ++NT +++ A + + + F L+
Sbjct: 119 QILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAF 178
Query: 214 CKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCV 272
++ ++F +++ P H F I G+ K RVD A + EMK +
Sbjct: 179 SAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADI 238
Query: 273 ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEK 332
+ Y+ I S+ + ++ E++A G P+ VTYT+++ L K+ +EA+ + E
Sbjct: 239 VLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEH 298
Query: 333 MKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
++ P + +N +I G A + EA + + + + G P +N ++T G
Sbjct: 299 LEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAK-GSIPSVIAYNCILTCLRKMG 357
Query: 393 HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
++A V EEM K PN+ T++ L+ + GK D L D + K L ++
Sbjct: 358 KVDEALKVFEEMKK--DAAPNLSTYNILIDMLCRAGKLDTAFE--LRDSMQKAGLFPNVR 413
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
T +++ LC++ K + A +F+EM TP T ++D + + D A K+
Sbjct: 414 TVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKV 469
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 162/378 (42%), Gaps = 5/378 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVM-RRFSGAGQWEDA 187
G + Y M+ +L K ++D+ + E + K V M + AG++++A
Sbjct: 268 GLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEA 327
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGW 247
+ G + N +L L K GKV+ A VF E+K PN T+NI I
Sbjct: 328 YSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDML 387
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
C+ ++D A M+ G P V + + ++ C+ + + +EM + C P+
Sbjct: 388 CRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDE 447
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
+T+ +++ L K G ++A ++ EKM + +S + LI R ++ +Y+
Sbjct: 448 ITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYK- 506
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKT 427
+M +PD NT + G EK + EE+ K P+ +++ L+ K
Sbjct: 507 DMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEI-KARRFVPDARSYSILIHGLIKA 565
Query: 428 GKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
G +E +L M + LD Y +VI G C+ K AY L +EM P
Sbjct: 566 GFANETY-ELFYSM-KEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVV 623
Query: 488 TCRLILDEVKQKHMYDAA 505
T ++D + + D A
Sbjct: 624 TYGSVIDGLAKIDRLDEA 641
Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 166/341 (48%), Gaps = 7/341 (2%)
Query: 33 SHIVSSSPIESYCSDGARLDHHQVL--CVDSPRLPDIDVIISKVH--VGSSEDEVFQSLK 88
+ IV +S I+++ + G + D H++ ++ PD+ ++ + + + E E +++
Sbjct: 481 NSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMF 540
Query: 89 QDHVCNAIQPSHYLVNKLIHRF-KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKV 147
++ P + LIH K + + ++ G + Y +++D K
Sbjct: 541 EEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKC 600
Query: 148 RQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETM 206
++++ LLEEM +KG T+ T V+ + + ++A F+E + +E N
Sbjct: 601 GKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIY 660
Query: 207 NLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKG 265
+ L+D K G+++ A + EL + + PN +T+N + K ++EA Q MK
Sbjct: 661 SSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKE 720
Query: 266 HGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEE 325
C P ++Y +I C+ F+K + EMQ QG P+ ++YTT++S LAK+G+ E
Sbjct: 721 LKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAE 780
Query: 326 AIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
A + ++ K G PDS +N +I L +R +A +++
Sbjct: 781 AGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFE 821
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 174/375 (46%), Gaps = 23/375 (6%)
Query: 158 EEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEG 217
E + +G I +T +KV+ A + E A F+E+ GL + T +++D+ CK G
Sbjct: 473 EMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAG 532
Query: 218 KVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYS 276
+E AR F E++ PN T+ IH + K +V A + M GC P +++YS
Sbjct: 533 LIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYS 592
Query: 277 TIIQSYCRQYNFSKVYELLDEM-QAQGCP---------------PNVVTYTTVMSYLAKS 320
+I +C+ K ++ + M ++ P PNVVTY ++ KS
Sbjct: 593 ALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKS 652
Query: 321 GDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTST 380
EEA ++ + M + G +P+ ++ LI L + ++ EA V + EM E+G T
Sbjct: 653 HRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV-KTEMSEHGFPATLYT 711
Query: 381 FNTMITMFSHHGHHEKAFHVLEEMNKLEH-CKPNVQTFHPLLKSCFKTGKTDECLSQLLD 439
++++I + + A VL +M LE+ C PNV + ++ K GKTDE L
Sbjct: 712 YSSLIDRYFKVKRQDLASKVLSKM--LENSCAPNVVIYTEMIDGLCKVGKTDEAYK--LM 767
Query: 440 DMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQK 499
M+ + ++ TYT +I G K E L + M + P Y T R+++D +
Sbjct: 768 QMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKN 827
Query: 500 HMYDAAEKIEAVMKK 514
D A + MK+
Sbjct: 828 GALDVAHNLLEEMKQ 842
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 183/409 (44%), Gaps = 56/409 (13%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL- 194
Y ++ K +++ L E M S+G + + T + ++ AGQ E A + F+ +
Sbjct: 556 YTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMC 615
Query: 195 GTFGL----------EKNTETMNL-----LLDTLCKEGKVELARSVF--LELKSCIPPNA 237
G+ + + N+E N+ LLD CK +VE AR + + ++ C PN
Sbjct: 616 GSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGC-EPNQ 674
Query: 238 HTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDE 297
++ I G CK+ ++DEAQ EM HG + +YS++I Y + ++L +
Sbjct: 675 IVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSK 734
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
M C PNVV YT ++ L K G +EA ++ + M+ G +P+ + +I G +
Sbjct: 735 MLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGK 794
Query: 358 VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTF 417
++ + + + M GVAP+ T+ +I +G + A ++LEEM K H + +
Sbjct: 795 IETCLELLE-RMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM-KQTHWPTHTAGY 852
Query: 418 HPLLKSCFK-----TGKTDE-----------CLSQLLDDMVNKHHLSLDI---------- 451
+++ K G DE L+D+++ L + +
Sbjct: 853 RKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFS 912
Query: 452 -------TTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT-CRLI 492
+TY +I LC ANK E A+ LF EM + P Q+ C LI
Sbjct: 913 ATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLI 961
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 112/477 (23%), Positives = 205/477 (42%), Gaps = 34/477 (7%)
Query: 47 DGARLDHHQVLCVDSPRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQP-SHYLVNK 105
D ++ HQV+ + + D I V S D+VF Q + + S LV +
Sbjct: 81 DYGNVNVHQVVPIITQSSIDARAIADAV---SGVDDVFGRKSQKFLRQFREKLSESLVIE 137
Query: 106 LIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQM--RALLEEMSKG 163
++ R + + F WAG GY+H++ +Y +VD++ VR D+ L+++
Sbjct: 138 VL-RLIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLI--VRDDDEKVPEEFLQQIRDD 194
Query: 164 HIVTLNTIAKVM-RRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELA 222
V+ R+ G + A+ L F + T N L+ K +++ A
Sbjct: 195 DKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSA 254
Query: 223 RSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQS 281
+ E+ + + + T F + CK+ + EA T+ E + P + Y+ +I
Sbjct: 255 SLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREA-LTLVETENF--VPDTVFYTKLISG 311
Query: 282 YCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPD 341
C F + + L+ M+A C PNVVTY+T++ R+ M + G P
Sbjct: 312 LCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPS 371
Query: 342 SRFFNCLIYTLGRASRVQEAVYVYQV--EMPENGVAPDTSTFNTMITMFSHHGHH----- 394
+ FN L++ + + Y Y++ +M + G P +N +I
Sbjct: 372 PKIFNSLVHAYCTSG---DHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDL 428
Query: 395 ----EKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLD 450
EKA+ + + + K NV +F L S GK ++ S ++ +M+ + + D
Sbjct: 429 LDLAEKAYSEMLAAGVVLN-KINVSSFTRCLCS---AGKYEKAFS-VIREMIGQGFIP-D 482
Query: 451 ITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEK 507
+TY+ V++ LC A+K E A+LLF+EM + T +++D + + + A K
Sbjct: 483 TSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARK 539
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 151/324 (46%), Gaps = 10/324 (3%)
Query: 124 AGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAG 182
A S G E + +Y+ ++D L KV ++D+ + + EMS+ G TL T + ++ R+
Sbjct: 664 AMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVK 723
Query: 183 QWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTF 240
+ + A + ++ N ++D LCK GK + A + +E K C PN T+
Sbjct: 724 RQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGC-QPNVVTY 782
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
I G+ I +++ ++ M G P ++Y +I C+ + LL+EM+
Sbjct: 783 TAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQ 842
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
P + Y V+ K +F E++ + +++ + P + LI L +A R++
Sbjct: 843 THWPTHTAGYRKVIEGFNK--EFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEM 900
Query: 361 AVYVYQVEMPENGVAPD-TSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
A+ + + + D +ST+N++I E AF + EM K + P +Q+F
Sbjct: 901 ALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTK-KGVIPEMQSFCS 959
Query: 420 LLKSCFKTGKTDECLSQLLDDMVN 443
L+K F+ K E L LL D ++
Sbjct: 960 LIKGLFRNSKISEAL--LLLDFIS 981
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 80/184 (43%), Gaps = 10/184 (5%)
Query: 125 GSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVT-LNTIAKVMRRFSGAGQ 183
G P Y Y +++D K +D LLEEM + H T KV+ F+ +
Sbjct: 809 GVAPNYV----TYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--E 862
Query: 184 WEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL---KSCIPPNAHTF 240
+ +++ DE+G LL+D L K ++E+A + E+ + + + T+
Sbjct: 863 FIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTY 922
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
N I C N+V+ A EM G P + S+ ++I+ R S+ LLD +
Sbjct: 923 NSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISH 982
Query: 301 QGCP 304
CP
Sbjct: 983 MVCP 986
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 188/377 (49%), Gaps = 12/377 (3%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ L K + MD+ +L M K G + T ++ + +GQ ++A+ ++
Sbjct: 234 YNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMR 293
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
+ G+E + T +LL+D LCK G+ AR +F + K + P T+ + G+ +
Sbjct: 294 SDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALV 353
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
E + M +G HP +S +I +Y +Q + + +M+ QG PN VTY V+
Sbjct: 354 EMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVI 413
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL---GRASRVQEAVYVYQVEMPE 371
L KSG E+A+ E+M G P + +N LI+ L + R +E + +EM +
Sbjct: 414 GILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELI----LEMLD 469
Query: 372 NGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTD 431
G+ +T FN++I G ++ + E M ++ KPNV T++ L+ GK D
Sbjct: 470 RGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRI-GVKPNVITYNTLINGYCLAGKMD 528
Query: 432 ECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRL 491
E + +LL MV+ L + TY+ +I+G C+ ++ E A +LFKEM ++P T +
Sbjct: 529 EAM-KLLSGMVSVG-LKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNI 586
Query: 492 ILDEVKQKHMYDAAEKI 508
IL + Q AA+++
Sbjct: 587 ILQGLFQTRRTAAAKEL 603
Score = 135 bits (340), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 112/470 (23%), Positives = 223/470 (47%), Gaps = 15/470 (3%)
Query: 46 SDGARLDHHQVLCVDSPRLPDI---DVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYL 102
SD A +H++L D LPD+ + II+ + + D+ + L V N + P
Sbjct: 212 SDKAYSTYHEML--DRGILPDVVTYNSIIAALCKAQAMDKAMEVLNT-MVKNGVMPDCMT 268
Query: 103 VNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEM 160
N ++H + K A+G + S G E Y +++D L K + + R + + M
Sbjct: 269 YNSILHGYCSSGQPKEAIGFLKKMRS-DGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSM 327
Query: 161 SK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV 219
+K G + T +++ ++ G + D + G+ + ++L+ K+GKV
Sbjct: 328 TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKV 387
Query: 220 ELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTI 278
+ A VF +++ + PNA T+ I CK RV++A ++M G P I Y+++
Sbjct: 388 DQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSL 447
Query: 279 IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
I C + + EL+ EM +G N + + +++ K G E+ ++ E M +G
Sbjct: 448 IHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGV 507
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
KP+ +N LI A ++ EA+ + M G+ P+T T++T+I + E A
Sbjct: 508 KPNVITYNTLINGYCLAGKMDEAMKLLS-GMVSVGLKPNTVTYSTLINGYCKISRMEDAL 566
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
+ +EM P++ T++ +L+ F+T +T ++ L + + ++++TY +++
Sbjct: 567 VLFKEMES-SGVSPDIITYNIILQGLFQTRRT--AAAKELYVRITESGTQIELSTYNIIL 623
Query: 459 HGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
HGLC+ + A +F+ + D+ +T +++D + + D A+ +
Sbjct: 624 HGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDL 673
Score = 119 bits (299), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 161/338 (47%), Gaps = 15/338 (4%)
Query: 155 ALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDA----VRTFDELGTFGLEKNTETMNLLL 210
AL + KG V +++ + DA +R ELG N + N+LL
Sbjct: 109 ALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCI---PNVFSYNILL 165
Query: 211 DTLCKEGK----VELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
LC E + +EL + + PP+ ++ I+G+ K D+A T EM
Sbjct: 166 KGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDR 225
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
G P V++Y++II + C+ K E+L+ M G P+ +TY +++ SG +EA
Sbjct: 226 GILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEA 285
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
I +KM+ G +PD ++ L+ L + R EA ++ M + G+ P+ +T+ T++
Sbjct: 286 IGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFD-SMTKRGLKPEITTYGTLLQ 344
Query: 387 MFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHH 446
++ G + +L+ M + P+ F L+ + K GK D+ + L+ + +
Sbjct: 345 GYATKGALVEMHGLLDLMVR-NGIHPDHYVFSILICAYAKQGKVDQAM--LVFSKMRQQG 401
Query: 447 LSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
L+ + TY VI LC++ + E A L F++MI ++P
Sbjct: 402 LNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSP 439
Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 136/278 (48%), Gaps = 11/278 (3%)
Query: 209 LLDTLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHG 267
+++ KEG + A S + E L I P+ T+N I CK +D+A + M +G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG 261
Query: 268 CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAI 327
P ++Y++I+ YC + L +M++ G P+VVTY+ +M YL K+G EA
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEAR 321
Query: 328 RITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITM 387
+I + M G KP+ + L+ + E + + M NG+ PD F+ +I
Sbjct: 322 KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDL-MVRNGIHPDHYVFSILICA 380
Query: 388 FSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL---SQLLDDMVNK 444
++ G ++A V +M + + PN T+ ++ K+G+ ++ + Q++D+ ++
Sbjct: 381 YAKQGKVDQAMLVFSKMRQ-QGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSP 439
Query: 445 HHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDI 482
++ Y +IHGLC NK E A L EM+ I
Sbjct: 440 GNI-----VYNSLIHGLCTCNKWERAEELILEMLDRGI 472
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 169/368 (45%), Gaps = 18/368 (4%)
Query: 156 LLEEMSKGHIVTLN-TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTE---TMNLLLD 211
LL I LN +A V R A AV ++ + G ++ T T +L+
Sbjct: 41 LLRRGRGASIYGLNRALADVARDSPAA-----AVSRYNRMARAGADEVTPDLCTYGILIG 95
Query: 212 TLCKEGKVELARSVFLE-LKSCIPPNAHTFNIFIHGWCKINRVDEA-QWTIQEMKGHGCH 269
C+ G+++L + +K +A F + G C R +A ++ M GC
Sbjct: 96 CCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCI 155
Query: 270 PCVISYSTIIQSYCRQYNFSKVYELLDEM---QAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
P V SY+ +++ C + + ELL M + G PP+VV+YTTV++ K GD ++A
Sbjct: 156 PNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKA 215
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
+M G PD +N +I L +A + +A+ V M +NGV PD T+N+++
Sbjct: 216 YSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNT-MVKNGVMPDCMTYNSILH 274
Query: 387 MFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHH 446
+ G ++A L++M + + +P+V T+ L+ K G+ E ++ D M K
Sbjct: 275 GYCSSGQPKEAIGFLKKM-RSDGVEPDVVTYSLLMDYLCKNGRCMEA-RKIFDSMT-KRG 331
Query: 447 LSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAE 506
L +ITTY ++ G + L M+ + I P + +++ ++ D A
Sbjct: 332 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAM 391
Query: 507 KIEAVMKK 514
+ + M++
Sbjct: 392 LVFSKMRQ 399
Score = 56.6 bits (135), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 110/260 (42%), Gaps = 4/260 (1%)
Query: 149 QMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN 207
+MD+ LL M S G T + ++ + + EDA+ F E+ + G+ + T N
Sbjct: 526 KMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYN 585
Query: 208 LLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
++L L + + A+ +++ + +S T+NI +HG CK D+A Q +
Sbjct: 586 IILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLM 645
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
+++ +I + + + +L + G PN TY + + G EE
Sbjct: 646 DLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEEL 705
Query: 327 IRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMIT 386
++ M+ G DS N ++ L + + A Y + E + + ST + I
Sbjct: 706 DQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA-GTYLSMIDEKHFSLEASTASLFID 764
Query: 387 MFSHHGHHEKAFHVLEEMNK 406
+ S G +++ + L E K
Sbjct: 765 LLS-GGKYQEYYRFLPEKYK 783
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 18/208 (8%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKG---HIVTLNTIAKVM---RRFSGA 181
G + ++ Y +++ K+ +M+ L +EM S G I+T N I + + RR + A
Sbjct: 541 GLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAA 600
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCI---PPNAH 238
+ + + G + T N++L LCK + A +F L C+ A
Sbjct: 601 KEL------YVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNL--CLMDLKLEAR 652
Query: 239 TFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM 298
TFNI I K+ R DEA+ +G P +Y + ++ Q ++ +L M
Sbjct: 653 TFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSM 712
Query: 299 QAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
+ GC + ++ L + G+ A
Sbjct: 713 EDNGCTVDSGMLNFIVRELLQRGEITRA 740
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 145 bits (366), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 122/464 (26%), Positives = 206/464 (44%), Gaps = 52/464 (11%)
Query: 65 PDIDVIISKVHVGSSEDEVFQS--LKQDHVCNAIQPSHYLVNKLIHRF--KDDWKSALGI 120
PD+ ++V +E +S L Q + P+ N ++H + K +K+A+ +
Sbjct: 191 PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIEL 250
Query: 121 FRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI----VTLNTIAKVMR 176
S G + Y M++ L + ++ + LL +M K I VT NT+ +
Sbjct: 251 LDHMKS-KGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTL---IN 306
Query: 177 RFSGAGQWEDAVRTFDELGTFGLEKNTETMN----------------------------- 207
FS G+ A + +E+ +FGL N T N
Sbjct: 307 GFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTP 366
Query: 208 ------LLLDTLCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTI 260
+LLD LCK + +LAR ++ +K + + T+ I G CK +DEA +
Sbjct: 367 SEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLL 426
Query: 261 QEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKS 320
EM G P +++YS +I +C+ F E++ + G PN + Y+T++ +
Sbjct: 427 NEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRM 486
Query: 321 GDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTST 380
G +EAIRI E M + G D FN L+ +L +A +V EA + M +G+ P+T +
Sbjct: 487 GCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRC-MTSDGILPNTVS 545
Query: 381 FNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDD 440
F+ +I + + G KAF V +EM K+ H P T+ LLK K G E ++
Sbjct: 546 FDCLINGYGNSGEGLKAFSVFDEMTKVGH-HPTFFTYGSLLKGLCKGGHLRE--AEKFLK 602
Query: 441 MVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
++ ++D Y ++ +C++ A LF EM+ I P
Sbjct: 603 SLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILP 646
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/415 (24%), Positives = 192/415 (46%), Gaps = 26/415 (6%)
Query: 115 KSALGIFRWAGSCPGYE--HSSEIYEMMVDILGKVRQMDQMRALLEEMSK---------G 163
K AL +W PG E H ++ + IL + R D R +L+E+S G
Sbjct: 51 KLALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVFG 110
Query: 164 HIVTLNTIAK--------VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK 215
++T + ++R + G +D++ F +G +G + T N +L ++ K
Sbjct: 111 ALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVK 170
Query: 216 EGKVELARSVFLE--LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI 273
G+ +++ FL+ LK I P+ TFNI I+ C +++ + +Q+M+ G P ++
Sbjct: 171 SGE-DVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIV 229
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKM 333
+Y+T++ YC++ F ELLD M+++G +V TY ++ L +S + + M
Sbjct: 230 TYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM 289
Query: 334 KIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGH 393
+ P+ +N LI +V A + EM G++P+ TFN +I G+
Sbjct: 290 RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLN-EMLSFGLSPNHVTFNALIDGHISEGN 348
Query: 394 HEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITT 453
++A + M + + P+ ++ LL K + D L++ + ++ + + T
Sbjct: 349 FKEALKMFYMM-EAKGLTPSEVSYGVLLDGLCKNAEFD--LARGFYMRMKRNGVCVGRIT 405
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
YT +I GLC+ + A +L EM I P T +++ + + A++I
Sbjct: 406 YTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEI 460
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/410 (23%), Positives = 178/410 (43%), Gaps = 42/410 (10%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHI--------VTLNTIAKVMRRFSGA------- 181
Y M+D L K +D+ LL EMSK I +N KV RF A
Sbjct: 406 YTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKV-GRFKTAKEIVCRI 464
Query: 182 ----------------------GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV 219
G ++A+R ++ + G ++ T N+L+ +LCK GKV
Sbjct: 465 YRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKV 524
Query: 220 ELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTI 278
A + S I PN +F+ I+G+ +A EM G HP +Y ++
Sbjct: 525 AEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSL 584
Query: 279 IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
++ C+ + + + L + A + V Y T+++ + KSG+ +A+ + +M
Sbjct: 585 LKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSI 644
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
PDS + LI L R + A+ + V P+ + + G +
Sbjct: 645 LPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGI 704
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
+ E+M+ L H P++ T + ++ + GK ++ + LL +M N++ ++TTY +++
Sbjct: 705 YFREQMDNLGH-TPDIVTTNAMIDGYSRMGKIEKT-NDLLPEMGNQNG-GPNLTTYNILL 761
Query: 459 HGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
HG + ++LL++ +I + I P TC ++ + + +M + KI
Sbjct: 762 HGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKI 811
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 106/471 (22%), Positives = 195/471 (41%), Gaps = 47/471 (9%)
Query: 83 VFQSLKQDHVCNAIQPSHYLVNKL--IHRFKDDWKSALGIFRWAGSCPGYEHSSEIYE-- 138
+ + +D + I L+N + RFK + I+R S G +S+ IY
Sbjct: 425 LLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCC 484
Query: 139 MMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
M + +R + M +LE ++ H T N + + + + E+ +R + + G
Sbjct: 485 RMGCLKEAIRIYEAM--ILEGHTRDHF-TFNVLVTSLCKAGKVAEAEEFMRC---MTSDG 538
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQ 257
+ NT + + L++ G+ A SVF E+ K P T+ + G CK + EA+
Sbjct: 539 ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 598
Query: 258 WTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
++ + + Y+T++ + C+ N +K L EM + P+ TYT+++S L
Sbjct: 599 KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 658
Query: 318 AKSGDFEEAIRITEKMKIVGSK-PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
+ G AI ++ + G+ P+ + C + + +A + + +Y ++ +M G P
Sbjct: 659 CRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIY-FREQMDNLGHTP 717
Query: 377 DTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC--- 433
D T N MI +S G EK +L EM ++ PN+ T++ LL K
Sbjct: 718 DIVTTNAMIDGYSRMGKIEKTNDLLPEMGN-QNGGPNLTTYNILLHGYSKRKDVSTSFLL 776
Query: 434 -----LSQLLDDMVNKHHLSLDIT-------------------------TYTLVIHGLCR 463
L+ +L D + H L L I T+ ++I C
Sbjct: 777 YRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCA 836
Query: 464 ANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
+ WA+ L K M I+ TC ++ + + H + + + M K
Sbjct: 837 NGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSK 887
Score = 93.2 bits (230), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 149/364 (40%), Gaps = 39/364 (10%)
Query: 181 AGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHT 239
AGQW+ + +++ G + T N ++D + GK+E + E+ + PN T
Sbjct: 697 AGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTT 756
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+NI +HG+ K V + + + +G P ++ +++ C ++L
Sbjct: 757 YNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFI 816
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
+G + T+ ++S +G+ A + + M +G D + ++ L R R Q
Sbjct: 817 CRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQ 876
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQ---- 415
E+ V EM + G++P++ + +I G + AF V EEM + C PNV
Sbjct: 877 ESRMVLH-EMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAM 935
Query: 416 ------------------------------TFHPLLKSCFKTGKTDECLSQLLDDMVNKH 445
+F L+ C K G E L L +++
Sbjct: 936 VRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALE--LRVVMSNC 993
Query: 446 HLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCR-LILDEVKQKHMYDA 504
L LD+ +Y ++I GLC A+ L++EM G T + LI + ++ +
Sbjct: 994 GLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSG 1053
Query: 505 AEKI 508
A+ I
Sbjct: 1054 ADII 1057
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/386 (21%), Positives = 164/386 (42%), Gaps = 42/386 (10%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
++ +++ G + + ++ +EM+K GH T T +++ G +A + L
Sbjct: 546 FDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH 605
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINR-- 252
+T N LL +CK G + A S+F E+ + I P+++T+ I G C+ +
Sbjct: 606 AVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTV 665
Query: 253 -------------------------VD----EAQWTI-----QEMKGHGCHPCVISYSTI 278
VD QW ++M G P +++ + +
Sbjct: 666 IAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAM 725
Query: 279 IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
I Y R K +LL EM Q PN+ TY ++ +K D + + + + G
Sbjct: 726 IDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGI 785
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
PD + L+ + ++ ++ + + + + GV D TFN +I+ +G AF
Sbjct: 786 LPDKLTCHSLVLGICESNMLEIGLKILKAFICR-GVEVDRYTFNMLISKCCANGEINWAF 844
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
+++ M L + T ++ + + E S+++ ++K +S + Y +I
Sbjct: 845 DLVKVMTSL-GISLDKDTCDAMVSVLNRNHRFQE--SRMVLHEMSKQGISPESRKYIGLI 901
Query: 459 HGLCRANKCEWAYLLFKEMIGHDITP 484
+GLCR + A+++ +EMI H I P
Sbjct: 902 NGLCRVGDIKTAFVVKEEMIAHKICP 927
Score = 79.7 bits (195), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 124/279 (44%), Gaps = 4/279 (1%)
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
N ++I I + + + ++ + M +G +P V + + I+ S + V+ L
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 181
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
EM + P+V T+ +++ L G FE++ + +KM+ G P +N +++ +
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 241
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQ 415
R + A+ + M GV D T+N +I K + +L +M K PN
Sbjct: 242 GRFKAAIELLD-HMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRK-RMIHPNEV 299
Query: 416 TFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFK 475
T++ L+ GK SQLL++M++ LS + T+ +I G + A +F
Sbjct: 300 TYNTLINGFSNEGKV-LIASQLLNEMLS-FGLSPNHVTFNALIDGHISEGNFKEALKMFY 357
Query: 476 EMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
M +TP + ++LD + + +D A MK+
Sbjct: 358 MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKR 396
Score = 40.4 bits (93), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 52/265 (19%), Positives = 98/265 (36%), Gaps = 49/265 (18%)
Query: 82 EVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWA------GSCPGYEHSSE 135
E+ + + +C ++ Y N LI + A G WA + G +
Sbjct: 806 EIGLKILKAFICRGVEVDRYTFNMLISKC-----CANGEINWAFDLVKVMTSLGISLDKD 860
Query: 136 IYEMMVDILGKVRQMDQMRALLEEMSK--------GHIVTLNTIAKV------------- 174
+ MV +L + + + R +L EMSK +I +N + +V
Sbjct: 861 TCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEM 920
Query: 175 ---------------MRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKV 219
+R + G+ ++A + L + L+ CK G V
Sbjct: 921 IAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNV 980
Query: 220 ELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTI 278
A + + + +C + + ++N+ I G C + A +EMKG G +Y +
Sbjct: 981 IEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKAL 1040
Query: 279 IQS-YCRQYNFSKVYELLDEMQAQG 302
I+ R+ FS +L ++ A+G
Sbjct: 1041 IRGLLARETAFSGADIILKDLLARG 1065
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 145 bits (366), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 195/418 (46%), Gaps = 47/418 (11%)
Query: 129 GYEHSSEIYEMMVDIL---GKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWE 185
GYE ++ + +++ L G+V + ++ + EM GH L TI ++ +G+
Sbjct: 153 GYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM--GHKPDLITINTLVNGLCLSGKEA 210
Query: 186 DAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF------------------- 226
+A+ D++ +G + N T +L+ +CK G+ LA +
Sbjct: 211 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 227 ------------------LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGC 268
+E+K I N T+NI I G+C R D+ +++M
Sbjct: 271 DGLCKHGSLDNAFNLFNEMEMKG-ITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKI 329
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
+P V+++S +I S+ ++ + EL EM +G P+ +TYT+++ K ++A +
Sbjct: 330 NPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQ 389
Query: 329 ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF 388
+ + M G P+ R FN LI +A+R+ + + +++ +M GV DT T+NT+I F
Sbjct: 390 MVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR-KMSLRGVVADTVTYNTLIQGF 448
Query: 389 SHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
G A + +EM PN+ T+ LL G++++ L + + K +
Sbjct: 449 CELGKLNVAKELFQEMVS-RKVPPNIVTYKILLDGLCDNGESEKALEIF--EKIEKSKME 505
Query: 449 LDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAE 506
LDI Y ++IHG+C A+K + A+ LF + + P +T +++ + +K AE
Sbjct: 506 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAE 563
Score = 135 bits (340), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 167/363 (46%), Gaps = 43/363 (11%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +++D L K +D L EM KG + T ++ F AG+W+D + ++
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-------------------------- 229
+ N T ++L+D+ KEGK+ A + E+
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385
Query: 230 -----------KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTI 278
K C PN TFNI I+G+CK NR+D+ ++M G ++Y+T+
Sbjct: 386 KANQMVDLMVSKGC-DPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTL 444
Query: 279 IQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
IQ +C + EL EM ++ PPN+VTY ++ L +G+ E+A+ I EK++
Sbjct: 445 IQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKM 504
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
+ D +N +I+ + AS+V +A ++ +P GV P T+N MI G +A
Sbjct: 505 ELDIGIYNIIIHGMCNASKVDDAWDLF-CSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAE 563
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVI 458
+ +M + H P+ T++ L+++ G D S L + + + S+D +T +VI
Sbjct: 564 LLFRKMEEDGHA-PDGWTYNILIRA--HLGDGDATKSVKLIEELKRCGFSVDASTIKMVI 620
Query: 459 HGL 461
L
Sbjct: 621 DML 623
Score = 133 bits (335), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 187/418 (44%), Gaps = 53/418 (12%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
+ + + K +Q D + AL ++M KG L T++ ++ F + A ++
Sbjct: 91 FSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKII 150
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCI-----PPNAHTFNIFIHGWCKI 250
G E NT T + L++ LC EG+V A LEL + P+ T N ++G C
Sbjct: 151 KLGYEPNTITFSTLINGLCLEGRVSEA----LELVDRMVEMGHKPDLITINTLVNGLCLS 206
Query: 251 NRVDEAQWTIQEMKGHGCHPCVIS-----------------------------------Y 275
+ EA I +M +GC P ++ Y
Sbjct: 207 GKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY 266
Query: 276 STIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKI 335
S II C+ + + L +EM+ +G N++TY ++ +G +++ ++ M
Sbjct: 267 SIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIK 326
Query: 336 VGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHE 395
P+ F+ LI + + +++EA +++ EM G+APDT T+ ++I F H +
Sbjct: 327 RKINPNVVTFSVLIDSFVKEGKLREAEELHK-EMIHRGIAPDTITYTSLIDGFCKENHLD 385
Query: 396 KAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYT 455
KA +++ M + C PN++TF+ L+ K + D+ L +L M + ++ D TY
Sbjct: 386 KANQMVDLMVS-KGCDPNIRTFNILINGYCKANRIDDGL-ELFRKMSLRGVVA-DTVTYN 442
Query: 456 LVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV----KQKHMYDAAEKIE 509
+I G C K A LF+EM+ + P T +++LD + + + + EKIE
Sbjct: 443 TLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIE 500
Score = 122 bits (306), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 160/335 (47%), Gaps = 8/335 (2%)
Query: 164 HIVTLNTIAKVMRRFSGAG---QWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVE 220
H L T+ R FS Q++ + ++ G+ N T++++++ C+ K+
Sbjct: 81 HSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLC 140
Query: 221 LARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTII 279
LA S ++ K PN TF+ I+G C RV EA + M G P +I+ +T++
Sbjct: 141 LAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLV 200
Query: 280 QSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSK 339
C ++ L+D+M GC PN VTY V++ + KSG A+ + KM+ K
Sbjct: 201 NGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIK 260
Query: 340 PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFH 399
D+ ++ +I L + + A ++ EM G+ + T+N +I F + G +
Sbjct: 261 LDAVKYSIIIDGLCKHGSLDNAFNLFN-EMEMKGITTNIITYNILIGGFCNAGRWDDGAK 319
Query: 400 VLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIH 459
+L +M K PNV TF L+ S K GK E +L +M+++ ++ D TYT +I
Sbjct: 320 LLRDMIK-RKINPNVVTFSVLIDSFVKEGKLREA-EELHKEMIHR-GIAPDTITYTSLID 376
Query: 460 GLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
G C+ N + A + M+ P +T ++++
Sbjct: 377 GFCKENHLDKANQMVDLMVSKGCDPNIRTFNILIN 411
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 117/272 (43%), Gaps = 41/272 (15%)
Query: 273 ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEK 332
+SY ++S +L +M P V+ ++ + S +AK+ ++ + + ++
Sbjct: 54 LSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQ 113
Query: 333 MKI-----------------------------------VGSKPDSRFFNCLIYTLGRASR 357
M++ +G +P++ F+ LI L R
Sbjct: 114 MELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGR 173
Query: 358 VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH-CKPNVQT 416
V EA+ + M E G PD T NT++ G +A ++++M +E+ C+PN T
Sbjct: 174 VSEALELVD-RMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKM--VEYGCQPNAVT 230
Query: 417 FHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKE 476
+ P+L K+G+T L+ L + + ++ LD Y+++I GLC+ + A+ LF E
Sbjct: 231 YGPVLNVMCKSGQT--ALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNE 288
Query: 477 MIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
M IT T +++ +D K+
Sbjct: 289 MEMKGITTNIITYNILIGGFCNAGRWDDGAKL 320
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 107/232 (46%), Gaps = 7/232 (3%)
Query: 92 VCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQ 149
V P+ N LI+ + + L +FR S G + Y ++ ++ +
Sbjct: 395 VSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM-SLRGVVADTVTYNTLIQGFCELGK 453
Query: 150 MDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNL 208
++ + L +EM S+ + T ++ G+ E A+ F+++ +E + N+
Sbjct: 454 LNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNI 513
Query: 209 LLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
++ +C KV+ A +F L LK + P T+NI I G CK + EA+ ++M+
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLPLKG-VKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEED 572
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLA 318
G P +Y+ +I+++ + +K +L++E++ G + T V+ L+
Sbjct: 573 GHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLS 624
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 194/398 (48%), Gaps = 24/398 (6%)
Query: 104 NKLIHRFKDDWKSALGIFRWAGSCPGYEHSS-----------EIYEMMVDILGKVRQMDQ 152
N+ +HR S LG + + P + H S + ++ ++ L ++ +D
Sbjct: 12 NRFVHR------SLLGKGKCGTAPPSFSHCSFWVRDFSGVRYDYRKISINRLNDLK-LDD 64
Query: 153 MRALLEEMSKGH-IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLD 211
L +M K ++ +K++ + +++ + +++ G+ N T ++L++
Sbjct: 65 AVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILIN 124
Query: 212 TLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHP 270
C+ ++ LA +V ++ K P+ T N ++G+C NR+ +A + +M G P
Sbjct: 125 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQP 184
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRIT 330
+++T+I R S+ L+D M +GC P++VTY V++ L K GD + A+ +
Sbjct: 185 DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLL 244
Query: 331 EKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSH 390
+KM+ +P +N +I L V +A+ ++ EM G+ P+ T+N++I +
Sbjct: 245 KKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLF-TEMDNKGIRPNVVTYNSLIRCLCN 303
Query: 391 HGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLD 450
+G A +L +M + PNV TF L+ + K GK E +L D+M+ K + D
Sbjct: 304 YGRWSDASRLLSDMIE-RKINPNVVTFSALIDAFVKEGKLVEA-EKLYDEMI-KRSIDPD 360
Query: 451 ITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
I TY+ +I+G C ++ + A +F+ MI D P T
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 398
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 177/364 (48%), Gaps = 21/364 (5%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEM-SKG---HIVTLNTIAKVMRRFSGAGQWEDAVRTF 191
IY ++D L + ++ L EM +KG ++VT N++ + + + G+W DA R
Sbjct: 258 IYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY---GRWSDASRLL 314
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKI 250
++ + N T + L+D KEGK+ A ++ E+ K I P+ T++ I+G+C
Sbjct: 315 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 374
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
+R+DEA+ + M C P V++Y+T+I+ +C+ + EL EM +G N VTY
Sbjct: 375 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTY 434
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
TT++ ++ + + A + ++M G PD ++ L+ L +V+ A+ V++ +
Sbjct: 435 TTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEY-LQ 493
Query: 371 ENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKT 430
+ + PD T+N MI G E + + ++ L+ KPNV T+ ++ + G
Sbjct: 494 RSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS-LKGVKPNVVTYTTMMSGFCRKGLK 552
Query: 431 DECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCR 490
+E L +M + L D TY +I R + L +EM ++CR
Sbjct: 553 EEA-DALFREMKEEGPLP-DSGTYNTLIRAHLRDGDKAASAELIREM---------RSCR 601
Query: 491 LILD 494
+ D
Sbjct: 602 FVGD 605
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 179/388 (46%), Gaps = 6/388 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDA 187
GY+ S + ++ L + + + AL++ M KG L T V+ G + A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHG 246
+ ++ +E N ++D LC V A ++F E+ + I PN T+N I
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C R +A + +M +P V+++S +I ++ ++ + +L DEM + P+
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
+ TY+++++ +EA + E M P+ +N LI +A RV E + +++
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
EM + G+ +T T+ T+I F + A V ++M + P++ T+ LL
Sbjct: 421 -EMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVS-DGVLPDIMTYSILLDGLCN 478
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
GK + L ++ + + + + DI TY ++I G+C+A K E + LF + + P
Sbjct: 479 NGKVETAL--VVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 536
Query: 487 QTCRLILDEVKQKHMYDAAEKIEAVMKK 514
T ++ +K + + A+ + MK+
Sbjct: 537 VTYTTMMSGFCRKGLKEEADALFREMKE 564
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 180/383 (46%), Gaps = 41/383 (10%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
GYE + I+ +++ L ++ + L++ M + GH TL T+ ++ G+ DA
Sbjct: 153 GYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDA 212
Query: 188 VRTFDELGTFGLEKNTET-----------------MNLL------------------LDT 212
V D + G + N T M LL +D
Sbjct: 213 VVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 272
Query: 213 LCKEGKVELARSVFLELK-SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPC 271
LCK+G ++ A ++F E++ + T+N I G+C R D+ +++M P
Sbjct: 273 LCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPN 332
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITE 331
V+++S +I S+ ++ + +LL EM +G PN +TY +++ K EEAI++ +
Sbjct: 333 VVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVD 392
Query: 332 KMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHH 391
M G PD FN LI +A+R+ + + +++ EM GV +T T+NT++ F
Sbjct: 393 LMISKGCDPDIMTFNILINGYCKANRIDDGLELFR-EMSLRGVIANTVTYNTLVQGFCQS 451
Query: 392 GHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDI 451
G E A + +EM +P++ ++ LL G+ ++ L + K + LDI
Sbjct: 452 GKLEVAKKLFQEMVS-RRVRPDIVSYKILLDGLCDNGELEKALEIF--GKIEKSKMELDI 508
Query: 452 TTYTLVIHGLCRANKCEWAYLLF 474
Y ++IHG+C A+K + A+ LF
Sbjct: 509 GIYMIIIHGMCNASKVDDAWDLF 531
Score = 122 bits (306), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 161/335 (48%), Gaps = 6/335 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDA 187
G++ Y ++ + D LL +M K I + T + ++ F G+ +A
Sbjct: 293 GFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREA 352
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELA-RSVFLELKSCIPPNAHTFNIFIHG 246
+ E+ G+ NT T N L+D CKE ++E A + V L + P+ TFNI I+G
Sbjct: 353 DQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILING 412
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
+CK NR+D+ +EM G ++Y+T++Q +C+ +L EM ++ P+
Sbjct: 413 YCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPD 472
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
+V+Y ++ L +G+ E+A+ I K++ + D + +I+ + AS+V +A ++
Sbjct: 473 IVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLF- 531
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
+P GV D +N MI+ KA + +M + H P+ T++ L+++
Sbjct: 532 CSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHA-PDELTYNILIRA--H 588
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGL 461
G D + L + + D++T +VI+ L
Sbjct: 589 LGDDDATTAAELIEEMKSSGFPADVSTVKMVINML 623
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 133/299 (44%), Gaps = 6/299 (2%)
Query: 218 KVELARSVFLELKSCIP-PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYS 276
K + A +F ++ P P FN K + + ++M+ G + + S
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 277 TIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIV 336
+I +CR S + + ++ G P+ V + T+++ L EA+ + ++M +
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 337 GSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEK 396
G KP N L+ L +V +AV + M E G P+ T+ ++ + G
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLID-RMVETGFQPNEVTYGPVLNVMCKSGQTAL 246
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTL 456
A +L +M + + K + + ++ K G D + L ++M K + DI TY
Sbjct: 247 AMELLRKMEE-RNIKLDAVKYSIIIDGLCKDGSLDNAFN-LFNEMEIKGFKA-DIITYNT 303
Query: 457 VIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE-VKQKHMYDAAEKIEAVMKK 514
+I G C A + + L ++MI I+P T +++D VK+ + +A + ++ +M++
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQR 362
Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 148/337 (43%), Gaps = 49/337 (14%)
Query: 35 IVSSSPIESYCS-----DGARLDHHQVLCVDSPRLPDIDVIISKVHVGSSEDEVFQSLKQ 89
I ++ I +C+ DGA+L + SP + V+I E Q LK+
Sbjct: 299 ITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKE 358
Query: 90 DHVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKV 147
+ I P+ N LI F ++ + A+ + S G + + ++++ K
Sbjct: 359 -MMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMIS-KGCDPDIMTFNILINGYCKA 416
Query: 148 RQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETM 206
++D L EMS +G I T +++ F +G+ E A + F E+ + + + +
Sbjct: 417 NRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSY 476
Query: 207 NLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTI----- 260
+LLD LC G++E A +F ++ KS + + + I IHG C ++VD+A W +
Sbjct: 477 KILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDA-WDLFCSLP 535
Query: 261 -------------------------------QEMKGHGCHPCVISYSTIIQSYCRQYNFS 289
++M G P ++Y+ +I+++ + +
Sbjct: 536 LKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDAT 595
Query: 290 KVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
EL++EM++ G P +V T V++ L+ SG+ +++
Sbjct: 596 TAAELIEEMKSSGFPADVSTVKMVINMLS-SGELDKS 631
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 182/369 (49%), Gaps = 8/369 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
G H+ Y ++++ + Q+ ALL +M K G+ ++ T++ ++ + + DA
Sbjct: 115 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIH 245
V D++ G +T T L+ L K A ++ + + C PN T+ + ++
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGC-QPNLVTYGVVVN 233
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G CK +D A + +M+ V+ YST+I S C+ + L EM+ +G P
Sbjct: 234 GLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRP 293
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
NV+TY++++S L + +A R+ M P+ FN LI + ++ EA +Y
Sbjct: 294 NVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLY 353
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
EM + + PD T++++I F H ++A H+ E M + C PNV T++ L+
Sbjct: 354 D-EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS-KDCFPNVVTYNTLINGFC 411
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
K + DE + +L +M ++ L + TYT +IHG +A C+ A ++FK+M+ + P
Sbjct: 412 KAKRIDEGV-ELFREM-SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPN 469
Query: 486 YQTCRLILD 494
T +LD
Sbjct: 470 IMTYNTLLD 478
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 151/304 (49%), Gaps = 4/304 (1%)
Query: 131 EHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVR 189
E + IY ++D L K R D L EM +KG + T + ++ +W DA R
Sbjct: 257 EANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASR 316
Query: 190 TFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWC 248
++ + N T N L+D KEGK+ A ++ E+ K I P+ T++ I+G+C
Sbjct: 317 LLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 376
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
+R+DEA+ + M C P V++Y+T+I +C+ + EL EM +G N V
Sbjct: 377 MHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTV 436
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
TYTT++ ++ D + A + ++M G P+ +N L+ L + ++++A+ V++
Sbjct: 437 TYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEY- 495
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
+ + + P T+N MI G E + + ++ L+ KP+V ++ ++ + G
Sbjct: 496 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLS-LKGVKPDVIIYNTMISGFCRKG 554
Query: 429 KTDE 432
+E
Sbjct: 555 LKEE 558
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 138/289 (47%), Gaps = 9/289 (3%)
Query: 229 LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
+KS P+ FN + K+ + D ++M+ G + +Y+ +I +CR+
Sbjct: 77 VKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQI 136
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
S LL +M G P++VT +++++ +A+ + ++M +G +PD+ F L
Sbjct: 137 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 196
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
I+ L ++ EAV + M + G P+ T+ ++ G + AF++L NK+E
Sbjct: 197 IHGLFLHNKASEAVALVD-RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLL---NKME 252
Query: 409 HCK--PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANK 466
K NV + ++ S K D+ L+ L +M NK + ++ TY+ +I LC +
Sbjct: 253 AAKIEANVVIYSTVIDSLCKYRHEDDALN-LFTEMENK-GVRPNVITYSSLISCLCNYER 310
Query: 467 CEWAYLLFKEMIGHDITPRYQTCRLILDE-VKQKHMYDAAEKIEAVMKK 514
A L +MI I P T ++D VK+ + +A + + ++K+
Sbjct: 311 WSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR 359
>sp|Q9FX35|PP117_ARATH Pentatricopeptide repeat-containing protein At1g73400,
mitochondrial OS=Arabidopsis thaliana GN=At1g73400 PE=2
SV=2
Length = 568
Score = 143 bits (360), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/425 (24%), Positives = 197/425 (46%), Gaps = 17/425 (4%)
Query: 102 LVNKLIHRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILG----KVRQMDQMRALL 157
+V K++ R + + K+A F WAG Y H Y M+DIL K +Q + +L
Sbjct: 127 VVCKILQRLQYEEKTAFRFFTWAGHQEHYSHEPIAYNEMIDILSSTKYKNKQFRIVIDML 186
Query: 158 EEMSKGH--IVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTE--TMNLLLDTL 213
+ M + + +V ++ + +++R++ ++ V+ F + ++ E N+LLD L
Sbjct: 187 DYMKRNNKTVVLVDVLLEILRKY--CERYLTHVQKFAKRKRIRVKTQPEINAFNMLLDAL 244
Query: 214 CKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI 273
CK G V+ ++ ++ + P+A+TFN+ GWC++ +A ++EM G P
Sbjct: 245 CKCGLVKEGEALLRRMRHRVKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENF 304
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQG---CPPNVVTYTTVMSYLAKSGDFEEAIRIT 330
+Y I ++C+ + +L D M +G P T+ ++ LAK+ EE +
Sbjct: 305 TYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELI 364
Query: 331 EKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSH 390
+M G PD + +I + A +V EA Y + EM G PD T+N + +
Sbjct: 365 GRMISTGCLPDVSTYKDVIEGMCMAEKVDEA-YKFLDEMSNKGYPPDIVTYNCFLRVLCE 423
Query: 391 HGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLD 450
+ ++A + M + C P+VQT++ L+ F+ D + + ++K D
Sbjct: 424 NRKTDEALKLYGRMVE-SRCAPSVQTYNMLISMFFEMDDPDGAFNTWTE--MDKRDCVQD 480
Query: 451 ITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEA 510
+ TY +I+GL ++ + A L +E++ + Y+ L + + A K+
Sbjct: 481 VETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVGNLKAIHKVSE 540
Query: 511 VMKKL 515
MKK
Sbjct: 541 HMKKF 545
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/289 (20%), Positives = 114/289 (39%), Gaps = 24/289 (8%)
Query: 93 CNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSC-----------------PGYEHSSE 135
C ++ L+ ++ HR K D + +F G C G++ +
Sbjct: 247 CGLVKEGEALLRRMRHRVKPDANTFNVLF--FGWCRVRDPKKAMKLLEEMIEAGHKPENF 304
Query: 136 IYEMMVDILGKVRQMDQMRALLEEM-SKGHIV---TLNTIAKVMRRFSGAGQWEDAVRTF 191
Y +D + +D+ L + M +KG V T T A ++ + + E+
Sbjct: 305 TYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELI 364
Query: 192 DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKI 250
+ + G + T +++ +C KV+ A E+ + PP+ T+N F+ C+
Sbjct: 365 GRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCEN 424
Query: 251 NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
+ DEA M C P V +Y+ +I + + + EM + C +V TY
Sbjct: 425 RKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETY 484
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
+++ L +EA + E++ G K R F+ + L ++
Sbjct: 485 CAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVGNLK 533
>sp|Q9FZ19|PPR5_ARATH Putative pentatricopeptide repeat-containing protein At1g02420
OS=Arabidopsis thaliana GN=At1g02420 PE=3 SV=2
Length = 491
Score = 143 bits (360), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 108/364 (29%), Positives = 186/364 (51%), Gaps = 12/364 (3%)
Query: 87 LKQDHVCNAIQPSHYLVNKLIHRFK---DDWKSALGIFRWAGSCPGYEHSSEIYEMMVDI 143
LK+ + I S L+++++ R + + L +R+A + G+ HSS + M+ I
Sbjct: 58 LKESLSSSGIHLSKDLIDRVLKRVRFSHGNPIQTLEFYRYASAIRGFYHSSFSLDTMLYI 117
Query: 144 LGKVRQMDQMRALLEEMSKG--HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEK 201
LG+ R+ DQ+ LL E + +++ T+ V+ R + V +F + +
Sbjct: 118 LGRNRKFDQIWELLIETKRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFKRLVPDF 177
Query: 202 -NTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTI 260
+T N LL TLC+E + AR+V+ LK P+ TFNI + GW +EA+
Sbjct: 178 FDTACFNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGW---KSSEEAEAFF 234
Query: 261 QEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKS 320
+EMKG G P V++Y+++I YC+ K Y+L+D+M+ + P+V+TYTTV+ L
Sbjct: 235 EEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLI 294
Query: 321 GDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTST 380
G ++A + ++MK G PD +N I A R+ +A + EM + G++P+ +T
Sbjct: 295 GQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVD-EMVKKGLSPNATT 353
Query: 381 FNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDD 440
+N + S +++ + M E C PN Q+ L+K + K D + +L +D
Sbjct: 354 YNLFFRVLSLANDLGRSWELYVRMLGNE-CLPNTQSCMFLIKMFKRHEKVDMAM-RLWED 411
Query: 441 MVNK 444
MV K
Sbjct: 412 MVVK 415
Score = 68.9 bits (167), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 88/179 (49%), Gaps = 10/179 (5%)
Query: 333 MKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
MK G KPD +N LI + +++A Y +M E PD T+ T+I G
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDREIEKA-YKLIDKMREEEETPDVITYTTVIGGLGLIG 295
Query: 393 HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS-CF--KTGKTDECLSQLLDDMVNKHHLSL 449
+KA VL+EM + C P+V ++ +++ C + G D +L+D+MV K LS
Sbjct: 296 QPDKAREVLKEMKEY-GCYPDVAAYNAAIRNFCIARRLGDAD----KLVDEMVKKG-LSP 349
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+ TTY L L AN ++ L+ M+G++ P Q+C ++ K+ D A ++
Sbjct: 350 NATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRL 408
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 98/245 (40%), Gaps = 14/245 (5%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGH----IVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
Y ++D+ K R++++ L+++M + ++T T V+ GQ + A
Sbjct: 249 YNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTT---VIGGLGLIGQPDKAREVLK 305
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKIN 251
E+ +G + N + C ++ A + E+ K + PNA T+N+F N
Sbjct: 306 EMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLAN 365
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
+ + M G+ C P S +I+ + R L ++M +G +
Sbjct: 366 DLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYSLVSD 425
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEA------VYVY 365
++ L EEA + +M G +P + F + + A++ E + ++
Sbjct: 426 VLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRIKLLMELANKHDEVNNLIQKMAIF 485
Query: 366 QVEMP 370
E+P
Sbjct: 486 STEIP 490
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 143 bits (360), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 176/406 (43%), Gaps = 47/406 (11%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNTIAKVMRRFSGAGQW 184
G+ S + Y ++ LGK R +D + LL+EM K ++ T +V+ R AG+
Sbjct: 218 GFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGR---AGKI 274
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCI----------- 233
+A + G + T +L+D LC K++ A+ VF ++K+
Sbjct: 275 NEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITL 334
Query: 234 -------------------------PPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGC 268
P+ TF I + CK EA T+ M+ G
Sbjct: 335 LDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGI 394
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
P + +Y+T+I R + EL M++ G P TY + Y KSGD A+
Sbjct: 395 LPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALE 454
Query: 329 ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF 388
EKMK G P+ N +Y+L +A R +EA ++ + + G+ PD+ T+N M+ +
Sbjct: 455 TFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFY-GLKDIGLVPDSVTYNMMMKCY 513
Query: 389 SHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
S G ++A +L EM + C+P+V + L+ + +K + DE + + + L
Sbjct: 514 SKVGEIDEAIKLLSEMME-NGCEPDVIVVNSLINTLYKADRVDEAWKMFM--RMKEMKLK 570
Query: 449 LDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
+ TY ++ GL + K + A LF+ M+ P T + D
Sbjct: 571 PTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFD 616
Score = 119 bits (298), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 150/299 (50%), Gaps = 8/299 (2%)
Query: 214 CKEGKVELARSVFLELKS--CIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPC 271
CK V AR++F + + P T+N+ I G + + ++ AQ ++K GC P
Sbjct: 760 CKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPD 819
Query: 272 VISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRI-T 330
V +Y+ ++ +Y + +++EL EM C N +T+ V+S L K+G+ ++A+ +
Sbjct: 820 VATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYY 879
Query: 331 EKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSH 390
+ M P + + LI L ++ R+ EA +++ M + G P+ + +N +I F
Sbjct: 880 DLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFE-GMLDYGCRPNCAIYNILINGFGK 938
Query: 391 HGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLD 450
G + A + + M K E +P+++T+ L+ G+ DE L + + + L+ D
Sbjct: 939 AGEADAACALFKRMVK-EGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKE--LKESGLNPD 995
Query: 451 ITTYTLVIHGLCRANKCEWAYLLFKEM-IGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+ Y L+I+GL ++++ E A +LF EM ITP T ++ + M + A KI
Sbjct: 996 VVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKI 1054
Score = 115 bits (288), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 140/293 (47%), Gaps = 7/293 (2%)
Query: 143 ILGKVRQMDQMR----ALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFG 198
++G + + D + L+ S G I + T ++ + +G+ ++ + E+ T
Sbjct: 791 LIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHE 850
Query: 199 LEKNTETMNLLLDTLCKEGKVELARSVFLELKSC--IPPNAHTFNIFIHGWCKINRVDEA 256
E NT T N+++ L K G V+ A ++ +L S P A T+ I G K R+ EA
Sbjct: 851 CEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEA 910
Query: 257 QWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSY 316
+ + M +GC P Y+ +I + + L M +G P++ TY+ ++
Sbjct: 911 KQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDC 970
Query: 317 LAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAP 376
L G +E + +++K G PD +N +I LG++ R++EA+ ++ G+ P
Sbjct: 971 LCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITP 1030
Query: 377 DTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
D T+N++I G E+A + E+ + +PNV TF+ L++ +GK
Sbjct: 1031 DLYTYNSLILNLGIAGMVEEAGKIYNEIQR-AGLEPNVFTFNALIRGYSLSGK 1082
Score = 113 bits (283), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 140/295 (47%), Gaps = 7/295 (2%)
Query: 197 FGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS--CIPPNAHTFNIFIHGWCKINRVD 254
G++ T NLL+ L + +E+A+ VFL++KS CI P+ T+N + + K ++D
Sbjct: 779 LGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCI-PDVATYNFLLDAYGKSGKID 837
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYEL-LDEMQAQGCPPNVVTYTTV 313
E +EM H C I+++ +I + N +L D M + P TY +
Sbjct: 838 ELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPL 897
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
+ L+KSG EA ++ E M G +P+ +N LI G+A A +++ M + G
Sbjct: 898 IDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFK-RMVKEG 956
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
V PD T++ ++ G ++ H +E+ K P+V ++ ++ K+ + +E
Sbjct: 957 VRPDLKTYSVLVDCLCMVGRVDEGLHYFKEL-KESGLNPDVVCYNLIINGLGKSHRLEEA 1015
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
L L ++M ++ D+ TY +I L A E A ++ E+ + P T
Sbjct: 1016 LV-LFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFT 1069
Score = 105 bits (262), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 150/340 (44%), Gaps = 9/340 (2%)
Query: 154 RALLEEMSK--GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLD 211
R L E+ +K G L T ++ A E A F ++ + G + T N LLD
Sbjct: 769 RTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLD 828
Query: 212 TLCKEGKVELARSVFLELKS--CIPPNAHTFNIFIHGWCKINRVDEA-QWTIQEMKGHGC 268
K GK++ ++ E+ + C N T NI I G K VD+A M
Sbjct: 829 AYGKSGKIDELFELYKEMSTHEC-EANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDF 887
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
P +Y +I + + +L + M GC PN Y +++ K+G+ + A
Sbjct: 888 SPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACA 947
Query: 329 ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF 388
+ ++M G +PD + ++ L+ L RV E ++ ++ E+ E+G+ PD +N +I
Sbjct: 948 LFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFK-ELKESGLNPDVVCYNLIINGL 1006
Query: 389 SHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
E+A + EM P++ T++ L+ + G +E + + + + + L
Sbjct: 1007 GKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEE--AGKIYNEIQRAGLE 1064
Query: 449 LDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
++ T+ +I G + K E AY +++ M+ +P T
Sbjct: 1065 PNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGT 1104
Score = 103 bits (256), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 105/431 (24%), Positives = 196/431 (45%), Gaps = 33/431 (7%)
Query: 95 AIQPSHYLVNKLI------HRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVR 148
I P+ + N LI HR D AL +F S G + ++ Y + +D GK
Sbjct: 393 GILPNLHTYNTLICGLLRVHRLDD----ALELFGNMESL-GVKPTAYTYIVFIDYYGK-- 445
Query: 149 QMDQMRAL--LEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTET 205
D + AL E+M +KG + + + AG+ +A + F L GL ++ T
Sbjct: 446 SGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVT 505
Query: 206 MNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
N+++ K G+++ A + E+ ++ P+ N I+ K +RVDEA MK
Sbjct: 506 YNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMK 565
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
P V++Y+T++ + + EL + M +GCPPN +T+ T+ L K+ +
Sbjct: 566 EMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVT 625
Query: 325 EAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV-YVYQVEMPENGVAPDTSTFNT 383
A+++ KM +G PD +N +I+ L + +V+EA+ + +Q++ V PD T T
Sbjct: 626 LALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL---VYPDFVTLCT 682
Query: 384 MITMFSHHGHHEKAFHVLEEMNKLEHC--KPNVQTFHPLLKSCFKTGKTDECLS---QLL 438
++ E A+ ++ N L +C +P + L+ S D +S +L+
Sbjct: 683 LLPGVVKASLIEDAYKIIT--NFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLV 740
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH-DITPRYQTCRLILDEVK 497
+ + + S+ + +I C+ N A LF++ + P+ T L++ +
Sbjct: 741 ANGICRDGDSILVP----IIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLL 796
Query: 498 QKHMYDAAEKI 508
+ M + A+ +
Sbjct: 797 EADMIEIAQDV 807
Score = 103 bits (256), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 145/322 (45%), Gaps = 5/322 (1%)
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVF-LELKSCIPPNAHTFNIFIHGWCKINRV 253
G L TET N +L+ L +GK+E VF L K I + +T+ +
Sbjct: 110 GNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGL 169
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
+A + +++M+ G SY+ +I + ++ E+ M +G P++ TY+++
Sbjct: 170 KQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSL 229
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
M L K D + + + ++M+ +G KP+ F I LGRA ++ EA + + M + G
Sbjct: 230 MVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILK-RMDDEG 288
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
PD T+ +I + A V E+M H KP+ T+ LL F + +
Sbjct: 289 CGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRH-KPDRVTYITLLDR-FSDNRDLDS 346
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
+ Q +M H+ D+ T+T+++ LC+A A+ M I P T ++
Sbjct: 347 VKQFWSEMEKDGHVP-DVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLI 405
Query: 494 DEVKQKHMYDAAEKIEAVMKKL 515
+ + H D A ++ M+ L
Sbjct: 406 CGLLRVHRLDDALELFGNMESL 427
Score = 102 bits (254), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 142/314 (45%), Gaps = 5/314 (1%)
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTF 240
G+ E+ FD + ++++T T + +L +G ++ A +++ NA+++
Sbjct: 132 GKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSY 191
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
N IH K EA + M G P + +YS+++ ++ + V LL EM+
Sbjct: 192 NGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMET 251
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
G PNV T+T + L ++G EA I ++M G PD + LI L A ++
Sbjct: 252 LGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDC 311
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
A V++ +M PD T+ T++ FS + + EM K H P+V TF L
Sbjct: 312 AKEVFE-KMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHV-PDVVTFTIL 369
Query: 421 LKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH 480
+ + K G E L D++ + ++ TY +I GL R ++ + A LF M
Sbjct: 370 VDALCKAGNFGEAFDTL--DVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESL 427
Query: 481 DITPRYQTCRLILD 494
+ P T + +D
Sbjct: 428 GVKPTAYTYIVFID 441
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 112/217 (51%), Gaps = 3/217 (1%)
Query: 170 TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL 229
T ++ S +G+ +A + F+ + +G N N+L++ K G+ + A ++F +
Sbjct: 893 TYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRM 952
Query: 230 -KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
K + P+ T+++ + C + RVDE +E+K G +P V+ Y+ II + +
Sbjct: 953 VKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRL 1012
Query: 289 SKVYELLDEMQ-AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNC 347
+ L +EM+ ++G P++ TY +++ L +G EEA +I +++ G +P+ FN
Sbjct: 1013 EEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNA 1072
Query: 348 LIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTM 384
LI + + + A VYQ M G +P+T T+ +
Sbjct: 1073 LIRGYSLSGKPEHAYAVYQT-MVTGGFSPNTGTYEQL 1108
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 82/178 (46%), Gaps = 3/178 (1%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
IY ++++ GK + D AL + M K G L T + ++ G+ ++ + F EL
Sbjct: 928 IYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKEL 987
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC--IPPNAHTFNIFIHGWCKINR 252
GL + NL+++ L K ++E A +F E+K+ I P+ +T+N I
Sbjct: 988 KESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGM 1047
Query: 253 VDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTY 310
V+EA E++ G P V +++ +I+ Y Y + M G PN TY
Sbjct: 1048 VEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 143 bits (360), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 181/369 (49%), Gaps = 8/369 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
G H+ Y ++++ + Q+ A+L +M K G+ + T++ ++ + + + +A
Sbjct: 111 GIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEA 170
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIH 245
V D++ G + NT T N L+ L K A ++ + K C P+ T+ + ++
Sbjct: 171 VALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGC-QPDLVTYGVVVN 229
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G CK D A + +M+ P V+ Y+TII C+ + L EM+ +G P
Sbjct: 230 GLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRP 289
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
NVVTY++++S L G + +A R+ M PD F+ LI + ++ EA +Y
Sbjct: 290 NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLY 349
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
EM + + P T++++I F H ++A + E M +HC P+V T++ L+K
Sbjct: 350 D-EMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVS-KHCFPDVVTYNTLIKGFC 407
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
K + +E + + +++ L + TY ++I GL +A C+ A +FKEM+ + P
Sbjct: 408 KYKRVEEGMEVFRE--MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPN 465
Query: 486 YQTCRLILD 494
T +LD
Sbjct: 466 IMTYNTLLD 474
Score = 132 bits (332), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 166/343 (48%), Gaps = 40/343 (11%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
IY ++D L K + MD L +EM +KG + T + ++ G+W DA R ++
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 317
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRV 253
+ + T + L+D KEGK+ A ++ E+ K I P+ T++ I+G+C +R+
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCR------------------------QYNF- 288
DEA+ + M C P V++Y+T+I+ +C+ YN
Sbjct: 378 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 437
Query: 289 ----------SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
E+ EM + G PPN++TY T++ L K+G E+A+ + E ++
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
+P +N +I + +A +V++ ++ + GV PD +NTMI+ F G E+A
Sbjct: 498 EPTIYTYNIMIEGMCKAGKVEDGWDLF-CNLSLKGVKPDVVAYNTMISGFCRKGSKEEAD 556
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDM 441
+ +EM K + PN ++ L+++ + G E ++L+ +M
Sbjct: 557 ALFKEM-KEDGTLPNSGCYNTLIRARLRDGDR-EASAELIKEM 597
Score = 120 bits (300), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 173/358 (48%), Gaps = 6/358 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDA 187
GY+ ++ + ++ L + + AL++ M +KG L T V+ G + A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHG 246
+++ LE N ++D LCK ++ A ++F E+++ I PN T++ I
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C R +A + +M +P V ++S +I ++ ++ + +L DEM + P+
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
+VTY+++++ +EA ++ E M PD +N LI + RV+E + V++
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 420
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
EM + G+ +T T+N +I G + A + +EM + PN+ T++ LL K
Sbjct: 421 -EMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS-DGVPPNIMTYNTLLDGLCK 478
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
GK ++ + ++ + + + + I TY ++I G+C+A K E + LF + + P
Sbjct: 479 NGKLEKAM--VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKP 534
Score = 102 bits (255), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 150/319 (47%), Gaps = 15/319 (4%)
Query: 35 IVSSSPIESYCSDGARLDHHQVLC--VDSPRLPDIDVIISKVHVGSSEDEVFQS--LKQD 90
+ SS I C+ G D ++L ++ PD+ + + E ++ ++ L +
Sbjct: 292 VTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDE 351
Query: 91 HVCNAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVR 148
V +I PS + LI+ F D A +F + S + Y ++ K +
Sbjct: 352 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVV-TYNTLIKGFCKYK 410
Query: 149 QMDQMRALLEEMSK----GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTE 204
++++ + EMS+ G+ VT N + + + + AG + A F E+ + G+ N
Sbjct: 411 RVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ---AGDCDMAQEIFKEMVSDGVPPNIM 467
Query: 205 TMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEM 263
T N LLD LCK GK+E A VF L +S + P +T+NI I G CK +V++ +
Sbjct: 468 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNL 527
Query: 264 KGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDF 323
G P V++Y+T+I +CR+ + + L EM+ G PN Y T++ + GD
Sbjct: 528 SLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDR 587
Query: 324 EEAIRITEKMKIVGSKPDS 342
E + + ++M+ G D+
Sbjct: 588 EASAELIKEMRSCGFAGDA 606
Score = 96.3 bits (238), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 145/303 (47%), Gaps = 10/303 (3%)
Query: 216 EGKVELARSVFLELKSCIP-PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVIS 274
E K++ A ++F E+ P P+ F+ + K+N+ D ++M+ G +
Sbjct: 59 ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYT 118
Query: 275 YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMK 334
YS +I +CR+ +L +M G PN+VT +++++ S EA+ + ++M
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178
Query: 335 IVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHH 394
+ G +P++ FN LI+ L ++ EA+ + M G PD T+ ++ G
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAMALID-RMVAKGCQPDLVTYGVVVNGLCKRGDT 237
Query: 395 EKAFHVLEEMNKLEHCK--PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDIT 452
+ AF++L NK+E K P V ++ ++ K D+ L+ L +M K + ++
Sbjct: 238 DLAFNLL---NKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALN-LFKEMETK-GIRPNVV 292
Query: 453 TYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDE-VKQKHMYDAAEKIEAV 511
TY+ +I LC + A L +MI I P T ++D VK+ + +A + + +
Sbjct: 293 TYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 512 MKK 514
+K+
Sbjct: 353 VKR 355
Score = 69.7 bits (169), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 94/195 (48%), Gaps = 10/195 (5%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKG---HIVTLNTIAKVMRRFSGAGQW 184
G ++ Y +++ L + D + + +EM S G +I+T NT+ + G+
Sbjct: 426 GLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL---LDGLCKNGKL 482
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNI 242
E A+ F+ L +E T N++++ +CK GKVE +F L LK + P+ +N
Sbjct: 483 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG-VKPDVVAYNT 541
Query: 243 FIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQG 302
I G+C+ +EA +EMK G P Y+T+I++ R + EL+ EM++ G
Sbjct: 542 MISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 601
Query: 303 CPPNVVTYTTVMSYL 317
+ T V + L
Sbjct: 602 FAGDASTIGLVTNML 616
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 142 bits (358), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 102/408 (25%), Positives = 195/408 (47%), Gaps = 17/408 (4%)
Query: 97 QPSHYLVNKLIHRF-----KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMD 151
QP + N LI+ F DD L R P + Y +M+ L ++D
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSP----DTVTYNIMIGSLCSRGKLD 210
Query: 152 -QMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLL 210
++ L + +S T+ T ++ G ++A++ DE+ + GL+ + T N ++
Sbjct: 211 LALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTII 270
Query: 211 DTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGC 268
+CKEG V+ A + LELK C P+ ++NI + + +E + + +M C
Sbjct: 271 RGMCKEGMVDRAFEMVRNLELKGC-EPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC 329
Query: 269 HPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIR 328
P V++YS +I + CR + LL M+ +G P+ +Y +++ + G + AI
Sbjct: 330 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE 389
Query: 329 ITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMF 388
E M G PD +N ++ TL + + +A+ ++ ++ E G +P++S++NTM +
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFG-KLGEVGCSPNSSSYNTMFSAL 448
Query: 389 SHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLS 448
G +A H++ EM P+ T++ ++ + G DE L+D + H S
Sbjct: 449 WSSGDKIRALHMILEMMS-NGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPS 507
Query: 449 LDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV 496
+ TY +V+ G C+A++ E A + + M+G+ P T ++++ +
Sbjct: 508 --VVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553
Score = 139 bits (351), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/394 (24%), Positives = 182/394 (46%), Gaps = 44/394 (11%)
Query: 156 LLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCK 215
+LE+ + + N + + F + +DA R D + + +T T N+++ +LC
Sbjct: 149 ILEKFGQPDVFAYNAL---INGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCS 205
Query: 216 EGKVELARSVFLELKS--CIP----------------------------------PNAHT 239
GK++LA V +L S C P P+ T
Sbjct: 206 RGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFT 265
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+N I G CK VD A ++ ++ GC P VISY+ ++++ Q + + +L+ +M
Sbjct: 266 YNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMF 325
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
++ C PNVVTY+ +++ L + G EEA+ + + MK G PD+ ++ LI R R+
Sbjct: 326 SEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLD 385
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
A+ + M +G PD +NT++ +G ++A + ++ ++ C PN +++
Sbjct: 386 VAIEFLET-MISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEV-GCSPNSSSYNT 443
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
+ + + +G L +L+ M N + D TY +I LCR + A+ L +M
Sbjct: 444 MFSALWSSGDKIRALHMILEMMSN--GIDPDEITYNSMISCLCREGMVDEAFELLVDMRS 501
Query: 480 HDITPRYQTCRLILDEVKQKH-MYDAAEKIEAVM 512
+ P T ++L + H + DA +E+++
Sbjct: 502 CEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMV 535
Score = 82.4 bits (202), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 113/231 (48%), Gaps = 8/231 (3%)
Query: 137 YEMMVDIL---GKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDE 193
Y +++ L GK+ + + L++E KG + ++ F G+ + A+ +
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKE--KGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 393
Query: 194 LGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFN-IFIHGWCKIN 251
+ + G + N +L TLCK GK + A +F +L PN+ ++N +F W +
Sbjct: 394 MISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGD 453
Query: 252 RVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYT 311
++ A I EM +G P I+Y+++I CR+ + +ELL +M++ P+VVTY
Sbjct: 454 KI-RALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYN 512
Query: 312 TVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAV 362
V+ K+ E+AI + E M G +P+ + LI +G A EA+
Sbjct: 513 IVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAM 563
Score = 79.0 bits (193), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 91/199 (45%), Gaps = 2/199 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y+ ++ + ++D LE M S G + + V+ G+ + A+ F +LG
Sbjct: 371 YDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLG 430
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCKINRVD 254
G N+ + N + L G A + LE+ S I P+ T+N I C+ VD
Sbjct: 431 EVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVD 490
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA + +M+ HP V++Y+ ++ +C+ + +L+ M GC PN TYT ++
Sbjct: 491 EAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLI 550
Query: 315 SYLAKSGDFEEAIRITEKM 333
+ +G EA+ + +
Sbjct: 551 EGIGFAGYRAEAMELANDL 569
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 142 bits (358), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 174/342 (50%), Gaps = 15/342 (4%)
Query: 168 LNTIAKVMRRFSGAGQWEDAVRTFDE-LGTFGLEKNTETMNLLLDTLCKEGKVELARSVF 226
L+ IAK M++F D V + E + G+ N T N+L++ C+ ++ LA ++
Sbjct: 17 LSAIAK-MKKF-------DLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 68
Query: 227 LEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQ 285
++ K P+ T + ++G+C R+ +A + +M G P I+++T+I
Sbjct: 69 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 128
Query: 286 YNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFF 345
S+ L+D M +GC PN+VTY V++ L K GD + A + KM+ + D F
Sbjct: 129 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIF 188
Query: 346 NCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMN 405
N +I +L + V +A+ +++ EM G+ P+ T++++I+ +G A +L +M
Sbjct: 189 NTIIDSLCKYRHVDDALNLFK-EMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 406 KLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRAN 465
+ + PN+ TF+ L+ + K GK E +L DDM+ K + DI TY +I+G C +
Sbjct: 248 E-KKINPNLVTFNALIDAFVKEGKFVEA-EKLHDDMI-KRSIDPDIFTYNSLINGFCMHD 304
Query: 466 KCEWAYLLFKEMIGHDITPRYQTCR-LILDEVKQKHMYDAAE 506
+ + A +F+ M+ D P T LI K K + D E
Sbjct: 305 RLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTE 346
Score = 136 bits (343), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 189/389 (48%), Gaps = 8/389 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
G H+ Y ++++ + Q+ ALL +M K G+ ++ T++ ++ + + DA
Sbjct: 40 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 99
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIH 245
V D++ G +T T L+ L K A ++ + + C PN T+ + ++
Sbjct: 100 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGC-QPNLVTYGVVVN 158
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G CK +D A + +M+ V+ ++TII S C+ + L EM+ +G P
Sbjct: 159 GLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRP 218
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
NVVTY++++S L G + +A ++ M P+ FN LI + + EA ++
Sbjct: 219 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLH 278
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
+M + + PD T+N++I F H +KA + E M + C P++ T++ L+K
Sbjct: 279 D-DMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVS-KDCFPDLDTYNTLIKGFC 336
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
K+ + ++ ++L +M ++ L D TYT +I GL C+ A +FK+M+ + P
Sbjct: 337 KSKRVEDG-TELFREMSHRG-LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 394
Query: 486 YQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
T ++LD + + A ++ M+K
Sbjct: 395 IMTYSILLDGLCNNGKLEKALEVFDYMQK 423
Score = 119 bits (297), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 169/366 (46%), Gaps = 15/366 (4%)
Query: 131 EHSSEIYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVR 189
E I+ ++D L K R +D L +EM +KG + T + ++ G+W DA +
Sbjct: 182 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 241
Query: 190 TFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWC 248
++ + N T N L+D KEGK A + ++ K I P+ T+N I+G+C
Sbjct: 242 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFC 301
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
+R+D+A+ + M C P + +Y+T+I+ +C+ EL EM +G + V
Sbjct: 302 MHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 361
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
TYTT++ L GD + A ++ ++M G PD ++ L+ L ++++A+ V+
Sbjct: 362 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY- 420
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
M ++ + D + TMI G + + + ++ L+ KPNV T++ ++
Sbjct: 421 MQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS-LKGVKPNVVTYNTMISGLCSKR 479
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQT 488
E + LL M L D TY +I R + L +EM ++
Sbjct: 480 LLQEAYA-LLKKMKEDGPLP-DSGTYNTLIRAHLRDGDKAASAELIREM---------RS 528
Query: 489 CRLILD 494
CR + D
Sbjct: 529 CRFVGD 534
Score = 92.4 bits (228), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 135/288 (46%), Gaps = 8/288 (2%)
Query: 229 LKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
+KS P+ FN + K+ + D ++M+ G + +Y+ +I +CR+
Sbjct: 2 VKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQI 61
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
S LL +M G P++VT +++++ +A+ + ++M +G +PD+ F L
Sbjct: 62 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 121
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
I+ L ++ EAV + M + G P+ T+ ++ G + AF++L NK+E
Sbjct: 122 IHGLFLHNKASEAVALVD-RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLL---NKME 177
Query: 409 HCK--PNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANK 466
K +V F+ ++ S K D+ L+ L +M K + ++ TY+ +I LC +
Sbjct: 178 AAKIEADVVIFNTIIDSLCKYRHVDDALN-LFKEMETK-GIRPNVVTYSSLISCLCSYGR 235
Query: 467 CEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
A L +MI I P T ++D ++ + AEK+ M K
Sbjct: 236 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIK 283
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 142 bits (358), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 170/346 (49%), Gaps = 5/346 (1%)
Query: 170 TIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL 229
TI ++ F + DAV D++ G + + N ++D+LCK +V A F E+
Sbjct: 157 TIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEI 216
Query: 230 -KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNF 288
+ I PN T+ ++G C +R +A + +M P VI+YS ++ ++ +
Sbjct: 217 ERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKV 276
Query: 289 SKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCL 348
+ EL +EM P++VTY+++++ L +EA ++ + M G D +N L
Sbjct: 277 LEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTL 336
Query: 349 IYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLE 408
I +A RV++ + +++ EM + G+ +T T+NT+I F G +KA +M+
Sbjct: 337 INGFCKAKRVEDGMKLFR-EMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMD-FF 394
Query: 409 HCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCE 468
P++ T++ LL G+ ++ L + +DM K + LDI TYT VI G+C+ K E
Sbjct: 395 GISPDIWTYNILLGGLCDNGELEKALV-IFEDM-QKREMDLDIVTYTTVIRGMCKTGKVE 452
Query: 469 WAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
A+ LF + + P T ++ + K + E + MK+
Sbjct: 453 EAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQ 498
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 148/336 (44%), Gaps = 41/336 (12%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDA 187
GY+ Y ++D L K ++++ +E+ KG + T ++ + +W DA
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHG 246
R ++ + N T + LLD K GKV A+ +F E+ + I P+ T++ I+G
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C +R+DEA M GC V+SY+T+I +C+ +L EM +G N
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
VTY T++ ++GD ++A +M G PD I+T
Sbjct: 365 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPD-------IWT--------------- 402
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
+N ++ +G EKA + E+M K E ++ T+ +++ K
Sbjct: 403 --------------YNILLGGLCDNGELEKALVIFEDMQKREM-DLDIVTYTTVIRGMCK 447
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLC 462
TGK +E S ++ L DI TYT ++ GLC
Sbjct: 448 TGKVEEAWSLFCS--LSLKGLKPDIVTYTTMMSGLC 481
Score = 95.9 bits (237), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 131/268 (48%), Gaps = 5/268 (1%)
Query: 212 TLCKEGKVELARSVFLELKSCIP-PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHP 270
T ++ K+ A +F ++ P P+ FN + K+ + D ++M+ G
Sbjct: 59 TRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRN 118
Query: 271 CVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRIT 330
+ +++ +I +C + S +L +M G P+ VT ++++ + +A+ +
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178
Query: 331 EKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSH 390
+KM +G KPD +N +I +L + RV +A ++ E+ G+ P+ T+ ++ +
Sbjct: 179 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFK-EIERKGIRPNVVTYTALVNGLCN 237
Query: 391 HGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLD 450
A +L +M K + PNV T+ LL + K GK E +L ++MV + + D
Sbjct: 238 SSRWSDAARLLSDMIK-KKITPNVITYSALLDAFVKNGKVLEA-KELFEEMV-RMSIDPD 294
Query: 451 ITTYTLVIHGLCRANKCEWAYLLFKEMI 478
I TY+ +I+GLC ++ + A +F M+
Sbjct: 295 IVTYSSLINGLCLHDRIDEANQMFDLMV 322
>sp|Q9SSF9|PP123_ARATH Pentatricopeptide repeat-containing protein At1g74750
OS=Arabidopsis thaliana GN=At1g74750 PE=2 SV=1
Length = 855
Score = 142 bits (357), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 106/435 (24%), Positives = 201/435 (46%), Gaps = 35/435 (8%)
Query: 10 KQARIPLNPLTSRIRFHSSSENCSHIVSSS-------PIESYCSDGARLDHHQVLCVDSP 62
K+ +P P T R+ +S C + V SS +E + + +P
Sbjct: 230 KRKIMPQRPYTDSTRY--ASGGCDYSVHSSDDRTIISSVEGFGKPSREMMKVTPRTAPTP 287
Query: 63 R--------LPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDW 114
R + ++ I+ + G + +E + + Y N+++ + D++
Sbjct: 288 RQHCNPGYVVENVSSILRRFKWGHAAEEALHNF-------GFRMDAYQANQVLKQM-DNY 339
Query: 115 KSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS----KGHIVTLNT 170
+ALG F W PG++H Y MV LG+ +Q ++ LL+EM K + VT N
Sbjct: 340 ANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYN- 398
Query: 171 IAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELK 230
+++ + A ++A+ F+++ G E + T L+D K G +++A ++ ++
Sbjct: 399 --RLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQ 456
Query: 231 -SCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFS 289
+ + P+ T+++ I+ K + A EM G GC P +++++ +I + + N+
Sbjct: 457 EAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYE 516
Query: 290 KVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLI 349
+L +MQ G P+ VTY+ VM L G EEA + +M+ PD + L+
Sbjct: 517 TALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLV 576
Query: 350 YTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEH 409
G+A V +A YQ M + G+ P+ T N++++ F +A+++L+ M L
Sbjct: 577 DLWGKAGNVDKAWQWYQA-MLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLAL-G 634
Query: 410 CKPNVQTFHPLLKSC 424
P++QT+ LL C
Sbjct: 635 LHPSLQTYTLLLSCC 649
Score = 105 bits (263), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 88/400 (22%), Positives = 173/400 (43%), Gaps = 21/400 (5%)
Query: 124 AGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK--------GHIVTLNTIAKVM 175
+G C HSS+ ++ + G + +M + + G++V ++ ++
Sbjct: 247 SGGCDYSVHSSDDRTIISSVEGFGKPSREMMKVTPRTAPTPRQHCNPGYVV--ENVSSIL 304
Query: 176 RRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPP 235
RRF +W A + L FG + N +L + L +L+ +
Sbjct: 305 RRF----KWGHAAE--EALHNFGFRMDAYQANQVLKQMDNYANA-LGFFYWLKRQPGFKH 357
Query: 236 NAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELL 295
+ HT+ + + + E + EM GC P ++Y+ +I SY R + +
Sbjct: 358 DGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVF 417
Query: 296 DEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRA 355
++MQ GC P+ VTY T++ AK+G + A+ + ++M+ G PD+ ++ +I LG+A
Sbjct: 418 NQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKA 477
Query: 356 SRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQ 415
+ A ++ EM G P+ TFN MI + + ++E A + +M +P+
Sbjct: 478 GHLPAAHRLF-CEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGF-QPDKV 535
Query: 416 TFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFK 475
T+ +++ G +E + +M K+ + D Y L++ +A + A+ ++
Sbjct: 536 TYSIVMEVLGHCGFLEEA-EGVFAEMQRKNWVP-DEPVYGLLVDLWGKAGNVDKAWQWYQ 593
Query: 476 EMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
M+ + P TC +L + H A + M L
Sbjct: 594 AMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLAL 633
>sp|Q9SIC9|PP178_ARATH Pentatricopeptide repeat-containing protein At2g31400,
chloroplastic OS=Arabidopsis thaliana GN=At2g31400 PE=2
SV=1
Length = 918
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/434 (24%), Positives = 203/434 (46%), Gaps = 16/434 (3%)
Query: 78 SSEDEVFQSLK---QDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPGYEH-S 133
S +DE+F SL + +C + Y++ +L +R + D A+G + +A ++
Sbjct: 176 SGDDEMFHSLMLSFESKLCGS-DDCTYIIRELGNRNECD--KAVGFYEFAVKRERRKNEQ 232
Query: 134 SEIYEMMVDILGKVRQMDQMRALLE-EMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFD 192
++ M+ LG+ ++ + + E + G+ T+ + ++ + +G E+A+ F+
Sbjct: 233 GKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFN 292
Query: 193 ELGTFGLEKNTETMNLLLDTLCKEGKVELAR--SVFLEL-KSCIPPNAHTFNIFIHGWCK 249
+ +GL N T N ++D C +G +E + F E+ ++ + P+ TFN + +
Sbjct: 293 SMKEYGLRPNLVTYNAVIDA-CGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSR 351
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
+ A+ EM V SY+T++ + C+ +E+L +M + PNVV+
Sbjct: 352 GGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVS 411
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM 369
Y+TV+ AK+G F+EA+ + +M+ +G D +N L+ + R +EA+ + + EM
Sbjct: 412 YSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILR-EM 470
Query: 370 PENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
G+ D T+N ++ + G +++ V EM K EH PN+ T+ L+ K G
Sbjct: 471 ASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEM-KREHVLPNLLTYSTLIDGYSKGGL 529
Query: 430 TDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTC 489
E + + L D+ Y+ +I LC+ A L EM I+P T
Sbjct: 530 YKEAMEIFRE--FKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTY 587
Query: 490 RLILDEVKQKHMYD 503
I+D + D
Sbjct: 588 NSIIDAFGRSATMD 601
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 116/469 (24%), Positives = 200/469 (42%), Gaps = 39/469 (8%)
Query: 62 PRLPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDD--WKSALG 119
P L + +I G E + + N +QP N L+ W++A
Sbjct: 301 PNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARN 360
Query: 120 IFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRF 178
+F + E Y ++D + K QMD +L +M I+ + + + V+ F
Sbjct: 361 LFDEM-TNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGF 419
Query: 179 SGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNA 237
+ AG++++A+ F E+ G+ + + N LL K G+ E A + E+ S I +
Sbjct: 420 AKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDV 479
Query: 238 HTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDE 297
T+N + G+ K + DE + EMK P +++YST+I Y + + + E+ E
Sbjct: 480 VTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFRE 539
Query: 298 MQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASR 357
++ G +VV Y+ ++ L K+G A+ + ++M G P+ +N +I GR++
Sbjct: 540 FKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSAT 599
Query: 358 V-QEAVYVYQVEMPENGVAPDTST---FNTMITMFSH--------------HGHHEKA-- 397
+ + A Y +P + A T N +I +F G E +
Sbjct: 600 MDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCI 659
Query: 398 FHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLV 457
V +M++LE KPNV TF +L +C + ++ S LL+++ D Y V
Sbjct: 660 LEVFRKMHQLE-IKPNVVTFSAILNACSRCNSFEDA-SMLLEEL-----RLFDNKVYG-V 711
Query: 458 IHGLC---RANKCEWAYLLF---KEMIGHDITPRYQTCRLILDEVKQKH 500
+HGL R N A LF EM G + Y +L QK
Sbjct: 712 VHGLLMGQRENVWLQAQSLFDKVNEMDGSTASAFYNALTDMLWHFGQKR 760
Score = 89.0 bits (219), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 121/267 (45%), Gaps = 5/267 (1%)
Query: 249 KINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
+ +V A+ + G V ++S +I +Y R + + + M+ G PN+V
Sbjct: 245 RYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLV 304
Query: 309 TYTTVMSYLAKSG-DFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
TY V+ K G +F++ + ++M+ G +PD FN L+ R + A ++
Sbjct: 305 TYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFD- 363
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKT 427
EM + D ++NT++ G + AF +L +M ++ PNV ++ ++ K
Sbjct: 364 EMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQM-PVKRIMPNVVSYSTVIDGFAKA 422
Query: 428 GKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
G+ DE L+ L +M ++LD +Y ++ + + E A + +EM I
Sbjct: 423 GRFDEALN-LFGEM-RYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVV 480
Query: 488 TCRLILDEVKQKHMYDAAEKIEAVMKK 514
T +L ++ YD +K+ MK+
Sbjct: 481 TYNALLGGYGKQGKYDEVKKVFTEMKR 507
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 92/206 (44%), Gaps = 5/206 (2%)
Query: 311 TTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMP 370
+ ++S L + G A RI E G F+ LI GR+ +EA+ V+ M
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFN-SMK 295
Query: 371 ENGVAPDTSTFNTMITMFSHHG-HHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGK 429
E G+ P+ T+N +I G ++ +EM + +P+ TF+ LL C + G
Sbjct: 296 EYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQR-NGVQPDRITFNSLLAVCSRGGL 354
Query: 430 TDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTC 489
E L D+M N+ + D+ +Y ++ +C+ + + A+ + +M I P +
Sbjct: 355 W-EAARNLFDEMTNRR-IEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSY 412
Query: 490 RLILDEVKQKHMYDAAEKIEAVMKKL 515
++D + +D A + M+ L
Sbjct: 413 STVIDGFAKAGRFDEALNLFGEMRYL 438
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/425 (24%), Positives = 203/425 (47%), Gaps = 16/425 (3%)
Query: 90 DHVCNAIQ----PSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDI 143
D C IQ PS +K++ + ++ + +F C G H Y ++++
Sbjct: 55 DLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVC-GIGHDLYSYNIVINC 113
Query: 144 LGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKN 202
L + + +++ +M K G+ + T++ ++ F + DA+ ++ G +
Sbjct: 114 LCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPD 173
Query: 203 TETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQ 261
N ++D CK G V A +F + + + +A T+N + G C R +A ++
Sbjct: 174 VVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMR 233
Query: 262 EMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSG 321
+M P VI+++ +I + ++ FS+ +L +EM + P+V TY ++++ L G
Sbjct: 234 DMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHG 293
Query: 322 DFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTF 381
+EA ++ + M G PD +N LI ++ RV E +++ EM + G+ DT T+
Sbjct: 294 RVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFR-EMAQRGLVGDTITY 352
Query: 382 NTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDM 441
NT+I + G + A + M+ +PN++T+ LL + ++ L +L +
Sbjct: 353 NTIIQGYFQAGRPDAAQEIFSRMDS----RPNIRTYSILLYGLCMNWRVEKAL--VLFEN 406
Query: 442 VNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHM 501
+ K + LDITTY +VIHG+C+ E A+ LF+ + + P + ++ +K
Sbjct: 407 MQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQ 466
Query: 502 YDAAE 506
+D ++
Sbjct: 467 WDKSD 471
Score = 85.5 bits (210), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 125/272 (45%), Gaps = 25/272 (9%)
Query: 46 SDGARLDHHQVLCVDSPRLPDIDVIISKVHVGSSEDEVFQSLK--QDHVCNAIQPSHYLV 103
SD ARL V+ +P++ + + V E + +++K ++ + P +
Sbjct: 226 SDAARLMRDMVM---RDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTY 282
Query: 104 NKLI-----HRFKDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLE 158
N LI H D+ K L + G P Y +++ K +++D+ L
Sbjct: 283 NSLINGLCMHGRVDEAKQMLDLMVTKGCLP----DVVTYNTLINGFCKSKRVDEGTKLFR 338
Query: 159 EMSK----GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLC 214
EM++ G +T NTI ++ + AG+ + A F + + N T ++LL LC
Sbjct: 339 EMAQRGLVGDTITYNTI---IQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLC 392
Query: 215 KEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVI 273
+VE A +F + KS I + T+NI IHG CKI V++A + + G P V+
Sbjct: 393 MNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVV 452
Query: 274 SYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
SY+T+I +CR+ + K L +MQ G P
Sbjct: 453 SYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 99/196 (50%), Gaps = 4/196 (2%)
Query: 145 GKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTE 204
G+V + QM L+ ++KG + + T ++ F + + ++ + F E+ GL +T
Sbjct: 293 GRVDEAKQMLDLM--VTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTI 350
Query: 205 TMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMK 264
T N ++ + G+ + A+ +F + S PN T++I ++G C RV++A + M+
Sbjct: 351 TYNTIIQGYFQAGRPDAAQEIFSRMDS--RPNIRTYSILLYGLCMNWRVEKALVLFENMQ 408
Query: 265 GHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFE 324
+ +Y+ +I C+ N ++L + +G P+VV+YTT++S + ++
Sbjct: 409 KSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWD 468
Query: 325 EAIRITEKMKIVGSKP 340
++ + KM+ G P
Sbjct: 469 KSDLLYRKMQEDGLLP 484
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 103/210 (49%), Gaps = 4/210 (1%)
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
P++V ++ V+S +AKS +++ I + M++ G D +N +I L R SR A+ V
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
+M + G PD T +++I F A ++ +M ++ +P+V ++ ++
Sbjct: 127 VG-KMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGF-RPDVVIYNTIIDGS 184
Query: 425 FKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
K G ++ + +L D M + + D TY ++ GLC + + A L ++M+ DI P
Sbjct: 185 CKIGLVNDAV-ELFDRM-ERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVP 242
Query: 485 RYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
T ++D ++ + A K+ M +
Sbjct: 243 NVITFTAVIDVFVKEGKFSEAMKLYEEMTR 272
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 183/361 (50%), Gaps = 12/361 (3%)
Query: 133 SSEIYEMMVDILGKVRQMDQMRALLEEMSKGH----IVTLNTIAKVMRRFSGAGQWEDAV 188
S + E++ + L + ++D L +M K IV N K++ + ++E +
Sbjct: 47 SGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFN---KLLSAVAKMNKFELVI 103
Query: 189 RTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGW 247
+++ T G+ + T ++ ++ C+ ++ LA +V ++ K P+ T + ++G+
Sbjct: 104 SLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGY 163
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
C R+ +A + +M G P +++T+I S+ L+D+M +GC P++
Sbjct: 164 CHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDL 223
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
VTY TV++ L K GD + A+ + +KM+ + D +N +I L + + +A+ ++
Sbjct: 224 VTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLF-T 282
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKT 427
EM G+ PD T++++I+ ++G A +L +M + PNV TF L+ + K
Sbjct: 283 EMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIE-RKINPNVVTFSALIDAFVKE 341
Query: 428 GKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQ 487
GK E +L D+M+ K + DI TY+ +I+G C ++ + A +F+ MI D P
Sbjct: 342 GKLVEA-EKLYDEMI-KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 399
Query: 488 T 488
T
Sbjct: 400 T 400
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 169/344 (49%), Gaps = 6/344 (1%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
IY ++D L K + MD L EM +KG + T + ++ G+W DA R ++
Sbjct: 260 IYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 319
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRV 253
+ N T + L+D KEGK+ A ++ E+ K I P+ T++ I+G+C +R+
Sbjct: 320 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 379
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTV 313
DEA+ + M C P V++YST+I+ +C+ + EL EM +G N VTYTT+
Sbjct: 380 DEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTL 439
Query: 314 MSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENG 373
+ ++ D + A + ++M VG P+ +N L+ L + ++ +A+ V++ + +
Sbjct: 440 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEY-LQRST 498
Query: 374 VAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDEC 433
+ PD T+N MI G E + + ++ L+ PNV ++ ++ + G +E
Sbjct: 499 MEPDIYTYNIMIEGMCKAGKVEDGWELFCNLS-LKGVSPNVIAYNTMISGFCRKGSKEEA 557
Query: 434 LSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
S LL M L + TY +I R E + L KEM
Sbjct: 558 DS-LLKKMKEDGPLP-NSGTYNTLIRARLRDGDREASAELIKEM 599
Score = 135 bits (340), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 181/369 (49%), Gaps = 8/369 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
G H Y + ++ + Q+ A+L +M K G+ + T++ ++ + + + DA
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL--KSCIPPNAHTFNIFIH 245
V D++ G + +T T L+ L K A ++ ++ + C P+ T+ ++
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGC-QPDLVTYGTVVN 231
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G CK +D A +++M+ V+ Y+TII C+ + L EM +G P
Sbjct: 232 GLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRP 291
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
+V TY++++S L G + +A R+ M P+ F+ LI + ++ EA +Y
Sbjct: 292 DVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 351
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
EM + + PD T++++I F H ++A H+ E M + C PNV T+ L+K
Sbjct: 352 D-EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS-KDCFPNVVTYSTLIKGFC 409
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
K + +E + +L +M ++ L + TYT +IHG +A C+ A ++FK+M+ + P
Sbjct: 410 KAKRVEEGM-ELFREM-SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPN 467
Query: 486 YQTCRLILD 494
T ++LD
Sbjct: 468 ILTYNILLD 476
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 167/365 (45%), Gaps = 40/365 (10%)
Query: 186 DAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFI 244
+AV D++ G + + T +++ LCK G ++LA S+ ++ K I + +N I
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTII 265
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
G CK +D+A EM G P V +YS++I C +S LL +M +
Sbjct: 266 DGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKIN 325
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKM------------------------------- 333
PNVVT++ ++ K G EA ++ ++M
Sbjct: 326 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 385
Query: 334 -KIVGSK---PDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFS 389
+++ SK P+ ++ LI +A RV+E + +++ EM + G+ +T T+ T+I F
Sbjct: 386 FELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR-EMSQRGLVGNTVTYTTLIHGFF 444
Query: 390 HHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSL 449
+ A V ++M + PN+ T++ LL K GK + + ++ + + + +
Sbjct: 445 QARDCDNAQMVFKQMVSV-GVHPNILTYNILLDGLCKNGKLAKAM--VVFEYLQRSTMEP 501
Query: 450 DITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIE 509
DI TY ++I G+C+A K E + LF + ++P ++ +K + A+ +
Sbjct: 502 DIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLL 561
Query: 510 AVMKK 514
MK+
Sbjct: 562 KKMKE 566
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 108/208 (51%), Gaps = 2/208 (0%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++ K +++++ L EMS +G + T ++ F A ++A F ++
Sbjct: 401 YSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 460
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
+ G+ N T N+LLD LCK GK+ A VF L +S + P+ +T+NI I G CK +V+
Sbjct: 461 SVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVE 520
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
+ + G P VI+Y+T+I +CR+ + + LL +M+ G PN TY T++
Sbjct: 521 DGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLI 580
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDS 342
+ GD E + + ++M+ G D+
Sbjct: 581 RARLRDGDREASAELIKEMRSCGFAGDA 608
>sp|Q9SAH2|PP137_ARATH Pentatricopeptide repeat-containing protein At1g80880,
mitochondrial OS=Arabidopsis thaliana GN=At1g80880 PE=2
SV=1
Length = 540
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 112/409 (27%), Positives = 186/409 (45%), Gaps = 15/409 (3%)
Query: 70 IISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSCPG 129
+I +V SE + SL+ ++ +H LI +D+W+ A F+W G G
Sbjct: 97 LIRQVSELESEADAMASLED----SSFDLNHDSFYSLIWELRDEWRLAFLAFKW-GEKRG 151
Query: 130 YEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVR 189
+ ++M+ +LG ++ + L+ +M T + +M R++ A A+R
Sbjct: 152 CDDQKSC-DLMIWVLGNHQKFNIAWCLIRDMFNVSKDTRKAMFLMMDRYAAANDTSQAIR 210
Query: 190 TFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCK 249
TFD + F E LL LC+ G +E A L K P + FN+ ++GWC
Sbjct: 211 TFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFMLASKKLFPVDVEGFNVILNGWCN 270
Query: 250 I-NRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVV 308
I V EA+ +EM + P SYS +I + + N L DEM+ +G P +
Sbjct: 271 IWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIE 330
Query: 309 TYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVE 368
Y +++ L + F+EA+++ +K+ G KPDS +N +I L A ++ A V
Sbjct: 331 VYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATM 390
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTG 428
+ EN ++P TF+ F + EK VL +M K+ P +TF +L FK G
Sbjct: 391 ISEN-LSPTVDTFHA----FLEAVNFEKTLEVLGQM-KISDLGPTEETFLLILGKLFK-G 443
Query: 429 KTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
K E ++ +M ++ + + Y I GL E A ++ EM
Sbjct: 444 KQPENALKIWAEM-DRFEIVANPALYLATIQGLLSCGWLEKAREIYSEM 491
Score = 48.9 bits (115), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 4/139 (2%)
Query: 358 VQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTF 417
V EA +++ EM + P+ +++ MI+ FS G+ + + +EM K P ++ +
Sbjct: 275 VTEAKRIWR-EMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKK-RGLAPGIEVY 332
Query: 418 HPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEM 477
+ L+ + DE + L +N+ L D TY +I LC A K + A + M
Sbjct: 333 NSLVYVLTREDCFDEAMK--LMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATM 390
Query: 478 IGHDITPRYQTCRLILDEV 496
I +++P T L+ V
Sbjct: 391 ISENLSPTVDTFHAFLEAV 409
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 174/360 (48%), Gaps = 6/360 (1%)
Query: 127 CPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWED 186
C G Y++++D L K+++++ ++LL EM + N ++ G+ D
Sbjct: 270 CKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNAD 329
Query: 187 AVRTF-DELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFI 244
A + E+ + G+ + + + KEG +E A+++F + S + P A + I
Sbjct: 330 AAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLI 389
Query: 245 HGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCP 304
G+C+ V + + EMK +Y T+++ C + Y ++ EM A GC
Sbjct: 390 EGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCR 449
Query: 305 PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYV 364
PNVV YTT++ ++ F +A+R+ ++MK G PD +N LI L +A R+ EA
Sbjct: 450 PNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEA-RS 508
Query: 365 YQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
+ VEM ENG+ P+ T+ I+ + A ++EM + PN L+
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMREC-GVLPNKVLCTGLINEY 567
Query: 425 FKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
K GK E S MV++ L D TYT++++GL + +K + A +F+EM G I P
Sbjct: 568 CKKGKVIEACSA-YRSMVDQGILG-DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAP 625
Score = 135 bits (340), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 156/326 (47%), Gaps = 17/326 (5%)
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIH 245
A R+ + G G + +T +L++ L K KV+ A +F E++ I P+ ++ + I+
Sbjct: 579 AYRSMVDQGILG---DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLIN 635
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G+ K+ + +A EM G P VI Y+ ++ +CR K ELLDEM +G P
Sbjct: 636 GFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHP 695
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
N VTY T++ KSGD EA R+ ++MK+ G PDS + L+ R + V+ A+ ++
Sbjct: 696 NAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF 755
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKL------EHCKPNVQTFHP 419
+ G A T+ FN +I G E VL N+L KPN T++
Sbjct: 756 GTN--KKGCASSTAPFNALINWVFKFGKTELKTEVL---NRLMDGSFDRFGKPNDVTYNI 810
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
++ K G E +L M N +L + TYT +++G + + + +F E I
Sbjct: 811 MIDYLCKEGNL-EAAKELFHQMQN-ANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIA 868
Query: 480 HDITPRYQTCRLILDEVKQKHMYDAA 505
I P + +I++ ++ M A
Sbjct: 869 AGIEPDHIMYSVIINAFLKEGMTTKA 894
Score = 119 bits (297), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 147/302 (48%), Gaps = 5/302 (1%)
Query: 174 VMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSC 232
+++ F ++ DA+R E+ G+ + N L+ L K +++ ARS +E+ ++
Sbjct: 458 LIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENG 517
Query: 233 IPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVY 292
+ PNA T+ FI G+ + + A ++EM+ G P + + +I YC++ +
Sbjct: 518 LKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEAC 577
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
M QG + TYT +M+ L K+ ++A I +M+ G PD + LI
Sbjct: 578 SAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGF 637
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
+ +Q+A ++ EM E G+ P+ +N ++ F G EKA +L+EM+ ++ P
Sbjct: 638 SKLGNMQKASSIFD-EMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMS-VKGLHP 695
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
N T+ ++ K+G E +L D+M K L D YT ++ G CR N E A
Sbjct: 696 NAVTYCTIIDGYCKSGDLAEAF-RLFDEMKLK-GLVPDSFVYTTLVDGCCRLNDVERAIT 753
Query: 473 LF 474
+F
Sbjct: 754 IF 755
Score = 89.7 bits (221), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 146/328 (44%), Gaps = 26/328 (7%)
Query: 202 NTETMNLLLDTLCKEGKVELARSVF-----------------LELKSC-----IPPNAHT 239
+ +T ++L+ C+ G V+L + V L+LK + P +T
Sbjct: 220 DVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYT 279
Query: 240 FNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQ 299
+++ I G CKI R+++A+ + EM G +YS +I + N L+ EM
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMV 339
Query: 300 AQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQ 359
+ G Y + ++K G E+A + + M G P ++ + LI R V+
Sbjct: 340 SHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVR 399
Query: 360 EAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHP 419
+ Y VEM + + T+ T++ G + A+++++EM C+PNV +
Sbjct: 400 QG-YELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIA-SGCRPNVVIYTT 457
Query: 420 LLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIG 479
L+K+ + + + + ++L +M + ++ DI Y +I GL +A + + A EM+
Sbjct: 458 LIKTFLQNSRFGDAM-RVLKEM-KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVE 515
Query: 480 HDITPRYQTCRLILDEVKQKHMYDAAEK 507
+ + P T + + + +A+K
Sbjct: 516 NGLKPNAFTYGAFISGYIEASEFASADK 543
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 154/367 (41%), Gaps = 24/367 (6%)
Query: 81 DEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAGSC------PGYEHSS 134
+E+F+ ++ I P + LI+ F S LG + A S G +
Sbjct: 612 EEIFREMRG----KGIAPDVFSYGVLINGF-----SKLGNMQKASSIFDEMVEEGLTPNV 662
Query: 135 EIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDE 193
IY M++ + ++++ + LL+EMS KG T ++ + +G +A R FDE
Sbjct: 663 IIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDE 722
Query: 194 LGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHGWCKINRV 253
+ GL ++ L+D C+ VE A ++F K + FN I+ K +
Sbjct: 723 MKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKT 782
Query: 254 DEAQWTIQEMKGHG----CHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
+ + + P ++Y+ +I C++ N EL +MQ P V+T
Sbjct: 783 ELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVIT 842
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEM 369
YT++++ K G E + ++ G +PD ++ +I + +A+ +
Sbjct: 843 YTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMF 902
Query: 370 PEN----GVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
+N G ST +++ F+ G E A V+E M +L++ + + +SC
Sbjct: 903 AKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCI 962
Query: 426 KTGKTDE 432
+ + E
Sbjct: 963 SSNQRVE 969
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 86/429 (20%), Positives = 152/429 (35%), Gaps = 49/429 (11%)
Query: 112 DDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTI 171
DD L F W S E + + + L ++ +++E M
Sbjct: 75 DDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERM----------- 123
Query: 172 AKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF----- 226
+ R + A W VR E G + +L D +G +E A VF
Sbjct: 124 --IERNWPVAEVWSSIVRCSQEF--VGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMG 179
Query: 227 LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQ- 285
LEL P + + + NR+D + M V +Y +I ++CR
Sbjct: 180 LEL----VPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAG 235
Query: 286 --------------------YNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEE 325
N +L + M +G P TY ++ L K E+
Sbjct: 236 NVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLED 295
Query: 326 AIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMI 385
A + +M +G D+ ++ LI L + A + EM +G+ ++ I
Sbjct: 296 AKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVH-EMVSHGINIKPYMYDCCI 354
Query: 386 TMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKH 445
+ S G EKA + + M P Q + L++ + + L++ + K
Sbjct: 355 CVMSKEGVMEKAKALFDGMIA-SGLIPQAQAYASLIEGYCREKNVRQGYELLVE--MKKR 411
Query: 446 HLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAA 505
++ + TY V+ G+C + + AY + KEMI P ++ Q + A
Sbjct: 412 NIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDA 471
Query: 506 EKIEAVMKK 514
++ MK+
Sbjct: 472 MRVLKEMKE 480
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 139 bits (349), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 167/317 (52%), Gaps = 5/317 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
G + Y ++++ L K Q + E+M + G L T VM + G+ +DA
Sbjct: 228 GLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDA 287
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHG 246
+ FDE+ G+ N T N L+ LC+E K+ A V ++KS I PN T+N I G
Sbjct: 288 FQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDG 347
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
+C + ++ +A +++K G P +++Y+ ++ +CR+ + S +++ EM+ +G P+
Sbjct: 348 FCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPS 407
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
VTYT ++ A+S + E+AI++ M+ +G PD ++ LI+ ++ EA +++
Sbjct: 408 KVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFK 467
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
M E P+ +NTMI + G +A +L+EM + E PNV ++ +++ K
Sbjct: 468 -SMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKE-LAPNVASYRYMIEVLCK 525
Query: 427 TGKTDECLSQLLDDMVN 443
K+ E +L++ M++
Sbjct: 526 ERKSKEA-ERLVEKMID 541
Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 176/382 (46%), Gaps = 41/382 (10%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
G+ + IY ++D K ++++ + L EM K G + T ++ G +
Sbjct: 193 GFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQG 252
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHG 246
++++ G+ N T N +++ LCK+G+ + A VF E++ + N T+N I G
Sbjct: 253 FEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGG 312
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C+ +++EA + +MK G +P +I+Y+T+I +C K L +++++G P+
Sbjct: 313 LCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPS 372
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
+VTY ++S + GD A ++ ++M+ G KP + LI T R+ +++A+ + +
Sbjct: 373 LVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQL-R 431
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
+ M E G+ PD T++ +I F G +A + + M + ++C+PN
Sbjct: 432 LSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVE-KNCEPNE------------ 478
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
Y +I G C+ A L KEM ++ P
Sbjct: 479 -------------------------VIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNV 513
Query: 487 QTCRLILDEVKQKHMYDAAEKI 508
+ R +++ + ++ AE++
Sbjct: 514 ASYRYMIEVLCKERKSKEAERL 535
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 183/390 (46%), Gaps = 10/390 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAV 188
G+ S + ++ + +Q + E ++ + + +++ AG+ E +
Sbjct: 124 GFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSF 183
Query: 189 RTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGW 247
EL FG N L+D CK+G++E A+ +F E+ K + N T+ + I+G
Sbjct: 184 DLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGL 243
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
K + ++M+ G P + +Y+ ++ C+ +++ DEM+ +G N+
Sbjct: 244 FKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNI 303
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
VTY T++ L + EA ++ ++MK G P+ +N LI ++ +A+ + +
Sbjct: 304 VTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCR- 362
Query: 368 EMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKT 427
++ G++P T+N +++ F G A +++EM + KP+ T+ L+ + ++
Sbjct: 363 DLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEE-RGIKPSKVTYTILIDTFARS 421
Query: 428 GKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR-- 485
++ + L + + L D+ TY+++IHG C + A LFK M+ + P
Sbjct: 422 DNMEKAIQLRLS--MEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEV 479
Query: 486 -YQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
Y T +IL K+ Y A + ++ + +K
Sbjct: 480 IYNT--MILGYCKEGSSYRALKLLKEMEEK 507
Score = 122 bits (306), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 155/329 (47%), Gaps = 4/329 (1%)
Query: 187 AVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIFIHG 246
++ F+E+ G + N LL + S F E KS + + ++F I I G
Sbjct: 113 SISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKG 172
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C+ ++++ + E+ G P V+ Y+T+I C++ K +L EM G N
Sbjct: 173 CCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVAN 232
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
TYT +++ L K+G ++ + EKM+ G P+ +NC++ L + R ++A V+
Sbjct: 233 ERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFD 292
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
EM E GV+ + T+NT+I +A V+++M K + PN+ T++ L+
Sbjct: 293 -EMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM-KSDGINPNLITYNTLIDGFCG 350
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
GK + LS D + LS + TY +++ G CR A + KEM I P
Sbjct: 351 VGKLGKALSLCRD--LKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSK 408
Query: 487 QTCRLILDEVKQKHMYDAAEKIEAVMKKL 515
T +++D + + A ++ M++L
Sbjct: 409 VTYTILIDTFARSDNMEKAIQLRLSMEEL 437
Score = 89.7 bits (221), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 105/208 (50%), Gaps = 2/208 (0%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y ++D V ++ + +L ++ S+G +L T ++ F G A + E+
Sbjct: 341 YNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEME 400
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVD 254
G++ + T +L+DT + +E A + L ++ + P+ HT+++ IHG+C +++
Sbjct: 401 ERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMN 460
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA + M C P + Y+T+I YC++ + + +LL EM+ + PNV +Y ++
Sbjct: 461 EASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMI 520
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDS 342
L K +EA R+ EKM G P +
Sbjct: 521 EVLCKERKSKEAERLVEKMIDSGIDPST 548
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 104/254 (40%), Gaps = 38/254 (14%)
Query: 275 YSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKS-------------- 320
Y II SY + + + +EM G P + +++++ S
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 321 --------------------GDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
G+ E++ + ++ G P+ + LI + +++
Sbjct: 157 SKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEK 216
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
A ++ EM + G+ + T+ +I +G ++ F + E+M + + PN+ T++ +
Sbjct: 217 AKDLF-FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQE-DGVFPNLYTYNCV 274
Query: 421 LKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGH 480
+ K G+T + Q+ D+M + +S +I TY +I GLCR K A + +M
Sbjct: 275 MNQLCKDGRTKDAF-QVFDEM-RERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSD 332
Query: 481 DITPRYQTCRLILD 494
I P T ++D
Sbjct: 333 GINPNLITYNTLID 346
>sp|Q8GYP6|PPR49_ARATH Pentatricopeptide repeat-containing protein At1g18900
OS=Arabidopsis thaliana GN=At1g18900 PE=1 SV=1
Length = 860
Score = 139 bits (349), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 178/364 (48%), Gaps = 18/364 (4%)
Query: 66 DIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRWAG 125
++ ++ + G + +E Q+L ++ Y N+++ + +D+ +ALG F W
Sbjct: 304 NVSSVLRRFRWGPAAEEALQNL-------GLRIDAYQANQVLKQM-NDYGNALGFFYWLK 355
Query: 126 SCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKG----HIVTLNTIAKVMRRFSGA 181
PG++H Y MV LG+ +Q + LL+EM + + VT N +++ + A
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYN---RLIHSYGRA 412
Query: 182 GQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTF 240
+A+ F+++ G + + T L+D K G +++A ++ +++ + P+ T+
Sbjct: 413 NYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTY 472
Query: 241 NIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQA 300
++ I+ K + A EM GC P +++Y+ ++ + + N+ +L +MQ
Sbjct: 473 SVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQN 532
Query: 301 QGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQE 360
G P+ VTY+ VM L G EEA + +M+ PD + L+ G+A V++
Sbjct: 533 AGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEK 592
Query: 361 AVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPL 420
A YQ M G+ P+ T N++++ F +A+ +L+ M L +P++QT+ L
Sbjct: 593 AWQWYQA-MLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLAL-GLRPSLQTYTLL 650
Query: 421 LKSC 424
L C
Sbjct: 651 LSCC 654
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 154/333 (46%), Gaps = 13/333 (3%)
Query: 161 SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVE 220
+ GHIV ++ V+RRF +W A + L GL + N +L + G
Sbjct: 297 NSGHIV--ENVSSVLRRF----RWGPAAE--EALQNLGLRIDAYQANQVLKQMNDYGNA- 347
Query: 221 LARSVFLELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQ 280
L +L+ + + HT+ + + + + EM GC P ++Y+ +I
Sbjct: 348 LGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIH 407
Query: 281 SYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKP 340
SY R ++ + ++MQ GC P+ VTY T++ AK+G + A+ + ++M+ G P
Sbjct: 408 SYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSP 467
Query: 341 DSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHV 400
D+ ++ +I LG+A + A ++ EM + G P+ T+N M+ + + +++ A +
Sbjct: 468 DTFTYSVIINCLGKAGHLPAAHKLF-CEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKL 526
Query: 401 LEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHG 460
+M +P+ T+ +++ G +E + +M K+ + D Y L++
Sbjct: 527 YRDMQNAGF-EPDKVTYSIVMEVLGHCGYLEEA-EAVFTEMQQKNWIP-DEPVYGLLVDL 583
Query: 461 LCRANKCEWAYLLFKEMIGHDITPRYQTCRLIL 493
+A E A+ ++ M+ + P TC +L
Sbjct: 584 WGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLL 616
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 81/175 (46%), Gaps = 10/175 (5%)
Query: 337 GSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEK 396
G K D + ++ LGRA + A+ EM +G P+T T+N +I + + +
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFG-AINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNE 417
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHH---LSLDITT 453
A +V +M + CKP+ T+ L+ K G D + DM + LS D T
Sbjct: 418 AMNVFNQMQE-AGCKPDRVTYCTLIDIHAKAGFLDIAM-----DMYQRMQAGGLSPDTFT 471
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
Y+++I+ L +A A+ LF EM+ TP T +++D + Y A K+
Sbjct: 472 YSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKL 526
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 138 bits (348), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 180/369 (48%), Gaps = 8/369 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
G H+ Y +M++ L + Q+ A+L +M K G+ ++ T+ ++ F + +A
Sbjct: 95 GVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 154
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIH 245
V D++ G + +T T L+ L + K A ++ + +K C P+ T+ I+
Sbjct: 155 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGC-QPDLVTYGAVIN 213
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G CK D A + +M+ V+ YST+I S C+ + L EM +G P
Sbjct: 214 GLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRP 273
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
+V TY++++S L G + +A R+ M P+ FN LI + ++ EA ++
Sbjct: 274 DVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLF 333
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCF 425
EM + + P+ T+N++I F H ++A + M + C P+V T++ L+
Sbjct: 334 D-EMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVS-KDCLPDVVTYNTLINGFC 391
Query: 426 KTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPR 485
K K + + +L DM ++ L + TYT +IHG +A+ C+ A ++FK+M+ + P
Sbjct: 392 KAKKVVDGM-ELFRDM-SRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPN 449
Query: 486 YQTCRLILD 494
T +LD
Sbjct: 450 IMTYNTLLD 458
Score = 136 bits (343), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 190/369 (51%), Gaps = 20/369 (5%)
Query: 141 VDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDE-LGTFGL 199
VD+ G++ + +++E SK L+ IAK M++F D V +F E + G+
Sbjct: 50 VDLFGEMVKSRPFPSIVE-FSK----LLSAIAK-MKKF-------DLVISFGEKMEILGV 96
Query: 200 EKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQW 258
N T N++++ LC+ ++ A ++ ++ K P+ T N ++G+C NR+ EA
Sbjct: 97 SHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVA 156
Query: 259 TIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLA 318
+ +M G P ++++T++ + S+ L++ M +GC P++VTY V++ L
Sbjct: 157 LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLC 216
Query: 319 KSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDT 378
K G+ + A+ + KM+ + D ++ +I +L + V +A+ ++ EM G+ PD
Sbjct: 217 KRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLF-TEMDNKGIRPDV 275
Query: 379 STFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLL 438
T++++I+ ++G A +L +M + PNV TF+ L+ + K GK E +L
Sbjct: 276 FTYSSLISCLCNYGRWSDASRLLSDMLE-RKINPNVVTFNSLIDAFAKEGKLIEA-EKLF 333
Query: 439 DDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEV-K 497
D+M+ + + +I TY +I+G C ++ + A +F M+ D P T +++ K
Sbjct: 334 DEMIQR-SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCK 392
Query: 498 QKHMYDAAE 506
K + D E
Sbjct: 393 AKKVVDGME 401
Score = 132 bits (333), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 167/359 (46%), Gaps = 41/359 (11%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
IY ++D L K R +D L EM +KG + T + ++ G+W DA R ++
Sbjct: 242 IYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 301
Query: 195 GTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRV 253
+ N T N L+D KEGK+ A +F E+ + I PN T+N I+G+C +R+
Sbjct: 302 LERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL 361
Query: 254 DEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEM--------------- 298
DEAQ M C P V++Y+T+I +C+ EL +M
Sbjct: 362 DEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTL 421
Query: 299 -----QAQGCP---------------PNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGS 338
QA C PN++TY T++ L K+G E+A+ + E ++
Sbjct: 422 IHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKM 481
Query: 339 KPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
+PD +N + + +A +V++ ++ + GV PD +NTMI+ F G E+A+
Sbjct: 482 EPDIYTYNIMSEGMCKAGKVEDGWDLF-CSLSLKGVKPDVIAYNTMISGFCKKGLKEEAY 540
Query: 399 HVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLV 457
+ +M K + P+ T++ L+++ + G D+ S L + + D +TY LV
Sbjct: 541 TLFIKM-KEDGPLPDSGTYNTLIRAHLRDG--DKAASAELIKEMRSCRFAGDASTYGLV 596
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 174/358 (48%), Gaps = 6/358 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMS-KGHIVTLNTIAKVMRRFSGAGQWEDA 187
GY+ + + +V L + + + AL+E M KG L T V+ G+ + A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHG 246
+ +++ +E + + ++D+LCK V+ A ++F E+ + I P+ T++ I
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C R +A + +M +P V++++++I ++ ++ + +L DEM + PN
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
+VTY ++++ +EA +I M PD +N LI +A +V + + +++
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFR 404
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
+M G+ +T T+ T+I F + A V ++M + PN+ T++ LL K
Sbjct: 405 -DMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVS-DGVHPNIMTYNTLLDGLCK 462
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
GK ++ + ++ + + K + DI TY ++ G+C+A K E + LF + + P
Sbjct: 463 NGKLEKAM--VVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKP 518
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 143/308 (46%), Gaps = 15/308 (4%)
Query: 38 SSPIESYCSDGARLDHHQVLC--VDSPRLPDIDVIISKVHVGSSEDEVFQSLK--QDHVC 93
SS I C+ G D ++L ++ P++ S + + E ++ ++ K + +
Sbjct: 279 SSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ 338
Query: 94 NAIQPSHYLVNKLIHRF--KDDWKSALGIFRWAGSCPGYEHSSEIYEMMVDILGKVRQMD 151
+I P+ N LI+ F D A IF S Y +++ K +++
Sbjct: 339 RSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVT-YNTLINGFCKAKKVV 397
Query: 152 QMRALLEEMSK----GHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMN 207
L +MS+ G+ VT T+ + F A ++A F ++ + G+ N T N
Sbjct: 398 DGMELFRDMSRRGLVGNTVTYTTL---IHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYN 454
Query: 208 LLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGH 266
LLD LCK GK+E A VF L KS + P+ +T+NI G CK +V++ +
Sbjct: 455 TLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLK 514
Query: 267 GCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEA 326
G P VI+Y+T+I +C++ + Y L +M+ G P+ TY T++ + GD +
Sbjct: 515 GVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAAS 574
Query: 327 IRITEKMK 334
+ ++M+
Sbjct: 575 AELIKEMR 582
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 135/292 (46%), Gaps = 5/292 (1%)
Query: 218 KVELARSVFLELKSCIP-PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYS 276
K++ A +F E+ P P+ F+ + K+ + D ++M+ G + +Y+
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 277 TIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIV 336
+I CR+ S +L +M G P++VT ++++ EA+ + ++M +
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 337 GSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEK 396
G +PD+ F L++ L + ++ EAV + + M G PD T+ +I G +
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVE-RMVVKGCQPDLVTYGAVINGLCKRGEPDL 223
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTL 456
A ++L +M K + +V + ++ S K D+ L+ L +M NK + D+ TY+
Sbjct: 224 ALNLLNKMEK-GKIEADVVIYSTVIDSLCKYRHVDDALN-LFTEMDNKG-IRPDVFTYSS 280
Query: 457 VIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKI 508
+I LC + A L +M+ I P T ++D ++ AEK+
Sbjct: 281 LISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKL 332
Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 6/156 (3%)
Query: 164 HIVTLNTIAKVMRRFSGAGQWEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELAR 223
+I+T NT+ + G+ E A+ F+ L +E + T N++ + +CK GKVE
Sbjct: 449 NIMTYNTL---LDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGW 505
Query: 224 SVF--LELKSCIPPNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQS 281
+F L LK + P+ +N I G+CK +EA +MK G P +Y+T+I++
Sbjct: 506 DLFCSLSLKG-VKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRA 564
Query: 282 YCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYL 317
+ R + + EL+ EM++ + TY V L
Sbjct: 565 HLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 600
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 93/222 (41%), Gaps = 39/222 (17%)
Query: 293 ELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTL 352
+L EM P++V ++ ++S +AK F+ I EKM+I+G + +N +I L
Sbjct: 51 DLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCL 110
Query: 353 GRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKP 412
R S++ A+ + +M + G P T N+++ F H +A ++++M ++
Sbjct: 111 CRRSQLSFALAILG-KMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM----- 164
Query: 413 NVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYL 472
+ P D T+T ++HGL + NK A
Sbjct: 165 ---GYQP------------------------------DTVTFTTLVHGLFQHNKASEAVA 191
Query: 473 LFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
L + M+ P T +++ + ++ D A + M+K
Sbjct: 192 LVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEK 233
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 138 bits (348), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 171/360 (47%), Gaps = 5/360 (1%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEMSKGHIV-TLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
+ ++ + K+ + D + +L E+M I L T + + F Q A+ ++
Sbjct: 78 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMM 137
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGWCKINRVD 254
G + T+N LL+ C ++ A ++ ++ + P+ TF +HG + N+
Sbjct: 138 KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS 197
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
EA ++ M GC P +++Y +I C++ LL++M+ +VV Y T++
Sbjct: 198 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTII 257
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGV 374
L K ++A + KM+ G KPD +N LI L R +A + +M E +
Sbjct: 258 DGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLS-DMLEKNI 316
Query: 375 APDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECL 434
PD FN +I F G +A + +EM K +HC P+V ++ L+K K + +E +
Sbjct: 317 NPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGM 376
Query: 435 SQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILD 494
+ +++ L + TYT +IHG +A C+ A ++FK+M+ + P T ++LD
Sbjct: 377 EVFRE--MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLD 434
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/423 (23%), Positives = 181/423 (42%), Gaps = 40/423 (9%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
G H+ Y + ++ + Q+ A+L +M K G+ ++ T+ ++ F + +A
Sbjct: 105 GISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 164
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVF--LELKSCIPPNAHTFNIFIH 245
V D++ G + +T T L+ L + K A ++ + +K C P+ T+ I+
Sbjct: 165 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGC-QPDLVTYGAVIN 223
Query: 246 GWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPP 305
G CK D A + +M+ V+ Y+TII C+ + ++L ++M+ +G P
Sbjct: 224 GLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKP 283
Query: 306 NVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVY 365
+V TY ++S L G + +A R+ M PD FFN LI + ++ EA +Y
Sbjct: 284 DVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLY 343
Query: 366 QVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKL------------------ 407
+ PD +NT+I F + E+ V EM++
Sbjct: 344 DEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQ 403
Query: 408 ----------------EHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHHLSLDI 451
+ P++ T++ LL G + L ++ + + K + LDI
Sbjct: 404 ARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETAL--VVFEYMQKRDMKLDI 461
Query: 452 TTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAV 511
TYT +I LC+A K E + LF + + P T ++ +K + + A+ +
Sbjct: 462 VTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVE 521
Query: 512 MKK 514
MK+
Sbjct: 522 MKE 524
Score = 105 bits (263), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 136/312 (43%), Gaps = 49/312 (15%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDEL 194
IY ++D L K + MD L +M +KG + T ++ G+W DA R ++
Sbjct: 252 IYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDM 311
Query: 195 GTFGLEKNTET----MNLLLDTLCKEGKVELARSVFLEL---KSCIPPNAHTFNIFIHGW 247
LEKN N L+D KEGK+ A ++ E+ K C P + +N I G+
Sbjct: 312 ----LEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP-DVVAYNTLIKGF 366
Query: 248 CKINRVDE-----------------------------------AQWTIQEMKGHGCHPCV 272
CK RV+E AQ ++M G HP +
Sbjct: 367 CKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDI 426
Query: 273 ISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEK 332
++Y+ ++ C N + + MQ + ++VTYTT++ L K+G E+ +
Sbjct: 427 MTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCS 486
Query: 333 MKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHG 392
+ + G KP+ + ++ R +EA ++ VEM E+G P++ T+NT+I G
Sbjct: 487 LSLKGVKPNVVTYTTMMSGFCRKGLKEEADALF-VEMKEDGPLPNSGTYNTLIRARLRDG 545
Query: 393 HHEKAFHVLEEM 404
+ +++EM
Sbjct: 546 DEAASAELIKEM 557
Score = 99.4 bits (246), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 126/270 (46%), Gaps = 13/270 (4%)
Query: 136 IYEMMVDILGKVRQMDQMRALLEEMSKGH-----IVTLNTIAKVMRRFSGAGQWEDAVRT 190
+ ++D K ++ + L +EM K +V NT+ K ++ + E+ +
Sbjct: 322 FFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYK---RVEEGMEV 378
Query: 191 FDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKS-CIPPNAHTFNIFIHGWCK 249
F E+ GL NT T L+ + + A+ VF ++ S + P+ T+NI + G C
Sbjct: 379 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCN 438
Query: 250 INRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVT 309
V+ A + M+ +++Y+T+I++ C+ ++L + +G PNVVT
Sbjct: 439 NGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVT 498
Query: 310 YTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV-E 368
YTT+MS + G EEA + +MK G P+S +N LI R EA + E
Sbjct: 499 YTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRA--RLRDGDEAASAELIKE 556
Query: 369 MPENGVAPDTSTFNTMITMFSHHGHHEKAF 398
M G A D STF + M H G +K+F
Sbjct: 557 MRSCGFAGDASTFGLVTNML-HDGRLDKSF 585
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 134/301 (44%), Gaps = 11/301 (3%)
Query: 218 KVELARSVFLELKSCIP-PNAHTFNIFIHGWCKINRVDEAQWTIQEMKGHGCHPCVISYS 276
K++ A +F ++ P P+ F+ + K+N+ D ++M+ G + +YS
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 277 TIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIV 336
I +CR+ S +L +M G P++VT ++++ EA+ + ++M +
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 337 GSKPDSRFFNCLIYTLGRASRVQEAVYVYQVEMPENGVAPDTSTFNTMITMFSHHGHHEK 396
G +PD+ F L++ L + ++ EAV + + M G PD T+ +I G +
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVE-RMVVKGCQPDLVTYGAVINGLCKRGEPDL 233
Query: 397 AFHVLEEMNKLEHCKPNVQTFHPLLKSCFKTGKTDECLSQLLDDMVNKHH---LSLDITT 453
A ++L +M K + +V ++ ++ K D+ D+ NK + D+ T
Sbjct: 234 ALNLLNKMEK-GKIEADVVIYNTIIDGLCKYKHMDDAF-----DLFNKMETKGIKPDVFT 287
Query: 454 YTLVIHGLCRANKCEWAYLLFKEMIGHDITPRYQTCRLILDEVKQKHMYDAAEKIEAVMK 513
Y +I LC + A L +M+ +I P ++D ++ AEK+ M
Sbjct: 288 YNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMV 347
Query: 514 K 514
K
Sbjct: 348 K 348
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 137 bits (346), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 186/390 (47%), Gaps = 11/390 (2%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQWEDAV 188
Y + S+ EM+ + + ++ D + + + ++ ++++ S +++ +
Sbjct: 42 AYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVI 101
Query: 189 RTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHGW 247
++++ G+ N T N+LL+ C+ ++ LA S ++ K P+ TF ++G+
Sbjct: 102 YLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGF 161
Query: 248 CKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNV 307
C+ +RV +A + +M G G P V+ Y+TII C+ +LL+ M+ G P+V
Sbjct: 162 CRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDV 221
Query: 308 VTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQV 367
VTY +++S L SG + +A R+ M PD FN LI + RV EA Y+
Sbjct: 222 VTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYE- 280
Query: 368 EMPENGVAPDTSTFNTMI---TMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSC 424
EM + PD T++ +I M+S E+ F + + C P+V T+ L+
Sbjct: 281 EMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVS----KGCFPDVVTYSILINGY 336
Query: 425 FKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITP 484
K+ K + + + +++ + + TYT++I G CRA K A +F+ M+ + P
Sbjct: 337 CKSKKVEHGMKLFCE--MSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHP 394
Query: 485 RYQTCRLILDEVKQKHMYDAAEKIEAVMKK 514
T ++L + + A I A M+K
Sbjct: 395 NIITYNVLLHGLCDNGKIEKALVILADMQK 424
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 158/361 (43%), Gaps = 47/361 (13%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHI----VTLNTIAKVMRRFSGAGQW 184
GY+ + IY ++D L K +Q+D LL M K I VT N++ + +G+W
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSL---ISGLCSSGRW 237
Query: 185 EDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIF 243
DA R + + + T N L+D KEG+V A + E+ + + P+ T+++
Sbjct: 238 SDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLL 297
Query: 244 IHGWCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGC 303
I+G C +R+DEA+ M GC P V++YS +I YC+ +L EM +G
Sbjct: 298 IYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGV 357
Query: 304 PPNVVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVY 363
N VTYT ++ ++G A I +M G P+ +N L++ L ++++A+
Sbjct: 358 VRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKAL- 416
Query: 364 VYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 423
V +M +NG+ D T+N +I G A+ + +C N Q P
Sbjct: 417 VILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDI--------YCSLNCQGLMP---- 464
Query: 424 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 483
DI TYT ++ GL + A LF++M I
Sbjct: 465 --------------------------DIWTYTTMMLGLYKKGLRREADALFRKMKEDGIL 498
Query: 484 P 484
P
Sbjct: 499 P 499
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 178/388 (45%), Gaps = 6/388 (1%)
Query: 129 GYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSK-GHIVTLNTIAKVMRRFSGAGQWEDA 187
G H+ ++++ + Q+ + L +M K GH ++ T ++ F + DA
Sbjct: 111 GIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDA 170
Query: 188 VRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLEL-KSCIPPNAHTFNIFIHG 246
+ FD++ G + N N ++D LCK +V+ A + + K I P+ T+N I G
Sbjct: 171 LYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISG 230
Query: 247 WCKINRVDEAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPN 306
C R +A + M +P V +++ +I + ++ S+ E +EM + P+
Sbjct: 231 LCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPD 290
Query: 307 VVTYTTVMSYLAKSGDFEEAIRITEKMKIVGSKPDSRFFNCLIYTLGRASRVQEAVYVYQ 366
+VTY+ ++ L +EA + M G PD ++ LI ++ +V+ + ++
Sbjct: 291 IVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLF- 349
Query: 367 VEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKSCFK 426
EM + GV +T T+ +I + G A + M PN+ T++ LL
Sbjct: 350 CEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRM-VFCGVHPNIITYNVLLHGLCD 408
Query: 427 TGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDITPRY 486
GK ++ L L D + K+ + DI TY ++I G+C+A + A+ ++ + + P
Sbjct: 409 NGKIEKALVILAD--MQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDI 466
Query: 487 QTCRLILDEVKQKHMYDAAEKIEAVMKK 514
T ++ + +K + A+ + MK+
Sbjct: 467 WTYTTMMLGLYKKGLRREADALFRKMKE 494
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 108/207 (52%), Gaps = 2/207 (0%)
Query: 137 YEMMVDILGKVRQMDQMRALLEEM-SKGHIVTLNTIAKVMRRFSGAGQWEDAVRTFDELG 195
Y +++ L ++D+ + M SKG + T + ++ + + + E ++ F E+
Sbjct: 294 YSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMS 353
Query: 196 TFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSC-IPPNAHTFNIFIHGWCKINRVD 254
G+ +NT T +L+ C+ GK+ +A +F + C + PN T+N+ +HG C +++
Sbjct: 354 QRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIE 413
Query: 255 EAQWTIQEMKGHGCHPCVISYSTIIQSYCRQYNFSKVYELLDEMQAQGCPPNVVTYTTVM 314
+A + +M+ +G +++Y+ II+ C+ + +++ + QG P++ TYTT+M
Sbjct: 414 KALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMM 473
Query: 315 SYLAKSGDFEEAIRITEKMKIVGSKPD 341
L K G EA + KMK G P+
Sbjct: 474 LGLYKKGLRREADALFRKMKEDGILPN 500
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.135 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 190,580,850
Number of Sequences: 539616
Number of extensions: 7790796
Number of successful extensions: 26032
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 384
Number of HSP's successfully gapped in prelim test: 111
Number of HSP's that attempted gapping in prelim test: 17795
Number of HSP's gapped (non-prelim): 2435
length of query: 515
length of database: 191,569,459
effective HSP length: 122
effective length of query: 393
effective length of database: 125,736,307
effective search space: 49414368651
effective search space used: 49414368651
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)