BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010203
(515 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q28EW0|TM87A_XENTR Transmembrane protein 87A OS=Xenopus tropicalis GN=tmem87a PE=2
SV=1
Length = 541
Score = 177 bits (448), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 97/280 (34%), Positives = 162/280 (57%), Gaps = 7/280 (2%)
Query: 199 KNPTGYLPGRMAPLMNFYGFMSLAFVILGLFWFSQYARFWREVLHLQNCITLVITLGMFE 258
K P G++ PLM FY M + +++L L WF A +W+++L +Q I VI LGM E
Sbjct: 197 KGPHGFISASDWPLMIFYMVMCIMYILLALLWFIWSACYWKDLLRIQFWIAAVIFLGMLE 256
Query: 259 MALWYFEYAEFNETGVRPMGITAWAVTFGTVKRTVARVIILMVAMGYGVVRPTLGGLTSK 318
A++Y EY + TGV G+ +A ++KRT+AR+++ +V++GYG+++P LG + +
Sbjct: 257 KAVYYAEYQNTDNTGVSSHGLLIFAELISSIKRTLARLLVTIVSLGYGIIKPRLGAVMHR 316
Query: 319 VIMLGGTFFLASEVLELVENVGAVS-DLSGKARLFLVLPVAILDAFFILWIFTSLSSTLN 377
V+ +G +F+ + V ++ +GA DL L +P+A+LD+ WIF SL+ T+
Sbjct: 317 VVGMGVLYFVFAAVEGVMRIIGAKEYDLV----LLAGIPLALLDSGLCWWIFVSLAQTMK 372
Query: 378 KLQARRMMTKLDIYRKFTNALAVAVIVSVGWICYEL-YFKSNDIYNEKWQNAWIIPAFWQ 436
L+ R+ K +YR FTN L A++ S+ ++ + F+ D W W+ A+W+
Sbjct: 373 TLKLRKNTVKYSLYRHFTNTLIFAILASIIFMIWRTKKFQLVDC-QADWMELWVDDAYWR 431
Query: 437 ILSFSLLCVICALWAPSQNSMRYAYSEDVNEEFDKDETSL 476
L F +L VI LW PS N+ RYA++ +++ D+ E L
Sbjct: 432 FLFFIILLVIMFLWRPSANNQRYAFTPLIDDSDDEVEEFL 471
>sp|Q8BKU8|TM87B_MOUSE Transmembrane protein 87B OS=Mus musculus GN=Tmem87b PE=2 SV=1
Length = 555
Score = 171 bits (433), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/283 (33%), Positives = 155/283 (54%), Gaps = 9/283 (3%)
Query: 201 PTGYLPGRMAPLMNFYGFMSLAFVILGLFWFSQYARFWREVLHLQNCITLVITLGMFEMA 260
P GY+ PLM FY M + +++ G+ W A +W+++L +Q I VI LGM E A
Sbjct: 206 PHGYISASDWPLMIFYMVMCIVYILYGVLWLLWSACYWKDILRIQFWIAAVIFLGMLEKA 265
Query: 261 LWYFEYAEFNETGVRPMGITAWAVTFGTVKRTVARVIILMVAMGYGVVRPTLGGLTSKVI 320
++Y EY N TG+ G+ +A VKRT+AR+++++V++GYG+V+P LG + +VI
Sbjct: 266 VFYSEYQNINSTGLSTQGLLIFAELISAVKRTLARLLVIIVSLGYGIVKPRLGTVMHRVI 325
Query: 321 MLGGTFFLASEVLELVENVGAVSDLSGKARLFLVLPVAILDAFFILWIFTSLSSTLNKLQ 380
LG + + + + ++ +G L A + + +A++D+ F+ +IF SL+ T+ L+
Sbjct: 326 GLGLLYLIFAAIEGVMRVIGGSKHL---AVVLTDIVLAVIDSIFVWFIFISLAQTMKTLR 382
Query: 381 ARRMMTKLDIYRKFTNALAVAVIVSVGWICYELYFKSNDIYNEKWQNAWIIPAFWQILSF 440
R+ K +YR FTN L AV+ S+ ++ + W W+ AFW L
Sbjct: 383 LRKNTVKFSLYRHFTNTLIFAVLASIVFMVWTTKTFRIAKCQSDWMELWVDDAFWSFLFS 442
Query: 441 SLLCVICALWAPSQNSMRYAY------SEDVNEEFDKDETSLT 477
+L VI LW PS N+ RYA+ S+D EEF +LT
Sbjct: 443 VILIVIMFLWRPSANNQRYAFMPLIDDSDDEVEEFMVTSENLT 485
>sp|Q96K49|TM87B_HUMAN Transmembrane protein 87B OS=Homo sapiens GN=TMEM87B PE=1 SV=1
Length = 555
Score = 168 bits (426), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 163/312 (52%), Gaps = 19/312 (6%)
Query: 201 PTGYLPGRMAPLMNFYGFMSLAFVILGLFWFSQYARFWREVLHLQNCITLVITLGMFEMA 260
P GY+ PLM FY M + +++ G+ W + A +W+++L +Q I VI LGM E A
Sbjct: 205 PHGYISASDWPLMIFYMVMCIVYILYGILWLTWSACYWKDILRIQFWIAAVIFLGMLEKA 264
Query: 261 LWYFEYAEFNETGVRPMGITAWAVTFGTVKRTVARVIILMVAMGYGVVRPTLGGLTSKVI 320
++Y EY + TG+ G+ +A +KRT+AR+++++V++GYG+V+P LG + +VI
Sbjct: 265 VFYSEYQNISNTGLSTQGLLIFAELISAIKRTLARLLVIIVSLGYGIVKPRLGTVMHRVI 324
Query: 321 MLGGTFFLASEVLELVENVGAVSDLSGKARLFLVLP---VAILDAFFILWIFTSLSSTLN 377
LG + + + V ++ +G G L +VL +A++D+ F+ +IF SL+ T+
Sbjct: 325 GLGLLYLIFAAVEGVMRVIG------GSNHLAVVLDDIILAVIDSIFVWFIFISLAQTMK 378
Query: 378 KLQARRMMTKLDIYRKFTNALAVAVIVSV---GWICYELYFKSNDIYNEKWQNAWIIPAF 434
L+ R+ K +YR F N L AV+ S+ GW W W+ AF
Sbjct: 379 TLRLRKNTVKFSLYRHFKNTLIFAVLASIVFMGWTTKTFRIAK---CQSDWMERWVDDAF 435
Query: 435 WQILSFSLLCVICALWAPSQNSMRYAYSEDVNEEFDKDE----TSLTLIKPSPMASKDVR 490
W L +L VI LW PS N+ RYA+ +++ D+ E TS L + + +
Sbjct: 436 WSFLFSLILIVIMFLWRPSANNQRYAFMPLIDDSDDEIEEFMVTSENLTEGIKLRASKSV 495
Query: 491 SVPEPRPVQSNN 502
S +P S N
Sbjct: 496 SNGTAKPATSEN 507
>sp|Q8BXN9|TM87A_MOUSE Transmembrane protein 87A OS=Mus musculus GN=Tmem87a PE=1 SV=1
Length = 555
Score = 166 bits (421), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 165/312 (52%), Gaps = 5/312 (1%)
Query: 199 KNPTGYLPGRMAPLMNFYGFMSLAFVILGLFWFSQYARFWREVLHLQNCITLVITLGMFE 258
K P YL PLM F+ M + +V+ G+ W + A +WR++L +Q I VI LGMFE
Sbjct: 213 KGPYEYLTLEDYPLMIFFMVMCIVYVLFGVLWLAWSACYWRDLLRIQFWIGAVIFLGMFE 272
Query: 259 MALWYFEYAEFNETGVRPMGITAWAVTFGTVKRTVARVIILMVAMGYGVVRPTLGGLTSK 318
A++Y E+ G A VKR++AR ++++V++GYG+V+P LG K
Sbjct: 273 KAVFYAEFQNIRYKGESVQNALVLAELLSAVKRSLARTLVIIVSLGYGIVKPRLGVTLHK 332
Query: 319 VIMLGGTFFLASEVLELVENVGAVSDLSGKARLFLVLPVAILDAFFILWIFTSLSSTLNK 378
V++ G + L S + ++ GA +DL+ A +P+A LD WIF SL+ T+
Sbjct: 333 VVVAGALYLLFSGMEGVLRVTGAQTDLASLA----FIPLAFLDTALCWWIFISLTQTMKL 388
Query: 379 LQARRMMTKLDIYRKFTNALAVAVIVSVGWICYELYFKSNDIYNEKWQNAWIIPAFWQIL 438
L+ RR + KL +YR FTN L +AV S+ +I + W+ W+ A W++L
Sbjct: 389 LKLRRNIVKLSLYRHFTNTLILAVAASIVFIIWTTMKFRIVTCQSDWRELWVDDAIWRLL 448
Query: 439 SFSLLCVICALWAPSQNSMRYAYSEDVNEEFDKDETSLTLIKPSPMASKDVRSVPEPRPV 498
+L VI LW PS N+ R+A+S ++EE ++DE ++K S K + EP
Sbjct: 449 FSMILFVIMILWRPSANNQRFAFS-PLSEEDEEDEQKEPMLKESFEGMKMRSTKQEPNGT 507
Query: 499 QSNNGALNGDLE 510
N A DL+
Sbjct: 508 SKVNKAQEDDLK 519
>sp|Q8NBN3|TM87A_HUMAN Transmembrane protein 87A OS=Homo sapiens GN=TMEM87A PE=1 SV=3
Length = 555
Score = 166 bits (419), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 165/312 (52%), Gaps = 5/312 (1%)
Query: 199 KNPTGYLPGRMAPLMNFYGFMSLAFVILGLFWFSQYARFWREVLHLQNCITLVITLGMFE 258
K P YL PLM F+ M + +V+ G+ W + A +WR++L +Q I VI LGM E
Sbjct: 213 KGPYEYLTLEDYPLMIFFMVMCIVYVLFGVLWLAWSACYWRDLLRIQFWIGAVIFLGMLE 272
Query: 259 MALWYFEYAEFNETGVRPMGITAWAVTFGTVKRTVARVIILMVAMGYGVVRPTLGGLTSK 318
A++Y E+ G G A VKR++AR ++++V++GYG+V+P LG K
Sbjct: 273 KAVFYAEFQNIRYKGESVQGALILAELLSAVKRSLARTLVIIVSLGYGIVKPRLGVTLHK 332
Query: 319 VIMLGGTFFLASEVLELVENVGAVSDLSGKARLFLVLPVAILDAFFILWIFTSLSSTLNK 378
V++ G + L S + ++ GA +DL+ A +P+A LD WIF SL+ T+
Sbjct: 333 VVVAGALYLLFSGMEGVLRVTGAQTDLASLA----FIPLAFLDTALCWWIFISLTQTMKL 388
Query: 379 LQARRMMTKLDIYRKFTNALAVAVIVSVGWICYELYFKSNDIYNEKWQNAWIIPAFWQIL 438
L+ RR + KL +YR FTN L +AV S+ +I + W+ W+ A W++L
Sbjct: 389 LKLRRNIVKLSLYRHFTNTLILAVAASIVFIIWTTMKFRIVTCQSDWRELWVDDAIWRLL 448
Query: 439 SFSLLCVICALWAPSQNSMRYAYSEDVNEEFDKDETSLTLIKPSPMASKDVRSVPEPRPV 498
+L VI LW PS N+ R+A+S ++EE ++DE ++K S K + EP
Sbjct: 449 FSMILFVIMVLWRPSANNQRFAFS-PLSEEEEEDEQKEPMLKESFEGMKMRSTKQEPNGN 507
Query: 499 QSNNGALNGDLE 510
N A DL+
Sbjct: 508 SKVNKAQEDDLK 519
>sp|O13989|YEG7_SCHPO Uncharacterized protein C26H5.07c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC26H5.07c PE=3 SV=2
Length = 505
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 107/470 (22%), Positives = 206/470 (43%), Gaps = 66/470 (14%)
Query: 74 RFEKITFRRSIDNSNFSSGLIQALVFEVEDRETIGGSAYGGQRAVCCTADLSKLGVCTQG 133
+ +IT + S+F G I+ L+F +D IG G++ C + + GVC
Sbjct: 48 KTSEITLKIDSYTSDFG-GAIRLLIFNWKDVNAIGMEDDDGEKHYICNYEDIEAGVCKDD 106
Query: 134 E----VIHRPSTKDPSWPQVFGIKFEVDEVEATLPSNSIQITKTGMYNLYFIHCDLNLKD 189
+ +I++ + D + + E+ + + ++G+Y ++
Sbjct: 107 DYGLYLINQTAPHDSIYSAAV-------DAESMVSPLKYPVEQSGLYCVF---------T 150
Query: 190 LVVEGKS-------IWKNPTGYLPGRMAPLMNFYGFMSLAFVILGLFWFSQYARFWREVL 242
+EG S W+N G L P + + ++G++W R+ ++L
Sbjct: 151 APLEGSSEAYKITVTWENYFGNLDATDYPHLFLNPILLAINCLIGIWWSFIMFRYRHDLL 210
Query: 243 HLQNCITLVITLG----MFEMALWYFEYAEFNETGVRPMGITAWAVTFG-TVKRTVARVI 297
+Q I+ V+ L M +YF ++ TG + + A+ ++ + +++ +
Sbjct: 211 QVQKYISGVVALSIVCTMVSTGYFYFANSKGYTTGSK---VFAFFLSLAQSARQSYFGFL 267
Query: 298 ILMVAMGYGVVRPTLGGLTSKVIMLGGTFFLASEVLELVENVGAVSDL----SGKARLFL 353
+L+V++GY +V P+LG L K +L G L+ V + +S L S K L +
Sbjct: 268 LLIVSLGYSIVVPSLGSLLRKCQILAG--------LQFVSSCFFLSSLFISPSNKESLVI 319
Query: 354 VL--PVAILDAF-FILWIFTSLSSTLNKLQARRMMTKLDIYRKF-----TNALAVAVIVS 405
+ PV ++ F LWI +L++T+ L+ R+ K +Y + +A A IV+
Sbjct: 320 LFAAPVFLITLFAMFLWIVLALNNTIRDLRIRKQTVKAQMYTRLWIVICFGIVAYASIVA 379
Query: 406 VGWICYELYFKSNDIYNEKWQNAWIIP-AFWQILSFSLLCVICALWAPSQNSMRYAYSED 464
I +Y + N Y + W+ W + + IL L+ I LW P++N+ R+A SE
Sbjct: 380 ANAILIGIYGQMN-YYLKYWKLLWFLNYGYTDILVLILMLTILYLWRPTENNRRFAMSEQ 438
Query: 465 VNEEFDKDETSLTLIKPSPMASKDVRSVPEPRPVQ-SNNGALNGDLEEDK 513
V ++ D+ E + +L S D + RP +N ++G +E +
Sbjct: 439 VAQDVDEFEMTSSL-------SNDSLHLHHERPTSPANPHIIHGSADEHQ 481
>sp|A6ZZS6|PTM1_YEAS7 Membrane protein PTM1 OS=Saccharomyces cerevisiae (strain YJM789)
GN=PTM1 PE=3 SV=1
Length = 523
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 97/423 (22%), Positives = 184/423 (43%), Gaps = 47/423 (11%)
Query: 70 DSYIRFEKITFRRSIDNSNFSSGLIQALVFEVEDRETIGGSAYGGQRAVCCTADLSKLGV 129
D +I F D S+ GL+ A +++ +D E +G + C +G+
Sbjct: 53 DPFISFNLKKISGLSDESD--PGLVVA-IYDFQDFEHLGVQLPDEEMYYICDDYAIDIGI 109
Query: 130 CTQ--------GEVIHRPSTKDPSWPQVFGIKFEVDEVEATLPSNSIQITKTGMYNLYFI 181
C + +V++ P T + F +EV L I +TG Y +
Sbjct: 110 CEEENRDEFIVQDVVYDPYTSTNRSLANPIMTFSQNEV--GLHDTRYPIKETGFYCVTAF 167
Query: 182 HCDLNLK-DLVVEGKSIWKNPTGYLPGRMAPLMNFYGFMSLAFVI-LGLFWFSQYARFWR 239
+ K + VV ++N G L G + YG +++A+V+ + L+ F+ FW+
Sbjct: 168 RSSTSTKFNAVVN----FRNAYGQLAGTEINKLPLYGLLAVAYVVAMALYSFA----FWK 219
Query: 240 ---EVLHLQNCITLVITLGMFEMALWYFEYAEFNETGVRPMGITAWAVTFGTV---KRTV 293
E+L LQ + E + Y NE G GI + V + K T
Sbjct: 220 HKHELLPLQKYLLAFFVFLTAETIFVWAYYDLKNEKG-DTAGIKVYMVFLSILTAGKVTF 278
Query: 294 ARVIILMVAMGYGVVRPTLGGLTSKVIMLGGTFFLASEVLELVENVGAVSDLSGKARLFL 353
+ ++L++A+GYG+V P L + + G A + L+++ ++D+ + L L
Sbjct: 279 SFFLLLIIALGYGIVYPKLNKTLMRRCQMYGALTYAICIGFLIQSY--LTDMEAPSPLIL 336
Query: 354 V--LPVAILDAFFILWIFTSLSSTLNKLQARRMMTKLDIYRK--------FTNALAVAVI 403
+ +P+A+ F I S++ T+ L+ +R + KL++Y+K F + LA +++
Sbjct: 337 ITLIPMALALIIFYYMIIRSMTKTVIYLKEQRQIVKLNMYKKLLYIIYASFLSVLAGSIV 396
Query: 404 VSVGWICYELYFKSNDIYNEKWQNAWIIPAFWQILSFSLLCVICA-LWAPSQNSMRYAYS 462
S ++ + D+ + W++ + + FW L + ++ V A LW P+ S A S
Sbjct: 397 SSFIYVG----MNTIDMIEKNWRSRFFVTDFWPTLVYFIVFVTIAFLWRPTDTSYMLAAS 452
Query: 463 EDV 465
+ +
Sbjct: 453 QQL 455
>sp|P32857|PTM1_YEAST Membrane protein PTM1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PTM1 PE=1 SV=2
Length = 523
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 97/423 (22%), Positives = 184/423 (43%), Gaps = 47/423 (11%)
Query: 70 DSYIRFEKITFRRSIDNSNFSSGLIQALVFEVEDRETIGGSAYGGQRAVCCTADLSKLGV 129
D +I F D S+ GL+ A +++ +D E +G + C +G+
Sbjct: 53 DPFISFNLKKISGLSDESD--PGLVVA-IYDFQDFEHLGVQLPDEEMYYICDDYAIDIGI 109
Query: 130 CTQ--------GEVIHRPSTKDPSWPQVFGIKFEVDEVEATLPSNSIQITKTGMYNLYFI 181
C + +V++ P T + F +EV L I +TG Y +
Sbjct: 110 CEEENRDEFIVQDVVYDPYTSTNRSLANPIMTFSQNEV--GLHDTRYPIKETGFYCVTAF 167
Query: 182 HCDLNLK-DLVVEGKSIWKNPTGYLPGRMAPLMNFYGFMSLAFVI-LGLFWFSQYARFWR 239
+ K + VV ++N G L G + YG +++A+V+ + L+ F+ FW+
Sbjct: 168 RSSTSTKFNAVVN----FRNAYGQLAGTEINKLPLYGLLAVAYVVAMALYSFA----FWK 219
Query: 240 ---EVLHLQNCITLVITLGMFEMALWYFEYAEFNETGVRPMGITAWAVTFGTV---KRTV 293
E+L LQ + E + Y NE G GI + V + K T
Sbjct: 220 HKHELLPLQKYLLAFFVFLTAETIFVWAYYDLKNEKG-DTAGIKVYMVFLSILTAGKVTF 278
Query: 294 ARVIILMVAMGYGVVRPTLGGLTSKVIMLGGTFFLASEVLELVENVGAVSDLSGKARLFL 353
+ ++L++A+GYG+V P L + + G A + L+++ ++D+ + L L
Sbjct: 279 SFFLLLIIALGYGIVYPKLNKTLMRRCQMYGALTYAICIGFLIQSY--LTDMEAPSPLIL 336
Query: 354 V--LPVAILDAFFILWIFTSLSSTLNKLQARRMMTKLDIYRK--------FTNALAVAVI 403
+ +P+A+ F I S++ T+ L+ +R + KL++Y+K F + LA +++
Sbjct: 337 ITLIPMALALIIFYYMIIRSMTKTVIYLKEQRQIVKLNMYKKLLYIIYASFLSVLAGSIV 396
Query: 404 VSVGWICYELYFKSNDIYNEKWQNAWIIPAFWQILSFSLLCVICA-LWAPSQNSMRYAYS 462
S ++ + D+ + W++ + + FW L + ++ V A LW P+ S A S
Sbjct: 397 SSFIYVG----MNTIDMIEKNWRSRFFVTDFWPTLVYFIVFVTIAFLWRPTDTSYMLAAS 452
Query: 463 EDV 465
+ +
Sbjct: 453 QQL 455
>sp|P38745|YHB7_YEAST Uncharacterized membrane protein YHL071W OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YHL017W PE=1
SV=1
Length = 532
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 111/497 (22%), Positives = 203/497 (40%), Gaps = 37/497 (7%)
Query: 44 VVHAGSEGIYSSFSDA----HVNETAANNGDSYIRF--EKITFRRSIDNSNFSSGLIQAL 97
VV E I + D + E D YI F E+++ D+ G +
Sbjct: 17 VVQGNQESINQKYHDVCSGMYSKEDFNGKVDPYISFTLEELSLADEDDDG---EG-VSVA 72
Query: 98 VFEVEDRETIGGSAYGGQRAVCCTADLSKLGVC---TQGEVIHRPSTKDPSWPQVFGIKF 154
VF+ +D E IG G+ C LG+C ++G+ I + + DP + +
Sbjct: 73 VFDFQDYEHIGVRLPNGEIQYICDDYALDLGLCEDSSEGQFIIQETAIDPFTSKEHKLTS 132
Query: 155 EV---DEVEATLPSNSIQITKTGMYNLYFIHCDLNLKDLVVEGKSIWKNPTGYLPGRMAP 211
++ + E I KTG Y + + ++N G L A
Sbjct: 133 QILTFTQQELGTNDKVYSINKTGYYCV--TTSSFISSSSKFKATVNFRNAYGQLDASEAY 190
Query: 212 LMNFYGFMSLAFVILGLFWFSQYARFWREVLHLQNCI-TLVITLGMFEMALWYFEYAEFN 270
M Y F+++A+ + L + + E+L LQ I I L + +W + E N
Sbjct: 191 KMPIYAFLAVAYAVCTLVYSWLCWKHRHELLPLQRYILVFCIFLTADTIFVWMYYIIE-N 249
Query: 271 ETGVRPMGITAWAV---TFGTVKRTVARVIILMVAMGYGVVRPTLGGLTSKVIMLGGTFF 327
+ G + + + V F K T ++ L++++GYG+V P L + + F
Sbjct: 250 QKGNSSVALHVYMVFISIFSAGKMTFTLLLALLISLGYGIVYPKLDRTLLRRCQIFAIFT 309
Query: 328 LASEVLELVENVGAVSDLSGKARLFLVLPVAI-LDAFFILWIFTSLSSTLNKLQARRMMT 386
A V LV+ S+ L +P+ + L AF+ L + +S++ T+ L+ + +
Sbjct: 310 FAVCVAFLVQKYSQNSESLSNLILITAIPLVLCLFAFYYLTL-SSMNKTMTYLREQNQVV 368
Query: 387 KLDIYRKFTNALAVAV-IVSVGWICYELYF---KSNDIYNEKWQNAWIIPAFWQILSFSL 442
KL++YRK +++ I+ +G + + + D+ + W+ ++I W + L
Sbjct: 369 KLNMYRKLIILCYISLFILFLGLLVSTFAYVGMDTVDMIEQYWKTEFLITDTWPSFVYFL 428
Query: 443 LCVICA-LWAPSQNSMRYAYSEDVNEEFDKDETSLTLIKPSPMASKDVRSVP--EPR-PV 498
+ VI A W P+ S A S + D +++ + S ++P EPR
Sbjct: 429 VFVIFAFFWRPTSTSYLLACS----HQLPTDMENVSEFDLDDINSLSDEALPNREPRNDY 484
Query: 499 QSNNGALNGDLEEDKRE 515
Q ++ ++ DL D E
Sbjct: 485 QEHDHNMDIDLASDFEE 501
>sp|Q148L1|GP108_BOVIN Protein GPR108 OS=Bos taurus GN=GPR108 PE=2 SV=1
Length = 548
Score = 41.6 bits (96), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 8/155 (5%)
Query: 171 TKTGMYNLYFIHCDLNLK------DLVVEGKSIWKNPTGYLPGRMAPLMNFYGFMSLAFV 224
+ G YNL F +CD ++ D+ V + KNP GYL PL Y MS F+
Sbjct: 220 AEEGQYNLNFHNCDNSVPGREQPFDITVMIRE--KNPEGYLSAAEIPLFKLYMVMSACFL 277
Query: 225 ILGLFWFSQYARFWREVLHLQNCITLVITLGMFEMALWYFEYAEFNETGVRPMGITAWAV 284
G+FW S + V + + + + Y N G G+
Sbjct: 278 GAGIFWVSILCKNTYNVFKIHWLMAALTFTKSVSLLFHSINYYFINSQGHPIEGLAVMHY 337
Query: 285 TFGTVKRTVARVIILMVAMGYGVVRPTLGGLTSKV 319
+K + + I ++ G+ V+ L K+
Sbjct: 338 ITHLLKGALLFITIALIGSGWAFVKYVLSDKEKKI 372
>sp|Q91WD0|GP108_MOUSE Protein GPR108 OS=Mus musculus GN=Gpr108 PE=2 SV=1
Length = 569
Score = 41.2 bits (95), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 79/207 (38%), Gaps = 25/207 (12%)
Query: 131 TQGEVIH----RPSTKDPSWP---QVFGIKFEVDEVEATLPSNSIQITKTGMYNLYFIHC 183
T GE H +P T+DPS QV G+ D + + G Y+L F +C
Sbjct: 194 TPGEHRHSSERQPPTQDPSGKEKDQVLGLGHLNDSYNFSFHIVISSRAEEGQYSLNFHNC 253
Query: 184 DLNLK------DLVVEGKSIWKNPTGYLPGRMAPLMNFYGFMSLAFVILGLFWFS----- 232
++ DL V + KNP G+L PL Y MS F+ +FW S
Sbjct: 254 HNSIPGQEQPFDLTVMIRE--KNPEGFLSAAEIPLFKLYLIMSACFLAADIFWVSVLCKN 311
Query: 233 QYARFWREVLHLQNCITLVITLGMFEMALWYFEYAEFNETGVRPMGITAWAVTFGTVKRT 292
Y+ F L T ++L +F +YF N G G+ +K
Sbjct: 312 TYSVFKIHWLMAALAFTKSVSL-LFHSINYYF----INSQGHPIEGLAVMHYITHLLKGA 366
Query: 293 VARVIILMVAMGYGVVRPTLGGLTSKV 319
+ + I ++ G+ V+ L K+
Sbjct: 367 LLFITIALIGSGWAFVKYMLSDKEKKI 393
>sp|Q8BUV8|GP107_MOUSE Protein GPR107 OS=Mus musculus GN=Gpr107 PE=2 SV=2
Length = 551
Score = 38.9 bits (89), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 60/165 (36%), Gaps = 22/165 (13%)
Query: 172 KTGMYNLYFIHCDLN-----------LKDLVVEGKSIWKNPTGYLPGRMAPLMNFYGFMS 220
+ G+Y+LYF C N L + E KNP YL PL Y M+
Sbjct: 215 QEGLYSLYFHKCSGNNVKPGEQASFSLNIAITE-----KNPNSYLSAGEIPLPKLYVSMA 269
Query: 221 LAFVILGLFWFSQYARFWREVLHLQNCITLVITLGMFEMALWYFEYAEFNETGVRPMGIT 280
L F + G W + +V + + + + +Y + G I
Sbjct: 270 LFFFLSGTIWIHILRKRRNDVFKIHWLMAALPFTKSLSLVFHAIDYHYISSQG---FPIE 326
Query: 281 AWAVTF---GTVKRTVARVIILMVAMGYGVVRPTLGGLTSKVIML 322
WAV + +K + + I ++ G+ ++ L K+ M+
Sbjct: 327 GWAVVYYITHLLKGALLFITIALIGTGWAFIKHILSDKDKKIFMI 371
>sp|Q6P6V6|GP108_RAT Protein GPR108 OS=Rattus norvegicus GN=Gpr108 PE=2 SV=1
Length = 577
Score = 38.1 bits (87), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 77/203 (37%), Gaps = 21/203 (10%)
Query: 131 TQGEVIHRPSTKDPSWPQ---VFGIKFEVDEVEATLPSNSIQITKTGMYNLYFIHCDLNL 187
+ G+ +P T+ PS + V G+ D + + G Y+L F +C +
Sbjct: 205 SDGQPQSQPPTRGPSGKEKDLVLGLGHLNDSYNFSFHIVIGSRAEEGQYSLNFHNCYNTI 264
Query: 188 K------DLVVEGKSIWKNPTGYLPGRMAPLMNFYGFMSLAFVILGLFWFS-----QYAR 236
DL V + KNP G+L PL Y MS F+ G+FW S Y+
Sbjct: 265 PGQEQPFDLTVMIRE--KNPEGFLSAAEIPLFKLYLIMSACFLAAGIFWVSVLCKNTYSV 322
Query: 237 FWREVLHLQNCITLVITLGMFEMALWYFEYAEFNETGVRPMGITAWAVTFGTVKRTVARV 296
F L T ++L +F +YF N G G+ +K + +
Sbjct: 323 FKIHWLMAALAFTKSVSL-LFHSINYYF----INSQGHPIEGLAVMHYITHLLKGALLFI 377
Query: 297 IILMVAMGYGVVRPTLGGLTSKV 319
I ++ G+ V+ L K+
Sbjct: 378 TIALIGSGWAFVKYMLSDKEKKI 400
>sp|Q9NPR9|GP108_HUMAN Protein GPR108 OS=Homo sapiens GN=GPR108 PE=2 SV=3
Length = 543
Score = 38.1 bits (87), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 69/191 (36%), Gaps = 10/191 (5%)
Query: 135 VIHRPSTKDPSWPQVFGIKFEVDEVEATLPSNSIQITKTGMYNLYFIHCDLNLK------ 188
VI PS KD V G+ + + + G Y+L F +C+ ++
Sbjct: 181 VIQGPSGKDKDL--VLGLSHLNNSYNFSFHVVIGSQAEEGQYSLNFHNCNNSVPGKEHPF 238
Query: 189 DLVVEGKSIWKNPTGYLPGRMAPLMNFYGFMSLAFVILGLFWFSQYARFWREVLHLQNCI 248
D+ V + KNP G+L PL Y MS F+ G+FW S R V + +
Sbjct: 239 DITVMIRE--KNPDGFLSAAEMPLFKLYMVMSACFLAAGIFWVSILCRNTYSVFKIHWLM 296
Query: 249 TLVITLGMFEMALWYFEYAEFNETGVRPMGITAWAVTFGTVKRTVARVIILMVAMGYGVV 308
+ + Y N G G+ +K + + I ++ G+ +
Sbjct: 297 AALAFTKSISLLFHSINYYFINSQGHPIEGLAVMYYIAHLLKGALLFITIALIGSGWAFI 356
Query: 309 RPTLGGLTSKV 319
+ L KV
Sbjct: 357 KYVLSDKEKKV 367
>sp|Q5VW38|GP107_HUMAN Protein GPR107 OS=Homo sapiens GN=GPR107 PE=1 SV=1
Length = 600
Score = 35.8 bits (81), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 59/161 (36%), Gaps = 15/161 (9%)
Query: 172 KTGMYNLYFIHC-------DLNLKDLVVEGKSIWKNPTGYLPGRMAPLMNFYGFMSLAFV 224
+ G+Y+LYF C D L +E KNP YL PL Y M+ F
Sbjct: 217 QEGLYSLYFHKCLGKELPSDKFTFSLDIEITE--KNPDSYLSAGEIPLPKLYISMAFFFF 274
Query: 225 ILGLFWFSQYARFWREVLHLQNCITLVITLGMFEMALWYFEYAEFNETGVRPMGITAWAV 284
+ G W + +V + + + + +Y + G I WAV
Sbjct: 275 LSGTIWIHILRKRRNDVFKIHWLMAALPFTKSLSLVFHAIDYHYISSQG---FPIEGWAV 331
Query: 285 TF---GTVKRTVARVIILMVAMGYGVVRPTLGGLTSKVIML 322
+ +K + + I ++ G+ ++ L K+ M+
Sbjct: 332 VYYITHLLKGALLFITIALIGTGWAFIKHILSDKDKKIFMI 372
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.137 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 187,414,194
Number of Sequences: 539616
Number of extensions: 7820178
Number of successful extensions: 17937
Number of sequences better than 100.0: 36
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 17900
Number of HSP's gapped (non-prelim): 39
length of query: 515
length of database: 191,569,459
effective HSP length: 122
effective length of query: 393
effective length of database: 125,736,307
effective search space: 49414368651
effective search space used: 49414368651
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 64 (29.3 bits)