BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010205
(515 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9D8Z1|ASCC1_MOUSE Activating signal cointegrator 1 complex subunit 1 OS=Mus musculus
GN=Ascc1 PE=2 SV=1
Length = 356
Score = 83.2 bits (204), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 86/198 (43%), Gaps = 18/198 (9%)
Query: 326 SSDLGIDKSIFIKPKTFHLTVLMLKLWNKDRVNAATNVLKSISSKVM-DALDNRPLFIRL 384
S D G+D +IF PK HLT+ ML L ++ + +L+ + + D RPL + +
Sbjct: 161 SKDRGVDSTIFQNPKKLHLTIGMLVLLSEQEIQQTCEILQRCKEEFINDISGGRPLEVEM 220
Query: 385 KGLDLMRGSKDKARILYAPVEEIGDGDRLLHACQVIIDAFNEAGLVFHRDYNKKLKQLHA 444
G++ M +LYA V +RL +++ F GL+ + KL HA
Sbjct: 221 AGIEYMNDDPAMVDVLYAKVHMKDGSNRLQELVDRVLERFQSLGLIVKEWTSVKL---HA 277
Query: 445 TLMNIRHKKRRKGTRRVDY--------------FDARDIFKQFGSKEWGEYLIKEAHLSQ 490
T+MN +K R + FD R+I K F + +G + H+SQ
Sbjct: 278 TVMNTLLRKDPNAEGRYNLYTADGKYIFKERESFDGRNILKTFENFYFGSLRLNSIHISQ 337
Query: 491 RFVYDESGFYHCCASIPF 508
RF D G Y C + F
Sbjct: 338 RFTVDSFGNYASCGHVDF 355
Score = 40.4 bits (93), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 5/105 (4%)
Query: 154 HSLSVEVGASVIRF--IKGKEGSTQKKFEKEMGVKIILPSSKKEDSIIIEGNSTDSVAKA 211
H V A + + I GK G T+KK E E I +P E I+I G + V A
Sbjct: 56 HGFRATVSAPSLLYKHIVGKRGDTKKKIEVETKTSINIPKHGHEGEIVITGQHRNGVVSA 115
Query: 212 SEKIQAIIAEAVESPSLDYSHFVSLPLAVHPELVDKLVNFQNTIL 256
+I ++ ++HF+S L E+ ++ + FQ +L
Sbjct: 116 RTRIDVLLDTFRRRQP--FTHFLSFFLN-EVEVQERFLMFQEEVL 157
>sp|Q8N9N2|ASCC1_HUMAN Activating signal cointegrator 1 complex subunit 1 OS=Homo sapiens
GN=ASCC1 PE=1 SV=1
Length = 400
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 91/185 (49%), Gaps = 7/185 (3%)
Query: 326 SSDLGIDKSIFIKPKTFHLTVLMLKLWNKDRVNAATNVLKSISSKVM-DALDNRPLFIRL 384
S D G+D SIF PK HLT+ ML L +++ + +L+ + + D +PL + +
Sbjct: 190 SMDHGVDSSIFQNPKKLHLTIGMLVLLSEEEIQQTCEMLQQCKEEFINDISGGKPLEVEM 249
Query: 385 KGLDLMRGSKDKARILYAPVEEIGDGDRLLHACQVIIDAFNEAGLVFHRDYNKKLKQLHA 444
G++ M +LYA V +RL +++ F +GL+ +++N +LHA
Sbjct: 250 AGIEYMNDDPGMVDVLYAKVHMKDGSNRLQELVDRVLERFQASGLIV-KEWNS--VKLHA 306
Query: 445 TLMNIRHKKRRKGTRRVDYFDA--RDIFKQFGSKEWGEYLIKEAHLSQRFVYDESGFYHC 502
T+MN +K R + + A + IFK+ S + G ++K L R Y+++ HC
Sbjct: 307 TVMNTLFRKDPNAEGRYNLYTAEGKYIFKERESFD-GRNILKSFALLPRLEYNDAISAHC 365
Query: 503 CASIP 507
+P
Sbjct: 366 NLCLP 370
Score = 38.9 bits (89), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Query: 166 RFIKGKEGSTQKKFEKEMGVKIILPSSKKEDSIIIEGNSTDSVAKASEKIQAIIAEAVES 225
R I GK G T+KK E E I +P ++ I+I G + V A +I ++
Sbjct: 99 RHIVGKRGDTRKKIEMETKTSISIPKPGQDGEIVITGQHRNGVISARTRIDVLLDTFRRK 158
Query: 226 PSLDYSHFVSLPLAVHPELVDKLVNFQNTILG 257
++HF++ L E+ + + FQ +L
Sbjct: 159 QP--FTHFLAFFLN-EVEVQEGFLRFQEEVLA 187
>sp|Q7TN79|AKA7G_MOUSE A-kinase anchor protein 7 isoform gamma OS=Mus musculus GN=Akap7
PE=1 SV=2
Length = 314
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 80/172 (46%), Gaps = 21/172 (12%)
Query: 341 TFHLTVLMLKLWNKDRVNAATNVLKSISSKVMDALDNRPLFIRLKGLDLMRGSKDKARIL 400
+FH+T+L+++L N+D VN T+ L + V + L+ + L + +G+ +G
Sbjct: 91 SFHITLLVMQLLNEDEVNIGTDALLELKPFVEEILEGKHLALPFQGIGTFQGQ------- 143
Query: 401 YAPVEEIGDGDR---LLHACQVIIDAFNEAGLVFHRDYNKKLKQLHATLMNIRHKK--RR 455
++ DGD LL + F E G++ K H T M + R+
Sbjct: 144 -VGFVKLADGDHVSALLEIAETAKRTFREKGILAGESRTFK---PHLTFMKLSKAPMLRK 199
Query: 456 KGTRRVDYFDARDIFKQFGSKEWGEYLIKEAHLSQRFVYDES-GFYHCCASI 506
KG R+++ +++QF +GE L+ + L +S G+YHC +SI
Sbjct: 200 KGVRKIE----PGLYEQFIDHRFGEELLYQIDLCSMLKKKQSNGYYHCESSI 247
>sp|Q6JP77|AKA7G_RAT A-kinase anchor protein 7 isoforms delta and gamma OS=Rattus
norvegicus GN=Akap7 PE=1 SV=1
Length = 353
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 78/172 (45%), Gaps = 21/172 (12%)
Query: 341 TFHLTVLMLKLWNKDRVNAATNVLKSISSKVMDALDNRPLFIRLKGLDLMRGSKDKARIL 400
+FH+T+L+++L N+D VN T+ L + V + L+ + L + G+ +G +
Sbjct: 130 SFHITLLVMQLLNEDEVNIGTDALLELKPFVEEILEGKHLTLPFHGIGTFQGQVGFVK-- 187
Query: 401 YAPVEEIGDGDR---LLHACQVIIDAFNEAGLVFHRDYNKKLKQLHATLMNIRHKKR--R 455
+ DGD LL + F E G++ K H T M + +
Sbjct: 188 ------LADGDHVSALLEIAETAKRTFQEKGILAGESRTFK---PHLTFMKLSKAPMLWK 238
Query: 456 KGTRRVDYFDARDIFKQFGSKEWGEYLIKEAHLSQRFVYDES-GFYHCCASI 506
KG R+++ +++QF +GE ++ + L +S G+YHC +SI
Sbjct: 239 KGVRKIE----PGLYEQFIDHRFGEEILYQIDLCSMLKKKQSNGYYHCESSI 286
>sp|Q9P0M2|AKA7G_HUMAN A-kinase anchor protein 7 isoform gamma OS=Homo sapiens GN=AKAP7
PE=1 SV=2
Length = 348
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 78/169 (46%), Gaps = 15/169 (8%)
Query: 341 TFHLTVLMLKLWNKDRVNAATNVLKSISSKVMDALDNRPLFIRLKGLDLMRGSKDKARIL 400
+FH+T+L+++L N+D VN + L + + + L + L + +G+ ++
Sbjct: 125 SFHITLLVMQLLNEDEVNIGIDALLELKPFIEELLQGKHLTLPFQGIGTFGN-----QVG 179
Query: 401 YAPVEEIGDGDRLLHACQVIIDAFNEAGLVFHRDYNKKLKQLHATLMNIRHKK--RRKGT 458
+ + E + LL + F E G++ + K H T M + R+ G
Sbjct: 180 FVKLAEGDHVNSLLEIAETANRTFQEKGILVGESRSFK---PHLTFMKLSKSPWLRKNGV 236
Query: 459 RRVDYFDARDIFKQFGSKEWGEYLIKEAHLSQRFVYDES-GFYHCCASI 506
+++D D++++F S +GE ++ L +S G+YHC +SI
Sbjct: 237 KKID----PDLYEKFISHRFGEEILYRIDLCSMLKKKQSNGYYHCESSI 281
>sp|A6X982|YOGD_SCHPO Uncharacterized protein C15D4.13c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC15D4.13c PE=4 SV=2
Length = 204
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 89/187 (47%), Gaps = 19/187 (10%)
Query: 325 TSSDLGIDKSIFIKPKTFHLTVLMLKLWNKDRVNAATNVLKSISSKVMDALDNRPLFIRL 384
TS+D I S F P+ HLT+ M+ + N + V + L + ++ + + + I L
Sbjct: 28 TSNDPMI-LSGFRGPRVSHLTIGMIPVKNDEDVLKCMDFLYNKEDEIRKSYGEKKITIDL 86
Query: 385 KGLDLMRGSKDKARILYA-PVEEIGDGDRLLHACQVIIDAFNEAGLVFHRDYNKKLKQLH 443
KG S +A++LYA PV++ + +++ F E L F +D + LH
Sbjct: 87 KGTSFFGKSPQEAKVLYATPVDKHNEWLKVI---------FTEHNL-FTKD--ARPLTLH 134
Query: 444 ATLMNIRHKKRRKGTRRVDYFDARDIFKQFGSKEWGEYL-IKEAHLSQRFVYDESG--FY 500
TL+N R+ K + RR+ +F++ +++G W + + + + + E G +Y
Sbjct: 135 CTLLNSRYIKYQ--GRRIRFFNSEPFMEKYGQFLWAHNIELDKLSIMKTGAVGEPGNMYY 192
Query: 501 HCCASIP 507
ASIP
Sbjct: 193 EELASIP 199
>sp|Q473U7|PNP_CUPPJ Polyribonucleotide nucleotidyltransferase OS=Cupriavidus
pinatubonensis (strain JMP134 / LMG 1197) GN=pnp PE=3
SV=1
Length = 728
Score = 38.5 bits (88), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 165 IRFIKGKEGSTQKKFEKEMGVKIILPSSKKEDSIIIEGNSTDSVAKASEKIQAIIAEA 222
IR + GK GST + KE G I + +++ +I I STD +A+A +I+ I AEA
Sbjct: 567 IREVIGKGGSTIQALTKETGTTIDI---QEDGTITIASTSTDGMAEAKRRIEGITAEA 621
>sp|Q0KCT4|PNP_CUPNH Polyribonucleotide nucleotidyltransferase OS=Cupriavidus necator
(strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=pnp
PE=3 SV=1
Length = 723
Score = 38.5 bits (88), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 165 IRFIKGKEGSTQKKFEKEMGVKIILPSSKKEDSIIIEGNSTDSVAKASEKIQAIIAEA 222
IR + GK GST + KE G I + +++ +I I STD +A+A +I+ I AEA
Sbjct: 567 IREVIGKGGSTIQALTKETGTTIDI---QEDGTITIASTSTDGMAEAKRRIEGITAEA 621
>sp|Q1LPW7|PNP_RALME Polyribonucleotide nucleotidyltransferase OS=Ralstonia
metallidurans (strain CH34 / ATCC 43123 / DSM 2839)
GN=pnp PE=3 SV=1
Length = 725
Score = 38.1 bits (87), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 165 IRFIKGKEGSTQKKFEKEMGVKIILPSSKKEDSIIIEGNSTDSVAKASEKIQAIIAEA 222
IR + GK GST + KE G I + +++ +I I STD +A+A +I+ I AEA
Sbjct: 567 IREVIGKGGSTIQALTKETGTTIDI---QEDGTITIASTSTDGMAEAKRRIEGITAEA 621
>sp|B3R3W3|PNP_CUPTR Polyribonucleotide nucleotidyltransferase OS=Cupriavidus
taiwanensis (strain R1 / LMG 19424) GN=pnp PE=3 SV=1
Length = 723
Score = 36.6 bits (83), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 165 IRFIKGKEGSTQKKFEKEMGVKIILPSSKKEDSIIIEGNSTDSVAKASEKIQAIIAEA 222
IR + GK GST + KE G I + +++ +I I ST+ +A+A +I+ I AEA
Sbjct: 567 IREVIGKGGSTIQALTKETGTTIDI---QEDGTITIASTSTEGMAEAKRRIEGITAEA 621
>sp|P41993|YKC2_CAEEL Uncharacterized protein B0280.2 OS=Caenorhabditis elegans
GN=B0280.2 PE=4 SV=3
Length = 627
Score = 32.3 bits (72), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 92/222 (41%), Gaps = 27/222 (12%)
Query: 101 HCSTSSNVSDAQLGVEVAEA----VNEGTDLTLSSSVSLDDIKDETLEGEPVP-SAERHS 155
HCS +++A L V A + G L L++S L P P AE S
Sbjct: 390 HCSEKP-IAEAPLRPPVRPAPIVPTSAGLCLVLAASFPTSSTPSRFLNPFPAPLPAE--S 446
Query: 156 LSVEVGASVIRFIKGKEGSTQKKFEKEMGVKIIL---PSSKKEDSIIIEGNSTDSVAKAS 212
+ + FIK Q+ F+ + ++ I PSS ++ II+G S++ +S
Sbjct: 447 FFGNSKSKIAYFIKPTNEQPQELFQTPVQIEKIFSSTPSSPVSNAAIIDGMKNISLSDSS 506
Query: 213 EKIQAIIAEAVESPSLDYSHFVSLPLAVHP---------ELVDKLVNFQNTILGITDVCL 263
+ IA V +P S +S + P E+VD+ + T + +T+ C
Sbjct: 507 TSVAQDIAMKVPTPLPRTSKIISASSPLPPSQDEINPLIEMVDQSSSKSETQIPVTE-C- 564
Query: 264 DENVGSKSNEDASDSEEKEQQVDQEHKVAVELNIGDNSERVK 305
S+S+ + S + Q D + + L+I NSE+ K
Sbjct: 565 -----SQSHLNGKGSAAQIQSADFDKVLNQLLSIKVNSEKSK 601
>sp|Q64213|SF01_MOUSE Splicing factor 1 OS=Mus musculus GN=Sf1 PE=1 SV=6
Length = 653
Score = 32.3 bits (72), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 19/81 (23%)
Query: 165 IRFIKGKEGSTQKKFEKEMGVKII-------------------LPSSKKEDSIIIEGNST 205
+ + G G+T K EKE KI+ LP + ++ N+
Sbjct: 153 VGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTM 212
Query: 206 DSVAKASEKIQAIIAEAVESP 226
++V KA E+I+ I+ + +E+P
Sbjct: 213 ENVKKAVEQIRNILKQGIETP 233
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.132 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 185,763,142
Number of Sequences: 539616
Number of extensions: 7857316
Number of successful extensions: 27186
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 132
Number of HSP's that attempted gapping in prelim test: 27121
Number of HSP's gapped (non-prelim): 208
length of query: 515
length of database: 191,569,459
effective HSP length: 122
effective length of query: 393
effective length of database: 125,736,307
effective search space: 49414368651
effective search space used: 49414368651
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)