Query 010211
Match_columns 515
No_of_seqs 276 out of 1672
Neff 5.3
Searched_HMMs 29240
Date Mon Mar 25 22:18:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010211.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010211hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gr4_A Pyruvate kinase isozyme 100.0 4E-125 1E-129 1016.1 47.8 425 75-508 46-504 (550)
2 3khd_A Pyruvate kinase; malari 100.0 1E-124 4E-129 1007.6 39.4 408 96-504 43-473 (520)
3 3hqn_D Pyruvate kinase, PK; TI 100.0 5E-124 2E-128 1000.2 41.7 406 94-501 15-445 (499)
4 4drs_A Pyruvate kinase; glycol 100.0 6E-123 2E-127 997.9 47.0 410 94-504 39-479 (526)
5 3gg8_A Pyruvate kinase; malari 100.0 4E-123 1E-127 994.9 43.2 407 97-504 34-464 (511)
6 3qtg_A Pyruvate kinase, PK; TI 100.0 3E-123 1E-127 984.3 41.3 400 97-500 13-424 (461)
7 3t05_A Pyruvate kinase, PK; te 100.0 1E-122 3E-127 1009.7 39.3 412 92-504 16-447 (606)
8 1e0t_A Pyruvate kinase, PK; ph 100.0 3E-122 1E-126 982.3 42.0 403 98-501 1-422 (470)
9 2e28_A Pyruvate kinase, PK; al 100.0 1E-120 5E-125 993.5 43.9 404 98-502 2-426 (587)
10 1a3w_A Pyruvate kinase; allost 100.0 2E-117 6E-122 952.6 34.7 406 96-501 16-446 (500)
11 1izc_A Macrophomate synthase i 99.8 4.7E-19 1.6E-23 182.7 7.3 149 271-434 108-303 (339)
12 2v5j_A 2,4-dihydroxyhept-2-ENE 99.7 2.6E-19 8.8E-24 180.8 0.8 126 269-408 100-260 (287)
13 2vws_A YFAU, 2-keto-3-deoxy su 99.7 2.9E-19 1E-23 178.3 -0.2 124 270-407 80-238 (267)
14 3qz6_A HPCH/HPAI aldolase; str 99.7 3.7E-17 1.3E-21 162.8 9.2 127 271-410 79-240 (261)
15 1dxe_A 2-dehydro-3-deoxy-galac 99.7 5.5E-17 1.9E-21 160.7 9.6 127 269-409 80-240 (256)
16 1sgj_A Citrate lyase, beta sub 99.6 3.7E-15 1.3E-19 149.5 12.2 130 267-405 81-220 (284)
17 2xz9_A Phosphoenolpyruvate-pro 99.4 4.7E-13 1.6E-17 137.2 8.5 133 263-406 118-277 (324)
18 3qll_A Citrate lyase; beta bar 99.2 3E-11 1E-15 123.4 10.9 132 266-405 113-255 (316)
19 2ols_A Phosphoenolpyruvate syn 99.2 2.1E-11 7.3E-16 138.0 8.1 131 265-406 622-777 (794)
20 1u5h_A CITE; TIM barrel, struc 99.1 1.2E-10 4.3E-15 116.3 11.1 125 267-406 71-209 (273)
21 2hwg_A Phosphoenolpyruvate-pro 99.1 8.4E-11 2.9E-15 128.7 10.2 133 263-406 367-526 (575)
22 3qqw_A Putative citrate lyase; 99.1 2E-10 6.8E-15 118.1 10.3 131 268-405 96-254 (332)
23 2wqd_A Phosphoenolpyruvate-pro 99.1 1.3E-10 4.5E-15 127.2 9.4 129 267-406 373-528 (572)
24 3r4i_A Citrate lyase; TIM beta 99.0 1.1E-09 3.8E-14 112.8 10.9 129 270-405 97-253 (339)
25 3oyz_A Malate synthase; TIM ba 98.8 1E-08 3.6E-13 108.3 10.8 133 266-405 94-258 (433)
26 1vbg_A Pyruvate,orthophosphate 98.6 7.2E-08 2.5E-12 110.1 8.8 116 280-406 701-860 (876)
27 1kbl_A PPDK, pyruvate phosphat 98.4 2E-07 7E-12 106.4 7.6 116 280-406 695-854 (873)
28 1h6z_A Pyruvate phosphate diki 97.7 0.00013 4.3E-09 83.8 10.7 136 260-406 697-880 (913)
29 3cux_A Malate synthase; TIM ba 97.6 0.00013 4.4E-09 79.2 8.7 125 278-406 202-364 (528)
30 3cuz_A MSA, malate synthase A; 97.6 0.00038 1.3E-08 75.6 12.0 121 281-406 207-366 (532)
31 1p7t_A MSG, malate synthase G; 97.4 0.0002 6.8E-09 79.5 8.1 130 270-406 372-536 (731)
32 2x0s_A Pyruvate phosphate diki 96.5 0.0085 2.9E-07 69.1 11.0 113 283-406 727-880 (913)
33 4af0_A Inosine-5'-monophosphat 96.0 0.11 3.8E-06 56.5 15.4 125 266-406 279-413 (556)
34 3f4w_A Putative hexulose 6 pho 94.7 0.32 1.1E-05 45.2 12.2 137 273-428 70-209 (211)
35 3odm_A Pepcase, PEPC, phosphoe 94.5 0.057 2E-06 58.6 7.1 92 279-370 138-259 (560)
36 1jqo_A Phosphoenolpyruvate car 94.2 0.095 3.3E-06 60.6 8.7 107 280-386 528-653 (970)
37 3inp_A D-ribulose-phosphate 3- 94.2 0.21 7.3E-06 49.0 10.1 140 272-427 101-244 (246)
38 3ovp_A Ribulose-phosphate 3-ep 94.0 0.43 1.5E-05 46.0 11.7 138 273-430 80-221 (228)
39 3ffs_A Inosine-5-monophosphate 93.5 0.59 2E-05 49.0 12.5 119 270-406 146-275 (400)
40 3usb_A Inosine-5'-monophosphat 93.1 0.95 3.3E-05 48.7 13.7 123 268-406 256-388 (511)
41 4fo4_A Inosine 5'-monophosphat 93.1 1.7 5.9E-05 44.9 15.2 122 268-406 108-240 (366)
42 1h1y_A D-ribulose-5-phosphate 93.1 1 3.5E-05 42.8 12.5 138 272-428 79-223 (228)
43 1jqn_A Pepcase, PEPC, phosphoe 92.6 0.17 5.7E-06 58.1 7.1 153 278-430 466-639 (883)
44 1ydn_A Hydroxymethylglutaryl-C 92.3 0.83 2.8E-05 45.2 11.1 155 265-429 23-197 (295)
45 3ctl_A D-allulose-6-phosphate 92.3 2 6.7E-05 41.5 13.5 138 273-427 73-218 (231)
46 2qjg_A Putative aldolase MJ040 91.9 1.2 4.1E-05 43.1 11.6 42 114-155 102-145 (273)
47 4fxs_A Inosine-5'-monophosphat 91.7 1.3 4.3E-05 47.6 12.3 124 267-406 230-363 (496)
48 4avf_A Inosine-5'-monophosphat 91.7 2.3 8E-05 45.4 14.4 123 267-406 228-361 (490)
49 3r2g_A Inosine 5'-monophosphat 91.1 3 0.0001 43.1 14.0 119 267-406 99-228 (361)
50 1tqj_A Ribulose-phosphate 3-ep 91.0 0.52 1.8E-05 45.3 7.8 139 272-425 77-220 (230)
51 3khj_A Inosine-5-monophosphate 90.9 3.3 0.00011 42.6 14.2 119 270-406 107-236 (361)
52 3igs_A N-acetylmannosamine-6-p 90.8 4.2 0.00014 39.1 14.0 135 270-429 91-230 (232)
53 2z6i_A Trans-2-enoyl-ACP reduc 90.1 2.5 8.4E-05 42.6 12.1 111 271-406 79-191 (332)
54 1w8s_A FBP aldolase, fructose- 89.8 4.1 0.00014 39.9 13.1 87 267-360 158-250 (263)
55 1jcn_A Inosine monophosphate d 89.6 7.9 0.00027 41.2 16.2 122 269-407 256-388 (514)
56 3ajx_A 3-hexulose-6-phosphate 89.5 2.7 9.1E-05 38.8 11.1 132 273-424 70-204 (207)
57 1rpx_A Protein (ribulose-phosp 89.0 4.3 0.00015 38.2 12.3 137 271-424 82-225 (230)
58 1h1y_A D-ribulose-5-phosphate 88.8 3.3 0.00011 39.2 11.4 133 271-429 23-171 (228)
59 2fli_A Ribulose-phosphate 3-ep 88.8 4.7 0.00016 37.3 12.3 136 273-425 77-217 (220)
60 1tqx_A D-ribulose-5-phosphate 88.7 1.8 6.2E-05 41.8 9.5 128 281-427 86-222 (227)
61 1y0e_A Putative N-acetylmannos 88.7 7.3 0.00025 36.1 13.6 136 270-424 78-219 (223)
62 1mxs_A KDPG aldolase; 2-keto-3 88.6 4.6 0.00016 38.7 12.3 116 271-426 42-161 (225)
63 2c6q_A GMP reductase 2; TIM ba 88.5 6.5 0.00022 40.1 14.1 122 269-406 119-252 (351)
64 1wbh_A KHG/KDPG aldolase; lyas 88.4 3.5 0.00012 39.2 11.3 103 271-405 32-135 (214)
65 3bo9_A Putative nitroalkan dio 88.3 5 0.00017 40.3 12.9 113 270-406 92-205 (326)
66 1gte_A Dihydropyrimidine dehyd 88.2 4.4 0.00015 46.9 14.0 120 273-407 654-817 (1025)
67 1vhc_A Putative KHG/KDPG aldol 87.8 3.9 0.00013 39.3 11.2 103 271-405 33-136 (224)
68 3q58_A N-acetylmannosamine-6-p 87.6 6.8 0.00023 37.6 12.8 131 270-425 91-226 (229)
69 3ble_A Citramalate synthase fr 87.5 7.7 0.00026 39.3 13.8 158 265-429 38-211 (337)
70 2ftp_A Hydroxymethylglutaryl-C 87.1 5.2 0.00018 39.7 12.1 156 265-429 27-201 (302)
71 2yw3_A 4-hydroxy-2-oxoglutarat 87.1 3.3 0.00011 39.0 10.1 101 271-405 29-130 (207)
72 3qja_A IGPS, indole-3-glycerol 87.0 6.6 0.00023 38.8 12.6 129 272-424 127-260 (272)
73 3jr2_A Hexulose-6-phosphate sy 87.0 1.5 5.1E-05 41.4 7.6 137 274-428 77-215 (218)
74 1eep_A Inosine 5'-monophosphat 86.3 7.8 0.00027 40.0 13.3 120 269-405 154-284 (404)
75 3cu2_A Ribulose-5-phosphate 3- 85.9 5.2 0.00018 38.8 11.0 137 271-425 83-235 (237)
76 1w8s_A FBP aldolase, fructose- 85.3 4.7 0.00016 39.4 10.5 128 266-406 39-179 (263)
77 1vrd_A Inosine-5'-monophosphat 85.1 8 0.00027 40.8 12.9 121 269-406 238-369 (494)
78 1p1x_A Deoxyribose-phosphate a 84.1 6.5 0.00022 38.8 10.8 154 263-430 23-194 (260)
79 3eeg_A 2-isopropylmalate synth 83.5 29 0.00099 34.9 15.7 158 265-430 25-194 (325)
80 1ydo_A HMG-COA lyase; TIM-barr 83.2 16 0.00055 36.5 13.6 157 264-429 24-199 (307)
81 1xi3_A Thiamine phosphate pyro 83.2 14 0.00047 33.7 12.3 129 274-428 80-212 (215)
82 1f76_A Dihydroorotate dehydrog 82.8 19 0.00064 35.9 13.9 115 279-406 164-318 (336)
83 3bw2_A 2-nitropropane dioxygen 82.6 18 0.0006 36.8 13.8 111 271-406 113-237 (369)
84 4g9p_A 4-hydroxy-3-methylbut-2 82.3 4.7 0.00016 42.4 9.4 153 271-430 42-223 (406)
85 4e38_A Keto-hydroxyglutarate-a 82.2 5.9 0.0002 38.4 9.5 37 355-405 117-153 (232)
86 2gjl_A Hypothetical protein PA 81.8 13 0.00046 36.9 12.4 111 271-406 87-201 (328)
87 1q6o_A Humps, 3-keto-L-gulonat 81.7 12 0.00042 34.8 11.4 137 275-428 75-213 (216)
88 3tsm_A IGPS, indole-3-glycerol 81.4 16 0.00056 36.1 12.6 128 272-423 134-266 (272)
89 2cw6_A Hydroxymethylglutaryl-C 80.9 12 0.00043 36.9 11.7 156 265-429 24-198 (298)
90 1n7k_A Deoxyribose-phosphate a 80.4 8.8 0.0003 37.3 10.1 141 263-427 31-192 (234)
91 1yad_A Regulatory protein TENI 80.2 19 0.00066 33.4 12.2 132 274-429 82-215 (221)
92 2rdx_A Mandelate racemase/muco 80.1 53 0.0018 33.2 16.4 56 308-371 237-294 (379)
93 1me8_A Inosine-5'-monophosphat 79.7 26 0.00091 37.2 14.5 120 270-406 244-381 (503)
94 1yxy_A Putative N-acetylmannos 79.6 20 0.00067 33.6 12.1 131 270-425 91-231 (234)
95 1jub_A Dihydroorotate dehydrog 79.5 28 0.00095 34.1 13.7 126 268-407 106-272 (311)
96 1zfj_A Inosine monophosphate d 79.1 31 0.001 36.2 14.6 122 268-406 233-365 (491)
97 1ypf_A GMP reductase; GUAC, pu 79.1 23 0.00078 35.6 13.1 123 267-406 105-239 (336)
98 3nvt_A 3-deoxy-D-arabino-heptu 78.6 18 0.00062 37.6 12.4 111 271-406 160-283 (385)
99 1at0_A 17-hedgehog; developmen 78.5 5.8 0.0002 35.4 7.6 62 179-246 58-133 (145)
100 3g8r_A Probable spore coat pol 78.3 17 0.00058 37.4 11.9 93 293-410 78-172 (350)
101 1ub3_A Aldolase protein; schif 78.1 6.3 0.00021 37.8 8.2 147 263-426 14-173 (220)
102 1vcv_A Probable deoxyribose-ph 77.9 5.2 0.00018 38.7 7.5 147 263-431 12-183 (226)
103 2v82_A 2-dehydro-3-deoxy-6-pho 77.6 22 0.00074 32.7 11.6 125 271-431 71-205 (212)
104 2qjg_A Putative aldolase MJ040 77.5 51 0.0017 31.4 15.9 135 271-428 103-259 (273)
105 3ngj_A Deoxyribose-phosphate a 76.1 14 0.00048 36.0 10.1 149 263-426 38-197 (239)
106 3rmj_A 2-isopropylmalate synth 75.9 48 0.0016 34.0 14.6 159 264-430 30-200 (370)
107 1wa3_A 2-keto-3-deoxy-6-phosph 75.5 11 0.00038 34.5 8.8 106 267-406 21-131 (205)
108 3r12_A Deoxyribose-phosphate a 75.3 13 0.00046 36.7 9.8 149 263-426 54-213 (260)
109 3daq_A DHDPS, dihydrodipicolin 75.1 11 0.00038 37.3 9.3 97 271-371 27-134 (292)
110 2tps_A Protein (thiamin phosph 74.9 31 0.0011 31.7 11.9 126 275-429 89-223 (227)
111 1mzh_A Deoxyribose-phosphate a 74.7 28 0.00097 32.9 11.7 144 263-425 15-171 (225)
112 2qr6_A IMP dehydrogenase/GMP r 74.6 23 0.00077 36.3 11.8 114 276-407 174-307 (393)
113 1rpx_A Protein (ribulose-phosp 74.4 11 0.00037 35.3 8.7 112 270-406 26-147 (230)
114 1ep3_A Dihydroorotate dehydrog 74.4 65 0.0022 31.1 14.8 130 268-413 111-277 (311)
115 3zwt_A Dihydroorotate dehydrog 73.9 70 0.0024 32.7 15.3 117 279-407 175-328 (367)
116 1ka9_F Imidazole glycerol phos 73.4 42 0.0014 31.4 12.6 132 270-422 87-242 (252)
117 1thf_D HISF protein; thermophI 73.3 29 0.001 32.6 11.5 133 270-423 86-242 (253)
118 1geq_A Tryptophan synthase alp 73.2 61 0.0021 30.4 13.7 119 271-406 99-220 (248)
119 3i65_A Dihydroorotate dehydrog 73.2 49 0.0017 34.7 14.0 87 308-406 268-374 (415)
120 3oa3_A Aldolase; structural ge 73.1 13 0.00045 37.2 9.2 145 263-428 69-230 (288)
121 3s5o_A 4-hydroxy-2-oxoglutarat 73.1 12 0.00043 37.2 9.1 98 271-371 39-148 (307)
122 1zco_A 2-dehydro-3-deoxyphosph 72.7 59 0.002 31.7 13.8 122 271-417 41-177 (262)
123 3fkr_A L-2-keto-3-deoxyarabona 72.5 10 0.00035 37.9 8.3 100 271-371 33-143 (309)
124 3hgj_A Chromate reductase; TIM 72.5 21 0.00071 36.2 10.8 131 264-406 141-318 (349)
125 3e96_A Dihydrodipicolinate syn 71.7 13 0.00044 37.2 8.9 98 271-372 37-144 (316)
126 3igs_A N-acetylmannosamine-6-p 71.6 28 0.00095 33.3 10.9 112 264-404 32-154 (232)
127 1to3_A Putative aldolase YIHT; 71.4 68 0.0023 31.9 14.1 84 271-354 181-271 (304)
128 2gou_A Oxidoreductase, FMN-bin 71.3 41 0.0014 34.3 12.7 122 264-407 150-323 (365)
129 3b4u_A Dihydrodipicolinate syn 71.1 20 0.00069 35.4 10.1 98 271-371 28-139 (294)
130 1wa3_A 2-keto-3-deoxy-6-phosph 70.9 29 0.00098 31.7 10.5 124 271-428 74-202 (205)
131 3q58_A N-acetylmannosamine-6-p 70.9 31 0.0011 32.9 11.0 112 264-404 32-154 (229)
132 1h5y_A HISF; histidine biosynt 70.1 66 0.0023 29.5 13.0 132 271-422 90-244 (253)
133 2k8i_A SLYD, peptidyl-prolyl C 69.9 16 0.00054 33.6 8.4 59 180-238 51-118 (171)
134 3vnd_A TSA, tryptophan synthas 69.6 17 0.00059 35.8 9.1 91 270-370 35-153 (267)
135 3kws_A Putative sugar isomeras 69.5 49 0.0017 31.2 12.2 145 271-422 42-216 (287)
136 1wv2_A Thiazole moeity, thiazo 69.3 26 0.0009 34.7 10.2 80 331-426 157-236 (265)
137 3qfe_A Putative dihydrodipicol 69.1 17 0.00059 36.4 9.2 98 271-371 36-145 (318)
138 4fxs_A Inosine-5'-monophosphat 69.0 8 0.00027 41.3 7.0 50 100-149 219-268 (496)
139 2wqp_A Polysialic acid capsule 68.9 89 0.003 32.0 14.5 104 293-424 91-203 (349)
140 3inp_A D-ribulose-phosphate 3- 68.7 34 0.0012 33.3 10.9 132 271-428 44-191 (246)
141 2r8w_A AGR_C_1641P; APC7498, d 68.3 40 0.0014 34.0 11.8 97 271-371 59-166 (332)
142 2v82_A 2-dehydro-3-deoxy-6-pho 68.2 28 0.00095 32.0 9.8 103 271-405 23-127 (212)
143 2wkj_A N-acetylneuraminate lya 68.2 23 0.00079 35.2 9.8 97 271-371 36-144 (303)
144 2y88_A Phosphoribosyl isomeras 68.1 22 0.00077 33.2 9.3 126 270-415 86-234 (244)
145 3qze_A DHDPS, dihydrodipicolin 67.9 29 0.001 34.7 10.6 97 271-371 48-155 (314)
146 2nv1_A Pyridoxal biosynthesis 67.8 30 0.001 34.1 10.6 122 271-423 32-168 (305)
147 3m5v_A DHDPS, dihydrodipicolin 67.8 32 0.0011 34.1 10.7 97 271-371 32-140 (301)
148 3exr_A RMPD (hexulose-6-phosph 67.6 53 0.0018 31.0 11.8 138 276-427 78-217 (221)
149 3f4w_A Putative hexulose 6 pho 67.5 64 0.0022 29.3 12.2 113 270-406 16-134 (211)
150 1nvm_A HOA, 4-hydroxy-2-oxoval 67.4 1E+02 0.0034 31.0 14.5 149 265-429 27-191 (345)
151 1vyr_A Pentaerythritol tetrani 67.4 59 0.002 33.1 12.9 60 331-408 265-325 (364)
152 3na8_A Putative dihydrodipicol 66.9 28 0.00096 34.8 10.2 97 271-371 49-156 (315)
153 3flu_A DHDPS, dihydrodipicolin 66.8 36 0.0012 33.6 10.9 97 271-371 32-139 (297)
154 2ehh_A DHDPS, dihydrodipicolin 66.8 48 0.0017 32.6 11.8 97 271-371 25-132 (294)
155 3vav_A 3-methyl-2-oxobutanoate 66.6 29 0.00098 34.6 10.0 133 262-406 31-193 (275)
156 3qja_A IGPS, indole-3-glycerol 66.5 18 0.00063 35.5 8.6 108 269-407 73-190 (272)
157 2cu0_A Inosine-5'-monophosphat 66.4 73 0.0025 33.5 13.8 118 270-406 230-357 (486)
158 3m47_A Orotidine 5'-phosphate 66.4 25 0.00085 33.5 9.3 129 274-427 85-223 (228)
159 3cpr_A Dihydrodipicolinate syn 66.3 50 0.0017 32.7 11.9 97 271-371 41-148 (304)
160 3vnd_A TSA, tryptophan synthas 66.3 35 0.0012 33.5 10.6 120 271-406 114-235 (267)
161 2yxg_A DHDPS, dihydrodipicolin 66.3 50 0.0017 32.4 11.7 97 271-371 25-132 (289)
162 3l21_A DHDPS, dihydrodipicolin 66.2 31 0.001 34.3 10.3 97 271-371 40-147 (304)
163 3noy_A 4-hydroxy-3-methylbut-2 66.0 83 0.0028 32.5 13.5 139 270-428 49-202 (366)
164 1tv5_A Dhodehase, dihydroorota 66.0 44 0.0015 35.3 11.9 89 308-408 296-404 (443)
165 3eb2_A Putative dihydrodipicol 65.9 22 0.00076 35.2 9.2 97 271-371 29-136 (300)
166 1o66_A 3-methyl-2-oxobutanoate 65.6 38 0.0013 33.7 10.7 147 263-430 20-196 (275)
167 3tak_A DHDPS, dihydrodipicolin 65.6 36 0.0012 33.4 10.6 96 271-371 26-133 (291)
168 1vzw_A Phosphoribosyl isomeras 65.6 35 0.0012 31.9 10.2 134 270-422 87-239 (244)
169 3cqj_A L-ribulose-5-phosphate 65.5 38 0.0013 32.2 10.5 143 271-420 34-212 (295)
170 3dx5_A Uncharacterized protein 65.3 78 0.0027 29.7 12.6 145 271-422 19-190 (286)
171 1xky_A Dihydrodipicolinate syn 64.9 51 0.0017 32.6 11.6 97 271-371 37-144 (301)
172 1aj0_A DHPS, dihydropteroate s 64.3 20 0.00068 35.7 8.4 68 100-170 14-102 (282)
173 3o63_A Probable thiamine-phosp 64.1 52 0.0018 31.7 11.2 126 276-429 108-242 (243)
174 1f6k_A N-acetylneuraminate lya 64.1 55 0.0019 32.1 11.6 97 271-371 28-136 (293)
175 2rfg_A Dihydrodipicolinate syn 63.9 45 0.0015 32.9 10.9 97 271-371 25-132 (297)
176 3m5v_A DHDPS, dihydrodipicolin 63.9 38 0.0013 33.5 10.4 97 325-430 35-134 (301)
177 1tqj_A Ribulose-phosphate 3-ep 63.7 36 0.0012 32.3 9.8 135 271-430 21-168 (230)
178 1rd5_A Tryptophan synthase alp 63.7 74 0.0025 30.3 12.2 90 270-370 35-148 (262)
179 3l5l_A Xenobiotic reductase A; 63.3 23 0.0008 36.0 8.9 128 264-406 147-325 (363)
180 1vzw_A Phosphoribosyl isomeras 63.2 22 0.00074 33.4 8.2 125 271-413 36-173 (244)
181 3ctl_A D-allulose-6-phosphate 62.6 80 0.0027 30.1 12.1 130 271-427 17-162 (231)
182 4fo4_A Inosine 5'-monophosphat 62.4 14 0.00047 38.1 7.0 47 103-149 99-145 (366)
183 3si9_A DHDPS, dihydrodipicolin 61.8 36 0.0012 34.1 9.9 97 271-371 47-154 (315)
184 3cgm_A SLYD, peptidyl-prolyl C 61.8 33 0.0011 31.0 8.8 59 180-238 46-114 (158)
185 2kfw_A FKBP-type peptidyl-prol 61.7 8.7 0.0003 36.3 5.0 59 180-238 51-118 (196)
186 1vc4_A Indole-3-glycerol phosp 61.6 43 0.0015 32.4 10.1 129 272-422 120-252 (254)
187 3glc_A Aldolase LSRF; TIM barr 61.1 1.1E+02 0.0039 30.3 13.3 131 273-428 131-279 (295)
188 2v9d_A YAGE; dihydrodipicolini 61.1 43 0.0015 33.9 10.4 97 271-371 56-163 (343)
189 1z41_A YQJM, probable NADH-dep 61.1 54 0.0019 32.8 11.1 128 264-407 133-308 (338)
190 2ekc_A AQ_1548, tryptophan syn 60.7 59 0.002 31.4 11.0 117 271-406 113-234 (262)
191 1eep_A Inosine 5'-monophosphat 60.6 12 0.00041 38.5 6.3 50 100-149 141-190 (404)
192 2h6r_A Triosephosphate isomera 60.6 22 0.00076 33.5 7.7 130 275-423 77-216 (219)
193 1xm3_A Thiazole biosynthesis p 60.5 1.2E+02 0.0042 29.1 13.4 92 324-431 140-232 (264)
194 2w6r_A Imidazole glycerol phos 60.0 51 0.0018 31.2 10.3 127 270-415 86-238 (266)
195 1o5k_A DHDPS, dihydrodipicolin 59.8 58 0.002 32.2 11.0 97 271-371 37-144 (306)
196 3d0c_A Dihydrodipicolinate syn 59.8 48 0.0016 33.1 10.3 97 271-371 37-143 (314)
197 3nav_A Tryptophan synthase alp 59.3 57 0.0019 32.1 10.6 117 271-406 116-237 (271)
198 3gr7_A NADPH dehydrogenase; fl 59.3 79 0.0027 31.8 12.0 127 264-406 133-307 (340)
199 3ndz_A Endoglucanase D; cellot 59.2 22 0.00074 35.7 7.7 55 111-168 42-106 (345)
200 3ndo_A Deoxyribose-phosphate a 59.0 25 0.00084 34.1 7.8 151 263-427 24-188 (231)
201 3khj_A Inosine-5-monophosphate 58.9 15 0.0005 37.8 6.5 45 103-149 98-142 (361)
202 3tha_A Tryptophan synthase alp 58.8 59 0.002 31.8 10.5 116 272-406 108-227 (252)
203 2vc6_A MOSA, dihydrodipicolina 58.8 58 0.002 32.0 10.6 97 271-371 25-132 (292)
204 1m3u_A 3-methyl-2-oxobutanoate 58.6 33 0.0011 33.9 8.7 132 263-406 20-181 (264)
205 2kr7_A FKBP-type peptidyl-prol 58.4 40 0.0014 30.1 8.6 60 180-239 56-124 (151)
206 3ivs_A Homocitrate synthase, m 58.0 1.8E+02 0.0063 30.4 15.3 163 250-428 48-221 (423)
207 2ztj_A Homocitrate synthase; ( 57.8 1.7E+02 0.0058 29.9 16.5 155 264-428 21-185 (382)
208 1tvn_A Cellulase, endoglucanas 57.8 18 0.00061 34.9 6.6 53 112-167 39-101 (293)
209 3usb_A Inosine-5'-monophosphat 57.7 15 0.00051 39.4 6.5 51 99-149 243-293 (511)
210 4dt4_A FKBP-type 16 kDa peptid 57.5 39 0.0013 31.0 8.5 60 180-239 74-143 (169)
211 3dz1_A Dihydrodipicolinate syn 57.3 70 0.0024 31.8 11.1 95 271-371 33-140 (313)
212 2r14_A Morphinone reductase; H 56.9 86 0.0029 32.1 11.9 33 362-407 296-329 (377)
213 3ovp_A Ribulose-phosphate 3-ep 56.8 62 0.0021 30.8 10.2 116 271-413 21-149 (228)
214 3nav_A Tryptophan synthase alp 56.5 77 0.0026 31.1 11.0 106 253-369 21-154 (271)
215 3icg_A Endoglucanase D; cellul 56.3 24 0.00081 37.4 7.8 54 112-168 46-109 (515)
216 3i65_A Dihydroorotate dehydrog 55.9 29 0.00099 36.5 8.2 100 263-366 278-401 (415)
217 3h5d_A DHDPS, dihydrodipicolin 55.2 64 0.0022 32.1 10.4 97 271-371 32-140 (311)
218 2e6f_A Dihydroorotate dehydrog 54.9 70 0.0024 31.2 10.5 129 268-409 106-276 (314)
219 2a4a_A Deoxyribose-phosphate a 54.7 30 0.001 34.5 7.7 147 263-429 43-215 (281)
220 2ojp_A DHDPS, dihydrodipicolin 54.6 52 0.0018 32.3 9.5 97 271-371 26-133 (292)
221 4avf_A Inosine-5'-monophosphat 54.3 18 0.00063 38.4 6.5 50 100-149 217-266 (490)
222 3ngf_A AP endonuclease, family 54.3 1.1E+02 0.0038 28.5 11.5 98 271-370 27-149 (269)
223 1jcn_A Inosine monophosphate d 54.1 16 0.00055 38.8 6.1 51 100-150 243-293 (514)
224 1qo2_A Molecule: N-((5-phospho 53.5 64 0.0022 30.1 9.6 128 270-419 85-236 (241)
225 3kru_A NADH:flavin oxidoreduct 53.4 59 0.002 32.9 9.9 128 264-406 132-307 (343)
226 2uva_G Fatty acid synthase bet 53.4 56 0.0019 41.0 11.4 120 270-405 656-794 (2060)
227 3flu_A DHDPS, dihydrodipicolin 53.3 84 0.0029 30.9 10.8 96 325-430 35-133 (297)
228 1kbi_A Cytochrome B2, L-LCR; f 53.3 74 0.0025 34.1 11.1 96 291-407 331-433 (511)
229 2czd_A Orotidine 5'-phosphate 53.1 1.2E+02 0.0042 27.7 11.4 127 271-426 69-205 (208)
230 1egz_A Endoglucanase Z, EGZ, C 52.6 18 0.00063 34.7 5.7 53 112-167 39-99 (291)
231 2o55_A Putative glycerophospho 52.4 41 0.0014 32.0 8.1 58 354-427 201-258 (258)
232 3qze_A DHDPS, dihydrodipicolin 52.0 79 0.0027 31.5 10.4 96 325-430 51-149 (314)
233 3kts_A Glycerol uptake operon 51.6 18 0.00063 34.1 5.4 127 268-409 17-182 (192)
234 3tva_A Xylose isomerase domain 51.5 93 0.0032 29.2 10.5 99 272-370 26-157 (290)
235 4djd_D C/Fe-SP, corrinoid/iron 51.4 34 0.0011 34.8 7.6 150 267-429 141-317 (323)
236 2htm_A Thiazole biosynthesis p 51.4 64 0.0022 32.0 9.4 81 331-426 146-227 (268)
237 2hmc_A AGR_L_411P, dihydrodipi 51.4 54 0.0019 33.3 9.2 96 271-371 51-157 (344)
238 2kct_A Cytochrome C-type bioge 51.2 61 0.0021 27.2 7.9 55 166-220 7-65 (94)
239 3nbm_A PTS system, lactose-spe 51.2 11 0.00039 32.1 3.5 62 294-370 22-83 (108)
240 3lab_A Putative KDPG (2-keto-3 50.9 75 0.0026 30.4 9.6 101 274-406 32-139 (217)
241 2fli_A Ribulose-phosphate 3-ep 50.5 1.4E+02 0.0048 27.1 11.3 87 271-372 20-116 (220)
242 2gjl_A Hypothetical protein PA 50.3 1.9E+02 0.0066 28.3 13.4 113 269-408 28-147 (328)
243 1edg_A Endoglucanase A; family 50.3 29 0.00099 34.9 7.0 57 109-168 59-124 (380)
244 1to3_A Putative aldolase YIHT; 50.2 2E+02 0.0069 28.5 14.0 85 331-431 191-291 (304)
245 3ewb_X 2-isopropylmalate synth 50.1 2E+02 0.0067 28.3 16.4 154 265-429 24-192 (293)
246 3a5f_A Dihydrodipicolinate syn 49.9 51 0.0017 32.4 8.6 97 271-371 26-133 (291)
247 3l55_A B-1,4-endoglucanase/cel 49.9 27 0.00093 35.4 6.7 55 111-168 52-114 (353)
248 1qop_A Tryptophan synthase alp 49.4 83 0.0028 30.3 9.9 118 271-406 113-234 (268)
249 4eiv_A Deoxyribose-phosphate a 49.3 1.1E+02 0.0037 30.8 10.8 154 262-429 36-209 (297)
250 1pii_A N-(5'phosphoribosyl)ant 48.8 24 0.00082 37.4 6.3 110 268-403 165-279 (452)
251 2wkj_A N-acetylneuraminate lya 48.7 1.2E+02 0.0042 29.8 11.2 95 325-430 39-137 (303)
252 2ehh_A DHDPS, dihydrodipicolin 48.5 98 0.0033 30.3 10.4 95 325-430 28-126 (294)
253 2yci_X 5-methyltetrahydrofolat 48.0 22 0.00076 35.0 5.5 53 115-170 38-90 (271)
254 2nli_A Lactate oxidase; flavoe 47.5 1.1E+02 0.0039 31.0 11.0 95 291-406 217-313 (368)
255 1oy0_A Ketopantoate hydroxymet 47.4 80 0.0027 31.4 9.5 133 261-405 35-198 (281)
256 1i60_A IOLI protein; beta barr 47.3 1.5E+02 0.005 27.3 11.0 121 271-396 18-164 (278)
257 3daq_A DHDPS, dihydrodipicolin 47.1 1.4E+02 0.0047 29.2 11.2 95 325-430 30-128 (292)
258 1yad_A Regulatory protein TENI 47.0 52 0.0018 30.4 7.7 85 271-365 121-216 (221)
259 2z6i_A Trans-2-enoyl-ACP reduc 46.9 1.2E+02 0.0039 30.2 10.8 110 269-407 25-138 (332)
260 3ayr_A Endoglucanase; TIM barr 46.9 45 0.0016 33.5 7.9 53 112-167 63-125 (376)
261 4ef8_A Dihydroorotate dehydrog 46.9 1.7E+02 0.0057 29.8 12.1 117 278-407 153-307 (354)
262 3bdk_A D-mannonate dehydratase 46.7 90 0.0031 32.2 10.1 63 268-330 31-112 (386)
263 1yx1_A Hypothetical protein PA 46.4 1.1E+02 0.0038 28.4 10.1 92 271-370 27-130 (264)
264 2r91_A 2-keto-3-deoxy-(6-phosp 46.3 2.1E+02 0.0074 27.7 12.4 95 271-371 23-128 (286)
265 3dz1_A Dihydrodipicolinate syn 46.2 1E+02 0.0035 30.5 10.2 93 325-430 36-132 (313)
266 1p0k_A Isopentenyl-diphosphate 45.8 98 0.0033 30.9 10.1 30 365-406 251-280 (349)
267 2r8w_A AGR_C_1641P; APC7498, d 45.8 1.3E+02 0.0045 30.1 11.1 95 325-430 62-160 (332)
268 1vrd_A Inosine-5'-monophosphat 45.5 26 0.00088 36.9 5.9 48 102-149 227-274 (494)
269 3rcm_A TATD family hydrolase; 45.1 74 0.0025 31.2 8.9 102 268-372 17-134 (287)
270 1jub_A Dihydroorotate dehydrog 45.1 1.5E+02 0.0052 28.7 11.2 49 353-409 145-195 (311)
271 3iwp_A Copper homeostasis prot 44.8 1.9E+02 0.0066 28.8 11.8 142 269-432 48-209 (287)
272 3ks6_A Glycerophosphoryl diest 44.7 64 0.0022 30.6 8.2 54 354-427 193-246 (250)
273 2yxg_A DHDPS, dihydrodipicolin 44.7 1.3E+02 0.0046 29.3 10.7 95 325-430 28-126 (289)
274 4af0_A Inosine-5'-monophosphat 44.7 21 0.00071 38.9 5.1 51 99-149 268-318 (556)
275 1vr6_A Phospho-2-dehydro-3-deo 44.7 2.7E+02 0.0093 28.4 13.5 110 271-405 124-246 (350)
276 1f6k_A N-acetylneuraminate lya 44.6 1.3E+02 0.0043 29.5 10.5 96 324-430 30-130 (293)
277 2v9d_A YAGE; dihydrodipicolini 44.5 1.1E+02 0.0036 31.0 10.1 96 325-430 59-157 (343)
278 2y88_A Phosphoribosyl isomeras 44.5 32 0.0011 32.1 5.9 63 273-341 37-107 (244)
279 1mdl_A Mandelate racemase; iso 44.3 48 0.0016 33.2 7.5 56 308-371 240-297 (359)
280 3l21_A DHDPS, dihydrodipicolin 44.3 91 0.0031 30.8 9.4 96 325-430 43-141 (304)
281 3tak_A DHDPS, dihydrodipicolin 44.3 1.4E+02 0.005 29.0 10.9 95 325-430 29-127 (291)
282 2nuw_A 2-keto-3-deoxygluconate 44.0 2.2E+02 0.0076 27.7 12.2 96 271-371 24-129 (288)
283 3q94_A Fructose-bisphosphate a 43.9 98 0.0033 30.8 9.5 120 306-429 78-205 (288)
284 3cpr_A Dihydrodipicolinate syn 43.8 1.4E+02 0.0047 29.5 10.6 95 325-430 44-142 (304)
285 1xky_A Dihydrodipicolinate syn 43.8 1.2E+02 0.0042 29.8 10.3 95 325-430 40-138 (301)
286 1h1n_A Endo type cellulase ENG 43.7 30 0.001 33.7 5.7 52 113-167 33-94 (305)
287 3oix_A Putative dihydroorotate 43.3 2.1E+02 0.0071 29.0 12.1 129 267-408 140-306 (345)
288 3jr2_A Hexulose-6-phosphate sy 43.0 1.3E+02 0.0045 27.8 9.9 132 270-426 22-163 (218)
289 1ujp_A Tryptophan synthase alp 43.0 67 0.0023 31.4 8.1 117 272-406 111-229 (271)
290 1rqb_A Transcarboxylase 5S sub 42.9 3.1E+02 0.011 29.6 14.0 150 264-429 43-217 (539)
291 2vef_A Dihydropteroate synthas 42.8 63 0.0022 32.5 8.1 70 98-170 7-97 (314)
292 2g0w_A LMO2234 protein; putati 42.6 1.4E+02 0.0048 28.4 10.3 38 271-308 40-83 (296)
293 1vs1_A 3-deoxy-7-phosphoheptul 42.5 2.6E+02 0.0087 27.5 13.7 124 271-419 56-194 (276)
294 3b0p_A TRNA-dihydrouridine syn 42.5 1.7E+02 0.0058 29.4 11.3 121 271-406 74-225 (350)
295 2nx9_A Oxaloacetate decarboxyl 42.4 3.3E+02 0.011 28.7 14.8 152 264-429 26-200 (464)
296 3ih1_A Methylisocitrate lyase; 42.4 1.2E+02 0.004 30.5 9.9 109 293-429 145-261 (305)
297 1qop_A Tryptophan synthase alp 42.3 2.4E+02 0.0081 27.0 12.4 54 307-370 93-152 (268)
298 3h43_A Proteasome-activating n 42.3 86 0.0029 25.5 7.4 58 165-229 14-74 (85)
299 1qpo_A Quinolinate acid phosph 42.2 36 0.0012 33.9 6.0 64 270-338 204-270 (284)
300 3gka_A N-ethylmaleimide reduct 42.1 2.3E+02 0.0079 28.8 12.3 25 264-288 150-182 (361)
301 1w3i_A EDA, 2-keto-3-deoxy glu 42.0 1E+02 0.0036 30.1 9.4 96 271-371 24-129 (293)
302 3lmz_A Putative sugar isomeras 41.8 1.3E+02 0.0044 27.9 9.7 88 271-370 34-131 (257)
303 2vc6_A MOSA, dihydrodipicolina 41.7 1.1E+02 0.0037 29.9 9.5 95 325-430 28-126 (292)
304 3ffs_A Inosine-5-monophosphate 41.6 25 0.00086 36.7 5.0 43 105-149 139-181 (400)
305 2rfg_A Dihydrodipicolinate syn 41.3 1.2E+02 0.0043 29.7 9.9 95 325-430 28-126 (297)
306 3zwt_A Dihydroorotate dehydrog 41.2 63 0.0022 33.1 7.9 99 263-366 229-354 (367)
307 1eye_A DHPS 1, dihydropteroate 41.1 46 0.0016 33.0 6.6 52 115-170 33-92 (280)
308 1tx2_A DHPS, dihydropteroate s 41.0 63 0.0022 32.3 7.7 53 115-170 67-127 (297)
309 1rd5_A Tryptophan synthase alp 40.9 1.3E+02 0.0043 28.6 9.6 114 276-406 114-230 (262)
310 3iwp_A Copper homeostasis prot 40.9 1.9E+02 0.0066 28.8 11.1 120 271-408 115-240 (287)
311 2d73_A Alpha-glucosidase SUSB; 40.8 1.3E+02 0.0044 33.9 10.8 102 266-370 370-506 (738)
312 4adt_A Pyridoxine biosynthetic 40.8 95 0.0032 31.0 8.9 57 361-428 203-260 (297)
313 2nzl_A Hydroxyacid oxidase 1; 40.7 37 0.0013 35.1 6.1 68 270-341 263-340 (392)
314 3bo9_A Putative nitroalkan dio 40.6 2.8E+02 0.0096 27.4 14.2 145 251-428 23-174 (326)
315 1y0e_A Putative N-acetylmannos 40.5 2.1E+02 0.0073 26.0 14.6 116 263-406 18-146 (223)
316 3sgz_A Hydroxyacid oxidase 2; 40.4 1.8E+02 0.0061 29.7 11.1 95 291-406 205-301 (352)
317 1h5y_A HISF; histidine biosynt 40.4 57 0.0019 30.0 6.9 86 271-368 158-251 (253)
318 3nco_A Endoglucanase fncel5A; 40.3 55 0.0019 31.8 7.1 52 113-167 43-104 (320)
319 2cks_A Endoglucanase E-5; carb 40.2 44 0.0015 32.4 6.3 52 113-167 44-102 (306)
320 3qc0_A Sugar isomerase; TIM ba 40.2 30 0.001 32.2 4.9 100 271-370 22-141 (275)
321 2p10_A MLL9387 protein; putati 39.8 34 0.0012 34.2 5.4 66 331-406 184-259 (286)
322 1o5k_A DHDPS, dihydrodipicolin 39.7 1.2E+02 0.004 30.0 9.4 94 325-429 40-137 (306)
323 1vc4_A Indole-3-glycerol phosp 39.7 49 0.0017 32.0 6.5 65 270-338 164-237 (254)
324 1f76_A Dihydroorotate dehydrog 39.6 51 0.0017 32.7 6.8 74 265-341 222-322 (336)
325 2whl_A Beta-mannanase, baman5; 39.5 34 0.0012 32.9 5.4 53 113-168 33-87 (294)
326 1yxy_A Putative N-acetylmannos 39.4 1.1E+02 0.0037 28.4 8.7 112 263-403 29-157 (234)
327 2ojp_A DHDPS, dihydrodipicolin 39.3 95 0.0032 30.4 8.6 96 325-430 29-127 (292)
328 2qr6_A IMP dehydrogenase/GMP r 39.2 45 0.0015 34.0 6.4 70 271-344 223-313 (393)
329 1ece_A Endocellulase E1; glyco 39.0 32 0.0011 33.9 5.1 52 114-168 47-118 (358)
330 1zzm_A Putative deoxyribonucle 39.0 1.8E+02 0.006 26.9 10.2 100 271-372 23-134 (259)
331 3b4u_A Dihydrodipicolinate syn 38.8 1.3E+02 0.0045 29.4 9.6 94 325-429 31-129 (294)
332 2nzl_A Hydroxyacid oxidase 1; 38.4 1.2E+02 0.004 31.3 9.5 95 292-407 241-337 (392)
333 1gox_A (S)-2-hydroxy-acid oxid 38.1 44 0.0015 34.0 6.1 65 271-339 237-311 (370)
334 3si9_A DHDPS, dihydrodipicolin 37.7 1.6E+02 0.0054 29.3 10.1 95 325-430 50-148 (315)
335 3d0c_A Dihydrodipicolinate syn 37.4 1.4E+02 0.0047 29.7 9.6 94 325-430 40-137 (314)
336 2ovl_A Putative racemase; stru 37.2 48 0.0016 33.4 6.2 56 308-371 242-299 (371)
337 1nu5_A Chloromuconate cycloiso 37.1 60 0.0021 32.5 6.9 56 308-371 239-296 (370)
338 2zbt_A Pyridoxal biosynthesis 37.1 57 0.0019 31.7 6.5 33 393-426 139-171 (297)
339 3fkr_A L-2-keto-3-deoxyarabona 37.0 2E+02 0.0069 28.4 10.7 94 325-430 36-137 (309)
340 3na8_A Putative dihydrodipicol 37.0 1.5E+02 0.0051 29.4 9.8 95 325-430 52-150 (315)
341 1v8a_A Hydroxyethylthiazole ki 36.4 34 0.0012 33.1 4.8 48 321-373 47-94 (265)
342 1rvk_A Isomerase/lactonizing e 36.3 73 0.0025 32.1 7.5 56 308-371 251-309 (382)
343 2q02_A Putative cytoplasmic pr 36.3 2.5E+02 0.0087 25.7 13.0 99 271-370 23-138 (272)
344 3ajx_A 3-hexulose-6-phosphate 36.3 2.4E+02 0.0081 25.3 12.5 129 271-428 17-157 (207)
345 3stp_A Galactonate dehydratase 36.3 52 0.0018 34.1 6.4 65 100-166 167-238 (412)
346 4ab4_A Xenobiotic reductase B; 36.0 3.2E+02 0.011 27.7 12.2 25 264-288 142-174 (362)
347 3cny_A Inositol catabolism pro 36.0 81 0.0028 29.6 7.3 98 271-370 35-159 (301)
348 1ceo_A Cellulase CELC; glycosy 35.8 57 0.002 31.8 6.4 52 112-166 29-90 (343)
349 3k30_A Histamine dehydrogenase 35.8 81 0.0028 34.4 8.2 23 264-286 145-175 (690)
350 1jw9_B Molybdopterin biosynthe 35.7 1.2E+02 0.0043 28.7 8.6 66 296-372 88-153 (249)
351 3vup_A Beta-1,4-mannanase; TIM 35.2 42 0.0014 31.4 5.1 49 114-165 45-110 (351)
352 2jep_A Xyloglucanase; family 5 35.2 77 0.0026 31.8 7.4 54 112-168 70-133 (395)
353 3h8v_A Ubiquitin-like modifier 35.1 1.1E+02 0.0036 30.4 8.2 66 296-371 92-168 (292)
354 1ko7_A HPR kinase/phosphatase; 35.0 43 0.0015 33.7 5.4 87 307-414 48-158 (314)
355 3s1x_A Probable transaldolase; 34.9 52 0.0018 31.7 5.7 66 275-346 120-197 (223)
356 3aof_A Endoglucanase; glycosyl 34.9 57 0.0019 31.4 6.1 52 113-167 35-96 (317)
357 1tkk_A Similar to chloromucona 34.7 74 0.0025 31.8 7.1 46 116-165 147-192 (366)
358 2v5j_A 2,4-dihydroxyhept-2-ENE 34.5 2.2E+02 0.0076 27.9 10.4 87 298-406 30-118 (287)
359 2isw_A Putative fructose-1,6-b 34.5 93 0.0032 31.6 7.7 116 307-429 74-203 (323)
360 1vli_A Spore coat polysacchari 34.3 1.9E+02 0.0066 29.9 10.3 61 325-405 128-191 (385)
361 2nli_A Lactate oxidase; flavoe 34.3 51 0.0017 33.7 5.9 65 271-339 241-315 (368)
362 3r2g_A Inosine 5'-monophosphat 34.0 37 0.0013 34.9 4.8 46 105-150 93-138 (361)
363 3p6l_A Sugar phosphate isomera 34.0 2.8E+02 0.0096 25.4 12.8 88 271-370 26-133 (262)
364 2zbt_A Pyridoxal biosynthesis 34.0 80 0.0027 30.6 7.1 29 100-132 21-49 (297)
365 1ix5_A FKBP; ppiase, isomerase 33.9 32 0.0011 30.7 3.8 57 180-238 64-128 (151)
366 2b7n_A Probable nicotinate-nuc 33.8 63 0.0022 31.7 6.2 63 271-338 193-258 (273)
367 7a3h_A Endoglucanase; hydrolas 33.8 54 0.0018 31.9 5.8 54 111-167 43-102 (303)
368 3r8r_A Transaldolase; pentose 33.7 42 0.0014 32.1 4.8 59 275-339 118-188 (212)
369 3tsm_A IGPS, indole-3-glycerol 33.7 2.4E+02 0.0082 27.6 10.5 103 276-406 88-196 (272)
370 3nl6_A Thiamine biosynthetic b 33.5 4.5E+02 0.015 28.2 13.4 137 272-428 77-231 (540)
371 3sz8_A 2-dehydro-3-deoxyphosph 33.4 1.9E+02 0.0065 28.7 9.7 89 293-406 78-168 (285)
372 2qul_A D-tagatose 3-epimerase; 33.3 1.9E+02 0.0064 26.9 9.4 143 271-420 21-201 (290)
373 1x1o_A Nicotinate-nucleotide p 33.3 62 0.0021 32.2 6.1 64 269-338 205-269 (286)
374 3qvq_A Phosphodiesterase OLEI0 33.2 71 0.0024 30.3 6.4 102 282-423 145-248 (252)
375 3pr9_A FKBP-type peptidyl-prol 33.1 69 0.0024 28.9 6.0 58 180-239 63-128 (157)
376 1k77_A EC1530, hypothetical pr 33.0 2.4E+02 0.0082 25.7 10.0 99 271-370 19-142 (260)
377 1tv5_A Dhodehase, dihydroorota 32.9 64 0.0022 34.0 6.5 97 265-366 308-429 (443)
378 1h4p_A Glucan 1,3-beta-glucosi 32.9 54 0.0018 33.7 5.9 52 113-167 75-136 (408)
379 2dpr_A CON-T(K7GLA); conantoxi 32.9 30 0.001 22.0 2.4 17 137-153 2-18 (26)
380 2gdq_A YITF; mandelate racemas 32.9 1.1E+02 0.0039 30.8 8.2 46 116-165 146-191 (382)
381 1g01_A Endoglucanase; alpha/be 32.8 55 0.0019 32.7 5.8 51 113-167 55-112 (364)
382 3vzx_A Heptaprenylglyceryl pho 32.7 51 0.0017 31.8 5.2 59 322-405 22-81 (228)
383 1zud_1 Adenylyltransferase THI 32.6 1.6E+02 0.0054 28.0 8.8 66 296-372 85-150 (251)
384 1tqx_A D-ribulose-5-phosphate 32.3 2.5E+02 0.0086 26.6 10.1 109 271-405 22-144 (227)
385 1tzz_A Hypothetical protein L1 32.2 81 0.0028 32.0 7.0 45 117-165 173-217 (392)
386 3n9k_A Glucan 1,3-beta-glucosi 31.8 44 0.0015 34.6 4.9 51 113-166 75-134 (399)
387 1zcc_A Glycerophosphodiester p 31.8 2.6E+02 0.0089 26.2 10.2 56 351-426 179-236 (248)
388 4adt_A Pyridoxine biosynthetic 31.5 1.3E+02 0.0045 29.9 8.2 104 291-429 66-174 (297)
389 3ceu_A Thiamine phosphate pyro 31.4 1E+02 0.0034 28.5 6.9 69 269-340 97-175 (210)
390 3fs2_A 2-dehydro-3-deoxyphosph 31.2 1.8E+02 0.0063 29.1 9.2 89 293-406 99-189 (298)
391 2qdd_A Mandelate racemase/muco 31.2 87 0.003 31.5 7.0 60 100-165 134-197 (378)
392 4dbe_A Orotidine 5'-phosphate 31.1 49 0.0017 31.4 4.8 82 270-357 125-207 (222)
393 3pzt_A Endoglucanase; alpha/be 31.0 61 0.0021 32.1 5.7 54 111-167 68-127 (327)
394 1o60_A 2-dehydro-3-deoxyphosph 31.0 2.9E+02 0.01 27.3 10.6 87 294-405 77-166 (292)
395 2xio_A Putative deoxyribonucle 30.8 1.4E+02 0.0047 28.9 8.2 99 272-372 32-147 (301)
396 2qkf_A 3-deoxy-D-manno-octulos 30.7 3.5E+02 0.012 26.5 11.1 104 295-424 75-186 (280)
397 2bti_A Carbon storage regulato 30.5 71 0.0024 25.0 4.7 28 211-239 7-34 (63)
398 1o4u_A Type II quinolic acid p 30.4 33 0.0011 34.2 3.6 65 269-338 202-269 (285)
399 2oz8_A MLL7089 protein; struct 30.4 90 0.0031 31.7 7.0 62 100-165 132-197 (389)
400 2wg5_A General control protein 30.3 2E+02 0.0069 24.3 8.1 31 200-230 61-94 (109)
401 1vpz_A Carbon storage regulato 30.1 70 0.0024 25.8 4.7 31 208-239 14-44 (73)
402 1ypf_A GMP reductase; GUAC, pu 30.1 47 0.0016 33.2 4.7 43 107-149 101-145 (336)
403 3sgz_A Hydroxyacid oxidase 2; 29.9 81 0.0028 32.3 6.5 67 271-341 229-305 (352)
404 1i4n_A Indole-3-glycerol phosp 29.9 35 0.0012 33.3 3.6 83 268-359 158-248 (251)
405 3l5a_A NADH/flavin oxidoreduct 29.8 2.5E+02 0.0085 29.1 10.3 24 264-287 159-190 (419)
406 2osx_A Endoglycoceramidase II; 29.5 64 0.0022 33.6 5.8 51 112-166 66-126 (481)
407 1vhk_A Hypothetical protein YQ 29.5 1.8E+02 0.0062 28.3 8.7 71 211-285 36-111 (268)
408 3dzv_A 4-methyl-5-(beta-hydrox 29.5 59 0.002 32.0 5.2 47 321-372 49-95 (273)
409 3vk5_A MOEO5; TIM barrel, tran 29.4 1.2E+02 0.0042 30.2 7.5 44 321-370 56-101 (286)
410 1vjz_A Endoglucanase; TM1752, 29.3 71 0.0024 31.2 5.8 53 111-166 36-98 (341)
411 1rh9_A Endo-beta-mannanase; en 29.2 1.1E+02 0.0038 30.1 7.3 50 114-166 45-106 (373)
412 1j6o_A TATD-related deoxyribon 29.1 1.8E+02 0.006 27.4 8.4 103 268-372 27-140 (268)
413 3e96_A Dihydrodipicolinate syn 29.1 2.2E+02 0.0074 28.2 9.4 95 325-430 40-137 (316)
414 3jug_A Beta-mannanase; TIM-bar 29.0 51 0.0018 33.3 4.8 51 115-168 58-110 (345)
415 1thf_D HISF protein; thermophI 29.0 1.8E+02 0.0061 27.0 8.4 65 273-342 36-108 (253)
416 3fij_A LIN1909 protein; 11172J 28.3 1.2E+02 0.0042 28.7 7.2 64 302-369 37-112 (254)
417 3n9r_A Fructose-bisphosphate a 28.1 3.5E+02 0.012 27.1 10.7 111 306-425 72-199 (307)
418 1viz_A PCRB protein homolog; s 28.0 72 0.0025 30.8 5.4 57 101-161 8-66 (240)
419 4h3d_A 3-dehydroquinate dehydr 27.9 4.1E+02 0.014 25.5 12.9 141 266-423 30-190 (258)
420 3u3x_A Oxidoreductase; structu 27.9 96 0.0033 30.9 6.6 86 320-428 76-164 (361)
421 1icp_A OPR1, 12-oxophytodienoa 27.8 1.4E+02 0.0048 30.5 7.9 124 265-405 157-329 (376)
422 3sr7_A Isopentenyl-diphosphate 27.7 2.1E+02 0.0073 29.2 9.2 90 293-405 196-306 (365)
423 1o94_A Tmadh, trimethylamine d 27.6 2.4E+02 0.0083 31.0 10.3 23 264-286 138-168 (729)
424 1rvg_A Fructose-1,6-bisphospha 27.5 3E+02 0.01 27.6 10.0 112 293-415 59-182 (305)
425 2qiw_A PEP phosphonomutase; st 27.5 3.3E+02 0.011 26.3 10.2 139 264-406 24-188 (255)
426 3ceu_A Thiamine phosphate pyro 27.4 1.4E+02 0.0047 27.5 7.2 95 270-406 16-114 (210)
427 4dpp_A DHDPS 2, dihydrodipicol 27.4 1.1E+02 0.0037 31.5 6.9 69 271-339 84-163 (360)
428 1zco_A 2-dehydro-3-deoxyphosph 27.3 80 0.0027 30.8 5.7 117 269-405 96-226 (262)
429 1y8q_A Ubiquitin-like 1 activa 27.3 1.6E+02 0.0055 29.6 8.1 64 296-371 93-156 (346)
430 3qfe_A Putative dihydrodipicol 27.2 3.7E+02 0.013 26.6 10.7 95 325-430 39-139 (318)
431 3a5f_A Dihydrodipicolinate syn 27.2 1.4E+02 0.0049 29.1 7.6 91 327-428 31-125 (291)
432 3ijd_A Uncharacterized protein 27.1 97 0.0033 31.3 6.4 99 268-371 166-280 (315)
433 3knb_A Titin; IG-like, titin, 27.1 1.9E+02 0.0066 22.6 7.2 71 176-247 12-89 (100)
434 3lye_A Oxaloacetate acetyl hyd 27.1 3.5E+02 0.012 27.0 10.5 57 109-166 30-96 (307)
435 1uuq_A Mannosyl-oligosaccharid 27.0 1.1E+02 0.0039 31.2 7.1 50 114-166 65-132 (440)
436 2aam_A Hypothetical protein TM 27.0 2.3E+02 0.008 28.2 9.2 93 273-371 128-246 (309)
437 4hci_A Cupredoxin 1; structura 26.9 1.2E+02 0.0043 24.2 6.0 41 176-216 27-67 (100)
438 3g0t_A Putative aminotransfera 26.7 85 0.0029 31.1 5.9 50 103-153 374-436 (437)
439 3zs7_A Pyridoxal kinase; trans 26.7 1.3E+02 0.0044 29.4 7.1 128 240-372 35-185 (300)
440 3l12_A Putative glycerophospho 26.6 1.1E+02 0.0038 29.9 6.7 51 354-424 257-307 (313)
441 3l49_A ABC sugar (ribose) tran 26.4 2.5E+02 0.0086 25.7 8.9 39 323-371 53-92 (291)
442 3if2_A Aminotransferase; YP_26 26.4 1E+02 0.0035 30.7 6.5 51 103-154 368-440 (444)
443 3m2t_A Probable dehydrogenase; 26.3 1.2E+02 0.0042 30.0 7.1 58 320-397 56-116 (359)
444 2f23_A Anti-cleavage anti-GREA 26.1 1.4E+02 0.0049 26.6 6.8 85 143-233 58-155 (156)
445 2yyu_A Orotidine 5'-phosphate 26.1 34 0.0012 32.7 2.7 36 392-427 201-236 (246)
446 1nsj_A PRAI, phosphoribosyl an 26.1 95 0.0032 29.1 5.8 68 269-337 11-83 (205)
447 2y5s_A DHPS, dihydropteroate s 25.8 84 0.0029 31.3 5.6 52 115-170 50-109 (294)
448 4ew6_A D-galactose-1-dehydroge 25.7 1.5E+02 0.0052 29.1 7.5 58 320-397 68-129 (330)
449 2gl5_A Putative dehydratase pr 25.7 1.4E+02 0.0048 30.3 7.5 55 308-370 269-325 (410)
450 3u0h_A Xylose isomerase domain 25.6 82 0.0028 29.2 5.3 100 271-370 20-140 (281)
451 1kbi_A Cytochrome B2, L-LCR; f 25.6 82 0.0028 33.7 5.8 68 270-341 354-436 (511)
452 2c0h_A Mannan endo-1,4-beta-ma 25.5 78 0.0027 30.7 5.3 49 114-165 48-111 (353)
453 1v5x_A PRA isomerase, phosphor 25.1 1E+02 0.0034 28.9 5.7 68 269-337 10-82 (203)
454 3aty_A Tcoye, prostaglandin F2 25.0 5.4E+02 0.018 26.1 11.7 56 331-406 280-336 (379)
455 2zds_A Putative DNA-binding pr 25.0 2.1E+02 0.0071 27.3 8.2 146 271-422 19-228 (340)
456 3a24_A Alpha-galactosidase; gl 24.9 1.9E+02 0.0064 32.1 8.6 92 266-370 308-423 (641)
457 1bqc_A Protein (beta-mannanase 24.9 63 0.0022 31.1 4.4 49 115-167 36-87 (302)
458 2jpp_A Translational repressor 24.9 99 0.0034 24.7 4.7 27 212-239 6-32 (70)
459 3ble_A Citramalate synthase fr 24.8 5.2E+02 0.018 25.6 14.9 134 272-423 101-265 (337)
460 4djd_C C/Fe-SP, corrinoid/iron 24.7 1.6E+02 0.0055 31.2 7.8 123 268-406 163-294 (446)
461 2poz_A Putative dehydratase; o 24.5 95 0.0032 31.5 5.9 55 308-370 250-306 (392)
462 3qr3_A Endoglucanase EG-II; TI 24.4 53 0.0018 33.1 3.9 53 113-168 45-107 (340)
463 4dwd_A Mandelate racemase/muco 24.4 1.8E+02 0.006 29.8 7.9 62 100-165 125-198 (393)
464 2og9_A Mandelate racemase/muco 24.2 1.1E+02 0.0037 31.1 6.3 62 100-165 148-214 (393)
465 1wky_A Endo-beta-1,4-mannanase 23.9 65 0.0022 33.7 4.6 53 113-168 41-95 (464)
466 2e6f_A Dihydroorotate dehydrog 23.8 4.9E+02 0.017 25.0 11.5 47 355-409 149-198 (314)
467 2r91_A 2-keto-3-deoxy-(6-phosp 23.8 3.4E+02 0.011 26.3 9.5 92 325-430 26-122 (286)
468 3o1n_A 3-dehydroquinate dehydr 23.8 5.1E+02 0.017 25.2 11.9 143 266-428 117-275 (276)
469 3hgj_A Chromate reductase; TIM 23.8 2.5E+02 0.0086 28.0 8.8 71 266-342 237-323 (349)
470 1p4c_A L(+)-mandelate dehydrog 23.8 2.4E+02 0.0081 28.7 8.7 93 292-407 214-308 (380)
471 2ox4_A Putative mandelate race 23.7 1.6E+02 0.0054 29.9 7.4 55 308-370 260-316 (403)
472 2y1h_A Putative deoxyribonucle 23.6 1E+02 0.0035 28.9 5.6 100 272-372 25-146 (272)
473 3pzs_A PM kinase, pyridoxamine 23.6 3.1E+02 0.01 26.2 9.2 110 262-372 54-184 (289)
474 3g7q_A Valine-pyruvate aminotr 23.6 1.3E+02 0.0044 29.4 6.6 50 103-153 342-412 (417)
475 1o66_A 3-methyl-2-oxobutanoate 23.5 1.5E+02 0.005 29.5 6.8 73 331-407 38-116 (275)
476 3glc_A Aldolase LSRF; TIM barr 23.5 85 0.0029 31.3 5.1 65 272-343 194-263 (295)
477 3v5n_A Oxidoreductase; structu 23.5 91 0.0031 31.8 5.5 86 319-428 92-185 (417)
478 2ftp_A Hydroxymethylglutaryl-C 23.5 3.8E+02 0.013 26.1 9.9 137 269-422 85-260 (302)
479 3qho_A Endoglucanase, 458AA lo 23.5 86 0.0029 32.9 5.4 51 114-167 87-156 (458)
480 3h5d_A DHDPS, dihydrodipicolin 23.4 2.3E+02 0.008 28.0 8.4 95 325-430 35-134 (311)
481 2jbm_A Nicotinate-nucleotide p 23.3 1.1E+02 0.0037 30.5 5.9 63 271-338 208-273 (299)
482 4hty_A Cellulase; (alpha/beta) 23.2 81 0.0028 31.4 5.0 54 112-168 86-144 (359)
483 3eb2_A Putative dihydrodipicol 23.2 2.2E+02 0.0074 28.0 8.1 95 325-430 32-130 (300)
484 2p4v_A Transcription elongatio 23.2 99 0.0034 27.9 5.1 85 143-233 58-154 (158)
485 1p0k_A Isopentenyl-diphosphate 23.2 5.3E+02 0.018 25.4 11.1 121 274-407 80-210 (349)
486 1xi3_A Thiamine phosphate pyro 23.1 2E+02 0.0069 25.7 7.3 49 113-164 28-76 (215)
487 3prb_A FKBP-type peptidyl-prol 23.0 1.4E+02 0.0049 28.6 6.5 58 180-239 63-128 (231)
488 2o56_A Putative mandelate race 23.0 1.6E+02 0.0056 29.8 7.3 55 308-370 266-322 (407)
489 1bxb_A Xylose isomerase; xylos 23.0 5.7E+02 0.019 25.4 11.6 145 271-422 37-234 (387)
490 3tr9_A Dihydropteroate synthas 22.9 5.7E+02 0.019 25.6 11.1 136 273-428 55-224 (314)
491 4f3y_A DHPR, dihydrodipicolina 22.8 3.4E+02 0.011 26.4 9.3 69 321-411 64-132 (272)
492 4dpp_A DHDPS 2, dihydrodipicol 22.8 1.9E+02 0.0066 29.5 7.8 87 331-427 94-182 (360)
493 1kzl_A Riboflavin synthase; bi 22.8 1.6E+02 0.0054 28.0 6.6 54 201-256 25-85 (208)
494 1i4n_A Indole-3-glycerol phosp 22.8 4.7E+02 0.016 25.2 10.2 127 273-423 116-247 (251)
495 3no3_A Glycerophosphodiester p 22.7 1.3E+02 0.0045 28.2 6.1 50 355-424 186-235 (238)
496 3guw_A Uncharacterized protein 22.7 76 0.0026 30.7 4.5 38 335-372 93-130 (261)
497 3tr9_A Dihydropteroate synthas 22.6 74 0.0025 32.1 4.5 53 115-170 53-117 (314)
498 3tml_A 2-dehydro-3-deoxyphosph 22.6 4E+02 0.014 26.4 9.8 83 293-400 75-159 (288)
499 3hpd_A Hydroxyethylthiazole ki 22.6 82 0.0028 30.9 4.7 45 321-370 47-91 (265)
500 3sjn_A Mandelate racemase/muco 22.5 1.4E+02 0.0047 30.2 6.6 55 308-370 245-301 (374)
No 1
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ...
Probab=100.00 E-value=4.2e-125 Score=1016.07 Aligned_cols=425 Identities=37% Similarity=0.577 Sum_probs=399.1
Q ss_pred hhhhccCCCCCCCCCCccCCCCCCCCeEEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHhh-
Q 010211 75 LSSIFELPNGQCTPGKGVVGPNARRKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQ- 153 (515)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~r~TKIi~TiGPss~~~e~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~~~~~- 153 (515)
++|+..|. +.+++..+|||||||||||+|+++|+|++|+++||||||||||||++|+|+++|++||+++++
T Consensus 46 l~~~~~l~--------~~~~~~~~rkTKIV~TiGPas~~~e~l~~Li~aGmnv~RlNfSHG~~e~h~~~i~~iR~a~~~~ 117 (550)
T 3gr4_A 46 LEHMCRLD--------IDSPPITARNTGIICTIGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTATESF 117 (550)
T ss_dssp HHHHHTCC--------TTSCCCSCCCSEEEEECSTTTCSHHHHHHHHHHTCCEEEEETTSSCHHHHHHHHHHHHHHHHTT
T ss_pred HHHhhccC--------CCCCCccCCCceEEEeeCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHhh
Confidence 66666665 566677899999999999999999999999999999999999999999999999999999998
Q ss_pred -----cCCceEEEEEecCCCeeeeeccCC----cEEEecCCEEEEEeecC---CCCcceEEecccccccccCcCCEEEEe
Q 010211 154 -----FEDKAVAIMLDTKGPEVRSGDVPQ----PIILKEGQEFNFTIKRG---VSTEDTVSVNYDDFVNDVEVGDILLVD 221 (515)
Q Consensus 154 -----~~~~~i~I~lDL~GPkIRtG~l~~----~i~L~~G~~v~lt~~~~---~~~~~~i~v~~~~l~~~v~~Gd~IliD 221 (515)
++ +||+||+||||||||||.+++ +++|++||+|+|+.+.. .++.+.|+++|++|+++|++||+||+|
T Consensus 118 ~~~~~~~-~~vaIllDlkGPkIR~G~~~~~~~~~v~L~~G~~~~lt~~~~~~~~g~~~~i~v~y~~l~~~v~~Gd~Ilid 196 (550)
T 3gr4_A 118 ASDPILY-RPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVD 196 (550)
T ss_dssp TTCTTTC-CCCEEEEECCCSCCBBCCBTTBTTCCEEECTTCEEEEECCGGGTTCBCSSEEEBSCTTHHHHCCTTCEEEET
T ss_pred ccccccC-ceEEEEEeCCCCEEEEEecCCCCCCCeEEcCCCEEEEEeCCcccCCCCccEEecchHHHHhhcCCCCEEEEe
Confidence 77 999999999999999999953 79999999999998753 577889999999999999999999999
Q ss_pred CCeeEEEEEEEeCCeEEEEEeeCcEeccCceeeeCCCccCCCCCCHhhHHHhhcchhcCCcEEEecccCCHHHHHHHHHH
Q 010211 222 GGMMSLAVKSKTKDLVKCIVVDGGELKSRRHLNVRGKSANLPSITDKDWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDY 301 (515)
Q Consensus 222 DG~I~l~V~~~~~~~v~~~V~~gG~L~s~KgVnlpg~~~~lp~ltekD~~dI~~al~~gvD~ValSfVrsa~dv~~vr~~ 301 (515)
||+|.|+|++++++.+.|+|++||.|+++||||+||+.+++|.||+||++||+|++++|+|||++|||++++|+.+++++
T Consensus 197 DG~i~l~V~~v~~~~v~~~V~~gG~L~s~KgvNlPg~~l~lpalTekD~~dl~f~~~~~vD~ia~SfVr~a~Dv~~~r~~ 276 (550)
T 3gr4_A 197 DGLISLQVKQKGADFLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFIRKASDVHEVRKV 276 (550)
T ss_dssp TTTEEEEEEEECSSEEEEEEEECEEECSSCBEECTTSCCCCCSSCHHHHHHHHHHHHTTCSEEEETTCCSHHHHHHHHHH
T ss_pred CCEEEEEEEEEeCCEEEEEEEeCcEEcCCceeecCCCccCCCCCCHHHHHHHHHHHHcCCCEEEecCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCceEEEEecChhhhhcHHHHHhhcCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccC
Q 010211 302 LKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDH 381 (515)
Q Consensus 302 l~~~~~~i~IIaKIEt~~aveNldeIl~~sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~ 381 (515)
|++.|.++.||+||||++||+|+|||++++|||||||||||+|+|+++|+.+||+|+++|+++|||||+||||||||+.+
T Consensus 277 L~~~g~~i~IIAKIE~~eav~nldeIl~~sDgImVaRGDLgvei~~e~vp~~Qk~iI~~c~~agkpVi~ATQMLeSMi~~ 356 (550)
T 3gr4_A 277 LGEKGKNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIEIPAEKVFLAQKMMIGRCNRAGKPVICATQMLESMIKK 356 (550)
T ss_dssp HTTTTTTSEEEEEECSHHHHHTHHHHHHHSSEEEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSTTGGGGTC
T ss_pred HHhcCCCceEEEEeCCHHHHHHHHHHHHhCCEEEEccchhcccCCHHHHHHHHHHHHHHHHHhCCCEEEEehhhHHhhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcChHHHhHHHHHHHhCCcEEeecccccCCCCHHHHHHHHHHHHHHHhcCCCCC----------CCCCCHHHHHHHHhH
Q 010211 382 PTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPVS----------ITPPTQFSAHKNRIH 451 (515)
Q Consensus 382 ~~PtrAEv~DvanaV~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~~----------~~~~~~~~~ia~~a~ 451 (515)
|+|||||++||||||+||+|++|||+|||.|+||+|||++|++||+++|+.++|. ..+.+..++++.+++
T Consensus 357 p~PTRAEvsDVanAvldG~DavMLSgETA~G~yPveaV~~M~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~ 436 (550)
T 3gr4_A 357 PRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQHLIAREAEAAIYHLQLFEELRRLAPITSDPTEATAVGAV 436 (550)
T ss_dssp SSCCHHHHHHHHHHHHHTCSEEEESHHHHTCSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHSCCCCCHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHcCCcEEEEecCccCCCCHHHHHHHHHHHHHHHhhcchhHHHHHhhhhccCCCCChHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999886542 223467778877654
Q ss_pred ---------HhhccCCChHHHHHHHhcCCCCeEEEEeCCHHHHHhcccccceEEEEcCCc--cchhhh
Q 010211 452 ---------GSNFKSLSAFINNLCLHKSLWHEIFVSLAERELSRDWCFIKVSCPYICSFQ--MTWRRH 508 (515)
Q Consensus 452 ---------a~~v~t~sG~tA~~iS~~RP~~pIiavT~~~~~ar~l~L~~GV~p~~~~~~--~~w~~~ 508 (515)
++.++|.||+||+++|||||.|||||+|++++++|||+|+|||+|++++.. .+|..+
T Consensus 437 ~~A~~l~a~aIv~~T~SG~TA~~iSr~RP~~PIia~T~~~~~aR~l~L~~GV~P~~~~~~~~~~~~~~ 504 (550)
T 3gr4_A 437 EASFKCCSGAIIVLTKSGRSAHQVARYRPRAPIIAVTRNPQTARQAHLYRGIFPVLCKDPVQEAWAED 504 (550)
T ss_dssp HHHHHTTCSCEEEECSSSHHHHHHHTTCCSSCEEEEESCHHHHHHGGGSTTEEEEECCSCCCSSHHHH
T ss_pred HHHHhcCCCEEEEECCCcHHHHHHHhhCCCCCEEEEcCCHHHHHHHhccCCeEEEEecccccccccCC
Confidence 245799999999999999999999999999999999999999999999753 457654
No 2
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1e-124 Score=1007.58 Aligned_cols=408 Identities=33% Similarity=0.495 Sum_probs=377.1
Q ss_pred CCCCCeEEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHh-hcCCceEEEEEecCCCeeeeec
Q 010211 96 NARRKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNS-QFEDKAVAIMLDTKGPEVRSGD 174 (515)
Q Consensus 96 ~~~r~TKIi~TiGPss~~~e~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~~~~-~~~~~~i~I~lDL~GPkIRtG~ 174 (515)
..+|||||||||||+|+++|+|++|+++||||||||||||++|+|+++|+++|++++ +++ +||+||+||||||||||.
T Consensus 43 ~~~rkTKIV~TiGPas~s~e~l~~Li~aGmnv~RlNfSHG~~e~h~~~i~~iR~~~~~~~~-~~vaIllDl~GPkIR~G~ 121 (520)
T 3khd_A 43 LRSKKTHIVCTLGPACKSVETLVKLIDAGMDICRFNFSHGSHEDHKEMFNNVLKAQELRPN-CLLGMLLDTKGPEIRTGF 121 (520)
T ss_dssp GGGCSSEEEEECCGGGCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHCSS-CCCEEEEECCCCCEEBCE
T ss_pred ccCCCcEEEEeeCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHhcC-CceEEEEeCCCCeEEeec
Confidence 468999999999999999999999999999999999999999999999999999999 777 999999999999999999
Q ss_pred cCC-cEEEecCCEEEEEee-cCCCCcceEEecccccccccCcCCEEEEeCCeeEEEEEEEeCCeEEEEEeeCcEeccCce
Q 010211 175 VPQ-PIILKEGQEFNFTIK-RGVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTKDLVKCIVVDGGELKSRRH 252 (515)
Q Consensus 175 l~~-~i~L~~G~~v~lt~~-~~~~~~~~i~v~~~~l~~~v~~Gd~IliDDG~I~l~V~~~~~~~v~~~V~~gG~L~s~Kg 252 (515)
+++ +++|++||+|+|+.+ ...++.+.|+++|++|+++|++||+||+|||+|.|+|++++++.++|+|++||.|+++||
T Consensus 122 ~~~~~~~L~~G~~~~lt~~~~~~g~~~~i~v~y~~l~~~v~~G~~IlidDG~i~l~V~~~~~~~v~~~V~~gG~L~~~Kg 201 (520)
T 3khd_A 122 LKNKEVHLKEGSKLKLVTDYEFLGDETCIACSYKKLPQSVKPGNIILIADGSVSCKVLETHEDHVITEVLNSAVIGERKN 201 (520)
T ss_dssp EC-----------CEEESCTTCEECTTEEEBSCTTHHHHCCC-CEEEETTTTEEEEEEEECSSCEEEEECC-CCCCSSCE
T ss_pred cCCCCeEecCCCEEEEecCCCcCCCccEEecccHHHHhhcCcCcEEEEeCCEEEEEEEEEECCEEEEEEEeCeEEeCCce
Confidence 964 579999999999987 556788899999999999999999999999999999999999999999999999999999
Q ss_pred eeeCCCccCCCCCCHhhHHHh-hcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhhc
Q 010211 253 LNVRGKSANLPSITDKDWEDI-KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISAS 331 (515)
Q Consensus 253 Vnlpg~~~~lp~ltekD~~dI-~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~s 331 (515)
||+||+.+++|.||+||++|| +|++++|+|||++|||++++|+.++++++++.|.++.|||||||++||+|+|||++++
T Consensus 202 vNlPg~~~~lp~lTekD~~dl~~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l~~~g~~i~IIAKIE~~eav~nldeIl~~s 281 (520)
T 3khd_A 202 MNLPNVKVDLPIISEKDKNDILNFAIPMGCNFIAASFIQSADDVRLIRNLLGPRGRHIKIIPKIENIEGIIHFDKILAES 281 (520)
T ss_dssp EECTTSCCCSCSSCHHHHHHHHHTHHHHTCCEEEETTCCSHHHHHHHHHHHTTTTTTSEEEEEECSHHHHHTHHHHHHHS
T ss_pred eecCCCcCCCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHhcCCCCcEEEEECCHHHHHhHHHHHHhC
Confidence 999999999999999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecccccC
Q 010211 332 DGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAH 411 (515)
Q Consensus 332 DgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ETa~ 411 (515)
|||||||||||+|+|+++|+.+||+|+++|+++|||||+||||||||+.+|+|||||++||||||+||+|++|||+|||.
T Consensus 282 DGIMVARGDLgvEi~~e~vp~~Qk~iI~~c~~aGKPVi~ATQMLeSMi~~p~PTRAEvsDVanAVldGaDavMLSgETA~ 361 (520)
T 3khd_A 282 DGIMIARGDLGMEISPEKVFLAQKLMISKCNLQGKPIITATQMLESMTKNPRPTRAEVTDVANAVLDGTDCVMLSGETAG 361 (520)
T ss_dssp SCEEECHHHHTTTSCGGGHHHHHHHHHHHHHHHTCCEEECCCCCGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHS
T ss_pred CcEEEccccccccCCHHHHHHHHHHHHHHHHHcCCCeEEeehhhHHHhcCCCccHHHHHHHHHHHHhCCCEEEecccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCCCC----------CCCCCHHHHHHHHhH---------HhhccCCChHHHHHHHhcCCC
Q 010211 412 GKFPLKAVKVMHTVALRTESSLPVS----------ITPPTQFSAHKNRIH---------GSNFKSLSAFINNLCLHKSLW 472 (515)
Q Consensus 412 G~yPveaV~~m~~I~~~aE~~~~~~----------~~~~~~~~~ia~~a~---------a~~v~t~sG~tA~~iS~~RP~ 472 (515)
|+||+|||++|++||+++|+.++|. ..+.+..++++.+++ ++.++|.||+||+++|||||.
T Consensus 362 G~yPveaV~~M~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~A~~l~a~aIv~~T~SG~TA~~vSr~RP~ 441 (520)
T 3khd_A 362 GKFPVEAVTIMSKICLEAEACIDYKLLYQSLVNAIETPISVQEAVARSAVETAESIQASLIIALTETGYTARLIAKYKPS 441 (520)
T ss_dssp CSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHHHTTCSEEEEECSSSHHHHHHHHTCCS
T ss_pred CcCHHHHHHHHHHHHHHHHhhhhhhhhHhhhhhccCCCCCHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHhcCCC
Confidence 9999999999999999999987642 123467788877655 245799999999999999999
Q ss_pred CeEEEEeCCHHHHHhcccccceEEEEcCCccc
Q 010211 473 HEIFVSLAERELSRDWCFIKVSCPYICSFQMT 504 (515)
Q Consensus 473 ~pIiavT~~~~~ar~l~L~~GV~p~~~~~~~~ 504 (515)
+||||+|++++++|||+|+|||+|++++...+
T Consensus 442 ~PIia~T~~~~~~r~l~L~~GV~p~~~~~~~~ 473 (520)
T 3khd_A 442 CTILALSASDSTVKCLNVHRGVTCIKVGSFQG 473 (520)
T ss_dssp SEEEEEESCHHHHHHGGGSTTEEEEECCSCCC
T ss_pred CCEEEEcCCHHHHHHHhccCCeEEEEeCCCCC
Confidence 99999999999999999999999999975443
No 3
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3srk_A* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A*
Probab=100.00 E-value=4.9e-124 Score=1000.22 Aligned_cols=406 Identities=36% Similarity=0.543 Sum_probs=386.1
Q ss_pred CCCCCCCeEEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHhhcCCceEEEEEecCCCeeeee
Q 010211 94 GPNARRKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVRSG 173 (515)
Q Consensus 94 ~~~~~r~TKIi~TiGPss~~~e~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~~~~~~~~~~i~I~lDL~GPkIRtG 173 (515)
++..+|||||||||||+|+++|+|++|+++||||||||||||++|+|+++|+++|++++++| +||+||+||||||||||
T Consensus 15 ~~~~~rkTKIv~TiGPas~~~e~l~~Li~aGmnv~RlNfSHG~~e~h~~~i~~iR~~~~~~g-~~vaIl~Dl~GPkIR~g 93 (499)
T 3hqn_D 15 PVANYRAARIICTIGPSTQSVEALKGLIQSGMSVARMNFSHGSHEYHQTTINNVRQAAAELG-VNIAIALDTKGPEIRTG 93 (499)
T ss_dssp CCCSSCCSEEEEECSTTTCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHHT-CCCEEEEECCCCCCBBC
T ss_pred CcccCCCeEEEEEECCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHhC-CcEEEEEeCCCCEEeee
Confidence 55678999999999999999999999999999999999999999999999999999999998 99999999999999999
Q ss_pred ccCC--cEEEecCCEEEEEeec---CCCCcceEEecccccccccCcCCEEEEeCCeeEEEEEEEe-CCeEEEEEeeCcEe
Q 010211 174 DVPQ--PIILKEGQEFNFTIKR---GVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKT-KDLVKCIVVDGGEL 247 (515)
Q Consensus 174 ~l~~--~i~L~~G~~v~lt~~~---~~~~~~~i~v~~~~l~~~v~~Gd~IliDDG~I~l~V~~~~-~~~v~~~V~~gG~L 247 (515)
.+++ ++ |++||+|+|+.+. ..++.+.++++|++|+++|++||.||+|||+|.|+|++++ ++.++|+|++||.|
T Consensus 94 ~~~~~~~v-L~~G~~~~lt~~~~~~~~g~~~~i~v~y~~l~~~v~~G~~ilidDG~i~l~V~~~~~~~~i~~~v~~gG~L 172 (499)
T 3hqn_D 94 QFVGGDAV-MERGATCYVTTDPAFADKGTKDKFYIDYQNLSKVVRPGNYIYIDDGILILQVQSHEDEQTLECTVTNSHTI 172 (499)
T ss_dssp CBGGGEEE-ECTTCEEEEECCGGGTTCBCSSEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEEEETTEEEEEECSCEEE
T ss_pred ccCCCCeE-EcCCCEEEEEecCcccCCCCCCEEecchHHHHhhcCCCCEEEEeCCEEEEEEEEEcCCCeEEEEEEeCcEe
Confidence 9965 57 9999999999873 4678889999999999999999999999999999999998 67899999999999
Q ss_pred ccCceeeeCCCccCCCCCCHhhHHHhhcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHH
Q 010211 248 KSRRHLNVRGKSANLPSITDKDWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSI 327 (515)
Q Consensus 248 ~s~KgVnlpg~~~~lp~ltekD~~dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeI 327 (515)
+++||||+||+.+++|.||+||++||+|++++|+|+|++|||++++|+.++++++++.|.++.||+||||++||+|+|||
T Consensus 173 ~~~KgvNlPg~~~~lp~ltekD~~dl~~~~~~~vD~i~~sfVr~a~dv~~~r~~l~~~~~~i~IiaKIE~~eav~nldeI 252 (499)
T 3hqn_D 173 SDRRGVNLPGCDVDLPAVSAKDRVDLQFGVEQGVDMIFASFIRSAEQVGDVRKALGPKGRDIMIICKIENHQGVQNIDSI 252 (499)
T ss_dssp ETTCBEECTTSCCCCCSSCHHHHHHHHHHHHTTCSEEEETTCCSHHHHHHHHHHHCGGGTTSEEEEEECSHHHHHTHHHH
T ss_pred eCCCceecCCCCCCCCCCCHHHHHHHHHHHHcCCCEEEecCCCCHHHHHHHHHHHHhcCCCCeEEEEECCHHHHHhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999989999999999999999999999
Q ss_pred HhhcCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecc
Q 010211 328 ISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 407 (515)
Q Consensus 328 l~~sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ 407 (515)
++++|||||||||||+|+|+++|+.+||+|+++|+++|||||+||||||||+++|+|||||++||||||+||+|++|||+
T Consensus 253 l~~sDgImVaRGDLgvEi~~e~vp~~Qk~iI~~c~~agkpVi~ATQmLeSMi~~p~PTRAEvsDVanaV~dG~DavMLSg 332 (499)
T 3hqn_D 253 IEESDGIMVARGDLGVEIPAEKVVVAQKILISKCNVAGKPVICATQMLESMTYNPRPTRAEVSDVANAVFNGADCVMLSG 332 (499)
T ss_dssp HHHSSEEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHHTCCEEEESSSSGGGGTSSSCCHHHHHHHHHHHHHTCSEEEESH
T ss_pred HHhCCcEEEccccccCcCCHHHHHHHHHHHHHHHHHcCCCeEEeehhHHHhccCCCccHHHHHHHHHHHHcCCcEEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCHHHHHHHHHHHHHHHhcCCCCC----------CCCCCHHHHHHHHhH---------HhhccCCChHHHHHHHh
Q 010211 408 ETAHGKFPLKAVKVMHTVALRTESSLPVS----------ITPPTQFSAHKNRIH---------GSNFKSLSAFINNLCLH 468 (515)
Q Consensus 408 ETa~G~yPveaV~~m~~I~~~aE~~~~~~----------~~~~~~~~~ia~~a~---------a~~v~t~sG~tA~~iS~ 468 (515)
|||.|+||+|||++|++||+++|+.++|. ..+.+..++++.+++ ++.++|.||+||+++||
T Consensus 333 ETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~A~~l~a~aIv~~T~SG~tA~~isr 412 (499)
T 3hqn_D 333 ETAKGKYPNEVVQYMARICLEAQSALNEYVFFNSIKKLQHIPMSADEAVCSSAVNSVYETKAKAMVVLSNTGRSARLVAK 412 (499)
T ss_dssp HHHTCSCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHTCCSSCCHHHHHHHHHHHHHHHHTCSEEEEECSSSHHHHHHHH
T ss_pred cccCCCCHHHHHHHHHHHHHHHHhcchhHHHHhhhhhccCCCCCHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHh
Confidence 99999999999999999999999876542 123467788877654 24579999999999999
Q ss_pred cCCCCeEEEEeCCHHHHHhcccccceEEEEcCC
Q 010211 469 KSLWHEIFVSLAERELSRDWCFIKVSCPYICSF 501 (515)
Q Consensus 469 ~RP~~pIiavT~~~~~ar~l~L~~GV~p~~~~~ 501 (515)
|||.+||||+|++++++|||+|+|||+|++++.
T Consensus 413 ~RP~~pIia~T~~~~~~r~l~L~~GV~p~~~~~ 445 (499)
T 3hqn_D 413 YRPNCPIVCVTTRLQTCRQLNITQGVESVFFDA 445 (499)
T ss_dssp TCCSSCEEEEESCHHHHHHGGGSTTEEEEECCH
T ss_pred hCCCCCEEEEcCCHHHHHHhhccCCeEEEEecc
Confidence 999999999999999999999999999999874
No 4
>4drs_A Pyruvate kinase; glycolysis, allosteric EN transferase; 2.50A {Cryptosporidium parvum} PDB: 3ma8_A*
Probab=100.00 E-value=6e-123 Score=997.89 Aligned_cols=410 Identities=37% Similarity=0.548 Sum_probs=385.2
Q ss_pred CCCCCCCeEEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHh-hcCCceEEEEEecCCCeeee
Q 010211 94 GPNARRKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNS-QFEDKAVAIMLDTKGPEVRS 172 (515)
Q Consensus 94 ~~~~~r~TKIi~TiGPss~~~e~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~~~~-~~~~~~i~I~lDL~GPkIRt 172 (515)
+..++|||||||||||+|+++|+|++|+++||||||||||||++++|+++|+++|++++ +.+ +||+||+||+||||||
T Consensus 39 ~~~~~RrTKIv~TlGPas~~~e~l~~Li~aGmnv~RlNfSHg~~e~h~~~i~~iR~~~~~~~~-~~vaIl~Dl~GPkIR~ 117 (526)
T 4drs_A 39 NDVTQRKTQIICTIGPSCNNVESLIGLIDKGMSVARLNFSHGDHESHFKTLQNIREAAKARPH-STVGIMLDTKGPEIRT 117 (526)
T ss_dssp ---CCCCSEEEEECCGGGCSHHHHHHHHHHTCCEEEEETTSSCHHHHHHHHHHHHHHHHTCTT-CCCEEEEECCCSCCBB
T ss_pred CCcccCCceEEEeeCCCcCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHhcCC-CceEEEEECCCCeeEE
Confidence 34568999999999999999999999999999999999999999999999999999987 466 9999999999999999
Q ss_pred eccCC--cEEEecCCEEEEEeec-CCCCcceEEecccccccccCcCCEEEEeCCeeEEEEEEEeCCeEEEEEeeCcEecc
Q 010211 173 GDVPQ--PIILKEGQEFNFTIKR-GVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTKDLVKCIVVDGGELKS 249 (515)
Q Consensus 173 G~l~~--~i~L~~G~~v~lt~~~-~~~~~~~i~v~~~~l~~~v~~Gd~IliDDG~I~l~V~~~~~~~v~~~V~~gG~L~s 249 (515)
|.+++ +++|++||+|+|+.+. ..++.+.|+++|++|+++|++||.||+|||+|.|+|++++++.++|+|++||.|++
T Consensus 118 g~~~~~~~i~L~~G~~v~lt~~~~~~g~~~~i~v~y~~l~~~v~~Gd~IlidDG~i~l~V~~v~~~~i~~~V~~gG~L~~ 197 (526)
T 4drs_A 118 GMLEGGKPIELKAGQTLKITTDYSMLGNSECISCSYSLLPKSVQIGSTVLIADGSLSTQVLEIGDDFIVCKVLNSVTIGE 197 (526)
T ss_dssp CCBSTTCCEECCTTSEEEEESCCSSCBCSSEEEBSCTTSTTTCCTTCEEEETTTTEEEEEEEECSSEEEEECCSCCEECS
T ss_pred EecCCCCeEEecCCCEEEEEeCCccCCCcceeeecchhhHHHhcCCCEEEEeCCCceEEEEEEeCCeEEEEeccCccccc
Confidence 99964 6999999999999874 45778899999999999999999999999999999999999999999999999999
Q ss_pred CceeeeCCCccCCCCCCHhhHHH-hhcchhcCCcEEEecccCCHHHHHHHHHHHHhcC-------CCceEEEEecChhhh
Q 010211 250 RRHLNVRGKSANLPSITDKDWED-IKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCN-------ADIHVIVKIESADSI 321 (515)
Q Consensus 250 ~KgVnlpg~~~~lp~ltekD~~d-I~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~-------~~i~IIaKIEt~~av 321 (515)
+||||+||..+++|.||+||.+| |+||+++|+|||++||||+++||.++|++|++.+ .++.||||||+++|+
T Consensus 198 ~KgvNlP~~~l~lp~lTekD~~D~l~fa~~~~vD~ialSFVr~~~Dv~~~r~~l~~~g~~~~~~~~~i~IiaKIE~~~av 277 (526)
T 4drs_A 198 RKNMNLPGCKVHLPIIGDKDRHDIVDFALKYNLDFIALSFVQNGADVQLCRQIISENTQYSNGIPSSIKIISKIENLEGV 277 (526)
T ss_dssp SCBEECTTCCCCCCSSCHHHHHHHHHTTTTTTCSEEEETTCCSHHHHHHHHHHHHTCCTTTTTCCCCCEEEEEECSHHHH
T ss_pred cccccCCCcccCcccccchhHHHHHHHHHHhccCeeeecccCchhhHHHHHHHHHhhCcccccccccceeeeehhccHHH
Confidence 99999999999999999999998 6899999999999999999999999999999876 368999999999999
Q ss_pred hcHHHHHhhcCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCc
Q 010211 322 PNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGAD 401 (515)
Q Consensus 322 eNldeIl~~sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D 401 (515)
+|||||++++|||||||||||+|+|+|+||.+||+||++|+++|||||+||||||||+.+|+|||||++|+||||+||+|
T Consensus 278 ~NldeIi~~sDgIMVARGDLgvEip~e~vp~~QK~II~~c~~~gKPVI~ATQmLeSMi~np~PTRAEvsDVAnAV~DGaD 357 (526)
T 4drs_A 278 INFDSICSESDGIMVARGDLGMEIPPEKIFVAQKCMISKCNVAGKPVVTATQMLESMIKSNRPTRAEMTDVANAVLDGSD 357 (526)
T ss_dssp HTHHHHHHHSSEEEEECTTHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESCTTGGGGSSSSCCHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHhhccEEEEECCcccccCCHHHHHHHHHHHHHHHHHcCCeEEEhhhhhHHHhhCCCCCCchHHHHHHHHHhCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeecccccCCCCHHHHHHHHHHHHHHHhcCCCCC----------CCCCCHHHHHHHHhH---------HhhccCCChHH
Q 010211 402 AVMLSGETAHGKFPLKAVKVMHTVALRTESSLPVS----------ITPPTQFSAHKNRIH---------GSNFKSLSAFI 462 (515)
Q Consensus 402 ~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~~----------~~~~~~~~~ia~~a~---------a~~v~t~sG~t 462 (515)
++|||+|||.|+||+|||++|++||+++|+.++|. ..+.+..++++.+++ ++.++|.||+|
T Consensus 358 avMLSgETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~A~~l~a~aIv~~T~sG~t 437 (526)
T 4drs_A 358 CVMLSGETANGAFPFDAVNVMSRVCAQAETCIDYPVLYHAIHSSVPKPVAVPEAIACSAVESAHDVNAKLIITITETGNT 437 (526)
T ss_dssp EEEESHHHHSCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHTTCSEEEEECSSSHH
T ss_pred eEEEcchhhcccCHHHHHHHHHHHHHHHhhcccchhhhhhhhhccCCCCCHHHHHHHHHHHHHHhCCCCEEEEECCCcHH
Confidence 99999999999999999999999999999987652 123467888887765 24579999999
Q ss_pred HHHHHhcCCCCeEEEEeCCHHHHHhcccccceEEEEcCCccc
Q 010211 463 NNLCLHKSLWHEIFVSLAERELSRDWCFIKVSCPYICSFQMT 504 (515)
Q Consensus 463 A~~iS~~RP~~pIiavT~~~~~ar~l~L~~GV~p~~~~~~~~ 504 (515)
|+++|||||.+||||+|++++++|||+|+|||+|++++...+
T Consensus 438 A~~iSr~RP~~pI~a~T~~~~~~r~l~L~wGV~p~~~~~~~~ 479 (526)
T 4drs_A 438 ARLISKYRPSQTIIACTAKPEVARGLKIARGVKTYVLNSIHH 479 (526)
T ss_dssp HHHHHHTCCSSEEEEEESCHHHHHHGGGSTTEEEEECSCCCC
T ss_pred HHHHHhhCCCCCEEEECCCHHHHHhhhccCCeEEEEeCCCCC
Confidence 999999999999999999999999999999999999976543
No 5
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A
Probab=100.00 E-value=3.7e-123 Score=994.86 Aligned_cols=407 Identities=34% Similarity=0.525 Sum_probs=385.5
Q ss_pred CCCCeEEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHhhc-CCceEEEEEecCCCeeeeecc
Q 010211 97 ARRKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQF-EDKAVAIMLDTKGPEVRSGDV 175 (515)
Q Consensus 97 ~~r~TKIi~TiGPss~~~e~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~~~~~~-~~~~i~I~lDL~GPkIRtG~l 175 (515)
.+|||||||||||+|+++|+|++|+++||||||||||||++++|+++|+++|++++++ | +||+||+||||||||||.+
T Consensus 34 ~~rkTKIV~TiGPas~~~e~l~~li~aGm~v~RlNfSHg~~e~h~~~i~~iR~~~~~~~~-~~vaIl~Dl~GPkIR~g~~ 112 (511)
T 3gg8_A 34 TAHRTRIVCTMGPACWNVDTLVKMIDAGMNVCRLNFSHGDHETHARTVQNIQEAMKQRPE-ARLAILLDTKGPEIRTGFL 112 (511)
T ss_dssp TTCSSEEEEECCTTTCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHCTT-CCCEEEEECCCCCCBBCC-
T ss_pred ccCccEEEEeeCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHcCC-CceEEEEECCCCEEecccC
Confidence 5799999999999999999999999999999999999999999999999999999998 7 9999999999999999999
Q ss_pred CC--cEEEecCCEEEEEee-cCCCCcceEEecccccccccCcCCEEEEeCCeeEEEEEEEeCCeEEEEEeeCcEeccCce
Q 010211 176 PQ--PIILKEGQEFNFTIK-RGVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTKDLVKCIVVDGGELKSRRH 252 (515)
Q Consensus 176 ~~--~i~L~~G~~v~lt~~-~~~~~~~~i~v~~~~l~~~v~~Gd~IliDDG~I~l~V~~~~~~~v~~~V~~gG~L~s~Kg 252 (515)
.+ +++|++||+|+|+.+ ...++.+.|+++|++|+++|++||.||+|||+|.|+|++++++.++|+|++||.|+++||
T Consensus 113 ~~~~~v~L~~G~~~~lt~~~~~~g~~~~i~v~y~~l~~~v~~Gd~IlidDG~i~l~V~~v~~~~i~~~V~~gG~L~~~Kg 192 (511)
T 3gg8_A 113 KDHKPITLQQGATLKIVTDYNLIGDETTIACSYGALPQSVKPGNTILIADGSLSVKVVEVGSDYVITQAQNTATIGERKN 192 (511)
T ss_dssp ----CEEECTTCEEEEESCTTCCCCSSEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEECSSEEEEEESSCEEECSSCB
T ss_pred CCCCCEEEccCCEEEEEECCCCCCCCCEEEcchHHHHhhcCCCCEEEEECCEEEEEEEEEeCCEEEEEEEeCeEEcCCcc
Confidence 74 799999999999988 566888899999999999999999999999999999999999999999999999999999
Q ss_pred eeeCCCccCCCCCCHhhHHHh-hcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhhc
Q 010211 253 LNVRGKSANLPSITDKDWEDI-KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISAS 331 (515)
Q Consensus 253 Vnlpg~~~~lp~ltekD~~dI-~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~s 331 (515)
||+||+.+++|.||+||++|| +|++++|+|||++|||++++|+.++|++|++.|.++.|||||||++|++|+|||++++
T Consensus 193 vNlPg~~~~lp~lTekD~~Dl~~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l~~~~~~~~iiaKIE~~eav~nldeIl~~s 272 (511)
T 3gg8_A 193 MNLPNVKVQLPVIGEKDKHDILNFGIPMGCNFIAASFVQSADDVRYIRGLLGPRGRHIRIIPKIENVEGLVNFDEILAEA 272 (511)
T ss_dssp EECTTCCCCSCSSCHHHHHHHHHTTTTTTCCEEEETTCCSHHHHHHHHHHHTGGGTTCEEEEEECSHHHHHTHHHHHHHC
T ss_pred eecCCCccCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCCeEEEEECCHHHHHhHHHHHHhC
Confidence 999999999999999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecccccC
Q 010211 332 DGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAH 411 (515)
Q Consensus 332 DgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ETa~ 411 (515)
|||||||||||+|+|+++|+.+||+|+++|+++|||||+||||||||+.+|+|||||++||||||+||+|++|||+|||.
T Consensus 273 DgimVaRGDLgvei~~e~v~~~qk~ii~~~~~~gkpvi~ATQmLeSMi~~p~PTRAEvsDVAnAV~dGaDavMLSgETA~ 352 (511)
T 3gg8_A 273 DGIMIARGDLGMEIPPEKVFLAQKMMIAKCNVVGKPVITATQMLESMIKNPRPTRAEAADVANAVLDGTDCVMLSGETAN 352 (511)
T ss_dssp SCEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHTTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHT
T ss_pred CeEEEecchhcCcCCHHHHHHHHHHHHHHHHHcCCCeEEehHHHHHhhcCCCccHHHHHHHHHHHHhCCCEEEecccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCCCC----------CCCCCHHHHHHHHhH---------HhhccCCChHHHHHHHhcCCC
Q 010211 412 GKFPLKAVKVMHTVALRTESSLPVS----------ITPPTQFSAHKNRIH---------GSNFKSLSAFINNLCLHKSLW 472 (515)
Q Consensus 412 G~yPveaV~~m~~I~~~aE~~~~~~----------~~~~~~~~~ia~~a~---------a~~v~t~sG~tA~~iS~~RP~ 472 (515)
|+||+|||++|++||+++|+.++|. ..+.+..++++.+++ ++.++|.||+||+++|||||.
T Consensus 353 G~yPveaV~~M~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~A~~l~a~aIv~~T~SG~tA~~iSr~RP~ 432 (511)
T 3gg8_A 353 GEFPVITVETMARICYEAETCVDYPALYRAMCLAVPPPISTQEAVARAAVETAECVNAAIILALTETGQTARLIAKYRPM 432 (511)
T ss_dssp CSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHHHHTCSEEEEECSSSHHHHHHHHTCCS
T ss_pred CCCHHHHHHHHHHHHHHHHhchhHHHHHhhhhhcccCCCCHHHHHHHHHHHHHHhcCCCEEEEECCCchHHHHHHhhCCC
Confidence 9999999999999999999986642 123467778877654 245799999999999999999
Q ss_pred CeEEEEeCCHHHHHhcccccceEEEEcCCccc
Q 010211 473 HEIFVSLAERELSRDWCFIKVSCPYICSFQMT 504 (515)
Q Consensus 473 ~pIiavT~~~~~ar~l~L~~GV~p~~~~~~~~ 504 (515)
+||||+|++++++|||+|+|||+|++++...+
T Consensus 433 ~PIia~T~~~~~~r~l~L~~GV~p~~~~~~~~ 464 (511)
T 3gg8_A 433 QPILALSASESTIKHLQVIRGVTTMQVPSFQG 464 (511)
T ss_dssp SCEEEEESCHHHHHHGGGSTTEEEEECCC--C
T ss_pred CCEEEEcCCHHHHHHhhccCCeEEEEeCCCCC
Confidence 99999999999999999999999999976443
No 6
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum}
Probab=100.00 E-value=3.2e-123 Score=984.28 Aligned_cols=400 Identities=27% Similarity=0.441 Sum_probs=385.0
Q ss_pred CCCCeEEEEecCCCCCCHH--HHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHhhcCCceEEEEEecCCCeeeeec
Q 010211 97 ARRKTKIVCTIGPSTSSRE--MIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVRSGD 174 (515)
Q Consensus 97 ~~r~TKIi~TiGPss~~~e--~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~~~~~~~~~~i~I~lDL~GPkIRtG~ 174 (515)
.+|||||||||||+|+++| +|++|+++ |||||||||||++++|+++|+++|++++++| +|++||+||||||||||.
T Consensus 13 ~~r~TKIv~TiGPas~~~e~~~l~~li~a-mnv~RlNfSHg~~e~h~~~i~~iR~~~~~~g-~~vaIl~Dl~GPkIR~g~ 90 (461)
T 3qtg_A 13 ARNLTKRVATLGPSTDVLRPDELIKFLDL-VDGVRINLAHASPNEVKFRIEAVRSYEKAKN-RPLAVIVDLKGPSIRVGS 90 (461)
T ss_dssp CSCSSEEEEECSHHHHTCCHHHHHHHHTT-CSEEEEETTTCCHHHHHHHHHHHHHHHHHHT-CCCEEEEECCCCCCBCCB
T ss_pred ccCCceEEEeeCCCccCchHHHHHHHHHh-CCEEEEECCCCCHHHHHHHHHHHHHHHHHcC-CceEEEEeCCCCEEEECC
Confidence 5799999999999999999 99999999 9999999999999999999999999999998 999999999999999999
Q ss_pred cCCcEEEecCCEEEEEeecCCCCcceEEecccccccccCcCCEEEEeCCeeEEEEEEEeCCeEEEEEeeCcEeccCceee
Q 010211 175 VPQPIILKEGQEFNFTIKRGVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTKDLVKCIVVDGGELKSRRHLN 254 (515)
Q Consensus 175 l~~~i~L~~G~~v~lt~~~~~~~~~~i~v~~~~l~~~v~~Gd~IliDDG~I~l~V~~~~~~~v~~~V~~gG~L~s~KgVn 254 (515)
+. +++|++||+|+|+.++..++ +.++++|++|+++|++||.||+|||+|.|+|++++++.++|+|++||.|+++||||
T Consensus 91 ~~-~v~L~~G~~~~lt~~~~~~~-~~i~v~y~~l~~~v~~G~~IlidDG~i~l~V~~~~~~~v~~~V~~gG~L~~~KgvN 168 (461)
T 3qtg_A 91 TS-PINVQEGEVVKFKLSDKSDG-TYIPVPNKAFFSAVEQNDVILMLDGRLRLKVTNTGSDWIEAVAESSGVITGGKAIV 168 (461)
T ss_dssp CS-CEEECTTCEEEEEECSBCCS-SSEEECCHHHHHHCCTTCEEEEGGGTEEEEEEEECSSEEEEEESSCEEECTTCBEE
T ss_pred CC-CEEEeCCCEEEEEecCCCCC-cEEEcchHHHHhhcCCCCEEEEeCCEEEEEEEEEECCEEEEEEEECCEecCCCcee
Confidence 94 69999999999999876666 88999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCccCCCCCCHhhHHHhh--cchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhhcC
Q 010211 255 VRGKSANLPSITDKDWEDIK--FGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASD 332 (515)
Q Consensus 255 lpg~~~~lp~ltekD~~dI~--~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sD 332 (515)
+||+.+++|.||+||++||+ |++++|+|+|++|||++++|+.++++++++.|.++.||+||||++|++|+|||++++|
T Consensus 169 lPg~~~~lp~lTekD~~dl~~~~~~~~~vD~Ia~SfVr~a~Dv~~~r~~l~~~g~~~~iiaKIE~~eav~nldeIl~~sD 248 (461)
T 3qtg_A 169 VEGKDYDISTPAEEDVEALKAISPIRDNIDYVAISLAKSCKDVDSVRSLLTELGFQSQVAVKIETKGAVNNLEELVQCSD 248 (461)
T ss_dssp ETTCCCCCCSSCHHHHHHHHHHGGGGGGCCEEEECSCCSHHHHHHHHHHHHHTTCCCEEEEEECSHHHHHTHHHHHHTCS
T ss_pred cCCCCCCCCCCCHHHHHHHHHHHHhhcCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEEEEECCHHHHHhHHHHHHhcc
Confidence 99999999999999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecccccCC
Q 010211 333 GAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHG 412 (515)
Q Consensus 333 gImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ETa~G 412 (515)
||||||||||+|+|+++|+.+||+|+++|+++|||||+||||||||+++|+|||||++||||||+||+|++|||+|||.|
T Consensus 249 gImVaRGDLgvei~~e~v~~~Qk~ii~~~~~~gkpvi~ATQMLeSMi~~p~PTRAEvsDVanAV~dGaDavMLSgETA~G 328 (461)
T 3qtg_A 249 YVVVARGDLGLHYGLDALPIVQRRIVHTSLKYGKPIAVATQLLDSMQSSPIPTRAEINDVFTTASMGVDSLWLTNETASG 328 (461)
T ss_dssp EEEEEHHHHTTTSCTTTHHHHHHHHHHHHHHTTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHTTCSEEEECHHHHTS
T ss_pred cEEEccccccccCCHHHHHHHHHHHHHHHHHhCCCEEEeccchHhhccCCCccHHHHHHHHHHHHhCCcEEEEcccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhHH--------hhccCCChHHHHHHHhcCCCCeEEEEeCCHHH
Q 010211 413 KFPLKAVKVMHTVALRTESSLPVSITPPTQFSAHKNRIHG--------SNFKSLSAFINNLCLHKSLWHEIFVSLAEREL 484 (515)
Q Consensus 413 ~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~ia~~a~a--------~~v~t~sG~tA~~iS~~RP~~pIiavT~~~~~ 484 (515)
+||+|||++|++||+++|+++.+...+.+..++++.+++. +.++|.||+||+++|||||.+||||+|+++++
T Consensus 329 ~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~aia~aa~~~a~~~~a~Iv~~T~SG~tA~~vsr~RP~~pIia~T~~~~~ 408 (461)
T 3qtg_A 329 KYPLAAVSWLSRILMNVEYQIPQSPLLQNSRDRFAKGLVELAQDLGANILVFSMSGTLARRIAKFRPRGVVYVGTPNVRV 408 (461)
T ss_dssp SCHHHHHHHHHHHHHTCCCCCCCCCCCCSHHHHHHHHHHHHHHHHTCEEEEECSSSHHHHHHHTTCCSSCEEEEESCHHH
T ss_pred CCHHHHHHHHHHHHHHHHhhhhhccCCCCHHHHHHHHHHHHHHhcCCCEEEECCCcHHHHHHHhhCCCCCEEEeCCCHHH
Confidence 9999999999999999999877654455778888876551 35689999999999999999999999999999
Q ss_pred HHhcccccceEEEEcC
Q 010211 485 SRDWCFIKVSCPYICS 500 (515)
Q Consensus 485 ar~l~L~~GV~p~~~~ 500 (515)
+|||+|+|||+|++++
T Consensus 409 ~r~l~l~~GV~p~~~~ 424 (461)
T 3qtg_A 409 ARSLSIVWALEPLYIP 424 (461)
T ss_dssp HHHHTTSTTEEEEECC
T ss_pred HhhceeccceEEEEeC
Confidence 9999999999999987
No 7
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=100.00 E-value=9.9e-123 Score=1009.70 Aligned_cols=412 Identities=41% Similarity=0.634 Sum_probs=388.4
Q ss_pred cCCCCCCCCeEEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHhhcCCceEEEEEecCCCeee
Q 010211 92 VVGPNARRKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVR 171 (515)
Q Consensus 92 ~~~~~~~r~TKIi~TiGPss~~~e~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~~~~~~~~~~i~I~lDL~GPkIR 171 (515)
...|.++|||||||||||+|+++|+|++|+++||||||||||||++++|+++|+++|+++++++ +|++||+||||||||
T Consensus 16 ~~~~~~~r~TKIv~TiGPas~~~e~l~~li~aGm~v~RlNfSHg~~e~h~~~i~~iR~~~~~~~-~~vail~Dl~GPkiR 94 (606)
T 3t05_A 16 PRGSHMMRKTKIVCTIGPASESEEMIEKLINAGMNVARLNFSHGSHEEHKGRIDTIRKVAKRLD-KIVAILLDTKGPEIR 94 (606)
T ss_dssp ------CCCSEEEEECCGGGCSHHHHHHHHHTTEEEEEEETTSSCHHHHHHHHHHHHHHHHHTT-CCCEEEEECCCCCCB
T ss_pred cCCcccccCceEEEEcCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHhC-CCEEEEEeCCCCEEE
Confidence 3445568999999999999999999999999999999999999999999999999999999998 999999999999999
Q ss_pred eeccC-CcEEEecCCEEEEEeecCCCCcceEEecccccccccCcCCEEEEeCCeeEEEE--EEEeCCeEEEEEeeCcEec
Q 010211 172 SGDVP-QPIILKEGQEFNFTIKRGVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAV--KSKTKDLVKCIVVDGGELK 248 (515)
Q Consensus 172 tG~l~-~~i~L~~G~~v~lt~~~~~~~~~~i~v~~~~l~~~v~~Gd~IliDDG~I~l~V--~~~~~~~v~~~V~~gG~L~ 248 (515)
||.++ ++++|++||+|+|+.++..++.+.|+++|++|+++|++||+||+|||+|.|+| ++++++.++|+|++||.|+
T Consensus 95 ~g~~~~~~i~L~~G~~~~lt~~~~~g~~~~i~v~y~~l~~~v~~G~~ilidDG~i~l~V~~~~~~~~~v~~~V~~gG~L~ 174 (606)
T 3t05_A 95 THNMKDGIIELERGNEVIVSMNEVEGTPEKFSVTYENLINDVQVGSYILLDDGLIELQVKDIDHAKKEVKCDILNSGELK 174 (606)
T ss_dssp BCCBTTSEEECCSSCEEEEESSCCCBCSSEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEEETTTTEEEEEECSCCEEE
T ss_pred eecCCCCCEEEcCCCEEEEEecCcCCCCCEEEeccHHHHHhcCCCCEEEEeCCeEEEEEEEEEecCCEEEEEEEECeEEe
Confidence 99996 58999999999999987778889999999999999999999999999999999 7788999999999999999
Q ss_pred cCceeeeCCCccCCCCCCHhhHHHhhcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHH
Q 010211 249 SRRHLNVRGKSANLPSITDKDWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSII 328 (515)
Q Consensus 249 s~KgVnlpg~~~~lp~ltekD~~dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl 328 (515)
++||||+||+.+++|.||+||++||+|++++|+|||++||||+++|+.++++++++.|.++.||+||||++|++|+|||+
T Consensus 175 ~~KgvNlPg~~~~lp~ltekD~~dl~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l~~~~~~i~IiaKIE~~eav~nldeIl 254 (606)
T 3t05_A 175 NKKGVNLPGVRVSLPGITEKDAEDIRFGIKENVDFIAASFVRRPSDVLEIREILEEQKANISVFPKIENQEGIDNIEEIL 254 (606)
T ss_dssp TTCBEECSSSCCCCCSSCHHHHHHHHHHHHTTCSEEEETTCCSHHHHHHHHHHHHHTTCCCEEEECCCSHHHHHTHHHHH
T ss_pred CCceEECCCCccCCCCCChhHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeeccc
Q 010211 329 SASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGE 408 (515)
Q Consensus 329 ~~sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~E 408 (515)
+++|||||||||||+|+|+++|+.+||+|+++|+++|||||+||||||||+++|+|||||++|+||||+||+|++|||+|
T Consensus 255 ~~sDGImVARGDLgvei~~e~vp~~Qk~ii~~~~~~gkpvi~ATQMLeSMi~~p~PTRAEvsDVanAv~dGaDavMLSgE 334 (606)
T 3t05_A 255 EVSDGLMVARGDMGVEIPPEKVPMVQKDLIRQCNKLGKPVITATQMLDSMQRNPRATRAEASDVANAIYDGTDAVMLSGE 334 (606)
T ss_dssp HHCSCEEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSSSGGGTTCSSCCHHHHHHHHHHHHHTCSEEEECHH
T ss_pred HhCCEEEEccccccCcCCHHHHHHHHHHHHHHHHHcCCCeEEehHHHHHhhcCCCccHHHHHHHHHHHHcCCCEEEeccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHHHHHHHHHHhcCCCCCC--------CCCCHHHHHHHHhH---------HhhccCCChHHHHHHHhcCC
Q 010211 409 TAHGKFPLKAVKVMHTVALRTESSLPVSI--------TPPTQFSAHKNRIH---------GSNFKSLSAFINNLCLHKSL 471 (515)
Q Consensus 409 Ta~G~yPveaV~~m~~I~~~aE~~~~~~~--------~~~~~~~~ia~~a~---------a~~v~t~sG~tA~~iS~~RP 471 (515)
||.|+||+|||++|++||+++|++++|.. .+.+..++++.+++ ++.++|.||+||+++|||||
T Consensus 335 TA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~a~~l~a~aIv~~T~sG~ta~~isr~RP 414 (606)
T 3t05_A 335 TAAGLYPEEAVKTMRNIAVSAEAAQDYKKLLSDRTKLVETSLVNAIGISVAHTALNLNVKAIVAATESGSTARTISKYRP 414 (606)
T ss_dssp HHSCSCSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHTCSEEEEECSSSHHHHHHHHTCC
T ss_pred ccCCCCHHHHHHHHHHHHHHHHhhhhhHhhhhhhccccCCCHHHHHHHHHHHHHHhcCCCEEEEEcCCchHHHHHHhhCC
Confidence 99999999999999999999999876532 13467778877654 24579999999999999999
Q ss_pred CCeEEEEeCCHHHHHhcccccceEEEEcCCccc
Q 010211 472 WHEIFVSLAERELSRDWCFIKVSCPYICSFQMT 504 (515)
Q Consensus 472 ~~pIiavT~~~~~ar~l~L~~GV~p~~~~~~~~ 504 (515)
.+||||+|++++++|||+|+|||+|++++...+
T Consensus 415 ~~pIia~t~~~~~~r~l~L~~GV~p~~~~~~~~ 447 (606)
T 3t05_A 415 HSDIIAVTPSEETARQCSIVWGVQPVVKKGRKS 447 (606)
T ss_dssp SSEEEEEESCHHHHHHHHTSSSEEEEECCCCSS
T ss_pred CCCEEEEcCCHHHHHhhhccCCeEEEEeCCCCC
Confidence 999999999999999999999999999975443
No 8
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A
Probab=100.00 E-value=3.5e-122 Score=982.32 Aligned_cols=403 Identities=38% Similarity=0.593 Sum_probs=368.5
Q ss_pred CCCeEEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHhhcCCceEEEEEecCCCeeeeeccC-
Q 010211 98 RRKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVRSGDVP- 176 (515)
Q Consensus 98 ~r~TKIi~TiGPss~~~e~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~~~~~~~~~~i~I~lDL~GPkIRtG~l~- 176 (515)
+|||||||||||+|+++|+|++|+++||||||||||||++++|+++|+++|++++++| +|++|++||||||||||.++
T Consensus 1 ~r~tkIv~TiGPas~~~e~l~~li~aGm~v~RlNfsHg~~e~h~~~i~~iR~~~~~~~-~~v~il~Dl~GPkiR~g~~~~ 79 (470)
T 1e0t_A 1 MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTG-KTAAILLDTKGPEIRTMKLEG 79 (470)
T ss_dssp CCCSEEEEECCGGGCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHHT-CCCEEEEECCCCCEEBCCBGG
T ss_pred CCcceEEEECCCccCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHhcC-CceEEEEeCCCCEEEEEecCC
Confidence 4899999999999999999999999999999999999999999999999999999999 99999999999999999997
Q ss_pred -CcEEEecCCEEEEEee-cCCCCcceEEecccccccccCcCCEEEEeCCeeEEEEEEEeCCeEEEEEeeCcEeccCceee
Q 010211 177 -QPIILKEGQEFNFTIK-RGVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTKDLVKCIVVDGGELKSRRHLN 254 (515)
Q Consensus 177 -~~i~L~~G~~v~lt~~-~~~~~~~~i~v~~~~l~~~v~~Gd~IliDDG~I~l~V~~~~~~~v~~~V~~gG~L~s~KgVn 254 (515)
+++.|++||+|+|+.+ ...++.+.++++|++|+++|++||.||+|||+|.|+|++++++.++|+|++||.|+++||||
T Consensus 80 ~~~v~L~~G~~~~lt~~~~~~g~~~~v~v~y~~l~~~v~~Gd~ilidDG~i~l~V~~~~~~~i~~~v~~gG~L~~~KgvN 159 (470)
T 1e0t_A 80 GNDVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIEGNKVICKVLNNGDLGENKGVN 159 (470)
T ss_dssp GCCEEECTTCEEEEESCTTCCBBTTEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEEETTEEEEEECSCEEECSSCEEE
T ss_pred CCceEEecCCEEEEEeCCccCCCCCEEecchHHHHhhcCCCCEEEEeCCEEEEEEEEEeCCeEEEEEecCcEEeCCceee
Confidence 4799999999999987 34678889999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCccCCCCCCHhhHHHhhcchhcCCcEEEecccCCHHHHHHHHHHHHhc-CCCceEEEEecChhhhhcHHHHHhhcCe
Q 010211 255 VRGKSANLPSITDKDWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSC-NADIHVIVKIESADSIPNLHSIISASDG 333 (515)
Q Consensus 255 lpg~~~~lp~ltekD~~dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~-~~~i~IIaKIEt~~aveNldeIl~~sDg 333 (515)
+||+.+++|.||++|.+||+|++++|+|+|++|||++++|++++++++++. |.++.||+||||++|++|+|||++++||
T Consensus 160 lPg~~~~lp~ltekD~~Di~~~l~~gvD~I~lsfV~saeDv~~~~~~l~~~~~~~i~IiakIEt~eav~nldeI~~~sDg 239 (470)
T 1e0t_A 160 LPGVSIALPALAEKDKQDLIFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHIISKIENQEGLNNFDEILEASDG 239 (470)
T ss_dssp CSSCCCCCCSSCHHHHHHHHHHHHHTCSEEEESSCCSHHHHHHHHHHHHTTTCTTCEEEEEECSHHHHHTHHHHHHHSSE
T ss_pred cCCCcCCCCCCCcCCHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHHhcCCCceEEEEECCHHHHHhHHHHHHHCCE
Confidence 999999999999999999999999999999999999999999999999998 8899999999999999999999999999
Q ss_pred eEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecccccCCC
Q 010211 334 AMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGK 413 (515)
Q Consensus 334 ImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ETa~G~ 413 (515)
|||||||||+|+|+++|+.+||+|+++|+++|||||+||||||||+.+|+|||||++||||||+||+|++|||+|||.|+
T Consensus 240 ImVargDLgveig~e~v~~~qk~ii~~araaGkpvI~ATQMLeSMi~~p~PTRAEvsDVanAV~dG~DavMLSgETA~G~ 319 (470)
T 1e0t_A 240 IMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATMMLDSMIKNPRPTDAEAGDVANAILDGTDAVMLSGESAKGK 319 (470)
T ss_dssp EEEEHHHHHHHSCHHHHHHHHHHHHHHHHHHTCEEEEECC---------CCCHHHHHHHHHHHHHTCSEEEECCC-----
T ss_pred EEECchHhhhhcCHHHHHHHHHHHHHHHHHcCCCEEEechhhHhhccCCCccHHHHhhhhHhhhcCccEEEecccccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhcCCCCCCCC------CCHHHHHHHHhH---------HhhccCCChHHHHHHHhcCCCCeEEEE
Q 010211 414 FPLKAVKVMHTVALRTESSLPVSITP------PTQFSAHKNRIH---------GSNFKSLSAFINNLCLHKSLWHEIFVS 478 (515)
Q Consensus 414 yPveaV~~m~~I~~~aE~~~~~~~~~------~~~~~~ia~~a~---------a~~v~t~sG~tA~~iS~~RP~~pIiav 478 (515)
||+|||++|++||+++|+.+++...+ .+..++++.+++ ++.++|.||+||+++|||||.+||||+
T Consensus 320 yPveaV~~m~~I~~~~E~~~~~~~~~~~~~~~~~~~~aia~aa~~~a~~l~a~aIv~~T~sG~ta~~isr~RP~~pI~a~ 399 (470)
T 1e0t_A 320 YPLEAVSIMATICERTDRVMNSRLEFNNDNRKLRITEAVCRGAVETAEKLDAPLIVVATQGGKSARAVRKYFPDATILAL 399 (470)
T ss_dssp -CHHHHHHHHHHHHHHHTTCCCCCC---------CHHHHHHHHHHHHHHTTCSBEEEECSSSHHHHHHHTTCCSSBEEEE
T ss_pred CHHHHHHHHHHHHHHHHhhhhhhHHHhhhccccchHHHHHHHHHHHHHhcCCCEEEEECCChhHHHHHHhhCCCCCEEEE
Confidence 99999999999999999976654222 234677777654 245799999999999999999999999
Q ss_pred eCCHHHHHhcccccceEEEEcCC
Q 010211 479 LAERELSRDWCFIKVSCPYICSF 501 (515)
Q Consensus 479 T~~~~~ar~l~L~~GV~p~~~~~ 501 (515)
|++++++|||+|+|||+|++++.
T Consensus 400 t~~~~~~r~l~l~~GV~p~~~~~ 422 (470)
T 1e0t_A 400 TTNEKTAHQLVLSKGVVPQLVKE 422 (470)
T ss_dssp ESCHHHHHHGGGSTTEEEEECSC
T ss_pred CCCHHHHHHhhhhccceEEEecC
Confidence 99999999999999999999864
No 9
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=100.00 E-value=1.5e-120 Score=993.46 Aligned_cols=404 Identities=41% Similarity=0.640 Sum_probs=385.3
Q ss_pred CCCeEEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHhhcCCceEEEEEecCCCeeeeeccCC
Q 010211 98 RRKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVRSGDVPQ 177 (515)
Q Consensus 98 ~r~TKIi~TiGPss~~~e~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~~~~~~~~~~i~I~lDL~GPkIRtG~l~~ 177 (515)
+|||||||||||+|+++|+|++|+++||||||||||||++++|+++++++|+++++++ +|++||+||||||||||.+++
T Consensus 2 ~r~tkIv~TiGPas~~~~~l~~l~~aGm~v~RlNfsHg~~~~h~~~i~~ir~~~~~~~-~~v~il~Dl~GPkiR~g~~~~ 80 (587)
T 2e28_A 2 KRKTKIVSTIGPASESVDKLVQLMEAGMNVARLNFSHGDHEEHGRRIANIREAAKRTG-RTVAILLDTKGPEIRTHNMEN 80 (587)
T ss_dssp CCCSEEEEECCTTTCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHTT-CCCEEEEECCCCCCBBCCCTT
T ss_pred CCCceEEEECCCCcCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHhC-CceEEEEeCCCCEEEEeccCC
Confidence 6899999999999999999999999999999999999999999999999999999999 999999999999999999964
Q ss_pred -cEEEecCCEEEEEeecCCCCcceEEecccccccccCcCCEEEEeCCeeEEEEEEE--eCCeEEEEEeeCcEeccCceee
Q 010211 178 -PIILKEGQEFNFTIKRGVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSK--TKDLVKCIVVDGGELKSRRHLN 254 (515)
Q Consensus 178 -~i~L~~G~~v~lt~~~~~~~~~~i~v~~~~l~~~v~~Gd~IliDDG~I~l~V~~~--~~~~v~~~V~~gG~L~s~KgVn 254 (515)
++.|++||+|+|+.+...++++.++++|++|+++|++||+||+|||+|.|+|+++ +++.++|+|++||.|+++||||
T Consensus 81 ~~i~l~~G~~~~l~~~~~~g~~~~i~v~y~~l~~~v~~G~~ilidDG~i~l~V~~~~~~~~~i~~~v~~gg~l~~~Kgvn 160 (587)
T 2e28_A 81 GAIELKEGSKLVISMSEVLGTPEKISVTYPSLIDDVSVGAKILLDDGLISLEVNAVDKQAGEIVTTVLNGGVLKNKKGVN 160 (587)
T ss_dssp SCBCCCSSCEEEEESSCCCCCSSEEEBSCTTSTTTCCTTCEEEETTTTEEEEEEEEETTTTEEEEECCSCCCBCSSCBEE
T ss_pred CcEEEecCCEEEEEecCcCCCCCEEecchHHHHhhcCCCCEEEEeCCEEEEEEEEEecCCCeEEEEEecCCEEcCCceee
Confidence 7999999999999886668888999999999999999999999999999999999 8899999999999999999999
Q ss_pred eCCCccCCCCCCHhhHHHhhcchhcCCcEEEecccCCHHHHHHHHHHHHhcCC-CceEEEEecChhhhhcHHHHHhhcCe
Q 010211 255 VRGKSANLPSITDKDWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNA-DIHVIVKIESADSIPNLHSIISASDG 333 (515)
Q Consensus 255 lpg~~~~lp~ltekD~~dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~-~i~IIaKIEt~~aveNldeIl~~sDg 333 (515)
+||+.+++|.||+||.+||+|++++|+|+|++|||++++|+++++++++++|. ++.||+||||++|++|||||++++||
T Consensus 161 lPg~~~~lp~ltekD~~di~~~l~~g~d~v~~sfV~~a~dv~~~~~~l~~~~~~~~~iiakIE~~eav~nldeIl~~~Dg 240 (587)
T 2e28_A 161 VPGVKVNLPGITEKDRADILFGIRQGIDFIAASFVRRASDVLEIRELLEAHDALHIQIIAKIENEEGVANIDEILEAADG 240 (587)
T ss_dssp CTTSCCCCCSCCHHHHHHHHHHHHHTCSEEEESSCCSHHHHHHHHHHHHHTTCTTSEEEEEECSHHHHHTHHHHHHHSSE
T ss_pred cCCCcCCCCCCCcccHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHHcCCCCceEEEEECCHHHHHhHHHHHHhCCE
Confidence 99999999999999999999999999999999999999999999999999884 89999999999999999999999999
Q ss_pred eEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecccccCCC
Q 010211 334 AMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGK 413 (515)
Q Consensus 334 ImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ETa~G~ 413 (515)
|||||||||+|+|+|+|+.+||+|+++|+++|||||+||||||||+.+|+|||||++|+||||+||+|++|||+|||.|+
T Consensus 241 ImVargDLgvei~~~~v~~~qk~ii~~~~~~gkpvi~ATQmLeSMi~~p~PTRAE~sDvanav~dG~DavMLSgETA~G~ 320 (587)
T 2e28_A 241 LMVARGDLGVEIPAEEVPLIQKLLIKKSNMLGKPVITATQMLDSMQRNPRPTRAEASDVANAIFDGTDAVMLSGETAAGQ 320 (587)
T ss_dssp EEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHTCS
T ss_pred EEEcCchhhhhcCHHHHHHHHHHHHHHHHHcCCCeEEechhhHhhccCCCccHHHHhccchhhhhCcceeeecccccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhcCCCCC--------CCCCCHHHHHHHHhH---------HhhccCCChHHHHHHHhcCCCCeEE
Q 010211 414 FPLKAVKVMHTVALRTESSLPVS--------ITPPTQFSAHKNRIH---------GSNFKSLSAFINNLCLHKSLWHEIF 476 (515)
Q Consensus 414 yPveaV~~m~~I~~~aE~~~~~~--------~~~~~~~~~ia~~a~---------a~~v~t~sG~tA~~iS~~RP~~pIi 476 (515)
||+|||++|++||+++|+.+++. ..+.+..++++.+++ ++.++|.||+||+++|||||.+|||
T Consensus 321 yPveaV~~m~~I~~~~E~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~a~~~~a~aIv~~T~sG~ta~~isr~Rp~~pI~ 400 (587)
T 2e28_A 321 YPVEAVKTMHQIALRTEQALEHRDILSQRTKESQTTITDAIGQSVAHTALNLDVAAIVTPTVSGKTPQMVAKYRPKAPII 400 (587)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHTTCSEEEEECSSSHHHHHHHHTCCSSCEE
T ss_pred CHHHHHHHHHHHHHHHhhhhhhhhHhhhhhcccccchHHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHhcCCCCCEE
Confidence 99999999999999999976541 112356788877664 2447999999999999999999999
Q ss_pred EEeCCHHHHHhcccccceEEEEcCCc
Q 010211 477 VSLAERELSRDWCFIKVSCPYICSFQ 502 (515)
Q Consensus 477 avT~~~~~ar~l~L~~GV~p~~~~~~ 502 (515)
|+|++++++|||+|+|||+|++++..
T Consensus 401 a~t~~~~~~r~l~l~~GV~p~~~~~~ 426 (587)
T 2e28_A 401 AVTSNEAVSRRLALVWGVYTKEAPHV 426 (587)
T ss_dssp EEESSHHHHHHGGGSTTEEEEECCCC
T ss_pred EECCCHHHHHHHHHhcCceEEecccc
Confidence 99999999999999999999998643
No 10
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A
Probab=100.00 E-value=1.8e-117 Score=952.64 Aligned_cols=406 Identities=33% Similarity=0.523 Sum_probs=383.9
Q ss_pred CCCCCeEEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHhhcCCceEEEEEecCCCeeeeecc
Q 010211 96 NARRKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVRSGDV 175 (515)
Q Consensus 96 ~~~r~TKIi~TiGPss~~~e~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~~~~~~~~~~i~I~lDL~GPkIRtG~l 175 (515)
..+|||||||||||+|+++|+|++|+++||||||||||||++++|+++|+++|++++++|++|++||+||||||||||.+
T Consensus 16 ~~~r~tkIv~TlGPas~~~e~l~~li~aGm~v~RlNfSHg~~e~h~~~i~~ir~~~~~~~~~~v~il~Dl~GPkiR~g~~ 95 (500)
T 1a3w_A 16 SDLRRTSIIGTIGPKTNNPETLVALRKAGLNIVRMNFSHGSYEYHKSVIDNARKSEELYPGRPLAIALDTKGPEIRTGTT 95 (500)
T ss_dssp CCCCCSBCCEECCGGGCSHHHHHHHHHHTCCSEECBTTSCCHHHHHHHHHHHHHHHHHCCSSCCCCEEECCCSCCBBCCC
T ss_pred ccCCCcEEEEEcCCCcCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHcCCcceEEEEeCCCCEEEEeec
Confidence 45799999999999999999999999999999999999999999999999999999998769999999999999999999
Q ss_pred CC--cEEEecCCEEEEEeec---CCCCcceEEecccccccccCcCCEEEEeCCeeEEEEEEE-eCCeEEEEEeeCcEecc
Q 010211 176 PQ--PIILKEGQEFNFTIKR---GVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSK-TKDLVKCIVVDGGELKS 249 (515)
Q Consensus 176 ~~--~i~L~~G~~v~lt~~~---~~~~~~~i~v~~~~l~~~v~~Gd~IliDDG~I~l~V~~~-~~~~v~~~V~~gG~L~s 249 (515)
.+ ++.|++||+|+|+.+. ..++.+.++++|++|+++|++||.||+|||+|.|+|+++ +++.++|+|++||.|++
T Consensus 96 ~~~~~v~l~~G~~~~lt~~~~~~~~g~~~~v~v~y~~l~~~v~~Gd~ilidDG~i~l~V~~~~~~~~v~~~v~~gG~L~~ 175 (500)
T 1a3w_A 96 TNDVDYPIPPNHEMIFTTDDKYAKACDDKIMYVDYKNITKVISAGRIIYVDDGVLSFQVLEVVDDKTLKVKALNAGKICS 175 (500)
T ss_dssp SSSSCCCCCSSCEEEEECSSTTTTTCCSSCEEBSCTTHHHHCCTTCEEEETTTTEEEECCBCCC--CEEEEBCSCCCCCS
T ss_pred CCCCceEeecCCEEEEEeCCcccCCCCCcEEEechHHHHhhcCCCCEEEEeCCEEEEEEEEEccCCeEEEEEecCCEEeC
Confidence 64 6999999999999875 357888999999999999999999999999999999999 89999999999999999
Q ss_pred CceeeeCCCccCCCCCCHhhHHHhhcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHh
Q 010211 250 RRHLNVRGKSANLPSITDKDWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIIS 329 (515)
Q Consensus 250 ~KgVnlpg~~~~lp~ltekD~~dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~ 329 (515)
+||||+||+.+++|.||++|.+||+|+++.|+|+|++|||++++|++++++++.+.+.++.||+||||++|++|+|||++
T Consensus 176 ~KgvNlPg~~~~lp~lt~~D~~DI~~~l~~g~d~I~lpfV~saeDv~~~~~~l~~~~~~i~IiakIEt~eav~nldeI~~ 255 (500)
T 1a3w_A 176 HKGVNLPGTDVDLPALSEKDKEDLRFGVKNGVHMVFASFIRTANDVLTIREVLGEQGKDVKIIVKIENQQGVNNFDEILK 255 (500)
T ss_dssp SCBEECTTCCCCCCSSCHHHHHHHHHHHHHTCSEEEECSCCSHHHHHHHHHHHHHHHTTSEEEEEECSSHHHHSHHHHHH
T ss_pred CCCCcCCCCccCCCCCChhHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHhcCCCcEEEEEECChHHHHhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998889999999999999999999999
Q ss_pred hcCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecccc
Q 010211 330 ASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGET 409 (515)
Q Consensus 330 ~sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ET 409 (515)
++|||||||||||+|+|.++|+.+|++|+++|+++|||+|+||||||||+.+|.|||||++|++|++.+|+|++|||+||
T Consensus 256 ~~DgImvgrgDLgvelg~~~v~~aqk~ii~aaraaGkpvi~ATQMLeSMi~~~~ptraEvsdva~av~~G~d~vmLs~et 335 (500)
T 1a3w_A 256 VTDGVMVARGDLGIEIPAPEVLAVQKKLIAKSNLAGKPVICATQMLESMTYNPRPTRAEVSDVGNAILDGADCVMLSGET 335 (500)
T ss_dssp HSSEEEECHHHHHHHTTGGGHHHHHHHHHHHHHHHTCCEEECSSTTGGGGSCSSCCHHHHHHHHHHHHHTCSEECBSTTT
T ss_pred hCCEEEECchHhhhhcCcHHHHHHHHHHHHHHHhcCCCEEEEeehhhhhccCCCchHHHHHHHHHHHHhCCCEEEecchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHHhcCCCCC----------CCCCCHHHHHHHHhH---------HhhccCCChHHHHHHHhcC
Q 010211 410 AHGKFPLKAVKVMHTVALRTESSLPVS----------ITPPTQFSAHKNRIH---------GSNFKSLSAFINNLCLHKS 470 (515)
Q Consensus 410 a~G~yPveaV~~m~~I~~~aE~~~~~~----------~~~~~~~~~ia~~a~---------a~~v~t~sG~tA~~iS~~R 470 (515)
+.|+||+|||++|++||+++|+.++|. ..+.+..++++.+++ ++.++|.||+||+++||||
T Consensus 336 a~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~a~~~~a~aIv~~T~sG~ta~~isr~R 415 (500)
T 1a3w_A 336 AKGNYPINAVTTMAETAVIAEQAIAYLPNYDDMRNCTPKPTSTTETVAASAVAAVFEQKAKAIIVLSTSGTTPRLVSKYR 415 (500)
T ss_dssp TTCSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTSCCSSCCHHHHHHHHHHHHHHHHTCSCEEEECSSSHHHHHHHHTC
T ss_pred hcchhHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhccccccchHHHHHHHHHHHHHhcCCCEEEEECCCchHHHHHHhhC
Confidence 999999999999999999999976532 112356778877664 2457999999999999999
Q ss_pred CCCeEEEEeCCHHHHHhcccccceEEEEcCC
Q 010211 471 LWHEIFVSLAERELSRDWCFIKVSCPYICSF 501 (515)
Q Consensus 471 P~~pIiavT~~~~~ar~l~L~~GV~p~~~~~ 501 (515)
|.+||||+|++++++|||+|+|||+|++++.
T Consensus 416 P~~pI~a~t~~~~~~r~l~l~~GV~p~~~~~ 446 (500)
T 1a3w_A 416 PNCPIILVTRCPRAARFSHLYRGVFPFVFEK 446 (500)
T ss_dssp CSSCEEEEESCTTHHHHGGGSTTEEEEECCS
T ss_pred CCCCEEEEcCCHHHHHhhhhhCCeEEEEecc
Confidence 9999999999999999999999999999975
No 11
>1izc_A Macrophomate synthase intermolecular diels-aldera; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5
Probab=99.76 E-value=4.7e-19 Score=182.71 Aligned_cols=149 Identities=13% Similarity=0.125 Sum_probs=128.8
Q ss_pred HHhhcchhcCCcEEEecccCCHHHHHHHHHHHHhc--------------------------------CCCceEEEEecCh
Q 010211 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSC--------------------------------NADIHVIVKIESA 318 (515)
Q Consensus 271 ~dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~--------------------------------~~~i~IIaKIEt~ 318 (515)
.+|+++++.|+++|.+|||++++|++++++++... +.++.|++||||+
T Consensus 108 ~di~~~LdaGa~gImlP~V~saee~~~~~~~~~~~p~g~Rg~~~~a~~~G~~~~~~~~~~~~y~~~a~~~i~vi~mIEt~ 187 (339)
T 1izc_A 108 VSLSTALDAGAAGIVIPHVETVEEVREFVKEMYYGPIGRRSFSPWTFSPGIADASLFPNDPYNVATSNNHVCIIPQIESV 187 (339)
T ss_dssp HHHHHHHHHTCSEEEETTCCCHHHHHHHHHHHSCTTTCCCCCCSTTCBTTTBCCCSSTTCTTCHHHHHHHCEEEEEECSH
T ss_pred HHHHHHHhCCCCEEEeCCCCCHHHHHHHHHHhccCccCcccccchhhcccccccccccchhhhhhhcCcCceEEEEEChH
Confidence 57888899999999999999999999998887531 2357899999999
Q ss_pred hhhhcHHHHHhh--cCeeEEcCCccccc--------CCC---CCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcC
Q 010211 319 DSIPNLHSIISA--SDGAMVARGDLGAE--------LPI---EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPT 385 (515)
Q Consensus 319 ~aveNldeIl~~--sDgImIgrgDLg~e--------lg~---e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~Pt 385 (515)
+|++|+++|+++ +|++|||++||+.+ +|. ++|..++++++.+|+++|||++..+ ..|
T Consensus 188 ~av~nldeIaa~~~vD~l~iG~~DLs~~~~~~~~~~lG~~~~p~v~~a~~~iv~aaraaGk~~g~~~---------~d~- 257 (339)
T 1izc_A 188 KGVENVDAIAAMPEIHGLMFGPGDYMIDAGLDLNGALSGVPHPTFVEAMTKFSTAAQRNGVPIFGGA---------LSV- 257 (339)
T ss_dssp HHHHTHHHHHTCTTCCCEEECHHHHHHHTTCCTTCCTTSCCCHHHHHHHHHHHHHHHHTTCCEEEEC---------SSG-
T ss_pred HHHHHHHHHhcCCCCCEEEECHHHHHhhhhcccchhhCCCCCHHHHHHHHHHHHHHHHhCCceeEec---------CCH-
Confidence 999999999986 99999999999999 887 6899999999999999999998743 344
Q ss_pred hHHHhHHHHHHHhCCcEEeecccccC--CCCHHHHHHHHHHHHHHHhcCCC
Q 010211 386 RAEVSDIAIAVREGADAVMLSGETAH--GKFPLKAVKVMHTVALRTESSLP 434 (515)
Q Consensus 386 rAEv~DvanaV~~G~D~vmLs~ETa~--G~yPveaV~~m~~I~~~aE~~~~ 434 (515)
.+..+++..|+|+++++.++.. +.| .+.|+++++|+.++|+...
T Consensus 258 ----~~a~~~~~~Gf~~l~~~~di~~l~~~~-~~~v~~a~~iv~a~e~~~~ 303 (339)
T 1izc_A 258 ----DMVPSLIEQGYRAIAVQFDVWGLSRLV-HGSLAQARASAKQFAGQGK 303 (339)
T ss_dssp ----GGHHHHHHTTEEEEEEEEHHHHHHHHH-HHHHHHHHHHHGGGCC---
T ss_pred ----HHHHHHHHhCCCEEEecHHHHHHHHHH-HHHHHHHHHHHHHHHHHHh
Confidence 3566899999999999998875 666 7999999999999997643
No 12
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=99.73 E-value=2.6e-19 Score=180.75 Aligned_cols=126 Identities=24% Similarity=0.264 Sum_probs=102.7
Q ss_pred hHHHhhcchhcCCcEEEecccCCHHHHHHHHHHHH---------------------------hcCCCceEEEEecChhhh
Q 010211 269 DWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLK---------------------------SCNADIHVIVKIESADSI 321 (515)
Q Consensus 269 D~~dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~---------------------------~~~~~i~IIaKIEt~~av 321 (515)
|..||+++++.|+++|.+|||++++|++++.+.++ ..++++.+++||||++|+
T Consensus 100 d~~di~~~ld~ga~~ImlP~V~saeea~~~~~~~~~~p~G~Rg~g~~~~ra~~~g~~~~y~~~~~~~~~vi~mIEt~~av 179 (287)
T 2v5j_A 100 DPVQIKQLLDVGTQTLLVPMVQNADEAREAVRATRYPPAGIRGVGSALARASRWNRIPDYLQKANDQMCVLVQIETREAM 179 (287)
T ss_dssp CHHHHHHHHHTTCCEEEESCCCSHHHHHHHHHHTSCTTTSCCCGGGTTTGGGTTTTSTTHHHHHHHHCEEEEEECSHHHH
T ss_pred CHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHHhccCccCccccccchhhhhhccchhhhHhhcCCCcEEEEEECcHHHH
Confidence 34588999999999999999999999998876542 233458899999999999
Q ss_pred hcHHHHHhh--cCeeEEcCCcccccCCC------CCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHH
Q 010211 322 PNLHSIISA--SDGAMVARGDLGAELPI------EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIA 393 (515)
Q Consensus 322 eNldeIl~~--sDgImIgrgDLg~elg~------e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~Dva 393 (515)
+|+++|+++ +|++|||++||+.++|. ++|..++++++.+|+++|||+++. ...|..++
T Consensus 180 ~n~deIaa~~~vD~l~iG~~DLs~~lg~~~~~~~p~v~~a~~~iv~aaraaG~~~gv~---------~~d~~~a~----- 245 (287)
T 2v5j_A 180 KNLPQILDVEGVDGVFIGPADLSADMGYAGNPQHPEVQAAIEQAIVQIRESGKAPGIL---------IANEQLAK----- 245 (287)
T ss_dssp HTHHHHHTSTTEEEEEECHHHHHHHTTSTTCCCSHHHHHHHHHHHHHHHHTTSEEEEE---------CCCHHHHH-----
T ss_pred HHHHHHhCcCCCCEEEECHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHcCCeeEEe---------cCCHHHHH-----
Confidence 999999986 99999999999999997 568999999999999999999873 24555444
Q ss_pred HHHHhCCcEEeeccc
Q 010211 394 IAVREGADAVMLSGE 408 (515)
Q Consensus 394 naV~~G~D~vmLs~E 408 (515)
.++..|++.+.++.+
T Consensus 246 ~~~~~G~~~~s~~~d 260 (287)
T 2v5j_A 246 RYLELGALFVAVGVD 260 (287)
T ss_dssp HHHHTTCSEEEEEEH
T ss_pred HHHHhCCCEEEECcH
Confidence 445556665555433
No 13
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=99.72 E-value=2.9e-19 Score=178.27 Aligned_cols=124 Identities=24% Similarity=0.301 Sum_probs=101.4
Q ss_pred HHHhhcchhcCCcEEEecccCCHHHHHHHHHHHH---------------------------hcCCCceEEEEecChhhhh
Q 010211 270 WEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLK---------------------------SCNADIHVIVKIESADSIP 322 (515)
Q Consensus 270 ~~dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~---------------------------~~~~~i~IIaKIEt~~ave 322 (515)
..+|+++++.|+|+|.+|||++++|++++.+.++ ..++++.+++||||++|++
T Consensus 80 ~~~i~~~l~~g~~~I~~P~V~s~ee~~~~~~~~~~~p~G~Rg~~~~~~~~~~~g~~~~y~~~~~~~~~v~~~IEt~~av~ 159 (267)
T 2vws_A 80 KPLIKQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALD 159 (267)
T ss_dssp HHHHHHHHHTTCCEEEECCCCSHHHHHHHHHHTSCTTTSCCCSCGGGSGGGGGGTSTTHHHHHHHHCEEEEECCSHHHHH
T ss_pred HHHHHHHHHhCCCEEEeCCCCCHHHHHHHHHHHcCCCCCccccccchhhhhhcCcchhhhhhcccccEEEEEECCHHHHH
Confidence 4678888999999999999999999998877652 2234588999999999999
Q ss_pred cHHHHHhh--cCeeEEcCCcccccCCC------CCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHH
Q 010211 323 NLHSIISA--SDGAMVARGDLGAELPI------EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAI 394 (515)
Q Consensus 323 NldeIl~~--sDgImIgrgDLg~elg~------e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~Dvan 394 (515)
|+++|+++ +|+++||++||+.++|. +++..++++++.+|+++|||+++.+ ..|..+ ..
T Consensus 160 ~~~eIa~~~gvd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~aaG~~~~v~~---------~d~~~a-----~~ 225 (267)
T 2vws_A 160 NLDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETSIRRIRAAGKAAGFLA---------VAPDMA-----QQ 225 (267)
T ss_dssp THHHHHTSTTCCEEEECHHHHHHHTTCSSSCCTHHHHHHHHHHHHHHHHTTCEEEEEC---------SSHHHH-----HH
T ss_pred HHHHHhCCCCCCEEEEChHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCeEEEec---------CCHHHH-----HH
Confidence 99999988 99999999999999997 4689999999999999999998832 244333 24
Q ss_pred HHHhCCcEEeecc
Q 010211 395 AVREGADAVMLSG 407 (515)
Q Consensus 395 aV~~G~D~vmLs~ 407 (515)
++..|++.+..+.
T Consensus 226 ~~~~G~~~~s~~~ 238 (267)
T 2vws_A 226 CLAWGANFVAVGV 238 (267)
T ss_dssp HHHTTCCEEEEEE
T ss_pred HHHCCCCEEEEch
Confidence 4556666555543
No 14
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=99.69 E-value=3.7e-17 Score=162.79 Aligned_cols=127 Identities=20% Similarity=0.263 Sum_probs=108.6
Q ss_pred HHhhcchhcCCcEEEecccCCHHHHHHHHHHH---------------------------HhcCCCceEEEEecChhhhhc
Q 010211 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYL---------------------------KSCNADIHVIVKIESADSIPN 323 (515)
Q Consensus 271 ~dI~~al~~gvD~ValSfVrsa~dv~~vr~~l---------------------------~~~~~~i~IIaKIEt~~aveN 323 (515)
.||+++++.|+|+|.+|||++++|++++.+++ ...+.++.++++|||++|++|
T Consensus 79 ~di~~~ld~G~~gI~lP~v~saed~~~~~~~~~~~p~G~Rg~~~~r~~~~g~~~~~~y~~~~~~~~~v~~mIEt~~av~~ 158 (261)
T 3qz6_A 79 AHVQRLLDIGAEGFMIPGVQSAETMRETVRLAKYPPLGERGVGGSIVTDFKPVNWAEWVQERNDEIFIMAQIEHVKAVED 158 (261)
T ss_dssp HHHHHHHHHTCCEEEETTCCSHHHHHHHHHHHSCTTTCCCCCCCGGGGTTCCCCHHHHHHHHHTTCEEEEEECCHHHHHT
T ss_pred HHHHHHHhcCCCEEEECCcCCHHHHHHHHHHhccCCCCCcCcccchhhhccccchhhHHhcCCCCeEEEEEECCHHHHHH
Confidence 47889999999999999999999999877665 334567899999999999999
Q ss_pred HHHHHhh--cCeeEEcCCcccccCCCC------CHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHH
Q 010211 324 LHSIISA--SDGAMVARGDLGAELPIE------DVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIA 395 (515)
Q Consensus 324 ldeIl~~--sDgImIgrgDLg~elg~e------~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~Dvana 395 (515)
+++|+++ +|+++||++||+.++|.+ ++..++++++.+|+++|||+++.+ ..|..++ ..+
T Consensus 159 ~~eIaa~~~vd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~aaG~~~g~~~---------~~~~~~~----~~~ 225 (261)
T 3qz6_A 159 IDSILAVQGVDAVIFGPRDLSNDLGIIGQTEHPKVYECYEKVYRAADRQGVVKGFFT---------AADAAKM----GWA 225 (261)
T ss_dssp HHHHHTSTTCCEEEECHHHHHHHTTCTTCTTCHHHHHHHHHHHHHHHHHTCEEEEEE---------SSCGGGG----HHH
T ss_pred HHHHhCCCCCCEEEECHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEe---------CCHHHHH----HHH
Confidence 9999965 999999999999999873 699999999999999999999854 4666652 255
Q ss_pred HHhCCcEEeeccccc
Q 010211 396 VREGADAVMLSGETA 410 (515)
Q Consensus 396 V~~G~D~vmLs~ETa 410 (515)
+..|.+.+.++.++.
T Consensus 226 ~~~G~~~~s~~~D~~ 240 (261)
T 3qz6_A 226 VERGAQMLLWSGDVA 240 (261)
T ss_dssp HHTTCCEEEEEEHHH
T ss_pred HHCCCCEEEEhhHHH
Confidence 788888888887754
No 15
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=99.68 E-value=5.5e-17 Score=160.68 Aligned_cols=127 Identities=24% Similarity=0.289 Sum_probs=105.6
Q ss_pred hHHHhhcchhcCCcEEEecccCCHHHHHHHHHHHH--------------------------hcCCCceEEEEecChhhhh
Q 010211 269 DWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLK--------------------------SCNADIHVIVKIESADSIP 322 (515)
Q Consensus 269 D~~dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~--------------------------~~~~~i~IIaKIEt~~ave 322 (515)
|...|+++++.|+++|.+|||++++|++.+.+.++ ..+.++.++++|||++|++
T Consensus 80 ~~~~i~~~l~~g~~gI~~P~V~s~~ev~~~~~~~~~~p~g~Rg~~~~~~~~~~g~~~~~~~~~~~~~~v~~~IEt~~av~ 159 (256)
T 1dxe_A 80 EPVIIKRLLDIGFYNFLIPFVETKEEAELAVASTRYPPEGIRGVSVSHRANMFGTVADYFAQSNKNITILVQIESQQGVD 159 (256)
T ss_dssp CHHHHHHHHHTTCCEEEESCCCSHHHHHHHHHTTSCTTTCCCCCCSSSGGGGGGTSTTHHHHHTTSCEEEEEECSHHHHH
T ss_pred CHHHHHHHHhcCCceeeecCcCCHHHHHHHHHHhcCCCCCccCCCcchhhhhcCchHHHHHhcCcccEEEEEECCHHHHH
Confidence 34458888999999999999999999999877663 2356799999999999999
Q ss_pred cHHHHHhh--cCeeEEcCCcccccCCC------CCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHH
Q 010211 323 NLHSIISA--SDGAMVARGDLGAELPI------EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAI 394 (515)
Q Consensus 323 NldeIl~~--sDgImIgrgDLg~elg~------e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~Dvan 394 (515)
|+++|+++ +|+++||++||+.++|. +.+..++++++.+|+++|||+++.+ ..|..+ ..
T Consensus 160 ~~~eIa~~~~vd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~a~G~~~~v~~---------~d~~~~-----~~ 225 (256)
T 1dxe_A 160 NVDAIAATEGVDGIFVGPSDLAAALGHLGNASHPDVQKAIQHIFNRASAHGKPSGILA---------PVEADA-----RR 225 (256)
T ss_dssp THHHHHTSTTCCEEEECHHHHHHHTTCTTCTTSHHHHHHHHHHHHHHHHTTCCEEEEC---------CSHHHH-----HH
T ss_pred hHHHHhCCCCCCEEEEChHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCceEEec---------CCHHHH-----HH
Confidence 99999985 99999999999999997 4699999999999999999998732 344433 35
Q ss_pred HHHhCCcEEeecccc
Q 010211 395 AVREGADAVMLSGET 409 (515)
Q Consensus 395 aV~~G~D~vmLs~ET 409 (515)
++..|++.+.++.++
T Consensus 226 ~~~~G~~~~s~~~d~ 240 (256)
T 1dxe_A 226 YLEWGATFVAVGSDL 240 (256)
T ss_dssp HHHTTCCEEEEEEHH
T ss_pred HHHcCCCEEEechHH
Confidence 677788777776543
No 16
>1sgj_A Citrate lyase, beta subunit; trimer, TIM barrel, structural genomics, PSI, protein structure initiative; 1.84A {Deinococcus radiodurans} SCOP: c.1.12.5
Probab=99.59 E-value=3.7e-15 Score=149.47 Aligned_cols=130 Identities=11% Similarity=0.058 Sum_probs=109.5
Q ss_pred HhhHHHhhcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh--cCeeEEcCCccccc
Q 010211 267 DKDWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA--SDGAMVARGDLGAE 344 (515)
Q Consensus 267 ekD~~dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~--sDgImIgrgDLg~e 344 (515)
+++.+||++.++ |+|+|.+|||++++|++.+.+++...|.++.++++|||++|+.|+++|++. +|+++||++||+.+
T Consensus 81 ~~~~~dl~~~l~-g~~~i~lPkv~s~~~v~~~~~~l~~~g~~~~i~~~IEt~~av~~~~eIa~~~~vd~l~iG~~DL~~~ 159 (284)
T 1sgj_A 81 PYFEDDLSVLTP-ELSGVVVPKLEMGAEARQVAQMLQERSLPLPILAGLETGAGVWNAREIMEVPEVAWAYFGAEDYTTD 159 (284)
T ss_dssp TTHHHHGGGCCT-TSSEEEECSCCSHHHHHHHHHHHHHTTCCCCEEEEECSHHHHHTHHHHHTSTTEEEEEECHHHHHHH
T ss_pred HhHHHHHHHHhc-cCCEEEeCCCCCHHHHHHHHHHHHhcCCCeEEEEEecCHHHHHHHHHHHcCCCCcEEEECHHHHHHH
Confidence 567899999999 999999999999999999999998777789999999999999999999974 89999999999999
Q ss_pred CCC------CCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHH--HhHHHHHHHhCCcEEee
Q 010211 345 LPI------EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE--VSDIAIAVREGADAVML 405 (515)
Q Consensus 345 lg~------e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAE--v~DvanaV~~G~D~vmL 405 (515)
+|. +.+..++++++.+|+++|||++-. ..+.....+ ..+...+...|+|+-+.
T Consensus 160 lg~~~~~~~~~~~~a~~~iv~aa~a~G~~~i~~--------v~~~~~d~~~l~~~~~~~~~~Gf~Gk~~ 220 (284)
T 1sgj_A 160 LGGKRTPGGLEVLYARSQVALAARLTGVAALDI--------VVTALNDPETFRADAEQGRALGYSGKLC 220 (284)
T ss_dssp HTCCCCSSCGGGHHHHHHHHHHHHHHTCEEEEC--------CCCCCSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred hCCCCCCChHHHHHHHHHHHHHHHHcCCCeeeC--------CcCCCCCHHHHHHHHHHHHhCCCCcccc
Confidence 998 679999999999999999998531 111111111 24556788999986665
No 17
>2xz9_A Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); thermophilic, PEP-utilising enzyme, transferase; 1.68A {Thermoanaerobacter tengcongensis} PDB: 2bg5_A 2xz7_A*
Probab=99.38 E-value=4.7e-13 Score=137.24 Aligned_cols=133 Identities=16% Similarity=0.154 Sum_probs=108.6
Q ss_pred CCCCHhhHHHhhcchhcCCcEEEecccCCHHHHHHHHHHHHh-----------cCCCceEEEEecChhhhhcHHHHHhhc
Q 010211 263 PSITDKDWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKS-----------CNADIHVIVKIESADSIPNLHSIISAS 331 (515)
Q Consensus 263 p~ltekD~~dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~~-----------~~~~i~IIaKIEt~~aveNldeIl~~s 331 (515)
|.+-..|.+.|..+.+.|.+.|.+|+|++++++..+++++.. .|+++.++++|||+.|+.|+|+|++++
T Consensus 118 p~~~~~ql~Ai~ra~~~G~~~ImvPmV~s~~E~~~a~~~v~~~~~~~r~~G~~~~~~~~vg~mIEtp~av~~~d~Ia~~v 197 (324)
T 2xz9_A 118 PDIFKTQLRAILRASAYGNVQIMYPMISSVEEVRKANSILEEVKAELDREGVKYDKEIKVGIMVEIPSAAVTADILAKEV 197 (324)
T ss_dssp HHHHHHHHHHHHHHGGGSCEEEEECSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCTTCEEEEEECSHHHHHTHHHHTTTC
T ss_pred hhhHHHHHHHHHHHHhCCCCEEEEcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEECcHHHHHHHHHHHHhC
Confidence 455566778888888899999999999999998888877742 234689999999999999999999999
Q ss_pred CeeEEcCCccccc-CCC---------------CCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHH
Q 010211 332 DGAMVARGDLGAE-LPI---------------EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIA 395 (515)
Q Consensus 332 DgImIgrgDLg~e-lg~---------------e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~Dvana 395 (515)
|+++||++||+.. +|. +.|..+.++++++|+++|||+++++++ .+.|. ....+
T Consensus 198 D~~siGtnDLtq~~lg~dR~~~~~~~~~~~~~p~v~~ai~~vv~aar~aG~~vgvcge~------~~dp~-----~~~~l 266 (324)
T 2xz9_A 198 DFFSIGTNDLTQYTLAVDRMNEHVKEYYQPFHPAILRLVKMVIDAAHKEGKFAAMCGEM------AGDPL-----AAVIL 266 (324)
T ss_dssp SEEEECHHHHHHHHTTCCTTCGGGGGGCCTTCHHHHHHHHHHHHHHHHTTCEEEECSGG------GGCHH-----HHHHH
T ss_pred cEEEECHHHHHHHHhCCCCCcccccccCCCCCHHHHHHHHHHHHHHHHHCCceeecCcc------CCCHH-----HHHHH
Confidence 9999999999963 442 468899999999999999999997753 22342 33467
Q ss_pred HHhCCcEEeec
Q 010211 396 VREGADAVMLS 406 (515)
Q Consensus 396 V~~G~D~vmLs 406 (515)
+..|.|.+..+
T Consensus 267 ~~lG~~~~si~ 277 (324)
T 2xz9_A 267 LGLGLDEFSMS 277 (324)
T ss_dssp HHHTCCEEEEC
T ss_pred HHCCCCEEEEC
Confidence 88999996554
No 18
>3qll_A Citrate lyase; beta barrel; 2.45A {Yersinia pestis}
Probab=99.22 E-value=3e-11 Score=123.41 Aligned_cols=132 Identities=20% Similarity=0.222 Sum_probs=105.4
Q ss_pred CHhhHHHhhcchhcCC--cEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh---cCeeEEcCCc
Q 010211 266 TDKDWEDIKFGVDNQV--DFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA---SDGAMVARGD 340 (515)
Q Consensus 266 tekD~~dI~~al~~gv--D~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~---sDgImIgrgD 340 (515)
|++-.+||+..++.|. |+|.+|+|++++++..+.+++...+.++.++++|||++|+.|+++|++. +|++++|++|
T Consensus 113 t~~~~~Dl~~~l~~g~~~~gIvlPKvesa~~v~~~~~~l~~~~~~~~l~~~IET~~gv~~~~eIa~a~~~v~~l~~G~~D 192 (316)
T 3qll_A 113 TRAGIEDIHALLECGSLPDYLVLPKTESAAHLQILDRLMMFAGSDTRLIGIIESVRGLNAVESIAAATPKLAGLIFGAAD 192 (316)
T ss_dssp SHHHHHHHHHHHHSCCCCSEEEETTCCSHHHHHHHHHHTSCC--CCEEEEEECSHHHHHTHHHHHTSCTTEEEEEECHHH
T ss_pred CchhHHHHHHHHhCCCCCCEEEeCCCCCHHHHHHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHHHhcCCCceEEEECHHH
Confidence 4555678888787774 9999999999999999999998777789999999999999999999983 8999999999
Q ss_pred ccccCCCC----CHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHH--HhHHHHHHHhCCcEEee
Q 010211 341 LGAELPIE----DVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE--VSDIAIAVREGADAVML 405 (515)
Q Consensus 341 Lg~elg~e----~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAE--v~DvanaV~~G~D~vmL 405 (515)
|+.++|.. .+..+..+++.+|+++|++++- + ..+.-...| ..+...+...|+++-+.
T Consensus 193 L~~~lG~~~~~~~l~~ar~~iv~AaraaGi~~id-~-------v~~~~~D~~gl~~e~~~~r~lGf~Gk~~ 255 (316)
T 3qll_A 193 MAADIGAASTWEPLALARARLVSACAMNGIPAID-A-------PFFDVHDVSGLQSETLRASDFGFSAKAA 255 (316)
T ss_dssp HHHHHTCCSSHHHHHHHHHHHHHHHHHHTCCEEE-C-------CCSCSSCHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHhCCCCCcHHHHHHHHHHHHHHHHcCCceee-c-------cccCcCCHHHHHHHHHHHHHCCCCeEEe
Confidence 99999973 5778889999999999999843 2 111111111 44566778889987655
No 19
>2ols_A Phosphoenolpyruvate synthase; MC structural genomics, PSI-2, protein structure initiative, M center for structural genomics, transferase; 2.40A {Neisseria meningitidis}
Probab=99.18 E-value=2.1e-11 Score=138.01 Aligned_cols=131 Identities=18% Similarity=0.179 Sum_probs=109.6
Q ss_pred CCHhhHHHhhcchh-cC--CcEEEecccCCHHHHHHHHHHHHhcCC----C-ceEEEEecChhhhhcHHHHHhhcCeeEE
Q 010211 265 ITDKDWEDIKFGVD-NQ--VDFYAVSFVKDAKVVHELKDYLKSCNA----D-IHVIVKIESADSIPNLHSIISASDGAMV 336 (515)
Q Consensus 265 ltekD~~dI~~al~-~g--vD~ValSfVrsa~dv~~vr~~l~~~~~----~-i~IIaKIEt~~aveNldeIl~~sDgImI 336 (515)
+.+.|.+.|..+.+ .| .+.|.+|||+++++++.+++.++..+. + +.++++|||+.|+.|+|+|++++|+++|
T Consensus 622 ~~~~ql~Ai~ra~~~~G~~~~~ImvP~V~t~~E~~~~~~~l~~~g~~~~~~~~~vg~MIEtp~a~~~ad~ia~~vD~~si 701 (794)
T 2ols_A 622 CFALECKALKRVRDEMGLTNVEIMIPFVRTLGEAEAVVKALKENGLERGKNGLRLIMMCELPSNAVLAEQFLQYFDGFSI 701 (794)
T ss_dssp HHHHHHHHHHHHHHTSCCTTEEEEECCCCSHHHHHHHHHHHHHTTCCTTGGGCCEEEEECSHHHHHTHHHHHTTSSEEEE
T ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCCCCHHHHHHHHHHHHhcCcccCccCCEEEEEECcHHHHHHHHHHHHhCCEEEE
Confidence 34456677777877 68 789999999999999999999876553 3 8899999999999999999999999999
Q ss_pred cCCccccc-CCC---------------CCHHHHHHHHHHHHHhcCCcEEEEeccccccccCC-CcChHHHhHHHHHHHhC
Q 010211 337 ARGDLGAE-LPI---------------EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHP-TPTRAEVSDIAIAVREG 399 (515)
Q Consensus 337 grgDLg~e-lg~---------------e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~-~PtrAEv~DvanaV~~G 399 (515)
|++||+.. +|+ +.|..+.++++++|+++|||++++.|+ .+ .|.. +..++..|
T Consensus 702 GtnDLtq~tlg~~R~~~~~~~~~~~~~p~v~~~i~~~v~aar~~g~~vgicGe~------~~~dp~~-----~~~~~~~G 770 (794)
T 2ols_A 702 GSNDMTQLTLGLDRDSGLVSESFDERNPAVKVMLHLAISACRKQNKYVGICGQG------PSDHPDF-----AKWLVEEG 770 (794)
T ss_dssp EHHHHHHHHHTCCTTCTTTGGGCCTTSHHHHHHHHHHHHHHHTTTCEEEEESSH------HHHCHHH-----HHHHHHHT
T ss_pred CHHHHHHHHhCCCCCcchhccccCCCCHHHHHHHHHHHHHHHHhCCEEEEeccc------CCCCHHH-----HHHHHHCC
Confidence 99999998 885 348899999999999999999998752 11 3332 34678899
Q ss_pred CcEEeec
Q 010211 400 ADAVMLS 406 (515)
Q Consensus 400 ~D~vmLs 406 (515)
.|.+.++
T Consensus 771 ~~~~s~~ 777 (794)
T 2ols_A 771 IESVSLN 777 (794)
T ss_dssp CCEEEEC
T ss_pred CCEEEEC
Confidence 9998876
No 20
>1u5h_A CITE; TIM barrel, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC, lyase; 1.65A {Mycobacterium tuberculosis} SCOP: c.1.12.5 PDB: 1u5v_A* 1z6k_A
Probab=99.15 E-value=1.2e-10 Score=116.33 Aligned_cols=125 Identities=17% Similarity=0.085 Sum_probs=99.4
Q ss_pred HhhHHHhhcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh--cCeeEEcCCccccc
Q 010211 267 DKDWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA--SDGAMVARGDLGAE 344 (515)
Q Consensus 267 ekD~~dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~--sDgImIgrgDLg~e 344 (515)
+.-.+||+..++.|+|+|.+|+|++++++..+. ++.++++|||++|+.|+++|+.. +|++++|+.||+.+
T Consensus 71 ~~~~~dl~~~~~~g~~gi~lPKv~s~~~v~~~~--------~~~i~~~IET~~~v~~~~eIaa~~~v~~l~~G~~Dl~~~ 142 (273)
T 1u5h_A 71 ADQARDLEALAGTAYTTVMLPKAESAAQVIELA--------PRDVIALVETARGAVCAAEIAAADPTVGMMWGAEDLIAT 142 (273)
T ss_dssp HHHHHHHHHHHTSCCCEEEETTCCCHHHHHTTT--------TSEEEEEECSHHHHHTHHHHHHSTTEEEEEECHHHHHHH
T ss_pred hHHHHHHHHHHhcCCCEEEeCCCCCHHHHHHHh--------hCCEEEEEeCHHHHHhHHHHhcCCCCcEEEecHHHHHHH
Confidence 344578888888999999999999999997653 78899999999999999999976 89999999999999
Q ss_pred CCCC-----------CHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHH-HhHHHHHHHhCCcEEeec
Q 010211 345 LPIE-----------DVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGADAVMLS 406 (515)
Q Consensus 345 lg~e-----------~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAE-v~DvanaV~~G~D~vmLs 406 (515)
+|.. .+..+..+++.+|+++|++++- + + +......+- ..+...+...|+|+-+.-
T Consensus 143 lG~~~~~~~~~~~~~~~~~a~~~iv~aaraaG~~aid-~-----v-~~~~~d~~gl~~~~~~~~~~Gf~Gk~~I 209 (273)
T 1u5h_A 143 LGGSSSRRADGAYRDVARHVRSTILLAASAFGRLALD-A-----V-HLDILDVEGLQEEARDAAAVGFDVTVCI 209 (273)
T ss_dssp HTCSCSBCTTSCBCHHHHHHHHHHHHHHHHTTCEEEE-C-----C-CSCTTCHHHHHHHHHHHHHHTCSEEEES
T ss_pred hCCCCCCCccccccHHHHHHHHHHHHHHHHcCCCccc-C-----C-cCCCCCHHHHHHHHHHHHhCCCCceeec
Confidence 9862 2778889999999999998853 2 0 111111111 345677889999987764
No 21
>2hwg_A Phosphoenolpyruvate-protein phosphotransferase; enzyme I, phosphoenolpyruvate:sugar phosphotransferase system, PTS; HET: NEP; 2.70A {Escherichia coli} PDB: 2kx9_A 2xdf_A 2l5h_A
Probab=99.14 E-value=8.4e-11 Score=128.75 Aligned_cols=133 Identities=13% Similarity=0.062 Sum_probs=109.0
Q ss_pred CCCCHhhHHHhhcchhcCCcEEEecccCCHHHHHHHHHHHHh-------c----CCCceEEEEecChhhhhcHHHHHhhc
Q 010211 263 PSITDKDWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKS-------C----NADIHVIVKIESADSIPNLHSIISAS 331 (515)
Q Consensus 263 p~ltekD~~dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~~-------~----~~~i~IIaKIEt~~aveNldeIl~~s 331 (515)
|.+-..+.+.|..+.+.|...|.+|+|.++++++.+++.+.. . ++++.+.++||++.|+.++|+|++++
T Consensus 367 p~if~~QlrAi~rA~~~G~~~Im~PmV~t~~E~~~a~~~v~~~~~~l~~~G~~~~~~~~vg~MIE~P~a~~~ad~ia~~v 446 (575)
T 2hwg_A 367 REILRDQLRAILRASAFGKLRIMFPMIISVEEVRALRKEIEIYKQELRDEGKAFDESIEIGVMVETPAAATIARHLAKEV 446 (575)
T ss_dssp HHHHHHHHHHHHHHTTSSCEEEEESSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCTTCEEEEEECSHHHHHTHHHHHTTC
T ss_pred hHHHHHHHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEECcHHHHHHHHHHHHhC
Confidence 344445567788888889999999999999998888877642 1 24688999999999999999999999
Q ss_pred CeeEEcCCcccc----------cCCC------CCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHH
Q 010211 332 DGAMVARGDLGA----------ELPI------EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIA 395 (515)
Q Consensus 332 DgImIgrgDLg~----------elg~------e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~Dvana 395 (515)
|+++||++||+. .++. +.|..+.++++++|+++|||++++.+ ..+.|..++ .+
T Consensus 447 Df~siGtNDLtqy~la~dR~~~~l~~~~dp~~paVl~li~~vv~aa~~~g~~vgvCGe------~agdp~~~~-----~l 515 (575)
T 2hwg_A 447 DFFSIGTNDLTQYTLAVDRGNDMISHLYQPMSPSVLNLIKQVIDASHAEGKWTGMCGE------LAGDERATL-----LL 515 (575)
T ss_dssp SEEEECHHHHHHHHHTCCTTCGGGGGGCCSSSHHHHHHHHHHHHHHHHTTCEEEECST------TTTCTTTHH-----HH
T ss_pred CEEEECHHHHHHHHhCcCCCccccccccCCCCHHHHHHHHHHHHHHHHhCCeEEEeCC------CCCCHHHHH-----HH
Confidence 999999999999 5543 56889999999999999999999774 334665444 67
Q ss_pred HHhCCcEEeec
Q 010211 396 VREGADAVMLS 406 (515)
Q Consensus 396 V~~G~D~vmLs 406 (515)
+..|.|.+-.+
T Consensus 516 ~~lG~~~~S~~ 526 (575)
T 2hwg_A 516 LGMGLDEFSMS 526 (575)
T ss_dssp HHTTCCEEEEC
T ss_pred HHCCCCEEEEC
Confidence 88999996555
No 22
>3qqw_A Putative citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 2.44A {Ralstonia eutropha}
Probab=99.10 E-value=2e-10 Score=118.06 Aligned_cols=131 Identities=13% Similarity=0.049 Sum_probs=99.2
Q ss_pred hhHHHhhcchhc---CCcEEEecccCCHHHHHHHHHHHHhc----C--CCceEEEEecChhhhhcHHHHHhh--cCeeEE
Q 010211 268 KDWEDIKFGVDN---QVDFYAVSFVKDAKVVHELKDYLKSC----N--ADIHVIVKIESADSIPNLHSIISA--SDGAMV 336 (515)
Q Consensus 268 kD~~dI~~al~~---gvD~ValSfVrsa~dv~~vr~~l~~~----~--~~i~IIaKIEt~~aveNldeIl~~--sDgImI 336 (515)
+-.+||...++. |+|+|.+|+|++++|+..+.+++... | ..+.++++|||++|+.|+++|++. +|++++
T Consensus 96 ~~~~DL~av~~~~~~g~dgI~LPKvesa~dv~~~~~~l~~~e~~~G~~~~i~l~~~IET~~gv~~~~eIaa~~rv~~L~~ 175 (332)
T 3qqw_A 96 AWRQDVDIIVNGAGGRLAYITVPKATNSGQVAEVIRYIGDVAKRAGLDKPVPVHVLIETHGALRDVFQIAELPNIEVLDF 175 (332)
T ss_dssp THHHHHHHHHHHSTTCCCCEEECCCCSHHHHHHHHHHHHHHHHHTTCSSCCCEEEEECSHHHHHTHHHHTTSTTEEEEEE
T ss_pred HHHHHHHHHHhhcccCCCEEEeCCCCCHHHHHHHHHHHHHHHHhcCCCCCeEEEEEecCHHHHHHHHHHhcCcCCCEEEE
Confidence 344566655554 99999999999999999988887543 2 468899999999999999999965 899999
Q ss_pred cCCcccccCCCC---------------CHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHH-HhHHHHHH-HhC
Q 010211 337 ARGDLGAELPIE---------------DVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAV-REG 399 (515)
Q Consensus 337 grgDLg~elg~e---------------~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAE-v~DvanaV-~~G 399 (515)
|++||+.++|.. .+..+..+++.+|+++|++++- + + ........- ..+...+. ..|
T Consensus 176 G~~DL~~~lg~~~~~~~~~~~g~~~~p~l~~ar~~vv~AAraaGi~~id-~-----v-~~d~~D~~gl~~~~~~~~~~lG 248 (332)
T 3qqw_A 176 GLMDFVSGHHGAIPAAAMRSPGQFEHALLVRAKADMVAAALANGIVPAH-N-----V-CLNLKDAEVIASDACRARNEFG 248 (332)
T ss_dssp CHHHHHHTTTTCSCGGGGSTTGGGTSHHHHHHHHHHHHHHHHTTCEEEE-C-----C-CSCSSCHHHHHHHHHHHHHHHC
T ss_pred cHHHHHHHhCCCccccccCCCCcccCHHHHHHHHHHHHHHHHhCCCccc-C-----C-cccccCHHHHHHHHHHHHHhCC
Confidence 999999999762 2667889999999999999853 1 1 111111111 34455666 689
Q ss_pred CcEEee
Q 010211 400 ADAVML 405 (515)
Q Consensus 400 ~D~vmL 405 (515)
.|+-+.
T Consensus 249 f~Gk~~ 254 (332)
T 3qqw_A 249 FLRMWS 254 (332)
T ss_dssp CCEEEE
T ss_pred CCcccc
Confidence 997665
No 23
>2wqd_A Phosphoenolpyruvate-protein phosphotransferase; kinase, cytoplasm, transport, magnesium, PEP- utilising enzyme, phosphotransferase system; 2.40A {Staphylococcus aureus} PDB: 2hro_A
Probab=99.10 E-value=1.3e-10 Score=127.18 Aligned_cols=129 Identities=14% Similarity=0.042 Sum_probs=106.0
Q ss_pred HhhHHHhhcchhcCCcEEEecccCCHHHHHHHHHHHHh-----------cCCCceEEEEecChhhhhcHHHHHhhcCeeE
Q 010211 267 DKDWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKS-----------CNADIHVIVKIESADSIPNLHSIISASDGAM 335 (515)
Q Consensus 267 ekD~~dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~~-----------~~~~i~IIaKIEt~~aveNldeIl~~sDgIm 335 (515)
..+.+.|..+.+.|...|.+|+|.++++++.+++.+.. .++++.+.++||++.|+.|+|+|++++|+++
T Consensus 373 ~~QlrAi~rA~~~G~~~Im~PmV~s~~E~~~a~~~v~~~~~~l~~~G~~~~~~~~vg~MIE~P~a~~~ad~ia~~vDf~s 452 (572)
T 2wqd_A 373 RPQLRALLRASVYGKLNIMFPMVATINEFREAKAILLEEKENLKNEGHDISDDIELGIMVEIPATAALADVFAKEVDFFS 452 (572)
T ss_dssp HHHHHHHHHHTTTSCEEEEESCCCSHHHHHHHHHHHHHHHHHHHHHTCCCCSCCEEEEEECCHHHHHTHHHHHHHCSEEE
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEEccHHHHHHHHHHHHhCCEEE
Confidence 34456677888889999999999999999888777631 2346899999999999999999999999999
Q ss_pred EcCCccccc-CCC---------------CCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhC
Q 010211 336 VARGDLGAE-LPI---------------EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREG 399 (515)
Q Consensus 336 IgrgDLg~e-lg~---------------e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G 399 (515)
||++||+.. +|. +.|..+.++++++|+++|||++++.+ ..+.|..++ .++..|
T Consensus 453 iGtNDLtQ~~lg~dR~~~~v~~~~dp~~paVl~li~~vv~aa~~~g~~vgiCGe------~agdp~~~~-----~l~~lG 521 (572)
T 2wqd_A 453 IGTNDLIQYTLAADRMSERVSYLYQPYNPSILRLVKQVIEASHKEGKWTGMCGE------MAGDETAIP-----LLLGLG 521 (572)
T ss_dssp ECHHHHHHHHHTCCSSSGGGGGGCCTTCHHHHHHHHHHHHHHHHTTCEEEECSG------GGGCTTTHH-----HHHHHT
T ss_pred ECHHHHHHHHhccCCCccccccccCCCCHHHHHHHHHHHHHHHHhCCeEEEeCC------ccCCHHHHH-----HHHHCC
Confidence 999999943 221 46889999999999999999999775 224666554 678899
Q ss_pred CcEEeec
Q 010211 400 ADAVMLS 406 (515)
Q Consensus 400 ~D~vmLs 406 (515)
.|.+..+
T Consensus 522 ~~~~S~~ 528 (572)
T 2wqd_A 522 LDEFSMS 528 (572)
T ss_dssp CCEEEEC
T ss_pred CCEEEec
Confidence 9998766
No 24
>3r4i_A Citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.24A {Burkholderia xenovorans}
Probab=99.00 E-value=1.1e-09 Score=112.82 Aligned_cols=129 Identities=10% Similarity=0.123 Sum_probs=94.8
Q ss_pred HHHhhcchh---cCCcEEEecccCCHHHHHHHHHHHHhc------CCCceEEEEecChhhhhcHHHHHhh--cCeeEEcC
Q 010211 270 WEDIKFGVD---NQVDFYAVSFVKDAKVVHELKDYLKSC------NADIHVIVKIESADSIPNLHSIISA--SDGAMVAR 338 (515)
Q Consensus 270 ~~dI~~al~---~gvD~ValSfVrsa~dv~~vr~~l~~~------~~~i~IIaKIEt~~aveNldeIl~~--sDgImIgr 338 (515)
.+||...++ .|.|+|.+|+|++++|+..+.+++... +..+.++++|||++|+.|+++|++. +|++++|+
T Consensus 97 ~~DL~al~~~~~~g~~~I~LPKves~~dv~~~~~~l~~~e~~~G~~~~~~l~~~IET~~gv~~~~eIAa~~rv~~L~~G~ 176 (339)
T 3r4i_A 97 RDDVRLILRAAKRAPAYITLPKIRHVHDAAEMVAFIEATRRELGIAQPVPVQLLVETHGALTRVFDLAALPGVEALSFGL 176 (339)
T ss_dssp HHHHHHHHHHCSSCCSCEEECC-CCHHHHHHHHHHHHHHHHHTTCSSCCCEEEEECSHHHHHTHHHHHTCTTEEEEEECH
T ss_pred HHHHHHhhhhccCCCCEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeccHHHHHhHHHHHcCcCCCEEEECH
Confidence 455555444 389999999999999999988877542 2468899999999999999999954 89999999
Q ss_pred CcccccCCCC---------------CHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHH-HhHHHHHH-HhCCc
Q 010211 339 GDLGAELPIE---------------DVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAV-REGAD 401 (515)
Q Consensus 339 gDLg~elg~e---------------~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAE-v~DvanaV-~~G~D 401 (515)
+||+.++|.. .+..+..+++.+|+++|++++-. . ....-..+- ..+...+. ..|.|
T Consensus 177 ~DL~~~lg~~~~~~~~~~~~~~~~p~~~~a~~~iv~AAraaGi~~id~------v-~~d~~D~~gl~~~~~~~~~~lGf~ 249 (339)
T 3r4i_A 177 MDFVSAHDGAIPDTAMRSPGQFDHPLVRRAKLEISAACHAYGKVPSHN------V-STEVRDMSVVANDAARARNEFGYT 249 (339)
T ss_dssp HHHHHTTTTSSCGGGGSTTHHHHSHHHHHHHHHHHHHHHHTTCEEEEC------C-CCCSSCHHHHHHHHHHHHHTTCCS
T ss_pred HHHHHHhCCCcCccccCCCccccCHHHHHHHHHHHHHHHHcCCCCccC------C-CcCCCChHHHHHHHHHHHHhCCCC
Confidence 9999999852 15678899999999999998531 1 111111111 22344554 68999
Q ss_pred EEee
Q 010211 402 AVML 405 (515)
Q Consensus 402 ~vmL 405 (515)
+-+.
T Consensus 250 Gk~~ 253 (339)
T 3r4i_A 250 RMWS 253 (339)
T ss_dssp EEEE
T ss_pred ccee
Confidence 7654
No 25
>3oyz_A Malate synthase; TIM barrel, transferase; HET: ACO; 1.95A {Haloferax volcanii} PDB: 3oyx_A* 3pug_A
Probab=98.83 E-value=1e-08 Score=108.28 Aligned_cols=133 Identities=10% Similarity=0.064 Sum_probs=103.6
Q ss_pred CHh-hHHHhhcchh------cCCcEEEecccCCHHHHHHHHHHHHhc----C---CCceEEEEecChhh---hhcHHHHH
Q 010211 266 TDK-DWEDIKFGVD------NQVDFYAVSFVKDAKVVHELKDYLKSC----N---ADIHVIVKIESADS---IPNLHSII 328 (515)
Q Consensus 266 tek-D~~dI~~al~------~gvD~ValSfVrsa~dv~~vr~~l~~~----~---~~i~IIaKIEt~~a---veNldeIl 328 (515)
|.+ ..+||...+. .++|+|.+|++++++++..+.+++... | ..+.++++|||++| +.|+++|+
T Consensus 94 T~~~~~~DL~al~~~~~~a~~~~dgIvLPKvesa~dV~~l~~~L~~~E~~~Gl~~G~i~lialIETa~g~~~L~na~eIA 173 (433)
T 3oyz_A 94 TRYQGFQHMLDITDPERGAVEHIHGFVIPEVGGIDDWKKADEFFTIVEHEHGLDEGSLAMSVIIESGEAELAMGDLRDEM 173 (433)
T ss_dssp HHHHHHHHHHHHTCGGGSCGGGCCEEEECSCCSHHHHHHHHHHHHHHHHHTTCCTTCSEEEEEECSHHHHHHGGGHHHHH
T ss_pred ChhccHHHHHHHhccccccccCCCEEEeCCCCCHHHHHHHHHHHHHHHHHhCCCCCCeEEEEEEeChhHHHHHHHHHHHH
Confidence 344 4677776665 689999999999999999988877542 2 26889999999999 99999999
Q ss_pred hh-------cCeeEEcCCcccccCCCC-------CHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHH-HhHHH
Q 010211 329 SA-------SDGAMVARGDLGAELPIE-------DVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIA 393 (515)
Q Consensus 329 ~~-------sDgImIgrgDLg~elg~e-------~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAE-v~Dva 393 (515)
.+ ++++++|+.||+.++|.. .+..+..+++.+|+++|++++-. + +...-..+- ..+..
T Consensus 174 aasr~~~pRV~gL~~G~~DLsasLG~~~~~~~~~el~~ARs~IVlAARAaGi~aIDg------V-~~di~D~egL~~ea~ 246 (433)
T 3oyz_A 174 GKPTNNLERLFLLVDGEVDYTKDMRAMTPTGELPAWPELRHNTSRGASAAGCVAVDG------P-YDDIRDVEGYRERMT 246 (433)
T ss_dssp HCTTCCGGGEEEEEECHHHHHHHHTCCCTTCCCCCCHHHHHHHHHHHHHHTCEEEEC------C-CCCTTCHHHHHHHHH
T ss_pred hhhccCCCCeEEEEECHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHhCCCcccc------c-ccCCCCHHHHHHHHH
Confidence 75 589999999999999872 47888999999999999987541 1 111111111 44567
Q ss_pred HHHHhCCcEEee
Q 010211 394 IAVREGADAVML 405 (515)
Q Consensus 394 naV~~G~D~vmL 405 (515)
.+...|+|+-+.
T Consensus 247 ~ar~lGF~GK~~ 258 (433)
T 3oyz_A 247 DNQAKGMLGIWS 258 (433)
T ss_dssp HHHTTTCCEEEE
T ss_pred HHHhCCCCceEe
Confidence 888999998776
No 26
>1vbg_A Pyruvate,orthophosphate dikinase; transferase, maize, riken structural genomics/proteomics INI RSGI, structural genomics; 2.30A {Zea mays} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1vbh_A*
Probab=98.58 E-value=7.2e-08 Score=110.11 Aligned_cols=116 Identities=16% Similarity=0.105 Sum_probs=95.4
Q ss_pred CCc---EEEecccCCHHHHHHHHHHHHhc--------C--CCceEEEEecChhhhhcHHHHHhhcCeeEEcCCccc-ccC
Q 010211 280 QVD---FYAVSFVKDAKVVHELKDYLKSC--------N--ADIHVIVKIESADSIPNLHSIISASDGAMVARGDLG-AEL 345 (515)
Q Consensus 280 gvD---~ValSfVrsa~dv~~vr~~l~~~--------~--~~i~IIaKIEt~~aveNldeIl~~sDgImIgrgDLg-~el 345 (515)
|.+ .|.+|+|+++++++.+++++... | .++.+.++||++.|+.|+|+|++.+|++.||..||+ ..+
T Consensus 701 G~~~~~~ImiP~V~t~~E~~~~~~~i~~~~~~~~~~~G~~~~~~vg~MIEtP~a~l~adeIA~~vDf~siGtNDLtQ~~l 780 (876)
T 1vbg_A 701 GVQVFPEIMVPLVGTPQELGHQVTLIRQVAEKVFANVGKTIGYKVGTMIEIPRAALVADEIAEQAEFFSFGTNDLTQMTF 780 (876)
T ss_dssp TCCCEEEEEECSCCSHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEEECSHHHHHTHHHHTTTCSEEEECHHHHHHHHH
T ss_pred CCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEEccHHHHHHHHHHHHhCCEEEECHHHHHHHHh
Confidence 755 68999999999999988766421 3 358899999999999999999999999999999999 434
Q ss_pred CC----------------------------CCHHHHHHHHHHHHHhc--CCcEEEEeccccccccCCCcChHHHhHHHHH
Q 010211 346 PI----------------------------EDVPLLQEDIIRRCRSM--QKPVIVATNMLESMIDHPTPTRAEVSDIAIA 395 (515)
Q Consensus 346 g~----------------------------e~v~~aqk~Ii~~c~~a--GKPvivATqmLeSMi~~~~PtrAEv~Dvana 395 (515)
|+ +.|..+.++++++|+++ ||||+++.| ..+.|.-++ -+
T Consensus 781 g~dR~~~~~~~~~~~~~~i~~~dp~~~ld~paV~~li~~~~~~~~~~~~g~~vgiCGe------~~gdP~~~~-----~l 849 (876)
T 1vbg_A 781 GYSRDDVGKFIPVYLAQGILQHDPFEVLDQRGVGELVKFATERGRKARPNLKVGICGE------HGGEPSSVA-----FF 849 (876)
T ss_dssp TCCTTTGGGTHHHHHHTTSCSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEEESG------GGGSHHHHH-----HH
T ss_pred CCCCCchhhhHHHHhhcccccCCcccccchHHHHHHHHHHHHHHHHhCCCCEEEEcCC------cCCCHHHHH-----HH
Confidence 53 45788899999999998 999999886 234665554 56
Q ss_pred HHhCCcEEeec
Q 010211 396 VREGADAVMLS 406 (515)
Q Consensus 396 V~~G~D~vmLs 406 (515)
+..|.|.+-+|
T Consensus 850 ~~~Gl~~vS~s 860 (876)
T 1vbg_A 850 AKAGLDYVSCS 860 (876)
T ss_dssp HHTTCSEEEEC
T ss_pred HHcCCCEEEEC
Confidence 88999998776
No 27
>1kbl_A PPDK, pyruvate phosphate dikinase; transferase, phosphotransferase; 1.94A {Clostridium symbiosum} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1kc7_A* 1dik_A 1ggo_A 1jde_A 2dik_A 2r82_A 2fm4_A
Probab=98.44 E-value=2e-07 Score=106.39 Aligned_cols=116 Identities=17% Similarity=0.181 Sum_probs=95.2
Q ss_pred CCc---EEEecccCCHHHHHHHHHHHHhc--------C--CCceEEEEecChhhhhcHHHHHhhcCeeEEcCCccc-ccC
Q 010211 280 QVD---FYAVSFVKDAKVVHELKDYLKSC--------N--ADIHVIVKIESADSIPNLHSIISASDGAMVARGDLG-AEL 345 (515)
Q Consensus 280 gvD---~ValSfVrsa~dv~~vr~~l~~~--------~--~~i~IIaKIEt~~aveNldeIl~~sDgImIgrgDLg-~el 345 (515)
|.+ .|.+|+|++++++..+++.+.+. + .++.+.++|||+.|+.++++|++.+|++.||.+||+ ..+
T Consensus 695 G~~~~~~ImiP~V~t~~E~~~~~~~i~~~~~~~~~~~g~~~~~~vg~MIEtP~a~l~ad~iA~~vdf~siGtNDLtQ~~l 774 (873)
T 1kbl_A 695 GIDIVPEIMIPLVGEKKELKFVKDVVVEVAEQVKKEKGSDMQYHIGTMIEIPRAALTADAIAEEAEFFSFGTNDLTQMTF 774 (873)
T ss_dssp CCCCCCEEEECSCCSHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEEECSHHHHHTHHHHTTTCSEEEECHHHHHHHHH
T ss_pred CCCCCEEEEEecCCCHHHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEEccHHHHHHHHHHHHhCCEEEECHHHHHHHHh
Confidence 754 68999999999999988776422 3 358899999999999999999999999999999999 444
Q ss_pred CC----------------------------CCHHHHHHHHHHHHHhc--CCcEEEEeccccccccCCCcChHHHhHHHHH
Q 010211 346 PI----------------------------EDVPLLQEDIIRRCRSM--QKPVIVATNMLESMIDHPTPTRAEVSDIAIA 395 (515)
Q Consensus 346 g~----------------------------e~v~~aqk~Ii~~c~~a--GKPvivATqmLeSMi~~~~PtrAEv~Dvana 395 (515)
|+ +-|..+.+.++++|+++ |+||+++.| ..+.|.-++ -+
T Consensus 775 g~dR~~~~~~~~~~~~~~i~~~dp~~~ld~paV~~li~~~~~~~~~~~~g~~vgiCGe------~~gdP~~~~-----~l 843 (873)
T 1kbl_A 775 GFSRDDAGKFLDSYYKAKIYESDPFARLDQTGVGQLVEMAVKKGRQTRPGLKCGICGE------HGGDPSSVE-----FC 843 (873)
T ss_dssp TCCHHHHHHHHHHHHHTTSCSSCTTTSCCTTTHHHHHHHHHHHHHHHCTTCEEEECSG------GGGSHHHHH-----HH
T ss_pred CCCCCchhhhHHHHHhccccccCchhhhchHHHHHHHHHHHHHHHHhCCCCeEEECCC------CCCCHHHHH-----HH
Confidence 54 35778899999999997 999999886 234565544 56
Q ss_pred HHhCCcEEeec
Q 010211 396 VREGADAVMLS 406 (515)
Q Consensus 396 V~~G~D~vmLs 406 (515)
+..|.|.+-.|
T Consensus 844 ~~~Gl~~vS~s 854 (873)
T 1kbl_A 844 HKVGLNYVSCS 854 (873)
T ss_dssp HHTTCSEEEEC
T ss_pred HHcCCCEEEEC
Confidence 88899998776
No 28
>1h6z_A Pyruvate phosphate dikinase; transferase, tropical parasite, trypanosome; 3.00A {Trypanosoma brucei} PDB: 2x0s_A
Probab=97.67 E-value=0.00013 Score=83.78 Aligned_cols=136 Identities=15% Similarity=0.095 Sum_probs=104.6
Q ss_pred cCCCCCCHhhHHHhhcch----hcCCc---EEEecccCCHHHHHHHHHHHH--------hcC--CCceEEEEecChhhhh
Q 010211 260 ANLPSITDKDWEDIKFGV----DNQVD---FYAVSFVKDAKVVHELKDYLK--------SCN--ADIHVIVKIESADSIP 322 (515)
Q Consensus 260 ~~lp~ltekD~~dI~~al----~~gvD---~ValSfVrsa~dv~~vr~~l~--------~~~--~~i~IIaKIEt~~ave 322 (515)
+..|.+-+-+.+.|..|. +.|.+ .|.+|||++.++++.+++.+. +.| .++.+-.+||+|.|+-
T Consensus 697 l~~peif~~QlrAi~rAa~~~~~~G~~~~~~IMiPmV~t~~E~~~~~~~i~~~~~el~~e~g~~~~~~vG~MiEvPsaal 776 (913)
T 1h6z_A 697 ITYPEIYNMQVRAIIEAAIAVSEEGSSVIPEIMVPLVGKKEELSLIREEVVKTAEAVITKSGKRVHYTVGTMIEVPRAAV 776 (913)
T ss_dssp HHSTTHHHHHHHHHHHHHHHHHTTTCCCCEEEEECCCCSHHHHHHHHHHHHHHHHHHHHHSCSCCCCEEEEEECSHHHHH
T ss_pred CCChHHHHHHHHHHHHHHHHHHhcCCCCCeEEEecCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecchHHHH
Confidence 345666666667675542 23644 789999999999999888753 223 2578999999999999
Q ss_pred cHHHHHhhcCeeEEcCCcccccC-CC----------------------------CCHHHHHHHHHHHHHh--cCCcEEEE
Q 010211 323 NLHSIISASDGAMVARGDLGAEL-PI----------------------------EDVPLLQEDIIRRCRS--MQKPVIVA 371 (515)
Q Consensus 323 NldeIl~~sDgImIgrgDLg~el-g~----------------------------e~v~~aqk~Ii~~c~~--aGKPvivA 371 (515)
..|+|++.+|++-||-.||..-+ |+ +-|..+.+.++++|++ .|+||+++
T Consensus 777 ~ad~ia~~~DFfSiGTNDLTQ~tlg~dRd~~~~~l~~y~~~~i~~~dPf~~ld~paV~~lI~~ai~~a~~~~~g~~vgIC 856 (913)
T 1h6z_A 777 TADSIAQKADFFSFGTNDLTQMGCGFSRDDAGPFLRHYGNLGIYAQDPFQSIDQEGIGELVRIAVTKGRRVKPMLKMGIC 856 (913)
T ss_dssp THHHHTTTCSEEEECTTHHHHHHHTCCGGGCHHHHTTTTTTCSSSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEEC
T ss_pred HHHHHHHhCCEEEEChHHHHHHHhccCCCchHHHHHHHHhccccccCcccccChHHHHHHHHHHHHHHHhcCCCCEEEEc
Confidence 99999999999999999987521 22 4567888999999997 69999998
Q ss_pred eccccccccCCCcChHHHhHHHHHHHhCCcEEeec
Q 010211 372 TNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (515)
Q Consensus 372 TqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs 406 (515)
.|+ .+.|.-++ -++..|.|.+-+|
T Consensus 857 GE~------~gdP~~~~-----~l~~~Gid~vS~s 880 (913)
T 1h6z_A 857 GEH------GGDPATIG-----FCHKVGLDYVSCS 880 (913)
T ss_dssp SGG------GGCHHHHH-----HHHHHTCSEEEEC
T ss_pred CCC------CCCHHHHH-----HHHHcCCCEEEEC
Confidence 863 34565554 6688899998887
No 29
>3cux_A Malate synthase; TIM barrel, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.70A {Bacillus anthracis}
Probab=97.58 E-value=0.00013 Score=79.19 Aligned_cols=125 Identities=16% Similarity=0.189 Sum_probs=88.3
Q ss_pred hcCCcEEEecccCCHHHHHHHHHHHHhc----C---CCceEEEEecChhhhhcHHHHHhh----cCeeEEcCCcccccCC
Q 010211 278 DNQVDFYAVSFVKDAKVVHELKDYLKSC----N---ADIHVIVKIESADSIPNLHSIISA----SDGAMVARGDLGAELP 346 (515)
Q Consensus 278 ~~gvD~ValSfVrsa~dv~~vr~~l~~~----~---~~i~IIaKIEt~~aveNldeIl~~----sDgImIgrgDLg~elg 346 (515)
..|+ +|.+|++++++++..+.+.+... | ..+++.+.|||+.|+-|++||+.. +.|+..|+.|+..+++
T Consensus 202 ~~gp-yi~LPK~es~~Ev~~~~~lf~~~E~~lGlp~gtIki~vlIET~~a~~n~~eI~~a~~~rv~gLn~G~~Dy~~s~i 280 (528)
T 3cux_A 202 GSGP-YFYLPKMESYLEARLWNDVFVFAQKYIGIPNGTIKATVLLETIHASFEMDEILYELKDHSAGLNCGRWDYIFSFL 280 (528)
T ss_dssp TCCC-EEEECCCCSHHHHHHHHHHHHHHHHHHTCCTTCCEEEEEECSHHHHTSHHHHHHHTGGGEEEEEECSHHHHHHHH
T ss_pred CCCC-EEEccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEEeCCHHHHHhHHHHHHhccCceeEEecCHHHHHHHhh
Confidence 3476 99999999999999888776432 2 368999999999999999999965 5699999999988774
Q ss_pred C------C--------------CHHHHHHHHHHHHHhcCCcEEEEeccccccccC-CCcC--h----HHHhHHHHHHHhC
Q 010211 347 I------E--------------DVPLLQEDIIRRCRSMQKPVIVATNMLESMIDH-PTPT--R----AEVSDIAIAVREG 399 (515)
Q Consensus 347 ~------e--------------~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~-~~Pt--r----AEv~DvanaV~~G 399 (515)
. + -+....+.++.+|+++|++.|-. | -.++-. .+|. . .=..|-......|
T Consensus 281 ~t~~~~~~~vlpdR~~v~~~~p~~~ay~~~lV~ac~a~G~~aIgG--m-~a~ip~~~D~~~n~~~~~~~~~dk~~~~~~G 357 (528)
T 3cux_A 281 KAFRNHNEFLLPDRAQVTMTAPFMRAYSLKVIQTCHRRNAPAIGG--M-AAQIPIKNNPEANEAAFEKVRADKEREALDG 357 (528)
T ss_dssp HHTTTCTTCCCCCGGGCCTTSHHHHHHHHHHHHHHHHTTCCEEC----------------------CHHHHHHHHHHHHT
T ss_pred hhccCCccccchhhhhcccccHHHHHHHHHHHHHHHHcCCCCccc--c-cccCcCcCChHHHHHHHHHHHHHHHHHHhCC
Confidence 1 1 14455677889999999987641 1 011100 1221 0 1144556778899
Q ss_pred CcEEeec
Q 010211 400 ADAVMLS 406 (515)
Q Consensus 400 ~D~vmLs 406 (515)
+|+-+.-
T Consensus 358 fdGkwvi 364 (528)
T 3cux_A 358 HDGTWVA 364 (528)
T ss_dssp CSBEEES
T ss_pred CCccccc
Confidence 9999884
No 30
>3cuz_A MSA, malate synthase A; TIM barrel, cytoplasm, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.04A {Escherichia coli} PDB: 3cv1_A 3cv2_A*
Probab=97.56 E-value=0.00038 Score=75.60 Aligned_cols=121 Identities=12% Similarity=0.134 Sum_probs=87.6
Q ss_pred CcEEEecccCCHHHHHHHHHHHHhc----C---CCceEEEEecChhhhhcHHHHHhh----cCeeEEcCCcccccCCC--
Q 010211 281 VDFYAVSFVKDAKVVHELKDYLKSC----N---ADIHVIVKIESADSIPNLHSIISA----SDGAMVARGDLGAELPI-- 347 (515)
Q Consensus 281 vD~ValSfVrsa~dv~~vr~~l~~~----~---~~i~IIaKIEt~~aveNldeIl~~----sDgImIgrgDLg~elg~-- 347 (515)
.++|.+|++++++++..+.+.+... | ..+++++.|||+.|+.|++||+.. +.|+..|+.|+..++..
T Consensus 207 g~~i~LPK~es~~Ev~~~~~~f~~~E~~lGlp~gtiki~vlIET~~a~~n~~eIa~al~~rv~gLn~G~~Dy~~s~i~~~ 286 (532)
T 3cuz_A 207 GPYFYLPKTQSWQEAAWWSEVFSYAEDRFNLPRGTIKATLLIETLPAVFQMDEILHALRDHIVGLNCGRWDYIFSYIKTL 286 (532)
T ss_dssp CCEEEECCCCCHHHHHHHHHHHHHHHHHTTCCTTCSEEEEECCSHHHHTSHHHHHHHTTTTEEEEECCSHHHHHHHHHHT
T ss_pred CCeEEccCCCCHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeccHHHHHhHHHHHHhccCCceEEEcCHHHHHHHHHhhc
Confidence 3999999999999999888777421 2 357899999999999999999975 67999999999877621
Q ss_pred --------C---------CHHHHHHHHH-HHHHhcCCcEEE--EeccccccccCCCcCh--H----HHhHHHHHHHhCCc
Q 010211 348 --------E---------DVPLLQEDII-RRCRSMQKPVIV--ATNMLESMIDHPTPTR--A----EVSDIAIAVREGAD 401 (515)
Q Consensus 348 --------e---------~v~~aqk~Ii-~~c~~aGKPviv--ATqmLeSMi~~~~Ptr--A----Ev~DvanaV~~G~D 401 (515)
+ .+..+..+++ .+|+++|+..|- +. ++. ..+|.. + =..|-......|+|
T Consensus 287 ~~~~~~~lpdr~~~~~~~~~l~Ay~~llv~ac~a~G~~aIdGm~a-~~p----~kD~e~~~~~~~~l~~dk~~~~~~Gfd 361 (532)
T 3cuz_A 287 KNYPDRVLPDRQAVTMDKPFLNAYSRLLIKTCHKRGAFAMGGMAA-FIP----SKDEEHNNQVLNKVKADKSLEANNGHD 361 (532)
T ss_dssp TTCGGGCCCCGGGCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEC-BCC----CSSGGGCHHHHHHHHHHHHHHHHHTCS
T ss_pred ccCCCccCccccccccchHHHHHHHHHHHHHHHHcCCCCccCccc-cCC----CCChhHHHHHHHHHHHHHHHHHHCCCC
Confidence 1 1344555555 999999998765 22 111 112222 1 13455677889999
Q ss_pred EEeec
Q 010211 402 AVMLS 406 (515)
Q Consensus 402 ~vmLs 406 (515)
+-+.-
T Consensus 362 Gkwvi 366 (532)
T 3cuz_A 362 GTWIA 366 (532)
T ss_dssp EEEES
T ss_pred ccccC
Confidence 98874
No 31
>1p7t_A MSG, malate synthase G; TIM barrel, glyoxylate cycle, acetyl-COA, cysteine-sulfenic lyase; HET: ACO PG4; 1.95A {Escherichia coli str} SCOP: c.1.13.1 PDB: 1y8b_A 1d8c_A* 2jqx_A
Probab=97.44 E-value=0.0002 Score=79.54 Aligned_cols=130 Identities=14% Similarity=0.076 Sum_probs=93.4
Q ss_pred HHHhhcchh--cCCcEEEecccCCHHHHHHHHHHHHhc----C---CCceEEEEecChhhhhcHHHHHhh----cCeeEE
Q 010211 270 WEDIKFGVD--NQVDFYAVSFVKDAKVVHELKDYLKSC----N---ADIHVIVKIESADSIPNLHSIISA----SDGAMV 336 (515)
Q Consensus 270 ~~dI~~al~--~gvD~ValSfVrsa~dv~~vr~~l~~~----~---~~i~IIaKIEt~~aveNldeIl~~----sDgImI 336 (515)
..|++..+. .|.++|.+|++++++++..+.+.+... + ..+++.++|||+.|+-|++||+.. +.|+..
T Consensus 372 ~hDl~al~~sg~G~~yIvLPKmespeEV~~~~~lf~~~E~~lGlp~gTIKi~vLIET~ra~~nl~EI~~aa~~Rv~gLn~ 451 (731)
T 1p7t_A 372 LYDLKVQKNSRTGSVYIVKPKMHGPQEVAFANKLFTRIETMLGMAPNTLKMGIMDEERRTSLNLRSCIAQARNRVAFINT 451 (731)
T ss_dssp HHHHHHCSSCSSSCEEEEECSCCSHHHHHHHHHHHHHHHHHTTCCTTCEEEEEEECSHHHHTTHHHHHHTTTTTEEEEEE
T ss_pred HhhHHHHhhCCCCCcEEEeCCCCCHHHHHHHHHHHHHHHHhhCCCCCceEEEEEECCHHHHHhHHHHHHhhccceEEEEc
Confidence 355554443 358999999999999999888776422 2 358899999999999999999753 679999
Q ss_pred cCCcccccC-CCC---------------C-HHHHHHHHHH---HHHhcCCcEEEEeccccccccCCCcChHH--HhHHHH
Q 010211 337 ARGDLGAEL-PIE---------------D-VPLLQEDIIR---RCRSMQKPVIVATNMLESMIDHPTPTRAE--VSDIAI 394 (515)
Q Consensus 337 grgDLg~el-g~e---------------~-v~~aqk~Ii~---~c~~aGKPvivATqmLeSMi~~~~PtrAE--v~Dvan 394 (515)
|+.|+..++ +.. . +....+..+. +|+++|++.|-- .|- ..|..-+ ..+-..
T Consensus 452 G~~Dyt~d~I~t~~~~~~~vR~~~t~~~~~~~AY~r~~V~~gLAcraaG~~aIgk-----Gm~--a~p~dmeg~~~dk~~ 524 (731)
T 1p7t_A 452 GFLDRTGDEMHSVMEAGPMLRKNQMKSTPWIKAYERNNVLSGLFCGLRGKAQIGK-----GMW--AMPDLMADMYSQKGD 524 (731)
T ss_dssp CHHHHHHHHHHHTGGGSCBCCGGGSTTCHHHHHHHHHHHHHHHHTTCTTTSEEEE-----CCC--CCTTCHHHHHHHTHH
T ss_pred CHHHHhhhhhcccccCCcccccccccchHHHHHHHHHhhhhHHHHHHcCCCCccc-----ccc--cChhhHHHHHHHHHH
Confidence 999998885 320 1 2233455565 899999987641 122 2344434 556677
Q ss_pred HHHhCCcEEeec
Q 010211 395 AVREGADAVMLS 406 (515)
Q Consensus 395 aV~~G~D~vmLs 406 (515)
....|+|+-++-
T Consensus 525 ~~~~GfdGkwVi 536 (731)
T 1p7t_A 525 QLRAGANTAWVP 536 (731)
T ss_dssp HHHTTCSEEEES
T ss_pred HHhCCCCCcccC
Confidence 789999999985
No 32
>2x0s_A Pyruvate phosphate dikinase; transferase, tropical parasite; 3.00A {Trypanosoma brucei}
Probab=96.53 E-value=0.0085 Score=69.06 Aligned_cols=113 Identities=16% Similarity=0.112 Sum_probs=84.6
Q ss_pred EEEecccCCHHHHHHHHHHHH--------hcCC--CceEEEEecChhhhhcHHHHHhhcCeeEEcCCccccc-CCC----
Q 010211 283 FYAVSFVKDAKVVHELKDYLK--------SCNA--DIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAE-LPI---- 347 (515)
Q Consensus 283 ~ValSfVrsa~dv~~vr~~l~--------~~~~--~i~IIaKIEt~~aveNldeIl~~sDgImIgrgDLg~e-lg~---- 347 (515)
.|.+|||++.+++..+++.+. +.+. +..|-.+||+|.++-.+|+|++.+|++=||-+||..= +|+
T Consensus 727 ~IMiPmV~~~~E~~~~~~~v~~~~~~~~~~~g~~~~~~vG~MiEvPsaal~ad~~a~~~DFfSiGTNDLTQ~tlg~DRd~ 806 (913)
T 2x0s_A 727 EIMVPLVGKKEELSLIREEVVKTAEAVITKSGKRVHYTVGTMIEVPRAAVTADSIAQKADFFSFGTNDLTQMGCGFSRDD 806 (913)
T ss_dssp EEEETTCCSHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECSHHHHHTHHHHGGGCSEEEECTTHHHHHHHTCCGGG
T ss_pred EEEeeecCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeHHHHHHHHHHHHHHCCEEEECHhHHHHHHHHHhcCC
Confidence 489999999999988776542 2233 5788999999999999999999999999999998642 122
Q ss_pred ------------------------CCHHHHHHHHHHHHHhcC--CcEEEEeccccccccCCCcChHHHhHHHHHHHhCCc
Q 010211 348 ------------------------EDVPLLQEDIIRRCRSMQ--KPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGAD 401 (515)
Q Consensus 348 ------------------------e~v~~aqk~Ii~~c~~aG--KPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D 401 (515)
+-|..+.+..++++++++ +||+++.|| .++|.-++ -.+..|.|
T Consensus 807 ~~~~~~~y~~~~~~~~dp~~~~~~~~v~~li~~a~~~gr~~~~~i~vgICGE~------~gdP~~~~-----~L~~~Gid 875 (913)
T 2x0s_A 807 AGPFLRHYGNLGIYAQDPFQSIDQEGIGELVRIAVTKGRRVKPMLKMGICGEH------GGDPATIG-----FCHKVGLD 875 (913)
T ss_dssp CHHHHHHHHHHTSSSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEECSGG------GGCHHHHH-----HHHHHTCS
T ss_pred chhhhhhhhhccccccCCCchhHHHHHHHHHHHHHHHhhhcCCCCeEEEeCCc------ccCHHHHH-----HHHHcCCC
Confidence 134555566666666555 589998873 34565544 67889999
Q ss_pred EEeec
Q 010211 402 AVMLS 406 (515)
Q Consensus 402 ~vmLs 406 (515)
.+=+|
T Consensus 876 ~~S~s 880 (913)
T 2x0s_A 876 YVSCS 880 (913)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 98887
No 33
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=96.00 E-value=0.11 Score=56.50 Aligned_cols=125 Identities=18% Similarity=0.221 Sum_probs=87.6
Q ss_pred CHhhHHHhhcchhcCCcEEEec--ccCCHHHHHHHHHHHHhcCCCceEEE-EecChhhhhcHHHHHhhcCeeEEcCCccc
Q 010211 266 TDKDWEDIKFGVDNQVDFYAVS--FVKDAKVVHELKDYLKSCNADIHVIV-KIESADSIPNLHSIISASDGAMVARGDLG 342 (515)
Q Consensus 266 tekD~~dI~~al~~gvD~ValS--fVrsa~dv~~vr~~l~~~~~~i~IIa-KIEt~~aveNldeIl~~sDgImIgrgDLg 342 (515)
++.+.+.+..-++.|+|+|.+- ...+ +.+.+..+++++...++.||+ -|-|.++.++|-+ +=+|+|-||-|-=+
T Consensus 279 ~~d~~eR~~aLv~AGvD~iviD~ahGhs-~~v~~~i~~ik~~~p~~~viaGNVaT~e~a~~Li~--aGAD~vkVGiGpGS 355 (556)
T 4af0_A 279 RPGDKDRLKLLAEAGLDVVVLDSSQGNS-VYQIEFIKWIKQTYPKIDVIAGNVVTREQAAQLIA--AGADGLRIGMGSGS 355 (556)
T ss_dssp SHHHHHHHHHHHHTTCCEEEECCSCCCS-HHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHH--HTCSEEEECSSCST
T ss_pred CccHHHHHHHHHhcCCcEEEEecccccc-HHHHHHHHHHHhhCCcceEEeccccCHHHHHHHHH--cCCCEEeecCCCCc
Confidence 4566777777788999998762 2222 344455566666667788887 9999999876533 33999998866422
Q ss_pred c-------cCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeec
Q 010211 343 A-------ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (515)
Q Consensus 343 ~-------elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs 406 (515)
+ -+|.+.+ .+..++.+.|++.|+|+|- ..+.-+ .-|++.|+..|+|+|||-
T Consensus 356 iCtTr~v~GvG~PQ~-tAi~~~a~~a~~~~vpvIA---------DGGI~~---sGDi~KAlaaGAd~VMlG 413 (556)
T 4af0_A 356 ICITQEVMAVGRPQG-TAVYAVAEFASRFGIPCIA---------DGGIGN---IGHIAKALALGASAVMMG 413 (556)
T ss_dssp TBCCTTTCCSCCCHH-HHHHHHHHHHGGGTCCEEE---------ESCCCS---HHHHHHHHHTTCSEEEES
T ss_pred ccccccccCCCCcHH-HHHHHHHHHHHHcCCCEEe---------cCCcCc---chHHHHHhhcCCCEEEEc
Confidence 2 2344444 3566777889999999886 334433 568999999999999984
No 34
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=94.70 E-value=0.32 Score=45.24 Aligned_cols=137 Identities=16% Similarity=0.122 Sum_probs=84.3
Q ss_pred hhcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecCh-hhhhcHHHHHhh-cCeeEEcCCcccccCCCCCH
Q 010211 273 IKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESA-DSIPNLHSIISA-SDGAMVARGDLGAELPIEDV 350 (515)
Q Consensus 273 I~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~-~aveNldeIl~~-sDgImIgrgDLg~elg~e~v 350 (515)
++.+.+.|+|+|.++.....+++.++.+++++.|.+ +++-+-++ +-.+.+..+.+. +|.|.+.+|-=+...+...
T Consensus 70 ~~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~g~~--~~v~~~~~~t~~~~~~~~~~~g~d~i~v~~g~~g~~~~~~~- 146 (211)
T 3f4w_A 70 SQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAGKQ--VVVDMICVDDLPARVRLLEEAGADMLAVHTGTDQQAAGRKP- 146 (211)
T ss_dssp HHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCE--EEEECTTCSSHHHHHHHHHHHTCCEEEEECCHHHHHTTCCS-
T ss_pred HHHHHhcCCCEEEEeCCCChhHHHHHHHHHHHcCCe--EEEEecCCCCHHHHHHHHHHcCCCEEEEcCCCcccccCCCC-
Confidence 666778999999987554446677777777776643 33322122 224556777777 8999887663233333222
Q ss_pred HHHHHHHHHHHHhc-CCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecccccCCCCHHHHHHHHHHHHHH
Q 010211 351 PLLQEDIIRRCRSM-QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALR 428 (515)
Q Consensus 351 ~~aqk~Ii~~c~~a-GKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~ 428 (515)
....+++ .... +.|+++.. .-.|. ++..++..|+|++...+---.+..|.++++.+.+..++
T Consensus 147 ~~~i~~l---~~~~~~~~i~~~g--------GI~~~-----~~~~~~~~Gad~vvvGsai~~~~d~~~~~~~l~~~~~~ 209 (211)
T 3f4w_A 147 IDDLITM---LKVRRKARIAVAG--------GISSQ-----TVKDYALLGPDVVIVGSAITHAADPAGEARKISQVLLQ 209 (211)
T ss_dssp HHHHHHH---HHHCSSCEEEEES--------SCCTT-----THHHHHTTCCSEEEECHHHHTCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHH---HHHcCCCcEEEEC--------CCCHH-----HHHHHHHcCCCEEEECHHHcCCCCHHHHHHHHHHHHhh
Confidence 2222333 2222 57776632 22232 45577888999999875555677899999888876553
No 35
>3odm_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta-barrel, lyase; 2.95A {Clostridium perfringens}
Probab=94.45 E-value=0.057 Score=58.60 Aligned_cols=92 Identities=15% Similarity=0.250 Sum_probs=77.2
Q ss_pred cCCcEEEecccCCHHHHHHHHHHHHh--------cC-----CCceEEEEecChhhhhcHHHHHhh--c-----------C
Q 010211 279 NQVDFYAVSFVKDAKVVHELKDYLKS--------CN-----ADIHVIVKIESADSIPNLHSIISA--S-----------D 332 (515)
Q Consensus 279 ~gvD~ValSfVrsa~dv~~vr~~l~~--------~~-----~~i~IIaKIEt~~aveNldeIl~~--s-----------D 332 (515)
..+..+.+||.++++|+.++..++++ .+ ..+.||.-+||.+.+.|.++|+.. . -
T Consensus 138 ~aI~~yIISMT~sasDlL~V~~L~k~~aGL~~~e~g~~~~~~~i~VVPLFETieDL~~a~~Il~~ll~~~r~l~~~~~~Q 217 (560)
T 3odm_A 138 PAISEVVVPMIETGKEISEFQDRVNSVVDMGNKNYKTKLDLNSVRIIPLVEDVPALANIDRILDEHYEIEKSKGHILKDL 217 (560)
T ss_dssp CSCCEEEESSCCSHHHHHHHHHHHHHHHHHHHHHCSSCCCTTSSEEEEEECCHHHHHTTHHHHHHHHHHHHHTTCCCSEE
T ss_pred cccCeEEecCCCCHHHHHHHHHHHHHHhcccccccCCCCCCCCCCeECCcCCHHHHHhhHHHHHHHHHHHHHhcccCCeE
Confidence 45677899999999999998766632 12 257899999999999999999986 2 3
Q ss_pred eeEEcCCcccccCCC----CCHHHHHHHHHHHHHhcCCcEEE
Q 010211 333 GAMVARGDLGAELPI----EDVPLLQEDIIRRCRSMQKPVIV 370 (515)
Q Consensus 333 gImIgrgDLg~elg~----e~v~~aqk~Ii~~c~~aGKPviv 370 (515)
-||+|+.|=+.+-|+ -.+..+|.++.+.|+++|+++-.
T Consensus 218 eVMLGYSDSaKDgG~laS~waly~Aq~~L~~~~~e~gI~l~l 259 (560)
T 3odm_A 218 RIMIARSDTAMSYGLISGVLSVLMAVDGAYKWGEKHGVTISP 259 (560)
T ss_dssp EEEEESHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred EEEEeeccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCcEEE
Confidence 599999998888887 46888999999999999999865
No 36
>1jqo_A Phosphoenolpyruvate carboxylase; beta barrel, carbon dioxide fixation, lyase; 3.00A {Zea mays} SCOP: c.1.12.3
Probab=94.22 E-value=0.095 Score=60.58 Aligned_cols=107 Identities=13% Similarity=0.139 Sum_probs=87.3
Q ss_pred CCcEEEecccCCHHHHHHHHHHHHhcC--CCceEEEEecChhhhhcHHHHHhh---c----------CeeEEcCCccccc
Q 010211 280 QVDFYAVSFVKDAKVVHELKDYLKSCN--ADIHVIVKIESADSIPNLHSIISA---S----------DGAMVARGDLGAE 344 (515)
Q Consensus 280 gvD~ValSfVrsa~dv~~vr~~l~~~~--~~i~IIaKIEt~~aveNldeIl~~---s----------DgImIgrgDLg~e 344 (515)
.+..+.+|+.++++|+.++--+.++.| ..+.|+.-.||.+.++|.++|+.. . --||+|..|=+-+
T Consensus 528 a~~~yIISmt~s~sDvL~V~~L~ke~Gl~~~l~VVPLFETi~DL~~a~~im~~ll~~p~yr~~l~~~QeVMLGYSDS~KD 607 (970)
T 1jqo_A 528 SFGPYIISMATAPSDVLAVELLQRECGVRQPLPVVPLFERLADLQSAPASVERLFSVDWYMDRIKGKQQVMVGYSDSGKD 607 (970)
T ss_dssp TEEEEEETTCCSTHHHHHHHHHHHHTCCSSCCCEEEEECSHHHHHTHHHHHHHHHTCHHHHHHHTSEEEEEEESTTHHHH
T ss_pred hhCeEEeCCCCCHHHHHHHHHHHHHcCCCCCCCeeCCCCCHHHHHhHHHHHHHHHhChHHHHhhCCeEEEEEeccccccc
Confidence 355678899999999999988888887 368899999999999999999986 1 2599999999999
Q ss_pred CCC----CCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcCh
Q 010211 345 LPI----EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTR 386 (515)
Q Consensus 345 lg~----e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~Ptr 386 (515)
-|+ -.+..+|.++.+.|+++|+.+...=-.=.|.-..+-|+.
T Consensus 608 ~G~laA~w~ly~Aq~~L~~v~~~~gV~l~lFHGRGGsvgRGGgp~~ 653 (970)
T 1jqo_A 608 AGRLSAAWQLYRAQEEMAQVAKRYGVKLTLFHGRGGTVGRGGGPTH 653 (970)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCSSGGGTCCCHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHcCCcEEEecCCCCCCCCCCCChH
Confidence 887 478899999999999999999775433334444445553
No 37
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=94.18 E-value=0.21 Score=49.03 Aligned_cols=140 Identities=11% Similarity=0.046 Sum_probs=89.8
Q ss_pred HhhcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhhcCeeEEcCCc--ccccCCCCC
Q 010211 272 DIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGD--LGAELPIED 349 (515)
Q Consensus 272 dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDgImIgrgD--Lg~elg~e~ 349 (515)
.++.+.+.|+|+|.+.. +...++.+.-+.+++.|.+..+...-.| -++.+++++...|.|++-.-+ .+..-=++.
T Consensus 101 ~i~~~~~aGAd~itvH~-Ea~~~~~~~i~~ir~~G~k~Gvalnp~T--p~e~l~~~l~~vD~VlvMsV~PGfgGQ~fi~~ 177 (246)
T 3inp_A 101 LIESFAKAGATSIVFHP-EASEHIDRSLQLIKSFGIQAGLALNPAT--GIDCLKYVESNIDRVLIMSVNPGFGGQKFIPA 177 (246)
T ss_dssp HHHHHHHHTCSEEEECG-GGCSCHHHHHHHHHTTTSEEEEEECTTC--CSGGGTTTGGGCSEEEEECSCTTC--CCCCTT
T ss_pred HHHHHHHcCCCEEEEcc-ccchhHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHHhcCCEEEEeeecCCCCCcccchH
Confidence 45556788999998864 4445676777778877777766555455 457788999889998874222 222111255
Q ss_pred HHHHHHHHHHHHHhcC--CcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecccccCCCCHHHHHHHHHHHHH
Q 010211 350 VPLLQEDIIRRCRSMQ--KPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVAL 427 (515)
Q Consensus 350 v~~aqk~Ii~~c~~aG--KPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~ 427 (515)
...-.+++-+.+.+.| .++-+. -.-.|..+ ..++..|+|.+..-+---..+-|.++++.|++.+.
T Consensus 178 ~l~KI~~lr~~~~~~~~~~~I~VD--------GGI~~~ti-----~~~~~aGAD~~V~GSaIf~a~dp~~~i~~l~~~i~ 244 (246)
T 3inp_A 178 MLDKAKEISKWISSTDRDILLEID--------GGVNPYNI-----AEIAVCGVNAFVAGSAIFNSDSYKQTIDKMRDELN 244 (246)
T ss_dssp HHHHHHHHHHHHHHHTSCCEEEEE--------SSCCTTTH-----HHHHTTTCCEEEESHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCeeEEEE--------CCcCHHHH-----HHHHHcCCCEEEEehHHhCCCCHHHHHHHHHHHHh
Confidence 5555666666666656 444332 33344443 47788999999876433345679999998887653
No 38
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=93.99 E-value=0.43 Score=46.05 Aligned_cols=138 Identities=12% Similarity=0.118 Sum_probs=84.7
Q ss_pred hhcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhhcCeeEEcCCcccccCCC---CC
Q 010211 273 IKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPI---ED 349 (515)
Q Consensus 273 I~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDgImIgrgDLg~elg~---e~ 349 (515)
++.+.+.|+|+|.+.. +...++.+.-+.+++.|.+..+...-.| .++.+++++...|.|++- +++-|+ .-
T Consensus 80 i~~~~~aGad~itvH~-Ea~~~~~~~i~~i~~~G~k~gval~p~t--~~e~l~~~l~~~D~Vl~m----sv~pGf~Gq~f 152 (228)
T 3ovp_A 80 VKPMAVAGANQYTFHL-EATENPGALIKDIRENGMKVGLAIKPGT--SVEYLAPWANQIDMALVM----TVEPGFGGQKF 152 (228)
T ss_dssp HHHHHHHTCSEEEEEG-GGCSCHHHHHHHHHHTTCEEEEEECTTS--CGGGTGGGGGGCSEEEEE----SSCTTTCSCCC
T ss_pred HHHHHHcCCCEEEEcc-CCchhHHHHHHHHHHcCCCEEEEEcCCC--CHHHHHHHhccCCeEEEe----eecCCCCCccc
Confidence 4555678999998864 4445566666777777776666544455 467888999889998873 223232 11
Q ss_pred HHHHHHHHHHHHHhc-CCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecccccCCCCHHHHHHHHHHHHHH
Q 010211 350 VPLLQEDIIRRCRSM-QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALR 428 (515)
Q Consensus 350 v~~aqk~Ii~~c~~a-GKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~ 428 (515)
.+...++|-+..+.. +.++.+. ..-.|..+ ..++..|+|.+..-+---..+-|.++++.|.+.+.+
T Consensus 153 ~~~~l~ki~~lr~~~~~~~I~Vd--------GGI~~~t~-----~~~~~aGAd~~VvGsaIf~a~dp~~~~~~l~~~~~~ 219 (228)
T 3ovp_A 153 MEDMMPKVHWLRTQFPSLDIEVD--------GGVGPDTV-----HKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCSE 219 (228)
T ss_dssp CGGGHHHHHHHHHHCTTCEEEEE--------SSCSTTTH-----HHHHHHTCCEEEESHHHHTCSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCCEEEe--------CCcCHHHH-----HHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHHHHHH
Confidence 222222222222222 3455443 33345433 477889999998864433456799999999887665
Q ss_pred Hh
Q 010211 429 TE 430 (515)
Q Consensus 429 aE 430 (515)
+-
T Consensus 220 ~~ 221 (228)
T 3ovp_A 220 AA 221 (228)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 39
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=93.51 E-value=0.59 Score=49.02 Aligned_cols=119 Identities=24% Similarity=0.324 Sum_probs=72.3
Q ss_pred HHHhhcchhcCCcEEEe--cccCCHHHHHHHHHHHHhcCCCceEEE-EecChhhhhcHHHHHhh-cCeeEEcC--Ccccc
Q 010211 270 WEDIKFGVDNQVDFYAV--SFVKDAKVVHELKDYLKSCNADIHVIV-KIESADSIPNLHSIISA-SDGAMVAR--GDLGA 343 (515)
Q Consensus 270 ~~dI~~al~~gvD~Val--SfVrsa~dv~~vr~~l~~~~~~i~IIa-KIEt~~aveNldeIl~~-sDgImIgr--gDLg~ 343 (515)
.+.++..++.|+|+|.+ ++..+......++. +.+.- .+.|++ .+-|.+.. ..+.+. +|+|.+|. |....
T Consensus 146 ~e~~~~lveaGvdvIvldta~G~~~~~~e~I~~-ik~~~-~i~Vi~g~V~t~e~A---~~a~~aGAD~I~vG~g~Gs~~~ 220 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKE-IKSKM-NIDVIVGNVVTEEAT---KELIENGADGIKVGIGPGSICT 220 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHH-HHTTC-CCEEEEEEECSHHHH---HHHHHTTCSEEEECC-------
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCcccHHHHHHH-HHhcC-CCeEEEeecCCHHHH---HHHHHcCCCEEEEeCCCCcCcc
Confidence 45667778899999986 55444322333333 33322 577776 56665544 444445 89999963 32211
Q ss_pred -----cCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeec
Q 010211 344 -----ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (515)
Q Consensus 344 -----elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs 406 (515)
..|.+ -..+..++.+.+++.++|||-+. +.-+ ..|++.++..|+|++|+-
T Consensus 221 tr~~~g~g~p-~~~al~~v~~~~~~~~IPVIA~G---------GI~~---~~di~kalalGAd~V~vG 275 (400)
T 3ffs_A 221 TRIVAGVGVP-QITAIEKCSSVASKFGIPIIADG---------GIRY---SGDIGKALAVGASSVMIG 275 (400)
T ss_dssp --CCSCBCCC-HHHHHHHHHHHHTTTTCCEEEES---------CCCS---HHHHHHHHTTTCSEEEEC
T ss_pred cccccccchh-HHHHHHHHHHHHHhcCCCEEecC---------CCCC---HHHHHHHHHcCCCEEEEC
Confidence 11222 23556777777777899998743 3433 347889999999999963
No 40
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=93.13 E-value=0.95 Score=48.68 Aligned_cols=123 Identities=19% Similarity=0.208 Sum_probs=76.5
Q ss_pred hhHHHhhcchhcCCcEEEecccC-CHHHHHHHHHHHHhcCCCceEEE-EecChhhhhcHHHHHhh-cCeeEEcCCcccc-
Q 010211 268 KDWEDIKFGVDNQVDFYAVSFVK-DAKVVHELKDYLKSCNADIHVIV-KIESADSIPNLHSIISA-SDGAMVARGDLGA- 343 (515)
Q Consensus 268 kD~~dI~~al~~gvD~ValSfVr-sa~dv~~vr~~l~~~~~~i~IIa-KIEt~~aveNldeIl~~-sDgImIgrgDLg~- 343 (515)
.+.+.++..++.|+|.|.+.... ..+.+.++-+.+.+.-.++.+++ .|-|.+... ...+. +|+|.+|-|-=+.
T Consensus 256 d~~era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi~g~v~t~e~a~---~~~~aGad~i~vg~g~gsi~ 332 (511)
T 3usb_A 256 DAMTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGNVATAEATK---ALIEAGANVVKVGIGPGSIC 332 (511)
T ss_dssp THHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHH---HHHHHTCSEEEECSSCSTTC
T ss_pred chHHHHHHHHhhccceEEecccccchhhhhhHHHHHHHhCCCceEEeeeeccHHHHH---HHHHhCCCEEEECCCCcccc
Confidence 44667777788999999875332 22333333333433334456665 666665543 33344 8999986443111
Q ss_pred ------cCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeec
Q 010211 344 ------ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (515)
Q Consensus 344 ------elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs 406 (515)
..|.+. ..+..++.+.|++.++|+|.+. +.-+ ..|++.++..|+|++|+-
T Consensus 333 ~~~~~~g~g~p~-~~~l~~v~~~~~~~~iPVIa~G---------GI~~---~~di~kala~GA~~V~vG 388 (511)
T 3usb_A 333 TTRVVAGVGVPQ-LTAVYDCATEARKHGIPVIADG---------GIKY---SGDMVKALAAGAHVVMLG 388 (511)
T ss_dssp CHHHHHCCCCCH-HHHHHHHHHHHHTTTCCEEEES---------CCCS---HHHHHHHHHTTCSEEEES
T ss_pred ccccccCCCCCc-HHHHHHHHHHHHhCCCcEEEeC---------CCCC---HHHHHHHHHhCchhheec
Confidence 122233 3566778888999999999843 3333 357889999999999984
No 41
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=93.12 E-value=1.7 Score=44.91 Aligned_cols=122 Identities=20% Similarity=0.279 Sum_probs=75.8
Q ss_pred hhHHHhhcchhcCCcEEEe--cccCCHHHHHHHHHHHHhcCCCceEEE-EecChhhhhcHHHHHhh-cCeeEEc--CCcc
Q 010211 268 KDWEDIKFGVDNQVDFYAV--SFVKDAKVVHELKDYLKSCNADIHVIV-KIESADSIPNLHSIISA-SDGAMVA--RGDL 341 (515)
Q Consensus 268 kD~~dI~~al~~gvD~Val--SfVrsa~dv~~vr~~l~~~~~~i~IIa-KIEt~~aveNldeIl~~-sDgImIg--rgDL 341 (515)
.+.+.++.+++.|+|+|.+ ++..+...+..++. +++...++.+++ .+-|.+....+ .+. +|+|.+| +|--
T Consensus 108 ~~~~~~~~lieaGvd~I~idta~G~~~~~~~~I~~-ik~~~p~v~Vi~G~v~t~e~A~~a---~~aGAD~I~vG~gpGs~ 183 (366)
T 4fo4_A 108 GNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRE-TRAAYPHLEIIGGNVATAEGARAL---IEAGVSAVKVGIGPGSI 183 (366)
T ss_dssp TCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHH-HHHHCTTCEEEEEEECSHHHHHHH---HHHTCSEEEECSSCSTT
T ss_pred hHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHH-HHHhcCCCceEeeeeCCHHHHHHH---HHcCCCEEEEecCCCCC
Confidence 3456677788899999876 44444433333433 333334567766 57777665443 344 9999996 3321
Q ss_pred cc-----cCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeec
Q 010211 342 GA-----ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (515)
Q Consensus 342 g~-----elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs 406 (515)
.. ..|.+. ..+..++.+.|+..++|+|.+. +.-+ -.|++.++..|+|++|+.
T Consensus 184 ~~tr~~~g~g~p~-~~~l~~v~~~~~~~~iPVIA~G---------GI~~---~~di~kala~GAd~V~vG 240 (366)
T 4fo4_A 184 CTTRIVTGVGVPQ-ITAIADAAGVANEYGIPVIADG---------GIRF---SGDISKAIAAGASCVMVG 240 (366)
T ss_dssp BCHHHHHCCCCCH-HHHHHHHHHHHGGGTCCEEEES---------CCCS---HHHHHHHHHTTCSEEEES
T ss_pred CCcccccCcccch-HHHHHHHHHHHhhcCCeEEEeC---------CCCC---HHHHHHHHHcCCCEEEEC
Confidence 11 123333 3445667777788899998743 3333 246788999999999974
No 42
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=93.10 E-value=1 Score=42.84 Aligned_cols=138 Identities=9% Similarity=0.106 Sum_probs=80.1
Q ss_pred HhhcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHh---hcCeeEEcCCccc---ccC
Q 010211 272 DIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIIS---ASDGAMVARGDLG---AEL 345 (515)
Q Consensus 272 dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~---~sDgImIgrgDLg---~el 345 (515)
.++.+.+.|+|+|.+..-.+.+.+....+.+.+.| ..++.-+....-++.+++++. .+|.+.++.-.-| ...
T Consensus 79 ~i~~~~~agad~v~vH~~~~~~~~~~~~~~i~~~g--~~igv~~~p~t~~e~~~~~~~~~~~~d~vl~~sv~pg~~g~~~ 156 (228)
T 1h1y_A 79 YVEPLAKAGASGFTFHIEVSRDNWQELIQSIKAKG--MRPGVSLRPGTPVEEVFPLVEAENPVELVLVMTVEPGFGGQKF 156 (228)
T ss_dssp GHHHHHHHTCSEEEEEGGGCTTTHHHHHHHHHHTT--CEEEEEECTTSCGGGGHHHHHSSSCCSEEEEESSCTTCSSCCC
T ss_pred HHHHHHHcCCCEEEECCCCcccHHHHHHHHHHHcC--CCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEeecCCCCcccC
Confidence 35556678999998876554443133334444444 444555533334567888888 7999988543322 222
Q ss_pred CCCCHHHHHHHHHHHHHhc-CCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecccccCCCCHHHHHHHHHH
Q 010211 346 PIEDVPLLQEDIIRRCRSM-QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHT 424 (515)
Q Consensus 346 g~e~v~~aqk~Ii~~c~~a-GKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ETa~G~yPveaV~~m~~ 424 (515)
+ +......++ ..+.. +.|+.++ ..-.|.. +..++..|+|++..-+---..+-|.++++.|.+
T Consensus 157 ~-~~~l~~i~~---~~~~~~~~pi~v~--------GGI~~~n-----i~~~~~aGaD~vvvGsai~~~~d~~~~~~~l~~ 219 (228)
T 1h1y_A 157 M-PEMMEKVRA---LRKKYPSLDIEVD--------GGLGPST-----IDVAASAGANCIVAGSSIFGAAEPGEVISALRK 219 (228)
T ss_dssp C-GGGHHHHHH---HHHHCTTSEEEEE--------SSCSTTT-----HHHHHHHTCCEEEESHHHHTSSCHHHHHHHHHH
T ss_pred C-HHHHHHHHH---HHHhcCCCCEEEE--------CCcCHHH-----HHHHHHcCCCEEEECHHHHCCCCHHHHHHHHHH
Confidence 2 222222222 22333 7888775 3334432 234455699999986544445579999999987
Q ss_pred HHHH
Q 010211 425 VALR 428 (515)
Q Consensus 425 I~~~ 428 (515)
.+.+
T Consensus 220 ~~~~ 223 (228)
T 1h1y_A 220 SVEG 223 (228)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6653
No 43
>1jqn_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta barrel, Mn2+ and DCDP complex, lyase; HET: DCO; 2.35A {Escherichia coli} SCOP: c.1.12.3 PDB: 1fiy_A* 1qb4_A
Probab=92.56 E-value=0.17 Score=58.12 Aligned_cols=153 Identities=16% Similarity=0.153 Sum_probs=103.2
Q ss_pred hcCCcEEEecccCCHHHHHHHHHHHHhcCC--CceEEEEecChhhhhcHHHHHhh---c----------CeeEEcCCccc
Q 010211 278 DNQVDFYAVSFVKDAKVVHELKDYLKSCNA--DIHVIVKIESADSIPNLHSIISA---S----------DGAMVARGDLG 342 (515)
Q Consensus 278 ~~gvD~ValSfVrsa~dv~~vr~~l~~~~~--~i~IIaKIEt~~aveNldeIl~~---s----------DgImIgrgDLg 342 (515)
+..+..+.+|+.++++|+.++--+.++.|- .+.|+.-.||.+.++|.++|++. . --||+|..|=+
T Consensus 466 ~~a~~~yIISmt~s~sDvL~V~~L~ke~Gl~~~l~VvPLFETi~DL~~a~~im~~ll~~p~yr~~l~~~qeVMlGYSDS~ 545 (883)
T 1jqn_A 466 QGSIAAYVISMAKTPSDVLAVHLLLKEAGIGFAMPVAPLFETLDDLNNANDVMTQLLNIDWYRGLIQGKQMVMIGYSDSA 545 (883)
T ss_dssp TTSEEEEEEETCCSHHHHHHHHHHHHTTTCCSCCCEEEEECSHHHHHHHHHHHHHHHHSHHHHHHTTTEEEEEECHHHHH
T ss_pred hhhcCeEEeCCCCCHHHHHHHHHHHHHhCCCCCcCeeCCCCCHHHHHhHHHHHHHHHhChHHHHhhCCeEEEEEeecccc
Confidence 345667889999999999999888888774 58899999999999999999986 1 35999999988
Q ss_pred ccCCC----CCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecccccCC--CCHH
Q 010211 343 AELPI----EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHG--KFPL 416 (515)
Q Consensus 343 ~elg~----e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ETa~G--~yPv 416 (515)
-+-|+ -.+..+|.++.+.|+++|+.+...=-.=.|+-..+-|+...+-.-......|.=-+--.||+-.- .+|.
T Consensus 546 KD~G~laA~w~ly~Aq~~L~~v~~~~gV~l~lFhGRGGsvgRGGgp~~~ailaqp~gsv~g~~r~TeQGEvI~~kY~~p~ 625 (883)
T 1jqn_A 546 KDAGVMAASWAQYQAQDALIKTCEKAGIELTLFHGRGGSIGRGGAPAHAALLSQPPGSLKGGLRVTEQGEMIRFKYGLPE 625 (883)
T ss_dssp HHHCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECSSTGGGSCHHHHHHHHHTSCTTTTTTCEEEEECGGGHHHHHSSHH
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCchHHHHHhCCCCCcCCceEEEecchHHHHhcCChH
Confidence 88887 47889999999999999999977432222222222332211100000011122233344544322 4588
Q ss_pred HHHHHHHHHHHHHh
Q 010211 417 KAVKVMHTVALRTE 430 (515)
Q Consensus 417 eaV~~m~~I~~~aE 430 (515)
.|++.+..++...-
T Consensus 626 ~a~~nLe~~~~A~l 639 (883)
T 1jqn_A 626 ITVSSLSLYTGAIL 639 (883)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 88887666654443
No 44
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=92.33 E-value=0.83 Score=45.24 Aligned_cols=155 Identities=13% Similarity=0.067 Sum_probs=92.4
Q ss_pred CCHhhHHHh-hcchhcCCcEEEecccCCHH------HHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh-cCeeEE
Q 010211 265 ITDKDWEDI-KFGVDNQVDFYAVSFVKDAK------VVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMV 336 (515)
Q Consensus 265 ltekD~~dI-~~al~~gvD~ValSfVrsa~------dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDgImI 336 (515)
++..++..| +...+.|++.|-+.+-.+.+ |..++-+.+.+. .++.+.+.+-+ .+.++..++. .|.|+|
T Consensus 23 ~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~-~~~~v~~l~~n---~~~i~~a~~~G~~~V~i 98 (295)
T 1ydn_A 23 VPTADKIALINRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIRRA-DGVRYSVLVPN---MKGYEAAAAAHADEIAV 98 (295)
T ss_dssp CCHHHHHHHHHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCC-SSSEEEEECSS---HHHHHHHHHTTCSEEEE
T ss_pred cCHHHHHHHHHHHHHcCcCEEEEccCcCccccccccCHHHHHHHHHhC-CCCEEEEEeCC---HHHHHHHHHCCCCEEEE
Confidence 566777555 55567899988875433333 333333334332 45666666633 3444444444 788887
Q ss_pred cCCccccc---------CCCCCHHHHHHHHHHHHHhcCCcEE--EEeccccccccCCCcChHHHhHHHH-HHHhCCcEEe
Q 010211 337 ARGDLGAE---------LPIEDVPLLQEDIIRRCRSMQKPVI--VATNMLESMIDHPTPTRAEVSDIAI-AVREGADAVM 404 (515)
Q Consensus 337 grgDLg~e---------lg~e~v~~aqk~Ii~~c~~aGKPvi--vATqmLeSMi~~~~PtrAEv~Dvan-aV~~G~D~vm 404 (515)
. ++.+ .+.++.....+++++.|+++|+.|- +.+- . +--....-+..++.+++. +...|+|.+.
T Consensus 99 ~---~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~-~-~~e~~~~~~~~~~~~~~~~~~~~G~d~i~ 173 (295)
T 1ydn_A 99 F---ISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCV-V-ECPYDGPVTPQAVASVTEQLFSLGCHEVS 173 (295)
T ss_dssp E---EESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECS-S-EETTTEECCHHHHHHHHHHHHHHTCSEEE
T ss_pred E---EecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEE-e-cCCcCCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 3 3333 4567788888999999999999986 3220 0 000001223334444443 4568999999
Q ss_pred ecccccCCCCHHHHHHHHHHHHHHH
Q 010211 405 LSGETAHGKFPLKAVKVMHTVALRT 429 (515)
Q Consensus 405 Ls~ETa~G~yPveaV~~m~~I~~~a 429 (515)
|. +|.=...|-+.-+.+..|....
T Consensus 174 l~-Dt~G~~~P~~~~~lv~~l~~~~ 197 (295)
T 1ydn_A 174 LG-DTIGRGTPDTVAAMLDAVLAIA 197 (295)
T ss_dssp EE-ETTSCCCHHHHHHHHHHHHTTS
T ss_pred ec-CCCCCcCHHHHHHHHHHHHHhC
Confidence 98 4554467988888888776544
No 45
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=92.30 E-value=2 Score=41.54 Aligned_cols=138 Identities=14% Similarity=0.133 Sum_probs=88.3
Q ss_pred hhcchhcCCcEEEecccCC-HHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhhcCeeEE---cCCcccccCCCC
Q 010211 273 IKFGVDNQVDFYAVSFVKD-AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMV---ARGDLGAELPIE 348 (515)
Q Consensus 273 I~~al~~gvD~ValSfVrs-a~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDgImI---grgDLg~elg~e 348 (515)
++.+.+.|+|+|.+.. +. ..++.++.+.+++.|.+..+...-.|+ ++.+++++..+|.|.+ -||==|... .+
T Consensus 73 i~~~~~aGAd~itvh~-Ea~~~~~~~~i~~i~~~G~k~gv~lnp~tp--~~~~~~~l~~~D~VlvmsV~pGfggQ~f-~~ 148 (231)
T 3ctl_A 73 IAQLARAGADFITLHP-ETINGQAFRLIDEIRRHDMKVGLILNPETP--VEAMKYYIHKADKITVMTVDPGFAGQPF-IP 148 (231)
T ss_dssp HHHHHHHTCSEEEECG-GGCTTTHHHHHHHHHHTTCEEEEEECTTCC--GGGGTTTGGGCSEEEEESSCTTCSSCCC-CT
T ss_pred HHHHHHcCCCEEEECc-ccCCccHHHHHHHHHHcCCeEEEEEECCCc--HHHHHHHHhcCCEEEEeeeccCcCCccc-cH
Confidence 4556688999998764 33 345777778888888777776666665 7778888888998885 333213332 24
Q ss_pred CHHHHHHHHHHHHHhc--CCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeec-ccccCCCC-HHHHHHHHHH
Q 010211 349 DVPLLQEDIIRRCRSM--QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS-GETAHGKF-PLKAVKVMHT 424 (515)
Q Consensus 349 ~v~~aqk~Ii~~c~~a--GKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs-~ETa~G~y-PveaV~~m~~ 424 (515)
....-.+++-+...+. +.++.+. ..-.+..+ ..++..|+|.+..- +---..+- |.++++.|++
T Consensus 149 ~~l~kI~~lr~~~~~~~~~~~I~Vd--------GGI~~~~~-----~~~~~aGAd~~V~G~saif~~~d~~~~~~~~l~~ 215 (231)
T 3ctl_A 149 EMLDKLAELKAWREREGLEYEIEVD--------GSCNQATY-----EKLMAAGADVFIVGTSGLFNHAENIDEAWRIMTA 215 (231)
T ss_dssp THHHHHHHHHHHHHHHTCCCEEEEE--------SCCSTTTH-----HHHHHHTCCEEEECTTTTGGGCSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCceEEEE--------CCcCHHHH-----HHHHHcCCCEEEEccHHHhCCCCcHHHHHHHHHH
Confidence 5555555555555544 4555543 33344433 36677899999875 43333334 8999999987
Q ss_pred HHH
Q 010211 425 VAL 427 (515)
Q Consensus 425 I~~ 427 (515)
...
T Consensus 216 ~~~ 218 (231)
T 3ctl_A 216 QIL 218 (231)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 46
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=91.90 E-value=1.2 Score=43.08 Aligned_cols=42 Identities=7% Similarity=0.158 Sum_probs=34.2
Q ss_pred HHHHHHHHHhCCcEE--EEecCCCChHHHHHHHHHHHHHHhhcC
Q 010211 114 REMIWKLAEEGMNVA--RLNMSHGDHASHQKTIDLVKEYNSQFE 155 (515)
Q Consensus 114 ~e~i~~li~aGm~v~--RiN~SHg~~e~~~~~i~~ir~~~~~~~ 155 (515)
.+.+++.+++|++.. .+|....+.++..+.++.++++.++++
T Consensus 102 ~~~v~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~g 145 (273)
T 2qjg_A 102 VTTVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWG 145 (273)
T ss_dssp CSCHHHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHcC
Confidence 678899999999999 898888877777777777777776666
No 47
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=91.67 E-value=1.3 Score=47.58 Aligned_cols=124 Identities=19% Similarity=0.185 Sum_probs=76.3
Q ss_pred HhhHHHhhcchhcCCcEEEecccCC-HHHHHHHHHHHHhcCCCceEEE-EecChhhhhcHHHHHhh-cCeeEEcCCcccc
Q 010211 267 DKDWEDIKFGVDNQVDFYAVSFVKD-AKVVHELKDYLKSCNADIHVIV-KIESADSIPNLHSIISA-SDGAMVARGDLGA 343 (515)
Q Consensus 267 ekD~~dI~~al~~gvD~ValSfVrs-a~dv~~vr~~l~~~~~~i~IIa-KIEt~~aveNldeIl~~-sDgImIgrgDLg~ 343 (515)
+.+.+.++..++.|+|.|.+....- .+.+.+.-+.+.+.-.++.|++ .+-|.+... +..+. +|+|.++=|.=+.
T Consensus 230 ~d~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~~~p~~~Vi~g~v~t~e~a~---~l~~aGaD~I~Vg~g~Gs~ 306 (496)
T 4fxs_A 230 PGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGNVATAEGAR---ALIEAGVSAVKVGIGPGSI 306 (496)
T ss_dssp SCCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCCEEEEEECSHHHHH---HHHHHTCSEEEECSSCCTT
T ss_pred cchHHHHHHHHhccCceEEeccccccchHHHHHHHHHHHHCCCceEEEcccCcHHHHH---HHHHhCCCEEEECCCCCcC
Confidence 3456677777788999988754321 1222222223333333566666 477776653 33445 8999986332111
Q ss_pred -------cCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeec
Q 010211 344 -------ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (515)
Q Consensus 344 -------elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs 406 (515)
..|.+ -..+..++.+.|++.++|+|.+. +.-+ ..|++.++..|+|++|+.
T Consensus 307 ~~tr~~~g~g~p-~~~~i~~v~~~~~~~~iPVIa~G---------GI~~---~~di~kala~GAd~V~iG 363 (496)
T 4fxs_A 307 CTTRIVTGVGVP-QITAIADAAGVANEYGIPVIADG---------GIRF---SGDISKAIAAGASCVMVG 363 (496)
T ss_dssp BCHHHHHCCCCC-HHHHHHHHHHHHGGGTCCEEEES---------CCCS---HHHHHHHHHTTCSEEEES
T ss_pred cccccccCCCcc-HHHHHHHHHHHhccCCCeEEEeC---------CCCC---HHHHHHHHHcCCCeEEec
Confidence 12222 44566788888888999999843 4433 347788899999999985
No 48
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=91.65 E-value=2.3 Score=45.37 Aligned_cols=123 Identities=21% Similarity=0.195 Sum_probs=76.0
Q ss_pred HhhHHHhhcchhcCCcEEEec--ccCCHHHHHHHHHHHHhcCCCceEEEE-ecChhhhhcHHHHHhh-cCeeEEcCCccc
Q 010211 267 DKDWEDIKFGVDNQVDFYAVS--FVKDAKVVHELKDYLKSCNADIHVIVK-IESADSIPNLHSIISA-SDGAMVARGDLG 342 (515)
Q Consensus 267 ekD~~dI~~al~~gvD~ValS--fVrsa~dv~~vr~~l~~~~~~i~IIaK-IEt~~aveNldeIl~~-sDgImIgrgDLg 342 (515)
+.+.+.++..++.|+|+|.+- .-.+. .+.+.-+.+.+.-.++.|++. +-|.+.. ....+. +|+|.+|-|.=+
T Consensus 228 ~~~~~~a~~l~~aG~d~I~id~a~g~~~-~~~~~v~~i~~~~p~~~Vi~g~v~t~e~a---~~l~~aGaD~I~vg~g~Gs 303 (490)
T 4avf_A 228 ADTGERVAALVAAGVDVVVVDTAHGHSK-GVIERVRWVKQTFPDVQVIGGNIATAEAA---KALAEAGADAVKVGIGPGS 303 (490)
T ss_dssp TTHHHHHHHHHHTTCSEEEEECSCCSBH-HHHHHHHHHHHHCTTSEEEEEEECSHHHH---HHHHHTTCSEEEECSSCST
T ss_pred cchHHHHHHHhhcccceEEecccCCcch-hHHHHHHHHHHHCCCceEEEeeeCcHHHH---HHHHHcCCCEEEECCCCCc
Confidence 345677777788899998763 22222 222222333333335677775 7776654 334444 899999633211
Q ss_pred c-------cCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeec
Q 010211 343 A-------ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (515)
Q Consensus 343 ~-------elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs 406 (515)
. ..|.+ -..+..++.+++++.++|+|.+. +.-+ ..|++.++..|+|++|+-
T Consensus 304 ~~~t~~~~g~g~p-~~~~l~~v~~~~~~~~iPVIa~G---------GI~~---~~di~kal~~GAd~V~vG 361 (490)
T 4avf_A 304 ICTTRIVAGVGVP-QISAIANVAAALEGTGVPLIADG---------GIRF---SGDLAKAMVAGAYCVMMG 361 (490)
T ss_dssp TCHHHHHTCBCCC-HHHHHHHHHHHHTTTTCCEEEES---------CCCS---HHHHHHHHHHTCSEEEEC
T ss_pred CCCccccCCCCcc-HHHHHHHHHHHhccCCCcEEEeC---------CCCC---HHHHHHHHHcCCCeeeec
Confidence 1 12333 33566778888888899999843 4433 347778899999999985
No 49
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=91.05 E-value=3 Score=43.09 Aligned_cols=119 Identities=18% Similarity=0.253 Sum_probs=69.1
Q ss_pred HhhHHHhhcchhcCCcEEEe--cccCCHHHHHHHHHHHHhcCCCceEEEE-ecChhhhhcHHHHHhh-cCeeEEcCCc--
Q 010211 267 DKDWEDIKFGVDNQVDFYAV--SFVKDAKVVHELKDYLKSCNADIHVIVK-IESADSIPNLHSIISA-SDGAMVARGD-- 340 (515)
Q Consensus 267 ekD~~dI~~al~~gvD~Val--SfVrsa~dv~~vr~~l~~~~~~i~IIaK-IEt~~aveNldeIl~~-sDgImIgrgD-- 340 (515)
+.+.+.++.+++.|+|+|.+ +.-. .+.+.+.-+.+++...++.|+++ +-|++... ...+. +|+|.|+-+-
T Consensus 99 ~~~~e~~~~a~~aGvdvI~id~a~G~-~~~~~e~I~~ir~~~~~~~Vi~G~V~T~e~A~---~a~~aGaD~I~Vg~g~G~ 174 (361)
T 3r2g_A 99 ENELQRAEALRDAGADFFCVDVAHAH-AKYVGKTLKSLRQLLGSRCIMAGNVATYAGAD---YLASCGADIIKAGIGGGS 174 (361)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSCCS-SHHHHHHHHHHHHHHTTCEEEEEEECSHHHHH---HHHHTTCSEEEECCSSSS
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCCC-cHhHHHHHHHHHHhcCCCeEEEcCcCCHHHHH---HHHHcCCCEEEEcCCCCc
Confidence 45567788888999999887 2322 22222222333333236889995 87776543 33344 9999995221
Q ss_pred ccc-----cCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeec
Q 010211 341 LGA-----ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (515)
Q Consensus 341 Lg~-----elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs 406 (515)
-.. ..|.+ |-..+..|.++.+|||.. .+.-+ -.|++.++..|+|+||+-
T Consensus 175 ~~~tr~~~g~g~p-----~l~aI~~~~~~~~PVIAd---------GGI~~---~~di~kALa~GAd~V~iG 228 (361)
T 3r2g_A 175 VCSTRIKTGFGVP-----MLTCIQDCSRADRSIVAD---------GGIKT---SGDIVKALAFGADFVMIG 228 (361)
T ss_dssp CHHHHHHHCCCCC-----HHHHHHHHTTSSSEEEEE---------SCCCS---HHHHHHHHHTTCSEEEES
T ss_pred CccccccCCccHH-----HHHHHHHHHHhCCCEEEE---------CCCCC---HHHHHHHHHcCCCEEEEC
Confidence 100 11222 333444444444588873 23332 347889999999999974
No 50
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=91.00 E-value=0.52 Score=45.26 Aligned_cols=139 Identities=11% Similarity=0.093 Sum_probs=81.6
Q ss_pred HhhcchhcCCcEEEecccC-CHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhhcCeeEEcCCccccc--CCCC
Q 010211 272 DIKFGVDNQVDFYAVSFVK-DAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAE--LPIE 348 (515)
Q Consensus 272 dI~~al~~gvD~ValSfVr-sa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDgImIgrgDLg~e--lg~e 348 (515)
.++.+.+.|+|+|.+..-. ..+...+..+.+.+.|..+.+...-.|+ .+.+++++..+|.|.++.-.-+.. --.+
T Consensus 77 ~i~~~~~aGadgv~vh~e~~~~~~~~~~~~~i~~~g~~~gv~~~p~t~--~e~~~~~~~~~D~v~~msv~pg~ggq~~~~ 154 (230)
T 1tqj_A 77 YVEDFAKAGADIISVHVEHNASPHLHRTLCQIRELGKKAGAVLNPSTP--LDFLEYVLPVCDLILIMSVNPGFGGQSFIP 154 (230)
T ss_dssp THHHHHHHTCSEEEEECSTTTCTTHHHHHHHHHHTTCEEEEEECTTCC--GGGGTTTGGGCSEEEEESSCC----CCCCG
T ss_pred HHHHHHHcCCCEEEECcccccchhHHHHHHHHHHcCCcEEEEEeCCCc--HHHHHHHHhcCCEEEEEEeccccCCccCcH
Confidence 3455667899999887540 2244555555666666655554444565 555778888899887775444322 1113
Q ss_pred CHHHHHHHHHHHHHhc--CCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecccccCCCCHHHHHHHHHHH
Q 010211 349 DVPLLQEDIIRRCRSM--QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTV 425 (515)
Q Consensus 349 ~v~~aqk~Ii~~c~~a--GKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ETa~G~yPveaV~~m~~I 425 (515)
......+++-+.+.+. +.|+.+. ..-.+..+ ......|+|++..-+---..+-|.++++.|.+.
T Consensus 155 ~~~~~i~~lr~~~~~~~~~~~I~v~--------GGI~~~~~-----~~~~~aGad~vvvGSai~~a~d~~~~~~~l~~~ 220 (230)
T 1tqj_A 155 EVLPKIRALRQMCDERGLDPWIEVD--------GGLKPNNT-----WQVLEAGANAIVAGSAVFNAPNYAEAIAGVRNS 220 (230)
T ss_dssp GGHHHHHHHHHHHHHHTCCCEEEEE--------SSCCTTTT-----HHHHHHTCCEEEESHHHHTSSCHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHhcCCCCcEEEE--------CCcCHHHH-----HHHHHcCCCEEEECHHHHCCCCHHHHHHHHHHH
Confidence 4444445555544433 5677663 33334333 245666999999865444455688999888653
No 51
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=90.95 E-value=3.3 Score=42.59 Aligned_cols=119 Identities=24% Similarity=0.328 Sum_probs=71.9
Q ss_pred HHHhhcchhcCCcEEEe--cccCCHHHHHHHHHHHHhcCCCceEEE-EecChhhhhcHHHHHhh-cCeeEEc--CCcccc
Q 010211 270 WEDIKFGVDNQVDFYAV--SFVKDAKVVHELKDYLKSCNADIHVIV-KIESADSIPNLHSIISA-SDGAMVA--RGDLGA 343 (515)
Q Consensus 270 ~~dI~~al~~gvD~Val--SfVrsa~dv~~vr~~l~~~~~~i~IIa-KIEt~~aveNldeIl~~-sDgImIg--rgDLg~ 343 (515)
.+.++.+++.|+|+|.+ ++-.+...+..++.. .+.- ++.+++ .+-|.+.. ....+. +|+|.+| +|....
T Consensus 107 ~e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~i-~~~~-~~~Vivg~v~t~e~A---~~l~~aGaD~I~VG~~~Gs~~~ 181 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEI-KSKM-NIDVIVGNVVTEEAT---KELIENGADGIKVGIGPGSICT 181 (361)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHH-HHHC-CCEEEEEEECSHHHH---HHHHHTTCSEEEECSSCCTTCC
T ss_pred HHHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHHH-HHhc-CCcEEEccCCCHHHH---HHHHHcCcCEEEEecCCCcCCC
Confidence 45566677889999976 332232222333332 2222 567776 77776654 334445 8999996 442211
Q ss_pred -----cCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeec
Q 010211 344 -----ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (515)
Q Consensus 344 -----elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs 406 (515)
..|.+. ..+..++.+.++..+.|+|.+. +.-+. .|++.++..|+|++|+.
T Consensus 182 tr~~~g~g~p~-~~~i~~v~~~~~~~~iPVIA~G---------GI~~~---~di~kala~GAd~V~vG 236 (361)
T 3khj_A 182 TRIVAGVGVPQ-ITAIEKCSSVASKFGIPIIADG---------GIRYS---GDIGKALAVGASSVMIG 236 (361)
T ss_dssp HHHHTCBCCCH-HHHHHHHHHHHHHHTCCEEEES---------CCCSH---HHHHHHHHHTCSEEEES
T ss_pred cccccCCCCCc-HHHHHHHHHHHhhcCCeEEEEC---------CCCCH---HHHHHHHHcCCCEEEEC
Confidence 122333 3455667777777899998743 43332 47788999999999974
No 52
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=90.84 E-value=4.2 Score=39.13 Aligned_cols=135 Identities=16% Similarity=0.055 Sum_probs=78.8
Q ss_pred HHHhhcchhcCCcEEEeccc--CCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh-cCeeEEcCCccccc--
Q 010211 270 WEDIKFGVDNQVDFYAVSFV--KDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAE-- 344 (515)
Q Consensus 270 ~~dI~~al~~gvD~ValSfV--rsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDgImIgrgDLg~e-- 344 (515)
.+++..+.+.|+|+|.+.-. .+++.+.++-+++++. .+.+++.+-|.+- +....+. +|.|.+.-..+...
T Consensus 91 ~~~i~~~~~~Gad~V~l~~~~~~~p~~l~~~i~~~~~~--g~~v~~~v~t~ee---a~~a~~~Gad~Ig~~~~g~t~~~~ 165 (232)
T 3igs_A 91 LDDVDALAQAGAAIIAVDGTARQRPVAVEALLARIHHH--HLLTMADCSSVDD---GLACQRLGADIIGTTMSGYTTPDT 165 (232)
T ss_dssp HHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHT--TCEEEEECCSHHH---HHHHHHTTCSEEECTTTTSSSSSC
T ss_pred HHHHHHHHHcCCCEEEECccccCCHHHHHHHHHHHHHC--CCEEEEeCCCHHH---HHHHHhCCCCEEEEcCccCCCCCC
Confidence 34566667889999876432 3456666666666553 4667776655432 2233333 78886532222111
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecccccCCCCHHHHHHHHHH
Q 010211 345 LPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHT 424 (515)
Q Consensus 345 lg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ETa~G~yPveaV~~m~~ 424 (515)
...+.+ ...+++. +.++|++. ..+.-|.. |+..+...|+|++++- +++.+ |-+..+.+.+
T Consensus 166 ~~~~~~-~~i~~l~----~~~ipvIA---------~GGI~t~~---d~~~~~~~GadgV~VG--sal~~-p~~~~~~~~~ 225 (232)
T 3igs_A 166 PEEPDL-PLVKALH----DAGCRVIA---------EGRYNSPA---LAAEAIRYGAWAVTVG--SAITR-LEHICGWYND 225 (232)
T ss_dssp CSSCCH-HHHHHHH----HTTCCEEE---------ESCCCSHH---HHHHHHHTTCSEEEEC--HHHHC-HHHHHHHHHH
T ss_pred CCCCCH-HHHHHHH----hcCCcEEE---------ECCCCCHH---HHHHHHHcCCCEEEEe--hHhcC-HHHHHHHHHH
Confidence 112333 2233332 23899987 34554543 5667778899999985 56555 8888888877
Q ss_pred HHHHH
Q 010211 425 VALRT 429 (515)
Q Consensus 425 I~~~a 429 (515)
..+++
T Consensus 226 ~i~~~ 230 (232)
T 3igs_A 226 ALKKA 230 (232)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 66543
No 53
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=90.08 E-value=2.5 Score=42.57 Aligned_cols=111 Identities=16% Similarity=0.212 Sum_probs=67.1
Q ss_pred HHhhcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh-cCeeEE-cCCcccccCCCC
Q 010211 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMV-ARGDLGAELPIE 348 (515)
Q Consensus 271 ~dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDgImI-grgDLg~elg~e 348 (515)
+.++.+.+.|+|+|.+++-...+.+..+++ . .+.++.++.+.+-. ..+.+. +|+|.+ |+ +-+...|..
T Consensus 79 ~~~~~a~~~g~d~V~~~~g~p~~~i~~l~~----~--g~~v~~~v~~~~~a---~~~~~~GaD~i~v~g~-~~GG~~g~~ 148 (332)
T 2z6i_A 79 DIVDLVIEEGVKVVTTGAGNPSKYMERFHE----A--GIIVIPVVPSVALA---KRMEKIGADAVIAEGM-EAGGHIGKL 148 (332)
T ss_dssp HHHHHHHHTTCSEEEECSSCGGGTHHHHHH----T--TCEEEEEESSHHHH---HHHHHTTCSCEEEECT-TSSEECCSS
T ss_pred HHHHHHHHCCCCEEEECCCChHHHHHHHHH----c--CCeEEEEeCCHHHH---HHHHHcCCCEEEEECC-CCCCCCCCc
Confidence 456667788999999887544444444443 2 57899999876543 334444 899999 54 222222312
Q ss_pred CHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeec
Q 010211 349 DVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (515)
Q Consensus 349 ~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs 406 (515)
.-....+++. ...++|++.+. +.-+. .++..++..|+|++++.
T Consensus 149 ~~~~ll~~i~---~~~~iPViaaG---------GI~~~---~~~~~al~~GAdgV~vG 191 (332)
T 2z6i_A 149 TTMTLVRQVA---TAISIPVIAAG---------GIADG---EGAAAGFMLGAEAVQVG 191 (332)
T ss_dssp CHHHHHHHHH---HHCSSCEEEES---------SCCSH---HHHHHHHHTTCSEEEEC
T ss_pred cHHHHHHHHH---HhcCCCEEEEC---------CCCCH---HHHHHHHHcCCCEEEec
Confidence 2223333333 34579999864 33222 25667788899999975
No 54
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=89.77 E-value=4.1 Score=39.89 Aligned_cols=87 Identities=10% Similarity=0.095 Sum_probs=55.4
Q ss_pred HhhHHH-hhcchhcCCcEEEecccCCHHHHHHHHHHHHhcCC-CceEEEEec--C-hhhhhcHHHHHhh-cCeeEEcCCc
Q 010211 267 DKDWED-IKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNA-DIHVIVKIE--S-ADSIPNLHSIISA-SDGAMVARGD 340 (515)
Q Consensus 267 ekD~~d-I~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~-~i~IIaKIE--t-~~aveNldeIl~~-sDgImIgrgD 340 (515)
.+.+.. .+.+.+.|+|||..||-.+.++++.+++.. +. .+..+--|- | .++++|+.+.++. +||+-+||.=
T Consensus 158 ~~~i~~a~~~a~~~GAD~vkt~~~~~~e~~~~~~~~~---~~~pV~asGGi~~~~~~~~l~~i~~~~~aGA~GvsvgraI 234 (263)
T 1w8s_A 158 PEIVAYAARIALELGADAMKIKYTGDPKTFSWAVKVA---GKVPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVGRNV 234 (263)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECCSSHHHHHHHHHHT---TTSCEEEECCSCCSSHHHHHHHHHHHHHTTCCEEEESHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHhC---CCCeEEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEehhh
Confidence 344433 356778999999999865777777766544 22 344444442 3 4577788888887 8999999875
Q ss_pred ccccCCCCCHHHHHHHHHHH
Q 010211 341 LGAELPIEDVPLLQEDIIRR 360 (515)
Q Consensus 341 Lg~elg~e~v~~aqk~Ii~~ 360 (515)
+.. ++...+-+.+.+.
T Consensus 235 ~~~----~dp~~~~~~l~~~ 250 (263)
T 1w8s_A 235 WQR----RDALKFARALAEL 250 (263)
T ss_dssp HTS----TTHHHHHHHHHHH
T ss_pred cCC----cCHHHHHHHHHHH
Confidence 543 3444444444433
No 55
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=89.57 E-value=7.9 Score=41.19 Aligned_cols=122 Identities=21% Similarity=0.232 Sum_probs=72.7
Q ss_pred hHHHhhcchhcCCcEEEe--cccCCHHHHHHHHHHHHhcCCCceEEEE-ecChhhhhcHHHHHhh-cCeeEEcC--Cccc
Q 010211 269 DWEDIKFGVDNQVDFYAV--SFVKDAKVVHELKDYLKSCNADIHVIVK-IESADSIPNLHSIISA-SDGAMVAR--GDLG 342 (515)
Q Consensus 269 D~~dI~~al~~gvD~Val--SfVrsa~dv~~vr~~l~~~~~~i~IIaK-IEt~~aveNldeIl~~-sDgImIgr--gDLg 342 (515)
..+.++.+++.|+|+|.+ ++-... ...++-+.+.+.-.++.|+++ +.|.+.... ..+. +|+|.+|- |--.
T Consensus 256 ~~~~a~~~~~aG~d~v~i~~~~G~~~-~~~~~i~~i~~~~~~~pvi~~~v~t~~~a~~---l~~aGad~I~vg~~~G~~~ 331 (514)
T 1jcn_A 256 DKYRLDLLTQAGVDVIVLDSSQGNSV-YQIAMVHYIKQKYPHLQVIGGNVVTAAQAKN---LIDAGVDGLRVGMGCGSIC 331 (514)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCCSH-HHHHHHHHHHHHCTTCEEEEEEECSHHHHHH---HHHHTCSEEEECSSCSCCB
T ss_pred hHHHHHHHHHcCCCEEEeeccCCcch-hHHHHHHHHHHhCCCCceEecccchHHHHHH---HHHcCCCEEEECCCCCccc
Confidence 456677788899999987 332222 222222223222236788875 777665433 3334 89999853 3110
Q ss_pred c-----cCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecc
Q 010211 343 A-----ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 407 (515)
Q Consensus 343 ~-----elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ 407 (515)
. ..|.+ .......+-+.++..+.|+|.+. +.-+ ..|+..++..|+|++++..
T Consensus 332 ~t~~~~~~g~~-~~~~~~~~~~~~~~~~ipVia~G---------GI~~---~~di~kala~GAd~V~iG~ 388 (514)
T 1jcn_A 332 ITQEVMACGRP-QGTAVYKVAEYARRFGVPIIADG---------GIQT---VGHVVKALALGASTVMMGS 388 (514)
T ss_dssp TTBCCCSCCCC-HHHHHHHHHHHHGGGTCCEEEES---------CCCS---HHHHHHHHHTTCSEEEEST
T ss_pred ccccccCCCcc-chhHHHHHHHHHhhCCCCEEEEC---------CCCC---HHHHHHHHHcCCCeeeECH
Confidence 0 02322 34455666666777899998743 3322 3477899999999999864
No 56
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=89.54 E-value=2.7 Score=38.76 Aligned_cols=132 Identities=14% Similarity=0.113 Sum_probs=74.0
Q ss_pred hhcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEe--cChhhhhcHHHHHhh-cCeeEEcCCcccccCCCCC
Q 010211 273 IKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKI--ESADSIPNLHSIISA-SDGAMVARGDLGAELPIED 349 (515)
Q Consensus 273 I~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKI--Et~~aveNldeIl~~-sDgImIgrgDLg~elg~e~ 349 (515)
++.+.+.|+|+|.+......+.+.++++++++.|..+. ++.. .|++. .++++.+. +|.+-+.++-.+...|..-
T Consensus 70 ~~~a~~~Gad~v~vh~~~~~~~~~~~~~~~~~~g~~~g-v~~~s~~~p~~--~~~~~~~~g~d~v~~~~~~~~~~~g~~~ 146 (207)
T 3ajx_A 70 ADIAFKAGADLVTVLGSADDSTIAGAVKAAQAHNKGVV-VDLIGIEDKAT--RAQEVRALGAKFVEMHAGLDEQAKPGFD 146 (207)
T ss_dssp HHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCEEE-EECTTCSSHHH--HHHHHHHTTCSEEEEECCHHHHTSTTCC
T ss_pred HHHHHhCCCCEEEEeccCChHHHHHHHHHHHHcCCceE-EEEecCCChHH--HHHHHHHhCCCEEEEEecccccccCCCc
Confidence 34566789999987655555677778888876655432 2222 12222 12333332 7887344444333333221
Q ss_pred HHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecccccCCCCHHHHHHHHHH
Q 010211 350 VPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHT 424 (515)
Q Consensus 350 v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ETa~G~yPveaV~~m~~ 424 (515)
.. +++-+.+.. ..|+++. -...|. .+..++..|+|++...+--.....|.++++.+.+
T Consensus 147 ~~---~~i~~~~~~-~~pi~v~--------GGI~~~-----~~~~~~~aGad~vvvGsaI~~~~dp~~~~~~~~~ 204 (207)
T 3ajx_A 147 LN---GLLAAGEKA-RVPFSVA--------GGVKVA-----TIPAVQKAGAEVAVAGGAIYGAADPAAAAKELRA 204 (207)
T ss_dssp TH---HHHHHHHHH-TSCEEEE--------SSCCGG-----GHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHH
T ss_pred hH---HHHHHhhCC-CCCEEEE--------CCcCHH-----HHHHHHHcCCCEEEEeeeccCCCCHHHHHHHHHH
Confidence 11 334333333 6787663 233343 3446788999999976554445568888887764
No 57
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=88.98 E-value=4.3 Score=38.15 Aligned_cols=137 Identities=17% Similarity=0.158 Sum_probs=76.0
Q ss_pred HHhhcchhcCCcEEEeccc--CCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhhcCeeE---EcCCcccccC
Q 010211 271 EDIKFGVDNQVDFYAVSFV--KDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAM---VARGDLGAEL 345 (515)
Q Consensus 271 ~dI~~al~~gvD~ValSfV--rsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDgIm---IgrgDLg~el 345 (515)
+.++.+.+.|+|+|.+..- .. ++..++.+.+.+.|. .++.-+-+..-.+.+.++...+|.|+ +.+|--|...
T Consensus 82 ~~v~~~~~~Gad~v~vh~~~~~~-~~~~~~~~~~~~~g~--~ig~~~~p~t~~e~~~~~~~~~d~vl~~~~~pg~~g~~~ 158 (230)
T 1rpx_A 82 QRVPDFIKAGADIVSVHCEQSST-IHLHRTINQIKSLGA--KAGVVLNPGTPLTAIEYVLDAVDLVLIMSVNPGFGGQSF 158 (230)
T ss_dssp HHHHHHHHTTCSEEEEECSTTTC-SCHHHHHHHHHHTTS--EEEEEECTTCCGGGGTTTTTTCSEEEEESSCTTCSSCCC
T ss_pred HHHHHHHHcCCCEEEEEecCccc-hhHHHHHHHHHHcCC--cEEEEeCCCCCHHHHHHHHhhCCEEEEEEEcCCCCCccc
Confidence 3555567789999987654 33 344445555555443 34444422223344555556688773 3344333333
Q ss_pred CCCCHHHHHHHHHHHHHhc--CCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecccccCCCCHHHHHHHHH
Q 010211 346 PIEDVPLLQEDIIRRCRSM--QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMH 423 (515)
Q Consensus 346 g~e~v~~aqk~Ii~~c~~a--GKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ETa~G~yPveaV~~m~ 423 (515)
. +......+++-+.+.+. ..|+++. ..-.|.. +..++..|+|++...+--...+-|.++++.+.
T Consensus 159 ~-~~~~~~i~~l~~~~~~~~~~~pi~v~--------GGI~~~n-----~~~~~~aGad~vvvgSaI~~a~dp~~a~~~l~ 224 (230)
T 1rpx_A 159 I-ESQVKKISDLRKICAERGLNPWIEVD--------GGVGPKN-----AYKVIEAGANALVAGSAVFGAPDYAEAIKGIK 224 (230)
T ss_dssp C-TTHHHHHHHHHHHHHHHTCCCEEEEE--------SSCCTTT-----HHHHHHHTCCEEEESHHHHTSSCHHHHHHHHH
T ss_pred c-HHHHHHHHHHHHHHHhcCCCceEEEE--------CCCCHHH-----HHHHHHcCCCEEEEChhhhCCCCHHHHHHHHH
Confidence 3 23333334444444322 5777664 3344432 33556679999998866555667989888775
Q ss_pred H
Q 010211 424 T 424 (515)
Q Consensus 424 ~ 424 (515)
+
T Consensus 225 ~ 225 (230)
T 1rpx_A 225 T 225 (230)
T ss_dssp T
T ss_pred H
Confidence 4
No 58
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=88.81 E-value=3.3 Score=39.21 Aligned_cols=133 Identities=15% Similarity=0.187 Sum_probs=76.9
Q ss_pred HHhhcchhcCCcEEEec-----ccCC----HHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh-cCeeEEcCCc
Q 010211 271 EDIKFGVDNQVDFYAVS-----FVKD----AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGD 340 (515)
Q Consensus 271 ~dI~~al~~gvD~ValS-----fVrs----a~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDgImIgrgD 340 (515)
++++.+.+.|+|++.+- |+.. .+.++++++.. +....+-.++..++. .++..++. +|++.+--+.
T Consensus 23 ~~i~~~~~~Gad~i~l~i~Dg~fv~~~~~~~~~~~~lr~~~---~~~~~v~lmv~d~~~--~i~~~~~agad~v~vH~~~ 97 (228)
T 1h1y_A 23 AEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHT---KAYLDCHLMVTNPSD--YVEPLAKAGASGFTFHIEV 97 (228)
T ss_dssp HHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHHTTC---CSEEEEEEESSCGGG--GHHHHHHHTCSEEEEEGGG
T ss_pred HHHHHHHHcCCCEEEEEEecCCcCcchhhCHHHHHHHHhhc---CCcEEEEEEecCHHH--HHHHHHHcCCCEEEECCCC
Confidence 56667778899988765 6665 44454454432 223344467777643 47888877 8999774211
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHh---CCcEEeeccc---ccCCCC
Q 010211 341 LGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVRE---GADAVMLSGE---TAHGKF 414 (515)
Q Consensus 341 Lg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~---G~D~vmLs~E---Ta~G~y 414 (515)
.+. ...+.++.+++.|+.++++. ....| .| . ...+.. ++|.+++.+= +.--+|
T Consensus 98 ------~~~---~~~~~~~~i~~~g~~igv~~-------~p~t~--~e--~-~~~~~~~~~~~d~vl~~sv~pg~~g~~~ 156 (228)
T 1h1y_A 98 ------SRD---NWQELIQSIKAKGMRPGVSL-------RPGTP--VE--E-VFPLVEAENPVELVLVMTVEPGFGGQKF 156 (228)
T ss_dssp ------CTT---THHHHHHHHHHTTCEEEEEE-------CTTSC--GG--G-GHHHHHSSSCCSEEEEESSCTTCSSCCC
T ss_pred ------ccc---HHHHHHHHHHHcCCCEEEEE-------eCCCC--HH--H-HHHHHhcCCCCCEEEEEeecCCCCcccC
Confidence 011 11466777888999999864 21222 22 1 134556 8999987321 112346
Q ss_pred HHHHHHHHHHHHHHH
Q 010211 415 PLKAVKVMHTVALRT 429 (515)
Q Consensus 415 PveaV~~m~~I~~~a 429 (515)
+-+..+.++++.+..
T Consensus 157 ~~~~l~~i~~~~~~~ 171 (228)
T 1h1y_A 157 MPEMMEKVRALRKKY 171 (228)
T ss_dssp CGGGHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHhc
Confidence 655566555554444
No 59
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=88.80 E-value=4.7 Score=37.34 Aligned_cols=136 Identities=11% Similarity=0.115 Sum_probs=77.1
Q ss_pred hhcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhhcCeeEE-c--CCcccccCCCCC
Q 010211 273 IKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMV-A--RGDLGAELPIED 349 (515)
Q Consensus 273 I~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDgImI-g--rgDLg~elg~e~ 349 (515)
++.+.+.|+|+|.+.--.. +....+.+.+.+.+ ..++.-+-+....+.+.++...+|.|++ + +|==|...+ +.
T Consensus 77 i~~~~~~gad~v~vh~~~~-~~~~~~~~~~~~~g--~~i~~~~~~~t~~e~~~~~~~~~d~vl~~~~~~g~~g~~~~-~~ 152 (220)
T 2fli_A 77 VEAFAQAGADIMTIHTEST-RHIHGALQKIKAAG--MKAGVVINPGTPATALEPLLDLVDQVLIMTVNPGFGGQAFI-PE 152 (220)
T ss_dssp HHHHHHHTCSEEEEEGGGC-SCHHHHHHHHHHTT--SEEEEEECTTSCGGGGGGGTTTCSEEEEESSCTTCSSCCCC-GG
T ss_pred HHHHHHcCCCEEEEccCcc-ccHHHHHHHHHHcC--CcEEEEEcCCCCHHHHHHHHhhCCEEEEEEECCCCcccccC-HH
Confidence 4556678999998754333 44555556665544 3345545333344455555566887754 2 221122222 22
Q ss_pred HHHHHHHHHHHHHhc--CCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecccccCCCCHHHHHHHHHHH
Q 010211 350 VPLLQEDIIRRCRSM--QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTV 425 (515)
Q Consensus 350 v~~aqk~Ii~~c~~a--GKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ETa~G~yPveaV~~m~~I 425 (515)
...-.+++-+.+... +.|++++ -.-.|. ++..+...|+|++...+---.+.-|.++++.+.+.
T Consensus 153 ~~~~i~~~~~~~~~~~~~~~i~v~--------GGI~~~-----~~~~~~~~Gad~vvvGsai~~~~d~~~a~~~~~~~ 217 (220)
T 2fli_A 153 CLEKVATVAKWRDEKGLSFDIEVD--------GGVDNK-----TIRACYEAGANVFVAGSYLFKASDLVSQVQTLRTA 217 (220)
T ss_dssp GHHHHHHHHHHHHHTTCCCEEEEE--------SSCCTT-----THHHHHHHTCCEEEESHHHHTSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCceEEEE--------CcCCHH-----HHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHHH
Confidence 223334444444433 5676664 333443 33455666999999876655677899999888654
No 60
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=88.69 E-value=1.8 Score=41.77 Aligned_cols=128 Identities=11% Similarity=0.112 Sum_probs=77.3
Q ss_pred CcEEEecccCCHH-HHHHHHH---HHHhcCCCceEEEEecChhhhhcHHHHHh--hcCeeEEcCCccccc---CCCCCHH
Q 010211 281 VDFYAVSFVKDAK-VVHELKD---YLKSCNADIHVIVKIESADSIPNLHSIIS--ASDGAMVARGDLGAE---LPIEDVP 351 (515)
Q Consensus 281 vD~ValSfVrsa~-dv~~vr~---~l~~~~~~i~IIaKIEt~~aveNldeIl~--~sDgImIgrgDLg~e---lg~e~v~ 351 (515)
+|++.+-. +... ++.+.-+ .+++.|.++.+-.+-.|+ ++.+++++. .+|.|++..-+-|.. .+ +...
T Consensus 86 Ad~itvH~-ea~~~~~~~~i~~~~~i~~~G~k~gvalnp~tp--~~~~~~~l~~g~~D~VlvmsV~pGf~gq~f~-~~~l 161 (227)
T 1tqx_A 86 SNQLTFHF-EALNEDTERCIQLAKEIRDNNLWCGISIKPKTD--VQKLVPILDTNLINTVLVMTVEPGFGGQSFM-HDMM 161 (227)
T ss_dssp SSEEEEEG-GGGTTCHHHHHHHHHHHHTTTCEEEEEECTTSC--GGGGHHHHTTTCCSEEEEESSCTTCSSCCCC-GGGH
T ss_pred CCEEEEee-cCCccCHHHHHHHHHHHHHcCCeEEEEeCCCCc--HHHHHHHhhcCCcCEEEEeeeccCCCCcccc-hHHH
Confidence 89887754 3333 5666666 788888777776655665 777899999 799997754333322 21 2222
Q ss_pred HHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecccccCCCCHHHHHHHHHHHHH
Q 010211 352 LLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVAL 427 (515)
Q Consensus 352 ~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~ 427 (515)
.-.+++-+... +.++.+. -.-.+. .+..++..|+|.+..-+---..+-|.++++.+++...
T Consensus 162 ~ki~~lr~~~~--~~~I~Vd--------GGI~~~-----ti~~~~~aGAd~~V~GsaIf~~~d~~~~i~~l~~~~~ 222 (227)
T 1tqx_A 162 GKVSFLRKKYK--NLNIQVD--------GGLNIE-----TTEISASHGANIIVAGTSIFNAEDPKYVIDTMRVSVQ 222 (227)
T ss_dssp HHHHHHHHHCT--TCEEEEE--------SSCCHH-----HHHHHHHHTCCEEEESHHHHTCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcc--CCeEEEE--------CCCCHH-----HHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHHHHH
Confidence 22222222221 5555543 222232 3446677899999976443344469999999987554
No 61
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=88.67 E-value=7.3 Score=36.15 Aligned_cols=136 Identities=11% Similarity=0.083 Sum_probs=72.4
Q ss_pred HHHhhcchhcCCcEEEecccC--CH-HHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh-cCeeEEcCCcccc-c
Q 010211 270 WEDIKFGVDNQVDFYAVSFVK--DA-KVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGA-E 344 (515)
Q Consensus 270 ~~dI~~al~~gvD~ValSfVr--sa-~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDgImIgrgDLg~-e 344 (515)
.+.++.+.+.|+|+|.+.... ++ +.+.++-+.+.+.-.+..++..+-|.+-. ....+. +|.|+++.....- .
T Consensus 78 ~~~i~~~~~~Gad~v~l~~~~~~~p~~~~~~~i~~~~~~~~~~~v~~~~~t~~e~---~~~~~~G~d~i~~~~~g~t~~~ 154 (223)
T 1y0e_A 78 SKEVDELIESQCEVIALDATLQQRPKETLDELVSYIRTHAPNVEIMADIATVEEA---KNAARLGFDYIGTTLHGYTSYT 154 (223)
T ss_dssp HHHHHHHHHHTCSEEEEECSCSCCSSSCHHHHHHHHHHHCTTSEEEEECSSHHHH---HHHHHTTCSEEECTTTTSSTTS
T ss_pred HHHHHHHHhCCCCEEEEeeecccCcccCHHHHHHHHHHhCCCceEEecCCCHHHH---HHHHHcCCCEEEeCCCcCcCCC
Confidence 345666678899998775432 22 23333333343332245666666554322 222233 8999886543221 1
Q ss_pred CCCC-CHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecccccCCCCHHHHHHHHH
Q 010211 345 LPIE-DVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMH 423 (515)
Q Consensus 345 lg~e-~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ETa~G~yPveaV~~m~ 423 (515)
.+.. ..+ -.+.+-+.+...+.|++.. .+.-+.. |+..++..|+|++++. +++-+ |-++.+.+.
T Consensus 155 ~~~~~~~~-~~~~~~~~~~~~~ipvia~---------GGI~~~~---~~~~~~~~Gad~v~vG--~al~~-p~~~~~~~~ 218 (223)
T 1y0e_A 155 QGQLLYQN-DFQFLKDVLQSVDAKVIAE---------GNVITPD---MYKRVMDLGVHCSVVG--GAITR-PKEITKRFV 218 (223)
T ss_dssp TTCCTTHH-HHHHHHHHHHHCCSEEEEE---------SSCCSHH---HHHHHHHTTCSEEEEC--HHHHC-HHHHHHHHH
T ss_pred CCCCCCcc-cHHHHHHHHhhCCCCEEEe---------cCCCCHH---HHHHHHHcCCCEEEEC--hHHcC-cHHHHHHHH
Confidence 1111 122 2223333344568998873 3443433 4556677899999985 34333 777777665
Q ss_pred H
Q 010211 424 T 424 (515)
Q Consensus 424 ~ 424 (515)
+
T Consensus 219 ~ 219 (223)
T 1y0e_A 219 Q 219 (223)
T ss_dssp H
T ss_pred H
Confidence 4
No 62
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=88.64 E-value=4.6 Score=38.75 Aligned_cols=116 Identities=12% Similarity=0.144 Sum_probs=72.5
Q ss_pred HHhhcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh-cCeeEEcCCcccccCCCCC
Q 010211 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIED 349 (515)
Q Consensus 271 ~dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDgImIgrgDLg~elg~e~ 349 (515)
+.++.+++.|++.|-+.+ ++......++..-++. .++.+-+-. .---+..+.-+++ +|++..+-.|
T Consensus 42 ~~~~al~~gGv~~iel~~-k~~~~~~~i~~l~~~~-~~~~igagt--vl~~d~~~~A~~aGAd~v~~p~~d--------- 108 (225)
T 1mxs_A 42 PLADALAAGGIRTLEVTL-RSQHGLKAIQVLREQR-PELCVGAGT--VLDRSMFAAVEAAGAQFVVTPGIT--------- 108 (225)
T ss_dssp HHHHHHHHTTCCEEEEES-SSTHHHHHHHHHHHHC-TTSEEEEEC--CCSHHHHHHHHHHTCSSEECSSCC---------
T ss_pred HHHHHHHHCCCCEEEEec-CCccHHHHHHHHHHhC-cccEEeeCe--EeeHHHHHHHHHCCCCEEEeCCCC---------
Confidence 555777889999999885 5555544444443333 345554442 2222444544445 8999865333
Q ss_pred HHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecccccCCCCHHHHH---HHHHHHH
Q 010211 350 VPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAV---KVMHTVA 426 (515)
Q Consensus 350 v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ETa~G~yPveaV---~~m~~I~ 426 (515)
..+++.|+..|.|.+.-+ ..|+ ++..+...|+|.+.+ ||.+.+ ++++.+.
T Consensus 109 -----~~v~~~~~~~g~~~i~G~---------~t~~-----e~~~A~~~Gad~vk~--------FPa~~~~G~~~lk~i~ 161 (225)
T 1mxs_A 109 -----EDILEAGVDSEIPLLPGI---------STPS-----EIMMGYALGYRRFKL--------FPAEISGGVAAIKAFG 161 (225)
T ss_dssp -----HHHHHHHHHCSSCEECEE---------CSHH-----HHHHHHTTTCCEEEE--------TTHHHHTHHHHHHHHH
T ss_pred -----HHHHHHHHHhCCCEEEee---------CCHH-----HHHHHHHCCCCEEEE--------ccCccccCHHHHHHHH
Confidence 368889999999987532 2233 345788999999988 885543 4555443
No 63
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=88.55 E-value=6.5 Score=40.15 Aligned_cols=122 Identities=16% Similarity=0.183 Sum_probs=69.3
Q ss_pred hHHHhhcchhc--CCcEEEeccc-CCHHHHHHHHHHHHhcCCCceEEEE-ecChhhhhcHHHHHhh-cCeeEEcCCcccc
Q 010211 269 DWEDIKFGVDN--QVDFYAVSFV-KDAKVVHELKDYLKSCNADIHVIVK-IESADSIPNLHSIISA-SDGAMVARGDLGA 343 (515)
Q Consensus 269 D~~dI~~al~~--gvD~ValSfV-rsa~dv~~vr~~l~~~~~~i~IIaK-IEt~~aveNldeIl~~-sDgImIgrgDLg~ 343 (515)
+.+.++..++. |+|.+.+.+. ....++.+.-+.+++...++.|+++ +-|++ ......+. +|+|.++-|-=+.
T Consensus 119 ~~~~~~~l~~~~~g~~~i~i~~~~g~~~~~~~~i~~lr~~~~~~~vi~g~v~t~e---~A~~a~~aGaD~I~v~~g~G~~ 195 (351)
T 2c6q_A 119 DFEQLEQILEAIPQVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIMAGNVVTGE---MVEELILSGADIIKVGIGPGSV 195 (351)
T ss_dssp HHHHHHHHHHHCTTCCEEEEECSCTTBHHHHHHHHHHHHHCTTSEEEEEEECSHH---HHHHHHHTTCSEEEECSSCSTT
T ss_pred HHHHHHHHHhccCCCCEEEEEecCCCcHHHHHHHHHHHHhcCCCeEEEEeCCCHH---HHHHHHHhCCCEEEECCCCCcC
Confidence 34455555555 8998766421 1223332222333333335667664 55543 33333444 8999886321000
Q ss_pred -------cCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeec
Q 010211 344 -------ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (515)
Q Consensus 344 -------elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs 406 (515)
..+.+ -..+..++.+.+...+.|||.+. +.-+ -.|++.++..|+|+|++.
T Consensus 196 ~~~r~~~g~~~p-~~~~l~~v~~~~~~~~ipvIa~G---------GI~~---g~di~kAlalGA~~V~vG 252 (351)
T 2c6q_A 196 CTTRKKTGVGYP-QLSAVMECADAAHGLKGHIISDG---------GCSC---PGDVAKAFGAGADFVMLG 252 (351)
T ss_dssp BCHHHHHCBCCC-HHHHHHHHHHHHHHTTCEEEEES---------CCCS---HHHHHHHHHTTCSEEEES
T ss_pred cCccccCCCCcc-HHHHHHHHHHHHhhcCCcEEEeC---------CCCC---HHHHHHHHHcCCCceecc
Confidence 11222 34455677777888899999853 3333 347889999999999874
No 64
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=88.41 E-value=3.5 Score=39.19 Aligned_cols=103 Identities=15% Similarity=0.145 Sum_probs=66.4
Q ss_pred HHhhcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh-cCeeEEcCCcccccCCCCC
Q 010211 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIED 349 (515)
Q Consensus 271 ~dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDgImIgrgDLg~elg~e~ 349 (515)
+.++.+++.|++.|-+.+ ++......++..-++. .+..+-+-. .---+.++.-++. +|++..+-.|
T Consensus 32 ~~~~al~~gGv~~iel~~-k~~~~~~~i~~l~~~~-~~~~vgagt--vi~~d~~~~A~~aGAd~v~~p~~d--------- 98 (214)
T 1wbh_A 32 PMAKALVAGGVRVLNVTL-RTECAVDAIRAIAKEV-PEAIVGAGT--VLNPQQLAEVTEAGAQFAISPGLT--------- 98 (214)
T ss_dssp HHHHHHHHTTCCEEEEES-CSTTHHHHHHHHHHHC-TTSEEEEES--CCSHHHHHHHHHHTCSCEEESSCC---------
T ss_pred HHHHHHHHcCCCEEEEeC-CChhHHHHHHHHHHHC-cCCEEeeCE--EEEHHHHHHHHHcCCCEEEcCCCC---------
Confidence 555777889999999985 5555544454444333 344544432 2222555555555 8999876333
Q ss_pred HHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEee
Q 010211 350 VPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVML 405 (515)
Q Consensus 350 v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmL 405 (515)
..+++.|++.|.|.+.-+ .+|+ ++..+...|+|.+.+
T Consensus 99 -----~~v~~~~~~~g~~~i~G~---------~t~~-----e~~~A~~~Gad~v~~ 135 (214)
T 1wbh_A 99 -----EPLLKAATEGTIPLIPGI---------STVS-----ELMLGMDYGLKEFKF 135 (214)
T ss_dssp -----HHHHHHHHHSSSCEEEEE---------SSHH-----HHHHHHHTTCCEEEE
T ss_pred -----HHHHHHHHHhCCCEEEec---------CCHH-----HHHHHHHCCCCEEEE
Confidence 368899999999988632 2243 345788999999988
No 65
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=88.27 E-value=5 Score=40.33 Aligned_cols=113 Identities=22% Similarity=0.242 Sum_probs=66.9
Q ss_pred HHHhhcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh-cCeeEEcCCcccccCCCC
Q 010211 270 WEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIE 348 (515)
Q Consensus 270 ~~dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDgImIgrgDLg~elg~e 348 (515)
.+.++.+++.|+|+|.+++-...+.+.. +++. .++++.++-+.+-.. ...+. +|+|.+--.+.+-..|-.
T Consensus 92 ~~~~~~~~~~g~d~V~l~~g~p~~~~~~----l~~~--g~~v~~~v~s~~~a~---~a~~~GaD~i~v~g~~~GG~~G~~ 162 (326)
T 3bo9_A 92 DDLVKVCIEEKVPVVTFGAGNPTKYIRE----LKEN--GTKVIPVVASDSLAR---MVERAGADAVIAEGMESGGHIGEV 162 (326)
T ss_dssp HHHHHHHHHTTCSEEEEESSCCHHHHHH----HHHT--TCEEEEEESSHHHHH---HHHHTTCSCEEEECTTSSEECCSS
T ss_pred HHHHHHHHHCCCCEEEECCCCcHHHHHH----HHHc--CCcEEEEcCCHHHHH---HHHHcCCCEEEEECCCCCccCCCc
Confidence 3456667788999999887654443333 3332 578888887655443 33344 899999322233222311
Q ss_pred CHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeec
Q 010211 349 DVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (515)
Q Consensus 349 ~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs 406 (515)
.-....+++ ....+.|++.+. +.-+ ..|+..++..|+|++++.
T Consensus 163 ~~~~ll~~i---~~~~~iPviaaG---------GI~~---~~dv~~al~~GA~gV~vG 205 (326)
T 3bo9_A 163 TTFVLVNKV---SRSVNIPVIAAG---------GIAD---GRGMAAAFALGAEAVQMG 205 (326)
T ss_dssp CHHHHHHHH---HHHCSSCEEEES---------SCCS---HHHHHHHHHHTCSEEEES
T ss_pred cHHHHHHHH---HHHcCCCEEEEC---------CCCC---HHHHHHHHHhCCCEEEec
Confidence 122222333 334589998853 3332 236677888899999975
No 66
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=88.22 E-value=4.4 Score=46.94 Aligned_cols=120 Identities=14% Similarity=0.264 Sum_probs=68.6
Q ss_pred hhcchhcCCcEEEeccc---------------CCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh-----cC
Q 010211 273 IKFGVDNQVDFYAVSFV---------------KDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-----SD 332 (515)
Q Consensus 273 I~~al~~gvD~ValSfV---------------rsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-----sD 332 (515)
++.+.+.|+|+|.+.+- ++.+.+.++-+.+.+. -++.|++|+ ++ .++++.+++.. +|
T Consensus 654 a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~-~~~Pv~vK~-~~-~~~~~~~~a~~~~~~G~d 730 (1025)
T 1gte_A 654 SRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQA-VQIPFFAKL-TP-NVTDIVSIARAAKEGGAD 730 (1025)
T ss_dssp HHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHH-CSSCEEEEE-CS-CSSCHHHHHHHHHHHTCS
T ss_pred HHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHh-hCCceEEEe-CC-ChHHHHHHHHHHHHcCCC
Confidence 34455689999988542 3333344443444332 257899998 33 44556666554 79
Q ss_pred eeEEc-----------------------CCcccccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccccccccCCCcChHH
Q 010211 333 GAMVA-----------------------RGDLGAELPIEDVPLLQEDIIRRCRSM-QKPVIVATNMLESMIDHPTPTRAE 388 (515)
Q Consensus 333 gImIg-----------------------rgDLg~elg~e~v~~aqk~Ii~~c~~a-GKPvivATqmLeSMi~~~~PtrAE 388 (515)
+|.+. |...+.--|....+.....+-+..++. +.|+|.. .+.-+
T Consensus 731 ~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~v~~v~~~~~~ipvi~~---------GGI~s--- 798 (1025)
T 1gte_A 731 GVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIARALPGFPILAT---------GGIDS--- 798 (1025)
T ss_dssp EEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHHHHHHHHHSTTCCEEEE---------SSCCS---
T ss_pred EEEEeccccccccccccccccccccccccccCCCCCcccchhHHHHHHHHHHHHcCCCCEEEe---------cCcCC---
Confidence 99981 111111113233343344333444455 7898873 34444
Q ss_pred HhHHHHHHHhCCcEEeecc
Q 010211 389 VSDIAIAVREGADAVMLSG 407 (515)
Q Consensus 389 v~DvanaV~~G~D~vmLs~ 407 (515)
..|+..++..|+|+||+..
T Consensus 799 ~~da~~~l~~Ga~~v~vg~ 817 (1025)
T 1gte_A 799 AESGLQFLHSGASVLQVCS 817 (1025)
T ss_dssp HHHHHHHHHTTCSEEEESH
T ss_pred HHHHHHHHHcCCCEEEEee
Confidence 3467788889999999964
No 67
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=87.83 E-value=3.9 Score=39.27 Aligned_cols=103 Identities=15% Similarity=0.214 Sum_probs=67.0
Q ss_pred HHhhcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh-cCeeEEcCCcccccCCCCC
Q 010211 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIED 349 (515)
Q Consensus 271 ~dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDgImIgrgDLg~elg~e~ 349 (515)
+.++.+++.|++.|-+.+ ++......++.+-++. .++.+-+- |.---+.++.-+++ +|+++.+-.|
T Consensus 33 ~~~~al~~gGv~~iel~~-k~~~~~~~i~~l~~~~-~~l~vgaG--tvl~~d~~~~A~~aGAd~v~~p~~d--------- 99 (224)
T 1vhc_A 33 PLADTLAKNGLSVAEITF-RSEAAADAIRLLRANR-PDFLIAAG--TVLTAEQVVLAKSSGADFVVTPGLN--------- 99 (224)
T ss_dssp HHHHHHHHTTCCEEEEET-TSTTHHHHHHHHHHHC-TTCEEEEE--SCCSHHHHHHHHHHTCSEEECSSCC---------
T ss_pred HHHHHHHHcCCCEEEEec-cCchHHHHHHHHHHhC-cCcEEeeC--cEeeHHHHHHHHHCCCCEEEECCCC---------
Confidence 555777889999999985 5555555555544443 34554443 22222555555555 8999766433
Q ss_pred HHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEee
Q 010211 350 VPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVML 405 (515)
Q Consensus 350 v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmL 405 (515)
..+++.|++.|+|++..+ .+|+. +..+...|+|.+.+
T Consensus 100 -----~~v~~~ar~~g~~~i~Gv---------~t~~e-----~~~A~~~Gad~vk~ 136 (224)
T 1vhc_A 100 -----PKIVKLCQDLNFPITPGV---------NNPMA-----IEIALEMGISAVKF 136 (224)
T ss_dssp -----HHHHHHHHHTTCCEECEE---------CSHHH-----HHHHHHTTCCEEEE
T ss_pred -----HHHHHHHHHhCCCEEecc---------CCHHH-----HHHHHHCCCCEEEE
Confidence 456789999999987632 22433 45788999999998
No 68
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=87.59 E-value=6.8 Score=37.57 Aligned_cols=131 Identities=13% Similarity=0.037 Sum_probs=74.1
Q ss_pred HHHhhcchhcCCcEEEeccc--CCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh-cCeeEEcCCccccc--
Q 010211 270 WEDIKFGVDNQVDFYAVSFV--KDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAE-- 344 (515)
Q Consensus 270 ~~dI~~al~~gvD~ValSfV--rsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDgImIgrgDLg~e-- 344 (515)
.+++..+.+.|+|+|.+--. .+++.+.++-+++++. .+.+++.+-|.+- .....+. +|.|-+.-.++...
T Consensus 91 ~~~i~~~~~aGad~I~l~~~~~~~p~~l~~~i~~~~~~--g~~v~~~v~t~ee---a~~a~~~Gad~Ig~~~~g~t~~~~ 165 (229)
T 3q58_A 91 LQDVDALAQAGADIIAFDASFRSRPVDIDSLLTRIRLH--GLLAMADCSTVNE---GISCHQKGIEFIGTTLSGYTGPIT 165 (229)
T ss_dssp HHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHT--TCEEEEECSSHHH---HHHHHHTTCSEEECTTTTSSSSCC
T ss_pred HHHHHHHHHcCCCEEEECccccCChHHHHHHHHHHHHC--CCEEEEecCCHHH---HHHHHhCCCCEEEecCccCCCCCc
Confidence 34556667889999876432 3556666666666553 5667776554322 2222333 78886532222111
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecccccCCCCHHHHHHHHHH
Q 010211 345 LPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHT 424 (515)
Q Consensus 345 lg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ETa~G~yPveaV~~m~~ 424 (515)
...+.+ ...+++ .+.+.|++. ..+.-|.. |+..+...|+|++++- +++.+ |-...+.+.+
T Consensus 166 ~~~~~~-~li~~l----~~~~ipvIA---------~GGI~t~~---d~~~~~~~GadgV~VG--sai~~-p~~~~~~f~~ 225 (229)
T 3q58_A 166 PVEPDL-AMVTQL----SHAGCRVIA---------EGRYNTPA---LAANAIEHGAWAVTVG--SAITR-IEHICQWFSH 225 (229)
T ss_dssp CSSCCH-HHHHHH----HTTTCCEEE---------ESSCCSHH---HHHHHHHTTCSEEEEC--HHHHC-HHHHHHHHHH
T ss_pred CCCCCH-HHHHHH----HHcCCCEEE---------ECCCCCHH---HHHHHHHcCCCEEEEc--hHhcC-hHHHHHHHHH
Confidence 112333 223333 233899987 44555544 5567778899999985 55554 6666666554
Q ss_pred H
Q 010211 425 V 425 (515)
Q Consensus 425 I 425 (515)
.
T Consensus 226 ~ 226 (229)
T 3q58_A 226 A 226 (229)
T ss_dssp H
T ss_pred H
Confidence 3
No 69
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=87.54 E-value=7.7 Score=39.31 Aligned_cols=158 Identities=9% Similarity=0.008 Sum_probs=97.3
Q ss_pred CCHhhHHHh-h-cchhcCCcEEEe-cccCCHHHHHHHHHHHHh-----cCCCceEEEEecChhhhhcHHHHHhh-cCee-
Q 010211 265 ITDKDWEDI-K-FGVDNQVDFYAV-SFVKDAKVVHELKDYLKS-----CNADIHVIVKIESADSIPNLHSIISA-SDGA- 334 (515)
Q Consensus 265 ltekD~~dI-~-~al~~gvD~Val-SfVrsa~dv~~vr~~l~~-----~~~~i~IIaKIEt~~aveNldeIl~~-sDgI- 334 (515)
++.+|+..| + ...+.|+|.|=+ +|+.+..+.+.++...+. .-.++.+.+-+=+.. .++..++. .|.|
T Consensus 38 ~~~~~k~~i~~~~L~~~Gv~~IE~g~~~~~~~~~~~v~~~~~~~~~~~~~~~~~i~~l~~~~~---~i~~a~~~g~~~v~ 114 (337)
T 3ble_A 38 FSTSEKLNIAKFLLQKLNVDRVEIASARVSKGELETVQKIMEWAATEQLTERIEILGFVDGNK---TVDWIKDSGAKVLN 114 (337)
T ss_dssp CCHHHHHHHHHHHHHTTCCSEEEEEETTSCTTHHHHHHHHHHHHHHTTCGGGEEEEEESSTTH---HHHHHHHHTCCEEE
T ss_pred cCHHHHHHHHHHHHHHcCCCEEEEeCCCCChhHHHHHHHHHhhhhhhccCCCCeEEEEccchh---hHHHHHHCCCCEEE
Confidence 577777555 4 344679999888 556678666666554432 223456666655544 45555554 5554
Q ss_pred -EEcCCccc----ccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHH-HHHhCCcEEeeccc
Q 010211 335 -MVARGDLG----AELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAI-AVREGADAVMLSGE 408 (515)
Q Consensus 335 -mIgrgDLg----~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~Dvan-aV~~G~D~vmLs~E 408 (515)
+++-.|+- .....++.....+++++.++++|+.|.+.... .-..+.-+...+.+++. +...|+|.+.|. +
T Consensus 115 i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~-D 190 (337)
T 3ble_A 115 LLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLED---WSNGFRNSPDYVKSLVEHLSKEHIERIFLP-D 190 (337)
T ss_dssp EEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEET---HHHHHHHCHHHHHHHHHHHHTSCCSEEEEE-C
T ss_pred EEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEE---CCCCCcCCHHHHHHHHHHHHHcCCCEEEEe-c
Confidence 43333321 12233566778889999999999998764211 00011122233444444 456699999985 7
Q ss_pred ccCCCCHHHHHHHHHHHHHHH
Q 010211 409 TAHGKFPLKAVKVMHTVALRT 429 (515)
Q Consensus 409 Ta~G~yPveaV~~m~~I~~~a 429 (515)
|.=.-.|-+.-+.+..+..+.
T Consensus 191 T~G~~~P~~v~~lv~~l~~~~ 211 (337)
T 3ble_A 191 TLGVLSPEETFQGVDSLIQKY 211 (337)
T ss_dssp TTCCCCHHHHHHHHHHHHHHC
T ss_pred CCCCcCHHHHHHHHHHHHHhc
Confidence 887788999988888887765
No 70
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=87.13 E-value=5.2 Score=39.74 Aligned_cols=156 Identities=14% Similarity=0.061 Sum_probs=92.3
Q ss_pred CCHhhHHHh-hcchhcCCcEEEecccCCH------HHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh-cCeeEE
Q 010211 265 ITDKDWEDI-KFGVDNQVDFYAVSFVKDA------KVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMV 336 (515)
Q Consensus 265 ltekD~~dI-~~al~~gvD~ValSfVrsa------~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDgImI 336 (515)
++.+++..| +...+.|++.|-+.|-.++ .|..++...+.+ ..++.+.+.+.+. +.++.-++. .|.|+|
T Consensus 27 ~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~~~~~d~~~~~~~~~~-~~~~~~~~l~~~~---~~i~~a~~aG~~~v~i 102 (302)
T 2ftp_A 27 IEVADKIRLVDDLSAAGLDYIEVGSFVSPKWVPQMAGSAEVFAGIRQ-RPGVTYAALAPNL---KGFEAALESGVKEVAV 102 (302)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCC-CTTSEEEEECCSH---HHHHHHHHTTCCEEEE
T ss_pred CCHHHHHHHHHHHHHcCcCEEEECCCcCccccccccCHHHHHHHhhh-cCCCEEEEEeCCH---HHHHHHHhCCcCEEEE
Confidence 466777555 4555689998877642222 344343333433 2456666666433 334444444 788776
Q ss_pred -c-CCcc----cccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccC-C---CcChHHHhHHHH-HHHhCCcEEee
Q 010211 337 -A-RGDL----GAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDH-P---TPTRAEVSDIAI-AVREGADAVML 405 (515)
Q Consensus 337 -g-rgDL----g~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~-~---~PtrAEv~Dvan-aV~~G~D~vmL 405 (515)
. -.|+ -..+++++.....+++++.|+++|+.|-..= +++.. + .-+..++.+++. +...|+|.+.|
T Consensus 103 ~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l----~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l 178 (302)
T 2ftp_A 103 FAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYI----SCVLGCPYDGDVDPRQVAWVARELQQMGCYEVSL 178 (302)
T ss_dssp EEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEE----ECTTCBTTTBCCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred EEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEE----EEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 2 2242 1224567888888999999999999984210 11111 1 122233444443 44789999999
Q ss_pred cccccCCCCHHHHHHHHHHHHHHH
Q 010211 406 SGETAHGKFPLKAVKVMHTVALRT 429 (515)
Q Consensus 406 s~ETa~G~yPveaV~~m~~I~~~a 429 (515)
. +|.=...|-+.-+.+..|.+..
T Consensus 179 ~-DT~G~~~P~~~~~lv~~l~~~~ 201 (302)
T 2ftp_A 179 G-DTIGVGTAGATRRLIEAVASEV 201 (302)
T ss_dssp E-ESSSCCCHHHHHHHHHHHTTTS
T ss_pred e-CCCCCcCHHHHHHHHHHHHHhC
Confidence 8 6665567988888888776544
No 71
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=87.09 E-value=3.3 Score=39.03 Aligned_cols=101 Identities=14% Similarity=0.132 Sum_probs=63.8
Q ss_pred HHhhcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh-cCeeEEcCCcccccCCCCC
Q 010211 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIED 349 (515)
Q Consensus 271 ~dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDgImIgrgDLg~elg~e~ 349 (515)
+.++.+++.|++.|-+.+ ++......++. +.+ .+..+-+-. .---+.++.-++. +|++..+-.|.
T Consensus 29 ~~~~~l~~gGv~~iel~~-k~~~~~~~i~~-~~~--~~~~~gag~--vl~~d~~~~A~~~GAd~v~~~~~d~-------- 94 (207)
T 2yw3_A 29 GLARVLEEEGVGALEITL-RTEKGLEALKA-LRK--SGLLLGAGT--VRSPKEAEAALEAGAAFLVSPGLLE-------- 94 (207)
T ss_dssp HHHHHHHHTTCCEEEEEC-SSTHHHHHHHH-HTT--SSCEEEEES--CCSHHHHHHHHHHTCSEEEESSCCH--------
T ss_pred HHHHHHHHcCCCEEEEeC-CChHHHHHHHH-HhC--CCCEEEeCe--EeeHHHHHHHHHcCCCEEEcCCCCH--------
Confidence 455677888999999885 55555443433 333 444444433 2223555555555 89998653222
Q ss_pred HHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEee
Q 010211 350 VPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVML 405 (515)
Q Consensus 350 v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmL 405 (515)
.+++.|++.|.|.+.-+ .+|+ ++..+...|+|.+.+
T Consensus 95 ------~v~~~~~~~g~~~i~G~---------~t~~-----e~~~A~~~Gad~v~~ 130 (207)
T 2yw3_A 95 ------EVAALAQARGVPYLPGV---------LTPT-----EVERALALGLSALKF 130 (207)
T ss_dssp ------HHHHHHHHHTCCEEEEE---------CSHH-----HHHHHHHTTCCEEEE
T ss_pred ------HHHHHHHHhCCCEEecC---------CCHH-----HHHHHHHCCCCEEEE
Confidence 67888999999988632 1233 345778899999988
No 72
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=86.98 E-value=6.6 Score=38.77 Aligned_cols=129 Identities=18% Similarity=0.156 Sum_probs=77.6
Q ss_pred HhhcchhcCCcEEEec-ccCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh-cCeeEEcCCccccc-CCCC
Q 010211 272 DIKFGVDNQVDFYAVS-FVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAE-LPIE 348 (515)
Q Consensus 272 dI~~al~~gvD~ValS-fVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDgImIgrgDLg~e-lg~e 348 (515)
.+..+...|+|+|.+. -.-+.+++.++.++..+.|- .+++-+-|.+- ++..++. +|.|-+...||... .+++
T Consensus 127 qv~~A~~~GAD~VlLi~a~l~~~~l~~l~~~a~~lGl--~~lvev~t~ee---~~~A~~~Gad~IGv~~r~l~~~~~dl~ 201 (272)
T 3qja_A 127 QIHEARAHGADMLLLIVAALEQSVLVSMLDRTESLGM--TALVEVHTEQE---ADRALKAGAKVIGVNARDLMTLDVDRD 201 (272)
T ss_dssp HHHHHHHTTCSEEEEEGGGSCHHHHHHHHHHHHHTTC--EEEEEESSHHH---HHHHHHHTCSEEEEESBCTTTCCBCTT
T ss_pred HHHHHHHcCCCEEEEecccCCHHHHHHHHHHHHHCCC--cEEEEcCCHHH---HHHHHHCCCCEEEECCCcccccccCHH
Confidence 3555667899999872 22345666666666665544 34555544433 3333333 89999997776432 2333
Q ss_pred CHHHHHHHHHHHHHhc--CCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecccccCCCCHHHHHHHHHH
Q 010211 349 DVPLLQEDIIRRCRSM--QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHT 424 (515)
Q Consensus 349 ~v~~aqk~Ii~~c~~a--GKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ETa~G~yPveaV~~m~~ 424 (515)
.+ +++ +... ++|++. ..+.-|.. |+..+...|+|+++.-.---...-|-++++.+..
T Consensus 202 ~~----~~l---~~~v~~~~pvVa---------egGI~t~e---dv~~l~~~GadgvlVGsal~~a~dp~~~~~~l~~ 260 (272)
T 3qja_A 202 CF----ARI---APGLPSSVIRIA---------ESGVRGTA---DLLAYAGAGADAVLVGEGLVTSGDPRAAVADLVT 260 (272)
T ss_dssp HH----HHH---GGGSCTTSEEEE---------ESCCCSHH---HHHHHHHTTCSEEEECHHHHTCSCHHHHHHHHHT
T ss_pred HH----HHH---HHhCcccCEEEE---------ECCCCCHH---HHHHHHHcCCCEEEEcHHHhCCCCHHHHHHHHHh
Confidence 22 222 2233 678776 44555544 5567778899999985444456678888887753
No 73
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=86.96 E-value=1.5 Score=41.37 Aligned_cols=137 Identities=10% Similarity=0.046 Sum_probs=75.5
Q ss_pred hcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceE-EEEecChhhhhcHHHHHhh-cCeeEEcCCcccccCCCCCHH
Q 010211 274 KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHV-IVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIEDVP 351 (515)
Q Consensus 274 ~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~I-IaKIEt~~aveNldeIl~~-sDgImIgrgDLg~elg~e~v~ 351 (515)
+.+.+.|+|++.+......+.+.++.+.+++.|....+ +.-.-|. +.+.++.+. .|.+.+.++-.+..-|..-.+
T Consensus 77 ~~~~~aGad~i~vh~~~~~~~~~~~~~~~~~~g~~~~~d~l~~~T~---~~~~~~~~~g~d~v~~~~~~~~~~~g~~~~~ 153 (218)
T 3jr2_A 77 RMAFEAGADWITVSAAAHIATIAACKKVADELNGEIQIEIYGNWTM---QDAKAWVDLGITQAIYHRSRDAELAGIGWTT 153 (218)
T ss_dssp HHHHHHTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECCSSCCH---HHHHHHHHTTCCEEEEECCHHHHHHTCCSCH
T ss_pred HHHHhcCCCEEEEecCCCHHHHHHHHHHHHHhCCccceeeeecCCH---HHHHHHHHcCccceeeeeccccccCCCcCCH
Confidence 45567899999887554445567777777776655443 3344564 344455543 776655443221111211122
Q ss_pred HHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecccccCCCCHHHHHHHHHHHHHH
Q 010211 352 LLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALR 428 (515)
Q Consensus 352 ~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~ 428 (515)
...++|-+.+ ....|+.+. ..-.|..+. .++..|+|++..-+--....-|.+++ .+.+..++
T Consensus 154 ~~l~~i~~~~-~~~~pi~v~--------GGI~~~~~~-----~~~~aGAd~vvvGsaI~~a~dp~~a~-~l~~~~~~ 215 (218)
T 3jr2_A 154 DDLDKMRQLS-ALGIELSIT--------GGIVPEDIY-----LFEGIKTKTFIAGRALAGAEGQQTAA-ALREQIDR 215 (218)
T ss_dssp HHHHHHHHHH-HTTCEEEEE--------SSCCGGGGG-----GGTTSCEEEEEESGGGSHHHHHHHHH-HHHHHHHH
T ss_pred HHHHHHHHHh-CCCCCEEEE--------CCCCHHHHH-----HHHHcCCCEEEEchhhcCCCCHHHHH-HHHHHHHh
Confidence 2333332222 346777663 333444332 57888999999864433344588888 77665553
No 74
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=86.28 E-value=7.8 Score=39.96 Aligned_cols=120 Identities=21% Similarity=0.265 Sum_probs=69.0
Q ss_pred hHHHhhcchhcCCcEEEe--cccCCHHHHHHHHHHHHhcCCCceEEE-EecChhhhhcHHHHHhh-cCeeEEcCCccc--
Q 010211 269 DWEDIKFGVDNQVDFYAV--SFVKDAKVVHELKDYLKSCNADIHVIV-KIESADSIPNLHSIISA-SDGAMVARGDLG-- 342 (515)
Q Consensus 269 D~~dI~~al~~gvD~Val--SfVrsa~dv~~vr~~l~~~~~~i~IIa-KIEt~~aveNldeIl~~-sDgImIgrgDLg-- 342 (515)
+.+.++.+++.|+|+|.+ ++- ..+.+.++-+.+.+.-.++.|++ .+-+.+ ......+. +|+|.++-+-=+
T Consensus 154 ~~~~a~~~~~~G~d~i~i~~~~g-~~~~~~e~i~~ir~~~~~~pviv~~v~~~~---~a~~a~~~Gad~I~vg~~~G~~~ 229 (404)
T 1eep_A 154 TIERVEELVKAHVDILVIDSAHG-HSTRIIELIKKIKTKYPNLDLIAGNIVTKE---AALDLISVGADCLKVGIGPGSIC 229 (404)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCC-SSHHHHHHHHHHHHHCTTCEEEEEEECSHH---HHHHHHTTTCSEEEECSSCSTTS
T ss_pred HHHHHHHHHHCCCCEEEEeCCCC-ChHHHHHHHHHHHHHCCCCeEEEcCCCcHH---HHHHHHhcCCCEEEECCCCCcCc
Confidence 455666777889999986 432 23333333333333322566775 455543 23333344 899999521100
Q ss_pred -----ccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEee
Q 010211 343 -----AELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVML 405 (515)
Q Consensus 343 -----~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmL 405 (515)
-..|.+. ......+.+.+...+.||+.+. +.-+ -.|+..++..|+|++++
T Consensus 230 ~~~~~~~~g~p~-~~~l~~v~~~~~~~~ipVia~G---------GI~~---~~d~~~ala~GAd~V~i 284 (404)
T 1eep_A 230 TTRIVAGVGVPQ-ITAICDVYEACNNTNICIIADG---------GIRF---SGDVVKAIAAGADSVMI 284 (404)
T ss_dssp HHHHHHCCCCCH-HHHHHHHHHHHTTSSCEEEEES---------CCCS---HHHHHHHHHHTCSEEEE
T ss_pred CccccCCCCcch-HHHHHHHHHHHhhcCceEEEEC---------CCCC---HHHHHHHHHcCCCHHhh
Confidence 0123332 3445566666666789998743 3333 34777899999999998
No 75
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=85.88 E-value=5.2 Score=38.79 Aligned_cols=137 Identities=13% Similarity=0.010 Sum_probs=81.9
Q ss_pred HHhhcchhcCCcEEEecccCCHHHHHHHHHHHHhc---------CCCceEEEEecChhhhhcHHHHHhhcCeeEE---cC
Q 010211 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSC---------NADIHVIVKIESADSIPNLHSIISASDGAMV---AR 338 (515)
Q Consensus 271 ~dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~---------~~~i~IIaKIEt~~aveNldeIl~~sDgImI---gr 338 (515)
..++.+.+.|+|+|.+-. ....+.....+.+.+. |..+.+...-+|+ ++.+++++..+|.|.+ .|
T Consensus 83 ~~i~~~~~aGAd~itvH~-ea~~~~~~~i~~i~~~~~~~~~~~~g~~~gv~l~p~Tp--~~~l~~~l~~~D~vlvMsv~p 159 (237)
T 3cu2_A 83 EVAKAVVANGANLVTLQL-EQYHDFALTIEWLAKQKTTYANQVYPVLIGACLCPETP--ISELEPYLDQIDVIQLLTLDP 159 (237)
T ss_dssp HHHHHHHHTTCSEEEEET-TCTTSHHHHHHHHTTCEEEETTEEEECEEEEEECTTSC--GGGGTTTTTTCSEEEEESEET
T ss_pred HHHHHHHHcCCCEEEEec-CCcccHHHHHHHHHhcccccccccCCceEEEEEeCCCh--HHHHHHHhhcCceeeeeeecc
Confidence 455667789999988764 4446676777777766 5555555555665 6678888888998877 55
Q ss_pred CcccccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccccccccCCCcChHHHhHHHHHHH--hCCcEEeecccccCCCC
Q 010211 339 GDLGAELPIEDVPLLQEDIIRRCRSM--QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVR--EGADAVMLSGETAHGKF 414 (515)
Q Consensus 339 gDLg~elg~e~v~~aqk~Ii~~c~~a--GKPvivATqmLeSMi~~~~PtrAEv~DvanaV~--~G~D~vmLs~ETa~G~y 414 (515)
|==+... .+....-.+++-+...+. +.|+.+. ..-.+. .+..++. .|+|++..-+---.. -
T Consensus 160 gfggq~f-~~~~l~ki~~lr~~~~~~~~~~~I~vd--------GGI~~~-----~~~~~~~~~aGad~~VvGSaIf~~-d 224 (237)
T 3cu2_A 160 RNGTKYP-SELILDRVIQVEKRLGNRRVEKLINID--------GSMTLE-----LAKYFKQGTHQIDWLVSGSALFSG-E 224 (237)
T ss_dssp TTTEECC-HHHHHHHHHHHHHHHGGGGGGCEEEEE--------SSCCHH-----HHHHHHHSSSCCCCEEECGGGGSS-C
T ss_pred CcCCeec-ChhHHHHHHHHHHHHHhcCCCceEEEE--------CCcCHH-----HHHHHHHhCCCCcEEEEeeHHhCC-C
Confidence 4222222 122223333333333332 4666553 222222 2345677 799999976443333 6
Q ss_pred HHHHHHHHHHH
Q 010211 415 PLKAVKVMHTV 425 (515)
Q Consensus 415 PveaV~~m~~I 425 (515)
|.++++.+++.
T Consensus 225 ~~~~~~~l~~~ 235 (237)
T 3cu2_A 225 LKTNLKVWKSS 235 (237)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 88999888653
No 76
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=85.35 E-value=4.7 Score=39.44 Aligned_cols=128 Identities=14% Similarity=0.084 Sum_probs=76.7
Q ss_pred CHhhH-HHhhcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecChhhh----------hcHHHHHhh-cCe
Q 010211 266 TDKDW-EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSI----------PNLHSIISA-SDG 333 (515)
Q Consensus 266 tekD~-~dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~av----------eNldeIl~~-sDg 333 (515)
+..|. +.++.+.++|++.|+++. .-+.... ..++.++.++++..++ ...++.++. +|+
T Consensus 39 ~~~di~~~~~~a~~~~~~av~v~~----~~v~~~~------~~~~~liv~~~~~~~~~g~~~~~~~~~~ve~Ai~~Ga~~ 108 (263)
T 1w8s_A 39 DSADPEYILRLARDAGFDGVVFQR----GIAEKYY------DGSVPLILKLNGKTTLYNGEPVSVANCSVEEAVSLGASA 108 (263)
T ss_dssp GGGCHHHHHHHHHHHTCSEEEECH----HHHHHHC------CSSSCEEEECEECCTTCCSSCCCEESSCHHHHHHTTCSE
T ss_pred chhhHHHHHHHHHhhCCCEEEECH----HHHHHhh------cCCCcEEEEEeCCCCcCCCCccchHHHHHHHHHHCCCCE
Confidence 55666 444778899999998762 2222222 3457788888776665 456666666 777
Q ss_pred eEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHH-HHHHHhCCcEEeec
Q 010211 334 AMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDI-AIAVREGADAVMLS 406 (515)
Q Consensus 334 ImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~Dv-anaV~~G~D~vmLs 406 (515)
|-+ |-.++ +-...++....+++.+.|+++|.|+|+-+ .+.---.....+..++... --+...|+|.+=.+
T Consensus 109 v~~-~~nig-~~~~~~~~~~~~~v~~~~~~~~~~vIi~~-~~~G~~~~~~~s~~~i~~a~~~a~~~GAD~vkt~ 179 (263)
T 1w8s_A 109 VGY-TIYPG-SGFEWKMFEELARIKRDAVKFDLPLVVES-FPRGGKVVNETAPEIVAYAARIALELGADAMKIK 179 (263)
T ss_dssp EEE-EECTT-STTHHHHHHHHHHHHHHHHHHTCCEEEEE-CCCSTTCCCTTCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred EEE-EEecC-CcCHHHHHHHHHHHHHHHHHcCCeEEEEe-eCCCCccccCCCHHHHHHHHHHHHHcCCCEEEEc
Confidence 644 22222 11234677777899999999999998621 1100000000033455443 45677899998876
No 77
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=85.12 E-value=8 Score=40.83 Aligned_cols=121 Identities=21% Similarity=0.290 Sum_probs=70.4
Q ss_pred hHHHhhcchhcCCcEEEecccC--CHHHHHHHHHHHHhcCCCceEEEE-ecChhhhhcHHHHHhh-cCeeEEcCCccc--
Q 010211 269 DWEDIKFGVDNQVDFYAVSFVK--DAKVVHELKDYLKSCNADIHVIVK-IESADSIPNLHSIISA-SDGAMVARGDLG-- 342 (515)
Q Consensus 269 D~~dI~~al~~gvD~ValSfVr--sa~dv~~vr~~l~~~~~~i~IIaK-IEt~~aveNldeIl~~-sDgImIgrgDLg-- 342 (515)
..+.+.+.++.|+|.|.+.+.. ....+..++. +.+.-.++.|+++ +-|.+.. ....+. +|+|.++-+-=+
T Consensus 238 ~~~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~-i~~~~p~~pvi~g~~~t~e~a---~~l~~~G~d~I~v~~~~G~~~ 313 (494)
T 1vrd_A 238 TMERVEKLVKAGVDVIVIDTAHGHSRRVIETLEM-IKADYPDLPVVAGNVATPEGT---EALIKAGADAVKVGVGPGSIC 313 (494)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHH-HHHHCTTSCEEEEEECSHHHH---HHHHHTTCSEEEECSSCSTTC
T ss_pred HHHHHHHHHHhCCCEEEEEecCCchHHHHHHHHH-HHHHCCCceEEeCCcCCHHHH---HHHHHcCCCEEEEcCCCCccc
Confidence 3567788889999999875542 2222222333 3222223555553 4444333 333334 899999543101
Q ss_pred -----ccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeec
Q 010211 343 -----AELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (515)
Q Consensus 343 -----~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs 406 (515)
-..|.+. ..+...+.+.++..+.|+|.+. +.-+ -.|++.++..|+|++++.
T Consensus 314 ~~~~~~~~g~p~-~~~l~~v~~~~~~~~ipvia~G---------GI~~---~~di~kala~GAd~V~iG 369 (494)
T 1vrd_A 314 TTRVVAGVGVPQ-LTAVMECSEVARKYDVPIIADG---------GIRY---SGDIVKALAAGAESVMVG 369 (494)
T ss_dssp HHHHHHCCCCCH-HHHHHHHHHHHHTTTCCEEEES---------CCCS---HHHHHHHHHTTCSEEEES
T ss_pred cccccCCCCccH-HHHHHHHHHHHhhcCCCEEEEC---------CcCC---HHHHHHHHHcCCCEEEEC
Confidence 0112333 4455667777777799999843 3333 347789999999999964
No 78
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=84.07 E-value=6.5 Score=38.84 Aligned_cols=154 Identities=13% Similarity=0.111 Sum_probs=92.2
Q ss_pred CCCCHhhHHHh-hcchhc--CCcEEEecccCCHHHHHHHHHHHHhcCC-CceEEEEecChhhhhcHHHHHhh--------
Q 010211 263 PSITDKDWEDI-KFGVDN--QVDFYAVSFVKDAKVVHELKDYLKSCNA-DIHVIVKIESADSIPNLHSIISA-------- 330 (515)
Q Consensus 263 p~ltekD~~dI-~~al~~--gvD~ValSfVrsa~dv~~vr~~l~~~~~-~i~IIaKIEt~~aveNldeIl~~-------- 330 (515)
|..|+.|.+.+ +.+.++ |++.|+++ +..+...+++++..+. .+.|.+-|==|.|-.+.+..+..
T Consensus 23 p~~t~~~i~~lc~eA~~~~~~~~aVcV~----p~~v~~a~~~L~~~g~~~v~v~tVigFP~G~~~~~~Kv~E~~~Av~~G 98 (260)
T 1p1x_A 23 DDDTDEKVIALCHQAKTPVGNTAAICIY----PRFIPIARKTLKEQGTPEIRIATVTNFPHGNDDIDIALAETRAAIAYG 98 (260)
T ss_dssp TTCCHHHHHHHHHHTEETTEECSEEECC----GGGHHHHHHHHHHTTCTTSEEEEEESTTTCCSCHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHhccCCceEEEEC----HHHHHHHHHHhhhcCCCCceEEEEeCCCCCCCcHHHHHHHHHHHHHcC
Confidence 56688887555 667778 89888764 5567777888864344 67777777444444444422221
Q ss_pred cCeeEE--cCCcccccCCCCCHHHHHHHHHHHHHhcCCcE--EEEeccccccccCCCcChHH-HhHH-HHHHHhCCcEEe
Q 010211 331 SDGAMV--ARGDLGAELPIEDVPLLQEDIIRRCRSMQKPV--IVATNMLESMIDHPTPTRAE-VSDI-AIAVREGADAVM 404 (515)
Q Consensus 331 sDgImI--grgDLg~elg~e~v~~aqk~Ii~~c~~aGKPv--ivATqmLeSMi~~~~PtrAE-v~Dv-anaV~~G~D~vm 404 (515)
+|.|=+ -.|-| .+=.++.+..-.+.+.++|...|+|+ |+.|-.| +..| +... --++..|+|.|=
T Consensus 99 AdEIDmVinig~l-~~g~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L---------~d~e~i~~a~~ia~eaGADfVK 168 (260)
T 1p1x_A 99 ADEVDVVFPYRAL-MAGNEQVGFDLVKACKEACAAANVLLKVIIETGEL---------KDEALIRKASEISIKAGADFIK 168 (260)
T ss_dssp CSEEEEECCHHHH-HTTCCHHHHHHHHHHHHHHHHTTCEEEEECCHHHH---------CSHHHHHHHHHHHHHTTCSEEE
T ss_pred CCEEEEeccHHhh-hCCCHHHHHHHHHHHHHHhcccCCeEEEEEecccC---------CcHHHHHHHHHHHHHhCCCEEE
Confidence 444411 11111 01013567778888899998878885 6644333 4555 3332 345678999987
Q ss_pred ecccccCCCCHHHHHHHHHHHHHHHh
Q 010211 405 LSGETAHGKFPLKAVKVMHTVALRTE 430 (515)
Q Consensus 405 Ls~ETa~G~yPveaV~~m~~I~~~aE 430 (515)
-|.-=.-|.--+|.|+.|.+.+++.-
T Consensus 169 TSTGf~~~gAt~e~v~lm~~~I~~~~ 194 (260)
T 1p1x_A 169 TSTGKVAVNATPESARIMMEVIRDMG 194 (260)
T ss_dssp CCCSCSSCCCCHHHHHHHHHHHHHHT
T ss_pred eCCCCCCCCCCHHHHHHHHHHHHHhc
Confidence 65211112224699999999888653
No 79
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=83.51 E-value=29 Score=34.95 Aligned_cols=158 Identities=13% Similarity=0.112 Sum_probs=98.7
Q ss_pred CCHhhHHHh-hcchhcCCcEEEecc-cCCHHHHHHHHHHHHhcCCCceEEEEe-cChhhhhcHHHHHhh--cC--eeEEc
Q 010211 265 ITDKDWEDI-KFGVDNQVDFYAVSF-VKDAKVVHELKDYLKSCNADIHVIVKI-ESADSIPNLHSIISA--SD--GAMVA 337 (515)
Q Consensus 265 ltekD~~dI-~~al~~gvD~ValSf-Vrsa~dv~~vr~~l~~~~~~i~IIaKI-Et~~aveNldeIl~~--sD--gImIg 337 (515)
++.+|+..| +.-.+.|+|.|=+.| +-++.|...++...+. ..++.+.+-. =+.++++..-+-+.- .| .++++
T Consensus 25 ~~~~~Kl~ia~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~-~~~~~i~~l~r~~~~~i~~a~~al~~ag~~~v~i~~s 103 (325)
T 3eeg_A 25 LNTEEKIIVAKALDELGVDVIEAGFPVSSPGDFNSVVEITKA-VTRPTICALTRAKEADINIAGEALRFAKRSRIHTGIG 103 (325)
T ss_dssp CCTTHHHHHHHHHHHHTCSEEEEECTTSCHHHHHHHHHHHHH-CCSSEEEEECCSCHHHHHHHHHHHTTCSSEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCCCCHhHHHHHHHHHHh-CCCCEEEEeecCCHHHHHHHHHhhcccCCCEEEEEec
Confidence 355676555 444567999987754 4578788777665544 3556665554 234454422121111 23 25666
Q ss_pred CCcccc----cCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHH-HhCCcEEeecccccCC
Q 010211 338 RGDLGA----ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAV-REGADAVMLSGETAHG 412 (515)
Q Consensus 338 rgDLg~----elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV-~~G~D~vmLs~ETa~G 412 (515)
-.|+-. ....++..+..+.+++.|+++|+.|.+... ....-+...+.+++..+ ..|+|.+-|. +|.=.
T Consensus 104 ~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~f~~~------d~~~~~~~~~~~~~~~~~~~G~~~i~l~-DT~G~ 176 (325)
T 3eeg_A 104 SSDIHIEHKLRSTRENILEMAVAAVKQAKKVVHEVEFFCE------DAGRADQAFLARMVEAVIEAGADVVNIP-DTTGY 176 (325)
T ss_dssp CSHHHHC----CCCTTGGGTTHHHHHHHHTTSSEEEEEEE------TGGGSCHHHHHHHHHHHHHHTCSEEECC-BSSSC
T ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEcc------ccccchHHHHHHHHHHHHhcCCCEEEec-CccCC
Confidence 666533 234577888889999999999999876432 11122233355555544 4599998885 88888
Q ss_pred CCHHHHHHHHHHHHHHHh
Q 010211 413 KFPLKAVKVMHTVALRTE 430 (515)
Q Consensus 413 ~yPveaV~~m~~I~~~aE 430 (515)
-.|.+.-+.+..+.++..
T Consensus 177 ~~P~~v~~lv~~l~~~~~ 194 (325)
T 3eeg_A 177 MLPWQYGERIKYLMDNVS 194 (325)
T ss_dssp CCHHHHHHHHHHHHHHCS
T ss_pred cCHHHHHHHHHHHHHhCC
Confidence 899998888888877654
No 80
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=83.23 E-value=16 Score=36.48 Aligned_cols=157 Identities=8% Similarity=0.069 Sum_probs=93.3
Q ss_pred CCCHhhHHHhh-cchhcCCcEEEecccCCH------HHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh-cCeeE
Q 010211 264 SITDKDWEDIK-FGVDNQVDFYAVSFVKDA------KVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAM 335 (515)
Q Consensus 264 ~ltekD~~dI~-~al~~gvD~ValSfVrsa------~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDgIm 335 (515)
.++..|+..|. ...+.|+|.|=+.|-.++ .|..++...+.+. .++.+.+-+.+.+ +++..++. +|.|.
T Consensus 24 ~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~-~~~~~~~l~~~~~---~i~~a~~~g~~~v~ 99 (307)
T 1ydo_A 24 WIATEDKITWINQLSRTGLSYIEITSFVHPKWIPALRDAIDVAKGIDRE-KGVTYAALVPNQR---GLENALEGGINEAC 99 (307)
T ss_dssp CCCHHHHHHHHHHHHTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCC-TTCEEEEECCSHH---HHHHHHHHTCSEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECCCcCcccccccCCHHHHHHHhhhc-CCCeEEEEeCCHH---hHHHHHhCCcCEEE
Confidence 35677776554 445679999877642222 3444444444332 4556656554433 34444444 56544
Q ss_pred --EcCCcc----cccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccC-C---CcChHHHhHHHH-HHHhCCcEEe
Q 010211 336 --VARGDL----GAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDH-P---TPTRAEVSDIAI-AVREGADAVM 404 (515)
Q Consensus 336 --IgrgDL----g~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~-~---~PtrAEv~Dvan-aV~~G~D~vm 404 (515)
++-.|+ -.....++.....+++++.++++|+.|-..= +|.+. + .-+...+.+++. +...|+|.+.
T Consensus 100 i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i----~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~ 175 (307)
T 1ydo_A 100 VFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYL----STVFGCPYEKDVPIEQVIRLSEALFEFGISELS 175 (307)
T ss_dssp EEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEE----ECTTCBTTTBCCCHHHHHHHHHHHHHHTCSCEE
T ss_pred EEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEE----EEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 444443 1222346677888999999999999985321 11111 1 223344555443 4578999999
Q ss_pred ecccccCCCCHHHHHHHHHHHHHHH
Q 010211 405 LSGETAHGKFPLKAVKVMHTVALRT 429 (515)
Q Consensus 405 Ls~ETa~G~yPveaV~~m~~I~~~a 429 (515)
|. +|.=...|-+.-+.+..+.++.
T Consensus 176 l~-DT~G~~~P~~v~~lv~~l~~~~ 199 (307)
T 1ydo_A 176 LG-DTIGAANPAQVETVLEALLARF 199 (307)
T ss_dssp EE-CSSCCCCHHHHHHHHHHHHTTS
T ss_pred Ec-CCCCCcCHHHHHHHHHHHHHhC
Confidence 96 8887788988888888776543
No 81
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=83.21 E-value=14 Score=33.75 Aligned_cols=129 Identities=9% Similarity=0.011 Sum_probs=69.7
Q ss_pred hcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh-cCeeEEcCC-c--ccccCCCCC
Q 010211 274 KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARG-D--LGAELPIED 349 (515)
Q Consensus 274 ~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDgImIgrg-D--Lg~elg~e~ 349 (515)
+.+.+.|+|+|-++.-. .++..++++. ....+..-+.|++-+. +..+. +|.+++++. + -... +.+.
T Consensus 80 ~~a~~~gad~v~l~~~~--~~~~~~~~~~----~~~~~~v~~~t~~e~~---~~~~~g~d~i~~~~~~~~~~~~~-~~~~ 149 (215)
T 1xi3_A 80 DVALAVDADGVQLGPED--MPIEVAKEIA----PNLIIGASVYSLEEAL---EAEKKGADYLGAGSVFPTKTKED-ARVI 149 (215)
T ss_dssp HHHHHHTCSEEEECTTS--CCHHHHHHHC----TTSEEEEEESSHHHHH---HHHHHTCSEEEEECSSCC----C-CCCC
T ss_pred HHHHHcCCCEEEECCcc--CCHHHHHHhC----CCCEEEEecCCHHHHH---HHHhcCCCEEEEcCCccCCCCCC-CCCc
Confidence 34567799999876322 1233444432 2344555566654432 22222 899998641 1 1111 1122
Q ss_pred HHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecccccCCCCHHHHHHHHHHHHHH
Q 010211 350 VPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALR 428 (515)
Q Consensus 350 v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~ 428 (515)
-....+++ ++...+|++.+. ...|. ++..+...|+|++.+.+---..+-|.+.++.+.+.+++
T Consensus 150 ~~~~l~~l---~~~~~~pvia~G--------GI~~~-----nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~~~~~ 212 (215)
T 1xi3_A 150 GLEGLRKI---VESVKIPVVAIG--------GINKD-----NAREVLKTGVDGIAVISAVMGAEDVRKATEELRKIVEE 212 (215)
T ss_dssp HHHHHHHH---HHHCSSCEEEES--------SCCTT-----THHHHHTTTCSEEEESHHHHTSSSHHHHHHHHHHHHHH
T ss_pred CHHHHHHH---HHhCCCCEEEEC--------CcCHH-----HHHHHHHcCCCEEEEhHHHhCCCCHHHHHHHHHHHHhh
Confidence 22233333 233488988753 22233 34456678999999876544455687888887776654
No 82
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=82.82 E-value=19 Score=35.91 Aligned_cols=115 Identities=17% Similarity=0.198 Sum_probs=59.9
Q ss_pred cCCcEEEeccc-------C---CH----HHHHHHHHHHHh----cCCCceEEEEecChhhhhcHHHHHhh-----cCeeE
Q 010211 279 NQVDFYAVSFV-------K---DA----KVVHELKDYLKS----CNADIHVIVKIESADSIPNLHSIISA-----SDGAM 335 (515)
Q Consensus 279 ~gvD~ValSfV-------r---sa----~dv~~vr~~l~~----~~~~i~IIaKIEt~~aveNldeIl~~-----sDgIm 335 (515)
.|+|+|-+.|- + +. +.+..+++...+ .+.+..|++||=.--..+++.++++. +|+|.
T Consensus 164 ~g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~ 243 (336)
T 1f76_A 164 AYAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQVADSLVRHNIDGVI 243 (336)
T ss_dssp GGCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSCCCHHHHHHHHHHHHHTTCSEEE
T ss_pred ccCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCCCCHHHHHHHHHHHHHcCCcEEE
Confidence 48999877652 1 11 233334444321 14578999997422122234343333 79998
Q ss_pred EcCC-----ccc-----ccC----CCCCHHHHHHHHHHHHH-hc--CCcEEEEeccccccccCCCcChHHHhHHHHHHHh
Q 010211 336 VARG-----DLG-----AEL----PIEDVPLLQEDIIRRCR-SM--QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVRE 398 (515)
Q Consensus 336 Igrg-----DLg-----~el----g~e~v~~aqk~Ii~~c~-~a--GKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~ 398 (515)
+.-+ |+. .+. |.+..+ ..-..++..+ .. +.|||... +.-+ ..|+..++..
T Consensus 244 vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~-~~~~~i~~i~~~~~~~ipVi~~G---------GI~~---~~da~~~l~~ 310 (336)
T 1f76_A 244 ATNTTLDRSLVQGMKNCDQTGGLSGRPLQL-KSTEIIRRLSLELNGRLPIIGVG---------GIDS---VIAAREKIAA 310 (336)
T ss_dssp ECCCBCCCTTSTTSTTTTCSSEEEEGGGHH-HHHHHHHHHHHHHTTSSCEEEES---------SCCS---HHHHHHHHHH
T ss_pred EeCCcccccccccccccccCCCcCCchhHH-HHHHHHHHHHHHhCCCCCEEEEC---------CCCC---HHHHHHHHHC
Confidence 7522 210 011 111122 2223333333 33 78988743 3333 3366688889
Q ss_pred CCcEEeec
Q 010211 399 GADAVMLS 406 (515)
Q Consensus 399 G~D~vmLs 406 (515)
|+|+|++.
T Consensus 311 GAd~V~ig 318 (336)
T 1f76_A 311 GASLVQIY 318 (336)
T ss_dssp TCSEEEES
T ss_pred CCCEEEee
Confidence 99999986
No 83
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=82.64 E-value=18 Score=36.76 Aligned_cols=111 Identities=18% Similarity=0.255 Sum_probs=64.2
Q ss_pred HHhhcchhcCCcEEEecccCC-HHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh-cCeeEE-cCCcccccCCC
Q 010211 271 EDIKFGVDNQVDFYAVSFVKD-AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMV-ARGDLGAELPI 347 (515)
Q Consensus 271 ~dI~~al~~gvD~ValSfVrs-a~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDgImI-grgDLg~elg~ 347 (515)
+.++.+.+.|+|+|.+.+-.. .+.++.+++ . .+.++.++-|.+- .....+. +|+|.+ |+. .|-..|.
T Consensus 113 ~~~~~~~~~g~~~V~~~~g~~~~~~i~~~~~----~--g~~v~~~v~t~~~---a~~a~~~GaD~i~v~g~~-~GGh~g~ 182 (369)
T 3bw2_A 113 AKLAVLLDDPVPVVSFHFGVPDREVIARLRR----A--GTLTLVTATTPEE---ARAVEAAGADAVIAQGVE-AGGHQGT 182 (369)
T ss_dssp HHHHHHHHSCCSEEEEESSCCCHHHHHHHHH----T--TCEEEEEESSHHH---HHHHHHTTCSEEEEECTT-CSEECCC
T ss_pred HHHHHHHhcCCCEEEEeCCCCcHHHHHHHHH----C--CCeEEEECCCHHH---HHHHHHcCCCEEEEeCCC-cCCcCCC
Confidence 556677789999998876432 344444433 2 4678888876542 2233333 899999 652 1111111
Q ss_pred -----------CCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeec
Q 010211 348 -----------EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (515)
Q Consensus 348 -----------e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs 406 (515)
.......+++. ...++||+.+. +.-+. .++..++..|+|+|++.
T Consensus 183 ~~~~~~~~~~~~~~~~~l~~i~---~~~~iPViaaG---------GI~~~---~~~~~~l~~GAd~V~vG 237 (369)
T 3bw2_A 183 HRDSSEDDGAGIGLLSLLAQVR---EAVDIPVVAAG---------GIMRG---GQIAAVLAAGADAAQLG 237 (369)
T ss_dssp SSCCGGGTTCCCCHHHHHHHHH---HHCSSCEEEES---------SCCSH---HHHHHHHHTTCSEEEES
T ss_pred cccccccccccccHHHHHHHHH---HhcCceEEEEC---------CCCCH---HHHHHHHHcCCCEEEEC
Confidence 01123333332 23589999853 33232 35567788999999985
No 84
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=82.31 E-value=4.7 Score=42.36 Aligned_cols=153 Identities=19% Similarity=0.240 Sum_probs=97.9
Q ss_pred HHhhcchhcCCcEEEecccCCHHHHHHHH---HHHHhcCCCceEEEEe--cChhhhhcHHHHHhhcCeeEEcCCcccccC
Q 010211 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELK---DYLKSCNADIHVIVKI--ESADSIPNLHSIISASDGAMVARGDLGAEL 345 (515)
Q Consensus 271 ~dI~~al~~gvD~ValSfVrsa~dv~~vr---~~l~~~~~~i~IIaKI--Et~~aveNldeIl~~sDgImIgrgDLg~el 345 (515)
+.|..-.+.|.|.|-++ |.+.++...++ +-|...+-+++++|-| .-.-++..+++.++.+|.+=|-||.++-.
T Consensus 42 ~QI~~L~~aG~eiVRva-Vp~~~~A~al~~I~~~l~~~~~~vPLVADiHF~~~~al~a~~~~a~~~dkiRINPGNig~~- 119 (406)
T 4g9p_A 42 AQVLELHRAGSEIVRLT-VNDEEAAKAVPEIKRRLLAEGVEVPLVGDFHFNGHLLLRKYPKMAEALDKFRINPGTLGRG- 119 (406)
T ss_dssp HHHHHHHHHTCSEEEEE-CCSHHHHHHHHHHHHHHHHTTCCCCEEEECCSSHHHHHHHCHHHHHHCSEEEECTTSSCST-
T ss_pred HHHHHHHHcCCCEEEEe-cCCHHHHHhHHHHHHHHHhcCCCCceEeeecccHHHHHHHHHHHHhHHhhcccCccccCcc-
Confidence 44555557899999887 77877776654 4455667899999977 44567877888888899999999987531
Q ss_pred CCCCHHHHHHHHHHHHHhcCCcEEEEe--ccc-----cccc----cCCCcChH-----H--HhH----HHHHHHhCC--c
Q 010211 346 PIEDVPLLQEDIIRRCRSMQKPVIVAT--NML-----ESMI----DHPTPTRA-----E--VSD----IAIAVREGA--D 401 (515)
Q Consensus 346 g~e~v~~aqk~Ii~~c~~aGKPvivAT--qmL-----eSMi----~~~~PtrA-----E--v~D----vanaV~~G~--D 401 (515)
.+..+-.+.++++|+++|+|+=+-. -=| +.+. ..+.|.-+ | +.- +--+...|. |
T Consensus 120 --~k~~e~~~~vv~~ak~~~~pIRIGVN~GSL~~~ll~k~~d~~~~~~~p~~~~~v~~eamVeSAl~~~~~~~~~~f~~~ 197 (406)
T 4g9p_A 120 --RHKDEHFAEMIRIAMDLGKPVRIGANWGSLDPALLTELMDRNASRPEPKSAHEVVLEALVESAVRAYEAALEMGLGED 197 (406)
T ss_dssp --HHHHHHHHHHHHHHHHHTCCEEEEEEGGGCCHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHHHHHHTCCGG
T ss_pred --ccHHHHHHHHHHHHHHccCCceeccccccccHHHHHHhhcccccCCCccchhhhHHHHHHHHHHHHHHHHHHcCCChh
Confidence 2344566789999999999974433 222 2221 23344211 1 111 111222344 5
Q ss_pred EEeecccccCCCCHHHHHHHHHHHHHHHh
Q 010211 402 AVMLSGETAHGKFPLKAVKVMHTVALRTE 430 (515)
Q Consensus 402 ~vmLs~ETa~G~yPveaV~~m~~I~~~aE 430 (515)
=+++|- +-.-+...|+.-+.++.+.+
T Consensus 198 ~iviS~---KaSdv~~~i~aYr~la~~~d 223 (406)
T 4g9p_A 198 KLVLSA---KVSKARDLVWVYRELARRTQ 223 (406)
T ss_dssp GEEEEE---ECSSHHHHHHHHHHHHHHCC
T ss_pred heEEEe---ecCCHHHHHHHHHHHHHhCC
Confidence 577763 34457778887777776543
No 85
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=82.17 E-value=5.9 Score=38.45 Aligned_cols=37 Identities=14% Similarity=0.425 Sum_probs=27.5
Q ss_pred HHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEee
Q 010211 355 EDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVML 405 (515)
Q Consensus 355 k~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmL 405 (515)
..+++.|+++|.|++--. .+|+ ++..|...|+|.+-+
T Consensus 117 ~~vi~~~~~~gi~~ipGv---------~Tpt-----Ei~~A~~~Gad~vK~ 153 (232)
T 4e38_A 117 PNTVRACQEIGIDIVPGV---------NNPS-----TVEAALEMGLTTLKF 153 (232)
T ss_dssp HHHHHHHHHHTCEEECEE---------CSHH-----HHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHcCCCEEcCC---------CCHH-----HHHHHHHcCCCEEEE
Confidence 578889999999985321 1233 456889999999987
No 86
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=81.79 E-value=13 Score=36.92 Aligned_cols=111 Identities=12% Similarity=0.090 Sum_probs=63.5
Q ss_pred HHhhcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh-cCeeEE-cCCcccccCCCC
Q 010211 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMV-ARGDLGAELPIE 348 (515)
Q Consensus 271 ~dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDgImI-grgDLg~elg~e 348 (515)
+.++.+.+.|+|+|.+++-...+.+ +.+++. .+.++.++-|.+-.. ...+. +|+|.+ |+. -+-..|..
T Consensus 87 ~~~~~~~~~g~d~V~~~~g~p~~~~----~~l~~~--gi~vi~~v~t~~~a~---~~~~~GaD~i~v~g~~-~GG~~G~~ 156 (328)
T 2gjl_A 87 EYRAAIIEAGIRVVETAGNDPGEHI----AEFRRH--GVKVIHKCTAVRHAL---KAERLGVDAVSIDGFE-CAGHPGED 156 (328)
T ss_dssp HHHHHHHHTTCCEEEEEESCCHHHH----HHHHHT--TCEEEEEESSHHHHH---HHHHTTCSEEEEECTT-CSBCCCSS
T ss_pred HHHHHHHhcCCCEEEEcCCCcHHHH----HHHHHc--CCCEEeeCCCHHHHH---HHHHcCCCEEEEECCC-CCcCCCCc
Confidence 4566677889999998875443333 334433 477888887654332 22223 899998 432 12122211
Q ss_pred --CHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeec
Q 010211 349 --DVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (515)
Q Consensus 349 --~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs 406 (515)
.-....+++ ....++|++.+. +.-+. .++..++..|+|++++.
T Consensus 157 ~~~~~~~l~~v---~~~~~iPviaaG---------GI~~~---~~v~~al~~GAdgV~vG 201 (328)
T 2gjl_A 157 DIPGLVLLPAA---ANRLRVPIIASG---------GFADG---RGLVAALALGADAINMG 201 (328)
T ss_dssp CCCHHHHHHHH---HTTCCSCEEEES---------SCCSH---HHHHHHHHHTCSEEEES
T ss_pred cccHHHHHHHH---HHhcCCCEEEEC---------CCCCH---HHHHHHHHcCCCEEEEC
Confidence 112222222 234579999863 33232 25667778899999985
No 87
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=81.70 E-value=12 Score=34.84 Aligned_cols=137 Identities=11% Similarity=0.061 Sum_probs=75.6
Q ss_pred cchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceE-EE-EecChhhhhcHHHHHhhcCeeEEcCCcccccCCCCCHHH
Q 010211 275 FGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHV-IV-KIESADSIPNLHSIISASDGAMVARGDLGAELPIEDVPL 352 (515)
Q Consensus 275 ~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~I-Ia-KIEt~~aveNldeIl~~sDgImIgrgDLg~elg~e~v~~ 352 (515)
.+.+.|+|+|.+..--..+.+..+.+++++.|....+ +. -+ |..-.+.++++ . .+-+...++-++++.|+...+.
T Consensus 75 ~~~~~Gad~itvh~~~g~~~l~~~~~~~~~~g~~~~~~ll~~~-t~~~~~~l~~~-~-~~~~vl~~a~~~~~~G~~g~~~ 151 (216)
T 1q6o_A 75 MCFEANADWVTVICCADINTAKGALDVAKEFNGDVQIELTGYW-TWEQAQQWRDA-G-IGQVVYHRSRDAQAAGVAWGEA 151 (216)
T ss_dssp HHHHTTCSEEEEETTSCHHHHHHHHHHHHHTTCEEEEEECSCC-CHHHHHHHHHT-T-CCEEEEECCHHHHHTTCCCCHH
T ss_pred HHHhCCCCEEEEeccCCHHHHHHHHHHHHHcCCCceeeeeeCC-ChhhHHHHHhc-C-cHHHHHHHHHHHHhcCCCCCHH
Confidence 3457899999886544444477777777776655322 11 11 12233444433 1 3444445555566666543223
Q ss_pred HHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecccccCCCCHHHHHHHHHHHHHH
Q 010211 353 LQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALR 428 (515)
Q Consensus 353 aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~ 428 (515)
-.+.+-+.+ ..+.|+++. -...|..+ ..++..|+|.+....--...+-|.++++.+.+...+
T Consensus 152 ~i~~lr~~~-~~~~~i~v~--------GGI~~~~~-----~~~~~aGad~ivvG~~I~~a~dp~~~~~~~~~~i~~ 213 (216)
T 1q6o_A 152 DITAIKRLS-DMGFKVTVT--------GGLALEDL-----PLFKGIPIHVFIAGRSIRDAASPVEAARQFKRSIAE 213 (216)
T ss_dssp HHHHHHHHH-HTTCEEEEE--------SSCCGGGG-----GGGTTSCCSEEEESHHHHTSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhc-CCCCcEEEE--------CCcChhhH-----HHHHHcCCCEEEEeehhcCCCCHHHHHHHHHHHHHh
Confidence 333443334 234556653 22334332 356788999998764443445699999888776543
No 88
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=81.38 E-value=16 Score=36.09 Aligned_cols=128 Identities=11% Similarity=0.135 Sum_probs=76.0
Q ss_pred HhhcchhcCCcEEEecc-cCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh----cCeeEEcCCcccccCC
Q 010211 272 DIKFGVDNQVDFYAVSF-VKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA----SDGAMVARGDLGAELP 346 (515)
Q Consensus 272 dI~~al~~gvD~ValSf-Vrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~----sDgImIgrgDLg~elg 346 (515)
.+..+...|+|.|.+-- ..+.+++.++.++..+.| +.+++-+- |.+|+..+ +|.|-+..-||.. ++
T Consensus 134 qi~ea~~~GAD~VlLi~a~L~~~~l~~l~~~a~~lG--l~~lvevh------~~eEl~~A~~~ga~iIGinnr~l~t-~~ 204 (272)
T 3tsm_A 134 QVYEARSWGADCILIIMASVDDDLAKELEDTAFALG--MDALIEVH------DEAEMERALKLSSRLLGVNNRNLRS-FE 204 (272)
T ss_dssp HHHHHHHTTCSEEEEETTTSCHHHHHHHHHHHHHTT--CEEEEEEC------SHHHHHHHTTSCCSEEEEECBCTTT-CC
T ss_pred HHHHHHHcCCCEEEEcccccCHHHHHHHHHHHHHcC--CeEEEEeC------CHHHHHHHHhcCCCEEEECCCCCcc-CC
Confidence 45566788999977642 234556666666666554 44444443 44444333 7888887667643 12
Q ss_pred CCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecccccCCCCHHHHHHHHH
Q 010211 347 IEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMH 423 (515)
Q Consensus 347 ~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ETa~G~yPveaV~~m~ 423 (515)
. ++. .-.+++.... .++|++. .++.-|.. |+..+...|+|+++.-.---....|.++++.|.
T Consensus 205 ~-dl~-~~~~L~~~ip-~~~~vIa---------esGI~t~e---dv~~l~~~Ga~gvLVG~almr~~d~~~~~~~l~ 266 (272)
T 3tsm_A 205 V-NLA-VSERLAKMAP-SDRLLVG---------ESGIFTHE---DCLRLEKSGIGTFLIGESLMRQHDVAAATRALL 266 (272)
T ss_dssp B-CTH-HHHHHHHHSC-TTSEEEE---------ESSCCSHH---HHHHHHTTTCCEEEECHHHHTSSCHHHHHHHHH
T ss_pred C-ChH-HHHHHHHhCC-CCCcEEE---------ECCCCCHH---HHHHHHHcCCCEEEEcHHHcCCcCHHHHHHHHH
Confidence 1 221 1222332221 2677776 56666655 455677889999998544446788888887764
No 89
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=80.87 E-value=12 Score=36.86 Aligned_cols=156 Identities=13% Similarity=0.098 Sum_probs=92.2
Q ss_pred CCHhhHHHh-hcchhcCCcEEEecc-cCC-----HHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh-cCeeEE
Q 010211 265 ITDKDWEDI-KFGVDNQVDFYAVSF-VKD-----AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMV 336 (515)
Q Consensus 265 ltekD~~dI-~~al~~gvD~ValSf-Vrs-----a~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDgImI 336 (515)
++.+|+..| +...+.|+|.|=++| +.. -.|..++...+.+. .++.+.+.+.+.+ .++..++. +|.|.|
T Consensus 24 ~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~-~~~~~~~l~~~~~---~i~~a~~ag~~~v~i 99 (298)
T 2cw6_A 24 VSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGDHTEVLKGIQKF-PGINYPVLTPNLK---GFEAAVAAGAKEVVI 99 (298)
T ss_dssp CCHHHHHHHHHHHHHTTCSEECCEECCCTTTCGGGTTHHHHHHHSCCC-TTCBCCEECCSHH---HHHHHHHTTCSEEEE
T ss_pred CCHHHHHHHHHHHHHcCcCEEEECCCcCcccccccCCHHHHHHHHhhC-CCCEEEEEcCCHH---hHHHHHHCCCCEEEE
Confidence 566777554 455568999987754 222 13544555555442 2333333344433 34444444 565544
Q ss_pred --cCCccc----ccCCCCCHHHHHHHHHHHHHhcCCcEEEEecccccccc-CC---CcChHHHhHHH-HHHHhCCcEEee
Q 010211 337 --ARGDLG----AELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMID-HP---TPTRAEVSDIA-IAVREGADAVML 405 (515)
Q Consensus 337 --grgDLg----~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~-~~---~PtrAEv~Dva-naV~~G~D~vmL 405 (515)
+-.|.- .....++.....+++++.++++|++|-+.. +|.. .+ .-+..++.+++ .+...|+|.+.|
T Consensus 100 ~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l----~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l 175 (298)
T 2cw6_A 100 FGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYV----SCALGCPYEGKISPAKVAEVTKKFYSMGCYEISL 175 (298)
T ss_dssp EEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEE----ETTTCBTTTBSCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred EecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEE----EEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEe
Confidence 333321 122346677788889999999999986532 1111 11 22334444544 345679999999
Q ss_pred cccccCCCCHHHHHHHHHHHHHHH
Q 010211 406 SGETAHGKFPLKAVKVMHTVALRT 429 (515)
Q Consensus 406 s~ETa~G~yPveaV~~m~~I~~~a 429 (515)
. +|.=.-.|.+.-+.+..+.++.
T Consensus 176 ~-DT~G~~~P~~~~~lv~~l~~~~ 198 (298)
T 2cw6_A 176 G-DTIGVGTPGIMKDMLSAVMQEV 198 (298)
T ss_dssp E-ETTSCCCHHHHHHHHHHHHHHS
T ss_pred c-CCCCCcCHHHHHHHHHHHHHhC
Confidence 6 7777778999998888887765
No 90
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=80.42 E-value=8.8 Score=37.26 Aligned_cols=141 Identities=16% Similarity=0.083 Sum_probs=86.1
Q ss_pred CCCCHhhHHHh-hcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHH-------hh-cCe
Q 010211 263 PSITDKDWEDI-KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSII-------SA-SDG 333 (515)
Q Consensus 263 p~ltekD~~dI-~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl-------~~-sDg 333 (515)
|.-|..|.+.+ +.+.++|++.|+++ +..+ ..++++.... .+.+.+-|==|.|-.+.+..+ +. +|.
T Consensus 31 p~~t~~~i~~l~~~a~~~~~~aVcv~----p~~v-~a~~~l~~~~-~v~v~tvigFP~G~~~~~~k~~e~~~Av~~GAdE 104 (234)
T 1n7k_A 31 PRATEEDVRNLVREASDYGFRCAVLT----PVYT-VKISGLAEKL-GVKLCSVIGFPLGQAPLEVKLVEAQTVLEAGATE 104 (234)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----HHHH-HHHHHHHHHH-TCCEEEEESTTTCCSCHHHHHHHHHHHHHHTCCE
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEc----hHHh-eeehHhCCCC-CceEEEEeCCCCCCCcHHHHHHHHHHHHHcCCCE
Confidence 66678887544 67888999998764 5556 6677775431 466666663334333333222 22 455
Q ss_pred eEE--cCCcccccCCCCCHHHHHHHHHHHHHhcCCcE--EEEeccccccccCCCcChHHHhHHHH-HHHhCCcEEeeccc
Q 010211 334 AMV--ARGDLGAELPIEDVPLLQEDIIRRCRSMQKPV--IVATNMLESMIDHPTPTRAEVSDIAI-AVREGADAVMLSGE 408 (515)
Q Consensus 334 ImI--grgDLg~elg~e~v~~aqk~Ii~~c~~aGKPv--ivATqmLeSMi~~~~PtrAEv~Dvan-aV~~G~D~vmLs~E 408 (515)
|=+ -.|.|- +.+..-.+.+.++|...|+|+ |+-| . .++..|+...+. +...|+|.|=-|
T Consensus 105 ID~vinig~~~-----~~v~~ei~~v~~a~~~~g~~lKvIlEt-----~----~L~~e~i~~a~ria~eaGADfVKTs-- 168 (234)
T 1n7k_A 105 LDVVPHLSLGP-----EAVYREVSGIVKLAKSYGAVVKVILEA-----P----LWDDKTLSLLVDSSRRAGADIVKTS-- 168 (234)
T ss_dssp EEECCCGGGCH-----HHHHHHHHHHHHHHHHTTCEEEEECCG-----G----GSCHHHHHHHHHHHHHTTCSEEESC--
T ss_pred EEEeccchHHH-----HHHHHHHHHHHHHHhhcCCeEEEEEec-----c----CCCHHHHHHHHHHHHHhCCCEEEeC--
Confidence 422 222221 267777788889999989997 5533 2 335566555443 456799998755
Q ss_pred ccCCCCH-----HHHHHH--HHHHHH
Q 010211 409 TAHGKFP-----LKAVKV--MHTVAL 427 (515)
Q Consensus 409 Ta~G~yP-----veaV~~--m~~I~~ 427 (515)
-|..| ++.|+. |++++.
T Consensus 169 --TG~~~~~gAt~~dv~l~~m~~~v~ 192 (234)
T 1n7k_A 169 --TGVYTKGGDPVTVFRLASLAKPLG 192 (234)
T ss_dssp --CSSSCCCCSHHHHHHHHHHHGGGT
T ss_pred --CCCCCCCCCCHHHHHHHHHHHHHC
Confidence 45554 788999 887654
No 91
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=80.16 E-value=19 Score=33.38 Aligned_cols=132 Identities=11% Similarity=0.033 Sum_probs=72.0
Q ss_pred hcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh-cCeeEEcCCcccccC-CCCCHH
Q 010211 274 KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAEL-PIEDVP 351 (515)
Q Consensus 274 ~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDgImIgrgDLg~el-g~e~v~ 351 (515)
+.+.+.|+|+|-+..- ...+..+++.. . ...+.+-+.|.+-+ .+.... +|.|++++.--+... |.+ +
T Consensus 82 ~~a~~~gad~v~l~~~--~~~~~~~~~~~---~-~~~ig~sv~t~~~~---~~a~~~gaD~i~~~~~f~~~~~~g~~--~ 150 (221)
T 1yad_A 82 DIALFSTIHRVQLPSG--SFSPKQIRARF---P-HLHIGRSVHSLEEA---VQAEKEDADYVLFGHVFETDCKKGLE--G 150 (221)
T ss_dssp HHHHTTTCCEEEECTT--SCCHHHHHHHC---T-TCEEEEEECSHHHH---HHHHHTTCSEEEEECCC------------
T ss_pred HHHHHcCCCEEEeCCC--ccCHHHHHHHC---C-CCEEEEEcCCHHHH---HHHHhCCCCEEEECCccccCCCCCCC--C
Confidence 3456789999987643 22344555543 1 44555555544322 222222 899999874111111 100 1
Q ss_pred HHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecccccCCCCHHHHHHHHHHHHHHH
Q 010211 352 LLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRT 429 (515)
Q Consensus 352 ~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~a 429 (515)
.-.+.+-+.++..++|++.+. +. +.. ++..++..|+|++.+.+---..+-|.++++.+.+.+++.
T Consensus 151 ~~~~~l~~~~~~~~~pvia~G---------GI-~~~---nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~~~~~~ 215 (221)
T 1yad_A 151 RGVSLLSDIKQRISIPVIAIG---------GM-TPD---RLRDVKQAGADGIAVMSGIFSSAEPLEAARRYSRKLKEM 215 (221)
T ss_dssp CHHHHHHHHHHHCCSCEEEES---------SC-CGG---GHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhCCCCEEEEC---------CC-CHH---HHHHHHHcCCCEEEEhHHhhCCCCHHHHHHHHHHHHHHh
Confidence 111223333444589988753 33 433 445667789999998765444456888888887766543
No 92
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=80.12 E-value=53 Score=33.21 Aligned_cols=56 Identities=13% Similarity=0.124 Sum_probs=39.8
Q ss_pred CceEEEEecChhhhhcHHHHHhh--cCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEE
Q 010211 308 DIHVIVKIESADSIPNLHSIISA--SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (515)
Q Consensus 308 ~i~IIaKIEt~~aveNldeIl~~--sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivA 371 (515)
.+.|+ --|+....+.+.++++. +|+|++.++-.|- +. --.++++.|+++|.++.+.
T Consensus 237 ~iPI~-~de~i~~~~~~~~~i~~~~~d~v~ik~~~~GG------it-~~~~i~~~A~~~g~~~~~~ 294 (379)
T 2rdx_A 237 DQPMK-LDECVTGLHMAQRIVADRGAEICCLKISNLGG------LS-KARRTRDFLIDNRMPVVAE 294 (379)
T ss_dssp CSCEE-ECTTCCSHHHHHHHHHHTCCSEEEEETTTTTS------HH-HHHHHHHHHHHTTCCEEEE
T ss_pred CCCEE-EeCCcCCHHHHHHHHHcCCCCEEEEeccccCC------HH-HHHHHHHHHHHcCCeEEEe
Confidence 45554 45777777777888776 8999997655532 22 2356888999999999885
No 93
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=79.66 E-value=26 Score=37.20 Aligned_cols=120 Identities=16% Similarity=0.126 Sum_probs=72.5
Q ss_pred HHHhhcchhcCCcEEEeccc--CCHHHHHHHHHHHHhcCCC-ceEE-EEecChhhhhcHHHHHhh-cCeeEEcCCccc--
Q 010211 270 WEDIKFGVDNQVDFYAVSFV--KDAKVVHELKDYLKSCNAD-IHVI-VKIESADSIPNLHSIISA-SDGAMVARGDLG-- 342 (515)
Q Consensus 270 ~~dI~~al~~gvD~ValSfV--rsa~dv~~vr~~l~~~~~~-i~II-aKIEt~~aveNldeIl~~-sDgImIgrgDLg-- 342 (515)
.+.++...+.|++.+.+-.- .+...+..+ +.+.+...+ +.++ -.|.|.+..+.+. +. +|++.+|-|-=+
T Consensus 244 ~e~~~~l~e~gv~~l~Vd~~~g~~~~~~~~i-~~lk~~~~~~~~Vi~G~V~t~~~a~~l~---~aGad~I~Vg~~~g~~~ 319 (503)
T 1me8_A 244 RERVPALVEAGADVLCIDSSDGFSEWQKITI-GWIREKYGDKVKVGAGNIVDGEGFRYLA---DAGADFIKIGIGGGSIC 319 (503)
T ss_dssp HHHHHHHHHHTCSEEEECCSCCCSHHHHHHH-HHHHHHHGGGSCEEEEEECSHHHHHHHH---HHTCSEEEECSSCSTTC
T ss_pred HHHHHHHHhhhccceEEecccCcccchhhHH-HHHHHhCCCCceEeeccccCHHHHHHHH---HhCCCeEEecccCCcCc
Confidence 34455666789998876221 122212222 334333223 5555 4788877775543 34 899988753211
Q ss_pred -----ccCCCCCHHHHHHHHHHHHHhc------CCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeec
Q 010211 343 -----AELPIEDVPLLQEDIIRRCRSM------QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (515)
Q Consensus 343 -----~elg~e~v~~aqk~Ii~~c~~a------GKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs 406 (515)
...|.+ -..+..++.++|++. +.|+|.+. +.-+ -.|++.|+..|+|++|+.
T Consensus 320 ~~r~~~~~g~p-~~~~l~~v~~~~~~~~~~~~~~ipvia~G---------Gi~~---~~di~kAlalGA~~V~iG 381 (503)
T 1me8_A 320 ITREQKGIGRG-QATAVIDVVAERNKYFEETGIYIPVCSDG---------GIVY---DYHMTLALAMGADFIMLG 381 (503)
T ss_dssp CSTTTTCCCCC-HHHHHHHHHHHHHHHHHHHSEECCEEEES---------CCCS---HHHHHHHHHTTCSEEEES
T ss_pred ccccccCCCCc-hHHHHHHHHHHHHHHhhhcCCCceEEEeC---------CCCC---HHHHHHHHHcCCCEEEEC
Confidence 122344 345667788888877 89998743 4433 357889999999999985
No 94
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=79.61 E-value=20 Score=33.56 Aligned_cols=131 Identities=14% Similarity=0.116 Sum_probs=69.2
Q ss_pred HHHhhcchhcCCcEEEecccCC--H--HHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh-cCee---EEcC--C
Q 010211 270 WEDIKFGVDNQVDFYAVSFVKD--A--KVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGA---MVAR--G 339 (515)
Q Consensus 270 ~~dI~~al~~gvD~ValSfVrs--a--~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDgI---mIgr--g 339 (515)
.+.++.+.+.|+|+|.+..... + ..+.++-+.+.+...+..++..+.|.+-. ....+. +|.| +.|. +
T Consensus 91 ~~~i~~~~~~Gad~V~l~~~~~~~~~~~~~~~~i~~i~~~~~~~~v~~~~~t~~ea---~~a~~~Gad~i~~~v~g~~~~ 167 (234)
T 1yxy_A 91 MTEVDQLAALNIAVIAMDCTKRDRHDGLDIASFIRQVKEKYPNQLLMADISTFDEG---LVAHQAGIDFVGTTLSGYTPY 167 (234)
T ss_dssp HHHHHHHHTTTCSEEEEECCSSCCTTCCCHHHHHHHHHHHCTTCEEEEECSSHHHH---HHHHHTTCSEEECTTTTSSTT
T ss_pred HHHHHHHHHcCCCEEEEcccccCCCCCccHHHHHHHHHHhCCCCeEEEeCCCHHHH---HHHHHcCCCEEeeeccccCCC
Confidence 4556777889999997754321 1 12223333333332356677777765432 222222 7887 3332 2
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecccccCCCCHHHHH
Q 010211 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAV 419 (515)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ETa~G~yPveaV 419 (515)
.... .+ +.+ ...+++ +.. +.|++.. .+.-+.. ++..++..|+|++++.. ++=. |.+++
T Consensus 168 ~~~~-~~-~~~-~~i~~~---~~~-~ipvia~---------GGI~s~~---~~~~~~~~Gad~v~vGs--al~~-p~~~~ 225 (234)
T 1yxy_A 168 SRQE-AG-PDV-ALIEAL---CKA-GIAVIAE---------GKIHSPE---EAKKINDLGVAGIVVGG--AITR-PKEIA 225 (234)
T ss_dssp SCCS-SS-CCH-HHHHHH---HHT-TCCEEEE---------SCCCSHH---HHHHHHTTCCSEEEECH--HHHC-HHHHH
T ss_pred CcCC-CC-CCH-HHHHHH---HhC-CCCEEEE---------CCCCCHH---HHHHHHHCCCCEEEEch--HHhC-hHHHH
Confidence 2111 12 233 222333 233 7998873 3444433 44466777999999863 2212 87777
Q ss_pred HHHHHH
Q 010211 420 KVMHTV 425 (515)
Q Consensus 420 ~~m~~I 425 (515)
+.+.+.
T Consensus 226 ~~l~~~ 231 (234)
T 1yxy_A 226 ERFIEA 231 (234)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 777654
No 95
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=79.54 E-value=28 Score=34.13 Aligned_cols=126 Identities=10% Similarity=-0.014 Sum_probs=67.3
Q ss_pred hhH-HHhhcchhcCCc-EEEeccc-----------CCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh----
Q 010211 268 KDW-EDIKFGVDNQVD-FYAVSFV-----------KDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA---- 330 (515)
Q Consensus 268 kD~-~dI~~al~~gvD-~ValSfV-----------rsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~---- 330 (515)
+|. +.++.+.+.|+| +|-+.|- .+.+.+.++-+.+.+. -++.|++|+=.--..+++.++++.
T Consensus 106 ~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~-~~~Pv~vKi~~~~~~~~~~~~a~~~~~~ 184 (311)
T 1jub_A 106 AENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTF-FTKPLGVKLPPYFDLVHFDIMAEILNQF 184 (311)
T ss_dssp HHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTT-CCSCEEEEECCCCSHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHh-cCCCEEEEECCCCCHHHHHHHHHHHHHc
Confidence 444 444566678999 8888652 2444444443444332 257899998422122344444443
Q ss_pred -cCeeEEcCCc---cccc-------------C----CCCCHHHHHHHHHHHHH-hc--CCcEEEEeccccccccCCCcCh
Q 010211 331 -SDGAMVARGD---LGAE-------------L----PIEDVPLLQEDIIRRCR-SM--QKPVIVATNMLESMIDHPTPTR 386 (515)
Q Consensus 331 -sDgImIgrgD---Lg~e-------------l----g~e~v~~aqk~Ii~~c~-~a--GKPvivATqmLeSMi~~~~Ptr 386 (515)
+|+|.+.-.- +.++ . |....+... +.++..+ .. ..|++.. .+.-+
T Consensus 185 G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~-~~i~~v~~~~~~~ipvi~~---------GGI~~- 253 (311)
T 1jub_A 185 PLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTAL-ANVRAFYTRLKPEIQIIGT---------GGIET- 253 (311)
T ss_dssp CCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHH-HHHHHHHTTSCTTSEEEEE---------SSCCS-
T ss_pred CCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHH-HHHHHHHHhcCCCCCEEEE---------CCCCC-
Confidence 6888764210 0011 0 211223333 3444444 44 6888873 33333
Q ss_pred HHHhHHHHHHHhCCcEEeecc
Q 010211 387 AEVSDIAIAVREGADAVMLSG 407 (515)
Q Consensus 387 AEv~DvanaV~~G~D~vmLs~ 407 (515)
..|+..++..|+|+|++..
T Consensus 254 --~~da~~~l~~GAd~V~vg~ 272 (311)
T 1jub_A 254 --GQDAFEHLLCGATMLQIGT 272 (311)
T ss_dssp --HHHHHHHHHHTCSEEEECH
T ss_pred --HHHHHHHHHcCCCEEEEch
Confidence 2366677889999999863
No 96
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=79.07 E-value=31 Score=36.20 Aligned_cols=122 Identities=18% Similarity=0.195 Sum_probs=73.2
Q ss_pred hhHHHhhcchhcCCcEEEecccC-CHHHH-HHHHHHHHhcCCCceEE-EEecChhhhhcHHHHHhh-cCeeEEcCCc--c
Q 010211 268 KDWEDIKFGVDNQVDFYAVSFVK-DAKVV-HELKDYLKSCNADIHVI-VKIESADSIPNLHSIISA-SDGAMVARGD--L 341 (515)
Q Consensus 268 kD~~dI~~al~~gvD~ValSfVr-sa~dv-~~vr~~l~~~~~~i~II-aKIEt~~aveNldeIl~~-sDgImIgrgD--L 341 (515)
...+.+++..+.|+|.|.+.... ..+.. ..++.+.+.. .++.++ -.+-+.+... ..++. +|+|.+|-|- .
T Consensus 233 ~~~~~a~~l~~~G~d~ivi~~a~g~~~~~~~~i~~l~~~~-p~~pvi~G~v~t~~~a~---~~~~~Gad~I~vg~g~g~~ 308 (491)
T 1zfj_A 233 DTFERAEALFEAGADAIVIDTAHGHSAGVLRKIAEIRAHF-PNRTLIAGNIATAEGAR---ALYDAGVDVVKVGIGPGSI 308 (491)
T ss_dssp THHHHHHHHHHHTCSEEEECCSCTTCHHHHHHHHHHHHHC-SSSCEEEEEECSHHHHH---HHHHTTCSEEEECSSCCTT
T ss_pred hHHHHHHHHHHcCCCeEEEeeecCcchhHHHHHHHHHHHC-CCCcEeCCCccCHHHHH---HHHHcCCCEEEECccCCcc
Confidence 44677888889999999876531 11222 2233322222 234444 3555654443 33334 8999997431 0
Q ss_pred cc-----cCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeec
Q 010211 342 GA-----ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (515)
Q Consensus 342 g~-----elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs 406 (515)
.. ..+.+ ...+.+++...+...+.|+|.. .+.-+ ..|++.++..|+|++++.
T Consensus 309 ~~tr~~~~~~~p-~~~~l~~~~~~~~~~~ipvia~---------GGi~~---~~di~kal~~GA~~v~vG 365 (491)
T 1zfj_A 309 CTTRVVAGVGVP-QVTAIYDAAAVAREYGKTIIAD---------GGIKY---SGDIVKALAAGGNAVMLG 365 (491)
T ss_dssp BCHHHHTCCCCC-HHHHHHHHHHHHHHTTCEEEEE---------SCCCS---HHHHHHHHHTTCSEEEES
T ss_pred eEEeeecCCCCC-cHHHHHHHHHHHhhcCCCEEee---------CCCCC---HHHHHHHHHcCCcceeeC
Confidence 00 11223 4556678888888899999874 34333 347888999999999983
No 97
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=79.06 E-value=23 Score=35.60 Aligned_cols=123 Identities=16% Similarity=0.259 Sum_probs=64.9
Q ss_pred HhhHHHhhcchhcC--CcEEEecccC-CHHHHHHHHHHHHhcCCCceEEEE-ecChhhhhcHHHHHhh-cCeeEEc--CC
Q 010211 267 DKDWEDIKFGVDNQ--VDFYAVSFVK-DAKVVHELKDYLKSCNADIHVIVK-IESADSIPNLHSIISA-SDGAMVA--RG 339 (515)
Q Consensus 267 ekD~~dI~~al~~g--vD~ValSfVr-sa~dv~~vr~~l~~~~~~i~IIaK-IEt~~aveNldeIl~~-sDgImIg--rg 339 (515)
+++.+.++...+.| +|++.+.... ......+.-+.+.+.-..+.++.. |-+. +......+. +|+|.++ .|
T Consensus 105 ~~~~~~a~~~~~~g~~~~~i~i~~~~G~~~~~~~~i~~lr~~~~~~~vi~G~v~s~---e~A~~a~~aGad~Ivvs~hgG 181 (336)
T 1ypf_A 105 EDEYEFVQQLAAEHLTPEYITIDIAHGHSNAVINMIQHIKKHLPESFVIAGNVGTP---EAVRELENAGADATKVGIGPG 181 (336)
T ss_dssp HHHHHHHHHHHHTTCCCSEEEEECSSCCSHHHHHHHHHHHHHCTTSEEEEEEECSH---HHHHHHHHHTCSEEEECSSCS
T ss_pred HHHHHHHHHHHhcCCCCCEEEEECCCCCcHHHHHHHHHHHHhCCCCEEEECCcCCH---HHHHHHHHcCCCEEEEecCCC
Confidence 45566667777888 8987654311 122222222223222233556654 5443 344444455 8999993 11
Q ss_pred c-c-c---ccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeec
Q 010211 340 D-L-G---AELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (515)
Q Consensus 340 D-L-g---~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs 406 (515)
= + + ...+.+.+ ....+.+.+++.++|||.+. +.-+ -.|+..++..|+|+||+.
T Consensus 182 ~~~~~~~~~~~g~~g~--~~~~l~~v~~~~~ipVIa~G---------GI~~---g~Dv~kalalGAdaV~iG 239 (336)
T 1ypf_A 182 KVCITKIKTGFGTGGW--QLAALRWCAKAASKPIIADG---------GIRT---NGDVAKSIRFGATMVMIG 239 (336)
T ss_dssp TTCHHHHHHSCSSTTC--HHHHHHHHHHTCSSCEEEES---------CCCS---THHHHHHHHTTCSEEEES
T ss_pred ceeecccccCcCCchh--HHHHHHHHHHHcCCcEEEeC---------CCCC---HHHHHHHHHcCCCEEEeC
Confidence 0 0 0 01111110 12334444555689999843 3333 347889999999999985
No 98
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=78.58 E-value=18 Score=37.57 Aligned_cols=111 Identities=14% Similarity=0.146 Sum_probs=76.7
Q ss_pred HHhhcchhcCCcEEEecccC-----------CHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhhcCeeEEcCC
Q 010211 271 EDIKFGVDNQVDFYAVSFVK-----------DAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARG 339 (515)
Q Consensus 271 ~dI~~al~~gvD~ValSfVr-----------sa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDgImIgrg 339 (515)
+.++.+.+.|+|+|-...-. ..+....++++.++. .+.+++-+-.++.++-+ .+.+|.+-||.+
T Consensus 160 ~~a~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~~--Gl~~~te~~d~~~~~~l---~~~vd~lkIgs~ 234 (385)
T 3nvt_A 160 AVAESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEY--GLGVISEIVTPADIEVA---LDYVDVIQIGAR 234 (385)
T ss_dssp HHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHH--TCEEEEECCSGGGHHHH---TTTCSEEEECGG
T ss_pred HHHHHHHHcCCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHHc--CCEEEEecCCHHHHHHH---HhhCCEEEECcc
Confidence 44456667899988543211 246666777777654 47788888777776554 455999999977
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCC-cChHHHhHHHHHHHh-CCcEEeec
Q 010211 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPT-PTRAEVSDIAIAVRE-GADAVMLS 406 (515)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~-PtrAEv~DvanaV~~-G~D~vmLs 406 (515)
++.- ..+++++.+.||||++.| +. .|-.|+...+..+.. |.+-++|.
T Consensus 235 ~~~n-----------~~LL~~~a~~gkPVilk~---------G~~~t~~e~~~Ave~i~~~Gn~~i~L~ 283 (385)
T 3nvt_A 235 NMQN-----------FELLKAAGRVDKPILLKR---------GLSATIEEFIGAAEYIMSQGNGKIILC 283 (385)
T ss_dssp GTTC-----------HHHHHHHHTSSSCEEEEC---------CTTCCHHHHHHHHHHHHTTTCCCEEEE
T ss_pred cccC-----------HHHHHHHHccCCcEEEec---------CCCCCHHHHHHHHHHHHHcCCCeEEEE
Confidence 7633 156677788999999954 55 788898888888864 66545553
No 99
>1at0_A 17-hedgehog; developmental signaling molecule, cholesterol transfer, signaling protein; 1.90A {Drosophila melanogaster} SCOP: b.86.1.1
Probab=78.54 E-value=5.8 Score=35.37 Aligned_cols=62 Identities=19% Similarity=0.135 Sum_probs=37.3
Q ss_pred EEEecCCEEEEEeecCCCCcceEEeccc-------ccccccCcCCEEEEeCC----eeEEEEEEEe---CCeEEEEEeeC
Q 010211 179 IILKEGQEFNFTIKRGVSTEDTVSVNYD-------DFVNDVEVGDILLVDGG----MMSLAVKSKT---KDLVKCIVVDG 244 (515)
Q Consensus 179 i~L~~G~~v~lt~~~~~~~~~~i~v~~~-------~l~~~v~~Gd~IliDDG----~I~l~V~~~~---~~~v~~~V~~g 244 (515)
++.+.|..+++|.+ ..|++... -+..+|++||.|++.|| ...-+|.++. ...++|=....
T Consensus 58 I~t~~g~~L~lTp~------H~i~v~~~~~~~~~~v~A~~l~~GD~v~~~~~~~~~~~~~~V~~v~~~~~~G~yaPlT~~ 131 (145)
T 1at0_A 58 LHTDGGAVLTVTPA------HLVSVWQPESQKLTFVFADRIEEKNQVLVRDVETGELRPQRVVKVGSVRSKGVVAPLTRE 131 (145)
T ss_dssp EEETTSCEEEECTT------CEEEEEETTTTEEEEEEGGGCCTTCEEEEECTTTCCEEEEEEEEEEEEEEEEEEEEEESS
T ss_pred EEECCCCEEEEeCC------CEEEEecCCCCcEEEEEHHHCcCCCEEEEecCCCCCEEEEEEEEEEEEEEeeeEccccCc
Confidence 44556777777654 33444322 26689999999999987 3344455543 44566644444
Q ss_pred cE
Q 010211 245 GE 246 (515)
Q Consensus 245 G~ 246 (515)
|.
T Consensus 132 Gt 133 (145)
T 1at0_A 132 GT 133 (145)
T ss_dssp SE
T ss_pred EE
Confidence 43
No 100
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=78.29 E-value=17 Score=37.39 Aligned_cols=93 Identities=17% Similarity=0.267 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh-cCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEE
Q 010211 293 KVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (515)
Q Consensus 293 ~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivA 371 (515)
++...+++|.++. .+.+++-+=..++ +|.+.+. +|.+=||-+|+. .++ +++.+.+.||||++.
T Consensus 78 e~~~~L~~~~~~~--Gi~~~st~fD~~s---vd~l~~~~v~~~KI~S~~~~------N~p-----LL~~va~~gKPviLs 141 (350)
T 3g8r_A 78 EQMQKLVAEMKAN--GFKAICTPFDEES---VDLIEAHGIEIIKIASCSFT------DWP-----LLERIARSDKPVVAS 141 (350)
T ss_dssp HHHHHHHHHHHHT--TCEEEEEECSHHH---HHHHHHTTCCEEEECSSSTT------CHH-----HHHHHHTSCSCEEEE
T ss_pred HHHHHHHHHHHHc--CCcEEeccCCHHH---HHHHHHcCCCEEEECccccc------CHH-----HHHHHHhhCCcEEEE
Confidence 3445555555443 2444443333333 3444445 788888877762 222 345556788888886
Q ss_pred eccccccccCCCcChHHHhHHHHHHHh-CCcEEeeccccc
Q 010211 372 TNMLESMIDHPTPTRAEVSDIAIAVRE-GADAVMLSGETA 410 (515)
Q Consensus 372 TqmLeSMi~~~~PtrAEv~DvanaV~~-G~D~vmLs~ETa 410 (515)
| +.-|-.|+...++++.. |.+.++|--++.
T Consensus 142 t---------Gmstl~Ei~~Ave~i~~~g~~viLlhC~s~ 172 (350)
T 3g8r_A 142 T---------AGARREDIDKVVSFMLHRGKDLTIMHCVAE 172 (350)
T ss_dssp C---------TTCCHHHHHHHHHHHHTTTCCEEEEECCCC
T ss_pred C---------CCCCHHHHHHHHHHHHHcCCCEEEEecCCC
Confidence 6 33477888887777764 667666655543
No 101
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=78.07 E-value=6.3 Score=37.85 Aligned_cols=147 Identities=15% Similarity=0.111 Sum_probs=85.5
Q ss_pred CCCCHhhHHHh-hcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh--------cCe
Q 010211 263 PSITDKDWEDI-KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA--------SDG 333 (515)
Q Consensus 263 p~ltekD~~dI-~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~--------sDg 333 (515)
|..|..|.+.+ +.+.++|++.|+++ +..+...++++. +.++.+.+-|=-|.|-.+.+..+.. +|.
T Consensus 14 p~~t~~~i~~l~~~a~~~~~~aVcv~----p~~v~~~~~~l~--~~~v~v~~vigFP~G~~~~~~k~~e~~~Ai~~GAde 87 (220)
T 1ub3_A 14 PTATLEEVAKAAEEALEYGFYGLCIP----PSYVAWVRARYP--HAPFRLVTVVGFPLGYQEKEVKALEAALACARGADE 87 (220)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEECC----GGGHHHHHHHCT--TCSSEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSE
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEC----HHHHHHHHHHhC--CCCceEEEEecCCCCCCchHHHHHHHHHHHHcCCCE
Confidence 66688887554 67888999988764 445666666664 4457787778666665544433322 444
Q ss_pred eEEc--CCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHH-HHHhCCcEEeecc-cc
Q 010211 334 AMVA--RGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAI-AVREGADAVMLSG-ET 409 (515)
Q Consensus 334 ImIg--rgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~Dvan-aV~~G~D~vmLs~-ET 409 (515)
|=+- .|.|- +=.++.+..-.+.+.++|...+.|||+-| ..++..|+...+. +...|+|.|=-|. =+
T Consensus 88 vd~vinig~~~-~g~~~~v~~ei~~v~~a~~~~~lkvIlet---------~~l~~e~i~~a~~ia~eaGADfVKTsTGf~ 157 (220)
T 1ub3_A 88 VDMVLHLGRAK-AGDLDYLEAEVRAVREAVPQAVLKVILET---------GYFSPEEIARLAEAAIRGGADFLKTSTGFG 157 (220)
T ss_dssp EEEECCHHHHH-TTCHHHHHHHHHHHHHHSTTSEEEEECCG---------GGSCHHHHHHHHHHHHHHTCSEEECCCSSS
T ss_pred EEecccchhhh-CCCHHHHHHHHHHHHHHHcCCCceEEEec---------CCCCHHHHHHHHHHHHHhCCCEEEeCCCCC
Confidence 4221 11110 00113455556666667765566777644 3346666555443 4567999987652 11
Q ss_pred cCCCCHHHHHHHHHHHH
Q 010211 410 AHGKFPLKAVKVMHTVA 426 (515)
Q Consensus 410 a~G~yPveaV~~m~~I~ 426 (515)
.-|. -++.|+.|.+.+
T Consensus 158 ~~ga-t~~dv~~m~~~v 173 (220)
T 1ub3_A 158 PRGA-SLEDVALLVRVA 173 (220)
T ss_dssp SCCC-CHHHHHHHHHHH
T ss_pred CCCC-CHHHHHHHHHhh
Confidence 1222 358999998774
No 102
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=77.87 E-value=5.2 Score=38.68 Aligned_cols=147 Identities=12% Similarity=0.009 Sum_probs=87.1
Q ss_pred CCCCHhhHHHh-hcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHH------Hhh-cCee
Q 010211 263 PSITDKDWEDI-KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSI------ISA-SDGA 334 (515)
Q Consensus 263 p~ltekD~~dI-~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeI------l~~-sDgI 334 (515)
|..|.+|.+.+ +.+.++|++.|+++ +..+...+++++ + +.+.+-|==|.|-.+.+.. ++. +|.|
T Consensus 12 p~~t~~~i~~l~~~A~~~~~~aVcv~----p~~v~~a~~~l~--g--v~v~tvigFP~G~~~~~~k~~E~~~i~~GAdEI 83 (226)
T 1vcv_A 12 PYLTVDEAVAGARKAEELGVAAYCVN----PIYAPVVRPLLR--K--VKLCVVADFPFGALPTASRIALVSRLAEVADEI 83 (226)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHHHHGGGCS--S--SEEEEEESTTTCCSCHHHHHHHHHHHTTTCSEE
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEC----HHHHHHHHHHhC--C--CeEEEEeCCCCCCCchHHHHHHHHHHHCCCCEE
Confidence 66688887555 77888999998875 344555666663 2 7777666444443333322 222 3433
Q ss_pred EEcCCcccccCC------CCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHH-HHHhCCcEEeecc
Q 010211 335 MVARGDLGAELP------IEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAI-AVREGADAVMLSG 407 (515)
Q Consensus 335 mIgrgDLg~elg------~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~Dvan-aV~~G~D~vmLs~ 407 (515)
= .-+.+| ++.+..-.+.+.++|...+.+||+.|- .++..|+...+. ++..|+|.|=-|.
T Consensus 84 D-----~Vinig~~~~g~~~~v~~ei~~v~~a~~~~~lKvIlEt~---------~Lt~eei~~a~~ia~eaGADfVKTST 149 (226)
T 1vcv_A 84 D-----VVAPIGLVKSRRWAEVRRDLISVVGAAGGRVVKVITEEP---------YLRDEERYTLYDIIAEAGAHFIKSST 149 (226)
T ss_dssp E-----EECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGG---------GCCHHHHHHHHHHHHHHTCSEEECCC
T ss_pred E-----EecchhhhcCCCHHHHHHHHHHHHHHHcCCCceEEEecc---------CCCHHHHHHHHHHHHHcCCCEEEeCC
Confidence 1 112222 244566666777777666677888553 335666555433 4567999987652
Q ss_pred ccc----------CCCCHHHHHHHHHHHHHHHhc
Q 010211 408 ETA----------HGKFPLKAVKVMHTVALRTES 431 (515)
Q Consensus 408 ETa----------~G~yPveaV~~m~~I~~~aE~ 431 (515)
-=. -|.--++.|+.|++.++++-.
T Consensus 150 Gf~~~~~~~~~~~~~gAt~~dv~lm~~~i~~~g~ 183 (226)
T 1vcv_A 150 GFAEEAYAARQGNPVHSTPERAAAIARYIKEKGY 183 (226)
T ss_dssp SCCCHHHHHHTTCCSSCCHHHHHHHHHHHHHHTC
T ss_pred CCCccccccccCCCCCCCHHHHHHHHHHHHHhCC
Confidence 111 122236899999998877653
No 103
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=77.56 E-value=22 Score=32.74 Aligned_cols=125 Identities=6% Similarity=0.006 Sum_probs=69.0
Q ss_pred HHhhcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh----cCeeEEcCCcccccCC
Q 010211 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA----SDGAMVARGDLGAELP 346 (515)
Q Consensus 271 ~dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~----sDgImIgrgDLg~elg 346 (515)
++++.+++.|+|+|.++. ...+ +.+..++.+.. ++.-+.| .+|+... +|.|.+-+++ ..|
T Consensus 71 ~~i~~a~~~Gad~V~~~~-~~~~----~~~~~~~~g~~--~~~g~~t------~~e~~~a~~~G~d~v~v~~t~---~~g 134 (212)
T 2v82_A 71 EQVDALARMGCQLIVTPN-IHSE----VIRRAVGYGMT--VCPGCAT------ATEAFTALEAGAQALKIFPSS---AFG 134 (212)
T ss_dssp HHHHHHHHTTCCEEECSS-CCHH----HHHHHHHTTCE--EECEECS------HHHHHHHHHTTCSEEEETTHH---HHC
T ss_pred HHHHHHHHcCCCEEEeCC-CCHH----HHHHHHHcCCC--EEeecCC------HHHHHHHHHCCCCEEEEecCC---CCC
Confidence 367777889999997553 2222 22344444433 3333444 3343332 7999885543 123
Q ss_pred CCCHHHHHHHHHHHHHhc--CCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecccccCC----CCHHHHHH
Q 010211 347 IEDVPLLQEDIIRRCRSM--QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHG----KFPLKAVK 420 (515)
Q Consensus 347 ~e~v~~aqk~Ii~~c~~a--GKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ETa~G----~yPveaV~ 420 (515)
+ ...+++ ++.. +.|++... +. +. .++..+...|+|++.+.+--..+ .-|.++++
T Consensus 135 ~----~~~~~l---~~~~~~~ipvia~G---------GI-~~---~~i~~~~~~Ga~gv~vGsai~~~~~~~~d~~~~~~ 194 (212)
T 2v82_A 135 P----QYIKAL---KAVLPSDIAVFAVG---------GV-TP---ENLAQWIDAGCAGAGLGSDLYRAGQSVERTAQQAA 194 (212)
T ss_dssp H----HHHHHH---HTTSCTTCEEEEES---------SC-CT---TTHHHHHHHTCSEEEECTTTCCTTCCHHHHHHHHH
T ss_pred H----HHHHHH---HHhccCCCeEEEeC---------CC-CH---HHHHHHHHcCCCEEEEChHHhCCCCCHHHHHHHHH
Confidence 2 222222 3333 37877642 22 21 24556677899999975432222 35788888
Q ss_pred HHHHHHHHHhc
Q 010211 421 VMHTVALRTES 431 (515)
Q Consensus 421 ~m~~I~~~aE~ 431 (515)
.+.+++.++-+
T Consensus 195 ~l~~~~~~~~~ 205 (212)
T 2v82_A 195 AFVKAYREAVQ 205 (212)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88887776654
No 104
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=77.50 E-value=51 Score=31.45 Aligned_cols=135 Identities=13% Similarity=0.098 Sum_probs=75.4
Q ss_pred HHhhcchhcCCcEE--Eecc-cCCHH----HHHHHHHHHHhcCCCceEEEEecChhh--------hhcHHHHHhh-----
Q 010211 271 EDIKFGVDNQVDFY--AVSF-VKDAK----VVHELKDYLKSCNADIHVIVKIESADS--------IPNLHSIISA----- 330 (515)
Q Consensus 271 ~dI~~al~~gvD~V--alSf-Vrsa~----dv~~vr~~l~~~~~~i~IIaKIEt~~a--------veNldeIl~~----- 330 (515)
+.++.+++.|+|.| -+.. ..+.+ ++.++.+...+.+ +.+++.+- +.| .+++++.+..
T Consensus 103 ~~v~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~g--~~viv~~~-~~G~~l~~~~~~~~~~~~a~~a~~~G 179 (273)
T 2qjg_A 103 TTVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWG--MPLIAMMY-PRGKHIQNERDPELVAHAARLGAELG 179 (273)
T ss_dssp SCHHHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHHT--CCEEEEEE-ECSTTCSCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHcC--CCEEEEeC-CCCcccCCCCCHhHHHHHHHHHHHcC
Confidence 44566778899998 3321 11111 2344455554443 44555440 111 1344443222
Q ss_pred cCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCc-ChHH-HhHHHHHHHhCCcEEeeccc
Q 010211 331 SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTP-TRAE-VSDIAIAVREGADAVMLSGE 408 (515)
Q Consensus 331 sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~P-trAE-v~DvanaV~~G~D~vmLs~E 408 (515)
+|.|.++.. .+ + ...+++ +...+.|++... ...+ +..+ ...+..++..|+|+++....
T Consensus 180 ad~i~~~~~-----~~---~-~~l~~i---~~~~~ipvva~G--------Gi~~~~~~~~~~~~~~~~~~Ga~gv~vg~~ 239 (273)
T 2qjg_A 180 ADIVKTSYT-----GD---I-DSFRDV---VKGCPAPVVVAG--------GPKTNTDEEFLQMIKDAMEAGAAGVAVGRN 239 (273)
T ss_dssp CSEEEECCC-----SS---H-HHHHHH---HHHCSSCEEEEC--------CSCCSSHHHHHHHHHHHHHHTCSEEECCHH
T ss_pred CCEEEECCC-----CC---H-HHHHHH---HHhCCCCEEEEe--------CCCCCCHHHHHHHHHHHHHcCCcEEEeeHH
Confidence 798888741 22 1 222333 344579988742 2222 2333 22366777899999998766
Q ss_pred ccCCCCHHHHHHHHHHHHHH
Q 010211 409 TAHGKFPLKAVKVMHTVALR 428 (515)
Q Consensus 409 Ta~G~yPveaV~~m~~I~~~ 428 (515)
--....|.++++.+.++..+
T Consensus 240 i~~~~~~~~~~~~l~~~~~~ 259 (273)
T 2qjg_A 240 IFQHDDVVGITRAVCKIVHE 259 (273)
T ss_dssp HHTSSSHHHHHHHHHHHHHH
T ss_pred hhCCCCHHHHHHHHHHHHhc
Confidence 66677899999888887764
No 105
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=76.07 E-value=14 Score=36.02 Aligned_cols=149 Identities=14% Similarity=0.100 Sum_probs=84.2
Q ss_pred CCCCHhhHHHh-hcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh-cCeeEEcCCc
Q 010211 263 PSITDKDWEDI-KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGD 340 (515)
Q Consensus 263 p~ltekD~~dI-~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDgImIgrgD 340 (515)
|..|..|.+.+ +.+.++|++.|+++ +..+..++++|+ +..+.|.+=|==|.|-...+.-+.. -+++--|--.
T Consensus 38 p~~t~~~i~~lc~eA~~~~~~aVcV~----p~~v~~a~~~L~--~s~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdE 111 (239)
T 3ngj_A 38 ADATEEQIRKLCSEAAEYKFASVCVN----PTWVPLCAELLK--GTGVKVCTVIGFPLGATPSEVKAYETKVAVEQGAEE 111 (239)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHHHHHHHHT--TSSCEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSE
T ss_pred CCCCHHHHHHHHHHHHhcCCcEEEEC----HHHHHHHHHHhC--CCCCeEEEEeccCCCCCchHHHHHHHHHHHHcCCCE
Confidence 56688887555 67888999988874 556777888884 4557777667555554444333221 1111112221
Q ss_pred cc--ccCCC------CCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHH-HHhCCcEEeecccccC
Q 010211 341 LG--AELPI------EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIA-VREGADAVMLSGETAH 411 (515)
Q Consensus 341 Lg--~elg~------e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~Dvana-V~~G~D~vmLs~ETa~ 411 (515)
+- +.+|. +.+..-.+.+.++|...-.+||+-| ..-+..|+...... ...|+|.|=-|.-=..
T Consensus 112 IDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt---------~~Lt~eei~~a~~ia~~aGADfVKTSTGf~~ 182 (239)
T 3ngj_A 112 VDMVINIGMVKAKKYDDVEKDVKAVVDASGKALTKVIIEC---------CYLTNEEKVEVCKRCVAAGAEYVKTSTGFGT 182 (239)
T ss_dssp EEEECCHHHHHTTCHHHHHHHHHHHHHHHTTSEEEEECCG---------GGSCHHHHHHHHHHHHHHTCSEEECCCSSSS
T ss_pred EEEEeehHHhccccHHHHHHHHHHHHHHhcCCceEEEEec---------CCCCHHHHHHHHHHHHHHCcCEEECCCCCCC
Confidence 21 22221 2355555666666653323445433 23366675555443 5679999887622112
Q ss_pred CCCHHHHHHHHHHHH
Q 010211 412 GKFPLKAVKVMHTVA 426 (515)
Q Consensus 412 G~yPveaV~~m~~I~ 426 (515)
|---++.|+.|++.+
T Consensus 183 ggAt~~dv~lmr~~v 197 (239)
T 3ngj_A 183 HGATPEDVKLMKDTV 197 (239)
T ss_dssp CCCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHhh
Confidence 223458999999876
No 106
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=75.86 E-value=48 Score=34.05 Aligned_cols=159 Identities=12% Similarity=0.119 Sum_probs=99.7
Q ss_pred CCCHhhHHHhhcc-hhcCCcEEEe-cccCCHHHHHHHHHHHHhcCCCceEEEEec-ChhhhhcH-HHHHhh-cC--eeEE
Q 010211 264 SITDKDWEDIKFG-VDNQVDFYAV-SFVKDAKVVHELKDYLKSCNADIHVIVKIE-SADSIPNL-HSIISA-SD--GAMV 336 (515)
Q Consensus 264 ~ltekD~~dI~~a-l~~gvD~Val-SfVrsa~dv~~vr~~l~~~~~~i~IIaKIE-t~~aveNl-deIl~~-sD--gImI 336 (515)
.++..|+-.|... .+.|+|.|=+ +|+-++.|...++...+. ..+..+.+-.= +..+++.. +.+... .| .+|+
T Consensus 30 ~~~~~~Kl~ia~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~-~~~~~i~~l~r~~~~di~~a~~al~~ag~~~v~if~ 108 (370)
T 3rmj_A 30 AMTKEEKIRVARQLEKLGVDIIEAGFAAASPGDFEAVNAIAKT-ITKSTVCSLSRAIERDIRQAGEAVAPAPKKRIHTFI 108 (370)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEEEEGGGCHHHHHHHHHHHTT-CSSSEEEEEEESSHHHHHHHHHHHTTSSSEEEEEEE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHHh-CCCCeEEEEecCCHHHHHHHHHHHhhCCCCEEEEEe
Confidence 4677888666444 4579998866 456678888888876643 34555444331 34444322 111112 23 3577
Q ss_pred cCCcccc----cCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHH-HHHhCCcEEeecccccC
Q 010211 337 ARGDLGA----ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAI-AVREGADAVMLSGETAH 411 (515)
Q Consensus 337 grgDLg~----elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~Dvan-aV~~G~D~vmLs~ETa~ 411 (515)
+-.|+-. .+..+++.+...++++.|+++|..|.+... ....-+...+.+++. +...|+|.+.|. +|.=
T Consensus 109 ~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~~~~e------d~~r~~~~~~~~~~~~~~~~Ga~~i~l~-DT~G 181 (370)
T 3rmj_A 109 ATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDVEFSCE------DALRSEIDFLAEICGAVIEAGATTINIP-DTVG 181 (370)
T ss_dssp ECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTTCSCEEEEEE------TGGGSCHHHHHHHHHHHHHHTCCEEEEE-CSSS
T ss_pred cCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCEEEEecC------CCCccCHHHHHHHHHHHHHcCCCEEEec-CccC
Confidence 7667643 233467777888899999999998876431 111222222444443 567899999985 8988
Q ss_pred CCCHHHHHHHHHHHHHHHh
Q 010211 412 GKFPLKAVKVMHTVALRTE 430 (515)
Q Consensus 412 G~yPveaV~~m~~I~~~aE 430 (515)
.-.|-+.-+.+..+..+.-
T Consensus 182 ~~~P~~~~~lv~~l~~~~~ 200 (370)
T 3rmj_A 182 YSIPYKTEEFFRELIAKTP 200 (370)
T ss_dssp CCCHHHHHHHHHHHHHHST
T ss_pred CcCHHHHHHHHHHHHHhCC
Confidence 8899998888888877653
No 107
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=75.49 E-value=11 Score=34.52 Aligned_cols=106 Identities=15% Similarity=0.185 Sum_probs=61.9
Q ss_pred HhhHHHh-hcchhcCCcEEEecccC-CH-HHHHHHHHHHHhcCCCceEEE-EecChhhhhcHHHHHhh-cCeeEEcCCcc
Q 010211 267 DKDWEDI-KFGVDNQVDFYAVSFVK-DA-KVVHELKDYLKSCNADIHVIV-KIESADSIPNLHSIISA-SDGAMVARGDL 341 (515)
Q Consensus 267 ekD~~dI-~~al~~gvD~ValSfVr-sa-~dv~~vr~~l~~~~~~i~IIa-KIEt~~aveNldeIl~~-sDgImIgrgDL 341 (515)
..+...+ +...+.|+++|.+.+-. .+ +.+..+|+.+. .+..+-+ .+.|++ .+++-.+. +|.| ++++-
T Consensus 21 ~~~~~~~~~~~~~~G~~~iev~~~~~~~~~~i~~ir~~~~---~~~~ig~~~v~~~~---~~~~a~~~Gad~i-v~~~~- 92 (205)
T 1wa3_A 21 VEEAKEKALAVFEGGVHLIEITFTVPDADTVIKELSFLKE---KGAIIGAGTVTSVE---QCRKAVESGAEFI-VSPHL- 92 (205)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHTHHHHH---TTCEEEEESCCSHH---HHHHHHHHTCSEE-ECSSC-
T ss_pred HHHHHHHHHHHHHCCCCEEEEeCCChhHHHHHHHHHHHCC---CCcEEEecccCCHH---HHHHHHHcCCCEE-EcCCC-
Confidence 3444333 44557799999775422 11 22455555542 2333333 344443 23333334 8999 77662
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeec
Q 010211 342 GAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (515)
Q Consensus 342 g~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs 406 (515)
+ ..+++.|++.|+|++.-. .|.. ++..++..|+|.+-+.
T Consensus 93 ------~------~~~~~~~~~~g~~vi~g~-----------~t~~---e~~~a~~~Gad~vk~~ 131 (205)
T 1wa3_A 93 ------D------EEISQFCKEKGVFYMPGV-----------MTPT---ELVKAMKLGHTILKLF 131 (205)
T ss_dssp ------C------HHHHHHHHHHTCEEECEE-----------CSHH---HHHHHHHTTCCEEEET
T ss_pred ------C------HHHHHHHHHcCCcEECCc-----------CCHH---HHHHHHHcCCCEEEEc
Confidence 1 468889999999998621 2322 3557899999998764
No 108
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=75.26 E-value=13 Score=36.65 Aligned_cols=149 Identities=15% Similarity=0.123 Sum_probs=86.2
Q ss_pred CCCCHhhHHHh-hcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh-cCeeEEcCCc
Q 010211 263 PSITDKDWEDI-KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGD 340 (515)
Q Consensus 263 p~ltekD~~dI-~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDgImIgrgD 340 (515)
|..|..|.+.+ +.+.++|++.|+++ +..+..+++.|+ +..+.|.+=|=-|.|-...+.-+.. -+++--|--.
T Consensus 54 p~~t~~~I~~lc~eA~~~~~aaVCV~----p~~V~~a~~~L~--gs~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdE 127 (260)
T 3r12_A 54 PFATPDDIKKLCLEARENRFHGVCVN----PCYVKLAREELE--GTDVKVVTVVGFPLGANETRTKAHEAIFAVESGADE 127 (260)
T ss_dssp TTCCHHHHHHHHHHHHHTTCSEEEEC----GGGHHHHHHHHT--TSCCEEEEEESTTTCCSCHHHHHHHHHHHHHHTCSE
T ss_pred CCCCHHHHHHHHHHHHhcCCcEEEEC----HHHHHHHHHHhc--CCCCeEEEEecCCCCCCcHHHHHHHHHHHHHcCCCE
Confidence 56688887555 67888999998874 556777888884 4567777777667666554443332 1222222222
Q ss_pred cc--ccCCC------CCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHH-HHHhCCcEEeecccccC
Q 010211 341 LG--AELPI------EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAI-AVREGADAVMLSGETAH 411 (515)
Q Consensus 341 Lg--~elg~------e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~Dvan-aV~~G~D~vmLs~ETa~ 411 (515)
+- +.+|. +.+..-.+.+.++|. |+|+=+ |||. ..-|..|+..... +...|+|.|=-|.-=..
T Consensus 128 IDmViNig~lk~g~~~~v~~eI~~v~~a~~--~~~lKV---IlEt----~~Lt~eei~~A~~ia~eaGADfVKTSTGf~~ 198 (260)
T 3r12_A 128 IDMVINVGMLKAKEWEYVYEDIRSVVESVK--GKVVKV---IIET----CYLDTEEKIAACVISKLAGAHFVKTSTGFGT 198 (260)
T ss_dssp EEEECCHHHHHTTCHHHHHHHHHHHHHHTT--TSEEEE---ECCG----GGCCHHHHHHHHHHHHHTTCSEEECCCSSSS
T ss_pred EEEEeehhhhccccHHHHHHHHHHHHHhcC--CCcEEE---EEeC----CCCCHHHHHHHHHHHHHhCcCEEEcCCCCCC
Confidence 22 22322 234444455555553 455422 3443 3446677666554 45579999887622112
Q ss_pred CCCHHHHHHHHHHHH
Q 010211 412 GKFPLKAVKVMHTVA 426 (515)
Q Consensus 412 G~yPveaV~~m~~I~ 426 (515)
|---++.|+.|++.+
T Consensus 199 ~GAT~edV~lm~~~v 213 (260)
T 3r12_A 199 GGATAEDVHLMKWIV 213 (260)
T ss_dssp CCCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHh
Confidence 233468999999875
No 109
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=75.14 E-value=11 Score=37.29 Aligned_cols=97 Identities=15% Similarity=0.159 Sum_probs=59.5
Q ss_pred HHhhcchhcCCcEEEec------ccCCHHHHHH-HHHHHHhcCCCceEEEEe---cChhhhhcHHHHHhh-cCeeEEcCC
Q 010211 271 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKI---ESADSIPNLHSIISA-SDGAMVARG 339 (515)
Q Consensus 271 ~dI~~al~~gvD~ValS------fVrsa~dv~~-vr~~l~~~~~~i~IIaKI---Et~~aveNldeIl~~-sDgImIgrg 339 (515)
+.++|-++.|+|++.+. +.-+.++-.+ ++..++..+.++.||+-+ -|.++++......+. +|++|+-+-
T Consensus 27 ~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 106 (292)
T 3daq_A 27 AHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLITP 106 (292)
T ss_dssp HHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEECCC
Confidence 44567789999998763 2222333323 344445557789999988 466677666666555 899999754
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcCCcEEEE
Q 010211 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (515)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aGKPvivA 371 (515)
...- ..-+.+....+.| +.+.+.|+++.
T Consensus 107 ~y~~-~~~~~l~~~f~~i---a~a~~lPiilY 134 (292)
T 3daq_A 107 YYNK-TNQRGLVKHFEAI---ADAVKLPVVLY 134 (292)
T ss_dssp CSSC-CCHHHHHHHHHHH---HHHHCSCEEEE
T ss_pred CCCC-CCHHHHHHHHHHH---HHhCCCCEEEE
Confidence 3321 1223444444454 44458999985
No 110
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=74.87 E-value=31 Score=31.72 Aligned_cols=126 Identities=13% Similarity=0.091 Sum_probs=67.8
Q ss_pred cchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh-cCeeEEcCC---cc----cccCC
Q 010211 275 FGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARG---DL----GAELP 346 (515)
Q Consensus 275 ~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDgImIgrg---DL----g~elg 346 (515)
.+.+.|+|+|.++... .++.++++.+ +. ..+-.-..|.+- +.+..+. +|.+++++. .- +...+
T Consensus 89 ~a~~~gad~v~l~~~~--~~~~~~~~~~---g~-~~~~~s~~t~~e---~~~a~~~g~d~v~~~~v~~t~~~~~~~~~~~ 159 (227)
T 2tps_A 89 LALNLKADGIHIGQED--ANAKEVRAAI---GD-MILGVSAHTMSE---VKQAEEDGADYVGLGPIYPTETKKDTRAVQG 159 (227)
T ss_dssp HHHHHTCSEEEECTTS--SCHHHHHHHH---TT-SEEEEEECSHHH---HHHHHHHTCSEEEECCSSCCCSSSSCCCCCT
T ss_pred HHHHcCCCEEEECCCc--cCHHHHHHhc---CC-cEEEEecCCHHH---HHHHHhCCCCEEEECCCcCCCCCCCCCCccC
Confidence 4557799999876432 2355555433 33 222222344432 2232233 899998642 11 11222
Q ss_pred CCCHHHHHHHHHHHHHhcC-CcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecccccCCCCHHHHHHHHHHH
Q 010211 347 IEDVPLLQEDIIRRCRSMQ-KPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTV 425 (515)
Q Consensus 347 ~e~v~~aqk~Ii~~c~~aG-KPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ETa~G~yPveaV~~m~~I 425 (515)
++. .+++ +.... +|++.+. ...|. ++..++..|+|++.+.+---..+.|.++++.+.+.
T Consensus 160 ~~~----l~~~---~~~~~~~pvia~G--------GI~~~-----nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~~ 219 (227)
T 2tps_A 160 VSL----IEAV---RRQGISIPIVGIG--------GITID-----NAAPVIQAGADGVSMISAISQAEDPESAARKFREE 219 (227)
T ss_dssp THH----HHHH---HHTTCCCCEEEES--------SCCTT-----TSHHHHHTTCSEEEESHHHHTSSCHHHHHHHHHHH
T ss_pred HHH----HHHH---HHhCCCCCEEEEc--------CCCHH-----HHHHHHHcCCCEEEEhHHhhcCCCHHHHHHHHHHH
Confidence 222 2222 33345 8988753 22233 33355667999999876544456788888877776
Q ss_pred HHHH
Q 010211 426 ALRT 429 (515)
Q Consensus 426 ~~~a 429 (515)
+++.
T Consensus 220 ~~~~ 223 (227)
T 2tps_A 220 IQTY 223 (227)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 6554
No 111
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=74.66 E-value=28 Score=32.93 Aligned_cols=144 Identities=15% Similarity=0.170 Sum_probs=78.8
Q ss_pred CCCCHhhHHHh-hcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHH-------hh-cCe
Q 010211 263 PSITDKDWEDI-KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSII-------SA-SDG 333 (515)
Q Consensus 263 p~ltekD~~dI-~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl-------~~-sDg 333 (515)
|..|+.|.+.+ +.+.++|++.|++. ++-+...++.+. .+.+.+-++-|.|....+... +. +|+
T Consensus 15 p~~t~~~i~~l~~~a~~~g~~~v~v~----~~~v~~~~~~l~----~v~v~~v~~~P~g~~~~~~k~~~~~~A~~~Gad~ 86 (225)
T 1mzh_A 15 PHLSEKEIEEFVLKSEELGIYAVCVN----PYHVKLASSIAK----KVKVCCVIGFPLGLNKTSVKVKEAVEAVRDGAQE 86 (225)
T ss_dssp TTCCHHHHHHHHHHHHHTTCSEEEEC----GGGHHHHHHHCS----SSEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSE
T ss_pred CCCCHHHHHHHHHHHHHhCCeEEEEC----HHHHHHHHHHhc----CCceeeEecCCCCccchhhhHHHHHHHHHcCCCE
Confidence 66788888665 56778999987643 444555555553 567877888777765544321 22 455
Q ss_pred eEEcCCcccccCCC---CCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHH-HHhCCcEEeecccc
Q 010211 334 AMVARGDLGAELPI---EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIA-VREGADAVMLSGET 409 (515)
Q Consensus 334 ImIgrgDLg~elg~---e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~Dvana-V~~G~D~vmLs~ET 409 (515)
|=+ -+.+|- .+...+.+. +++.+++..|+++-- ++|+ +.-+..++...+.. ...|+|++-.+.--
T Consensus 87 Id~-----viN~g~~~~~~~~~~~~~-i~~v~~a~~pv~vKv-i~e~----~~l~~~~~~~~a~~a~eaGad~I~tstg~ 155 (225)
T 1mzh_A 87 LDI-----VWNLSAFKSEKYDFVVEE-LKEIFRETPSAVHKV-IVET----PYLNEEEIKKAVEICIEAGADFIKTSTGF 155 (225)
T ss_dssp EEE-----ECCHHHHHTTCHHHHHHH-HHHHHHTCTTSEEEE-ECCG----GGCCHHHHHHHHHHHHHHTCSEEECCCSC
T ss_pred EEE-----EecHHHHhcCChHHHHHH-HHHHHHHhcCceEEE-EEeC----CCCCHHHHHHHHHHHHHhCCCEEEECCCC
Confidence 531 112211 122333333 555555544876522 2332 33455565555544 45699999544311
Q ss_pred cCCCCHHHHHHHHHHH
Q 010211 410 AHGKFPLKAVKVMHTV 425 (515)
Q Consensus 410 a~G~yPveaV~~m~~I 425 (515)
..|.+-.+.++.|.+.
T Consensus 156 ~~gga~~~~i~~v~~~ 171 (225)
T 1mzh_A 156 APRGTTLEEVRLIKSS 171 (225)
T ss_dssp SSSCCCHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHH
Confidence 1244456777666543
No 112
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=74.61 E-value=23 Score=36.25 Aligned_cols=114 Identities=18% Similarity=0.295 Sum_probs=59.5
Q ss_pred chhcCCcEEEec-------ccCCHHHHHHHHHHHHhcCCCceEEEE-ecChhhhhcHHHHHhh-cCeeEEcCCcccc---
Q 010211 276 GVDNQVDFYAVS-------FVKDAKVVHELKDYLKSCNADIHVIVK-IESADSIPNLHSIISA-SDGAMVARGDLGA--- 343 (515)
Q Consensus 276 al~~gvD~ValS-------fVrsa~dv~~vr~~l~~~~~~i~IIaK-IEt~~aveNldeIl~~-sDgImIgrgDLg~--- 343 (515)
..+.|+|++.+. +......+..++.+.+.. +++|+++ |-|++. .....+. +|+|+||.|--+.
T Consensus 174 ~~~agad~i~i~~~~~~~~~~~~~~~~~~i~~l~~~~--~~pvi~ggi~t~e~---a~~~~~~Gad~i~vg~Gg~~~~~~ 248 (393)
T 2qr6_A 174 VIKAGADLLVIQGTLISAEHVNTGGEALNLKEFIGSL--DVPVIAGGVNDYTT---ALHMMRTGAVGIIVGGGENTNSLA 248 (393)
T ss_dssp HHHTTCSEEEEECSSCCSSCCCC-----CHHHHHHHC--SSCEEEECCCSHHH---HHHHHTTTCSEEEESCCSCCHHHH
T ss_pred HHHCCCCEEEEeCCccccccCCCcccHHHHHHHHHhc--CCCEEECCcCCHHH---HHHHHHcCCCEEEECCCccccccc
Confidence 345688988654 222111233344333332 5677774 333332 2333334 8999998743111
Q ss_pred -cCCCCCHHHHHHHHHHHH----HhcC---CcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecc
Q 010211 344 -ELPIEDVPLLQEDIIRRC----RSMQ---KPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 407 (515)
Q Consensus 344 -elg~e~v~~aqk~Ii~~c----~~aG---KPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ 407 (515)
..|.+ ......++.+.+ .+.+ .|+|.+ .+.-+ -.|++.++..|+|++++..
T Consensus 249 ~~~g~~-~~~~l~~v~~~~~~~~~~~~~~~ipvia~---------GGI~~---~~dv~kalalGA~~V~iG~ 307 (393)
T 2qr6_A 249 LGMEVS-MATAIADVAAARRDYLDETGGRYVHIIAD---------GSIEN---SGDVVKAIACGADAVVLGS 307 (393)
T ss_dssp TSCCCC-HHHHHHHHHHHHHHHHHHHTSCCCEEEEC---------SSCCS---HHHHHHHHHHTCSEEEECG
T ss_pred CCCCCC-hHHHHHHHHHHHHHhHhhcCCcceEEEEE---------CCCCC---HHHHHHHHHcCCCEEEECH
Confidence 11222 233344444443 2244 788873 33333 3478899999999999853
No 113
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=74.38 E-value=11 Score=35.33 Aligned_cols=112 Identities=21% Similarity=0.227 Sum_probs=64.7
Q ss_pred HHHhhcchhcCCcEEEec-----ccCC----HHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh-cCeeEEcCC
Q 010211 270 WEDIKFGVDNQVDFYAVS-----FVKD----AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARG 339 (515)
Q Consensus 270 ~~dI~~al~~gvD~ValS-----fVrs----a~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDgImIgrg 339 (515)
.++++.+.+.|+|++-+- |+.+ .+.++++++. .+..+.+..++..++ +.++...+. +|+|.+.-.
T Consensus 26 ~~~i~~~~~~G~d~i~l~~~dg~f~~~~~~~~~~i~~l~~~---~~~~~~v~l~vnd~~--~~v~~~~~~Gad~v~vh~~ 100 (230)
T 1rpx_A 26 GEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPI---TDLPLDVHLMIVEPD--QRVPDFIKAGADIVSVHCE 100 (230)
T ss_dssp HHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHGGG---CCSCEEEEEESSSHH--HHHHHHHHTTCSEEEEECS
T ss_pred HHHHHHHHHCCCCEEEEeeccCCcccccccCHHHHHHHHhc---cCCcEEEEEEecCHH--HHHHHHHHcCCCEEEEEec
Confidence 356677778899988774 5443 2333333332 233456667887743 456666666 899988622
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeec
Q 010211 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (515)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs 406 (515)
.. +.+.. .+.++.++++|+.++++. ....|. |. ..++..++|.+++.
T Consensus 101 -~~---~~~~~----~~~~~~~~~~g~~ig~~~-------~p~t~~--e~---~~~~~~~~d~vl~~ 147 (230)
T 1rpx_A 101 -QS---STIHL----HRTINQIKSLGAKAGVVL-------NPGTPL--TA---IEYVLDAVDLVLIM 147 (230)
T ss_dssp -TT---TCSCH----HHHHHHHHHTTSEEEEEE-------CTTCCG--GG---GTTTTTTCSEEEEE
T ss_pred -Cc---cchhH----HHHHHHHHHcCCcEEEEe-------CCCCCH--HH---HHHHHhhCCEEEEE
Confidence 00 11232 466777888899988864 111222 21 13345789988543
No 114
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=74.37 E-value=65 Score=31.15 Aligned_cols=130 Identities=18% Similarity=0.224 Sum_probs=66.5
Q ss_pred hhHHHh-hcchh-cCCcEEEeccc------------CCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHh----
Q 010211 268 KDWEDI-KFGVD-NQVDFYAVSFV------------KDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIIS---- 329 (515)
Q Consensus 268 kD~~dI-~~al~-~gvD~ValSfV------------rsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~---- 329 (515)
++.... +.+.+ .|+|+|-+.|- .+.+.+.++-+.+.+.- ++.|++|+= + ++.++.++++
T Consensus 111 ~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~-~~pv~vk~~-~-~~~~~~~~a~~l~~ 187 (311)
T 1ep3_A 111 ADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVS-KVPLYVKLS-P-NVTDIVPIAKAVEA 187 (311)
T ss_dssp HHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHC-SSCEEEEEC-S-CSSCSHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhc-CCCEEEEEC-C-ChHHHHHHHHHHHH
Confidence 444333 34444 79999866542 23444444434443321 477888874 1 2234444333
Q ss_pred h-cCeeEEcCCcccc-----------------cCCCCCHHHHHHHHHHH-HHhcCCcEEEEeccccccccCCCcChHHHh
Q 010211 330 A-SDGAMVARGDLGA-----------------ELPIEDVPLLQEDIIRR-CRSMQKPVIVATNMLESMIDHPTPTRAEVS 390 (515)
Q Consensus 330 ~-sDgImIgrgDLg~-----------------elg~e~v~~aqk~Ii~~-c~~aGKPvivATqmLeSMi~~~~PtrAEv~ 390 (515)
. +|+|.+.-+..+. --|....+.. -..++. .+....|++.+ .+.-+. .
T Consensus 188 ~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~-~~~i~~i~~~~~ipvia~---------GGI~~~---~ 254 (311)
T 1ep3_A 188 AGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVA-LKLIHQVAQDVDIPIIGM---------GGVANA---Q 254 (311)
T ss_dssp TTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHH-HHHHHHHHTTCSSCEEEC---------SSCCSH---H
T ss_pred cCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHH-HHHHHHHHHhcCCCEEEE---------CCcCCH---H
Confidence 2 8999983211110 0121222222 233333 33458898873 333332 3
Q ss_pred HHHHHHHhCCcEEeecccccCCC
Q 010211 391 DIAIAVREGADAVMLSGETAHGK 413 (515)
Q Consensus 391 DvanaV~~G~D~vmLs~ETa~G~ 413 (515)
|+..++..|+|+|++..---.+.
T Consensus 255 d~~~~l~~GAd~V~vg~~~l~~p 277 (311)
T 1ep3_A 255 DVLEMYMAGASAVAVGTANFADP 277 (311)
T ss_dssp HHHHHHHHTCSEEEECTHHHHCT
T ss_pred HHHHHHHcCCCEEEECHHHHcCc
Confidence 56678888999999864433343
No 115
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=73.91 E-value=70 Score=32.71 Aligned_cols=117 Identities=21% Similarity=0.197 Sum_probs=63.8
Q ss_pred cCCcEEEecc----------cCCHHHHHHHHHHHHhc------CCCceEEEEecChhhhhcHHHHHhh-----cCeeEEc
Q 010211 279 NQVDFYAVSF----------VKDAKVVHELKDYLKSC------NADIHVIVKIESADSIPNLHSIISA-----SDGAMVA 337 (515)
Q Consensus 279 ~gvD~ValSf----------Vrsa~dv~~vr~~l~~~------~~~i~IIaKIEt~~aveNldeIl~~-----sDgImIg 337 (515)
.++|+|-+.+ .++.+.+.++-+.+.+. ..++.|++||=--...+++.+|++. +|||.+-
T Consensus 175 ~~ad~ielNisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~p~~~~~~~~~ia~~~~~aGadgi~v~ 254 (367)
T 3zwt_A 175 PLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVT 254 (367)
T ss_dssp GGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCGGGCCEEEEEECSCCCHHHHHHHHHHHHHHTCCEEEEC
T ss_pred hhCCEEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHhhccccCCceEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 3578877643 23344444433333221 1468899999422222355666654 7999864
Q ss_pred -----CCc-----ccccCC-C---CCHHHHHHHHHHHHHhc--CCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCc
Q 010211 338 -----RGD-----LGAELP-I---EDVPLLQEDIIRRCRSM--QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGAD 401 (515)
Q Consensus 338 -----rgD-----Lg~elg-~---e~v~~aqk~Ii~~c~~a--GKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D 401 (515)
|-+ ++.+.| + +..+...+.+-+..++. ..|+|.. .+.-+ ..|+..++..|+|
T Consensus 255 ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~---------GGI~s---~~da~~~l~~GAd 322 (367)
T 3zwt_A 255 NTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGV---------GGVSS---GQDALEKIRAGAS 322 (367)
T ss_dssp CCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEE---------SSCCS---HHHHHHHHHHTCS
T ss_pred CCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEE---------CCCCC---HHHHHHHHHcCCC
Confidence 211 111121 1 22333444444444455 6898874 34433 3467788889999
Q ss_pred EEeecc
Q 010211 402 AVMLSG 407 (515)
Q Consensus 402 ~vmLs~ 407 (515)
+||+..
T Consensus 323 ~V~vgr 328 (367)
T 3zwt_A 323 LVQLYT 328 (367)
T ss_dssp EEEESH
T ss_pred EEEECH
Confidence 999864
No 116
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=73.39 E-value=42 Score=31.45 Aligned_cols=132 Identities=17% Similarity=0.206 Sum_probs=69.9
Q ss_pred HHHhhcchhcCCcEEEecc--cCCHHHHHHHHHHHHhcCC-CceEEEE---------ecCh--------hhhhcHHHHHh
Q 010211 270 WEDIKFGVDNQVDFYAVSF--VKDAKVVHELKDYLKSCNA-DIHVIVK---------IESA--------DSIPNLHSIIS 329 (515)
Q Consensus 270 ~~dI~~al~~gvD~ValSf--Vrsa~dv~~vr~~l~~~~~-~i~IIaK---------IEt~--------~aveNldeIl~ 329 (515)
.++++.+++.|+|+|.++- ..+++.+.++.+.+ +. .+.+-.- +++. ..++-+.++.+
T Consensus 87 ~~~~~~~~~~Gad~V~lg~~~l~~p~~~~~~~~~~---~~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~ 163 (252)
T 1ka9_F 87 LEDARKLLLSGADKVSVNSAAVRRPELIRELADHF---GAQAVVLAIDARWRGDFPEVHVAGGRVPTGLHAVEWAVKGVE 163 (252)
T ss_dssp HHHHHHHHHHTCSEEEECHHHHHCTHHHHHHHHHH---CGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEChHHHhCcHHHHHHHHHc---CCCcEEEEEEEecCCCCEEEEECCCccccCCcHHHHHHHHHH
Confidence 3566667778999988853 33444444444433 32 2222221 2221 12444555555
Q ss_pred h-cCeeEEcC-C-cccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeec
Q 010211 330 A-SDGAMVAR-G-DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (515)
Q Consensus 330 ~-sDgImIgr-g-DLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs 406 (515)
. ++++++.. + | +...|. + ....+++ ++..+.|++. ..+.-+.. |+..+...|+|++|..
T Consensus 164 ~G~~~i~~~~~~~~-g~~~g~-~-~~~i~~l---~~~~~ipvia---------~GGI~~~~---d~~~~~~~Gadgv~vg 225 (252)
T 1ka9_F 164 LGAGEILLTSMDRD-GTKEGY-D-LRLTRMV---AEAVGVPVIA---------SGGAGRME---HFLEAFQAGAEAALAA 225 (252)
T ss_dssp HTCCEEEEEETTTT-TTCSCC-C-HHHHHHH---HHHCSSCEEE---------ESCCCSHH---HHHHHHHTTCSEEEES
T ss_pred cCCCEEEEecccCC-CCcCCC-C-HHHHHHH---HHHcCCCEEE---------eCCCCCHH---HHHHHHHCCCHHHHHH
Confidence 5 78888752 1 1 122232 2 2222333 4455899987 34555544 4445556799999986
Q ss_pred ccccCCC-CHHHHHHHH
Q 010211 407 GETAHGK-FPLKAVKVM 422 (515)
Q Consensus 407 ~ETa~G~-yPveaV~~m 422 (515)
.---.+. -|-++.+.+
T Consensus 226 sal~~~~~~~~~~~~~l 242 (252)
T 1ka9_F 226 SVFHFGEIPIPKLKRYL 242 (252)
T ss_dssp HHHHTTSSCHHHHHHHH
T ss_pred HHHHcCCCCHHHHHHHH
Confidence 5555566 455555554
No 117
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=73.33 E-value=29 Score=32.58 Aligned_cols=133 Identities=11% Similarity=0.077 Sum_probs=68.6
Q ss_pred HHHhhcchhcCCcEEEecc--cCCHHHHHHHHHHHHhcCC-CceEEEE---------ecCh--------hhhhcHHHHHh
Q 010211 270 WEDIKFGVDNQVDFYAVSF--VKDAKVVHELKDYLKSCNA-DIHVIVK---------IESA--------DSIPNLHSIIS 329 (515)
Q Consensus 270 ~~dI~~al~~gvD~ValSf--Vrsa~dv~~vr~~l~~~~~-~i~IIaK---------IEt~--------~aveNldeIl~ 329 (515)
.++++.+++.|+|+|.+.. ..+++.+ .++++..+. .+.+-.. +++. ..++-+.++.+
T Consensus 86 ~~~~~~~~~~Gad~V~lg~~~l~~p~~~---~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~ 162 (253)
T 1thf_D 86 FETASELILRGADKVSINTAAVENPSLI---TQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEK 162 (253)
T ss_dssp HHHHHHHHHTTCSEEEESHHHHHCTHHH---HHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEChHHHhChHHH---HHHHHHcCCCcEEEEEEEEccCCcEEEEECCCccccCCCHHHHHHHHHH
Confidence 4556666778999998753 1233333 344433343 2222211 2222 12344455555
Q ss_pred h-cCeeEEcC-C-cccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeec
Q 010211 330 A-SDGAMVAR-G-DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (515)
Q Consensus 330 ~-sDgImIgr-g-DLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs 406 (515)
. +|.|++-. . | +...|+ . ....+++. +..+.|++. ..+.-+.. |+..+...|+|+++..
T Consensus 163 ~G~~~i~~~~~~~~-g~~~g~-~-~~~~~~l~---~~~~ipvia---------~GGI~~~~---d~~~~~~~Gadgv~vG 224 (253)
T 1thf_D 163 RGAGEILLTSIDRD-GTKSGY-D-TEMIRFVR---PLTTLPIIA---------SGGAGKME---HFLEAFLAGADAALAA 224 (253)
T ss_dssp TTCSEEEEEETTTT-TSCSCC-C-HHHHHHHG---GGCCSCEEE---------ESCCCSHH---HHHHHHHTTCSEEEES
T ss_pred CCCCEEEEEeccCC-CCCCCC-C-HHHHHHHH---HhcCCCEEE---------ECCCCCHH---HHHHHHHcCChHHHHH
Confidence 5 78888731 1 1 111232 2 22333333 345899987 34555544 4445556899999986
Q ss_pred ccccCCC-CHHHHHHHHH
Q 010211 407 GETAHGK-FPLKAVKVMH 423 (515)
Q Consensus 407 ~ETa~G~-yPveaV~~m~ 423 (515)
.---.+. -|-++++.+.
T Consensus 225 sal~~~~~~~~~~~~~l~ 242 (253)
T 1thf_D 225 SVFHFREIDVRELKEYLK 242 (253)
T ss_dssp HHHHTTCSCHHHHHHHHH
T ss_pred HHHHcCCCCHHHHHHHHH
Confidence 4333454 4666666653
No 118
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=73.20 E-value=61 Score=30.35 Aligned_cols=119 Identities=17% Similarity=0.139 Sum_probs=67.1
Q ss_pred HHhhcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhhcCeeE-E-c-CCcccccCCC
Q 010211 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAM-V-A-RGDLGAELPI 347 (515)
Q Consensus 271 ~dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDgIm-I-g-rgDLg~elg~ 347 (515)
+.++.+.+.|+|+|.++.. ..++...+.+++++.+.+..+ -+......+.+..+...+|+++ + . +|-.+..-+.
T Consensus 99 ~~~~~~~~~Gad~v~~~~~-~~~~~~~~~~~~~~~g~~~~~--~i~~~t~~e~~~~~~~~~d~~i~~~~~~G~~g~~~~~ 175 (248)
T 1geq_A 99 NFLAEAKASGVDGILVVDL-PVFHAKEFTEIAREEGIKTVF--LAAPNTPDERLKVIDDMTTGFVYLVSLYGTTGAREEI 175 (248)
T ss_dssp HHHHHHHHHTCCEEEETTC-CGGGHHHHHHHHHHHTCEEEE--EECTTCCHHHHHHHHHHCSSEEEEECCC-------CC
T ss_pred HHHHHHHHCCCCEEEECCC-ChhhHHHHHHHHHHhCCCeEE--EECCCCHHHHHHHHHhcCCCeEEEEECCccCCCCCCC
Confidence 5667777889999998743 456777777778777655444 4433334455677777788433 2 2 2222222121
Q ss_pred CCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeec
Q 010211 348 EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (515)
Q Consensus 348 e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs 406 (515)
-+...+.+-+.+...+.|++.. .+.-+.. ++..++..|+|++.+.
T Consensus 176 --~~~~~~~i~~l~~~~~~pi~~~---------GGI~~~e---~i~~~~~~Gad~vivG 220 (248)
T 1geq_A 176 --PKTAYDLLRRAKRICRNKVAVG---------FGVSKRE---HVVSLLKEGANGVVVG 220 (248)
T ss_dssp --CHHHHHHHHHHHHHCSSCEEEE---------SCCCSHH---HHHHHHHTTCSEEEEC
T ss_pred --ChhHHHHHHHHHhhcCCCEEEE---------eecCCHH---HHHHHHHcCCCEEEEc
Confidence 1222333333344447898874 2333322 4556667899999874
No 119
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=73.16 E-value=49 Score=34.71 Aligned_cols=87 Identities=17% Similarity=0.141 Sum_probs=50.9
Q ss_pred Cce-EEEEecChhhhhcHHHHHhh-----cCeeEEcCC-----cc---cccC----CCCCHHHHHHHHHHHHHhc--CCc
Q 010211 308 DIH-VIVKIESADSIPNLHSIISA-----SDGAMVARG-----DL---GAEL----PIEDVPLLQEDIIRRCRSM--QKP 367 (515)
Q Consensus 308 ~i~-IIaKIEt~~aveNldeIl~~-----sDgImIgrg-----DL---g~el----g~e~v~~aqk~Ii~~c~~a--GKP 367 (515)
+.+ |++||=--..-+++.+|++. +|||.+--. |+ ..+. |.+..+...+.|-+..++. .+|
T Consensus 268 ~~P~V~VKi~pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iP 347 (415)
T 3i65_A 268 KKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIP 347 (415)
T ss_dssp SCCEEEEEECSCCCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSC
T ss_pred CCCeEEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCC
Confidence 567 89999432222356666664 799987621 21 1111 1123344444444445555 478
Q ss_pred EEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeec
Q 010211 368 VIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (515)
Q Consensus 368 vivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs 406 (515)
+|. ..+.-+ ..|+..++..|+|+|++.
T Consensus 348 IIg---------~GGI~s---~eDa~e~l~aGAd~VqIg 374 (415)
T 3i65_A 348 IIA---------SGGIFS---GLDALEKIEAGASVCQLY 374 (415)
T ss_dssp EEE---------CSSCCS---HHHHHHHHHHTEEEEEES
T ss_pred EEE---------ECCCCC---HHHHHHHHHcCCCEEEEc
Confidence 886 334433 347788899999999986
No 120
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=73.09 E-value=13 Score=37.25 Aligned_cols=145 Identities=18% Similarity=0.156 Sum_probs=83.3
Q ss_pred CCCCHhhHHHh-hcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh--------cCe
Q 010211 263 PSITDKDWEDI-KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA--------SDG 333 (515)
Q Consensus 263 p~ltekD~~dI-~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~--------sDg 333 (515)
|..|..|++.+ +.+.++|+..|+++ +..+..+++.|+ +..+.|.+=|==|.|-...+.-+.. +|.
T Consensus 69 p~~T~~dI~~lc~eA~~~g~aaVCV~----P~~V~~a~~~L~--~s~V~V~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdE 142 (288)
T 3oa3_A 69 LSATGSQIDVLCAEAKEYGFATVCVR----PDYVSRAVQYLQ--GTQVGVTCVIGFHEGTYSTDQKVSEAKRAMQNGASE 142 (288)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHHHHHHHTT--TSSCEEEEEESTTTSCSCHHHHHHHHHHHHHTTCSE
T ss_pred CCCCHHHHHHHHHHHHhcCCcEEEEC----HHHHHHHHHHcC--CCCCeEEEEeCCCCCCCcHHHHHHHHHHHHHcCCCE
Confidence 66788888655 77888999999875 557778888884 3457776666544443433322221 333
Q ss_pred eEEcCCcccccCCC---CCHHHHHHHHHHHHHhcCCc---EEEEeccccccccCCCcChHHHhHHH-HHHHhCCcEEeec
Q 010211 334 AMVARGDLGAELPI---EDVPLLQEDIIRRCRSMQKP---VIVATNMLESMIDHPTPTRAEVSDIA-IAVREGADAVMLS 406 (515)
Q Consensus 334 ImIgrgDLg~elg~---e~v~~aqk~Ii~~c~~aGKP---vivATqmLeSMi~~~~PtrAEv~Dva-naV~~G~D~vmLs 406 (515)
|= .-+.+|. .+...+.++|-..+.+++.| ||+ | ....+..|+.... -+...|+|.|=-|
T Consensus 143 ID-----mVINig~lk~g~~~~v~~eI~~V~~a~~~~~lKVIl-----E----t~~Lt~eei~~A~~ia~eaGADfVKTS 208 (288)
T 3oa3_A 143 LD-----MVMNYPWLSEKRYTDVFQDIRAVRLAAKDAILKVIL-----E----TSQLTADEIIAGCVLSSLAGADYVKTS 208 (288)
T ss_dssp EE-----EECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEEC-----C----GGGCCHHHHHHHHHHHHHTTCSEEECC
T ss_pred EE-----EEeehhhhcCCcHHHHHHHHHHHHHHhcCCCceEEE-----E----CCCCCHHHHHHHHHHHHHcCCCEEEcC
Confidence 32 1123332 23334444444333333433 344 2 2344666755543 3556899999766
Q ss_pred cc-ccCCCCHHHHHHHHHHHHHH
Q 010211 407 GE-TAHGKFPLKAVKVMHTVALR 428 (515)
Q Consensus 407 ~E-Ta~G~yPveaV~~m~~I~~~ 428 (515)
.- +..|. -++.|+.|+++++.
T Consensus 209 TGf~~~GA-T~edv~lmr~~v~~ 230 (288)
T 3oa3_A 209 TGFNGPGA-SIENVSLMSAVCDS 230 (288)
T ss_dssp CSSSSCCC-CHHHHHHHHHHHHH
T ss_pred CCCCCCCC-CHHHHHHHHHHHHH
Confidence 21 22233 45889999999864
No 121
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=73.08 E-value=12 Score=37.19 Aligned_cols=98 Identities=10% Similarity=0.042 Sum_probs=59.3
Q ss_pred HHhhcchhcCCcEEEec------ccCCHHHHHH-HHHHHHhcCCCceEEEEe---cChhhhhcHHHHHhh-cCeeEEcC-
Q 010211 271 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKI---ESADSIPNLHSIISA-SDGAMVAR- 338 (515)
Q Consensus 271 ~dI~~al~~gvD~ValS------fVrsa~dv~~-vr~~l~~~~~~i~IIaKI---Et~~aveNldeIl~~-sDgImIgr- 338 (515)
+.++|-++.|+|++.+. +.-+.++-.+ ++...+..+.++.||+-+ -|.++++......+. +|++|+-+
T Consensus 39 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 118 (307)
T 3s5o_A 39 ENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVGADAAMVVTP 118 (307)
T ss_dssp HHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 44567788999998752 2233333333 344455567789999987 456666666655555 89999853
Q ss_pred CcccccCCCCCHHHHHHHHHHHHHhcCCcEEEE
Q 010211 339 GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (515)
Q Consensus 339 gDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivA 371 (515)
........-+.+....+.| +.+.+.|+++.
T Consensus 119 ~y~~~~~s~~~l~~~f~~i---a~a~~lPiilY 148 (307)
T 3s5o_A 119 CYYRGRMSSAALIHHYTKV---ADLSPIPVVLY 148 (307)
T ss_dssp CTTGGGCCHHHHHHHHHHH---HHHCSSCEEEE
T ss_pred CcCCCCCCHHHHHHHHHHH---HhhcCCCEEEE
Confidence 3332112223444444444 55678999985
No 122
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=72.70 E-value=59 Score=31.71 Aligned_cols=122 Identities=10% Similarity=0.130 Sum_probs=78.5
Q ss_pred HHhhcchhcCCcEEEecccC--C---------HHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhhcCeeEEcCC
Q 010211 271 EDIKFGVDNQVDFYAVSFVK--D---------AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARG 339 (515)
Q Consensus 271 ~dI~~al~~gvD~ValSfVr--s---------a~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDgImIgrg 339 (515)
+.++.+.+.|+|+|-...-. + .+.+..++++.++. .+.+++-+-.+..++-+.+ .+|.+-||.+
T Consensus 41 ~~a~~l~~~Ga~~vk~~~fkprts~~~~~g~~~egl~~l~~~~~~~--Gl~~~te~~d~~~~~~l~~---~vd~~kIga~ 115 (262)
T 1zco_A 41 KVAEFLAEVGIKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADEY--GLVTVTEVMDTRHVELVAK---YSDILQIGAR 115 (262)
T ss_dssp HHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHH--TCEEEEECCCGGGHHHHHH---HCSEEEECGG
T ss_pred HHHHHHHHcCCCEEEEEecccCCCcccccCccHHHHHHHHHHHHHc--CCcEEEeeCCHHhHHHHHh---hCCEEEECcc
Confidence 55566677899987654321 1 66777888888664 4788888888777655554 4899999977
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCC-cChHHHhHHHHHHHh-CC-cEEee-cccccCCCCH
Q 010211 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPT-PTRAEVSDIAIAVRE-GA-DAVML-SGETAHGKFP 415 (515)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~-PtrAEv~DvanaV~~-G~-D~vmL-s~ETa~G~yP 415 (515)
++. . ..+++.+-+.||||++. ++. +|-.|+.+.+..+.. |. +.+++ .|=+..-+||
T Consensus 116 ~~~------n-----~~ll~~~a~~~kPV~lk---------~G~~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~ 175 (262)
T 1zco_A 116 NSQ------N-----FELLKEVGKVENPVLLK---------RGMGNTIQELLYSAEYIMAQGNENVILCERGIRTFETAT 175 (262)
T ss_dssp GTT------C-----HHHHHHHTTSSSCEEEE---------CCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSS
T ss_pred ccc------C-----HHHHHHHHhcCCcEEEe---------cCCCCCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcC
Confidence 652 2 22344455589999994 454 588887777766654 54 44443 2212333666
Q ss_pred HH
Q 010211 416 LK 417 (515)
Q Consensus 416 ve 417 (515)
.+
T Consensus 176 ~~ 177 (262)
T 1zco_A 176 RF 177 (262)
T ss_dssp SS
T ss_pred hh
Confidence 55
No 123
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=72.54 E-value=10 Score=37.93 Aligned_cols=100 Identities=15% Similarity=0.129 Sum_probs=58.6
Q ss_pred HHhhcchhcCCcEEEec------ccCCHHHHHH-HHHHHHhcCCCceEEEEe---cChhhhhcHHHHHhh-cCeeEEcCC
Q 010211 271 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKI---ESADSIPNLHSIISA-SDGAMVARG 339 (515)
Q Consensus 271 ~dI~~al~~gvD~ValS------fVrsa~dv~~-vr~~l~~~~~~i~IIaKI---Et~~aveNldeIl~~-sDgImIgrg 339 (515)
+.+++-++.|+|++.+. +.-+.++-.+ ++..++..+.++.||+-+ -|.++++....-.+. +||+|+-+-
T Consensus 33 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 112 (309)
T 3fkr_A 33 RAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTSHYSTQVCAARSLRAQQLGAAMVMAMPP 112 (309)
T ss_dssp HHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEECCS
T ss_pred HHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCCchHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 44567788999998762 1223333333 344445557789999987 356666666665555 899999765
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcCCcEEEE
Q 010211 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (515)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aGKPvivA 371 (515)
....-.. +.-..+.+..-..|.+.+.|+++.
T Consensus 113 yy~~~~~-~s~~~l~~~f~~va~a~~lPiilY 143 (309)
T 3fkr_A 113 YHGATFR-VPEAQIFEFYARVSDAIAIPIMVQ 143 (309)
T ss_dssp CBTTTBC-CCHHHHHHHHHHHHHHCSSCEEEE
T ss_pred CCccCCC-CCHHHHHHHHHHHHHhcCCCEEEE
Confidence 4321011 122333334444455568888875
No 124
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=72.48 E-value=21 Score=36.17 Aligned_cols=131 Identities=12% Similarity=0.169 Sum_probs=65.0
Q ss_pred CCCHhhHHHh--------hcchhcCCcEEEecccC-------------CHH------------HHHHHHHHH-HhcCCCc
Q 010211 264 SITDKDWEDI--------KFGVDNQVDFYAVSFVK-------------DAK------------VVHELKDYL-KSCNADI 309 (515)
Q Consensus 264 ~ltekD~~dI--------~~al~~gvD~ValSfVr-------------sa~------------dv~~vr~~l-~~~~~~i 309 (515)
.||..|++.+ +.+.+.|+|+|=+-... ... -+.++-+.+ +..+.+.
T Consensus 141 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~ 220 (349)
T 3hgj_A 141 PLDEAGMERILQAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPREL 220 (349)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCc
Confidence 5788888776 23467899998663321 111 112222222 3346777
Q ss_pred eEEEEecChh----h--hhcHHHHHh----h-cCeeEEcCCcccccCCCCCHHHHHHHHHHHHH-hcCCcEEEEeccccc
Q 010211 310 HVIVKIESAD----S--IPNLHSIIS----A-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCR-SMQKPVIVATNMLES 377 (515)
Q Consensus 310 ~IIaKIEt~~----a--veNldeIl~----~-sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~-~aGKPvivATqmLeS 377 (515)
.|..||---+ | ++..-++++ . +|.|-+.-|........+.-+..+-..++..+ ..++|++..
T Consensus 221 pV~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~------ 294 (349)
T 3hgj_A 221 PLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVGLRTGAV------ 294 (349)
T ss_dssp CEEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHCCEEEEC------
T ss_pred eEEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHcCceEEEE------
Confidence 8888885321 1 222222332 2 78888864433222111000001112222222 347898873
Q ss_pred cccCCCcChHHHhHHHHHHHhC-CcEEeec
Q 010211 378 MIDHPTPTRAEVSDIAIAVREG-ADAVMLS 406 (515)
Q Consensus 378 Mi~~~~PtrAEv~DvanaV~~G-~D~vmLs 406 (515)
...-+.. +...++..| +|.|++.
T Consensus 295 ---Ggi~t~e---~a~~~l~~G~aD~V~iG 318 (349)
T 3hgj_A 295 ---GLITTPE---QAETLLQAGSADLVLLG 318 (349)
T ss_dssp ---SSCCCHH---HHHHHHHTTSCSEEEES
T ss_pred ---CCCCCHH---HHHHHHHCCCceEEEec
Confidence 2222222 233778888 9999985
No 125
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=71.66 E-value=13 Score=37.24 Aligned_cols=98 Identities=17% Similarity=0.176 Sum_probs=55.3
Q ss_pred HHhhcchhcCCcEEEec------ccCCHHHHHH-HHHHHHhcCCCceEEEEe--cChhhhhcHHHHHhh-cCeeEEcCCc
Q 010211 271 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKI--ESADSIPNLHSIISA-SDGAMVARGD 340 (515)
Q Consensus 271 ~dI~~al~~gvD~ValS------fVrsa~dv~~-vr~~l~~~~~~i~IIaKI--Et~~aveNldeIl~~-sDgImIgrgD 340 (515)
+.++|-++.|+|++.+. +.-+.++-.+ ++..++..+.++.||+-+ -|.++++......+. +|++|+-+--
T Consensus 37 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg~~t~~ai~la~~A~~~Gadavlv~~P~ 116 (316)
T 3e96_A 37 ETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIGYATSTAIELGNAAKAAGADAVMIHMPI 116 (316)
T ss_dssp HHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHHHTCSEEEECCCC
T ss_pred HHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeCcCHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 44567789999998652 1112333333 344455567789999988 333444444333333 8999997432
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcCCcEEEEe
Q 010211 341 LGAELPIEDVPLLQEDIIRRCRSMQKPVIVAT 372 (515)
Q Consensus 341 Lg~elg~e~v~~aqk~Ii~~c~~aGKPvivAT 372 (515)
.. ...-+.+....+.| |.+.+.|+++.-
T Consensus 117 y~-~~s~~~l~~~f~~v---a~a~~lPiilYn 144 (316)
T 3e96_A 117 HP-YVTAGGVYAYFRDI---IEALDFPSLVYF 144 (316)
T ss_dssp CS-CCCHHHHHHHHHHH---HHHHTSCEEEEE
T ss_pred CC-CCCHHHHHHHHHHH---HHhCCCCEEEEe
Confidence 21 11223444444444 445579999863
No 126
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=71.56 E-value=28 Score=33.28 Aligned_cols=112 Identities=9% Similarity=0.044 Sum_probs=69.0
Q ss_pred CCCHhhHHHhhcc-hhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEE--EecCh-------hhhhcHHHHHhh-cC
Q 010211 264 SITDKDWEDIKFG-VDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIV--KIESA-------DSIPNLHSIISA-SD 332 (515)
Q Consensus 264 ~ltekD~~dI~~a-l~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIa--KIEt~-------~aveNldeIl~~-sD 332 (515)
.-++.+...+..+ .+.|+.+|.+ .+.++++++|+.. +++|+. |..-. .-++.+++.++. +|
T Consensus 32 l~~~~~~~~~A~a~~~~Ga~~i~~---~~~~~i~~ir~~v-----~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~Gad 103 (232)
T 3igs_A 32 LDKPEIVAAMALAAEQAGAVAVRI---EGIDNLRMTRSLV-----SVPIIGIIKRDLDESPVRITPFLDDVDALAQAGAA 103 (232)
T ss_dssp TCSHHHHHHHHHHHHHTTCSEEEE---ESHHHHHHHHTTC-----CSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCS
T ss_pred CCCcchHHHHHHHHHHCCCeEEEE---CCHHHHHHHHHhc-----CCCEEEEEeecCCCcceEeCccHHHHHHHHHcCCC
Confidence 3355666666444 5678998764 5788887777643 456664 32100 123456666666 89
Q ss_pred eeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEe
Q 010211 333 GAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVM 404 (515)
Q Consensus 333 gImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vm 404 (515)
.|.++-..+ .. + ...+++++.+++.|.+++.-. .+..| .-.+...|+|.+-
T Consensus 104 ~V~l~~~~~---~~-p---~~l~~~i~~~~~~g~~v~~~v-----------~t~ee---a~~a~~~Gad~Ig 154 (232)
T 3igs_A 104 IIAVDGTAR---QR-P---VAVEALLARIHHHHLLTMADC-----------SSVDD---GLACQRLGADIIG 154 (232)
T ss_dssp EEEEECCSS---CC-S---SCHHHHHHHHHHTTCEEEEEC-----------CSHHH---HHHHHHTTCSEEE
T ss_pred EEEECcccc---CC-H---HHHHHHHHHHHHCCCEEEEeC-----------CCHHH---HHHHHhCCCCEEE
Confidence 998863321 11 1 245677888888999988732 23333 3467889999995
No 127
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=71.42 E-value=68 Score=31.90 Aligned_cols=84 Identities=14% Similarity=0.152 Sum_probs=50.7
Q ss_pred HHhhcchhcCCcEEEeccc----CCHHHHHHHHHHHHh-cCCC-ceEEEEecChhhhhcHHHHHhh-cCeeEEcCCcccc
Q 010211 271 EDIKFGVDNQVDFYAVSFV----KDAKVVHELKDYLKS-CNAD-IHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGA 343 (515)
Q Consensus 271 ~dI~~al~~gvD~ValSfV----rsa~dv~~vr~~l~~-~~~~-i~IIaKIEt~~aveNldeIl~~-sDgImIgrgDLg~ 343 (515)
+.++.+.+.|+|+|.+.+. .+.+++.++.+.... .+-. +.++--+-..+-++++.+.++. ++|+.+||.=+..
T Consensus 181 ~aa~~a~~lGaD~iKv~~~~~~~g~~~~~~~vv~~~~~~~~~P~Vv~aGG~~~~~~~~~~~~a~~aGa~Gv~vGRaI~q~ 260 (304)
T 1to3_A 181 DAAKELGDSGADLYKVEMPLYGKGARSDLLTASQRLNGHINMPWVILSSGVDEKLFPRAVRVAMEAGASGFLAGRAVWSS 260 (304)
T ss_dssp HHHHHHTTSSCSEEEECCGGGGCSCHHHHHHHHHHHHHTCCSCEEECCTTSCTTTHHHHHHHHHHTTCCEEEESHHHHGG
T ss_pred HHHHHHHHcCCCEEEeCCCcCCCCCHHHHHHHHHhccccCCCCeEEEecCCCHHHHHHHHHHHHHcCCeEEEEehHHhCc
Confidence 3456667899999998874 344555554444332 2222 2222244333456778888877 9999999987766
Q ss_pred cCCCCCHHHHH
Q 010211 344 ELPIEDVPLLQ 354 (515)
Q Consensus 344 elg~e~v~~aq 354 (515)
.++.++...+-
T Consensus 261 ~~~~~dp~~~~ 271 (304)
T 1to3_A 261 VIGLPDTELML 271 (304)
T ss_dssp GTTCSCHHHHH
T ss_pred cccCCCHHHHH
Confidence 55444433333
No 128
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=71.25 E-value=41 Score=34.27 Aligned_cols=122 Identities=17% Similarity=0.150 Sum_probs=65.2
Q ss_pred CCCHhhHHHh--------hcchhcCCcEEEecc-------------cCCHHH----------------HHHHHHHHHhcC
Q 010211 264 SITDKDWEDI--------KFGVDNQVDFYAVSF-------------VKDAKV----------------VHELKDYLKSCN 306 (515)
Q Consensus 264 ~ltekD~~dI--------~~al~~gvD~ValSf-------------Vrsa~d----------------v~~vr~~l~~~~ 306 (515)
.||..|++.+ +.+.+.|+|+|=+-. .+...| +..+|+.+ +
T Consensus 150 ~mt~~eI~~~i~~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~v---g 226 (365)
T 2gou_A 150 AMTKADIAQVIADYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAI---G 226 (365)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHH---C
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHc---C
Confidence 5788877555 234678999998732 111111 33344443 4
Q ss_pred CCceEEEEecChh---------hhhcHHHHHhh-----cCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEe
Q 010211 307 ADIHVIVKIESAD---------SIPNLHSIISA-----SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVAT 372 (515)
Q Consensus 307 ~~i~IIaKIEt~~---------aveNldeIl~~-----sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivAT 372 (515)
.+ .|..||-..+ .++...++++. +|.|-+..+...-. +..+. ..+-+..+..++|++...
T Consensus 227 ~~-pv~vris~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~---~~~~~--~~~~~i~~~~~iPvi~~G 300 (365)
T 2gou_A 227 AE-RVGVRLAPLTTLNGTVDADPILTYTAAAALLNKHRIVYLHIAEVDWDDA---PDTPV--SFKRALREAYQGVLIYAG 300 (365)
T ss_dssp GG-GEEEEECSSCCTTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECCBTTBC---CCCCH--HHHHHHHHHCCSEEEEES
T ss_pred CC-cEEEEEccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcCCC---CCccH--HHHHHHHHHCCCcEEEeC
Confidence 45 6788884321 23333333332 78888876543211 11111 112222345578988743
Q ss_pred ccccccccCCCcChHHHhHHHHHHHhC-CcEEeecc
Q 010211 373 NMLESMIDHPTPTRAEVSDIAIAVREG-ADAVMLSG 407 (515)
Q Consensus 373 qmLeSMi~~~~PtrAEv~DvanaV~~G-~D~vmLs~ 407 (515)
.. +. .+...++..| +|+|++..
T Consensus 301 ---------gi-~~---~~a~~~l~~g~aD~V~igR 323 (365)
T 2gou_A 301 ---------RY-NA---EKAEQAINDGLADMIGFGR 323 (365)
T ss_dssp ---------SC-CH---HHHHHHHHTTSCSEEECCH
T ss_pred ---------CC-CH---HHHHHHHHCCCcceehhcH
Confidence 23 32 2445778888 99999863
No 129
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=71.10 E-value=20 Score=35.41 Aligned_cols=98 Identities=7% Similarity=0.090 Sum_probs=60.6
Q ss_pred HHhhcchhcCCcEEEe------cccCCHHHHHHH-HHHHHhcCCCceEEEEec---ChhhhhcHHHHHhh-cCeeEEcCC
Q 010211 271 EDIKFGVDNQVDFYAV------SFVKDAKVVHEL-KDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 339 (515)
Q Consensus 271 ~dI~~al~~gvD~Val------SfVrsa~dv~~v-r~~l~~~~~~i~IIaKIE---t~~aveNldeIl~~-sDgImIgrg 339 (515)
+.++|-++.|+|++.+ ++.-+.++-.++ +...+..+.++.||+-+= |.++++......+. +|++|+.+-
T Consensus 28 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 107 (294)
T 3b4u_A 28 AHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALNAGARNILLAPP 107 (294)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 4557788999999876 233344444443 444555567899999884 46777766666555 899999865
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhc---CCcEEEE
Q 010211 340 DLGAELPIEDVPLLQEDIIRRCRSM---QKPVIVA 371 (515)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~a---GKPvivA 371 (515)
...-...-+.+....+ +.|.+. +.|+++.
T Consensus 108 ~y~~~~s~~~l~~~f~---~va~a~p~~~lPiilY 139 (294)
T 3b4u_A 108 SYFKNVSDDGLFAWFS---AVFSKIGKDARDILVY 139 (294)
T ss_dssp CSSCSCCHHHHHHHHH---HHHHHHCTTCCCEEEE
T ss_pred cCCCCCCHHHHHHHHH---HHHHhcCCCCCcEEEE
Confidence 4422112233333334 445556 7999884
No 130
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=70.89 E-value=29 Score=31.66 Aligned_cols=124 Identities=10% Similarity=0.066 Sum_probs=68.7
Q ss_pred HHhhcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh-cCeeEEcCCcccccCCCCC
Q 010211 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIED 349 (515)
Q Consensus 271 ~dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDgImIgrgDLg~elg~e~ 349 (515)
+.++.+.+.|+|+| ++..-..+ +-++..+. .+.+++.+-|++- +..-++. +|.+-+-++++. |
T Consensus 74 ~~~~~a~~~Gad~i-v~~~~~~~----~~~~~~~~--g~~vi~g~~t~~e---~~~a~~~Gad~vk~~~~~~~---g--- 137 (205)
T 1wa3_A 74 EQCRKAVESGAEFI-VSPHLDEE----ISQFCKEK--GVFYMPGVMTPTE---LVKAMKLGHTILKLFPGEVV---G--- 137 (205)
T ss_dssp HHHHHHHHHTCSEE-ECSSCCHH----HHHHHHHH--TCEEECEECSHHH---HHHHHHTTCCEEEETTHHHH---H---
T ss_pred HHHHHHHHcCCCEE-EcCCCCHH----HHHHHHHc--CCcEECCcCCHHH---HHHHHHcCCCEEEEcCcccc---C---
Confidence 34566778899999 55444433 33344333 4667776555432 2222222 788876543321 1
Q ss_pred HHHHHHHHHHHHHhc-CCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecccccCCCC---HHHHHHHHHHH
Q 010211 350 VPLLQEDIIRRCRSM-QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKF---PLKAVKVMHTV 425 (515)
Q Consensus 350 v~~aqk~Ii~~c~~a-GKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ETa~G~y---PveaV~~m~~I 425 (515)
.+.+-+..... +.|++... ...+ .++..++..|+|++...+-... .. |.+.++.+.++
T Consensus 138 ----~~~~~~l~~~~~~~pvia~G--------GI~~-----~~~~~~~~~Ga~~v~vGs~i~~-~d~~~~~~~~~~~~~~ 199 (205)
T 1wa3_A 138 ----PQFVKAMKGPFPNVKFVPTG--------GVNL-----DNVCEWFKAGVLAVGVGSALVK-GTPDEVREKAKAFVEK 199 (205)
T ss_dssp ----HHHHHHHHTTCTTCEEEEBS--------SCCT-----TTHHHHHHHTCSCEEECHHHHC-SCHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHhCCCCcEEEcC--------CCCH-----HHHHHHHHCCCCEEEECccccC-CCHHHHHHHHHHHHHH
Confidence 12222222334 67877632 2222 2556778899999988654434 55 77888777776
Q ss_pred HHH
Q 010211 426 ALR 428 (515)
Q Consensus 426 ~~~ 428 (515)
+++
T Consensus 200 ~~~ 202 (205)
T 1wa3_A 200 IRG 202 (205)
T ss_dssp HHH
T ss_pred HHh
Confidence 654
No 131
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=70.85 E-value=31 Score=32.93 Aligned_cols=112 Identities=9% Similarity=0.029 Sum_probs=69.1
Q ss_pred CCCHhhHHHhhcc-hhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEe-cCh--------hhhhcHHHHHhh-cC
Q 010211 264 SITDKDWEDIKFG-VDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKI-ESA--------DSIPNLHSIISA-SD 332 (515)
Q Consensus 264 ~ltekD~~dI~~a-l~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKI-Et~--------~aveNldeIl~~-sD 332 (515)
.-++.+...+..+ .+.|+.+|.+ .+.++++++|+.. +++|+..+ +.. .-++.+++.++. +|
T Consensus 32 l~~~~~~~~~A~a~~~~Ga~~i~~---~~~~~i~~ir~~v-----~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~aGad 103 (229)
T 3q58_A 32 MDKPEIVAAMAQAAASAGAVAVRI---EGIENLRTVRPHL-----SVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGAD 103 (229)
T ss_dssp TCSHHHHHHHHHHHHHTTCSEEEE---ESHHHHHHHGGGC-----CSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCS
T ss_pred CCCcchHHHHHHHHHHCCCcEEEE---CCHHHHHHHHHhc-----CCCEEEEEeecCCCCceEeCccHHHHHHHHHcCCC
Confidence 3355666666444 5679998865 5788887777643 45666432 110 123456666666 89
Q ss_pred eeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEe
Q 010211 333 GAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVM 404 (515)
Q Consensus 333 gImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vm 404 (515)
.|.+.-..+ .. + ...+++++.+++.|.+++.-. .+..| .-.+...|+|.+-
T Consensus 104 ~I~l~~~~~---~~-p---~~l~~~i~~~~~~g~~v~~~v-----------~t~ee---a~~a~~~Gad~Ig 154 (229)
T 3q58_A 104 IIAFDASFR---SR-P---VDIDSLLTRIRLHGLLAMADC-----------STVNE---GISCHQKGIEFIG 154 (229)
T ss_dssp EEEEECCSS---CC-S---SCHHHHHHHHHHTTCEEEEEC-----------SSHHH---HHHHHHTTCSEEE
T ss_pred EEEECcccc---CC-h---HHHHHHHHHHHHCCCEEEEec-----------CCHHH---HHHHHhCCCCEEE
Confidence 998753321 11 1 245677888888899988732 23333 3467889999995
No 132
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=70.10 E-value=66 Score=29.54 Aligned_cols=132 Identities=17% Similarity=0.141 Sum_probs=65.9
Q ss_pred HHhhcchhcCCcEEEecc--cCCHHHHHHHHHHHHhcCCC-ceE-----------EEEecC------hhhhhcHHHHHhh
Q 010211 271 EDIKFGVDNQVDFYAVSF--VKDAKVVHELKDYLKSCNAD-IHV-----------IVKIES------ADSIPNLHSIISA 330 (515)
Q Consensus 271 ~dI~~al~~gvD~ValSf--Vrsa~dv~~vr~~l~~~~~~-i~I-----------IaKIEt------~~aveNldeIl~~ 330 (515)
++++.+++.|+|+|.+.. ..+++ .+.++.+..+.+ +.+ .+++.. ...++-+..+.+.
T Consensus 90 ~~~~~~~~~Gad~V~i~~~~~~~~~---~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~~~~~~~~~~~~e~~~~~~~~ 166 (253)
T 1h5y_A 90 EDATTLFRAGADKVSVNTAAVRNPQ---LVALLAREFGSQSTVVAIDAKWNGEYYEVYVKGGREATGLDAVKWAKEVEEL 166 (253)
T ss_dssp HHHHHHHHHTCSEEEESHHHHHCTH---HHHHHHHHHCGGGEEEEEEEEECSSSEEEEETTTTEEEEEEHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEChHHhhCcH---HHHHHHHHcCCCcEEEEEEeecCCCcEEEEEeCCeecCCCCHHHHHHHHHhC
Confidence 445556678999998752 22222 234444443432 221 223321 1223444555555
Q ss_pred -cCeeEEcCCccccc-CCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeeccc
Q 010211 331 -SDGAMVARGDLGAE-LPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGE 408 (515)
Q Consensus 331 -sDgImIgrgDLg~e-lg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~E 408 (515)
+|.|.+..-+.... .|+ . ....+++. +..+.|++.. .+.-+. .|+..+...|+|++++..-
T Consensus 167 G~d~i~~~~~~~~g~~~~~-~-~~~i~~l~---~~~~~pvia~---------GGi~~~---~~~~~~~~~Ga~~v~vgsa 229 (253)
T 1h5y_A 167 GAGEILLTSIDRDGTGLGY-D-VELIRRVA---DSVRIPVIAS---------GGAGRV---EHFYEAAAAGADAVLAASL 229 (253)
T ss_dssp TCSEEEEEETTTTTTCSCC-C-HHHHHHHH---HHCSSCEEEE---------SCCCSH---HHHHHHHHTTCSEEEESHH
T ss_pred CCCEEEEecccCCCCcCcC-C-HHHHHHHH---HhcCCCEEEe---------CCCCCH---HHHHHHHHcCCcHHHHHHH
Confidence 89998754333111 121 2 22233333 3357898874 333333 3555666789999998643
Q ss_pred ccCCCC-HHHHHHHH
Q 010211 409 TAHGKF-PLKAVKVM 422 (515)
Q Consensus 409 Ta~G~y-PveaV~~m 422 (515)
--.+.. +-+..++|
T Consensus 230 l~~~~~~~~~~~~~l 244 (253)
T 1h5y_A 230 FHFRVLSIAQVKRYL 244 (253)
T ss_dssp HHTTSSCHHHHHHHH
T ss_pred HHcCCCCHHHHHHHH
Confidence 333443 34444544
No 133
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=69.89 E-value=16 Score=33.62 Aligned_cols=59 Identities=19% Similarity=0.302 Sum_probs=44.1
Q ss_pred EEecCCEEEEEeec--CCC---CcceEEeccccccc--ccCcCCEEEEe--CCeeEEEEEEEeCCeEE
Q 010211 180 ILKEGQEFNFTIKR--GVS---TEDTVSVNYDDFVN--DVEVGDILLVD--GGMMSLAVKSKTKDLVK 238 (515)
Q Consensus 180 ~L~~G~~v~lt~~~--~~~---~~~~i~v~~~~l~~--~v~~Gd~IliD--DG~I~l~V~~~~~~~v~ 238 (515)
-+++|+++.|+... .++ .+....++...|.. .+++|+.+.+. +|.+..+|++++++.|+
T Consensus 51 Gm~~Ge~~~v~ippe~aYG~~~~~~v~~v~~~~f~~~~~~~~G~~~~~~~~~G~~~~~V~~v~~~~V~ 118 (171)
T 2k8i_A 51 GHEVGDKFDVAVGANDAYGQYDENLVQRVPKDVFMGVDELQVGMRFLAETDQGPVPVEITAVEDDHVV 118 (171)
T ss_dssp TCCTTCEEEEEEETTTSSCCCCTTSEEEEEGGGGTTSSCCCTTCEEEEEETTEEEEEEEEEECSSEEE
T ss_pred CCCCCCEEEEEECcHHhcCCCChhhEEEeeHHHCCcccCccCCcEEEEECCCCcEEEEEEEEcCCEEE
Confidence 46799999998763 233 34466777777764 68999999997 67777789999888765
No 134
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=69.62 E-value=17 Score=35.77 Aligned_cols=91 Identities=18% Similarity=0.297 Sum_probs=53.1
Q ss_pred HHHhhcchhcCCcEE--Eecc---------cCCHH-----------HHHHHHHHHHhcCCCceEEEEec-Ch---hhhhc
Q 010211 270 WEDIKFGVDNQVDFY--AVSF---------VKDAK-----------VVHELKDYLKSCNADIHVIVKIE-SA---DSIPN 323 (515)
Q Consensus 270 ~~dI~~al~~gvD~V--alSf---------Vrsa~-----------dv~~vr~~l~~~~~~i~IIaKIE-t~---~aveN 323 (515)
.+.++...+.|+|+| ++|| ++++. ++-++-+-+++.+.+++++.+.. ++ -|+++
T Consensus 35 ~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv~~~g~e~ 114 (267)
T 3vnd_A 35 LKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMPIGLLLYANLVFANGIDE 114 (267)
T ss_dssp HHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCCEEEEECHHHHHHHCHHH
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHhhHHH
Confidence 455555567899985 4556 33322 11121122333335677888765 43 35555
Q ss_pred H-HHHHhh-cCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEE
Q 010211 324 L-HSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIV 370 (515)
Q Consensus 324 l-deIl~~-sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPviv 370 (515)
+ ++..+. +||+++. || ++++ ..+.++.|+++|...+.
T Consensus 115 f~~~~~~aGvdgvii~--Dl----p~ee----~~~~~~~~~~~gl~~i~ 153 (267)
T 3vnd_A 115 FYTKAQAAGVDSVLIA--DV----PVEE----SAPFSKAAKAHGIAPIF 153 (267)
T ss_dssp HHHHHHHHTCCEEEET--TS----CGGG----CHHHHHHHHHTTCEEEC
T ss_pred HHHHHHHcCCCEEEeC--CC----CHhh----HHHHHHHHHHcCCeEEE
Confidence 4 444444 8999994 55 4444 56788899999987653
No 135
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=69.48 E-value=49 Score=31.24 Aligned_cols=145 Identities=17% Similarity=0.115 Sum_probs=84.3
Q ss_pred HHhhcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEe-c------C----hhhhhcHHHHHhh-----cCee
Q 010211 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKI-E------S----ADSIPNLHSIISA-----SDGA 334 (515)
Q Consensus 271 ~dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKI-E------t----~~aveNldeIl~~-----sDgI 334 (515)
+.++++.+.|.|+|-+.+..-.+++.++++.+++.|-.+..+.-- . . .++++.+...++. ++.|
T Consensus 42 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gl~v~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lGa~~v 121 (287)
T 3kws_A 42 EKLDFMEKLGVVGFEPGGGGLAGRVNEIKQALNGRNIKVSAICAGFKGFILSTDPAIRKECMDTMKEIIAAAGELGSTGV 121 (287)
T ss_dssp HHHHHHHHTTCCEEECBSTTCGGGHHHHHHHHTTSSCEECEEECCCCSCTTBSSHHHHHHHHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHcCCCEEEecCCchHHHHHHHHHHHHHcCCeEEEEecCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEE
Confidence 556777889999999887656788999999998776554333210 0 1 1344555555554 5777
Q ss_pred EEcCCcccc--cCC-----CCCHHHHHHHHHHHHHhcCCcEEEEeccccccc---cCCCcChHHHhHHHHHHHhCCcEEe
Q 010211 335 MVARGDLGA--ELP-----IEDVPLLQEDIIRRCRSMQKPVIVATNMLESMI---DHPTPTRAEVSDIAIAVREGADAVM 404 (515)
Q Consensus 335 mIgrgDLg~--elg-----~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi---~~~~PtrAEv~DvanaV~~G~D~vm 404 (515)
.+.+|.-.. ..+ ++.+....+++.+.|.++|..+.+ |.+- .....+-.+..++...+ +.+.+-
T Consensus 122 ~~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~Gv~l~l-----E~~~~~~~~~~~~~~~~~~ll~~v--~~~~vg 194 (287)
T 3kws_A 122 IIVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQHGTSVIF-----EPLNRKECFYLRQVADAASLCRDI--NNPGVR 194 (287)
T ss_dssp EECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHTTCCEEE-----CCCCTTTCSSCCCHHHHHHHHHHH--CCTTEE
T ss_pred EEecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEE-----EecCcccCcccCCHHHHHHHHHHc--CCCCee
Confidence 776552211 111 134566778888899999988776 3221 11233445555555544 233344
Q ss_pred eccccc----CCCCHHHHHHHH
Q 010211 405 LSGETA----HGKFPLKAVKVM 422 (515)
Q Consensus 405 Ls~ETa----~G~yPveaV~~m 422 (515)
+.-+|. .|.-|.+.++.+
T Consensus 195 ~~~D~~h~~~~g~d~~~~l~~~ 216 (287)
T 3kws_A 195 CMGDFWHMTWEETSDMGAFISG 216 (287)
T ss_dssp EEEEHHHHHHHCSCHHHHHHHH
T ss_pred EEeehHHHHhcCCCHHHHHHHh
Confidence 433443 366666665543
No 136
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=69.28 E-value=26 Score=34.72 Aligned_cols=80 Identities=30% Similarity=0.387 Sum_probs=55.3
Q ss_pred cCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeeccccc
Q 010211 331 SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETA 410 (515)
Q Consensus 331 sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ETa 410 (515)
.|.+|.-....|...|+.+ +...+.|.+ ..+.|||+.. +.-|. +|++.++..|+|+|++.+--+
T Consensus 157 ~~aVmPlg~pIGsG~Gi~~-~~lI~~I~e---~~~vPVI~eG---------GI~TP---sDAa~AmeLGAdgVlVgSAI~ 220 (265)
T 1wv2_A 157 CIAVMPLAGLIGSGLGICN-PYNLRIILE---EAKVPVLVDA---------GVGTA---SDAAIAMELGCEAVLMNTAIA 220 (265)
T ss_dssp CSEEEECSSSTTCCCCCSC-HHHHHHHHH---HCSSCBEEES---------CCCSH---HHHHHHHHHTCSEEEESHHHH
T ss_pred CCEEEeCCccCCCCCCcCC-HHHHHHHHh---cCCCCEEEeC---------CCCCH---HHHHHHHHcCCCEEEEChHHh
Confidence 6777773334455556555 455566655 4689999853 44443 367789999999999987667
Q ss_pred CCCCHHHHHHHHHHHH
Q 010211 411 HGKFPLKAVKVMHTVA 426 (515)
Q Consensus 411 ~G~yPveaV~~m~~I~ 426 (515)
.++.|.+-.+.|..-+
T Consensus 221 ~a~dP~~ma~af~~Av 236 (265)
T 1wv2_A 221 HAKDPVMMAEAMKHAI 236 (265)
T ss_dssp TSSSHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHH
Confidence 7889987777776644
No 137
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=69.14 E-value=17 Score=36.44 Aligned_cols=98 Identities=9% Similarity=0.146 Sum_probs=58.4
Q ss_pred HHhhcchhcCCcEEEec------ccCCHHHHHH-HHHHHHhcCCCceEEEEe---cChhhhhcHHHHHhh-cCeeEEcCC
Q 010211 271 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKI---ESADSIPNLHSIISA-SDGAMVARG 339 (515)
Q Consensus 271 ~dI~~al~~gvD~ValS------fVrsa~dv~~-vr~~l~~~~~~i~IIaKI---Et~~aveNldeIl~~-sDgImIgrg 339 (515)
+.++|-++.|+|++.+. +.-+.++-.+ ++..++..+.++.||+-+ -|.++++......+. +|++|+-+-
T Consensus 36 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 115 (318)
T 3qfe_A 36 RYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGVGAHSTRQVLEHINDASVAGANYVLVLPP 115 (318)
T ss_dssp HHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 44567788999998762 1223333333 344445557789999987 456666666665555 899999754
Q ss_pred c-ccccCCCCCHHHHHHHHHHHHHhcCCcEEEE
Q 010211 340 D-LGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (515)
Q Consensus 340 D-Lg~elg~e~v~~aqk~Ii~~c~~aGKPvivA 371 (515)
. ..--. .-..+.+..-..+.+.+.|+++.
T Consensus 116 ~y~~kp~---~~~~l~~~f~~ia~a~~lPiilY 145 (318)
T 3qfe_A 116 AYFGKAT---TPPVIKSFFDDVSCQSPLPVVIY 145 (318)
T ss_dssp CC---CC---CHHHHHHHHHHHHHHCSSCEEEE
T ss_pred cccCCCC---CHHHHHHHHHHHHhhCCCCEEEE
Confidence 3 21111 12233444444455678999985
No 138
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=69.00 E-value=8 Score=41.31 Aligned_cols=50 Identities=20% Similarity=0.384 Sum_probs=42.2
Q ss_pred CeEEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHH
Q 010211 100 KTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKE 149 (515)
Q Consensus 100 ~TKIi~TiGPss~~~e~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~ 149 (515)
+-.+-+.+|...+..+.++.|+++|+++.=||++||..+.+.++++.+|+
T Consensus 219 rL~v~aavG~~~d~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~ 268 (496)
T 4fxs_A 219 RLRVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRA 268 (496)
T ss_dssp CBCCEEECCSSSCCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHH
T ss_pred ceeeeeeeccccchHHHHHHHHhccCceEEeccccccchHHHHHHHHHHH
Confidence 45567788988889999999999999999999999988776666666664
No 139
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=68.88 E-value=89 Score=32.01 Aligned_cols=104 Identities=17% Similarity=0.257 Sum_probs=70.0
Q ss_pred HHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh-cCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEE
Q 010211 293 KVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (515)
Q Consensus 293 ~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivA 371 (515)
++...+++|-++. .+.+++-+=..++++-+ .+. +|.+=||-+|+. .+ .+++++.+.||||++.
T Consensus 91 e~~~~L~~~~~~~--Gi~~~st~~d~~svd~l---~~~~v~~~KI~S~~~~------n~-----~LL~~va~~gkPviLs 154 (349)
T 2wqp_A 91 EDEIKLKEYVESK--GMIFISTLFSRAAALRL---QRMDIPAYKIGSGECN------NY-----PLIKLVASFGKPIILS 154 (349)
T ss_dssp HHHHHHHHHHHHT--TCEEEEEECSHHHHHHH---HHHTCSCEEECGGGTT------CH-----HHHHHHHTTCSCEEEE
T ss_pred HHHHHHHHHHHHh--CCeEEEeeCCHHHHHHH---HhcCCCEEEECccccc------CH-----HHHHHHHhcCCeEEEE
Confidence 4455566666554 46777766666666444 445 799999988773 22 2356667789999997
Q ss_pred eccccccccCCCcChHHHhHHHHHHH-hCCcEEeecccccCCCCHH-------HHHHHHHH
Q 010211 372 TNMLESMIDHPTPTRAEVSDIAIAVR-EGADAVMLSGETAHGKFPL-------KAVKVMHT 424 (515)
Q Consensus 372 TqmLeSMi~~~~PtrAEv~DvanaV~-~G~D~vmLs~ETa~G~yPv-------eaV~~m~~ 424 (515)
| +.-|-.|+...++++. .|.+.++|-. .-.||. .++.+|++
T Consensus 155 t---------Gmat~~Ei~~Ave~i~~~G~~iiLlhc---~s~Yp~~~~~~nL~ai~~lk~ 203 (349)
T 2wqp_A 155 T---------GMNSIESIKKSVEIIREAGVPYALLHC---TNIYPTPYEDVRLGGMNDLSE 203 (349)
T ss_dssp C---------TTCCHHHHHHHHHHHHHHTCCEEEEEC---CCCSSCCGGGCCTHHHHHHHH
T ss_pred C---------CCCCHHHHHHHHHHHHHcCCCEEEEec---cCCCCCChhhcCHHHHHHHHH
Confidence 6 4457889888888887 4668888732 345775 55665554
No 140
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=68.68 E-value=34 Score=33.26 Aligned_cols=132 Identities=19% Similarity=0.229 Sum_probs=76.4
Q ss_pred HHhhcchhcCCcEEEe-----cccCC----HHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh-cCeeEEcCCc
Q 010211 271 EDIKFGVDNQVDFYAV-----SFVKD----AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGD 340 (515)
Q Consensus 271 ~dI~~al~~gvD~Val-----SfVrs----a~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDgImIgrgD 340 (515)
+.++...+.|+|++-+ .||.+ +.-++.+|++.. +..+-+=.||++++.. ++..++. +|.|-+..
T Consensus 44 ~~i~~l~~~G~d~lHvDVmDg~FVpnit~G~~~v~~lr~~~p--~~~ldvHLmv~~p~~~--i~~~~~aGAd~itvH~-- 117 (246)
T 3inp_A 44 DDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGI--TAGMDVHLMVKPVDAL--IESFAKAGATSIVFHP-- 117 (246)
T ss_dssp HHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHHHHTC--CSCEEEEEECSSCHHH--HHHHHHHTCSEEEECG--
T ss_pred HHHHHHHHcCCCEEEEEecCCCcCcchhcCHHHHHHHHHhCC--CCeEEEEEeeCCHHHH--HHHHHHcCCCEEEEcc--
Confidence 4445555678887766 56543 344555555420 1222233578988765 6777776 89999861
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEee-cccccCC-----CC
Q 010211 341 LGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVML-SGETAHG-----KF 414 (515)
Q Consensus 341 Lg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmL-s~ETa~G-----~y 414 (515)
|-. +. ..+.++.++++|+-++++. +..+|- | . ...+.++.|.+++ |-+...| .+
T Consensus 118 ---Ea~-~~----~~~~i~~ir~~G~k~Gval-------np~Tp~--e--~-l~~~l~~vD~VlvMsV~PGfgGQ~fi~~ 177 (246)
T 3inp_A 118 ---EAS-EH----IDRSLQLIKSFGIQAGLAL-------NPATGI--D--C-LKYVESNIDRVLIMSVNPGFGGQKFIPA 177 (246)
T ss_dssp ---GGC-SC----HHHHHHHHHTTTSEEEEEE-------CTTCCS--G--G-GTTTGGGCSEEEEECSCTTC--CCCCTT
T ss_pred ---ccc-hh----HHHHHHHHHHcCCeEEEEe-------cCCCCH--H--H-HHHHHhcCCEEEEeeecCCCCCcccchH
Confidence 211 23 3677788899999999975 323333 2 1 1345567999876 3343333 34
Q ss_pred HHHHHHHHHHHHHH
Q 010211 415 PLKAVKVMHTVALR 428 (515)
Q Consensus 415 PveaV~~m~~I~~~ 428 (515)
.++=++.+++++.+
T Consensus 178 ~l~KI~~lr~~~~~ 191 (246)
T 3inp_A 178 MLDKAKEISKWISS 191 (246)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 45555555555544
No 141
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=68.27 E-value=40 Score=33.96 Aligned_cols=97 Identities=10% Similarity=0.037 Sum_probs=59.6
Q ss_pred HHhhcchhcCCcEEEec------ccCCHHHHHH-HHHHHHhcCCCceEEEEec---ChhhhhcHHHHHhh-cCeeEEcCC
Q 010211 271 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 339 (515)
Q Consensus 271 ~dI~~al~~gvD~ValS------fVrsa~dv~~-vr~~l~~~~~~i~IIaKIE---t~~aveNldeIl~~-sDgImIgrg 339 (515)
+.++|-++.|+|+|.+. +.-+.++-.+ ++..++..+.++.||+-+= |.++++......+. +||+|+.+-
T Consensus 59 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P 138 (332)
T 2r8w_A 59 ALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIGALRTDEAVALAKDAEAAGADALLLAPV 138 (332)
T ss_dssp HHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSSHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 44577788999998762 2233333333 3444555567899999884 47777766666555 899999754
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcCCcEEEE
Q 010211 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (515)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aGKPvivA 371 (515)
...- ..-+.+....+ +.|.+.+.|+++.
T Consensus 139 ~Y~~-~s~~~l~~~f~---~VA~a~~lPiilY 166 (332)
T 2r8w_A 139 SYTP-LTQEEAYHHFA---AVAGATALPLAIY 166 (332)
T ss_dssp CSSC-CCHHHHHHHHH---HHHHHCSSCEEEE
T ss_pred CCCC-CCHHHHHHHHH---HHHHhcCCCEEEE
Confidence 4321 11133333334 4455668999884
No 142
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=68.21 E-value=28 Score=31.97 Aligned_cols=103 Identities=12% Similarity=0.153 Sum_probs=61.5
Q ss_pred HHhhcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEE-EEecChhhhhcHHHHHhh-cCeeEEcCCcccccCCCC
Q 010211 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVI-VKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIE 348 (515)
Q Consensus 271 ~dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~II-aKIEt~~aveNldeIl~~-sDgImIgrgDLg~elg~e 348 (515)
+.++...+.|+|+|-+-. .++..+..++++.+..+.++.|= ..+.+. +.++..++. +|+|.++--
T Consensus 23 ~~~~~~~~~G~~~i~l~~-~~~~~~~~i~~i~~~~~~~l~vg~g~~~~~---~~i~~a~~~Gad~V~~~~~--------- 89 (212)
T 2v82_A 23 AHVGAVIDAGFDAVEIPL-NSPQWEQSIPAIVDAYGDKALIGAGTVLKP---EQVDALARMGCQLIVTPNI--------- 89 (212)
T ss_dssp HHHHHHHHHTCCEEEEET-TSTTHHHHHHHHHHHHTTTSEEEEECCCSH---HHHHHHHHTTCCEEECSSC---------
T ss_pred HHHHHHHHCCCCEEEEeC-CChhHHHHHHHHHHhCCCCeEEEeccccCH---HHHHHHHHcCCCEEEeCCC---------
Confidence 334556678999987753 44555566666554434333330 233333 356666666 899975421
Q ss_pred CHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEee
Q 010211 349 DVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVML 405 (515)
Q Consensus 349 ~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmL 405 (515)
. ..+++.+++.|.++++.+ .|..|+ ..+...|+|.+.+
T Consensus 90 ~-----~~~~~~~~~~g~~~~~g~-----------~t~~e~---~~a~~~G~d~v~v 127 (212)
T 2v82_A 90 H-----SEVIRRAVGYGMTVCPGC-----------ATATEA---FTALEAGAQALKI 127 (212)
T ss_dssp C-----HHHHHHHHHTTCEEECEE-----------CSHHHH---HHHHHTTCSEEEE
T ss_pred C-----HHHHHHHHHcCCCEEeec-----------CCHHHH---HHHHHCCCCEEEE
Confidence 1 345778899999876531 233343 4667889999987
No 143
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=68.16 E-value=23 Score=35.16 Aligned_cols=97 Identities=18% Similarity=0.158 Sum_probs=59.9
Q ss_pred HHhhcchhcCCcEEEec------ccCCHHHHHH-HHHHHHhcCCCceEEEEec---ChhhhhcHHHHHhh-cCeeEEcCC
Q 010211 271 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 339 (515)
Q Consensus 271 ~dI~~al~~gvD~ValS------fVrsa~dv~~-vr~~l~~~~~~i~IIaKIE---t~~aveNldeIl~~-sDgImIgrg 339 (515)
+.++|-++.|+|++.+. +.-+.++-.+ ++..++..+.++.||+-+= |.++++......+. +|++|+-+-
T Consensus 36 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 115 (303)
T 2wkj_A 36 RLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTP 115 (303)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhCCCCEEEecCC
Confidence 44577788999998762 2333433333 3444555567899999884 47777766666555 899998654
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcC-CcEEEE
Q 010211 340 DLGAELPIEDVPLLQEDIIRRCRSMQ-KPVIVA 371 (515)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aG-KPvivA 371 (515)
...- .+-+.+....+.| |.+.+ .|+++.
T Consensus 116 ~y~~-~s~~~l~~~f~~v---a~a~~~lPiilY 144 (303)
T 2wkj_A 116 FYYP-FSFEEHCDHYRAI---IDSADGLPMVVY 144 (303)
T ss_dssp CSSC-CCHHHHHHHHHHH---HHHHTTCCEEEE
T ss_pred CCCC-CCHHHHHHHHHHH---HHhCCCCCEEEE
Confidence 3311 1223444444555 44556 999984
No 144
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=68.15 E-value=22 Score=33.20 Aligned_cols=126 Identities=13% Similarity=0.122 Sum_probs=65.0
Q ss_pred HHHhhcchhcCCcEEEecc--cCCHHHHHHHHHHHHhcCCCceEE--EE-------ecCh-------hhhhcHHHHHhh-
Q 010211 270 WEDIKFGVDNQVDFYAVSF--VKDAKVVHELKDYLKSCNADIHVI--VK-------IESA-------DSIPNLHSIISA- 330 (515)
Q Consensus 270 ~~dI~~al~~gvD~ValSf--Vrsa~dv~~vr~~l~~~~~~i~II--aK-------IEt~-------~aveNldeIl~~- 330 (515)
.++++.+++.|+|.|.+.. ..+++. +.+.++..+..+.+- ++ +++. ..++.++...+.
T Consensus 86 ~~~~~~~l~~Gad~V~lg~~~l~~p~~---~~~~~~~~g~~~~~~ld~~~~~~~~~v~~~g~~~~~~~~~e~~~~~~~~G 162 (244)
T 2y88_A 86 DESLAAALATGCARVNVGTAALENPQW---CARVIGEHGDQVAVGLDVQIIDGEHRLRGRGWETDGGDLWDVLERLDSEG 162 (244)
T ss_dssp HHHHHHHHHTTCSEEEECHHHHHCHHH---HHHHHHHHGGGEEEEEEEEEETTEEEEEEGGGTEEEEEHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCEEEECchHhhChHH---HHHHHHHcCCCEEEEEeccccCCCCEEEECCccCCCCCHHHHHHHHHhCC
Confidence 3457777788999988753 133333 344444334332211 12 2222 224445555555
Q ss_pred cCeeEEcCCcccccC-CCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHh---CCcEEeec
Q 010211 331 SDGAMVARGDLGAEL-PIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVRE---GADAVMLS 406 (515)
Q Consensus 331 sDgImIgrgDLg~el-g~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~---G~D~vmLs 406 (515)
+|.|++-..+..-.. |+ .+ ...+++. +..+.|++. ..+.-+.. |+..+... |+|++|+.
T Consensus 163 ~~~i~~~~~~~~~~~~g~-~~-~~~~~l~---~~~~ipvia---------~GGI~~~~---d~~~~~~~~~~Gad~v~vG 225 (244)
T 2y88_A 163 CSRFVVTDITKDGTLGGP-NL-DLLAGVA---DRTDAPVIA---------SGGVSSLD---DLRAIATLTHRGVEGAIVG 225 (244)
T ss_dssp CCCEEEEETTTTTTTSCC-CH-HHHHHHH---TTCSSCEEE---------ESCCCSHH---HHHHHHTTGGGTEEEEEEC
T ss_pred CCEEEEEecCCccccCCC-CH-HHHHHHH---HhCCCCEEE---------ECCCCCHH---HHHHHHhhccCCCCEEEEc
Confidence 788887544432221 22 22 2223332 345889887 34444433 44455555 99999986
Q ss_pred ccccCCCCH
Q 010211 407 GETAHGKFP 415 (515)
Q Consensus 407 ~ETa~G~yP 415 (515)
.---.+.+.
T Consensus 226 ~al~~~~~~ 234 (244)
T 2y88_A 226 KALYARRFT 234 (244)
T ss_dssp HHHHTTSSC
T ss_pred HHHHCCCcC
Confidence 433344443
No 145
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=67.92 E-value=29 Score=34.68 Aligned_cols=97 Identities=9% Similarity=0.127 Sum_probs=59.8
Q ss_pred HHhhcchhcCCcEEEec------ccCCHHHHHH-HHHHHHhcCCCceEEEEec---ChhhhhcHHHHHhh-cCeeEEcCC
Q 010211 271 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 339 (515)
Q Consensus 271 ~dI~~al~~gvD~ValS------fVrsa~dv~~-vr~~l~~~~~~i~IIaKIE---t~~aveNldeIl~~-sDgImIgrg 339 (515)
+.++|-++.|+|++.+. +.-+.++-.+ ++..++..+.++.||+-+= |.++++......+. +|++|+-+-
T Consensus 48 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P 127 (314)
T 3qze_A 48 KLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGADACLLVTP 127 (314)
T ss_dssp HHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 44567788999998762 2223333333 3344555677899999874 56777766666655 899999754
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcCCcEEEE
Q 010211 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (515)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aGKPvivA 371 (515)
...- +.-..+.+..-+.|.+.+.|+++.
T Consensus 128 ~y~~----~s~~~l~~~f~~va~a~~lPiilY 155 (314)
T 3qze_A 128 YYNK----PTQEGMYQHFRHIAEAVAIPQILY 155 (314)
T ss_dssp CSSC----CCHHHHHHHHHHHHHHSCSCEEEE
T ss_pred CCCC----CCHHHHHHHHHHHHHhcCCCEEEE
Confidence 3321 122333344444455669999985
No 146
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=67.78 E-value=30 Score=34.07 Aligned_cols=122 Identities=20% Similarity=0.205 Sum_probs=68.1
Q ss_pred HHhhcchhcCCcEE-Eec-------------ccCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh-cCeeE
Q 010211 271 EDIKFGVDNQVDFY-AVS-------------FVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAM 335 (515)
Q Consensus 271 ~dI~~al~~gvD~V-alS-------------fVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDgIm 335 (515)
+.++...+.|+|+| .+- ..++.+.+.++++. -+++++.|+=.-. ++..+...+. +|+|.
T Consensus 32 ~~a~~~~~~Ga~~I~~l~p~~~~~~~~~G~~~~~~~~~i~~I~~~-----~~iPv~~k~r~g~-~~~~~~~~a~GAd~V~ 105 (305)
T 2nv1_A 32 EQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNA-----VSIPVMAKARIGH-IVEARVLEAMGVDYID 105 (305)
T ss_dssp HHHHHHHHTTCSEEEECCC-------CCCCCCCCCHHHHHHHHHH-----CSSCEEEEECTTC-HHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHcCCCEEEEcCCCcchhhhccCcccCCCHHHHHHHHHh-----CCCCEEecccccc-hHHHHHHHHCCCCEEE
Confidence 34455667899988 331 12245555555432 2567777764311 2333444444 89996
Q ss_pred EcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecccccCCCCH
Q 010211 336 VARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFP 415 (515)
Q Consensus 336 IgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ETa~G~yP 415 (515)
+..+|.. +++ .+.++ ++..|.++++.+ .+. .+...++..|+|.+.++||+..| -.
T Consensus 106 -~~~~l~~----~~~----~~~i~-~~~~g~~v~~~~-----------~~~---~e~~~a~~~Gad~V~~~G~~g~g-~~ 160 (305)
T 2nv1_A 106 -ESEVLTP----ADE----EFHLN-KNEYTVPFVCGC-----------RDL---GEATRRIAEGASMLRTKGEPGTG-NI 160 (305)
T ss_dssp -ECTTSCC----SCS----SCCCC-GGGCSSCEEEEE-----------SSH---HHHHHHHHTTCSEEEECCCTTSC-CT
T ss_pred -EeccCCH----HHH----HHHHH-HhccCCcEEEEe-----------CCH---HHHHHHHHCCCCEEEeccccCcc-ch
Confidence 4444422 221 12233 557799988754 122 23456678899999999887656 33
Q ss_pred HHHHHHHH
Q 010211 416 LKAVKVMH 423 (515)
Q Consensus 416 veaV~~m~ 423 (515)
.+++...+
T Consensus 161 ~~~~~h~r 168 (305)
T 2nv1_A 161 VEAVRHMR 168 (305)
T ss_dssp HHHHHHHH
T ss_pred HHHHhhhh
Confidence 45544443
No 147
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=67.77 E-value=32 Score=34.08 Aligned_cols=97 Identities=13% Similarity=0.146 Sum_probs=59.5
Q ss_pred HHhhcchhcCCcEEEec------ccCCHHHHHH-HHHHHHhcCC-CceEEEEec---ChhhhhcHHHHHhh-cCeeEEcC
Q 010211 271 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNA-DIHVIVKIE---SADSIPNLHSIISA-SDGAMVAR 338 (515)
Q Consensus 271 ~dI~~al~~gvD~ValS------fVrsa~dv~~-vr~~l~~~~~-~i~IIaKIE---t~~aveNldeIl~~-sDgImIgr 338 (515)
+.++|-++.|+|++.+. +.-+.++-.+ ++..++..+. ++.||+-+= |.++++......+. +|++|+-+
T Consensus 32 ~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 111 (301)
T 3m5v_A 32 RLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHGADGILSVA 111 (301)
T ss_dssp HHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 44567788999998762 1223333333 3444555567 899999874 56666666665555 89999975
Q ss_pred CcccccCCCCCHHHHHHHHHHHHHhcCCcEEEE
Q 010211 339 GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (515)
Q Consensus 339 gDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivA 371 (515)
-...- +.-..+.+..-+.|.+.+.|+++.
T Consensus 112 P~y~~----~s~~~l~~~f~~va~a~~lPiilY 140 (301)
T 3m5v_A 112 PYYNK----PTQQGLYEHYKAIAQSVDIPVLLY 140 (301)
T ss_dssp CCSSC----CCHHHHHHHHHHHHHHCSSCEEEE
T ss_pred CCCCC----CCHHHHHHHHHHHHHhCCCCEEEE
Confidence 44321 222334444444556669999985
No 148
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=67.58 E-value=53 Score=31.02 Aligned_cols=138 Identities=9% Similarity=-0.020 Sum_probs=78.7
Q ss_pred chhcCCcEEEecccCCHHHHHHHHHHHHhcCCC-ceEEEEecChhhhhcHHHHHhh-cCeeEEcCCcccccCCCCCHHHH
Q 010211 276 GVDNQVDFYAVSFVKDAKVVHELKDYLKSCNAD-IHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIEDVPLL 353 (515)
Q Consensus 276 al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~-i~IIaKIEt~~aveNldeIl~~-sDgImIgrgDLg~elg~e~v~~a 353 (515)
+.+.|+|++.+-.....+.+..+++.+++.|.. ..+.+-+=|-...+.+.++++. .|-+.+.++-++..-|.-.-+.-
T Consensus 78 ~~~~Gad~vtVH~~~g~~~l~~a~~~~~~~g~~~~~~~Vt~lts~~~~~~~~~~~~~~~~~v~~~a~~~~~~Gvv~s~~e 157 (221)
T 3exr_A 78 NAVRGADWMTCICSATIPTMKAARKAIEDINPDKGEIQVELYGDWTYDQAQQWLDAGISQAIYHQSRDALLAGETWGEKD 157 (221)
T ss_dssp HHTTTCSEEEEETTSCHHHHHHHHHHHHHHCTTTCEEEEECCSSCCHHHHHHHHHTTCCEEEEECCHHHHHHTCCCCHHH
T ss_pred HHHcCCCEEEEeccCCHHHHHHHHHHHHhcCCCcceEEEEEcCCCCHHHHHHHHcCCHHHHHHHHHHhcCCCccccCHHH
Confidence 357899998886544555577788888766632 2232222222245666777764 66667766666554343111222
Q ss_pred HHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecccccCCCCHHHHHHHHHHHHH
Q 010211 354 QEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVAL 427 (515)
Q Consensus 354 qk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~ 427 (515)
.+.+-+.+ ..+.++.+. -.-+|... ..++..|+|.+..-.--....-|.++++.+.+...
T Consensus 158 ~~~ir~~~-~~~~~i~v~--------gGI~~~~~-----~~~~~aGad~~VvG~~I~~a~dp~~a~~~~~~~~~ 217 (221)
T 3exr_A 158 LNKVKKLI-EMGFRVSVT--------GGLSVDTL-----KLFEGVDVFTFIAGRGITEAKNPAGAARAFKDEIK 217 (221)
T ss_dssp HHHHHHHH-HHTCEEEEE--------SSCCGGGG-----GGGTTCCCSEEEECHHHHTSSSHHHHHHHHHHHHH
T ss_pred HHHHHHhh-cCCceEEEE--------CCCCHHHH-----HHHHHCCCCEEEECchhhCCCCHHHHHHHHHHHHH
Confidence 22332233 334554442 23344322 25678899998886544455679999888876554
No 149
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=67.47 E-value=64 Score=29.31 Aligned_cols=113 Identities=17% Similarity=0.156 Sum_probs=63.7
Q ss_pred HHHhhcchhcCCcEEEec--c--cCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhc-HHHHHhh-cCeeEEcCCcccc
Q 010211 270 WEDIKFGVDNQVDFYAVS--F--VKDAKVVHELKDYLKSCNADIHVIVKIESADSIPN-LHSIISA-SDGAMVARGDLGA 343 (515)
Q Consensus 270 ~~dI~~al~~gvD~ValS--f--Vrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveN-ldeIl~~-sDgImIgrgDLg~ 343 (515)
.+.++.. ..|+|+|-+. | -...+.++++|+. ..+..+.+-.=...+.+. +++..+. +|++.+. ++.
T Consensus 16 ~~~~~~~-~~~~diie~G~p~~~~~g~~~i~~ir~~----~~~~~i~~~~~~~~~~~~~~~~~~~~Gad~v~v~--~~~- 87 (211)
T 3f4w_A 16 MVFMDKV-VDDVDIIEVGTPFLIREGVNAIKAIKEK----YPHKEVLADAKIMDGGHFESQLLFDAGADYVTVL--GVT- 87 (211)
T ss_dssp HHHHHHH-GGGCSEEEECHHHHHHHTTHHHHHHHHH----CTTSEEEEEEEECSCHHHHHHHHHHTTCSEEEEE--TTS-
T ss_pred HHHHHHh-hcCccEEEeCcHHHHhccHHHHHHHHHh----CCCCEEEEEEEeccchHHHHHHHHhcCCCEEEEe--CCC-
Confidence 3444433 3589987654 3 1223334444432 234555543322234455 6666666 8999994 322
Q ss_pred cCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeec
Q 010211 344 ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (515)
Q Consensus 344 elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs 406 (515)
.....+++++.|+++|+++++.. .++ .|. ...+..+...|+|.+.+.
T Consensus 88 ------~~~~~~~~~~~~~~~g~~~~v~~-------~~~-~t~--~~~~~~~~~~g~d~i~v~ 134 (211)
T 3f4w_A 88 ------DVLTIQSCIRAAKEAGKQVVVDM-------ICV-DDL--PARVRLLEEAGADMLAVH 134 (211)
T ss_dssp ------CHHHHHHHHHHHHHHTCEEEEEC-------TTC-SSH--HHHHHHHHHHTCCEEEEE
T ss_pred ------ChhHHHHHHHHHHHcCCeEEEEe-------cCC-CCH--HHHHHHHHHcCCCEEEEc
Confidence 12445788999999999998731 111 122 223456778899998764
No 150
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=67.45 E-value=1e+02 Score=31.01 Aligned_cols=149 Identities=11% Similarity=0.034 Sum_probs=87.9
Q ss_pred CCHhhHHHhh-cchhcCCcEEEec-----ccCC-------HHHHHHHHHHHHhcCCCceEEEEe-cChhhhhcHHHHHhh
Q 010211 265 ITDKDWEDIK-FGVDNQVDFYAVS-----FVKD-------AKVVHELKDYLKSCNADIHVIVKI-ESADSIPNLHSIISA 330 (515)
Q Consensus 265 ltekD~~dI~-~al~~gvD~ValS-----fVrs-------a~dv~~vr~~l~~~~~~i~IIaKI-Et~~aveNldeIl~~ 330 (515)
++..|+..|. .-.+.|+|.|=+. +..+ +.+...++...+ ...++.+.+.. -+..-.+.++..++.
T Consensus 27 ~~~e~k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e~l~~i~~-~~~~~~i~~l~~p~~~~~~~i~~a~~a 105 (345)
T 1nvm_A 27 YTLDDVRAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAG-EISHAQIATLLLPGIGSVHDLKNAYQA 105 (345)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHHHHHHHHT-TCSSSEEEEEECBTTBCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHHHHHHHHh-hCCCCEEEEEecCCcccHHHHHHHHhC
Confidence 4667775554 4456799999883 3222 334445555543 33466666662 211123445555555
Q ss_pred -cCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHH-HHHhCCcEEeeccc
Q 010211 331 -SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAI-AVREGADAVMLSGE 408 (515)
Q Consensus 331 -sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~Dvan-aV~~G~D~vmLs~E 408 (515)
+|++.|. + +..++ ...+..++.|+++|+.+...- ++ .+.-+...+.+++. +...|+|.+-|. +
T Consensus 106 Gvd~v~I~---~----~~s~~-~~~~~~i~~ak~~G~~v~~~~----~~--a~~~~~e~~~~ia~~~~~~Ga~~i~l~-D 170 (345)
T 1nvm_A 106 GARVVRVA---T----HCTEA-DVSKQHIEYARNLGMDTVGFL----MM--SHMIPAEKLAEQGKLMESYGATCIYMA-D 170 (345)
T ss_dssp TCCEEEEE---E----ETTCG-GGGHHHHHHHHHHTCEEEEEE----ES--TTSSCHHHHHHHHHHHHHHTCSEEEEE-C
T ss_pred CcCEEEEE---E----eccHH-HHHHHHHHHHHHCCCEEEEEE----Ee--CCCCCHHHHHHHHHHHHHCCCCEEEEC-C
Confidence 7988874 2 22222 245778889999999987642 11 22223344555544 445679999986 5
Q ss_pred ccCCCCHHHHHHHHHHHHHHH
Q 010211 409 TAHGKFPLKAVKVMHTVALRT 429 (515)
Q Consensus 409 Ta~G~yPveaV~~m~~I~~~a 429 (515)
|.=...|-+.-+.+..+.+..
T Consensus 171 T~G~~~P~~v~~lv~~l~~~~ 191 (345)
T 1nvm_A 171 SGGAMSMNDIRDRMRAFKAVL 191 (345)
T ss_dssp TTCCCCHHHHHHHHHHHHHHS
T ss_pred CcCccCHHHHHHHHHHHHHhc
Confidence 554446988888888887765
No 151
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=67.36 E-value=59 Score=33.11 Aligned_cols=60 Identities=17% Similarity=0.088 Sum_probs=32.4
Q ss_pred cCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhC-CcEEeeccc
Q 010211 331 SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREG-ADAVMLSGE 408 (515)
Q Consensus 331 sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G-~D~vmLs~E 408 (515)
+|.|-+..+.....-+ ..+ . .+-+..+..++||+... .. +.. +...++..| +|+|++..-
T Consensus 265 ~d~i~v~~~~~~~~~~-~~~-~---~~~~v~~~~~iPvi~~G---------gi-t~~---~a~~~l~~g~aD~V~~gR~ 325 (364)
T 1vyr_A 265 IAYLHMSETDLAGGKP-YSE-A---FRQKVRERFHGVIIGAG---------AY-TAE---KAEDLIGKGLIDAVAFGRD 325 (364)
T ss_dssp CSEEEEECCBTTBCCC-CCH-H---HHHHHHHHCCSEEEEES---------SC-CHH---HHHHHHHTTSCSEEEESHH
T ss_pred CCEEEEecCcccCCCc-ccH-H---HHHHHHHHCCCCEEEEC---------Cc-CHH---HHHHHHHCCCccEEEECHH
Confidence 6888886543211111 111 1 12223345678988743 22 322 344778888 999998643
No 152
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=66.90 E-value=28 Score=34.81 Aligned_cols=97 Identities=15% Similarity=0.079 Sum_probs=59.5
Q ss_pred HHhhcchhcCCcEEEec------ccCCHHHHHH-HHHHHHhcCCCceEEEEec---ChhhhhcHHHHHhh-cCeeEEcCC
Q 010211 271 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 339 (515)
Q Consensus 271 ~dI~~al~~gvD~ValS------fVrsa~dv~~-vr~~l~~~~~~i~IIaKIE---t~~aveNldeIl~~-sDgImIgrg 339 (515)
+.++|-++.|+|++.+. +.-+.++-.+ ++..++..+.++.||+-+= |.++++......+. +|++|+-+-
T Consensus 49 ~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 128 (315)
T 3na8_A 49 RSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMVLPI 128 (315)
T ss_dssp HHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 44467788999998752 1223333333 3344455577899999884 56667666666555 899999754
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcCCcEEEE
Q 010211 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (515)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aGKPvivA 371 (515)
...- +.-..+.+..-+.+.+.+.|+++.
T Consensus 129 ~y~~----~s~~~l~~~f~~va~a~~lPiilY 156 (315)
T 3na8_A 129 SYWK----LNEAEVFQHYRAVGEAIGVPVMLY 156 (315)
T ss_dssp CSSC----CCHHHHHHHHHHHHHHCSSCEEEE
T ss_pred CCCC----CCHHHHHHHHHHHHHhCCCcEEEE
Confidence 4321 122334444444456668999984
No 153
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=66.83 E-value=36 Score=33.61 Aligned_cols=97 Identities=11% Similarity=0.102 Sum_probs=59.0
Q ss_pred HHhhcchhcCCcEEEec------ccCCHHHHHH-HHHHHHhcCCCceEEEEec---ChhhhhcHHHHHhh-cCeeEEcCC
Q 010211 271 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 339 (515)
Q Consensus 271 ~dI~~al~~gvD~ValS------fVrsa~dv~~-vr~~l~~~~~~i~IIaKIE---t~~aveNldeIl~~-sDgImIgrg 339 (515)
+.++|-++.|+|++.+. +.-+.++-.+ ++..++..+.++.||+-+= |.++++......+. +|++|+-+-
T Consensus 32 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 111 (297)
T 3flu_A 32 DLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLSVVP 111 (297)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 44567788999998762 1112333333 3344455567899999874 56666666665555 899998754
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcCCcEEEE
Q 010211 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (515)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aGKPvivA 371 (515)
...- +.-..+.+..-+.+.+.+.|+++.
T Consensus 112 ~y~~----~~~~~l~~~f~~va~a~~lPiilY 139 (297)
T 3flu_A 112 YYNK----PSQEGIYQHFKTIAEATSIPMIIY 139 (297)
T ss_dssp CSSC----CCHHHHHHHHHHHHHHCCSCEEEE
T ss_pred CCCC----CCHHHHHHHHHHHHHhCCCCEEEE
Confidence 3321 122334444444556669999985
No 154
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=66.78 E-value=48 Score=32.57 Aligned_cols=97 Identities=20% Similarity=0.183 Sum_probs=59.9
Q ss_pred HHhhcchhcCCcEEEec------ccCCHHHHHH-HHHHHHhcCCCceEEEEec---ChhhhhcHHHHHhh-cCeeEEcCC
Q 010211 271 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 339 (515)
Q Consensus 271 ~dI~~al~~gvD~ValS------fVrsa~dv~~-vr~~l~~~~~~i~IIaKIE---t~~aveNldeIl~~-sDgImIgrg 339 (515)
+.++|-++.|+|++.+. +.-+.++-.+ ++...+..+.+++||+-+= |.++++....-.+. +|++|+-+-
T Consensus 25 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 104 (294)
T 2ehh_A 25 NLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEVGADGALVVVP 104 (294)
T ss_dssp HHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 45577788999998762 2233333333 3444555567899999884 46677766665555 899998754
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcCCcEEEE
Q 010211 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (515)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aGKPvivA 371 (515)
...- +.-..+.+..-+.|.+.+.|+++.
T Consensus 105 ~y~~----~s~~~l~~~f~~va~a~~lPiilY 132 (294)
T 2ehh_A 105 YYNK----PTQRGLYEHFKTVAQEVDIPIIIY 132 (294)
T ss_dssp CSSC----CCHHHHHHHHHHHHHHCCSCEEEE
T ss_pred CCCC----CCHHHHHHHHHHHHHhcCCCEEEE
Confidence 3311 222333444444466678999884
No 155
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=66.57 E-value=29 Score=34.57 Aligned_cols=133 Identities=12% Similarity=0.097 Sum_probs=78.2
Q ss_pred CCCCCHhhHHHhhcchhcCCcEEEeccc-------------CCHHHHHHHHHHHHhcCCCceEEEEecCh------hhhh
Q 010211 262 LPSITDKDWEDIKFGVDNQVDFYAVSFV-------------KDAKVVHELKDYLKSCNADIHVIVKIESA------DSIP 322 (515)
Q Consensus 262 lp~ltekD~~dI~~al~~gvD~ValSfV-------------rsa~dv~~vr~~l~~~~~~i~IIaKIEt~------~ave 322 (515)
+..+|-+|.--.+.+-+.|+|.|.++.- -+-+++..--..+.+..++.+|++=+|+- ++++
T Consensus 31 i~m~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vtldem~~h~~aV~r~~~~~~vvaD~pfgsY~s~~~a~~ 110 (275)
T 3vav_A 31 IAMLTCYDASFAALLDRANVDVQLIGDSLGNVLQGQTTTLPVTLDDIAYHTACVARAQPRALIVADLPFGTYGTPADAFA 110 (275)
T ss_dssp EEEEECCSHHHHHHHHHTTCSEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHTCCSSEEEEECCTTSCSSHHHHHH
T ss_pred EEEEeCcCHHHHHHHHHcCCCEEEECcHHHHHHcCCCCCCccCHHHHHHHHHHHHhcCCCCCEEEecCCCCCCCHHHHHH
Confidence 3445667776566666789999977521 11222222223344445578999999983 5677
Q ss_pred cHHHHHhh-cCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEec----c---ccccccCCC-cChHH--HhH
Q 010211 323 NLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATN----M---LESMIDHPT-PTRAE--VSD 391 (515)
Q Consensus 323 NldeIl~~-sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATq----m---LeSMi~~~~-PtrAE--v~D 391 (515)
|...+++. +++|-+-=| . .+...|++..++|+||.-... - +......++ ..+++ +.|
T Consensus 111 ~a~rl~kaGa~aVklEdg--------~----~~~~~i~~l~~~GIpv~gHlgltPq~~~~~gg~~vqgrt~~~a~~~i~r 178 (275)
T 3vav_A 111 SAVKLMRAGAQMVKFEGG--------E----WLAETVRFLVERAVPVCAHVGLTPQSVHAFGGFKVQGKTEAGAAQLLRD 178 (275)
T ss_dssp HHHHHHHTTCSEEEEECC--------G----GGHHHHHHHHHTTCCEEEEEESCGGGHHHHC---CCCCSHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEECCc--------h----hHHHHHHHHHHCCCCEEEecCCCceEEeccCCeEEEcCCHHHHHHHHHH
Confidence 77777776 888887533 1 234455666789999974321 1 111111222 12233 666
Q ss_pred HHHHHHhCCcEEeec
Q 010211 392 IAIAVREGADAVMLS 406 (515)
Q Consensus 392 vanaV~~G~D~vmLs 406 (515)
.-.+...|+|+++|=
T Consensus 179 A~a~~eAGA~~ivlE 193 (275)
T 3vav_A 179 ARAVEEAGAQLIVLE 193 (275)
T ss_dssp HHHHHHHTCSEEEEE
T ss_pred HHHHHHcCCCEEEec
Confidence 667777899998883
No 156
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=66.48 E-value=18 Score=35.55 Aligned_cols=108 Identities=18% Similarity=0.229 Sum_probs=67.2
Q ss_pred hHHHhhc-chhcCCcEEEec-----ccCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhc---HHHHHhh-cCeeEEcC
Q 010211 269 DWEDIKF-GVDNQVDFYAVS-----FVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPN---LHSIISA-SDGAMVAR 338 (515)
Q Consensus 269 D~~dI~~-al~~gvD~ValS-----fVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveN---ldeIl~~-sDgImIgr 338 (515)
|...+.. ..+.|+++|.+- |-.+.+++..+++.. +++|+.| +.+-+ +++-.+. +|+|.++-
T Consensus 73 ~p~~~A~~y~~~GA~~isvltd~~~f~Gs~~~l~~ir~~v-----~lPvl~k----dfiid~~qv~~A~~~GAD~VlLi~ 143 (272)
T 3qja_A 73 DPAKLAQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRASV-----SIPVLRK----DFVVQPYQIHEARAHGADMLLLIV 143 (272)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCGGGHHHHHHHHHHHHHHC-----SSCEEEE----SCCCSHHHHHHHHHTTCSEEEEEG
T ss_pred CHHHHHHHHHHcCCCEEEEecChhhcCCCHHHHHHHHHhC-----CCCEEEC----ccccCHHHHHHHHHcCCCEEEEec
Confidence 4444433 345799988652 222455666665543 4677765 23333 3444444 89999987
Q ss_pred CcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecc
Q 010211 339 GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 407 (515)
Q Consensus 339 gDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ 407 (515)
.||. +.-.+++++.|++.|..+++.+ -+..|+ ..+...|+|.+-.++
T Consensus 144 a~l~--------~~~l~~l~~~a~~lGl~~lvev-----------~t~ee~---~~A~~~Gad~IGv~~ 190 (272)
T 3qja_A 144 AALE--------QSVLVSMLDRTESLGMTALVEV-----------HTEQEA---DRALKAGAKVIGVNA 190 (272)
T ss_dssp GGSC--------HHHHHHHHHHHHHTTCEEEEEE-----------SSHHHH---HHHHHHTCSEEEEES
T ss_pred ccCC--------HHHHHHHHHHHHHCCCcEEEEc-----------CCHHHH---HHHHHCCCCEEEECC
Confidence 7774 2346778899999999988743 123343 355677999998875
No 157
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=66.44 E-value=73 Score=33.48 Aligned_cols=118 Identities=23% Similarity=0.239 Sum_probs=70.7
Q ss_pred HHHhhcchhcCCcEEEeccc--CCHHHHHHHHHHHHhcCCCceEEE-EecChhhhhcHHHHHhhcCeeEEcCCccc----
Q 010211 270 WEDIKFGVDNQVDFYAVSFV--KDAKVVHELKDYLKSCNADIHVIV-KIESADSIPNLHSIISASDGAMVARGDLG---- 342 (515)
Q Consensus 270 ~~dI~~al~~gvD~ValSfV--rsa~dv~~vr~~l~~~~~~i~IIa-KIEt~~aveNldeIl~~sDgImIgrgDLg---- 342 (515)
.+.+.+..+.|+|.+.+.-. .+..-+..++. +...- ++.+++ .|-++++...+. -+|+|.+|.|-=+
T Consensus 230 ~~~a~~l~~~gvd~lvvdta~G~~~~~L~~I~~-l~~~~-~vpvi~k~v~~~~~a~~l~----G~d~v~vg~g~g~~~~~ 303 (486)
T 2cu0_A 230 IKRAIELDKAGVDVIVVDTAHAHNLKAIKSMKE-MRQKV-DADFIVGNIANPKAVDDLT----FADAVKVGIGPGSICTT 303 (486)
T ss_dssp HHHHHHHHHTTCSEEEEECSCCCCHHHHHHHHH-HHHTC-CSEEEEEEECCHHHHTTCT----TSSEEEECSSCSTTBCH
T ss_pred HHHHHHHHHhcCCceEEEecCCcEeehhhHHHH-HHHHh-CCccccCCcCCHHHHHHhh----CCCeEEEeeeeccceee
Confidence 45566677889997755421 22233333333 33322 567777 577777665444 6899998543211
Q ss_pred ---ccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeec
Q 010211 343 ---AELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (515)
Q Consensus 343 ---~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs 406 (515)
...|.+. ......+.+.+.+.+.|||.+. +.-+ -.|++.++..|+|++|+.
T Consensus 304 r~~~~~g~~~-~~~l~~~~~~~~~~~vpVia~G---------Gi~~---~~di~kalalGA~~v~~g 357 (486)
T 2cu0_A 304 RIVAGVGVPQ-ITAVAMVADRAQEYGLYVIADG---------GIRY---SGDIVKAIAAGADAVMLG 357 (486)
T ss_dssp HHHTCCCCCH-HHHHHHHHHHHHHHTCEEEEES---------CCCS---HHHHHHHHHTTCSEEEES
T ss_pred eEEeecCcch-HHHHHHHHHHHHHcCCcEEecC---------CCCC---HHHHHHHHHcCCCceeeC
Confidence 1123332 3445555666667789998743 3333 347889999999999975
No 158
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=66.38 E-value=25 Score=33.53 Aligned_cols=129 Identities=10% Similarity=0.038 Sum_probs=69.4
Q ss_pred hcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHH----HHHhh-----cCeeEEcCCccccc
Q 010211 274 KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLH----SIISA-----SDGAMVARGDLGAE 344 (515)
Q Consensus 274 ~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNld----eIl~~-----sDgImIgrgDLg~e 344 (515)
+...+.|+|++.+.-.-..+-+..+.+++++.+..+.+++..-++.+.+.++ .++.. .||+.++.
T Consensus 85 ~~~~~~gad~vtvh~~~G~~~l~~~~~~~~~~g~~v~vLt~~s~~~~~~~~~~~~~~~a~~a~~~G~~GvV~~a------ 158 (228)
T 3m47_A 85 RATFKAGADAIIVHGFPGADSVRACLNVAEEMGREVFLLTEMSHPGAEMFIQGAADEIARMGVDLGVKNYVGPS------ 158 (228)
T ss_dssp HHHHHTTCSEEEEESTTCHHHHHHHHHHHHHHTCEEEEECCCCSGGGGTTHHHHHHHHHHHHHHTTCCEEECCS------
T ss_pred HHHHhCCCCEEEEeccCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHHHHHHHHHHHHHHHhCCcEEEECC------
Confidence 3445689999988544344557777777777676666666776665543332 23322 47765542
Q ss_pred CCCCCHHHHHHHHHHHHHhcCC-cEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecccccCCCCHHHHHHHHH
Q 010211 345 LPIEDVPLLQEDIIRRCRSMQK-PVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMH 423 (515)
Q Consensus 345 lg~e~v~~aqk~Ii~~c~~aGK-PvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ETa~G~yPveaV~~m~ 423 (515)
.+ +...++|-+. .|. ..++ | -.- +++-.+. .++..|+|.+....--....-|.++++.+.
T Consensus 159 ---t~-~~e~~~ir~~---~~~~~~iv-~-------PGI---~~~g~~p-~~~~aGad~iVvGr~I~~a~dp~~a~~~~~ 219 (228)
T 3m47_A 159 ---TR-PERLSRLREI---IGQDSFLI-S-------PGV---GAQGGDP-GETLRFADAIIVGRSIYLADNPAAAAAGAI 219 (228)
T ss_dssp ---SC-HHHHHHHHHH---HCSSSEEE-E-------CC-------------CGGGTCSEEEECHHHHTSSCHHHHHHHHH
T ss_pred ---CC-hHHHHHHHHh---cCCCCEEE-e-------cCc---CcCCCCH-hHHHcCCCEEEECHHHhCCCCHHHHHHHHH
Confidence 11 1222223222 343 2223 1 000 2222345 678899999888665556678999988776
Q ss_pred HHHH
Q 010211 424 TVAL 427 (515)
Q Consensus 424 ~I~~ 427 (515)
+..+
T Consensus 220 ~~~~ 223 (228)
T 3m47_A 220 ESIK 223 (228)
T ss_dssp HHC-
T ss_pred HHHH
Confidence 6543
No 159
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=66.31 E-value=50 Score=32.68 Aligned_cols=97 Identities=18% Similarity=0.144 Sum_probs=59.8
Q ss_pred HHhhcchhcCCcEEEec------ccCCHHHHHH-HHHHHHhcCCCceEEEEec---ChhhhhcHHHHHhh-cCeeEEcCC
Q 010211 271 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 339 (515)
Q Consensus 271 ~dI~~al~~gvD~ValS------fVrsa~dv~~-vr~~l~~~~~~i~IIaKIE---t~~aveNldeIl~~-sDgImIgrg 339 (515)
+.++|-++.|+|++.+. +.-+.++-.+ ++...+..+.+++||+-+= |.++++....-.+. +|++|+-+-
T Consensus 41 ~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A~~~Gadavlv~~P 120 (304)
T 3cpr_A 41 EVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAASAGADGLLVVTP 120 (304)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 44577788999998762 2233333333 3444555567899999884 46777766666555 899998754
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcCCcEEEE
Q 010211 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (515)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aGKPvivA 371 (515)
...- +.-..+.+..-+.+.+.+.|+++.
T Consensus 121 ~y~~----~~~~~l~~~f~~ia~a~~lPiilY 148 (304)
T 3cpr_A 121 YYSK----PSQEGLLAHFGAIAAATEVPICLY 148 (304)
T ss_dssp CSSC----CCHHHHHHHHHHHHHHCCSCEEEE
T ss_pred CCCC----CCHHHHHHHHHHHHHhcCCCEEEE
Confidence 3311 222233333334456678999985
No 160
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=66.29 E-value=35 Score=33.50 Aligned_cols=120 Identities=13% Similarity=0.108 Sum_probs=68.1
Q ss_pred HHhhcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhhcCeeEEcCCcccccCCCC-C
Q 010211 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIE-D 349 (515)
Q Consensus 271 ~dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDgImIgrgDLg~elg~e-~ 349 (515)
+.++.+.+.|+|++.++=. ..++..++++++++.|-+...++-=.| ..+.+..|++.++|.+---.=.| -.|.. .
T Consensus 114 ~f~~~~~~aGvdgvii~Dl-p~ee~~~~~~~~~~~gl~~i~liaP~t--~~eri~~i~~~~~gfvY~vS~~G-vTG~~~~ 189 (267)
T 3vnd_A 114 EFYTKAQAAGVDSVLIADV-PVEESAPFSKAAKAHGIAPIFIAPPNA--DADTLKMVSEQGEGYTYLLSRAG-VTGTESK 189 (267)
T ss_dssp HHHHHHHHHTCCEEEETTS-CGGGCHHHHHHHHHTTCEEECEECTTC--CHHHHHHHHHHCCSCEEESCCCC-CC-----
T ss_pred HHHHHHHHcCCCEEEeCCC-CHhhHHHHHHHHHHcCCeEEEEECCCC--CHHHHHHHHHhCCCcEEEEecCC-CCCCccC
Confidence 3445566789999988744 346677788888877755332232222 35789999998775432211111 11221 1
Q ss_pred HHHHHHHHHHHHHhc-CCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeec
Q 010211 350 VPLLQEDIIRRCRSM-QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (515)
Q Consensus 350 v~~aqk~Ii~~c~~a-GKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs 406 (515)
++.-....++..+++ ..|+++ ..+.-+.. ++..++..|+|+++.-
T Consensus 190 ~~~~~~~~v~~vr~~~~~pv~v---------GfGI~~~e---~~~~~~~~gADgvVVG 235 (267)
T 3vnd_A 190 AGEPIENILTQLAEFNAPPPLL---------GFGIAEPE---QVRAAIKAGAAGAISG 235 (267)
T ss_dssp ---CHHHHHHHHHTTTCCCEEE---------CSSCCSHH---HHHHHHHTTCSEEEEC
T ss_pred CcHHHHHHHHHHHHhcCCCEEE---------ECCcCCHH---HHHHHHHcCCCEEEEC
Confidence 333344555555554 679888 33443333 3445788999999973
No 161
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=66.27 E-value=50 Score=32.41 Aligned_cols=97 Identities=13% Similarity=0.152 Sum_probs=59.2
Q ss_pred HHhhcchhcCCcEEEec------ccCCHHHHHH-HHHHHHhcCCCceEEEEec---ChhhhhcHHHHHhh-cCeeEEcCC
Q 010211 271 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 339 (515)
Q Consensus 271 ~dI~~al~~gvD~ValS------fVrsa~dv~~-vr~~l~~~~~~i~IIaKIE---t~~aveNldeIl~~-sDgImIgrg 339 (515)
+.++|-++.|+|++.+. +.-+.++-.+ ++...+..+.+++||+-+= |.++++......+. +|++|+-+-
T Consensus 25 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 104 (289)
T 2yxg_A 25 ENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSITP 104 (289)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 44577788999998762 2233333333 3444455567899999884 46777766666555 899998754
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcCCcEEEE
Q 010211 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (515)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aGKPvivA 371 (515)
...- +.-..+.+..-+.|.+.+.|+++.
T Consensus 105 ~y~~----~s~~~l~~~f~~ia~a~~lPiilY 132 (289)
T 2yxg_A 105 YYNK----PTQEGLRKHFGKVAESINLPIVLY 132 (289)
T ss_dssp CSSC----CCHHHHHHHHHHHHHHCSSCEEEE
T ss_pred CCCC----CCHHHHHHHHHHHHHhcCCCEEEE
Confidence 3321 122333333334456678999984
No 162
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=66.17 E-value=31 Score=34.31 Aligned_cols=97 Identities=19% Similarity=0.142 Sum_probs=60.0
Q ss_pred HHhhcchhcCCcEEEec------ccCCHHHHHH-HHHHHHhcCCCceEEEEe---cChhhhhcHHHHHhh-cCeeEEcCC
Q 010211 271 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKI---ESADSIPNLHSIISA-SDGAMVARG 339 (515)
Q Consensus 271 ~dI~~al~~gvD~ValS------fVrsa~dv~~-vr~~l~~~~~~i~IIaKI---Et~~aveNldeIl~~-sDgImIgrg 339 (515)
+.++|-++.|+|++.+. +.-+.++-.+ ++..++..+.++.||+-+ -|.++++......+. +|++++-+-
T Consensus 40 ~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 119 (304)
T 3l21_A 40 RLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEGAHGLLVVTP 119 (304)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 44567788999998762 2223333333 344455567789999988 456666666655555 899999754
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcCCcEEEE
Q 010211 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (515)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aGKPvivA 371 (515)
...- +.-..+.+..-+.|.+.+.|+++.
T Consensus 120 ~y~~----~s~~~l~~~f~~va~a~~lPiilY 147 (304)
T 3l21_A 120 YYSK----PPQRGLQAHFTAVADATELPMLLY 147 (304)
T ss_dssp CSSC----CCHHHHHHHHHHHHTSCSSCEEEE
T ss_pred CCCC----CCHHHHHHHHHHHHHhcCCCEEEE
Confidence 3211 233344445555566679999985
No 163
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=66.04 E-value=83 Score=32.54 Aligned_cols=139 Identities=19% Similarity=0.230 Sum_probs=91.5
Q ss_pred HHHhhcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEe-cC-hhhhhcHHHHHhh-cCeeEEcCCcccccCC
Q 010211 270 WEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKI-ES-ADSIPNLHSIISA-SDGAMVARGDLGAELP 346 (515)
Q Consensus 270 ~~dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKI-Et-~~aveNldeIl~~-sDgImIgrgDLg~elg 346 (515)
.+.|..-.+.|+|+|-++ |.+.++...++..-+. -++++++-| -+ ..+++ . ++. +|.+=|-||.++-
T Consensus 49 v~Qi~~l~~aG~diVRva-vp~~~~a~al~~I~~~--~~vPlvaDiHf~~~lal~---a-~e~G~dklRINPGNig~--- 118 (366)
T 3noy_A 49 LNQIKRLYEAGCEIVRVA-VPHKEDVEALEEIVKK--SPMPVIADIHFAPSYAFL---S-MEKGVHGIRINPGNIGK--- 118 (366)
T ss_dssp HHHHHHHHHTTCCEEEEE-CCSHHHHHHHHHHHHH--CSSCEEEECCSCHHHHHH---H-HHTTCSEEEECHHHHSC---
T ss_pred HHHHHHHHHcCCCEEEeC-CCChHHHHHHHHHHhc--CCCCEEEeCCCCHHHHHH---H-HHhCCCeEEECCcccCc---
Confidence 355555667899999887 4667777666665544 468999987 33 33332 2 334 8999999999873
Q ss_pred CCCHHHHHHHHHHHHHhcCCcEEEE-------eccccccccCCCcChHH-----HhHHHHHHHhCCcEEeecccccCCCC
Q 010211 347 IEDVPLLQEDIIRRCRSMQKPVIVA-------TNMLESMIDHPTPTRAE-----VSDIAIAVREGADAVMLSGETAHGKF 414 (515)
Q Consensus 347 ~e~v~~aqk~Ii~~c~~aGKPvivA-------TqmLeSMi~~~~PtrAE-----v~DvanaV~~G~D~vmLs~ETa~G~y 414 (515)
..-.+.++++|+++|+|+=+- ..+|+.+ ..||... ...+.-+-..|+|-+++| .+..-
T Consensus 119 ----~~~~~~vv~~ak~~~~piRIGvN~GSL~~~ll~~y---g~~~~eamVeSAl~~~~~~e~~gf~~iviS---~K~S~ 188 (366)
T 3noy_A 119 ----EEIVREIVEEAKRRGVAVRIGVNSGSLEKDLLEKY---GYPSAEALAESALRWSEKFEKWGFTNYKVS---IKGSD 188 (366)
T ss_dssp ----HHHHHHHHHHHHHHTCEEEEEEEGGGCCHHHHHHH---SSCCHHHHHHHHHHHHHHHHHTTCCCEEEE---EECSS
T ss_pred ----hhHHHHHHHHHHHcCCCEEEecCCcCCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHhCCCCeEEEe---eecCC
Confidence 234578999999999998653 2333332 2244322 223344555688888887 45556
Q ss_pred HHHHHHHHHHHHHH
Q 010211 415 PLKAVKVMHTVALR 428 (515)
Q Consensus 415 PveaV~~m~~I~~~ 428 (515)
+..+|+.-+.++.+
T Consensus 189 v~~~i~ayr~la~~ 202 (366)
T 3noy_A 189 VLQNVRANLIFAER 202 (366)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhc
Confidence 77788777777666
No 164
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=66.01 E-value=44 Score=35.28 Aligned_cols=89 Identities=17% Similarity=0.187 Sum_probs=49.5
Q ss_pred Cce-EEEEecChhhhhcHHHHHhh-----cCeeEEcCC-----cc---cccCC-CC--CHHHHHHHHHHHHHh-c--CCc
Q 010211 308 DIH-VIVKIESADSIPNLHSIISA-----SDGAMVARG-----DL---GAELP-IE--DVPLLQEDIIRRCRS-M--QKP 367 (515)
Q Consensus 308 ~i~-IIaKIEt~~aveNldeIl~~-----sDgImIgrg-----DL---g~elg-~e--~v~~aqk~Ii~~c~~-a--GKP 367 (515)
+.+ |++||=---..+++.+|++. +|||.+.-+ |+ ..+.| +. .+....-++++..++ . ..|
T Consensus 296 ~~P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iP 375 (443)
T 1tv5_A 296 KKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIP 375 (443)
T ss_dssp SCCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSC
T ss_pred CCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCc
Confidence 566 89999432222355566554 799987643 21 11111 11 112222344444443 4 689
Q ss_pred EEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeeccc
Q 010211 368 VIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGE 408 (515)
Q Consensus 368 vivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~E 408 (515)
+|... +.-+ ..|+..++..|+|+|++..-
T Consensus 376 VIg~G---------GI~s---~~DA~e~l~aGAd~Vqigra 404 (443)
T 1tv5_A 376 IIASG---------GIFS---GLDALEKIEAGASVCQLYSC 404 (443)
T ss_dssp EEEES---------SCCS---HHHHHHHHHTTEEEEEESHH
T ss_pred EEEEC---------CCCC---HHHHHHHHHcCCCEEEEcHH
Confidence 88743 3333 33677889999999998643
No 165
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=65.94 E-value=22 Score=35.24 Aligned_cols=97 Identities=8% Similarity=0.048 Sum_probs=60.5
Q ss_pred HHhhcchhcCCcEEEec------ccCCHHHHHH-HHHHHHhcCCCceEEEEe---cChhhhhcHHHHHhh-cCeeEEcCC
Q 010211 271 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKI---ESADSIPNLHSIISA-SDGAMVARG 339 (515)
Q Consensus 271 ~dI~~al~~gvD~ValS------fVrsa~dv~~-vr~~l~~~~~~i~IIaKI---Et~~aveNldeIl~~-sDgImIgrg 339 (515)
+.++|-++.|+|++.+. +.-+.++-.+ ++..++..+.++.||+-+ -|.++++......+. +|++|+-+-
T Consensus 29 ~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 108 (300)
T 3eb2_A 29 RLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVASTSVADAVAQAKLYEKLGADGILAILE 108 (300)
T ss_dssp HHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEESSHHHHHHHHHHHHHHTCSEEEEEEC
T ss_pred HHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 44467788999998642 2223333333 344445557788888877 467777777776666 899999754
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcCCcEEEE
Q 010211 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (515)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aGKPvivA 371 (515)
...- +.-..+.+..-..+.+.+.|+++.
T Consensus 109 ~y~~----~~~~~l~~~f~~va~a~~lPiilY 136 (300)
T 3eb2_A 109 AYFP----LKDAQIESYFRAIADAVEIPVVIY 136 (300)
T ss_dssp CSSC----CCHHHHHHHHHHHHHHCSSCEEEE
T ss_pred CCCC----CCHHHHHHHHHHHHHHCCCCEEEE
Confidence 3321 233344445555566678999985
No 166
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=65.64 E-value=38 Score=33.67 Aligned_cols=147 Identities=10% Similarity=0.061 Sum_probs=83.8
Q ss_pred CCCCHhhHHHhhcchhcCCcEEEeccc-------------CCHHHHHHHHHHHHhcCCCceEEEEecC-------hhhhh
Q 010211 263 PSITDKDWEDIKFGVDNQVDFYAVSFV-------------KDAKVVHELKDYLKSCNADIHVIVKIES-------ADSIP 322 (515)
Q Consensus 263 p~ltekD~~dI~~al~~gvD~ValSfV-------------rsa~dv~~vr~~l~~~~~~i~IIaKIEt-------~~ave 322 (515)
..+|-+|.--.+.+-+.|+|.+.++.- -+.+++...-..+.+..+..+|++=++- .++++
T Consensus 20 ~~~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pfgsy~~s~~~a~~ 99 (275)
T 1o66_A 20 AMLTAYESSFAALMDDAGVEMLLVGDSLGMAVQGRKSTLPVSLRDMCYHTECVARGAKNAMIVSDLPFGAYQQSKEQAFA 99 (275)
T ss_dssp EEEECCSHHHHHHHHHTTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCSSSEEEEECCTTSSSSCHHHHHH
T ss_pred EEEeCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhhCCCCeEEEECCCCCccCCHHHHHH
Confidence 344566765555566789998876421 1233333323334444556677777662 45778
Q ss_pred cHHHHHhh-cCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEe----cc---ccccccCCCcChHH--HhHH
Q 010211 323 NLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVAT----NM---LESMIDHPTPTRAE--VSDI 392 (515)
Q Consensus 323 NldeIl~~-sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivAT----qm---LeSMi~~~~PtrAE--v~Dv 392 (515)
|...+++. +++|-+-=| + .+...|+++.++|+||+--- |- +......++..+++ +.|.
T Consensus 100 na~rl~kaGa~aVklEdg--------~----e~~~~I~al~~agIpV~gHiGLtPQs~~~~ggf~v~grt~~a~~~i~rA 167 (275)
T 1o66_A 100 AAAELMAAGAHMVKLEGG--------V----WMAETTEFLQMRGIPVCAHIGLTPQSVFAFGGYKVQGRGGKAQALLNDA 167 (275)
T ss_dssp HHHHHHHTTCSEEEEECS--------G----GGHHHHHHHHHTTCCEEEEEESCGGGTTC-----------CHHHHHHHH
T ss_pred HHHHHHHcCCcEEEECCc--------H----HHHHHHHHHHHcCCCeEeeeccCceeecccCCeEEEeChHHHHHHHHHH
Confidence 88888887 899988533 1 23455667778999987211 11 11111112223333 7777
Q ss_pred HHHHHhCCcEEeecccccCCCCHHHHHHHHHHHHHHHh
Q 010211 393 AIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTE 430 (515)
Q Consensus 393 anaV~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE 430 (515)
-.+...|+|+++|=+ - |. +....|+++..
T Consensus 168 ~a~~eAGA~~ivlE~-----v-p~---~~a~~it~~l~ 196 (275)
T 1o66_A 168 KAHDDAGAAVVLMEC-----V-LA---ELAKKVTETVS 196 (275)
T ss_dssp HHHHHTTCSEEEEES-----C-CH---HHHHHHHHHCS
T ss_pred HHHHHcCCcEEEEec-----C-CH---HHHHHHHHhCC
Confidence 788889999999942 1 32 23456666554
No 167
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=65.62 E-value=36 Score=33.45 Aligned_cols=96 Identities=10% Similarity=0.160 Sum_probs=58.4
Q ss_pred HHhhcchhcCCcEEEecccCCH-------HHHHH-HHHHHHhcCCCceEEEEec---ChhhhhcHHHHHhh-cCeeEEcC
Q 010211 271 EDIKFGVDNQVDFYAVSFVKDA-------KVVHE-LKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVAR 338 (515)
Q Consensus 271 ~dI~~al~~gvD~ValSfVrsa-------~dv~~-vr~~l~~~~~~i~IIaKIE---t~~aveNldeIl~~-sDgImIgr 338 (515)
+.++|-++.|+|++.+. -.+. ++-.+ ++..++..+.++.||+-+= |.++++......+. +|++|+-+
T Consensus 26 ~lv~~li~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 104 (291)
T 3tak_A 26 KLVEWHIEQGTNSIVAV-GTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLGADAALLVT 104 (291)
T ss_dssp HHHHHHHHHTCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHCCCCEEEEC-ccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEcC
Confidence 44567788999998652 2333 33323 3334455567899999873 56666666665555 89999875
Q ss_pred CcccccCCCCCHHHHHHHHHHHHHhcCCcEEEE
Q 010211 339 GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (515)
Q Consensus 339 gDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivA 371 (515)
-...- +.-..+.+..-+.+.+.+.|+++.
T Consensus 105 P~y~~----~~~~~l~~~f~~ia~a~~lPiilY 133 (291)
T 3tak_A 105 PYYNK----PTQEGLYQHYKAIAEAVELPLILY 133 (291)
T ss_dssp CCSSC----CCHHHHHHHHHHHHHHCCSCEEEE
T ss_pred CCCCC----CCHHHHHHHHHHHHHhcCCCEEEE
Confidence 43321 122333444444455669999985
No 168
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=65.55 E-value=35 Score=31.92 Aligned_cols=134 Identities=10% Similarity=0.114 Sum_probs=67.3
Q ss_pred HHHhhcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEE-----ecCh-------hhhhcHHHHHhh-cCeeEE
Q 010211 270 WEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVK-----IESA-------DSIPNLHSIISA-SDGAMV 336 (515)
Q Consensus 270 ~~dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaK-----IEt~-------~aveNldeIl~~-sDgImI 336 (515)
.++++.+++.|+|.|.+.. ....+...+.+.++..+.++.+-.. +++. ..++.+.+..+. +|.|++
T Consensus 87 ~~~~~~~l~~Gad~V~lg~-~~l~~p~~~~~~~~~~g~~~~~~l~~~~g~v~~~g~~~~~~~~~e~~~~~~~~G~~~i~~ 165 (244)
T 1vzw_A 87 DDTLAAALATGCTRVNLGT-AALETPEWVAKVIAEHGDKIAVGLDVRGTTLRGRGWTRDGGDLYETLDRLNKEGCARYVV 165 (244)
T ss_dssp HHHHHHHHHTTCSEEEECH-HHHHCHHHHHHHHHHHGGGEEEEEEEETTEECCSSSCCCCCBHHHHHHHHHHTTCCCEEE
T ss_pred HHHHHHHHHcCCCEEEECc-hHhhCHHHHHHHHHHcCCcEEEEEEccCCEEEEcCcccCCCCHHHHHHHHHhCCCCEEEE
Confidence 3457777788999988753 1122222344444444434333222 3322 234444555555 788876
Q ss_pred cCC--cccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHh---CCcEEeecccccC
Q 010211 337 ARG--DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVRE---GADAVMLSGETAH 411 (515)
Q Consensus 337 grg--DLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~---G~D~vmLs~ETa~ 411 (515)
-.. |.. .-|+ . ....+++ ++..+.|++.. .+.-+.. |+..+... |+|++++..---.
T Consensus 166 ~~~~~~~~-~~g~-~-~~~~~~i---~~~~~ipvia~---------GGI~~~~---d~~~~~~~~~~Gadgv~vG~al~~ 227 (244)
T 1vzw_A 166 TDIAKDGT-LQGP-N-LELLKNV---CAATDRPVVAS---------GGVSSLD---DLRAIAGLVPAGVEGAIVGKALYA 227 (244)
T ss_dssp EEC--------CC-C-HHHHHHH---HHTCSSCEEEE---------SCCCSHH---HHHHHHTTGGGTEEEEEECHHHHT
T ss_pred eccCcccc-cCCC-C-HHHHHHH---HHhcCCCEEEE---------CCCCCHH---HHHHHHhhccCCCceeeeeHHHHc
Confidence 421 111 1122 2 2223333 34558999883 3444433 44455666 9999998643334
Q ss_pred CCCH-HHHHHHH
Q 010211 412 GKFP-LKAVKVM 422 (515)
Q Consensus 412 G~yP-veaV~~m 422 (515)
++++ -++++.+
T Consensus 228 ~~~~~~~~~~~~ 239 (244)
T 1vzw_A 228 KAFTLEEALEAT 239 (244)
T ss_dssp TSSCHHHHHHHH
T ss_pred CCCCHHHHHHHh
Confidence 5544 3444443
No 169
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=65.52 E-value=38 Score=32.20 Aligned_cols=143 Identities=10% Similarity=0.003 Sum_probs=77.6
Q ss_pred HHhhcchhcCCcEEEecccC----------CHHHHHHHHHHHHhcCCCceEEEE-------ecC------hhhhhcHHHH
Q 010211 271 EDIKFGVDNQVDFYAVSFVK----------DAKVVHELKDYLKSCNADIHVIVK-------IES------ADSIPNLHSI 327 (515)
Q Consensus 271 ~dI~~al~~gvD~ValSfVr----------sa~dv~~vr~~l~~~~~~i~IIaK-------IEt------~~aveNldeI 327 (515)
+.++.+.+.|+|+|-+.+-. +.+++.++++.+++.|-.+..+.- +-+ .++++.+...
T Consensus 34 ~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~ 113 (295)
T 3cqj_A 34 ERLQLAKTLGFDFVEMSVDETDERLSRLDWSREQRLALVNAIVETGVRVPSMCLSAHRRFPLGSEDDAVRAQGLEIMRKA 113 (295)
T ss_dssp HHHHHHHHTTCSEEEEECCSSHHHHGGGGCCHHHHHHHHHHHHHHCCEEEEEEEGGGGTSCTTCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCEEEEecCCcccccCcccCCHHHHHHHHHHHHHcCCeEEEEecCcccCCCCCCCCHHHHHHHHHHHHHH
Confidence 45677778899999887543 456788899999887765443321 111 1234445555
Q ss_pred Hhh-----cCeeEEcCCcccccCC----CCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHh
Q 010211 328 ISA-----SDGAMVARGDLGAELP----IEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVRE 398 (515)
Q Consensus 328 l~~-----sDgImIgrgDLg~elg----~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~ 398 (515)
++. ++.|.+..++-..... ++.+....+++.+.+.+.|..+.+ |.+-.....+..+..++...+
T Consensus 114 i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~l-----En~~~~~~~~~~~~~~l~~~v-- 186 (295)
T 3cqj_A 114 IQFAQDVGIRVIQLAGYDVYYQEANNETRRRFRDGLKESVEMASRAQVTLAM-----EIMDYPLMNSISKALGYAHYL-- 186 (295)
T ss_dssp HHHHHHHTCCEEEECCCSCSSSCCCHHHHHHHHHHHHHHHHHHHHHTCEEEE-----ECCSSGGGCSHHHHHHHHHHH--
T ss_pred HHHHHHcCCCEEEECCCCCCcCcCHHHHHHHHHHHHHHHHHHHHHhCCEEEE-----eeCCCcccCCHHHHHHHHHhc--
Confidence 443 5666665443211111 123555667777888888877655 333222233445555554444
Q ss_pred CCcEEeeccccc----CCCCHHHHHH
Q 010211 399 GADAVMLSGETA----HGKFPLKAVK 420 (515)
Q Consensus 399 G~D~vmLs~ETa----~G~yPveaV~ 420 (515)
+.+.+-+.-+|. .|.-|.+.++
T Consensus 187 ~~~~vg~~~D~~h~~~~g~d~~~~l~ 212 (295)
T 3cqj_A 187 NNPWFQLYPDIGNLSAWDNDVQMELQ 212 (295)
T ss_dssp CCTTEEEECBHHHHHSSSCCHHHHHH
T ss_pred CCCCeEEEeccchHhhcCCCHHHHHH
Confidence 333344444442 3555655444
No 170
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=65.28 E-value=78 Score=29.67 Aligned_cols=145 Identities=12% Similarity=0.096 Sum_probs=82.6
Q ss_pred HHhhcchhcCCcEEEeccc-------CCHHHHHHHHHHHHhcCCCceEEEE-ec------ChhhhhcHHHHHhh-----c
Q 010211 271 EDIKFGVDNQVDFYAVSFV-------KDAKVVHELKDYLKSCNADIHVIVK-IE------SADSIPNLHSIISA-----S 331 (515)
Q Consensus 271 ~dI~~al~~gvD~ValSfV-------rsa~dv~~vr~~l~~~~~~i~IIaK-IE------t~~aveNldeIl~~-----s 331 (515)
+.++.+.+.|.|+|-+... .+.+++.++++.+++.|-.+..+.- .. ..+.++.+...++. +
T Consensus 19 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~ 98 (286)
T 3dx5_A 19 DIVQFAYENGFEGIELWGTHAQNLYMQEYETTERELNCLKDKTLEITMISDYLDISLSADFEKTIEKCEQLAILANWFKT 98 (286)
T ss_dssp HHHHHHHHTTCCEEEEEHHHHHHHHHHCHHHHHHHHHHTGGGTCCEEEEECCCCCSTTSCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhCCCEEEEcccccccccccCHHHHHHHHHHHHHcCCeEEEEecCCCCCCchhHHHHHHHHHHHHHHHHHhCC
Confidence 4567778899999987432 1246777888888887766544421 10 12345555555554 5
Q ss_pred CeeEEcCCcccccCC----CCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecc
Q 010211 332 DGAMVARGDLGAELP----IEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 407 (515)
Q Consensus 332 DgImIgrgDLg~elg----~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ 407 (515)
+.|.+.+|...-... ++.+....+++.+.|.++|..+.+ |.+-.....+..+..++...+. .+.+-+.-
T Consensus 99 ~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~l-----E~~~~~~~~~~~~~~~l~~~~~--~~~vg~~~ 171 (286)
T 3dx5_A 99 NKIRTFAGQKGSADFSQQERQEYVNRIRMICELFAQHNMYVLL-----ETHPNTLTDTLPSTLELLGEVD--HPNLKINL 171 (286)
T ss_dssp CEEEECSCSSCGGGSCHHHHHHHHHHHHHHHHHHHHTTCEEEE-----ECCTTSTTSSHHHHHHHHHHHC--CTTEEEEE
T ss_pred CEEEEcCCCCCcccCcHHHHHHHHHHHHHHHHHHHHhCCEEEE-----ecCCCcCcCCHHHHHHHHHhcC--CCCeEEEe
Confidence 777776665432211 134556667888888888987665 3333333345555555555542 33333333
Q ss_pred ccc----CCCCHHHHHHHH
Q 010211 408 ETA----HGKFPLKAVKVM 422 (515)
Q Consensus 408 ETa----~G~yPveaV~~m 422 (515)
+|. .|.-|.++++.+
T Consensus 172 D~~h~~~~g~d~~~~l~~~ 190 (286)
T 3dx5_A 172 DFLHIWESGADPVDSFQQL 190 (286)
T ss_dssp EHHHHHHTTCCHHHHHHHH
T ss_pred ccccHhhcCCCHHHHHHHH
Confidence 433 365666665554
No 171
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=64.92 E-value=51 Score=32.61 Aligned_cols=97 Identities=12% Similarity=0.099 Sum_probs=60.5
Q ss_pred HHhhcchhcCCcEEEec------ccCCHHHHHH-HHHHHHhcCCCceEEEEec---ChhhhhcHHHHHhh-cCeeEEcCC
Q 010211 271 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 339 (515)
Q Consensus 271 ~dI~~al~~gvD~ValS------fVrsa~dv~~-vr~~l~~~~~~i~IIaKIE---t~~aveNldeIl~~-sDgImIgrg 339 (515)
+.++|-++.|+|++.+. +.-+.++-.+ ++..++..+.++.||+-+= |.++++......+. +|++|+-+-
T Consensus 37 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 116 (301)
T 1xky_A 37 KLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKATEVGVDAVMLVAP 116 (301)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 44567788999998762 2233333333 3444555567899999884 47777776666555 899998654
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcCCcEEEE
Q 010211 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (515)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aGKPvivA 371 (515)
...- +.-..+.+..-+.|.+.+.|+++.
T Consensus 117 ~y~~----~s~~~l~~~f~~va~a~~lPiilY 144 (301)
T 1xky_A 117 YYNK----PSQEGMYQHFKAIAESTPLPVMLY 144 (301)
T ss_dssp CSSC----CCHHHHHHHHHHHHHTCSSCEEEE
T ss_pred CCCC----CCHHHHHHHHHHHHHhcCCCEEEE
Confidence 3311 122334444444566778999984
No 172
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=64.28 E-value=20 Score=35.65 Aligned_cols=68 Identities=24% Similarity=0.326 Sum_probs=50.6
Q ss_pred CeEEEEecCCCCC---------C----HHHHHHHHHhCCcEEEEec-CC--C-----ChHHHHHHHHHHHHHHhhcCCce
Q 010211 100 KTKIVCTIGPSTS---------S----REMIWKLAEEGMNVARLNM-SH--G-----DHASHQKTIDLVKEYNSQFEDKA 158 (515)
Q Consensus 100 ~TKIi~TiGPss~---------~----~e~i~~li~aGm~v~RiN~-SH--g-----~~e~~~~~i~~ir~~~~~~~~~~ 158 (515)
+|+||+=|.+.-+ + .+..++|+++|+++.=+|. |- | ..|++++++..|+.+.++++
T Consensus 14 ~~~imGilN~TpdSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~~--- 90 (282)
T 1aj0_A 14 HPHVMGILNVTPDSFSDGGTHNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFE--- 90 (282)
T ss_dssp SCEEEEEEECCTTTSCCCCCCTHHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHCC---
T ss_pred CCEEEEEEeCCCCccccccccCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhcC---
Confidence 5678877765432 2 2356789999999999999 53 2 15889999999998887765
Q ss_pred EEEEEecCCCee
Q 010211 159 VAIMLDTKGPEV 170 (515)
Q Consensus 159 i~I~lDL~GPkI 170 (515)
+.|.+|+.-|++
T Consensus 91 ~piSIDT~~~~v 102 (282)
T 1aj0_A 91 VWISVDTSKPEV 102 (282)
T ss_dssp CEEEEECCCHHH
T ss_pred CeEEEeCCCHHH
Confidence 668889987764
No 173
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=64.10 E-value=52 Score=31.73 Aligned_cols=126 Identities=11% Similarity=0.058 Sum_probs=70.5
Q ss_pred chhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh----cCeeEEcCC---cccccCCCC
Q 010211 276 GVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA----SDGAMVARG---DLGAELPIE 348 (515)
Q Consensus 276 al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~----sDgImIgrg---DLg~elg~e 348 (515)
+...|+|+|-++- +.-.+..+|+++ +....|-+-+ .+.+|+... +|.|.+|+- +.-...+..
T Consensus 108 A~~~gAdGVHLg~--~dl~~~~~r~~~---~~~~~iG~S~------ht~~Ea~~A~~~GaDyI~vgpvf~T~tK~~~~~~ 176 (243)
T 3o63_A 108 ARAAGADVLHLGQ--RDLPVNVARQIL---APDTLIGRST------HDPDQVAAAAAGDADYFCVGPCWPTPTKPGRAAP 176 (243)
T ss_dssp HHHHTCSEEEECT--TSSCHHHHHHHS---CTTCEEEEEE------CSHHHHHHHHHSSCSEEEECCSSCCCC-----CC
T ss_pred HHHhCCCEEEecC--CcCCHHHHHHhh---CCCCEEEEeC------CCHHHHHHHhhCCCCEEEEcCccCCCCCCCcchh
Confidence 5567899987763 222345566655 3344444433 444454433 899999872 111111001
Q ss_pred CHHHHHHHHHHHHHh--cCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecccccCCCCHHHHHHHHHHHH
Q 010211 349 DVPLLQEDIIRRCRS--MQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVA 426 (515)
Q Consensus 349 ~v~~aqk~Ii~~c~~--aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ETa~G~yPveaV~~m~~I~ 426 (515)
.+ ...+++ +.. ..+|++.. .+. +.. ++..+...|+|++.+.+.--.-.-|.++++.+.+..
T Consensus 177 gl-~~l~~~---~~~~~~~iPvvAi---------GGI-~~~---ni~~~~~aGa~gvav~sai~~a~dp~~a~~~l~~~~ 239 (243)
T 3o63_A 177 GL-GLVRVA---AELGGDDKPWFAI---------GGI-NAQ---RLPAVLDAGARRIVVVRAITSADDPRAAAEQLRSAL 239 (243)
T ss_dssp CH-HHHHHH---HTC---CCCEEEE---------SSC-CTT---THHHHHHTTCCCEEESHHHHTCSSHHHHHHHHHHHH
T ss_pred hH-HHHHHH---HHhccCCCCEEEe---------cCC-CHH---HHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHHHH
Confidence 11 122222 322 37898773 333 322 345677889999998765556678999999998876
Q ss_pred HHH
Q 010211 427 LRT 429 (515)
Q Consensus 427 ~~a 429 (515)
.++
T Consensus 240 ~~~ 242 (243)
T 3o63_A 240 TAA 242 (243)
T ss_dssp HTC
T ss_pred Hhc
Confidence 543
No 174
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=64.06 E-value=55 Score=32.13 Aligned_cols=97 Identities=13% Similarity=0.114 Sum_probs=59.8
Q ss_pred HHhhcchh-cCCcEEEec------ccCCHHHHHH-HHHHHHhcCCCceEEEEec---ChhhhhcHHHHHhh-cCeeEEcC
Q 010211 271 EDIKFGVD-NQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVAR 338 (515)
Q Consensus 271 ~dI~~al~-~gvD~ValS------fVrsa~dv~~-vr~~l~~~~~~i~IIaKIE---t~~aveNldeIl~~-sDgImIgr 338 (515)
+.++|-++ .|+|++.+. +.-+.++-.+ ++...+..+.++.||+-+= |.++++......+. +|++|+-+
T Consensus 28 ~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 107 (293)
T 1f6k_A 28 QIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYATELGYDCLSAVT 107 (293)
T ss_dssp HHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 45577888 999998762 3334444333 3444555677899999884 47777766666555 89999875
Q ss_pred CcccccCCCCCHHHHHHHHHHHHHhcCCcEEEE
Q 010211 339 GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (515)
Q Consensus 339 gDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivA 371 (515)
-...- ...+.+....+.| |.+.+.|+++.
T Consensus 108 P~y~~-~~~~~l~~~f~~v---a~a~~lPiilY 136 (293)
T 1f6k_A 108 PFYYK-FSFPEIKHYYDTI---IAETGSNMIVY 136 (293)
T ss_dssp CCSSC-CCHHHHHHHHHHH---HHHHCCCEEEE
T ss_pred CCCCC-CCHHHHHHHHHHH---HHhCCCCEEEE
Confidence 43311 1113344444444 55568899984
No 175
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=63.88 E-value=45 Score=32.94 Aligned_cols=97 Identities=9% Similarity=0.078 Sum_probs=59.6
Q ss_pred HHhhcchhcCCcEEEec------ccCCHHHHHH-HHHHHHhcCCCceEEEEec---ChhhhhcHHHHHhh-cCeeEEcCC
Q 010211 271 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 339 (515)
Q Consensus 271 ~dI~~al~~gvD~ValS------fVrsa~dv~~-vr~~l~~~~~~i~IIaKIE---t~~aveNldeIl~~-sDgImIgrg 339 (515)
+.++|-++.|+|++.+. +.-+.++-.+ ++..++..+.++.||+-+= |.++++......+. +|++|+-+-
T Consensus 25 ~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 104 (297)
T 2rfg_A 25 GLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQHAQQAGADAVLCVAG 104 (297)
T ss_dssp HHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCCCCHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 44567788999998752 2233333333 3444455567899999884 46777766666555 899999754
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcCCcEEEE
Q 010211 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (515)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aGKPvivA 371 (515)
...- +.-..+.+..-+.|.+.+.|+++.
T Consensus 105 ~y~~----~s~~~l~~~f~~va~a~~lPiilY 132 (297)
T 2rfg_A 105 YYNR----PSQEGLYQHFKMVHDAIDIPIIVY 132 (297)
T ss_dssp TTTC----CCHHHHHHHHHHHHHHCSSCEEEE
T ss_pred CCCC----CCHHHHHHHHHHHHHhcCCCEEEE
Confidence 4321 122333333334456668999884
No 176
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=63.87 E-value=38 Score=33.50 Aligned_cols=97 Identities=15% Similarity=0.150 Sum_probs=57.5
Q ss_pred HHHHhh-cCeeEEc-CCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHH-HhHHHHHHHhCCc
Q 010211 325 HSIISA-SDGAMVA-RGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGAD 401 (515)
Q Consensus 325 deIl~~-sDgImIg-rgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAE-v~DvanaV~~G~D 401 (515)
+..++. +||+++. ---=+..+..++-..+.+.+++.++.+..||+..| +..+-.| +...-.+-..|+|
T Consensus 35 ~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGv---------g~~~t~~ai~la~~a~~~Gad 105 (301)
T 3m5v_A 35 KRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGA---------GSNATHEAVGLAKFAKEHGAD 105 (301)
T ss_dssp HHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEEC---------CCSSHHHHHHHHHHHHHTTCS
T ss_pred HHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeC---------CCCCHHHHHHHHHHHHHcCCC
Confidence 333444 8999984 11111222224444455555555544357888854 4444445 5556677778999
Q ss_pred EEeecccccCCCCHHHHHHHHHHHHHHHh
Q 010211 402 AVMLSGETAHGKFPLKAVKVMHTVALRTE 430 (515)
Q Consensus 402 ~vmLs~ETa~G~yPveaV~~m~~I~~~aE 430 (515)
++|+..=--...-+-+.++....|+..++
T Consensus 106 avlv~~P~y~~~s~~~l~~~f~~va~a~~ 134 (301)
T 3m5v_A 106 GILSVAPYYNKPTQQGLYEHYKAIAQSVD 134 (301)
T ss_dssp EEEEECCCSSCCCHHHHHHHHHHHHHHCS
T ss_pred EEEEcCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 99986332223335678888899988774
No 177
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=63.74 E-value=36 Score=32.30 Aligned_cols=135 Identities=15% Similarity=0.168 Sum_probs=72.0
Q ss_pred HHhhcchhcCCcEEEe-----cccCCH----HHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh-cCeeEEcCCc
Q 010211 271 EDIKFGVDNQVDFYAV-----SFVKDA----KVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGD 340 (515)
Q Consensus 271 ~dI~~al~~gvD~Val-----SfVrsa----~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDgImIgrgD 340 (515)
+.++.+.+.|+|++-+ .||.+. +.++++|++ .+....+-.+|++++- -++..+++ +||+.+.-.-
T Consensus 21 ~~i~~~~~~Gad~ihldi~DG~fvp~~~~g~~~v~~lr~~---~~~~~~vhlmv~dp~~--~i~~~~~aGadgv~vh~e~ 95 (230)
T 1tqj_A 21 EEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPL---TKKTLDVHLMIVEPEK--YVEDFAKAGADIISVHVEH 95 (230)
T ss_dssp HHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHGGG---CCSEEEEEEESSSGGG--THHHHHHHTCSEEEEECST
T ss_pred HHHHHHHHcCCCEEEEEEEecCCCcchhhhHHHHHHHHhh---cCCcEEEEEEccCHHH--HHHHHHHcCCCEEEECccc
Confidence 4455666778887633 233222 233333332 1223334468887743 35666666 8999987210
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeec-cccc--CCCCHHH
Q 010211 341 LGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS-GETA--HGKFPLK 417 (515)
Q Consensus 341 Lg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs-~ETa--~G~yPve 417 (515)
-. . + ...+.++.++++|+-++++. +..+| .|. ...+..++|.+++. -+.. --+|+-.
T Consensus 96 ~~---~--~---~~~~~~~~i~~~g~~~gv~~-------~p~t~--~e~---~~~~~~~~D~v~~msv~pg~ggq~~~~~ 155 (230)
T 1tqj_A 96 NA---S--P---HLHRTLCQIRELGKKAGAVL-------NPSTP--LDF---LEYVLPVCDLILIMSVNPGFGGQSFIPE 155 (230)
T ss_dssp TT---C--T---THHHHHHHHHHTTCEEEEEE-------CTTCC--GGG---GTTTGGGCSEEEEESSCC----CCCCGG
T ss_pred cc---c--h---hHHHHHHHHHHcCCcEEEEE-------eCCCc--HHH---HHHHHhcCCEEEEEEeccccCCccCcHH
Confidence 01 1 1 23467888899999999974 21233 221 24566789987542 2222 2246555
Q ss_pred HHHHHHHHHHHHh
Q 010211 418 AVKVMHTVALRTE 430 (515)
Q Consensus 418 aV~~m~~I~~~aE 430 (515)
..+.++++.+..+
T Consensus 156 ~~~~i~~lr~~~~ 168 (230)
T 1tqj_A 156 VLPKIRALRQMCD 168 (230)
T ss_dssp GHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 5555555555543
No 178
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=63.68 E-value=74 Score=30.27 Aligned_cols=90 Identities=12% Similarity=0.106 Sum_probs=50.2
Q ss_pred HHHhhcchhcCCcEEEe--cccC--------------------CHHHHHHHHHHHHhcCCCceEEEEe-cChhhhhcHHH
Q 010211 270 WEDIKFGVDNQVDFYAV--SFVK--------------------DAKVVHELKDYLKSCNADIHVIVKI-ESADSIPNLHS 326 (515)
Q Consensus 270 ~~dI~~al~~gvD~Val--SfVr--------------------sa~dv~~vr~~l~~~~~~i~IIaKI-Et~~aveNlde 326 (515)
.+.++...+.|+|+|-+ ||.. +.+...++-+.+++. -+++++.+. .++.-...++.
T Consensus 35 ~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~-~~~Pv~~m~~~~~~~~~~~~~ 113 (262)
T 1rd5_A 35 AEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPE-LSCPVVLLSYYKPIMFRSLAK 113 (262)
T ss_dssp HHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGG-CSSCEEEECCSHHHHSCCTHH
T ss_pred HHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc-CCCCEEEEecCcHHHHHHHHH
Confidence 45566667889998766 3321 222222222223332 356676664 22211112344
Q ss_pred HHhh-cCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEE
Q 010211 327 IISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIV 370 (515)
Q Consensus 327 Il~~-sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPviv 370 (515)
..+. +||+.+. |+.. ++ .++++..++++|.+.+.
T Consensus 114 a~~aGadgv~v~--d~~~----~~----~~~~~~~~~~~g~~~i~ 148 (262)
T 1rd5_A 114 MKEAGVHGLIVP--DLPY----VA----AHSLWSEAKNNNLELVL 148 (262)
T ss_dssp HHHTTCCEEECT--TCBT----TT----HHHHHHHHHHTTCEECE
T ss_pred HHHcCCCEEEEc--CCCh----hh----HHHHHHHHHHcCCceEE
Confidence 4555 8999984 6544 33 46777889999988765
No 179
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=63.33 E-value=23 Score=36.02 Aligned_cols=128 Identities=14% Similarity=0.158 Sum_probs=65.1
Q ss_pred CCCHhhHHHh--------hcchhcCCcEEEeccc-------------CCH------------HHHHHHHHHHH-hcCCCc
Q 010211 264 SITDKDWEDI--------KFGVDNQVDFYAVSFV-------------KDA------------KVVHELKDYLK-SCNADI 309 (515)
Q Consensus 264 ~ltekD~~dI--------~~al~~gvD~ValSfV-------------rsa------------~dv~~vr~~l~-~~~~~i 309 (515)
.||..|++.+ +.+.+.|+|+|=+-.. +.. .-+.++-+.+. ..+.+.
T Consensus 147 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~ 226 (363)
T 3l5l_A 147 EMTLDDIARVKQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENL 226 (363)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCc
Confidence 5788888776 2345689999866432 111 11222222232 336677
Q ss_pred eEEEEecC---h----hhhhcHHHHHhh-----cCeeEEcCCccccc--CCC-CC-HHHHHHHHHHHHHhcCCcEEEEec
Q 010211 310 HVIVKIES---A----DSIPNLHSIISA-----SDGAMVARGDLGAE--LPI-ED-VPLLQEDIIRRCRSMQKPVIVATN 373 (515)
Q Consensus 310 ~IIaKIEt---~----~aveNldeIl~~-----sDgImIgrgDLg~e--lg~-e~-v~~aqk~Ii~~c~~aGKPvivATq 373 (515)
.|..||-- . ..++...++++. +|.|-+.-|...-. ++. +. -....++|- +..+.|++...
T Consensus 227 pV~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir---~~~~iPVi~~G- 302 (363)
T 3l5l_A 227 PLTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVR---REAKLPVTSAW- 302 (363)
T ss_dssp CEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHH---HHHTCCEEECS-
T ss_pred eEEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHH---HHcCCcEEEeC-
Confidence 78888832 1 112333333332 68888765543221 111 11 111222222 23478988732
Q ss_pred cccccccCCCcChHHHhHHHHHHHhC-CcEEeec
Q 010211 374 MLESMIDHPTPTRAEVSDIAIAVREG-ADAVMLS 406 (515)
Q Consensus 374 mLeSMi~~~~PtrAEv~DvanaV~~G-~D~vmLs 406 (515)
..-+.. +...++..| +|.|++.
T Consensus 303 --------gI~s~e---~a~~~l~~G~aD~V~iG 325 (363)
T 3l5l_A 303 --------GFGTPQ---LAEAALQANQLDLVSVG 325 (363)
T ss_dssp --------STTSHH---HHHHHHHTTSCSEEECC
T ss_pred --------CCCCHH---HHHHHHHCCCccEEEec
Confidence 222222 233678888 9999985
No 180
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=63.18 E-value=22 Score=33.42 Aligned_cols=125 Identities=12% Similarity=0.123 Sum_probs=62.2
Q ss_pred HHhhcchhcCCcEEEec-----ccCCHHHHHHHHHHHHhcCCCceEEE--EecChhhhhcHHHHHhh-cCeeEEcCCccc
Q 010211 271 EDIKFGVDNQVDFYAVS-----FVKDAKVVHELKDYLKSCNADIHVIV--KIESADSIPNLHSIISA-SDGAMVARGDLG 342 (515)
Q Consensus 271 ~dI~~al~~gvD~ValS-----fVrsa~dv~~vr~~l~~~~~~i~IIa--KIEt~~aveNldeIl~~-sDgImIgrgDLg 342 (515)
+.++...+.|+|++-+. |...... ..+++.-+.. ++++++ .|.+++ .+++.++. +|+|.+++..|.
T Consensus 36 ~~a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~~--~ipv~v~ggI~~~~---~~~~~l~~Gad~V~lg~~~l~ 109 (244)
T 1vzw_A 36 EAALAWQRSGAEWLHLVDLDAAFGTGDNR-ALIAEVAQAM--DIKVELSGGIRDDD---TLAAALATGCTRVNLGTAALE 109 (244)
T ss_dssp HHHHHHHHTTCSEEEEEEHHHHHTSCCCH-HHHHHHHHHC--SSEEEEESSCCSHH---HHHHHHHTTCSEEEECHHHHH
T ss_pred HHHHHHHHcCCCEEEEecCchhhcCCChH-HHHHHHHHhc--CCcEEEECCcCCHH---HHHHHHHcCCCEEEECchHhh
Confidence 33455567899998763 3344433 3344433322 456666 466654 36666666 899999876652
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcCCcEEEEecccc-cc-ccCC---CcChHHHhHHHHHHHhCCcEEeecccccCCC
Q 010211 343 AELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLE-SM-IDHP---TPTRAEVSDIAIAVREGADAVMLSGETAHGK 413 (515)
Q Consensus 343 ~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLe-SM-i~~~---~PtrAEv~DvanaV~~G~D~vmLs~ETa~G~ 413 (515)
- +. .+.+..+..|..++++-.... .. ++.- .++..| .+..+...|+|.+++++-+.-|.
T Consensus 110 ~-------p~---~~~~~~~~~g~~~~~~l~~~~g~v~~~g~~~~~~~~~e--~~~~~~~~G~~~i~~~~~~~~~~ 173 (244)
T 1vzw_A 110 T-------PE---WVAKVIAEHGDKIAVGLDVRGTTLRGRGWTRDGGDLYE--TLDRLNKEGCARYVVTDIAKDGT 173 (244)
T ss_dssp C-------HH---HHHHHHHHHGGGEEEEEEEETTEECCSSSCCCCCBHHH--HHHHHHHTTCCCEEEEEC-----
T ss_pred C-------HH---HHHHHHHHcCCcEEEEEEccCCEEEEcCcccCCCCHHH--HHHHHHhCCCCEEEEeccCcccc
Confidence 2 12 233334444544444322110 00 0110 012223 23455668999999876555444
No 181
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=62.62 E-value=80 Score=30.12 Aligned_cols=130 Identities=17% Similarity=0.224 Sum_probs=74.2
Q ss_pred HHhhcchhcCCcEEEe-----cccCC----HHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh-cCeeEEcCCc
Q 010211 271 EDIKFGVDNQVDFYAV-----SFVKD----AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGD 340 (515)
Q Consensus 271 ~dI~~al~~gvD~Val-----SfVrs----a~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDgImIgrgD 340 (515)
+.++.. +.|+|++-+ .||.+ ...++.+|++ .+..+-+-.||+.++-. ++..++. +|+|.+-
T Consensus 17 ~~i~~~-~~gad~lHvDvmDG~fvpn~t~G~~~v~~lr~~---~~~~~dvhLmv~dp~~~--i~~~~~aGAd~itvh--- 87 (231)
T 3ctl_A 17 EQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKL---ATKPLDCHLMVTRPQDY--IAQLARAGADFITLH--- 87 (231)
T ss_dssp HHHHHH-HTTCSCEEEEEECSSSSSCCCBCHHHHHHHHTT---CCSCEEEEEESSCGGGT--HHHHHHHTCSEEEEC---
T ss_pred HHHHHH-HcCCCEEEEEEEeCccCccchhcHHHHHHHHhc---cCCcEEEEEEecCHHHH--HHHHHHcCCCEEEEC---
Confidence 344555 677776422 34433 3344444443 13345667799988654 6777777 8999885
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEee-cccccCC--CCH--
Q 010211 341 LGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVML-SGETAHG--KFP-- 415 (515)
Q Consensus 341 Lg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmL-s~ETa~G--~yP-- 415 (515)
.|-. -. -.++.++.++++|+.++++. +..+| .| ....+..++|.+++ |-+.-.| +|.
T Consensus 88 --~Ea~---~~-~~~~~i~~i~~~G~k~gv~l-------np~tp--~~---~~~~~l~~~D~VlvmsV~pGfggQ~f~~~ 149 (231)
T 3ctl_A 88 --PETI---NG-QAFRLIDEIRRHDMKVGLIL-------NPETP--VE---AMKYYIHKADKITVMTVDPGFAGQPFIPE 149 (231)
T ss_dssp --GGGC---TT-THHHHHHHHHHTTCEEEEEE-------CTTCC--GG---GGTTTGGGCSEEEEESSCTTCSSCCCCTT
T ss_pred --cccC---Cc-cHHHHHHHHHHcCCeEEEEE-------ECCCc--HH---HHHHHHhcCCEEEEeeeccCcCCccccHH
Confidence 1220 11 24688999999999999973 22233 22 11345678998874 3343222 344
Q ss_pred -HHHHHHHHHHHH
Q 010211 416 -LKAVKVMHTVAL 427 (515)
Q Consensus 416 -veaV~~m~~I~~ 427 (515)
.+=++.+++++.
T Consensus 150 ~l~kI~~lr~~~~ 162 (231)
T 3ctl_A 150 MLDKLAELKAWRE 162 (231)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 555555555544
No 182
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=62.38 E-value=14 Score=38.14 Aligned_cols=47 Identities=21% Similarity=0.379 Sum_probs=36.7
Q ss_pred EEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHH
Q 010211 103 IVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKE 149 (515)
Q Consensus 103 Ii~TiGPss~~~e~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~ 149 (515)
+-+.+|......+.++.++++|++++=||.+||..+.+.+.|+.+|+
T Consensus 99 vga~vg~~~~~~~~~~~lieaGvd~I~idta~G~~~~~~~~I~~ik~ 145 (366)
T 4fo4_A 99 VGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRA 145 (366)
T ss_dssp CEEECCSCTTCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHH
T ss_pred EEEEeccChhHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHH
Confidence 44455655577899999999999999999999988766666655554
No 183
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=61.85 E-value=36 Score=34.09 Aligned_cols=97 Identities=7% Similarity=0.103 Sum_probs=58.5
Q ss_pred HHhhcchhcCCcEEEec------ccCCHHHHHH-HHHHHHhcCCCceEEEEec---ChhhhhcHHHHHhh-cCeeEEcCC
Q 010211 271 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 339 (515)
Q Consensus 271 ~dI~~al~~gvD~ValS------fVrsa~dv~~-vr~~l~~~~~~i~IIaKIE---t~~aveNldeIl~~-sDgImIgrg 339 (515)
+.++|-++.|+|++.+. +.-+.++-.+ ++..++..+.++.||+-+= |.++++......+. +|++|+-+-
T Consensus 47 ~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P 126 (315)
T 3si9_A 47 NFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEKAGADAVLVVTP 126 (315)
T ss_dssp HHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 44567788999998742 1123333333 3444455577899999874 56666666665555 899998754
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcCCcEEEE
Q 010211 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (515)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aGKPvivA 371 (515)
...- +.-..+.+..-..+.+.+.|+++.
T Consensus 127 ~y~~----~~~~~l~~~f~~va~a~~lPiilY 154 (315)
T 3si9_A 127 YYNR----PNQRGLYTHFSSIAKAISIPIIIY 154 (315)
T ss_dssp CSSC----CCHHHHHHHHHHHHHHCSSCEEEE
T ss_pred CCCC----CCHHHHHHHHHHHHHcCCCCEEEE
Confidence 3321 122233444444455668999985
No 184
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=61.78 E-value=33 Score=30.97 Aligned_cols=59 Identities=22% Similarity=0.280 Sum_probs=42.9
Q ss_pred EEecCCEEEEEeec--CCC---CcceEEeccccccc--ccCcCCEEEEe--CCe-eEEEEEEEeCCeEE
Q 010211 180 ILKEGQEFNFTIKR--GVS---TEDTVSVNYDDFVN--DVEVGDILLVD--GGM-MSLAVKSKTKDLVK 238 (515)
Q Consensus 180 ~L~~G~~v~lt~~~--~~~---~~~~i~v~~~~l~~--~v~~Gd~IliD--DG~-I~l~V~~~~~~~v~ 238 (515)
-++.|++..|+... .++ .+....++...|.. .+++|+.+.+. +|. +..+|.+++++.+.
T Consensus 46 Gm~~Ge~~~v~ipp~~aYG~~~~~lv~~v~~~~f~~~~~~~~G~~~~~~~~~G~~~~~~V~~v~~~~v~ 114 (158)
T 3cgm_A 46 GREEGEAFQAHVPAEKAYGPHDPEGVQVVPLSAFPEDAEVVPGAQFYAQDMEGNPMPLTVVAVEGEEVT 114 (158)
T ss_dssp TCBTTCEEEEEECGGGTTCCCCGGGEEEEEGGGSCTTSCCCTTCEEEEEETTTEEEEEEEEEEETTEEE
T ss_pred CCCCCCEEEEEECcHHHcCCCCcceEEEEEHHHCCCCCCCccCCEEEEECCCCCEEEEEEEEECCCEEE
Confidence 46789999988762 333 33456677777764 68999999997 565 46789999988764
No 185
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=61.70 E-value=8.7 Score=36.26 Aligned_cols=59 Identities=19% Similarity=0.302 Sum_probs=43.6
Q ss_pred EEecCCEEEEEeec--CC---CCcceEEeccccccc--ccCcCCEEEEe--CCeeEEEEEEEeCCeEE
Q 010211 180 ILKEGQEFNFTIKR--GV---STEDTVSVNYDDFVN--DVEVGDILLVD--GGMMSLAVKSKTKDLVK 238 (515)
Q Consensus 180 ~L~~G~~v~lt~~~--~~---~~~~~i~v~~~~l~~--~v~~Gd~IliD--DG~I~l~V~~~~~~~v~ 238 (515)
-+++|++++|+... .+ ..+....++...|.. .+++|+.+.+. +|.+..+|++++++.|+
T Consensus 51 Gm~vGe~~~v~Ippe~aYGe~~~~lV~~vp~~~f~~~~~~~~G~~~~~~~~~G~~~~~V~~v~~~~V~ 118 (196)
T 2kfw_A 51 GHEVGDKFDVAVGANDAYGQYDENLVQRVPKDVFMGVDELQVGMRFLAETDQGPVPVEITAVEDDHVV 118 (196)
T ss_dssp SSCTTCEEEEECSTTTTSSCCCTTTCEEECGGGCCCSSCCCTTCEEEEEETTEEEEEEBCCCCSSSEE
T ss_pred CCCCCCEEEEEeCcHHhcCCCChhhEEEEEHHHCCCccCcccCCEEEEECCCCcEEEEEEEEcCCEEE
Confidence 47899999998763 22 334466777777764 58999999997 56677788888888764
No 186
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=61.63 E-value=43 Score=32.43 Aligned_cols=129 Identities=10% Similarity=0.088 Sum_probs=72.3
Q ss_pred HhhcchhcCCcEEEeccc-CCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh-cCeeEEcCCcccccCCCCC
Q 010211 272 DIKFGVDNQVDFYAVSFV-KDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIED 349 (515)
Q Consensus 272 dI~~al~~gvD~ValSfV-rsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDgImIgrgDLg~elg~e~ 349 (515)
++..+...|+|+|.+.-. -+ ++++++-++....| +.+++-+.+.+ .++..++. .|.|-+++-||. .++. +
T Consensus 120 qi~~a~~~GAD~VlL~~~~l~-~~l~~l~~~a~~lG--l~~lvev~~~~---E~~~a~~~gad~IGvn~~~l~-~~~~-d 191 (254)
T 1vc4_A 120 MLEEARAFGASAALLIVALLG-ELTGAYLEEARRLG--LEALVEVHTER---ELEIALEAGAEVLGINNRDLA-TLHI-N 191 (254)
T ss_dssp HHHHHHHTTCSEEEEEHHHHG-GGHHHHHHHHHHHT--CEEEEEECSHH---HHHHHHHHTCSEEEEESBCTT-TCCB-C
T ss_pred HHHHHHHcCCCEEEECccchH-HHHHHHHHHHHHCC--CeEEEEECCHH---HHHHHHHcCCCEEEEccccCc-CCCC-C
Confidence 456677889999887421 11 33433333322444 23333333333 23333333 688888887764 2232 2
Q ss_pred HHHHHHHHHHHHHhc--CCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecccccCCCCHHHHHHHH
Q 010211 350 VPLLQEDIIRRCRSM--QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVM 422 (515)
Q Consensus 350 v~~aqk~Ii~~c~~a--GKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ETa~G~yPveaV~~m 422 (515)
+ ..-+++....... ++|++. ..+.-|.+ |+..... |+|+++.-.---.+..|.++++.|
T Consensus 192 l-~~~~~L~~~i~~~~~~~~vIA---------egGI~s~~---dv~~l~~-Ga~gvlVGsAl~~~~d~~~~~~~l 252 (254)
T 1vc4_A 192 L-ETAPRLGRLARKRGFGGVLVA---------ESGYSRKE---ELKALEG-LFDAVLIGTSLMRAPDLEAALREL 252 (254)
T ss_dssp T-THHHHHHHHHHHTTCCSEEEE---------ESCCCSHH---HHHTTTT-TCSEEEECHHHHTSSCHHHHHHHH
T ss_pred H-HHHHHHHHhCccccCCCeEEE---------EcCCCCHH---HHHHHHc-CCCEEEEeHHHcCCCCHHHHHHHH
Confidence 2 2223444444433 567765 45665554 4556677 999999865555788898888765
No 187
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=61.14 E-value=1.1e+02 Score=30.33 Aligned_cols=131 Identities=11% Similarity=0.131 Sum_probs=74.8
Q ss_pred hhcchhcCCcEEEec-ccCCHH---HHHHHHHHHHhcCC-CceEEEEecChhh---------hhcHHHHHhh--cCeeEE
Q 010211 273 IKFGVDNQVDFYAVS-FVKDAK---VVHELKDYLKSCNA-DIHVIVKIESADS---------IPNLHSIISA--SDGAMV 336 (515)
Q Consensus 273 I~~al~~gvD~ValS-fVrsa~---dv~~vr~~l~~~~~-~i~IIaKIEt~~a---------veNldeIl~~--sDgImI 336 (515)
++.+++.|+|.|.+- |+.+.. .+.++++..+.+.+ .+++|+ |++.| +...-.++.. +|.|=.
T Consensus 131 ve~Av~~GAdaV~~~i~~Gs~~~~~~l~~i~~v~~~a~~~GlpvIi--e~~~G~~~~~d~e~i~~aariA~elGAD~VKt 208 (295)
T 3glc_A 131 MDDAVRLNSCAVAAQVYIGSEYEHQSIKNIIQLVDAGMKVGMPTMA--VTGVGKDMVRDQRYFSLATRIAAEMGAQIIKT 208 (295)
T ss_dssp HHHHHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHTTTCCEEE--EECC----CCSHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHCCCCEEEEEEECCCCcHHHHHHHHHHHHHHHHHcCCEEEE--ECCCCCccCCCHHHHHHHHHHHHHhCCCEEEe
Confidence 345667899987653 333332 22333344433322 355554 55432 1222233322 576655
Q ss_pred cCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCc-ChHH-HhHHHHHHHhCCcEEeecccccCCCC
Q 010211 337 ARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTP-TRAE-VSDIAIAVREGADAVMLSGETAHGKF 414 (515)
Q Consensus 337 grgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~P-trAE-v~DvanaV~~G~D~vmLs~ETa~G~y 414 (515)
. ++-+. .+++.+. ...||+++. +.. +..+ ...+..++..|++++..-...-....
T Consensus 209 ~-------~t~e~----~~~vv~~---~~vPVv~~G---------G~~~~~~~~l~~v~~ai~aGA~Gv~vGRnI~q~~d 265 (295)
T 3glc_A 209 Y-------YVEKG----FERIVAG---CPVPIVIAG---------GKKLPEREALEMCWQAIDQGASGVDMGRNIFQSDH 265 (295)
T ss_dssp E-------CCTTT----HHHHHHT---CSSCEEEEC---------CSCCCHHHHHHHHHHHHHTTCSEEEESHHHHTSSS
T ss_pred C-------CCHHH----HHHHHHh---CCCcEEEEE---------CCCCCHHHHHHHHHHHHHhCCeEEEeHHHHhcCcC
Confidence 4 11122 3445444 468998753 333 2223 66788999999999988766666678
Q ss_pred HHHHHHHHHHHHHH
Q 010211 415 PLKAVKVMHTVALR 428 (515)
Q Consensus 415 PveaV~~m~~I~~~ 428 (515)
|.+.++.+..++.+
T Consensus 266 p~~~~~al~~ivh~ 279 (295)
T 3glc_A 266 PVAMMKAVQAVVHH 279 (295)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC
Confidence 99999999988765
No 188
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=61.08 E-value=43 Score=33.94 Aligned_cols=97 Identities=14% Similarity=0.045 Sum_probs=60.0
Q ss_pred HHhhcchhcCCcEEEec------ccCCHHHHHH-HHHHHHhcCCCceEEEEec---ChhhhhcHHHHHhh-cCeeEEcCC
Q 010211 271 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 339 (515)
Q Consensus 271 ~dI~~al~~gvD~ValS------fVrsa~dv~~-vr~~l~~~~~~i~IIaKIE---t~~aveNldeIl~~-sDgImIgrg 339 (515)
+.++|-++.|+|+|.+. +.-+.++-.+ ++..++..+.++.||+-+= |.++++......+. +|++|+-+-
T Consensus 56 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P 135 (343)
T 2v9d_A 56 ALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHAQQAGADGIVVINP 135 (343)
T ss_dssp HHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 44577788999998762 2333333333 3444455567899999884 57777766666555 899998654
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcCCcEEEE
Q 010211 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (515)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aGKPvivA 371 (515)
...- +.-..+.+..-+.+.+.+.|+++.
T Consensus 136 ~Y~~----~s~~~l~~~f~~VA~a~~lPiilY 163 (343)
T 2v9d_A 136 YYWK----VSEANLIRYFEQVADSVTLPVMLY 163 (343)
T ss_dssp SSSC----CCHHHHHHHHHHHHHTCSSCEEEE
T ss_pred CCCC----CCHHHHHHHHHHHHHhcCCCEEEE
Confidence 3311 122333333334466678999884
No 189
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=61.07 E-value=54 Score=32.79 Aligned_cols=128 Identities=13% Similarity=0.138 Sum_probs=65.0
Q ss_pred CCCHhhHHHh--------hcchhcCCcEEEeccc-------------CC------------HHHHHHHHHHHHhcCCCce
Q 010211 264 SITDKDWEDI--------KFGVDNQVDFYAVSFV-------------KD------------AKVVHELKDYLKSCNADIH 310 (515)
Q Consensus 264 ~ltekD~~dI--------~~al~~gvD~ValSfV-------------rs------------a~dv~~vr~~l~~~~~~i~ 310 (515)
.||..|++.+ +.+.+.|+|+|=+-.. +. .+-+.++-+.+.++- +..
T Consensus 133 ~mt~~eI~~~i~~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v-~~p 211 (338)
T 1z41_A 133 EMSAEKVKETVQEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVW-DGP 211 (338)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSC
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHc-CCc
Confidence 4788887555 3446789999854322 11 111222222333322 577
Q ss_pred EEEEecCh------hhhhcHHHHHhh-----cCeeEEcCCccc-ccCCC-CC-HHHHHHHHHHHHHhcCCcEEEEecccc
Q 010211 311 VIVKIESA------DSIPNLHSIISA-----SDGAMVARGDLG-AELPI-ED-VPLLQEDIIRRCRSMQKPVIVATNMLE 376 (515)
Q Consensus 311 IIaKIEt~------~aveNldeIl~~-----sDgImIgrgDLg-~elg~-e~-v~~aqk~Ii~~c~~aGKPvivATqmLe 376 (515)
|..||--- ...++..++++. +|.|-+.-+... ...+. +. -....+++ .+..++|++..
T Consensus 212 v~vris~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~i---r~~~~iPVi~~----- 283 (338)
T 1z41_A 212 LFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKI---REQADMATGAV----- 283 (338)
T ss_dssp EEEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHH---HHHHCCEEEEC-----
T ss_pred EEEEecCcccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHH---HHHCCCCEEEE-----
Confidence 88898331 112233333332 798888765432 11111 11 11222333 23348898873
Q ss_pred ccccCCCcChHHHhHHHHHHHhC-CcEEeecc
Q 010211 377 SMIDHPTPTRAEVSDIAIAVREG-ADAVMLSG 407 (515)
Q Consensus 377 SMi~~~~PtrAEv~DvanaV~~G-~D~vmLs~ 407 (515)
...-+.. +...++..| +|.|++..
T Consensus 284 ----Ggi~s~~---~a~~~l~~G~aD~V~iGR 308 (338)
T 1z41_A 284 ----GMITDGS---MAEEILQNGRADLIFIGR 308 (338)
T ss_dssp ----SSCCSHH---HHHHHHHTTSCSEEEECH
T ss_pred ----CCCCCHH---HHHHHHHcCCceEEeecH
Confidence 3333332 344778888 99999853
No 190
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=60.67 E-value=59 Score=31.36 Aligned_cols=117 Identities=15% Similarity=0.168 Sum_probs=63.5
Q ss_pred HHhhcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhhcCeeEE--cCCcccccCCCC
Q 010211 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMV--ARGDLGAELPIE 348 (515)
Q Consensus 271 ~dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDgImI--grgDLg~elg~e 348 (515)
+.++.+.+.|+|++.++=+ ..+++..+.+++++.|-+ ++.-+.-....+.+.+|++.+++... +.-+. .|..
T Consensus 113 ~f~~~~~~aG~dgvii~dl-~~ee~~~~~~~~~~~gl~--~i~l~~p~t~~~rl~~ia~~a~gfiy~vs~~g~---TG~~ 186 (262)
T 2ekc_A 113 KFCRLSREKGIDGFIVPDL-PPEEAEELKAVMKKYVLS--FVPLGAPTSTRKRIKLICEAADEMTYFVSVTGT---TGAR 186 (262)
T ss_dssp HHHHHHHHTTCCEEECTTC-CHHHHHHHHHHHHHTTCE--ECCEECTTCCHHHHHHHHHHCSSCEEEESSCC--------
T ss_pred HHHHHHHHcCCCEEEECCC-CHHHHHHHHHHHHHcCCc--EEEEeCCCCCHHHHHHHHHhCCCCEEEEecCCc---cCCC
Confidence 3445566789999988744 346677777777776644 23333332445678888888665431 21111 1211
Q ss_pred -CHH-HHHHHHHHHHHh-cCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeec
Q 010211 349 -DVP-LLQEDIIRRCRS-MQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (515)
Q Consensus 349 -~v~-~aqk~Ii~~c~~-aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs 406 (515)
... .-..+.++..++ .+.|+.+.. +.-+.. ++.. +..|+|+++.-
T Consensus 187 ~~~~~~~~~~~v~~vr~~~~~pv~vG~---------GI~t~e---~~~~-~~~gADgvIVG 234 (262)
T 2ekc_A 187 EKLPYERIKKKVEEYRELCDKPVVVGF---------GVSKKE---HARE-IGSFADGVVVG 234 (262)
T ss_dssp ----CHHHHHHHHHHHHHCCSCEEEES---------SCCSHH---HHHH-HHTTSSEEEEC
T ss_pred CCcCcccHHHHHHHHHhhcCCCEEEeC---------CCCCHH---HHHH-HHcCCCEEEEC
Confidence 121 222334444444 378988743 333332 2334 77899999973
No 191
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=60.63 E-value=12 Score=38.51 Aligned_cols=50 Identities=14% Similarity=0.253 Sum_probs=39.8
Q ss_pred CeEEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHH
Q 010211 100 KTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKE 149 (515)
Q Consensus 100 ~TKIi~TiGPss~~~e~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~ 149 (515)
+..+.+.+|+.....+.++.++++|+++.=||++||+++...+.++.+|+
T Consensus 141 ~~~~~~~i~~~~~~~~~a~~~~~~G~d~i~i~~~~g~~~~~~e~i~~ir~ 190 (404)
T 1eep_A 141 KLRVGAAVSIDIDTIERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKT 190 (404)
T ss_dssp CBCCEEEECSCTTHHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHH
T ss_pred CceEEEEeCCChhHHHHHHHHHHCCCCEEEEeCCCCChHHHHHHHHHHHH
Confidence 34567778765566788999999999999999999998767777776665
No 192
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=60.60 E-value=22 Score=33.51 Aligned_cols=130 Identities=16% Similarity=0.199 Sum_probs=64.0
Q ss_pred cchhcCCcEEEecccCC---HHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh-cCeeEEcCCcc-cccCCC--
Q 010211 275 FGVDNQVDFYAVSFVKD---AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDL-GAELPI-- 347 (515)
Q Consensus 275 ~al~~gvD~ValSfVrs---a~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDgImIgrgDL-g~elg~-- 347 (515)
.+.+.|+|+|.+...++ .+++.+..+...+.| +.+++-|-+.+-.+ .+... .+.|-+.+.++ | .|.
T Consensus 77 ~~~~~Gad~Vll~~ser~l~~~e~~~~~~~a~~~G--l~~iv~v~~~~e~~---~~~~~~~~~i~~~~~~~iG--tG~~~ 149 (219)
T 2h6r_A 77 AIKDCGCKGTLINHSEKRMLLADIEAVINKCKNLG--LETIVCTNNINTSK---AVAALSPDCIAVEPPELIG--TGIPV 149 (219)
T ss_dssp HHHHHTCCEEEESBTTBCCBHHHHHHHHHHHHHHT--CEEEEEESSSHHHH---HHTTTCCSEEEECCCC----------
T ss_pred HHHHcCCCEEEECCccccCCHHHHHHHHHHHHHCC--CeEEEEeCCchHHH---HHHhCCCCEEEEEeccccc--cCCCC
Confidence 34467999999987532 334444444444443 44444443332222 22222 46666777776 2 231
Q ss_pred -CCHHHHHHHHHHHHHhc--CCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecccccCCCCHHHHHHHHH
Q 010211 348 -EDVPLLQEDIIRRCRSM--QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMH 423 (515)
Q Consensus 348 -e~v~~aqk~Ii~~c~~a--GKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ETa~G~yPveaV~~m~ 423 (515)
..-+...+.+.+..++. +.|++. ..+.-+.. ++..+...|+|+++.-+-.-.-.-|.+.++.+.
T Consensus 150 ~t~~~~~~~~~~~~ir~~~~~~~ii~---------ggGI~~~~---~~~~~~~~gaDgvlVGsAi~~~~d~~~~~~~l~ 216 (219)
T 2h6r_A 150 SKANPEVVEGTVRAVKEINKDVKVLC---------GAGISKGE---DVKAALDLGAEGVLLASGVVKAKNVEEAIRELI 216 (219)
T ss_dssp ------CSHHHHHHHHHHCTTCEEEE---------CSSCCSHH---HHHHHHTTTCCCEEESHHHHTCSSHHHHHHHHC
T ss_pred ccCCHHHHHHHHHHHHhccCCCeEEE---------EeCcCcHH---HHHHHhhCCCCEEEEcHHHhCcccHHHHHHHHH
Confidence 10011011333333333 567766 33333322 334566779999998544445566777776553
No 193
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=60.47 E-value=1.2e+02 Score=29.14 Aligned_cols=92 Identities=24% Similarity=0.269 Sum_probs=54.5
Q ss_pred HHHHHhh-cCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcE
Q 010211 324 LHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADA 402 (515)
Q Consensus 324 ldeIl~~-sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~ 402 (515)
+..+.+. +|.|+.-.++.+..-+... +...+++.+ ...+|+++. .+.-+.. |+..++..|+|+
T Consensus 140 a~~~~~~gad~v~~~~~~~Gt~~~~~~-~~~l~~i~~---~~~iPviv~---------gGI~t~e---da~~~~~~GAdg 203 (264)
T 1xm3_A 140 ARKLEELGVHAIMPGASPIGSGQGILN-PLNLSFIIE---QAKVPVIVD---------AGIGSPK---DAAYAMELGADG 203 (264)
T ss_dssp HHHHHHHTCSCBEECSSSTTCCCCCSC-HHHHHHHHH---HCSSCBEEE---------SCCCSHH---HHHHHHHTTCSE
T ss_pred HHHHHHhCCCEEEECCcccCCCCCCCC-HHHHHHHHh---cCCCCEEEE---------eCCCCHH---HHHHHHHcCCCE
Confidence 4444444 5666442344443333323 334444433 457899884 3443332 456778899999
Q ss_pred EeecccccCCCCHHHHHHHHHHHHHHHhc
Q 010211 403 VMLSGETAHGKFPLKAVKVMHTVALRTES 431 (515)
Q Consensus 403 vmLs~ETa~G~yPveaV~~m~~I~~~aE~ 431 (515)
++..+--....-|.++++.+.+.+++...
T Consensus 204 ViVGSAi~~a~dp~~~~~~l~~~v~~~~~ 232 (264)
T 1xm3_A 204 VLLNTAVSGADDPVKMARAMKLAVEAGRL 232 (264)
T ss_dssp EEESHHHHTSSSHHHHHHHHHHHHHHHHH
T ss_pred EEEcHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 99875444446688998888877766554
No 194
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=59.97 E-value=51 Score=31.17 Aligned_cols=127 Identities=15% Similarity=0.072 Sum_probs=59.1
Q ss_pred HHHhhcchhcCCcEEEecccCCH-H--HHHHHHHHHHhcC---CCceEEE---------EecChh--------hhhcHHH
Q 010211 270 WEDIKFGVDNQVDFYAVSFVKDA-K--VVHELKDYLKSCN---ADIHVIV---------KIESAD--------SIPNLHS 326 (515)
Q Consensus 270 ~~dI~~al~~gvD~ValSfVrsa-~--dv~~vr~~l~~~~---~~i~IIa---------KIEt~~--------aveNlde 326 (515)
.+++..+++.|+|+|.++-. .. . +...++++++..+ +.+.+-. ++++.. ..+-+..
T Consensus 86 ~~~i~~~~~~Gad~v~lg~~-~~~~~~~~~~~~~~~~~~g~~~~~i~~~~d~~~~~g~~~v~~~g~~~~~~~~~~e~~~~ 164 (266)
T 2w6r_A 86 MEHFLEAFLAGADKALAASV-FHFREIDMRELKEYLKKHGGSGQAVVVAIDAKRVDGEFMVFTHSGKKNTGILLRDWVVE 164 (266)
T ss_dssp THHHHHHHHHTCSEEECCCC-C------CHHHHHHCC----CCCEEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHH
T ss_pred HHHHHHHHHcCCcHhhhhHH-HHhCCCCHHHHHHHHHHcCCCCCEEEEEEEEEecCCCEEEEECCCceecchhHHHHHHH
Confidence 34556666789999887632 11 1 4455666655544 2221111 123221 1222333
Q ss_pred HHhh-cCeeEEcC--CcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEE
Q 010211 327 IISA-SDGAMVAR--GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAV 403 (515)
Q Consensus 327 Il~~-sDgImIgr--gDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~v 403 (515)
+.+. ++.|++-. -|. ...|+ + ....++ .+...+.|++. ..+.-+.. |+..+...|+|++
T Consensus 165 ~~~~G~~~i~~t~~~~~g-~~~g~-~-~~~i~~---l~~~~~ipvia---------~GGI~~~e---d~~~~~~~Gadgv 226 (266)
T 2w6r_A 165 VEKRGAGEILLTSIDRDG-TKSGY-D-TEMIRF---VRPLTTLPIIA---------SGGAGKME---HFLEAFLAGADAA 226 (266)
T ss_dssp HHHTTCSEEEEEETTTTT-TCSCC-C-HHHHHH---HGGGCCSCEEE---------ESCCCSHH---HHHHHHHHTCSEE
T ss_pred HHHcCCCEEEEEeecCCC-CcCCC-C-HHHHHH---HHHHcCCCEEE---------eCCCCCHH---HHHHHHHcCCHHH
Confidence 3334 78887732 121 12232 2 222233 33445899987 34554444 4445556799999
Q ss_pred eecccccCCCCH
Q 010211 404 MLSGETAHGKFP 415 (515)
Q Consensus 404 mLs~ETa~G~yP 415 (515)
++..---.+.++
T Consensus 227 ~vgsal~~~~~~ 238 (266)
T 2w6r_A 227 LAASVFHFREID 238 (266)
T ss_dssp EESTTTC-----
T ss_pred HccHHHHcCCCC
Confidence 986443344433
No 195
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=59.80 E-value=58 Score=32.25 Aligned_cols=97 Identities=13% Similarity=0.143 Sum_probs=59.6
Q ss_pred HHhhcchhcCCcEEEe------cccCCHHHHHH-HHHHHHhcCCCceEEEEec---ChhhhhcHHHHHhh-cCeeEEcCC
Q 010211 271 EDIKFGVDNQVDFYAV------SFVKDAKVVHE-LKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 339 (515)
Q Consensus 271 ~dI~~al~~gvD~Val------SfVrsa~dv~~-vr~~l~~~~~~i~IIaKIE---t~~aveNldeIl~~-sDgImIgrg 339 (515)
+.++|-++.|+|++.+ ++.-+.++-.+ ++...+..+.+++||+-+= |.++++....-.+. +|++|+-+-
T Consensus 37 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P 116 (306)
T 1o5k_A 37 RLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVTP 116 (306)
T ss_dssp HHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHHhcCCCEEEECCC
Confidence 4456778899999876 22334433333 3444455567899999884 46777766665555 899998654
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcCCcEEEE
Q 010211 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (515)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aGKPvivA 371 (515)
...- +.-..+.+..-+.|.+.+.|+++.
T Consensus 117 ~y~~----~s~~~l~~~f~~va~a~~lPiilY 144 (306)
T 1o5k_A 117 YYNK----PTQEGLYQHYKYISERTDLGIVVY 144 (306)
T ss_dssp CSSC----CCHHHHHHHHHHHHTTCSSCEEEE
T ss_pred CCCC----CCHHHHHHHHHHHHHhCCCCEEEE
Confidence 3311 122333334444466678999884
No 196
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=59.76 E-value=48 Score=33.06 Aligned_cols=97 Identities=13% Similarity=0.127 Sum_probs=57.7
Q ss_pred HHhhcchhcCCcEEEec------ccCCHHHHHH-HHHHHHhcCCCceEEEEec--ChhhhhcHHHHHhh-cCeeEEcCCc
Q 010211 271 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKIE--SADSIPNLHSIISA-SDGAMVARGD 340 (515)
Q Consensus 271 ~dI~~al~~gvD~ValS------fVrsa~dv~~-vr~~l~~~~~~i~IIaKIE--t~~aveNldeIl~~-sDgImIgrgD 340 (515)
+.++|-++.|+|++.+. +.-+.++-.+ ++..++..+.+++||+-+= |.++++......+. +|++|+-+-.
T Consensus 37 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~st~~ai~la~~A~~~Gadavlv~~P~ 116 (314)
T 3d0c_A 37 DNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIGYSVDTAIELGKSAIDSGADCVMIHQPV 116 (314)
T ss_dssp HHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHHTTCSEEEECCCC
T ss_pred HHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCCcCHHHHHHHHHHHHHcCCCEEEECCCC
Confidence 44567788999998652 2233333333 3444555667899999885 45555555554444 8999997543
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcCCcEEEE
Q 010211 341 LGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (515)
Q Consensus 341 Lg~elg~e~v~~aqk~Ii~~c~~aGKPvivA 371 (515)
..- +.-..+.+..-+.|.+.+.|+++.
T Consensus 117 y~~----~s~~~l~~~f~~va~a~~lPiilY 143 (314)
T 3d0c_A 117 HPY----ITDAGAVEYYRNIIEALDAPSIIY 143 (314)
T ss_dssp CSC----CCHHHHHHHHHHHHHHSSSCEEEE
T ss_pred CCC----CCHHHHHHHHHHHHHhCCCCEEEE
Confidence 311 122233334444466678999985
No 197
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=59.34 E-value=57 Score=32.12 Aligned_cols=117 Identities=13% Similarity=0.147 Sum_probs=67.7
Q ss_pred HHhhcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecChh-hhhcHHHHHhhcCeeE-E-cCCcccccCCC
Q 010211 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESAD-SIPNLHSIISASDGAM-V-ARGDLGAELPI 347 (515)
Q Consensus 271 ~dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~-aveNldeIl~~sDgIm-I-grgDLg~elg~ 347 (515)
+.++.+.+.|+|++.++=.. .++..++++++++.|-+...++ ++. ..+.+.+|.+.+.|.+ . .+-+ -.|.
T Consensus 116 ~f~~~~~~aGvdGvIipDlp-~ee~~~~~~~~~~~gl~~I~lv---ap~t~~eri~~i~~~~~gfiY~vs~~G---vTG~ 188 (271)
T 3nav_A 116 DFYQRCQKAGVDSVLIADVP-TNESQPFVAAAEKFGIQPIFIA---PPTASDETLRAVAQLGKGYTYLLSRAG---VTGA 188 (271)
T ss_dssp HHHHHHHHHTCCEEEETTSC-GGGCHHHHHHHHHTTCEEEEEE---CTTCCHHHHHHHHHHCCSCEEECCCC--------
T ss_pred HHHHHHHHCCCCEEEECCCC-HHHHHHHHHHHHHcCCeEEEEE---CCCCCHHHHHHHHHHCCCeEEEEeccC---CCCc
Confidence 34456668899998887442 3556677888877765532222 332 3578889988875543 2 2211 1122
Q ss_pred C-CHHHHHHHHHHHHHhc-CCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeec
Q 010211 348 E-DVPLLQEDIIRRCRSM-QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (515)
Q Consensus 348 e-~v~~aqk~Ii~~c~~a-GKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs 406 (515)
. .++.-..+.++..+++ ..|+++. -+.-+.. ++..++..|+|+++.-
T Consensus 189 ~~~~~~~~~~~v~~vr~~~~~Pv~vG---------fGIst~e---~~~~~~~~gADgvIVG 237 (271)
T 3nav_A 189 ETKANMPVHALLERLQQFDAPPALLG---------FGISEPA---QVKQAIEAGAAGAISG 237 (271)
T ss_dssp ---CCHHHHHHHHHHHHTTCCCEEEC---------SSCCSHH---HHHHHHHTTCSEEEES
T ss_pred ccCCchhHHHHHHHHHHhcCCCEEEE---------CCCCCHH---HHHHHHHcCCCEEEEC
Confidence 1 1233345555665554 6799883 3443433 3445788999999974
No 198
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=59.32 E-value=79 Score=31.83 Aligned_cols=127 Identities=17% Similarity=0.193 Sum_probs=65.2
Q ss_pred CCCHhhHHHh--------hcchhcCCcEEEeccc-------------CCHH---------H---HHHHHHHHHhcCCCce
Q 010211 264 SITDKDWEDI--------KFGVDNQVDFYAVSFV-------------KDAK---------V---VHELKDYLKSCNADIH 310 (515)
Q Consensus 264 ~ltekD~~dI--------~~al~~gvD~ValSfV-------------rsa~---------d---v~~vr~~l~~~~~~i~ 310 (515)
.||..|++.+ +.+.+.|+|+|=+-.. +... . +.++-+.+.+.- +..
T Consensus 133 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v-~~p 211 (340)
T 3gr7_A 133 EMTKADIEETVQAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVW-DGP 211 (340)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSC
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhc-CCc
Confidence 5788888777 2345679999876433 1111 1 222222233322 567
Q ss_pred EEEEecChh------hhhcHHHHHhh-----cCeeEEcCCccccc-CCC-CCHHHHHHHHHHH-HHhcCCcEEEEecccc
Q 010211 311 VIVKIESAD------SIPNLHSIISA-----SDGAMVARGDLGAE-LPI-EDVPLLQEDIIRR-CRSMQKPVIVATNMLE 376 (515)
Q Consensus 311 IIaKIEt~~------aveNldeIl~~-----sDgImIgrgDLg~e-lg~-e~v~~aqk~Ii~~-c~~aGKPvivATqmLe 376 (515)
|.+||---+ -+++.-++++. +|.|-+--|.+.-. ++. +. .+...++. .+..++||+...
T Consensus 212 v~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~---~~~~~~~~ik~~~~iPVi~~G---- 284 (340)
T 3gr7_A 212 LFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPG---YQVPFAELIRREADIPTGAVG---- 284 (340)
T ss_dssp EEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTT---TTHHHHHHHHHHTTCCEEEES----
T ss_pred eEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCcc---ccHHHHHHHHHHcCCcEEeeC----
Confidence 888885321 13344444443 78888854432211 111 11 11222222 234589998743
Q ss_pred ccccCCCcChHHHhHHHHHHHhC-CcEEeec
Q 010211 377 SMIDHPTPTRAEVSDIAIAVREG-ADAVMLS 406 (515)
Q Consensus 377 SMi~~~~PtrAEv~DvanaV~~G-~D~vmLs 406 (515)
..-+.. +...++..| +|.|++.
T Consensus 285 -----gI~s~e---~a~~~L~~G~aD~V~iG 307 (340)
T 3gr7_A 285 -----LITSGW---QAEEILQNGRADLVFLG 307 (340)
T ss_dssp -----SCCCHH---HHHHHHHTTSCSEEEEC
T ss_pred -----CCCCHH---HHHHHHHCCCeeEEEec
Confidence 222222 233778888 9999985
No 199
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A*
Probab=59.17 E-value=22 Score=35.68 Aligned_cols=55 Identities=20% Similarity=0.399 Sum_probs=36.9
Q ss_pred CCCHHHHHHHHHhCCcEEEEecCCCCh----------HHHHHHHHHHHHHHhhcCCceEEEEEecCCC
Q 010211 111 TSSREMIWKLAEEGMNVARLNMSHGDH----------ASHQKTIDLVKEYNSQFEDKAVAIMLDTKGP 168 (515)
Q Consensus 111 s~~~e~i~~li~aGm~v~RiN~SHg~~----------e~~~~~i~~ir~~~~~~~~~~i~I~lDL~GP 168 (515)
..+.+.|+.|-+.|+|++||-++.... +...+.++.+=+...+.| +.+++|+-.-
T Consensus 42 ~~t~~di~~i~~~G~n~vRipi~w~~~~~~~~~~~~~~~~l~~l~~~v~~a~~~G---i~vildlH~~ 106 (345)
T 3ndz_A 42 MTTHAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDND---MYVIINLHHE 106 (345)
T ss_dssp CCCHHHHHHHHHHTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTT---CEEEECCCSC
T ss_pred CCcHHHHHHHHHCCCCEEEEeeehHHhCCCCCCCccCHHHHHHHHHHHHHHHHCC---CEEEEecCCc
Confidence 346899999999999999999875421 223333443333344444 7889998664
No 200
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=59.04 E-value=25 Score=34.11 Aligned_cols=151 Identities=17% Similarity=0.104 Sum_probs=84.8
Q ss_pred CCCCHhhHHHh-hcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh-cCeeEEcCC-
Q 010211 263 PSITDKDWEDI-KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARG- 339 (515)
Q Consensus 263 p~ltekD~~dI-~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDgImIgrg- 339 (515)
|.-|..|.+.+ +.+.++|++.|+++ +..+..++ +|+ +..+.|.+=|=-|.|-...+.-+.. -+++--|--
T Consensus 24 p~~t~~~i~~lc~eA~~~~~~aVcV~----p~~v~~a~-~l~--~~~v~v~tVigFP~G~~~~~~K~~E~~~Ai~~GAdE 96 (231)
T 3ndo_A 24 PEATPSDVTALVDEAADLGVFAVCVS----PPLVSVAA-GVA--PSGLAIAAVAGFPSGKHVPGIKATEAELAVAAGATE 96 (231)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHHHHH-HHC--CTTCEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSE
T ss_pred CCCCHHHHHHHHHHHHHhCCcEEEEC----HHHHHHHH-Hhc--CCCCeEEEEecCCCCCCcHHHHHHHHHHHHHcCCCE
Confidence 67788888555 77888999998874 45566666 663 4567777767666665544433322 122222222
Q ss_pred -cccccCCC------CCHHHHHHHHHHHHHhcCCc--EEEEeccccccccCCCcChHHHhHHHH-HHHhCCcEEeecccc
Q 010211 340 -DLGAELPI------EDVPLLQEDIIRRCRSMQKP--VIVATNMLESMIDHPTPTRAEVSDIAI-AVREGADAVMLSGET 409 (515)
Q Consensus 340 -DLg~elg~------e~v~~aqk~Ii~~c~~aGKP--vivATqmLeSMi~~~~PtrAEv~Dvan-aV~~G~D~vmLs~ET 409 (515)
|.-+.+|. +.+..-.+.+.++|. |+| ||+-|-.|+ ...|..|+..... +...|+|.|=-|.-=
T Consensus 97 IDmVinig~lk~g~~~~v~~ei~~v~~a~~--~~~lKvIiEt~~L~-----~~~t~eei~~a~~ia~~aGADfVKTSTGf 169 (231)
T 3ndo_A 97 IDMVIDVGAALAGDLDAVSADITAVRKAVR--AATLKVIVESAALL-----EFSGEPLLADVCRVARDAGADFVKTSTGF 169 (231)
T ss_dssp EEEECCHHHHHTTCHHHHHHHHHHHHHHTT--TSEEEEECCHHHHH-----HHTCHHHHHHHHHHHHHTTCSEEECCCSC
T ss_pred EEEEeehHhhhcccHHHHHHHHHHHHHHcc--CCceEEEEECcccC-----CCCCHHHHHHHHHHHHHHCcCEEEcCCCC
Confidence 12223332 234444555555664 444 344333331 1136677666655 445799998765221
Q ss_pred c-CCCCHHHHHHHHHHHHH
Q 010211 410 A-HGKFPLKAVKVMHTVAL 427 (515)
Q Consensus 410 a-~G~yPveaV~~m~~I~~ 427 (515)
. .|---+|.|+.|++.+.
T Consensus 170 ~~~~gAt~edv~lm~~~v~ 188 (231)
T 3ndo_A 170 HPSGGASVQAVEIMARTVG 188 (231)
T ss_dssp CTTCSCCHHHHHHHHHHHT
T ss_pred CCCCCCCHHHHHHHHHHhC
Confidence 1 12233689999998863
No 201
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=58.93 E-value=15 Score=37.75 Aligned_cols=45 Identities=27% Similarity=0.363 Sum_probs=34.9
Q ss_pred EEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHH
Q 010211 103 IVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKE 149 (515)
Q Consensus 103 Ii~TiGPss~~~e~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~ 149 (515)
+.+-+|... .+.++.++++|++++=||++||..+.+.+.++.+|+
T Consensus 98 vga~ig~~~--~e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~ 142 (361)
T 3khj_A 98 VGAAIGVNE--IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKS 142 (361)
T ss_dssp CEEEECTTC--HHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHHHH
T ss_pred EEEEeCCCH--HHHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHH
Confidence 344455433 889999999999999999999988766666666664
No 202
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=58.76 E-value=59 Score=31.79 Aligned_cols=116 Identities=16% Similarity=0.219 Sum_probs=71.0
Q ss_pred HhhcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhhcCeeE--EcCCcccccCCCC-
Q 010211 272 DIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAM--VARGDLGAELPIE- 348 (515)
Q Consensus 272 dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDgIm--IgrgDLg~elg~e- 348 (515)
-++.+.+.|+|++.++=. -.++..++++..++.|-+...++-=.| ..+.+.+|.+.++|.+ +.+ .| -.|..
T Consensus 108 F~~~~~~aGvdG~IipDL-P~eE~~~~~~~~~~~Gl~~I~lvaP~t--~~eRi~~ia~~a~gFiY~Vs~--~G-vTG~~~ 181 (252)
T 3tha_A 108 FVKKAKSLGICALIVPEL-SFEESDDLIKECERYNIALITLVSVTT--PKERVKKLVKHAKGFIYLLAS--IG-ITGTKS 181 (252)
T ss_dssp HHHHHHHTTEEEEECTTC-CGGGCHHHHHHHHHTTCEECEEEETTS--CHHHHHHHHTTCCSCEEEECC--SC-SSSCSH
T ss_pred HHHHHHHcCCCEEEeCCC-CHHHHHHHHHHHHHcCCeEEEEeCCCC--cHHHHHHHHHhCCCeEEEEec--CC-CCCccc
Confidence 445667889999998865 345567788888777655332232222 3578899998887663 321 01 12332
Q ss_pred CHHHHHHHHHHHHHhc-CCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeec
Q 010211 349 DVPLLQEDIIRRCRSM-QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (515)
Q Consensus 349 ~v~~aqk~Ii~~c~~a-GKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs 406 (515)
.+....+..++..+++ ++|+++.. +.-+...+. .+..++|++..-
T Consensus 182 ~~~~~~~~~v~~vr~~~~~Pv~vGf---------GIst~e~a~----~~~~~ADGVIVG 227 (252)
T 3tha_A 182 VEEAILQDKVKEIRSFTNLPIFVGF---------GIQNNQDVK----RMRKVADGVIVG 227 (252)
T ss_dssp HHHHHHHHHHHHHHTTCCSCEEEES---------SCCSHHHHH----HHTTTSSEEEEC
T ss_pred CCCHHHHHHHHHHHHhcCCcEEEEc---------CcCCHHHHH----HHHhcCCEEEEC
Confidence 3444456777777765 67998843 444444332 344579999864
No 203
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=58.76 E-value=58 Score=31.98 Aligned_cols=97 Identities=12% Similarity=0.123 Sum_probs=58.6
Q ss_pred HHhhcchhcCCcEEEec------ccCCHHHHHH-HHHHHHhcCCCceEEEEec---ChhhhhcHHHHHhh-cCeeEEcCC
Q 010211 271 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 339 (515)
Q Consensus 271 ~dI~~al~~gvD~ValS------fVrsa~dv~~-vr~~l~~~~~~i~IIaKIE---t~~aveNldeIl~~-sDgImIgrg 339 (515)
+.++|-++.|+|++.+. +.-+.++-.+ ++...+..+.++.||+-+= |.++++....-.+. +|++|+-+-
T Consensus 25 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 104 (292)
T 2vc6_A 25 DLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLIVSP 104 (292)
T ss_dssp HHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 44577788999998752 2233333333 3444455567889999884 46677666665555 899998754
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcCCcEEEE
Q 010211 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (515)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aGKPvivA 371 (515)
...- +.-..+.+..-+.+.+.+.|+++.
T Consensus 105 ~y~~----~s~~~l~~~f~~ia~a~~lPiilY 132 (292)
T 2vc6_A 105 YYNK----PTQEGIYQHFKAIDAASTIPIIVY 132 (292)
T ss_dssp CSSC----CCHHHHHHHHHHHHHHCSSCEEEE
T ss_pred CCCC----CCHHHHHHHHHHHHHhCCCCEEEE
Confidence 3311 122333333334456678999884
No 204
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=58.62 E-value=33 Score=33.91 Aligned_cols=132 Identities=13% Similarity=0.152 Sum_probs=76.7
Q ss_pred CCCCHhhHHHhhcchhcCCcEEEecccC-------------CHHHHHHHHHHHHhcCCCceEEEEecC------hhhhhc
Q 010211 263 PSITDKDWEDIKFGVDNQVDFYAVSFVK-------------DAKVVHELKDYLKSCNADIHVIVKIES------ADSIPN 323 (515)
Q Consensus 263 p~ltekD~~dI~~al~~gvD~ValSfVr-------------sa~dv~~vr~~l~~~~~~i~IIaKIEt------~~aveN 323 (515)
..+|-+|.--.+.+-+.|+|.+.++..- +-+++..--..+.+..+..+|++=.+- .++++|
T Consensus 20 ~~~tayD~~sA~l~e~aG~d~ilvGdsl~~~~lG~~dt~~vtldemi~h~~aV~r~~~~~~vvaD~pfgsy~~~~~a~~~ 99 (264)
T 1m3u_A 20 ATITAYDYSFAKLFADEGLNVMLVGDSLGMTVQGHDSTLPVTVADIAYHTAAVRRGAPNCLLLADLPFMAYATPEQAFEN 99 (264)
T ss_dssp EEEECCSHHHHHHHHHHTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCTTSEEEEECCTTSSSSHHHHHHH
T ss_pred EEEeCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCcCHHHHHHHHHHHHhhCCCCcEEEECCCCCcCCHHHHHHH
Confidence 3445667655555557799998876311 113332222334444455677777664 356777
Q ss_pred HHHHHhh-cCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEE----EEecc---ccccccCCC-cChHH--HhHH
Q 010211 324 LHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVI----VATNM---LESMIDHPT-PTRAE--VSDI 392 (515)
Q Consensus 324 ldeIl~~-sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvi----vATqm---LeSMi~~~~-PtrAE--v~Dv 392 (515)
...+++. +++|-+-=| + -+...|+++.++|+||+ +.-|- +......++ ..+++ +.|.
T Consensus 100 a~rl~kaGa~aVklEgg--------~----e~~~~I~al~~agipV~gHiGLtPq~v~~~ggf~v~grt~~~a~~~i~rA 167 (264)
T 1m3u_A 100 AATVMRAGANMVKIEGG--------E----WLVETVQMLTERAVPVCGHLGLTPQSVNIFGGYKVQGRGDEAGDQLLSDA 167 (264)
T ss_dssp HHHHHHTTCSEEECCCS--------G----GGHHHHHHHHHTTCCEEEEEESCGGGHHHHTSSCCCCCSHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECCc--------H----HHHHHHHHHHHCCCCeEeeecCCceeecccCCeEEEeCCHHHHHHHHHHH
Confidence 7788876 788887533 1 23455666778999987 11111 111111222 22333 6777
Q ss_pred HHHHHhCCcEEeec
Q 010211 393 AIAVREGADAVMLS 406 (515)
Q Consensus 393 anaV~~G~D~vmLs 406 (515)
-.+...|+|+++|=
T Consensus 168 ~a~~eAGA~~ivlE 181 (264)
T 1m3u_A 168 LALEAAGAQLLVLE 181 (264)
T ss_dssp HHHHHHTCCEEEEE
T ss_pred HHHHHCCCcEEEEe
Confidence 78888999999994
No 205
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=58.35 E-value=40 Score=30.06 Aligned_cols=60 Identities=15% Similarity=0.105 Sum_probs=43.1
Q ss_pred EEecCCEEEEEeec--CCC---CcceEEecccccc-cccCcCCEEEEe--CCe-eEEEEEEEeCCeEEE
Q 010211 180 ILKEGQEFNFTIKR--GVS---TEDTVSVNYDDFV-NDVEVGDILLVD--GGM-MSLAVKSKTKDLVKC 239 (515)
Q Consensus 180 ~L~~G~~v~lt~~~--~~~---~~~~i~v~~~~l~-~~v~~Gd~IliD--DG~-I~l~V~~~~~~~v~~ 239 (515)
-+++|++..|+... .++ .+....++...|- ..+++|+.+.+. ||. +..+|++++++.|+.
T Consensus 56 gm~~Ge~~~v~ipp~~aYG~~~~~~v~~v~~~~f~~~~~~~G~~~~~~~~~G~~~~~~V~~v~~~~v~v 124 (151)
T 2kr7_A 56 KAQIGEWEEVVIAPEEAYGVYESSYLQEVPRDQFEGIELEKGMSVFGQTEDNQTIQAIIKDFSATHVMV 124 (151)
T ss_dssp TCCBTCEEEEEECGGGTTCSSCSCEEEEEEGGGGTTSCCCTTCEEEEEETTTEEEEEEEEEECSSEEEE
T ss_pred CCCCCCEEEEEEecHHHcCCCCcceEEEEcHHHcCCCCCccCCEEEEECCCCCEEEEEEEEECCCEEEE
Confidence 46789999988752 233 3345667766662 368999999986 575 677899999888653
No 206
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=57.98 E-value=1.8e+02 Score=30.36 Aligned_cols=163 Identities=11% Similarity=0.095 Sum_probs=94.4
Q ss_pred CceeeeCCCccCCCCCCHhhHHHhh-cchhcCCcEEEecc-cCCHHHHHHHHHHHHhcCCCceEEEEe-cChhhhhcHHH
Q 010211 250 RRHLNVRGKSANLPSITDKDWEDIK-FGVDNQVDFYAVSF-VKDAKVVHELKDYLKSCNADIHVIVKI-ESADSIPNLHS 326 (515)
Q Consensus 250 ~KgVnlpg~~~~lp~ltekD~~dI~-~al~~gvD~ValSf-Vrsa~dv~~vr~~l~~~~~~i~IIaKI-Et~~aveNlde 326 (515)
|-|-.-|+.. ++..|+-.|. .-.+.|+|.|=+.| ..++.+...++... +.+.+..+.+.+ .+.++ ++.
T Consensus 48 RDG~Q~~~~~-----~s~eeKl~Ia~~L~~~Gv~~IEvG~P~asp~d~~~~~~i~-~~~~~~~v~~~~r~~~~d---i~~ 118 (423)
T 3ivs_A 48 REGEQFANAF-----FDTEKKIQIAKALDNFGVDYIELTSPVASEQSRQDCEAIC-KLGLKCKILTHIRCHMDD---ARV 118 (423)
T ss_dssp TGGGGSTTCC-----CCHHHHHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHH-TSCCSSEEEEEEESCHHH---HHH
T ss_pred CCCCCCCCCC-----cCHHHHHHHHHHHHHcCCCEEEEeecccCHHHHHHHHHHH-hcCCCCEEEEeeccChhh---HHH
Confidence 3344445443 4667775554 44567999998854 45666666666544 445555555432 23333 233
Q ss_pred HHhh-cCe--eEEcCCcccc----cCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHH-HHHh
Q 010211 327 IISA-SDG--AMVARGDLGA----ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAI-AVRE 398 (515)
Q Consensus 327 Il~~-sDg--ImIgrgDLg~----elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~Dvan-aV~~ 398 (515)
.++. +|. ++++-.|+-. ....+++.....++++.++++|..|.+... +. . +.+...+.+++. +...
T Consensus 119 A~~aG~~~V~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~V~~~~e--da--~--r~d~~~~~~v~~~~~~~ 192 (423)
T 3ivs_A 119 AVETGVDGVDVVIGTSQYLRKYSHGKDMTYIIDSATEVINFVKSKGIEVRFSSE--DS--F--RSDLVDLLSLYKAVDKI 192 (423)
T ss_dssp HHHTTCSEEEEEEEC-------------CHHHHHHHHHHHHHHTTTCEEEEEEE--SG--G--GSCHHHHHHHHHHHHHH
T ss_pred HHHcCCCEEEEEeeccHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCCEEEEEEc--cC--c--CCCHHHHHHHHHHHHHh
Confidence 3333 454 4445445422 223467778888999999999999977421 11 1 222233444444 4567
Q ss_pred CCcEEeecccccCCCCHHHHHHHHHHHHHH
Q 010211 399 GADAVMLSGETAHGKFPLKAVKVMHTVALR 428 (515)
Q Consensus 399 G~D~vmLs~ETa~G~yPveaV~~m~~I~~~ 428 (515)
|+|.+-|. +|.=...|-+.-+.+..+..+
T Consensus 193 Ga~~i~l~-DTvG~~~P~~v~~lv~~l~~~ 221 (423)
T 3ivs_A 193 GVNRVGIA-DTVGCATPRQVYDLIRTLRGV 221 (423)
T ss_dssp CCSEEEEE-ETTSCCCHHHHHHHHHHHHHH
T ss_pred CCCccccC-CccCcCCHHHHHHHHHHHHhh
Confidence 99998885 888888898888777777654
No 207
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=57.81 E-value=1.7e+02 Score=29.88 Aligned_cols=155 Identities=14% Similarity=0.120 Sum_probs=92.9
Q ss_pred CCCHhhHHHhh-cchhcCCcEEEecc-cCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh-cC--eeEEcC
Q 010211 264 SITDKDWEDIK-FGVDNQVDFYAVSF-VKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SD--GAMVAR 338 (515)
Q Consensus 264 ~ltekD~~dI~-~al~~gvD~ValSf-Vrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sD--gImIgr 338 (515)
.++..|+..|. .-.+.|+|.|=+.| ..++.+...++. +.+.+.+..+.+-.-. -.++++..++. +| .++++-
T Consensus 21 ~~~~~~k~~ia~~L~~~Gv~~IE~g~p~~~~~~~~~~~~-i~~~~~~~~v~~~~r~--~~~di~~a~~~g~~~v~i~~~~ 97 (382)
T 2ztj_A 21 NFSTQDKVEIAKALDEFGIEYIEVTTPVASPQSRKDAEV-LASLGLKAKVVTHIQC--RLDAAKVAVETGVQGIDLLFGT 97 (382)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHH-HHTSCCSSEEEEEEES--CHHHHHHHHHTTCSEEEEEECC
T ss_pred CcCHHHHHHHHHHHHHcCcCEEEEcCCcCCHHHHHHHHH-HHhcCCCcEEEEEccc--ChhhHHHHHHcCCCEEEEEecc
Confidence 45777876654 34457999998876 345566555544 4444555555553211 12334444444 45 344555
Q ss_pred Cccccc-C--CCCCHHHHHHHHHHHHHhcC--CcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecccccCCC
Q 010211 339 GDLGAE-L--PIEDVPLLQEDIIRRCRSMQ--KPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGK 413 (515)
Q Consensus 339 gDLg~e-l--g~e~v~~aqk~Ii~~c~~aG--KPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ETa~G~ 413 (515)
.|+-.. + ..+++....+..++.++++| ..|.+.- .....-+...+.+++.++.+-+|.+.|. +|.=..
T Consensus 98 s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~~------ed~~~~~~~~~~~~~~~~~~~a~~i~l~-DT~G~~ 170 (382)
T 2ztj_A 98 SKYLRAPHGRDIPRIIEEAKEVIAYIREAAPHVEVRFSA------EDTFRSEEQDLLAVYEAVAPYVDRVGLA-DTVGVA 170 (382)
T ss_dssp --------CCCHHHHHHHHHHHHHHHHHHCTTSEEEEEE------TTTTTSCHHHHHHHHHHHGGGCSEEEEE-ETTSCC
T ss_pred CHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEEEE------EeCCCCCHHHHHHHHHHHHHhcCEEEec-CCCCCC
Confidence 553222 1 23566777889999999999 6665432 1233344445667777666558988885 888788
Q ss_pred CHHHHHHHHHHHHHH
Q 010211 414 FPLKAVKVMHTVALR 428 (515)
Q Consensus 414 yPveaV~~m~~I~~~ 428 (515)
.|-+.-+.+..+...
T Consensus 171 ~P~~~~~lv~~l~~~ 185 (382)
T 2ztj_A 171 TPRQVYALVREVRRV 185 (382)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHh
Confidence 899988888887765
No 208
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A*
Probab=57.80 E-value=18 Score=34.90 Aligned_cols=53 Identities=19% Similarity=0.263 Sum_probs=36.6
Q ss_pred CCHHHHHHHH-HhCCcEEEEecCCC---------ChHHHHHHHHHHHHHHhhcCCceEEEEEecCC
Q 010211 112 SSREMIWKLA-EEGMNVARLNMSHG---------DHASHQKTIDLVKEYNSQFEDKAVAIMLDTKG 167 (515)
Q Consensus 112 ~~~e~i~~li-~aGm~v~RiN~SHg---------~~e~~~~~i~~ir~~~~~~~~~~i~I~lDL~G 167 (515)
-+.+.++.|. +.|+|++|+-+... +++...+.++.+=+...+.| +.+++|+-+
T Consensus 39 ~~~~di~~~~~~~G~N~vRi~~~~~~~~~~~~~~~p~~~~~~ld~~v~~a~~~G---i~vild~h~ 101 (293)
T 1tvn_A 39 YTAETVAKAKTEFNATLIRAAIGHGTSTGGSLNFDWEGNMSRLDTVVNAAIAED---MYVIIDFHS 101 (293)
T ss_dssp CSHHHHHHHHHHHCCSEEEEEEECCTTSTTSTTTCHHHHHHHHHHHHHHHHHTT---CEEEEEEEC
T ss_pred CCHHHHHHHHHhcCCCEEEEeccccCCCCCccccChHHHHHHHHHHHHHHHHCC---CEEEEEcCC
Confidence 4678899998 49999999988752 22444555555555556666 667788754
No 209
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=57.70 E-value=15 Score=39.39 Aligned_cols=51 Identities=14% Similarity=0.236 Sum_probs=42.0
Q ss_pred CCeEEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHH
Q 010211 99 RKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKE 149 (515)
Q Consensus 99 r~TKIi~TiGPss~~~e~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~ 149 (515)
.+..+-+.+|...+..+.++.|+++|+++.=+|.+||..+...+.++.+|+
T Consensus 243 ~rl~V~aavg~~~d~~era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~ 293 (511)
T 3usb_A 243 GRLLVGAAVGVTADAMTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRA 293 (511)
T ss_dssp SCBCCEEEECSSTTHHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHH
T ss_pred cceeeeeeeeeccchHHHHHHHHhhccceEEecccccchhhhhhHHHHHHH
Confidence 355677888888888999999999999999999999988776666666654
No 210
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=57.52 E-value=39 Score=31.01 Aligned_cols=60 Identities=20% Similarity=0.375 Sum_probs=44.0
Q ss_pred EEecCCEEEEEeec--CCC---CcceEEeccccccc--ccCcCCEEEEe--CCe-eEEEEEEEeCCeEEE
Q 010211 180 ILKEGQEFNFTIKR--GVS---TEDTVSVNYDDFVN--DVEVGDILLVD--GGM-MSLAVKSKTKDLVKC 239 (515)
Q Consensus 180 ~L~~G~~v~lt~~~--~~~---~~~~i~v~~~~l~~--~v~~Gd~IliD--DG~-I~l~V~~~~~~~v~~ 239 (515)
-.+.|++..|+... .+| .+....++...|.. .+++|+.+.+. ||. +..+|++++++.|+.
T Consensus 74 gm~~Ge~~~v~Ipp~~AYG~~~~~lv~~vp~~~f~~~~~~~~G~~~~~~~~~G~~~~~~V~~v~~~~V~v 143 (169)
T 4dt4_A 74 GLKVGDKTTFSLEPDAAFGVPSPDLIQYFSRREFMDAGEPEIGAIMLFTAMDGSEMPGVIREINGDSITV 143 (169)
T ss_dssp TCCTTCEEEEEECGGGTTCCCCGGGEEEEEGGGGTTTCCCCTTCEEEEECTTSCEEEEEEEEEETTEEEE
T ss_pred CCCCCCEEEEEEChHHhcCCCChHHEEEeCHHHCCCcCCCCCCcEEEEECCCCCEEEEEEEEEcCCEEEE
Confidence 46789999998763 333 34466777777764 58999999996 454 778999999988654
No 211
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=57.32 E-value=70 Score=31.78 Aligned_cols=95 Identities=15% Similarity=0.099 Sum_probs=58.1
Q ss_pred HHhhcchhcCCcEEEec------ccCCHHHHHH-HHHHHHhcCCCceEEEEe---cChhhhhcHHHHHhh-cCeeEEcCC
Q 010211 271 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKI---ESADSIPNLHSIISA-SDGAMVARG 339 (515)
Q Consensus 271 ~dI~~al~~gvD~ValS------fVrsa~dv~~-vr~~l~~~~~~i~IIaKI---Et~~aveNldeIl~~-sDgImIgrg 339 (515)
+.++|-++.|+|++.+. +.-+.++-.+ ++..++.. .++.||+-+ -|.++++......+. +|++|+-+-
T Consensus 33 ~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~-grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 111 (313)
T 3dz1_A 33 RLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRA-KSMQVIVGVSAPGFAAMRRLARLSMDAGAAGVMIAPP 111 (313)
T ss_dssp HHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHC-TTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHc-CCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 44577889999998762 2223333333 34445555 689999987 456666666665555 899999765
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcC--CcEEEE
Q 010211 340 DLGAELPIEDVPLLQEDIIRRCRSMQ--KPVIVA 371 (515)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aG--KPvivA 371 (515)
.. - +.-..+.+..-+.|.+.+ .|+++.
T Consensus 112 ~~--~---~s~~~l~~~f~~va~a~~~~lPiilY 140 (313)
T 3dz1_A 112 PS--L---RTDEQITTYFRQATEAIGDDVPWVLQ 140 (313)
T ss_dssp TT--C---CSHHHHHHHHHHHHHHHCTTSCEEEE
T ss_pred CC--C---CCHHHHHHHHHHHHHhCCCCCcEEEE
Confidence 41 1 222333444444455556 898884
No 212
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=56.93 E-value=86 Score=32.09 Aligned_cols=33 Identities=15% Similarity=0.187 Sum_probs=21.5
Q ss_pred HhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhC-CcEEeecc
Q 010211 362 RSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREG-ADAVMLSG 407 (515)
Q Consensus 362 ~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G-~D~vmLs~ 407 (515)
+..++||+... .. +. .+...++..| +|+|++..
T Consensus 296 ~~~~iPvi~~G---------gi-~~---~~a~~~l~~g~aD~V~igR 329 (377)
T 2r14_A 296 QRFKGGLIYCG---------NY-DA---GRAQARLDDNTADAVAFGR 329 (377)
T ss_dssp HHCCSEEEEES---------SC-CH---HHHHHHHHTTSCSEEEESH
T ss_pred HHCCCCEEEEC---------CC-CH---HHHHHHHHCCCceEEeecH
Confidence 35578988743 22 32 2344778888 99999853
No 213
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=56.82 E-value=62 Score=30.75 Aligned_cols=116 Identities=18% Similarity=0.227 Sum_probs=70.7
Q ss_pred HHhhcchhcCCcEEEe-----cccCCH----HHHHHHHHHHHhcCCCce--EEEEecChhhhhcHHHHHhh-cCeeEEcC
Q 010211 271 EDIKFGVDNQVDFYAV-----SFVKDA----KVVHELKDYLKSCNADIH--VIVKIESADSIPNLHSIISA-SDGAMVAR 338 (515)
Q Consensus 271 ~dI~~al~~gvD~Val-----SfVrsa----~dv~~vr~~l~~~~~~i~--IIaKIEt~~aveNldeIl~~-sDgImIgr 338 (515)
++++...+.|+|++-+ .||.+- .-++.+|+.. +.+.. +=.++++++. -++..++. +|.|-+..
T Consensus 21 ~~i~~l~~~g~d~~h~DVmDg~Fvpn~~~G~~~v~~ir~~~---~~~~~~dvhLmv~~p~~--~i~~~~~aGad~itvH~ 95 (228)
T 3ovp_A 21 AECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQL---GQDPFFDMHMMVSKPEQ--WVKPMAVAGANQYTFHL 95 (228)
T ss_dssp HHHHHHHHTTCSCEEEEEEBSSSSSCBCBCHHHHHHHHHHH---CSSSCEEEEEECSCGGG--GHHHHHHHTCSEEEEEG
T ss_pred HHHHHHHHcCCCEEEEEecCCCcCcccccCHHHHHHHHHhh---CCCCcEEEEEEeCCHHH--HHHHHHHcCCCEEEEcc
Confidence 4555566789999888 776543 4455555543 22333 3347888864 47777777 89999951
Q ss_pred CcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEee-cccccCCC
Q 010211 339 GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVML-SGETAHGK 413 (515)
Q Consensus 339 gDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmL-s~ETa~G~ 413 (515)
|-+ +. ..+.++.++++|+.++++. ...+|- | .+ ..+....|.+++ |-+...|-
T Consensus 96 -----Ea~-~~----~~~~i~~i~~~G~k~gval-------~p~t~~--e--~l-~~~l~~~D~Vl~msv~pGf~G 149 (228)
T 3ovp_A 96 -----EAT-EN----PGALIKDIRENGMKVGLAI-------KPGTSV--E--YL-APWANQIDMALVMTVEPGFGG 149 (228)
T ss_dssp -----GGC-SC----HHHHHHHHHHTTCEEEEEE-------CTTSCG--G--GT-GGGGGGCSEEEEESSCTTTCS
T ss_pred -----CCc-hh----HHHHHHHHHHcCCCEEEEE-------cCCCCH--H--HH-HHHhccCCeEEEeeecCCCCC
Confidence 212 22 3567788899999999974 222332 2 11 234456888875 43544443
No 214
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=56.46 E-value=77 Score=31.14 Aligned_cols=106 Identities=15% Similarity=0.223 Sum_probs=58.0
Q ss_pred eeeCCCccCCCCCCHhhHHHhhcchhcCCcE--EEecc---------cCCHHH-----------HHHHHHHHHhcCCCce
Q 010211 253 LNVRGKSANLPSITDKDWEDIKFGVDNQVDF--YAVSF---------VKDAKV-----------VHELKDYLKSCNADIH 310 (515)
Q Consensus 253 Vnlpg~~~~lp~ltekD~~dI~~al~~gvD~--ValSf---------Vrsa~d-----------v~~vr~~l~~~~~~i~ 310 (515)
.-+|-.....|.+. .-.+.++...+.|+|+ +++|| ++.+.. +-++-.-+++.+.+++
T Consensus 21 ali~yi~aGdP~~~-~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~~P 99 (271)
T 3nav_A 21 AFVPFVTIGDPNPE-QSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPETP 99 (271)
T ss_dssp EEEEEEETTSSCHH-HHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSC
T ss_pred eEEEEEeCCCCCHH-HHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCC
Confidence 33444444455542 2345555556789997 46677 332211 1111122333334677
Q ss_pred EEEEe-cCh---hhhhcHHHHH-hh-cCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEE
Q 010211 311 VIVKI-ESA---DSIPNLHSII-SA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVI 369 (515)
Q Consensus 311 IIaKI-Et~---~aveNldeIl-~~-sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvi 369 (515)
++.+. .++ -|++++-+-+ +. +||+++. || ++++ ..+..+.|+++|...+
T Consensus 100 ivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIip--Dl----p~ee----~~~~~~~~~~~gl~~I 154 (271)
T 3nav_A 100 IGLLMYANLVYARGIDDFYQRCQKAGVDSVLIA--DV----PTNE----SQPFVAAAEKFGIQPI 154 (271)
T ss_dssp EEEEECHHHHHHTCHHHHHHHHHHHTCCEEEET--TS----CGGG----CHHHHHHHHHTTCEEE
T ss_pred EEEEecCcHHHHHhHHHHHHHHHHCCCCEEEEC--CC----CHHH----HHHHHHHHHHcCCeEE
Confidence 77662 222 3556553333 33 8999994 55 4444 5678889999998755
No 215
>3icg_A Endoglucanase D; cellulase, xylanase, carbohydrate binding DOM glucanase, carbohydrate metabolism, cellulose degradation, glycosidase; HET: BTB; 2.10A {Clostridium cellulovorans}
Probab=56.30 E-value=24 Score=37.42 Aligned_cols=54 Identities=19% Similarity=0.376 Sum_probs=35.8
Q ss_pred CCHHHHHHHHHhCCcEEEEecCCCC----------hHHHHHHHHHHHHHHhhcCCceEEEEEecCCC
Q 010211 112 SSREMIWKLAEEGMNVARLNMSHGD----------HASHQKTIDLVKEYNSQFEDKAVAIMLDTKGP 168 (515)
Q Consensus 112 ~~~e~i~~li~aGm~v~RiN~SHg~----------~e~~~~~i~~ir~~~~~~~~~~i~I~lDL~GP 168 (515)
.+.+.|+.|-+.|+|++||-++... .+...+.++.+=+...+.| +.+++||-..
T Consensus 46 ~t~~di~~i~~~G~N~vRipi~w~~~~~~~~~~~~~~~~l~~~d~vv~~a~~~G---i~vildlH~~ 109 (515)
T 3icg_A 46 TTHAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDND---MYVIINLHHE 109 (515)
T ss_dssp CCHHHHHHHHHHTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTT---CEEEEECCSC
T ss_pred CCHHHHHHHHHCCCCEEEEccchHHhCCCCCCCccCHHHHHHHHHHHHHHHHCC---CEEEEecCCC
Confidence 3689999999999999999887532 1222233333333334444 8889998665
No 216
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=55.88 E-value=29 Score=36.47 Aligned_cols=100 Identities=11% Similarity=0.078 Sum_probs=56.8
Q ss_pred CCCCHhhHHHh-hcchhcCCcEEEecccCC---------------------HHHHHHHHHHHHhcCCCceEEE--EecCh
Q 010211 263 PSITDKDWEDI-KFGVDNQVDFYAVSFVKD---------------------AKVVHELKDYLKSCNADIHVIV--KIESA 318 (515)
Q Consensus 263 p~ltekD~~dI-~~al~~gvD~ValSfVrs---------------------a~dv~~vr~~l~~~~~~i~IIa--KIEt~ 318 (515)
|.+++.|..++ +.+.+.|+|+|.++--.. +..++.++++-+..+.++.||+ -|.|.
T Consensus 278 pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg~GGI~s~ 357 (415)
T 3i65_A 278 PDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSG 357 (415)
T ss_dssp SCCCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEECSSCCSH
T ss_pred CCCCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEEEECCCCCH
Confidence 56777777666 455678999999874211 1112233443333455788886 45554
Q ss_pred hhhhcHHHHHhhcCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCC
Q 010211 319 DSIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQK 366 (515)
Q Consensus 319 ~aveNldeIl~~sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGK 366 (515)
+-+ ++-|..=+|+|+|||+=+.- |..-+..+.+.+-+...+.|.
T Consensus 358 eDa--~e~l~aGAd~VqIgra~l~~--GP~~~~~i~~~L~~~l~~~G~ 401 (415)
T 3i65_A 358 LDA--LEKIEAGASVCQLYSCLVFN--GMKSAVQIKRELNHLLYQRGY 401 (415)
T ss_dssp HHH--HHHHHHTEEEEEESHHHHHH--GGGHHHHHHHHHHHHHHHTTC
T ss_pred HHH--HHHHHcCCCEEEEcHHHHhc--CHHHHHHHHHHHHHHHHHcCC
Confidence 332 22232228999999986522 333344555666555666554
No 217
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=55.19 E-value=64 Score=32.12 Aligned_cols=97 Identities=11% Similarity=0.088 Sum_probs=60.8
Q ss_pred HHhhcchhcCCcEEEec------ccCCHHHHHH-HHHHHHhcCCCceEEEEe---cChhhhhcHHHHHhh-c-CeeEEcC
Q 010211 271 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKI---ESADSIPNLHSIISA-S-DGAMVAR 338 (515)
Q Consensus 271 ~dI~~al~~gvD~ValS------fVrsa~dv~~-vr~~l~~~~~~i~IIaKI---Et~~aveNldeIl~~-s-DgImIgr 338 (515)
+.++|-++.|+|++.+. +.-+.++-.+ ++..++..+.++.||+-+ -|.++++......+. . |++|+.+
T Consensus 32 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Ga~davlv~~ 111 (311)
T 3h5d_A 32 ALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVGTNDTRDSIEFVKEVAEFGGFAAGLAIV 111 (311)
T ss_dssp HHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCCSSHHHHHHHHHHHHHSCCCSEEEEEC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHhcCCCcEEEEcC
Confidence 55577789999998752 1123333333 344455667789999987 366777766666665 4 9999875
Q ss_pred CcccccCCCCCHHHHHHHHHHHHHhcCCcEEEE
Q 010211 339 GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (515)
Q Consensus 339 gDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivA 371 (515)
--..- +.-..+.+..-..+.+.+.|+++.
T Consensus 112 P~y~~----~s~~~l~~~f~~va~a~~lPiilY 140 (311)
T 3h5d_A 112 PYYNK----PSQEGMYQHFKAIADASDLPIIIY 140 (311)
T ss_dssp CCSSC----CCHHHHHHHHHHHHHSCSSCEEEE
T ss_pred CCCCC----CCHHHHHHHHHHHHHhCCCCEEEE
Confidence 43321 222344455555566679999985
No 218
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=54.92 E-value=70 Score=31.23 Aligned_cols=129 Identities=10% Similarity=0.038 Sum_probs=65.1
Q ss_pred hhH-HHhhcchhcCCc---EEEeccc-----------CCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh--
Q 010211 268 KDW-EDIKFGVDNQVD---FYAVSFV-----------KDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-- 330 (515)
Q Consensus 268 kD~-~dI~~al~~gvD---~ValSfV-----------rsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-- 330 (515)
+|. +.++.+.+.|+| +|-+.|- .+.+.+.++-+.+.+. -++.|++|+=.--..+++.++++.
T Consensus 106 ~~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~-~~~Pv~vK~~~~~~~~~~~~~a~~~~ 184 (314)
T 2e6f_A 106 EENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLA-YGLPFGVKMPPYFDIAHFDTAAAVLN 184 (314)
T ss_dssp HHHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHH-HCSCEEEEECCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHh-cCCCEEEEECCCCCHHHHHHHHHHHH
Confidence 444 444555667889 8877653 1333333332223221 147899998432222344444432
Q ss_pred ----cCeeEEcCCc-----ccc-----------cC----CCCCHHHHHHHHHHHHHhc-CCcEEEEeccccccccCCCcC
Q 010211 331 ----SDGAMVARGD-----LGA-----------EL----PIEDVPLLQEDIIRRCRSM-QKPVIVATNMLESMIDHPTPT 385 (515)
Q Consensus 331 ----sDgImIgrgD-----Lg~-----------el----g~e~v~~aqk~Ii~~c~~a-GKPvivATqmLeSMi~~~~Pt 385 (515)
+|+|.+.-.- +.. +. |....+.....+-+..+.. +.|++.. .+.-+
T Consensus 185 ~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~~~ipvi~~---------GGI~~ 255 (314)
T 2e6f_A 185 EFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRCPDKLVFGC---------GGVYS 255 (314)
T ss_dssp TCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHCTTSEEEEE---------SSCCS
T ss_pred hcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhcCCCCEEEE---------CCCCC
Confidence 6777654211 100 00 1111233333333333444 7888873 33333
Q ss_pred hHHHhHHHHHHHhCCcEEeecccc
Q 010211 386 RAEVSDIAIAVREGADAVMLSGET 409 (515)
Q Consensus 386 rAEv~DvanaV~~G~D~vmLs~ET 409 (515)
..|+..++..|+|+|++..--
T Consensus 256 ---~~da~~~l~~GAd~V~ig~~~ 276 (314)
T 2e6f_A 256 ---GEDAFLHILAGASMVQVGTAL 276 (314)
T ss_dssp ---HHHHHHHHHHTCSSEEECHHH
T ss_pred ---HHHHHHHHHcCCCEEEEchhh
Confidence 236668888999999986443
No 219
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=54.69 E-value=30 Score=34.49 Aligned_cols=147 Identities=12% Similarity=0.110 Sum_probs=81.9
Q ss_pred CCCCHhhHHHh-hcchhc--CCcEEEecccCCHHHHHHHHHHHHhcCC--CceEEEEecChhhhhcHHHHHhh-------
Q 010211 263 PSITDKDWEDI-KFGVDN--QVDFYAVSFVKDAKVVHELKDYLKSCNA--DIHVIVKIESADSIPNLHSIISA------- 330 (515)
Q Consensus 263 p~ltekD~~dI-~~al~~--gvD~ValSfVrsa~dv~~vr~~l~~~~~--~i~IIaKIEt~~aveNldeIl~~------- 330 (515)
|.-|+.|.+.+ +.+.++ |++.|+++ +..+...+++++..+. .+.|.+-|==|.|-.+.+..+..
T Consensus 43 p~~T~~dI~~lc~eA~~~~~~~aaVCV~----p~~V~~a~~~L~~~gs~~~v~v~tVigFP~G~~~~~~Kv~E~~~Av~~ 118 (281)
T 2a4a_A 43 ENGTEDDIRELCNESVKTCPFAAAVCVY----PKFVKFINEKIKQEINPFKPKIACVINFPYGTDSMEKVLNDTEKALDD 118 (281)
T ss_dssp TTCCHHHHHHHHHHHHSSSSCCSEEEEC----GGGHHHHHHHHHHHSSSCCSEEEEEESTTTCCSCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhccCCccEEEEC----HHHHHHHHHHhhccCCCCCceEEEEeCCCCCCCCHHHHHHHHHHHHHc
Confidence 56688887555 677888 99988764 4556677788863233 67777777444444444432222
Q ss_pred -cCeeEEcCCcccccCCC------C---CHHHHHHHHHHHHHhcCCcE--EEEeccccccccCCCcChHH-HhHH-HHHH
Q 010211 331 -SDGAMVARGDLGAELPI------E---DVPLLQEDIIRRCRSMQKPV--IVATNMLESMIDHPTPTRAE-VSDI-AIAV 396 (515)
Q Consensus 331 -sDgImIgrgDLg~elg~------e---~v~~aqk~Ii~~c~~aGKPv--ivATqmLeSMi~~~~PtrAE-v~Dv-anaV 396 (515)
+|.|=+ -+.+|. + .+..-.+.+.++|. ++|+ |+.|-.| +..| +... --++
T Consensus 119 GAdEIDm-----Vinig~lksg~~~~~~~v~~eI~~v~~a~~--~~~lKVIlEt~~L---------~d~e~i~~A~~ia~ 182 (281)
T 2a4a_A 119 GADEIDL-----VINYKKIIENTDEGLKEATKLTQSVKKLLT--NKILKVIIEVGEL---------KTEDLIIKTTLAVL 182 (281)
T ss_dssp TCSEEEE-----ECCHHHHHHSHHHHHHHHHHHHHHHHTTCT--TSEEEEECCHHHH---------CSHHHHHHHHHHHH
T ss_pred CCCEEEE-----ecchHhhhCCChhHHHHHHHHHHHHHHHhc--CCceEEEEecccC---------CcHHHHHHHHHHHH
Confidence 344421 122221 1 33333333433443 3553 5544333 4455 3232 3456
Q ss_pred HhCCcEEeecccccCCCCHHHHHHHHHHHHHHH
Q 010211 397 REGADAVMLSGETAHGKFPLKAVKVMHTVALRT 429 (515)
Q Consensus 397 ~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~a 429 (515)
..|+|.|=-|.-=.-|.--++.|+.|.+.+++.
T Consensus 183 eaGADfVKTSTGf~~~gAT~edv~lm~~~v~~~ 215 (281)
T 2a4a_A 183 NGNADFIKTSTGKVQINATPSSVEYIIKAIKEY 215 (281)
T ss_dssp TTTCSEEECCCSCSSCCCCHHHHHHHHHHHHHH
T ss_pred HhCCCEEEeCCCCCCCCCCHHHHHHHHHHHHHh
Confidence 789999876522121333469999999998765
No 220
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=54.58 E-value=52 Score=32.29 Aligned_cols=97 Identities=12% Similarity=0.070 Sum_probs=57.8
Q ss_pred HHhhcchhcCCcEEEec------ccCCHHHHHH-HHHHHHhcCCCceEEEEec---ChhhhhcHHHHHhh-cCeeEEcCC
Q 010211 271 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 339 (515)
Q Consensus 271 ~dI~~al~~gvD~ValS------fVrsa~dv~~-vr~~l~~~~~~i~IIaKIE---t~~aveNldeIl~~-sDgImIgrg 339 (515)
+.++|-++.|+|++.+. +.-+.++-.+ ++..++..+.+++||+-+= |.++++......+. +|++|+-+-
T Consensus 26 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 105 (292)
T 2ojp_A 26 KLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTP 105 (292)
T ss_dssp HHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHTTTSSCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHhcCCCEEEECCC
Confidence 45577788999998762 2233333333 3444555567899999884 35666555554444 899998754
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcCCcEEEE
Q 010211 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (515)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aGKPvivA 371 (515)
...- +.-..+.+..-+.+.+.+.|+++.
T Consensus 106 ~y~~----~s~~~l~~~f~~ia~a~~lPiilY 133 (292)
T 2ojp_A 106 YYNR----PSQEGLYQHFKAIAEHTDLPQILY 133 (292)
T ss_dssp CSSC----CCHHHHHHHHHHHHTTCSSCEEEE
T ss_pred CCCC----CCHHHHHHHHHHHHHhcCCCEEEE
Confidence 3311 122333334444456678999984
No 221
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=54.31 E-value=18 Score=38.42 Aligned_cols=50 Identities=18% Similarity=0.392 Sum_probs=41.3
Q ss_pred CeEEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHH
Q 010211 100 KTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKE 149 (515)
Q Consensus 100 ~TKIi~TiGPss~~~e~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~ 149 (515)
+..+-+.+|...+..+.++.|+++|+++.=||.+||......+.++.+|+
T Consensus 217 rl~v~aavG~~~~~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~ 266 (490)
T 4avf_A 217 RLRVGAAVGTGADTGERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQ 266 (490)
T ss_dssp CBCCEEEECSSTTHHHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHHHHH
T ss_pred cceeeeeeccccchHHHHHHHhhcccceEEecccCCcchhHHHHHHHHHH
Confidence 45566677887788999999999999999999999988776666666664
No 222
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=54.27 E-value=1.1e+02 Score=28.51 Aligned_cols=98 Identities=11% Similarity=-0.006 Sum_probs=60.6
Q ss_pred HHhhcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEE-ec---------------ChhhhhcHHHHHhh----
Q 010211 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVK-IE---------------SADSIPNLHSIISA---- 330 (515)
Q Consensus 271 ~dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaK-IE---------------t~~aveNldeIl~~---- 330 (515)
+.++.+.+.|.|+|-+.+ ....++.++++.+++.|-.+..+.- .- ..++++.+.+.++.
T Consensus 27 ~~l~~~~~~G~~~vEl~~-~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~i~~A~~l 105 (269)
T 3ngf_A 27 ERFRLAAEAGFGGVEFLF-PYDFDADVIARELKQHNLTQVLFNMPPGDWAAGERGMAAISGREQEFRDNVDIALHYALAL 105 (269)
T ss_dssp HHHHHHHHTTCSEEECSC-CTTSCHHHHHHHHHHTTCEEEEEECCCSCTTTTCCBCTTCTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCEEEecC-CccCCHHHHHHHHHHcCCcEEEEecCCCccccCCCCcCCCccHHHHHHHHHHHHHHHHHHc
Confidence 456777889999998765 3345678899999887655443321 00 01344555555554
Q ss_pred -cCeeEEcCCcccccCC----CCCHHHHHHHHHHHHHhcCCcEEE
Q 010211 331 -SDGAMVARGDLGAELP----IEDVPLLQEDIIRRCRSMQKPVIV 370 (515)
Q Consensus 331 -sDgImIgrgDLg~elg----~e~v~~aqk~Ii~~c~~aGKPviv 370 (515)
++.|.+.+| ..-... ++.+....+++.+.|.+.|..+.+
T Consensus 106 Ga~~v~~~~g-~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~l 149 (269)
T 3ngf_A 106 DCRTLHAMSG-ITEGLDRKACEETFIENFRYAADKLAPHGITVLV 149 (269)
T ss_dssp TCCEEECCBC-BCTTSCHHHHHHHHHHHHHHHHHHHGGGTCEEEE
T ss_pred CCCEEEEccC-CCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 577777777 322221 134556667788888888877665
No 223
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=54.11 E-value=16 Score=38.78 Aligned_cols=51 Identities=16% Similarity=0.257 Sum_probs=40.7
Q ss_pred CeEEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHH
Q 010211 100 KTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEY 150 (515)
Q Consensus 100 ~TKIi~TiGPss~~~e~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~~ 150 (515)
+-.+.+.+|......+.++.++++|+++.=||++||.+....+.++.+|+.
T Consensus 243 rl~vga~vG~~~~~~~~a~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~ 293 (514)
T 1jcn_A 243 QLLCGAAVGTREDDKYRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQK 293 (514)
T ss_dssp CBCCEEEECSSTTHHHHHHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHH
T ss_pred ceeeeeEecCchhhHHHHHHHHHcCCCEEEeeccCCcchhHHHHHHHHHHh
Confidence 344566778777778999999999999999999999987666777766653
No 224
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=53.52 E-value=64 Score=30.14 Aligned_cols=128 Identities=13% Similarity=0.120 Sum_probs=64.2
Q ss_pred HHHhhcchhcCCcEEEecc--cCCHHHHHHHHHHHHhcCCCceEEE-----EecCh--------hhhhcHHHHHhh-cCe
Q 010211 270 WEDIKFGVDNQVDFYAVSF--VKDAKVVHELKDYLKSCNADIHVIV-----KIESA--------DSIPNLHSIISA-SDG 333 (515)
Q Consensus 270 ~~dI~~al~~gvD~ValSf--Vrsa~dv~~vr~~l~~~~~~i~IIa-----KIEt~--------~aveNldeIl~~-sDg 333 (515)
.++++.+++.|+|+|.++- ..+++. +.++ ...++.+.+-+ ++++. ...+-+..+.+. ++.
T Consensus 85 ~~~~~~~~~~Gad~V~lg~~~l~~p~~---~~~~-~~~g~~i~~~~d~~~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~ 160 (241)
T 1qo2_A 85 LDYAEKLRKLGYRRQIVSSKVLEDPSF---LKSL-REIDVEPVFSLDTRGGRVAFKGWLAEEEIDPVSLLKRLKEYGLEE 160 (241)
T ss_dssp HHHHHHHHHTTCCEEEECHHHHHCTTH---HHHH-HTTTCEEEEEEEEETTEECCTTCSSCSCCCHHHHHHHHHTTTCCE
T ss_pred HHHHHHHHHCCCCEEEECchHhhChHH---HHHH-HHcCCcEEEEEEecCCEEEECCceecCCCCHHHHHHHHHhCCCCE
Confidence 4456666678999887752 122222 3444 44443333322 23332 111222233333 677
Q ss_pred eEEcCC--cccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHh-----C-CcEEee
Q 010211 334 AMVARG--DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVRE-----G-ADAVML 405 (515)
Q Consensus 334 ImIgrg--DLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~-----G-~D~vmL 405 (515)
|++-.- | +...|. + ....+++. +...+|++. ..+.-+...+. .+... | +|+++.
T Consensus 161 i~~t~~~~~-g~~~g~-~-~~~i~~l~---~~~~iPvia---------~GGI~~~~d~~---~~~~~~~~~~G~adgv~v 222 (241)
T 1qo2_A 161 IVHTEIEKD-GTLQEH-D-FSLTKKIA---IEAEVKVLA---------AGGISSENSLK---TAQKVHTETNGLLKGVIV 222 (241)
T ss_dssp EEEEETTHH-HHTCCC-C-HHHHHHHH---HHHTCEEEE---------ESSCCSHHHHH---HHHHHHHHTTTSEEEEEE
T ss_pred EEEEeeccc-ccCCcC-C-HHHHHHHH---HhcCCcEEE---------ECCCCCHHHHH---HHHhcccccCCeEeEEEe
Confidence 777421 1 111232 2 23334443 334899987 34555545444 44444 9 999998
Q ss_pred cccccCCCCHHHHH
Q 010211 406 SGETAHGKFPLKAV 419 (515)
Q Consensus 406 s~ETa~G~yPveaV 419 (515)
..---.|+++++.+
T Consensus 223 gsal~~~~~~~~~~ 236 (241)
T 1qo2_A 223 GRAFLEGILTVEVM 236 (241)
T ss_dssp CHHHHTTSSCHHHH
T ss_pred eHHHHcCCCCHHHH
Confidence 65555677776543
No 225
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=53.44 E-value=59 Score=32.94 Aligned_cols=128 Identities=18% Similarity=0.191 Sum_probs=65.1
Q ss_pred CCCHhhHHHh--------hcchhcCCcEEEec---------ccCC----H------------HHHHHHHHHH-HhcCCCc
Q 010211 264 SITDKDWEDI--------KFGVDNQVDFYAVS---------FVKD----A------------KVVHELKDYL-KSCNADI 309 (515)
Q Consensus 264 ~ltekD~~dI--------~~al~~gvD~ValS---------fVrs----a------------~dv~~vr~~l-~~~~~~i 309 (515)
.||..|++.+ +.+.+.|+|+|=+- |... . .-+.++-+.+ +..+.+.
T Consensus 132 ~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~ 211 (343)
T 3kru_A 132 ELSVEEIKSIVKAFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENK 211 (343)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTS
T ss_pred hcCHHHHHHHHHHHHHHHhhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccC
Confidence 5788888776 23456799998775 3211 1 1112222223 3346677
Q ss_pred eEEEEecChh------hhhcHHHHHhh----cCeeEEcCCcccc-cCC-CCCHHHHHHHHHHHH-HhcCCcEEEEecccc
Q 010211 310 HVIVKIESAD------SIPNLHSIISA----SDGAMVARGDLGA-ELP-IEDVPLLQEDIIRRC-RSMQKPVIVATNMLE 376 (515)
Q Consensus 310 ~IIaKIEt~~------aveNldeIl~~----sDgImIgrgDLg~-elg-~e~v~~aqk~Ii~~c-~~aGKPvivATqmLe 376 (515)
.|..||---+ .+++.-++++. +|.|-+.-|...- .+. .+.. +-..++.. +..++||+....+
T Consensus 212 pv~vRls~~~~~~~g~~~~~~~~~a~~l~~~vd~i~vs~g~~~~~~~~~~~~~---~~~~~~~ir~~~~iPVi~~Ggi-- 286 (343)
T 3kru_A 212 PIFVRVSADDYMEGGINIDMMVEYINMIKDKVDLIDVSSGGLLNVDINLYPGY---QVKYAETIKKRCNIKTSAVGLI-- 286 (343)
T ss_dssp CEEEEEECCCSSTTSCCHHHHHHHHHHHTTTCSEEEEECCCSSCCCCCCCTTT---THHHHHHHHHHHTCEEEEESSC--
T ss_pred CeEEEeechhhhccCccHHHHHHHHHHhhccccEEeccCCceEeeeecccCce---eehHHHHHHHhcCcccceeeee--
Confidence 8888985321 13333334333 6877774333211 111 1111 11222222 2347898874311
Q ss_pred ccccCCCcChHHHhHHHHHHHhC-CcEEeec
Q 010211 377 SMIDHPTPTRAEVSDIAIAVREG-ADAVMLS 406 (515)
Q Consensus 377 SMi~~~~PtrAEv~DvanaV~~G-~D~vmLs 406 (515)
..|..|| .++..| +|.|++.
T Consensus 287 -----~t~e~Ae-----~~l~~G~aD~V~iG 307 (343)
T 3kru_A 287 -----TTQELAE-----EILSNERADLVALG 307 (343)
T ss_dssp -----CCHHHHH-----HHHHTTSCSEEEES
T ss_pred -----eHHHHHH-----HHHhchhhHHHHHH
Confidence 1233333 677888 9999985
No 226
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=53.36 E-value=56 Score=40.99 Aligned_cols=120 Identities=14% Similarity=0.079 Sum_probs=73.6
Q ss_pred HHHhhcchhcCCcE--EEecccCCHHHHHHHHHHHHhcCCCceEEEEecCh-hhhhcHHHHHhh-cCeeE---EcCCccc
Q 010211 270 WEDIKFGVDNQVDF--YAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESA-DSIPNLHSIISA-SDGAM---VARGDLG 342 (515)
Q Consensus 270 ~~dI~~al~~gvD~--ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~-~aveNldeIl~~-sDgIm---IgrgDLg 342 (515)
.+.++.+++.|++. |.+++-. + ...++.+++++. .+.++..+-+. +|.+....+.+. +|+|+ +--+|=|
T Consensus 656 ~~~~~~~~~~gv~i~gv~~~~G~-p-~~e~~~~~l~~~--gi~~i~~v~~~~~a~~~v~~l~~aG~D~iV~~q~~G~eaG 731 (2060)
T 2uva_G 656 IPLLGRLRADGVPIEGLTIGAGV-P-SIEVANEYIQTL--GIRHISFKPGSVDAIQQVINIAKANPTFPIILQWTGGRGG 731 (2060)
T ss_dssp HHHHHHHHTTTCCEEEEEEESSC-C-CHHHHHHHHHHS--CCSEEEECCCSHHHHHHHHHHHHHCTTSCEEEEECCTTSS
T ss_pred HHHHHHHHHcCCCcceEeecCCC-C-CHHHHHHHHHHc--CCeEEEecCCHHHHHHHHHHHHHcCCCEEEEeeeEcccCC
Confidence 35667778889998 7776643 1 122356677765 45566655443 344443445555 89998 6555666
Q ss_pred ccCCCCCHHHHHHHHHHHHHh-cCCcEEEEeccccccccCCCcChHHHhHHHHHH-----------HhCCcEEee
Q 010211 343 AELPIEDVPLLQEDIIRRCRS-MQKPVIVATNMLESMIDHPTPTRAEVSDIAIAV-----------REGADAVML 405 (515)
Q Consensus 343 ~elg~e~v~~aqk~Ii~~c~~-aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV-----------~~G~D~vmL 405 (515)
-..|.+++....-.++...++ .+.|+|.|. +.-+ -.|++.++ ..|+|+|++
T Consensus 732 GH~g~~d~~~~~l~lv~~i~~~~~ipviaaG---------GI~~---g~~i~aaltg~ws~~~g~palGAdgV~~ 794 (2060)
T 2uva_G 732 GHHSFEDFHQPILLMYSRIRKCSNIVLVAGS---------GFGG---SEDTYPYLTGSWSTKFGYPPMPFDGCMF 794 (2060)
T ss_dssp SSCCSCCSHHHHHHHHHHHHTSTTEEEEEES---------SCCS---HHHHHHHHHTCGGGTTTSCCCCCSCEEE
T ss_pred CCCCcccccchHHHHHHHHHHHcCCCEEEeC---------CCCC---HHHHHHHhcCcchhhcCCCCCCCCEEEE
Confidence 666654433333344444444 478888864 4444 34678888 899999986
No 227
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=53.34 E-value=84 Score=30.92 Aligned_cols=96 Identities=20% Similarity=0.203 Sum_probs=55.9
Q ss_pred HHHHhh-cCeeEEc-CCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHH-HhHHHHHHHhCCc
Q 010211 325 HSIISA-SDGAMVA-RGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGAD 401 (515)
Q Consensus 325 deIl~~-sDgImIg-rgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAE-v~DvanaV~~G~D 401 (515)
+-.++. +||+++. ---=+..+..++-..+.+..++.++. ..||+..+ +..+-.| +...-.+-..|+|
T Consensus 35 ~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g-rvpviaGv---------g~~~t~~ai~la~~a~~~Gad 104 (297)
T 3flu_A 35 DWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAK-RVPVIAGT---------GANNTVEAIALSQAAEKAGAD 104 (297)
T ss_dssp HHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-SSCEEEEC---------CCSSHHHHHHHHHHHHHTTCS
T ss_pred HHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCC-CCcEEEeC---------CCcCHHHHHHHHHHHHHcCCC
Confidence 333444 8999984 11111222334444455555555532 47888743 4444455 5556677778999
Q ss_pred EEeecccccCCCCHHHHHHHHHHHHHHHh
Q 010211 402 AVMLSGETAHGKFPLKAVKVMHTVALRTE 430 (515)
Q Consensus 402 ~vmLs~ETa~G~yPveaV~~m~~I~~~aE 430 (515)
++|+..=--...-.-+.++....|+..+.
T Consensus 105 avlv~~P~y~~~~~~~l~~~f~~va~a~~ 133 (297)
T 3flu_A 105 YTLSVVPYYNKPSQEGIYQHFKTIAEATS 133 (297)
T ss_dssp EEEEECCCSSCCCHHHHHHHHHHHHHHCC
T ss_pred EEEECCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 99986322222335677888888888774
No 228
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=53.26 E-value=74 Score=34.06 Aligned_cols=96 Identities=16% Similarity=0.176 Sum_probs=55.2
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEE-ecChhhhhcHHHHHhh-cCeeEEc-CCcccccCCCCCHHHHHHHHHHHHHh----
Q 010211 291 DAKVVHELKDYLKSCNADIHVIVK-IESADSIPNLHSIISA-SDGAMVA-RGDLGAELPIEDVPLLQEDIIRRCRS---- 363 (515)
Q Consensus 291 sa~dv~~vr~~l~~~~~~i~IIaK-IEt~~aveNldeIl~~-sDgImIg-rgDLg~elg~e~v~~aqk~Ii~~c~~---- 363 (515)
+.+++..+++.. +++|++| +-+ .+......+. +|+|.|+ .|--..+.+.+ -..+..++.+++.+
T Consensus 331 ~~~~i~~lr~~~-----~~PvivKgv~~---~e~A~~a~~aGad~I~vs~hgG~~~d~~~~-~~~~l~~v~~~v~~~~~~ 401 (511)
T 1kbi_A 331 TWKDIEELKKKT-----KLPIVIKGVQR---TEDVIKAAEIGVSGVVLSNHGGRQLDFSRA-PIEVLAETMPILEQRNLK 401 (511)
T ss_dssp CHHHHHHHHHHC-----SSCEEEEEECS---HHHHHHHHHTTCSEEEECCTTTTSSTTCCC-HHHHHHHHHHHHHTTTCB
T ss_pred HHHHHHHHHHHh-----CCcEEEEeCCC---HHHHHHHHHcCCCEEEEcCCCCccCCCCCc-hHHHHHHHHHHHHhhccC
Confidence 345565565543 5778888 332 2333333333 8999994 11111122222 23455666666653
Q ss_pred cCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecc
Q 010211 364 MQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 407 (515)
Q Consensus 364 aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ 407 (515)
...|||.. .+.-+ -.|+..++..|+|+||+..
T Consensus 402 ~~ipVia~---------GGI~~---g~Dv~kaLalGAdaV~iGr 433 (511)
T 1kbi_A 402 DKLEVFVD---------GGVRR---GTDVLKALCLGAKGVGLGR 433 (511)
T ss_dssp TTBEEEEE---------SSCCS---HHHHHHHHHHTCSEEEECH
T ss_pred CCcEEEEE---------CCCCC---HHHHHHHHHcCCCEEEECH
Confidence 35788874 23333 3488899999999999853
No 229
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=53.06 E-value=1.2e+02 Score=27.70 Aligned_cols=127 Identities=16% Similarity=0.119 Sum_probs=66.5
Q ss_pred HHhhcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecChhh----hhcHHHHHhh-----cCeeEEcCCcc
Q 010211 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADS----IPNLHSIISA-----SDGAMVARGDL 341 (515)
Q Consensus 271 ~dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~a----veNldeIl~~-----sDgImIgrgDL 341 (515)
..++...+.|+|+|.+...-..+- ++... +.+ .+.+.+..-+... .+.++.++.. .||+-+.+.
T Consensus 69 ~~v~~~~~~Gad~vtvh~~~g~~~---i~~~~-~~~-gv~vl~~t~~~~~~~~~~~~v~~~~~~a~~~G~~G~~~~~~-- 141 (208)
T 2czd_A 69 LIARKVFGAGADYVIVHTFVGRDS---VMAVK-ELG-EIIMVVEMSHPGALEFINPLTDRFIEVANEIEPFGVIAPGT-- 141 (208)
T ss_dssp HHHHHHHHTTCSEEEEESTTCHHH---HHHHH-TTS-EEEEECCCCSGGGGTTTGGGHHHHHHHHHHHCCSEEECCCS--
T ss_pred HHHHHHHhcCCCEEEEeccCCHHH---HHHHH-HhC-CcEEEEecCCcchhhHHHHHHHHHHHHHHHhCCcEEEECCC--
Confidence 345555688999998875444333 33332 333 4444444322211 3445555443 566655422
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcC-CcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecccccCCCCHHHHHH
Q 010211 342 GAELPIEDVPLLQEDIIRRCRSMQ-KPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVK 420 (515)
Q Consensus 342 g~elg~e~v~~aqk~Ii~~c~~aG-KPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ETa~G~yPveaV~ 420 (515)
..+++ +++-+.+ + .++++. -...+. -.++..++..|+|.+....--...+-|.++++
T Consensus 142 ----~~~~i----~~lr~~~---~~~~~iv~--------gGI~~~---g~~~~~~~~aGad~vvvGr~I~~a~dp~~~~~ 199 (208)
T 2czd_A 142 ----RPERI----GYIRDRL---KEGIKILA--------PGIGAQ---GGKAKDAVKAGADYIIVGRAIYNAPNPREAAK 199 (208)
T ss_dssp ----STHHH----HHHHHHS---CTTCEEEE--------CCCCSS---TTHHHHHHHHTCSEEEECHHHHTSSSHHHHHH
T ss_pred ----ChHHH----HHHHHhC---CCCeEEEE--------CCCCCC---CCCHHHHHHcCCCEEEEChHHhcCCCHHHHHH
Confidence 11233 3333333 4 355542 222332 12355777889999997654444556999988
Q ss_pred HHHHHH
Q 010211 421 VMHTVA 426 (515)
Q Consensus 421 ~m~~I~ 426 (515)
.+.+..
T Consensus 200 ~l~~~i 205 (208)
T 2czd_A 200 AIYDEI 205 (208)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887643
No 230
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3
Probab=52.60 E-value=18 Score=34.71 Aligned_cols=53 Identities=11% Similarity=0.144 Sum_probs=35.8
Q ss_pred CCHHHHHHHH-HhCCcEEEEecCCC-------ChHHHHHHHHHHHHHHhhcCCceEEEEEecCC
Q 010211 112 SSREMIWKLA-EEGMNVARLNMSHG-------DHASHQKTIDLVKEYNSQFEDKAVAIMLDTKG 167 (515)
Q Consensus 112 ~~~e~i~~li-~aGm~v~RiN~SHg-------~~e~~~~~i~~ir~~~~~~~~~~i~I~lDL~G 167 (515)
-+.+.++.|. +.|+|++|+-+... +++...+.++.+=+...+.| +.+++|+-+
T Consensus 39 ~~~~d~~~l~~~~G~N~vR~~~~~~~~~~~~~~~~~~~~~ld~~v~~a~~~G---i~vild~h~ 99 (291)
T 1egz_A 39 YTADTVASLKKDWKSSIVRAAMGVQESGGYLQDPAGNKAKVERVVDAAIAND---MYAIIGWHS 99 (291)
T ss_dssp CSHHHHHHHHHTTCCCEEEEEEECSSTTSTTTCHHHHHHHHHHHHHHHHHTT---CEEEEEEEC
T ss_pred CCHHHHHHHHHHcCCCEEEEeccccccCCCcCCHHHHHHHHHHHHHHHHHCC---CEEEEEcCC
Confidence 3678999998 79999999987643 23334445555545555666 677888743
No 231
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}
Probab=52.45 E-value=41 Score=32.03 Aligned_cols=58 Identities=9% Similarity=0.098 Sum_probs=39.8
Q ss_pred HHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecccccCCCCHHHHHHHHHHHHH
Q 010211 354 QEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVAL 427 (515)
Q Consensus 354 qk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~ 427 (515)
-...++.++++|++|.+-| ..+.+. +..+...++..|+|+++- +||..+.+.+.++|+
T Consensus 201 ~~~~v~~~~~~G~~v~~wT-------v~~~~n--~~~~~~~l~~~GvdgI~T-------D~p~~~~~~l~~~~~ 258 (258)
T 2o55_A 201 TKEQVCTAHEKGLSVTVWM-------PWIFDD--SEEDWKKCLELQVDLICS-------NYPFGLMNFLSNISE 258 (258)
T ss_dssp CHHHHHHHHHTTCEEEEEC-------CTTCCC--CHHHHHHHHHHTCSEEEE-------SCHHHHHHHHTC---
T ss_pred CHHHHHHHHHCCCEEEEee-------CCCCCC--CHHHHHHHHHcCCCEEEe-------CCHHHHHHHHHHhcC
Confidence 3678999999999999977 100111 122344677889999885 799999998887764
No 232
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=52.04 E-value=79 Score=31.50 Aligned_cols=96 Identities=17% Similarity=0.172 Sum_probs=56.4
Q ss_pred HHHHhh-cCeeEEc-CCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHH-HhHHHHHHHhCCc
Q 010211 325 HSIISA-SDGAMVA-RGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGAD 401 (515)
Q Consensus 325 deIl~~-sDgImIg-rgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAE-v~DvanaV~~G~D 401 (515)
+..++. +||+++. ---=+..+..++-..+.+.+++.++. ..||+..| +..+-.| +...-.+-..|+|
T Consensus 51 ~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~g-rvpViaGv---------g~~st~eai~la~~A~~~Gad 120 (314)
T 3qze_A 51 DFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKG-RIPVIAGT---------GANSTREAVALTEAAKSGGAD 120 (314)
T ss_dssp HHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTT-SSCEEEEC---------CCSSHHHHHHHHHHHHHTTCS
T ss_pred HHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEeC---------CCcCHHHHHHHHHHHHHcCCC
Confidence 333444 8999984 11111222334444555555555532 36888743 4444455 5556667778999
Q ss_pred EEeecccccCCCCHHHHHHHHHHHHHHHh
Q 010211 402 AVMLSGETAHGKFPLKAVKVMHTVALRTE 430 (515)
Q Consensus 402 ~vmLs~ETa~G~yPveaV~~m~~I~~~aE 430 (515)
++|+..=--...-+-+.++....|+..+.
T Consensus 121 avlv~~P~y~~~s~~~l~~~f~~va~a~~ 149 (314)
T 3qze_A 121 ACLLVTPYYNKPTQEGMYQHFRHIAEAVA 149 (314)
T ss_dssp EEEEECCCSSCCCHHHHHHHHHHHHHHSC
T ss_pred EEEEcCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 99986322222335678888999988774
No 233
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=51.65 E-value=18 Score=34.08 Aligned_cols=127 Identities=17% Similarity=0.285 Sum_probs=77.4
Q ss_pred hhHHHhhcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh------cCeeEEcCCcc
Q 010211 268 KDWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA------SDGAMVARGDL 341 (515)
Q Consensus 268 kD~~dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~------sDgImIgrgDL 341 (515)
+|.++++.+++..++++++.+. +-..+.++.+.++++++ .++..++..+|+.+=+.=+.. .|||+=.+.-+
T Consensus 17 r~~~~l~~al~s~~~~ifll~g-~i~~l~~~v~~lk~~~K--~v~Vh~Dli~Gls~d~~ai~fL~~~~~pdGIIsTk~~~ 93 (192)
T 3kts_A 17 HNQKDMEKILELDLTYMVMLET-HVAQLKALVKYAQAGGK--KVLLHADLVNGLKNDDYAIDFLCTEICPDGIISTRGNA 93 (192)
T ss_dssp SSSHHHHHHTTSSCCEEEECSE-ETTTHHHHHHHHHHTTC--EEEEEGGGEETCCCSHHHHHHHHHTTCCSEEEESCHHH
T ss_pred cCHHHHHHHHcCCCCEEEEecC-cHHHHHHHHHHHHHcCC--eEEEecCchhccCCcHHHHHHHHhCCCCCEEEeCcHHH
Confidence 5778888888888999988875 44556666667777775 455588888888653222221 67777554321
Q ss_pred ---cccCCC-------------------------CC----HHHHH-HHHHHHHHhcCCcEEEEeccccccccCCCcChHH
Q 010211 342 ---GAELPI-------------------------ED----VPLLQ-EDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE 388 (515)
Q Consensus 342 ---g~elg~-------------------------e~----v~~aq-k~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAE 388 (515)
+-++|+ |+ +|... +-|-+.++..+.|+|.. ...-+
T Consensus 94 i~~Ak~~gL~tIqR~FliDS~al~~~~~~i~~~~PD~iEiLPGi~p~iI~~i~~~~~~PiIaG---------GlI~~--- 161 (192)
T 3kts_A 94 IMKAKQHKMLAIQRLFMIDSSAYNKGVALIQKVQPDCIELLPGIIPEQVQKMTQKLHIPVIAG---------GLIET--- 161 (192)
T ss_dssp HHHHHHTTCEEEEEEECCSHHHHHHHHHHHHHHCCSEEEEECTTCHHHHHHHHHHHCCCEEEE---------SSCCS---
T ss_pred HHHHHHCCCeEEEEEEEEEcchHHHHHHHHhhcCCCEEEECCchhHHHHHHHHHhcCCCEEEE---------CCcCC---
Confidence 111122 00 11111 22333366778998874 23333
Q ss_pred HhHHHHHHHhCCcEEeecccc
Q 010211 389 VSDIAIAVREGADAVMLSGET 409 (515)
Q Consensus 389 v~DvanaV~~G~D~vmLs~ET 409 (515)
..|+.+++..|+|+|.-|...
T Consensus 162 ~edv~~al~aGA~aVsTs~~~ 182 (192)
T 3kts_A 162 SEQVNQVIASGAIAVTTSNKH 182 (192)
T ss_dssp HHHHHHHHTTTEEEEEECCGG
T ss_pred HHHHHHHHHcCCeEEEeCCHH
Confidence 346779999999999987553
No 234
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=51.55 E-value=93 Score=29.23 Aligned_cols=99 Identities=10% Similarity=0.135 Sum_probs=61.6
Q ss_pred HhhcchhcCCcEEEecccC----CHHHHHHHHHHHHhcCCCceEEEE------ec----------------ChhhhhcHH
Q 010211 272 DIKFGVDNQVDFYAVSFVK----DAKVVHELKDYLKSCNADIHVIVK------IE----------------SADSIPNLH 325 (515)
Q Consensus 272 dI~~al~~gvD~ValSfVr----sa~dv~~vr~~l~~~~~~i~IIaK------IE----------------t~~aveNld 325 (515)
.++.+.+.|+|+|-+.+-. +.+++.++++.+++.|-.+..+.- .- ..++++.+.
T Consensus 26 ~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 105 (290)
T 3tva_A 26 HLEVAQDLKVPTVQVHAPHPHTRTREHAQAFRAKCDAAGIQVTVIFGGFDGESYADIPTTARTVGLVPLETRASRVAEMK 105 (290)
T ss_dssp CHHHHHHTTCSEEEEECCCGGGCSHHHHHHHHHHHHHTTCEEEEEECCCTTCCCSSHHHHHHHSSSCSTTTHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEecCCCCCcCCHHHHHHHHHHHHHcCCEEEEEeeccCCcccccccccccccCCCCHHHHHHHHHHHH
Confidence 4566678899998877532 366788899999887765544421 00 023455555
Q ss_pred HHHhh-----cCeeEEcCCccccc--CCCCCHHHHHHHHHHHHHhcCCcEEE
Q 010211 326 SIISA-----SDGAMVARGDLGAE--LPIEDVPLLQEDIIRRCRSMQKPVIV 370 (515)
Q Consensus 326 eIl~~-----sDgImIgrgDLg~e--lg~e~v~~aqk~Ii~~c~~aGKPviv 370 (515)
..++. ++.|.+..|...-. -.++.+....+++.+.|.++|..+.+
T Consensus 106 ~~i~~a~~lG~~~v~~~~G~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~l 157 (290)
T 3tva_A 106 EISDFASWVGCPAIGLHIGFVPESSSPDYSELVRVTQDLLTHAANHGQAVHL 157 (290)
T ss_dssp HHHHHHHHHTCSEEEECCCCCCCTTSHHHHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHcCCCEEEEcCCCCcccchHHHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 55554 57777755533211 11234566678888888888887766
No 235
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=51.40 E-value=34 Score=34.79 Aligned_cols=150 Identities=16% Similarity=0.149 Sum_probs=85.9
Q ss_pred HhhHHHhhcchhcCCcE--EEecccCCHHHHHHHHHHHHhcCCCceEEEE-ecChhhhhcHHHHHhh--c--CeeEEcCC
Q 010211 267 DKDWEDIKFGVDNQVDF--YAVSFVKDAKVVHELKDYLKSCNADIHVIVK-IESADSIPNLHSIISA--S--DGAMVARG 339 (515)
Q Consensus 267 ekD~~dI~~al~~gvD~--ValSfVrsa~dv~~vr~~l~~~~~~i~IIaK-IEt~~aveNldeIl~~--s--DgImIgrg 339 (515)
+.+.+-++.|++.|.+. +.-|. .- +....+-....+.+ ..++++ ....+-++.+-+.+.. . +-|++.||
T Consensus 141 T~~~eV~eaAleagag~~~lINsv-~~-~~~~~m~~laa~~g--~~vVlmh~~d~~~~~~l~~~a~~~GI~~e~IIlDPg 216 (323)
T 4djd_D 141 EKDHEVLEAVAEAAAGENLLLGNA-EQ-ENYKSLTAACMVHK--HNIIARSPLDINICKQLNILINEMNLPLDHIVIDPS 216 (323)
T ss_dssp HHHHHHHHHHHHHTTTSCCEEEEE-BT-TBCHHHHHHHHHHT--CEEEEECSSCHHHHHHHHHHHHTTTCCGGGEEEECC
T ss_pred CCCHHHHHHHHHhcCCCCCeEEEC-Cc-ccHHHHHHHHHHhC--CeEEEEccchHHHHHHHHHHHHHcCCCHHHEEEeCC
Confidence 56778888888888651 22232 11 22233444444433 344444 2222233333333333 3 56888888
Q ss_pred cccccCCCCCHHHHHHHHHHHH----HhcCCcEEEEeccccccccC-------------CCcChH---HHhHHHHHHHhC
Q 010211 340 DLGAELPIEDVPLLQEDIIRRC----RSMQKPVIVATNMLESMIDH-------------PTPTRA---EVSDIAIAVREG 399 (515)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c----~~aGKPvivATqmLeSMi~~-------------~~PtrA---Ev~DvanaV~~G 399 (515)
=....-+.+.-...++++=+.+ +..|-|+++..- =+||+.. +...|. |+.-.+.++..|
T Consensus 217 ~g~fgk~~e~~l~~l~~ir~~al~~~~~lg~PvL~GvS-rksf~~ke~~~~~~~~~~~g~~~~~~~~~E~~~a~~~~~~~ 295 (323)
T 4djd_D 217 IGGLGYGIEYSFSIMERIRLGALQGDKMLSMPVICTVG-YEAWRAKEASAPVSEYPGWGKETERGILWEAVTATALLQAG 295 (323)
T ss_dssp CCCTTTTHHHHHHHHHHHHHHHHHTCGGGCSCBEEEHH-HHHHTSHHHHCCTTTCGGGCCHHHHHHHHHHHHHHHHHTTT
T ss_pred CccccCCHHHHHHHHHHHHHHhhcccccCCCCEEEecc-hhhhhhccccccccccccccccchhhHHHHHHHHHHHHHhc
Confidence 7655555666666666665543 468999998530 1233322 111122 455567888899
Q ss_pred CcEEeecccccCCCCHHHHHHHHHHHHHHH
Q 010211 400 ADAVMLSGETAHGKFPLKAVKVMHTVALRT 429 (515)
Q Consensus 400 ~D~vmLs~ETa~G~yPveaV~~m~~I~~~a 429 (515)
+|.++|. +| ++|++++++....
T Consensus 296 ~~i~v~~-------~p-~~~~~~~~~~~~l 317 (323)
T 4djd_D 296 AHILLMR-------HP-EAVARVKENIDQL 317 (323)
T ss_dssp CSEEEEC-------CH-HHHHHHHHHHHHH
T ss_pred CCEEEEc-------CH-HHHHHHHHHHHHH
Confidence 9999995 67 8999999887654
No 236
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=51.39 E-value=64 Score=32.00 Aligned_cols=81 Identities=20% Similarity=0.226 Sum_probs=54.0
Q ss_pred cCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcC-CcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecccc
Q 010211 331 SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQ-KPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGET 409 (515)
Q Consensus 331 sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aG-KPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ET 409 (515)
.|+||--....|...|+.. +...+.+++. ... .|||++. +.-|. +|++.++..|+|+|++.+--
T Consensus 146 ~~aVmPlg~pIGsG~Gi~~-~~~L~~i~~~--~~~~vPVI~~G---------GI~tp---sDAa~AmeLGAdgVlVgSAI 210 (268)
T 2htm_A 146 TATVMPLAAPIGSGWGVRT-RALLELFARE--KASLPPVVVDA---------GLGLP---SHAAEVMELGLDAVLVNTAI 210 (268)
T ss_dssp CSCBEEBSSSTTTCCCSTT-HHHHHHHHHT--TTTSSCBEEES---------CCCSH---HHHHHHHHTTCCEEEESHHH
T ss_pred CCEEEecCccCcCCcccCC-HHHHHHHHHh--cCCCCeEEEeC---------CCCCH---HHHHHHHHcCCCEEEEChHH
Confidence 6788764455555556554 4444444321 234 8999854 44443 36779999999999998777
Q ss_pred cCCCCHHHHHHHHHHHH
Q 010211 410 AHGKFPLKAVKVMHTVA 426 (515)
Q Consensus 410 a~G~yPveaV~~m~~I~ 426 (515)
+.++.|.+-.+.|..-+
T Consensus 211 ~~a~dP~~ma~af~~Av 227 (268)
T 2htm_A 211 AEAQDPPAMAEAFRLAV 227 (268)
T ss_dssp HTSSSHHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHH
Confidence 88889987776666543
No 237
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=51.37 E-value=54 Score=33.27 Aligned_cols=96 Identities=15% Similarity=0.028 Sum_probs=58.4
Q ss_pred HHhhcchhcCCcEEEe------cccCCHHHHHHHHHHHHhcCCCceEEEEec---ChhhhhcHHHHHhh-cCeeEEcCCc
Q 010211 271 EDIKFGVDNQVDFYAV------SFVKDAKVVHELKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARGD 340 (515)
Q Consensus 271 ~dI~~al~~gvD~Val------SfVrsa~dv~~vr~~l~~~~~~i~IIaKIE---t~~aveNldeIl~~-sDgImIgrgD 340 (515)
+.++|-++.|+|+|.+ ++.-+.++-.++-+. ..+.++.||+-+= |.++++......+. +|++|+-+-.
T Consensus 51 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~--~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~ 128 (344)
T 2hmc_A 51 RKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVER--LVKAGIPVIVGTGAVNTASAVAHAVHAQKVGAKGLMVIPRV 128 (344)
T ss_dssp HHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHH--HHHTTCCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCC
T ss_pred HHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHH--HhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCc
Confidence 4456778899999876 233444444444444 3455789999884 46677766666555 8999997554
Q ss_pred ccccCCCCCHHHHHHHHHHHHH-hcCCcEEEE
Q 010211 341 LGAELPIEDVPLLQEDIIRRCR-SMQKPVIVA 371 (515)
Q Consensus 341 Lg~elg~e~v~~aqk~Ii~~c~-~aGKPvivA 371 (515)
..-...-+.+....+ +.|. +.+.|+++.
T Consensus 129 y~~~~s~~~l~~~f~---~IA~aa~~lPiilY 157 (344)
T 2hmc_A 129 LSRGSVIAAQKAHFK---AILSAAPEIPAVIY 157 (344)
T ss_dssp SSSTTCHHHHHHHHH---HHHHHSTTSCEEEE
T ss_pred cCCCCCHHHHHHHHH---HHHhhCCCCcEEEE
Confidence 322011123333333 4455 568999885
No 238
>2kct_A Cytochrome C-type biogenesis protein CCME; solution structure, heme chaperone, cytochrome C biogenesis, OB-fold domain, NESG, PSI-2; NMR {Desulfovibrio vulgaris str}
Probab=51.23 E-value=61 Score=27.16 Aligned_cols=55 Identities=20% Similarity=0.205 Sum_probs=39.5
Q ss_pred CCCeeeeecc--CCcEEEe-cCCEEEEEeecCCCCcceEEecccccc-cccCcCCEEEE
Q 010211 166 KGPEVRSGDV--PQPIILK-EGQEFNFTIKRGVSTEDTVSVNYDDFV-NDVEVGDILLV 220 (515)
Q Consensus 166 ~GPkIRtG~l--~~~i~L~-~G~~v~lt~~~~~~~~~~i~v~~~~l~-~~v~~Gd~Ili 220 (515)
.|..||+|.+ ++.+.-. .|..++|...+.......++|.|..++ +..+.|.-|..
T Consensus 7 ~~~~iRvgG~V~~GSv~r~~~~~~v~F~vtD~~~~~~~v~V~Y~GilPDlFrEGqgVV~ 65 (94)
T 2kct_A 7 KLHTVRLFGTVAADGLTMLDGAPGVRFRLEDKDNTSKTVWVLYKGAVPDTFKPGVEVII 65 (94)
T ss_dssp TTCCEEEEEEECSTTCEECTTSSEEEEEEECSSCTTCEEEEEEESCCCTTCCTTCEEEE
T ss_pred CCCeEEEeeEEeCCeEEecCCCCEEEEEEEcCCCCCcEEEEEECCCCCccccCCCeEEE
Confidence 6789999876 3455544 478899988764444678999998654 56688888876
No 239
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=51.23 E-value=11 Score=32.08 Aligned_cols=62 Identities=6% Similarity=0.074 Sum_probs=47.5
Q ss_pred HHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhhcCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEE
Q 010211 294 VVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIV 370 (515)
Q Consensus 294 dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPviv 370 (515)
-+..++++.++.|-++.+.+ .+...+++.+.-.|.|++| |.+....+++-+.|...|+||.+
T Consensus 22 lv~km~~~a~~~gi~v~i~a-----~~~~~~~~~~~~~DvvLLg----------PQV~y~~~~ik~~~~~~~ipV~v 83 (108)
T 3nbm_A 22 LANAINEGANLTEVRVIANS-----GAYGAHYDIMGVYDLIILA----------PQVRSYYREMKVDAERLGIQIVA 83 (108)
T ss_dssp HHHHHHHHHHHHTCSEEEEE-----EETTSCTTTGGGCSEEEEC----------GGGGGGHHHHHHHHTTTTCEEEE
T ss_pred HHHHHHHHHHHCCCceEEEE-----cchHHHHhhccCCCEEEEC----------hHHHHHHHHHHHHhhhcCCcEEE
Confidence 45667888887777766666 2333466667779999998 67777888888889999999987
No 240
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=50.92 E-value=75 Score=30.43 Aligned_cols=101 Identities=15% Similarity=0.220 Sum_probs=58.7
Q ss_pred hcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh-cCeeEEcCCcccccCCCCCHHH
Q 010211 274 KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIEDVPL 352 (515)
Q Consensus 274 ~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDgImIgrgDLg~elg~e~v~~ 352 (515)
+..++.|++.+=+.| +++.-...++.+-++. .+..|-+ -|.--.+..+..++. +|-|+ .|+
T Consensus 32 ~al~~gGi~~iEvt~-~t~~a~~~I~~l~~~~-p~~~IGA--GTVlt~~~a~~ai~AGA~fiv-sP~------------- 93 (217)
T 3lab_A 32 KALVAGGVHLLEVTL-RTEAGLAAISAIKKAV-PEAIVGA--GTVCTADDFQKAIDAGAQFIV-SPG------------- 93 (217)
T ss_dssp HHHHHTTCCEEEEET-TSTTHHHHHHHHHHHC-TTSEEEE--ECCCSHHHHHHHHHHTCSEEE-ESS-------------
T ss_pred HHHHHcCCCEEEEeC-CCccHHHHHHHHHHHC-CCCeEee--ccccCHHHHHHHHHcCCCEEE-eCC-------------
Confidence 344566777777765 4555444454433332 2333333 354445555555555 55443 333
Q ss_pred HHHHHHHHHHhcCC------cEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeec
Q 010211 353 LQEDIIRRCRSMQK------PVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (515)
Q Consensus 353 aqk~Ii~~c~~aGK------PvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs 406 (515)
.-.++++.|+++|. |++=- ..+|+ ++..+...|+|.+=+-
T Consensus 94 ~~~evi~~~~~~~v~~~~~~~~~PG---------~~Tpt-----E~~~A~~~Gad~vK~F 139 (217)
T 3lab_A 94 LTPELIEKAKQVKLDGQWQGVFLPG---------VATAS-----EVMIAAQAGITQLKCF 139 (217)
T ss_dssp CCHHHHHHHHHHHHHCSCCCEEEEE---------ECSHH-----HHHHHHHTTCCEEEET
T ss_pred CcHHHHHHHHHcCCCccCCCeEeCC---------CCCHH-----HHHHHHHcCCCEEEEC
Confidence 23578899999999 87531 12233 4568899999999774
No 241
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=50.48 E-value=1.4e+02 Score=27.12 Aligned_cols=87 Identities=9% Similarity=0.192 Sum_probs=51.4
Q ss_pred HHhhcchhcCCcEEEe-----cccCC----HHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh-cCeeEEcCCc
Q 010211 271 EDIKFGVDNQVDFYAV-----SFVKD----AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGD 340 (515)
Q Consensus 271 ~dI~~al~~gvD~Val-----SfVrs----a~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDgImIgrgD 340 (515)
+.++.+.+.|+|++.+ +|++. .+.++++++. .+..+.+-.++.+++- .++..++. +|++.+.-+.
T Consensus 20 ~~~~~~~~~G~~~i~~~~~dg~~~~~~~~g~~~i~~i~~~---~~~~~~v~l~v~d~~~--~i~~~~~~gad~v~vh~~~ 94 (220)
T 2fli_A 20 SELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKH---SKLVFDCHLMVVDPER--YVEAFAQAGADIMTIHTES 94 (220)
T ss_dssp HHHHHHHHTTCCEEEEEEEBSSSSSCBCBCHHHHHHHHTT---CCSEEEEEEESSSGGG--GHHHHHHHTCSEEEEEGGG
T ss_pred HHHHHHHHcCCCEEEEEeecCCCCCccccCHHHHHHHHHh---CCCCEEEEEeecCHHH--HHHHHHHcCCCEEEEccCc
Confidence 5666777788987433 44555 4444444432 2334566678877642 35555555 8999885221
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcCCcEEEEe
Q 010211 341 LGAELPIEDVPLLQEDIIRRCRSMQKPVIVAT 372 (515)
Q Consensus 341 Lg~elg~e~v~~aqk~Ii~~c~~aGKPvivAT 372 (515)
+ +.. ...++.+++.|+.++++.
T Consensus 95 -----~-~~~----~~~~~~~~~~g~~i~~~~ 116 (220)
T 2fli_A 95 -----T-RHI----HGALQKIKAAGMKAGVVI 116 (220)
T ss_dssp -----C-SCH----HHHHHHHHHTTSEEEEEE
T ss_pred -----c-ccH----HHHHHHHHHcCCcEEEEE
Confidence 1 232 345566677898888863
No 242
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=50.35 E-value=1.9e+02 Score=28.32 Aligned_cols=113 Identities=15% Similarity=0.029 Sum_probs=60.6
Q ss_pred hHHHhhcchhcCC-cEEEecccCCHHHHHHHHHHHHhc-CCC--ceEEEEe--cChhhhhcHHHHHhh-cCeeEEcCCcc
Q 010211 269 DWEDIKFGVDNQV-DFYAVSFVKDAKVVHELKDYLKSC-NAD--IHVIVKI--ESADSIPNLHSIISA-SDGAMVARGDL 341 (515)
Q Consensus 269 D~~dI~~al~~gv-D~ValSfVrsa~dv~~vr~~l~~~-~~~--i~IIaKI--Et~~aveNldeIl~~-sDgImIgrgDL 341 (515)
+.+....+.+.|. .++......+++++.+.-+.+++. +.. +.++..- ..+.--+.++.+++. +|+|.++-|+
T Consensus 28 ~~~la~av~~aGglG~i~~~~~~s~~~l~~~i~~i~~~~~~p~~v~l~v~~~~~~~~~~~~~~~~~~~g~d~V~~~~g~- 106 (328)
T 2gjl_A 28 RAEMAAAVANAGGLATLSALTQPSPEALAAEIARCRELTDRPFGVNLTLLPTQKPVPYAEYRAAIIEAGIRVVETAGND- 106 (328)
T ss_dssp SHHHHHHHHHTTSBCEEETTTSSSHHHHHHHHHHHHHHCSSCCEEEEEECCCSSCCCHHHHHHHHHHTTCCEEEEEESC-
T ss_pred cHHHHHHHHHCCCeEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEeccccccCccHHHHHHHHHhcCCCEEEEcCCC-
Confidence 3444555555564 444444445577765433333322 222 2333320 023323445555555 8999887332
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeeccc
Q 010211 342 GAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGE 408 (515)
Q Consensus 342 g~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~E 408 (515)
+ .++++.++++|+|++... .+.. +...+...|+|++.+.+=
T Consensus 107 ------p------~~~~~~l~~~gi~vi~~v-----------~t~~---~a~~~~~~GaD~i~v~g~ 147 (328)
T 2gjl_A 107 ------P------GEHIAEFRRHGVKVIHKC-----------TAVR---HALKAERLGVDAVSIDGF 147 (328)
T ss_dssp ------C------HHHHHHHHHTTCEEEEEE-----------SSHH---HHHHHHHTTCSEEEEECT
T ss_pred ------c------HHHHHHHHHcCCCEEeeC-----------CCHH---HHHHHHHcCCCEEEEECC
Confidence 2 356777888899998521 1222 334678899999999653
No 243
>1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3
Probab=50.34 E-value=29 Score=34.93 Aligned_cols=57 Identities=19% Similarity=0.320 Sum_probs=37.0
Q ss_pred CCCCCHHHHHHHHHhCCcEEEEecCCCCh---------HHHHHHHHHHHHHHhhcCCceEEEEEecCCC
Q 010211 109 PSTSSREMIWKLAEEGMNVARLNMSHGDH---------ASHQKTIDLVKEYNSQFEDKAVAIMLDTKGP 168 (515)
Q Consensus 109 Pss~~~e~i~~li~aGm~v~RiN~SHg~~---------e~~~~~i~~ir~~~~~~~~~~i~I~lDL~GP 168 (515)
+.....+.++.|-+.|+|++||-++.... +.+.+.++.+=+...+.| +.+++|+-..
T Consensus 59 ~~~~~~~di~~i~~~G~n~vRipv~w~~~~~~~~~~~~~~~l~~l~~~v~~a~~~G---i~vild~H~~ 124 (380)
T 1edg_A 59 GIKTTKQMIDAIKQKGFNTVRIPVSWHPHVSGSDYKISDVWMNRVQEVVNYCIDNK---MYVILNTHHD 124 (380)
T ss_dssp CSCCCHHHHHHHHHHTCCEEEECCCCGGGEETTTTEECHHHHHHHHHHHHHHHTTT---CEEEEECCSC
T ss_pred CCcccHHHHHHHHHcCCCEEEecccHHhhcCCCCCcCCHHHHHHHHHHHHHHHHCC---CEEEEeCCCc
Confidence 33456889999999999999998865421 222333333333344444 7889998653
No 244
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=50.17 E-value=2e+02 Score=28.45 Aligned_cols=85 Identities=12% Similarity=0.033 Sum_probs=52.5
Q ss_pred cCeeEEcCC-cccccCCCCCHHHHHHHHHHHHHh-cCCc-EEEEeccccccccCCCcChHH-HhHHHHHHHhCCcEEeec
Q 010211 331 SDGAMVARG-DLGAELPIEDVPLLQEDIIRRCRS-MQKP-VIVATNMLESMIDHPTPTRAE-VSDIAIAVREGADAVMLS 406 (515)
Q Consensus 331 sDgImIgrg-DLg~elg~e~v~~aqk~Ii~~c~~-aGKP-vivATqmLeSMi~~~~PtrAE-v~DvanaV~~G~D~vmLs 406 (515)
+|.+=+.++ | + .| .. ...+++++.... .+.| |+++ .+. +..+ ...+..++..|++++..-
T Consensus 191 aD~iKv~~~~~-~--~g--~~-~~~~~vv~~~~~~~~~P~Vv~a---------GG~-~~~~~~~~~~~a~~aGa~Gv~vG 254 (304)
T 1to3_A 191 ADLYKVEMPLY-G--KG--AR-SDLLTASQRLNGHINMPWVILS---------SGV-DEKLFPRAVRVAMEAGASGFLAG 254 (304)
T ss_dssp CSEEEECCGGG-G--CS--CH-HHHHHHHHHHHHTCCSCEEECC---------TTS-CTTTHHHHHHHHHHTTCCEEEES
T ss_pred CCEEEeCCCcC-C--CC--CH-HHHHHHHHhccccCCCCeEEEe---------cCC-CHHHHHHHHHHHHHcCCeEEEEe
Confidence 677766662 3 1 11 22 233344444222 6889 7764 233 3222 445667788899999987
Q ss_pred ccccCC----CCHHHHH--------HHHHHHHHHHhc
Q 010211 407 GETAHG----KFPLKAV--------KVMHTVALRTES 431 (515)
Q Consensus 407 ~ETa~G----~yPveaV--------~~m~~I~~~aE~ 431 (515)
.-+-.. +-|.+++ +.+.+++.+...
T Consensus 255 RaI~q~~~~~~dp~~~~~~~~~~~~~~l~~iv~~~~~ 291 (304)
T 1to3_A 255 RAVWSSVIGLPDTELMLRDVSAPKLQRLGEIVDEMMG 291 (304)
T ss_dssp HHHHGGGTTCSCHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred hHHhCccccCCCHHHHHHhhchHHHHHHHHHHhcCCC
Confidence 666656 8899999 888888877553
No 245
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=50.10 E-value=2e+02 Score=28.30 Aligned_cols=154 Identities=16% Similarity=0.109 Sum_probs=97.9
Q ss_pred CCHhhHHHh-hcchhcCCcEEEecc-cCCHHHHHHHHHHHHhcCCCceEEEEecC-hhhhhcHHHHHhh-----cC--ee
Q 010211 265 ITDKDWEDI-KFGVDNQVDFYAVSF-VKDAKVVHELKDYLKSCNADIHVIVKIES-ADSIPNLHSIISA-----SD--GA 334 (515)
Q Consensus 265 ltekD~~dI-~~al~~gvD~ValSf-Vrsa~dv~~vr~~l~~~~~~i~IIaKIEt-~~aveNldeIl~~-----sD--gI 334 (515)
++.+|+..| +.-.+.|+|.|=+.| ..++.|...++...+. .++..+.+-+-+ ..++ +..++. .| .+
T Consensus 24 ~~~~~K~~i~~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~-~~~~~i~~l~~~~~~di---~~a~~~~~~ag~~~v~i 99 (293)
T 3ewb_X 24 FDVKEKIQIALQLEKLGIDVIEAGFPISSPGDFECVKAIAKA-IKHCSVTGLARCVEGDI---DRAEEALKDAVSPQIHI 99 (293)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEECGGGCHHHHHHHHHHHHH-CCSSEEEEEEESSHHHH---HHHHHHHTTCSSEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCCCCccHHHHHHHHHHh-cCCCEEEEEecCCHHHH---HHHHHHHhhcCCCEEEE
Confidence 466777555 444567999987654 4466677777765543 456666666543 2333 333332 23 35
Q ss_pred EEcCCcccc----cCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHH-HHHhCCcEEeecccc
Q 010211 335 MVARGDLGA----ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAI-AVREGADAVMLSGET 409 (515)
Q Consensus 335 mIgrgDLg~----elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~Dvan-aV~~G~D~vmLs~ET 409 (515)
+++-.|+-. ....++.....+++++.++++|..|.+... ..+.-+...+.+++. +...|+|.+-|. +|
T Consensus 100 ~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~~~~~------d~~~~~~~~~~~~~~~~~~~G~~~i~l~-DT 172 (293)
T 3ewb_X 100 FLATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQFSPE------DATRSDRAFLIEAVQTAIDAGATVINIP-DT 172 (293)
T ss_dssp EEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEEEEEE------TGGGSCHHHHHHHHHHHHHTTCCEEEEE-CS
T ss_pred EecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEEEEec------cCCCCCHHHHHHHHHHHHHcCCCEEEec-CC
Confidence 566566532 233467778889999999999999876431 112222333455544 456799999885 88
Q ss_pred cCCCCHHHHHHHHHHHHHHH
Q 010211 410 AHGKFPLKAVKVMHTVALRT 429 (515)
Q Consensus 410 a~G~yPveaV~~m~~I~~~a 429 (515)
.=.-.|.+.-+.+..+..+.
T Consensus 173 ~G~~~P~~v~~lv~~l~~~~ 192 (293)
T 3ewb_X 173 VGYTNPTEFGQLFQDLRREI 192 (293)
T ss_dssp SSCCCHHHHHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHHHHHHHhc
Confidence 87889998888888877665
No 246
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=49.93 E-value=51 Score=32.37 Aligned_cols=97 Identities=21% Similarity=0.181 Sum_probs=57.2
Q ss_pred HHhhcchhcCCcEEEec------ccCCHHHHHH-HHHHHHhcCCCceEEEEec---ChhhhhcHHHHHhh-cCeeEEcCC
Q 010211 271 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 339 (515)
Q Consensus 271 ~dI~~al~~gvD~ValS------fVrsa~dv~~-vr~~l~~~~~~i~IIaKIE---t~~aveNldeIl~~-sDgImIgrg 339 (515)
+.++|-++.|+|++.+. +.-+.++-.+ ++...+..+.+++||+-+= |.++++......+. +|++|+-+-
T Consensus 26 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~~~t~~ai~la~~a~~~Gadavlv~~P 105 (291)
T 3a5f_A 26 ELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTGSNNTAASIAMSKWAESIGVDGLLVITP 105 (291)
T ss_dssp HHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 45577788999998762 2333433333 3444455567899999884 46777766666555 899998754
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcCCcEEEE
Q 010211 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (515)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aGKPvivA 371 (515)
...- +.-..+.+..-+.|.+.+.|+++.
T Consensus 106 ~y~~----~s~~~l~~~f~~ia~a~~lPiilY 133 (291)
T 3a5f_A 106 YYNK----TTQKGLVKHFKAVSDAVSTPIIIY 133 (291)
T ss_dssp CSSC----CCHHHHHHHC-CTGGGCCSCEEEE
T ss_pred CCCC----CCHHHHHHHHHHHHHhcCCCEEEE
Confidence 3311 121222222223355567888774
No 247
>3l55_A B-1,4-endoglucanase/cellulase; putative beta-1,4-endoglucanase, glycosyl hydrolase family 5, mixed alpha-beta, TIM barrel; HET: MSE; 1.60A {Prevotella bryantii} PDB: 3vdh_A*
Probab=49.90 E-value=27 Score=35.38 Aligned_cols=55 Identities=13% Similarity=0.265 Sum_probs=37.3
Q ss_pred CCCHHHHHHHHHhCCcEEEEecCCCC-------h-HHHHHHHHHHHHHHhhcCCceEEEEEecCCC
Q 010211 111 TSSREMIWKLAEEGMNVARLNMSHGD-------H-ASHQKTIDLVKEYNSQFEDKAVAIMLDTKGP 168 (515)
Q Consensus 111 s~~~e~i~~li~aGm~v~RiN~SHg~-------~-e~~~~~i~~ir~~~~~~~~~~i~I~lDL~GP 168 (515)
-.+.+.++.|.+.|+|++||-++... . +...+.++.+=+...+.| +.+++|+-.-
T Consensus 52 ~~t~~di~~ik~~G~N~vRipi~w~~~~~~~g~~d~~~l~~ld~vVd~a~~~G---i~vIldlH~~ 114 (353)
T 3l55_A 52 ETTQDMMTFLMQNGFNAVRIPVTWYEHMDAEGNVDEAWMMRVKAIVEYAMNAG---LYAIVNVHHD 114 (353)
T ss_dssp CCCHHHHHHHHHTTEEEEEECCCCGGGBCTTCCBCHHHHHHHHHHHHHHHHHT---CEEEEECCTT
T ss_pred CCCHHHHHHHHHcCCCEEEEcccHHHhcCCCCCcCHHHHHHHHHHHHHHHHCC---CEEEEECCCC
Confidence 34789999999999999999987532 1 233344444444444555 7888998653
No 248
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=49.37 E-value=83 Score=30.32 Aligned_cols=118 Identities=18% Similarity=0.100 Sum_probs=65.9
Q ss_pred HHhhcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhhcCeeE-E-cCCcc-cccCCC
Q 010211 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAM-V-ARGDL-GAELPI 347 (515)
Q Consensus 271 ~dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDgIm-I-grgDL-g~elg~ 347 (515)
+.++.+.+.|+|++.++-.. .+++..+.+++++.|-+. +.-+.-....+.+++|++.+++.. + ..-.. |..-+.
T Consensus 113 ~~~~~~~~aGadgii~~d~~-~e~~~~~~~~~~~~g~~~--i~l~~p~t~~~~i~~i~~~~~g~v~~~s~~G~tG~~~~~ 189 (268)
T 1qop_A 113 AFYARCEQVGVDSVLVADVP-VEESAPFRQAALRHNIAP--IFICPPNADDDLLRQVASYGRGYTYLLSRSGVTGAENRG 189 (268)
T ss_dssp HHHHHHHHHTCCEEEETTCC-GGGCHHHHHHHHHTTCEE--ECEECTTCCHHHHHHHHHHCCSCEEEESSSSCCCSSSCC
T ss_pred HHHHHHHHcCCCEEEEcCCC-HHHHHHHHHHHHHcCCcE--EEEECCCCCHHHHHHHHhhCCCcEEEEecCCcCCCccCC
Confidence 44555667899999887554 456777778887766442 223322234567888888877542 2 21111 111111
Q ss_pred -CCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeec
Q 010211 348 -EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (515)
Q Consensus 348 -e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs 406 (515)
+.+....+++-+ ..+.|+.+.. +.-|.. ++..++..|+|+++.-
T Consensus 190 ~~~~~~~i~~lr~---~~~~pi~vgg---------GI~t~e---~~~~~~~agAD~vVVG 234 (268)
T 1qop_A 190 ALPLHHLIEKLKE---YHAAPALQGF---------GISSPE---QVSAAVRAGAAGAISG 234 (268)
T ss_dssp --CCHHHHHHHHH---TTCCCEEEES---------SCCSHH---HHHHHHHTTCSEEEEC
T ss_pred CchHHHHHHHHHh---ccCCcEEEEC---------CCCCHH---HHHHHHHcCCCEEEEC
Confidence 223333333322 2378988742 333322 3456688999999974
No 249
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=49.32 E-value=1.1e+02 Score=30.81 Aligned_cols=154 Identities=12% Similarity=0.116 Sum_probs=89.4
Q ss_pred CCCCCHhhHHHh-hcch-hcCCcEEEecccCCHHHHHHHHHHHHhcC---CCceEEEEecChhhhhcHHHHHhh------
Q 010211 262 LPSITDKDWEDI-KFGV-DNQVDFYAVSFVKDAKVVHELKDYLKSCN---ADIHVIVKIESADSIPNLHSIISA------ 330 (515)
Q Consensus 262 lp~ltekD~~dI-~~al-~~gvD~ValSfVrsa~dv~~vr~~l~~~~---~~i~IIaKIEt~~aveNldeIl~~------ 330 (515)
-|..|+.|.+.+ +.|. ++++..|+++ +..|..+++.|+..+ .++.|.+=|==|.|-...+..+..
T Consensus 36 ~p~~T~e~I~~lc~eA~~~~~~aaVCV~----P~~V~~a~~~L~~~~~~~s~v~V~tVigFP~G~~~~e~K~~Ea~~Av~ 111 (297)
T 4eiv_A 36 TDGETNESVAAVCKIAAKDPAIVGVSVR----PAFVRFIRQELVKSAPEVAGIKVCAAVNFPEGTGTPDTVSLEAVGALK 111 (297)
T ss_dssp STTCCHHHHHHHHHHHHSSSCCSEEEEC----GGGHHHHHHTGGGTCGGGGGSEEEEEESTTTCCCCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhhcCcEEEEEC----HHHHHHHHHHhcccCcCCCCCeEEEEecCCCCCCCHHHHHHHHHHHHH
Confidence 356678887555 6677 6787777764 556777888887644 467777777656665555444432
Q ss_pred -----cCeeEEcCCccccc--CCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHH-HhHH-HHHHHhCCc
Q 010211 331 -----SDGAMVARGDLGAE--LPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDI-AIAVREGAD 401 (515)
Q Consensus 331 -----sDgImIgrgDLg~e--lg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAE-v~Dv-anaV~~G~D 401 (515)
.|.+ |..|-|--. =.++.|..-.+.+.++|...-..||+-| ..-+..| +... --++..|+|
T Consensus 112 ~GAdEIDmV-inig~lk~~~~g~~~~V~~eI~~v~~a~~~~~lKVIlEt---------~~Lt~~e~i~~A~~ia~~AGAD 181 (297)
T 4eiv_A 112 DGADEIECL-IDWRRMNENVADGESRIRLLVSEVKKVVGPKTLKVVLSG---------GELQGGDIISRAAVAALEGGAD 181 (297)
T ss_dssp TTCSEEEEE-CCTHHHHHCHHHHHHHHHHHHHHHHHHHTTSEEEEECCS---------SCCCCHHHHHHHHHHHHHHTCS
T ss_pred cCCCEEEee-eeHHHHhcccCCcHHHHHHHHHHHHHHhcCCceEEEEec---------ccCCcHHHHHHHHHHHHHhCCC
Confidence 2222 122221110 0123455555667777743334456633 4444455 3332 335678999
Q ss_pred EEeecccccCCCCHHHHHHHHHHHHHHH
Q 010211 402 AVMLSGETAHGKFPLKAVKVMHTVALRT 429 (515)
Q Consensus 402 ~vmLs~ETa~G~yPveaV~~m~~I~~~a 429 (515)
.|=-|.-=..|.--++.|+.|.+.+++.
T Consensus 182 FVKTSTGf~~~gAT~edV~lM~~~v~~~ 209 (297)
T 4eiv_A 182 FLQTSSGLGATHATMFTVHLISIALREY 209 (297)
T ss_dssp EEECCCSSSSCCCCHHHHHHHHHHHHHH
T ss_pred EEEcCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 9887643333344579999999999754
No 250
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=48.78 E-value=24 Score=37.45 Aligned_cols=110 Identities=14% Similarity=0.170 Sum_probs=0.0
Q ss_pred hhHHHhhcchhcCCcEEEe---cccCCHHHHHHHHHHHHhcCCCceEEE--EecChhhhhcHHHHHhhcCeeEEcCCccc
Q 010211 268 KDWEDIKFGVDNQVDFYAV---SFVKDAKVVHELKDYLKSCNADIHVIV--KIESADSIPNLHSIISASDGAMVARGDLG 342 (515)
Q Consensus 268 kD~~dI~~al~~gvD~Val---SfVrsa~dv~~vr~~l~~~~~~i~IIa--KIEt~~aveNldeIl~~sDgImIgrgDLg 342 (515)
++.++++.+++.|+|+|++ ..-...-|+....+++.....++.+|+ -|-|++-+..+-+. +||+.|| +
T Consensus 165 h~~eE~~~A~~lga~iIGinnr~L~t~~~dl~~~~~L~~~ip~~~~vIaEsGI~t~edv~~~~~~---a~avLVG----e 237 (452)
T 1pii_A 165 SNEEEQERAIALGAKVVGINNRDLRDLSIDLNRTRELAPKLGHNVTVISESGINTYAQVRELSHF---ANGFLIG----S 237 (452)
T ss_dssp CSHHHHHHHHHTTCSEEEEESEETTTTEECTHHHHHHHHHHCTTSEEEEESCCCCHHHHHHHTTT---CSEEEEC----H
T ss_pred CCHHHHHHHHHCCCCEEEEeCCCCCCCCCCHHHHHHHHHhCCCCCeEEEECCCCCHHHHHHHHHh---CCEEEEc----H
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEE
Q 010211 343 AELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAV 403 (515)
Q Consensus 343 ~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~v 403 (515)
.=|..++...+.++++ ...-|-+|+ |+.| |+..++..|+|++
T Consensus 238 almr~~d~~~~~~~l~---~~~~KICGi--------------t~~e--da~~a~~~Gad~i 279 (452)
T 1pii_A 238 ALMAHDDLHAAVRRVL---LGENKVCGL--------------TRGQ--DAKAAYDAGAIYG 279 (452)
T ss_dssp HHHTCSCHHHHHHHHH---HCSCEECCC--------------CSHH--HHHHHHHHTCSEE
T ss_pred HHcCCcCHHHHHHHHH---HHhccccCC--------------CcHH--HHHHHHhcCCCEE
No 251
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=48.70 E-value=1.2e+02 Score=29.83 Aligned_cols=95 Identities=17% Similarity=0.037 Sum_probs=55.9
Q ss_pred HHHHhh-cCeeEEcCCc--ccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHH-HhHHHHHHHhCC
Q 010211 325 HSIISA-SDGAMVARGD--LGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGA 400 (515)
Q Consensus 325 deIl~~-sDgImIgrgD--Lg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAE-v~DvanaV~~G~ 400 (515)
+-.++. +|||++. |= =+..+..++-..+.+.+++.++ -..||+..+ +..+-.| +...-.+-..|+
T Consensus 39 ~~li~~Gv~Gl~v~-GtTGE~~~Ls~eEr~~v~~~~~~~~~-grvpViaGv---------g~~~t~~ai~la~~A~~~Ga 107 (303)
T 2wkj_A 39 QFNIQQGIDGLYVG-GSTGEAFVQSLSEREQVLEIVAEEAK-GKIKLIAHV---------GCVSTAESQQLAASAKRYGF 107 (303)
T ss_dssp HHHHHTTCSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHT-TTSEEEEEC---------CCSSHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCCEEEEC-eeccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEec---------CCCCHHHHHHHHHHHHhCCC
Confidence 334444 8999885 21 1122233444455555555543 247888743 4444445 555556667799
Q ss_pred cEEeecccccCCCCHHHHHHHHHHHHHHHh
Q 010211 401 DAVMLSGETAHGKFPLKAVKVMHTVALRTE 430 (515)
Q Consensus 401 D~vmLs~ETa~G~yPveaV~~m~~I~~~aE 430 (515)
|++|+..=--...-+-+.++....|+..+.
T Consensus 108 davlv~~P~y~~~s~~~l~~~f~~va~a~~ 137 (303)
T 2wkj_A 108 DAVSAVTPFYYPFSFEEHCDHYRAIIDSAD 137 (303)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHHHHT
T ss_pred CEEEecCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 999986332223335677888999988776
No 252
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=48.52 E-value=98 Score=30.33 Aligned_cols=95 Identities=21% Similarity=0.181 Sum_probs=54.5
Q ss_pred HHHHhh-cCeeEEcCCc--ccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHH-HhHHHHHHHhCC
Q 010211 325 HSIISA-SDGAMVARGD--LGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGA 400 (515)
Q Consensus 325 deIl~~-sDgImIgrgD--Lg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAE-v~DvanaV~~G~ 400 (515)
+-.++. +||+++. |= =+..+..++-..+.+.+++.++. ..||+..| +..+-.| +...-.+-..|+
T Consensus 28 ~~li~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~g-rvpviaGv---------g~~~t~~ai~la~~A~~~Ga 96 (294)
T 2ehh_A 28 EFHVDNGTDAILVC-GTTGESPTLTFEEHEKVIEFAVKRAAG-RIKVIAGT---------GGNATHEAVHLTAHAKEVGA 96 (294)
T ss_dssp HHHHTTTCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTT-SSEEEEEC---------CCSCHHHHHHHHHHHHHTTC
T ss_pred HHHHHCCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEec---------CCCCHHHHHHHHHHHHhcCC
Confidence 334444 8999885 21 11222224444445555554432 47888743 4444455 555556677899
Q ss_pred cEEeecccccCCCCHHHHHHHHHHHHHHHh
Q 010211 401 DAVMLSGETAHGKFPLKAVKVMHTVALRTE 430 (515)
Q Consensus 401 D~vmLs~ETa~G~yPveaV~~m~~I~~~aE 430 (515)
|++|+..=--...-+-+.++....|+..+.
T Consensus 97 davlv~~P~y~~~s~~~l~~~f~~va~a~~ 126 (294)
T 2ehh_A 97 DGALVVVPYYNKPTQRGLYEHFKTVAQEVD 126 (294)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHHHCC
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999986332223335677888888887664
No 253
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=47.98 E-value=22 Score=35.00 Aligned_cols=53 Identities=21% Similarity=0.246 Sum_probs=42.7
Q ss_pred HHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHhhcCCceEEEEEecCCCee
Q 010211 115 EMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEV 170 (515)
Q Consensus 115 e~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~~~~~~~~~~i~I~lDL~GPkI 170 (515)
+..++|+++|.++.=+|+--...++.+++...|+.+.+..+ ++|.+|+.=|++
T Consensus 38 ~~a~~~v~~GAdiIDIg~~s~~~eE~~rv~~vi~~l~~~~~---~pisIDT~~~~v 90 (271)
T 2yci_X 38 EWARRQAEKGAHYLDVNTGPTADDPVRVMEWLVKTIQEVVD---LPCCLDSTNPDA 90 (271)
T ss_dssp HHHHHHHHTTCSEEEEECCSCSSCHHHHHHHHHHHHHHHCC---CCEEEECSCHHH
T ss_pred HHHHHHHHCCCCEEEEcCCcCchhHHHHHHHHHHHHHHhCC---CeEEEeCCCHHH
Confidence 45678999999999999977777889999888888877655 567889865543
No 254
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=47.48 E-value=1.1e+02 Score=31.02 Aligned_cols=95 Identities=20% Similarity=0.189 Sum_probs=52.0
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh-cCeeEEcC-CcccccCCCCCHHHHHHHHHHHHHhcCCcE
Q 010211 291 DAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVAR-GDLGAELPIEDVPLLQEDIIRRCRSMQKPV 368 (515)
Q Consensus 291 sa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDgImIgr-gDLg~elg~e~v~~aqk~Ii~~c~~aGKPv 368 (515)
+.+++..+++.. +.+|++|.= ...+......+. +|+|.|.- |-=....|... ..+..++.+++. ..+||
T Consensus 217 ~~~~i~~lr~~~-----~~PvivK~v--~~~e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~-~~~l~~v~~~v~-~~ipV 287 (368)
T 2nli_A 217 SPRDIEEIAGHS-----GLPVFVKGI--QHPEDADMAIKRGASGIWVSNHGARQLYEAPGS-FDTLPAIAERVN-KRVPI 287 (368)
T ss_dssp CHHHHHHHHHHS-----SSCEEEEEE--CSHHHHHHHHHTTCSEEEECCGGGTSCSSCCCH-HHHHHHHHHHHT-TSSCE
T ss_pred hHHHHHHHHHHc-----CCCEEEEcC--CCHHHHHHHHHcCCCEEEEcCCCcCCCCCCCCh-HHHHHHHHHHhC-CCCeE
Confidence 455666666543 467788721 122333333334 89999842 10001223332 244444444332 25888
Q ss_pred EEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeec
Q 010211 369 IVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (515)
Q Consensus 369 ivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs 406 (515)
|. ..+.-+ -.|+..++..|+|+||+.
T Consensus 288 ia---------~GGI~~---g~D~~kalalGAd~V~iG 313 (368)
T 2nli_A 288 VF---------DSGVRR---GEHVAKALASGADVVALG 313 (368)
T ss_dssp EE---------CSSCCS---HHHHHHHHHTTCSEEEEC
T ss_pred EE---------ECCCCC---HHHHHHHHHcCCCEEEEC
Confidence 87 334433 347889999999999985
No 255
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=47.44 E-value=80 Score=31.43 Aligned_cols=133 Identities=14% Similarity=0.124 Sum_probs=0.0
Q ss_pred CCCCCCHhhHHHhhcchhcCCcEEEecc-------------cCCHHHHHHHHHHHHhcCCCceEEEEecC-------hhh
Q 010211 261 NLPSITDKDWEDIKFGVDNQVDFYAVSF-------------VKDAKVVHELKDYLKSCNADIHVIVKIES-------ADS 320 (515)
Q Consensus 261 ~lp~ltekD~~dI~~al~~gvD~ValSf-------------Vrsa~dv~~vr~~l~~~~~~i~IIaKIEt-------~~a 320 (515)
.+..+|-+|.--.+.+-+.|+|.+.++. --+-+++...-..+.+..+..+|++=.+- .++
T Consensus 35 ~i~~~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pfgsy~~s~~~a 114 (281)
T 1oy0_A 35 KWAMLTAYDYSTARIFDEAGIPVLLVGDSAANVVYGYDTTVPISIDELIPLVRGVVRGAPHALVVADLPFGSYEAGPTAA 114 (281)
T ss_dssp CEEEEECCSHHHHHHHHTTTCCEEEECTTHHHHTTCCSSSSSCCGGGTHHHHHHHHHHCTTSEEEEECCTTSSTTCHHHH
T ss_pred cEEEEeCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhcCCCCeEEEECCCCcccCCHHHH
Q ss_pred hhcHHHHHh-h-cCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEE-------EEeccccccccCCCcChHH--H
Q 010211 321 IPNLHSIIS-A-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVI-------VATNMLESMIDHPTPTRAE--V 389 (515)
Q Consensus 321 veNldeIl~-~-sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvi-------vATqmLeSMi~~~~PtrAE--v 389 (515)
++|.-.+++ . +++|-+-=| .-+...|+++.++|+||+ -..+.+......++..+++ +
T Consensus 115 ~~na~rl~~eaGa~aVklEdg------------~e~~~~I~al~~agIpV~gHiGLtPqsv~~~ggf~v~grt~~a~~~i 182 (281)
T 1oy0_A 115 LAAATRFLKDGGAHAVKLEGG------------ERVAEQIACLTAAGIPVMAHIGFTPQSVNTLGGFRVQGRGDAAEQTI 182 (281)
T ss_dssp HHHHHHHHHTTCCSEEEEEBS------------GGGHHHHHHHHHHTCCEEEEEECCC--------------CHHHHHHH
T ss_pred HHHHHHHHHHhCCeEEEECCc------------HHHHHHHHHHHHCCCCEEeeecCCcceecccCCeEEEeCcHHHHHHH
Q ss_pred hHHHHHHHhCCcEEee
Q 010211 390 SDIAIAVREGADAVML 405 (515)
Q Consensus 390 ~DvanaV~~G~D~vmL 405 (515)
.|.-.+...|+|+++|
T Consensus 183 ~rA~a~~eAGA~~ivl 198 (281)
T 1oy0_A 183 ADAIAVAEAGAFAVVM 198 (281)
T ss_dssp HHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHcCCcEEEE
No 256
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=47.34 E-value=1.5e+02 Score=27.30 Aligned_cols=121 Identities=8% Similarity=0.113 Sum_probs=65.5
Q ss_pred HHhhcchhcCCcEEEec-ccC-----CHHHHHHHHHHHHhcCCCceEEE-E--ec--C----hhhhhcHHHHHhh-----
Q 010211 271 EDIKFGVDNQVDFYAVS-FVK-----DAKVVHELKDYLKSCNADIHVIV-K--IE--S----ADSIPNLHSIISA----- 330 (515)
Q Consensus 271 ~dI~~al~~gvD~ValS-fVr-----sa~dv~~vr~~l~~~~~~i~IIa-K--IE--t----~~aveNldeIl~~----- 330 (515)
+.++.+.+.|.|+|-+. .-. +..++.++++.+++.|-.+..+. - +- . .++++.+...++.
T Consensus 18 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG 97 (278)
T 1i60_A 18 LDLELCEKHGYDYIEIRTMDKLPEYLKDHSLDDLAEYFQTHHIKPLALNALVFFNNRDEKGHNEIITEFKGMMETCKTLG 97 (278)
T ss_dssp HHHHHHHHTTCSEEEEETTTHHHHHTTSSCHHHHHHHHHTSSCEEEEEEEEECCSSCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCCEEEEccHHHHHHHhccCCHHHHHHHHHHcCCCeeeeccccccccCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 45677778899999887 321 23567778888887765543221 1 11 1 1235555555543
Q ss_pred cCeeEEcCCcccccCC----CCCHHHHHHHHHHHHHhcCCcEEEEeccccccccC--CCcChHHHhHHHHHH
Q 010211 331 SDGAMVARGDLGAELP----IEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDH--PTPTRAEVSDIAIAV 396 (515)
Q Consensus 331 sDgImIgrgDLg~elg----~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~--~~PtrAEv~DvanaV 396 (515)
++.|.+.+|.-.-..+ ++.+....+++.+.+.++|..+.+ |.+-.. ...+..+..++...+
T Consensus 98 ~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~l-----En~~~~~~~~~~~~~~~~l~~~~ 164 (278)
T 1i60_A 98 VKYVVAVPLVTEQKIVKEEIKKSSVDVLTELSDIAEPYGVKIAL-----EFVGHPQCTVNTFEQAYEIVNTV 164 (278)
T ss_dssp CCEEEEECCBCSSCCCHHHHHHHHHHHHHHHHHHHGGGTCEEEE-----ECCCCTTBSSCSHHHHHHHHHHH
T ss_pred CCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCEEEE-----EecCCccchhcCHHHHHHHHHHh
Confidence 4666664443111111 234555667777777888876665 333222 233445555554444
No 257
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=47.12 E-value=1.4e+02 Score=29.23 Aligned_cols=95 Identities=21% Similarity=0.246 Sum_probs=55.7
Q ss_pred HHHHhh-cCeeEEcCCcc--cccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHH-HhHHHHHHHhCC
Q 010211 325 HSIISA-SDGAMVARGDL--GAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGA 400 (515)
Q Consensus 325 deIl~~-sDgImIgrgDL--g~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAE-v~DvanaV~~G~ 400 (515)
+-.++. +||+++. |=- +..+..++-..+.+.+++.++ -..||+..+ +..+-.| +...-.+-..|+
T Consensus 30 ~~li~~Gv~gl~v~-GttGE~~~Lt~~Er~~v~~~~~~~~~-grvpviaGv---------g~~~t~~ai~la~~a~~~Ga 98 (292)
T 3daq_A 30 NFLLENNAQAIIVN-GTTAESPTLTTDEKELILKTVIDLVD-KRVPVIAGT---------GTNDTEKSIQASIQAKALGA 98 (292)
T ss_dssp HHHHHTTCCEEEES-SGGGTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEEC---------CCSCHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCCEEEEC-ccccccccCCHHHHHHHHHHHHHHhC-CCCcEEEeC---------CcccHHHHHHHHHHHHHcCC
Confidence 444444 8999985 211 112222344444455555442 346888743 4444455 555556667799
Q ss_pred cEEeecccccCCCCHHHHHHHHHHHHHHHh
Q 010211 401 DAVMLSGETAHGKFPLKAVKVMHTVALRTE 430 (515)
Q Consensus 401 D~vmLs~ETa~G~yPveaV~~m~~I~~~aE 430 (515)
|++|+..=--...-+-+.++..+.|+..++
T Consensus 99 davlv~~P~y~~~~~~~l~~~f~~ia~a~~ 128 (292)
T 3daq_A 99 DAIMLITPYYNKTNQRGLVKHFEAIADAVK 128 (292)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHHHHC
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 999986332223335678889999988875
No 258
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=46.99 E-value=52 Score=30.37 Aligned_cols=85 Identities=20% Similarity=0.234 Sum_probs=51.0
Q ss_pred HHhhcchhcCCcEEEecccC---C-----HHHHHHHHHHHHhcCCCceEEE--EecChhhhhcHHHHHhh-cCeeEEcCC
Q 010211 271 EDIKFGVDNQVDFYAVSFVK---D-----AKVVHELKDYLKSCNADIHVIV--KIESADSIPNLHSIISA-SDGAMVARG 339 (515)
Q Consensus 271 ~dI~~al~~gvD~ValSfVr---s-----a~dv~~vr~~l~~~~~~i~IIa--KIEt~~aveNldeIl~~-sDgImIgrg 339 (515)
+++..+.+.|+|+|.++.+- + +.++..++++.+.. ++++++ -| | .+|+.+.++. +||+.+|++
T Consensus 121 ~~~~~a~~~gaD~i~~~~~f~~~~~~g~~~~~~~~l~~~~~~~--~~pvia~GGI-~---~~nv~~~~~~Ga~gv~vgs~ 194 (221)
T 1yad_A 121 EEAVQAEKEDADYVLFGHVFETDCKKGLEGRGVSLLSDIKQRI--SIPVIAIGGM-T---PDRLRDVKQAGADGIAVMSG 194 (221)
T ss_dssp HHHHHHHHTTCSEEEEECCC----------CHHHHHHHHHHHC--CSCEEEESSC-C---GGGHHHHHHTTCSEEEESHH
T ss_pred HHHHHHHhCCCCEEEECCccccCCCCCCCCCCHHHHHHHHHhC--CCCEEEECCC-C---HHHHHHHHHcCCCEEEEhHH
Confidence 34555667899999987541 1 12344555544433 445544 45 4 3677888777 999999976
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcC
Q 010211 340 DLGAELPIEDVPLLQEDIIRRCRSMQ 365 (515)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aG 365 (515)
=+.. ++.....+++.++.++.+
T Consensus 195 i~~~----~d~~~~~~~~~~~~~~~~ 216 (221)
T 1yad_A 195 IFSS----AEPLEAARRYSRKLKEMR 216 (221)
T ss_dssp HHTS----SSHHHHHHHHHHHHHHHC
T ss_pred hhCC----CCHHHHHHHHHHHHHHhh
Confidence 4432 345556666666655543
No 259
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=46.93 E-value=1.2e+02 Score=30.19 Aligned_cols=110 Identities=21% Similarity=0.110 Sum_probs=58.7
Q ss_pred hHHHhhcchhcCC-cEEEecccCCHHHHHHHHHHHHhcCCCceEEEEe--cChhhhhcHHHHHhh-cCeeEEcCCccccc
Q 010211 269 DWEDIKFGVDNQV-DFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKI--ESADSIPNLHSIISA-SDGAMVARGDLGAE 344 (515)
Q Consensus 269 D~~dI~~al~~gv-D~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKI--Et~~aveNldeIl~~-sDgImIgrgDLg~e 344 (515)
+.+....+.+.|. .++...++ +++.+.+.-+.+.+.-+ ..+.+.+ -++.--+.++...+. +|+|.++-|.
T Consensus 25 ~~~la~av~~aG~lG~i~~~~~-~~~~~~~~i~~i~~~~~-~p~gvnl~~~~~~~~~~~~~a~~~g~d~V~~~~g~---- 98 (332)
T 2z6i_A 25 DGDLAGAVSKAGGLGIIGGGNA-PKEVVKANIDKIKSLTD-KPFGVNIMLLSPFVEDIVDLVIEEGVKVVTTGAGN---- 98 (332)
T ss_dssp CHHHHHHHHHHTSBEEEECTTC-CHHHHHHHHHHHHHHCC-SCEEEEECTTSTTHHHHHHHHHHTTCSEEEECSSC----
T ss_pred cHHHHHHHHhCCCcEEeCCCCC-CHHHHHHHHHHHHHhcC-CCEEEEecCCCCCHHHHHHHHHHCCCCEEEECCCC----
Confidence 3445555556665 66666654 55555443333333222 2233333 233212223333344 8999987542
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecc
Q 010211 345 LPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 407 (515)
Q Consensus 345 lg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ 407 (515)
+ .++++.+++.|.|++.-. .+.. +...+...|+|.+.+.+
T Consensus 99 -p--------~~~i~~l~~~g~~v~~~v-----------~~~~---~a~~~~~~GaD~i~v~g 138 (332)
T 2z6i_A 99 -P--------SKYMERFHEAGIIVIPVV-----------PSVA---LAKRMEKIGADAVIAEG 138 (332)
T ss_dssp -G--------GGTHHHHHHTTCEEEEEE-----------SSHH---HHHHHHHTTCSCEEEEC
T ss_pred -h--------HHHHHHHHHcCCeEEEEe-----------CCHH---HHHHHHHcCCCEEEEEC
Confidence 2 235666777899998632 1212 23356678999999964
No 260
>3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A*
Probab=46.90 E-value=45 Score=33.50 Aligned_cols=53 Identities=17% Similarity=0.256 Sum_probs=34.5
Q ss_pred CCHHHHHHHHHhCCcEEEEecCCCC-----h-----HHHHHHHHHHHHHHhhcCCceEEEEEecCC
Q 010211 112 SSREMIWKLAEEGMNVARLNMSHGD-----H-----ASHQKTIDLVKEYNSQFEDKAVAIMLDTKG 167 (515)
Q Consensus 112 ~~~e~i~~li~aGm~v~RiN~SHg~-----~-----e~~~~~i~~ir~~~~~~~~~~i~I~lDL~G 167 (515)
.+.+.++.|.+.|+|++||-++... . +...+.++.+=+...+.| +.+++|+-.
T Consensus 63 ~~~~di~~i~~~G~N~vRipi~w~~~~~~~~~~~~~~~~l~~~~~vv~~a~~~G---i~vildlH~ 125 (376)
T 3ayr_A 63 TTEDMFKVLIDNQFNVFRIPTTWSGHFGEAPDYKIDEKWLKRVHEVVDYPYKNG---AFVILNLHH 125 (376)
T ss_dssp CCHHHHHHHHHTTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTT---CEEEEECCS
T ss_pred CcHHHHHHHHHcCCCEEEEeeEChhhcCCCCCCccCHHHHHHHHHHHHHHHHCC---CEEEEECCC
Confidence 4688999999999999999886531 0 122233333333334444 788999865
No 261
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=46.87 E-value=1.7e+02 Score=29.80 Aligned_cols=117 Identities=14% Similarity=0.065 Sum_probs=61.6
Q ss_pred hcCCcEEEeccc-----------CCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHh------hcCeeEEc---
Q 010211 278 DNQVDFYAVSFV-----------KDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIIS------ASDGAMVA--- 337 (515)
Q Consensus 278 ~~gvD~ValSfV-----------rsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~------~sDgImIg--- 337 (515)
+.|+|+|-+.+- .+++.+.++-+.+.+. -++.|++||=----.+++.++++ -+|+|.+-
T Consensus 153 ~~g~d~ielNisCPn~~gg~~l~~~~e~~~~il~av~~~-~~~PV~vKi~p~~d~~~~~~~a~~~~~~Gg~d~I~~~NT~ 231 (354)
T 4ef8_A 153 TEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEV-YPHSFGVKMPPYFDFAHFDAAAEILNEFPKVQFITCINSI 231 (354)
T ss_dssp HHHCCEEEEECSSCCSTTSCCGGGSHHHHHHHHHHHHHH-CCSCEEEEECCCCSHHHHHHHHHHHHTCTTEEEEEECCCE
T ss_pred hcCCCEEEEeCCCCCCCCchhhccCHHHHHHHHHHHHHh-hCCCeEEEecCCCCHHHHHHHHHHHHhCCCccEEEEeccc
Confidence 357888876542 3444444444444433 35789999954323344555554 16777641
Q ss_pred -CC---cc---------cccC-CC--CCH-HHHHHHHHHHHHhc-CCcEEEEeccccccccCCCcChHHHhHHHHHHHhC
Q 010211 338 -RG---DL---------GAEL-PI--EDV-PLLQEDIIRRCRSM-QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREG 399 (515)
Q Consensus 338 -rg---DL---------g~el-g~--e~v-~~aqk~Ii~~c~~a-GKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G 399 (515)
+| |+ .... |+ +.+ +...+.+-+..++. ..|+|.. .+.-+ ..|+..++..|
T Consensus 232 ~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~~~~~ipII~~---------GGI~s---~~da~~~l~aG 299 (354)
T 4ef8_A 232 GNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRCPGKLIFGC---------GGVYT---GEDAFLHVLAG 299 (354)
T ss_dssp EEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHCTTSEEEEE---------SCCCS---HHHHHHHHHHT
T ss_pred CcceeeeccCCccccccccccCCCCCCCCchHHHHHHHHHHHhCCCCCEEEE---------CCcCC---HHHHHHHHHcC
Confidence 10 10 0011 11 223 33444443334343 4787763 34433 34777888999
Q ss_pred CcEEeecc
Q 010211 400 ADAVMLSG 407 (515)
Q Consensus 400 ~D~vmLs~ 407 (515)
+|+||+..
T Consensus 300 Ad~V~vgr 307 (354)
T 4ef8_A 300 ASMVQVGT 307 (354)
T ss_dssp EEEEEECH
T ss_pred CCEEEEhH
Confidence 99999863
No 262
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=46.73 E-value=90 Score=32.20 Aligned_cols=63 Identities=19% Similarity=0.122 Sum_probs=41.8
Q ss_pred hhHHHhhcchhc-CCcEEEecc-------cCCHHHHHHHHHHHHhcCCCceEEEEe-----------cChhhhhcHHHHH
Q 010211 268 KDWEDIKFGVDN-QVDFYAVSF-------VKDAKVVHELKDYLKSCNADIHVIVKI-----------ESADSIPNLHSII 328 (515)
Q Consensus 268 kD~~dI~~al~~-gvD~ValSf-------Vrsa~dv~~vr~~l~~~~~~i~IIaKI-----------Et~~aveNldeIl 328 (515)
.|...|+.+.+. |+++|-++. +-+.+++.++++.+++.|-.+..+.-+ +..+.++|+.+.+
T Consensus 31 ~d~~~L~~i~q~~G~~gIe~~l~~~~~g~~w~~~~i~~lk~~l~~~GL~i~~i~s~~~~~~i~~~~~~r~~~ie~~k~~i 110 (386)
T 3bdk_A 31 KDPVTLEEIKAIPGMQGIVTAVYDVPVGQAWPLENILELKKMVEEAGLEITVIESIPVHEDIKQGKPNRDALIENYKTSI 110 (386)
T ss_dssp TCSSCHHHHHTSTTCCEEEECCCSSCSSSCCCHHHHHHHHHHHHTTTCEEEEEECCCCCHHHHTTCTTHHHHHHHHHHHH
T ss_pred CCHHHHHHHHhcCCCCEEEeCCcccCCCCCCCHHHHHHHHHHHHHcCCEEEEEeccccccccccCcHHHHHHHHHHHHHH
Confidence 444566667788 999987662 346689999999999877655444211 1134667777766
Q ss_pred hh
Q 010211 329 SA 330 (515)
Q Consensus 329 ~~ 330 (515)
..
T Consensus 111 ~~ 112 (386)
T 3bdk_A 111 RN 112 (386)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 263
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=46.39 E-value=1.1e+02 Score=28.43 Aligned_cols=92 Identities=10% Similarity=0.029 Sum_probs=51.9
Q ss_pred HHhhcchhcCCcEEEecc---cCCHHHHHHHHHHHHhcCCCceEEE--Ee-cChhhh-hcHHHHHhh-----cCeeEEcC
Q 010211 271 EDIKFGVDNQVDFYAVSF---VKDAKVVHELKDYLKSCNADIHVIV--KI-ESADSI-PNLHSIISA-----SDGAMVAR 338 (515)
Q Consensus 271 ~dI~~al~~gvD~ValSf---Vrsa~dv~~vr~~l~~~~~~i~IIa--KI-Et~~av-eNldeIl~~-----sDgImIgr 338 (515)
+.++.+.+.|.|+|-+.. ..+. ++.++++.+++.|-.+..+. .+ .....+ +.++..++. +..|.+.+
T Consensus 27 ~~l~~a~~~G~~~vEl~~~~~~~~~-~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~~~ 105 (264)
T 1yx1_A 27 SFLPLLAMAGAQRVELREELFAGPP-DTEALTAAIQLQGLECVFSSPLELWREDGQLNPELEPTLRRAEACGAGWLKVSL 105 (264)
T ss_dssp GGHHHHHHHTCSEEEEEGGGCSSCC-CHHHHHHHHHHTTCEEEEEEEEEEECTTSSBCTTHHHHHHHHHHTTCSEEEEEE
T ss_pred HHHHHHHHcCCCEEEEEHHhcCCCH-HHHHHHHHHHHcCCEEEEecchhhcCCchhHHHHHHHHHHHHHHcCCCEEEEec
Confidence 345667788999987742 1222 67888999988775543222 11 111234 444444443 56666665
Q ss_pred CcccccCCCCCHHHHHHHHHHHHHhcCCcEEE
Q 010211 339 GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIV 370 (515)
Q Consensus 339 gDLg~elg~e~v~~aqk~Ii~~c~~aGKPviv 370 (515)
|+.... + ..+++.+.+.++|..+.+
T Consensus 106 g~~~~~---~----~l~~l~~~a~~~Gv~l~l 130 (264)
T 1yx1_A 106 GLLPEQ---P----DLAALGRRLARHGLQLLV 130 (264)
T ss_dssp ECCCSS---C----CHHHHHHHHTTSSCEEEE
T ss_pred CCCCcH---H----HHHHHHHHHHhcCCEEEE
Confidence 554221 1 456666777777765554
No 264
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=46.29 E-value=2.1e+02 Score=27.71 Aligned_cols=95 Identities=15% Similarity=0.104 Sum_probs=56.3
Q ss_pred HHhhcchhcCCcEEEec------ccCCHHHHHHH-HHHHHhcCCCceEEEEe---cChhhhhcHHHHHhh-cCeeEEcCC
Q 010211 271 EDIKFGVDNQVDFYAVS------FVKDAKVVHEL-KDYLKSCNADIHVIVKI---ESADSIPNLHSIISA-SDGAMVARG 339 (515)
Q Consensus 271 ~dI~~al~~gvD~ValS------fVrsa~dv~~v-r~~l~~~~~~i~IIaKI---Et~~aveNldeIl~~-sDgImIgrg 339 (515)
+.++|-++.|+|++.+. +.-+.++-.++ +...+..+. ||+-+ -|.++++......+. +|++|+-+-
T Consensus 23 ~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g---vi~Gvg~~~t~~ai~la~~A~~~Gadavlv~~P 99 (286)
T 2r91_A 23 NHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARR---VIVQVASLNADEAIALAKYAESRGAEAVASLPP 99 (286)
T ss_dssp HHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSS---EEEECCCSSHHHHHHHHHHHHHTTCSEEEECCS
T ss_pred HHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC---EEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 45577788999998762 33344444343 333444333 88877 347777766666555 899999765
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcCCcEEEE
Q 010211 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (515)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aGKPvivA 371 (515)
...-. +.-..+.+..-+.|.+.+.|+++.
T Consensus 100 ~y~~~---~s~~~l~~~f~~va~a~~lPiilY 128 (286)
T 2r91_A 100 YYFPR---LSERQIAKYFRDLCSAVSIPVFLY 128 (286)
T ss_dssp CSSTT---CCHHHHHHHHHHHHHHCSSCEEEE
T ss_pred cCCCC---CCHHHHHHHHHHHHHhcCCCEEEE
Confidence 44210 122333334444466678999984
No 265
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=46.20 E-value=1e+02 Score=30.53 Aligned_cols=93 Identities=17% Similarity=0.215 Sum_probs=55.0
Q ss_pred HHHHhh-cCeeEEcCCcc--cccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHH-HhHHHHHHHhCC
Q 010211 325 HSIISA-SDGAMVARGDL--GAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGA 400 (515)
Q Consensus 325 deIl~~-sDgImIgrgDL--g~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAE-v~DvanaV~~G~ 400 (515)
+-.++. +|||++. |=- +..+..++-..+.+.+++.+ -..||+..| +..+-+| +...-.+-..|+
T Consensus 36 ~~li~~Gv~Gl~v~-GtTGE~~~Lt~~Er~~v~~~~v~~~--grvpViaGv---------g~~~t~~ai~la~~A~~~Ga 103 (313)
T 3dz1_A 36 DFYAEVGCEGVTVL-GILGEAPKLDAAEAEAVATRFIKRA--KSMQVIVGV---------SAPGFAAMRRLARLSMDAGA 103 (313)
T ss_dssp HHHHHTTCSEEEES-TGGGTGGGSCHHHHHHHHHHHHHHC--TTSEEEEEC---------CCSSHHHHHHHHHHHHHHTC
T ss_pred HHHHHCCCCEEEeC-ccCcChhhCCHHHHHHHHHHHHHHc--CCCcEEEec---------CCCCHHHHHHHHHHHHHcCC
Confidence 334444 8999985 211 12222234444445555555 357888743 4445555 555556677899
Q ss_pred cEEeecccccCCCCHHHHHHHHHHHHHHHh
Q 010211 401 DAVMLSGETAHGKFPLKAVKVMHTVALRTE 430 (515)
Q Consensus 401 D~vmLs~ETa~G~yPveaV~~m~~I~~~aE 430 (515)
|++|+..=-.. .-.-+.++....|+..+.
T Consensus 104 davlv~~P~~~-~s~~~l~~~f~~va~a~~ 132 (313)
T 3dz1_A 104 AGVMIAPPPSL-RTDEQITTYFRQATEAIG 132 (313)
T ss_dssp SEEEECCCTTC-CSHHHHHHHHHHHHHHHC
T ss_pred CEEEECCCCCC-CCHHHHHHHHHHHHHhCC
Confidence 99998632211 224677888999998886
No 266
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=45.81 E-value=98 Score=30.87 Aligned_cols=30 Identities=20% Similarity=0.234 Sum_probs=21.9
Q ss_pred CCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeec
Q 010211 365 QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (515)
Q Consensus 365 GKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs 406 (515)
+.|+|.. .+.-+ -.|+..++..|+|+|++.
T Consensus 251 ~ipvia~---------GGI~~---~~d~~k~l~~GAd~V~iG 280 (349)
T 1p0k_A 251 ASTMIAS---------GGLQD---ALDVAKAIALGASCTGMA 280 (349)
T ss_dssp TSEEEEE---------SSCCS---HHHHHHHHHTTCSEEEEC
T ss_pred CCeEEEE---------CCCCC---HHHHHHHHHcCCCEEEEc
Confidence 6888773 34433 337778899999999986
No 267
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=45.76 E-value=1.3e+02 Score=30.09 Aligned_cols=95 Identities=20% Similarity=0.111 Sum_probs=54.9
Q ss_pred HHHHhh-cCeeEEcCCc--ccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHH-HhHHHHHHHhCC
Q 010211 325 HSIISA-SDGAMVARGD--LGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGA 400 (515)
Q Consensus 325 deIl~~-sDgImIgrgD--Lg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAE-v~DvanaV~~G~ 400 (515)
+-.++. +|||++. |= =+..+..++-..+.+.+++.++. ..||+..+ +..+-.| +...-.+-..|+
T Consensus 62 ~~li~~Gv~Gl~v~-GtTGE~~~Ls~eEr~~vi~~~ve~~~g-rvpViaGv---------g~~st~eai~la~~A~~~Ga 130 (332)
T 2r8w_A 62 ARLDAAEVDSVGIL-GSTGIYMYLTREERRRAIEAAATILRG-RRTLMAGI---------GALRTDEAVALAKDAEAAGA 130 (332)
T ss_dssp HHHHHHTCSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTT-SSEEEEEE---------CCSSHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEec---------CCCCHHHHHHHHHHHHhcCC
Confidence 444444 8999885 21 11222334444555555555432 47888754 3444455 445555667799
Q ss_pred cEEeecccccCCCCHHHHHHHHHHHHHHHh
Q 010211 401 DAVMLSGETAHGKFPLKAVKVMHTVALRTE 430 (515)
Q Consensus 401 D~vmLs~ETa~G~yPveaV~~m~~I~~~aE 430 (515)
|++|+..=--...-+-+.++....|+..+.
T Consensus 131 davlv~~P~Y~~~s~~~l~~~f~~VA~a~~ 160 (332)
T 2r8w_A 131 DALLLAPVSYTPLTQEEAYHHFAAVAGATA 160 (332)
T ss_dssp SEEEECCCCSSCCCHHHHHHHHHHHHHHCS
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999986332223334667888888887664
No 268
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=45.46 E-value=26 Score=36.89 Aligned_cols=48 Identities=23% Similarity=0.439 Sum_probs=38.2
Q ss_pred EEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHH
Q 010211 102 KIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKE 149 (515)
Q Consensus 102 KIi~TiGPss~~~e~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~ 149 (515)
.+.+-+|+.....+.++.|+++|++++=++++||......+.++.+|+
T Consensus 227 ~vga~ig~~~~~~~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~ 274 (494)
T 1vrd_A 227 LVGAAVGTSPETMERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKA 274 (494)
T ss_dssp CCEEEECSSTTHHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHH
T ss_pred ccccccCcCHhHHHHHHHHHHhCCCEEEEEecCCchHHHHHHHHHHHH
Confidence 344456766666889999999999999999999988766677776665
No 269
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=45.06 E-value=74 Score=31.22 Aligned_cols=102 Identities=14% Similarity=0.183 Sum_probs=57.7
Q ss_pred hhH-HHhhcchhcCCcEEEecccCCHHHHHHHHHHHHhcCC-CceEEEEe-------c--ChhhhhcHHHHHhhcCeeEE
Q 010211 268 KDW-EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNA-DIHVIVKI-------E--SADSIPNLHSIISASDGAMV 336 (515)
Q Consensus 268 kD~-~dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~-~i~IIaKI-------E--t~~aveNldeIl~~sDgImI 336 (515)
.|. +-|+.+.+.|++.+.+. --+.++...+.++.++... ...+.+-+ . +.+-++.+++.++.-..+-|
T Consensus 17 ~d~~~vl~~a~~~gV~~~v~~-g~~~~~~~~~~~la~~~~~~~~~v~~~~GiHP~~~~~~~~~~~~~l~~l~~~~~vvaI 95 (287)
T 3rcm_A 17 DQQAAIVERALEAGVTQMLLT-GTSLAVSEQALELCQQLDASGAHLFATAGVHPHDAKAWDTDSERQLRLLLSEPRVRAV 95 (287)
T ss_dssp TCHHHHHHHHHHTTEEEEEEC-CCSHHHHHHHHHHHHHHCTTSSSEEEEECCCGGGGGGCCTTHHHHHHHHHTSTTEEEE
T ss_pred cCHHHHHHHHHHcCCeEEEEe-cCCHHHHHHHHHHHHhCCCCCceEEEEEEECcCccccCCHHHHHHHHHHhcCCCeEEE
Confidence 355 44577888999987665 3467777777776654322 12233322 1 12234445554433334444
Q ss_pred cCCcccccCCCC-CHHH----HHHHHHHHHHhcCCcEEEEe
Q 010211 337 ARGDLGAELPIE-DVPL----LQEDIIRRCRSMQKPVIVAT 372 (515)
Q Consensus 337 grgDLg~elg~e-~v~~----aqk~Ii~~c~~aGKPvivAT 372 (515)
|..|.+.... .-.. +.++.++.|++.|+||++-+
T Consensus 96 --GEiGLD~~~~~~~~~~Q~~~F~~ql~lA~e~~lPv~iH~ 134 (287)
T 3rcm_A 96 --GECGLDFNRDFSPRPLQEKALEAQLTLAAQLRLPVFLHE 134 (287)
T ss_dssp --EEEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred --EEeeeCCCcccCcHHHHHHHHHHHHHHHHHhCCCEEEEc
Confidence 5555554321 1122 44677888999999999965
No 270
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=45.05 E-value=1.5e+02 Score=28.72 Aligned_cols=49 Identities=14% Similarity=0.030 Sum_probs=31.8
Q ss_pred HHHHHHHHHHhc-CCcEEEEeccccccccCCCcChHHHhHHHH-HHHhCCcEEeecccc
Q 010211 353 LQEDIIRRCRSM-QKPVIVATNMLESMIDHPTPTRAEVSDIAI-AVREGADAVMLSGET 409 (515)
Q Consensus 353 aqk~Ii~~c~~a-GKPvivATqmLeSMi~~~~PtrAEv~Dvan-aV~~G~D~vmLs~ET 409 (515)
...+++++.+++ ++|+++= ..+..+..+..+++. +...|+|++.+++=|
T Consensus 145 ~~~~iv~~vr~~~~~Pv~vK--------i~~~~~~~~~~~~a~~~~~~G~d~i~v~~~~ 195 (311)
T 1jub_A 145 ATEKLLKEVFTFFTKPLGVK--------LPPYFDLVHFDIMAEILNQFPLTYVNSVNSI 195 (311)
T ss_dssp HHHHHHHHHTTTCCSCEEEE--------ECCCCSHHHHHHHHHHHTTSCCCEEEECCCE
T ss_pred HHHHHHHHHHHhcCCCEEEE--------ECCCCCHHHHHHHHHHHHHcCCcEEEecCCC
Confidence 346777777766 8999872 234446566655444 345699999987543
No 271
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=44.76 E-value=1.9e+02 Score=28.81 Aligned_cols=142 Identities=15% Similarity=0.168 Sum_probs=81.0
Q ss_pred hHHHhhcchhcCCcEEEec-------ccCCHHHHHHHHHHHHhcCCCceEEEEecChhh------------hhcHHHHHh
Q 010211 269 DWEDIKFGVDNQVDFYAVS-------FVKDAKVVHELKDYLKSCNADIHVIVKIESADS------------IPNLHSIIS 329 (515)
Q Consensus 269 D~~dI~~al~~gvD~ValS-------fVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~a------------veNldeIl~ 329 (515)
+.+++..|.+.|+|.|=+- -..+..-++.++++ .++.|.++|.-+.| .+.++...+
T Consensus 48 s~~~a~~A~~gGAdRIELc~~l~~GGlTPS~g~i~~a~~~-----~~ipV~vMIRPRgGdF~Ys~~E~~~M~~dI~~~~~ 122 (287)
T 3iwp_A 48 SVESAVNAERGGADRIELCSGLSEGGTTPSMGVLQVVKQS-----VQIPVFVMIRPRGGDFLYSDREIEVMKADIRLAKL 122 (287)
T ss_dssp SHHHHHHHHHHTCSEEEECBCGGGTCBCCCHHHHHHHHTT-----CCSCEEEECCSSSSCSCCCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhCCCEEEECCCCCCCCCCCCHHHHHHHHHh-----cCCCeEEEEecCCCCcccCHHHHHHHHHHHHHHHH
Confidence 4567777788899987653 11244455555543 25899999988877 245555555
Q ss_pred h-cCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeeccc
Q 010211 330 A-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGE 408 (515)
Q Consensus 330 ~-sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~E 408 (515)
. +|||.+|- |..+ |--++. ..+++++.+. +.++-+- +.+--.++..+ ..-..+..|+|-|+.||-
T Consensus 123 ~GAdGvVfG~--L~~d-g~iD~~-~~~~Li~~a~--~l~vTFH------RAFD~~~d~~~--Ale~Li~lGvdrILTSG~ 188 (287)
T 3iwp_A 123 YGADGLVFGA--LTED-GHIDKE-LCMSLMAICR--PLPVTFH------RAFDMVHDPMA--ALETLLTLGFERVLTSGC 188 (287)
T ss_dssp TTCSEEEECC--BCTT-SCBCHH-HHHHHHHHHT--TSCEEEC------GGGGGCSCHHH--HHHHHHHHTCSEEEECTT
T ss_pred cCCCEEEEee--eCCC-CCcCHH-HHHHHHHHcC--CCcEEEE------CchhccCCHHH--HHHHHHHcCCCEEECCCC
Confidence 5 89999983 1111 111232 3345566553 3454431 11111122222 122333349999999875
Q ss_pred ccCCCCHHHHHHHHHHHHHHHhcC
Q 010211 409 TAHGKFPLKAVKVMHTVALRTESS 432 (515)
Q Consensus 409 Ta~G~yPveaV~~m~~I~~~aE~~ 432 (515)
.+. ..+.+..+++++..+...
T Consensus 189 ~~~---a~~Gl~~Lk~Lv~~a~~r 209 (287)
T 3iwp_A 189 DSS---ALEGLPLIKRLIEQAKGR 209 (287)
T ss_dssp SSS---TTTTHHHHHHHHHHHTTS
T ss_pred CCC---hHHhHHHHHHHHHHhCCC
Confidence 222 257888888888877654
No 272
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=44.70 E-value=64 Score=30.64 Aligned_cols=54 Identities=17% Similarity=0.202 Sum_probs=41.1
Q ss_pred HHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecccccCCCCHHHHHHHHHHHHH
Q 010211 354 QEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVAL 427 (515)
Q Consensus 354 qk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~ 427 (515)
-+..++.|+++|++|.+-| .+ .| .+...++..|+|+++- +||-.+.+.+.++-.
T Consensus 193 ~~~~v~~~~~~G~~V~~WT-------vn-~~-----~~~~~l~~~GVDgIiT-------D~P~~~~~~~~~~~~ 246 (250)
T 3ks6_A 193 DAGLMAQVQAAGLDFGCWA-------AH-TP-----SQITKALDLGVKVFTT-------DRPTLAIALRTEHRM 246 (250)
T ss_dssp CHHHHHHHHHTTCEEEEEC-------CC-SH-----HHHHHHHHHTCSEEEE-------SCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCEEEEEe-------CC-CH-----HHHHHHHHcCCCEEEc-------CCHHHHHHHHHHhhc
Confidence 4688999999999999876 11 22 2445778899999985 699998888876643
No 273
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=44.70 E-value=1.3e+02 Score=29.27 Aligned_cols=95 Identities=19% Similarity=0.154 Sum_probs=53.9
Q ss_pred HHHHhh-cCeeEEcCCc--ccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHH-HhHHHHHHHhCC
Q 010211 325 HSIISA-SDGAMVARGD--LGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGA 400 (515)
Q Consensus 325 deIl~~-sDgImIgrgD--Lg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAE-v~DvanaV~~G~ 400 (515)
+-.++. +||+++. |= =+..+..++-..+.+.+++.++. ..||+..+ +..+-.| +...-.+-..|+
T Consensus 28 ~~li~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~g-r~pviaGv---------g~~~t~~ai~la~~a~~~Ga 96 (289)
T 2yxg_A 28 NFLIENGVSGIVAV-GTTGESPTLSHEEHKKVIEKVVDVVNG-RVQVIAGA---------GSNCTEEAIELSVFAEDVGA 96 (289)
T ss_dssp HHHHHTTCSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTT-SSEEEEEC---------CCSSHHHHHHHHHHHHHHTC
T ss_pred HHHHHCCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEeC---------CCCCHHHHHHHHHHHHhcCC
Confidence 334444 8999885 21 11222223444444555554432 47888743 4444455 555556667799
Q ss_pred cEEeecccccCCCCHHHHHHHHHHHHHHHh
Q 010211 401 DAVMLSGETAHGKFPLKAVKVMHTVALRTE 430 (515)
Q Consensus 401 D~vmLs~ETa~G~yPveaV~~m~~I~~~aE 430 (515)
|++|+..=--...-+-+.++....|+..+.
T Consensus 97 davlv~~P~y~~~s~~~l~~~f~~ia~a~~ 126 (289)
T 2yxg_A 97 DAVLSITPYYNKPTQEGLRKHFGKVAESIN 126 (289)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHHHCS
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999986322222334667788888887664
No 274
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=44.67 E-value=21 Score=38.94 Aligned_cols=51 Identities=24% Similarity=0.381 Sum_probs=41.8
Q ss_pred CCeEEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHH
Q 010211 99 RKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKE 149 (515)
Q Consensus 99 r~TKIi~TiGPss~~~e~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~ 149 (515)
.+-.+=+.+|-.-++.|-+..|+++|+|+.=|..+||..+...++++.||+
T Consensus 268 grL~VgAAVgv~~d~~eR~~aLv~AGvD~iviD~ahGhs~~v~~~i~~ik~ 318 (556)
T 4af0_A 268 KQLYCGAAIGTRPGDKDRLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQ 318 (556)
T ss_dssp CCBCCEEEECSSHHHHHHHHHHHHTTCCEEEECCSCCCSHHHHHHHHHHHH
T ss_pred hceeeEEEeccCccHHHHHHHHHhcCCcEEEEeccccccHHHHHHHHHHHh
Confidence 344566777766677899999999999999999999998887777777775
No 275
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=44.66 E-value=2.7e+02 Score=28.38 Aligned_cols=110 Identities=16% Similarity=0.199 Sum_probs=71.2
Q ss_pred HHhhcchhcCCcEEEeccc--C---------CHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhhcCeeEEcCC
Q 010211 271 EDIKFGVDNQVDFYAVSFV--K---------DAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARG 339 (515)
Q Consensus 271 ~dI~~al~~gvD~ValSfV--r---------sa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDgImIgrg 339 (515)
+.++.+.+.|+|.+-.-+- | ..+.+..++++.++. .+.+++-+-.++.++-+.+ .+|.+-||-+
T Consensus 124 ~~a~~~k~aGa~~vr~q~fKprTs~~~f~glg~egl~~l~~~~~e~--Gl~~~te~~d~~~~~~l~~---~vd~lkIgAr 198 (350)
T 1vr6_A 124 ETAHFLSELGVKVLRGGAYKPRTSPYSFQGLGEKGLEYLREAADKY--GMYVVTEALGEDDLPKVAE---YADIIQIGAR 198 (350)
T ss_dssp HHHHHHHHTTCCEEECBSCCCCCSTTSCCCCTHHHHHHHHHHHHHH--TCEEEEECSSGGGHHHHHH---HCSEEEECGG
T ss_pred HHHHHHHHcCCCeeeeeEEeCCCChHhhcCCCHHHHHHHHHHHHHc--CCcEEEEeCCHHHHHHHHH---hCCEEEECcc
Confidence 4445556778887643211 1 146677788887665 4778888877777755554 4899999966
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCC-cChHHHhHHHHHHH-hCCcEEee
Q 010211 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPT-PTRAEVSDIAIAVR-EGADAVML 405 (515)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~-PtrAEv~DvanaV~-~G~D~vmL 405 (515)
++- . ..+++++-+.||||++. ++. .|-.|+...++++. .|.+-++|
T Consensus 199 ~~~------n-----~~LL~~va~~~kPVilk---------~G~~~tl~ei~~Ave~i~~~GN~~viL 246 (350)
T 1vr6_A 199 NAQ------N-----FRLLSKAGSYNKPVLLK---------RGFMNTIEEFLLSAEYIANSGNTKIIL 246 (350)
T ss_dssp GTT------C-----HHHHHHHHTTCSCEEEE---------CCTTCCHHHHHHHHHHHHHTTCCCEEE
T ss_pred ccc------C-----HHHHHHHHccCCcEEEc---------CCCCCCHHHHHHHHHHHHHCCCCeEEE
Confidence 552 2 22344555789999994 455 48888888888765 46544444
No 276
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=44.61 E-value=1.3e+02 Score=29.48 Aligned_cols=96 Identities=17% Similarity=0.045 Sum_probs=56.7
Q ss_pred HHHHHh-h-cCeeEEcCCcc--cccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHH-HhHHHHHHHh
Q 010211 324 LHSIIS-A-SDGAMVARGDL--GAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVRE 398 (515)
Q Consensus 324 ldeIl~-~-sDgImIgrgDL--g~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAE-v~DvanaV~~ 398 (515)
++-.++ . +||+++. |=- +..+..++-..+.+.+++.++. ..||+..| +..+-.| +...-.+-..
T Consensus 30 v~~li~~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~g-rvpviaGv---------g~~~t~~ai~la~~a~~~ 98 (293)
T 1f6k_A 30 IRHNIDKMKVDGLYVG-GSTGENFMLSTEEKKEIFRIAKDEAKD-QIALIAQV---------GSVNLKEAVELGKYATEL 98 (293)
T ss_dssp HHHHHHTSCCSEEEES-SGGGTGGGSCHHHHHHHHHHHHHHHTT-SSEEEEEC---------CCSCHHHHHHHHHHHHHH
T ss_pred HHHHHhhCCCcEEEeC-ccccchhhCCHHHHHHHHHHHHHHhCC-CCeEEEec---------CCCCHHHHHHHHHHHHhc
Confidence 455566 4 8999885 211 1222334444555555555432 47888743 4444445 5555566677
Q ss_pred CCcEEeecccccCCCCHHHHHHHHHHHHHHHh
Q 010211 399 GADAVMLSGETAHGKFPLKAVKVMHTVALRTE 430 (515)
Q Consensus 399 G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE 430 (515)
|+|++|+..=--...-+-+.++....|+..+.
T Consensus 99 Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~ 130 (293)
T 1f6k_A 99 GYDCLSAVTPFYYKFSFPEIKHYYDTIIAETG 130 (293)
T ss_dssp TCSEEEEECCCSSCCCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEECCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 99999986332223335677888888887765
No 277
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=44.51 E-value=1.1e+02 Score=31.02 Aligned_cols=96 Identities=19% Similarity=0.205 Sum_probs=54.5
Q ss_pred HHHHhh-cCeeEEc-CCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHH-HhHHHHHHHhCCc
Q 010211 325 HSIISA-SDGAMVA-RGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGAD 401 (515)
Q Consensus 325 deIl~~-sDgImIg-rgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAE-v~DvanaV~~G~D 401 (515)
+-.++. +|||++. ---=+..+..++-..+.+.+++.++. ..||+..| +..+-.| +...-.+-..|+|
T Consensus 59 ~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~g-rvpViaGv---------g~~st~eai~la~~A~~~Gad 128 (343)
T 2v9d_A 59 DDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDR-RVPVLIGT---------GGTNARETIELSQHAQQAGAD 128 (343)
T ss_dssp HHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-SSCEEEEC---------CSSCHHHHHHHHHHHHHHTCS
T ss_pred HHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEec---------CCCCHHHHHHHHHHHHhcCCC
Confidence 334444 8999885 11111222334444555555555432 47888743 4455555 4455556677999
Q ss_pred EEeecccccCCCCHHHHHHHHHHHHHHHh
Q 010211 402 AVMLSGETAHGKFPLKAVKVMHTVALRTE 430 (515)
Q Consensus 402 ~vmLs~ETa~G~yPveaV~~m~~I~~~aE 430 (515)
++|+..=--...-+-+.++....|+..++
T Consensus 129 avlv~~P~Y~~~s~~~l~~~f~~VA~a~~ 157 (343)
T 2v9d_A 129 GIVVINPYYWKVSEANLIRYFEQVADSVT 157 (343)
T ss_dssp EEEEECCSSSCCCHHHHHHHHHHHHHTCS
T ss_pred EEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 99986322222335667888888876554
No 278
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=44.48 E-value=32 Score=32.09 Aligned_cols=63 Identities=13% Similarity=0.175 Sum_probs=38.4
Q ss_pred hhcchhcCCcEEEec-----ccCCHHHHHHHHHHHHhcCCCceEEE--EecChhhhhcHHHHHhh-cCeeEEcCCcc
Q 010211 273 IKFGVDNQVDFYAVS-----FVKDAKVVHELKDYLKSCNADIHVIV--KIESADSIPNLHSIISA-SDGAMVARGDL 341 (515)
Q Consensus 273 I~~al~~gvD~ValS-----fVrsa~dv~~vr~~l~~~~~~i~IIa--KIEt~~aveNldeIl~~-sDgImIgrgDL 341 (515)
.+...+.|+|++-+. |...... ..+++.-+.. ++++++ .|.+++ .+++.++. +|+|++|+..|
T Consensus 37 a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~~--~ipv~v~ggi~~~~---~~~~~l~~Gad~V~lg~~~l 107 (244)
T 2y88_A 37 ALGWQRDGAEWIHLVDLDAAFGRGSNH-ELLAEVVGKL--DVQVELSGGIRDDE---SLAAALATGCARVNVGTAAL 107 (244)
T ss_dssp HHHHHHTTCSEEEEEEHHHHTTSCCCH-HHHHHHHHHC--SSEEEEESSCCSHH---HHHHHHHTTCSEEEECHHHH
T ss_pred HHHHHHcCCCEEEEEcCcccccCCChH-HHHHHHHHhc--CCcEEEECCCCCHH---HHHHHHHcCCCEEEECchHh
Confidence 345567899998773 4444433 3344433322 456665 466654 36666666 89999997765
No 279
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=44.32 E-value=48 Score=33.18 Aligned_cols=56 Identities=14% Similarity=0.004 Sum_probs=39.1
Q ss_pred CceEEEEecChhhhhcHHHHHhh--cCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEE
Q 010211 308 DIHVIVKIESADSIPNLHSIISA--SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (515)
Q Consensus 308 ~i~IIaKIEt~~aveNldeIl~~--sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivA 371 (515)
.+.|+ -=|+....+.+.++++. +|+|++.++-+|- + .--.++++.|+++|.++.+.
T Consensus 240 ~iPI~-~de~~~~~~~~~~~i~~~~~d~v~ik~~~~GG------i-~~~~~i~~~A~~~g~~~~~~ 297 (359)
T 1mdl_A 240 NVPVQ-MGENWLGPEEMFKALSIGACRLAMPDAMKIGG------V-TGWIRASALAQQFGIPMSSH 297 (359)
T ss_dssp SSCEE-ECTTCCSHHHHHHHHHTTCCSEECCBTTTTTH------H-HHHHHHHHHHHHTTCCBCCB
T ss_pred CCCEE-eCCCCCCHHHHHHHHHcCCCCEEeecchhhCC------H-HHHHHHHHHHHHcCCeEeec
Confidence 45554 56777677777888776 8999987655432 2 23356888999999998873
No 280
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=44.32 E-value=91 Score=30.84 Aligned_cols=96 Identities=16% Similarity=0.101 Sum_probs=53.8
Q ss_pred HHHHhh-cCeeEEc-CCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHH-HhHHHHHHHhCCc
Q 010211 325 HSIISA-SDGAMVA-RGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGAD 401 (515)
Q Consensus 325 deIl~~-sDgImIg-rgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAE-v~DvanaV~~G~D 401 (515)
+-.++. +|||++. ---=+..+..++-..+.+.+++.++ -..||+..+ +..+-.| +...-.+-..|+|
T Consensus 43 ~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~-grvpviaGv---------g~~~t~~ai~la~~a~~~Gad 112 (304)
T 3l21_A 43 NHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVG-DRARVIAGA---------GTYDTAHSIRLAKACAAEGAH 112 (304)
T ss_dssp HHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-TTSEEEEEC---------CCSCHHHHHHHHHHHHHHTCS
T ss_pred HHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhC-CCCeEEEeC---------CCCCHHHHHHHHHHHHHcCCC
Confidence 333334 8999985 1111122222444444455555443 246888743 4444555 5555666778999
Q ss_pred EEeecccccCCCCHHHHHHHHHHHHHHHh
Q 010211 402 AVMLSGETAHGKFPLKAVKVMHTVALRTE 430 (515)
Q Consensus 402 ~vmLs~ETa~G~yPveaV~~m~~I~~~aE 430 (515)
++|+..=--...-+-+.++....|+..++
T Consensus 113 avlv~~P~y~~~s~~~l~~~f~~va~a~~ 141 (304)
T 3l21_A 113 GLLVVTPYYSKPPQRGLQAHFTAVADATE 141 (304)
T ss_dssp EEEEECCCSSCCCHHHHHHHHHHHHTSCS
T ss_pred EEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 99986322222235677888888876663
No 281
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=44.29 E-value=1.4e+02 Score=29.03 Aligned_cols=95 Identities=20% Similarity=0.226 Sum_probs=55.5
Q ss_pred HHHHhh-cCeeEEcCCcc--cccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHH-HhHHHHHHHhCC
Q 010211 325 HSIISA-SDGAMVARGDL--GAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGA 400 (515)
Q Consensus 325 deIl~~-sDgImIgrgDL--g~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAE-v~DvanaV~~G~ 400 (515)
+-.++. +||+++. |=- +..+..++-..+.+..++.++. ..||+..+ +..+-.| +...-.+-..|+
T Consensus 29 ~~li~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~g-r~pviaGv---------g~~~t~~ai~la~~a~~~Ga 97 (291)
T 3tak_A 29 EWHIEQGTNSIVAV-GTTGEASTLSMEEHTQVIKEIIRVANK-RIPIIAGT---------GANSTREAIELTKAAKDLGA 97 (291)
T ss_dssp HHHHHHTCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTT-SSCEEEEC---------CCSSHHHHHHHHHHHHHHTC
T ss_pred HHHHHCCCCEEEEC-ccccccccCCHHHHHHHHHHHHHHhCC-CCeEEEeC---------CCCCHHHHHHHHHHHHhcCC
Confidence 333444 8999875 211 1222234444455555555542 37888743 4444455 555566777899
Q ss_pred cEEeecccccCCCCHHHHHHHHHHHHHHHh
Q 010211 401 DAVMLSGETAHGKFPLKAVKVMHTVALRTE 430 (515)
Q Consensus 401 D~vmLs~ETa~G~yPveaV~~m~~I~~~aE 430 (515)
|++|+..=--...-+-+.++....|+..+.
T Consensus 98 davlv~~P~y~~~~~~~l~~~f~~ia~a~~ 127 (291)
T 3tak_A 98 DAALLVTPYYNKPTQEGLYQHYKAIAEAVE 127 (291)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHHHCC
T ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999986322222335677888888888774
No 282
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=43.99 E-value=2.2e+02 Score=27.65 Aligned_cols=96 Identities=9% Similarity=-0.038 Sum_probs=56.2
Q ss_pred HHhhcchhcCCcEEEec------ccCCHHHHHHHHHHHHhcCCCceEEEEec---ChhhhhcHHHHHhh-cCeeEEcCCc
Q 010211 271 EDIKFGVDNQVDFYAVS------FVKDAKVVHELKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARGD 340 (515)
Q Consensus 271 ~dI~~al~~gvD~ValS------fVrsa~dv~~vr~~l~~~~~~i~IIaKIE---t~~aveNldeIl~~-sDgImIgrgD 340 (515)
+.++|-++.|+|++.+. +.-+.++-.++-+...+.... ||+-+= |.++++.....-+. +|++|+-+-.
T Consensus 24 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g--ViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~ 101 (288)
T 2nuw_A 24 THAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHK--LIFQVGSLNLNDVMELVKFSNEMDILGVSSHSPY 101 (288)
T ss_dssp HHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSC--EEEECCCSCHHHHHHHHHHHHTSCCSEEEECCCC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--eEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcCCc
Confidence 45577788999998762 333444444443433333223 888773 46677666665555 8999997554
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcCCcEEEE
Q 010211 341 LGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (515)
Q Consensus 341 Lg~elg~e~v~~aqk~Ii~~c~~aGKPvivA 371 (515)
..-. +.-..+.+..-+.|.+.+.|+++.
T Consensus 102 y~~~---~s~~~l~~~f~~va~a~~lPiilY 129 (288)
T 2nuw_A 102 YFPR---LPEKFLAKYYEEIARISSHSLYIY 129 (288)
T ss_dssp SSCS---CCHHHHHHHHHHHHHHCCSCEEEE
T ss_pred CCCC---CCHHHHHHHHHHHHHhcCCCEEEE
Confidence 3220 122333344444466678999985
No 283
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=43.93 E-value=98 Score=30.84 Aligned_cols=120 Identities=16% Similarity=0.181 Sum_probs=75.8
Q ss_pred CCCceEEEEecChhhhhcHHHHHhh-cCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccc---cccccC
Q 010211 306 NADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNML---ESMIDH 381 (515)
Q Consensus 306 ~~~i~IIaKIEt~~aveNldeIl~~-sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmL---eSMi~~ 381 (515)
+..++|..........+.+.+-+.. .+-+|+.- | ++++++=...-+++++.|++.|..|=.==-.+ |.-+..
T Consensus 78 ~~~VPValHlDHg~~~e~i~~ai~~GFtSVMiDg---S-~~p~eeNi~~Tk~vv~~ah~~gvsVEaElG~vgG~Ed~~~~ 153 (288)
T 3q94_A 78 NITVPVAIHLDHGSSFEKCKEAIDAGFTSVMIDA---S-HHPFEENVETTKKVVEYAHARNVSVEAELGTVGGQEDDVIA 153 (288)
T ss_dssp TCCSCEEEEEEEECSHHHHHHHHHHTCSEEEECC---T-TSCHHHHHHHHHHHHHHHHTTTCEEEEEESBCBCSCSSCGG
T ss_pred CCCCcEEEECCCCCCHHHHHHHHHcCCCeEEEeC---C-CCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCcCC
Confidence 5678999999888766555444444 78999953 3 35777877888999999999999873210001 100000
Q ss_pred CCcChHHHhHHHHHH-HhCCcEEeecccccCCCCHHH---HHHHHHHHHHHH
Q 010211 382 PTPTRAEVSDIAIAV-REGADAVMLSGETAHGKFPLK---AVKVMHTVALRT 429 (515)
Q Consensus 382 ~~PtrAEv~DvanaV-~~G~D~vmLs~ETa~G~yPve---aV~~m~~I~~~a 429 (515)
..-....-.+...++ .-|+|++-.+--|+.|.||-+ -...|.+|-...
T Consensus 154 ~~~~yT~Peea~~Fv~~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~v 205 (288)
T 3q94_A 154 EGVIYADPAECKHLVEATGIDCLAPALGSVHGPYKGEPNLGFAEMEQVRDFT 205 (288)
T ss_dssp GGCBCCCHHHHHHHHHHHCCSEEEECSSCBSSCCSSSCCCCHHHHHHHHHHH
T ss_pred ccccCCCHHHHHHHHHHHCCCEEEEEcCcccCCcCCCCccCHHHHHHHHHhc
Confidence 000001123445666 479999999999999999732 344555555554
No 284
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=43.76 E-value=1.4e+02 Score=29.50 Aligned_cols=95 Identities=15% Similarity=0.110 Sum_probs=54.0
Q ss_pred HHHHhh-cCeeEEcCCc--ccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHH-HhHHHHHHHhCC
Q 010211 325 HSIISA-SDGAMVARGD--LGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGA 400 (515)
Q Consensus 325 deIl~~-sDgImIgrgD--Lg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAE-v~DvanaV~~G~ 400 (515)
+-.++. +|||++. |= =+..+..++-..+.+.+++.++ -..||+..+ +..+-.| +...-.+-..|+
T Consensus 44 ~~li~~Gv~gl~v~-GttGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaGv---------g~~st~~ai~la~~A~~~Ga 112 (304)
T 3cpr_A 44 AYLVDKGLDSLVLA-GTTGESPTTTAAEKLELLKAVREEVG-DRAKLIAGV---------GTNNTRTSVELAEAAASAGA 112 (304)
T ss_dssp HHHHHTTCCEEEES-STTTTTTTSCHHHHHHHHHHHHHHHT-TTSEEEEEC---------CCSCHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEecC---------CCCCHHHHHHHHHHHHhcCC
Confidence 334444 8999885 21 1112222444444555555443 247888743 4444455 555556677799
Q ss_pred cEEeecccccCCCCHHHHHHHHHHHHHHHh
Q 010211 401 DAVMLSGETAHGKFPLKAVKVMHTVALRTE 430 (515)
Q Consensus 401 D~vmLs~ETa~G~yPveaV~~m~~I~~~aE 430 (515)
|++|+..=--...-+-+.++....|+..+.
T Consensus 113 davlv~~P~y~~~~~~~l~~~f~~ia~a~~ 142 (304)
T 3cpr_A 113 DGLLVVTPYYSKPSQEGLLAHFGAIAAATE 142 (304)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHHHCC
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999986332222234667788888877664
No 285
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=43.75 E-value=1.2e+02 Score=29.79 Aligned_cols=95 Identities=20% Similarity=0.212 Sum_probs=53.5
Q ss_pred HHHHhh-cCeeEEcCCc--ccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHH-HhHHHHHHHhCC
Q 010211 325 HSIISA-SDGAMVARGD--LGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGA 400 (515)
Q Consensus 325 deIl~~-sDgImIgrgD--Lg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAE-v~DvanaV~~G~ 400 (515)
+-.++. +|||++. |= =+..+..++-..+.+.+++.++. ..||+..+ +..+-.| +...-.+-..|+
T Consensus 40 ~~li~~Gv~gl~v~-GtTGE~~~Ls~eEr~~v~~~~~~~~~g-rvpViaGv---------g~~~t~~ai~la~~A~~~Ga 108 (301)
T 1xky_A 40 NYLIDNGTTAIVVG-GTTGESPTLTSEEKVALYRHVVSVVDK-RVPVIAGT---------GSNNTHASIDLTKKATEVGV 108 (301)
T ss_dssp HHHHHTTCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTT-SSCEEEEC---------CCSCHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCC-CceEEeCC---------CCCCHHHHHHHHHHHHhcCC
Confidence 334444 8999885 21 11222224444455555555432 47888743 4444445 555556667799
Q ss_pred cEEeecccccCCCCHHHHHHHHHHHHHHHh
Q 010211 401 DAVMLSGETAHGKFPLKAVKVMHTVALRTE 430 (515)
Q Consensus 401 D~vmLs~ETa~G~yPveaV~~m~~I~~~aE 430 (515)
|++|+..=--...-+-+.++....|+..+.
T Consensus 109 davlv~~P~y~~~s~~~l~~~f~~va~a~~ 138 (301)
T 1xky_A 109 DAVMLVAPYYNKPSQEGMYQHFKAIAESTP 138 (301)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHHTCS
T ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999986332223334667778888876553
No 286
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A
Probab=43.73 E-value=30 Score=33.68 Aligned_cols=52 Identities=15% Similarity=0.114 Sum_probs=33.7
Q ss_pred CHHHHHHHHHhCCcEEEEecCCC---------Ch-HHHHHHHHHHHHHHhhcCCceEEEEEecCC
Q 010211 113 SREMIWKLAEEGMNVARLNMSHG---------DH-ASHQKTIDLVKEYNSQFEDKAVAIMLDTKG 167 (515)
Q Consensus 113 ~~e~i~~li~aGm~v~RiN~SHg---------~~-e~~~~~i~~ir~~~~~~~~~~i~I~lDL~G 167 (515)
+.+.++.|-+.|+|++||-++.. .. +...+.++.+=+...+.| +.+++|+-.
T Consensus 33 ~~~di~~~~~~G~n~vRi~i~w~~~~~~~~~~~~~~~~l~~~~~~v~~~~~~g---i~vild~h~ 94 (305)
T 1h1n_A 33 DPNTIDTLISKGMNIFRVPFMMERLVPNSMTGSPDPNYLADLIATVNAITQKG---AYAVVDPHN 94 (305)
T ss_dssp CHHHHHHHHHTTCCEEEEEECHHHHSCSSTTSCCCHHHHHHHHHHHHHHHHTT---CEEEEEECC
T ss_pred CHHHHHHHHHCCCCEEEecccHHHcCCCCCCCCcCHHHHHHHHHHHHHHHHCC---CEEEEeccc
Confidence 47899999999999999988531 11 223333343334444455 778888755
No 287
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=43.31 E-value=2.1e+02 Score=28.98 Aligned_cols=129 Identities=9% Similarity=0.025 Sum_probs=64.9
Q ss_pred HhhHHHh-hcchhcCCc-EEEeccc-----------CCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh--c
Q 010211 267 DKDWEDI-KFGVDNQVD-FYAVSFV-----------KDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA--S 331 (515)
Q Consensus 267 ekD~~dI-~~al~~gvD-~ValSfV-----------rsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~--s 331 (515)
.+|+... +...+.|+| +|-+.+- .+++.+.++-+.+.+. -++.|++||=--.....+.++++. .
T Consensus 140 ~~d~~~~a~~l~~~g~~d~ielNisCPn~~G~~~l~~~~e~l~~il~av~~~-~~~PV~vKi~p~~~~~~~a~~~~~aga 218 (345)
T 3oix_A 140 PEETHTILXMVEASKYQGLVELNLSCPNVPGXPQIAYDFETTDQILSEVFTY-FTKPLGIKLPPYFDIVHFDQAAAIFNX 218 (345)
T ss_dssp HHHHHHHHHHHHHSSCCSEEEEECSCCCSTTCCCGGGCHHHHHHHHHHHTTT-CCSCEEEEECCCCCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhccCCCcEEEEecCCCCcCCchhhcCCHHHHHHHHHHHHHH-hCCCeEEEECCCCCHHHHHHHHHHhCC
Confidence 4555333 333345666 7776543 3344443333333332 257899999543333344444443 4
Q ss_pred CeeE-------------EcCCcc----cccC----CCCCHHHHHHHHHHHHHhc--CCcEEEEeccccccccCCCcChHH
Q 010211 332 DGAM-------------VARGDL----GAEL----PIEDVPLLQEDIIRRCRSM--QKPVIVATNMLESMIDHPTPTRAE 388 (515)
Q Consensus 332 DgIm-------------IgrgDL----g~el----g~e~v~~aqk~Ii~~c~~a--GKPvivATqmLeSMi~~~~PtrAE 388 (515)
|+|- |.+.-. .... |.+.-+.+.+.+-+..++. ..|+|.. .+.-+
T Consensus 219 ~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i~~~~~~~ipIIg~---------GGI~s--- 286 (345)
T 3oix_A 219 YPLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAFYKRLNPSIQIIGT---------GGVXT--- 286 (345)
T ss_dssp SCCSEEEECCCEEEEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHHHTTSCTTSEEEEE---------SSCCS---
T ss_pred CceEEEEeecccccceeeccCccccccccccCCcCCccccHHHHHHHHHHHHHcCCCCcEEEE---------CCCCC---
Confidence 5441 211111 0111 1123344444444444454 4788763 34433
Q ss_pred HhHHHHHHHhCCcEEeeccc
Q 010211 389 VSDIAIAVREGADAVMLSGE 408 (515)
Q Consensus 389 v~DvanaV~~G~D~vmLs~E 408 (515)
..|+..++..|+|+||+...
T Consensus 287 ~~da~~~l~aGAd~V~igra 306 (345)
T 3oix_A 287 GRDAFEHILCGASMVQIGTA 306 (345)
T ss_dssp HHHHHHHHHHTCSEEEESHH
T ss_pred hHHHHHHHHhCCCEEEEChH
Confidence 34677888999999999744
No 288
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=42.99 E-value=1.3e+02 Score=27.77 Aligned_cols=132 Identities=14% Similarity=0.046 Sum_probs=68.5
Q ss_pred HHHhhcchhcCCcEEEecccC----CHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh-cCeeEEcCCccccc
Q 010211 270 WEDIKFGVDNQVDFYAVSFVK----DAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAE 344 (515)
Q Consensus 270 ~~dI~~al~~gvD~ValSfVr----sa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDgImIgrgDLg~e 344 (515)
.+.++. ++.|+|++=+.|+- -.+.++++|+.. .+..+.+-.|+-.. +-.-+++..+. +|++.+- ++
T Consensus 22 ~~~~~~-~~~~vd~ie~g~~~~~~~G~~~i~~lr~~~--~~~~i~ld~~l~d~-p~~~~~~~~~aGad~i~vh--~~--- 92 (218)
T 3jr2_A 22 VAVASN-VASYVDVIEVGTILAFAEGMKAVSTLRHNH--PNHILVCDMKTTDG-GAILSRMAFEAGADWITVS--AA--- 92 (218)
T ss_dssp HHHHHH-HGGGCSEEEECHHHHHHHTTHHHHHHHHHC--TTSEEEEEEEECSC-HHHHHHHHHHHTCSEEEEE--TT---
T ss_pred HHHHHH-hcCCceEEEeCcHHHHhcCHHHHHHHHHhC--CCCcEEEEEeeccc-HHHHHHHHHhcCCCEEEEe--cC---
Confidence 344444 46689988666542 233344444331 12234444455321 11224555555 8988773 11
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCcEEE-EeccccccccCCCcChHHHhHHHHHHHhCCcEEee-ccccc--CC-CCHHHHH
Q 010211 345 LPIEDVPLLQEDIIRRCRSMQKPVIV-ATNMLESMIDHPTPTRAEVSDIAIAVREGADAVML-SGETA--HG-KFPLKAV 419 (515)
Q Consensus 345 lg~e~v~~aqk~Ii~~c~~aGKPviv-ATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmL-s~ETa--~G-~yPveaV 419 (515)
+ -....++.++.++++|+.+++ . -++ +|-.+ ...+...|+|.+.+ .+-++ .| .+..+.+
T Consensus 93 -~---~~~~~~~~~~~~~~~g~~~~~d~--------l~~-~T~~~---~~~~~~~g~d~v~~~~~~~~~~~g~~~~~~~l 156 (218)
T 3jr2_A 93 -A---HIATIAACKKVADELNGEIQIEI--------YGN-WTMQD---AKAWVDLGITQAIYHRSRDAELAGIGWTTDDL 156 (218)
T ss_dssp -S---CHHHHHHHHHHHHHHTCEEEEEC--------CSS-CCHHH---HHHHHHTTCCEEEEECCHHHHHHTCCSCHHHH
T ss_pred -C---CHHHHHHHHHHHHHhCCccceee--------eec-CCHHH---HHHHHHcCccceeeeeccccccCCCcCCHHHH
Confidence 1 124567888899999998774 1 222 34323 33445559997654 33222 13 3445666
Q ss_pred HHHHHHH
Q 010211 420 KVMHTVA 426 (515)
Q Consensus 420 ~~m~~I~ 426 (515)
+.+++++
T Consensus 157 ~~i~~~~ 163 (218)
T 3jr2_A 157 DKMRQLS 163 (218)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 6666665
No 289
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=42.96 E-value=67 Score=31.41 Aligned_cols=117 Identities=15% Similarity=0.153 Sum_probs=60.8
Q ss_pred HhhcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhhcCeeEEcCCcccccCCC-CCH
Q 010211 272 DIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPI-EDV 350 (515)
Q Consensus 272 dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDgImIgrgDLg~elg~-e~v 350 (515)
.++.+.+.|+|++.++=+. .+++.++.+.+++.+-+ .+.-+--....+.+++|.+.+.|....-.=.|+ .|. ..+
T Consensus 111 f~~~~~~aG~dGviv~Dl~-~ee~~~~~~~~~~~gl~--~i~liap~s~~eri~~ia~~~~gfiy~vs~~G~-TG~~~~~ 186 (271)
T 1ujp_A 111 FFGLFKQAGATGVILPDLP-PDEDPGLVRLAQEIGLE--TVFLLAPTSTDARIATVVRHATGFVYAVSVTGV-TGMRERL 186 (271)
T ss_dssp HHHHHHHHTCCEEECTTCC-GGGCHHHHHHHHHHTCE--EECEECTTCCHHHHHHHHTTCCSCEEEECC-----------
T ss_pred HHHHHHHcCCCEEEecCCC-HHHHHHHHHHHHHcCCc--eEEEeCCCCCHHHHHHHHHhCCCCEEEEecCcc-cCCCCCC
Confidence 3445567799988877543 25566677777766543 222332223456788998886654322110101 122 111
Q ss_pred HHHHHHHHHHHHhc-CCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeec
Q 010211 351 PLLQEDIIRRCRSM-QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (515)
Q Consensus 351 ~~aqk~Ii~~c~~a-GKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs 406 (515)
..-..+.++..+++ +.|+++.. +.-|...+ .. + .|+|+++.-
T Consensus 187 ~~~~~~~v~~vr~~~~~Pv~vGf---------GI~t~e~a---~~-~-~~ADgVIVG 229 (271)
T 1ujp_A 187 PEEVKDLVRRIKARTALPVAVGF---------GVSGKATA---AQ-A-AVADGVVVG 229 (271)
T ss_dssp --CCHHHHHHHHTTCCSCEEEES---------CCCSHHHH---HH-H-TTSSEEEEC
T ss_pred CccHHHHHHHHHhhcCCCEEEEc---------CCCCHHHH---HH-h-cCCCEEEEC
Confidence 21223344444444 78998843 44343332 24 3 899999973
No 290
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=42.93 E-value=3.1e+02 Score=29.60 Aligned_cols=150 Identities=12% Similarity=-0.020 Sum_probs=89.4
Q ss_pred CCCHhhHHHh-hcchhcCCcEEEecc----cC-----CHHHHHHHHHHHHhcCCCceEEEEec--Chhhhh---------
Q 010211 264 SITDKDWEDI-KFGVDNQVDFYAVSF----VK-----DAKVVHELKDYLKSCNADIHVIVKIE--SADSIP--------- 322 (515)
Q Consensus 264 ~ltekD~~dI-~~al~~gvD~ValSf----Vr-----sa~dv~~vr~~l~~~~~~i~IIaKIE--t~~ave--------- 322 (515)
.++..|+..| +.-.+.|++.|=+.| .. +..+...++.+.+. ..++.+.+-+= +.-|..
T Consensus 43 ~~~tedKl~Ia~~L~~~Gv~~IE~G~patF~~~~rfl~~d~~e~lr~l~~~-~~~~~l~~L~R~~N~~G~~~ypddv~~~ 121 (539)
T 1rqb_A 43 RMAMEDMVGACADIDAAGYWSVECWGGATYDSCIRFLNEDPWERLRTFRKL-MPNSRLQMLLRGQNLLGYRHYNDEVVDR 121 (539)
T ss_dssp CCCGGGTGGGHHHHHHTTCSEEEEEETTHHHHHHHTSCCCHHHHHHHHHHH-CTTSCEEEEECGGGTTSSSCCCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEeCcccccccchhccCCCHHHHHHHHHHh-CCCCEEEEEeccccccCcccCcccccHH
Confidence 4566776555 334467999887753 11 45565556554433 24555555441 222332
Q ss_pred cHHHHHhh-cCeeEE--cCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHH-HHHh
Q 010211 323 NLHSIISA-SDGAMV--ARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAI-AVRE 398 (515)
Q Consensus 323 NldeIl~~-sDgImI--grgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~Dvan-aV~~ 398 (515)
+++..++. .|.|-| +-.|+ ...+..++.++++|+.|-.+= |+...+.-+...+.+++. +...
T Consensus 122 ~ve~a~~aGvd~vrIf~s~sd~----------~ni~~~i~~ak~~G~~v~~~i----~~~~~~~~~~e~~~~~a~~l~~~ 187 (539)
T 1rqb_A 122 FVDKSAENGMDVFRVFDAMNDP----------RNMAHAMAAVKKAGKHAQGTI----CYTISPVHTVEGYVKLAGQLLDM 187 (539)
T ss_dssp HHHHHHHTTCCEEEECCTTCCT----------HHHHHHHHHHHHTTCEEEEEE----ECCCSTTCCHHHHHHHHHHHHHT
T ss_pred HHHHHHhCCCCEEEEEEehhHH----------HHHHHHHHHHHHCCCeEEEEE----EeeeCCCCCHHHHHHHHHHHHHc
Confidence 23444444 565444 33333 345788999999999873211 222333334444555544 5667
Q ss_pred CCcEEeecccccCCCCHHHHHHHHHHHHHHH
Q 010211 399 GADAVMLSGETAHGKFPLKAVKVMHTVALRT 429 (515)
Q Consensus 399 G~D~vmLs~ETa~G~yPveaV~~m~~I~~~a 429 (515)
|+|.+-|. +|+=+-.|-++-+.+..+..+.
T Consensus 188 Gad~I~L~-DT~G~~~P~~v~~lv~~l~~~~ 217 (539)
T 1rqb_A 188 GADSIALK-DMAALLKPQPAYDIIKAIKDTY 217 (539)
T ss_dssp TCSEEEEE-ETTCCCCHHHHHHHHHHHHHHH
T ss_pred CCCEEEeC-CCCCCcCHHHHHHHHHHHHHhc
Confidence 99999885 8888888999988888888776
No 291
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=42.82 E-value=63 Score=32.48 Aligned_cols=70 Identities=27% Similarity=0.343 Sum_probs=48.2
Q ss_pred CCCeEEEEecC--CCCCC-----------HHHHHHHHHhCCcEEEEec-CC--CC-----hHHHHHHHHHHHHHHhhcCC
Q 010211 98 RRKTKIVCTIG--PSTSS-----------REMIWKLAEEGMNVARLNM-SH--GD-----HASHQKTIDLVKEYNSQFED 156 (515)
Q Consensus 98 ~r~TKIi~TiG--Pss~~-----------~e~i~~li~aGm~v~RiN~-SH--g~-----~e~~~~~i~~ir~~~~~~~~ 156 (515)
..+|+|++-+. |-|-+ .+..++|+++|.++.=||. |- |. .|++.+++..|+.+.++.+
T Consensus 7 ~~~~~iMGIlNvTPDSFsdgg~~~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPGa~~v~~~eE~~Rv~pvI~~l~~~~~- 85 (314)
T 2vef_A 7 HAKTVICGIINVTPDSFSDGGQFFALEQALQQARKLIAEGASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKESD- 85 (314)
T ss_dssp CCCCEEEEEEECCC---------CHHHHHHHHHHHHHHTTCSEEEEECCC-----CHHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred CCCceEEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhhCC-
Confidence 36788887663 32221 2356789999999999998 42 22 3889999999888877654
Q ss_pred ceEEEEEecCCCee
Q 010211 157 KAVAIMLDTKGPEV 170 (515)
Q Consensus 157 ~~i~I~lDL~GPkI 170 (515)
+.|.+|+.=|++
T Consensus 86 --vpiSIDT~~~~V 97 (314)
T 2vef_A 86 --VLISIDTWKSQV 97 (314)
T ss_dssp --CEEEEECSCHHH
T ss_pred --ceEEEeCCCHHH
Confidence 678889876654
No 292
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=42.57 E-value=1.4e+02 Score=28.37 Aligned_cols=38 Identities=13% Similarity=0.142 Sum_probs=24.0
Q ss_pred HHhhcchhcCCcEEEecccC------CHHHHHHHHHHHHhcCCC
Q 010211 271 EDIKFGVDNQVDFYAVSFVK------DAKVVHELKDYLKSCNAD 308 (515)
Q Consensus 271 ~dI~~al~~gvD~ValSfVr------sa~dv~~vr~~l~~~~~~ 308 (515)
+.++.+.+.|.|+|-+.+.. ...++.++++.+++.|-.
T Consensus 40 ~~l~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~ 83 (296)
T 2g0w_A 40 KRVKVAAENGFDGIGLRAENYVDALAAGLTDEDMLRILDEHNMK 83 (296)
T ss_dssp HHHHHHHHTTCSEEEEEHHHHHHHHHTTCCHHHHHHHHHHTTCE
T ss_pred HHHHHHHHcCCCEEEeCHHHHHHHHhcCCcHHHHHHHHHHcCCc
Confidence 45677888999999886421 223455566666655443
No 293
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=42.51 E-value=2.6e+02 Score=27.47 Aligned_cols=124 Identities=11% Similarity=0.109 Sum_probs=76.4
Q ss_pred HHhhcchhcCCcEEEeccc--C---------CHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhhcCeeEEcCC
Q 010211 271 EDIKFGVDNQVDFYAVSFV--K---------DAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARG 339 (515)
Q Consensus 271 ~dI~~al~~gvD~ValSfV--r---------sa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDgImIgrg 339 (515)
+-++.+.+.|+|.+-.-+- | ..+.+..++++.++.| +.+++-+-.++.++-+.+ .+|.+-||-+
T Consensus 56 ~~a~~~k~~ga~~~k~~~~kprts~~~f~g~g~~gl~~l~~~~~~~G--l~~~te~~d~~~~~~l~~---~vd~~kIgs~ 130 (276)
T 1vs1_A 56 EAALAVKEAGAHMLRGGAFKPRTSPYSFQGLGLEGLKLLRRAGDEAG--LPVVTEVLDPRHVETVSR---YADMLQIGAR 130 (276)
T ss_dssp HHHHHHHHHTCSEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHT--CCEEEECCCGGGHHHHHH---HCSEEEECGG
T ss_pred HHHHHHHHhCCCEEEeEEEeCCCChhhhcCCCHHHHHHHHHHHHHcC--CcEEEecCCHHHHHHHHH---hCCeEEECcc
Confidence 3345555678887633211 1 1456677788876654 678888877777765555 4899999966
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCC-cChHHHhHHHHHHHh-CC-cEEeec-ccccCCCCH
Q 010211 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPT-PTRAEVSDIAIAVRE-GA-DAVMLS-GETAHGKFP 415 (515)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~-PtrAEv~DvanaV~~-G~-D~vmLs-~ETa~G~yP 415 (515)
++- . ..+++++-+.||||++. ++. .|..|+...++++.. |. +.+++- +=+..-.||
T Consensus 131 ~~~------n-----~~ll~~~a~~~kPV~lk---------~G~~~t~~ei~~Ave~i~~~Gn~~i~L~~Rg~~~yp~y~ 190 (276)
T 1vs1_A 131 NMQ------N-----FPLLREVGRSGKPVLLK---------RGFGNTVEELLAAAEYILLEGNWQVVLVERGIRTFEPST 190 (276)
T ss_dssp GTT------C-----HHHHHHHHHHTCCEEEE---------CCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSS
T ss_pred ccc------C-----HHHHHHHHccCCeEEEc---------CCCCCCHHHHHHHHHHHHHcCCCeEEEEeCCcCCCCCcC
Confidence 652 2 23445555789999994 455 588888888887654 65 444443 332332455
Q ss_pred HHHH
Q 010211 416 LKAV 419 (515)
Q Consensus 416 veaV 419 (515)
.+.+
T Consensus 191 ~~~v 194 (276)
T 1vs1_A 191 RFTL 194 (276)
T ss_dssp SSBC
T ss_pred cchh
Confidence 4443
No 294
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=42.46 E-value=1.7e+02 Score=29.40 Aligned_cols=121 Identities=17% Similarity=0.224 Sum_probs=59.7
Q ss_pred HHhhcchhcCCcEEEecc----------------cCCHHHHHHHHHHHHhcCCCceEEEEecC----hhhhhcHHHHHh-
Q 010211 271 EDIKFGVDNQVDFYAVSF----------------VKDAKVVHELKDYLKSCNADIHVIVKIES----ADSIPNLHSIIS- 329 (515)
Q Consensus 271 ~dI~~al~~gvD~ValSf----------------Vrsa~dv~~vr~~l~~~~~~i~IIaKIEt----~~aveNldeIl~- 329 (515)
+..+.+.+.|+|+|-+.+ .++.+.+.++-+.+.+.- ++.|.+||-. ....++..++++
T Consensus 74 ~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v-~~PV~vKiR~g~~~~~~~~~~~~~a~~ 152 (350)
T 3b0p_A 74 EAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAV-RVPVTVKMRLGLEGKETYRGLAQSVEA 152 (350)
T ss_dssp HHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHC-SSCEEEEEESCBTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHh-CCceEEEEecCcCccccHHHHHHHHHH
Confidence 444566678999887754 233444444434443322 5778888741 111123333333
Q ss_pred ---h-cCeeEEcCCcc--cccCCCC--CHHHHHHHHHHHH-Hhc-CCcEEEEeccccccccCCCcChHHHhHHHHHHHhC
Q 010211 330 ---A-SDGAMVARGDL--GAELPIE--DVPLLQEDIIRRC-RSM-QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREG 399 (515)
Q Consensus 330 ---~-sDgImIgrgDL--g~elg~e--~v~~aqk~Ii~~c-~~a-GKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G 399 (515)
. +|+|.|-.+.- +.. |.. ..+...-..++.. +.. +.||+.. ...-+.. |+..++. |
T Consensus 153 l~~aG~d~I~V~~r~~~~g~~-g~~~~~~~~~~~~~i~~ik~~~~~iPVian---------GgI~s~e---da~~~l~-G 218 (350)
T 3b0p_A 153 MAEAGVKVFVVHARSALLALS-TKANREIPPLRHDWVHRLKGDFPQLTFVTN---------GGIRSLE---EALFHLK-R 218 (350)
T ss_dssp HHHTTCCEEEEECSCBC-----------CCCCCHHHHHHHHHHCTTSEEEEE---------SSCCSHH---HHHHHHT-T
T ss_pred HHHcCCCEEEEecCchhcccC-cccccCCCcccHHHHHHHHHhCCCCeEEEE---------CCcCCHH---HHHHHHh-C
Confidence 3 79998864321 111 100 0000111223333 334 7899874 3444443 3335555 9
Q ss_pred CcEEeec
Q 010211 400 ADAVMLS 406 (515)
Q Consensus 400 ~D~vmLs 406 (515)
+|+||+.
T Consensus 219 aD~V~iG 225 (350)
T 3b0p_A 219 VDGVMLG 225 (350)
T ss_dssp SSEEEEC
T ss_pred CCEEEEC
Confidence 9999985
No 295
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=42.40 E-value=3.3e+02 Score=28.73 Aligned_cols=152 Identities=12% Similarity=0.015 Sum_probs=90.3
Q ss_pred CCCHhhHHHh-hcchhcCCcEEEecc----cC-----CHHHHHHHHHHHHhcCCCceEEEEec--Chhhhh---------
Q 010211 264 SITDKDWEDI-KFGVDNQVDFYAVSF----VK-----DAKVVHELKDYLKSCNADIHVIVKIE--SADSIP--------- 322 (515)
Q Consensus 264 ~ltekD~~dI-~~al~~gvD~ValSf----Vr-----sa~dv~~vr~~l~~~~~~i~IIaKIE--t~~ave--------- 322 (515)
.++..|+..| +.-.+.|++.|=+.+ +. ++.+...++.+-+. ..++.+.+.+= +.-|..
T Consensus 26 ~~~~~dkl~Ia~~L~~~Gv~~IE~g~~atF~~~~r~~~~d~~e~l~~i~~~-~~~~~l~~l~R~~N~~G~~~~~ddv~~~ 104 (464)
T 2nx9_A 26 RLRIDDMLPIAQQLDQIGYWSLECWGGATFDSCIRFLGEDPWQRLRLLKQA-MPNTPLQMLLRGQNLLGYRHYADDVVDT 104 (464)
T ss_dssp CCCGGGTGGGHHHHHTSCCSEEEEEETTHHHHHHHTTCCCHHHHHHHHHHH-CSSSCEEEEECGGGTTSSSCCCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEeCcCccccchhhccCCCHHHHHHHHHHh-CCCCeEEEEeccccccCcccccchhhHH
Confidence 4566776544 333457999887753 11 45555555554432 23455554442 223332
Q ss_pred cHHHHHhh-cCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHH-HHHhCC
Q 010211 323 NLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAI-AVREGA 400 (515)
Q Consensus 323 NldeIl~~-sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~Dvan-aV~~G~ 400 (515)
+++..++. .|.|-|- ....++ ...+..++.++++|+.|..+- ++...+.-+...+.+++. +...|+
T Consensus 105 ~v~~a~~~Gvd~i~if-------~~~sd~-~ni~~~i~~ak~~G~~v~~~i----~~~~~~~~~~e~~~~~a~~l~~~Ga 172 (464)
T 2nx9_A 105 FVERAVKNGMDVFRVF-------DAMNDV-RNMQQALQAVKKMGAHAQGTL----CYTTSPVHNLQTWVDVAQQLAELGV 172 (464)
T ss_dssp HHHHHHHTTCCEEEEC-------CTTCCT-HHHHHHHHHHHHTTCEEEEEE----ECCCCTTCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhCCcCEEEEE-------EecCHH-HHHHHHHHHHHHCCCEEEEEE----EeeeCCCCCHHHHHHHHHHHHHCCC
Confidence 23444444 6754442 111222 345788999999999986432 233333334445555444 567799
Q ss_pred cEEeecccccCCCCHHHHHHHHHHHHHHH
Q 010211 401 DAVMLSGETAHGKFPLKAVKVMHTVALRT 429 (515)
Q Consensus 401 D~vmLs~ETa~G~yPveaV~~m~~I~~~a 429 (515)
|.+-|. +|+=+-.|-++-+.+..+..+.
T Consensus 173 d~I~l~-DT~G~~~P~~v~~lv~~l~~~~ 200 (464)
T 2nx9_A 173 DSIALK-DMAGILTPYAAEELVSTLKKQV 200 (464)
T ss_dssp SEEEEE-ETTSCCCHHHHHHHHHHHHHHC
T ss_pred CEEEEc-CCCCCcCHHHHHHHHHHHHHhc
Confidence 999985 8888888999988888887766
No 296
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=42.36 E-value=1.2e+02 Score=30.48 Aligned_cols=109 Identities=17% Similarity=0.249 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHhcCCCceEEEEecCh------hhhhcHHHHHhh-cCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcC
Q 010211 293 KVVHELKDYLKSCNADIHVIVKIESA------DSIPNLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQ 365 (515)
Q Consensus 293 ~dv~~vr~~l~~~~~~i~IIaKIEt~------~aveNldeIl~~-sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aG 365 (515)
+-+..++..... +.+..|+++.|.. ++++......+. +|+||+- +.+. .+.+-+.|++..
T Consensus 145 e~~~rI~Aa~~A-~~~~~I~ARtda~~~~g~~~ai~Ra~ay~eAGAD~i~~e--------~~~~----~~~~~~i~~~~~ 211 (305)
T 3ih1_A 145 ELVQKIKAIKEV-APSLYIVARTDARGVEGLDEAIERANAYVKAGADAIFPE--------ALQS----EEEFRLFNSKVN 211 (305)
T ss_dssp HHHHHHHHHHHH-CTTSEEEEEECCHHHHCHHHHHHHHHHHHHHTCSEEEET--------TCCS----HHHHHHHHHHSC
T ss_pred HHHHHHHHHHHc-CCCeEEEEeeccccccCHHHHHHHHHHHHHcCCCEEEEc--------CCCC----HHHHHHHHHHcC
Confidence 445566665544 7889999999987 344444444444 8999983 2222 233445566778
Q ss_pred CcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecccccCCCCHH-HHHHHHHHHHHHH
Q 010211 366 KPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPL-KAVKVMHTVALRT 429 (515)
Q Consensus 366 KPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ETa~G~yPv-eaV~~m~~I~~~a 429 (515)
+|++. +|++-- ..|.++.+| .-..|+..+.. |..+. .+.+.|.+.+++.
T Consensus 212 ~P~~~--n~~~~g-~tp~~~~~e------L~~lGv~~v~~------~~~~~raa~~a~~~~~~~i 261 (305)
T 3ih1_A 212 APLLA--NMTEFG-KTPYYSAEE------FANMGFQMVIY------PVTSLRVAAKAYENVFTLI 261 (305)
T ss_dssp SCBEE--ECCTTS-SSCCCCHHH------HHHTTCSEEEE------CSHHHHHHHHHHHHHHHHH
T ss_pred CCEEE--eecCCC-CCCCCCHHH------HHHcCCCEEEE------chHHHHHHHHHHHHHHHHH
Confidence 89864 343321 234556555 33457777765 33332 3345555555443
No 297
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=42.34 E-value=2.4e+02 Score=27.04 Aligned_cols=54 Identities=15% Similarity=0.180 Sum_probs=31.3
Q ss_pred CCceEEEEe-cCh---hhhhc-HHHHHhh-cCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEE
Q 010211 307 ADIHVIVKI-ESA---DSIPN-LHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIV 370 (515)
Q Consensus 307 ~~i~IIaKI-Et~---~aveN-ldeIl~~-sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPviv 370 (515)
.+++++.+. .++ -|+++ +++..+. +||+++. |+. .++ .++.++.|+++|...+.
T Consensus 93 ~~~Pv~lm~y~n~v~~~g~~~~~~~~~~aGadgii~~--d~~----~e~----~~~~~~~~~~~g~~~i~ 152 (268)
T 1qop_A 93 PTIPIGLLMYANLVFNNGIDAFYARCEQVGVDSVLVA--DVP----VEE----SAPFRQAALRHNIAPIF 152 (268)
T ss_dssp SSSCEEEEECHHHHHTTCHHHHHHHHHHHTCCEEEET--TCC----GGG----CHHHHHHHHHTTCEEEC
T ss_pred CCCCEEEEEcccHHHHhhHHHHHHHHHHcCCCEEEEc--CCC----HHH----HHHHHHHHHHcCCcEEE
Confidence 345666654 332 12232 3334444 8999994 554 233 45677889999987654
No 298
>3h43_A Proteasome-activating nucleotidase; regulatory particle, nucleosidase, ATP-binding, cytoplasm, nucleotide-binding, hydrolase; 2.10A {Methanocaldococcus jannaschii}
Probab=42.26 E-value=86 Score=25.54 Aligned_cols=58 Identities=19% Similarity=0.261 Sum_probs=33.1
Q ss_pred cCCCeeeeeccCCcEEEecCCEEEEEeecCCCCcceEEecccccc--cccCcCCEEEEeC-CeeEEEE
Q 010211 165 TKGPEVRSGDVPQPIILKEGQEFNFTIKRGVSTEDTVSVNYDDFV--NDVEVGDILLVDG-GMMSLAV 229 (515)
Q Consensus 165 L~GPkIRtG~l~~~i~L~~G~~v~lt~~~~~~~~~~i~v~~~~l~--~~v~~Gd~IliDD-G~I~l~V 229 (515)
|++|-.-+|.+ +++-..+.+.+... +.....|+...++ +.++||++|.++. ....+.+
T Consensus 14 L~~~P~~vG~v---~e~~dd~~~iVkss----~g~~~~V~v~~~Vd~~~LkpG~rVaLn~~s~~Iv~v 74 (85)
T 3h43_A 14 MRVPPLIVGTV---VDKVGERKVVVKSS----TGPSFLVNVSHFVNPDDLAPGKRVCLNQQTLTVVDV 74 (85)
T ss_dssp HHSCCEEEEEE---EEEEETTEEEEEET----TSSEEEEEBCTTSCGGGCCTTCEEEECTTTCCEEEE
T ss_pred hcCCCceEEEE---EEEcCCCEEEEEeC----CCCeEEEEecCccCHHHCCCCCEEEECCcccCHhhh
Confidence 45555666665 33333444444322 2234555555554 5899999999997 4444444
No 299
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=42.19 E-value=36 Score=33.86 Aligned_cols=64 Identities=9% Similarity=0.040 Sum_probs=47.9
Q ss_pred HHHhhcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecChhhh--hcHHHHHhh-cCeeEEcC
Q 010211 270 WEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSI--PNLHSIISA-SDGAMVAR 338 (515)
Q Consensus 270 ~~dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~av--eNldeIl~~-sDgImIgr 338 (515)
.+.++.+++.|+|+|.+-. -++++++++.+.+...+.++ +||=--|+ +|+.++++. +|+|-+|.
T Consensus 204 ~eea~eal~aGaD~I~LDn-~~~~~~~~~v~~l~~~~~~v----~ieaSGGIt~~~i~~~a~tGVD~isvG~ 270 (284)
T 1qpo_A 204 LEQLDAVLPEKPELILLDN-FAVWQTQTAVQRRDSRAPTV----MLESSGGLSLQTAATYAETGVDYLAVGA 270 (284)
T ss_dssp HHHHHHHGGGCCSEEEEET-CCHHHHHHHHHHHHHHCTTC----EEEEESSCCTTTHHHHHHTTCSEEECGG
T ss_pred HHHHHHHHHcCCCEEEECC-CCHHHHHHHHHHhhccCCCe----EEEEECCCCHHHHHHHHhcCCCEEEECH
Confidence 4556667788999998876 47888888888887644454 44444444 789999988 99999985
No 300
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=42.09 E-value=2.3e+02 Score=28.79 Aligned_cols=25 Identities=8% Similarity=-0.059 Sum_probs=18.1
Q ss_pred CCCHhhHHHh--------hcchhcCCcEEEecc
Q 010211 264 SITDKDWEDI--------KFGVDNQVDFYAVSF 288 (515)
Q Consensus 264 ~ltekD~~dI--------~~al~~gvD~ValSf 288 (515)
.||..|++.+ +.+.+.|+|+|=+-.
T Consensus 150 ~mt~~eI~~ii~~f~~AA~~A~~aGfDgVEih~ 182 (361)
T 3gka_A 150 ALELDEIPGVVAAFRRGAENARAAGFDGVEVHG 182 (361)
T ss_dssp ECCGGGHHHHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECC
Confidence 5788888776 234678999987743
No 301
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=42.03 E-value=1e+02 Score=30.13 Aligned_cols=96 Identities=11% Similarity=-0.021 Sum_probs=55.1
Q ss_pred HHhhcchhcCCcEEEec------ccCCHHHHHHHHHHHHhcCCCceEEEEec---ChhhhhcHHHHHhh-cCeeEEcCCc
Q 010211 271 EDIKFGVDNQVDFYAVS------FVKDAKVVHELKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARGD 340 (515)
Q Consensus 271 ~dI~~al~~gvD~ValS------fVrsa~dv~~vr~~l~~~~~~i~IIaKIE---t~~aveNldeIl~~-sDgImIgrgD 340 (515)
+.++|-++.|+|++.+. +.-+.++-.++-+...+.... ||+-+= |.++++......+. +|++|+-+-.
T Consensus 24 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~g--viaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~ 101 (293)
T 1w3i_A 24 IHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNK--IIFQVGGLNLDDAIRLAKLSKDFDIVGIASYAPY 101 (293)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSC--EEEECCCSCHHHHHHHHHHGGGSCCSEEEEECCC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCC--EEEecCCCCHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 45577788999998762 333444444444443333233 888773 46666655555444 8999987544
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcCCcEEEE
Q 010211 341 LGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (515)
Q Consensus 341 Lg~elg~e~v~~aqk~Ii~~c~~aGKPvivA 371 (515)
..-. +.-..+.+..-+.+.+.+.|+++.
T Consensus 102 y~~~---~s~~~l~~~f~~va~a~~lPiilY 129 (293)
T 1w3i_A 102 YYPR---MSEKHLVKYFKTLCEVSPHPVYLY 129 (293)
T ss_dssp SCSS---CCHHHHHHHHHHHHHHCSSCEEEE
T ss_pred CCCC---CCHHHHHHHHHHHHhhCCCCEEEE
Confidence 3210 122333333334456678999984
No 302
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=41.75 E-value=1.3e+02 Score=27.86 Aligned_cols=88 Identities=6% Similarity=-0.011 Sum_probs=58.2
Q ss_pred HHhhcchhcCCcEEEeccc-----CCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh-----cCeeEEcCCc
Q 010211 271 EDIKFGVDNQVDFYAVSFV-----KDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-----SDGAMVARGD 340 (515)
Q Consensus 271 ~dI~~al~~gvD~ValSfV-----rsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-----sDgImIgrgD 340 (515)
+.++.+.+.|.|+|-+... .+.+++.++++.+++.|-.+..+.-- ..+.++.+++.++. ++.|.+-++
T Consensus 34 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~-~~~~~~~~~~~i~~A~~lGa~~v~~~p~- 111 (257)
T 3lmz_A 34 TTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGYAVGPI-YMKSEEEIDRAFDYAKRVGVKLIVGVPN- 111 (257)
T ss_dssp HHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEEEEEEEE-EECSHHHHHHHHHHHHHHTCSEEEEEEC-
T ss_pred HHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeEEEEecc-ccCCHHHHHHHHHHHHHhCCCEEEecCC-
Confidence 5567778899999977643 36788899999999877654433211 11344555555443 566776554
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcCCcEEE
Q 010211 341 LGAELPIEDVPLLQEDIIRRCRSMQKPVIV 370 (515)
Q Consensus 341 Lg~elg~e~v~~aqk~Ii~~c~~aGKPviv 370 (515)
....+++.+.|.++|..+.+
T Consensus 112 ----------~~~l~~l~~~a~~~gv~l~l 131 (257)
T 3lmz_A 112 ----------YELLPYVDKKVKEYDFHYAI 131 (257)
T ss_dssp ----------GGGHHHHHHHHHHHTCEEEE
T ss_pred ----------HHHHHHHHHHHHHcCCEEEE
Confidence 13457888899999988776
No 303
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=41.67 E-value=1.1e+02 Score=29.94 Aligned_cols=95 Identities=18% Similarity=0.188 Sum_probs=55.0
Q ss_pred HHHHhh-cCeeEEcCCc--ccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHH-HhHHHHHHHhCC
Q 010211 325 HSIISA-SDGAMVARGD--LGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGA 400 (515)
Q Consensus 325 deIl~~-sDgImIgrgD--Lg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAE-v~DvanaV~~G~ 400 (515)
+-.++. +||+++. |= =+..+..++-..+.+.+++.++. ..||+..+ +..+-.| +...-.+-..|+
T Consensus 28 ~~li~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~g-r~pviaGv---------g~~~t~~ai~la~~A~~~Ga 96 (292)
T 2vc6_A 28 EWQIEEGSFGLVPC-GTTGESPTLSKSEHEQVVEITIKTANG-RVPVIAGA---------GSNSTAEAIAFVRHAQNAGA 96 (292)
T ss_dssp HHHHHTTCSEEETT-SGGGTGGGSCHHHHHHHHHHHHHHHTT-SSCBEEEC---------CCSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEec---------CCccHHHHHHHHHHHHHcCC
Confidence 444444 8999874 21 11222334444455555555432 47888743 4444455 555556677799
Q ss_pred cEEeecccccCCCCHHHHHHHHHHHHHHHh
Q 010211 401 DAVMLSGETAHGKFPLKAVKVMHTVALRTE 430 (515)
Q Consensus 401 D~vmLs~ETa~G~yPveaV~~m~~I~~~aE 430 (515)
|++|+..=--...-+-+.++....|+..+.
T Consensus 97 davlv~~P~y~~~s~~~l~~~f~~ia~a~~ 126 (292)
T 2vc6_A 97 DGVLIVSPYYNKPTQEGIYQHFKAIDAAST 126 (292)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHHHCS
T ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 999986332222334677888888887664
No 304
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=41.57 E-value=25 Score=36.67 Aligned_cols=43 Identities=28% Similarity=0.381 Sum_probs=33.5
Q ss_pred EecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHH
Q 010211 105 CTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKE 149 (515)
Q Consensus 105 ~TiGPss~~~e~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~ 149 (515)
+.+|+.. .+.++.++++|++++=|+.+||.++.+.+.++.+|+
T Consensus 139 ~~v~~~~--~e~~~~lveaGvdvIvldta~G~~~~~~e~I~~ik~ 181 (400)
T 3ffs_A 139 AAIGVNE--IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKS 181 (400)
T ss_dssp EEECCC---CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHHHHT
T ss_pred eecCCCH--HHHHHHHHHcCCCEEEEeCCCCCcccHHHHHHHHHh
Confidence 3455543 789999999999999999999988776666666653
No 305
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=41.27 E-value=1.2e+02 Score=29.69 Aligned_cols=95 Identities=18% Similarity=0.149 Sum_probs=54.7
Q ss_pred HHHHhh-cCeeEEcCCcc--cccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHH-HhHHHHHHHhCC
Q 010211 325 HSIISA-SDGAMVARGDL--GAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGA 400 (515)
Q Consensus 325 deIl~~-sDgImIgrgDL--g~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAE-v~DvanaV~~G~ 400 (515)
+-.++. +|||++. |=- +..+..++-..+.+.+++.++. ..||+..+ +..+-.| +...-.+-..|+
T Consensus 28 ~~li~~Gv~gi~v~-GttGE~~~Ls~~Er~~v~~~~~~~~~g-rvpviaGv---------g~~~t~~ai~la~~A~~~Ga 96 (297)
T 2rfg_A 28 DWQIKHGAHGLVPV-GTTGESPTLTEEEHKRVVALVAEQAQG-RVPVIAGA---------GSNNPVEAVRYAQHAQQAGA 96 (297)
T ss_dssp HHHHHTTCSEEECS-SGGGTGGGSCHHHHHHHHHHHHHHHTT-SSCBEEEC---------CCSSHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCCEEEEC-ccccchhhCCHHHHHHHHHHHHHHhCC-CCeEEEcc---------CCCCHHHHHHHHHHHHhcCC
Confidence 334444 8999875 211 1222334444555555555432 47888743 4444455 445555667799
Q ss_pred cEEeecccccCCCCHHHHHHHHHHHHHHHh
Q 010211 401 DAVMLSGETAHGKFPLKAVKVMHTVALRTE 430 (515)
Q Consensus 401 D~vmLs~ETa~G~yPveaV~~m~~I~~~aE 430 (515)
|++|+..=--...-+-+.++....|+..+.
T Consensus 97 davlv~~P~y~~~s~~~l~~~f~~va~a~~ 126 (297)
T 2rfg_A 97 DAVLCVAGYYNRPSQEGLYQHFKMVHDAID 126 (297)
T ss_dssp SEEEECCCTTTCCCHHHHHHHHHHHHHHCS
T ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999986322222334667788888887664
No 306
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=41.23 E-value=63 Score=33.05 Aligned_cols=99 Identities=13% Similarity=0.061 Sum_probs=54.0
Q ss_pred CCCCHhhHHHh-hcchhcCCcEEEecccC--C---------------------HHHHHHHHHHHHhcCCCceEEE--Eec
Q 010211 263 PSITDKDWEDI-KFGVDNQVDFYAVSFVK--D---------------------AKVVHELKDYLKSCNADIHVIV--KIE 316 (515)
Q Consensus 263 p~ltekD~~dI-~~al~~gvD~ValSfVr--s---------------------a~dv~~vr~~l~~~~~~i~IIa--KIE 316 (515)
|.+++.|..++ +.+.+.|+|+|.++--. + +..++.++++-+..+.++.||+ -|.
T Consensus 229 p~~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~ 308 (367)
T 3zwt_A 229 PDLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVS 308 (367)
T ss_dssp SCCCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCC
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEECCCC
Confidence 34566676555 45567899999876321 0 0012333333333345677776 466
Q ss_pred ChhhhhcHHHHHhh-cCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCC
Q 010211 317 SADSIPNLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQK 366 (515)
Q Consensus 317 t~~aveNldeIl~~-sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGK 366 (515)
|.+-+ .+.+.. +|+|+|||+=|-- |..-+..+.+.+-+...+.|.
T Consensus 309 s~~da---~~~l~~GAd~V~vgra~l~~--gP~~~~~i~~~l~~~m~~~G~ 354 (367)
T 3zwt_A 309 SGQDA---LEKIRAGASLVQLYTALTFW--GPPVVGKVKRELEALLKEQGF 354 (367)
T ss_dssp SHHHH---HHHHHHTCSEEEESHHHHHH--CTHHHHHHHHHHHHHHHHTTC
T ss_pred CHHHH---HHHHHcCCCEEEECHHHHhc--CcHHHHHHHHHHHHHHHHcCC
Confidence 55333 333334 9999999986521 322344455555555555553
No 307
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=41.09 E-value=46 Score=32.98 Aligned_cols=52 Identities=23% Similarity=0.353 Sum_probs=36.1
Q ss_pred HHHHHHHHhCCcEEEEec-CC--C-----ChHHHHHHHHHHHHHHhhcCCceEEEEEecCCCee
Q 010211 115 EMIWKLAEEGMNVARLNM-SH--G-----DHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEV 170 (515)
Q Consensus 115 e~i~~li~aGm~v~RiN~-SH--g-----~~e~~~~~i~~ir~~~~~~~~~~i~I~lDL~GPkI 170 (515)
+..++|+++|.++.=||. |- | ..|++.+++..|+.+.++ + +.|.+|+.-|++
T Consensus 33 ~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~-~---~piSIDT~~~~v 92 (280)
T 1eye_A 33 KHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQ-G---ITVSIDTMRADV 92 (280)
T ss_dssp HHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHHT-T---CCEEEECSCHHH
T ss_pred HHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcC-C---CEEEEeCCCHHH
Confidence 356789999999999997 42 1 257888888888887664 4 557889877764
No 308
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=41.03 E-value=63 Score=32.29 Aligned_cols=53 Identities=13% Similarity=0.284 Sum_probs=40.1
Q ss_pred HHHHHHHHhCCcEEEEecCC--------CChHHHHHHHHHHHHHHhhcCCceEEEEEecCCCee
Q 010211 115 EMIWKLAEEGMNVARLNMSH--------GDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEV 170 (515)
Q Consensus 115 e~i~~li~aGm~v~RiN~SH--------g~~e~~~~~i~~ir~~~~~~~~~~i~I~lDL~GPkI 170 (515)
+..++|++.|.++.=||.-- ...|++.+++..|+.+.++.+ +.|.+|+.-|++
T Consensus 67 ~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~~---vpiSIDT~~~~V 127 (297)
T 1tx2_A 67 RHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEVK---LPISIDTYKAEV 127 (297)
T ss_dssp HHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHSC---SCEEEECSCHHH
T ss_pred HHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcCC---ceEEEeCCCHHH
Confidence 35678999999999999733 125788888888888776665 557889876664
No 309
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=40.89 E-value=1.3e+02 Score=28.62 Aligned_cols=114 Identities=19% Similarity=0.214 Sum_probs=59.9
Q ss_pred chhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhhcCe-eEEcC-Cc-ccccCCCCCHHH
Q 010211 276 GVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDG-AMVAR-GD-LGAELPIEDVPL 352 (515)
Q Consensus 276 al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDg-ImIgr-gD-Lg~elg~e~v~~ 352 (515)
+.+.|+|+|.++-.. .+++.++.+.+++.|-+..+... .....+.+.++.+..++ +.+.. +. -|..-+.+ +.
T Consensus 114 a~~aGadgv~v~d~~-~~~~~~~~~~~~~~g~~~i~~~a--~~t~~e~~~~~~~~~~g~v~~~s~~G~tG~~~~~~--~~ 188 (262)
T 1rd5_A 114 MKEAGVHGLIVPDLP-YVAAHSLWSEAKNNNLELVLLTT--PAIPEDRMKEITKASEGFVYLVSVNGVTGPRANVN--PR 188 (262)
T ss_dssp HHHTTCCEEECTTCB-TTTHHHHHHHHHHTTCEECEEEC--TTSCHHHHHHHHHHCCSCEEEECSSCCBCTTSCBC--TH
T ss_pred HHHcCCCEEEEcCCC-hhhHHHHHHHHHHcCCceEEEEC--CCCCHHHHHHHHhcCCCeEEEecCCCCCCCCcCCC--ch
Confidence 667899998886433 24456666666666654333333 32335567777777554 43432 11 11211221 12
Q ss_pred HHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeec
Q 010211 353 LQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (515)
Q Consensus 353 aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs 406 (515)
..+.+-+..+..+.|+++.. +.-+.. ++..+...|+|++..-
T Consensus 189 ~~~~i~~v~~~~~~pI~vgG---------GI~~~e---~~~~~~~~GAdgvvVG 230 (262)
T 1rd5_A 189 VESLIQEVKKVTNKPVAVGF---------GISKPE---HVKQIAQWGADGVIIG 230 (262)
T ss_dssp HHHHHHHHHHHCSSCEEEES---------CCCSHH---HHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHhhcCCeEEEEC---------CcCCHH---HHHHHHHcCCCEEEEC
Confidence 22222222333478988742 333332 3445666799999864
No 310
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=40.85 E-value=1.9e+02 Score=28.81 Aligned_cols=120 Identities=16% Similarity=0.208 Sum_probs=71.1
Q ss_pred HHhhcchhcCCcEEEecccCCH--HHHHHHHHHHHhcCCCceEEEEe---cChhhhhcHHHHHhh-cCeeEEcCCccccc
Q 010211 271 EDIKFGVDNQVDFYAVSFVKDA--KVVHELKDYLKSCNADIHVIVKI---ESADSIPNLHSIISA-SDGAMVARGDLGAE 344 (515)
Q Consensus 271 ~dI~~al~~gvD~ValSfVrsa--~dv~~vr~~l~~~~~~i~IIaKI---Et~~aveNldeIl~~-sDgImIgrgDLg~e 344 (515)
+||+.+.+.|+|+|.+.+...- -|+...+++++.++. ..+.-.= +..+-.+.++.++.. +|-|+-.-+.-++.
T Consensus 115 ~dI~~~~~~GAdGvVfG~L~~dg~iD~~~~~~Li~~a~~-l~vTFHRAFD~~~d~~~Ale~Li~lGvdrILTSG~~~~a~ 193 (287)
T 3iwp_A 115 ADIRLAKLYGADGLVFGALTEDGHIDKELCMSLMAICRP-LPVTFHRAFDMVHDPMAALETLLTLGFERVLTSGCDSSAL 193 (287)
T ss_dssp HHHHHHHHTTCSEEEECCBCTTSCBCHHHHHHHHHHHTT-SCEEECGGGGGCSCHHHHHHHHHHHTCSEEEECTTSSSTT
T ss_pred HHHHHHHHcCCCEEEEeeeCCCCCcCHHHHHHHHHHcCC-CcEEEECchhccCCHHHHHHHHHHcCCCEEECCCCCCChH
Confidence 6778888999999999985433 577788888877654 3332210 222356677888886 89999976644433
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeeccc
Q 010211 345 LPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGE 408 (515)
Q Consensus 345 lg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~E 408 (515)
+.+..+ +++++. ..|+..|++. -.-.++. +.++.. .-|++.+=+|+-
T Consensus 194 ---~Gl~~L-k~Lv~~--a~~rI~ImaG-------GGV~~~N--i~~l~~--~tG~~~~H~S~~ 240 (287)
T 3iwp_A 194 ---EGLPLI-KRLIEQ--AKGRIVVMPG-------GGITDRN--LQRILE--GSGATEFHCSAR 240 (287)
T ss_dssp ---TTHHHH-HHHHHH--HTTSSEEEEC-------TTCCTTT--HHHHHH--HHCCSEEEECCE
T ss_pred ---HhHHHH-HHHHHH--hCCCCEEEEC-------CCcCHHH--HHHHHH--hhCCCEEeECcC
Confidence 333333 333333 3345556542 2223332 333322 168998888753
No 311
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=40.84 E-value=1.3e+02 Score=33.95 Aligned_cols=102 Identities=16% Similarity=0.132 Sum_probs=71.2
Q ss_pred CHhhHHHhhcchhcCCcEEEe-------------------cccCCH--HHHHHHHHHHHhcCCCceEEEEecChhhhhc-
Q 010211 266 TDKDWEDIKFGVDNQVDFYAV-------------------SFVKDA--KVVHELKDYLKSCNADIHVIVKIESADSIPN- 323 (515)
Q Consensus 266 tekD~~dI~~al~~gvD~Val-------------------SfVrsa--~dv~~vr~~l~~~~~~i~IIaKIEt~~aveN- 323 (515)
++.-++-|+||.++|.++|.+ .|+.-- -|+.++.+|-+++ .+.|+.-.|+..++.|
T Consensus 370 te~~K~YIDFAA~~G~eyvLveGwD~GW~~~~~~~~~~~fd~~~p~pd~Dl~eL~~YA~sK--GV~iilw~~t~~~~~n~ 447 (738)
T 2d73_A 370 TANVKRYIDFAAAHGFDAVLVEGWNEGWEDWFGNSKDYVFDFVTPYPDFDVKEIHRYAARK--GIKMMMHHETSASVRNY 447 (738)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECSCBTTGGGCSSSCCSSCCCSSCBCTTCCHHHHHHHHHHT--TCEEEEEEECTTBHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeccCCcccccCccccccccccccCCCCCHHHHHHHHHhC--CCEEEEEEcCCCchhhH
Confidence 445578999999999999998 121111 2488899998774 5889999999986554
Q ss_pred ---HHHHHhh-----cCeeEEcC-CcccccCCC----CCHHHHHHHHHHHHHhcCCcEEE
Q 010211 324 ---LHSIISA-----SDGAMVAR-GDLGAELPI----EDVPLLQEDIIRRCRSMQKPVIV 370 (515)
Q Consensus 324 ---ldeIl~~-----sDgImIgr-gDLg~elg~----e~v~~aqk~Ii~~c~~aGKPviv 370 (515)
+|+.++. +.||-++= ||+ +.-+- ..+.....+|++.|.+++.-|..
T Consensus 448 e~~~d~~f~~~~~~Gv~GVKvdF~g~~-~~r~~~h~~Q~~v~~Y~~i~~~AA~~~LmVnf 506 (738)
T 2d73_A 448 ERHMDKAYQFMADNGYNSVKSGYVGNI-IPRGEHHYGQWMNNHYLYAVKKAADYKIMVNA 506 (738)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCSSC-BSTTCCTTSHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEeCccccC-cCCcccccchHHHHHHHHHHHHHHHcCcEEEc
Confidence 4555554 67876652 121 11110 34777889999999999998887
No 312
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=40.82 E-value=95 Score=30.96 Aligned_cols=57 Identities=21% Similarity=0.239 Sum_probs=38.5
Q ss_pred HHhcCCcEEE-EeccccccccCCCcChHHHhHHHHHHHhCCcEEeecccccCCCCHHHHHHHHHHHHHH
Q 010211 361 CRSMQKPVIV-ATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALR 428 (515)
Q Consensus 361 c~~aGKPviv-ATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~ 428 (515)
+.....|+++ | ..+.-+.. |+..++..|+|++++-+---....|.++++.+.+....
T Consensus 203 ~~~~~iPVivvA--------~GGI~t~~---dv~~~~~~GAdgVlVGsai~~a~dp~~~~~~l~~ai~~ 260 (297)
T 4adt_A 203 RKLKRLPVVNFA--------AGGIATPA---DAAMCMQLGMDGVFVGSGIFESENPQKMASSIVMAVSN 260 (297)
T ss_dssp HHHTSCSSEEEE--------ESCCCSHH---HHHHHHHTTCSCEEESHHHHTSSCHHHHHHHHHHHHHT
T ss_pred HHhcCCCeEEEe--------cCCCCCHH---HHHHHHHcCCCEEEEhHHHHcCCCHHHHHHHHHHHHHh
Confidence 4445789873 3 44554543 56677888999999864444566898988887766543
No 313
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=40.69 E-value=37 Score=35.14 Aligned_cols=68 Identities=13% Similarity=0.189 Sum_probs=41.7
Q ss_pred HHHhhcchhcCCcEEEecccC------CHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh----cCeeEEcCC
Q 010211 270 WEDIKFGVDNQVDFYAVSFVK------DAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA----SDGAMVARG 339 (515)
Q Consensus 270 ~~dI~~al~~gvD~ValSfVr------sa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~----sDgImIgrg 339 (515)
.++.+.+.+.|+|+|.+|--- ....+..+.+..+..+.++.||+ --||.+-+++++. +|+++|||.
T Consensus 263 ~e~A~~a~~aGad~I~vs~~ggr~~~~g~~~~~~l~~v~~av~~~ipVia----~GGI~~g~Dv~kalalGAd~V~iGr~ 338 (392)
T 2nzl_A 263 GDDAREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAVEGKVEVFL----DGGVRKGTDVLKALALGAKAVFVGRP 338 (392)
T ss_dssp HHHHHHHHHTTCCEEEECCGGGTSSTTCCCHHHHHHHHHHHHTTSSEEEE----CSSCCSHHHHHHHHHTTCSEEEECHH
T ss_pred HHHHHHHHHcCCCEEEeCCCCCCcCCCCcChHHHHHHHHHHcCCCCEEEE----ECCCCCHHHHHHHHHhCCCeeEECHH
Confidence 345667778999999986311 11233334444333345688887 2355555665554 899999985
Q ss_pred cc
Q 010211 340 DL 341 (515)
Q Consensus 340 DL 341 (515)
=|
T Consensus 339 ~l 340 (392)
T 2nzl_A 339 IV 340 (392)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 314
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=40.63 E-value=2.8e+02 Score=27.38 Aligned_cols=145 Identities=13% Similarity=0.067 Sum_probs=73.4
Q ss_pred ceeeeCCCccCCCCCCHhhHHHhhcchhcCC-cEEEecccCCHHHHHHHHHHHHhcCCCceEEEE--ecChhhhhcHHHH
Q 010211 251 RHLNVRGKSANLPSITDKDWEDIKFGVDNQV-DFYAVSFVKDAKVVHELKDYLKSCNADIHVIVK--IESADSIPNLHSI 327 (515)
Q Consensus 251 KgVnlpg~~~~lp~ltekD~~dI~~al~~gv-D~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaK--IEt~~aveNldeI 327 (515)
.++..|=..-++..++ +.+....+.+.|. .++...++ +++.+.+.-+.+.+.-+ ..+.+. +-++.--+.++.+
T Consensus 23 l~~~~Pii~apM~gvs--~~~la~av~~aGglG~i~~~~~-~~~~l~~~i~~i~~~~~-~p~gVnl~~~~~~~~~~~~~~ 98 (326)
T 3bo9_A 23 LEIEHPILMGGMAWAG--TPTLAAAVSEAGGLGIIGSGAM-KPDDLRKAISELRQKTD-KPFGVNIILVSPWADDLVKVC 98 (326)
T ss_dssp HTCSSSEEECCCTTTS--CHHHHHHHHHTTSBEEEECTTC-CHHHHHHHHHHHHTTCS-SCEEEEEETTSTTHHHHHHHH
T ss_pred cCCCCCEEECCCCCCC--CHHHHHHHHhCCCcEEeCCCCC-CHHHHHHHHHHHHHhcC-CCEEEEEeccCCCHHHHHHHH
Confidence 3444453333333333 3444444555665 44444443 56665444333443222 222222 2233333344444
Q ss_pred Hhh-cCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeec
Q 010211 328 ISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (515)
Q Consensus 328 l~~-sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs 406 (515)
++. +|+|.++-|+ + ..+++.+++.|.+++... .+.. +...+...|+|++.+.
T Consensus 99 ~~~g~d~V~l~~g~-----p--------~~~~~~l~~~g~~v~~~v-----------~s~~---~a~~a~~~GaD~i~v~ 151 (326)
T 3bo9_A 99 IEEKVPVVTFGAGN-----P--------TKYIRELKENGTKVIPVV-----------ASDS---LARMVERAGADAVIAE 151 (326)
T ss_dssp HHTTCSEEEEESSC-----C--------HHHHHHHHHTTCEEEEEE-----------SSHH---HHHHHHHTTCSCEEEE
T ss_pred HHCCCCEEEECCCC-----c--------HHHHHHHHHcCCcEEEEc-----------CCHH---HHHHHHHcCCCEEEEE
Confidence 444 8999987542 2 245677778899988731 2222 3345677899999996
Q ss_pred cccc---CCCCHHHHHHHHHHHHHH
Q 010211 407 GETA---HGKFPLKAVKVMHTVALR 428 (515)
Q Consensus 407 ~ETa---~G~yPveaV~~m~~I~~~ 428 (515)
+=.+ .|..| ....+..+...
T Consensus 152 g~~~GG~~G~~~--~~~ll~~i~~~ 174 (326)
T 3bo9_A 152 GMESGGHIGEVT--TFVLVNKVSRS 174 (326)
T ss_dssp CTTSSEECCSSC--HHHHHHHHHHH
T ss_pred CCCCCccCCCcc--HHHHHHHHHHH
Confidence 5222 24222 44555555443
No 315
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=40.47 E-value=2.1e+02 Score=25.96 Aligned_cols=116 Identities=13% Similarity=0.141 Sum_probs=66.4
Q ss_pred CCCCHhhHHHh-hcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecCh---------hhhhcHHHHHhh-c
Q 010211 263 PSITDKDWEDI-KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESA---------DSIPNLHSIISA-S 331 (515)
Q Consensus 263 p~ltekD~~dI-~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~---------~aveNldeIl~~-s 331 (515)
|.-...+...+ +...+.|++++-+ .+.+.++.+++.. +..++..+.+. .-.+.++..++. +
T Consensus 18 p~~~~~~~~~~a~~~~~~Ga~~i~~---~~~~~i~~i~~~~-----~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~~Ga 89 (223)
T 1y0e_A 18 PLHSSFIMSKMALAAYEGGAVGIRA---NTKEDILAIKETV-----DLPVIGIVKRDYDHSDVFITATSKEVDELIESQC 89 (223)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEE---ESHHHHHHHHHHC-----CSCEEEECBCCCTTCCCCBSCSHHHHHHHHHHTC
T ss_pred CCCCCccHHHHHHHHHHCCCeeecc---CCHHHHHHHHHhc-----CCCEEeeeccCCCccccccCCcHHHHHHHHhCCC
Confidence 34344444444 4455789998854 5777777777654 23443221110 112445555555 8
Q ss_pred CeeEEcCCcccccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeec
Q 010211 332 DGAMVARGDLGAELPIEDVPLLQEDIIRRCRSM--QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (515)
Q Consensus 332 DgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~a--GKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs 406 (515)
|.+.++-.++.- +.+.+ .++++.+++. |+++++-. .|..| ...+...|+|.++++
T Consensus 90 d~v~l~~~~~~~--p~~~~----~~~i~~~~~~~~~~~v~~~~-----------~t~~e---~~~~~~~G~d~i~~~ 146 (223)
T 1y0e_A 90 EVIALDATLQQR--PKETL----DELVSYIRTHAPNVEIMADI-----------ATVEE---AKNAARLGFDYIGTT 146 (223)
T ss_dssp SEEEEECSCSCC--SSSCH----HHHHHHHHHHCTTSEEEEEC-----------SSHHH---HHHHHHTTCSEEECT
T ss_pred CEEEEeeecccC--cccCH----HHHHHHHHHhCCCceEEecC-----------CCHHH---HHHHHHcCCCEEEeC
Confidence 999887543310 10222 4677777777 88887621 23333 345788999999875
No 316
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=40.38 E-value=1.8e+02 Score=29.69 Aligned_cols=95 Identities=15% Similarity=0.135 Sum_probs=49.9
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh-cCeeEEcCCcccccC-CCCCHHHHHHHHHHHHHhcCCcE
Q 010211 291 DAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAEL-PIEDVPLLQEDIIRRCRSMQKPV 368 (515)
Q Consensus 291 sa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDgImIgrgDLg~el-g~e~v~~aqk~Ii~~c~~aGKPv 368 (515)
+.+++..+++.. +.+|++|.= ...+......+. +|+|.+. |--|..+ +-+.-..+..++.++.. -..||
T Consensus 205 ~w~~i~~lr~~~-----~~PvivK~v--~~~e~A~~a~~~GaD~I~vs-n~GG~~~d~~~~~~~~L~~i~~av~-~~ipV 275 (352)
T 3sgz_A 205 CWNDLSLLQSIT-----RLPIILKGI--LTKEDAELAMKHNVQGIVVS-NHGGRQLDEVSASIDALREVVAAVK-GKIEV 275 (352)
T ss_dssp CHHHHHHHHHHC-----CSCEEEEEE--CSHHHHHHHHHTTCSEEEEC-CGGGTSSCSSCCHHHHHHHHHHHHT-TSSEE
T ss_pred CHHHHHHHHHhc-----CCCEEEEec--CcHHHHHHHHHcCCCEEEEe-CCCCCccCCCccHHHHHHHHHHHhC-CCCeE
Confidence 445555555532 456677731 122333333333 7888873 1111111 11223344444444332 25788
Q ss_pred EEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeec
Q 010211 369 IVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (515)
Q Consensus 369 ivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs 406 (515)
|.. .+.-+ -.|++.++..|+|+|++.
T Consensus 276 ia~---------GGI~~---g~Dv~kaLalGA~aV~iG 301 (352)
T 3sgz_A 276 YMD---------GGVRT---GTDVLKALALGARCIFLG 301 (352)
T ss_dssp EEE---------SSCCS---HHHHHHHHHTTCSEEEES
T ss_pred EEE---------CCCCC---HHHHHHHHHcCCCEEEEC
Confidence 874 33333 358899999999999985
No 317
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=40.38 E-value=57 Score=30.02 Aligned_cols=86 Identities=14% Similarity=0.008 Sum_probs=46.8
Q ss_pred HHhhcchhcCCcEEEecccCC-----HHHHHHHHHHHHhcCCCceEEE--EecChhhhhcHHHHHhh-cCeeEEcCCccc
Q 010211 271 EDIKFGVDNQVDFYAVSFVKD-----AKVVHELKDYLKSCNADIHVIV--KIESADSIPNLHSIISA-SDGAMVARGDLG 342 (515)
Q Consensus 271 ~dI~~al~~gvD~ValSfVrs-----a~dv~~vr~~l~~~~~~i~IIa--KIEt~~aveNldeIl~~-sDgImIgrgDLg 342 (515)
+.++.+.+.|+|+|.+..+.. .-+...++++.+.. ++.+++ =|.+ .+|+.+.++. +||+++|++=+.
T Consensus 158 e~~~~~~~~G~d~i~~~~~~~~g~~~~~~~~~i~~l~~~~--~~pvia~GGi~~---~~~~~~~~~~Ga~~v~vgsal~~ 232 (253)
T 1h5y_A 158 KWAKEVEELGAGEILLTSIDRDGTGLGYDVELIRRVADSV--RIPVIASGGAGR---VEHFYEAAAAGADAVLAASLFHF 232 (253)
T ss_dssp HHHHHHHHHTCSEEEEEETTTTTTCSCCCHHHHHHHHHHC--SSCEEEESCCCS---HHHHHHHHHTTCSEEEESHHHHT
T ss_pred HHHHHHHhCCCCEEEEecccCCCCcCcCCHHHHHHHHHhc--CCCEEEeCCCCC---HHHHHHHHHcCCcHHHHHHHHHc
Confidence 445666778999987643321 11233333333322 455555 3333 3566666665 899999975433
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcCCcE
Q 010211 343 AELPIEDVPLLQEDIIRRCRSMQKPV 368 (515)
Q Consensus 343 ~elg~e~v~~aqk~Ii~~c~~aGKPv 368 (515)
...+ .+++.+..+++|.++
T Consensus 233 ~~~~-------~~~~~~~l~~~g~~~ 251 (253)
T 1h5y_A 233 RVLS-------IAQVKRYLKERGVEV 251 (253)
T ss_dssp TSSC-------HHHHHHHHHHTTCBC
T ss_pred CCCC-------HHHHHHHHHHcCCCC
Confidence 2222 234455566777664
No 318
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A*
Probab=40.34 E-value=55 Score=31.79 Aligned_cols=52 Identities=10% Similarity=0.191 Sum_probs=34.5
Q ss_pred CHHHHHHHHHhCCcEEEEecCC---------CCh-HHHHHHHHHHHHHHhhcCCceEEEEEecCC
Q 010211 113 SREMIWKLAEEGMNVARLNMSH---------GDH-ASHQKTIDLVKEYNSQFEDKAVAIMLDTKG 167 (515)
Q Consensus 113 ~~e~i~~li~aGm~v~RiN~SH---------g~~-e~~~~~i~~ir~~~~~~~~~~i~I~lDL~G 167 (515)
+.+.|+.|-+.|+|++||-++. +.. +...+.++.+=+...+.| +.+++|+-+
T Consensus 43 ~~~d~~~l~~~G~n~vRi~i~w~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~G---i~vildlh~ 104 (320)
T 3nco_A 43 EDEYFKIIKERGFDSVRIPIRWSAHISEKYPYEIDKFFLDRVKHVVDVALKND---LVVIINCHH 104 (320)
T ss_dssp CHHHHHHHHHHTCCEEEECCCGGGSBCSSTTCCBCHHHHHHHHHHHHHHHHTT---CEEEEECCC
T ss_pred CHHHHHHHHHCCCCEEEEeeehHHhcCCCCCCccCHHHHHHHHHHHHHHHHCC---CEEEEEcCC
Confidence 5889999999999999997642 221 222334444434444556 778889865
No 319
>2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A*
Probab=40.18 E-value=44 Score=32.42 Aligned_cols=52 Identities=12% Similarity=0.092 Sum_probs=33.7
Q ss_pred CHHHHHHHHH-hCCcEEEEecCCC------ChHHHHHHHHHHHHHHhhcCCceEEEEEecCC
Q 010211 113 SREMIWKLAE-EGMNVARLNMSHG------DHASHQKTIDLVKEYNSQFEDKAVAIMLDTKG 167 (515)
Q Consensus 113 ~~e~i~~li~-aGm~v~RiN~SHg------~~e~~~~~i~~ir~~~~~~~~~~i~I~lDL~G 167 (515)
+.+.++.|.+ .|+|++|+-+... +++.+.+.++.+=+...+.| +.+++|+-+
T Consensus 44 ~~~d~~~l~~~~G~N~vRi~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~G---l~vild~h~ 102 (306)
T 2cks_A 44 TDSSLDALAYDWKADIIRLSMYIQEDGYETNPRGFTDRMHQLIDMATARG---LYVIVDWHI 102 (306)
T ss_dssp SHHHHHHHHHTSCCSEEEEEEESSTTSGGGCHHHHHHHHHHHHHHHHTTT---CEEEEEEEC
T ss_pred CHHHHHHHHHHcCCCEEEEEeeecCCCcccCHHHHHHHHHHHHHHHHHCC---CEEEEEecC
Confidence 4678898986 7999999987642 22223344444444455555 777888754
No 320
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=40.16 E-value=30 Score=32.17 Aligned_cols=100 Identities=11% Similarity=0.097 Sum_probs=63.1
Q ss_pred HHhhcchhcCCcEEEecccC-CHHHHHHHHHHHHhcCCCceEEE---EecC------hhhhhcHHHHHhh-----cCeeE
Q 010211 271 EDIKFGVDNQVDFYAVSFVK-DAKVVHELKDYLKSCNADIHVIV---KIES------ADSIPNLHSIISA-----SDGAM 335 (515)
Q Consensus 271 ~dI~~al~~gvD~ValSfVr-sa~dv~~vr~~l~~~~~~i~IIa---KIEt------~~aveNldeIl~~-----sDgIm 335 (515)
+.++.+.+.|.|+|-+..-. ...++.++++.+++.|-.+..+. .+-+ .++++.+...++. ++.|.
T Consensus 22 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~d~~~r~~~~~~~~~~i~~a~~lG~~~v~ 101 (275)
T 3qc0_A 22 EAVDICLKHGITAIAPWRDQVAAIGLGEAGRIVRANGLKLTGLCRGGFFPAPDASGREKAIDDNRRAVDEAAELGADCLV 101 (275)
T ss_dssp HHHHHHHHTTCCEEECBHHHHHHHCHHHHHHHHHHHTCEESCEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHTTCSCEE
T ss_pred HHHHHHHHcCCCEEEeccccccccCHHHHHHHHHHcCCceEEeecCCCcCCCCHHHHHHHHHHHHHHHHHHHHhCCCEEE
Confidence 45677788999999875421 34567788889988776544332 1221 2345556665554 57777
Q ss_pred EcCCccccc-CC----CCCHHHHHHHHHHHHHhcCCcEEE
Q 010211 336 VARGDLGAE-LP----IEDVPLLQEDIIRRCRSMQKPVIV 370 (515)
Q Consensus 336 IgrgDLg~e-lg----~e~v~~aqk~Ii~~c~~aGKPviv 370 (515)
+.+|...-. .. ++.+....+++.+.|.+.|..+.+
T Consensus 102 ~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~l 141 (275)
T 3qc0_A 102 LVAGGLPGGSKNIDAARRMVVEGIAAVLPHARAAGVPLAI 141 (275)
T ss_dssp EECBCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred EeeCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 776644211 11 134666778888889999988776
No 321
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=39.78 E-value=34 Score=34.24 Aligned_cols=66 Identities=18% Similarity=0.304 Sum_probs=44.7
Q ss_pred cCeeEEcCC-----cccccCCC--CCHHHHHHHHHHHHHhcCCcEEEEeccccccccC-CCcChHHHhHHHHHHHh--CC
Q 010211 331 SDGAMVARG-----DLGAELPI--EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDH-PTPTRAEVSDIAIAVRE--GA 400 (515)
Q Consensus 331 sDgImIgrg-----DLg~elg~--e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~-~~PtrAEv~DvanaV~~--G~ 400 (515)
.|.|.+=+| ..|..... ++-++..+++.+++++..+-+++-. +. |.-+ -.|++.++.. |+
T Consensus 184 pDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vnpdvivLc-------~gGpIst---peDv~~~l~~t~G~ 253 (286)
T 2p10_A 184 ADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDDIIILS-------HGGPIAN---PEDARFILDSCQGC 253 (286)
T ss_dssp CSEEEEECSCC---------CCCHHHHHHHHHHHHHHHHHHCSCCEEEE-------ESTTCCS---HHHHHHHHHHCTTC
T ss_pred CCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhCCCcEEEe-------cCCCCCC---HHHHHHHHhcCCCc
Confidence 799998877 44444332 4557789999999999988777632 55 4443 3467777877 99
Q ss_pred cEEeec
Q 010211 401 DAVMLS 406 (515)
Q Consensus 401 D~vmLs 406 (515)
|+++..
T Consensus 254 ~G~~gA 259 (286)
T 2p10_A 254 HGFYGA 259 (286)
T ss_dssp CEEEES
T ss_pred cEEEee
Confidence 999975
No 322
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=39.71 E-value=1.2e+02 Score=30.05 Aligned_cols=94 Identities=15% Similarity=0.156 Sum_probs=52.7
Q ss_pred HHHHhh-cCeeEEcCCcc--cccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHH-HhHHHHHHHhCC
Q 010211 325 HSIISA-SDGAMVARGDL--GAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGA 400 (515)
Q Consensus 325 deIl~~-sDgImIgrgDL--g~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAE-v~DvanaV~~G~ 400 (515)
+-.++. +||+++. |=- +..+..++-..+.+.+++.++. ..||+..+ +..+-.| +...-.+-..|+
T Consensus 40 ~~li~~Gv~gl~v~-GtTGE~~~Ls~eEr~~vi~~~~~~~~g-rvpViaGv---------g~~st~~ai~la~~A~~~Ga 108 (306)
T 1o5k_A 40 RYQLENGVNALIVL-GTTGESPTVNEDEREKLVSRTLEIVDG-KIPVIVGA---------GTNSTEKTLKLVKQAEKLGA 108 (306)
T ss_dssp HHHHHTTCCEEEES-SGGGTGGGCCHHHHHHHHHHHHHHHTT-SSCEEEEC---------CCSCHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCCEEEeC-ccccchhhCCHHHHHHHHHHHHHHhCC-CCeEEEcC---------CCccHHHHHHHHHHHHhcCC
Confidence 334444 8999885 211 1222334444555555555432 47888743 4444455 445555667799
Q ss_pred cEEeecccccCCCCHHHHHHHHHHHHHHH
Q 010211 401 DAVMLSGETAHGKFPLKAVKVMHTVALRT 429 (515)
Q Consensus 401 D~vmLs~ETa~G~yPveaV~~m~~I~~~a 429 (515)
|++|+..=--...-+-+.++....|+..+
T Consensus 109 davlv~~P~y~~~s~~~l~~~f~~va~a~ 137 (306)
T 1o5k_A 109 NGVLVVTPYYNKPTQEGLYQHYKYISERT 137 (306)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHTTC
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhC
Confidence 99998632222233456677788776544
No 323
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=39.69 E-value=49 Score=31.99 Aligned_cols=65 Identities=5% Similarity=0.106 Sum_probs=39.9
Q ss_pred HHHhhcchhcCCcEEEecc------cCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh---cCeeEEcC
Q 010211 270 WEDIKFGVDNQVDFYAVSF------VKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA---SDGAMVAR 338 (515)
Q Consensus 270 ~~dI~~al~~gvD~ValSf------Vrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~---sDgImIgr 338 (515)
.+.+..+++.|+|+|++.. -.+.+...++...+...+.++.+|+ | .|+.+.+++..+ +||++||.
T Consensus 164 ~~E~~~a~~~gad~IGvn~~~l~~~~~dl~~~~~L~~~i~~~~~~~~vIA--e--gGI~s~~dv~~l~~Ga~gvlVGs 237 (254)
T 1vc4_A 164 ERELEIALEAGAEVLGINNRDLATLHINLETAPRLGRLARKRGFGGVLVA--E--SGYSRKEELKALEGLFDAVLIGT 237 (254)
T ss_dssp HHHHHHHHHHTCSEEEEESBCTTTCCBCTTHHHHHHHHHHHTTCCSEEEE--E--SCCCSHHHHHTTTTTCSEEEECH
T ss_pred HHHHHHHHHcCCCEEEEccccCcCCCCCHHHHHHHHHhCccccCCCeEEE--E--cCCCCHHHHHHHHcCCCEEEEeH
Confidence 3445677788999998843 2233334444444432222566776 3 377777777666 79999984
No 324
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=39.62 E-value=51 Score=32.67 Aligned_cols=74 Identities=14% Similarity=0.127 Sum_probs=41.2
Q ss_pred CCHhhHHH-hhcchhcCCcEEEecccC------------------CH-----HHHHHHHHHHHhcCCCceEEE--EecCh
Q 010211 265 ITDKDWED-IKFGVDNQVDFYAVSFVK------------------DA-----KVVHELKDYLKSCNADIHVIV--KIESA 318 (515)
Q Consensus 265 ltekD~~d-I~~al~~gvD~ValSfVr------------------sa-----~dv~~vr~~l~~~~~~i~IIa--KIEt~ 318 (515)
++..|... .+.+.+.|+|+|.++--. +. ..+..++..-+..+.++.||+ -|.|.
T Consensus 222 ~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ipVi~~GGI~~~ 301 (336)
T 1f76_A 222 LSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGVGGIDSV 301 (336)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSSCEEEESSCCSH
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCCCEEEECCCCCH
Confidence 45556433 456678899999886310 00 111222222222244677877 56665
Q ss_pred hhhhcHHHHHhh-cCeeEEcCCcc
Q 010211 319 DSIPNLHSIISA-SDGAMVARGDL 341 (515)
Q Consensus 319 ~aveNldeIl~~-sDgImIgrgDL 341 (515)
+-+ .+.++. +|+|++||+=|
T Consensus 302 ~da---~~~l~~GAd~V~igr~~l 322 (336)
T 1f76_A 302 IAA---REKIAAGASLVQIYSGFI 322 (336)
T ss_dssp HHH---HHHHHHTCSEEEESHHHH
T ss_pred HHH---HHHHHCCCCEEEeeHHHH
Confidence 443 333334 99999998744
No 325
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=39.52 E-value=34 Score=32.93 Aligned_cols=53 Identities=25% Similarity=0.329 Sum_probs=34.0
Q ss_pred CHHHHHHHHHhCCcEEEEecCCCC--hHHHHHHHHHHHHHHhhcCCceEEEEEecCCC
Q 010211 113 SREMIWKLAEEGMNVARLNMSHGD--HASHQKTIDLVKEYNSQFEDKAVAIMLDTKGP 168 (515)
Q Consensus 113 ~~e~i~~li~aGm~v~RiN~SHg~--~e~~~~~i~~ir~~~~~~~~~~i~I~lDL~GP 168 (515)
..+.++.|-+.|+|++|+-++.|. .+...+.++.+=+...+.| +.+++|+-+.
T Consensus 33 ~~~~~~~i~~~G~N~VRi~~~~~~~~~~~~~~~ld~~v~~a~~~G---i~Vild~H~~ 87 (294)
T 2whl_A 33 ASTAIPAIAEQGANTIRIVLSDGGQWEKDDIDTIREVIELAEQNK---MVAVVEVHDA 87 (294)
T ss_dssp HHHHHHHHHHTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHTTT---CEEEEEECTT
T ss_pred hHHHHHHHHHcCCCEEEEEecCCCccCccHHHHHHHHHHHHHHCC---CEEEEEeccC
Confidence 456899999999999999886441 1112233333334444555 7788898653
No 326
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=39.36 E-value=1.1e+02 Score=28.38 Aligned_cols=112 Identities=13% Similarity=0.131 Sum_probs=62.9
Q ss_pred CCCCHh--hHHH-hhcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEE-----------ecChhhhhcHHHHH
Q 010211 263 PSITDK--DWED-IKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVK-----------IESADSIPNLHSII 328 (515)
Q Consensus 263 p~ltek--D~~d-I~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaK-----------IEt~~aveNldeIl 328 (515)
|..+.. +... ++...+.|++++.+ .+.+.+..+++.. +++++.- |+. -.+.+++.+
T Consensus 29 p~~~~~~~~~~~~a~~~~~~G~~~i~~---~~~~~i~~i~~~~-----~~p~i~~~~~~~~~~~~~i~~--~~~~i~~~~ 98 (234)
T 1yxy_A 29 PLYSETGGIMPLMAKAAQEAGAVGIRA---NSVRDIKEIQAIT-----DLPIIGIIKKDYPPQEPFITA--TMTEVDQLA 98 (234)
T ss_dssp TTCCTTCCSHHHHHHHHHHHTCSEEEE---ESHHHHHHHHTTC-----CSCEEEECBCCCTTSCCCBSC--SHHHHHHHH
T ss_pred CCcCCccchHHHHHHHHHHCCCcEeec---CCHHHHHHHHHhC-----CCCEEeeEcCCCCccccccCC--hHHHHHHHH
Confidence 444555 5544 45556789998864 4677777776543 3444321 221 234556666
Q ss_pred hh-cCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEE
Q 010211 329 SA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSM--QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAV 403 (515)
Q Consensus 329 ~~-sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~a--GKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~v 403 (515)
+. +|.|.++-.-+.-.-+ ..+ .++++.+++. +++++.-. . |..| ...+...|+|.+
T Consensus 99 ~~Gad~V~l~~~~~~~~~~-~~~----~~~i~~i~~~~~~~~v~~~~---------~--t~~e---a~~a~~~Gad~i 157 (234)
T 1yxy_A 99 ALNIAVIAMDCTKRDRHDG-LDI----ASFIRQVKEKYPNQLLMADI---------S--TFDE---GLVAHQAGIDFV 157 (234)
T ss_dssp TTTCSEEEEECCSSCCTTC-CCH----HHHHHHHHHHCTTCEEEEEC---------S--SHHH---HHHHHHTTCSEE
T ss_pred HcCCCEEEEcccccCCCCC-ccH----HHHHHHHHHhCCCCeEEEeC---------C--CHHH---HHHHHHcCCCEE
Confidence 55 8988776322110000 122 4566777766 78877621 1 2222 457788999999
No 327
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=39.31 E-value=95 Score=30.41 Aligned_cols=96 Identities=13% Similarity=0.050 Sum_probs=53.1
Q ss_pred HHHHhh-cCeeEEc-CCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHH-HhHHHHHHHhCCc
Q 010211 325 HSIISA-SDGAMVA-RGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGAD 401 (515)
Q Consensus 325 deIl~~-sDgImIg-rgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAE-v~DvanaV~~G~D 401 (515)
+-.++. +||+++. ---=+..+..++-..+.+.+++.++. ..||+..+ +..+-.| +...-.+-..|+|
T Consensus 29 ~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g-r~pviaGv---------g~~~t~~ai~la~~a~~~Gad 98 (292)
T 2ojp_A 29 DYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADG-RIPVIAGT---------GANATAEAISLTQRFNDSGIV 98 (292)
T ss_dssp HHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-SSCEEEEC---------CCSSHHHHHHHHHHTTTSSCS
T ss_pred HHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCC-CCcEEEec---------CCccHHHHHHHHHHHHhcCCC
Confidence 334444 8999885 11111222334444555555555432 47888743 4444455 4445555667999
Q ss_pred EEeecccccCCCCHHHHHHHHHHHHHHHh
Q 010211 402 AVMLSGETAHGKFPLKAVKVMHTVALRTE 430 (515)
Q Consensus 402 ~vmLs~ETa~G~yPveaV~~m~~I~~~aE 430 (515)
++|+..=--...-+-+.++....|+..+.
T Consensus 99 avlv~~P~y~~~s~~~l~~~f~~ia~a~~ 127 (292)
T 2ojp_A 99 GCLTVTPYYNRPSQEGLYQHFKAIAEHTD 127 (292)
T ss_dssp EEEEECCCSSCCCHHHHHHHHHHHHTTCS
T ss_pred EEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 99986322222334567778888765543
No 328
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=39.21 E-value=45 Score=34.01 Aligned_cols=70 Identities=19% Similarity=0.155 Sum_probs=41.1
Q ss_pred HHhhcchhcCCcEEEecc------------cCCHHHHHHHHHH----HHhcCC-CceEEEEecChhhhhcHHHHHhh---
Q 010211 271 EDIKFGVDNQVDFYAVSF------------VKDAKVVHELKDY----LKSCNA-DIHVIVKIESADSIPNLHSIISA--- 330 (515)
Q Consensus 271 ~dI~~al~~gvD~ValSf------------Vrsa~dv~~vr~~----l~~~~~-~i~IIaKIEt~~aveNldeIl~~--- 330 (515)
++.+.+.+.|+|+|.++. +.+.+.+.++++. +.+.+. ++.||+ --||.+-.+|++.
T Consensus 223 e~a~~~~~~Gad~i~vg~Gg~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia----~GGI~~~~dv~kalal 298 (393)
T 2qr6_A 223 TTALHMMRTGAVGIIVGGGENTNSLALGMEVSMATAIADVAAARRDYLDETGGRYVHIIA----DGSIENSGDVVKAIAC 298 (393)
T ss_dssp HHHHHHHTTTCSEEEESCCSCCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEE----CSSCCSHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECCCcccccccCCCCCChHHHHHHHHHHHHHhHhhcCCcceEEEE----ECCCCCHHHHHHHHHc
Confidence 445666788999999864 2222333333333 222343 378887 1244444444443
Q ss_pred -cCeeEEcCCccccc
Q 010211 331 -SDGAMVARGDLGAE 344 (515)
Q Consensus 331 -sDgImIgrgDLg~e 344 (515)
+|++++||.=|...
T Consensus 299 GA~~V~iG~~~l~~~ 313 (393)
T 2qr6_A 299 GADAVVLGSPLARAE 313 (393)
T ss_dssp TCSEEEECGGGGGST
T ss_pred CCCEEEECHHHHcCC
Confidence 89999999866554
No 329
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A
Probab=39.00 E-value=32 Score=33.89 Aligned_cols=52 Identities=29% Similarity=0.473 Sum_probs=34.4
Q ss_pred HHHHHHHHHhCCcEEEEecCC-----CC----hH-----------HHHHHHHHHHHHHhhcCCceEEEEEecCCC
Q 010211 114 REMIWKLAEEGMNVARLNMSH-----GD----HA-----------SHQKTIDLVKEYNSQFEDKAVAIMLDTKGP 168 (515)
Q Consensus 114 ~e~i~~li~aGm~v~RiN~SH-----g~----~e-----------~~~~~i~~ir~~~~~~~~~~i~I~lDL~GP 168 (515)
.+.++.|-+.|+|++|+-++. +. .. ...+.++.+=+...+.| +.+++|+-+|
T Consensus 47 ~~~~~~~~~~G~n~vRi~~~~~~~~~~~~~~~~~~~~~np~~~g~~~~~~ld~~v~~a~~~G---i~vild~h~~ 118 (358)
T 1ece_A 47 RSMLDQIKSLGYNTIRLPYSDDILKPGTMPNSINFYQMNQDLQGLTSLQVMDKIVAYAGQIG---LRIILDRHRP 118 (358)
T ss_dssp HHHHHHHHHTTCCEEEEEEEGGGGSTTCCCCSCCCSSSCTTTTTCCHHHHHHHHHHHHHHTT---CEEEEEEEES
T ss_pred HHHHHHHHHcCCCEEEeeccHHHhcCCCCCccccccccCccccCccHHHHHHHHHHHHHHCC---CEEEEecCCC
Confidence 678999999999999999873 21 00 13344444444455556 7788888664
No 330
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=38.98 E-value=1.8e+02 Score=26.91 Aligned_cols=100 Identities=15% Similarity=0.215 Sum_probs=53.0
Q ss_pred HHhhcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEec-------ChhhhhcHHHHHhhcCeeEEcCCcccc
Q 010211 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIE-------SADSIPNLHSIISASDGAMVARGDLGA 343 (515)
Q Consensus 271 ~dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIE-------t~~aveNldeIl~~sDgImIgrgDLg~ 343 (515)
+.++.+.+.|++.+... -.+.++...+.++..+.. ++....-+= +.+.++.+++.+.....-.+|=|..|.
T Consensus 23 ~~l~~~~~~Gv~~~v~~-~~~~~~~~~~~~l~~~~~-~~~~~~G~hP~~~~~~~~~~~~~l~~~~~~~~~~~~~iGEiGl 100 (259)
T 1zzm_A 23 ASLQRAAQAGVGKIIVP-ATEAENFARVLALAENYQ-PLYAALGLHPGMLEKHSDVSLEQLQQALERRPAKVVAVGEIGL 100 (259)
T ss_dssp HHHHHHHHTTEEEEEEE-CCSGGGHHHHHHHHHHCT-TEEEEECCCGGGGGGCCHHHHHHHHHHHHHCCSSEEEEEEEEE
T ss_pred HHHHHHHHcCCCEEEEe-cCCHHHHHHHHHHHHhCC-CeEEEEEecccccccCCHHHHHHHHHHHhcCCCCEEEEEEecc
Confidence 44566778899876543 234677777777655433 333332220 112334444444321112233355565
Q ss_pred cCCCC-CHHHHH----HHHHHHHHhcCCcEEEEe
Q 010211 344 ELPIE-DVPLLQ----EDIIRRCRSMQKPVIVAT 372 (515)
Q Consensus 344 elg~e-~v~~aq----k~Ii~~c~~aGKPvivAT 372 (515)
+.... .-...| +..++.|.+.|+||++-|
T Consensus 101 d~~~~~~~~~~q~~~f~~~~~~a~~~~~Pv~iH~ 134 (259)
T 1zzm_A 101 DLFGDDPQFERQQWLLDEQLKLAKRYDLPVILHS 134 (259)
T ss_dssp ECCSSCCCHHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEe
Confidence 54321 112334 556777999999999965
No 331
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=38.77 E-value=1.3e+02 Score=29.39 Aligned_cols=94 Identities=12% Similarity=0.110 Sum_probs=52.2
Q ss_pred HHHHhh-cCeeEEcCCc--ccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHH-HhHHHHHHHhCC
Q 010211 325 HSIISA-SDGAMVARGD--LGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGA 400 (515)
Q Consensus 325 deIl~~-sDgImIgrgD--Lg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAE-v~DvanaV~~G~ 400 (515)
+-.++. +||+++. |= =+..+..++-..+.+.+++.++ -..||+..+ +..+-.| +...-.+-..|+
T Consensus 31 ~~li~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~-gr~pviaGv---------g~~~t~~ai~la~~A~~~Ga 99 (294)
T 3b4u_A 31 RRCLSNGCDSVTLF-GTTGEGCSVGSRERQAILSSFIAAGI-APSRIVTGV---------LVDSIEDAADQSAEALNAGA 99 (294)
T ss_dssp HHHHHTTCSEEEES-STTTTGGGSCHHHHHHHHHHHHHTTC-CGGGEEEEE---------CCSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEeC---------CCccHHHHHHHHHHHHhcCC
Confidence 334444 8999885 21 1112222333333333333322 136888754 3444445 555556667799
Q ss_pred cEEeecccccCC-CCHHHHHHHHHHHHHHH
Q 010211 401 DAVMLSGETAHG-KFPLKAVKVMHTVALRT 429 (515)
Q Consensus 401 D~vmLs~ETa~G-~yPveaV~~m~~I~~~a 429 (515)
|++|+..=--.. .-+-+.++....|+..+
T Consensus 100 davlv~~P~y~~~~s~~~l~~~f~~va~a~ 129 (294)
T 3b4u_A 100 RNILLAPPSYFKNVSDDGLFAWFSAVFSKI 129 (294)
T ss_dssp SEEEECCCCSSCSCCHHHHHHHHHHHHHHH
T ss_pred CEEEEcCCcCCCCCCHHHHHHHHHHHHHhc
Confidence 999986332223 34567888999998877
No 332
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=38.36 E-value=1.2e+02 Score=31.27 Aligned_cols=95 Identities=14% Similarity=0.106 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh-cCeeEEcC-CcccccCCCCCHHHHHHHHHHHHHhcCCcEE
Q 010211 292 AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVAR-GDLGAELPIEDVPLLQEDIIRRCRSMQKPVI 369 (515)
Q Consensus 292 a~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDgImIgr-gDLg~elg~e~v~~aqk~Ii~~c~~aGKPvi 369 (515)
.+++..+++.. +.+|++|.= ...+......+. +|+|.|.- |-=....|.+. ..+..++.++.. -..|||
T Consensus 241 ~~~i~~lr~~~-----~~PvivKgv--~~~e~A~~a~~aGad~I~vs~~ggr~~~~g~~~-~~~l~~v~~av~-~~ipVi 311 (392)
T 2nzl_A 241 WEDIKWLRRLT-----SLPIVAKGI--LRGDDAREAVKHGLNGILVSNHGARQLDGVPAT-IDVLPEIVEAVE-GKVEVF 311 (392)
T ss_dssp HHHHHHHC--C-----CSCEEEEEE--CCHHHHHHHHHTTCCEEEECCGGGTSSTTCCCH-HHHHHHHHHHHT-TSSEEE
T ss_pred HHHHHHHHHhh-----CCCEEEEec--CCHHHHHHHHHcCCCEEEeCCCCCCcCCCCcCh-HHHHHHHHHHcC-CCCEEE
Confidence 44555554432 466777721 123333333333 89998831 10001223222 233344444332 247888
Q ss_pred EEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecc
Q 010211 370 VATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 407 (515)
Q Consensus 370 vATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ 407 (515)
.. .+.-+ -.|+..++..|+|+||+..
T Consensus 312 a~---------GGI~~---g~Dv~kalalGAd~V~iGr 337 (392)
T 2nzl_A 312 LD---------GGVRK---GTDVLKALALGAKAVFVGR 337 (392)
T ss_dssp EC---------SSCCS---HHHHHHHHHTTCSEEEECH
T ss_pred EE---------CCCCC---HHHHHHHHHhCCCeeEECH
Confidence 73 33333 3488899999999999853
No 333
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=38.09 E-value=44 Score=34.04 Aligned_cols=65 Identities=17% Similarity=0.271 Sum_probs=38.3
Q ss_pred HHhhcchhcCCcEEEecccCC------HHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHh---h-cCeeEEcCC
Q 010211 271 EDIKFGVDNQVDFYAVSFVKD------AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIIS---A-SDGAMVARG 339 (515)
Q Consensus 271 ~dI~~al~~gvD~ValSfVrs------a~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~---~-sDgImIgrg 339 (515)
++++.+.+.|+|+|.++--.. ..++..+++..+....++.||+- -||.+-+++.+ . +|+++|||.
T Consensus 237 e~a~~a~~~Gad~I~vs~~ggr~~~~~~~~~~~l~~v~~~~~~~ipvia~----GGI~~~~D~~k~l~~GAdaV~iGr~ 311 (370)
T 1gox_A 237 EDARLAVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRIPVFLD----GGVRRGTDVFKALALGAAGVFIGRP 311 (370)
T ss_dssp HHHHHHHHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHHHTTTSSCEEEE----SSCCSHHHHHHHHHHTCSEEEECHH
T ss_pred HHHHHHHHcCCCEEEECCCCCccCCCcccHHHHHHHHHHHhCCCCEEEEE----CCCCCHHHHHHHHHcCCCEEeecHH
Confidence 556777889999999863211 12333444444434456777761 23433333333 3 899999984
No 334
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=37.71 E-value=1.6e+02 Score=29.30 Aligned_cols=95 Identities=18% Similarity=0.173 Sum_probs=55.3
Q ss_pred HHHHhh-cCeeEEcCCcc--cccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHH-HhHHHHHHHhCC
Q 010211 325 HSIISA-SDGAMVARGDL--GAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGA 400 (515)
Q Consensus 325 deIl~~-sDgImIgrgDL--g~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAE-v~DvanaV~~G~ 400 (515)
+..++. +||+++. |=- +..+..++-..+.+.+++.++. ..||+..+ +..+-.| +...-.+-..|+
T Consensus 50 ~~li~~Gv~Gl~v~-GtTGE~~~Ls~~Er~~v~~~~v~~~~g-rvpViaGv---------g~~st~~ai~la~~A~~~Ga 118 (315)
T 3si9_A 50 EWQITQGINGVSPV-GTTGESPTLTHEEHKRIIELCVEQVAK-RVPVVAGA---------GSNSTSEAVELAKHAEKAGA 118 (315)
T ss_dssp HHHHHTTCSEEECS-STTTTGGGSCHHHHHHHHHHHHHHHTT-SSCBEEEC---------CCSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCCEEEeC-ccccCccccCHHHHHHHHHHHHHHhCC-CCcEEEeC---------CCCCHHHHHHHHHHHHhcCC
Confidence 333444 8999875 211 1122223444444555554432 47888743 4444455 555566777899
Q ss_pred cEEeecccccCCCCHHHHHHHHHHHHHHHh
Q 010211 401 DAVMLSGETAHGKFPLKAVKVMHTVALRTE 430 (515)
Q Consensus 401 D~vmLs~ETa~G~yPveaV~~m~~I~~~aE 430 (515)
|++|+..=--...-+-+.++....|+..+.
T Consensus 119 davlv~~P~y~~~~~~~l~~~f~~va~a~~ 148 (315)
T 3si9_A 119 DAVLVVTPYYNRPNQRGLYTHFSSIAKAIS 148 (315)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHHHCS
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHcCC
Confidence 999986322222335678888899888774
No 335
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=37.41 E-value=1.4e+02 Score=29.65 Aligned_cols=94 Identities=14% Similarity=0.099 Sum_probs=55.0
Q ss_pred HHHHhh-cCeeEEcCCc--ccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHH-HhHHHHHHHhCC
Q 010211 325 HSIISA-SDGAMVARGD--LGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGA 400 (515)
Q Consensus 325 deIl~~-sDgImIgrgD--Lg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAE-v~DvanaV~~G~ 400 (515)
+-.++. +|||++. |= =+..+..++-..+.+.+++.++ -..||+..| +. +-.| +...-.+-..|+
T Consensus 40 ~~li~~Gv~gl~v~-GtTGE~~~Ls~eEr~~vi~~~~~~~~-grvpViaGv---------g~-st~~ai~la~~A~~~Ga 107 (314)
T 3d0c_A 40 EFLLQNGIEVIVPN-GNTGEFYALTIEEAKQVATRVTELVN-GRATVVAGI---------GY-SVDTAIELGKSAIDSGA 107 (314)
T ss_dssp HHHHHTTCSEECTT-SGGGTGGGSCHHHHHHHHHHHHHHHT-TSSEEEEEE---------CS-SHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCCEEEEC-cccCChhhCCHHHHHHHHHHHHHHhC-CCCeEEecC---------Cc-CHHHHHHHHHHHHHcCC
Confidence 334444 8999874 21 1122233444455555555543 247888754 34 4445 555556677799
Q ss_pred cEEeecccccCCCCHHHHHHHHHHHHHHHh
Q 010211 401 DAVMLSGETAHGKFPLKAVKVMHTVALRTE 430 (515)
Q Consensus 401 D~vmLs~ETa~G~yPveaV~~m~~I~~~aE 430 (515)
|++|+..=--...-+-+.++....|+..+.
T Consensus 108 davlv~~P~y~~~s~~~l~~~f~~va~a~~ 137 (314)
T 3d0c_A 108 DCVMIHQPVHPYITDAGAVEYYRNIIEALD 137 (314)
T ss_dssp SEEEECCCCCSCCCHHHHHHHHHHHHHHSS
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 999986332223335677888888887765
No 336
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=37.19 E-value=48 Score=33.42 Aligned_cols=56 Identities=7% Similarity=0.048 Sum_probs=40.0
Q ss_pred CceEEEEecChhhhhcHHHHHhh--cCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEE
Q 010211 308 DIHVIVKIESADSIPNLHSIISA--SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (515)
Q Consensus 308 ~i~IIaKIEt~~aveNldeIl~~--sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivA 371 (515)
.+.| +--|+....+.+.++++. +|+|++.++-+|- +. --.++++.|+++|.++.+.
T Consensus 242 ~iPI-~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GG------i~-~~~~i~~~A~~~gi~~~~h 299 (371)
T 2ovl_A 242 GHTI-AGGENLHTLYDFHNAVRAGSLTLPEPDVSNIGG------YT-TFRKVAALAEANNMLLTSH 299 (371)
T ss_dssp CSCE-EECTTCCSHHHHHHHHHHTCCSEECCCTTTTTS------HH-HHHHHHHHHHHTTCCEEEC
T ss_pred CCCE-EeCCCCCCHHHHHHHHHcCCCCEEeeCccccCC------HH-HHHHHHHHHHHcCCeEccc
Confidence 3554 445777777778888776 8999997655532 22 3356889999999999883
No 337
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=37.09 E-value=60 Score=32.55 Aligned_cols=56 Identities=9% Similarity=0.089 Sum_probs=38.3
Q ss_pred CceEEEEecChhhhhcHHHHHhh--cCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEE
Q 010211 308 DIHVIVKIESADSIPNLHSIISA--SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (515)
Q Consensus 308 ~i~IIaKIEt~~aveNldeIl~~--sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivA 371 (515)
.+.| +-=|+....+.+.++++. +|++++-++-.| | +- --.++++.|+++|.++.+.
T Consensus 239 ~ipI-a~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~G---G---it-~~~~i~~~A~~~g~~~~~~ 296 (370)
T 1nu5_A 239 GVAI-LADESLSSLSSAFELARDHAVDAFSLKLCNMG---G---IA-NTLKVAAVAEAAGISSYGG 296 (370)
T ss_dssp SSEE-EESTTCCSHHHHHHHHHTTCCSEEEECHHHHT---S---HH-HHHHHHHHHHHHTCEEEEC
T ss_pred CCCE-EeCCCCCCHHHHHHHHHhCCCCEEEEchhhcC---C---HH-HHHHHHHHHHHcCCcEEec
Confidence 3554 456777777777888776 899998543332 2 22 2356888999999998873
No 338
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=37.06 E-value=57 Score=31.73 Aligned_cols=33 Identities=27% Similarity=0.332 Sum_probs=23.3
Q ss_pred HHHHHhCCcEEeecccccCCCCHHHHHHHHHHHH
Q 010211 393 AIAVREGADAVMLSGETAHGKFPLKAVKVMHTVA 426 (515)
Q Consensus 393 anaV~~G~D~vmLs~ETa~G~yPveaV~~m~~I~ 426 (515)
..+...|+|.+...+|...| -+.++..-++++.
T Consensus 139 ~~a~~~Gad~I~v~G~~~~g-~~~e~~~~~~~~~ 171 (297)
T 2zbt_A 139 LRRIAEGAAMIRTKGEAGTG-NVVEAVRHARTMW 171 (297)
T ss_dssp HHHHHTTCSEEEECCCSSSC-CTHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEEcccccCc-chHHHHhhHHHHH
Confidence 35688999999999887777 3456665554443
No 339
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=37.00 E-value=2e+02 Score=28.37 Aligned_cols=94 Identities=20% Similarity=0.172 Sum_probs=54.5
Q ss_pred HHHHhh-cCeeEEcCCc--ccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHH-HhHHHHHHHhCC
Q 010211 325 HSIISA-SDGAMVARGD--LGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGA 400 (515)
Q Consensus 325 deIl~~-sDgImIgrgD--Lg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAE-v~DvanaV~~G~ 400 (515)
+-.++. +|||++. |= =+..+..++-..+.+.+++.++ -..||+..| +..+-.| +...-.+-..|+
T Consensus 36 ~~li~~Gv~gl~v~-GtTGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaGv---------g~~~t~~ai~la~~A~~~Ga 104 (309)
T 3fkr_A 36 DFMIDAGSDGLCIL-ANFSEQFAITDDERDVLTRTILEHVA-GRVPVIVTT---------SHYSTQVCAARSLRAQQLGA 104 (309)
T ss_dssp HHHHHTTCSCEEES-SGGGTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEEC---------CCSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCCEEEEC-ccccCcccCCHHHHHHHHHHHHHHhC-CCCcEEEec---------CCchHHHHHHHHHHHHHcCC
Confidence 333444 8999984 21 1122222344444444444442 247888753 4444445 555667777899
Q ss_pred cEEeecccccC----CCCHHHHHHHHHHHHHHHh
Q 010211 401 DAVMLSGETAH----GKFPLKAVKVMHTVALRTE 430 (515)
Q Consensus 401 D~vmLs~ETa~----G~yPveaV~~m~~I~~~aE 430 (515)
|++|+..= -. ..-+-+.++....|+..+.
T Consensus 105 davlv~~P-yy~~~~~~s~~~l~~~f~~va~a~~ 137 (309)
T 3fkr_A 105 AMVMAMPP-YHGATFRVPEAQIFEFYARVSDAIA 137 (309)
T ss_dssp SEEEECCS-CBTTTBCCCHHHHHHHHHHHHHHCS
T ss_pred CEEEEcCC-CCccCCCCCHHHHHHHHHHHHHhcC
Confidence 99998631 11 1225778888899988775
No 340
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=36.97 E-value=1.5e+02 Score=29.43 Aligned_cols=95 Identities=19% Similarity=0.155 Sum_probs=55.7
Q ss_pred HHHHhh-cCeeEEcCCccc--ccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHH-HhHHHHHHHhCC
Q 010211 325 HSIISA-SDGAMVARGDLG--AELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGA 400 (515)
Q Consensus 325 deIl~~-sDgImIgrgDLg--~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAE-v~DvanaV~~G~ 400 (515)
+..++. +|||++. |=-| ..+..++-..+.+.+++.++. ..||+..+ +..+-.| +...-.+-..|+
T Consensus 52 ~~li~~Gv~Gi~v~-GtTGE~~~Ls~~Er~~v~~~~v~~~~g-rvpViaGv---------g~~~t~~ai~la~~A~~~Ga 120 (315)
T 3na8_A 52 ERLIDGGVHAIAPL-GSTGEGAYLSDPEWDEVVDFTLKTVAH-RVPTIVSV---------SDLTTAKTVRRAQFAESLGA 120 (315)
T ss_dssp HHHHHTTCSEEECS-SGGGTGGGSCHHHHHHHHHHHHHHHTT-SSCBEEEC---------CCSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEec---------CCCCHHHHHHHHHHHHhcCC
Confidence 333444 8999975 2111 112223444444555554432 47888743 4444455 555566677899
Q ss_pred cEEeecccccCCCCHHHHHHHHHHHHHHHh
Q 010211 401 DAVMLSGETAHGKFPLKAVKVMHTVALRTE 430 (515)
Q Consensus 401 D~vmLs~ETa~G~yPveaV~~m~~I~~~aE 430 (515)
|++|+..=--...-+-+.++....|+..+.
T Consensus 121 davlv~~P~y~~~s~~~l~~~f~~va~a~~ 150 (315)
T 3na8_A 121 EAVMVLPISYWKLNEAEVFQHYRAVGEAIG 150 (315)
T ss_dssp SEEEECCCCSSCCCHHHHHHHHHHHHHHCS
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 999986332233346788889999988775
No 341
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A
Probab=36.36 E-value=34 Score=33.12 Aligned_cols=48 Identities=15% Similarity=0.200 Sum_probs=35.8
Q ss_pred hhcHHHHHhhcCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEec
Q 010211 321 IPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATN 373 (515)
Q Consensus 321 veNldeIl~~sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATq 373 (515)
++.+.++++.+|++.|++|=+ -++.....+.+++.+++.++|+++=.-
T Consensus 47 ~~e~~~~~~~~dalvi~~G~~-----~~~~~~~~~~~~~~a~~~~~pvVlDpv 94 (265)
T 1v8a_A 47 EEELEEMIRLADAVVINIGTL-----DSGWRRSMVKATEIANELGKPIVLDPV 94 (265)
T ss_dssp TTTHHHHHHHCSEEEEECTTC-----CHHHHHHHHHHHHHHHHHTCCEEEECT
T ss_pred HHHHHHHHHHCCEEEEEECCC-----CHHHHHHHHHHHHHHHHcCCcEEEcCc
Confidence 455778888899999987643 234455677788889999999987443
No 342
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=36.34 E-value=73 Score=32.06 Aligned_cols=56 Identities=21% Similarity=0.131 Sum_probs=38.7
Q ss_pred CceEEEEecChhh-hhcHHHHHhh--cCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEE
Q 010211 308 DIHVIVKIESADS-IPNLHSIISA--SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (515)
Q Consensus 308 ~i~IIaKIEt~~a-veNldeIl~~--sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivA 371 (515)
.+.|+ -=|+... .+.+.++++. +|+|++-++-.| | +. --.+|++.|+++|.++.+.
T Consensus 251 ~iPIa-~dE~~~~~~~~~~~~i~~~~~d~v~ik~~~~G---G---it-~~~~i~~~A~~~g~~~~~~ 309 (382)
T 1rvk_A 251 DIPVV-GPESAAGKHWHRAEWIKAGACDILRTGVNDVG---G---IT-PALKTMHLAEAFGMECEVH 309 (382)
T ss_dssp SSCEE-ECSSCSSHHHHHHHHHHTTCCSEEEECHHHHT---S---HH-HHHHHHHHHHHTTCCEEEC
T ss_pred CCCEE-EeCCccCcHHHHHHHHHcCCCCEEeeCchhcC---C---HH-HHHHHHHHHHHcCCeEeec
Confidence 45554 4677777 7778888776 899998544332 2 22 2356889999999999884
No 343
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=36.31 E-value=2.5e+02 Score=25.65 Aligned_cols=99 Identities=6% Similarity=0.041 Sum_probs=57.4
Q ss_pred HHhhcchhcCCcEEEecccC------CHHHHHHHHHHHHhcCCCceEEEE---ecC--hhhhhcHHHHHhh-----cCee
Q 010211 271 EDIKFGVDNQVDFYAVSFVK------DAKVVHELKDYLKSCNADIHVIVK---IES--ADSIPNLHSIISA-----SDGA 334 (515)
Q Consensus 271 ~dI~~al~~gvD~ValSfVr------sa~dv~~vr~~l~~~~~~i~IIaK---IEt--~~aveNldeIl~~-----sDgI 334 (515)
+.++.+.+.|.|+|-+..-. +..++.++++.+++.|-.+..+.- +.. .+..+.+...++. ++.|
T Consensus 23 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~v 102 (272)
T 2q02_A 23 AFFRLVKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEKYGLEIVTINAVYPFNQLTEEVVKKTEGLLRDAQGVGARAL 102 (272)
T ss_dssp HHHHHHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHTTCEEEEEEEETTTTSCCHHHHHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHcCCCEEEeeccccccccccccCHHHHHHHHHHcCCeEEechhhhccCCcHHHHHHHHHHHHHHHHHhCCCEE
Confidence 55677778999998876311 346678889999887665433321 111 1223334444333 5666
Q ss_pred EEcCCcccccCCCCCH-HHHHHHHHHHHHhcCCcEEE
Q 010211 335 MVARGDLGAELPIEDV-PLLQEDIIRRCRSMQKPVIV 370 (515)
Q Consensus 335 mIgrgDLg~elg~e~v-~~aqk~Ii~~c~~aGKPviv 370 (515)
.+.+|.-+- -.+..+ ....+++.+.|.++|..+.+
T Consensus 103 ~~~~g~~~~-~~~~~~~~~~l~~l~~~a~~~gv~l~~ 138 (272)
T 2q02_A 103 VLCPLNDGT-IVPPEVTVEAIKRLSDLFARYDIQGLV 138 (272)
T ss_dssp EECCCCSSB-CCCHHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred EEccCCCch-hHHHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 665553321 123445 66677777778877876554
No 344
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=36.30 E-value=2.4e+02 Score=25.30 Aligned_cols=129 Identities=16% Similarity=0.103 Sum_probs=66.5
Q ss_pred HHhhcchhcCCcEEEeccc----CCHHHHHHHHHHHHhcCCCceEE--EEecC-hhhhhcHHHHHhh-cCeeEEcCCccc
Q 010211 271 EDIKFGVDNQVDFYAVSFV----KDAKVVHELKDYLKSCNADIHVI--VKIES-ADSIPNLHSIISA-SDGAMVARGDLG 342 (515)
Q Consensus 271 ~dI~~al~~gvD~ValSfV----rsa~dv~~vr~~l~~~~~~i~II--aKIEt-~~aveNldeIl~~-sDgImIgrgDLg 342 (515)
+.++...+ |+|++=+.+- ...+.++++++. ..+..++ .|+.+ ++- -++..++. +|++.+-.+.
T Consensus 17 ~~~~~~~~-~v~~iev~~~~~~~~g~~~i~~l~~~----~~~~~i~~~l~~~di~~~--~~~~a~~~Gad~v~vh~~~-- 87 (207)
T 3ajx_A 17 ELAGKVAE-YVDIIELGTPLIKAEGLSVITAVKKA----HPDKIVFADMKTMDAGEL--EADIAFKAGADLVTVLGSA-- 87 (207)
T ss_dssp HHHHHHGG-GCSEEEECHHHHHHHCTHHHHHHHHH----STTSEEEEEEEECSCHHH--HHHHHHHTTCSEEEEETTS--
T ss_pred HHHHHhhc-cCCEEEECcHHHHhhCHHHHHHHHHh----CCCCeEEEEEEecCccHH--HHHHHHhCCCCEEEEeccC--
Confidence 34443334 7887655431 122333334332 2234455 58876 322 14555555 8999763210
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCC-CcChHHHhHHHHHHHhCCcEE-eeccccc--CCCCHHHH
Q 010211 343 AELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHP-TPTRAEVSDIAIAVREGADAV-MLSGETA--HGKFPLKA 418 (515)
Q Consensus 343 ~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~-~PtrAEv~DvanaV~~G~D~v-mLs~ETa--~G~yPvea 418 (515)
+ ....+.+++.|+++|++++++. .++ .|+ | .+..+...|+|.+ +..+-++ .|..|.+
T Consensus 88 ---~----~~~~~~~~~~~~~~g~~~gv~~-------~s~~~p~--~--~~~~~~~~g~d~v~~~~~~~~~~~g~~~~~- 148 (207)
T 3ajx_A 88 ---D----DSTIAGAVKAAQAHNKGVVVDL-------IGIEDKA--T--RAQEVRALGAKFVEMHAGLDEQAKPGFDLN- 148 (207)
T ss_dssp ---C----HHHHHHHHHHHHHHTCEEEEEC-------TTCSSHH--H--HHHHHHHTTCSEEEEECCHHHHTSTTCCTH-
T ss_pred ---C----hHHHHHHHHHHHHcCCceEEEE-------ecCCChH--H--HHHHHHHhCCCEEEEEecccccccCCCchH-
Confidence 1 1234577788888999987632 122 222 3 1112234589999 6555543 5655665
Q ss_pred HHHHHHHHHH
Q 010211 419 VKVMHTVALR 428 (515)
Q Consensus 419 V~~m~~I~~~ 428 (515)
+.+++++..
T Consensus 149 -~~i~~~~~~ 157 (207)
T 3ajx_A 149 -GLLAAGEKA 157 (207)
T ss_dssp -HHHHHHHHH
T ss_pred -HHHHHhhCC
Confidence 555655543
No 345
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=36.26 E-value=52 Score=34.05 Aligned_cols=65 Identities=11% Similarity=0.091 Sum_probs=41.7
Q ss_pred CeEEEEecCCCCCCHH----HHHHHHHhCCcEEEEecCCCCh---HHHHHHHHHHHHHHhhcCCceEEEEEecC
Q 010211 100 KTKIVCTIGPSTSSRE----MIWKLAEEGMNVARLNMSHGDH---ASHQKTIDLVKEYNSQFEDKAVAIMLDTK 166 (515)
Q Consensus 100 ~TKIi~TiGPss~~~e----~i~~li~aGm~v~RiN~SHg~~---e~~~~~i~~ir~~~~~~~~~~i~I~lDL~ 166 (515)
+..+-+|.... .+++ ..+++.+.|.+.+.|++.||.. ...+.-++.++.+.+..| ..+.|++|.-
T Consensus 167 ~v~~y~s~~~~-~~~e~~~~~a~~~~~~Gf~~iKik~g~gp~dg~~~~~~die~v~avReavG-~d~~L~vDaN 238 (412)
T 3stp_A 167 RIPVYYSKLYA-GSIEAMQKEAEEAMKGGYKAFKSRFGYGPKDGMPGMRENLKRVEAVREVIG-YDNDLMLECY 238 (412)
T ss_dssp SEEEEEECCCS-CCHHHHHHHHHHHHTTTCSEEEEECCCCGGGHHHHHHHHHHHHHHHHHHHC-SSSEEEEECT
T ss_pred eEEEEEEecCC-CCHHHHHHHHHHHHHcCCCEEEEecccCcccccchHHHHHHHHHHHHHHcC-CCCeEEEECC
Confidence 45566664332 2444 4455777899999999999732 234555666666666676 5567777753
No 346
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=36.02 E-value=3.2e+02 Score=27.72 Aligned_cols=25 Identities=12% Similarity=0.096 Sum_probs=18.2
Q ss_pred CCCHhhHHHh--------hcchhcCCcEEEecc
Q 010211 264 SITDKDWEDI--------KFGVDNQVDFYAVSF 288 (515)
Q Consensus 264 ~ltekD~~dI--------~~al~~gvD~ValSf 288 (515)
.||..|++.+ +.+.+.|+|+|=+-.
T Consensus 142 ~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~ 174 (362)
T 4ab4_A 142 ALETEEINDIVEAYRSGAENAKAAGFDGVEIHG 174 (362)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECC
Confidence 5788888776 234678999987743
No 347
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=35.99 E-value=81 Score=29.65 Aligned_cols=98 Identities=12% Similarity=-0.127 Sum_probs=57.2
Q ss_pred HHhhcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEe------cChhhhhcHHHHHhh-----cCeeEEcC-
Q 010211 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKI------ESADSIPNLHSIISA-----SDGAMVAR- 338 (515)
Q Consensus 271 ~dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKI------Et~~aveNldeIl~~-----sDgImIgr- 338 (515)
+.++.+.+.|+|+|-+...- . ++.++++.+++.|-.+..+.-- ...++++.+...++. ++.+.+.+
T Consensus 35 ~~l~~~~~~G~~~vEl~~~~-~-~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~v~~~~~ 112 (301)
T 3cny_A 35 QLLSDIVVAGFQGTEVGGFF-P-GPEKLNYELKLRNLEIAGQWFSSYIIRDGIEKASEAFEKHCQYLKAINAPVAVVSEQ 112 (301)
T ss_dssp HHHHHHHHHTCCEECCCTTC-C-CHHHHHHHHHHTTCEECEEEEEECHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred HHHHHHHHhCCCEEEecCCC-C-CHHHHHHHHHHCCCeEEEEeccCCCChhhHHHHHHHHHHHHHHHHHcCCCEEEecCC
Confidence 45677778899998776322 2 6788899998877654443110 012344555555544 56666654
Q ss_pred -----CcccccC----------CCCCHHHHHHHHHHHHHhcCCcEEE
Q 010211 339 -----GDLGAEL----------PIEDVPLLQEDIIRRCRSMQKPVIV 370 (515)
Q Consensus 339 -----gDLg~el----------g~e~v~~aqk~Ii~~c~~aGKPviv 370 (515)
|.....+ .++.+....+++.+.|.++|..+.+
T Consensus 113 ~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~l 159 (301)
T 3cny_A 113 TYTIQRSDTANIFKDKPYFTDKEWDEVCKGLNHYGEIAAKYGLKVAY 159 (301)
T ss_dssp TTCCTTCSSCCTTTCCCCCCHHHHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CccccCcccCCcccccccCcHHHHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 3221111 1124556667888888888887665
No 348
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A
Probab=35.78 E-value=57 Score=31.83 Aligned_cols=52 Identities=21% Similarity=0.328 Sum_probs=33.1
Q ss_pred CCHHHHHHHHHhCCcEEEEecCCC---------Ch-HHHHHHHHHHHHHHhhcCCceEEEEEecC
Q 010211 112 SSREMIWKLAEEGMNVARLNMSHG---------DH-ASHQKTIDLVKEYNSQFEDKAVAIMLDTK 166 (515)
Q Consensus 112 ~~~e~i~~li~aGm~v~RiN~SHg---------~~-e~~~~~i~~ir~~~~~~~~~~i~I~lDL~ 166 (515)
.+.+.++.|-+.|+|++||-++.. .. +...+.++.+=+...+.| +.+++|+-
T Consensus 29 ~~~~d~~~i~~~G~n~vRi~i~~~~~~~~~~~g~~~~~~~~~l~~~v~~a~~~G---i~vildlh 90 (343)
T 1ceo_A 29 ITEKDIETIAEAGFDHVRLPFDYPIIESDDNVGEYKEDGLSYIDRCLEWCKKYN---LGLVLDMH 90 (343)
T ss_dssp SCHHHHHHHHHHTCCEEEEEEEGGGTBCSSSTTCBCHHHHHHHHHHHHHHHHTT---CEEEEEEE
T ss_pred cCHHHHHHHHHcCCCEEEecCCHHHhccccCCCcccHHHHHHHHHHHHHHHHCC---CEEEEEec
Confidence 357889999999999999986521 11 223333444444445555 67777764
No 349
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=35.78 E-value=81 Score=34.45 Aligned_cols=23 Identities=22% Similarity=0.440 Sum_probs=17.0
Q ss_pred CCCHhhHHHh--------hcchhcCCcEEEe
Q 010211 264 SITDKDWEDI--------KFGVDNQVDFYAV 286 (515)
Q Consensus 264 ~ltekD~~dI--------~~al~~gvD~Val 286 (515)
.||..|++.+ +.+.+.|+|+|=+
T Consensus 145 ~~t~~ei~~~i~~f~~aA~~a~~aGfDgVei 175 (690)
T 3k30_A 145 AMTKQDIDDLRRWHRNAVRRSIEAGYDIVYV 175 (690)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 5788888666 2345679999877
No 350
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=35.67 E-value=1.2e+02 Score=28.66 Aligned_cols=66 Identities=15% Similarity=0.237 Sum_probs=45.4
Q ss_pred HHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhhcCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEe
Q 010211 296 HELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVAT 372 (515)
Q Consensus 296 ~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivAT 372 (515)
..+.+.+.+.|..+.+.+.-+... -+|+++++.-.|.|+.+-++ +.....+.+.|++.|+|++.+.
T Consensus 88 ~~~~~~l~~~np~~~v~~~~~~~~-~~~~~~~~~~~DvVi~~~d~----------~~~~~~l~~~~~~~~~p~i~~~ 153 (249)
T 1jw9_B 88 ESARDALTRINPHIAITPVNALLD-DAELAALIAEHDLVLDCTDN----------VAVRNQLNAGCFAAKVPLVSGA 153 (249)
T ss_dssp HHHHHHHHHHCTTSEEEEECSCCC-HHHHHHHHHTSSEEEECCSS----------HHHHHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHHHCCCcEEEEEeccCC-HhHHHHHHhCCCEEEEeCCC----------HHHHHHHHHHHHHcCCCEEEee
Confidence 345566666677776655433333 25788888889999887322 3467788899999999998753
No 351
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=35.25 E-value=42 Score=31.37 Aligned_cols=49 Identities=14% Similarity=0.225 Sum_probs=33.1
Q ss_pred HHHHHHHHHhCCcEEEEecC-CC----------------ChHHHHHHHHHHHHHHhhcCCceEEEEEec
Q 010211 114 REMIWKLAEEGMNVARLNMS-HG----------------DHASHQKTIDLVKEYNSQFEDKAVAIMLDT 165 (515)
Q Consensus 114 ~e~i~~li~aGm~v~RiN~S-Hg----------------~~e~~~~~i~~ir~~~~~~~~~~i~I~lDL 165 (515)
.+.|+.|-+.|+|+.|+=++ ++ ..+.|.+.++.+=++.++.| +-+++|+
T Consensus 45 ~~~l~~~k~~G~N~vRv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~a~~~G---i~vil~~ 110 (351)
T 3vup_A 45 EPEFKKLHDAGGNSMRLWIHIQGETTPAFNDQGFVTGPDKQGTMLDDMKDLLDTAKKYN---ILVFPCL 110 (351)
T ss_dssp HHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEEESCSSSCHHHHHHHHHHHHHHTT---CEEEEEE
T ss_pred HHHHHHHHHcCCcEEEECcccccccCcccccccccccccccHHHHHHHHHHHHHHHHCC---CeEEEEe
Confidence 34688899999999998431 11 11356666666666777777 6677776
No 352
>2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A*
Probab=35.22 E-value=77 Score=31.77 Aligned_cols=54 Identities=20% Similarity=0.318 Sum_probs=34.7
Q ss_pred CCHHHHHHHHHhCCcEEEEecCCCC---h-------HHHHHHHHHHHHHHhhcCCceEEEEEecCCC
Q 010211 112 SSREMIWKLAEEGMNVARLNMSHGD---H-------ASHQKTIDLVKEYNSQFEDKAVAIMLDTKGP 168 (515)
Q Consensus 112 ~~~e~i~~li~aGm~v~RiN~SHg~---~-------e~~~~~i~~ir~~~~~~~~~~i~I~lDL~GP 168 (515)
...+.++.|-+.|+|++||-++... + +...+.++.+=+...+.| +.+++|+-..
T Consensus 70 ~~~~d~~~l~~~G~n~vRl~i~w~~~~~~~~~~~~~~~~l~~~d~~v~~a~~~G---i~vild~h~~ 133 (395)
T 2jep_A 70 VTPELIKKVKAAGFKSIRIPVSYLNNIGSAPNYTINAAWLNRIQQVVDYAYNEG---LYVIINIHGD 133 (395)
T ss_dssp CCHHHHHHHHHTTCCEEEECCCCGGGBCCTTTCCBCHHHHHHHHHHHHHHHTTT---CEEEECCCGG
T ss_pred CcHHHHHHHHHcCCCEEEEeeeeccccCCCCCCccCHHHHHHHHHHHHHHHHCC---CEEEEECCCc
Confidence 3678999999999999999876421 1 122333333333334444 7888998753
No 353
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=35.07 E-value=1.1e+02 Score=30.43 Aligned_cols=66 Identities=14% Similarity=0.210 Sum_probs=47.3
Q ss_pred HHHHHHHHhcCCCceEEEEecChhhhhcHHHHHh-----------hcCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhc
Q 010211 296 HELKDYLKSCNADIHVIVKIESADSIPNLHSIIS-----------ASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSM 364 (515)
Q Consensus 296 ~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~-----------~sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~a 364 (515)
..+++.+.+.|.++.|.+.-+.....+|+++++. -.|.|+-+ . +-+.....|-++|.++
T Consensus 92 ~aa~~~L~~iNP~v~v~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~---------~-Dn~~~R~~in~~c~~~ 161 (292)
T 3h8v_A 92 QAAEHTLRNINPDVLFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSC---------V-DNFEARMTINTACNEL 161 (292)
T ss_dssp HHHHHHHHHHCTTSEEEEECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEEC---------C-SSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCcEEEEecccCCcHHHHHHHhhhhcccccccCCCCCEEEEC---------C-cchhhhhHHHHHHHHh
Confidence 3466777888999988887777766788888763 24555433 1 3345667889999999
Q ss_pred CCcEEEE
Q 010211 365 QKPVIVA 371 (515)
Q Consensus 365 GKPvivA 371 (515)
|+|.+.+
T Consensus 162 ~~Pli~~ 168 (292)
T 3h8v_A 162 GQTWMES 168 (292)
T ss_dssp TCCEEEE
T ss_pred CCCEEEe
Confidence 9998864
No 354
>1ko7_A HPR kinase/phosphatase; protein kinase, phosphotransfer, protein phosphatase, dual activity, product, substrate, transferase, hydrolase; 1.95A {Staphylococcus xylosus} SCOP: c.98.2.1 c.91.1.2
Probab=35.05 E-value=43 Score=33.72 Aligned_cols=87 Identities=16% Similarity=0.281 Sum_probs=59.2
Q ss_pred CCceEEEEecCh--------hhhhcHHHHHhh-cCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccc
Q 010211 307 ADIHVIVKIESA--------DSIPNLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLES 377 (515)
Q Consensus 307 ~~i~IIaKIEt~--------~aveNldeIl~~-sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeS 377 (515)
+.++++++.|+. .-.+.++.++.. .-+|++.|||+- -+.+++.|++.|.|+.. |
T Consensus 48 ~RVQi~Gn~E~~yL~~L~~e~~~~rler~l~~~~P~IIltrg~~~-----------peelie~A~~~~IPVL~-T----- 110 (314)
T 1ko7_A 48 DRIQLLGTTELSFYNLLPDEERKGRMRKLCRPETPAIIVTRDLEP-----------PEELIEAAKEHETPLIT-S----- 110 (314)
T ss_dssp TSEEEECHHHHHHHHHSCHHHHTTHHHHHCCTTCCCEEECTTCCC-----------CHHHHHHHHHTTCCEEE-C-----
T ss_pred ccEEEEechhHHHHHhcCHHHHHHHHHHHhcCCCCEEEEeCCCCC-----------CHHHHHHHHHCCCeEEE-E-----
Confidence 367777766651 222344555543 579999999984 23478899999999886 2
Q ss_pred cccCCCcChHHHhHHHHHHHh---------------CCcEEeecccccCCCC
Q 010211 378 MIDHPTPTRAEVSDIAIAVRE---------------GADAVMLSGETAHGKF 414 (515)
Q Consensus 378 Mi~~~~PtrAEv~DvanaV~~---------------G~D~vmLs~ETa~G~y 414 (515)
+.+|-.-+..+.+++.. +--++++.|++-.||=
T Consensus 111 ----~~~ts~~~~~l~~~l~~~~~~~~~~H~~~v~~~g~~vl~~G~sG~GKS 158 (314)
T 1ko7_A 111 ----KIATTQLMSRLTTFLEHELARTTSLHGVLVDVYGVGVLITGDSGIGKS 158 (314)
T ss_dssp ----CSCHHHHHHHHHHHHHHHTCEEEEEESEEEEETTEEEEEEESTTSSHH
T ss_pred ----CCchhHHHHHHHHHHHHhhccceeeeEEEEEECCEEEEEEeCCCCCHH
Confidence 34444446667777765 2358999999999993
No 355
>3s1x_A Probable transaldolase; alpha-beta barrel, conformational selection, domain swapping transferase; HET: I22; 1.65A {Thermoplasma acidophilum} PDB: 3s1u_A* 3s1v_A* 3s0c_A* 3s1w_A*
Probab=34.91 E-value=52 Score=31.70 Aligned_cols=66 Identities=15% Similarity=0.238 Sum_probs=46.9
Q ss_pred cchhcCCcEEEecccCCHHH--------HHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh----cCeeEEcCCccc
Q 010211 275 FGVDNQVDFYAVSFVKDAKV--------VHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA----SDGAMVARGDLG 342 (515)
Q Consensus 275 ~al~~gvD~ValSfVrsa~d--------v~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~----sDgImIgrgDLg 342 (515)
.|.+.|+++|+ |||.+-.| +.++.++++..+.++.|++ .++.|..+|.+. +|.+-|.+.-|.
T Consensus 120 ~Aa~AGa~yIS-PfvgRi~d~g~dG~~~v~~i~~~~~~~~~~T~Ila-----AS~Rn~~~v~~aa~~G~d~~Tip~~vl~ 193 (223)
T 3s1x_A 120 LAAKAGVTYVS-PFVGRLDDIGEDGMQIIDMIRTIFNNYIIKTQILV-----ASIRNPIHVLRSAVIGADVVTVPFNVLK 193 (223)
T ss_dssp HHHHTTCSEEE-EBSHHHHHTTSCTHHHHHHHHHHHHHTTCCSEEEE-----BSCCSHHHHHHHHHHTCSEEEECHHHHH
T ss_pred HHHHcCCeEEE-eecchHhhcCCCHHHHHHHHHHHHHHcCCCCEEEE-----EeCCCHHHHHHHHHcCCCEEEeCHHHHH
Confidence 35678999986 79987766 4456777887777888876 467888888763 788888765554
Q ss_pred ccCC
Q 010211 343 AELP 346 (515)
Q Consensus 343 ~elg 346 (515)
-=+.
T Consensus 194 ~l~~ 197 (223)
T 3s1x_A 194 SLMK 197 (223)
T ss_dssp HTTC
T ss_pred HHHc
Confidence 4333
No 356
>3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A*
Probab=34.87 E-value=57 Score=31.43 Aligned_cols=52 Identities=15% Similarity=0.190 Sum_probs=32.9
Q ss_pred CHHHHHHHHHhCCcEEEEecCCC---------Ch-HHHHHHHHHHHHHHhhcCCceEEEEEecCC
Q 010211 113 SREMIWKLAEEGMNVARLNMSHG---------DH-ASHQKTIDLVKEYNSQFEDKAVAIMLDTKG 167 (515)
Q Consensus 113 ~~e~i~~li~aGm~v~RiN~SHg---------~~-e~~~~~i~~ir~~~~~~~~~~i~I~lDL~G 167 (515)
+.+.++.|.+.|+|.+|+-++.. .. +...+.++.+=+...+.| +.+++|+-+
T Consensus 35 ~~~d~~~l~~~G~n~vR~~i~w~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~G---i~vild~h~ 96 (317)
T 3aof_A 35 KDEFFDIIKEAGFSHVRIPIRWSTHAYAFPPYKIMDRFFKRVDEVINGALKRG---LAVVINIHH 96 (317)
T ss_dssp CTHHHHHHHHHTCSEEEECCCGGGGBCSSTTCCBCHHHHHHHHHHHHHHHHTT---CEEEEECCC
T ss_pred CHHHHHHHHHcCCCEEEEeccHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHCC---CEEEEEecC
Confidence 56789999999999999986621 10 222333333333444555 677888854
No 357
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=34.71 E-value=74 Score=31.83 Aligned_cols=46 Identities=17% Similarity=0.276 Sum_probs=33.7
Q ss_pred HHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHhhcCCceEEEEEec
Q 010211 116 MIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDT 165 (515)
Q Consensus 116 ~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~~~~~~~~~~i~I~lDL 165 (515)
..+++.+.|.+.+.+++.|++.+.-.+.++.+|++ .| ..+.|++|.
T Consensus 147 ~a~~~~~~Gf~~iKik~g~~~~~~d~~~v~avr~a---~g-~~~~l~vDa 192 (366)
T 1tkk_A 147 DAENYLKQGFQTLKIKVGKDDIATDIARIQEIRKR---VG-SAVKLRLDA 192 (366)
T ss_dssp HHHHHHHHTCCEEEEECCSSCHHHHHHHHHHHHHH---HC-SSSEEEEEC
T ss_pred HHHHHHHcCCCeEEEEeCCCCHHHHHHHHHHHHHH---hC-CCCeEEEEC
Confidence 34567889999999999998777667777777764 44 345566664
No 358
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=34.49 E-value=2.2e+02 Score=27.86 Aligned_cols=87 Identities=15% Similarity=0.192 Sum_probs=56.3
Q ss_pred HHHHHHhcCC-CceEEEEecChhhhhcHHHHHhh-cCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccc
Q 010211 298 LKDYLKSCNA-DIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNML 375 (515)
Q Consensus 298 vr~~l~~~~~-~i~IIaKIEt~~aveNldeIl~~-sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmL 375 (515)
+++.|.. |+ .+.+++.+.+++-++. .... .|.+++..-|- + .+...+. ..+..+...|+++++=+
T Consensus 30 ~k~~l~~-G~~~~gl~~~~~~p~~~e~---a~~~GaD~v~lDlEh~----~-~~~~~~~-~~l~a~~~~~~~~~VRv--- 96 (287)
T 2v5j_A 30 FKAALKA-GRPQIGLWLGLSSSYSAEL---LAGAGFDWLLIDGEHA----P-NNVQTVL-TQLQAIAPYPSQPVVRP--- 96 (287)
T ss_dssp HHHHHHT-TCCEEEEEECSCCHHHHHH---HHTSCCSEEEEESSSS----S-CCHHHHH-HHHHHHTTSSSEEEEEC---
T ss_pred HHHHHHC-CCcEEEEEEECCCHHHHHH---HHhCCCCEEEEeCCCc----c-chHHHHH-HHHHHHHhcCCCEEEEE---
Confidence 5666654 44 5778899988876633 2333 89999987774 2 2223333 23456666789988833
Q ss_pred cccccCCCcChHHHhHHHHHHHhCCcEEeec
Q 010211 376 ESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (515)
Q Consensus 376 eSMi~~~~PtrAEv~DvanaV~~G~D~vmLs 406 (515)
+..+.. |+..++..|+|+||+.
T Consensus 97 ------~~~d~~---di~~~ld~ga~~ImlP 118 (287)
T 2v5j_A 97 ------SWNDPV---QIKQLLDVGTQTLLVP 118 (287)
T ss_dssp ------SSSCHH---HHHHHHHTTCCEEEES
T ss_pred ------CCCCHH---HHHHHHhCCCCEEEeC
Confidence 333332 6777788899999996
No 359
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=34.46 E-value=93 Score=31.57 Aligned_cols=116 Identities=16% Similarity=0.278 Sum_probs=76.0
Q ss_pred CCceEEEEecChhhhhcHHHHHhh-cCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcE----EEEecccc-cccc
Q 010211 307 ADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPV----IVATNMLE-SMID 380 (515)
Q Consensus 307 ~~i~IIaKIEt~~aveNldeIl~~-sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPv----ivATqmLe-SMi~ 380 (515)
.+++|+.........+.+.+-+.. ..-+|+.-. ++++++=...-+++++.|++.|..| +.-.. .| ....
T Consensus 74 ~~VPValHlDHg~~~e~i~~ai~~GFtSVMiDgS----~~p~eENi~~Tk~vv~~ah~~gvsVEaELG~vgg-~Ed~v~~ 148 (323)
T 2isw_A 74 PDIPICIHLDHGDTLESVKMAIDLGFSSVMIDAS----HHPFDENVRITKEVVAYAHARSVSVEAELGTLGG-IEEDVQN 148 (323)
T ss_dssp TTSCEEEEEEEECSHHHHHHHHHTTCSEEEECCT----TSCHHHHHHHHHHHHHHHHTTTCEEEEEESCC----------
T ss_pred CCCcEEEECCCCCCHHHHHHHHHcCCCeEEecCC----CCCHHHHHHHHHHHHHHHHHcCCeEEEEeCCccC-CccCccc
Confidence 568899999888777666666665 788998633 4578888888899999999999888 22111 11 0000
Q ss_pred CCCcChHHHhHHHHHH-HhCCcEEeecccccCCCCH--HHH-----HHHHHHHHHHH
Q 010211 381 HPTPTRAEVSDIAIAV-REGADAVMLSGETAHGKFP--LKA-----VKVMHTVALRT 429 (515)
Q Consensus 381 ~~~PtrAEv~DvanaV-~~G~D~vmLs~ETa~G~yP--vea-----V~~m~~I~~~a 429 (515)
...-|. -.+...++ .-|+|++-.+--|+.|.|+ -+. ...|.+|-...
T Consensus 149 ~~~yTd--Peea~~Fv~~TgvD~LAvaiGt~HG~Yk~~~~p~~~L~~~~L~~I~~~~ 203 (323)
T 2isw_A 149 TVQLTE--PQDAKKFVELTGVDALAVAIGTSHGAYKFKSESDIRLAIDRVKTISDLT 203 (323)
T ss_dssp -CCCCC--HHHHHHHHHHHCCSEEEECSSCCSSSBCCCC----CCCCHHHHHHHHHH
T ss_pred ccccCC--HHHHHHHHHHHCCCEEEEecCccccccCCCCCcccccCHHHHHHHHHHh
Confidence 001111 22344556 4799999999999999997 332 25677776665
No 360
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=34.31 E-value=1.9e+02 Score=29.93 Aligned_cols=61 Identities=13% Similarity=0.315 Sum_probs=37.2
Q ss_pred HHHHhh-cCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHh-CC-c
Q 010211 325 HSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVRE-GA-D 401 (515)
Q Consensus 325 deIl~~-sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~-G~-D 401 (515)
|.+.+. +|.+=||-+|+. .+ .+++++.+.||||++.| +.-|-.|+...++++.. |. +
T Consensus 128 d~l~~~~vd~~KIgS~~~~------N~-----pLL~~va~~gKPViLSt---------GmaTl~Ei~~Ave~i~~~Gn~~ 187 (385)
T 1vli_A 128 DLLQSTSPSAFKIASYEIN------HL-----PLLKYVARLNRPMIFST---------AGAEISDVHEAWRTIRAEGNNQ 187 (385)
T ss_dssp HHHHTTCCSCEEECGGGTT------CH-----HHHHHHHTTCSCEEEEC---------TTCCHHHHHHHHHHHHTTTCCC
T ss_pred HHHHhcCCCEEEECccccc------CH-----HHHHHHHhcCCeEEEEC---------CCCCHHHHHHHHHHHHHCCCCc
Confidence 333334 567777766652 22 23455666788888865 44477787777777764 54 5
Q ss_pred EEee
Q 010211 402 AVML 405 (515)
Q Consensus 402 ~vmL 405 (515)
.++|
T Consensus 188 iiLl 191 (385)
T 1vli_A 188 IAIM 191 (385)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5555
No 361
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=34.29 E-value=51 Score=33.68 Aligned_cols=65 Identities=14% Similarity=0.161 Sum_probs=38.8
Q ss_pred HHhhcchhcCCcEEEeccc--C----CHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh----cCeeEEcCC
Q 010211 271 EDIKFGVDNQVDFYAVSFV--K----DAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA----SDGAMVARG 339 (515)
Q Consensus 271 ~dI~~al~~gvD~ValSfV--r----sa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~----sDgImIgrg 339 (515)
++.+.+.+.|+|+|.+|-- + ...++..+.+..+..+.++.||+- -||.+-.++++. +|+++|||.
T Consensus 241 e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~v~~~ipVia~----GGI~~g~D~~kalalGAd~V~iGr~ 315 (368)
T 2nli_A 241 EDADMAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAERVNKRVPIVFD----SGVRRGEHVAKALASGADVVALGRP 315 (368)
T ss_dssp HHHHHHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHHHHHTTSSCEEEC----SSCCSHHHHHHHHHTTCSEEEECHH
T ss_pred HHHHHHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHHHHhCCCCeEEEE----CCCCCHHHHHHHHHcCCCEEEECHH
Confidence 4566777899999998631 0 112333333333333456778762 355555555554 899999984
No 362
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=34.03 E-value=37 Score=34.91 Aligned_cols=46 Identities=13% Similarity=0.243 Sum_probs=36.1
Q ss_pred EecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHH
Q 010211 105 CTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEY 150 (515)
Q Consensus 105 ~TiGPss~~~e~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~~ 150 (515)
+.+|-.....+.++.++++|+++.=++.+||..+...+.|+.+|+.
T Consensus 93 ~~~g~~~~~~e~~~~a~~aGvdvI~id~a~G~~~~~~e~I~~ir~~ 138 (361)
T 3r2g_A 93 VSVGCTENELQRAEALRDAGADFFCVDVAHAHAKYVGKTLKSLRQL 138 (361)
T ss_dssp EEECSSHHHHHHHHHHHHTTCCEEEEECSCCSSHHHHHHHHHHHHH
T ss_pred EEcCCCHHHHHHHHHHHHcCCCEEEEeCCCCCcHhHHHHHHHHHHh
Confidence 3445444567899999999999999999999887666777777764
No 363
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=33.99 E-value=2.8e+02 Score=25.44 Aligned_cols=88 Identities=10% Similarity=0.013 Sum_probs=57.2
Q ss_pred HHhhcchhcCCcEEEeccc---------------CCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh-----
Q 010211 271 EDIKFGVDNQVDFYAVSFV---------------KDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA----- 330 (515)
Q Consensus 271 ~dI~~al~~gvD~ValSfV---------------rsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~----- 330 (515)
+.++.+.+.|.|+|-+... -+.+++.++++.+++.|-.+..+.-- .....+.++..++.
T Consensus 26 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~-~~~~~~~~~~~i~~A~~lG 104 (262)
T 3p6l_A 26 EALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIVGTGVY-VAEKSSDWEKMFKFAKAMD 104 (262)
T ss_dssp HHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTCEEEEEEEE-CCSSTTHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCCeEEEEecc-CCccHHHHHHHHHHHHHcC
Confidence 4567777889999987642 34678899999999887665443321 11234444444443
Q ss_pred cCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEE
Q 010211 331 SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIV 370 (515)
Q Consensus 331 sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPviv 370 (515)
++.|.+.+|. + ..+++.+.|+++|..+.+
T Consensus 105 a~~v~~~~~~-------~----~~~~l~~~a~~~gv~l~~ 133 (262)
T 3p6l_A 105 LEFITCEPAL-------S----DWDLVEKLSKQYNIKISV 133 (262)
T ss_dssp CSEEEECCCG-------G----GHHHHHHHHHHHTCEEEE
T ss_pred CCEEEecCCH-------H----HHHHHHHHHHHhCCEEEE
Confidence 5777776652 2 236788888888887665
No 364
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=33.96 E-value=80 Score=30.63 Aligned_cols=29 Identities=14% Similarity=0.037 Sum_probs=23.6
Q ss_pred CeEEEEecCCCCCCHHHHHHHHHhCCcEEEEec
Q 010211 100 KTKIVCTIGPSTSSREMIWKLAEEGMNVARLNM 132 (515)
Q Consensus 100 ~TKIi~TiGPss~~~e~i~~li~aGm~v~RiN~ 132 (515)
+..+|+.+.| .+..+.+.++|++.+=++.
T Consensus 21 ~~~~i~~~~~----~~~a~~~~~~Ga~~i~~~e 49 (297)
T 2zbt_A 21 KGGVIMDVTT----PEQAVIAEEAGAVAVMALE 49 (297)
T ss_dssp TTEEEEEESS----HHHHHHHHHHTCSEEEECS
T ss_pred hCCeeeeech----HHHHHHHHHCCCcEEEecc
Confidence 5677877766 7899999999999887754
No 365
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=33.90 E-value=32 Score=30.68 Aligned_cols=57 Identities=19% Similarity=0.281 Sum_probs=40.4
Q ss_pred EEecCCEEEEEeec--CCC---CcceEEeccccccc---ccCcCCEEEEeCCeeEEEEEEEeCCeEE
Q 010211 180 ILKEGQEFNFTIKR--GVS---TEDTVSVNYDDFVN---DVEVGDILLVDGGMMSLAVKSKTKDLVK 238 (515)
Q Consensus 180 ~L~~G~~v~lt~~~--~~~---~~~~i~v~~~~l~~---~v~~Gd~IliDDG~I~l~V~~~~~~~v~ 238 (515)
-++.|++.+|+... .+| .+....++...|.. .+++|+.+.+.+ ....|++++++.|.
T Consensus 64 gm~~Ge~~~v~ipp~~aYG~~~~~~v~~v~~~~f~~~~~~~~~G~~~~~~~--~~~~V~~v~~~~v~ 128 (151)
T 1ix5_A 64 DMEVGDEKTVKIPAEKAYGNRNEMLIQKIPRDAFKEADFEPEEGMVILAEG--IPATITEVTDNEVT 128 (151)
T ss_dssp TCCTTCCCEEEECTTTSSCSCCSTTBCCEETHHHHTSTTCCCTTEEEESSS--CEEEEEEEETTEEE
T ss_pred CCCCCCEEEEEECcHHHCCCCCccEEEEEEHHHcCccCCcccccCEEEECC--eEEEEEEEcCCEEE
Confidence 46788888887652 233 23344555556654 589999999887 77789999998865
No 366
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=33.81 E-value=63 Score=31.65 Aligned_cols=63 Identities=14% Similarity=0.170 Sum_probs=45.4
Q ss_pred HHhhcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEE--EecChhhhhcHHHHHhh-cCeeEEcC
Q 010211 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIV--KIESADSIPNLHSIISA-SDGAMVAR 338 (515)
Q Consensus 271 ~dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIa--KIEt~~aveNldeIl~~-sDgImIgr 338 (515)
+.++.+++.|+|+|.+.- -+.+++.++++.+.....+++|.+ -| -.+|+.++++. +|+|-+|.
T Consensus 193 ee~~~A~~aGaD~I~ld~-~~~~~l~~~v~~l~~~~~~~~i~AsGGI----~~~ni~~~~~aGaD~i~vGs 258 (273)
T 2b7n_A 193 EEAKNAMNAGADIVMCDN-LSVLETKEIAAYRDAHYPFVLLEASGNI----SLESINAYAKSGVDAISVGA 258 (273)
T ss_dssp HHHHHHHHHTCSEEEEET-CCHHHHHHHHHHHHHHCTTCEEEEESSC----CTTTHHHHHTTTCSEEECTH
T ss_pred HHHHHHHHcCCCEEEECC-CCHHHHHHHHHHhhccCCCcEEEEECCC----CHHHHHHHHHcCCcEEEEcH
Confidence 456667788999999986 468888887777765444555443 23 34788888888 89998874
No 367
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A
Probab=33.75 E-value=54 Score=31.88 Aligned_cols=54 Identities=19% Similarity=0.187 Sum_probs=36.3
Q ss_pred CCCHHHHHHHH-HhCCcEEEEecCCCC-----hHHHHHHHHHHHHHHhhcCCceEEEEEecCC
Q 010211 111 TSSREMIWKLA-EEGMNVARLNMSHGD-----HASHQKTIDLVKEYNSQFEDKAVAIMLDTKG 167 (515)
Q Consensus 111 s~~~e~i~~li-~aGm~v~RiN~SHg~-----~e~~~~~i~~ir~~~~~~~~~~i~I~lDL~G 167 (515)
..+.+.++.|. +.|+|++|+-+.... .+.+.+.++.+=+...+.| +.+++|+-+
T Consensus 43 ~~~~~~~~~l~~~~G~N~VRip~~~~~~~~~~~~~~~~~ld~~v~~a~~~G---i~Vild~H~ 102 (303)
T 7a3h_A 43 FVNYESMKWLRDDWGINVFRAAMYTSSGGYIDDPSVKEKVKEAVEAAIDLD---IYVIIDWHI 102 (303)
T ss_dssp GCSHHHHHHHHHHTCCCEEEEEEESSTTSTTTCTTHHHHHHHHHHHHHHHT---CEEEEEEEC
T ss_pred cCCHHHHHHHHHhcCCCEEEEEEEeCCCCccCCHHHHHHHHHHHHHHHHCC---CEEEEEecc
Confidence 34678899998 679999999875421 1224455555555556666 677888755
No 368
>3r8r_A Transaldolase; pentose phosphate pathway, schiff bases; 1.90A {Bacillus subtilis}
Probab=33.75 E-value=42 Score=32.08 Aligned_cols=59 Identities=14% Similarity=0.220 Sum_probs=42.5
Q ss_pred cchhcCCcEEEecccCCHHH--------HHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh----cCeeEEcCC
Q 010211 275 FGVDNQVDFYAVSFVKDAKV--------VHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA----SDGAMVARG 339 (515)
Q Consensus 275 ~al~~gvD~ValSfVrsa~d--------v~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~----sDgImIgrg 339 (515)
.|.+.|+++|+ |||.+-.| +.++.++++..+.++.|++ .+++|..+|.+. +|.+-|.+.
T Consensus 118 ~Aa~AGa~yIS-PfvgRi~d~~~dG~~~v~~i~~~~~~~~~~t~ila-----AS~R~~~~v~~~a~~G~d~~Tip~~ 188 (212)
T 3r8r_A 118 LAARAGATYVS-PFLGRLDDIGHNGLDLISEVKQIFDIHGLDTQIIA-----ASIRHPQHVTEAALRGAHIGTMPLK 188 (212)
T ss_dssp HHHHHTCSEEE-EBHHHHHHTTSCHHHHHHHHHHHHHHHTCCCEEEE-----BSCCSHHHHHHHHHTTCSEEEECHH
T ss_pred HHHHcCCeEEE-eccchhhhcCCChHHHHHHHHHHHHHcCCCCEEEE-----ecCCCHHHHHHHHHcCCCEEEcCHH
Confidence 35678999986 79988766 4456677777777788776 477788888753 777766543
No 369
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=33.69 E-value=2.4e+02 Score=27.62 Aligned_cols=103 Identities=11% Similarity=0.078 Sum_probs=67.8
Q ss_pred chhcCCcEEEe-----cccCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh-cCeeEEcCCcccccCCCCC
Q 010211 276 GVDNQVDFYAV-----SFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIED 349 (515)
Q Consensus 276 al~~gvD~Val-----SfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDgImIgrgDLg~elg~e~ 349 (515)
..+.|++.|.+ -|-.+.+++..+++.. +++|+.|==... -..+++.... +|+|.+.-.+|.
T Consensus 88 y~~~GA~~IsVltd~~~f~Gs~~~L~~ir~~v-----~lPVl~Kdfi~d-~~qi~ea~~~GAD~VlLi~a~L~------- 154 (272)
T 3tsm_A 88 YEEGGAACLSVLTDTPSFQGAPEFLTAARQAC-----SLPALRKDFLFD-PYQVYEARSWGADCILIIMASVD------- 154 (272)
T ss_dssp HHHTTCSEEEEECCSTTTCCCHHHHHHHHHTS-----SSCEEEESCCCS-THHHHHHHHTTCSEEEEETTTSC-------
T ss_pred HHHCCCCEEEEeccccccCCCHHHHHHHHHhc-----CCCEEECCccCC-HHHHHHHHHcCCCEEEEcccccC-------
Confidence 34679998876 2447888888887643 567776610010 1135555444 899999866661
Q ss_pred HHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeec
Q 010211 350 VPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (515)
Q Consensus 350 v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs 406 (515)
..-.+++++.|+..|.-+++-+ -+..| .-.+...|+|.+-.+
T Consensus 155 -~~~l~~l~~~a~~lGl~~lvev-----------h~~eE---l~~A~~~ga~iIGin 196 (272)
T 3tsm_A 155 -DDLAKELEDTAFALGMDALIEV-----------HDEAE---MERALKLSSRLLGVN 196 (272)
T ss_dssp -HHHHHHHHHHHHHTTCEEEEEE-----------CSHHH---HHHHTTSCCSEEEEE
T ss_pred -HHHHHHHHHHHHHcCCeEEEEe-----------CCHHH---HHHHHhcCCCEEEEC
Confidence 2456788899999999888754 23444 447778899988665
No 370
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=33.51 E-value=4.5e+02 Score=28.17 Aligned_cols=137 Identities=10% Similarity=0.026 Sum_probs=0.0
Q ss_pred HhhcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh---cCeeEEcCCcccccCC--
Q 010211 272 DIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA---SDGAMVARGDLGAELP-- 346 (515)
Q Consensus 272 dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~---sDgImIgrgDLg~elg-- 346 (515)
+++.+++.|+|+|-++ ++--.+..+|+.+ +.+..|-+-+-|.+-+....+ .- +|.|.+|+--=+..=+
T Consensus 77 ~~dlA~~~gAdGVHLg--q~dl~~~~ar~~l---g~~~iiG~S~ht~eea~~A~~--~G~~~aDYv~~Gpvf~T~tK~~~ 149 (540)
T 3nl6_A 77 RIDVAMAIGADGIHVG--QDDMPIPMIRKLV---GPDMVIGWSVGFPEEVDELSK--MGPDMVDYIGVGTLFPTLTKKNP 149 (540)
T ss_dssp CSHHHHHTTCSEEEEC--TTSSCHHHHHHHH---CTTSEEEEEECSHHHHHHHHH--TCC--CCEEEESCCSCCCCCC--
T ss_pred cHHHHHHcCCCEEEEC--hhhcCHHHHHHHh---CCCCEEEEECCCHHHHHHHHH--cCCCCCCEEEEcCCCCCCCCCCc
Q ss_pred --CCCHHHHHHHHHHHHHhc---CCcEEEEeccccccccCCCcChHHHhHHHHHHH--------hCCcEEeecccccCCC
Q 010211 347 --IEDVPLLQEDIIRRCRSM---QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVR--------EGADAVMLSGETAHGK 413 (515)
Q Consensus 347 --~e~v~~aqk~Ii~~c~~a---GKPvivATqmLeSMi~~~~PtrAEv~DvanaV~--------~G~D~vmLs~ETa~G~ 413 (515)
.+-=+...+++.+.+.+. .+|++. +-.-.|..+. ..+. .|+|++.+.+.--.-.
T Consensus 150 ~~~~~G~~~l~~i~~~~~~~~~~~iPvvA--------IGGI~~~ni~-----~v~~~~~~~g~~~GadgvAVvsaI~~a~ 216 (540)
T 3nl6_A 150 KKAPMGTAGAIRVLDALERNNAHWCRTVG--------IGGLHPDNIE-----RVLYQCVSSNGKRSLDGICVVSDIIASL 216 (540)
T ss_dssp --CCCHHHHHHHHHHHHHHTTCTTCEEEE--------ESSCCTTTHH-----HHHHHCBCTTSSCBCSCEEESHHHHTCT
T ss_pred CCCCCCHHHHHHHHHHHHhhccCCCCEEE--------EcCCCHHHHH-----HHHHhhcccccccCceEEEEeHHHhcCC
Q ss_pred CHHHHHHHHHHHHHH
Q 010211 414 FPLKAVKVMHTVALR 428 (515)
Q Consensus 414 yPveaV~~m~~I~~~ 428 (515)
-|.++++.+.+++.+
T Consensus 217 dp~~a~~~l~~~~~~ 231 (540)
T 3nl6_A 217 DAAKSTKILRGLIDK 231 (540)
T ss_dssp THHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHh
No 371
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=33.39 E-value=1.9e+02 Score=28.73 Aligned_cols=89 Identities=17% Similarity=0.210 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhhcCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEe
Q 010211 293 KVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVAT 372 (515)
Q Consensus 293 ~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivAT 372 (515)
+.++.++++.++. .+.++.-+-.++.+ +.+.+.+|.+-||-+++ ...+ +++++.+.||||++.|
T Consensus 78 ~GL~~L~~~~~e~--Glp~~Tev~d~~~v---~~l~~~vd~lqIgA~~~------~n~~-----LLr~va~~gkPVilK~ 141 (285)
T 3sz8_A 78 EGLKIFAEVKARF--GVPVITDVHEAEQA---APVAEIADVLQVPAFLA------RQTD-----LVVAIAKAGKPVNVKK 141 (285)
T ss_dssp HHHHHHHHHHHHH--CCCEEEECCSGGGH---HHHHTTCSEEEECGGGT------TCHH-----HHHHHHHTSSCEEEEC
T ss_pred HHHHHHHHHHHhc--CCeEEEEeCCHHHH---HHHHHhCCEEEECcccc------CCHH-----HHHHHHccCCcEEEeC
Confidence 5566677777654 46778877776666 45555699999996655 2333 5555668999999954
Q ss_pred ccccccccCCC-cChHHHhHHHHHHH-hCCcEEeec
Q 010211 373 NMLESMIDHPT-PTRAEVSDIAIAVR-EGADAVMLS 406 (515)
Q Consensus 373 qmLeSMi~~~~-PtrAEv~DvanaV~-~G~D~vmLs 406 (515)
+. .|-.|+...+..+. .|.+-++|.
T Consensus 142 ---------G~~~t~~ei~~ave~i~~~Gn~~i~L~ 168 (285)
T 3sz8_A 142 ---------PQFMSPTQLKHVVSKCGEVGNDRVMLC 168 (285)
T ss_dssp ---------CTTSCGGGTHHHHHHHHHTTCCCEEEE
T ss_pred ---------CCCCCHHHHHHHHHHHHHcCCCcEEEE
Confidence 44 46667777777665 477666664
No 372
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=33.34 E-value=1.9e+02 Score=26.89 Aligned_cols=143 Identities=11% Similarity=-0.023 Sum_probs=75.7
Q ss_pred HHhhcchhcCCcEEEecccCC-H---HHHHHHHHHHHhcCCCceEEEE------ecC------hhhhhcHHHHHhh----
Q 010211 271 EDIKFGVDNQVDFYAVSFVKD-A---KVVHELKDYLKSCNADIHVIVK------IES------ADSIPNLHSIISA---- 330 (515)
Q Consensus 271 ~dI~~al~~gvD~ValSfVrs-a---~dv~~vr~~l~~~~~~i~IIaK------IEt------~~aveNldeIl~~---- 330 (515)
+.++.+.+.|+|+|-+..-.. . .++.++++.+++.|-.+..+.- +-+ .++++.+...++.
T Consensus 21 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~l 100 (290)
T 2qul_A 21 ATAKRIAGLGFDLMEISLGEFHNLSDAKKRELKAVADDLGLTVMCCIGLKSEYDFASPDKSVRDAGTEYVKRLLDDCHLL 100 (290)
T ss_dssp HHHHHHHHTTCSEEEEESTTGGGSCHHHHHHHHHHHHHHTCEEEEEEEECGGGCTTCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEEecCCccccchhhHHHHHHHHHHcCCceEEecCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Confidence 456777788999998865332 1 5788899999887766554331 111 1234555555554
Q ss_pred -cCeeEEc----CCc--ccccCC----CCCHHHHHHHHHHHHHhcCCcEEEEeccccccc---cCCCcChHHHhHHHHHH
Q 010211 331 -SDGAMVA----RGD--LGAELP----IEDVPLLQEDIIRRCRSMQKPVIVATNMLESMI---DHPTPTRAEVSDIAIAV 396 (515)
Q Consensus 331 -sDgImIg----rgD--Lg~elg----~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi---~~~~PtrAEv~DvanaV 396 (515)
+..+.+. .|. +.-... ++.+....+++.+.+.+.|..+.+ |.+- .+...+-.+..++.+.+
T Consensus 101 G~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~l-----En~~~~~~~~~~~~~~~~~l~~~~ 175 (290)
T 2qul_A 101 GAPVFAGLTFCAWPQSPPLDMKDKRPYVDRAIESVRRVIKVAEDYGIIYAL-----EVVNRFEQWLCNDAKEAIAFADAV 175 (290)
T ss_dssp TCSEEEEEEEEESSCCCCTTCCCCHHHHHHHHHHHHTTHHHHHHHTCEEEE-----ECCCTTTCSSCCSHHHHHHHHHHH
T ss_pred CCCEEEeeccccCCcccCCCcccHHHHHHHHHHHHHHHHHHHHHcCCEEEE-----EeCccccccccCCHHHHHHHHHHc
Confidence 4544431 122 111111 134555667788888888987665 3332 12234555555555544
Q ss_pred HhCCcEEeeccccc----CCCCHHHHHH
Q 010211 397 REGADAVMLSGETA----HGKFPLKAVK 420 (515)
Q Consensus 397 ~~G~D~vmLs~ETa----~G~yPveaV~ 420 (515)
|.+.+-+.-+|. .|.-|.+.++
T Consensus 176 --~~~~~g~~~D~~h~~~~g~d~~~~l~ 201 (290)
T 2qul_A 176 --DSPACKVQLDTFHMNIEETSFRDAIL 201 (290)
T ss_dssp --CCTTEEEEEEHHHHHHHCSCHHHHHH
T ss_pred --CCCCEEEEEEchhhhhcCCCHHHHHH
Confidence 233333333442 2445555444
No 373
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=33.27 E-value=62 Score=32.15 Aligned_cols=64 Identities=9% Similarity=0.114 Sum_probs=44.7
Q ss_pred hHHHhhcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh-cCeeEEcC
Q 010211 269 DWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVAR 338 (515)
Q Consensus 269 D~~dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDgImIgr 338 (515)
+.++++.+++.|+|+|.+..+ +++++++..+.++ .++++++ +=.. -.+|+.++++. +|+|-+|.
T Consensus 205 t~eea~eA~~aGaD~I~ld~~-~~~~~k~av~~v~---~~ipi~A-sGGI-t~eni~~~a~tGvD~IsVgs 269 (286)
T 1x1o_A 205 SLEELEEALEAGADLILLDNF-PLEALREAVRRVG---GRVPLEA-SGNM-TLERAKAAAEAGVDYVSVGA 269 (286)
T ss_dssp SHHHHHHHHHHTCSEEEEESC-CHHHHHHHHHHHT---TSSCEEE-ESSC-CHHHHHHHHHHTCSEEECTH
T ss_pred CHHHHHHHHHcCCCEEEECCC-CHHHHHHHHHHhC---CCCeEEE-EcCC-CHHHHHHHHHcCCCEEEEcH
Confidence 456677778889999999875 6777776666653 3455544 1111 26788999888 99999863
No 374
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=33.23 E-value=71 Score=30.33 Aligned_cols=102 Identities=14% Similarity=0.135 Sum_probs=61.0
Q ss_pred cEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh--cCeeEEcCCcccccCCCCCHHHHHHHHHH
Q 010211 282 DFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA--SDGAMVARGDLGAELPIEDVPLLQEDIIR 359 (515)
Q Consensus 282 D~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~--sDgImIgrgDLg~elg~e~v~~aqk~Ii~ 359 (515)
+.+..|| +.+.+..+++. ..++.+..-.+... .+..+.+.. ++++-.. + ..+-+..++
T Consensus 145 ~vii~SF--~~~~l~~~~~~----~p~~~~~~l~~~~~--~~~~~~~~~~~~~~i~~~---------~---~~~~~~~v~ 204 (252)
T 3qvq_A 145 PLLFSSF--NYFALVSAKAL----WPEIARGYNVSAIP--SAWQERLEHLDCAGLHIH---------Q---SFFDVQQVS 204 (252)
T ss_dssp CEEEEES--CHHHHHHHHHH----CTTSCEEEECSSCC--TTHHHHHHHHTCSEEEEE---------G---GGCCHHHHH
T ss_pred CEEEEeC--CHHHHHHHHHH----CCCCcEEEEEecCc--hhHHHHHHHcCCeEEecc---------h---hhCCHHHHH
Confidence 4677787 55555555554 34555544444321 223344443 3333321 1 112357899
Q ss_pred HHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecccccCCCCHHHHHHHHH
Q 010211 360 RCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMH 423 (515)
Q Consensus 360 ~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ETa~G~yPveaV~~m~ 423 (515)
.++++|++|.+-| .+ .| .+...++..|+|+++- +||-.+.+.+.
T Consensus 205 ~~~~~G~~v~~WT-------vn-~~-----~~~~~l~~~GVdgIiT-------D~P~~~~~~l~ 248 (252)
T 3qvq_A 205 DIKAAGYKVLAFT-------IN-DE-----SLALKLYNQGLDAVFS-------DYPQKIQSAID 248 (252)
T ss_dssp HHHHTTCEEEEEC-------CC-CH-----HHHHHHHHTTCCEEEE-------SSHHHHHHHHH
T ss_pred HHHHCCCEEEEEc-------CC-CH-----HHHHHHHHcCCCEEEe-------CCHHHHHHHHH
Confidence 9999999999876 21 22 2455788899999985 68988877765
No 375
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=33.14 E-value=69 Score=28.88 Aligned_cols=58 Identities=14% Similarity=0.185 Sum_probs=40.4
Q ss_pred EEecCCEEEEEeec--CCC---CcceEEeccccccc---ccCcCCEEEEeCCeeEEEEEEEeCCeEEE
Q 010211 180 ILKEGQEFNFTIKR--GVS---TEDTVSVNYDDFVN---DVEVGDILLVDGGMMSLAVKSKTKDLVKC 239 (515)
Q Consensus 180 ~L~~G~~v~lt~~~--~~~---~~~~i~v~~~~l~~---~v~~Gd~IliDDG~I~l~V~~~~~~~v~~ 239 (515)
-.+.|++.+|+... .+| .+....++...|.. .+++|+.+.+++ . ..+|++++++.|..
T Consensus 63 gm~~Ge~~~v~Ipp~~aYG~~~~~~V~~v~~~~f~~~~~~~~~G~~~~~~~-~-~~~V~~v~~~~V~v 128 (157)
T 3pr9_A 63 EMDVGEEREVVLPPEKAFGKRDPSKIKLIPLSEFTKRGIKPIKGLTITIDG-I-PGKIVSINSGRVLV 128 (157)
T ss_dssp HCCTTCEEEEEECGGGTTCCCCGGGEEEEEHHHHHHTTCCCCTTCEEEETT-E-EEEEEEEETTEEEE
T ss_pred CCCCCCEEEEEECcHHhcCCCChHhEEEcCHHHCCcccCCcCCCcEEEecC-C-CeEEEEEcCCEEEE
Confidence 57789999998752 333 34456677667764 257799999964 3 46888998887643
No 376
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=33.01 E-value=2.4e+02 Score=25.69 Aligned_cols=99 Identities=10% Similarity=0.021 Sum_probs=56.4
Q ss_pred HHhhcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEe-c-----------C----hhhhhcHHHHHhh----
Q 010211 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKI-E-----------S----ADSIPNLHSIISA---- 330 (515)
Q Consensus 271 ~dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKI-E-----------t----~~aveNldeIl~~---- 330 (515)
+.++.+.+.|.|+|-+.+ ....++.++++.+++.|-.+..+.-- . . .++++.+...++.
T Consensus 19 ~~l~~~~~~G~~~vEl~~-~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~a~~l 97 (260)
T 1k77_A 19 ERFAAARKAGFDAVEFLF-PYNYSTLQIQKQLEQNHLTLALFNTAPGDINAGEWGLSALPGREHEAHADIDLALEYALAL 97 (260)
T ss_dssp GHHHHHHHHTCSEEECSC-CTTSCHHHHHHHHHHTTCEEEEEECCCCCGGGTCSCSTTCTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCCEEEecC-CCCCCHHHHHHHHHHcCCceEEEecCCcccccccCCCCCChhHHHHHHHHHHHHHHHHHHc
Confidence 345666788999988765 33456778888888776544332110 0 0 2344555555544
Q ss_pred -cCeeEEcCCcccccCC----CCCHHHHHHHHHHHHHhcCCcEEE
Q 010211 331 -SDGAMVARGDLGAELP----IEDVPLLQEDIIRRCRSMQKPVIV 370 (515)
Q Consensus 331 -sDgImIgrgDLg~elg----~e~v~~aqk~Ii~~c~~aGKPviv 370 (515)
+..+.+.+|...-... ++.+....+++.+.|.++|..+.+
T Consensus 98 G~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~~ 142 (260)
T 1k77_A 98 NCEQVHVMAGVVPAGEDAERYRAVFIDNIRYAADRFAPHGKRILV 142 (260)
T ss_dssp TCSEEECCCCBCCTTSCHHHHHHHHHHHHHHHHHHHGGGTCEEEE
T ss_pred CCCEEEECcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 4666665554321111 123555667777777778876554
No 377
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=32.94 E-value=64 Score=34.01 Aligned_cols=97 Identities=10% Similarity=0.037 Sum_probs=53.8
Q ss_pred CCHhhHHHh-hcchhcCCcEEEecccCCH---------------------HHHHHHHHHHHhcCCCceEEE--EecChhh
Q 010211 265 ITDKDWEDI-KFGVDNQVDFYAVSFVKDA---------------------KVVHELKDYLKSCNADIHVIV--KIESADS 320 (515)
Q Consensus 265 ltekD~~dI-~~al~~gvD~ValSfVrsa---------------------~dv~~vr~~l~~~~~~i~IIa--KIEt~~a 320 (515)
+++.|..++ +.+.+.|+|+|.++--... ..+..+++.-+..+.++.||+ -|.|.+-
T Consensus 308 ~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iPVIg~GGI~s~~D 387 (443)
T 1tv5_A 308 LNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLD 387 (443)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCcEEEECCCCCHHH
Confidence 566676555 4556789999988752110 012223333333345788887 6666544
Q ss_pred hhcHHHHHhh-cCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCC
Q 010211 321 IPNLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQK 366 (515)
Q Consensus 321 veNldeIl~~-sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGK 366 (515)
. .+.+.. +|+|++||+=|.- |..-+..+.+.+-+...+.|.
T Consensus 388 A---~e~l~aGAd~Vqigrall~~--gP~l~~~i~~~l~~~l~~~G~ 429 (443)
T 1tv5_A 388 A---LEKIEAGASVCQLYSCLVFN--GMKSAVQIKRELNHLLYQRGY 429 (443)
T ss_dssp H---HHHHHTTEEEEEESHHHHHH--GGGHHHHHHHHHHHHHHHHTC
T ss_pred H---HHHHHcCCCEEEEcHHHHhc--ChHHHHHHHHHHHHHHHHhCC
Confidence 3 233334 9999999986631 222333444444444555553
No 378
>1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3
Probab=32.89 E-value=54 Score=33.71 Aligned_cols=52 Identities=15% Similarity=0.318 Sum_probs=34.2
Q ss_pred CHHHHHHHHHhCCcEEEEecCC-------CCh---HHHHHHHHHHHHHHhhcCCceEEEEEecCC
Q 010211 113 SREMIWKLAEEGMNVARLNMSH-------GDH---ASHQKTIDLVKEYNSQFEDKAVAIMLDTKG 167 (515)
Q Consensus 113 ~~e~i~~li~aGm~v~RiN~SH-------g~~---e~~~~~i~~ir~~~~~~~~~~i~I~lDL~G 167 (515)
+.+.++.|.++|+|++||-++. |.+ +...+.++.+=+..++.| +.+++|+-+
T Consensus 75 te~d~~~i~~~G~N~VRipi~~~~~~~~~~~py~~~~~l~~ld~vv~~a~~~G---i~VilDlH~ 136 (408)
T 1h4p_A 75 QEQDFANIASQGFNLVRIPIGYWAFQILDDDPYVSGLQESYLDQAIGWARNNS---LKVWVDLHG 136 (408)
T ss_dssp CHHHHHHHHHTTCCEEEEEEEGGGTCCCTTCCCCCSSHHHHHHHHHHHHHHTT---CEEEEEEEE
T ss_pred CHHHHHHHHHCCCCEEEccCCHHHcccCCCCCCccccHHHHHHHHHHHHHHCC---CEEEEECCC
Confidence 4778999999999999997641 211 113444444444555556 778888753
No 379
>2dpr_A CON-T(K7GLA); conantoxin, nmdar antagonist, GLA-containing, metal B protein; HET: CGU; 1.70A {Synthetic} PDB: 1ont_A*
Probab=32.88 E-value=30 Score=21.96 Aligned_cols=17 Identities=12% Similarity=0.227 Sum_probs=13.9
Q ss_pred hHHHHHHHHHHHHHHhh
Q 010211 137 HASHQKTIDLVKEYNSQ 153 (515)
Q Consensus 137 ~e~~~~~i~~ir~~~~~ 153 (515)
.++.+++++|+|+++-+
T Consensus 2 eeeyqemlenlreaevk 18 (26)
T 2dpr_A 2 EEEYQEMLENLREAEVK 18 (26)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHH
Confidence 36789999999998744
No 380
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=32.86 E-value=1.1e+02 Score=30.85 Aligned_cols=46 Identities=9% Similarity=0.239 Sum_probs=34.0
Q ss_pred HHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHhhcCCceEEEEEec
Q 010211 116 MIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDT 165 (515)
Q Consensus 116 ~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~~~~~~~~~~i~I~lDL 165 (515)
..+++.++|.+.+.+...|++.+.-.+.++.||++ .| ..+.|++|.
T Consensus 146 ~a~~~~~~Gf~~vKik~g~~~~~~d~e~v~avR~a---~G-~d~~l~vDa 191 (382)
T 2gdq_A 146 NVEAQLKKGFEQIKVKIGGTSFKEDVRHINALQHT---AG-SSITMILDA 191 (382)
T ss_dssp HHHHHHTTTCCEEEEECSSSCHHHHHHHHHHHHHH---HC-TTSEEEEEC
T ss_pred HHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHh---hC-CCCEEEEEC
Confidence 44567789999999999998877767777777764 44 445666775
No 381
>1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A*
Probab=32.77 E-value=55 Score=32.72 Aligned_cols=51 Identities=18% Similarity=0.199 Sum_probs=34.6
Q ss_pred CHHHHHHHH-HhCCcEEEEecCCC------ChHHHHHHHHHHHHHHhhcCCceEEEEEecCC
Q 010211 113 SREMIWKLA-EEGMNVARLNMSHG------DHASHQKTIDLVKEYNSQFEDKAVAIMLDTKG 167 (515)
Q Consensus 113 ~~e~i~~li-~aGm~v~RiN~SHg------~~e~~~~~i~~ir~~~~~~~~~~i~I~lDL~G 167 (515)
+.+.++.|. +.|+|++||-+..+ +++.. +.++.+=+...+.| +.+++|+-+
T Consensus 55 ~~~d~~~l~~~~G~N~VRip~~~~~~~~~~~~~~l-~~ld~~v~~a~~~G---i~VIld~H~ 112 (364)
T 1g01_A 55 NENAFVALSNDWGSNMIRLAMYIGENGYATNPEVK-DLVYEGIELAFEHD---MYVIVDWHV 112 (364)
T ss_dssp SHHHHHHHHTTSCCSEEEEEEESSSSSTTTCTTHH-HHHHHHHHHHHHTT---CEEEEEEEC
T ss_pred CHHHHHHHHHHCCCCEEEEEeeeCCCCCccCHHHH-HHHHHHHHHHHHCC---CEEEEEecc
Confidence 568899997 89999999987742 23333 44444444455556 778888865
No 382
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=32.68 E-value=51 Score=31.78 Aligned_cols=59 Identities=14% Similarity=0.262 Sum_probs=37.8
Q ss_pred hcHHHHHhh-cCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCC
Q 010211 322 PNLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGA 400 (515)
Q Consensus 322 eNldeIl~~-sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~ 400 (515)
+.++.+++. +|+|||| | +.|.. ..-..+++++.++...|++..+ ..|. .+..|+
T Consensus 22 ~~~~~~~~~GtD~i~vG-G----s~gvt--~~~~~~~v~~ik~~~~Pvvlfp---------~~~~---------~v~~ga 76 (228)
T 3vzx_A 22 EQLEILCESGTDAVIIG-G----SDGVT--EDNVLRMMSKVRRFLVPCVLEV---------SAIE---------AIVPGF 76 (228)
T ss_dssp THHHHHHTSSCSEEEEC-C----CSCCC--HHHHHHHHHHHTTSSSCEEEEC---------SCGG---------GCCSCC
T ss_pred HHHHHHHHcCCCEEEEC-C----cCCCC--HHHHHHHHHHhhccCCCEEEeC---------CCHH---------HccccC
Confidence 456666666 8999999 4 33332 2344555666666899999843 2232 244799
Q ss_pred cEEee
Q 010211 401 DAVML 405 (515)
Q Consensus 401 D~vmL 405 (515)
|++++
T Consensus 77 D~~l~ 81 (228)
T 3vzx_A 77 DLYFI 81 (228)
T ss_dssp SEEEE
T ss_pred CEEEE
Confidence 99873
No 383
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=32.65 E-value=1.6e+02 Score=28.00 Aligned_cols=66 Identities=17% Similarity=0.266 Sum_probs=46.2
Q ss_pred HHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhhcCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEe
Q 010211 296 HELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVAT 372 (515)
Q Consensus 296 ~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivAT 372 (515)
..+++.+.+.|.++.+.+.-+... -+|++++++-.|.|+-+-. . ......+-+.|.+.++|.+.+.
T Consensus 85 ~~~~~~l~~~np~~~v~~~~~~~~-~~~~~~~~~~~DvVi~~~d---------~-~~~r~~l~~~~~~~~~p~i~~~ 150 (251)
T 1zud_1 85 QVSQQRLTQLNPDIQLTALQQRLT-GEALKDAVARADVVLDCTD---------N-MATRQEINAACVALNTPLITAS 150 (251)
T ss_dssp HHHHHHHHHHCTTSEEEEECSCCC-HHHHHHHHHHCSEEEECCS---------S-HHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHCCCCEEEEEeccCC-HHHHHHHHhcCCEEEECCC---------C-HHHHHHHHHHHHHhCCCEEEEe
Confidence 345667777787777665444332 2688888888998887622 2 2356788899999999988753
No 384
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=32.33 E-value=2.5e+02 Score=26.58 Aligned_cols=109 Identities=15% Similarity=0.179 Sum_probs=60.0
Q ss_pred HHhhcchhcCCcEEEe-----cccCC----HHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhhcCeeEEcCCcc
Q 010211 271 EDIKFGVDNQVDFYAV-----SFVKD----AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDL 341 (515)
Q Consensus 271 ~dI~~al~~gvD~Val-----SfVrs----a~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDgImIgrgDL 341 (515)
+.++.+.+.|+|++-+ .||.+ ...++.+|++.. +..+-+=.||+.++.. ++..+. +|.+-+=
T Consensus 22 ~~i~~~~~~g~d~iHvDvmDg~fvpn~t~G~~~v~~lr~~~p--~~~~dvhLmv~dp~~~--i~~~~~-Ad~itvH---- 92 (227)
T 1tqx_A 22 EETQRMESLGAEWIHLDVMDMHFVPNLSFGPPVINNLKKYTK--SIFFDVHLMVEYPEKY--VPLLKT-SNQLTFH---- 92 (227)
T ss_dssp HHHHHHHHTTCSEEEEEEEBSSSSSCBCCCHHHHHHHGGGCS--SCEEEEEEESSCGGGG--GGGCTT-SSEEEEE----
T ss_pred HHHHHHHHcCCCEEEEEEEeCCcCcchhcCHHHHHHHHHhCC--CCcEEEEEEEcCHHHH--HHHHHh-CCEEEEe----
Confidence 4455555667776422 44443 233333433210 2334455688887754 566666 8877662
Q ss_pred cccCCCCCHHHHHHHHHH---HHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHh--CCcEEee
Q 010211 342 GAELPIEDVPLLQEDIIR---RCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVRE--GADAVML 405 (515)
Q Consensus 342 g~elg~e~v~~aqk~Ii~---~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~--G~D~vmL 405 (515)
..-. ..-..+.++ .++++|+-++++. +..+| .| .+ ..+.+ +.|.+++
T Consensus 93 ---~ea~--~~~~~~~i~~~~~i~~~G~k~gval-------np~tp--~~--~~-~~~l~~g~~D~Vlv 144 (227)
T 1tqx_A 93 ---FEAL--NEDTERCIQLAKEIRDNNLWCGISI-------KPKTD--VQ--KL-VPILDTNLINTVLV 144 (227)
T ss_dssp ---GGGG--TTCHHHHHHHHHHHHTTTCEEEEEE-------CTTSC--GG--GG-HHHHTTTCCSEEEE
T ss_pred ---ecCC--ccCHHHHHHHHHHHHHcCCeEEEEe-------CCCCc--HH--HH-HHHhhcCCcCEEEE
Confidence 1111 102346777 8899999999974 22233 22 22 34555 5999975
No 385
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=32.21 E-value=81 Score=32.02 Aligned_cols=45 Identities=18% Similarity=0.307 Sum_probs=33.8
Q ss_pred HHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHhhcCCceEEEEEec
Q 010211 117 IWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDT 165 (515)
Q Consensus 117 i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~~~~~~~~~~i~I~lDL 165 (515)
.+++.++|.+.+.|+..|++.+.-.+.++.||++ .| ..+.|++|.
T Consensus 173 a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a---~g-~~~~l~vDa 217 (392)
T 1tzz_A 173 MRGYLDRGYNVVKMKIGGAPIEEDRMRIEAVLEE---IG-KDAQLAVDA 217 (392)
T ss_dssp HHHHHTTTCSEEEEECSSSCHHHHHHHHHHHHHH---HT-TTCEEEEEC
T ss_pred HHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHh---cC-CCCeEEEEC
Confidence 4667889999999999998887777777777764 44 445666775
No 386
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A
Probab=31.80 E-value=44 Score=34.58 Aligned_cols=51 Identities=10% Similarity=0.255 Sum_probs=34.4
Q ss_pred CHHHHHHHHHhCCcEEEEecCC-------CChH--HHHHHHHHHHHHHhhcCCceEEEEEecC
Q 010211 113 SREMIWKLAEEGMNVARLNMSH-------GDHA--SHQKTIDLVKEYNSQFEDKAVAIMLDTK 166 (515)
Q Consensus 113 ~~e~i~~li~aGm~v~RiN~SH-------g~~e--~~~~~i~~ir~~~~~~~~~~i~I~lDL~ 166 (515)
+.+.++.|.++|+|++||-+++ +.+- ...+.++.+=+...+.| +.+++||-
T Consensus 75 te~D~~~ik~~G~N~VRipi~~~~~~~~~~~py~~~~~~~ld~vV~~a~~~G---l~VILDlH 134 (399)
T 3n9k_A 75 TEQDFKQISNLGLNFVRIPIGYWAFQLLDNDPYVQGQVQYLEKALGWARKNN---IRVWIDLH 134 (399)
T ss_dssp CHHHHHHHHHTTCCEEEEEEEGGGTCCCTTCCCCCCHHHHHHHHHHHHHHTT---CEEEEEEE
T ss_pred cHHHHHHHHHcCCCEEEEcccHHHccCCCCCccchhHHHHHHHHHHHHHHCC---CEEEEEec
Confidence 5788999999999999998862 2220 12344444445555656 88899973
No 387
>1zcc_A Glycerophosphodiester phosphodiesterase; NYSGXRC, agrobacterium tumefaciens STR. C58, structural genomics; 2.50A {Agrobacterium tumefaciens str} SCOP: c.1.18.3
Probab=31.80 E-value=2.6e+02 Score=26.21 Aligned_cols=56 Identities=16% Similarity=0.119 Sum_probs=40.9
Q ss_pred HHH-HHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHH-HHHhCCcEEeecccccCCCCHHHHHHHHHHHH
Q 010211 351 PLL-QEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAI-AVREGADAVMLSGETAHGKFPLKAVKVMHTVA 426 (515)
Q Consensus 351 ~~a-qk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~Dvan-aV~~G~D~vmLs~ETa~G~yPveaV~~m~~I~ 426 (515)
..+ -...++.++++|++|.+-| .+ .| .+... ++..|+|+++- +||..+.+.+.+.+
T Consensus 179 ~~~~~~~~v~~~~~~G~~v~~wT-------vn-~~-----~~~~~~l~~~GvdgIiT-------D~p~~~~~~~~~~~ 236 (248)
T 1zcc_A 179 AQMRRPGIIEASRKAGLEIMVYY-------GG-DD-----MAVHREIATSDVDYINL-------DRPDLFAAVRSGMA 236 (248)
T ss_dssp HHHHSHHHHHHHHHHTCEEEEEC-------CC-CC-----HHHHHHHHHSSCSEEEE-------SCHHHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHCCCEEEEEC-------CC-CH-----HHHHHHHHHcCCCEEEE-------CCHHHHHHHHHHhc
Confidence 344 5789999999999999977 12 22 23446 77889999875 68988887776543
No 388
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=31.45 E-value=1.3e+02 Score=29.94 Aligned_cols=104 Identities=20% Similarity=0.291 Sum_probs=58.7
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEe--cChhhhhcHHHHHhh-cCeeEEcCCcccccCCCCCHHHHHHHHHHHHHh--cC
Q 010211 291 DAKVVHELKDYLKSCNADIHVIVKI--ESADSIPNLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRS--MQ 365 (515)
Q Consensus 291 sa~dv~~vr~~l~~~~~~i~IIaKI--Et~~aveNldeIl~~-sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~--aG 365 (515)
+.++++++++. -.+++++|. -. ++-.+.+.+. +|+| |.+..+..++ +++.+++ .|
T Consensus 66 ~~~~i~~i~~~-----v~iPvl~k~~i~~---ide~qil~aaGAD~I-----d~s~~~~~~~-------li~~i~~~~~g 125 (297)
T 4adt_A 66 DPLKIEEIRKC-----ISINVLAKVRIGH---FVEAQILEELKVDML-----DESEVLTMAD-------EYNHINKHKFK 125 (297)
T ss_dssp CHHHHHHHHTT-----CCSEEEEEEETTC---HHHHHHHHHTTCSEE-----EEETTSCCSC-------SSCCCCGGGCS
T ss_pred CHHHHHHHHHh-----cCCCEEEeccCCc---HHHHHHHHHcCCCEE-----EcCCCCCHHH-------HHHHHHhcCCC
Confidence 56666555543 268888874 33 4444444444 8998 3222222222 2223333 57
Q ss_pred CcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecccccCCCCHHHHHHHHHHHHHHH
Q 010211 366 KPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRT 429 (515)
Q Consensus 366 KPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~a 429 (515)
.++++-. .+..| .-.++..|+|.+-..+.-..| .-+++|+++..+..++
T Consensus 126 ~~vvv~v-----------~~~~E---a~~a~~~Gad~I~v~g~~gTG-~~~~~v~h~~~~~~ei 174 (297)
T 4adt_A 126 TPFVCGC-----------TNLGE---ALRRISEGASMIRTKGEAGTG-NIIEAIKHIRTVNNEI 174 (297)
T ss_dssp SCEEEEE-----------SSHHH---HHHHHHHTCSEEEECCCTTSC-CCHHHHHHHHHHHHHH
T ss_pred CeEEEEe-----------CCHHH---HHHHHhCCCCEEEECCCcCCC-chHHHHHHHHHhhhhh
Confidence 7777622 23333 346678899999988652222 3489999998876444
No 389
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=31.35 E-value=1e+02 Score=28.46 Aligned_cols=69 Identities=22% Similarity=0.172 Sum_probs=39.9
Q ss_pred hHHHhhcchhcCCcEEEeccc---CCH------HHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh-cCeeEEcC
Q 010211 269 DWEDIKFGVDNQVDFYAVSFV---KDA------KVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVAR 338 (515)
Q Consensus 269 D~~dI~~al~~gvD~ValSfV---rsa------~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDgImIgr 338 (515)
+.+++..+. .|+|||.++-+ .+. -++..++...+....++++++ |=-. ..+|+.+.++. ++||-+++
T Consensus 97 t~~e~~~A~-~GaDyv~~g~vf~t~sk~~~~~~~g~~~l~~~~~~~~~~iPvia-iGGI-~~~nv~~~~~~Ga~gVav~s 173 (210)
T 3ceu_A 97 SVEEVKNRK-HFYDYVFMSPIYDSISKVNYYSTYTAEELREAQKAKIIDSKVMA-LGGI-NEDNLLEIKDFGFGGAVVLG 173 (210)
T ss_dssp SHHHHHTTG-GGSSEEEECCCC---------CCCCHHHHHHHHHTTCSSTTEEE-ESSC-CTTTHHHHHHTTCSEEEESH
T ss_pred CHHHHHHHh-hCCCEEEECCcCCCCCCCCCCCCCCHHHHHHHHHhcCCCCCEEE-ECCC-CHHHHHHHHHhCCCEEEEhH
Confidence 344566666 89999987654 111 134445554432113566666 2211 25688888887 89999886
Q ss_pred Cc
Q 010211 339 GD 340 (515)
Q Consensus 339 gD 340 (515)
+=
T Consensus 174 ~i 175 (210)
T 3ceu_A 174 DL 175 (210)
T ss_dssp HH
T ss_pred Hh
Confidence 53
No 390
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=31.24 E-value=1.8e+02 Score=29.08 Aligned_cols=89 Identities=12% Similarity=0.166 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhhcCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEe
Q 010211 293 KVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVAT 372 (515)
Q Consensus 293 ~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivAT 372 (515)
+.++.++++.++. .+.+++-+-.++.++ .+.+.+|.+-||-+++ ...+ +++++.+.||||++.|
T Consensus 99 ~GL~~L~~~~~e~--GLpv~Tev~D~~~v~---~l~~~vd~lkIgA~~~------~n~~-----LLr~va~~gkPVilK~ 162 (298)
T 3fs2_A 99 KALEVFSDLKKEY--GFPVLTDIHTEEQCA---AVAPVVDVLQIPAFLC------RQTD-----LLIAAARTGRVVNVKK 162 (298)
T ss_dssp HHHHHHHHHHHHH--CCCEEEECCSHHHHH---HHTTTCSEEEECGGGT------TCHH-----HHHHHHHTTSEEEEEC
T ss_pred HHHHHHHHHHHhc--CCeEEEEeCCHHHHH---HHHhhCCEEEECcccc------CCHH-----HHHHHHccCCcEEEeC
Confidence 4455566776554 467888777766664 4455599999996554 2333 3445557899999954
Q ss_pred ccccccccCCC-cChHHHhHHHHHHHh-CCcEEeec
Q 010211 373 NMLESMIDHPT-PTRAEVSDIAIAVRE-GADAVMLS 406 (515)
Q Consensus 373 qmLeSMi~~~~-PtrAEv~DvanaV~~-G~D~vmLs 406 (515)
+. -|-.|+...+..+.. |.+-++|.
T Consensus 163 ---------Gms~t~~ei~~ave~i~~~Gn~~iiL~ 189 (298)
T 3fs2_A 163 ---------GQFLAPWDMKNVLAKITESGNPNVLAT 189 (298)
T ss_dssp ---------CTTCCGGGHHHHHHHHHTTTCCCEEEE
T ss_pred ---------CCCCCHHHHHHHHHHHHHcCCCeEEEE
Confidence 44 466787777777754 66666664
No 391
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=31.23 E-value=87 Score=31.55 Aligned_cols=60 Identities=15% Similarity=0.256 Sum_probs=40.1
Q ss_pred CeEEEEecCCCCCCHH----HHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHhhcCCceEEEEEec
Q 010211 100 KTKIVCTIGPSTSSRE----MIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDT 165 (515)
Q Consensus 100 ~TKIi~TiGPss~~~e----~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~~~~~~~~~~i~I~lDL 165 (515)
+..+..|+|- .++| ..+++.++|.+.+.+++.|++.+.-.+.++.+|+ ..| ..+.+++|.
T Consensus 134 ~v~~~~~~~~--~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~---a~g-~~~~l~vDa 197 (378)
T 2qdd_A 134 PVPINSSIST--GTPDQMLGLIAEAAAQGYRTHSAKIGGSDPAQDIARIEAISA---GLP-DGHRVTFDV 197 (378)
T ss_dssp CEEBEEEECS--CCHHHHHHHHHHHHHHTCCEEEEECCSSCHHHHHHHHHHHHH---SCC-TTCEEEEEC
T ss_pred CCceEEEecC--CCHHHHHHHHHHHHHHhhhheeecCCCCChHHHHHHHHHHHH---HhC-CCCEEEEeC
Confidence 4556677764 3444 3556788999999999999876665666666654 454 345566664
No 392
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=31.10 E-value=49 Score=31.43 Aligned_cols=82 Identities=11% Similarity=0.005 Sum_probs=49.6
Q ss_pred HHHhhcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh-cCeeEEcCCcccccCCCC
Q 010211 270 WEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIE 348 (515)
Q Consensus 270 ~~dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDgImIgrgDLg~elg~e 348 (515)
.+..+.+.+.|+|++.+|- ..++++..+|+.+ ++-+.+..=|=- +| .+..+.++. +|.++|||+=...+=|.+
T Consensus 125 ~~~a~~a~~~g~~GvV~sa-t~p~e~~~ir~~~---~~~~~vtPGI~~-~g-~tp~~a~~~Gad~iVVGR~I~~A~dP~~ 198 (222)
T 4dbe_A 125 DYIKNVIREISPKGIVVGG-TKLDHITQYRRDF---EKMTIVSPGMGS-QG-GSYGDAVCAGADYEIIGRSIYNAGNPLT 198 (222)
T ss_dssp HHHHHHHHHHCCSEEEECT-TCHHHHHHHHHHC---TTCEEEECCBST-TS-BCTTHHHHHTCSEEEECHHHHTSSSHHH
T ss_pred HHHHHHHHHhCCCEEEECC-CCHHHHHHHHHhC---CCCEEEcCCccc-Cc-cCHHHHHHcCCCEEEECHHhcCCCCHHH
Confidence 3444566678999987773 4567888888765 332233344532 22 146555555 999999998877654443
Q ss_pred CHHHHHHHH
Q 010211 349 DVPLLQEDI 357 (515)
Q Consensus 349 ~v~~aqk~I 357 (515)
....+++++
T Consensus 199 aa~~i~~~i 207 (222)
T 4dbe_A 199 ALRTINKII 207 (222)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 333333333
No 393
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A
Probab=31.00 E-value=61 Score=32.13 Aligned_cols=54 Identities=17% Similarity=0.201 Sum_probs=34.9
Q ss_pred CCCHHHHHHHH-HhCCcEEEEecCCCCh-----HHHHHHHHHHHHHHhhcCCceEEEEEecCC
Q 010211 111 TSSREMIWKLA-EEGMNVARLNMSHGDH-----ASHQKTIDLVKEYNSQFEDKAVAIMLDTKG 167 (515)
Q Consensus 111 s~~~e~i~~li-~aGm~v~RiN~SHg~~-----e~~~~~i~~ir~~~~~~~~~~i~I~lDL~G 167 (515)
..+.+.++.|. +.|+|++|+-+.+... +...+.++.+=+...+.| +.+++|+-+
T Consensus 68 ~~~~~~~~~l~~~~G~N~VRi~~~~~~~~~~~~~~~~~~ld~~v~~a~~~G---i~VilD~H~ 127 (327)
T 3pzt_A 68 YVNKDSLKWLRDDWGITVFRAAMYTADGGYIDNPSVKNKVKEAVEAAKELG---IYVIIDWHI 127 (327)
T ss_dssp GCSHHHHHHHHHHTCCSEEEEEEESSTTSTTTCGGGHHHHHHHHHHHHHHT---CEEEEEEEC
T ss_pred CCCHHHHHHHHHhcCCCEEEEEeEECCCCcccCHHHHHHHHHHHHHHHHCC---CEEEEEecc
Confidence 34677899886 6899999997765321 122344444445555666 677888754
No 394
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=31.00 E-value=2.9e+02 Score=27.26 Aligned_cols=87 Identities=7% Similarity=0.114 Sum_probs=55.4
Q ss_pred HHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhhcCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEec
Q 010211 294 VVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATN 373 (515)
Q Consensus 294 dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATq 373 (515)
.++.++++.++. .+.+++-+-.+..++-+. +.+|.+-||-+++- ..+ +++++.+.||||++.|
T Consensus 77 gl~~l~~~~~~~--Glp~~te~~d~~~~~~l~---~~vd~~kIgA~~~~------n~~-----Ll~~~a~~~kPV~lk~- 139 (292)
T 1o60_A 77 GLKIFQELKDTF--GVKIITDVHEIYQCQPVA---DVVDIIQLPAFLAR------QTD-----LVEAMAKTGAVINVKK- 139 (292)
T ss_dssp HHHHHHHHHHHH--CCEEEEECCSGGGHHHHH---TTCSEEEECGGGTT------CHH-----HHHHHHHTTCEEEEEC-
T ss_pred HHHHHHHHHHHc--CCcEEEecCCHHHHHHHH---hcCCEEEECccccc------CHH-----HHHHHHcCCCcEEEeC-
Confidence 344556665443 467888777776665554 46899999976653 222 5555568899999954
Q ss_pred cccccccCCC-cChHHHhHHHHHHH-hCC-cEEee
Q 010211 374 MLESMIDHPT-PTRAEVSDIAIAVR-EGA-DAVML 405 (515)
Q Consensus 374 mLeSMi~~~~-PtrAEv~DvanaV~-~G~-D~vmL 405 (515)
+. -+-.|+...+..+. .|. |++++
T Consensus 140 --------G~~~t~~ei~~Av~~i~~~Gn~~i~L~ 166 (292)
T 1o60_A 140 --------PQFLSPSQMGNIVEKIEECGNDKIILC 166 (292)
T ss_dssp --------CTTSCGGGHHHHHHHHHHTTCCCEEEE
T ss_pred --------CCCCCHHHHHHHHHHHHHcCCCeEEEE
Confidence 44 25567777666665 465 44444
No 395
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=30.76 E-value=1.4e+02 Score=28.88 Aligned_cols=99 Identities=13% Similarity=0.121 Sum_probs=54.8
Q ss_pred HhhcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEe---cCh--------hhhhcHHHHHhhcCeeEEcCCc
Q 010211 272 DIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKI---ESA--------DSIPNLHSIISASDGAMVARGD 340 (515)
Q Consensus 272 dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKI---Et~--------~aveNldeIl~~sDgImIgrgD 340 (515)
-|+.+.+.|++.+.+.- .+.++...+.++.++.+ ++...+-| +.. +.++.|++.+...+.-.+|=|.
T Consensus 32 vl~~~~~~GV~~~v~~~-~~~~~~~~~~~la~~~~-~v~~~~GiHP~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~aIGE 109 (301)
T 2xio_A 32 VIGRAVEIGVKKFMITG-GNLQDSKDALHLAQTNG-MFFSTVGCHPTRCGEFEKNNPDLYLKELLNLAENNKGKVVAIGE 109 (301)
T ss_dssp HHHHHHHHTEEEEEECC-CSHHHHHHHHHHHTTCT-TEEEEECCCGGGTHHHHHHCHHHHHHHHHHHHHTCTTTEEEEEE
T ss_pred HHHHHHHCCCCEEEEeC-CCHHHHHHHHHHHHHCC-CEEEEEEECcChhhhCcccccHHHHHHHHHHHhcCCCCeEEEEE
Confidence 34566678999877653 46777777766655433 33333333 110 2233344443322113344466
Q ss_pred ccccCCC-C-CHHHHH----HHHHHHHHhcCCcEEEEe
Q 010211 341 LGAELPI-E-DVPLLQ----EDIIRRCRSMQKPVIVAT 372 (515)
Q Consensus 341 Lg~elg~-e-~v~~aq----k~Ii~~c~~aGKPvivAT 372 (515)
.|.+... . .-...| +..++.|++.|+||++-|
T Consensus 110 iGLd~~~~~~~~~~~Q~~~f~~ql~lA~~~~lPv~iH~ 147 (301)
T 2xio_A 110 CGLDFDRLQFCPKDTQLKYFEKQFELSEQTKLPMFLHC 147 (301)
T ss_dssp EEEETTCTTTSCHHHHHHHHHHTHHHHHHHCCCEEEEE
T ss_pred eeCCCCcCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEe
Confidence 6666533 1 112344 566788999999999966
No 396
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=30.66 E-value=3.5e+02 Score=26.49 Aligned_cols=104 Identities=10% Similarity=0.127 Sum_probs=61.6
Q ss_pred HHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhhcCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEecc
Q 010211 295 VHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNM 374 (515)
Q Consensus 295 v~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqm 374 (515)
++.++++.++. .+.+++-+=.+..++-+.+ .+|.+-||-+++ ...+ +++++.+.||||++.|
T Consensus 75 l~~l~~~~~~~--Gl~~~te~~d~~~~~~l~~---~~d~~kIga~~~------~n~~-----ll~~~a~~~kPV~lk~-- 136 (280)
T 2qkf_A 75 LKIFEKVKAEF--GIPVITDVHEPHQCQPVAE---VCDVIQLPAFLA------RQTD-----LVVAMAKTGNVVNIKK-- 136 (280)
T ss_dssp HHHHHHHHHHH--CCCEEEECCSGGGHHHHHH---HCSEEEECGGGT------TBHH-----HHHHHHHTCCEEEEEC--
T ss_pred HHHHHHHHHHc--CCcEEEecCCHHHHHHHHh---hCCEEEECcccc------cCHH-----HHHHHHcCCCcEEEEC--
Confidence 44455655443 4667777777766655544 479999996554 2333 5555567899999954
Q ss_pred ccccccCCC-cChHHHhHHHHHHH-hCC-cEEeecccccCCCCHH-----HHHHHHHH
Q 010211 375 LESMIDHPT-PTRAEVSDIAIAVR-EGA-DAVMLSGETAHGKFPL-----KAVKVMHT 424 (515)
Q Consensus 375 LeSMi~~~~-PtrAEv~DvanaV~-~G~-D~vmLs~ETa~G~yPv-----eaV~~m~~ 424 (515)
+. .|-.|+...+..+. .|. |++++---+.. .|+. .++..|++
T Consensus 137 -------G~~~t~~e~~~A~~~i~~~Gn~~i~L~~rg~~~-~~~~~~~dl~~i~~lk~ 186 (280)
T 2qkf_A 137 -------PQFLSPSQMKNIVEKFHEAGNGKLILCERGSSF-GYDNLVVDMLGFGVMKQ 186 (280)
T ss_dssp -------CTTSCGGGHHHHHHHHHHTTCCCEEEEECCEEC-STTCEECCTTHHHHHHH
T ss_pred -------CCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCC-CCCccccCHHHHHHHHH
Confidence 44 25567777666665 465 44444222222 5532 35665544
No 397
>2bti_A Carbon storage regulator homolog; RMSA, CSRA, RNA binding protein; 2.0A {Yersinia enterocolitica} PDB: 1y00_A
Probab=30.47 E-value=71 Score=24.99 Aligned_cols=28 Identities=18% Similarity=0.343 Sum_probs=23.7
Q ss_pred ccCcCCEEEEeCCeeEEEEEEEeCCeEEE
Q 010211 211 DVEVGDILLVDGGMMSLAVKSKTKDLVKC 239 (515)
Q Consensus 211 ~v~~Gd~IliDDG~I~l~V~~~~~~~v~~ 239 (515)
.-++|..|.|+| .|..+|.++.++.|+.
T Consensus 7 tRk~GE~I~Igd-~I~I~Vl~i~g~~Vrl 34 (63)
T 2bti_A 7 TRRVGETLMIGD-EVTVTVLGVKGNQVRI 34 (63)
T ss_dssp EEETTCEEEETT-TEEEEEEEEETTEEEE
T ss_pred eccCCCeEEeCC-CEEEEEEEEeCCEEEE
Confidence 347899999987 7999999999988765
No 398
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=30.41 E-value=33 Score=34.17 Aligned_cols=65 Identities=18% Similarity=0.175 Sum_probs=47.0
Q ss_pred hHHHhhcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecChhh--hhcHHHHHhh-cCeeEEcC
Q 010211 269 DWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADS--IPNLHSIISA-SDGAMVAR 338 (515)
Q Consensus 269 D~~dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~a--veNldeIl~~-sDgImIgr 338 (515)
+.+.++.+++.|+|+|.+.. -+.++++++.+.+...+.++++ |---| .+|+.++++. +|+|-+|.
T Consensus 202 tleea~eA~~aGaD~I~LDn-~~~e~l~~av~~l~~~~~~v~i----eASGGIt~eni~~~a~tGVD~IsvGs 269 (285)
T 1o4u_A 202 NLEDALRAVEAGADIVMLDN-LSPEEVKDISRRIKDINPNVIV----EVSGGITEENVSLYDFETVDVISSSR 269 (285)
T ss_dssp SHHHHHHHHHTTCSEEEEES-CCHHHHHHHHHHHHHHCTTSEE----EEEECCCTTTGGGGCCTTCCEEEEGG
T ss_pred CHHHHHHHHHcCCCEEEECC-CCHHHHHHHHHHhhccCCCceE----EEECCCCHHHHHHHHHcCCCEEEEeH
Confidence 35666777889999999987 4788888888888654445443 33333 4677887777 99999986
No 399
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=30.35 E-value=90 Score=31.68 Aligned_cols=62 Identities=15% Similarity=0.233 Sum_probs=40.3
Q ss_pred CeEEEEecCCCCCCHH----HHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHhhcCCceEEEEEec
Q 010211 100 KTKIVCTIGPSTSSRE----MIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDT 165 (515)
Q Consensus 100 ~TKIi~TiGPss~~~e----~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~~~~~~~~~~i~I~lDL 165 (515)
+....+|+|....+++ ..+++.++|.+.+.|++.|++.+.-.+.++.||+ ..| ..+.|++|.
T Consensus 132 ~vp~y~~~~~~~~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~---a~G-~~~~l~vDa 197 (389)
T 2oz8_A 132 RVKAYASGLDFHLDDDAFVSLFSHAASIGYSAFKIKVGHRDFDRDLRRLELLKT---CVP-AGSKVMIDP 197 (389)
T ss_dssp EEEEEEECCBTTCCHHHHHHHHHHHHHTTCCEEEEECCCSSHHHHHHHHHHHHT---TSC-TTCEEEEEC
T ss_pred ceEEEEeCCCcCCCHHHHHHHHHHHHHhCCCEEEEccCCCCHHHHHHHHHHHHH---hhC-CCCeEEEEC
Confidence 4456666654222443 4466788999999999999887655566655554 455 445666665
No 400
>2wg5_A General control protein GCN4, proteasome-activating nucleotidase; transcription hydrolase complex, nucleotide-binding; 2.10A {Saccharomyces cerevisiae} PDB: 2wg6_A
Probab=30.30 E-value=2e+02 Score=24.26 Aligned_cols=31 Identities=13% Similarity=0.307 Sum_probs=20.3
Q ss_pred eEEecccccc--cccCcCCEEEEeC-CeeEEEEE
Q 010211 200 TVSVNYDDFV--NDVEVGDILLVDG-GMMSLAVK 230 (515)
Q Consensus 200 ~i~v~~~~l~--~~v~~Gd~IliDD-G~I~l~V~ 230 (515)
...|+...++ +.++||++|.++. ....+.+.
T Consensus 61 ~~~V~v~~~Vd~~~LkpG~rVaLn~~s~~Iv~iL 94 (109)
T 2wg5_A 61 KFVVNTSQYINEEELKPGARVALNQQTLAIVNVL 94 (109)
T ss_dssp EEEECBCTTSCTTTCCTTCEEEEETTTCCEEEEE
T ss_pred EEEEEcccccCHHHCCCCCEEEECCcceEeEEeC
Confidence 3445544443 5799999999997 55544444
No 401
>1vpz_A Carbon storage regulator homolog; CSRA-like fold, structural genomics, joint center for struct genomics, JCSG; HET: MSE; 2.05A {Pseudomonas aeruginosa} SCOP: b.151.1.1
Probab=30.08 E-value=70 Score=25.78 Aligned_cols=31 Identities=19% Similarity=0.325 Sum_probs=25.8
Q ss_pred cccccCcCCEEEEeCCeeEEEEEEEeCCeEEE
Q 010211 208 FVNDVEVGDILLVDGGMMSLAVKSKTKDLVKC 239 (515)
Q Consensus 208 l~~~v~~Gd~IliDDG~I~l~V~~~~~~~v~~ 239 (515)
|+-.=++|..|.|.| .|.++|.++.++.|+.
T Consensus 14 LvLtRK~GEsI~IGd-dI~ItVl~i~g~qVrL 44 (73)
T 1vpz_A 14 LILTRRVGETLMVGD-DVTVTVLGVKGNQVRI 44 (73)
T ss_dssp EEEEEETTCEEEETT-TEEEEEEEEETTEEEE
T ss_pred EEEEccCCCEEEeCC-CEEEEEEEEeCCEEEE
Confidence 444558999999988 8999999999988754
No 402
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=30.06 E-value=47 Score=33.24 Aligned_cols=43 Identities=21% Similarity=0.373 Sum_probs=33.8
Q ss_pred cCCCCCCHHHHHHHHHhC--CcEEEEecCCCChHHHHHHHHHHHH
Q 010211 107 IGPSTSSREMIWKLAEEG--MNVARLNMSHGDHASHQKTIDLVKE 149 (515)
Q Consensus 107 iGPss~~~e~i~~li~aG--m~v~RiN~SHg~~e~~~~~i~~ir~ 149 (515)
+|...+..+.++.++++| .+..-+|++||++....+.|+.+|+
T Consensus 101 ~g~~~~~~~~a~~~~~~g~~~~~i~i~~~~G~~~~~~~~i~~lr~ 145 (336)
T 1ypf_A 101 VGVKEDEYEFVQQLAAEHLTPEYITIDIAHGHSNAVINMIQHIKK 145 (336)
T ss_dssp ECCSHHHHHHHHHHHHTTCCCSEEEEECSSCCSHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHhcCCCCCEEEEECCCCCcHHHHHHHHHHHH
Confidence 555445567788899999 9999999999988777777777765
No 403
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=29.91 E-value=81 Score=32.26 Aligned_cols=67 Identities=16% Similarity=0.240 Sum_probs=39.7
Q ss_pred HHhhcchhcCCcEEEecccC------CHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh----cCeeEEcCCc
Q 010211 271 EDIKFGVDNQVDFYAVSFVK------DAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA----SDGAMVARGD 340 (515)
Q Consensus 271 ~dI~~al~~gvD~ValSfVr------sa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~----sDgImIgrgD 340 (515)
++.+.+.+.|+|+|.++--. ....+..+.+..+..+.++.||+- -||.+-.++++. +|+++|||.=
T Consensus 229 e~A~~a~~~GaD~I~vsn~GG~~~d~~~~~~~~L~~i~~av~~~ipVia~----GGI~~g~Dv~kaLalGA~aV~iGr~~ 304 (352)
T 3sgz_A 229 EDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMD----GGVRTGTDVLKALALGARCIFLGRPI 304 (352)
T ss_dssp HHHHHHHHTTCSEEEECCGGGTSSCSSCCHHHHHHHHHHHHTTSSEEEEE----SSCCSHHHHHHHHHTTCSEEEESHHH
T ss_pred HHHHHHHHcCCCEEEEeCCCCCccCCCccHHHHHHHHHHHhCCCCeEEEE----CCCCCHHHHHHHHHcCCCEEEECHHH
Confidence 45566778899999885311 112333444444434556888872 244444444443 8999999864
Q ss_pred c
Q 010211 341 L 341 (515)
Q Consensus 341 L 341 (515)
|
T Consensus 305 l 305 (352)
T 3sgz_A 305 L 305 (352)
T ss_dssp H
T ss_pred H
Confidence 4
No 404
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=29.90 E-value=35 Score=33.27 Aligned_cols=83 Identities=16% Similarity=0.179 Sum_probs=47.0
Q ss_pred hhHHHhhcchhc-CCcEEEecccCC----HHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHh---hcCeeEEcCC
Q 010211 268 KDWEDIKFGVDN-QVDFYAVSFVKD----AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIIS---ASDGAMVARG 339 (515)
Q Consensus 268 kD~~dI~~al~~-gvD~ValSfVrs----a~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~---~sDgImIgrg 339 (515)
.+.++++.+++. |+|+|++.. ++ .-|+....+++.....+..+|+ |+ |+.+-+++.. .+||++||.+
T Consensus 158 ~~~eE~~~A~~l~g~~iIGinn-r~l~t~~~d~~~~~~l~~~ip~~~~vIa--Es--GI~t~edv~~~~~~a~avLVG~a 232 (251)
T 1i4n_A 158 HSREDLEKVFSVIRPKIIGINT-RDLDTFEIKKNVLWELLPLVPDDTVVVA--ES--GIKDPRELKDLRGKVNAVLVGTS 232 (251)
T ss_dssp CSHHHHHHHHTTCCCSEEEEEC-BCTTTCCBCTTHHHHHGGGSCTTSEEEE--ES--CCCCGGGHHHHTTTCSEEEECHH
T ss_pred CCHHHHHHHHhcCCCCEEEEeC-cccccCCCCHHHHHHHHHhCCCCCEEEE--eC--CCCCHHHHHHHHHhCCEEEEcHH
Confidence 355668888888 999998864 22 1233444555555555666776 43 4444443333 3899999832
Q ss_pred cccccCCCCCHHHHHHHHHH
Q 010211 340 DLGAELPIEDVPLLQEDIIR 359 (515)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~ 359 (515)
= |..++...+.++++.
T Consensus 233 i----mr~~d~~~~~~~l~~ 248 (251)
T 1i4n_A 233 I----MKAENPRRFLEEMRA 248 (251)
T ss_dssp H----HHCSSHHHHHHHHHH
T ss_pred H----cCCcCHHHHHHHHHh
Confidence 1 112444445555443
No 405
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=29.79 E-value=2.5e+02 Score=29.11 Aligned_cols=24 Identities=13% Similarity=0.170 Sum_probs=17.8
Q ss_pred CCCHhhHHHh--------hcchhcCCcEEEec
Q 010211 264 SITDKDWEDI--------KFGVDNQVDFYAVS 287 (515)
Q Consensus 264 ~ltekD~~dI--------~~al~~gvD~ValS 287 (515)
.||..|++.+ +.|.+.|+|+|=+-
T Consensus 159 ~mt~~eI~~ii~~F~~AA~rA~~AGfDgVEIH 190 (419)
T 3l5a_A 159 AMSHEKINSIIQQYRDATLRAIKAGFDGVEIS 190 (419)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEC
Confidence 5788888776 24467899998763
No 406
>2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A*
Probab=29.51 E-value=64 Score=33.64 Aligned_cols=51 Identities=22% Similarity=0.277 Sum_probs=32.0
Q ss_pred CCHHHH-HHHHHhCCcEEEEecCCC---------ChHHHHHHHHHHHHHHhhcCCceEEEEEecC
Q 010211 112 SSREMI-WKLAEEGMNVARLNMSHG---------DHASHQKTIDLVKEYNSQFEDKAVAIMLDTK 166 (515)
Q Consensus 112 ~~~e~i-~~li~aGm~v~RiN~SHg---------~~e~~~~~i~~ir~~~~~~~~~~i~I~lDL~ 166 (515)
...+.| +.|.+.|+|++||-++.. +.+..+.+.+.| +..++.| +.+++|+-
T Consensus 66 ~~~~di~~~l~~~G~N~VRl~v~w~~~~p~~g~~~~~~l~~l~~~v-~~a~~~G---i~vildlH 126 (481)
T 2osx_A 66 FTEADLAREYADMGTNFVRFLISWRSVEPAPGVYDQQYLDRVEDRV-GWYAERG---YKVMLDMH 126 (481)
T ss_dssp CCHHHHHHHHHHHCCCEEEEEECHHHHCSBTTBCCHHHHHHHHHHH-HHHHHTT---CEEEEEEC
T ss_pred ccHHHHHHHHHHCCCCEEEEeCcHHHcCCCCCCcCHHHHHHHHHHH-HHHHHCC---CEEEEEcc
Confidence 467788 899999999999987621 122233332233 3334555 77888864
No 407
>1vhk_A Hypothetical protein YQEU; structural genomics, unknown function; 2.60A {Bacillus subtilis} SCOP: b.122.1.2 c.116.1.5
Probab=29.51 E-value=1.8e+02 Score=28.27 Aligned_cols=71 Identities=20% Similarity=0.265 Sum_probs=41.6
Q ss_pred ccCcCCEEEEeCC---eeEEEEEEEeCCeEEEEEeeCcEeccCc--eeeeCCCccCCCCCCHhhHHHhhcchhcCCcEEE
Q 010211 211 DVEVGDILLVDGG---MMSLAVKSKTKDLVKCIVVDGGELKSRR--HLNVRGKSANLPSITDKDWEDIKFGVDNQVDFYA 285 (515)
Q Consensus 211 ~v~~Gd~IliDDG---~I~l~V~~~~~~~v~~~V~~gG~L~s~K--gVnlpg~~~~lp~ltekD~~dI~~al~~gvD~Va 285 (515)
-+++||.|.+-|| ....+|.+++++.+.+++..--...... .|.| ...+|. .++-..-|+.+.+.|++-|.
T Consensus 36 Rl~~Gd~i~l~dg~G~~~~a~I~~~~~~~~~~~i~~~~~~~~e~~~~v~L---~~al~K-~~r~e~ilqkatELGV~~I~ 111 (268)
T 1vhk_A 36 RMNEGDQIICCSQDGFEAKCELQSVSKDKVSCLVIEWTNENRELPIKVYI---ASGLPK-GDKLEWIIQKGTELGAHAFI 111 (268)
T ss_dssp CCCTTCEEEEECTTSCEEEEEEEEECSSEEEEEEEEECCCCCCCSSEEEE---EEECCS-TTHHHHHHHHHHHTTCCEEE
T ss_pred cCCCCCEEEEEeCCCCEEEEEEEEecCCEEEEEEEEEeccCCCCCccEEE---EEeeec-CccHHHHHHHHHHhCcCEEE
Confidence 4588999998553 4566788888888888776421111111 1111 112222 23333456889999999654
No 408
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}
Probab=29.47 E-value=59 Score=32.00 Aligned_cols=47 Identities=11% Similarity=0.129 Sum_probs=37.0
Q ss_pred hhcHHHHHhhcCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEe
Q 010211 321 IPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVAT 372 (515)
Q Consensus 321 veNldeIl~~sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivAT 372 (515)
.+-++|+++.+|++.|++|=|. ++..+.....++.+++.++|+++=-
T Consensus 49 ~~e~~e~~~~a~alvIn~G~l~-----~~~~~~~~~a~~~a~~~~~PvVlDP 95 (273)
T 3dzv_A 49 PREFPQMFQQTSALVLNLGHLS-----QEREQSLLAASDYARQVNKLTVVDL 95 (273)
T ss_dssp GGGHHHHHTTCSEEEEECCSCC-----HHHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHHCCeEEEecCCCC-----hHHHHHHHHHHHHHHHcCCcEEEch
Confidence 5667888889999999988652 3455677788888999999998743
No 409
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=29.43 E-value=1.2e+02 Score=30.25 Aligned_cols=44 Identities=11% Similarity=0.184 Sum_probs=33.0
Q ss_pred hhcHHHHHhh-cCeeEEcCCcccccCCCCCHHHHHHHHHHHHHh-cCCcEEE
Q 010211 321 IPNLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRS-MQKPVIV 370 (515)
Q Consensus 321 veNldeIl~~-sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~-aGKPviv 370 (515)
.+.++.+.+. .|+|||| +.|+..+.....++++++++ ..+|++.
T Consensus 56 ~~~~~~~~~sGtDai~VG------S~~vt~~~~~~~~~v~~ik~~~~lPvil 101 (286)
T 3vk5_A 56 VEKAAELTRLGFAAVLLA------STDYESFESHMEPYVAAVKAATPLPVVL 101 (286)
T ss_dssp HHHHHHHHHTTCSCEEEE------CSCCSSHHHHHHHHHHHHHHHCSSCEEE
T ss_pred HHHHHHHHhcCCCEEEEc------cCCCCcchHHHHHHHHHHHHhCCCCEEE
Confidence 3445666665 8999998 44555566777888888888 8999997
No 410
>1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3
Probab=29.29 E-value=71 Score=31.23 Aligned_cols=53 Identities=21% Similarity=0.263 Sum_probs=33.8
Q ss_pred CCCHHHHHHHHHhCCcEEEEecCCC---C---h----HHHHHHHHHHHHHHhhcCCceEEEEEecC
Q 010211 111 TSSREMIWKLAEEGMNVARLNMSHG---D---H----ASHQKTIDLVKEYNSQFEDKAVAIMLDTK 166 (515)
Q Consensus 111 s~~~e~i~~li~aGm~v~RiN~SHg---~---~----e~~~~~i~~ir~~~~~~~~~~i~I~lDL~ 166 (515)
....+.++.|-+.|+|++||-++.. . + +...+.++.+=+..++.| +.+++|+-
T Consensus 36 ~~~~~d~~~i~~~G~n~vRi~i~~~~~~~~~~p~~~~~~~~~~ld~~v~~a~~~G---i~vildlh 98 (341)
T 1vjz_A 36 NFKEEDFLWMAQWDFNFVRIPMCHLLWSDRGNPFIIREDFFEKIDRVIFWGEKYG---IHICISLH 98 (341)
T ss_dssp CCCHHHHHHHHHTTCCEEEEEEEGGGTSCSSCTTCCCGGGHHHHHHHHHHHHHHT---CEEEEEEE
T ss_pred CCCHHHHHHHHHcCCCEEEeeCCHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHcC---CEEEEEec
Confidence 3568899999999999999976421 1 1 223333444444445556 67788863
No 411
>1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3
Probab=29.16 E-value=1.1e+02 Score=30.14 Aligned_cols=50 Identities=20% Similarity=0.293 Sum_probs=32.0
Q ss_pred HHHHHHHHHhCCcEEEEe-cCCCC----------h-HHHHHHHHHHHHHHhhcCCceEEEEEecC
Q 010211 114 REMIWKLAEEGMNVARLN-MSHGD----------H-ASHQKTIDLVKEYNSQFEDKAVAIMLDTK 166 (515)
Q Consensus 114 ~e~i~~li~aGm~v~RiN-~SHg~----------~-e~~~~~i~~ir~~~~~~~~~~i~I~lDL~ 166 (515)
.+.++.|-+.|+|++|+- |+++. . +..-+.++.+=+..++.| +.+++||-
T Consensus 45 ~~dl~~~k~~G~N~vR~~~~~~~~w~~~~~~~g~~~~~~~~~ld~~i~~a~~~G---i~vil~l~ 106 (373)
T 1rh9_A 45 TNTFQQASKYKMNVARTWAFSHGGSRPLQSAPGVYNEQMFQGLDFVISEAKKYG---IHLIMSLV 106 (373)
T ss_dssp HHHHHHHHHTTCCEEEEESSCSSSSSCSEEETTEECHHHHHHHHHHHHHHHHTT---CEEEEECC
T ss_pred HHHHHHHHHCCCCEEEECeecCCCCccccCCCCccCHHHHHHHHHHHHHHHHCC---CEEEEEec
Confidence 557888999999999996 44431 1 223344444445556666 77777764
No 412
>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12
Probab=29.10 E-value=1.8e+02 Score=27.43 Aligned_cols=103 Identities=17% Similarity=0.176 Sum_probs=55.0
Q ss_pred hhHH-HhhcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecChh--h--hhcHHHHHhhc-CeeEEcCCcc
Q 010211 268 KDWE-DIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESAD--S--IPNLHSIISAS-DGAMVARGDL 341 (515)
Q Consensus 268 kD~~-dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~--a--veNldeIl~~s-DgImIgrgDL 341 (515)
.|.+ .++.+-+.|++.+.++- .+.++...+.++.++. .++...+-+=-.. . -+.++++.+.. +.-.+|-|..
T Consensus 27 ~~~~~~l~~~~~~GV~~~v~~~-~~~~~~~~~~~l~~~~-p~i~~~~G~hP~~~~~~~~~~~~~l~~~~~~~~~~~iGe~ 104 (268)
T 1j6o_A 27 DDRNAVISSFEENNIEFVVNVG-VNLEDSKKSLDLSKTS-DRIFCSVGVHPHDAKEVPEDFIEHLEKFAKDEKVVAIGET 104 (268)
T ss_dssp TTHHHHHHTTTTTTEEEEEEEC-SSHHHHHHHHHHHTTC-TTEEEEECCCGGGGGGCCTTHHHHHHHHTTSTTEEEEEEE
T ss_pred cCHHHHHHHHHHcCCCEEEEeC-CCHHHHHHHHHHHHHC-CCEEEEEeeccccccccCHHHHHHHHHHhccCCEEEEEcc
Confidence 3444 44566678998766543 3577777777765543 3443333331110 0 12244444332 2223344555
Q ss_pred cccCCCC-CHHHHH----HHHHHHHHhcCCcEEEEe
Q 010211 342 GAELPIE-DVPLLQ----EDIIRRCRSMQKPVIVAT 372 (515)
Q Consensus 342 g~elg~e-~v~~aq----k~Ii~~c~~aGKPvivAT 372 (515)
|+..... .-...| ..+++.|.+.|+|+++-+
T Consensus 105 Gld~~~~~~~~~~q~~~f~~~~~~a~~~~lPv~iH~ 140 (268)
T 1j6o_A 105 GLDFFRNISPAEVQKRVFVEQIELAGKLNLPLVVHI 140 (268)
T ss_dssp EEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred ccCCcccCCChHHHHHHHHHHHHHHHHhCCCEEEEe
Confidence 5555431 112333 677889999999999965
No 413
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=29.06 E-value=2.2e+02 Score=28.20 Aligned_cols=95 Identities=15% Similarity=0.060 Sum_probs=53.9
Q ss_pred HHHHhh-cCeeEEcCCcc--cccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCc
Q 010211 325 HSIISA-SDGAMVARGDL--GAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGAD 401 (515)
Q Consensus 325 deIl~~-sDgImIgrgDL--g~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D 401 (515)
+-.++. +|||++. |=- +..+..++-..+.+.+++.++ -..||+..| +.-|+.-+...-.+-..|+|
T Consensus 40 ~~li~~Gv~Gl~v~-GtTGE~~~Ls~eEr~~v~~~~v~~~~-grvpViaGv---------g~~t~~ai~la~~A~~~Gad 108 (316)
T 3e96_A 40 DRIVDNGIDVIVPC-GNTSEFYALSLEEAKEEVRRTVEYVH-GRALVVAGI---------GYATSTAIELGNAAKAAGAD 108 (316)
T ss_dssp HHHHTTTCCEECTT-SGGGTGGGSCHHHHHHHHHHHHHHHT-TSSEEEEEE---------CSSHHHHHHHHHHHHHHTCS
T ss_pred HHHHHcCCCEEEeC-ccccCcccCCHHHHHHHHHHHHHHhC-CCCcEEEEe---------CcCHHHHHHHHHHHHhcCCC
Confidence 333344 8999885 211 112222344444444444443 246888754 23343335556667778999
Q ss_pred EEeecccccCCCCHHHHHHHHHHHHHHHh
Q 010211 402 AVMLSGETAHGKFPLKAVKVMHTVALRTE 430 (515)
Q Consensus 402 ~vmLs~ETa~G~yPveaV~~m~~I~~~aE 430 (515)
++|+..=--...-+-+.++....|+..+.
T Consensus 109 avlv~~P~y~~~s~~~l~~~f~~va~a~~ 137 (316)
T 3e96_A 109 AVMIHMPIHPYVTAGGVYAYFRDIIEALD 137 (316)
T ss_dssp EEEECCCCCSCCCHHHHHHHHHHHHHHHT
T ss_pred EEEEcCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 99985221122235678889999998886
No 414
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus}
Probab=28.99 E-value=51 Score=33.32 Aligned_cols=51 Identities=24% Similarity=0.330 Sum_probs=32.8
Q ss_pred HHHHHHHHhCCcEEEEecCCCC--hHHHHHHHHHHHHHHhhcCCceEEEEEecCCC
Q 010211 115 EMIWKLAEEGMNVARLNMSHGD--HASHQKTIDLVKEYNSQFEDKAVAIMLDTKGP 168 (515)
Q Consensus 115 e~i~~li~aGm~v~RiN~SHg~--~e~~~~~i~~ir~~~~~~~~~~i~I~lDL~GP 168 (515)
+.|+.|.+.|+|++|+-++-+. .+...+.++.+=+...+.| +.+++|+-+.
T Consensus 58 ~~i~~lk~~G~N~VRip~~~~~~~~~~~l~~ld~~v~~a~~~G---iyVIlDlH~~ 110 (345)
T 3jug_A 58 TAIPAIAEQGANTIRIVLSDGGQWEKDDIDTVREVIELAEQNK---MVAVVEVHDA 110 (345)
T ss_dssp HHHHHHHHTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHTTT---CEEEEEECTT
T ss_pred HHHHHHHHcCCCEEEEEecCCCccCHHHHHHHHHHHHHHHHCC---CEEEEEeccC
Confidence 5788999999999999876432 1112233333334444555 7788898764
No 415
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=28.98 E-value=1.8e+02 Score=27.00 Aligned_cols=65 Identities=15% Similarity=0.142 Sum_probs=38.1
Q ss_pred hhcchhcCCcEEEec-----ccCCHHHHHHHHHHHHhcCCCceEEE--EecChhhhhcHHHHHhh-cCeeEEcCCccc
Q 010211 273 IKFGVDNQVDFYAVS-----FVKDAKVVHELKDYLKSCNADIHVIV--KIESADSIPNLHSIISA-SDGAMVARGDLG 342 (515)
Q Consensus 273 I~~al~~gvD~ValS-----fVrsa~dv~~vr~~l~~~~~~i~IIa--KIEt~~aveNldeIl~~-sDgImIgrgDLg 342 (515)
.+...+.|+|++.+. |.....+...+++.-+. -++++++ .|.++ +.+++.++. +|++++|+..|.
T Consensus 36 a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~--~~ipvi~~ggI~~~---~~~~~~~~~Gad~V~lg~~~l~ 108 (253)
T 1thf_D 36 GKFYSEIGIDELVFLDITASVEKRKTMLELVEKVAEQ--IDIPFTVGGGIHDF---ETASELILRGADKVSINTAAVE 108 (253)
T ss_dssp HHHHHHTTCCEEEEEESSCSSSHHHHHHHHHHHHHTT--CCSCEEEESSCCSH---HHHHHHHHTTCSEEEESHHHHH
T ss_pred HHHHHHcCCCEEEEECCchhhcCCcccHHHHHHHHHh--CCCCEEEeCCCCCH---HHHHHHHHcCCCEEEEChHHHh
Confidence 345567899988664 22222233334443322 2466666 46654 446666666 999999987663
No 416
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua}
Probab=28.32 E-value=1.2e+02 Score=28.73 Aligned_cols=64 Identities=13% Similarity=0.153 Sum_probs=38.9
Q ss_pred HHhcCCCceEEEEecChhhhhcHHHHHhhcCeeEEcCCc-cccc-CC---C-------CCHHHHHHHHHHHHHhcCCcEE
Q 010211 302 LKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGD-LGAE-LP---I-------EDVPLLQEDIIRRCRSMQKPVI 369 (515)
Q Consensus 302 l~~~~~~i~IIaKIEt~~aveNldeIl~~sDgImIgrgD-Lg~e-lg---~-------e~v~~aqk~Ii~~c~~aGKPvi 369 (515)
+.++|....++.-.+. .+ ++++++..|||++.-|. +.-+ +| . +.-......+++.+.+.|||+.
T Consensus 37 l~~aG~~pv~lp~~~~---~~-~~~~l~~~DGlil~GG~~v~P~~yg~~~~~~~~~~~~~rd~~~~~lir~a~~~~~PiL 112 (254)
T 3fij_A 37 IQKVGGFPIALPIDDP---ST-AVQAISLVDGLLLTGGQDITPQLYLEEPSQEIGAYFPPRDSYEIALVRAALDAGKPIF 112 (254)
T ss_dssp HHHHTCEEEEECCCCG---GG-HHHHHHTCSEEEECCCSCCCGGGGTCCCCTTCCCCCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred HHHCCCEEEEEeCCCc---hH-HHHHHhhCCEEEECCCCCCChhhcCCccCcccCCcChhhhHHHHHHHHHHHHcCCCEE
Confidence 3445665555443332 23 77888889999998772 1111 11 1 1223456788899999999984
No 417
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=28.07 E-value=3.5e+02 Score=27.10 Aligned_cols=111 Identities=16% Similarity=0.208 Sum_probs=73.3
Q ss_pred CCCceEEEEecChhhhhcHHHHHhh-cCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccc---ccccc-
Q 010211 306 NADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNML---ESMID- 380 (515)
Q Consensus 306 ~~~i~IIaKIEt~~aveNldeIl~~-sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmL---eSMi~- 380 (515)
...++|..........+.+.+-++. .+-+||. .| ++++++=...-+++++.|++.|..|=.==-.+ |.-+.
T Consensus 72 ~~~VPValHLDHg~~~e~~~~ai~~GFtSVMiD---gS-~~p~eeNi~~Tk~vv~~ah~~gvsVEaELG~igG~Ed~~~~ 147 (307)
T 3n9r_A 72 YPHIPVALHLDHGTTFESCEKAVKAGFTSVMID---AS-HHAFEENLELTSKVVKMAHNAGVSVEAELGRLMGIEDNISV 147 (307)
T ss_dssp STTSCEEEEEEEECSHHHHHHHHHHTCSEEEEC---CT-TSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCCCC------
T ss_pred cCCCcEEEECCCCCCHHHHHHHHHhCCCcEEEE---CC-CCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCccc
Confidence 3578999999887766555554444 7899995 33 34778878888999999999998873210001 10000
Q ss_pred ------CCCcChHHHhHHHHHH-HhCCcEEeecccccCCCCH-----HHHHHHHHHH
Q 010211 381 ------HPTPTRAEVSDIAIAV-REGADAVMLSGETAHGKFP-----LKAVKVMHTV 425 (515)
Q Consensus 381 ------~~~PtrAEv~DvanaV-~~G~D~vmLs~ETa~G~yP-----veaV~~m~~I 425 (515)
-.+|. +...++ .-|+|++-.+--|+.|.|+ .--...|.+|
T Consensus 148 ~~~~~~yT~Pe-----ea~~Fv~~TgvD~LAvaiGt~HG~Yk~~~~p~Ld~~~L~~I 199 (307)
T 3n9r_A 148 DEKDAVLVNPK-----EAEQFVKESQVDYLAPAIGTSHGAFKFKGEPKLDFERLQEV 199 (307)
T ss_dssp ----CCSCCHH-----HHHHHHHHHCCSEEEECSSCCSSSBCCSSSCCCCHHHHHHH
T ss_pred ccccccCCCHH-----HHHHHHHHHCCCEEEEecCCcccccCCCCCCccCHHHHHHH
Confidence 01222 334555 3799999999999999995 3455666666
No 418
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=28.02 E-value=72 Score=30.84 Aligned_cols=57 Identities=12% Similarity=0.090 Sum_probs=33.9
Q ss_pred eEEEEecCCC-C-CCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHhhcCCceEEE
Q 010211 101 TKIVCTIGPS-T-SSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAI 161 (515)
Q Consensus 101 TKIi~TiGPs-s-~~~e~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~~~~~~~~~~i~I 161 (515)
++...|.|-. - .+.+.++.|.++|.|++=+-.|.|... ++.++.+++..+ .. .|+-+
T Consensus 8 ~~~~i~~gDP~~~~t~~~~~~l~~~GaD~ielG~S~Gvt~--~~~~~~v~~ir~-~~-~Pivl 66 (240)
T 1viz_A 8 EWKHVFKLDPNKDLPDEQLEILCESGTDAVIIGGSDGVTE--DNVLRMMSKVRR-FL-VPCVL 66 (240)
T ss_dssp GCCEEEEECTTSCCCHHHHHHHHTSCCSEEEECC----CH--HHHHHHHHHHTT-SS-SCEEE
T ss_pred cceEEEeeCCCccccHHHHHHHHHcCCCEEEECCCCCCCH--HHHHHHHHHhhC-cC-CCEEE
Confidence 3444555443 3 678999999999999999999998764 234444554433 33 44443
No 419
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=27.88 E-value=4.1e+02 Score=25.49 Aligned_cols=141 Identities=19% Similarity=0.189 Sum_probs=75.3
Q ss_pred CHhhH-HHhhcchhcCCcEEEe--cccC---CHHHHHHHHHHHHhcCCCceEEEEecCh-hhh----------hcHHHHH
Q 010211 266 TDKDW-EDIKFGVDNQVDFYAV--SFVK---DAKVVHELKDYLKSCNADIHVIVKIESA-DSI----------PNLHSII 328 (515)
Q Consensus 266 tekD~-~dI~~al~~gvD~Val--SfVr---sa~dv~~vr~~l~~~~~~i~IIaKIEt~-~av----------eNldeIl 328 (515)
|.+|. +.++.+...|+|.|=+ =|.+ +.+++.+.-..+.+.-.+.++|.-+=|. ||= +-+.+++
T Consensus 30 t~~e~l~~a~~~~~~~aD~vElR~D~l~~~~~~~~v~~~l~~lr~~~~~lPiI~T~Rt~~EGG~~~~~~~~~~~ll~~~~ 109 (258)
T 4h3d_A 30 NKKDIIKEAKELKDACLDIIEWRVDFFENVENIKEVKEVLYELRSYIHDIPLLFTFRSVVEGGEKLISRDYYTTLNKEIS 109 (258)
T ss_dssp SHHHHHHHHHHHTTSSCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCTTSCEEEECCCGGGTCSCCCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhhcCCCEEEEeeccccccCCHHHHHHHHHHHHHhcCCCCEEEEEechhhCCCCCCCHHHHHHHHHHHH
Confidence 44442 4445556667776533 2233 3444444333344434467788777443 111 1112222
Q ss_pred hh--cCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHH-hHHHHHHHhCCcEEee
Q 010211 329 SA--SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEV-SDIAIAVREGADAVML 405 (515)
Q Consensus 329 ~~--sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv-~DvanaV~~G~D~vmL 405 (515)
.. +|.|= + |+. .-....+++++.+++.|..+|.+-+=+ ..+|+..|+ .....+...|+|.+=+
T Consensus 110 ~~~~~d~iD-----v--El~--~~~~~~~~l~~~a~~~~~kiI~S~Hdf-----~~TP~~~el~~~~~~~~~~gaDIvKi 175 (258)
T 4h3d_A 110 NTGLVDLID-----V--ELF--MGDEVIDEVVNFAHKKEVKVIISNHDF-----NKTPKKEEIVSRLCRMQELGADLPKI 175 (258)
T ss_dssp HTTCCSEEE-----E--EGG--GCHHHHHHHHHHHHHTTCEEEEEEEES-----SCCCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred hcCCchhhH-----H--hhh--ccHHHHHHHHHHHHhCCCEEEEEEecC-----CCCCCHHHHHHHHHHHHHhCCCEEEE
Confidence 21 23322 1 222 223467889999999999999876432 457887784 4566777889998766
Q ss_pred cccccCCCCHHHHHHHHH
Q 010211 406 SGETAHGKFPLKAVKVMH 423 (515)
Q Consensus 406 s~ETa~G~yPveaV~~m~ 423 (515)
.. .-+-+-+..+.|.
T Consensus 176 a~---~~~~~~D~l~Ll~ 190 (258)
T 4h3d_A 176 AV---MPQNEKDVLVLLE 190 (258)
T ss_dssp EE---CCSSHHHHHHHHH
T ss_pred EE---ccCCHHHHHHHHH
Confidence 31 2233445555544
No 420
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=27.88 E-value=96 Score=30.93 Aligned_cols=86 Identities=15% Similarity=0.128 Sum_probs=54.9
Q ss_pred hhhcHHHHHhh--cCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCC-CcChHHHhHHHHHH
Q 010211 320 SIPNLHSIISA--SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHP-TPTRAEVSDIAIAV 396 (515)
Q Consensus 320 aveNldeIl~~--sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~-~PtrAEv~DvanaV 396 (515)
...+++++++- +|+|+|+ .| ......++.+|-++||+|++ ..| ..+.+|...+..+.
T Consensus 76 ~~~~~~~ll~~~~vD~V~I~-------tp----~~~H~~~~~~al~aGkhVl~---------EKPla~~~~ea~~l~~~a 135 (361)
T 3u3x_A 76 RIATAEEILEDENIGLIVSA-------AV----SSERAELAIRAMQHGKDVLV---------DKPGMTSFDQLAKLRRVQ 135 (361)
T ss_dssp EESCHHHHHTCTTCCEEEEC-------CC----HHHHHHHHHHHHHTTCEEEE---------ESCSCSSHHHHHHHHHHH
T ss_pred ccCCHHHHhcCCCCCEEEEe-------CC----hHHHHHHHHHHHHCCCeEEE---------eCCCCCCHHHHHHHHHHH
Confidence 46789999986 8999996 12 23557788899999999998 555 56777777776665
Q ss_pred HhCCcEEeecccccCCCCHHHHHHHHHHHHHH
Q 010211 397 REGADAVMLSGETAHGKFPLKAVKVMHTVALR 428 (515)
Q Consensus 397 ~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~ 428 (515)
.. ....+.-+..---.+| +++.+++++..
T Consensus 136 ~~-~g~~l~v~~~~R~~~p--~~~~~k~~i~~ 164 (361)
T 3u3x_A 136 AE-TGRIFSILYSEHFESP--ATVKAGELVAA 164 (361)
T ss_dssp HT-TCCCEEEECHHHHTCH--HHHHHHHHHHT
T ss_pred HH-cCCEEEEechHhhCCH--HHHHHHHHHHc
Confidence 53 3333322111111123 56667776654
No 421
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=27.84 E-value=1.4e+02 Score=30.46 Aligned_cols=124 Identities=14% Similarity=0.109 Sum_probs=0.0
Q ss_pred CCHhhHHHh--------hcchhcCCcEEEe-------------cccCCHHH-------------HHHHHHHHHhcCCCce
Q 010211 265 ITDKDWEDI--------KFGVDNQVDFYAV-------------SFVKDAKV-------------VHELKDYLKSCNADIH 310 (515)
Q Consensus 265 ltekD~~dI--------~~al~~gvD~Val-------------SfVrsa~d-------------v~~vr~~l~~~~~~i~ 310 (515)
||..|++.+ +.+.+.|+|+|=+ |..+...| ++-++..-+..+.+ .
T Consensus 157 mt~~eI~~~i~~f~~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~-~ 235 (376)
T 1icp_A 157 LTTDEIPQIVNEFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSD-R 235 (376)
T ss_dssp CCTTTHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGG-G
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCC-c
Q ss_pred EEEEe---------cChhhhhcHHHHHhh-----cCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEecccc
Q 010211 311 VIVKI---------ESADSIPNLHSIISA-----SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLE 376 (515)
Q Consensus 311 IIaKI---------Et~~aveNldeIl~~-----sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLe 376 (515)
|..|| .....++..-++++. +|.|-+.-+.....-+...-....+++-+.. +.|++...
T Consensus 236 V~vrls~~~~~~g~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~vr~~~---~iPvi~~G---- 308 (376)
T 1icp_A 236 VGIRISPFAHYNEAGDTNPTALGLYMVESLNKYDLAYCHVVEPRMKTAWEKIECTESLVPMRKAY---KGTFIVAG---- 308 (376)
T ss_dssp EEEEECTTCCTTTCCCSCHHHHHHHHHHHHGGGCCSEEEEECCSCCC------CCCCSHHHHHHC---CSCEEEES----
T ss_pred eEEEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCcccCCCCccccHHHHHHHHHHc---CCCEEEeC----
Q ss_pred ccccCCCcChHHHhHHHHHHHhC-CcEEee
Q 010211 377 SMIDHPTPTRAEVSDIAIAVREG-ADAVML 405 (515)
Q Consensus 377 SMi~~~~PtrAEv~DvanaV~~G-~D~vmL 405 (515)
.- .|..++ .++..| +|.|++
T Consensus 309 ---~i-~~~~a~-----~~l~~g~aD~V~~ 329 (376)
T 1icp_A 309 ---GY-DREDGN-----RALIEDRADLVAY 329 (376)
T ss_dssp ---SC-CHHHHH-----HHHHTTSCSEEEE
T ss_pred ---CC-CHHHHH-----HHHHCCCCcEEee
No 422
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=27.71 E-value=2.1e+02 Score=29.19 Aligned_cols=90 Identities=17% Similarity=0.204 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhcCCCceEEEE-ecChhhhhcHHHHHhh-cCeeEEcCCcccccC-----------------CCCCHHHH
Q 010211 293 KVVHELKDYLKSCNADIHVIVK-IESADSIPNLHSIISA-SDGAMVARGDLGAEL-----------------PIEDVPLL 353 (515)
Q Consensus 293 ~dv~~vr~~l~~~~~~i~IIaK-IEt~~aveNldeIl~~-sDgImIgrgDLg~el-----------------g~e~v~~a 353 (515)
+.+..+++.. +++|++| +-.-...+......+. +|+|.|+=. -|..+ |++.+..+
T Consensus 196 ~~I~~l~~~~-----~~PVivK~vg~g~s~e~A~~l~~aGad~I~V~g~-GGt~~a~ie~~r~~~~~~~~~~g~pt~~~L 269 (365)
T 3sr7_A 196 KHLSDYAKKL-----QLPFILKEVGFGMDVKTIQTAIDLGVKTVDISGR-GGTSFAYIENRRGGNRSYLNQWGQTTAQVL 269 (365)
T ss_dssp HHHHHHHHHC-----CSCEEEEECSSCCCHHHHHHHHHHTCCEEECCCB-C--------------CGGGTTCSCBHHHHH
T ss_pred HHHHHHHHhh-----CCCEEEEECCCCCCHHHHHHHHHcCCCEEEEeCC-CCcccchhhccccccccccccccccHHHHH
Q ss_pred HHHHHHHHHhc--CCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEee
Q 010211 354 QEDIIRRCRSM--QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVML 405 (515)
Q Consensus 354 qk~Ii~~c~~a--GKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmL 405 (515)
. .+++. ..|++. ..+.-+ -.|++.++..|+|+|++
T Consensus 270 ~-----~v~~~~~~ipvia---------~GGI~~---g~Dv~KaLalGAdaV~i 306 (365)
T 3sr7_A 270 L-----NAQPLMDKVEILA---------SGGIRH---PLDIIKALVLGAKAVGL 306 (365)
T ss_dssp H-----HHGGGTTTSEEEE---------CSSCCS---HHHHHHHHHHTCSEEEE
T ss_pred H-----HHHHhcCCCeEEE---------eCCCCC---HHHHHHHHHcCCCEEEE
No 423
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=27.63 E-value=2.4e+02 Score=30.99 Aligned_cols=23 Identities=22% Similarity=0.196 Sum_probs=16.4
Q ss_pred CCCHhhHHHh--------hcchhcCCcEEEe
Q 010211 264 SITDKDWEDI--------KFGVDNQVDFYAV 286 (515)
Q Consensus 264 ~ltekD~~dI--------~~al~~gvD~Val 286 (515)
.||..|++.+ +.+.+.|+|+|=+
T Consensus 138 ~~t~~eI~~~i~~f~~aA~~a~~aGfDgVEi 168 (729)
T 1o94_A 138 EMDLSDIAQVQQFYVDAAKRSRDAGFDIVYV 168 (729)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEE
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 5788887665 2345689999876
No 424
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=27.52 E-value=3e+02 Score=27.58 Aligned_cols=112 Identities=18% Similarity=0.250 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh-cCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEE
Q 010211 293 KVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (515)
Q Consensus 293 ~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivA 371 (515)
+.+..+...+.+ .+++|..........+.+.+-++. ..-+|+. +-++++++=...-+++++.|++.|..|=.=
T Consensus 59 ~~~~~~v~~~a~--~~VPValHlDHg~~~e~~~~ai~~GFtSVMiD----gS~~p~eENi~~Tk~vv~~ah~~gvsVEaE 132 (305)
T 1rvg_A 59 ALTLMAVELAKE--ARVPVAVHLDHGSSYESVLRALRAGFTSVMID----KSHEDFETNVRETRRVVEAAHAVGVTVEAE 132 (305)
T ss_dssp HHHHHHHHHHHH--CSSCEEEEEEEECSHHHHHHHHHTTCSEEEEC----CTTSCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHh--CCCcEEEECCCCCCHHHHHHHHHcCCCeeeeC----CCCCCHHHHHHHHHHHHHHHHHcCCEEEEE
Q ss_pred eccccccccC----------CCcChHHHhHHHHHHH-hCCcEEeecccccCCCCH
Q 010211 372 TNMLESMIDH----------PTPTRAEVSDIAIAVR-EGADAVMLSGETAHGKFP 415 (515)
Q Consensus 372 TqmLeSMi~~----------~~PtrAEv~DvanaV~-~G~D~vmLs~ETa~G~yP 415 (515)
=-.+-.-... .+|..|+ .++. -|+|++-.+--|+.|.|+
T Consensus 133 LG~vgg~Ed~~~~~~~~~~yT~Peea~-----~Fv~~TgvD~LAvaiGt~HG~Yk 182 (305)
T 1rvg_A 133 LGRLAGIEEHVAVDEKDALLTNPEEAR-----IFMERTGADYLAVAIGTSHGAYK 182 (305)
T ss_dssp ESCCCCSCC------CCTTCCCHHHHH-----HHHHHHCCSEEEECSSCCSSSBC
T ss_pred EeeccCccCCccccccccccCCHHHHH-----HHHHHHCCCEEEEecCccccccC
No 425
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=27.50 E-value=3.3e+02 Score=26.28 Aligned_cols=139 Identities=14% Similarity=0.062 Sum_probs=75.8
Q ss_pred CCCHhhHHHhhcchhcCCcEEEec-c-c-----------CCHHHH-HHHHHHHHhcCCCceEEEEecChhh---hhcHHH
Q 010211 264 SITDKDWEDIKFGVDNQVDFYAVS-F-V-----------KDAKVV-HELKDYLKSCNADIHVIVKIESADS---IPNLHS 326 (515)
Q Consensus 264 ~ltekD~~dI~~al~~gvD~ValS-f-V-----------rsa~dv-~~vr~~l~~~~~~i~IIaKIEt~~a---veNlde 326 (515)
.++-+|.--.+.+-+.|+|.|.+| + + -+-+++ ..++..... -+++|++=+|+-=+ ++|...
T Consensus 24 ~~~ayD~~sA~~~~~aG~dai~vg~~s~a~~~G~pD~~~vt~~em~~~~~~I~r~--~~~pviaD~~~Gyg~~~~~~~~~ 101 (255)
T 2qiw_A 24 LPTVWDTWSAGLVEEAGFSGLTIGSHPVADATGSSDGENMNFADYMAVVKKITSA--VSIPVSVDVESGYGLSPADLIAQ 101 (255)
T ss_dssp CCEESSHHHHHHHHHTTCSCEEECHHHHHHHTTCCTTTCSCHHHHHHHHHHHHHH--CSSCEEEECTTCTTCCHHHHHHH
T ss_pred EecCcCHHHHHHHHHcCCCEEEEChHHHHHhCCCCCCCCcCHHHHHHHHHHHHhc--CCCCEEeccCCCcCcHHHHHHHH
Confidence 445667655555556789988776 2 1 111111 112222222 24789999986432 778888
Q ss_pred HHhh-cCeeEEcCCcc--ccc-CCCCCHHHHHHHHHHHHHhcCCcEEE--EeccccccccCCC-cChHH--HhHHHHHHH
Q 010211 327 IISA-SDGAMVARGDL--GAE-LPIEDVPLLQEDIIRRCRSMQKPVIV--ATNMLESMIDHPT-PTRAE--VSDIAIAVR 397 (515)
Q Consensus 327 Il~~-sDgImIgrgDL--g~e-lg~e~v~~aqk~Ii~~c~~aGKPviv--ATqmLeSMi~~~~-PtrAE--v~DvanaV~ 397 (515)
+++. ++||-|-=+.- +-+ ++.+++..-.+.+.++++..|.|+.+ =|.-+ ....+. ...++ +.+.--+..
T Consensus 102 l~~aGa~gv~iEd~~~~~~k~l~~~~e~~~~I~a~~~a~~~~g~~~~v~aRtd~~--~~g~~~~~~~~~~ai~ra~a~~e 179 (255)
T 2qiw_A 102 ILEAGAVGINVEDVVHSEGKRVREAQEHADYIAAARQAADVAGVDVVINGRTDAV--KLGADVFEDPMVEAIKRIKLMEQ 179 (255)
T ss_dssp HHHTTCCEEEECSEEGGGTTEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECHH--HHCTTTSSSHHHHHHHHHHHHHH
T ss_pred HHHcCCcEEEECCCCCCCCCcccCHHHHHHHHHHHHHHHHhcCCCeEEEEEechh--hccCCcchHHHHHHHHHHHHHHH
Confidence 8876 78887753320 011 12234555555555555556999433 23211 001111 12223 777777788
Q ss_pred hCCcEEeec
Q 010211 398 EGADAVMLS 406 (515)
Q Consensus 398 ~G~D~vmLs 406 (515)
.|+|++++-
T Consensus 180 AGAd~i~~e 188 (255)
T 2qiw_A 180 AGARSVYPV 188 (255)
T ss_dssp HTCSEEEEC
T ss_pred cCCcEEEEc
Confidence 899999993
No 426
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=27.44 E-value=1.4e+02 Score=27.48 Aligned_cols=95 Identities=11% Similarity=-0.022 Sum_probs=54.1
Q ss_pred HHHhhcchhcCCcEEEecccC-CHHHHHHHHHHHHhcC--CCceEEEEecChhhhhcHHHHHhh-cCeeEEcCCcccccC
Q 010211 270 WEDIKFGVDNQVDFYAVSFVK-DAKVVHELKDYLKSCN--ADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAEL 345 (515)
Q Consensus 270 ~~dI~~al~~gvD~ValSfVr-sa~dv~~vr~~l~~~~--~~i~IIaKIEt~~aveNldeIl~~-sDgImIgrgDLg~el 345 (515)
.+.++.+++.|+++|.+-.-. +.+++ .+.+.+.- ....++.- +..+--++. +|||-++..|+....
T Consensus 16 ~~~~~~a~~~Gv~~v~lr~k~~~~~~~---~~~i~~l~~~~~~~livn-------d~~~~A~~~gadgvhl~~~~~~~~~ 85 (210)
T 3ceu_A 16 DKIITALFEEGLDILHLRKPETPAMYS---ERLLTLIPEKYHRRIVTH-------EHFYLKEEFNLMGIHLNARNPSEPH 85 (210)
T ss_dssp HHHHHHHHHTTCCEEEECCSSCCHHHH---HHHHHHSCGGGGGGEEES-------SCTTHHHHTTCSEEECCSSSCSCCT
T ss_pred HHHHHHHHHCCCCEEEEccCCCCHHHH---HHHHHHHHHHhCCeEEEe-------CCHHHHHHcCCCEEEECcccccccc
Confidence 477888899999999876321 23333 23333321 23445542 333433444 899999888773321
Q ss_pred CCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeec
Q 010211 346 PIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (515)
Q Consensus 346 g~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs 406 (515)
..++.++..+ -+..| +..+. .|+|.+.++
T Consensus 86 -----------------~~~~~ig~s~-----------~t~~e---~~~A~-~GaDyv~~g 114 (210)
T 3ceu_A 86 -----------------DYAGHVSCSC-----------HSVEE---VKNRK-HFYDYVFMS 114 (210)
T ss_dssp -----------------TCCSEEEEEE-----------CSHHH---HHTTG-GGSSEEEEC
T ss_pred -----------------ccCCEEEEec-----------CCHHH---HHHHh-hCCCEEEEC
Confidence 1266676644 13333 33455 799999875
No 427
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=27.38 E-value=1.1e+02 Score=31.48 Aligned_cols=69 Identities=10% Similarity=0.063 Sum_probs=43.5
Q ss_pred HHhhcchhcCCcEEEec------ccCCHHHHHH-HHHHHHhcCCCceEEEEec---ChhhhhcHHHHHhh-cCeeEEcCC
Q 010211 271 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 339 (515)
Q Consensus 271 ~dI~~al~~gvD~ValS------fVrsa~dv~~-vr~~l~~~~~~i~IIaKIE---t~~aveNldeIl~~-sDgImIgrg 339 (515)
+.++|-++.|+|++.+. +.-+.++-.+ ++..++..+.++.||+-+= |.++++....-.+. +|++++-+-
T Consensus 84 ~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlvv~P 163 (360)
T 4dpp_A 84 DLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQGFAVGMHAALHINP 163 (360)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 44567788999998772 1112222222 3444555677899999773 56666666555555 899998754
No 428
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=27.34 E-value=80 Score=30.76 Aligned_cols=117 Identities=14% Similarity=0.154 Sum_probs=58.3
Q ss_pred hHHHhhcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecChhhhh-cHHHHHhhc---------CeeEEcC
Q 010211 269 DWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIP-NLHSIISAS---------DGAMVAR 338 (515)
Q Consensus 269 D~~dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~ave-NldeIl~~s---------DgImIgr 338 (515)
|...+++..+. +|++.++- ++.++..-++ .+.+ ...+|+.| .|.. +++|+..++ +.+++=|
T Consensus 96 d~~~~~~l~~~-vd~~kIga-~~~~n~~ll~-~~a~--~~kPV~lk----~G~~~t~~e~~~Av~~i~~~Gn~~i~L~~R 166 (262)
T 1zco_A 96 DTRHVELVAKY-SDILQIGA-RNSQNFELLK-EVGK--VENPVLLK----RGMGNTIQELLYSAEYIMAQGNENVILCER 166 (262)
T ss_dssp CGGGHHHHHHH-CSEEEECG-GGTTCHHHHH-HHTT--SSSCEEEE----CCTTCCHHHHHHHHHHHHTTTCCCEEEEEC
T ss_pred CHHhHHHHHhh-CCEEEECc-ccccCHHHHH-HHHh--cCCcEEEe----cCCCCCHHHHHHHHHHHHHCCCCeEEEEEC
Confidence 34445555566 78777762 3444432232 2333 24455554 3444 556655542 7788888
Q ss_pred Ccccc-cCCCCCHH-HHHHHHHHHHHhcCCcE-EEEeccccccccCCCcChHHHhH-HHHHHHhCCcEEee
Q 010211 339 GDLGA-ELPIEDVP-LLQEDIIRRCRSMQKPV-IVATNMLESMIDHPTPTRAEVSD-IAIAVREGADAVML 405 (515)
Q Consensus 339 gDLg~-elg~e~v~-~aqk~Ii~~c~~aGKPv-ivATqmLeSMi~~~~PtrAEv~D-vanaV~~G~D~vmL 405 (515)
|=-+. .++.+.+. .+... ..+..|.|| +.+++ .++. +.-+.. ...++..|+|++|+
T Consensus 167 G~~~~~~y~~~~v~L~ai~~---lk~~~~~pVi~d~sH------~~g~--~~~v~~~~~aAva~Ga~Gl~i 226 (262)
T 1zco_A 167 GIRTFETATRFTLDISAVPV---VKELSHLPIIVDPSH------PAGR--RSLVIPLAKAAYAIGADGIMV 226 (262)
T ss_dssp CBCCSCCSSSSBCCTTHHHH---HHHHBSSCEEECSST------TTCS--GGGHHHHHHHHHHTTCSEEEE
T ss_pred CCCCCCCcChhhcCHHHHHH---HHhhhCCCEEEEcCC------CCCc--cchHHHHHHHHHHcCCCEEEE
Confidence 83232 33444332 12222 223458998 54442 1111 111112 12378899999997
No 429
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=27.30 E-value=1.6e+02 Score=29.56 Aligned_cols=64 Identities=11% Similarity=0.088 Sum_probs=47.7
Q ss_pred HHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhhcCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEE
Q 010211 296 HELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (515)
Q Consensus 296 ~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivA 371 (515)
..+.+.+.+.|..+.+-+.-+.... +.+++++-.|.|+.+-. -...+..+-+.|+++++|++.+
T Consensus 93 ~~~~~~l~~lnp~v~v~~~~~~~~~--~~~~~~~~~dvVv~~~d----------~~~~r~~ln~~~~~~~ip~i~~ 156 (346)
T 1y8q_A 93 EASLERAQNLNPMVDVKVDTEDIEK--KPESFFTQFDAVCLTCC----------SRDVIVKVDQICHKNSIKFFTG 156 (346)
T ss_dssp HHHHHHHHHTCTTSEEEEECSCGGG--CCHHHHTTCSEEEEESC----------CHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHhHCCCeEEEEEecccCc--chHHHhcCCCEEEEcCC----------CHHHHHHHHHHHHHcCCCEEEE
Confidence 4567788888888888776665443 55778877888887622 2456778999999999999865
No 430
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=27.21 E-value=3.7e+02 Score=26.57 Aligned_cols=95 Identities=16% Similarity=0.179 Sum_probs=53.9
Q ss_pred HHHHhh-cCeeEEcCCccc--ccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHH-HhHHHHHHHhCC
Q 010211 325 HSIISA-SDGAMVARGDLG--AELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGA 400 (515)
Q Consensus 325 deIl~~-sDgImIgrgDLg--~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAE-v~DvanaV~~G~ 400 (515)
+-.++. +|||++. |=-| ..+..++-..+.+.+++.+ .-..||+..| +..+-+| +...-.+-..|+
T Consensus 39 ~~li~~Gv~gl~v~-GtTGE~~~Ls~~Er~~v~~~~~~~~-~grvpviaGv---------g~~~t~~ai~la~~a~~~Ga 107 (318)
T 3qfe_A 39 AYLARSGLTGLVIL-GTNAEAFLLTREERAQLIATARKAV-GPDFPIMAGV---------GAHSTRQVLEHINDASVAGA 107 (318)
T ss_dssp HHHHTTTCSEEEES-SGGGTGGGSCHHHHHHHHHHHHHHH-CTTSCEEEEC---------CCSSHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCCEEEeC-ccccChhhCCHHHHHHHHHHHHHHh-CCCCcEEEeC---------CCCCHHHHHHHHHHHHHcCC
Confidence 334444 8999986 2211 1222234444444444444 2346888743 4445555 555556667899
Q ss_pred cEEeecccccCCC--CHHHHHHHHHHHHHHHh
Q 010211 401 DAVMLSGETAHGK--FPLKAVKVMHTVALRTE 430 (515)
Q Consensus 401 D~vmLs~ETa~G~--yPveaV~~m~~I~~~aE 430 (515)
|++|+..=--..+ -+-+.++....|+..+.
T Consensus 108 davlv~~P~y~~kp~~~~~l~~~f~~ia~a~~ 139 (318)
T 3qfe_A 108 NYVLVLPPAYFGKATTPPVIKSFFDDVSCQSP 139 (318)
T ss_dssp SEEEECCCCC---CCCHHHHHHHHHHHHHHCS
T ss_pred CEEEEeCCcccCCCCCHHHHHHHHHHHHhhCC
Confidence 9999863211121 24577889999988775
No 431
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=27.17 E-value=1.4e+02 Score=29.08 Aligned_cols=91 Identities=18% Similarity=0.177 Sum_probs=47.8
Q ss_pred HHhh-cCeeEEcCCcc--cccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHH-HhHHHHHHHhCCcE
Q 010211 327 IISA-SDGAMVARGDL--GAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGADA 402 (515)
Q Consensus 327 Il~~-sDgImIgrgDL--g~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAE-v~DvanaV~~G~D~ 402 (515)
.++. +||+++. |=- +..+..++-..+.+.+++.++. ..||+..+ +..+-.| +...-.+-..|+|+
T Consensus 31 li~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~g-r~pvi~Gv---------g~~~t~~ai~la~~a~~~Gada 99 (291)
T 3a5f_A 31 HIKSKTDAIIVC-GTTGEATTMTETERKETIKFVIDKVNK-RIPVIAGT---------GSNNTAASIAMSKWAESIGVDG 99 (291)
T ss_dssp HHHTTCCEEEES-SGGGTGGGSCHHHHHHHHHHHHHHHTT-SSCEEEEC---------CCSSHHHHHHHHHHHHHTTCSE
T ss_pred HHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEeC---------CcccHHHHHHHHHHHHhcCCCE
Confidence 3344 7999885 211 1222334444555555555432 47888743 4444445 55555666779999
Q ss_pred EeecccccCCCCHHHHHHHHHHHHHH
Q 010211 403 VMLSGETAHGKFPLKAVKVMHTVALR 428 (515)
Q Consensus 403 vmLs~ETa~G~yPveaV~~m~~I~~~ 428 (515)
+|+..=--...-+-+.++....|+..
T Consensus 100 vlv~~P~y~~~s~~~l~~~f~~ia~a 125 (291)
T 3a5f_A 100 LLVITPYYNKTTQKGLVKHFKAVSDA 125 (291)
T ss_dssp EEEECCCSSCCCHHHHHHHC-CTGGG
T ss_pred EEEcCCCCCCCCHHHHHHHHHHHHHh
Confidence 99863221222234445555555443
No 432
>3ijd_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein structure initiative; HET: C2F; 2.00A {Clostridium thermocellum atcc 27405}
Probab=27.13 E-value=97 Score=31.26 Aligned_cols=99 Identities=10% Similarity=0.142 Sum_probs=65.6
Q ss_pred hhHHHhhcchhcCCcEEEecccCCHHHHHHHH----HHHHhcCC-CceEEEEec---ChhhhhcHH--------HHHhhc
Q 010211 268 KDWEDIKFGVDNQVDFYAVSFVKDAKVVHELK----DYLKSCNA-DIHVIVKIE---SADSIPNLH--------SIISAS 331 (515)
Q Consensus 268 kD~~dI~~al~~gvD~ValSfVrsa~dv~~vr----~~l~~~~~-~i~IIaKIE---t~~aveNld--------eIl~~s 331 (515)
.|.+.++.-++.|+||+.--++=+.+.+..+. +....+|- ++.||+=|= |...++-+. ++++..
T Consensus 166 ~d~~~Lk~KvdAGAdf~ITQ~ffD~e~~~~f~~~~~~~~r~~Gi~~vPIipGImPi~s~k~~~f~~~~G~~IP~~l~~~l 245 (315)
T 3ijd_A 166 DEHLRIIDKINKGCKYFITQAVYNVEAAKDFLSDYYYYSKNNNLKMVPIIFTLTPCGSTKTLEFMKWLGISIPRWLENDL 245 (315)
T ss_dssp CHHHHHHHHHHTTCCEEEESCCCCHHHHHHHHHHHHHHHHHTTBCCCCEEEEECCCCSHHHHHHHHHHTCCCCHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEccccCCHHHHHHHHHHHHHHHHHCCCCCCcEEEEeeecCCHHHHHHHhcCCCCCCHHHHHHH
Confidence 46778888889999999888888888887777 34456676 788988763 443333222 222211
Q ss_pred CeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEE
Q 010211 332 DGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (515)
Q Consensus 332 DgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivA 371 (515)
+. -.| ..+.|++-..+..+++++.|...|.|+|+-
T Consensus 246 ~~----~~d-~~~~Gi~~a~e~~~~L~~~~~g~~~p~G~n 280 (315)
T 3ijd_A 246 MN----CED-ILNKSVSLSKSIFNELMEFCLEKGIPIGCN 280 (315)
T ss_dssp HT----TCC-CHHHHHHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred Hh----CCC-HHHHHHHHHHHHHHHHHHhcCcCCcCCCcc
Confidence 11 123 234455555666788889999999999974
No 433
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=27.12 E-value=1.9e+02 Score=22.65 Aligned_cols=71 Identities=15% Similarity=0.175 Sum_probs=38.0
Q ss_pred CCcEEEecCCEEEEEeec-CCCCcceEEe-cccccccccCcCC-EEEEeCCeeEEEEEEEe---CCeEEEEEeeC-cEe
Q 010211 176 PQPIILKEGQEFNFTIKR-GVSTEDTVSV-NYDDFVNDVEVGD-ILLVDGGMMSLAVKSKT---KDLVKCIVVDG-GEL 247 (515)
Q Consensus 176 ~~~i~L~~G~~v~lt~~~-~~~~~~~i~v-~~~~l~~~v~~Gd-~IliDDG~I~l~V~~~~---~~~v~~~V~~g-G~L 247 (515)
+..+.+.+|+.++|...- +.......|. |-..+... .-+. .+.-+++.-.|.+..+. .+...|++.|. |..
T Consensus 12 p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~-~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~ 89 (100)
T 3knb_A 12 PSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQ-EQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGNEFGSD 89 (100)
T ss_dssp CSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTT-GGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEEETTEEE
T ss_pred CCcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeee-ccceeeeecccceEEEEEcCCCccCCEEEEEEEEECCCEE
Confidence 356889999999997652 1111222332 22222111 1111 23445666678776654 34578999885 443
No 434
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=27.11 E-value=3.5e+02 Score=27.02 Aligned_cols=57 Identities=12% Similarity=0.043 Sum_probs=35.3
Q ss_pred CCCCCHHHHHHHHHhCCcEEEEe-----cC-CCChH----HHHHHHHHHHHHHhhcCCceEEEEEecC
Q 010211 109 PSTSSREMIWKLAEEGMNVARLN-----MS-HGDHA----SHQKTIDLVKEYNSQFEDKAVAIMLDTK 166 (515)
Q Consensus 109 Pss~~~e~i~~li~aGm~v~RiN-----~S-Hg~~e----~~~~~i~~ir~~~~~~~~~~i~I~lDL~ 166 (515)
|...+.-.-+-+-++|.+..=+. ++ +|-++ .+.+++..+|.+..-.. ..++|+.|+.
T Consensus 30 ~~a~D~~sA~l~e~aGf~ai~vsG~~~a~s~~G~pD~~~vt~~em~~~~~~i~r~~~-~~~PviaD~d 96 (307)
T 3lye_A 30 PGVYDGLSARTAMELGFKSLYMTGAGTTASRLGQPDLAIAQLHDMRDNADMIANLDP-FGPPLIADMD 96 (307)
T ss_dssp EEECSHHHHHHHHHTTCSCEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHTSST-TSCCEEEECT
T ss_pred ecCcCHHHHHHHHHcCCCEEEeccHHHHHHhcCCCCCCCCCHHHHHHHHHhhhccCC-CCCcEEEECC
Confidence 44466667777778888887662 33 55543 35677777777654321 1356777764
No 435
>1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A*
Probab=26.96 E-value=1.1e+02 Score=31.22 Aligned_cols=50 Identities=12% Similarity=0.102 Sum_probs=32.4
Q ss_pred HHHHHHHHHhCCcEEEEecCCCC------------------hHHHHHHHHHHHHHHhhcCCceEEEEEecC
Q 010211 114 REMIWKLAEEGMNVARLNMSHGD------------------HASHQKTIDLVKEYNSQFEDKAVAIMLDTK 166 (515)
Q Consensus 114 ~e~i~~li~aGm~v~RiN~SHg~------------------~e~~~~~i~~ir~~~~~~~~~~i~I~lDL~ 166 (515)
.+.|+.|-+.|+|++|+-++.+. .+..-+.++.+=+..++.| +.+++||-
T Consensus 65 ~~dl~~~k~~G~N~vR~~~~d~~~~~~~~~~~~~~~~~g~~~e~~~~~lD~~l~~a~~~G---i~vil~l~ 132 (440)
T 1uuq_A 65 AKELDNLKAIGVNNLRVLAVSEKSEINSAVKPAVTNGFGNYDETLLQGLDYLLVELAKRD---MTVVLYFN 132 (440)
T ss_dssp HHHHHHHHHTTCCEEEEECCCBCCCSTTSCSSCSBSSTTCBCHHHHHHHHHHHHHHHHTT---CEEEEECC
T ss_pred HHHHHHHHHcCCCEEEECcccCCCCCcccccccccCCCCccCHHHHHHHHHHHHHHHHCC---CEEEEEcc
Confidence 45778899999999999854221 0233444555555556667 67777764
No 436
>2aam_A Hypothetical protein TM1410; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE UNL; 2.20A {Thermotoga maritima} SCOP: c.1.8.15
Probab=26.95 E-value=2.3e+02 Score=28.23 Aligned_cols=93 Identities=14% Similarity=0.149 Sum_probs=51.9
Q ss_pred hhcchhcCCcEEEecccCCHH---------------HHHH----HHHHHHhcCCCceEEEEecChhhhhcHH----HHHh
Q 010211 273 IKFGVDNQVDFYAVSFVKDAK---------------VVHE----LKDYLKSCNADIHVIVKIESADSIPNLH----SIIS 329 (515)
Q Consensus 273 I~~al~~gvD~ValSfVrsa~---------------dv~~----vr~~l~~~~~~i~IIaKIEt~~aveNld----eIl~ 329 (515)
++.+++.|+|+|.+=-+.+-+ +... +.++....+.+..|+.| .|.+-++ +++.
T Consensus 128 l~~~~~kG~DGvflDnvD~y~~~~~~~g~~~~~~~~~~~~~i~~La~~ar~~~P~~~ii~n----NG~~i~~~d~~~l~~ 203 (309)
T 2aam_A 128 LDRVIDQGFKGIYLDRIDSFEYWAQEGVISRRSAARKMINFVLEIAEYVRERKPDMLIIPQ----NGENILDFDDGQLAS 203 (309)
T ss_dssp HHHHHHTTCSEEEEECTTHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEB----SCGGGGGGCCSHHHH
T ss_pred HHHHHHcCCCeEeecccchhhhccccCCcchhhhHHHHHHHHHHHHHHHHhhCCCcEEEEe----cCHHhhcccHhHHHh
Confidence 456678999999886554322 2111 22223555656666654 3555566 7777
Q ss_pred hcCeeEEcCCcccccCCC---CCHHHHHHHHHHHHHhcCCcEEEE
Q 010211 330 ASDGAMVARGDLGAELPI---EDVPLLQEDIIRRCRSMQKPVIVA 371 (515)
Q Consensus 330 ~sDgImIgrgDLg~elg~---e~v~~aqk~Ii~~c~~aGKPvivA 371 (515)
..||+..- ++-..-.. ++-......-+..++++||||+..
T Consensus 204 ~id~v~~E--s~~~~~~~~~~~~e~~~~~~~l~~~~~~GkpV~~i 246 (309)
T 2aam_A 204 TVSGWAVE--NLFYLKTIPLEENETKSRLEYLIRLNRKGKFILSV 246 (309)
T ss_dssp HCSEEEEE--SSSEETTEECCHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred hcCEEEee--eEEecCCCCCCHHHHHHHHHHHHHHHHcCCcEEEE
Confidence 88988763 22111100 112222234456677889999984
No 437
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=26.89 E-value=1.2e+02 Score=24.23 Aligned_cols=41 Identities=20% Similarity=0.216 Sum_probs=24.1
Q ss_pred CCcEEEecCCEEEEEeecCCCCcceEEecccccccccCcCC
Q 010211 176 PQPIILKEGQEFNFTIKRGVSTEDTVSVNYDDFVNDVEVGD 216 (515)
Q Consensus 176 ~~~i~L~~G~~v~lt~~~~~~~~~~i~v~~~~l~~~v~~Gd 216 (515)
+..+.+++|++|+|...+.......+.++...+-..+.+|.
T Consensus 27 P~~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~~~~~~~pg~ 67 (100)
T 4hci_A 27 PNVITIPINESTTLLLKNKGKSEHTFTIKKLGIDVVVESGK 67 (100)
T ss_dssp SSEEEECTTSCEEEEEEECSSSCEEEEEGGGTEEEEECTTC
T ss_pred CCEEEECCCCEEEEEEEcCCCceEEEEEecCCcceeecCCc
Confidence 35699999999999754322223445554434434455554
No 438
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=26.71 E-value=85 Score=31.11 Aligned_cols=50 Identities=16% Similarity=0.153 Sum_probs=37.7
Q ss_pred EEEecCCCCCCHHHHHHHHHhCC-------------cEEEEecCCCChHHHHHHHHHHHHHHhh
Q 010211 103 IVCTIGPSTSSREMIWKLAEEGM-------------NVARLNMSHGDHASHQKTIDLVKEYNSQ 153 (515)
Q Consensus 103 Ii~TiGPss~~~e~i~~li~aGm-------------~v~RiN~SHg~~e~~~~~i~~ir~~~~~ 153 (515)
+...+. ..+..+..+.|.+.|+ +.+||+|++-+.++..+.++.++++.++
T Consensus 374 ~~~~~~-~~~~~~l~~~L~~~gi~v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~~~~ 436 (437)
T 3g0t_A 374 FTVGYK-GMDSSKLIEKFVRYGMCAITLKTTGSKRNEAMRICTSLLPESQFPDLEKRLQMLNAE 436 (437)
T ss_dssp EEEEET-TCCHHHHHHHHHHTTEECEESTTTTCCCTTCEEEECSSSCGGGHHHHHHHHHHHHHH
T ss_pred EEEecC-CCCHHHHHHHHHHcCeEEeeccccCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHhc
Confidence 334443 3345667788888875 6799999988999999999999887653
No 439
>3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei}
Probab=26.67 E-value=1.3e+02 Score=29.44 Aligned_cols=128 Identities=8% Similarity=0.117 Sum_probs=72.0
Q ss_pred EEeeCcEeccCceeeeCCCccCCCCCCHhhHHHhhcchh-----cCCcEEEecccCCHHHHHHHHHHHHhc---CCC---
Q 010211 240 IVVDGGELKSRRHLNVRGKSANLPSITDKDWEDIKFGVD-----NQVDFYAVSFVKDAKVVHELKDYLKSC---NAD--- 308 (515)
Q Consensus 240 ~V~~gG~L~s~KgVnlpg~~~~lp~ltekD~~dI~~al~-----~gvD~ValSfVrsa~dv~~vr~~l~~~---~~~--- 308 (515)
-..+.-.+.++-|+.- +.-+.+++.+.+.+-..++ ..+|.|-..|+.+++.+..+.+++++. +.+
T Consensus 35 ~~~~T~~~Snhtg~~~----~~g~~~~~~ql~~~~~~~~~~~~~~~~daV~tG~l~s~~~i~~v~~~l~~~k~~~~~~~~ 110 (300)
T 3zs7_A 35 DGINTVCLSNHSGYPV----IRGHRMSLQEYDELMEGVRANNFLSNYRYILTGYINNVDIIGRIRDTLKEVRELREKEDK 110 (300)
T ss_dssp EEEEEEEESSCTTSSC----CCEEECCHHHHHHHHHHHHHTTCGGGCSEEEECCCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEeeeEEecCCCCCCC----cCCCcCCHHHHHHHHHHHHhcCCcccCCEEEECCCCCHHHHHHHHHHHHHHHhhCcCcCC
Confidence 3344445555555321 2235567777766643332 257999999999999999888877653 211
Q ss_pred -ceEEE---------EecChhhhhcHHHHHhhcCeeEEcCCcccccCCC--CCHHHHHHHHHHHHHhcCCcEEEEe
Q 010211 309 -IHVIV---------KIESADSIPNLHSIISASDGAMVARGDLGAELPI--EDVPLLQEDIIRRCRSMQKPVIVAT 372 (515)
Q Consensus 309 -i~IIa---------KIEt~~aveNldeIl~~sDgImIgrgDLg~elg~--e~v~~aqk~Ii~~c~~aGKPvivAT 372 (515)
+.++. ..-..++++.+.+++..+|.|.-...++..=.|. .....+ ++..++-.+.|.+.++.|
T Consensus 111 ~~~vv~DPVm~d~G~~~~~~~~~~~~~~Ll~~adiitPN~~Ea~~L~g~~~~~~~~~-~~aa~~L~~~G~~~Vvvt 185 (300)
T 3zs7_A 111 KLTFICDPVMGDDGIMYCKKEVLDAYRELVPLADIVTPNYFEASLLSGVTVNDLSSA-ILAADWFHNCGVAHVIIK 185 (300)
T ss_dssp CCEEEECCCC---------CTHHHHHHHHGGGCSEECCCHHHHHHHHSSCCCSHHHH-HHHHHHHHHHTCSEEEEE
T ss_pred CceEEEccccccCCCeecCHHHHHHHHHHhhhCCEecCCHHHHHHHhCCCCCCHHHH-HHHHHHHHHhCCCEEEEe
Confidence 33332 2335677777888888899887665555443333 222222 233333344576655544
No 440
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=26.56 E-value=1.1e+02 Score=29.93 Aligned_cols=51 Identities=16% Similarity=0.360 Sum_probs=38.6
Q ss_pred HHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecccccCCCCHHHHHHHHHH
Q 010211 354 QEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHT 424 (515)
Q Consensus 354 qk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ETa~G~yPveaV~~m~~ 424 (515)
-+..++.|+++|++|.+-| .+ .| .+...++..|+|+++- +||-.+.+.+.+
T Consensus 257 ~~~~v~~~~~~Gl~V~~WT-------Vn-~~-----~~~~~l~~~GVDgIiT-------D~P~~~~~~l~~ 307 (313)
T 3l12_A 257 TPELVAEAHDLGLIVLTWT-------VN-EP-----EDIRRMATTGVDGIVT-------DYPGRTQRILID 307 (313)
T ss_dssp CHHHHHHHHHTTCEEEEBC-------CC-SH-----HHHHHHHHHTCSEEEE-------SCHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCEEEEEc-------CC-CH-----HHHHHHHHcCCCEEEe-------CCHHHHHHHHHh
Confidence 3688999999999999866 11 22 2455778889999985 799888777653
No 441
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=26.40 E-value=2.5e+02 Score=25.72 Aligned_cols=39 Identities=13% Similarity=0.324 Sum_probs=21.2
Q ss_pred cHHHHHhh-cCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEE
Q 010211 323 NLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (515)
Q Consensus 323 NldeIl~~-sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivA 371 (515)
.++.++.. +|||++.+.|- ......++.+.+.|+|+++.
T Consensus 53 ~~~~l~~~~vdgiIi~~~~~----------~~~~~~~~~~~~~~iPvV~~ 92 (291)
T 3l49_A 53 QIQTLIAQKPDAIIEQLGNL----------DVLNPWLQKINDAGIPLFTV 92 (291)
T ss_dssp HHHHHHHHCCSEEEEESSCH----------HHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHcCCCEEEEeCCCh----------hhhHHHHHHHHHCCCcEEEe
Confidence 34444433 67777764431 12334456666777777664
No 442
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=26.36 E-value=1e+02 Score=30.67 Aligned_cols=51 Identities=14% Similarity=0.231 Sum_probs=37.0
Q ss_pred EEEecCC-CCCCHHHHHHHHHhCC---------------------cEEEEecCCCChHHHHHHHHHHHHHHhhc
Q 010211 103 IVCTIGP-STSSREMIWKLAEEGM---------------------NVARLNMSHGDHASHQKTIDLVKEYNSQF 154 (515)
Q Consensus 103 Ii~TiGP-ss~~~e~i~~li~aGm---------------------~v~RiN~SHg~~e~~~~~i~~ir~~~~~~ 154 (515)
+.+.+.+ ..+..+..+.|.+.|+ +.+||+|++ +.++..+.++.++++.+++
T Consensus 368 ~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~~-~~e~i~~~l~~l~~~~~~~ 440 (444)
T 3if2_A 368 LWLWFKDLPISTLDLYERLKAKGTLIVPSEYFFPGVDVSDYQHAHECIRMSIAA-DEQTLIDGIKVIGEVVREL 440 (444)
T ss_dssp EEEEETTCSSCHHHHHHHHHHTTEECEEGGGSCTTCCCTTCSGGGSEEEEESSS-CHHHHHHHHHHHHHHHHHH
T ss_pred EEEEcCCCCCCHHHHHHHHHHCCeEEecchhhcCCCCCcccccCCCeEEEEEeC-CHHHHHHHHHHHHHHHHHH
Confidence 3445533 2345667777877775 468999999 9999999999998876543
No 443
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=26.32 E-value=1.2e+02 Score=30.03 Aligned_cols=58 Identities=24% Similarity=0.312 Sum_probs=42.0
Q ss_pred hhhcHHHHHhh--cCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCC-CcChHHHhHHHHHH
Q 010211 320 SIPNLHSIISA--SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHP-TPTRAEVSDIAIAV 396 (515)
Q Consensus 320 aveNldeIl~~--sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~-~PtrAEv~DvanaV 396 (515)
...+++++++. +|+|+|+ .| ......++.+|-++||+|++ ..| ..+.+|...+..+.
T Consensus 56 ~~~~~~~ll~~~~vD~V~i~-------tp----~~~H~~~~~~al~aGkhVl~---------EKPla~~~~e~~~l~~~a 115 (359)
T 3m2t_A 56 VLDNVPAMLNQVPLDAVVMA-------GP----PQLHFEMGLLAMSKGVNVFV---------EKPPCATLEELETLIDAA 115 (359)
T ss_dssp EESSHHHHHHHSCCSEEEEC-------SC----HHHHHHHHHHHHHTTCEEEE---------CSCSCSSHHHHHHHHHHH
T ss_pred ccCCHHHHhcCCCCCEEEEc-------CC----cHHHHHHHHHHHHCCCeEEE---------ECCCcCCHHHHHHHHHHH
Confidence 45788999885 6999997 22 34556778889999999998 555 56666766666555
Q ss_pred H
Q 010211 397 R 397 (515)
Q Consensus 397 ~ 397 (515)
.
T Consensus 116 ~ 116 (359)
T 3m2t_A 116 R 116 (359)
T ss_dssp H
T ss_pred H
Confidence 4
No 444
>2f23_A Anti-cleavage anti-GREA transcription factor GFH1; anti-GREA GFH1 thermus thermophilus; 1.60A {Thermus thermophilus} SCOP: a.2.1.1 d.26.1.2 PDB: 2eul_A 3aoh_X* 3aoi_X* 2etn_A
Probab=26.15 E-value=1.4e+02 Score=26.57 Aligned_cols=85 Identities=18% Similarity=0.279 Sum_probs=50.0
Q ss_pred HHHHHHHHHhhcCCceEEEEEecC-CCeeeeeccCCcEEEe---cCCEEEEEee---cCCCCcc--eEEecccc--cccc
Q 010211 143 TIDLVKEYNSQFEDKAVAIMLDTK-GPEVRSGDVPQPIILK---EGQEFNFTIK---RGVSTED--TVSVNYDD--FVND 211 (515)
Q Consensus 143 ~i~~ir~~~~~~~~~~i~I~lDL~-GPkIRtG~l~~~i~L~---~G~~v~lt~~---~~~~~~~--~i~v~~~~--l~~~ 211 (515)
+=..|+++++++. + +-.+|-. .-+++.|.. +.|+ .|+..+++.- ......+ .|++..|- -+-.
T Consensus 58 ~e~ri~~L~~~L~-~--a~vi~~~~~~~V~~Gs~---V~l~~~~~~~~~~~~iVg~~ead~~~~~~~IS~~SPlG~ALlG 131 (156)
T 2f23_A 58 IEARIDSLEDILS-R--AVILEEGSGEVIGLGSV---VELEDPLSGERLSVQVVSPAEANVLDTPMKISDASPMGKALLG 131 (156)
T ss_dssp HHHHHHHHHHHHH-H--EEECCTTCSCCCCTTCE---EEEECTTTCCEEEEEEECGGGCBTTSSSEEEETTSHHHHHHTT
T ss_pred HHHHHHHHHHHHH-h--CcccCCCCCCEEEeCcE---EEEEEcCCCCEEEEEEEChhHcCcCCCCEEECCCCHHHHHHcC
Confidence 3345666666664 2 4445543 224444433 5655 4766655432 2222345 67777662 2235
Q ss_pred cCcCCEEEEe--CCeeEEEEEEEe
Q 010211 212 VEVGDILLVD--GGMMSLAVKSKT 233 (515)
Q Consensus 212 v~~Gd~IliD--DG~I~l~V~~~~ 233 (515)
-++||.|-+. +|...++|+++.
T Consensus 132 k~~GD~v~~~~p~G~~~~~I~~I~ 155 (156)
T 2f23_A 132 HRVGDVLSLDTPKGKREFRVVAIH 155 (156)
T ss_dssp CCTTCEEEEEETTEEEEEEEEEEE
T ss_pred CCCCCEEEEEcCCCcEEEEEEEEE
Confidence 6899999987 788899988874
No 445
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=26.08 E-value=34 Score=32.74 Aligned_cols=36 Identities=14% Similarity=0.105 Sum_probs=26.1
Q ss_pred HHHHHHhCCcEEeecccccCCCCHHHHHHHHHHHHH
Q 010211 392 IAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVAL 427 (515)
Q Consensus 392 vanaV~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~ 427 (515)
...++..|+|.+....---..+-|.++++.+.+.+.
T Consensus 201 ~~~a~~aGad~iVvGr~I~~a~dp~~a~~~l~~~i~ 236 (246)
T 2yyu_A 201 PRKARALGSDYIVIGRSLTRAADPLRTYARLQHEWN 236 (246)
T ss_dssp HHHHHHHTCSEEEECHHHHTSSSHHHHHHHHHHHCC
T ss_pred HHHHHHcCCCEEEECHhhcCCCCHHHHHHHHHHHHH
Confidence 557788999998876444445569999988876543
No 446
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=26.06 E-value=95 Score=29.10 Aligned_cols=68 Identities=12% Similarity=0.149 Sum_probs=43.4
Q ss_pred hHHHhhcchhcCCcEEEeccc-CCHHHH--HHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh--cCeeEEc
Q 010211 269 DWEDIKFGVDNQVDFYAVSFV-KDAKVV--HELKDYLKSCNADIHVIVKIESADSIPNLHSIISA--SDGAMVA 337 (515)
Q Consensus 269 D~~dI~~al~~gvD~ValSfV-rsa~dv--~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~--sDgImIg 337 (515)
+.+|++.+.+.|+|++++-|. .|+..| ..++++.......+..+.=.-+. ..+.+.+|++. .|.|-+-
T Consensus 11 ~~eda~~a~~~GaD~iGfif~~~SpR~V~~~~a~~i~~~~~~~~~~VgVfvn~-~~~~i~~~~~~~~ld~vQLH 83 (205)
T 1nsj_A 11 NLEDALFSVESGADAVGFVFYPKSKRYISPEDARRISVELPPFVFRVGVFVNE-EPEKILDVASYVQLNAVQLH 83 (205)
T ss_dssp SHHHHHHHHHHTCSEEEEECCTTCTTBCCHHHHHHHHHHSCSSSEEEEEESSC-CHHHHHHHHHHHTCSEEEEC
T ss_pred cHHHHHHHHHcCCCEEEEEecCCCCCcCCHHHHHHHHHhCCCCCCEEEEEeCC-CHHHHHHHHHhhCCCEEEEC
Confidence 457888888999999998874 455554 45566655544444443333232 35666677665 6888875
No 447
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=25.81 E-value=84 Score=31.33 Aligned_cols=52 Identities=21% Similarity=0.298 Sum_probs=39.4
Q ss_pred HHHHHHHHhCCcEEEEec-CCCC-------hHHHHHHHHHHHHHHhhcCCceEEEEEecCCCee
Q 010211 115 EMIWKLAEEGMNVARLNM-SHGD-------HASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEV 170 (515)
Q Consensus 115 e~i~~li~aGm~v~RiN~-SHg~-------~e~~~~~i~~ir~~~~~~~~~~i~I~lDL~GPkI 170 (515)
+..++|+++|.++.=+|. |-.. .|++.+++..|+.+.++ + +.|.+|+.=|++
T Consensus 50 ~~a~~~v~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~~l~~~-~---vpiSIDT~~~~V 109 (294)
T 2y5s_A 50 RRAERMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPL-N---VPLSIDTYKPAV 109 (294)
T ss_dssp HHHHHHHHTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHGGG-C---SCEEEECCCHHH
T ss_pred HHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHhhC-C---CeEEEECCCHHH
Confidence 466789999999999998 4322 57888888888887654 3 567889876653
No 448
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=25.75 E-value=1.5e+02 Score=29.11 Aligned_cols=58 Identities=21% Similarity=0.378 Sum_probs=42.8
Q ss_pred hhhcHHHHHhh---cCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCC-CcChHHHhHHHHH
Q 010211 320 SIPNLHSIISA---SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHP-TPTRAEVSDIAIA 395 (515)
Q Consensus 320 aveNldeIl~~---sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~-~PtrAEv~Dvana 395 (515)
...+++++++. .|+|+|+ .| ...-..++.+|-++||+|++ ..| ..+.+|...+..+
T Consensus 68 ~~~~~~~ll~~~~~vD~V~i~-------tp----~~~H~~~~~~al~aGkhVl~---------EKP~a~~~~e~~~l~~~ 127 (330)
T 4ew6_A 68 SYTTIEAMLDAEPSIDAVSLC-------MP----PQYRYEAAYKALVAGKHVFL---------EKPPGATLSEVADLEAL 127 (330)
T ss_dssp EESSHHHHHHHCTTCCEEEEC-------SC----HHHHHHHHHHHHHTTCEEEE---------CSSSCSSHHHHHHHHHH
T ss_pred ccCCHHHHHhCCCCCCEEEEe-------CC----cHHHHHHHHHHHHcCCcEEE---------eCCCCCCHHHHHHHHHH
Confidence 45688999886 8999997 22 45567888889999999998 555 5666776666655
Q ss_pred HH
Q 010211 396 VR 397 (515)
Q Consensus 396 V~ 397 (515)
..
T Consensus 128 a~ 129 (330)
T 4ew6_A 128 AN 129 (330)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 449
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=25.74 E-value=1.4e+02 Score=30.31 Aligned_cols=55 Identities=13% Similarity=0.007 Sum_probs=36.2
Q ss_pred CceEEEEecChhhhhcHHHHHhh--cCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEE
Q 010211 308 DIHVIVKIESADSIPNLHSIISA--SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIV 370 (515)
Q Consensus 308 ~i~IIaKIEt~~aveNldeIl~~--sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPviv 370 (515)
.+.| +--|+....+.+.++++. +|.|.+-.+-.|- + .--.+|++.|+++|.++.+
T Consensus 269 ~iPI-a~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GG------i-t~~~~ia~~A~~~gi~~~~ 325 (410)
T 2gl5_A 269 TIPI-ATGERSYTRWGYRELLEKQSIAVAQPDLCLCGG------I-TEGKKICDYANIYDTTVQV 325 (410)
T ss_dssp SSCE-EECTTCCTTHHHHHHHHTTCCSEECCCTTTTTH------H-HHHHHHHHHHHTTTCEECC
T ss_pred CCCE-EecCCcCCHHHHHHHHHcCCCCEEecCccccCC------H-HHHHHHHHHHHHcCCeEee
Confidence 3554 446776677777777765 7888875433321 2 2235688889999999876
No 450
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=25.62 E-value=82 Score=29.22 Aligned_cols=100 Identities=6% Similarity=-0.040 Sum_probs=51.6
Q ss_pred HHhhcchhcCCcEEEecccC-----CHHHHHHHHHHHHhcCCCceEEEE---e-----cChhhhhcHHHHHhh-----cC
Q 010211 271 EDIKFGVDNQVDFYAVSFVK-----DAKVVHELKDYLKSCNADIHVIVK---I-----ESADSIPNLHSIISA-----SD 332 (515)
Q Consensus 271 ~dI~~al~~gvD~ValSfVr-----sa~dv~~vr~~l~~~~~~i~IIaK---I-----Et~~aveNldeIl~~-----sD 332 (515)
+.++.+.+.|.|+|-+.... +..++.++++.+++.|-.+..+.- + +-.++++.+.+.++. ++
T Consensus 20 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~ 99 (281)
T 3u0h_A 20 LYLDLARETGYRYVDVPFHWLEAEAERHGDAAVEAMFQRRGLVLANLGLPLNLYDSEPVFLRELSLLPDRARLCARLGAR 99 (281)
T ss_dssp HHHHHHHHTTCSEECCCHHHHHHHHHHHCHHHHHHHHHTTTCEECCEECCSCTTSCHHHHHHHHHTHHHHHHHHHHTTCC
T ss_pred HHHHHHHHcCCCEEEecHHHHHHHhcccCHHHHHHHHHHcCCceEEecccccccCCCHHHHHHHHHHHHHHHHHHHcCCC
Confidence 56677788999999776532 245567788888776654332220 1 111234444444443 34
Q ss_pred eeEE--cCC-cccccCCCCCHHHHHHHHHHHHHhcCCcEEE
Q 010211 333 GAMV--ARG-DLGAELPIEDVPLLQEDIIRRCRSMQKPVIV 370 (515)
Q Consensus 333 gImI--grg-DLg~elg~e~v~~aqk~Ii~~c~~aGKPviv 370 (515)
.|.+ .|+ +...+-.++.+....+++.+.|.+.|..+.+
T Consensus 100 ~v~~~~~p~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~l 140 (281)
T 3u0h_A 100 SVTAFLWPSMDEEPVRYISQLARRIRQVAVELLPLGMRVGL 140 (281)
T ss_dssp EEEEECCSEESSCHHHHHHHHHHHHHHHHHHHGGGTCEEEE
T ss_pred EEEEeecCCCCCcchhhHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 4442 222 1000001123445556666667777776555
No 451
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=25.59 E-value=82 Score=33.70 Aligned_cols=68 Identities=19% Similarity=0.169 Sum_probs=40.1
Q ss_pred HHHhhcchhcCCcEEEecccC-C--------HHHHHHHHHHHHhc--CCCceEEEEecChhhhhcHHHHHhh----cCee
Q 010211 270 WEDIKFGVDNQVDFYAVSFVK-D--------AKVVHELKDYLKSC--NADIHVIVKIESADSIPNLHSIISA----SDGA 334 (515)
Q Consensus 270 ~~dI~~al~~gvD~ValSfVr-s--------a~dv~~vr~~l~~~--~~~i~IIaKIEt~~aveNldeIl~~----sDgI 334 (515)
.++.+.+.+.|+|+|.+|--. + .+-+.++++.+... ..++.||+- -||.+-.++++. +|++
T Consensus 354 ~e~A~~a~~aGad~I~vs~hgG~~~d~~~~~~~~l~~v~~~v~~~~~~~~ipVia~----GGI~~g~Dv~kaLalGAdaV 429 (511)
T 1kbi_A 354 TEDVIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPILEQRNLKDKLEVFVD----GGVRRGTDVLKALCLGAKGV 429 (511)
T ss_dssp HHHHHHHHHTTCSEEEECCTTTTSSTTCCCHHHHHHHHHHHHHTTTCBTTBEEEEE----SSCCSHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHcCCCEEEEcCCCCccCCCCCchHHHHHHHHHHHHhhccCCCcEEEEE----CCCCCHHHHHHHHHcCCCEE
Confidence 355667778999999996311 0 12233445555322 346888872 344444444443 8999
Q ss_pred EEcCCcc
Q 010211 335 MVARGDL 341 (515)
Q Consensus 335 mIgrgDL 341 (515)
+|||.=|
T Consensus 430 ~iGr~~l 436 (511)
T 1kbi_A 430 GLGRPFL 436 (511)
T ss_dssp EECHHHH
T ss_pred EECHHHH
Confidence 9998543
No 452
>2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3
Probab=25.53 E-value=78 Score=30.72 Aligned_cols=49 Identities=8% Similarity=0.101 Sum_probs=30.5
Q ss_pred HHHHHHHHHhCCcEEEEecCCC---Ch------------HHHHHHHHHHHHHHhhcCCceEEEEEec
Q 010211 114 REMIWKLAEEGMNVARLNMSHG---DH------------ASHQKTIDLVKEYNSQFEDKAVAIMLDT 165 (515)
Q Consensus 114 ~e~i~~li~aGm~v~RiN~SHg---~~------------e~~~~~i~~ir~~~~~~~~~~i~I~lDL 165 (515)
.+.++.|-++|+|++|+.+.+- .+ +...+.++.+=+..++.| +.+++||
T Consensus 48 ~~d~~~~k~~G~N~vR~~~~~~~~~~p~~~~~g~~~~~~~~~~~~ld~~~~~a~~~G---i~vil~l 111 (353)
T 2c0h_A 48 ESTLSDMQSHGGNSVRVWLHIEGESTPEFDNNGYVTGIDNTLISDMRAYLHAAQRHN---ILIFFTL 111 (353)
T ss_dssp HHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEEECCTTHHHHHHHHHHHHHHTT---CEEEEEE
T ss_pred HHHHHHHHHcCCCEEEEceecCCccCccccCCCccccCCHHHHHHHHHHHHHHHHcC---CEEEEEc
Confidence 4578889999999999974332 11 023334444444555666 6677776
No 453
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=25.08 E-value=1e+02 Score=28.91 Aligned_cols=68 Identities=4% Similarity=-0.037 Sum_probs=43.2
Q ss_pred hHHHhhcchhcCCcEEEeccc-CCHHHH--HHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh--cCeeEEc
Q 010211 269 DWEDIKFGVDNQVDFYAVSFV-KDAKVV--HELKDYLKSCNADIHVIVKIESADSIPNLHSIISA--SDGAMVA 337 (515)
Q Consensus 269 D~~dI~~al~~gvD~ValSfV-rsa~dv--~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~--sDgImIg 337 (515)
+.+|++.+.+.|+|++++-|. .|+..| ..++++.......+..+.=.-+. ..+.+.+|++. .|.|-+-
T Consensus 10 ~~eda~~a~~~GaD~iGfif~~~SpR~V~~~~a~~i~~~~~~~~~~VgVfvn~-~~~~i~~~~~~~~ld~vQLH 82 (203)
T 1v5x_A 10 RLEDALLAEALGAFALGFVLAPGSRRRIAPEAARAIGEALGPFVVRVGVFRDQ-PPEEVLRLMEEARLQVAQLH 82 (203)
T ss_dssp CHHHHHHHHHHTCSEEEEECCTTCTTBCCHHHHHHHHHHSCSSSEEEEEESSC-CHHHHHHHHHHTTCSEEEEC
T ss_pred cHHHHHHHHHcCCCEEEEEecCCCCCcCCHHHHHHHHHhCCCCCCEEEEEeCC-CHHHHHHHHHhhCCCEEEEC
Confidence 457888888999999988874 455554 45566655544444433333232 35566677665 6888874
No 454
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=24.99 E-value=5.4e+02 Score=26.10 Aligned_cols=56 Identities=23% Similarity=0.160 Sum_probs=30.9
Q ss_pred cCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhC-CcEEeec
Q 010211 331 SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREG-ADAVMLS 406 (515)
Q Consensus 331 sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G-~D~vmLs 406 (515)
+|.|-+.-+.... -+++. . +-+..+..+.|++... .. +.. +...++..| +|.|++.
T Consensus 280 vd~i~v~~~~~~~-~~~~~-----~-~~~ir~~~~iPvi~~G---------~i-t~~---~a~~~l~~g~aD~V~ig 336 (379)
T 3aty_A 280 LAYLHYLRGDMVN-QQIGD-----V-VAWVRGSYSGVKISNL---------RY-DFE---EADQQIREGKVDAVAFG 336 (379)
T ss_dssp CSEEEEECSCTTS-CCCCC-----H-HHHHHTTCCSCEEEES---------SC-CHH---HHHHHHHTTSCSEEEES
T ss_pred CCEEEEcCCCcCC-CCccH-----H-HHHHHHHCCCcEEEEC---------CC-CHH---HHHHHHHcCCCeEEEec
Confidence 6877776543211 11221 2 2223345578988743 22 332 334778887 9999985
No 455
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=24.97 E-value=2.1e+02 Score=27.33 Aligned_cols=146 Identities=12% Similarity=0.011 Sum_probs=79.9
Q ss_pred HHhhcchhcCCcEEEecc----cC------CHHHHHHHHHHHHhcCCCceEEE-Ee----------c-------------
Q 010211 271 EDIKFGVDNQVDFYAVSF----VK------DAKVVHELKDYLKSCNADIHVIV-KI----------E------------- 316 (515)
Q Consensus 271 ~dI~~al~~gvD~ValSf----Vr------sa~dv~~vr~~l~~~~~~i~IIa-KI----------E------------- 316 (515)
+.++.+.+.|.|+|-+.. +. +.+++.++++.+++.|-.+..+. -. .
T Consensus 19 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~g~~~~~p~~~~~~~~~~~~~l~~ 98 (340)
T 2zds_A 19 EVCRLARDFGYDGLELACWGDHFEVDKALADPSYVDSRHQLLDKYGLKCWAISNHLVGQAVCDAIIDERHEAILPARIWG 98 (340)
T ss_dssp HHHHHHHHHTCSEEEEESSTTTCCHHHHHHCTTHHHHHHHHHHHTTCEEEEEEEHHHHHHHHCSCCSHHHHHHSCHHHHT
T ss_pred HHHHHHHHcCCCEEEeccccccCCccccccCHHHHHHHHHHHHHcCCeEEEeeccccccccccccccccccccccccccc
Confidence 446777788999998764 21 23457788999988776544322 11 0
Q ss_pred --C-----hhhhhcHHHHHhh-----cCeeEEcCCccccc--CC------------CCCHHHHHHHHHHHHHhcCCcEEE
Q 010211 317 --S-----ADSIPNLHSIISA-----SDGAMVARGDLGAE--LP------------IEDVPLLQEDIIRRCRSMQKPVIV 370 (515)
Q Consensus 317 --t-----~~aveNldeIl~~-----sDgImIgrgDLg~e--lg------------~e~v~~aqk~Ii~~c~~aGKPviv 370 (515)
. .++++.+...++. ++.|.+-.|..... .+ ++.+....+++.+.|.+.|..+.+
T Consensus 99 ~~~~~~~r~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~l 178 (340)
T 2zds_A 99 DGDAEGVRQRAAAEIKDTARAAARLGVDTVIGFTGSAIWHLVAMFPPAPESMIERGYQDFADRWNPILDVFDAEGVRFAH 178 (340)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHTCSEEEECCCCSSGGGTTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCCcCcccccccCCCcccchHHHHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 1 1234555555554 57777766543210 11 123445667788888889987666
Q ss_pred EeccccccccCCCcChHHHhHHHHHHHhCCcEEeeccccc----CCCCHHHHHHHH
Q 010211 371 ATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETA----HGKFPLKAVKVM 422 (515)
Q Consensus 371 ATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ETa----~G~yPveaV~~m 422 (515)
|.+-.....+-.++.++...+. +.+.+=+.-+|. .|..|.++++.+
T Consensus 179 -----En~~~~~~~~~~~~~~ll~~v~-~~~~vg~~~D~~H~~~~g~d~~~~l~~~ 228 (340)
T 2zds_A 179 -----EVHPSEIAYDYWTTHRALEAVG-HRPAFGLNFDPSHFVWQDLDPVGFLWDF 228 (340)
T ss_dssp -----ECCTTSSCCSHHHHHHHHHHTT-TCTTEEEEECCHHHHHTTCCHHHHHHHT
T ss_pred -----EcCCCcccCCHHHHHHHHHhcC-CCCCeeEEEchhhHHHhCCCHHHHHHHH
Confidence 3332222345555555544442 022233333443 466677666544
No 456
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=24.88 E-value=1.9e+02 Score=32.08 Aligned_cols=92 Identities=16% Similarity=0.239 Sum_probs=0.0
Q ss_pred CHhhHHHhhcchhcCCcEEEecccCCH----------------HHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHh
Q 010211 266 TDKDWEDIKFGVDNQVDFYAVSFVKDA----------------KVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIIS 329 (515)
Q Consensus 266 tekD~~dI~~al~~gvD~ValSfVrsa----------------~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~ 329 (515)
++.-++-|+||.++|.++|.+ +. .|+.++.+|-++ +.+.|+.-.|+..=-+++++.++
T Consensus 308 ~~~~k~yIDfAa~~G~~yvlv----D~gW~~~~~~d~~~~~p~~di~~l~~Ya~~--kgV~i~lw~~~~~~~~~~~~~~~ 381 (641)
T 3a24_A 308 NPTYKAYIDFASANGIEYVIL----DEGWAVNLQADLMQVVKEIDLKELVDYAAS--KNVGIILWAGYHAFERDMENVCR 381 (641)
T ss_dssp HHHHHHHHHHHHHTTCCEEEE----CTTSBCTTSCCTTCBCTTCCHHHHHHHHHH--TTCEEEEEEEHHHHHTSHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEE----ecccccCCCCCccccCCcCCHHHHHHHHHh--cCCEEEEEeeCcchHHHHHHHHH
Q ss_pred h-----cCeeEEc---CCcccccCCCCCHHHHHHHHHHHHHhcCCcEEE
Q 010211 330 A-----SDGAMVA---RGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIV 370 (515)
Q Consensus 330 ~-----sDgImIg---rgDLg~elg~e~v~~aqk~Ii~~c~~aGKPviv 370 (515)
. +|||-++ |+| ........+++++|.+++..|..
T Consensus 382 ~~~~~Gv~gvK~Df~~~~~-------Q~~v~~y~~i~~~aA~~~l~V~f 423 (641)
T 3a24_A 382 HYAEMGVKGFKVDFMDRDD-------QEMTAFNYRAAEMCAKYKLILDL 423 (641)
T ss_dssp HHHHHTCCEEEEECCCCCS-------HHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHcCCCEEEECCCCCCc-------HHHHHHHHHHHHHHHHcCCEEEc
No 457
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=24.88 E-value=63 Score=31.09 Aligned_cols=49 Identities=18% Similarity=0.252 Sum_probs=30.6
Q ss_pred HHHHHHHHhCCcEEEEecCCCC---hHHHHHHHHHHHHHHhhcCCceEEEEEecCC
Q 010211 115 EMIWKLAEEGMNVARLNMSHGD---HASHQKTIDLVKEYNSQFEDKAVAIMLDTKG 167 (515)
Q Consensus 115 e~i~~li~aGm~v~RiN~SHg~---~e~~~~~i~~ir~~~~~~~~~~i~I~lDL~G 167 (515)
+.++.|-+.|+|+.|+-++.+. .... +.++.+=+...+.| +.+++|+-+
T Consensus 36 ~~~~~lk~~G~N~VRi~~~~~~~w~~~~~-~~ld~~v~~a~~~G---i~Vild~h~ 87 (302)
T 1bqc_A 36 QAFADIKSHGANTVRVVLSNGVRWSKNGP-SDVANVISLCKQNR---LICMLEVHD 87 (302)
T ss_dssp THHHHHHHTTCSEEEEEECCSSSSCCCCH-HHHHHHHHHHHHTT---CEEEEEEGG
T ss_pred HHHHHHHHcCCCEEEEEccCCcccCCCCH-HHHHHHHHHHHHCC---CEEEEEecc
Confidence 6788899999999999886441 1111 22333333344555 778888753
No 458
>2jpp_A Translational repressor; RNA recognition, protein/RNA, CSRA, RSMA, shine-dalgarno; NMR {Pseudomonas fluorescens}
Probab=24.86 E-value=99 Score=24.67 Aligned_cols=27 Identities=11% Similarity=0.273 Sum_probs=22.8
Q ss_pred cCcCCEEEEeCCeeEEEEEEEeCCeEEE
Q 010211 212 VEVGDILLVDGGMMSLAVKSKTKDLVKC 239 (515)
Q Consensus 212 v~~Gd~IliDDG~I~l~V~~~~~~~v~~ 239 (515)
-++|..|.|.| .|.++|.++.++.|+.
T Consensus 6 Rk~GEsI~IGd-~I~ItVl~v~g~~VrL 32 (70)
T 2jpp_A 6 RKVGESINIGD-DITITILGVSGQQVRI 32 (70)
T ss_dssp EETTCEEEETT-TEEEEEEEEETTEEEE
T ss_pred ccCCCeEEECC-CEEEEEEEEeCCEEEE
Confidence 47899999987 6999999999888755
No 459
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=24.84 E-value=5.2e+02 Score=25.65 Aligned_cols=134 Identities=16% Similarity=0.156 Sum_probs=73.1
Q ss_pred HhhcchhcCCcEEEecccCCHH---------------HHHHHHHHHHhcCCCceEEEEecC-----hhhhhcHHHHHhh-
Q 010211 272 DIKFGVDNQVDFYAVSFVKDAK---------------VVHELKDYLKSCNADIHVIVKIES-----ADSIPNLHSIISA- 330 (515)
Q Consensus 272 dI~~al~~gvD~ValSfVrsa~---------------dv~~vr~~l~~~~~~i~IIaKIEt-----~~aveNldeIl~~- 330 (515)
+++.+++.|+|.|.+.+--+.. .+.+..++.++.|.+ +..-+|. ..-.+.+-++++.
T Consensus 101 ~i~~a~~~g~~~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~--v~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (337)
T 3ble_A 101 TVDWIKDSGAKVLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLK--INVYLEDWSNGFRNSPDYVKSLVEHL 178 (337)
T ss_dssp HHHHHHHHTCCEEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCE--EEEEEETHHHHHHHCHHHHHHHHHHH
T ss_pred hHHHHHHCCCCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCE--EEEEEEECCCCCcCCHHHHHHHHHHH
Confidence 6777888999998886533321 222333445555654 4455665 2223333333332
Q ss_pred ----cCeeEEcCCcccccCCCCCHHHHHHHHHHHHH-hc-CCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEe
Q 010211 331 ----SDGAMVARGDLGAELPIEDVPLLQEDIIRRCR-SM-QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVM 404 (515)
Q Consensus 331 ----sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~-~a-GKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vm 404 (515)
+|.|.++ | ..|.- .|....++++..+ .. +.|+.+.+ ++ +.-.| +.-...|+..|+|.+=
T Consensus 179 ~~~Ga~~i~l~--D---T~G~~-~P~~v~~lv~~l~~~~p~~~i~~H~-------Hn-d~GlA-~AN~laAv~aGa~~vd 243 (337)
T 3ble_A 179 SKEHIERIFLP--D---TLGVL-SPEETFQGVDSLIQKYPDIHFEFHG-------HN-DYDLS-VANSLQAIRAGVKGLH 243 (337)
T ss_dssp HTSCCSEEEEE--C---TTCCC-CHHHHHHHHHHHHHHCTTSCEEEEC-------BC-TTSCH-HHHHHHHHHTTCSEEE
T ss_pred HHcCCCEEEEe--c---CCCCc-CHHHHHHHHHHHHHhcCCCeEEEEe-------cC-CcchH-HHHHHHHHHhCCCEEE
Confidence 5666663 3 23432 2333344444433 33 68888876 33 23333 3334567888998765
Q ss_pred ec----ccccCCCCHHHHHHHHH
Q 010211 405 LS----GETAHGKFPLKAVKVMH 423 (515)
Q Consensus 405 Ls----~ETa~G~yPveaV~~m~ 423 (515)
-| || ..|+=|.|.|-++-
T Consensus 244 ~tv~GlG~-~aGN~~~E~lv~~L 265 (337)
T 3ble_A 244 ASINGLGE-RAGNTPLEALVTTI 265 (337)
T ss_dssp EBGGGCSS-TTCBCBHHHHHHHH
T ss_pred Eecccccc-cccchhHHHHHHHH
Confidence 32 45 56888888776543
No 460
>4djd_C C/Fe-SP, corrinoid/iron-sulfur protein large subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_C* 4djf_C*
Probab=24.75 E-value=1.6e+02 Score=31.17 Aligned_cols=123 Identities=18% Similarity=0.105 Sum_probs=72.5
Q ss_pred hhHHHhhcchhcCCcE--EEecccCCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh--cCeeEEcCCcccc
Q 010211 268 KDWEDIKFGVDNQVDF--YAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA--SDGAMVARGDLGA 343 (515)
Q Consensus 268 kD~~dI~~al~~gvD~--ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~--sDgImIgrgDLg~ 343 (515)
+|.+-++.|++.+.+. ..-|. +.+.++++-....+. +..++++=...+.+..+-+++.. .+-|++.||==
T Consensus 163 ~dpevleaALea~a~~~plI~sa--t~dn~e~m~~lAa~y--~~pVi~~~~dl~~lkelv~~a~~~GI~~IvLDPG~~-- 236 (446)
T 4djd_C 163 DDPDVLKEALAGVADRKPLLYAA--TGANYEAMTALAKEN--NCPLAVYGNGLEELAELVDKIVALGHKQLVLDPGAR-- 236 (446)
T ss_dssp SCHHHHHHHHGGGGGGCCEEEEE--CTTTHHHHHHHHHHT--TCCEEEECSSHHHHHHHHHHHHHTTCCCEEEECCCC--
T ss_pred CCHHHHHHHHHhhcCcCCeeEec--chhhHHHHHHHHHHc--CCcEEEEeccHHHHHHHHHHHHHCCCCcEEECCCch--
Confidence 6778888887766552 22232 355666666666554 44556654433333334333333 45566666641
Q ss_pred cCCCCCHHHHHHHHHHH-----HHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeec
Q 010211 344 ELPIEDVPLLQEDIIRR-----CRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (515)
Q Consensus 344 elg~e~v~~aqk~Ii~~-----c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs 406 (515)
|+.+....+.+|=++ =+..|-|+++.| .. ...|-|.+-.+-++..|+|.+.+.
T Consensus 237 --g~~~t~~~~~~iRr~AL~~~d~~LgyPvi~~~-------sr-~d~~~E~t~A~~~i~kga~Iv~vh 294 (446)
T 4djd_C 237 --ETSRAIADFTQIRRLAIKKRFRSFGYPIIALT-------TA-ANPLDEVLQAVNYVTKYASLVVLR 294 (446)
T ss_dssp --SHHHHHHHHHHHHHHHHHSCCGGGCSCBEEEC-------CC-SSHHHHHHHHHHHHHTTCSEEEES
T ss_pred --hHHHHHHHHHHHHHHhhhccCcccCCCEEecc-------CC-ccHHHHHHHHHHHHHcCCeEEEEc
Confidence 333444444444222 245899999876 22 346778777789999999999996
No 461
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=24.49 E-value=95 Score=31.45 Aligned_cols=55 Identities=11% Similarity=0.007 Sum_probs=37.0
Q ss_pred CceEEEEecChhhhhcHHHHHhh--cCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEE
Q 010211 308 DIHVIVKIESADSIPNLHSIISA--SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIV 370 (515)
Q Consensus 308 ~i~IIaKIEt~~aveNldeIl~~--sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPviv 370 (515)
.+.| +-=|+....+.+.++++. +|.|.+-..-.| | +-. -.++++.|+++|.++.+
T Consensus 250 ~ipI-a~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~G---G---it~-~~~i~~~A~~~g~~~~~ 306 (392)
T 2poz_A 250 PLPI-AVGERVYTRFGFRKIFELQACGIIQPDIGTAG---G---LME-TKKICAMAEAYNMRVAP 306 (392)
T ss_dssp SSCE-EECTTCCHHHHHHHHHTTTCCSEECCCTTTSS---C---HHH-HHHHHHHHHTTTCEECC
T ss_pred CCCE-EecCCcCCHHHHHHHHHcCCCCEEecCccccC---C---HHH-HHHHHHHHHHcCCeEec
Confidence 3554 456777777778888865 898888543332 2 322 35688889999999876
No 462
>3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina}
Probab=24.38 E-value=53 Score=33.13 Aligned_cols=53 Identities=15% Similarity=0.155 Sum_probs=33.4
Q ss_pred CHHHHHHHHHhCCcEEEEecCCCC----------hHHHHHHHHHHHHHHhhcCCceEEEEEecCCC
Q 010211 113 SREMIWKLAEEGMNVARLNMSHGD----------HASHQKTIDLVKEYNSQFEDKAVAIMLDTKGP 168 (515)
Q Consensus 113 ~~e~i~~li~aGm~v~RiN~SHg~----------~e~~~~~i~~ir~~~~~~~~~~i~I~lDL~GP 168 (515)
+.+++..|.+.|+|++||-++... .+...+.++.+=+...+.| +.+++|+-.-
T Consensus 45 t~~m~~~i~~~G~N~vRipi~w~~~~~~~~~g~~~~~~l~~ld~vV~~a~~~G---i~vIlDlH~~ 107 (340)
T 3qr3_A 45 IGQMQHFVNEDGMTIFRLPVGWQYLVNNNLGGNLDSTSISKYDQLVQGCLSLG---AYCIVDIHNY 107 (340)
T ss_dssp HHHHHHHHHHHCCCEEEEEECHHHHTTTCTTCCCCHHHHHHHHHHHHHHHHTT---CEEEEEECST
T ss_pred HHHHHHHHHHCCCCEEEEEeeHHHhCCCCCCCccCHHHHHHHHHHHHHHHHCC---CEEEEEecCC
Confidence 467777788899999999987421 1223333443333444445 7888898653
No 463
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=24.38 E-value=1.8e+02 Score=29.77 Aligned_cols=62 Identities=15% Similarity=0.206 Sum_probs=39.7
Q ss_pred CeEEEEec-CCCCCCHHHH-----HHHHHhCCcEEEEecCCC------ChHHHHHHHHHHHHHHhhcCCceEEEEEec
Q 010211 100 KTKIVCTI-GPSTSSREMI-----WKLAEEGMNVARLNMSHG------DHASHQKTIDLVKEYNSQFEDKAVAIMLDT 165 (515)
Q Consensus 100 ~TKIi~Ti-GPss~~~e~i-----~~li~aGm~v~RiN~SHg------~~e~~~~~i~~ir~~~~~~~~~~i~I~lDL 165 (515)
+...-+|+ |.-..++|.+ +++++.|.+.+.+..... +.++-.+.++.||+ .+| ..+.|++|.
T Consensus 125 ~v~~y~s~~g~~~~~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~~~~~~~d~~~v~avR~---a~g-~~~~l~vDa 198 (393)
T 4dwd_A 125 RLPCYSSIGGNAARSVDEVVREVARRVEAEQPAAVKIRWDGDRTRCDVDIPGDIAKARAVRE---LLG-PDAVIGFDA 198 (393)
T ss_dssp EEEEEEEECCCSSSCHHHHHHHHHHHHHHHCCSEEEEECCCCTTCCSCCHHHHHHHHHHHHH---HHC-TTCCEEEEC
T ss_pred ceeeEEecCccCCCCHHHHHHHHHHHHHHcCCCEEEEccCCCCcccccCHHHHHHHHHHHHH---HhC-CCCeEEEEC
Confidence 56677887 4433455544 666788999999999654 55555555555554 445 445566774
No 464
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=24.18 E-value=1.1e+02 Score=31.10 Aligned_cols=62 Identities=19% Similarity=0.218 Sum_probs=41.0
Q ss_pred CeEEEEecCCCCC-CHH----HHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHhhcCCceEEEEEec
Q 010211 100 KTKIVCTIGPSTS-SRE----MIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDT 165 (515)
Q Consensus 100 ~TKIi~TiGPss~-~~e----~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~~~~~~~~~~i~I~lDL 165 (515)
+....+|+|-... +++ ..+++.++|.+.+.+...|++.+.-.+.++.||++ .| ..+.|++|.
T Consensus 148 ~vp~y~~~g~~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~a---vg-~d~~l~vDa 214 (393)
T 2og9_A 148 SVRCYNTSGGFLHTPIDQLMVNASASIERGIGGIKLKVGQPDGALDIARVTAVRKH---LG-DAVPLMVDA 214 (393)
T ss_dssp EEEEEBCTTCCTTSCHHHHHHHHHHHHHTTCCCEEEECCCSCHHHHHHHHHHHHHH---HC-TTSCEEEEC
T ss_pred ceEEEEECCCcCCCCHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHH---cC-CCCEEEEEC
Confidence 4455566543322 454 45667889999999999998877767777777765 34 334566664
No 465
>1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3
Probab=23.89 E-value=65 Score=33.73 Aligned_cols=53 Identities=17% Similarity=0.272 Sum_probs=34.3
Q ss_pred CHHHHHHHHHhCCcEEEEecCCCC--hHHHHHHHHHHHHHHhhcCCceEEEEEecCCC
Q 010211 113 SREMIWKLAEEGMNVARLNMSHGD--HASHQKTIDLVKEYNSQFEDKAVAIMLDTKGP 168 (515)
Q Consensus 113 ~~e~i~~li~aGm~v~RiN~SHg~--~e~~~~~i~~ir~~~~~~~~~~i~I~lDL~GP 168 (515)
..+.|+.|-+.|+|++|+-++.|. .+...+.++.+=+...+.| +.+++|+-+.
T Consensus 41 ~~~di~~ik~~G~N~VRipv~~g~~~~~~~l~~ld~vv~~a~~~G---l~VIlDlH~~ 95 (464)
T 1wky_A 41 ATTAIEGIANTGANTVRIVLSDGGQWTKDDIQTVRNLISLAEDNN---LVAVLEVHDA 95 (464)
T ss_dssp HHHHHHHHHTTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHHTT---CEEEEEECTT
T ss_pred hHHHHHHHHHCCCCEEEEEcCCCCccCHHHHHHHHHHHHHHHHCC---CEEEEEecCC
Confidence 356899999999999999887442 1122233344444445555 7788898653
No 466
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=23.85 E-value=4.9e+02 Score=25.01 Aligned_cols=47 Identities=13% Similarity=-0.026 Sum_probs=29.2
Q ss_pred HHHHHHHHhc-CCcEEEEeccccccccCCCcChHHHhHHHH-HHHhC-CcEEeecccc
Q 010211 355 EDIIRRCRSM-QKPVIVATNMLESMIDHPTPTRAEVSDIAI-AVREG-ADAVMLSGET 409 (515)
Q Consensus 355 k~Ii~~c~~a-GKPvivATqmLeSMi~~~~PtrAEv~Dvan-aV~~G-~D~vmLs~ET 409 (515)
.+++++.+++ ++|+++= ..+..+..+..+.+. +...| +|++.+++=|
T Consensus 149 ~~ii~~vr~~~~~Pv~vK--------~~~~~~~~~~~~~a~~~~~aG~~d~i~v~~~~ 198 (314)
T 2e6f_A 149 RTYLQQVSLAYGLPFGVK--------MPPYFDIAHFDTAAAVLNEFPLVKFVTCVNSV 198 (314)
T ss_dssp HHHHHHHHHHHCSCEEEE--------ECCCCCHHHHHHHHHHHHTCTTEEEEEECCCE
T ss_pred HHHHHHHHHhcCCCEEEE--------ECCCCCHHHHHHHHHHHHhcCCceEEEEeCCC
Confidence 4555555544 8999873 233345556656554 45678 9999887633
No 467
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=23.82 E-value=3.4e+02 Score=26.29 Aligned_cols=92 Identities=22% Similarity=0.210 Sum_probs=49.9
Q ss_pred HHHHhh-cCeeEEcCCc--ccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHH-HhHHHHHHHhCC
Q 010211 325 HSIISA-SDGAMVARGD--LGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGA 400 (515)
Q Consensus 325 deIl~~-sDgImIgrgD--Lg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAE-v~DvanaV~~G~ 400 (515)
+-.++. +||+++. |= =+..+..+ -.+++++.+.++...|+.. .+..+-.| +...-.+-..|+
T Consensus 26 ~~li~~Gv~gl~v~-GttGE~~~Ls~~----Er~~v~~~~~~~~~gvi~G---------vg~~~t~~ai~la~~A~~~Ga 91 (286)
T 2r91_A 26 KNITSKGVDVVFVA-GTTGLGPALSLQ----EKMELTDAATSAARRVIVQ---------VASLNADEAIALAKYAESRGA 91 (286)
T ss_dssp HHHHHTTCCEEEET-STTTTGGGSCHH----HHHHHHHHHHHHCSSEEEE---------CCCSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHCCCCEEEEC-ccccChhhCCHH----HHHHHHHHHHHHhCCEEEe---------eCCCCHHHHHHHHHHHHhcCC
Confidence 334444 8999985 11 11111212 2344555544332225553 34444445 555556667799
Q ss_pred cEEeecccccCC-CCHHHHHHHHHHHHHHHh
Q 010211 401 DAVMLSGETAHG-KFPLKAVKVMHTVALRTE 430 (515)
Q Consensus 401 D~vmLs~ETa~G-~yPveaV~~m~~I~~~aE 430 (515)
|++|+..=--.. .-+-+.++....|+..+.
T Consensus 92 davlv~~P~y~~~~s~~~l~~~f~~va~a~~ 122 (286)
T 2r91_A 92 EAVASLPPYYFPRLSERQIAKYFRDLCSAVS 122 (286)
T ss_dssp SEEEECCSCSSTTCCHHHHHHHHHHHHHHCS
T ss_pred CEEEEcCCcCCCCCCHHHHHHHHHHHHHhcC
Confidence 999986332222 335677888888887664
No 468
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=23.82 E-value=5.1e+02 Score=25.18 Aligned_cols=143 Identities=19% Similarity=0.271 Sum_probs=83.7
Q ss_pred CHhhH-HHhhcchhcC-CcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEe----cChhhhhcHHHHHhh-----cCee
Q 010211 266 TDKDW-EDIKFGVDNQ-VDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKI----ESADSIPNLHSIISA-----SDGA 334 (515)
Q Consensus 266 tekD~-~dI~~al~~g-vD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKI----Et~~aveNldeIl~~-----sDgI 334 (515)
++.++ +.++.+++.| +|+|=+=.-...+.+.++.+...+. +++||+-- .|+. .+.+.+++.. +|.+
T Consensus 117 ~~~~~~~ll~~~l~~g~~dyIDvEl~~~~~~~~~l~~~a~~~--~~kvI~S~Hdf~~tP~-~~el~~~~~~~~~~GaDIv 193 (276)
T 3o1n_A 117 TTGQYIDLNRAAVDSGLVDMIDLELFTGDDEVKATVGYAHQH--NVAVIMSNHDFHKTPA-AEEIVQRLRKMQELGADIP 193 (276)
T ss_dssp CHHHHHHHHHHHHHHTCCSEEEEEGGGCHHHHHHHHHHHHHT--TCEEEEEEEESSCCCC-HHHHHHHHHHHHHTTCSEE
T ss_pred CHHHHHHHHHHHHhcCCCCEEEEECcCCHHHHHHHHHHHHhC--CCEEEEEeecCCCCcC-HHHHHHHHHHHHHcCCCEE
Confidence 45554 5667888989 9999887644445555555544433 45666532 3553 3444444433 5766
Q ss_pred EEcCCcccccCC--CCCHHHHHHHHHHHHHh-cCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEE--eecccc
Q 010211 335 MVARGDLGAELP--IEDVPLLQEDIIRRCRS-MQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAV--MLSGET 409 (515)
Q Consensus 335 mIgrgDLg~elg--~e~v~~aqk~Ii~~c~~-aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~v--mLs~ET 409 (515)
=|+ -++ .+++..+.+-.-+.... .++|+|.. +|=..+..+| +.+.+. |+-.. .+...+
T Consensus 194 Kia------~~a~s~~Dvl~Ll~~~~~~~~~~~~~PlIa~-----~MG~~G~~SR-----i~~~~~-GS~vTf~~l~~~s 256 (276)
T 3o1n_A 194 KIA------VMPQTKADVLTLLTATVEMQERYADRPIITM-----SMSKTGVISR-----LAGEVF-GSAATFGAVKKAS 256 (276)
T ss_dssp EEE------ECCSSHHHHHHHHHHHHHHHHHTCCSCCEEE-----ECSGGGTHHH-----HCHHHH-TCCEEECBSSCCS
T ss_pred EEE------ecCCChHHHHHHHHHHHHHHhcCCCCCEEEE-----ECCCchhhHH-----HHHHHh-CCceEecCCCCCC
Confidence 665 222 24555555444333332 68898873 4555555554 456554 44444 356678
Q ss_pred cCCCCHHHHHHHHHHHHHH
Q 010211 410 AHGKFPLKAVKVMHTVALR 428 (515)
Q Consensus 410 a~G~yPveaV~~m~~I~~~ 428 (515)
|=|..+++-++.+-++..+
T Consensus 257 APGQl~~~~l~~~l~~l~~ 275 (276)
T 3o1n_A 257 APGAISVADLRTVLTILHQ 275 (276)
T ss_dssp STTCCBHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHhcc
Confidence 9999999888777666544
No 469
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=23.80 E-value=2.5e+02 Score=28.04 Aligned_cols=71 Identities=11% Similarity=0.030 Sum_probs=40.1
Q ss_pred CHhhHHH-hhcchhcCCcEEEeccc---C-------CHHH---HHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh-
Q 010211 266 TDKDWED-IKFGVDNQVDFYAVSFV---K-------DAKV---VHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA- 330 (515)
Q Consensus 266 tekD~~d-I~~al~~gvD~ValSfV---r-------sa~d---v~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~- 330 (515)
+..|... ++...+.|+|+|-++-- . ...+ +..+++.+ ++.||+ .......++.+++++.
T Consensus 237 ~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~-----~iPVi~-~Ggi~t~e~a~~~l~~G 310 (349)
T 3hgj_A 237 SLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRV-----GLRTGA-VGLITTPEQAETLLQAG 310 (349)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHH-----CCEEEE-CSSCCCHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHc-----CceEEE-ECCCCCHHHHHHHHHCC
Confidence 3444433 34445689999998731 0 1112 23334333 456655 2333334566777776
Q ss_pred -cCeeEEcCCccc
Q 010211 331 -SDGAMVARGDLG 342 (515)
Q Consensus 331 -sDgImIgrgDLg 342 (515)
+|+|++||+=|+
T Consensus 311 ~aD~V~iGR~~la 323 (349)
T 3hgj_A 311 SADLVLLGRVLLR 323 (349)
T ss_dssp SCSEEEESTHHHH
T ss_pred CceEEEecHHHHh
Confidence 899999998653
No 470
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=23.79 E-value=2.4e+02 Score=28.70 Aligned_cols=93 Identities=25% Similarity=0.296 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh-cCeeEEcC-CcccccCCCCCHHHHHHHHHHHHHhcCCcEE
Q 010211 292 AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVAR-GDLGAELPIEDVPLLQEDIIRRCRSMQKPVI 369 (515)
Q Consensus 292 a~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDgImIgr-gDLg~elg~e~v~~aqk~Ii~~c~~aGKPvi 369 (515)
.+.+..+++.. ++++++|. ....+......+. +|+|.|+- |--..+-+.+. ..+.+++. ...+.|+|
T Consensus 214 ~~~i~~i~~~~-----~~Pv~vkg--v~t~e~a~~a~~aGad~I~vs~~gg~~~d~~~~~-~~~l~~v~---~~~~~pVi 282 (380)
T 1p4c_A 214 WEALRWLRDLW-----PHKLLVKG--LLSAEDADRCIAEGADGVILSNHGGRQLDCAISP-MEVLAQSV---AKTGKPVL 282 (380)
T ss_dssp HHHHHHHHHHC-----CSEEEEEE--ECCHHHHHHHHHTTCSEEEECCGGGTSCTTCCCG-GGTHHHHH---HHHCSCEE
T ss_pred HHHHHHHHHhc-----CCCEEEEe--cCcHHHHHHHHHcCCCEEEEcCCCCCcCCCCcCH-HHHHHHHH---HHcCCeEE
Confidence 45555555433 46777772 1223333333334 89999841 11111122222 12223332 23456988
Q ss_pred EEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecc
Q 010211 370 VATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 407 (515)
Q Consensus 370 vATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ 407 (515)
. ..+.-+ -.|+..++..|+|++++..
T Consensus 283 a---------~GGI~~---~~dv~kal~~GAdaV~iGr 308 (380)
T 1p4c_A 283 I---------DSGFRR---GSDIVKALALGAEAVLLGR 308 (380)
T ss_dssp E---------CSSCCS---HHHHHHHHHTTCSCEEESH
T ss_pred E---------ECCCCC---HHHHHHHHHhCCcHhhehH
Confidence 7 333333 3478889999999999863
No 471
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=23.68 E-value=1.6e+02 Score=29.87 Aligned_cols=55 Identities=16% Similarity=0.047 Sum_probs=34.6
Q ss_pred CceEEEEecChhhhhcHHHHHhh--cCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEE
Q 010211 308 DIHVIVKIESADSIPNLHSIISA--SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIV 370 (515)
Q Consensus 308 ~i~IIaKIEt~~aveNldeIl~~--sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPviv 370 (515)
.+.|+ -=|+....+.+.++++. +|.|.+-+.-.| | +- --.++++.|+++|.++.+
T Consensus 260 ~iPIa-~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~G---G---it-e~~~i~~~A~~~g~~~~~ 316 (403)
T 2ox4_A 260 DIPLA-SGERIYSRWGFLPFLEDRSIDVIQPDLGTCG---G---FT-EFKKIADMAHIFEVTVQA 316 (403)
T ss_dssp CSCEE-ECTTCCHHHHHHHHHHTTCCSEECCCHHHHT---H---HH-HHHHHHHHHHHTTCEECC
T ss_pred CCCEE-ecCCcCCHHHHHHHHHcCCCCEEecCccccC---C---HH-HHHHHHHHHHHcCCEEee
Confidence 35543 45776667777777765 788877422221 1 11 235688889999998776
No 472
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=23.62 E-value=1e+02 Score=28.90 Aligned_cols=100 Identities=12% Similarity=0.148 Sum_probs=53.9
Q ss_pred HhhcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEec-------------ChhhhhcHHHHHhhcCeeEEcC
Q 010211 272 DIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIE-------------SADSIPNLHSIISASDGAMVAR 338 (515)
Q Consensus 272 dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIE-------------t~~aveNldeIl~~sDgImIgr 338 (515)
-++.+.+.|++.+.+. -.+.++...+.++.++.+..+...+-|= +.+.++.+.+.+.....-.+|=
T Consensus 25 ~l~~~~~~Gv~~~v~~-~~~~~~~~~~~~l~~~~~~~i~~~~GihP~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i 103 (272)
T 2y1h_A 25 VLEKAKKANVVALVAV-AEHSGEFEKIMQLSERYNGFVLPCLGVHPVQGLPPEDQRSVTLKDLDVALPIIENYKDRLLAI 103 (272)
T ss_dssp HHHHHHHTTEEEEEEC-CSSGGGHHHHHHHHHHTTTTEEEEECCCSBC-------CBCCHHHHHHHHHHHHHHGGGCSEE
T ss_pred HHHHHHHCCCCEEEEe-CCCHHHHHHHHHHHHHCCCCEEEEEEECCCccccccccccCCHHHHHHHHHHHHhCCCCEEEE
Confidence 3456667899876654 3456777777776655443333332221 1123333333333211122344
Q ss_pred CcccccCC--CC---CHHHHH----HHHHHHHHhcCCcEEEEe
Q 010211 339 GDLGAELP--IE---DVPLLQ----EDIIRRCRSMQKPVIVAT 372 (515)
Q Consensus 339 gDLg~elg--~e---~v~~aq----k~Ii~~c~~aGKPvivAT 372 (515)
|..|.+.+ +. .....| +..++.|++.|+||++-|
T Consensus 104 GE~Gld~~~~~~~~~~~~~~q~~~f~~~~~la~~~~lPv~iH~ 146 (272)
T 2y1h_A 104 GEVGLDFSPRFAGTGEQKEEQRQVLIRQIQLAKRLNLPVNVHS 146 (272)
T ss_dssp EEEECCCCTTTCCSHHHHHHHHHHHHHHHHHHHHHTCCEEEEC
T ss_pred EeccCCCccccCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEe
Confidence 66666652 11 123334 567788999999999955
No 473
>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A*
Probab=23.60 E-value=3.1e+02 Score=26.22 Aligned_cols=110 Identities=15% Similarity=0.106 Sum_probs=65.8
Q ss_pred CCCCCHhhHHHhhcch-h----cCCcEEEecccCCHHHHHHHHHHHHhc---CCCceEEEE----------ecChhhhhc
Q 010211 262 LPSITDKDWEDIKFGV-D----NQVDFYAVSFVKDAKVVHELKDYLKSC---NADIHVIVK----------IESADSIPN 323 (515)
Q Consensus 262 lp~ltekD~~dI~~al-~----~gvD~ValSfVrsa~dv~~vr~~l~~~---~~~i~IIaK----------IEt~~aveN 323 (515)
.|.+++.+.+.+...+ + ..+|.|...|+.+.+.+..+.++++.. +.++.++.= .=+.+.++.
T Consensus 54 g~~~~~~~~~~~~~~~~~~~~l~~~d~v~~G~l~~~~~~~~v~~~l~~~~~~~~~~~vv~DPVm~~~~~~~~~~~~~~~~ 133 (289)
T 3pzs_A 54 GCVMPASHLTDIVQGIADIDRLKDCDAVLSGYIGSPEQGSHILAAVAQVKQANPDAWYFCDPVMGHPEKGCIVAPGVAEF 133 (289)
T ss_dssp EEECCHHHHHHHHHHHHHTTCGGGCCEEEECCCSSHHHHHHHHHHHHHHHHHCTTCEEEECCCCEETTTEECSCHHHHHH
T ss_pred cccCCHHHHHHHHHHHHhcCCccCCCEEEECCCCCHHHHHHHHHHHHHHHhhCCCCeEEEcCccccCCCCcccCHHHHHH
Confidence 4556777776664332 1 378899999999999888888877543 444554432 123455666
Q ss_pred HHH-HHhhcCeeEEcCCcccccCCC--CCHHHHHHHHHHHHHhcCCcEEEEe
Q 010211 324 LHS-IISASDGAMVARGDLGAELPI--EDVPLLQEDIIRRCRSMQKPVIVAT 372 (515)
Q Consensus 324 lde-Il~~sDgImIgrgDLg~elg~--e~v~~aqk~Ii~~c~~aGKPvivAT 372 (515)
+.+ ++..+|.|..-..++..=.|. .... -.++..++..+.|...++.|
T Consensus 134 l~~~ll~~~diitpN~~E~~~L~g~~~~~~~-~~~~aa~~l~~~g~~~Vvvt 184 (289)
T 3pzs_A 134 FCNEALPASDMIAPNLLELEQLSGERVENVE-QAVQVARSLCARGPKVVLVK 184 (289)
T ss_dssp HHHTHHHHCSEECCCHHHHHHHHTSCCCSHH-HHHHHHHHHHTTSCSEEEEC
T ss_pred HHHHhhccCCEEeCCHHHHHHHhCCCCCCHH-HHHHHHHHHHHHCCCEEEEe
Confidence 664 777789887766665543343 2222 22333444445676666555
No 474
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=23.59 E-value=1.3e+02 Score=29.44 Aligned_cols=50 Identities=10% Similarity=0.169 Sum_probs=35.8
Q ss_pred EEEecCC-CCCCHHHHHHHHHhCC--------------------cEEEEecCCCChHHHHHHHHHHHHHHhh
Q 010211 103 IVCTIGP-STSSREMIWKLAEEGM--------------------NVARLNMSHGDHASHQKTIDLVKEYNSQ 153 (515)
Q Consensus 103 Ii~TiGP-ss~~~e~i~~li~aGm--------------------~v~RiN~SHg~~e~~~~~i~~ir~~~~~ 153 (515)
+.+.+.. ..+..+..+.|.+.|+ +.+||+|++ +.++..+.++.++++.++
T Consensus 342 ~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~~~~~~iRis~~~-~~~~i~~~~~~l~~~l~~ 412 (417)
T 3g7q_A 342 LWLWFKDLPITTELLYQRLKARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYVP-EPDKIEAGVKILAEEIER 412 (417)
T ss_dssp EEEECTTCSSCHHHHHHHHHHTTEECEEGGGGCTTBSSCCGGGGGEEEEESCS-CHHHHHHHHHHHHHHHHH
T ss_pred EEEEcCCCCCCHHHHHHHHHHCCEEEECchhhCCCCccccccCCCeEEEEecC-CHHHHHHHHHHHHHHHHH
Confidence 3344532 2345566777877775 367999998 999999999999887654
No 475
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=23.55 E-value=1.5e+02 Score=29.49 Aligned_cols=73 Identities=21% Similarity=0.171 Sum_probs=44.2
Q ss_pred cCeeEEcCCccc-ccCCCCC-----HHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEe
Q 010211 331 SDGAMVARGDLG-AELPIED-----VPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVM 404 (515)
Q Consensus 331 sDgImIgrgDLg-~elg~e~-----v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vm 404 (515)
.|.|++| .-|+ +.+|+++ +.++....-.-++....|.+++= |+.|-+...|.++ +.-+..++.-|++++-
T Consensus 38 ~d~ilvG-dSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD--~pfgsy~~s~~~a-~~na~rl~kaGa~aVk 113 (275)
T 1o66_A 38 VEMLLVG-DSLGMAVQGRKSTLPVSLRDMCYHTECVARGAKNAMIVSD--LPFGAYQQSKEQA-FAAAAELMAAGAHMVK 113 (275)
T ss_dssp CCEEEEC-TTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCSSSEEEEE--CCTTSSSSCHHHH-HHHHHHHHHTTCSEEE
T ss_pred CCEEEEC-HHHHHHHcCCCCCCCCCHHHHHHHHHHHHhhCCCCeEEEE--CCCCCccCCHHHH-HHHHHHHHHcCCcEEE
Confidence 7999884 2255 3467764 55555566566777777766642 3333332234332 3445677889999999
Q ss_pred ecc
Q 010211 405 LSG 407 (515)
Q Consensus 405 Ls~ 407 (515)
|=+
T Consensus 114 lEd 116 (275)
T 1o66_A 114 LEG 116 (275)
T ss_dssp EEC
T ss_pred ECC
Confidence 853
No 476
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=23.54 E-value=85 Score=31.28 Aligned_cols=65 Identities=9% Similarity=0.248 Sum_probs=41.4
Q ss_pred HhhcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEE----EecChhhhhcHHHHHhh-cCeeEEcCCcccc
Q 010211 272 DIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIV----KIESADSIPNLHSIISA-SDGAMVARGDLGA 343 (515)
Q Consensus 272 dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIa----KIEt~~aveNldeIl~~-sDgImIgrgDLg~ 343 (515)
..+.+.+.|+|+|-.+|. .+.+.++ .+. ..++|++ +....+.++++.+.++. ++|+.+||.=+-.
T Consensus 194 aariA~elGAD~VKt~~t--~e~~~~v---v~~--~~vPVv~~GG~~~~~~~~l~~v~~ai~aGA~Gv~vGRnI~q~ 263 (295)
T 3glc_A 194 ATRIAAEMGAQIIKTYYV--EKGFERI---VAG--CPVPIVIAGGKKLPEREALEMCWQAIDQGASGVDMGRNIFQS 263 (295)
T ss_dssp HHHHHHHTTCSEEEEECC--TTTHHHH---HHT--CSSCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEESHHHHTS
T ss_pred HHHHHHHhCCCEEEeCCC--HHHHHHH---HHh--CCCcEEEEECCCCCHHHHHHHHHHHHHhCCeEEEeHHHHhcC
Confidence 446678899999999985 3444333 322 2345443 22345667777777766 8899998865544
No 477
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=23.53 E-value=91 Score=31.82 Aligned_cols=86 Identities=15% Similarity=0.206 Sum_probs=55.2
Q ss_pred hhhhcHHHHHhh-------cCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCC-CcChHHHh
Q 010211 319 DSIPNLHSIISA-------SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHP-TPTRAEVS 390 (515)
Q Consensus 319 ~aveNldeIl~~-------sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~-~PtrAEv~ 390 (515)
....+++++++. +|+|+|+ .|.. .-..++.+|-++||+|++ ..| ..+.+|..
T Consensus 92 ~~~~~~~~ll~~~~~~~~~vD~V~I~-------tp~~----~H~~~~~~al~aGkhVl~---------EKPla~~~~ea~ 151 (417)
T 3v5n_A 92 RVYSDFKEMAIREAKLKNGIEAVAIV-------TPNH----VHYAAAKEFLKRGIHVIC---------DKPLTSTLADAK 151 (417)
T ss_dssp GBCSCHHHHHHHHHHCTTCCSEEEEC-------SCTT----SHHHHHHHHHTTTCEEEE---------ESSSCSSHHHHH
T ss_pred cccCCHHHHHhcccccCCCCcEEEEC-------CCcH----HHHHHHHHHHhCCCeEEE---------ECCCcCCHHHHH
Confidence 456789999986 8999997 2322 235677888999999998 555 56777777
Q ss_pred HHHHHHHhCCcEEeecccccCCCCHHHHHHHHHHHHHH
Q 010211 391 DIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALR 428 (515)
Q Consensus 391 DvanaV~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~ 428 (515)
.+..+... ....+.-+..-. -+ ..++.+++++.+
T Consensus 152 ~l~~~a~~-~g~~~~v~~~~R-~~--p~~~~~k~~i~~ 185 (417)
T 3v5n_A 152 KLKKAADE-SDALFVLTHNYT-GY--PMVRQAREMIEN 185 (417)
T ss_dssp HHHHHHHH-CSSCEEEECGGG-GS--HHHHHHHHHHHT
T ss_pred HHHHHHHH-cCCEEEEEeccc-CC--HHHHHHHHHHhc
Confidence 77665543 233333222221 12 367777777754
No 478
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=23.48 E-value=3.8e+02 Score=26.06 Aligned_cols=137 Identities=12% Similarity=0.082 Sum_probs=77.4
Q ss_pred hHHHhhcchhcCCcEEEecccCCH---------------HHHHHHHHHHHhcCCCceEEEEecC--------hhhhhcHH
Q 010211 269 DWEDIKFGVDNQVDFYAVSFVKDA---------------KVVHELKDYLKSCNADIHVIVKIES--------ADSIPNLH 325 (515)
Q Consensus 269 D~~dI~~al~~gvD~ValSfVrsa---------------~dv~~vr~~l~~~~~~i~IIaKIEt--------~~aveNld 325 (515)
+.++|+.+++.|+|.|.+..--+. +.+.++.++.++.|.+ +-+-|.+ ..-.+.+.
T Consensus 85 ~~~~i~~a~~aG~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~--V~~~l~~~~~~e~~~~~~~~~~~ 162 (302)
T 2ftp_A 85 NLKGFEAALESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVR--VRGYISCVLGCPYDGDVDPRQVA 162 (302)
T ss_dssp SHHHHHHHHHTTCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCE--EEEEEECTTCBTTTBCCCHHHHH
T ss_pred CHHHHHHHHhCCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCe--EEEEEEEEeeCCcCCCCCHHHHH
Confidence 347888889999999887443322 1223344556665554 3222222 12223333
Q ss_pred HHHh----h-cCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccccccccCCCcChHHHhHHHHHHHh
Q 010211 326 SIIS----A-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSM--QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVRE 398 (515)
Q Consensus 326 eIl~----~-sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~a--GKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~ 398 (515)
++++ . +|.|-++ | ..|. -.|....++++..++. +.|+.+.+ ++..-. + +.....++..
T Consensus 163 ~~~~~~~~~G~d~i~l~--D---T~G~-~~P~~~~~lv~~l~~~~~~~~l~~H~-------Hn~~Gl-a-~An~laAv~a 227 (302)
T 2ftp_A 163 WVARELQQMGCYEVSLG--D---TIGV-GTAGATRRLIEAVASEVPRERLAGHF-------HDTYGQ-A-LANIYASLLE 227 (302)
T ss_dssp HHHHHHHHTTCSEEEEE--E---SSSC-CCHHHHHHHHHHHTTTSCGGGEEEEE-------BCTTSC-H-HHHHHHHHHT
T ss_pred HHHHHHHHcCCCEEEEe--C---CCCC-cCHHHHHHHHHHHHHhCCCCeEEEEe-------CCCccH-H-HHHHHHHHHh
Confidence 3333 3 6888887 4 2344 2455556666665543 47888876 443333 2 3456678899
Q ss_pred CCcEEeec----ccc-----cCCCCHHHHHHHH
Q 010211 399 GADAVMLS----GET-----AHGKFPLKAVKVM 422 (515)
Q Consensus 399 G~D~vmLs----~ET-----a~G~yPveaV~~m 422 (515)
|++.+=.+ ||- ..|+=|.|.+-++
T Consensus 228 Ga~~vd~tv~GlG~cp~a~gr~GN~~~E~lv~~ 260 (302)
T 2ftp_A 228 GIAVFDSSVAGLGGCPYAKGATGNVASEDVLYL 260 (302)
T ss_dssp TCCEEEEBGGGCCBCGGGTTCBCBCBHHHHHHH
T ss_pred CCCEEEecccccCCCCCCCCCCCChhHHHHHHH
Confidence 99876432 442 4688888776544
No 479
>3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A*
Probab=23.46 E-value=86 Score=32.93 Aligned_cols=51 Identities=14% Similarity=0.307 Sum_probs=33.3
Q ss_pred HHHHHHHHHhCCcEEEEecCCCC---------------h----HHHHHHHHHHHHHHhhcCCceEEEEEecCC
Q 010211 114 REMIWKLAEEGMNVARLNMSHGD---------------H----ASHQKTIDLVKEYNSQFEDKAVAIMLDTKG 167 (515)
Q Consensus 114 ~e~i~~li~aGm~v~RiN~SHg~---------------~----e~~~~~i~~ir~~~~~~~~~~i~I~lDL~G 167 (515)
.+.++.|.+.|+|++|+-++... + +...+.++.+=+...+.| +.+++|+-.
T Consensus 87 ~~~i~~ik~~G~N~VRipi~~~~l~~~~~p~~~~~~~np~~~~~~~l~~ld~vV~~a~~~G---i~VIldlH~ 156 (458)
T 3qho_A 87 EDMLLQIKSLGFNAIRLPFCTESVKPGTQPIGIDYSKNPDLRGLDSLQIMEKIIKKAGDLG---IFVLLDYHR 156 (458)
T ss_dssp HHHHHHHHHTTCCEEEEEEETGGGSTTCCCCCCCTTTCGGGTTCCHHHHHHHHHHHHHHTT---CEEEEEEEE
T ss_pred HHHHHHHHHcCCCEEEEeeeHHHhCCCCCccccccccCccccchHHHHHHHHHHHHHHHCC---CEEEEeccc
Confidence 57899999999999999876321 1 123444444444555555 777888743
No 480
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=23.41 E-value=2.3e+02 Score=27.96 Aligned_cols=95 Identities=15% Similarity=0.171 Sum_probs=50.2
Q ss_pred HHHHhh-cCeeEEcCCccc--ccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHh-CC
Q 010211 325 HSIISA-SDGAMVARGDLG--AELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVRE-GA 400 (515)
Q Consensus 325 deIl~~-sDgImIgrgDLg--~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~-G~ 400 (515)
+..++. +||+++. |=-| ..+..++-..+.+.+++.++ -..||+..+ +..+-.|.-+.+....+ |+
T Consensus 35 ~~li~~Gv~Gl~v~-GtTGE~~~Ls~~Er~~v~~~~~~~~~-grvpViaGv---------g~~~t~~ai~la~~A~~~Ga 103 (311)
T 3h5d_A 35 EHLLAHHTDGILLA-GTTAESPTLTHDEELELFAAVQKVVN-GRVPLIAGV---------GTNDTRDSIEFVKEVAEFGG 103 (311)
T ss_dssp HHHHHTTCCCEEES-STTTTGGGSCHHHHHHHHHHHHHHSC-SSSCEEEEC---------CCSSHHHHHHHHHHHHHSCC
T ss_pred HHHHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEeC---------CCcCHHHHHHHHHHHHhcCC
Confidence 444444 8999985 2111 11122233333333333321 236888743 45555565554444444 87
Q ss_pred -cEEeecccccCCCCHHHHHHHHHHHHHHHh
Q 010211 401 -DAVMLSGETAHGKFPLKAVKVMHTVALRTE 430 (515)
Q Consensus 401 -D~vmLs~ETa~G~yPveaV~~m~~I~~~aE 430 (515)
|++|+..=--...-+-+.++....|+..+.
T Consensus 104 ~davlv~~P~y~~~s~~~l~~~f~~va~a~~ 134 (311)
T 3h5d_A 104 FAAGLAIVPYYNKPSQEGMYQHFKAIADASD 134 (311)
T ss_dssp CSEEEEECCCSSCCCHHHHHHHHHHHHHSCS
T ss_pred CcEEEEcCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 999986322223335677888888877664
No 481
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=23.34 E-value=1.1e+02 Score=30.46 Aligned_cols=63 Identities=13% Similarity=0.119 Sum_probs=45.0
Q ss_pred HHhhcchhcCCcEEEecccCCHHHHHHHHHHHHhcCCCceEEEEecChhh--hhcHHHHHhh-cCeeEEcC
Q 010211 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADS--IPNLHSIISA-SDGAMVAR 338 (515)
Q Consensus 271 ~dI~~al~~gvD~ValSfVrsa~dv~~vr~~l~~~~~~i~IIaKIEt~~a--veNldeIl~~-sDgImIgr 338 (515)
+.++.+++.|+|+|.+.- -+.+++.++++.+.....+++|.+ --| .+|+.++++. +|+|-+|.
T Consensus 208 ee~~~A~~aGaD~I~ld~-~~~~~l~~~v~~l~~~~~~~~I~A----SGGIt~~ni~~~~~aGaD~i~vGs 273 (299)
T 2jbm_A 208 QEAVQAAEAGADLVLLDN-FKPEELHPTATVLKAQFPSVAVEA----SGGITLDNLPQFCGPHIDVISMGM 273 (299)
T ss_dssp HHHHHHHHTTCSEEEEES-CCHHHHHHHHHHHHHHCTTSEEEE----ESSCCTTTHHHHCCTTCCEEECTH
T ss_pred HHHHHHHHcCCCEEEECC-CCHHHHHHHHHHhhccCCCeeEEE----ECCCCHHHHHHHHHCCCCEEEECh
Confidence 446667788999999986 468888887777765444565544 223 4678888777 89998874
No 482
>4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A*
Probab=23.25 E-value=81 Score=31.45 Aligned_cols=54 Identities=19% Similarity=0.211 Sum_probs=35.7
Q ss_pred CCHHHHHHHHHhCCcEEEEecCCCCh-----HHHHHHHHHHHHHHhhcCCceEEEEEecCCC
Q 010211 112 SSREMIWKLAEEGMNVARLNMSHGDH-----ASHQKTIDLVKEYNSQFEDKAVAIMLDTKGP 168 (515)
Q Consensus 112 ~~~e~i~~li~aGm~v~RiN~SHg~~-----e~~~~~i~~ir~~~~~~~~~~i~I~lDL~GP 168 (515)
...+.++.|-+.|+|++|+-+..... +...+.++.+=+...+.| +.+++|+-+.
T Consensus 86 ~~~~di~~ik~~G~N~VRi~~~~~~~~~~~~~~~l~~ld~~v~~a~~~G---i~Vild~H~~ 144 (359)
T 4hty_A 86 FSKKHFEVIRSWGANVVRVPVHPRAWKERGVKGYLELLDQVVAWNNELG---IYTILDWHSI 144 (359)
T ss_dssp CSHHHHHHHHHTTCSEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTT---CEEEEEECCE
T ss_pred cCHHHHHHHHhcCCCEEEEeccHHHhhccCCHHHHHHHHHHHHHHHHCC---CEEEEEcCCC
Confidence 35778999999999999998654321 223334444444455666 7788887653
No 483
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=23.20 E-value=2.2e+02 Score=27.96 Aligned_cols=95 Identities=19% Similarity=0.216 Sum_probs=55.3
Q ss_pred HHHHhh-cCeeEEcCCccc--ccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHH-HhHHHHHHHhCC
Q 010211 325 HSIISA-SDGAMVARGDLG--AELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGA 400 (515)
Q Consensus 325 deIl~~-sDgImIgrgDLg--~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAE-v~DvanaV~~G~ 400 (515)
+-.++. +||+++. |=-| ..+..++-..+.+.+++.++ -..||+..+ +..+-+| +...-.+-..|+
T Consensus 32 ~~li~~Gv~gl~v~-GttGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaGv---------g~~~t~~ai~la~~a~~~Ga 100 (300)
T 3eb2_A 32 DDLIQAGVHGLTPL-GSTGEFAYLGTAQREAVVRATIEAAQ-RRVPVVAGV---------ASTSVADAVAQAKLYEKLGA 100 (300)
T ss_dssp HHHHHTTCSCBBTT-SGGGTGGGCCHHHHHHHHHHHHHHHT-TSSCBEEEE---------EESSHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCCEEEEC-ccccCccccCHHHHHHHHHHHHHHhC-CCCcEEEeC---------CCCCHHHHHHHHHHHHHcCC
Confidence 333444 8999875 2211 22222444444455555542 236887644 3333444 555566677899
Q ss_pred cEEeecccccCCCCHHHHHHHHHHHHHHHh
Q 010211 401 DAVMLSGETAHGKFPLKAVKVMHTVALRTE 430 (515)
Q Consensus 401 D~vmLs~ETa~G~yPveaV~~m~~I~~~aE 430 (515)
|++|+..=--...-+-+.++....|+..+.
T Consensus 101 davlv~~P~y~~~~~~~l~~~f~~va~a~~ 130 (300)
T 3eb2_A 101 DGILAILEAYFPLKDAQIESYFRAIADAVE 130 (300)
T ss_dssp SEEEEEECCSSCCCHHHHHHHHHHHHHHCS
T ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHHHCC
Confidence 999986333233446788889999988876
No 484
>2p4v_A Transcription elongation factor GREB; transcript cleavage, GRE-factors, RNA polymerase; 2.60A {Escherichia coli}
Probab=23.19 E-value=99 Score=27.86 Aligned_cols=85 Identities=21% Similarity=0.227 Sum_probs=50.2
Q ss_pred HHHHHHHHHhhcCCceEEEEEecC---CCeeeeeccCCcEEEe--cCCEEEEEee---cCCCCcceEEecccc--ccccc
Q 010211 143 TIDLVKEYNSQFEDKAVAIMLDTK---GPEVRSGDVPQPIILK--EGQEFNFTIK---RGVSTEDTVSVNYDD--FVNDV 212 (515)
Q Consensus 143 ~i~~ir~~~~~~~~~~i~I~lDL~---GPkIRtG~l~~~i~L~--~G~~v~lt~~---~~~~~~~~i~v~~~~--l~~~v 212 (515)
+=..|+++++.+. -+-.+|.. +-++..|.. +.|+ .|++.+++.- ......+.|++..|- -+-.-
T Consensus 58 ~e~rI~~L~~~L~---~A~vid~~~~~~~~V~~Gs~---V~l~~~~g~~~~y~iVg~~ead~~~~~IS~~SPlg~ALlGk 131 (158)
T 2p4v_A 58 IDRRVRYLTKCME---NLKIVDYSPQQEGKVFFGAW---VEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPMARALLKK 131 (158)
T ss_dssp HHHHHHHHHHHHH---HCEECCCCSSSCSSCSSSCE---EEEECTTCCCEEEEBCCSTTCCSSSCCBCTTSHHHHHSTTC
T ss_pred HHHHHHHHHHHHh---hCeecCCccCCCCEEeccEE---EEEEECCCCEEEEEEECHHHcCccCCeecCCCHHHHHhcCC
Confidence 3344666666553 23444543 345555544 6664 5666666542 112234567776651 22345
Q ss_pred CcCCEEEEe--CCeeEEEEEEEe
Q 010211 213 EVGDILLVD--GGMMSLAVKSKT 233 (515)
Q Consensus 213 ~~Gd~IliD--DG~I~l~V~~~~ 233 (515)
++||.|-+. +|...++|+++.
T Consensus 132 ~vGD~v~v~~P~G~~~~~I~~I~ 154 (158)
T 2p4v_A 132 EVGDLAVVNTPAGEASWYVNAIE 154 (158)
T ss_dssp CTTCEEEEECSSCEEEEEEEEEE
T ss_pred CCCCEEEEEcCCCcEEEEEEEEE
Confidence 899999997 899999999886
No 485
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=23.15 E-value=5.3e+02 Score=25.39 Aligned_cols=121 Identities=13% Similarity=0.104 Sum_probs=57.7
Q ss_pred hcchhcCCcEEEecccCCHHHHH--HHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh--cCeeEEcCCcc---cccCC
Q 010211 274 KFGVDNQVDFYAVSFVKDAKVVH--ELKDYLKSCNADIHVIVKIESADSIPNLHSIISA--SDGAMVARGDL---GAELP 346 (515)
Q Consensus 274 ~~al~~gvD~ValSfVrsa~dv~--~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~--sDgImIgrgDL---g~elg 346 (515)
+.+.+.|+-+..-++....++.. ..-+++.+...+..++++|..-...+.+.+.++. +|+|-|--+-. ....+
T Consensus 80 ~aa~~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pv~~~i~~~~~~~~~~~~~~~~gad~i~i~~~~~~~~~~~~~ 159 (349)
T 1p0k_A 80 RAASQAGIPLAVGSQMSALKDPSERLSYEIVRKENPNGLIFANLGSEATAAQAKEAVEMIGANALQIHLNVIQEIVMPEG 159 (349)
T ss_dssp HHHHHHTCCEECCCCTTTTTCHHHHHHHHHHHHHCSSSCEEEEEETTCCHHHHHHHHHHTTCSEEEEEECTTTTC-----
T ss_pred HHHHHcCCcEEeccchhcccCcccccceehhhhhCCCceeEEeecCCCCHHHHHHHHHhcCCCeEEecccchhhhcCCCC
Confidence 34456687653323322223332 1113345455678899999832223334444433 67765432211 00001
Q ss_pred CC---CHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecc
Q 010211 347 IE---DVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 407 (515)
Q Consensus 347 ~e---~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ 407 (515)
-+ .+....+++ .+..++|+++-. + .+.-+ ..+...+...|+|++.+++
T Consensus 160 ~~~~~~~~~~i~~v---r~~~~~Pv~vK~------~-~~~~~---~~~a~~a~~~Gad~I~v~~ 210 (349)
T 1p0k_A 160 DRSFSGALKRIEQI---CSRVSVPVIVKE------V-GFGMS---KASAGKLYEAGAAAVDIGG 210 (349)
T ss_dssp ---CTTHHHHHHHH---HHHCSSCEEEEE------E-SSCCC---HHHHHHHHHHTCSEEEEEC
T ss_pred CcchHHHHHHHHHH---HHHcCCCEEEEe------c-CCCCC---HHHHHHHHHcCCCEEEEcC
Confidence 11 122223332 334689999831 0 11122 2345577888999999974
No 486
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=23.13 E-value=2e+02 Score=25.73 Aligned_cols=49 Identities=8% Similarity=0.226 Sum_probs=36.9
Q ss_pred CHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHhhcCCceEEEEEe
Q 010211 113 SREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLD 164 (515)
Q Consensus 113 ~~e~i~~li~aGm~v~RiN~SHg~~e~~~~~i~~ir~~~~~~~~~~i~I~lD 164 (515)
-.+.++.+.++|++..=+.+...+.++..+.++.+++.....+ +.++++
T Consensus 28 ~~~~~~~~~~~G~~~i~l~~~~~~~~~~~~~~~~l~~~~~~~~---v~v~v~ 76 (215)
T 1xi3_A 28 EVESVREALEGGATAIQMRIKNAPTREMYEIGKTLRQLTREYD---ALFFVD 76 (215)
T ss_dssp HHHHHHHHHHTTCSEEEECCCSCCHHHHHHHHHHHHHHHHHTT---CEEEEE
T ss_pred HHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHcC---CeEEEc
Confidence 3578999999999998887777778777888888887666554 445553
No 487
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A
Probab=23.05 E-value=1.4e+02 Score=28.64 Aligned_cols=58 Identities=14% Similarity=0.181 Sum_probs=40.5
Q ss_pred EEecCCEEEEEeec--CCC---CcceEEecccccccc---cCcCCEEEEeCCeeEEEEEEEeCCeEEE
Q 010211 180 ILKEGQEFNFTIKR--GVS---TEDTVSVNYDDFVND---VEVGDILLVDGGMMSLAVKSKTKDLVKC 239 (515)
Q Consensus 180 ~L~~G~~v~lt~~~--~~~---~~~~i~v~~~~l~~~---v~~Gd~IliDDG~I~l~V~~~~~~~v~~ 239 (515)
-++.|++.+|+... .+| .+....++...|... +++|+.+.+++ . ...|++++++.|..
T Consensus 63 Gm~vGek~~v~Ippe~AYGe~~~~lv~~vp~~~f~~~~~~~~vG~~~~~~~-~-~g~V~~v~~~~V~v 128 (231)
T 3prb_A 63 EMDVGEEREVVLPPEKAFGKRDPSKIKLIPLSEFTKRGIKPIKGLTITIDG-I-PGKIVSINSGRVLV 128 (231)
T ss_dssp TCCTTCEEEEEECGGGTTCCCCGGGEEEEETHHHHTTTCCCCTTCEEEETT-E-EEEEEEEETTEEEE
T ss_pred CCCCCCEEEEEeCcHHhcCCCChHHEEecCHHHCCcccCCCCCCcEEEecC-C-CEEEEEEcCCEEEE
Confidence 47789999998752 333 344666776667652 67799999864 4 46888888887643
No 488
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=23.01 E-value=1.6e+02 Score=29.79 Aligned_cols=55 Identities=11% Similarity=-0.004 Sum_probs=36.3
Q ss_pred CceEEEEecChhhhhcHHHHHhh--cCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEE
Q 010211 308 DIHVIVKIESADSIPNLHSIISA--SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIV 370 (515)
Q Consensus 308 ~i~IIaKIEt~~aveNldeIl~~--sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPviv 370 (515)
.+.| +--|+....+.+.++++. +|.|.+-..-.|- +- --.+|++.|+++|.++.+
T Consensus 266 ~iPI-a~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GG------it-e~~~i~~~A~~~g~~~~~ 322 (407)
T 2o56_A 266 NIPL-AAGERIYWRWGYRPFLENGSLSVIQPDICTCGG------IT-EVKKICDMAHVYDKTVQI 322 (407)
T ss_dssp CSCE-EECTTCCHHHHHHHHHHTTCCSEECCCTTTTTH------HH-HHHHHHHHHHTTTCEECC
T ss_pred CCCE-EeCCCcCCHHHHHHHHHcCCCCEEecCccccCC------HH-HHHHHHHHHHHcCCeEee
Confidence 3554 446777777777777755 7888875443321 22 235688889999999776
No 489
>1bxb_A Xylose isomerase; xylose metabolism; 2.20A {Thermus thermophilus} SCOP: c.1.15.3 PDB: 1bxc_A
Probab=22.96 E-value=5.7e+02 Score=25.42 Aligned_cols=145 Identities=12% Similarity=0.019 Sum_probs=79.7
Q ss_pred HHhhcchhcCCcEEEec----ccC--C----HHHHHHHHHHHHhcCCCceEEE-E-----------ecC------hhhhh
Q 010211 271 EDIKFGVDNQVDFYAVS----FVK--D----AKVVHELKDYLKSCNADIHVIV-K-----------IES------ADSIP 322 (515)
Q Consensus 271 ~dI~~al~~gvD~ValS----fVr--s----a~dv~~vr~~l~~~~~~i~IIa-K-----------IEt------~~ave 322 (515)
+.++++.+.|+++|-+. +-. + .+++.++++.+++.|-.+.-+. - +-+ ..+++
T Consensus 37 e~l~~aa~~G~~~vEl~~~~~~p~~~~~~e~~~~~~~l~~~l~~~GL~i~~~~~~~~~~p~~~~g~l~~~d~~~r~~~i~ 116 (387)
T 1bxb_A 37 YVVHKLAELGAYGVNLHDEDLIPRGTPPQERDQIVRRFKKALDETGLKVPMVTANLFSDPAFKDGAFTSPDPWVRAYALR 116 (387)
T ss_dssp HHHHHHHHHTCSEEEEEHHHHSCTTCCTTHHHHHHHHHHHHHHHHTCBCCEEECCCSSSGGGGGCSTTCSSHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEecCcccCCCCCChhhhHHHHHHHHHHHHHhCCEEEEEecCCCCCccccCCCCCCCCHHHHHHHHH
Confidence 45677778899999886 432 2 4678889999998876654332 1 111 23445
Q ss_pred cHHHHHhh-----cCeeEEcCCcccccC--------CCCCHHHHHHHHHHHHHhc--CCcEEEEecccccccc-----CC
Q 010211 323 NLHSIISA-----SDGAMVARGDLGAEL--------PIEDVPLLQEDIIRRCRSM--QKPVIVATNMLESMID-----HP 382 (515)
Q Consensus 323 NldeIl~~-----sDgImIgrgDLg~el--------g~e~v~~aqk~Ii~~c~~a--GKPvivATqmLeSMi~-----~~ 382 (515)
.+...++. +..|.+..|--+... .++.+....+++.+.+.++ |..+.+ |.+-. ..
T Consensus 117 ~~~~~i~~A~~LGa~~vv~~~G~~g~~~~~~~~~~~~~~~~~e~L~~l~~~a~~~g~gv~l~l-----E~~~~~~~~~~~ 191 (387)
T 1bxb_A 117 KSLETMDLGAELGAEIYVVWPGREGAEVEATGKARKVWDWVREALNFMAAYAEDQGYGYRFAL-----EPKPNEPRGDIY 191 (387)
T ss_dssp HHHHHHHHHHHHTCCEEEECCTTCEESCGGGCGGGTHHHHHHHHHHHHHHHHHHHTCCCEEEE-----CCCSSSSSSEES
T ss_pred HHHHHHHHHHHhCCCEEEECCCCCCccCCccCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEE-----ecCCCCCCCCcc
Confidence 55554443 577777665221111 1135667778888888888 554443 55432 12
Q ss_pred CcChHHHhHHHHHHHhCCcE-Eeecccc----cCCCCHHHHHHHH
Q 010211 383 TPTRAEVSDIAIAVREGADA-VMLSGET----AHGKFPLKAVKVM 422 (515)
Q Consensus 383 ~PtrAEv~DvanaV~~G~D~-vmLs~ET----a~G~yPveaV~~m 422 (515)
.+|-.++.++.+.+ |.+. +-+.-+| ..|.-|.+.++.+
T Consensus 192 ~~t~~~~~~ll~~v--~~~~~vgl~lD~gH~~~~g~d~~~~l~~~ 234 (387)
T 1bxb_A 192 FATVGSMLAFIHTL--DRPERFGLNPEFAHETMAGLNFVHAVAQA 234 (387)
T ss_dssp SCSHHHHHHHHTTS--SSGGGEEECCBHHHHHHTTCCHHHHHHHH
T ss_pred CCCHHHHHHHHHHc--CCccceEEEEecCcccccCCCHHHHHHHh
Confidence 33444433333222 3333 4444455 2466666655544
No 490
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=22.95 E-value=5.7e+02 Score=25.63 Aligned_cols=136 Identities=11% Similarity=0.189 Sum_probs=74.7
Q ss_pred hhcchhcCCcEEEeccc-------------CCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh-cCeeEEcC
Q 010211 273 IKFGVDNQVDFYAVSFV-------------KDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVAR 338 (515)
Q Consensus 273 I~~al~~gvD~ValSfV-------------rsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~-sDgImIgr 338 (515)
.+.-++.|+|+|=+..- ...+++..+...++...+...+..-|.|..+-- +++=++. +| ||
T Consensus 55 A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~~vpISIDT~~~~V-a~aAl~aGa~--iI-- 129 (314)
T 3tr9_A 55 AEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRFPQLISVDTSRPRV-MREAVNTGAD--MI-- 129 (314)
T ss_dssp HHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHCCSEEEEECSCHHH-HHHHHHHTCC--EE--
T ss_pred HHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhCCCeEEEeCCCHHH-HHHHHHcCCC--EE--
Confidence 34446789999877642 223444444444432222223556777765432 2333333 33 33
Q ss_pred CcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChH----------H-----HhHHHHHHHhCCc--
Q 010211 339 GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRA----------E-----VSDIAIAVREGAD-- 401 (515)
Q Consensus 339 gDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrA----------E-----v~DvanaV~~G~D-- 401 (515)
.|.+.. .. .++...+.++|.|+++.. ..+.|... | ...+..+...|.+
T Consensus 130 NDVsg~----~~----~~m~~v~a~~g~~vVlMh-------~~G~P~tmq~~~~ydvv~ev~~~l~~~i~~a~~~GI~~~ 194 (314)
T 3tr9_A 130 NDQRAL----QL----DDALTTVSALKTPVCLMH-------FPSETRKPGSTTHFYFLQSVKKELQESIQRCKKAGISED 194 (314)
T ss_dssp EETTTT----CS----TTHHHHHHHHTCCEEEEC-------CCCTTCCTTSSCHHHHHHHHHHHHHHHHHHHHHTTCCGG
T ss_pred EECCCC----Cc----hHHHHHHHHhCCeEEEEC-------CCCCCcccccccccchHHHHHHHHHHHHHHHHHcCCCHh
Confidence 333322 21 256777888999998732 33444321 1 2234567778885
Q ss_pred EEeeccccc---CCCCHHHHHHHHHHHHHH
Q 010211 402 AVMLSGETA---HGKFPLKAVKVMHTVALR 428 (515)
Q Consensus 402 ~vmLs~ETa---~G~yPveaV~~m~~I~~~ 428 (515)
-++|---.. .||-+.+..+.|+++-.-
T Consensus 195 ~IilDPG~G~~~F~Kt~~~n~~lL~~l~~l 224 (314)
T 3tr9_A 195 RIIIDPGFGQGNYGKNVSENFYLLNKLPEF 224 (314)
T ss_dssp GEEEECCCCSGGGCCCHHHHHHHHHTTHHH
T ss_pred HEEEeCCCCchhhcCCHHHHHHHHHHHHHH
Confidence 566654444 778888888888776443
No 491
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=22.83 E-value=3.4e+02 Score=26.38 Aligned_cols=69 Identities=9% Similarity=0.074 Sum_probs=44.8
Q ss_pred hhcHHHHHhhcCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCC
Q 010211 321 IPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGA 400 (515)
Q Consensus 321 veNldeIl~~sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~ 400 (515)
.++++++++.+|.++-. - .+.+-...++.|.++|+|+++.| .. .+..+...+..+...
T Consensus 64 ~~dl~~ll~~~DVVIDf--------T---~p~a~~~~~~~al~~G~~vVigT-------TG--~s~~~~~~L~~aa~~-- 121 (272)
T 4f3y_A 64 TDDIERVCAEADYLIDF--------T---LPEGTLVHLDAALRHDVKLVIGT-------TG--FSEPQKAQLRAAGEK-- 121 (272)
T ss_dssp BCCHHHHHHHCSEEEEC--------S---CHHHHHHHHHHHHHHTCEEEECC-------CC--CCHHHHHHHHHHTTT--
T ss_pred cCCHHHHhcCCCEEEEc--------C---CHHHHHHHHHHHHHcCCCEEEEC-------CC--CCHHHHHHHHHHhcc--
Confidence 36888888878887754 1 35666788999999999999966 22 344445555555443
Q ss_pred cEEeecccccC
Q 010211 401 DAVMLSGETAH 411 (515)
Q Consensus 401 D~vmLs~ETa~ 411 (515)
-.++.+.-.++
T Consensus 122 ~~vv~a~N~s~ 132 (272)
T 4f3y_A 122 IALVFSANMSV 132 (272)
T ss_dssp SEEEECSCCCH
T ss_pred CCEEEECCCCH
Confidence 23566544333
No 492
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=22.78 E-value=1.9e+02 Score=29.54 Aligned_cols=87 Identities=13% Similarity=0.079 Sum_probs=47.0
Q ss_pred cCeeEEc-CCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccccccCCCcChHH-HhHHHHHHHhCCcEEeeccc
Q 010211 331 SDGAMVA-RGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGADAVMLSGE 408 (515)
Q Consensus 331 sDgImIg-rgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAE-v~DvanaV~~G~D~vmLs~E 408 (515)
+||+++. ---=+..+..++-..+.+.+++.+. -..||+..| +..+-.| +...-.+-..|+|++|+..=
T Consensus 94 v~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~-grvpViaGv---------g~~st~eai~la~~A~~~Gadavlvv~P 163 (360)
T 4dpp_A 94 AEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFG-GSIKVIGNT---------GSNSTREAIHATEQGFAVGMHAALHINP 163 (360)
T ss_dssp CCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-TTSEEEEEC---------CCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CCEEEecccccChhhCCHHHHHHHHHHHHHHhC-CCCeEEEec---------CCCCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 8999994 1111122222344444444444442 246888743 4444455 55556677789999998632
Q ss_pred ccCCCCHHHHHHHHHHHHH
Q 010211 409 TAHGKFPLKAVKVMHTVAL 427 (515)
Q Consensus 409 Ta~G~yPveaV~~m~~I~~ 427 (515)
--...-+-+.++....|+.
T Consensus 164 yY~k~sq~gl~~hf~~IA~ 182 (360)
T 4dpp_A 164 YYGKTSIEGLIAHFQSVLH 182 (360)
T ss_dssp CSSCCCHHHHHHHHHTTGG
T ss_pred CCCCCCHHHHHHHHHHHHH
Confidence 1111223456677777754
No 493
>1kzl_A Riboflavin synthase; biosynthesis of riboflavin, ligand binding, transferase; HET: CRM; 2.10A {Schizosaccharomyces pombe} SCOP: b.43.4.3 b.43.4.3
Probab=22.78 E-value=1.6e+02 Score=28.02 Aligned_cols=54 Identities=19% Similarity=0.329 Sum_probs=43.0
Q ss_pred EEecccccccccCcCCEEEEeCCeeEEEEEEEeCCeEEEEEe-------eCcEeccCceeeeC
Q 010211 201 VSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTKDLVKCIVV-------DGGELKSRRHLNVR 256 (515)
Q Consensus 201 i~v~~~~l~~~v~~Gd~IliDDG~I~l~V~~~~~~~v~~~V~-------~gG~L~s~KgVnlp 256 (515)
+.+..+.+.+.++.||-|-+|. +.|.|.+++++.+.+.+. +=|.++.+.-|||.
T Consensus 25 l~i~~~~~~~~l~~g~SIAvnG--vcLTV~~~~~~~F~vdvipETl~~T~Lg~l~~Gd~VNLE 85 (208)
T 1kzl_A 25 MKIEAPQILDDCHTGDSIAVNG--TCLTVTDFDRYHFTVGIAPESLRLTNLGQCKAGDPVNLE 85 (208)
T ss_dssp EEEECGGGCTTCCTTCEEEETT--EEEEEEEECSSEEEEEECHHHHHHSSGGGCCTTCEEEEE
T ss_pred EEEechHHhcccCCCCEEEECC--EEeeEEEEcCCEEEEEEeHHHHhhccccccCCCCEEEec
Confidence 4444455778999999999987 899999999998887774 45677778888885
No 494
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=22.77 E-value=4.7e+02 Score=25.21 Aligned_cols=127 Identities=13% Similarity=0.152 Sum_probs=68.1
Q ss_pred hhcchhcCCcEEEeccc-CCHHHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhh--cCeeEEcCCcccccCCCCC
Q 010211 273 IKFGVDNQVDFYAVSFV-KDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA--SDGAMVARGDLGAELPIED 349 (515)
Q Consensus 273 I~~al~~gvD~ValSfV-rsa~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~--sDgImIgrgDLg~elg~e~ 349 (515)
+..+...|+|.|.+-.. .+.+++.++-++..+.| +.+++-+-|. +.++..++. .|.|-|-.-||... +. +
T Consensus 116 i~ea~~~GAD~ilLi~a~l~~~~l~~l~~~a~~lG--l~~lvEv~~~---eE~~~A~~l~g~~iIGinnr~l~t~-~~-d 188 (251)
T 1i4n_A 116 VKLASSVGADAILIIARILTAEQIKEIYEAAEELG--MDSLVEVHSR---EDLEKVFSVIRPKIIGINTRDLDTF-EI-K 188 (251)
T ss_dssp HHHHHHTTCSEEEEEGGGSCHHHHHHHHHHHHTTT--CEEEEEECSH---HHHHHHHTTCCCSEEEEECBCTTTC-CB-C
T ss_pred HHHHHHcCCCEEEEecccCCHHHHHHHHHHHHHcC--CeEEEEeCCH---HHHHHHHhcCCCCEEEEeCcccccC-CC-C
Confidence 44466789999877533 24455666655555543 3344443333 223444444 57777777676432 21 1
Q ss_pred HHHHHHHHHHHHHhc--CCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecccccCCCCHHHHHHHHH
Q 010211 350 VPLLQEDIIRRCRSM--QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMH 423 (515)
Q Consensus 350 v~~aqk~Ii~~c~~a--GKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ETa~G~yPveaV~~m~ 423 (515)
+ ....+.+... +++++. .++.-|.. |+..+... +|+++...--.....|.++++.|.
T Consensus 189 ~----~~~~~l~~~ip~~~~vIa---------EsGI~t~e---dv~~~~~~-a~avLVG~aimr~~d~~~~~~~l~ 247 (251)
T 1i4n_A 189 K----NVLWELLPLVPDDTVVVA---------ESGIKDPR---ELKDLRGK-VNAVLVGTSIMKAENPRRFLEEMR 247 (251)
T ss_dssp T----THHHHHGGGSCTTSEEEE---------ESCCCCGG---GHHHHTTT-CSEEEECHHHHHCSSHHHHHHHHH
T ss_pred H----HHHHHHHHhCCCCCEEEE---------eCCCCCHH---HHHHHHHh-CCEEEEcHHHcCCcCHHHHHHHHH
Confidence 1 1111222222 455554 44555544 45577777 999987433234577888777664
No 495
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0
Probab=22.69 E-value=1.3e+02 Score=28.24 Aligned_cols=50 Identities=20% Similarity=0.373 Sum_probs=38.0
Q ss_pred HHHHHHHHhcCCcEEEEeccccccccCCCcChHHHhHHHHHHHhCCcEEeecccccCCCCHHHHHHHHHH
Q 010211 355 EDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHT 424 (515)
Q Consensus 355 k~Ii~~c~~aGKPvivATqmLeSMi~~~~PtrAEv~DvanaV~~G~D~vmLs~ETa~G~yPveaV~~m~~ 424 (515)
.+.++.++++|++|.+-| .+ .| .+...++..|+|+++- +||-.+.+.+.+
T Consensus 186 ~~~v~~~~~~G~~v~~WT-------Vn-~~-----~~~~~l~~~GVdgIiT-------D~P~~~~~~l~~ 235 (238)
T 3no3_A 186 PDWVKDCKVLGMTSNVWT-------VD-DP-----KLMEEMIDMGVDFITT-------DLPEETQKILHS 235 (238)
T ss_dssp TTHHHHHHHTTCEEEEEC-------CC-SH-----HHHHHHHHHTCSEEEE-------SCHHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEEC-------CC-CH-----HHHHHHHHcCCCEEEC-------CCHHHHHHHHHh
Confidence 578999999999999876 21 22 2455778889999885 689888877754
No 496
>3guw_A Uncharacterized protein AF_1765; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.20A {Archaeoglobus fulgidus dsm 4304}
Probab=22.68 E-value=76 Score=30.69 Aligned_cols=38 Identities=26% Similarity=0.407 Sum_probs=23.6
Q ss_pred EEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEe
Q 010211 335 MVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVAT 372 (515)
Q Consensus 335 mIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivAT 372 (515)
++|=|..|.+...+.=..+.++.++.|++.|+|+++-+
T Consensus 93 vvaIGEiGLD~~~~~Q~~~f~~ql~lA~e~~lPv~iH~ 130 (261)
T 3guw_A 93 WVAFGEIGLELVTDEEIEVLKSQLELAKRMDVPCIIHT 130 (261)
T ss_dssp CSCEEEEECSSCCHHHHHHHHHHHHHHHHHTCCEEEEC
T ss_pred eEEEEEecCCCChHHHHHHHHHHHHHHHHhCCeEEEEc
Confidence 34445555554422212244577888999999999943
No 497
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=22.64 E-value=74 Score=32.15 Aligned_cols=53 Identities=17% Similarity=0.335 Sum_probs=39.0
Q ss_pred HHHHHHHHhCCcEEEEecCCCC------------hHHHHHHHHHHHHHHhhcCCceEEEEEecCCCee
Q 010211 115 EMIWKLAEEGMNVARLNMSHGD------------HASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEV 170 (515)
Q Consensus 115 e~i~~li~aGm~v~RiN~SHg~------------~e~~~~~i~~ir~~~~~~~~~~i~I~lDL~GPkI 170 (515)
+..++|+++|.++.=+|.--.- .|++++++..|+.+.++.+ +.|.+|+.=|++
T Consensus 53 ~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~~---vpISIDT~~~~V 117 (314)
T 3tr9_A 53 RTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRFP---QLISVDTSRPRV 117 (314)
T ss_dssp HHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHCC---SEEEEECSCHHH
T ss_pred HHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhCC---CeEEEeCCCHHH
Confidence 4667799999999999973211 4677778887877776654 778999876653
No 498
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=22.63 E-value=4e+02 Score=26.38 Aligned_cols=83 Identities=16% Similarity=0.206 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHhcCCCceEEEEecChhhhhcHHHHHhhcCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEEEe
Q 010211 293 KVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVAT 372 (515)
Q Consensus 293 ~dv~~vr~~l~~~~~~i~IIaKIEt~~aveNldeIl~~sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPvivAT 372 (515)
+.++.++++.++. .+.+++-+-.++.++-+ .+.+|.+-||-+++ ...+ +++++.+.||||++.|
T Consensus 75 ~GL~~L~~~~~e~--Glp~~tev~d~~~v~~l---~~~vd~lkIgA~~~------~n~~-----LLr~~a~~gkPVilK~ 138 (288)
T 3tml_A 75 EGLRILSEVKRQL--GLPVLTDVHSIDEIEQV---ASVVDVLQTPAFLC------RQTD-----FIHACARSGKPVNIKK 138 (288)
T ss_dssp HHHHHHHHHHHHH--CCCEEEECCSGGGHHHH---HHHCSEEEECGGGT------TCHH-----HHHHHHTSSSCEEEEC
T ss_pred HHHHHHHHHHHhc--CCeEEEEeCCHHHHHHH---HHhCCEEEECcccc------cCHH-----HHHHHHccCCcEEEeC
Confidence 4455566666554 46788877777766554 44599999996654 2333 3445668999999954
Q ss_pred ccccccccCCC-cChHHHhHHHHHHHh-CC
Q 010211 373 NMLESMIDHPT-PTRAEVSDIAIAVRE-GA 400 (515)
Q Consensus 373 qmLeSMi~~~~-PtrAEv~DvanaV~~-G~ 400 (515)
+. -|..|+...+..+.. |.
T Consensus 139 ---------G~~~t~~e~~~ave~i~~~Gn 159 (288)
T 3tml_A 139 ---------GQFLAPHDMKNVIDKARDAAR 159 (288)
T ss_dssp ---------CTTCCTTHHHHHHHHHHHHHH
T ss_pred ---------CCCCCHHHHHHHHHHHHHcCC
Confidence 44 466677777776654 54
No 499
>3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii}
Probab=22.56 E-value=82 Score=30.93 Aligned_cols=45 Identities=16% Similarity=0.259 Sum_probs=35.4
Q ss_pred hhcHHHHHhhcCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEE
Q 010211 321 IPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIV 370 (515)
Q Consensus 321 veNldeIl~~sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPviv 370 (515)
.+-.+|+.+.+|++.|..|-|. ++....+...++.++++|+|+++
T Consensus 47 ~~E~~e~~~~a~al~iNiGtl~-----~~~~~~m~~A~~~A~~~~~PvVL 91 (265)
T 3hpd_A 47 EEELEEMIRLADAVVINIGTLD-----SGWRRSMVKATEIANELGKPIVL 91 (265)
T ss_dssp TTTHHHHHHHCSEEEEECTTCC-----HHHHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHCCeEEEECCCCC-----hHHHHHHHHHHHHHHHcCCCEEE
Confidence 3567888989999999866552 34556677788999999999987
No 500
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=22.47 E-value=1.4e+02 Score=30.17 Aligned_cols=55 Identities=13% Similarity=0.025 Sum_probs=38.4
Q ss_pred CceEEEEecChhhhhcHHHHHhh--cCeeEEcCCcccccCCCCCHHHHHHHHHHHHHhcCCcEEE
Q 010211 308 DIHVIVKIESADSIPNLHSIISA--SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIV 370 (515)
Q Consensus 308 ~i~IIaKIEt~~aveNldeIl~~--sDgImIgrgDLg~elg~e~v~~aqk~Ii~~c~~aGKPviv 370 (515)
.+.| +-=|+....+.+.++++. +|.|.+-.+-.|- ..--.+|...|+++|.++..
T Consensus 245 ~iPI-a~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GG-------it~~~~ia~~A~~~gi~~~~ 301 (374)
T 3sjn_A 245 SQKI-AGGESLTTRYEFQEFITKSNADIVQPDITRCGG-------ITEMKKIYDIAQMNGTQLIP 301 (374)
T ss_dssp SSEE-EECTTCCHHHHHHHHHHHHCCSEECCBTTTSSH-------HHHHHHHHHHHHHHTCEECC
T ss_pred CCCE-EeCCCcCCHHHHHHHHHcCCCCEEEeCccccCC-------HHHHHHHHHHHHHcCCEEEe
Confidence 3554 456777777788888865 8999886544321 22345788899999999876
Done!