Query 010212
Match_columns 515
No_of_seqs 482 out of 1499
Neff 11.1
Searched_HMMs 46136
Date Thu Mar 28 22:21:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010212.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010212hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR00887 2A0109 phosphate:H+ 100.0 2.6E-45 5.7E-50 365.1 45.8 482 11-501 4-501 (502)
2 KOG0252 Inorganic phosphate tr 100.0 1.9E-46 4.1E-51 338.2 26.4 472 18-505 36-514 (538)
3 TIGR01299 synapt_SV2 synaptic 100.0 6.4E-42 1.4E-46 344.5 45.2 448 12-495 156-740 (742)
4 KOG0569 Permease of the major 100.0 1.7E-41 3.7E-46 320.1 35.7 448 20-506 8-472 (485)
5 PRK10077 xylE D-xylose transpo 100.0 1.5E-40 3.2E-45 331.1 43.1 453 17-506 6-475 (479)
6 COG2271 UhpC Sugar phosphate p 100.0 5.4E-41 1.2E-45 301.9 25.0 405 14-486 20-431 (448)
7 PRK10642 proline/glycine betai 100.0 7.5E-38 1.6E-42 310.4 39.9 414 22-495 15-436 (490)
8 TIGR00879 SP MFS transporter, 100.0 5E-38 1.1E-42 313.8 37.9 436 19-496 24-478 (481)
9 TIGR02332 HpaX 4-hydroxyphenyl 100.0 3.9E-38 8.4E-43 305.4 35.5 400 19-478 4-410 (412)
10 PRK09556 uhpT sugar phosphate 100.0 3.9E-38 8.6E-43 311.0 30.5 413 10-488 16-448 (467)
11 PRK12307 putative sialic acid 100.0 1.9E-36 4E-41 296.9 38.6 379 18-472 13-391 (426)
12 PRK11551 putative 3-hydroxyphe 100.0 2.8E-36 6.1E-41 293.7 38.9 385 17-488 9-395 (406)
13 PRK11663 regulatory protein Uh 100.0 6.4E-37 1.4E-41 299.4 34.2 407 17-493 17-429 (434)
14 PRK10406 alpha-ketoglutarate t 100.0 3.1E-36 6.7E-41 294.6 38.0 400 17-488 16-423 (432)
15 COG2814 AraJ Arabinose efflux 100.0 3.6E-36 7.9E-41 275.4 35.8 379 17-490 7-387 (394)
16 TIGR00898 2A0119 cation transp 100.0 7.7E-37 1.7E-41 306.0 33.8 382 44-498 110-504 (505)
17 TIGR00891 2A0112 putative sial 100.0 7.7E-36 1.7E-40 291.1 38.3 394 16-473 5-400 (405)
18 PRK09952 shikimate transporter 100.0 3E-35 6.5E-40 287.6 40.6 406 19-491 18-435 (438)
19 KOG0254 Predicted transporter 100.0 2.2E-35 4.9E-40 293.7 37.2 437 20-506 42-501 (513)
20 PRK03545 putative arabinose tr 100.0 8.9E-35 1.9E-39 281.1 38.3 374 20-490 6-381 (390)
21 PRK03893 putative sialic acid 100.0 1.1E-34 2.4E-39 290.1 36.6 405 17-480 14-444 (496)
22 KOG0253 Synaptic vesicle trans 100.0 1.3E-33 2.8E-38 247.5 37.4 429 11-495 66-526 (528)
23 TIGR00903 2A0129 major facilit 100.0 1.7E-34 3.6E-39 273.9 34.6 357 36-489 4-365 (368)
24 PRK15075 citrate-proton sympor 100.0 3.8E-34 8.3E-39 280.0 38.3 369 21-468 13-398 (434)
25 PRK11273 glpT sn-glycerol-3-ph 100.0 4.6E-34 1E-38 280.8 36.8 414 18-498 24-444 (452)
26 PRK09705 cynX putative cyanate 100.0 8.6E-34 1.9E-38 273.6 37.0 377 21-495 8-388 (393)
27 TIGR00895 2A0115 benzoate tran 100.0 7.4E-34 1.6E-38 276.5 35.6 388 13-461 7-397 (398)
28 PRK03699 putative transporter; 100.0 7.9E-34 1.7E-38 274.5 34.4 377 20-490 4-381 (394)
29 PRK05122 major facilitator sup 100.0 2.3E-33 5E-38 272.5 36.0 376 23-493 15-393 (399)
30 TIGR00890 2A0111 Oxalate/Forma 100.0 2.9E-34 6.2E-39 277.3 28.2 368 26-482 7-375 (377)
31 PLN00028 nitrate transmembrane 100.0 3E-33 6.5E-38 275.8 35.9 397 15-489 28-433 (476)
32 TIGR00893 2A0114 d-galactonate 100.0 1.4E-33 3E-38 274.6 31.5 390 32-486 3-396 (399)
33 PF00083 Sugar_tr: Sugar (and 100.0 1.6E-40 3.5E-45 328.0 -17.8 432 28-502 5-450 (451)
34 PRK10489 enterobactin exporter 100.0 1.1E-32 2.4E-37 268.9 34.8 381 33-503 27-414 (417)
35 TIGR00894 2A0114euk Na(+)-depe 100.0 3.3E-33 7.1E-38 276.5 31.3 413 16-491 12-452 (465)
36 TIGR00892 2A0113 monocarboxyla 100.0 8.1E-34 1.8E-38 278.4 25.9 400 16-485 12-417 (455)
37 PRK14995 methyl viologen resis 100.0 1.5E-32 3.3E-37 272.6 34.6 380 20-463 3-412 (495)
38 PRK10213 nepI ribonucleoside t 100.0 1.3E-31 2.8E-36 258.2 38.4 369 19-484 16-386 (394)
39 TIGR00712 glpT glycerol-3-phos 100.0 2.5E-32 5.5E-37 267.6 32.1 410 20-492 24-437 (438)
40 COG2223 NarK Nitrate/nitrite t 100.0 1.1E-31 2.3E-36 242.7 33.3 393 16-490 7-402 (417)
41 PRK12382 putative transporter; 100.0 6E-32 1.3E-36 261.8 34.2 367 25-487 17-387 (392)
42 PRK10504 putative transporter; 100.0 1.9E-31 4.1E-36 264.7 37.8 383 24-468 11-419 (471)
43 PRK10091 MFS transport protein 100.0 8.9E-32 1.9E-36 259.1 34.0 367 24-487 4-374 (382)
44 PRK15034 nitrate/nitrite trans 100.0 1.1E-30 2.3E-35 248.7 38.2 392 19-490 30-455 (462)
45 PRK15402 multidrug efflux syst 100.0 8.3E-31 1.8E-35 254.9 37.1 378 18-481 8-387 (406)
46 PRK03633 putative MFS family t 100.0 9.5E-31 2.1E-35 252.0 36.8 362 25-486 8-369 (381)
47 TIGR00900 2A0121 H+ Antiporter 100.0 6.6E-31 1.4E-35 252.6 33.4 352 29-466 5-365 (365)
48 TIGR00883 2A0106 metabolite-pr 100.0 6.2E-31 1.3E-35 255.6 32.8 380 32-479 2-391 (394)
49 cd06174 MFS The Major Facilita 100.0 2.1E-30 4.5E-35 247.8 36.0 346 27-487 3-350 (352)
50 TIGR00711 efflux_EmrB drug res 100.0 3.5E-31 7.6E-36 264.4 31.3 377 23-464 2-410 (485)
51 TIGR00881 2A0104 phosphoglycer 100.0 3.1E-32 6.7E-37 263.3 23.0 373 30-470 2-378 (379)
52 TIGR00710 efflux_Bcr_CflA drug 100.0 4.1E-30 8.9E-35 248.9 36.3 355 26-467 8-364 (385)
53 PRK09874 drug efflux system pr 100.0 4E-30 8.6E-35 250.9 36.2 374 26-487 17-396 (408)
54 PRK11043 putative transporter; 100.0 8.1E-30 1.7E-34 247.7 37.7 350 32-471 15-364 (401)
55 TIGR00897 2A0118 polyol permea 100.0 6.8E-30 1.5E-34 247.6 36.3 362 43-489 33-401 (402)
56 TIGR00899 2A0120 sugar efflux 100.0 8.8E-30 1.9E-34 245.7 35.0 364 31-489 5-374 (375)
57 KOG2532 Permease of the major 100.0 1.4E-30 3.1E-35 249.7 29.1 368 61-489 66-447 (466)
58 PRK10133 L-fucose transporter; 100.0 2.4E-29 5.2E-34 244.9 35.7 392 18-481 21-425 (438)
59 PRK11010 ampG muropeptide tran 100.0 3.2E-29 7E-34 247.5 36.7 387 23-491 12-405 (491)
60 KOG1330 Sugar transporter/spin 100.0 3.3E-32 7.1E-37 247.7 13.7 375 17-464 27-412 (493)
61 PRK11195 lysophospholipid tran 100.0 2.1E-29 4.5E-34 242.8 33.8 368 28-486 8-377 (393)
62 KOG0255 Synaptic vesicle trans 100.0 3.3E-29 7.3E-34 251.2 35.8 380 64-504 114-508 (521)
63 PRK15403 multidrug efflux syst 100.0 6.8E-29 1.5E-33 240.7 36.8 378 19-483 11-391 (413)
64 PF07690 MFS_1: Major Facilita 100.0 2.4E-30 5.3E-35 247.4 25.8 346 29-455 2-352 (352)
65 PRK10473 multidrug efflux syst 100.0 1.1E-28 2.3E-33 239.0 37.2 354 28-478 8-363 (392)
66 KOG2533 Permease of the major 100.0 4E-30 8.7E-35 247.0 24.2 391 21-476 43-443 (495)
67 PRK11646 multidrug resistance 100.0 2.3E-28 4.9E-33 236.2 35.5 351 40-485 27-384 (400)
68 TIGR00885 fucP L-fucose:H+ sym 100.0 1.1E-27 2.4E-32 231.2 37.4 382 25-477 5-400 (410)
69 PRK11102 bicyclomycin/multidru 100.0 4.3E-28 9.3E-33 233.9 33.8 336 38-459 6-344 (377)
70 PRK15011 sugar efflux transpor 100.0 9.5E-28 2.1E-32 231.9 34.4 362 32-490 24-392 (393)
71 PRK10054 putative transporter; 100.0 2.2E-28 4.8E-33 235.8 29.2 362 31-483 15-378 (395)
72 PRK11652 emrD multidrug resist 100.0 3.1E-27 6.7E-32 229.0 35.7 352 22-464 7-360 (394)
73 TIGR00902 2A0127 phenyl propri 100.0 3.8E-27 8.3E-32 226.8 35.0 360 28-484 9-374 (382)
74 TIGR00886 2A0108 nitrite extru 100.0 4.9E-28 1.1E-32 232.6 28.8 357 26-450 4-365 (366)
75 TIGR00889 2A0110 nucleoside tr 100.0 2.3E-27 5E-32 230.0 33.6 381 31-494 10-408 (418)
76 PRK09528 lacY galactoside perm 100.0 3.2E-27 7E-32 230.6 30.3 377 31-486 18-400 (420)
77 TIGR00896 CynX cyanate transpo 100.0 5.5E-27 1.2E-31 223.9 30.2 332 40-466 17-350 (355)
78 PRK11902 ampG muropeptide tran 100.0 4E-26 8.6E-31 221.4 36.2 379 29-491 5-392 (402)
79 KOG2615 Permease of the major 100.0 6.4E-28 1.4E-32 213.5 19.1 364 64-481 64-432 (451)
80 PF05977 MFS_3: Transmembrane 100.0 5E-26 1.1E-30 222.5 34.0 376 28-486 15-391 (524)
81 PRK11128 putative 3-phenylprop 100.0 9.9E-26 2.2E-30 217.1 35.0 356 32-483 13-373 (382)
82 PRK10207 dipeptide/tripeptide 100.0 2.2E-25 4.8E-30 218.9 37.5 411 24-487 15-474 (489)
83 TIGR00924 yjdL_sub1_fam amino 100.0 1.6E-24 3.5E-29 213.0 39.2 410 26-487 13-466 (475)
84 PRK08633 2-acyl-glycerophospho 100.0 1.6E-25 3.5E-30 246.4 34.6 368 40-482 27-403 (1146)
85 TIGR00792 gph sugar (Glycoside 100.0 1.8E-25 3.9E-30 220.0 30.9 350 44-468 21-384 (437)
86 TIGR00806 rfc RFC reduced fola 100.0 5.7E-26 1.2E-30 211.6 25.3 175 25-242 30-208 (511)
87 PRK06814 acylglycerophosphoeth 100.0 1.3E-25 2.9E-30 246.0 32.7 346 68-482 52-415 (1140)
88 TIGR00882 2A0105 oligosacchari 99.9 3.2E-25 6.9E-30 214.9 30.7 379 28-485 7-391 (396)
89 KOG2504 Monocarboxylate transp 99.9 2.9E-27 6.4E-32 229.9 16.4 408 17-489 40-476 (509)
90 TIGR00901 2A0125 AmpG-related 99.9 2.6E-25 5.7E-30 212.5 29.3 341 40-448 5-355 (356)
91 PF06609 TRI12: Fungal trichot 99.9 2.2E-24 4.7E-29 209.7 35.1 378 28-462 49-465 (599)
92 COG0738 FucP Fucose permease [ 99.9 2.3E-24 4.9E-29 193.9 30.7 385 23-482 13-402 (422)
93 TIGR00805 oat sodium-independe 99.9 1.3E-25 2.7E-30 226.6 24.6 403 26-463 36-580 (633)
94 KOG3764 Vesicular amine transp 99.9 6.5E-26 1.4E-30 202.1 14.7 388 23-489 21-454 (464)
95 TIGR02718 sider_RhtX_FptX side 99.9 4E-23 8.8E-28 199.8 35.0 378 25-484 3-386 (390)
96 COG2807 CynX Cyanate permease 99.9 3.5E-23 7.5E-28 183.4 30.9 369 22-486 11-382 (395)
97 PRK09584 tppB putative tripept 99.9 6.4E-23 1.4E-27 202.8 33.2 404 30-486 28-476 (500)
98 TIGR01301 GPH_sucrose GPH fami 99.9 6.6E-22 1.4E-26 190.2 36.7 419 36-492 17-475 (477)
99 PTZ00207 hypothetical protein; 99.9 1.2E-22 2.6E-27 199.2 32.1 410 18-487 23-550 (591)
100 PRK15462 dipeptide/tripeptide 99.9 1.5E-20 3.3E-25 181.6 35.3 407 27-481 13-469 (493)
101 PRK10429 melibiose:sodium symp 99.9 5E-21 1.1E-25 189.2 31.3 368 31-467 14-396 (473)
102 PRK09669 putative symporter Ya 99.9 8.4E-21 1.8E-25 186.6 31.9 347 44-467 31-391 (444)
103 PF03825 Nuc_H_symport: Nucleo 99.9 1.9E-20 4.1E-25 178.2 32.1 370 31-486 10-392 (400)
104 PF11700 ATG22: Vacuole efflux 99.9 2E-19 4.3E-24 174.4 37.8 372 67-495 69-474 (477)
105 TIGR00788 fbt folate/biopterin 99.9 2.6E-21 5.6E-26 189.8 24.0 402 22-490 25-447 (468)
106 KOG2563 Permease of the major 99.9 1.6E-20 3.6E-25 171.2 26.6 411 16-497 38-458 (480)
107 PF01306 LacY_symp: LacY proto 99.9 3.9E-20 8.5E-25 172.2 25.9 379 31-492 15-404 (412)
108 KOG4686 Predicted sugar transp 99.9 2.5E-21 5.5E-26 164.5 15.1 396 19-488 40-442 (459)
109 PF13347 MFS_2: MFS/sugar tran 99.9 3.8E-19 8.3E-24 174.0 28.7 349 44-468 23-388 (428)
110 PRK11462 putative transporter; 99.9 4.7E-18 1E-22 166.8 34.0 336 64-467 41-390 (460)
111 PRK09848 glucuronide transport 99.9 3.4E-18 7.3E-23 168.4 33.1 340 45-467 31-391 (448)
112 COG2211 MelB Na+/melibiose sym 99.8 5.9E-18 1.3E-22 159.2 31.3 341 64-467 44-399 (467)
113 KOG2325 Predicted transporter/ 99.8 4.2E-19 9.2E-24 167.2 15.7 417 16-486 27-472 (488)
114 TIGR01272 gluP glucose/galacto 99.8 1.3E-17 2.8E-22 154.5 24.8 287 127-475 10-301 (310)
115 COG2270 Permeases of the major 99.8 6.3E-18 1.4E-22 153.8 21.2 372 65-491 55-431 (438)
116 COG3104 PTR2 Dipeptide/tripept 99.8 1.8E-16 3.9E-21 147.8 29.0 415 26-486 24-484 (498)
117 KOG3626 Organic anion transpor 99.8 4.3E-16 9.3E-21 153.0 26.8 404 24-463 98-648 (735)
118 PF03137 OATP: Organic Anion T 99.7 1.2E-18 2.7E-23 171.3 -0.0 408 28-464 8-514 (539)
119 PRK10642 proline/glycine betai 99.7 1.4E-15 3.1E-20 151.2 20.0 170 64-261 282-458 (490)
120 PF03209 PUCC: PUCC protein; 99.7 4.9E-13 1.1E-17 122.7 29.6 354 64-485 11-394 (403)
121 KOG2816 Predicted transporter 99.6 4.4E-13 9.5E-18 128.8 22.8 364 24-463 23-391 (463)
122 TIGR01299 synapt_SV2 synaptic 99.6 8.7E-14 1.9E-18 141.5 18.6 141 70-240 597-737 (742)
123 TIGR00880 2_A_01_02 Multidrug 99.6 1.5E-14 3.4E-19 118.0 9.9 136 74-238 4-140 (141)
124 TIGR00889 2A0110 nucleoside tr 99.6 8.4E-14 1.8E-18 135.4 15.6 158 65-241 248-407 (418)
125 PRK09528 lacY galactoside perm 99.5 3.6E-13 7.7E-18 131.8 15.4 150 64-242 258-409 (420)
126 PRK15011 sugar efflux transpor 99.5 1.5E-12 3.2E-17 126.1 19.4 145 64-238 248-392 (393)
127 PRK11551 putative 3-hydroxyphe 99.5 1.6E-12 3.4E-17 126.8 18.6 156 43-236 240-395 (406)
128 PF03092 BT1: BT1 family; Int 99.5 3.8E-12 8.2E-17 123.5 21.0 387 43-493 10-417 (433)
129 TIGR00890 2A0111 Oxalate/Forma 99.5 8.6E-13 1.9E-17 127.3 15.8 149 44-229 226-374 (377)
130 cd06174 MFS The Major Facilita 99.5 3E-12 6.5E-17 122.2 19.1 143 64-235 207-350 (352)
131 COG2271 UhpC Sugar phosphate p 99.5 6.3E-13 1.4E-17 121.3 13.1 183 288-490 23-208 (448)
132 PRK11663 regulatory protein Uh 99.5 2.3E-12 4.9E-17 126.4 18.2 175 297-491 26-201 (434)
133 PRK05122 major facilitator sup 99.5 4.9E-12 1.1E-16 123.0 18.8 142 69-239 250-391 (399)
134 PF05631 DUF791: Protein of un 99.4 6.6E-11 1.4E-15 107.1 23.7 185 18-240 33-220 (354)
135 PRK10213 nepI ribonucleoside t 99.4 4.9E-12 1.1E-16 122.3 17.8 176 296-491 22-198 (394)
136 TIGR02332 HpaX 4-hydroxyphenyl 99.4 5.4E-12 1.2E-16 122.7 17.3 178 295-492 9-193 (412)
137 TIGR00892 2A0113 monocarboxyla 99.4 2.4E-12 5.3E-17 126.7 15.1 153 41-231 259-415 (455)
138 PRK09874 drug efflux system pr 99.4 9E-12 1.9E-16 121.7 18.3 137 69-234 259-395 (408)
139 TIGR00710 efflux_Bcr_CflA drug 99.4 5.1E-12 1.1E-16 122.3 16.4 167 307-493 18-185 (385)
140 TIGR00891 2A0112 putative sial 99.4 8.5E-12 1.9E-16 121.7 18.0 179 294-492 12-192 (405)
141 PRK09556 uhpT sugar phosphate 99.4 1.1E-11 2.4E-16 122.9 18.6 183 25-234 260-446 (467)
142 PRK10054 putative transporter; 99.4 7.9E-12 1.7E-16 120.9 16.6 175 297-492 10-186 (395)
143 TIGR00899 2A0120 sugar efflux 99.4 7.7E-12 1.7E-16 120.7 16.1 145 64-238 231-375 (375)
144 PRK12382 putative transporter; 99.4 1.9E-11 4.2E-16 118.5 18.3 135 70-233 251-385 (392)
145 TIGR00924 yjdL_sub1_fam amino 99.4 8.9E-12 1.9E-16 123.0 15.9 175 295-489 11-192 (475)
146 KOG3762 Predicted transporter 99.4 7.6E-12 1.6E-16 117.3 14.2 149 319-487 396-545 (618)
147 PRK09705 cynX putative cyanate 99.4 1.9E-11 4.1E-16 118.3 17.8 164 40-242 222-387 (393)
148 PRK15462 dipeptide/tripeptide 99.4 1.4E-11 3E-16 119.8 16.7 174 295-487 10-187 (493)
149 PRK10504 putative transporter; 99.4 1.3E-11 2.8E-16 122.9 17.0 172 295-486 11-182 (471)
150 TIGR00895 2A0115 benzoate tran 99.4 6.9E-12 1.5E-16 122.0 14.7 173 299-491 22-195 (398)
151 PRK10489 enterobactin exporter 99.4 8.5E-12 1.8E-16 122.0 15.3 159 43-240 243-403 (417)
152 PF01770 Folate_carrier: Reduc 99.4 1.8E-10 3.8E-15 107.4 22.7 151 64-242 36-187 (412)
153 PF07690 MFS_1: Major Facilita 99.4 8.2E-12 1.8E-16 119.3 14.3 163 308-490 10-174 (352)
154 COG2814 AraJ Arabinose efflux 99.4 1.7E-11 3.6E-16 113.6 15.6 176 294-489 13-189 (394)
155 PRK03545 putative arabinose tr 99.4 3.2E-11 7E-16 116.8 18.5 139 64-233 237-376 (390)
156 PRK14995 methyl viologen resis 99.4 2.5E-11 5.5E-16 121.0 18.1 177 295-491 7-185 (495)
157 TIGR00711 efflux_EmrB drug res 99.4 1.2E-11 2.6E-16 123.7 15.9 174 298-491 6-180 (485)
158 TIGR00902 2A0127 phenyl propri 99.4 3.5E-11 7.6E-16 116.0 18.5 131 42-189 224-355 (382)
159 KOG3098 Uncharacterized conser 99.4 1.4E-09 3E-14 103.3 28.2 343 74-461 56-411 (461)
160 PRK12307 putative sialic acid 99.4 2.9E-11 6.2E-16 118.8 17.7 161 296-476 20-180 (426)
161 TIGR00893 2A0114 d-galactonate 99.4 1E-11 2.3E-16 120.7 14.5 161 311-491 11-172 (399)
162 PRK10473 multidrug efflux syst 99.4 3E-11 6.5E-16 117.1 17.0 169 305-493 14-183 (392)
163 PLN00028 nitrate transmembrane 99.4 2.6E-11 5.7E-16 120.1 16.8 174 296-490 38-220 (476)
164 PRK03633 putative MFS family t 99.3 5.7E-11 1.2E-15 114.6 18.4 148 44-233 221-368 (381)
165 PRK03699 putative transporter; 99.3 2.4E-11 5.3E-16 117.7 15.7 162 37-238 219-381 (394)
166 PRK09952 shikimate transporter 99.3 8.1E-11 1.7E-15 115.5 19.4 150 64-239 282-435 (438)
167 PRK10207 dipeptide/tripeptide 99.3 3.3E-11 7.2E-16 119.0 16.6 178 293-489 13-194 (489)
168 TIGR00881 2A0104 phosphoglycer 99.3 1.1E-11 2.4E-16 119.7 13.2 163 309-491 10-174 (379)
169 PRK10091 MFS transport protein 99.3 3.6E-11 7.8E-16 116.0 16.1 177 296-492 5-182 (382)
170 PRK03893 putative sialic acid 99.3 5.4E-11 1.2E-15 119.3 17.9 164 295-478 21-184 (496)
171 TIGR00897 2A0118 polyol permea 99.3 8.5E-11 1.8E-15 114.2 18.6 164 37-236 236-400 (402)
172 TIGR00883 2A0106 metabolite-pr 99.3 2.1E-11 4.5E-16 118.5 13.8 144 32-191 228-377 (394)
173 TIGR00900 2A0121 H+ Antiporter 99.3 4.3E-11 9.3E-16 114.9 15.6 139 346-487 39-177 (365)
174 PRK15402 multidrug efflux syst 99.3 1E-10 2.2E-15 114.0 17.8 159 314-492 33-192 (406)
175 PRK10077 xylE D-xylose transpo 99.3 2E-10 4.3E-15 114.7 20.2 171 41-240 289-461 (479)
176 PF11700 ATG22: Vacuole efflux 99.3 2.3E-10 4.9E-15 111.6 19.8 167 34-239 294-470 (477)
177 PRK11273 glpT sn-glycerol-3-ph 99.3 1.2E-10 2.7E-15 114.8 18.0 162 313-491 48-211 (452)
178 PRK11652 emrD multidrug resist 99.3 1.1E-10 2.4E-15 113.3 17.4 174 299-492 13-187 (394)
179 TIGR00879 SP MFS transporter, 99.3 1.2E-10 2.6E-15 116.3 17.7 184 24-240 285-474 (481)
180 PRK11010 ampG muropeptide tran 99.3 1.9E-09 4.2E-14 107.0 25.6 157 45-239 245-405 (491)
181 TIGR00712 glpT glycerol-3-phos 99.3 8.4E-11 1.8E-15 115.6 15.3 142 346-491 66-209 (438)
182 PRK15403 multidrug efflux syst 99.3 1.9E-10 4.1E-15 112.0 17.2 140 346-493 56-196 (413)
183 PRK09584 tppB putative tripept 99.3 1.8E-10 4E-15 114.4 16.9 171 296-485 23-197 (500)
184 TIGR00903 2A0129 major facilit 99.3 1.4E-10 3.1E-15 110.5 15.4 162 310-492 7-169 (368)
185 PRK11646 multidrug resistance 99.2 2.6E-10 5.6E-15 110.5 17.1 161 309-490 25-187 (400)
186 COG2270 Permeases of the major 99.2 3.1E-10 6.8E-15 104.1 16.2 177 24-239 255-431 (438)
187 PRK11102 bicyclomycin/multidru 99.2 1E-10 2.2E-15 112.9 14.0 157 315-491 12-169 (377)
188 KOG1330 Sugar transporter/spin 99.2 1.4E-11 3.1E-16 113.7 7.2 145 346-498 73-219 (493)
189 PF06813 Nodulin-like: Nodulin 99.2 4.5E-10 9.7E-15 98.5 16.1 184 21-240 1-185 (250)
190 PRK11043 putative transporter; 99.2 4.2E-10 9.1E-15 109.5 17.5 138 346-491 46-183 (401)
191 TIGR00792 gph sugar (Glycoside 99.2 5.6E-10 1.2E-14 110.0 18.3 121 66-191 255-382 (437)
192 TIGR00894 2A0114euk Na(+)-depe 99.2 1.6E-10 3.4E-15 114.8 14.1 136 346-487 81-217 (465)
193 PF05977 MFS_3: Transmembrane 99.2 6.7E-10 1.5E-14 109.5 18.2 150 42-230 237-387 (524)
194 TIGR00886 2A0108 nitrite extru 99.2 5.2E-10 1.1E-14 107.5 17.3 172 299-490 6-190 (366)
195 PRK11195 lysophospholipid tran 99.2 2.9E-10 6.3E-15 109.9 15.2 134 346-491 43-176 (393)
196 PRK11128 putative 3-phenylprop 99.2 9E-10 2E-14 106.3 18.5 119 64-189 236-355 (382)
197 PRK10406 alpha-ketoglutarate t 99.2 1.2E-09 2.6E-14 107.2 19.4 135 348-482 70-212 (432)
198 PRK15034 nitrate/nitrite trans 99.2 7.9E-10 1.7E-14 106.4 17.1 177 295-487 35-230 (462)
199 TIGR00882 2A0105 oligosacchari 99.2 8.8E-10 1.9E-14 107.0 17.8 138 64-230 250-388 (396)
200 TIGR00887 2A0109 phosphate:H+ 99.2 1.3E-09 2.8E-14 109.1 19.1 145 345-491 60-227 (502)
201 TIGR00898 2A0119 cation transp 99.2 6.2E-10 1.4E-14 111.8 15.6 138 74-240 361-498 (505)
202 TIGR00885 fucP L-fucose:H+ sym 99.2 8.8E-10 1.9E-14 106.9 15.9 173 297-486 6-204 (410)
203 TIGR00880 2_A_01_02 Multidrug 99.2 4.8E-10 1E-14 91.3 12.0 130 350-487 7-136 (141)
204 PRK15075 citrate-proton sympor 99.2 2.8E-09 6.1E-14 104.7 19.4 139 39-191 254-396 (434)
205 TIGR02718 sider_RhtX_FptX side 99.1 3.8E-09 8.2E-14 102.3 19.5 145 64-231 239-385 (390)
206 COG2223 NarK Nitrate/nitrite t 99.1 2.8E-09 6.1E-14 98.0 15.6 173 295-486 15-190 (417)
207 TIGR01272 gluP glucose/galacto 99.1 5.2E-09 1.1E-13 97.2 17.2 117 64-189 174-290 (310)
208 PRK09848 glucuronide transport 99.1 8.1E-09 1.8E-13 102.0 18.9 125 64-192 260-391 (448)
209 PRK11902 ampG muropeptide tran 99.1 2.1E-08 4.5E-13 97.6 20.4 140 64-235 241-388 (402)
210 PRK10429 melibiose:sodium symp 99.0 6.9E-09 1.5E-13 103.0 16.6 123 66-192 264-396 (473)
211 TIGR00805 oat sodium-independe 99.0 3.5E-09 7.5E-14 107.9 14.6 169 311-491 50-283 (633)
212 TIGR00926 2A1704 Peptide:H+ sy 99.0 8.7E-07 1.9E-11 89.8 31.4 165 43-233 8-178 (654)
213 TIGR00806 rfc RFC reduced fola 99.0 2.2E-08 4.8E-13 94.8 18.4 158 313-492 45-206 (511)
214 PRK10133 L-fucose transporter; 99.0 1.2E-08 2.6E-13 99.9 17.4 150 296-462 28-177 (438)
215 PF01306 LacY_symp: LacY proto 99.0 2.7E-08 5.9E-13 93.6 18.8 147 64-239 255-403 (412)
216 KOG0569 Permease of the major 99.0 2.9E-08 6.2E-13 95.3 19.3 167 40-241 287-459 (485)
217 PRK08633 2-acyl-glycerophospho 99.0 8.5E-09 1.8E-13 114.4 18.0 118 64-187 264-382 (1146)
218 TIGR00896 CynX cyanate transpo 99.0 8E-09 1.7E-13 98.7 15.3 133 42-191 216-350 (355)
219 TIGR01301 GPH_sucrose GPH fami 99.0 9.5E-09 2.1E-13 99.7 15.3 184 296-492 6-222 (477)
220 KOG2504 Monocarboxylate transp 99.0 2.3E-09 4.9E-14 105.3 11.1 176 24-237 299-476 (509)
221 TIGR00901 2A0125 AmpG-related 99.0 8.2E-09 1.8E-13 98.7 14.4 123 41-173 227-355 (356)
222 PF06963 FPN1: Ferroportin1 (F 99.0 1E-06 2.3E-11 84.1 28.2 380 27-457 6-411 (432)
223 PF03825 Nuc_H_symport: Nucleo 99.0 2.1E-08 4.7E-13 96.0 16.8 173 34-239 218-398 (400)
224 PF13347 MFS_2: MFS/sugar tran 99.0 1.2E-08 2.6E-13 100.1 14.6 147 30-192 232-387 (428)
225 KOG2615 Permease of the major 99.0 5.6E-09 1.2E-13 94.2 10.6 113 342-463 69-181 (451)
226 PTZ00207 hypothetical protein; 98.9 3E-08 6.6E-13 98.4 16.7 167 306-489 39-206 (591)
227 KOG3764 Vesicular amine transp 98.9 2.3E-09 5E-14 97.2 7.9 137 346-490 111-248 (464)
228 PRK09669 putative symporter Ya 98.9 7.8E-08 1.7E-12 94.8 18.9 120 69-192 265-391 (444)
229 PRK06814 acylglycerophosphoeth 98.9 2.2E-08 4.8E-13 110.8 16.5 118 64-187 257-394 (1140)
230 COG0477 ProP Permeases of the 98.9 8.2E-08 1.8E-12 89.9 17.3 161 33-228 12-176 (338)
231 PF02487 CLN3: CLN3 protein; 98.9 7E-07 1.5E-11 83.6 22.0 137 70-239 61-198 (402)
232 KOG2532 Permease of the major 98.9 2.9E-08 6.3E-13 96.3 12.9 137 346-488 78-215 (466)
233 TIGR00769 AAA ADP/ATP carrier 98.9 7.5E-05 1.6E-09 72.5 36.0 123 66-188 41-190 (472)
234 PF06609 TRI12: Fungal trichot 98.9 7.1E-08 1.5E-12 95.2 15.4 132 346-486 83-214 (599)
235 TIGR00788 fbt folate/biopterin 98.8 2.9E-08 6.3E-13 97.9 12.3 159 64-238 284-447 (468)
236 KOG4686 Predicted sugar transp 98.8 5.3E-08 1.2E-12 84.2 11.5 145 64-236 296-442 (459)
237 COG2211 MelB Na+/melibiose sym 98.8 2.9E-07 6.3E-12 87.7 17.7 162 64-238 268-438 (467)
238 KOG0637 Sucrose transporter an 98.8 1.3E-08 2.8E-13 94.3 8.2 133 44-186 53-202 (498)
239 KOG3574 Acetyl-CoA transporter 98.8 5.6E-07 1.2E-11 81.3 17.9 151 19-182 27-188 (510)
240 KOG0255 Synaptic vesicle trans 98.8 6.7E-08 1.4E-12 97.4 13.3 136 346-492 123-258 (521)
241 PF06813 Nodulin-like: Nodulin 98.8 1.2E-07 2.5E-12 83.5 12.3 171 305-491 13-184 (250)
242 KOG0253 Synaptic vesicle trans 98.7 9.2E-08 2E-12 86.0 11.1 101 77-183 390-490 (528)
243 PF05978 UNC-93: Ion channel r 98.7 4.6E-07 9.9E-12 73.4 13.7 110 71-187 40-149 (156)
244 COG3104 PTR2 Dipeptide/tripept 98.7 9.4E-08 2E-12 90.2 11.0 183 295-490 22-207 (498)
245 PRK11462 putative transporter; 98.7 1.7E-06 3.6E-11 85.4 20.3 120 68-191 263-389 (460)
246 PF06779 DUF1228: Protein of u 98.7 1.1E-07 2.4E-12 67.1 8.5 76 35-120 4-79 (85)
247 COG2807 CynX Cyanate permease 98.7 1.1E-06 2.3E-11 79.5 15.6 154 39-231 224-379 (395)
248 KOG4332 Predicted sugar transp 98.7 1.9E-06 4.1E-11 74.1 16.0 86 64-156 68-154 (454)
249 KOG3810 Micronutrient transpor 98.7 5.1E-07 1.1E-11 80.5 13.0 369 64-487 37-419 (433)
250 COG0738 FucP Fucose permease [ 98.6 2.2E-06 4.8E-11 78.8 15.7 173 297-486 16-207 (422)
251 KOG0252 Inorganic phosphate tr 98.6 4.2E-07 9E-12 84.5 11.0 114 344-458 87-200 (538)
252 KOG0254 Predicted transporter 98.5 1.4E-06 3E-11 87.5 14.2 138 346-492 94-233 (513)
253 KOG2533 Permease of the major 98.5 3.7E-06 8E-11 82.1 15.4 140 346-493 86-232 (495)
254 PF03209 PUCC: PUCC protein; 98.5 2E-05 4.4E-10 73.2 19.3 154 64-233 240-394 (403)
255 PF13000 Acatn: Acetyl-coenzym 98.5 8.3E-06 1.8E-10 77.1 16.2 148 27-186 4-177 (544)
256 TIGR00939 2a57 Equilibrative N 98.3 0.0007 1.5E-08 65.7 26.4 97 126-242 105-201 (437)
257 KOG3762 Predicted transporter 98.3 2.2E-06 4.8E-11 81.4 8.5 141 64-233 402-543 (618)
258 KOG2325 Predicted transporter/ 98.3 3.6E-06 7.8E-11 80.6 10.1 145 346-494 76-235 (488)
259 PF12832 MFS_1_like: MFS_1 lik 98.3 7.5E-06 1.6E-10 57.5 8.3 68 31-108 8-75 (77)
260 KOG1479 Nucleoside transporter 98.2 0.00043 9.4E-09 64.7 21.4 175 37-242 32-209 (406)
261 PF00083 Sugar_tr: Sugar (and 98.2 8.5E-08 1.8E-12 95.0 -3.8 141 346-491 51-194 (451)
262 KOG1237 H+/oligopeptide sympor 98.1 0.0033 7.1E-08 63.0 26.6 160 41-233 56-241 (571)
263 PF00854 PTR2: POT family; In 98.1 4.9E-05 1.1E-09 73.0 12.3 114 99-235 2-121 (372)
264 TIGR00926 2A1704 Peptide:H+ sy 98.1 0.0001 2.2E-09 75.0 15.0 133 355-487 37-180 (654)
265 PF05631 DUF791: Protein of un 98.0 0.00044 9.5E-09 63.4 16.6 163 310-493 50-221 (354)
266 PF03219 TLC: TLC ATP/ADP tran 98.0 0.019 4.1E-07 56.4 34.5 162 16-188 17-205 (491)
267 KOG2816 Predicted transporter 98.0 0.00022 4.7E-09 69.4 15.2 122 64-192 273-395 (463)
268 KOG2563 Permease of the major 97.8 0.0005 1.1E-08 64.6 12.6 121 343-464 81-202 (480)
269 COG3202 ATP/ADP translocase [E 97.5 0.093 2E-06 50.5 28.9 160 18-188 22-209 (509)
270 TIGR00769 AAA ADP/ATP carrier 97.5 0.013 2.9E-07 57.1 18.4 109 354-462 57-189 (472)
271 PF07672 MFS_Mycoplasma: Mycop 97.5 0.0013 2.7E-08 57.4 10.1 113 347-460 147-264 (267)
272 PRK03612 spermidine synthase; 97.3 0.019 4.1E-07 57.3 18.0 123 64-188 46-170 (521)
273 KOG3098 Uncharacterized conser 97.2 0.045 9.8E-07 52.9 18.2 112 74-186 285-411 (461)
274 PF03092 BT1: BT1 family; Int 97.2 0.0027 5.8E-08 62.1 10.1 164 62-241 249-417 (433)
275 PF05978 UNC-93: Ion channel r 97.2 0.029 6.4E-07 45.6 14.3 104 350-462 46-149 (156)
276 PF12832 MFS_1_like: MFS_1 lik 97.1 0.0027 5.8E-08 44.6 7.1 60 308-379 14-73 (77)
277 KOG3626 Organic anion transpor 97.1 0.0073 1.6E-07 61.2 12.3 149 347-495 138-349 (735)
278 PF01733 Nucleoside_tran: Nucl 96.9 0.00021 4.5E-09 66.4 -0.4 113 346-458 187-304 (309)
279 PF06963 FPN1: Ferroportin1 (F 96.8 0.14 3E-06 49.6 17.9 139 346-486 43-197 (432)
280 PF03137 OATP: Organic Anion T 96.7 0.00028 6.1E-09 70.5 -1.0 146 346-491 43-252 (539)
281 PF01770 Folate_carrier: Reduc 96.7 0.089 1.9E-06 50.1 15.1 126 358-492 58-185 (412)
282 PF02487 CLN3: CLN3 protein; 96.6 0.043 9.3E-07 52.1 12.4 113 65-187 278-395 (402)
283 PF00854 PTR2: POT family; In 96.5 0.015 3.4E-07 55.8 9.6 117 372-488 2-122 (372)
284 PF03219 TLC: TLC ATP/ADP tran 96.1 0.17 3.6E-06 49.9 14.2 111 353-463 71-205 (491)
285 KOG3880 Predicted small molecu 96.1 0.036 7.7E-07 49.6 8.4 138 70-239 64-202 (409)
286 KOG3097 Predicted membrane pro 95.9 1.3 2.9E-05 40.4 22.9 102 78-186 68-180 (390)
287 COG0477 ProP Permeases of the 95.9 0.13 2.9E-06 47.4 12.2 126 346-477 44-173 (338)
288 KOG0637 Sucrose transporter an 95.6 0.025 5.4E-07 53.6 5.6 152 297-460 35-201 (498)
289 COG3202 ATP/ADP translocase [E 95.4 1 2.2E-05 43.6 15.6 111 353-463 74-209 (509)
290 PF06779 DUF1228: Protein of u 94.7 0.21 4.7E-06 35.5 7.1 73 308-392 6-78 (85)
291 PRK03612 spermidine synthase; 94.2 1.3 2.9E-05 44.4 14.0 48 436-483 143-191 (521)
292 KOG3574 Acetyl-CoA transporter 92.9 1.7 3.7E-05 40.7 11.0 35 425-459 156-190 (510)
293 TIGR00939 2a57 Equilibrative N 90.7 3 6.5E-05 40.9 11.0 118 69-187 308-432 (437)
294 KOG2601 Iron transporter [Inor 90.0 17 0.00037 34.3 14.4 54 429-482 166-219 (503)
295 KOG1237 H+/oligopeptide sympor 89.6 19 0.00041 36.7 15.9 134 353-486 85-242 (571)
296 KOG1479 Nucleoside transporter 88.9 23 0.00049 34.0 17.0 75 412-488 127-203 (406)
297 KOG4332 Predicted sugar transp 88.0 1.4 3E-05 39.1 5.7 41 346-386 77-117 (454)
298 COG4262 Predicted spermidine s 85.2 33 0.00071 32.1 14.4 119 64-186 39-162 (508)
299 PF13000 Acatn: Acetyl-coenzym 84.2 20 0.00043 35.4 11.8 38 425-462 141-178 (544)
300 KOG2601 Iron transporter [Inor 82.9 6.4 0.00014 37.0 7.6 78 25-111 29-106 (503)
301 PF11947 DUF3464: Protein of u 82.2 3.8 8.3E-05 32.9 5.3 34 420-453 112-145 (153)
302 KOG3880 Predicted small molecu 79.9 4.8 0.0001 36.6 5.6 113 68-186 288-401 (409)
303 PF07672 MFS_Mycoplasma: Mycop 79.6 25 0.00055 31.3 9.9 109 69-179 142-255 (267)
304 PF01733 Nucleoside_tran: Nucl 74.9 0.96 2.1E-05 42.1 0.0 115 72-186 186-307 (309)
305 KOG3810 Micronutrient transpor 70.7 37 0.0008 31.9 8.9 95 70-170 273-369 (433)
306 COG5336 Uncharacterized protei 67.9 18 0.00039 26.8 5.1 33 356-388 57-90 (116)
307 PF06912 DUF1275: Protein of u 67.0 84 0.0018 27.1 16.9 25 165-189 164-188 (209)
308 COG5336 Uncharacterized protei 66.4 25 0.00055 26.1 5.6 34 433-466 37-70 (116)
309 PF10183 ESSS: ESSS subunit of 64.1 31 0.00068 25.9 6.1 41 200-240 44-85 (105)
310 TIGR02230 ATPase_gene1 F0F1-AT 62.6 61 0.0013 24.0 7.7 27 165-191 45-71 (100)
311 KOG2881 Predicted membrane pro 58.7 1.3E+02 0.0029 26.7 12.5 28 355-382 254-281 (294)
312 PRK10263 DNA translocase FtsK; 55.0 96 0.0021 34.8 9.9 21 77-97 61-81 (1355)
313 PRK10263 DNA translocase FtsK; 51.5 2.7E+02 0.006 31.5 12.5 21 450-470 143-163 (1355)
314 COG2274 SunT ABC-type bacterio 51.2 2.2E+02 0.0048 30.1 11.7 22 347-368 163-184 (709)
315 PF03547 Mem_trans: Membrane t 50.2 1.1E+02 0.0024 29.4 9.1 27 432-459 90-116 (385)
316 KOG3097 Predicted membrane pro 49.2 2.3E+02 0.005 26.6 10.6 28 355-382 72-99 (390)
317 PF02990 EMP70: Endomembrane p 49.1 3E+02 0.0066 27.9 12.2 24 347-370 303-326 (521)
318 COG3619 Predicted membrane pro 48.4 1.9E+02 0.0041 25.4 18.1 123 67-191 54-196 (226)
319 COG1288 Predicted membrane pro 46.6 2.9E+02 0.0063 27.0 11.2 24 210-233 213-236 (481)
320 TIGR01666 YCCS hypothetical me 46.5 2.1E+02 0.0045 30.3 10.7 49 89-142 44-96 (704)
321 PRK11469 hypothetical protein; 45.7 1.9E+02 0.0041 24.6 16.5 42 346-387 140-181 (188)
322 PF06027 DUF914: Eukaryotic pr 45.1 2.7E+02 0.0059 26.2 14.6 12 475-486 292-303 (334)
323 PF11947 DUF3464: Protein of u 44.8 1.3E+02 0.0028 24.5 6.9 49 127-178 97-145 (153)
324 TIGR01667 YCCS_YHJK integral m 44.2 2.1E+02 0.0045 30.3 10.3 51 87-142 42-96 (701)
325 PF05297 Herpes_LMP1: Herpesvi 42.5 8.3 0.00018 34.1 0.0 59 434-492 131-189 (381)
326 PF03606 DcuC: C4-dicarboxylat 37.5 1.4E+02 0.003 29.8 7.6 14 362-375 105-118 (465)
327 PF02694 UPF0060: Uncharacteri 36.9 70 0.0015 23.9 4.0 52 68-119 54-105 (107)
328 COG1268 BioY Uncharacterized c 36.8 1E+02 0.0022 26.0 5.5 24 74-97 88-111 (184)
329 COG4769 Predicted membrane pro 35.1 40 0.00087 27.4 2.7 52 76-139 81-132 (181)
330 PF15061 DUF4538: Domain of un 33.7 64 0.0014 21.0 2.9 21 466-486 4-24 (58)
331 PF08611 DUF1774: Fungal prote 33.4 2E+02 0.0043 21.2 6.0 22 465-486 50-71 (97)
332 PF11151 DUF2929: Protein of u 33.0 1.4E+02 0.0031 19.5 6.9 30 211-240 27-56 (57)
333 PRK02237 hypothetical protein; 33.0 1.1E+02 0.0025 22.9 4.6 51 69-119 57-107 (109)
334 PF01102 Glycophorin_A: Glycop 32.1 44 0.00095 25.9 2.4 12 484-495 84-95 (122)
335 TIGR02230 ATPase_gene1 F0F1-AT 31.1 2.2E+02 0.0049 21.2 7.2 30 356-385 58-87 (100)
336 PF15048 OSTbeta: Organic solu 30.8 67 0.0014 24.7 3.1 24 463-486 31-54 (125)
337 PRK11469 hypothetical protein; 29.7 3.5E+02 0.0076 23.0 8.5 32 82-113 149-180 (188)
338 PF02632 BioY: BioY family; I 29.6 1.1E+02 0.0023 24.8 4.5 26 74-99 59-84 (148)
339 PF12805 FUSC-like: FUSC-like 28.9 3.7E+02 0.0079 24.6 8.4 37 101-142 2-38 (284)
340 KOG4830 Predicted sugar transp 28.7 37 0.0008 30.3 1.7 63 28-100 22-93 (412)
341 KOG4255 Uncharacterized conser 28.6 5E+02 0.011 24.4 10.9 60 99-159 80-144 (439)
342 KOG4112 Signal peptidase subun 27.8 2.2E+02 0.0047 20.7 5.0 42 442-486 27-68 (101)
343 COG1971 Predicted membrane pro 27.6 3.8E+02 0.0083 22.7 17.2 40 348-387 144-183 (190)
344 PRK12405 electron transport co 27.3 4.4E+02 0.0095 23.3 10.7 12 475-486 191-202 (231)
345 COG2076 EmrE Membrane transpor 27.2 2.8E+02 0.006 21.0 6.5 44 346-390 6-49 (106)
346 PF00939 Na_sulph_symp: Sodium 26.7 5.8E+02 0.013 25.4 10.1 6 93-98 113-118 (471)
347 PF04281 Tom22: Mitochondrial 26.6 2.3E+02 0.005 22.6 5.6 25 151-175 59-83 (137)
348 PF01914 MarC: MarC family int 26.6 4.2E+02 0.0091 22.8 9.0 64 421-485 22-86 (203)
349 PF05545 FixQ: Cbb3-type cytoc 26.4 1E+02 0.0022 19.2 3.1 14 477-490 20-33 (49)
350 PF04277 OAD_gamma: Oxaloaceta 24.8 1.2E+02 0.0027 21.1 3.6 22 466-487 11-32 (79)
351 TIGR00267 conserved hypothetic 24.3 4.2E+02 0.009 22.0 11.4 30 355-384 127-156 (169)
352 COG4736 CcoQ Cbb3-type cytochr 23.9 1.2E+02 0.0026 20.0 3.0 20 476-495 19-38 (60)
353 PRK10697 DNA-binding transcrip 23.9 3E+02 0.0064 21.3 5.6 28 215-242 36-69 (118)
354 PF10785 NADH-u_ox-rdase: NADH 23.0 2.1E+02 0.0044 20.6 4.4 41 80-120 30-77 (86)
355 PF04024 PspC: PspC domain; I 22.6 2.3E+02 0.005 18.7 4.3 29 212-240 28-60 (61)
356 TIGR02840 spore_YtaF putative 21.3 5.4E+02 0.012 22.2 16.3 17 351-367 168-184 (206)
357 PF13493 DUF4118: Domain of un 21.3 3.2E+02 0.0069 20.1 5.6 25 74-98 81-105 (105)
358 PF04281 Tom22: Mitochondrial 21.1 1.7E+02 0.0038 23.2 4.0 51 427-486 60-110 (137)
359 COG2076 EmrE Membrane transpor 20.5 3.8E+02 0.0083 20.2 6.6 66 86-156 18-83 (106)
360 PF11299 DUF3100: Protein of u 20.3 1E+02 0.0023 26.9 2.8 55 132-187 176-230 (241)
361 PTZ00370 STEVOR; Provisional 20.1 1.5E+02 0.0032 26.9 3.8 31 466-496 256-286 (296)
362 TIGR01478 STEVOR variant surfa 20.1 1.4E+02 0.0031 26.9 3.7 31 466-496 260-290 (295)
No 1
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=2.6e-45 Score=365.09 Aligned_cols=482 Identities=61% Similarity=1.012 Sum_probs=339.6
Q ss_pred HHHHcccchhHHHHHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhh
Q 010212 11 ALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGW 90 (515)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~ 90 (515)
..++.+..+++++++.++.++.+.+++|...++.+.|.+.++++.. +.+.+..+.+++.+.+.++..++++++|+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ig~~ig~~~~g~ 78 (502)
T TIGR00887 4 EADTAPFGWQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHG-----KGPLPSSVSAAVNGSASIGTLAGQLFFGW 78 (502)
T ss_pred hhhccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-----cccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3466778889999999999999999999999999999887764211 12466778899999999999999999999
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHH
Q 010212 91 LGDKMGRKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFA 170 (515)
Q Consensus 91 l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~ 170 (515)
++||+|||+++.++.+++.+++++++++++......++.++++|+++|++.|...+....+++|++|+++|++++++.+.
T Consensus 79 l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~ 158 (502)
T TIGR00887 79 LADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFA 158 (502)
T ss_pred HHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHH
Confidence 99999999999999999999999998876532212257899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhcCCchhhHHHHhccH
Q 010212 171 MQGFGILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKMPETARYTALVAKNA 250 (515)
Q Consensus 171 ~~~~G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~ 250 (515)
...+|.++++.++..+...............+.........+++||+.+.+.++++++.++..+++||||+|+..+++++
T Consensus 159 ~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~ 238 (502)
T TIGR00887 159 MQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYTADVAKDV 238 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhCcch
Confidence 99999999999988775433210000000000000000012357999999998888888888889999999975555544
Q ss_pred HHHHHHHHHHHHhhhhHhhhh---HHHh---hcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhHh
Q 010212 251 KQAAADMSKVLQVELEAEQEK---VEQE---KGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTAI 324 (515)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~---~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (515)
+++.+.+.+..+.+.+++.++ .+++ .+.+.++.++.+..++..+..+.....++...+.+|+...+.|.++++.
T Consensus 239 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~~ 318 (502)
T TIGR00887 239 EQAASDMSAVLQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSAI 318 (502)
T ss_pred HHHHHHHHHHhccccccCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHH
Confidence 445555555443221111111 1111 1123444554433333334444444555556667788888899999888
Q ss_pred cccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHH
Q 010212 325 GWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGF 404 (515)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (515)
|+++...+...................++.+++.+++++++||+|||+.++.+..+++++++++....... .....
T Consensus 319 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~----~~~~~ 394 (502)
T TIGR00887 319 GYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHL----STHGF 394 (502)
T ss_pred cCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhc----chhHH
Confidence 87665322211111111222234445556777888999999999999998888887777776665433111 01112
Q ss_pred HHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhc----------cCchHHHHHH
Q 010212 405 VVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADT----------SGVKKALLIL 474 (515)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~----------~g~~~~~~~~ 474 (515)
.....+...+...+..+..+.+..|.+|++.|+++.|+.+.+++++++++|.+.+++.+. .++...+.++
T Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~ 474 (502)
T TIGR00887 395 LAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIF 474 (502)
T ss_pred HHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHH
Confidence 222222233344555677788889999999999999999999999999999999999874 3455678888
Q ss_pred HHHHHHHHHHHHhccccCCCChhhhhh
Q 010212 475 GGANFLGMLFTFLVPESKGKSLEEMSG 501 (515)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (515)
+++++++.+..+++||+++++.+|.++
T Consensus 475 ~~~~~~~~i~~~~lpEt~~~~leei~~ 501 (502)
T TIGR00887 475 ALFMFLGILFTLLIPETKGKSLEELSG 501 (502)
T ss_pred HHHHHHHHHHheEeccCCCCCHHhhhC
Confidence 888887777666789999988877644
No 2
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-46 Score=338.22 Aligned_cols=472 Identities=67% Similarity=1.132 Sum_probs=397.1
Q ss_pred chhHHHHHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhh
Q 010212 18 QWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGR 97 (515)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Gr 97 (515)
.|+..+.+.+...+.+.++||..+++.+.|.+...+++.++.. .+.++...+.+..+..+|..+|+++.|++.||+||
T Consensus 36 qw~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~--g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GR 113 (538)
T KOG0252|consen 36 QWKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESG--GHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGR 113 (538)
T ss_pred hHHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCC--CcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 7788888999999999999999999999999998886655444 56788889999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHhhhcCCCCch-hHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHH
Q 010212 98 KRVYGMTLMMMVICSLASGLSFGKEPK-AVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGI 176 (515)
Q Consensus 98 r~~l~~~~~~~~i~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~ 176 (515)
|+++...++++.++++++++....+++ +.+.++...|++.|+|.|+-+|...+..+|....++||...+.+.+..+.|.
T Consensus 114 K~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~Gi 193 (538)
T KOG0252|consen 114 KKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGI 193 (538)
T ss_pred hhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhH
Confidence 999999999999999999988776666 6688999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhcCCchhhHHHHhccHHHHHHH
Q 010212 177 LSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKMPETARYTALVAKNAKQAAAD 256 (515)
Q Consensus 177 ~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~ 256 (515)
+.|.+++..+...+....+.. .+....+.-||..+-++++++++.+...+.+||++++..+.+++.+.+.++
T Consensus 194 laG~ivt~Iv~~~fe~~~~~~--------~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~~~a~~d 265 (538)
T KOG0252|consen 194 LAGGIVALIVSAIFEKIFNGP--------STYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYTALVSKKLKQAAGD 265 (538)
T ss_pred hhccHHHHHHHHHHhccCCCC--------CCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhhcCHhhhhhc
Confidence 999999988887666433221 111234456999999999999999999999999999976677666666655
Q ss_pred HHHHHHhhhhHhhhhHHH-hhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccchh
Q 010212 257 MSKVLQVELEAEQEKVEQ-EKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNA 335 (515)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (515)
..+....+.+++...... +.+.+...+|.....+++.+.++.....|+...+.+|...+++..++++.|+.+.....
T Consensus 266 ~~k~~~~~~~~~~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~-- 343 (538)
T KOG0252|consen 266 MKKVLSVDIEAESTAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTY-- 343 (538)
T ss_pred cccccccccchhhccccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchH--
Confidence 554444433333322111 22233344566666666778899999999999999999999999999999999887555
Q ss_pred HHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHh
Q 010212 336 IEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFS 415 (515)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (515)
......+.....+...+.++|.++...++|++|||+..+.+++++.+.++.++....+ ........+...+..++.
T Consensus 344 -~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~---~~~~~Gf~v~y~l~~ff~ 419 (538)
T KOG0252|consen 344 -HELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQ---LENTIGFVVLYSLTFFFG 419 (538)
T ss_pred -HHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCccc---ccccCceeehHHHHHHHH
Confidence 4444566667778888888999999999999999999999999999999888876632 224566778888889999
Q ss_pred hcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhh-----ccCchHHHHHHHHHHHHHHHHHHhccc
Q 010212 416 NFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLAD-----TSGVKKALLILGGANFLGMLFTFLVPE 490 (515)
Q Consensus 416 ~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~-----~~g~~~~~~~~~~~~~~~~~~~~~~~~ 490 (515)
+++.+.....+.+|.+|++.|++..|+...++-.|++++...+.++.+ ..|.+.++++++++++++.+..+++||
T Consensus 420 NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~pE 499 (538)
T KOG0252|consen 420 NFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLIPE 499 (538)
T ss_pred hcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEeec
Confidence 999999999999999999999999999999999999999999999999 788999999999999999999999999
Q ss_pred cCCCChhhhhhhhhc
Q 010212 491 SKGKSLEEMSGEAEE 505 (515)
Q Consensus 491 ~~~~~~~~~~~~~~~ 505 (515)
+|+++++|.+++.+.
T Consensus 500 tk~~~leei~~e~~~ 514 (538)
T KOG0252|consen 500 TKGKSLEEISNEEES 514 (538)
T ss_pred ccccCHHHhcChhhc
Confidence 999999988655443
No 3
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=6.4e-42 Score=344.46 Aligned_cols=448 Identities=19% Similarity=0.323 Sum_probs=333.7
Q ss_pred HHHcccchhHHHHHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhh
Q 010212 12 LDVAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWL 91 (515)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l 91 (515)
.++.+..+++|.++++++++.+..+++...++.++|.+.+++ +++..+.+++.+++.++.+++++++|++
T Consensus 156 l~~~~~~~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~----------gls~~~~g~l~s~~~lG~iiG~li~G~L 225 (742)
T TIGR01299 156 IQECGHGRFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDL----------CIPDSGKGMLGLIVYLGMMVGAFFWGGL 225 (742)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------CCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445566788999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHH
Q 010212 92 GDKMGRKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAM 171 (515)
Q Consensus 92 ~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~ 171 (515)
+||+|||++++++++++++++++++++++ ++.++++|++.|++.|+..+...+++.|++|+++|++.++++..+
T Consensus 226 sDR~GRR~~lii~lil~~i~~ll~afa~s------~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~ 299 (742)
T TIGR01299 226 ADKLGRKQCLLICLSVNGFFAFFSSFVQG------YGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMF 299 (742)
T ss_pred HHHhCcHHHHHHHHHHHHHHHHHHHHHhh------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999988 899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhcCCchhhHHHHhccHH
Q 010212 172 QGFGILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKMPETARYTALVAKNAK 251 (515)
Q Consensus 172 ~~~G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~ 251 (515)
..+|.++++.++..+....+..... .......+||+.+++.++++++.++..+++||+|+|+ ..+++.+
T Consensus 300 ~~iG~ila~~la~~il~~~G~~~~~----------g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL-~~~gr~~ 368 (742)
T TIGR01299 300 WMIGGIYAAAMAWAIIPHYGWSFQM----------GSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFF-LENGKHD 368 (742)
T ss_pred HHHHHHHHHHHHHHHHHhccchhcc----------ccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHH-HHCCCHH
Confidence 9999999999887776432210000 0001335799999998888888888888999999997 3344556
Q ss_pred HHHHHHHHHHHhhhh-----Hhh------hh--HHH-----hhcC-C---------------cchhhhhhhhhhhhHHHH
Q 010212 252 QAAADMSKVLQVELE-----AEQ------EK--VEQ-----EKGK-N---------------DFGLFSAKFVRRHGLHLI 297 (515)
Q Consensus 252 ~~~~~~~~~~~~~~~-----~~~------~~--~~~-----~~~~-~---------------~~~~~~~~~~~~~~~~~~ 297 (515)
++.+.+++..+.+.. .+. +. .++ +++. + .+..++....++..+..+
T Consensus 369 eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl 448 (742)
T TIGR01299 369 EAWMILKLIHDTNMRAKGHPEKVFSVNHIKTIHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITI 448 (742)
T ss_pred HHHHHHHHHhcCCCCCcCchhHHHHHHHHHHhhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHH
Confidence 666666655433210 000 00 000 0000 0 001122222223345667
Q ss_pred HHHHHHHHHHHHHHHHhhhhhHHHhHh---c-------------------ccCCc-------------ccc---------
Q 010212 298 GTTVTWFLLDVAYYSQNLFQKDIFTAI---G-------------------WIPKA-------------KTM--------- 333 (515)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-------------------~~~~~-------------~~~--------- 333 (515)
.+.+.|++..+.+|+...|.|.+++.. . ++... .+.
T Consensus 449 ~l~~~wf~~~~~yygl~~w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (742)
T TIGR01299 449 KLMGVWFTLSFGYYGLSVWFPDMIKHLQADDYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFED 528 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchhccccccchhhhhccccccccchhhccccccccccc
Confidence 788889999999999999999886542 0 00000 000
Q ss_pred -------------------------------h---h-------------------------HHHHHHHHHHHHHHHHhhh
Q 010212 334 -------------------------------N---A-------------------------IEEVYKIARAQTLIALCST 354 (515)
Q Consensus 334 -------------------------------~---~-------------------------~~~~~~~~~~~~~~~~~~~ 354 (515)
+ . .............+..++.
T Consensus 529 ~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~ 608 (742)
T TIGR01299 529 SLFEECTFDDVTSSNTFFKNCTFIDTLFENTDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAV 608 (742)
T ss_pred ccccccceeeccccchhhhccchhhhhccccchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHH
Confidence 0 0 0000112234456667888
Q ss_pred hhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchh
Q 010212 355 VPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPAR 434 (515)
Q Consensus 355 ~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 434 (515)
+++.+++++++||+|||+++..+.++.+++++++.+.. +....+++.+ +.+++..+..+..+++++|.+|++
T Consensus 609 i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~-------s~~~ll~~~~-l~g~~~~~~~~~~~a~~aEl~Pt~ 680 (742)
T TIGR01299 609 LPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGN-------SESAMIALLC-LFGGLSIAAWNALDVLTVELYPSD 680 (742)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHc-------cHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHcCHH
Confidence 99999999999999999999999888888877766543 1222222222 223333334567788999999999
Q ss_pred hhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHHhccccCCCC
Q 010212 435 LRSTCHGISAASGKAGAIVGAFGFLYLADTSGVKKALLILGGANFLGMLFTFLVPESKGKS 495 (515)
Q Consensus 435 ~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (515)
.|++++|+.+....+|.+++|++.+.+.+. +....|++++++.+++.++.+++||++++.
T Consensus 681 ~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~~LPET~~~~ 740 (742)
T TIGR01299 681 KRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLALKLPDTRGQV 740 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHhCCCCcccc
Confidence 999999999999999999999999988764 456778888888888877777889988764
No 4
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.7e-41 Score=320.12 Aligned_cols=448 Identities=21% Similarity=0.296 Sum_probs=344.0
Q ss_pred hHHHHHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhcc----CCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 010212 20 YHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYK----EGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKM 95 (515)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~ 95 (515)
+-........++.+-++|....+++..+.+.+..... .+.+.+++.-+...+.+++++.+|.++|++..|.++||+
T Consensus 8 ~L~~~~~~~~~gsf~~Gy~~~~iNap~~~i~~f~n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~ 87 (485)
T KOG0569|consen 8 RLLLAVIVATLGSFQFGYNIGVVNAPQELIKSFINETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRF 87 (485)
T ss_pred HHHHHHHHHHHhchhhhhhheecCchHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3334445556666778888888877765554433111 222222222334567889999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHH
Q 010212 96 GRKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFG 175 (515)
Q Consensus 96 Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G 175 (515)
|||..+.++.++..++.++..++... ..++.++++|++.|+..|......+.++.|..|.+.||......+.+..+|
T Consensus 88 GRK~~l~~~~~l~~~~~~~~~~s~~~---~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g 164 (485)
T KOG0569|consen 88 GRKNALLLSNLLAVLAALLMGLSKSA---PSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIG 164 (485)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHH
Confidence 99999999999998888877765432 118999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhcCCchhhHHHHhccHHHHHH
Q 010212 176 ILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKMPETARYTALVAKNAKQAAA 255 (515)
Q Consensus 176 ~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~ 255 (515)
.+++..++..-. + .....|++.+.+..+++++.++...++||||+|+..++++++|+.+
T Consensus 165 ~ll~~~~~l~~i--l-------------------Gt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~ 223 (485)
T KOG0569|consen 165 ILLGQVLGLPSL--L-------------------GTEDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEEEARK 223 (485)
T ss_pred HHHHHHHccHHh--c-------------------CCCcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHHHHHH
Confidence 999977764332 2 2445699999999999999999999999999999777888888888
Q ss_pred HHHHHHHhhhhHhh-----hhHHHh-----hcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhHhc
Q 010212 256 DMSKVLQVELEAEQ-----EKVEQE-----KGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTAIG 325 (515)
Q Consensus 256 ~~~~~~~~~~~~~~-----~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (515)
.++..++.+.++++ ++.+++ ++.+.++.++++..|+. ..+.+.+.........+....|...++.+.|
T Consensus 224 sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~--~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG 301 (485)
T KOG0569|consen 224 ALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRP--LLIGIVVSFAQQFSGINAIFFYSTSIFKTAG 301 (485)
T ss_pred HHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHH--HHHHHHHHHHHHhcCcceeHHHHHHHHHHcC
Confidence 88888766432211 111111 33345677777777664 3333444444444566677778888888888
Q ss_pred ccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCC--chHH
Q 010212 326 WIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPD--HRIG 403 (515)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 403 (515)
.+++... .......+..++.++++.++.||+|||++++.+..++.++.+++........... ..+.
T Consensus 302 ~~~~~a~------------~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~ 369 (485)
T KOG0569|consen 302 FTPEEAQ------------YANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYL 369 (485)
T ss_pred CCHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 7766533 2666777778888899999999999999999999999988888776543221111 1223
Q ss_pred HHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCchHHHHHHHHHHHHHHH
Q 010212 404 FVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSGVKKALLILGGANFLGML 483 (515)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~ 483 (515)
.+....+....++.|..|+.+-+.+|++|++.|..+.++...++++.+++....+..+.+..|. ..|+++.+.+.+..+
T Consensus 370 ~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i 448 (485)
T KOG0569|consen 370 CIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLI 448 (485)
T ss_pred HHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHH
Confidence 4556666677888889999999999999999999999999999999999999999999998887 677778888887777
Q ss_pred HHH-hccccCCCChhhhhhhhhcc
Q 010212 484 FTF-LVPESKGKSLEEMSGEAEEE 506 (515)
Q Consensus 484 ~~~-~~~~~~~~~~~~~~~~~~~~ 506 (515)
..+ .+||||+|+..|+.++.+++
T Consensus 449 ~~~~~lPETkgr~~~eI~~~~~~~ 472 (485)
T KOG0569|consen 449 YLYRYLPETKGRTPYEIIEELEKR 472 (485)
T ss_pred HHHHhCcccCCCCHHHHHHHHHhC
Confidence 777 89999999998887776544
No 5
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=1.5e-40 Score=331.06 Aligned_cols=453 Identities=22% Similarity=0.280 Sum_probs=310.5
Q ss_pred cchhHHHHHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhh
Q 010212 17 TQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMG 96 (515)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~G 96 (515)
..++..+.+.++.++.+.++++...+++..|.+++++.. ....+.+.+..+.+++.+++.++..++++++|+++||+|
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~G 83 (479)
T PRK10077 6 NSSYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVA--PQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFG 83 (479)
T ss_pred cchHHHHHHHHHHHHHHhcCcccceehHhHHHHHHHhcc--cccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 445667788888889999999999999999999988832 233344788999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHhhhcCC------CCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHH
Q 010212 97 RKRVYGMTLMMMVICSLASGLSFG------KEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFA 170 (515)
Q Consensus 97 rr~~l~~~~~~~~i~~~~~~~~~~------~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~ 170 (515)
||++++++.++++++.++++++.- .+....++.++++|+++|++.|...+...++++|++|+++|++++++.+.
T Consensus 84 rr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~ 163 (479)
T PRK10077 84 RRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQF 163 (479)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHH
Confidence 999999999999999888876410 00112256789999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhcCCchhhHHHHhccH
Q 010212 171 MQGFGILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKMPETARYTALVAKNA 250 (515)
Q Consensus 171 ~~~~G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~ 250 (515)
+..+|.+++++++..+...... ...+..+||+.|++.+++.++..+..+++||+|+++..+ ++.
T Consensus 164 ~~~~G~~~~~~~~~~~~~~~~~---------------~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~-~~~ 227 (479)
T PRK10077 164 AIIFGQLVVYFVNYFIARSGDA---------------SWLNTDGWRYMFASEAIPALLFLMLLYFVPETPRYLMSR-GKQ 227 (479)
T ss_pred HHHHHHHHHHHHHHHHhccCcc---------------cccccCChHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHc-CCH
Confidence 9999999998887766421110 012456899999998887777666678899999885332 333
Q ss_pred HHHHHHHHHHHHhhhhH-hhhhHHHh---hcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhHhcc
Q 010212 251 KQAAADMSKVLQVELEA-EQEKVEQE---KGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTAIGW 326 (515)
Q Consensus 251 ~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (515)
+++.+..++..+.+..+ ..++.++. +....+..+. ..............+.....++...++.|.+.++.|.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~ 303 (479)
T PRK10077 228 EQAEGILRKIMGNTLATQALQEIKHSLDHGRKTGGKLLM----FGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKTLGA 303 (479)
T ss_pred HHHHHHHHHHcCChhHHHHHHHHHHHHHHhhhhhhhhcc----hhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHHcCC
Confidence 33332222221111100 00000000 0000000000 0000011111111222222334455667777777666
Q ss_pred cCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHH
Q 010212 327 IPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVV 406 (515)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (515)
+.... ........+..+++.+++++++||+|||+.++.+..+.+++.+++...... .........
T Consensus 304 ~~~~~------------~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~---~~~~~~~~~ 368 (479)
T PRK10077 304 STDIA------------LLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYT---QAPGIVALL 368 (479)
T ss_pred CCchH------------HHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhc---CcccHHHHH
Confidence 54321 124445566777888899999999999999999998888887776543311 111122222
Q ss_pred HHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhh------hccCchHHHHHHHHHHHH
Q 010212 407 LYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLA------DTSGVKKALLILGGANFL 480 (515)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~------~~~g~~~~~~~~~~~~~~ 480 (515)
...+..........+..+.++.|.+|++.|++++|+.+...+++.++++.+.+.+. +..++...|++.++++++
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (479)
T PRK10077 369 SMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVL 448 (479)
T ss_pred HHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHH
Confidence 22223333333345677889999999999999999999999999999987777554 467777888888877777
Q ss_pred HHHHHH-hccccCCCChhhhhhhhhcc
Q 010212 481 GMLFTF-LVPESKGKSLEEMSGEAEEE 506 (515)
Q Consensus 481 ~~~~~~-~~~~~~~~~~~~~~~~~~~~ 506 (515)
+.++.+ +.||+|+++.+|.+++.+++
T Consensus 449 ~~~~~~~~~~e~~~~~~~~~~~~~~~~ 475 (479)
T PRK10077 449 AALFMWKFVPETKGKTLEEMEALWEPE 475 (479)
T ss_pred HHHHHHhccccCCCCCHHHHHHHHhhc
Confidence 777666 67888888887776655443
No 6
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.4e-41 Score=301.90 Aligned_cols=405 Identities=17% Similarity=0.214 Sum_probs=319.1
Q ss_pred HcccchhHHHHHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhh
Q 010212 14 VAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGD 93 (515)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~d 93 (515)
+...+++|+.++...++++...++.+..++...|.+.++. ++|.+|+|.+.+.+++.|.++..+.|.++|
T Consensus 20 ~~~y~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~----------~lsk~~lG~i~s~f~i~YG~sKf~~G~~sD 89 (448)
T COG2271 20 DKTYKRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDG----------GLSKTQLGILGSAFSITYGVSKFVMGVLSD 89 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHHHhhhhcc
Confidence 3456778889999999999999999999999999999999 999999999999999999999999999999
Q ss_pred hhhhhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHH
Q 010212 94 KMGRKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQG 173 (515)
Q Consensus 94 r~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~ 173 (515)
|.+.|+.+.+++++.++.+++++++++ ++.+.+.-+++|..+|...|.+...++.|+|++|||+..++++.+.+
T Consensus 90 r~npr~fm~~gLilsai~nil~Gfs~s------~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shN 163 (448)
T COG2271 90 RSNPRYFMAFGLILSAIVNILFGFSPS------LFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHN 163 (448)
T ss_pred cCCCceeehHHHHHHHHHHHHHhhhhH------HHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhh
Confidence 999999999999999999999999998 89999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH--HHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHH-HHHHHHhcCCchhhHHHHhccH
Q 010212 174 FGILSGGMVA--IIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALL-TYYWRMKMPETARYTALVAKNA 250 (515)
Q Consensus 174 ~G~~~g~~l~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~-~~~~~~~~~e~p~~~~~~~~~~ 250 (515)
+|..+.+++. +.+. .+.+||..|++.++.+++ .++.++..+|+|+...+. ..
T Consensus 164 iGGal~~~~~~la~~~-----------------------~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP--~i 218 (448)
T COG2271 164 IGGALAPLVALLAFFA-----------------------FHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLP--PI 218 (448)
T ss_pred cccchHHHHHHHHHHH-----------------------hccchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCC--CH
Confidence 9999999998 6654 334699999998777765 566677889998752111 11
Q ss_pred HHHHHHHHHHHHhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhH-hcccCC
Q 010212 251 KQAAADMSKVLQVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTA-IGWIPK 329 (515)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 329 (515)
+| .+++..+.+ +++++.+..+.++.+.+..++. +.+|.+.+......+.-++...|.|.|+.+ .+++..
T Consensus 219 e~-------~~~d~~e~~-~~~~~~~~ls~~~i~~~YVL~N--k~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~ 288 (448)
T COG2271 219 EE-------YRGDPLEIY-EEEKENEGLTAWQIFVKYVLKN--KLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLV 288 (448)
T ss_pred HH-------hhcCchhhh-hhhccCCCccHHHHHHHHHHcC--hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHH
Confidence 11 111111111 1111111144566666655544 467888888888888999999999999887 344433
Q ss_pred cccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhh--chhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHH
Q 010212 330 AKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKI--GRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVL 407 (515)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (515)
. +.......-.++++|++++||++||+ |||....+.+.+.....++. .|..++.++.....
T Consensus 289 ~------------a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~-----~w~~~~~~~~l~~~ 351 (448)
T COG2271 289 K------------ANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVL-----YWLAPNGSYLLDAI 351 (448)
T ss_pred H------------HHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHH-----HHcCCCccHHHHHH
Confidence 3 23366677788999999999999996 56655443333322222222 12233344555556
Q ss_pred HHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhh-hHHHHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHH
Q 010212 408 YSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKA-GAIVGAFGFLYLADTSGVKKALLILGGANFLGMLFTF 486 (515)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~-g~~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 486 (515)
.....++...+..-+.-..+.|..|++..|++.|+...+.++ |...+....|++.|.+||...|+++.+.++++.++..
T Consensus 352 ~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~ 431 (448)
T COG2271 352 LLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLL 431 (448)
T ss_pred HHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHH
Confidence 666666666666655567789999999999999999999999 9999999999999999999999999888888887776
No 7
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=7.5e-38 Score=310.42 Aligned_cols=414 Identities=18% Similarity=0.230 Sum_probs=275.2
Q ss_pred HHHHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCch--hHHHH--HHHHHHHHHHHHHHHHhhhhhhhhh
Q 010212 22 FTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPD--NVASA--VNGVALCGTLAGQLFFGWLGDKMGR 97 (515)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~--~~~g~--~~s~~~l~~~i~~~~~G~l~dr~Gr 97 (515)
++++...+++.+++++|...++...|.+.++++. +.++ ...+. +.++.++++.+++++.|+++||+||
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~--------~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Gr 86 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFVAYALGKVFFP--------GADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGR 86 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC--------CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 4566777889999999999999999999999832 1211 11222 2578889999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHhhhcCCCCchhHH--HHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHH
Q 010212 98 KRVYGMTLMMMVICSLASGLSFGKEPKAVM--ITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFG 175 (515)
Q Consensus 98 r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~--~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G 175 (515)
|+++.++.++++++++++++++++.+.+.+ ..++++|+++|++.|+..+...+++.|++|+++|+++.++...+..+|
T Consensus 87 r~~l~~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G 166 (490)
T PRK10642 87 QKILAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAG 166 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHH
Confidence 999999999999999999999993111100 138999999999999999999999999999999999999999988899
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhcCCchhhHHHHhccHHHHHH
Q 010212 176 ILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKMPETARYTALVAKNAKQAAA 255 (515)
Q Consensus 176 ~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~ 255 (515)
..+|+.+...+...... .....+|||+.|++.++++++.+++...+||+|++...+++.+++.
T Consensus 167 ~~lg~~~~~~~~~~~~~---------------~~~~~~gWR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~~~~~~~~-- 229 (490)
T PRK10642 167 FVLGAGVVVLISTIVGE---------------ANFLDWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKLEQGD-- 229 (490)
T ss_pred HHHHHHHHHHHHHhcCH---------------HHhcCccHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHhhhhhc--
Confidence 99888877666533221 0013578999999987776666666678999998732111100000
Q ss_pred HHHHHHHhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhH-hcccCCcccch
Q 010212 256 DMSKVLQVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTA-IGWIPKAKTMN 334 (515)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 334 (515)
.+..+++++.+.++.+++ .++.........+.....++....+.|.++++ .|+++..
T Consensus 230 -------------~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~---- 287 (490)
T PRK10642 230 -------------REGLQDGPKVSFKEIATK-----HWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDH---- 287 (490)
T ss_pred -------------cccccccccCCHHHHHHH-----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH----
Confidence 000000111222333332 11222222233344456677777888888854 4544321
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHH
Q 010212 335 AIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFF 414 (515)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (515)
+........++.+++.++.|+++||+|||+.+..+.++..++...+..... ............+....
T Consensus 288 --------~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~ 355 (490)
T PRK10642 288 --------GVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILIN----SNVIGLIFAGLLMLAVI 355 (490)
T ss_pred --------HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHh----CCCHHHHHHHHHHHHHH
Confidence 222445566777788889999999999999887776543333222111110 01111111111111111
Q ss_pred hhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccC-chHHHHHHHHHHHHHHHHHHhccccCC
Q 010212 415 SNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSG-VKKALLILGGANFLGMLFTFLVPESKG 493 (515)
Q Consensus 415 ~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (515)
.+. ..+....+..|.+|++.|+++.|+.+.....++.++|.+.+++.+..+ +...+.+..+.++++.+..+++||+++
T Consensus 356 ~~~-~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~pes~~ 434 (490)
T PRK10642 356 LNC-FTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVTMKETAN 434 (490)
T ss_pred HHH-HHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccC
Confidence 111 123344666789999999999998777778888999999999987654 455555556666666666667788765
Q ss_pred CC
Q 010212 494 KS 495 (515)
Q Consensus 494 ~~ 495 (515)
+.
T Consensus 435 ~~ 436 (490)
T PRK10642 435 RP 436 (490)
T ss_pred CC
Confidence 43
No 8
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=5e-38 Score=313.79 Aligned_cols=436 Identities=25% Similarity=0.361 Sum_probs=302.5
Q ss_pred hhHHHHHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhh
Q 010212 19 WYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRK 98 (515)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr 98 (515)
++.+....++.++.+...++...+++..+.+..++..+ ...+.+.+..+.+++.+++.++..++++++|+++||+|||
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr 101 (481)
T TIGR00879 24 WKVALLSLIAAIGGLMFGYDTGVIGGALALPAFEFKFT--SANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRK 101 (481)
T ss_pred HHHHHHHHHHHHHHHhcccccchhhhhhhcHHHHHhcC--CcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhH
Confidence 33344445555667778889999999999998888221 1122346689999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHH
Q 010212 99 RVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILS 178 (515)
Q Consensus 99 ~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~ 178 (515)
++++++.+++.++.+++.+..+.. .++.+++.|+++|++.+...+...+++.|++|+++|++++++.+.+..+|..+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~ 178 (481)
T TIGR00879 102 KSLLIIALLFVIGAILMGLAAFAL---SVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILV 178 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccc---chHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHH
Confidence 999999999999999986654421 15689999999999999999999999999999999999999999999999999
Q ss_pred HHHHH---HHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhcCCchhhHHHHhccHHHHHH
Q 010212 179 GGMVA---IIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKMPETARYTALVAKNAKQAAA 255 (515)
Q Consensus 179 g~~l~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~ 255 (515)
++.++ ... ....+||+.|++.++..++.++..+++||+|++...+ ++.++..+
T Consensus 179 ~~~~~~~~~~~-----------------------~~~~~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~ 234 (481)
T TIGR00879 179 AYGFGSGKVSL-----------------------NNTLGWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGK-GRVEEARK 234 (481)
T ss_pred HHHHHHHhhcC-----------------------CCCccHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHc-CChHHHHH
Confidence 99998 222 2456799999997777777777778899998764222 22222222
Q ss_pred HHHHHHHhhhhH-h----------hhhHHHhh-cCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhH
Q 010212 256 DMSKVLQVELEA-E----------QEKVEQEK-GKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTA 323 (515)
Q Consensus 256 ~~~~~~~~~~~~-~----------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (515)
...+..+.+.++ + ..+.+.+. +...++.++ ...+...+.++...+.++...........+.|.+.++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (481)
T TIGR00879 235 SLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSLFS-STRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFEN 313 (481)
T ss_pred HHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHHHHh-cCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHH
Confidence 222111100000 0 00000000 111111111 1100112233333333433333344456677777777
Q ss_pred hcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCC---Cc
Q 010212 324 IGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLP---DH 400 (515)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 400 (515)
.|++... +........++.+++.++.+++.||++||+.+..+..+..++++++.......... ..
T Consensus 314 ~g~~~~~------------~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (481)
T TIGR00879 314 AGVSTDH------------AFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSS 381 (481)
T ss_pred cCCCchH------------HHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccch
Confidence 7766532 22255666677788899999999999999999888887777776665322111111 01
Q ss_pred hHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCchHHHHHHHHHHHH
Q 010212 401 RIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSGVKKALLILGGANFL 480 (515)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~~~~~~~~~~~~~ 480 (515)
.........+...+...+..+....+..|.+|++.|++++|+.+...+++++++|.+.+.+.+..++...|++.++++++
T Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~ 461 (481)
T TIGR00879 382 GNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVL 461 (481)
T ss_pred hHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHH
Confidence 23333344444445555556777788899999999999999999999999999999999999988999999988888888
Q ss_pred HHHHHH-hccccCCCCh
Q 010212 481 GMLFTF-LVPESKGKSL 496 (515)
Q Consensus 481 ~~~~~~-~~~~~~~~~~ 496 (515)
+.++.+ +.+|+|+++.
T Consensus 462 ~~i~~~~~~~~~~~~~~ 478 (481)
T TIGR00879 462 GLIFVYFFLPETKGRTL 478 (481)
T ss_pred HHHHHheecccCCCCCh
Confidence 877776 5677665543
No 9
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=3.9e-38 Score=305.37 Aligned_cols=400 Identities=13% Similarity=0.134 Sum_probs=279.6
Q ss_pred hhHHHHHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhh
Q 010212 19 WYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRK 98 (515)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr 98 (515)
+.+|+.+..++++++.+++|+..++...|.+.+|+ +++.++.|++.+++.+++++++++.|+++||+|||
T Consensus 4 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~----------~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r 73 (412)
T TIGR02332 4 KLFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDL----------GLSATMFGLAATLFYAAYVICGIPSNIMLAIIGAR 73 (412)
T ss_pred eehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhc----------CCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChH
Confidence 45678888899999999999999999999999999 99999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHH
Q 010212 99 RVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILS 178 (515)
Q Consensus 99 ~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~ 178 (515)
+++..+.+++++++++++++++ ++.+++.|+++|++.+...+....++.|++|+++|++++++++.+.++|.++
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~ 147 (412)
T TIGR02332 74 RWIAGIMVLWGIASTATMFATG------PESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMAL 147 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC------HHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999 8999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHH-HHHHHhcCCchhhHHHHhccHHHHHHHH
Q 010212 179 GGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLT-YYWRMKMPETARYTALVAKNAKQAAADM 257 (515)
Q Consensus 179 g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~-~~~~~~~~e~p~~~~~~~~~~~~~~~~~ 257 (515)
++++++.+....+ ..+..|||+.|++.++..++. .+..+++||+|+.. +.-.+++ .+..
T Consensus 148 ~~~~~~~l~~~~~-----------------~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~--~~l~~~~-~~~~ 207 (412)
T TIGR02332 148 GLILSGYILALDG-----------------LMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKA--KWLDEED-KKAL 207 (412)
T ss_pred HHHHHHHHHhCCC-----------------CCCccchhHHHHHHHHHHHHHHHHHhhccCCCcccC--CCCCHHH-HHHH
Confidence 9999988753211 013467999999977776654 44556789988531 0000111 1111
Q ss_pred HHHHHhhh-hHhhhhHH-HhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhHhc--ccCCcccc
Q 010212 258 SKVLQVEL-EAEQEKVE-QEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTAIG--WIPKAKTM 333 (515)
Q Consensus 258 ~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 333 (515)
.+..+.+. +.+.++.+ ++++...++.++... + +.++.....+++....++....+.|.++++.+ .++.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~---- 279 (412)
T TIGR02332 208 KEMIDNDQLTLEQPEGAFAHAAMPQRSMLREIF-T---PAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNI---- 279 (412)
T ss_pred HHHHHhccccccccccccccccccHHHHHHHhc-C---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHH----
Confidence 11111000 00000000 000000011112111 1 23455555566666677788889999988742 2221
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHH-HHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHH
Q 010212 334 NAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQ-LMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTF 412 (515)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (515)
.+........++.+++.++.++++||+++|+.. .....+..++. ++.... ........... ..
T Consensus 280 --------~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~-~~~~~~------~~~~~~~~~~~-~~ 343 (412)
T TIGR02332 280 --------MIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGW-LLASAT------DHNLIQLLGII-MA 343 (412)
T ss_pred --------HhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHH-HHHHhc------CCHHHHHHHHH-HH
Confidence 122256667777888999999999999977643 33333333332 221111 11111111111 11
Q ss_pred HHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccC-chHHHHHHHHHH
Q 010212 413 FFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSG-VKKALLILGGAN 478 (515)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g-~~~~~~~~~~~~ 478 (515)
........+..+....|.+|++.|++++|+.+...++|++++|.+.|.+.|..| |+.++.+++++.
T Consensus 344 ~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~~ 410 (412)
T TIGR02332 344 SMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWFVAALL 410 (412)
T ss_pred HHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHHHH
Confidence 111122223444556788999999999999999999999999999999999875 888887666543
No 10
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=3.9e-38 Score=310.95 Aligned_cols=413 Identities=13% Similarity=0.102 Sum_probs=285.9
Q ss_pred HHHHHcccchhHHHHHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHh
Q 010212 10 NALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFG 89 (515)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G 89 (515)
+++.+....+..+.++..++++++..+.++..+++..|.+.+|+ +++.++.|++.+.+.+++.+++++.|
T Consensus 16 ~~~~~~~~~~~~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~----------~~s~~~~g~~~s~~~~~~~~~~~~~G 85 (467)
T PRK09556 16 LEVQRKMWFKPFMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTY----------GLSTTELGMIGLGFSITYGVGKTLVG 85 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHhhhh
Confidence 34444455566777888899999999999999999999999999 99999999999999999999999999
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHhhh-----cCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhH
Q 010212 90 WLGDKMGRKRVYGMTLMMMVICSLASGL-----SFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAF 164 (515)
Q Consensus 90 ~l~dr~Grr~~l~~~~~~~~i~~~~~~~-----~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~ 164 (515)
+++||+|||+++.++.++++++.++.++ +++ ++.+++.|+++|++.+...+...++++||+|+++|+++
T Consensus 86 ~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a 159 (467)
T PRK09556 86 YYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVS------LGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRF 159 (467)
T ss_pred hHhhccCccchHHHHHHHHHHHHHHHHHHHhcccch------HHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeee
Confidence 9999999999999998888887776665 466 89999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHH-HHHHHhcCCchhhH
Q 010212 165 IAAVFAMQGFGILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLT-YYWRMKMPETARYT 243 (515)
Q Consensus 165 ~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~-~~~~~~~~e~p~~~ 243 (515)
++++..+.++|.++++++...+..... ..+||..|.+.++..++. ++.+++.+|+|+..
T Consensus 160 ~gi~~~~~~lG~~l~~~i~~~~~~~~~--------------------~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~ 219 (467)
T PRK09556 160 LGFWNISHNLGGAGAGGVALWGANYFF--------------------DGHVIGMFIFPSIIALIIGFIGLRYGSDSPEEL 219 (467)
T ss_pred EEeeecccchhhhHHHHHHHHHHHhhc--------------------cCcchhHHHHHHHHHHHHHHHHHHhCCCChhhc
Confidence 999999999999999988876643211 124999888866666553 44455567776531
Q ss_pred HHHhccHHHHHHHHHHHHHhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhH
Q 010212 244 ALVAKNAKQAAADMSKVLQVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTA 323 (515)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (515)
...+.++. .. .....+.+ .+++++.+..+.++....+. +.++...+..++....++....+.|.++++
T Consensus 220 --~~~~~~~~---~~----~~~~~~~~-~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~ 287 (467)
T PRK09556 220 --GWGKAEEI---FG----EPISEEDK-ETESTDMTKWQIFVEYVLKN--PVIWLLCFANIFLYIVRIGIDNWSPVYAFQ 287 (467)
T ss_pred --CCCChhhc---cc----Cccchhhh-ccccccCcHHHHHHHHHHcC--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111110 00 00000000 00000111112122211111 234555555555556667777888988765
Q ss_pred -hcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchH
Q 010212 324 -IGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRI 402 (515)
Q Consensus 324 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (515)
.|+++.+. ........++.+++.++.|+++||++||+.......+..++..++.... ..+..
T Consensus 288 ~~g~s~~~a------------~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 350 (467)
T PRK09556 288 ELGFSKEDA------------INTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQH-----ATSEY 350 (467)
T ss_pred ccCCCHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHh-----cCcHH
Confidence 56554331 2245556667889999999999999998876655444333322222211 11122
Q ss_pred HHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhh-hHHHHHHHHHHhhh------------ccCchH
Q 010212 403 GFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKA-GAIVGAFGFLYLAD------------TSGVKK 469 (515)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~-g~~i~~~~~~~l~~------------~~g~~~ 469 (515)
...+..+..+....+........+.|.+|++.+|++.|+.+...++ |.+++|.+.|.+.| ..+|+.
T Consensus 351 -~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~ 429 (467)
T PRK09556 351 -MYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAG 429 (467)
T ss_pred -HHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHH
Confidence 2222222222222222222235567999999999999999999997 77999999999999 578999
Q ss_pred HHHHHHHHHHHHHHHHHhc
Q 010212 470 ALLILGGANFLGMLFTFLV 488 (515)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~ 488 (515)
.|.+..++.+++.+..+++
T Consensus 430 ~f~~~~~~~~~~~~~~~~~ 448 (467)
T PRK09556 430 TFAALDIAAIGCICLMAIV 448 (467)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9998888888887766644
No 11
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=1.9e-36 Score=296.95 Aligned_cols=379 Identities=21% Similarity=0.258 Sum_probs=268.4
Q ss_pred chhHHHHHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhh
Q 010212 18 QWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGR 97 (515)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Gr 97 (515)
++++++.+..+.++++.++++.....+..|.+.+++ |+++.+.+++.+.+.++..+++++.|+++||+||
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~----------~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~ 82 (426)
T PRK12307 13 TRPQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADL----------GLTDMEGAFLATAAFIGRPFGGALFGLLADKFGR 82 (426)
T ss_pred CHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHh----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 356677788888999999999999999999999999 9999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHH
Q 010212 98 KRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGIL 177 (515)
Q Consensus 98 r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~ 177 (515)
|+++..+.++.+++.++++++++ ++.++++|+++|++.+...+....++.|++|+++|+++.++...+..+|.+
T Consensus 83 r~~l~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~ 156 (426)
T PRK12307 83 KPLMMWSIVAYSVGTGLSGLASG------VIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNI 156 (426)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhH------HHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHH
Confidence 99999999999999999999988 899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhcCCchhhHHHHhccHHHHHHHH
Q 010212 178 SGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKMPETARYTALVAKNAKQAAADM 257 (515)
Q Consensus 178 ~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~ 257 (515)
+++.+.+.+. +..+||+.|++..+..++........||++++. +++.+++
T Consensus 157 ~~~~l~~~l~-----------------------~~~~w~~~f~i~~~~~~~~~~~~~~~p~~~~~~--~~~~~~~----- 206 (426)
T PRK12307 157 IAAYFMPSFA-----------------------EAYGWRAAFFVGLLPVLLVIYIRARAPESKEWE--EAKLSGK----- 206 (426)
T ss_pred HHHHHHHHHc-----------------------ccCCHHHHHHHHHHHHHHHHHHHHHCCCChHHH--Hhhhhcc-----
Confidence 9998887774 445699999986554444333333456665431 1000000
Q ss_pred HHHHHhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccchhHH
Q 010212 258 SKVLQVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIE 337 (515)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (515)
+++.++..+..+.+.++.++++.. +.........+......+....+.|.++++.|+++..
T Consensus 207 --------~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~------- 267 (426)
T PRK12307 207 --------GKHSQSAWSVFSLSMKGLFNRAQF----PLTLCVFIVLFSIFGANWPIFGLLPTYLAGEGFDTGV------- 267 (426)
T ss_pred --------ccccccchhhhhHHHHHHHhhchH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH-------
Confidence 000000000000112223332222 1112222222222223334455677777766554332
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhc
Q 010212 338 EVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNF 417 (515)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (515)
.........++.+++.++.+++.||++||+....+.++..+..+.+.... ...................
T Consensus 268 -----~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 336 (426)
T PRK12307 268 -----VSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIP------QDNYLLLGACLFGLMATNV 336 (426)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHc------cccHHHHHHHHHHHHHhcc
Confidence 11244556677888999999999999999988877766655544333221 1112212222222222223
Q ss_pred CccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCchHHHH
Q 010212 418 GPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSGVKKALL 472 (515)
Q Consensus 418 ~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~~~~~ 472 (515)
+..+....++.|.+|++.|++++|+.+...++++.++|.+.|.+.+..|+.....
T Consensus 337 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~~~~ 391 (426)
T PRK12307 337 GVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAALT 391 (426)
T ss_pred cHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHHHHH
Confidence 3334555677899999999999999999999999999999999999888765433
No 12
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=2.8e-36 Score=293.70 Aligned_cols=385 Identities=18% Similarity=0.235 Sum_probs=284.1
Q ss_pred cchhHHHHHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhh
Q 010212 17 TQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMG 96 (515)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~G 96 (515)
..+++|.++.++++..+.++++....+...|.+.+++ +.++++.+++.+.+.++..+++++.|+++||+|
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g 78 (406)
T PRK11551 9 SSSRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEF----------GLDVAQMGWAFSAGILGLLPGALLGGRLADRIG 78 (406)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3457888889999999999999999999999999999 999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHH
Q 010212 97 RKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGI 176 (515)
Q Consensus 97 rr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~ 176 (515)
||+++..+.++.+++.++++++++ ++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|.
T Consensus 79 ~r~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 152 (406)
T PRK11551 79 RKRILIVSVALFGLFSLATAQAWD------FPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGG 152 (406)
T ss_pred CchhHHHHHHHHHHHHHHHHHhcc------HHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999988 89999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHH-HHHHHhcCCchhhHHHHhccHHHHHH
Q 010212 177 LSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLT-YYWRMKMPETARYTALVAKNAKQAAA 255 (515)
Q Consensus 177 ~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~-~~~~~~~~e~p~~~~~~~~~~~~~~~ 255 (515)
.+++.++..+. +..+||+.|++.++..++. .+...++||+|++. .++++++..+
T Consensus 153 ~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~ 207 (406)
T PRK11551 153 ALASVIGVLAA-----------------------GDAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFA--QAAGAGKQRA 207 (406)
T ss_pred HHHHHHHHHHc-----------------------cccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHH--hccCcchhhh
Confidence 99999987763 4566999999866655443 34456689987652 1111000000
Q ss_pred HHHHHHHhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccchh
Q 010212 256 DMSKVLQVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNA 335 (515)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (515)
. ..+..++.+..++ ........+......+....+.|.++++.|+++...+.
T Consensus 208 ~----------------------~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~-- 259 (406)
T PRK11551 208 P----------------------VLRALFGEGRATA----TLLLWISYFFTLIVLYFLLNWLPSLLVGQGLSRSQAGL-- 259 (406)
T ss_pred h----------------------hHHHHhhhhhhhH----HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhhhhH--
Confidence 0 0000111111111 11122222333344555666778888877766554332
Q ss_pred HHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHh
Q 010212 336 IEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFS 415 (515)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (515)
......++.+++.++.|++.||++||+.+..+.....+++..+.... +.+ ...+..+..++.
T Consensus 260 ----------~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~-~~~~~~~~~g~~ 321 (406)
T PRK11551 260 ----------VQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAP-------SFA-GMLLAGFAAGLF 321 (406)
T ss_pred ----------HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcC-------cHH-HHHHHHHHHHHH
Confidence 55566678888999999999999999988776655555544443221 122 222233333333
Q ss_pred hcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccC-chHHHHHHHHHHHHHHHHHHhc
Q 010212 416 NFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSG-VKKALLILGGANFLGMLFTFLV 488 (515)
Q Consensus 416 ~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~ 488 (515)
..+..+..+++..|.+|++.|+++.|+.+....++..++|.+.|.+.+..+ +...+.....+.+++.++.+.+
T Consensus 322 ~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 322 VVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLL 395 (406)
T ss_pred HHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 334456677888999999999999999999999999999999999998654 4455555555555555555533
No 13
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=6.4e-37 Score=299.41 Aligned_cols=407 Identities=12% Similarity=0.107 Sum_probs=281.9
Q ss_pred cchhHHHHHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhh
Q 010212 17 TQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMG 96 (515)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~G 96 (515)
.+++++.+.....++++...+++..++...|.+.+++ |.+.++.|++.+.+.+++.+++++.|+++||+|
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g 86 (434)
T PRK11663 17 YRYWRRHILITMYLGYALFYFTRKSFNAAMPEMLADL----------GLSRSDIGLLATLFYITYGVSKFVSGIVSDRSN 86 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcC
Confidence 3455667777788888888899999999999999999 999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHH
Q 010212 97 RKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGI 176 (515)
Q Consensus 97 rr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~ 176 (515)
||+++.++.++.+++.++++++++ ++.+++.|++.|++.|...+...+++.|++|+++|++++++.+.+.++|.
T Consensus 87 ~r~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~ 160 (434)
T PRK11663 87 ARYFMGIGLIATGIINILFGFSSS------LWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGG 160 (434)
T ss_pred CchhHHHHHHHHHHHHHHHHHHhH------HHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999988 89999999999999999899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHH-HHHHHHhcCCchhhHHHHhccHHHHHH
Q 010212 177 LSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALL-TYYWRMKMPETARYTALVAKNAKQAAA 255 (515)
Q Consensus 177 ~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~-~~~~~~~~~e~p~~~~~~~~~~~~~~~ 255 (515)
.+++.+.+.+. +..|||+.|++.++..++ .++..+++||+|++....+.++.+. +
T Consensus 161 ~~~~~~~~~l~-----------------------~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-~ 216 (434)
T PRK11663 161 ALIPLVVGAIA-----------------------LHYGWRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRH-D 216 (434)
T ss_pred HHHHHHHHHHH-----------------------HcccHHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccc-c
Confidence 99999999885 345699999987766554 3445566788875411000000000 0
Q ss_pred HHHHHHHhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhH-hcccCCcccch
Q 010212 256 DMSKVLQVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTA-IGWIPKAKTMN 334 (515)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 334 (515)
. ++.++..++++.+.++.++....+. +.++...+..+.....++....+.|.++++ .|+++...
T Consensus 217 ~----------~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a--- 281 (434)
T PRK11663 217 A----------LELAQQQEGAGLSRKEILTKYVLLN--PYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTA--- 281 (434)
T ss_pred c----------cccchhccccCCChhhhHHHHHhcC--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHH---
Confidence 0 0000000001112222222211111 223444444444445556666788888743 56655432
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhh--chhhHH-HHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHH
Q 010212 335 AIEEVYKIARAQTLIALCSTVPGYWFTVALIDKI--GRFAIQ-LMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLT 411 (515)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~--g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (515)
........++.+++.++.|+++||+ ++|+.. ........+..+.+.... . ..........+.
T Consensus 282 ---------~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~~ 346 (434)
T PRK11663 282 ---------NSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMP----F--ASYVMQAACFFT 346 (434)
T ss_pred ---------HHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcc----c--ccHHHHHHHHHH
Confidence 2255566677889999999999998 333332 221111121221111111 1 111122122222
Q ss_pred HHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHH-hccc
Q 010212 412 FFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSGVKKALLILGGANFLGMLFTF-LVPE 490 (515)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~ 490 (515)
.++...+..........|.+|++.|++++|+.++..++|.+++|.+.|.+.|..||+..|.+.+++.+++.+..+ ..++
T Consensus 347 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~ 426 (434)
T PRK11663 347 IGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLLPFLNA 426 (434)
T ss_pred HHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 222222222223345689999999999999999999999999999999999999999999999888888776665 4444
Q ss_pred cCC
Q 010212 491 SKG 493 (515)
Q Consensus 491 ~~~ 493 (515)
+++
T Consensus 427 ~~~ 429 (434)
T PRK11663 427 QAP 429 (434)
T ss_pred hch
Confidence 433
No 14
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=3.1e-36 Score=294.63 Aligned_cols=400 Identities=20% Similarity=0.238 Sum_probs=259.5
Q ss_pred cchhHHHHHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHH---HHHHHHHHHHHHHHHHhhhhh
Q 010212 17 TQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASA---VNGVALCGTLAGQLFFGWLGD 93 (515)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~---~~s~~~l~~~i~~~~~G~l~d 93 (515)
.++++++.+..++++.+.+++|+..++...|.+.+++++. +.+..+.+. +.+..+++..++++++|+++|
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~D 88 (432)
T PRK10406 16 DTRRRIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPS-------GNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIAD 88 (432)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-------CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445666777788899999999999999999999998321 233444333 444555555699999999999
Q ss_pred hhhhhhHHHHHHHHHHHHHHHhhhcCCCCch--hHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHH
Q 010212 94 KMGRKRVYGMTLMMMVICSLASGLSFGKEPK--AVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAM 171 (515)
Q Consensus 94 r~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~ 171 (515)
|+|||+++..+.++++++++++++++++... ..+..++++|+++|++.|+..+...+++.|++|+++|+++.++.+.+
T Consensus 89 r~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~ 168 (432)
T PRK10406 89 KHGRKKSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVT 168 (432)
T ss_pred hcCcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHH
Confidence 9999999999999999999999999884210 11246999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhcCCchhhHHHHhccHH
Q 010212 172 QGFGILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKMPETARYTALVAKNAK 251 (515)
Q Consensus 172 ~~~G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~ 251 (515)
...|.++++++...+.....+ .....+|||++|++.++++++.+.+...+||+|++. .++.
T Consensus 169 ~~~G~~~~~~~~~~~~~~~~~---------------~~~~~~gWr~~F~i~~~~~ll~~~~~~~~~e~~~~~--~~~~-- 229 (432)
T PRK10406 169 LIGGQLLALLVVVVLQQTLED---------------AELREWGWRIPFALGAVLAVVALWLRRQLDETSQQE--TRAL-- 229 (432)
T ss_pred HHHHHHHHHHHHHHHHHhCCH---------------HHHhccchHHHHHHHHHHHHHHHHHHhcCCCCchHH--Hhhh--
Confidence 889988888877666433211 001357899999998888777666666678876531 0000
Q ss_pred HHHHHHHHHHHhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhH-hcccCCc
Q 010212 252 QAAADMSKVLQVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTA-IGWIPKA 330 (515)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 330 (515)
++..+.++.++++ +.........+.....++....+.|.++++ .|++..+
T Consensus 230 -----------------------~~~~~~~~l~~~~------~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~ 280 (432)
T PRK10406 230 -----------------------KEAGSLKGLWRNR------RAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANV 280 (432)
T ss_pred -----------------------cccccHHHHHhhH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH
Confidence 0011222333221 111112222222345566777788888765 4544322
Q ss_pred ccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHH
Q 010212 331 KTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSL 410 (515)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (515)
.+. ......+...++.++.|+++||++||+.+.....+..+....+.... . ..........+..+
T Consensus 281 -----------~~~-~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~ 345 (432)
T PRK10406 281 -----------ASG-IMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSAL--Q-NVSSPYAAFGLVMC 345 (432)
T ss_pred -----------HHH-HHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHH--H-cCCcHHHHHHHHHH
Confidence 111 33333444556677889999999999987766554433332221111 0 00111211111111
Q ss_pred HHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhh-hHHHHHHHHHHhhhccC-chHHHHHHHHHHHHHHHHHHhc
Q 010212 411 TFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKA-GAIVGAFGFLYLADTSG-VKKALLILGGANFLGMLFTFLV 488 (515)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~-g~~i~~~~~~~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~ 488 (515)
....... ..+..+.+.+|.+|++.|++++|+.+..++. .+...|.+.+.+ +..| +...+++.++..+++.+..+++
T Consensus 346 ~~~~~~~-~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g~~~~~~~~~~~~~~i~~~~~~~l 423 (432)
T PRK10406 346 ALLIVSF-YTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL-KSIGMETAFFWYVTLMAVVAFLVSLML 423 (432)
T ss_pred HHHHHHH-HHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HHhCCCcHHHHHHHHHHHHHHHHHHHh
Confidence 1111111 1234557789999999999999999988775 344577877755 4455 5555665666666666655554
No 15
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.6e-36 Score=275.40 Aligned_cols=379 Identities=14% Similarity=0.153 Sum_probs=287.8
Q ss_pred cchhHHHHHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhh
Q 010212 17 TQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMG 96 (515)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~G 96 (515)
.++..+..++.+.++.|..+.+...+..++|++.+|+ +.|..+.|+..+.|.++..+++++...+.||+.
T Consensus 7 ~~~~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl----------~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~ 76 (394)
T COG2814 7 ARKPMWLALLALALAAFAIGTTEFVPVGLLPPIAADL----------GVSEGAAGQLITAYALGVALGAPLLALLTGRLE 76 (394)
T ss_pred ccccchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 3445567788888999999999999999999999999 999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHH
Q 010212 97 RKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGI 176 (515)
Q Consensus 97 rr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~ 176 (515)
||++++..+.++.++++++++++| |+.++++|++.|++.|.+++...++..+..|+++|++++++...+.+++.
T Consensus 77 Rr~lLl~~l~lFi~~n~l~alAp~------f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~ 150 (394)
T COG2814 77 RRRLLLGLLALFIVSNLLSALAPS------FAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLAT 150 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcc------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHH
Confidence 999999999999999999999999 89999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHH-HHHhcCCchhhHHHHhccHHHHHH
Q 010212 177 LSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYY-WRMKMPETARYTALVAKNAKQAAA 255 (515)
Q Consensus 177 ~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~-~~~~~~e~p~~~~~~~~~~~~~~~ 255 (515)
++|.+++.++.+. +|||..|++.+..+++.++ .+..+| |+. ..++...+.
T Consensus 151 v~GvPLGt~ig~~-----------------------~GWR~~F~~ia~l~ll~~~~~~~~lP--~~~--~~~~~~~~~-- 201 (394)
T COG2814 151 VLGVPLGTFLGQL-----------------------FGWRATFLAIAVLALLALLLLWKLLP--PSE--ISGSLPGPL-- 201 (394)
T ss_pred HHhccHHHHHHHH-----------------------hhHHHHHHHHHHHHHHHHHHHHHhCC--Ccc--CCCCCCcch--
Confidence 9999999999654 5599999998888777544 556678 221 000000000
Q ss_pred HHHHHHHhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhH-hcccCCcccch
Q 010212 256 DMSKVLQVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTA-IGWIPKAKTMN 334 (515)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 334 (515)
.+..+.++++. ++......++.....|....|...++++ .|+++...+
T Consensus 202 ----------------------~~~~~~l~~p~-------v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs-- 250 (394)
T COG2814 202 ----------------------RTLLRLLRRPG-------VLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVS-- 250 (394)
T ss_pred ----------------------hHHHHHhcCch-------HHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHH--
Confidence 00111112221 2222333333333445555555555544 555554422
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHH
Q 010212 335 AIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFF 414 (515)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (515)
+....++++.++|..++|++.|| +.|+.+.....+..+.+..+.+.. .+...........++
T Consensus 251 ----------~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~-------~~~~~~~~~~~~wg~ 312 (394)
T COG2814 251 ----------LVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTG-------ASPALALALLFLWGF 312 (394)
T ss_pred ----------HHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhc-------chHHHHHHHHHHHHH
Confidence 27788899999999999999999 888888888777777777765544 122222222222222
Q ss_pred hhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHHhccc
Q 010212 415 SNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSGVKKALLILGGANFLGMLFTFLVPE 490 (515)
Q Consensus 415 ~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 490 (515)
..............+.. ++.++.+.+++....|+|..+|..+.|.+.|+.|+....++.+.+.+++.++.+...+
T Consensus 313 a~~~~~~~~~~~~a~~~-p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~~ 387 (394)
T COG2814 313 AFSPALQGLQTRLARLA-PDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSAR 387 (394)
T ss_pred HhhhhhhHHHHHhcccC-CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 22222222233344433 5889999999999999999999999999999999999999999988888887775433
No 16
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=7.7e-37 Score=306.03 Aligned_cols=382 Identities=21% Similarity=0.351 Sum_probs=278.5
Q ss_pred HHHhhhhhhhhccCCCCCCCCCc---hhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhcCC
Q 010212 44 LVTKLLGRIYYYKEGSDSPGTLP---DNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLSFG 120 (515)
Q Consensus 44 ~~~~~i~~~~~~~~~~~~~~~~s---~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~ 120 (515)
+..|.+.+|+ +++ ..+.+++.+++.++..+++++.|+++||+|||++++++.++.+++.++++++++
T Consensus 110 ~~~~~i~~e~----------~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~ 179 (505)
T TIGR00898 110 TFSSTIVTEW----------DLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPN 179 (505)
T ss_pred cccccEEEEe----------cceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHccc
Confidence 5667888888 888 899999999999999999999999999999999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccC
Q 010212 121 KEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFPAPIYS 200 (515)
Q Consensus 121 ~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~~~~~~ 200 (515)
++.+++.|++.|++.+...+....++.|++|+++|+++.++...+..+|.++++.++..+.
T Consensus 180 ------~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~------------- 240 (505)
T TIGR00898 180 ------YTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIP------------- 240 (505)
T ss_pred ------HHHHHHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhh-------------
Confidence 8999999999999999999999999999999999999999999999999999998887662
Q ss_pred CCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhcCCchhhHHHHhccHHHHHHHHHHHHHhhhh---Hhh--h--hHH
Q 010212 201 ANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVELE---AEQ--E--KVE 273 (515)
Q Consensus 201 ~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~--~~~ 273 (515)
+||+.|++.+++.++..+..+++||+|+|+. .+++.+++.+.+++..+.+.. .+. . +.+
T Consensus 241 -------------~wr~~~~~~~i~~~~~~~~~~~~~esp~~l~-~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~ 306 (505)
T TIGR00898 241 -------------DWRWLQLAVSLPTFLFFLLSWFVPESPRWLI-SQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKD 306 (505)
T ss_pred -------------HHHHHHHHHHHHHHHHHHHHHhcCCChHHHH-HCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhh
Confidence 2999999988888777777788999999963 334445555555444332211 000 0 000
Q ss_pred Hh---hcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccchhHHHHHHHHHHHHHHH
Q 010212 274 QE---KGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKIARAQTLIA 350 (515)
Q Consensus 274 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (515)
.+ ++...+++++++..+. ..+...+.++.....++....+.+.+ +.+. .......
T Consensus 307 ~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~---------------~~~~~~~ 364 (505)
T TIGR00898 307 LSSSKKQYSFLDLFRTPNLRK---TTLCLMMLWFTTAFSYYGLVLDLGNL----GGNI---------------YLDLFIS 364 (505)
T ss_pred hhhccCCCcHHHHhCChHHHH---HHHHHHHHHHHHHHHHHHHhcccccc----CCCh---------------HHHHHHH
Confidence 00 1123344444443332 23333344444444555444333321 1110 1133444
Q ss_pred HhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCcccccccccccc
Q 010212 351 LCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEI 430 (515)
Q Consensus 351 ~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (515)
.+..+++.++.+++.||+|||+.+..+.++.+++++++..... ...+...... +...+......+..+.+..|.
T Consensus 365 ~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~e~ 438 (505)
T TIGR00898 365 GLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPV-----DLYFLRTALA-VLGKFGITSAFQMVYLYTAEL 438 (505)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCC-----CchHHHHHHH-HHHHHHHHHHHHHHHHHhccc
Confidence 5667788889999999999999999888887777766654321 1112222222 222222223345677888999
Q ss_pred CchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHHhccccCCCChhh
Q 010212 431 FPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSGVKKALLILGGANFLGMLFTFLVPESKGKSLEE 498 (515)
Q Consensus 431 ~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (515)
+|++.|++++|+.++...+|++++|.+.+ + +..++...+.+++++.+++.++.+++||+++++.+|
T Consensus 439 ~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~lpet~~~~l~~ 504 (505)
T TIGR00898 439 YPTVVRNLGVGVCSTMARVGSIISPFLVY-L-GEKWLFLPLVLFGGLALLAGILTLFLPETKGVPLPE 504 (505)
T ss_pred ccHHHHhhhHhHHHHHHHHHHHHHhHHHH-H-HHHHHhhHHHHHHHHHHHHHHHHHcCcCCCCCCCCC
Confidence 99999999999999999999999999999 4 445667788888888888888778889988876543
No 17
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=7.7e-36 Score=291.14 Aligned_cols=394 Identities=18% Similarity=0.208 Sum_probs=277.7
Q ss_pred ccchhHHHHHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 010212 16 KTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKM 95 (515)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~ 95 (515)
+.++++|+.+..++++++.++++....++..|.+.+++ +.+..+.+++.+.+.++..+++++.|+++||+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----------~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~ 74 (405)
T TIGR00891 5 HLTRAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEF----------GLTTVDAASLISAALISRWFGALMFGLWGDRY 74 (405)
T ss_pred cCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 35678889999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHH
Q 010212 96 GRKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFG 175 (515)
Q Consensus 96 Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G 175 (515)
|||++++.+.++.+++.++++++++ ++.+++.|++.|++.+...+...+++.|++|+++|+++.++.+.+..+|
T Consensus 75 g~r~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g 148 (405)
T TIGR00891 75 GRRLPMVTSIVLFSAGTLACGFAPG------YITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVG 148 (405)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhcc------HHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHH
Confidence 9999999999999999999999988 8999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhcCCchhhHHHHhccHHHHHH
Q 010212 176 ILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKMPETARYTALVAKNAKQAAA 255 (515)
Q Consensus 176 ~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~ 255 (515)
..+++.+++.+.+..+ .+||+.|++.++..++.++....+||++++...+ +++++..+
T Consensus 149 ~~~~~~l~~~l~~~~~---------------------~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 206 (405)
T TIGR00891 149 AVVAAQVYSLVVPVWG---------------------DGWRALFFISILPIIFALWLRKNIPEAEDWKEKH-AGKALVRT 206 (405)
T ss_pred HHHHHHHHHHHHHhcC---------------------ccHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHh-hhhhhhhh
Confidence 9999999988864322 2499999987777666666667788887652111 11111111
Q ss_pred HHHHHHHhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhH-hcccCCcccch
Q 010212 256 DMSKVLQVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTA-IGWIPKAKTMN 334 (515)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 334 (515)
..++..+.+. ..+...++.....+... ++.+..+...................+.|.++.+ .|+++.+.
T Consensus 207 ~~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~--- 276 (405)
T TIGR00891 207 MVDILYGGEH------RIANIVMTLAAAMVQSA-GKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTV--- 276 (405)
T ss_pred HHHHHhccch------hhhhhhhhhhHHhhhhh-hhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHH---
Confidence 1111110000 00000000000011111 1111112222222222233333444555666543 45544332
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHH
Q 010212 335 AIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFF 414 (515)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (515)
........++.+++.++.+++.||++||+.+..+..+..+......... .......+.....++
T Consensus 277 ---------~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~ 340 (405)
T TIGR00891 277 ---------ANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIG-------ANVAVLGLGLFFQQM 340 (405)
T ss_pred ---------HHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhC-------CchHHHHHHHHHHHH
Confidence 1245566677888999999999999999988777655433222221111 112222222222233
Q ss_pred hhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccC-chHHHHH
Q 010212 415 SNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSG-VKKALLI 473 (515)
Q Consensus 415 ~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g-~~~~~~~ 473 (515)
...+..+....+..|.+|++.|++++|+.+.+.+++..++|.+.|.+.|..| |+.++..
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 341 LVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred HHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHh
Confidence 3334455666788999999999999999999999999999999999999888 7665544
No 18
>PRK09952 shikimate transporter; Provisional
Probab=100.00 E-value=3e-35 Score=287.55 Aligned_cols=406 Identities=18% Similarity=0.212 Sum_probs=267.3
Q ss_pred hhHHHHHHHHHHhHHHHHHhhhHHHHHHhh-hhhhhhccCCCCCCCCCchhHHHHHH-----HHHHHHHHHHHHHHhhhh
Q 010212 19 WYHFTAIVIAGMGFFTDAYDLFCISLVTKL-LGRIYYYKEGSDSPGTLPDNVASAVN-----GVALCGTLAGQLFFGWLG 92 (515)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~s~~~~g~~~-----s~~~l~~~i~~~~~G~l~ 92 (515)
.++++.+...+++.+.+++|...++.+.|. +.+++++ +.++. .+++. ++.+++..+++++.|+++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~--------~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~ 88 (438)
T PRK09952 18 SRARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFP--------QVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFG 88 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------CCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 345667788888999999999999988875 4555533 33333 34443 455677889999999999
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHhhhcCCCCchhH--HHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHH
Q 010212 93 DKMGRKRVYGMTLMMMVICSLASGLSFGKEPKAV--MITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFA 170 (515)
Q Consensus 93 dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~--~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~ 170 (515)
||+|||+++..+.++++++++++++++++..... +..++++|+++|++.|+..+....++.|++|+++|++..+....
T Consensus 89 Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~ 168 (438)
T PRK09952 89 DRLGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQV 168 (438)
T ss_pred HhhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHH
Confidence 9999999999999999999999999999310000 01588999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhcCCchhhHHHHhccH
Q 010212 171 MQGFGILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKMPETARYTALVAKNA 250 (515)
Q Consensus 171 ~~~~G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~ 250 (515)
+..+|.+++..+...+....+.. ....+|||++|++.+++.++........||+|++...+++.
T Consensus 169 g~~~G~~l~~~~~~~l~~~~~~~---------------~~~~~gWr~~f~~~~~~~l~~~~l~~~~~es~~~~~~~~~~- 232 (438)
T PRK09952 169 GYGVGLLLSTGLVSLISMMTTDE---------------QFLSWGWRIPFLFSIVLVLIALWVRNGMEESAEFEQQQHEQ- 232 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHH---------------HhhccChHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHhhc-
Confidence 99999999888877765432210 01357899999998877666555556688888652111000
Q ss_pred HHHHHHHHHHHHhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhH-hcccCC
Q 010212 251 KQAAADMSKVLQVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTA-IGWIPK 329 (515)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 329 (515)
++. +++.+..+.+ . ++++.........++....++....+.|.++++ .+.+..
T Consensus 233 ~~~---------------------~~~~~~~~~l----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~ 286 (438)
T PRK09952 233 AAA---------------------KKRIPVIEAL----L-RHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRE 286 (438)
T ss_pred ccc---------------------cccCCHHHHH----H-HchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH
Confidence 000 0000111101 1 111112222223333444566666677777654 343321
Q ss_pred cccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHH
Q 010212 330 AKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYS 409 (515)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (515)
. .........+..+++.++.|+++||+|||+.+..+.++..++...+..... . .+....+....
T Consensus 287 ~------------~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~ 350 (438)
T PRK09952 287 L------------FLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALE---A-QSIFWIVFFSI 350 (438)
T ss_pred H------------HHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHH---c-CChHHHHHHHH
Confidence 1 011223334455677788999999999999888776655544333322110 0 11122222222
Q ss_pred HHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhh-hhHHHHHHHHHHhhhcc--CchHHHHHHHHHHHHHHHHHH
Q 010212 410 LTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGK-AGAIVGAFGFLYLADTS--GVKKALLILGGANFLGMLFTF 486 (515)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~-~g~~i~~~~~~~l~~~~--g~~~~~~~~~~~~~~~~~~~~ 486 (515)
+..++......+..+++..|.+|++.|+++.|+.+.... +++.++|.+.+.+.+.. +|...+.+.+++.+++.+..+
T Consensus 351 ~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~ 430 (438)
T PRK09952 351 MLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTAL 430 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHH
Confidence 222222222245567888999999999999999776654 89999999999998844 377777777777787777776
Q ss_pred hcccc
Q 010212 487 LVPES 491 (515)
Q Consensus 487 ~~~~~ 491 (515)
.++++
T Consensus 431 ~~~~~ 435 (438)
T PRK09952 431 LMKDN 435 (438)
T ss_pred Hcccc
Confidence 66653
No 19
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=2.2e-35 Score=293.69 Aligned_cols=437 Identities=25% Similarity=0.345 Sum_probs=322.9
Q ss_pred hHHHHHHHHHHhHHHHHHh--hhHHHHHHhhhhhhhhccCCCCCCCCCch--hHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 010212 20 YHFTAIVIAGMGFFTDAYD--LFCISLVTKLLGRIYYYKEGSDSPGTLPD--NVASAVNGVALCGTLAGQLFFGWLGDKM 95 (515)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~s~--~~~g~~~s~~~l~~~i~~~~~G~l~dr~ 95 (515)
..........++.+..+++ ....++....+.++..... ...+. .+.+++.++..++..+++++.|+++|++
T Consensus 42 ~~~~~~~~~~~~~~~fg~~g~~g~~s~~~~~~~~~~~~~~-----~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~ 116 (513)
T KOG0254|consen 42 FVILLALVAALGGLLFGYDGDIGGISGALDFLQRFASLYD-----LSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRI 116 (513)
T ss_pred ehHHHHHHHHHHHHHhCcccccccchhhHHHHHhcccccc-----cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3445555666677777776 5566666666665441111 11222 5679999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHH
Q 010212 96 GRKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFG 175 (515)
Q Consensus 96 Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G 175 (515)
|||+.++++.+++.++.++++++++ +++++++|+++|+|.|......+.+++|..|++.||...+..+....+|
T Consensus 117 GRk~~l~~~~~~~~iG~ii~~~a~~------~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~G 190 (513)
T KOG0254|consen 117 GRKKTLLLAVVLFLIGAIIIALAPS------WYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIG 190 (513)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhh------HHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHH
Confidence 9999999999999999999999999 8999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhcCCchhhHHHHhccHHHHHH
Q 010212 176 ILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKMPETARYTALVAKNAKQAAA 255 (515)
Q Consensus 176 ~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~ 255 (515)
..++..++....+ ..++||..+.+..+++++..+..+++||+|+|+ .++++.+++.+
T Consensus 191 i~~~~~~~~~~~~----------------------~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L-~~~g~~~~a~~ 247 (513)
T KOG0254|consen 191 ILLGYCINYGTSK----------------------VYAGWRIPLGLALIPAVILALGMLFLPESPRWL-IEKGRLEEAKR 247 (513)
T ss_pred HHHHHHHhhhhcc----------------------CCccHHHHHHHHHHHHHHHHHHHHhCCCChHHH-HHcCChHHHHH
Confidence 9999666665521 115799999999999988777788999999997 34556666666
Q ss_pred HHHHHHHhh---hhHhhhhHH-----Hh---hcCC-cchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhH
Q 010212 256 DMSKVLQVE---LEAEQEKVE-----QE---KGKN-DFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTA 323 (515)
Q Consensus 256 ~~~~~~~~~---~~~~~~~~~-----~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (515)
.+.+.++.+ .+.+.++.+ +. +.+. ..++++ +..++ +..+...+..+.....+.....|.+.+++.
T Consensus 248 ~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~--~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~ 324 (513)
T KOG0254|consen 248 SLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFS-PKVRK--RLIIGLLLQLFQQLTGINYVFYYSTTIFKS 324 (513)
T ss_pred HHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcC-cchHH--HHHHHHHHHHHHHHhCCceEEeehHHHHHh
Confidence 666666521 111111111 00 1111 222333 21222 234455555555556777788888888888
Q ss_pred hcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccC-----C
Q 010212 324 IGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTL-----P 398 (515)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 398 (515)
.|..... ........+..+++..++.++.||+|||+.++.+...+.+++++++........ .
T Consensus 325 ~g~~~~~-------------~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~ 391 (513)
T KOG0254|consen 325 AGLKSDT-------------FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSK 391 (513)
T ss_pred cCCCCch-------------HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCccc
Confidence 7766432 114444555566677777999999999999999999999999988876543221 1
Q ss_pred CchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCchHHHHHHHHHH
Q 010212 399 DHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSGVKKALLILGGAN 478 (515)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~~~~~~~~~~~ 478 (515)
...+..+...++....+..+..++.|.+.+|.+|.+.|+++.++...+++..+.+....+..+.+..+....|..++.++
T Consensus 392 ~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~ 471 (513)
T KOG0254|consen 392 GAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGIC 471 (513)
T ss_pred chhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHH
Confidence 23455566666777777888889999999999999999999999999999998888888887776655345566666666
Q ss_pred HHHHH-HHH-hccccCCCChhhhhhhhhcc
Q 010212 479 FLGML-FTF-LVPESKGKSLEEMSGEAEEE 506 (515)
Q Consensus 479 ~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~ 506 (515)
.+..+ ..+ ++||+|+++.+|.++..+++
T Consensus 472 ~~~~~~fv~~~~pETkg~sleei~~~~~~~ 501 (513)
T KOG0254|consen 472 LLSLIIFVFFFVPETKGLTLEEINELFEEG 501 (513)
T ss_pred HHHHHHHheEEcccCCCCcHHHHHHHHHcC
Confidence 65555 444 88999999999887765443
No 20
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=8.9e-35 Score=281.06 Aligned_cols=374 Identities=10% Similarity=0.062 Sum_probs=264.7
Q ss_pred hHHHHHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhh
Q 010212 20 YHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKR 99 (515)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~ 99 (515)
++|..+..+.++.+..........+.+|.+.+++ |.+.++.|++.+.+.+++.+++++.|+++||+|||+
T Consensus 6 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~----------~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~ 75 (390)
T PRK03545 6 VAWLRVVTLALAAFIFNTTEFVPVGLLSDIAQSF----------HMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRK 75 (390)
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHcchHHHHhHc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHH
Confidence 3455455555554554444455666789999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHH
Q 010212 100 VYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSG 179 (515)
Q Consensus 100 ~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g 179 (515)
++..+.++..+++++++++++ ++.++++|+++|++.+...+...+++.|++|+++|++++++...+.++|..++
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig 149 (390)
T PRK03545 76 LLIGLFVLFIASHVLSALAWN------FTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLG 149 (390)
T ss_pred HHHHHHHHHHHHHHHHHHhcc------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHH
Confidence 999999999999999999999 89999999999999998889999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHH-HHHhcCCchhhHHHHhccHHHHHHHHH
Q 010212 180 GMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYY-WRMKMPETARYTALVAKNAKQAAADMS 258 (515)
Q Consensus 180 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~-~~~~~~e~p~~~~~~~~~~~~~~~~~~ 258 (515)
|++++.+.+ ..|||+.|++.++.+++..+ ....+||.|+. +++ ..+
T Consensus 150 ~~l~~~l~~-----------------------~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~----~~~---~~~--- 196 (390)
T PRK03545 150 LPLGRVIGQ-----------------------YLGWRTTFLAIGGGALITLLLLIKLLPLLPSE----HSG---SLK--- 196 (390)
T ss_pred hhHHHHHHH-----------------------HhcHHHHHHHHHHHHHHHHHHHHHhCCCCCCC----Ccc---hHH---
Confidence 999998853 34599999997777665443 34456665432 000 000
Q ss_pred HHHHhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhH-hcccCCcccchhHH
Q 010212 259 KVLQVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTA-IGWIPKAKTMNAIE 337 (515)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 337 (515)
+.++.++++.. +......++.....+....+.+.+.++ .|+++...
T Consensus 197 --------------------~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~------ 243 (390)
T PRK03545 197 --------------------SLPLLFRRPAL-------VSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFA------ 243 (390)
T ss_pred --------------------HHHHHHhCcHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHH------
Confidence 00111222211 111111122222333333444545444 45554432
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhc
Q 010212 338 EVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNF 417 (515)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (515)
........++.+++.++.+++.||++||+.. .+..+..++...+.... ..........+..+....
T Consensus 244 ------~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~l~~~~-------~~~~~~~~~~~l~g~~~~ 309 (390)
T PRK03545 244 ------TLLLLLFGGAGIIGSVLFSRLGNRHPSGFLL-IAIALLLVCLLLLLPAA-------NSEWHLSVLSIFWGIAIM 309 (390)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHHHHHHHHHHh-------chHHHHHHHHHHHHHHHh
Confidence 2245556677888999999999999987653 44444444333322211 122222233333333333
Q ss_pred CccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHHhccc
Q 010212 418 GPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSGVKKALLILGGANFLGMLFTFLVPE 490 (515)
Q Consensus 418 ~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 490 (515)
...+.......|..| +.+++++|+.+...++|..+||.+.|.+.|..|++..+...+.+.+++.+..+...+
T Consensus 310 ~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 310 CIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIFR 381 (390)
T ss_pred cchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHcc
Confidence 334445566677776 688999999999999999999999999999999999999998888888777664433
No 21
>PRK03893 putative sialic acid transporter; Provisional
Probab=100.00 E-value=1.1e-34 Score=290.13 Aligned_cols=405 Identities=17% Similarity=0.211 Sum_probs=275.1
Q ss_pred cchhHHHHHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhh
Q 010212 17 TQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMG 96 (515)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~G 96 (515)
.++++|+.+..++++.+.+.++....++..|.+.+++ |.+..+.+++.+.+.++..+++++.|+++||+|
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~----------~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g 83 (496)
T PRK03893 14 LNRAQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEF----------GLTTVQAASLISAAFISRWFGGLLLGAMGDRYG 83 (496)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3456778888899999999999999999999999999 999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHH
Q 010212 97 RKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGI 176 (515)
Q Consensus 97 rr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~ 176 (515)
||+++..+.++.+++.++++++++ ++.+++.|++.|++.+...+....++.|++|+++|+++.++...+..+|.
T Consensus 84 ~r~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 157 (496)
T PRK03893 84 RRLAMVISIVLFSVGTLACGFAPG------YWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGA 157 (496)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999988 89999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhcCCchhhHHHHhccHHHHHHH
Q 010212 177 LSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKMPETARYTALVAKNAKQAAAD 256 (515)
Q Consensus 177 ~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~ 256 (515)
.+++.+++.+. +..+||+.|++.++..++.++....+||++++...+++ ++..+.
T Consensus 158 ~~~~~~~~~l~-----------------------~~~~w~~~f~~~~~~~~~~~~~~~~~p~~~~~~~~~~~--~~~~~~ 212 (496)
T PRK03893 158 VVAAQVYSLVV-----------------------PVWGWRALFFIGILPIIFALWLRKNLPEAEDWKEKHAG--KAPVRT 212 (496)
T ss_pred HHHHHHHHHHh-----------------------ccCCHHHHHHHHHHHHHHHHHHHHhCCCchhhhhhccc--cccchh
Confidence 99999999884 45679999988666555555555667887654211111 100000
Q ss_pred HHHHHHhhhhHhhhh------------HHHhhcCCcchh-------------hhhhhhhhhhHHHHHHHHHHHHHHHHHH
Q 010212 257 MSKVLQVELEAEQEK------------VEQEKGKNDFGL-------------FSAKFVRRHGLHLIGTTVTWFLLDVAYY 311 (515)
Q Consensus 257 ~~~~~~~~~~~~~~~------------~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (515)
..+....+....... .-.....+.+.. +......+............+......+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (496)
T PRK03893 213 MVDILYRGEHRIINILLTLAAAAALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSW 292 (496)
T ss_pred HHHHHhcchhHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccc
Confidence 000000000000000 000000000000 0000000000011111111111111112
Q ss_pred HHhhhhhHHHh-HhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHh
Q 010212 312 SQNLFQKDIFT-AIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAI 390 (515)
Q Consensus 312 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~ 390 (515)
....+.|.+++ +.|+++.+. ........++.+++.++.|++.||++||+.+..+..+..+..+.+..
T Consensus 293 ~~~~~lp~~l~~~~g~~~~~~------------g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~ 360 (496)
T PRK03893 293 PIQALLPTYLKTDLGYDPHTV------------ANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFA 360 (496)
T ss_pred hHHHHHHHHHHhhcCCCHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhh
Confidence 24456777774 555554332 22556667778889999999999999999887776555544433322
Q ss_pred hhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCchHH
Q 010212 391 PYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSGVKKA 470 (515)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~~~ 470 (515)
.. ...............+...+..+...++..|.+|++.|++++|+.+....+|..++|.+.|.+.|..|+...
T Consensus 361 ~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~ 434 (496)
T PRK03893 361 IG------GANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTA 434 (496)
T ss_pred cc------ccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHH
Confidence 11 112222222222222233333455667788999999999999999999999999999999999999999887
Q ss_pred HHHHHHHHHH
Q 010212 471 LLILGGANFL 480 (515)
Q Consensus 471 ~~~~~~~~~~ 480 (515)
+...++.+.+
T Consensus 435 ~~~~~~~~~~ 444 (496)
T PRK03893 435 LASLSFSLTF 444 (496)
T ss_pred HHHHHHHHHH
Confidence 7665544433
No 22
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=1.3e-33 Score=247.52 Aligned_cols=429 Identities=21% Similarity=0.394 Sum_probs=325.2
Q ss_pred HHHHcccchhHHHHHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhh
Q 010212 11 ALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGW 90 (515)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~ 90 (515)
.+......+.+|........+++.+.+.....+.+.|.+...+ +.+..+..++......|..+++..||.
T Consensus 66 a~~aigfgrfq~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w----------~~s~~q~~llt~~v~~gmllga~~w~l 135 (528)
T KOG0253|consen 66 AMNAIGFGRFQWYLFFVAGMGWMADAMEMMLLSLILPALDEVW----------GPSEGQAPLLTLSVFLGMLVGAMVWGL 135 (528)
T ss_pred hhhhcCcccchhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhh----------chhhhhhhHHHHHHHhhhhhhhhhhhe
Confidence 3444567888999999999999988888888888899999999 899999999999999999999999999
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHH
Q 010212 91 LGDKMGRKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFA 170 (515)
Q Consensus 91 l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~ 170 (515)
++|++|||+.+.+......+...+.+.++| +..+++.|.+.|+|.|+ .|...++-.|..|..+|...+-.. .
T Consensus 136 ~~d~~grr~~f~~T~l~t~v~~~is~~spn------f~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~ 207 (528)
T KOG0253|consen 136 SADTIGRRKGFNLTFLVTGVFGVISGASPN------FASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-F 207 (528)
T ss_pred ehhhhhcchhhhhhHHHHHHHHHhhcCCCC------eehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-H
Confidence 999999999999999999999999999999 89999999999999999 899999999999999998877666 8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhcCCchhhHHHHhccH
Q 010212 171 MQGFGILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKMPETARYTALVAKNA 250 (515)
Q Consensus 171 ~~~~G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~ 250 (515)
.+.+|.+....+...+. .+.||||.......+..+.....+++|||||+. ..+.++
T Consensus 208 ~waig~v~ea~law~vm-----------------------~~~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~-~~~G~~ 263 (528)
T KOG0253|consen 208 FWAIGQVFEALLAWGVM-----------------------SNFGWRYLLFTSSTPLMFAARFLVWVYESPRFY-LAKGDD 263 (528)
T ss_pred HHHHHHHHHHHHHHHHH-----------------------HhhhHHHHHHHHHhHHHHHHHHHhhcccCcchh-hhcCCh
Confidence 99999999999998886 445699999888888888888889999999997 455666
Q ss_pred HHHHHHHHHHHHhhh----------------hHhhhhHHH-------hhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHH
Q 010212 251 KQAAADMSKVLQVEL----------------EAEQEKVEQ-------EKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLD 307 (515)
Q Consensus 251 ~~~~~~~~~~~~~~~----------------~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (515)
+++.+.+++..+.|. ++|..+.++ +...+..+++..+.+ + ..+.....|+...
T Consensus 264 ~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~nLlsp~lr-k---ttlllw~iwfgna 339 (528)
T KOG0253|consen 264 YKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGTTNLLSPKLR-K---TTLLLWRIWFGNA 339 (528)
T ss_pred HHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccccccchHhhcChHHH-H---HHHHHHHHHHhhH
Confidence 777777777655331 111111111 111122333333332 2 3566677788888
Q ss_pred HHHHHHhhhhhHHHhHhc-------ccCCcccch-hHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHH
Q 010212 308 VAYYSQNLFQKDIFTAIG-------WIPKAKTMN-AIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFF 379 (515)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~ 379 (515)
+.+|+..++...+++.-. ..+.+.... .-..+....+.-.++.....+.|.++.++++||+|||+.+...++
T Consensus 340 fsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRKkTMal~l~ 419 (528)
T KOG0253|consen 340 FSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRKKTMALSLI 419 (528)
T ss_pred HHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcchhHHHHHHH
Confidence 899998888877776521 111111110 000111223335666777889999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHH
Q 010212 380 FMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFL 459 (515)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~ 459 (515)
+.+++.+++.... ......+..+..-.+.. +.+.+.+.|..|++|+..|+++.|.+.....+|+++.|.+.
T Consensus 420 ~f~iflfll~~c~-------~rn~~tvllf~arafis-g~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA- 490 (528)
T KOG0253|consen 420 LFGIFLFLLTTCK-------TRNAYTVLLFTARAFIS-GAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA- 490 (528)
T ss_pred HHHHHHHHHHHhc-------CcchhHHHHHHHHHHHh-chheEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHH-
Confidence 9888887776544 22223333333333333 34568899999999999999999999999999999999998
Q ss_pred HhhhccCchHHHHHHHHHHHHHHHHHHhc-cccCCCC
Q 010212 460 YLADTSGVKKALLILGGANFLGMLFTFLV-PESKGKS 495 (515)
Q Consensus 460 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 495 (515)
+........+..+.+.+++++.++..++ .|+|+|.
T Consensus 491 -~~~e~s~sl~i~vy~~~~ilagIavcffPiEtkGR~ 526 (528)
T KOG0253|consen 491 -MRAELSTSLPIFVYGALFILAGIAVCFFPIETKGRS 526 (528)
T ss_pred -HHhccceeehHHHHHHHHHHHHHHheeeeeccCCCC
Confidence 3334445566677778888887777755 4787765
No 23
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=1.7e-34 Score=273.87 Aligned_cols=357 Identities=11% Similarity=0.030 Sum_probs=246.7
Q ss_pred HHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHh
Q 010212 36 AYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLAS 115 (515)
Q Consensus 36 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~ 115 (515)
......+++.+|.+.+|+ ++|.++.|++.+.+.+++.+++++.|+++||+|||+++..+......+.+..
T Consensus 4 ~~~~~~~~~~lp~i~~~~----------~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~ 73 (368)
T TIGR00903 4 QAIWVTFSPVLSLVAEDI----------DVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRL 73 (368)
T ss_pred hHHHHHHHhhHHHHHHHh----------CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHH
Confidence 445567789999999999 9999999999999999999999999999999999998766655554443333
Q ss_pred hhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 010212 116 GLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFP 195 (515)
Q Consensus 116 ~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~ 195 (515)
...++ ++.++++|+++|++.+. .......++|++|+++|++++++.+.+..+|.+++++++..+.
T Consensus 74 ~~~~~------~~~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~-------- 138 (368)
T TIGR00903 74 LDPFN------YEWLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIY-------- 138 (368)
T ss_pred HHhcc------HHHHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------
Confidence 33366 89999999999999986 5666677799999999999999999999999999999999985
Q ss_pred CCccCCCCCCccccCCCchHHHHHHHhHHHHHH-HHHHHHhcCCchhhHHHHhccHHHHHHHHHHHHHhhhhHhhhhHHH
Q 010212 196 APIYSANPAASTVPEADYIWRIILMFGAIPALL-TYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVELEAEQEKVEQ 274 (515)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~-~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (515)
+..|||+.|++.++++++ .++.++++||+|++. .++. +..+ .
T Consensus 139 ---------------~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p~~~--~~~~--~~~~----------------~-- 181 (368)
T TIGR00903 139 ---------------TAGGLQLLIIPIAAVAAAGIILVLAALPALPFQA--AEGF--GFKD----------------A-- 181 (368)
T ss_pred ---------------HccchHHHHHHHHHHHHHHHHHHHHHcCCCCCCC--CCCc--chHH----------------H--
Confidence 346699999996666555 455667789988652 1100 0000 0
Q ss_pred hhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccchhHHHHHHHHHHHHHHHHhhh
Q 010212 275 EKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKIARAQTLIALCST 354 (515)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (515)
.++.++.++++ .++.....+++....++....|.|.++++.+++.. .+. ......+
T Consensus 182 --~~~~~~ll~~~-------~~~~~~~~~~~~~~~~~~~~~wlp~~L~~~g~s~~------------~~~-~~~l~~~-- 237 (368)
T TIGR00903 182 --VKEFGALAGRK-------DLWIIGAILGFGVALFDNLAIWLEAALRPAGLEDI------------AGD-AVALAIL-- 237 (368)
T ss_pred --HHHHHHHHcCh-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCChH------------HHH-HHHHHHH--
Confidence 00112223222 34556666777777888888999999987664321 011 2222222
Q ss_pred hhHHHHHHHHHHhhchh---hHHHH-HHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCcccccccccccc
Q 010212 355 VPGYWFTVALIDKIGRF---AIQLM-GFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEI 430 (515)
Q Consensus 355 ~~~~~~~g~l~d~~g~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (515)
.+.+..++++||..|| +.... ...+.++....+.... +....+ ......+++.....+..+++.+|.
T Consensus 238 -~g~~g~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~~-------~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~ 308 (368)
T TIGR00903 238 -AGLIGVAVIPDRVARAGLRSIYIRAAALLIAAFFLALAFEL-------NRLALF-AFIGIAGLLMLPAYAIIMDWIGKF 308 (368)
T ss_pred -HHHHHHHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHcc-------ccHHHH-HHHHHHHHhhhhhHHHHHHHHHHh
Confidence 2333457788877543 33222 2333333222222111 112222 222222233333345677888999
Q ss_pred CchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHHhcc
Q 010212 431 FPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSGVKKALLILGGANFLGMLFTFLVP 489 (515)
Q Consensus 431 ~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 489 (515)
+|++.|+++.|+.+..+++++..+|.+.+.+.. +....|.++++..+++.+....++
T Consensus 309 ~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~~~~~ 365 (368)
T TIGR00903 309 CDKELHGKAAGAIGFTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAIALLLP 365 (368)
T ss_pred cchhhcCcccchhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999998873 777888888888888777765433
No 24
>PRK15075 citrate-proton symporter; Provisional
Probab=100.00 E-value=3.8e-34 Score=280.04 Aligned_cols=369 Identities=16% Similarity=0.192 Sum_probs=245.9
Q ss_pred HHHHHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHH-HHH-----HHHHHHHHHHHhhhhhh
Q 010212 21 HFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVN-GVA-----LCGTLAGQLFFGWLGDK 94 (515)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~-s~~-----~l~~~i~~~~~G~l~dr 94 (515)
|++....++++.+++++|+..+++..|.+.+++ +.++.+.+.+. +.. .++..+++++.|+++||
T Consensus 13 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~----------~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr 82 (434)
T PRK15075 13 KARAILRVTSGNFLEMFDFFLFGFYATAIAKTF----------FPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDR 82 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------CCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhh
Confidence 455778888999999999999999999999999 77776655432 222 23335789999999999
Q ss_pred hhhhhHHHHHHHHHHHHHHHhhhcCCCCchhHHH--------HHHHHHHHhhhccccccchhhHhhhhccccccchhHHH
Q 010212 95 MGRKRVYGMTLMMMVICSLASGLSFGKEPKAVMI--------TLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIA 166 (515)
Q Consensus 95 ~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~ 166 (515)
+|||++++.+.+++++++++++++++ ++ .++++|+++|++.+...+....+++|++|+++|+++++
T Consensus 83 ~Grr~~l~~~~~~~~~~~~l~~~~~~------~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~ 156 (434)
T PRK15075 83 VGRRKGLIVTLSIMASGTLLIAFVPG------YATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTS 156 (434)
T ss_pred hchHHHHHHHHHHHHHHHHHHHhCCc------HHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHH
Confidence 99999999999999999999999998 44 47899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhcCCchhhHHHH
Q 010212 167 AVFAMQGFGILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKMPETARYTALV 246 (515)
Q Consensus 167 ~~~~~~~~G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~ 246 (515)
+...+.++|..+++.+++.+....... ..+..|||++|++.++..++........||++++. +
T Consensus 157 ~~~~~~~~g~~~g~~~g~~l~~~~~~~---------------~~~~~gWr~~f~~~~~~~~~~~~~~~~~~e~~~~~--~ 219 (434)
T PRK15075 157 WQSASQQVAVVFAALLGYLLNQWLSPA---------------QMAEWGWRIPFLIGCLIVPFIFLIRRSLEETEEFL--A 219 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHH---------------HHhccchHHHHHHHHHHHHHHHHHHHhcCCCHHHH--H
Confidence 999999999999999988875432210 01457899999986544333332223344433210 0
Q ss_pred hccHHHHHHHHHHHHHhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhH-hc
Q 010212 247 AKNAKQAAADMSKVLQVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTA-IG 325 (515)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 325 (515)
++ ++.+.++.++... ++++.........+.....++....+.|.++++ .|
T Consensus 220 ~~---------------------------~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g 270 (434)
T PRK15075 220 RK---------------------------HRPSMREIFRSLA--ANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLH 270 (434)
T ss_pred hh---------------------------hccccccHHHHHH--HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 00 0001111111111 111112222222333345566777788888876 56
Q ss_pred ccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHH-HHhhhhcccCCCchHHH
Q 010212 326 WIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFA-LAIPYHHWTLPDHRIGF 404 (515)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 404 (515)
+++.+ +........++.+++.++.|+++||+|||+.+..+..+..+.... +.... ........
T Consensus 271 ~~~~~------------~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 334 (434)
T PRK15075 271 LSAAD------------SLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLV----AAPSFARM 334 (434)
T ss_pred CCHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHH----cCCchHHH
Confidence 65432 122455666777888999999999999999877665443322211 11111 01111111
Q ss_pred HHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhh-hHHHHHHHHHHhhhccCch
Q 010212 405 VVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKA-GAIVGAFGFLYLADTSGVK 468 (515)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~-g~~i~~~~~~~l~~~~g~~ 468 (515)
.....+...+. ....+..+.+..|.+|++.|+++.++.+.+... ++.++|.+.|.+.|..|+.
T Consensus 335 ~~~~~~~~~~~-g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 335 LAVELWLSFLY-GSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred HHHHHHHHHHH-HHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCc
Confidence 11111111111 122334456778999999999999997666554 5888999999999988853
No 25
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=100.00 E-value=4.6e-34 Score=280.79 Aligned_cols=414 Identities=13% Similarity=0.110 Sum_probs=268.7
Q ss_pred chhHHHHHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhh
Q 010212 18 QWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGR 97 (515)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Gr 97 (515)
++++|.++..+++.....+.++..++...|.+. +. +.+.++.+++.+.+.+++.+++++.|+++||+||
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~-~~----------g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~ 92 (452)
T PRK11273 24 RRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLV-EQ----------GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNP 92 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH-Hc----------CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCC
Confidence 344566666666777777788777788888765 34 6899999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHH
Q 010212 98 KRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGIL 177 (515)
Q Consensus 98 r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~ 177 (515)
|++++.+.++.+++.+++++++... .+++.+++.|++.|++.+...+.....+.|++|+++|++++++++.+.++|..
T Consensus 93 k~~l~~~~~~~~i~~~~~~~~~~~~--~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 170 (452)
T PRK11273 93 RVFLPAGLILAAAVMLFMGFVPWAT--SSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGG 170 (452)
T ss_pred chhHHHHHHHHHHHHHHHHhhhccc--ccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhh
Confidence 9999999999999999888764110 01678899999999999988888888999999999999999999999998864
Q ss_pred -HHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHH-HHHHHHhcCCchhhHHHHhccHHHHHH
Q 010212 178 -SGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALL-TYYWRMKMPETARYTALVAKNAKQAAA 255 (515)
Q Consensus 178 -~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~-~~~~~~~~~e~p~~~~~~~~~~~~~~~ 255 (515)
.+++++..+. ...+||+.|++.++..++ .++..+++||+|+.. ..+++++..+
T Consensus 171 ~~~~l~~~~~~-----------------------~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~ 225 (452)
T PRK11273 171 LPPLLFLLGMA-----------------------WFNDWHAALYMPAFAAILVALFAFAMMRDTPQSC--GLPPIEEYKN 225 (452)
T ss_pred HHHHHHHHHHH-----------------------HhccHHHHHHHHHHHHHHHHHHHHHHccCCHhhc--CCCChhhhhh
Confidence 4555443332 113599999997666555 455567788887541 1111111000
Q ss_pred HHHHHHHhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhH-hcccCCcccch
Q 010212 256 DMSKVLQVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTA-IGWIPKAKTMN 334 (515)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 334 (515)
+.+++.+ .+++++.+.++.++....+ .+.++...+..++.....+....+.|.++++ .++++..
T Consensus 226 --------~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~---- 290 (452)
T PRK11273 226 --------DYPDDYN-EKHEQELTAKQIFMQYVLP--NKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDK---- 290 (452)
T ss_pred --------ccccccc-cccCCCccHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH----
Confidence 0000000 0001111122222221111 1234444455545455666777888998876 4555432
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhh--chhhHHH-HHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHH
Q 010212 335 AIEEVYKIARAQTLIALCSTVPGYWFTVALIDKI--GRFAIQL-MGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLT 411 (515)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~--g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (515)
+........++.+++.++.|+++||+ +||+... ....+..++...+.... ..+.....+ ....
T Consensus 291 --------~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~-~~~~ 356 (452)
T PRK11273 291 --------SSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNP-----AGNPTVDMA-CMIV 356 (452)
T ss_pred --------HHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhc-----ccChHHHHH-HHHH
Confidence 11244556677788899999999999 4444322 22222222222221111 011111111 1222
Q ss_pred HHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHH-HHHHHHHhhhccCchHHHHHHHHHHHHHHHHHHhccc
Q 010212 412 FFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIV-GAFGFLYLADTSGVKKALLILGGANFLGMLFTFLVPE 490 (515)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i-~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 490 (515)
.+....+.......+..|.+|++.||+++|+.+...++|+.+ +|.+.|.+.|..||+..|.+++++++++.+......+
T Consensus 357 ~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 436 (452)
T PRK11273 357 IGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMI 436 (452)
T ss_pred HHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhc
Confidence 222222222223345679999999999999999999998765 7999999999999999999888888888777774444
Q ss_pred cCCCChhh
Q 010212 491 SKGKSLEE 498 (515)
Q Consensus 491 ~~~~~~~~ 498 (515)
.++|+.+|
T Consensus 437 ~~~~~~~~ 444 (452)
T PRK11273 437 GEKRHHEE 444 (452)
T ss_pred cccchHHH
Confidence 33443333
No 26
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=8.6e-34 Score=273.65 Aligned_cols=377 Identities=12% Similarity=0.056 Sum_probs=270.2
Q ss_pred HHHHHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhH
Q 010212 21 HFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRV 100 (515)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~ 100 (515)
.|.....++.+.+..... ..+++..|.+++|+ ++|.++.+++.+.+.+++.+++++.|+++||+|||++
T Consensus 8 ~~~~~~~~~~~~~~~~~~-~~~~~~lp~i~~~~----------~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~ 76 (393)
T PRK09705 8 NFMLLVLVLIGLNMRPLL-TSVGPLLPQLRQAS----------GMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRS 76 (393)
T ss_pred HHHHHHHHHHHHHcchhh-hccchhHHHHHHHh----------CCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHH
Confidence 344444555554443333 66789999999999 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHH
Q 010212 101 YGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGG 180 (515)
Q Consensus 101 l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~ 180 (515)
+..+..+++++.++++++++ ++.++++|+++|++.+...+....++.|++| ++|+++++++..+..+|..+|+
T Consensus 77 l~~~~~l~~~~~~~~~~a~~------~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~ 149 (393)
T PRK09705 77 VAISLLLIAVGALMRELYPQ------SALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGA 149 (393)
T ss_pred HHHHHHHHHHHHHHHHHCcc------hHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999 7899999999999999999999999999997 7799999999999999999999
Q ss_pred HHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhc-CCchhhHHHHhccHHHHHHHHHH
Q 010212 181 MVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKM-PETARYTALVAKNAKQAAADMSK 259 (515)
Q Consensus 181 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~-~e~p~~~~~~~~~~~~~~~~~~~ 259 (515)
.+++.+.+.. .+||+.+.+.++..++.....+.. ++.|+. ++
T Consensus 150 ~~~~~l~~~~----------------------~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~---------- 192 (393)
T PRK09705 150 AITPWLVQHS----------------------ETWYQTLAWWALPAVVALFAWWWQSAREVAS-----SH---------- 192 (393)
T ss_pred HHHHHHHHhc----------------------CCHHHHHHHHHHHHHHHHHHHHHHhcCCCcc-----cc----------
Confidence 9998875321 359998877555544433333222 221110 00
Q ss_pred HHHhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccchhHHHH
Q 010212 260 VLQVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEV 339 (515)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (515)
+++.+.++.++++ ..+...+..+.....++....+.|.++++.|+++...+.
T Consensus 193 ---------------~~~~~~~~~l~~~-------~~~~l~~~~~~~~~~~~~~~~~lp~~l~~~g~s~~~ag~------ 244 (393)
T PRK09705 193 ---------------KTTTTPVRVVFTP-------RAWTLGVYFGLINGGYASLIAWLPAFYIEIGASAQYSGS------ 244 (393)
T ss_pred ---------------CCCcCCcccccCH-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhH------
Confidence 0000111111111 122233333444456667777888888877766554332
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCc
Q 010212 340 YKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGP 419 (515)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (515)
......++.++++++.+++.||++||+....+..+..++..++.... ..... ... .+ .+......
T Consensus 245 ------~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~-~~~-~l-~g~g~g~~ 309 (393)
T PRK09705 245 ------LLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLP------LQLPV-LWA-MV-CGLGLGGA 309 (393)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHcc------chHHH-HHH-HH-HHHhccch
Confidence 56677788899999999999999999988887776666655443221 11111 111 11 22222233
Q ss_pred cccccccccccC-chhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccC-chHHHHHHHHHHHHHHHHHH-hccccCCCC
Q 010212 420 NTTTFVVPAEIF-PARLRSTCHGISAASGKAGAIVGAFGFLYLADTSG-VKKALLILGGANFLGMLFTF-LVPESKGKS 495 (515)
Q Consensus 420 ~~~~~~~~~~~~-p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 495 (515)
.+.......+.. |++.+++.+|+.+...+++..++|.+.|++.|..| +...|.+..+++++..++.. +.+|++++.
T Consensus 310 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (393)
T PRK09705 310 FPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPARFPQL 388 (393)
T ss_pred HHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccccch
Confidence 444444555655 46789999999999999999999999999999876 77778877777777666655 667766554
No 27
>TIGR00895 2A0115 benzoate transport.
Probab=100.00 E-value=7.4e-34 Score=276.51 Aligned_cols=388 Identities=22% Similarity=0.331 Sum_probs=270.5
Q ss_pred HHcccchhHHHHHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhh
Q 010212 13 DVAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLG 92 (515)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~ 92 (515)
++.+.++++|+.+..+.+..+..+++....++..|.+.+++ |.+..+.+++.+.+.++..+++++.|+++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~g~l~ 76 (398)
T TIGR00895 7 RKQPLSRYQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEW----------GLDPVQLGFLFSAGLIGMAFGALFFGPLA 76 (398)
T ss_pred hhCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhcc----------CCCHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 33445566777777777888888888888999999999999 99999999999999999999999999999
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHH
Q 010212 93 DKMGRKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQ 172 (515)
Q Consensus 93 dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~ 172 (515)
||+|||+.+..+.++.+++.++..++++ ++.+++.|++.|++.+...+...+++.|++|+++|++++++...+.
T Consensus 77 d~~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 150 (398)
T TIGR00895 77 DRIGRKRVLLWSILLFSVFTLLCALATN------VTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGY 150 (398)
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHccc------hHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHH
Confidence 9999999999999999999999999888 7899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHH-HHHHHHHHhcCCchhhHHHHhccHH
Q 010212 173 GFGILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPA-LLTYYWRMKMPETARYTALVAKNAK 251 (515)
Q Consensus 173 ~~G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~-~~~~~~~~~~~e~p~~~~~~~~~~~ 251 (515)
.+|..+++.+++.+. +..+||+.|++.++.. +...+..+++||++++. .+++.+
T Consensus 151 ~~g~~~~~~~~~~l~-----------------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 205 (398)
T TIGR00895 151 PIGAAVGGFLAGWLI-----------------------PVFGWRSLFYVGGIAPLLLLLLLMRFLPESIDFL--VSKRPE 205 (398)
T ss_pred HHHHHHHHHHHHHHh-----------------------hcccceeehhhhhhHHHHHHHHHHHhCCCCChHH--HhcCHH
Confidence 999999999998885 4456999999875444 44555567789987653 222222
Q ss_pred HHHHHHHHHHHhhhhHhhhhHHH--hhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCC
Q 010212 252 QAAADMSKVLQVELEAEQEKVEQ--EKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPK 329 (515)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (515)
+..+..++....+.+++.++.++ ++++..++..+....++..+..+......+.....++....+.|.+.++.++++.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 285 (398)
T TIGR00895 206 TVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLMVELGFSLS 285 (398)
T ss_pred HHHHHHHHHHHhccccccccccccccccchhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 22222222211111110000000 0011111111111111112223333333344445566666777777766666554
Q ss_pred cccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHH
Q 010212 330 AKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYS 409 (515)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (515)
..+ .......++.+++.++.+++.||++||+... ...+..+...++.... .+.... ....
T Consensus 286 ~~~------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~------~~~~~~-~~~~ 345 (398)
T TIGR00895 286 LAA------------TGGALFNFGGVIGSIIFGWLADRLGPRVTAL-LLLLGAVFAVLVGSTL------FSPTLL-LLLG 345 (398)
T ss_pred HHH------------HHHHHHHHHHHHHHHHHHHHHhhcchHHHHH-HHHHHHHHHHHHHHHh------hCHHHH-HHHH
Confidence 322 2556666778889999999999999984443 3333333333332211 112222 2222
Q ss_pred HHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHh
Q 010212 410 LTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYL 461 (515)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l 461 (515)
+..+.......+...++..|.+|++.|+++.|+.+.+..+|..++|.+.|.+
T Consensus 346 ~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 346 AIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 3333333334566778899999999999999999999999999999999875
No 28
>PRK03699 putative transporter; Provisional
Probab=100.00 E-value=7.9e-34 Score=274.53 Aligned_cols=377 Identities=12% Similarity=0.085 Sum_probs=275.1
Q ss_pred hHHHHHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhh
Q 010212 20 YHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKR 99 (515)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~ 99 (515)
++++....++++++..+.+....++.+|.+.+++ ++|.++.+++.+.+.+++.+++++.|++.||+|||+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~----------~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~ 73 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMGPIAEYF----------NLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKR 73 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHh----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 4566777778888999999999999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHH
Q 010212 100 VYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSG 179 (515)
Q Consensus 100 ~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g 179 (515)
++..+.++.+++.++++++++ ++.+++.|+++|++.+...+...+++.|++|+++|+++++..+....+|..++
T Consensus 74 ~~~~~~~~~~i~~~l~~~~~~------~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~ 147 (394)
T PRK03699 74 QLIFGFALMILAVAGLMFSHS------LALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIF 147 (394)
T ss_pred HHHHHHHHHHHHHHHHHHcch------HHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999988 89999999999999999889999999999999999999999888889999999
Q ss_pred HHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhcCCchhhHHHHhccHHHHHHHHHH
Q 010212 180 GMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKMPETARYTALVAKNAKQAAADMSK 259 (515)
Q Consensus 180 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~ 259 (515)
|.+.+.+.. +..+||+.|.+.++..++..++.++ .+.|+. .++++ +
T Consensus 148 ~~~~~~l~~----------------------~~~gw~~~f~~~~~~~~~~~~~~~~-~~~p~~--~~~~~-~-------- 193 (394)
T PRK03699 148 PIIAAYLLA----------------------RSIEWYWVYACIGLVYVAIFILTLF-SEFPAL--GKHAP-K-------- 193 (394)
T ss_pred HHHHHHHHh----------------------ccccHHHHHHHHHHHHHHHHHHHHh-cCCccc--cccCc-c--------
Confidence 988877641 3457999999877766654444333 222221 00000 0
Q ss_pred HHHhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhH-hcccCCcccchhHHH
Q 010212 260 VLQVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTA-IGWIPKAKTMNAIEE 338 (515)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 338 (515)
+++... +.. .+ +.++...+..++....++....+.|.++++ .|+++.+.+.
T Consensus 194 ---------------~~~~~~----~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~----- 245 (394)
T PRK03699 194 ---------------ADKPVA----KEK-WG---IGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGN----- 245 (394)
T ss_pred ---------------ccCccc----ccc-CC---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhH-----
Confidence 000000 000 01 122333334444445566677888988865 4665544222
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcC
Q 010212 339 VYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFG 418 (515)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (515)
......++..+++++.++++||+++|+.+.....+..+...++.... +..... ...+..++...+
T Consensus 246 -------~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~-------~~~~~~-~~~~~~G~~~~~ 310 (394)
T PRK03699 246 -------LVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTD-------DPSHLL-YAILGLGFFSSA 310 (394)
T ss_pred -------HHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcC-------CchHHH-HHHHHHHHHHHH
Confidence 44555667788999999999999999988776666555444433211 122222 222233333333
Q ss_pred ccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHHhccc
Q 010212 419 PNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSGVKKALLILGGANFLGMLFTFLVPE 490 (515)
Q Consensus 419 ~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 490 (515)
..+...+...|..| +.+++..+......++|..++|.+.|++.|..|++..++..+++++++.+......+
T Consensus 311 ~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (394)
T PRK03699 311 IYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMCILLGF 381 (394)
T ss_pred HHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHHHHHHH
Confidence 34555556667665 446777889999999999999999999999999999998888888877766664443
No 29
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=100.00 E-value=2.3e-33 Score=272.48 Aligned_cols=376 Identities=14% Similarity=0.019 Sum_probs=261.5
Q ss_pred HHHHHHHHhHHHHHHhhhHHHHHHhh-hhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHH
Q 010212 23 TAIVIAGMGFFTDAYDLFCISLVTKL-LGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVY 101 (515)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l 101 (515)
+.+..+.+..+...++..+..+.+|. +.+++ +.|..+.|++.+++.+++.+++++.|+++||+|||+++
T Consensus 15 ~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~----------g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l 84 (399)
T PRK05122 15 LRIVSIVMFTFISYLTIGLPLAVLPGYVHDQL----------GFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAV 84 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------CccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchH
Confidence 34445566667777777778888886 67788 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhcCCCC--chhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHH
Q 010212 102 GMTLMMMVICSLASGLSFGKE--PKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSG 179 (515)
Q Consensus 102 ~~~~~~~~i~~~~~~~~~~~~--~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g 179 (515)
..+.++++++.+.+.++...+ ....++.+++.|+++|++.+...+...+++.|++|+++|++++++...+..+|.++|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g 164 (399)
T PRK05122 85 VFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIG 164 (399)
T ss_pred HHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHH
Confidence 999999888877665542100 001166899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhcCCchhhHHHHhccHHHHHHHHHH
Q 010212 180 GMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKMPETARYTALVAKNAKQAAADMSK 259 (515)
Q Consensus 180 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~ 259 (515)
+.+++.+. +..|||+.+++.++..++..+.....|++++. +++ +
T Consensus 165 ~~l~~~l~-----------------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~-------- 208 (399)
T PRK05122 165 APLGVLLY-----------------------HWGGLAGLGLLIMLLALLGLLLARPRPAVPPV----KGE-R-------- 208 (399)
T ss_pred HHHHHHHH-----------------------HcccHHHHHHHHHHHHHHHHHHHhcCCCCCCC----Ccc-c--------
Confidence 99999885 34569999887666555443333323332210 000 0
Q ss_pred HHHhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccchhHHHH
Q 010212 260 VLQVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEV 339 (515)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (515)
.+.++.++.. +. ...........+.....+.+.+..+.++.. .
T Consensus 209 ------------------~~~~~~~~~~--~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-------- 251 (399)
T PRK05122 209 ------------------LPFRRVLGRV--WP-------YGMGLALASIGFGTIATFITLYYAARGWDG--A-------- 251 (399)
T ss_pred ------------------hhHHHHHHHH--HH-------HHHHHHHHHHHHHHHHHHHHHHHHHccccc--c--------
Confidence 0000111100 00 001111112233344455565555544411 0
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCc
Q 010212 340 YKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGP 419 (515)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (515)
........++.+++.++.+++.||+++|+.+..+..+..++.+++.... +.+... ...++.+++....
T Consensus 252 ----~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~-~~~~l~G~~~~~~ 319 (399)
T PRK05122 252 ----ALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAP-------SPWMAL-IGAALTGFGFSLV 319 (399)
T ss_pred ----hHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhc-------cHHHHH-HHHHHHHHhHHHH
Confidence 1123445566777888999999999999988887777776665554322 122222 2222333322223
Q ss_pred cccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHHhccccCC
Q 010212 420 NTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSGVKKALLILGGANFLGMLFTFLVPESKG 493 (515)
Q Consensus 420 ~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (515)
.+.......|..|++.|+++.|+.+...++|..+++.+.|.+.+..|++..+.+.+++++++.+..++++++++
T Consensus 320 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (399)
T PRK05122 320 FPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRRAP 393 (399)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 44445566788999999999999999999999999999999999999999999988888888777766655444
No 30
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=2.9e-34 Score=277.26 Aligned_cols=368 Identities=16% Similarity=0.094 Sum_probs=257.0
Q ss_pred HHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHH
Q 010212 26 VIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTL 105 (515)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~ 105 (515)
....+..+..+ .+..+++..|.+.+++ |++.++.+++.+++.+++.+++++.|+++||+|||+++..+.
T Consensus 7 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~----------~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~ 75 (377)
T TIGR00890 7 VGTVIMCFTSG-YVYTWTLLAPPLGRYF----------GVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGG 75 (377)
T ss_pred HHHHHHHHHhh-HHhhhhhHHHHHHHHh----------CCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhH
Confidence 33333333333 3567789999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHH
Q 010212 106 MMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAII 185 (515)
Q Consensus 106 ~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~ 185 (515)
++.+++.++++++++ ++.++++|++.|++.+...+.....+.|++| ++|+++.++...+.++|..+++++...
T Consensus 76 ~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~ 148 (377)
T TIGR00890 76 ILYGLGFTFYAIADS------LAALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITS 148 (377)
T ss_pred HHHHHHHHHHHHHHH------HHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHH
Confidence 999999999999998 8999999999999999888888889999997 569999999999999998876666655
Q ss_pred HHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHH-HHhcCCchhhHHHHhccHHHHHHHHHHHHHhh
Q 010212 186 VSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYW-RMKMPETARYTALVAKNAKQAAADMSKVLQVE 264 (515)
Q Consensus 186 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~-~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~ 264 (515)
+. +..+||+.|++.++..++..+. .++++|+|+. ..+++ ++.
T Consensus 149 ~~-----------------------~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~----------- 191 (377)
T TIGR00890 149 VI-----------------------NLEGVPAAFIYMGIIFLLVIVLGAFLIGYPPGQ--LIKTN-IEV----------- 191 (377)
T ss_pred HH-----------------------hcccHHHHHHHHHHHHHHHHHHHHHheecCchh--ccccC-ccc-----------
Confidence 53 3456999999977776665443 4455554432 00000 000
Q ss_pred hhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccchhHHHHHHHHH
Q 010212 265 LEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKIAR 344 (515)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (515)
++++.+.++.++++. .+......+...........+.+.+.++.++++.. ..
T Consensus 192 ---------~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~ 243 (377)
T TIGR00890 192 ---------SVKDYTVWEMLRTPQ-------FWVLYLSFFLNAVSGLLLIGLYKPYGQSLGLSDGF------------LV 243 (377)
T ss_pred ---------chhhhhHHHHHcCcc-------HHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHH------------HH
Confidence 000001111222211 11122222222222222333344454555543221 22
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCcccccc
Q 010212 345 AQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTF 424 (515)
Q Consensus 345 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (515)
.......++.+++.++.+++.||++||+.+..+..+..++.+++..... .............+.......+...
T Consensus 244 ~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~g~~~g~~~~~~~ 317 (377)
T TIGR00890 244 LAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPM------LNDVLFLATVALVFFTWGGTISLFP 317 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHccc------chhHHHHHHHHHHHHHhccchhccH
Confidence 2455666778889999999999999999988887777777665543321 1111111112222222223344556
Q ss_pred ccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCchHHHHHHHHHHHHHH
Q 010212 425 VVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSGVKKALLILGGANFLGM 482 (515)
Q Consensus 425 ~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~ 482 (515)
.+..|.+|+++|+++.|+.+....+|..++|.+.|.+.+..||+..|.+.+++.+++.
T Consensus 318 ~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 318 SLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHhc
Confidence 6788999999999999999999999999999999999999999999988877776654
No 31
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=100.00 E-value=3e-33 Score=275.77 Aligned_cols=397 Identities=14% Similarity=0.087 Sum_probs=256.0
Q ss_pred cccchhHHHHHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 010212 15 AKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDK 94 (515)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr 94 (515)
.+..+++++.+...+...+...++...+++..|.+.+++ |++.++.+++.+.+.+++.+++++.|+++||
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----------gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr 97 (476)
T PLN00028 28 FSFARPHMRAFHLSWISFFTCFVSTFAAAPLLPIIRDNL----------NLTKSDIGNAGIASVSGSIFSRLAMGPVCDL 97 (476)
T ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444566666666777777777788889999999999 9999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHH
Q 010212 95 MGRKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGF 174 (515)
Q Consensus 95 ~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~ 174 (515)
+|||+++..+.++++++.++++++++ ++.++++|+++|++.+.. .....+++|++|+++|++++++.....++
T Consensus 98 ~G~r~~~~~~~~~~~~~~~~~~~~~s------~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~ 170 (476)
T PLN00028 98 YGPRYGSAFLLMLTAPAVFCMSLVSS------ATGFIAVRFFIGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNL 170 (476)
T ss_pred hCChHHHHHHHHHHHHHHHHHHHhcC------HHHHHHHHHHHHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHH
Confidence 99999999999999999999999988 789999999999988764 45667899999999999999999888888
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhcC-CchhhHHHHhccHHHH
Q 010212 175 GILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKMP-ETARYTALVAKNAKQA 253 (515)
Q Consensus 175 G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~-e~p~~~~~~~~~~~~~ 253 (515)
|..+++.+.+.+........ ..+..|||+.|++.+++.++..+..++++ +.|+.. .++.
T Consensus 171 g~~~~~~~~~~i~~~~~~~~--------------~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~~~------~~~~ 230 (476)
T PLN00028 171 GGGVTQLLMPLVFPLIKDAG--------------APSFTAWRIAFFVPGLLHIIMGILVLTLGQDLPDGN------YREL 230 (476)
T ss_pred HHHHHHHHHHHHHHHHHhcC--------------CcchhhhHHHHHHHHHHHHHHHHHHHHHcCcCCCCc------hhhH
Confidence 88888777766543322100 01235799999998777766544444444 444210 0000
Q ss_pred HHHHHHHHHhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhH-hcccCCccc
Q 010212 254 AADMSKVLQVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTA-IGWIPKAKT 332 (515)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 332 (515)
.+ + .+.++.+..+.++.....+ ..+...+.++......+....+.|.++.+ .|+++..
T Consensus 231 ~~------------~----~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~-- 289 (476)
T PLN00028 231 KK------------S----GTMPKDSFSKVLRYGVTNY---RTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLET-- 289 (476)
T ss_pred Hh------------c----CccccccHHHHHHHHHcCc---hhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHH--
Confidence 00 0 0000011111122211111 12333333333333334455566666544 3554332
Q ss_pred chhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhh-------HHHHHHHHHHHHHHHHHhhhhcccCCCchHHHH
Q 010212 333 MNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFA-------IQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFV 405 (515)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (515)
+........++.+++++++|+++||++||+ .......+.+++.+++... .+.....
T Consensus 290 ----------a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~-------~~~~~~~ 352 (476)
T PLN00028 290 ----------AGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRA-------NSLGAAI 352 (476)
T ss_pred ----------HHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhccc-------chHHHHH
Confidence 222556667788889999999999998752 1122222222222211111 1112222
Q ss_pred HHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCchHHHHHHHHHHHHHHHHH
Q 010212 406 VLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSGVKKALLILGGANFLGMLFT 485 (515)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~ 485 (515)
....+...+.. ...+..+++..+..| +.+|++.|+.+..+++|++++|.+.+ ..+..+|+..|++.+++.+++.++.
T Consensus 353 ~~~~l~~~~~~-~~~~~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~ 429 (476)
T PLN00028 353 VVMILFSIFVQ-AACGATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPV 429 (476)
T ss_pred HHHHHHHHHHH-HhhhhhcccCcccCh-hhchhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHH
Confidence 22222222221 123345566667655 78999999998888888888887765 2234468899999998888888877
Q ss_pred Hhcc
Q 010212 486 FLVP 489 (515)
Q Consensus 486 ~~~~ 489 (515)
++.+
T Consensus 430 ~~~~ 433 (476)
T PLN00028 430 AFIH 433 (476)
T ss_pred Hhee
Confidence 7554
No 32
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=1.4e-33 Score=274.60 Aligned_cols=390 Identities=15% Similarity=0.181 Sum_probs=269.3
Q ss_pred HHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHH
Q 010212 32 FFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVIC 111 (515)
Q Consensus 32 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~ 111 (515)
++...+++..++...|.+.+++ |.+..+.+++.+++.++..+++++.|+++||+|||+++..+.++.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~----------g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~ 72 (399)
T TIGR00893 3 TVINYLDRANLSFAAPMLQEDL----------GLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVF 72 (399)
T ss_pred ehHHHHHHHhhhHhHHHHHHhh----------CCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHH
Confidence 4566788889999999999999 999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 010212 112 SLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFK 191 (515)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~ 191 (515)
.++++++++ ++.++++|++.|++.+...+....++.|++|+++|++++++......+|.++++.+++.+.
T Consensus 73 ~~~~~~~~~------~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~---- 142 (399)
T TIGR00893 73 TGLQAFAGA------YVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWIL---- 142 (399)
T ss_pred HHHHHHHcC------HHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHH----
Confidence 999999998 8999999999999999999999999999999999999999999999999999999999875
Q ss_pred cCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHH-HHHhcCCchhhHHHHhccHHHHHHHHHHHHHhhhhHhhh
Q 010212 192 ANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYY-WRMKMPETARYTALVAKNAKQAAADMSKVLQVELEAEQE 270 (515)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~-~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (515)
+..+||+.|++.++..++..+ ..++.||+|+.. +..++++.....++.. .+.
T Consensus 143 -------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-----~~~- 195 (399)
T TIGR00893 143 -------------------IHFSWQWAFIIEGVLGIIWGVLWLKFIPDPPQKA--KWLTEEEKYIVVGGLL-----AEQ- 195 (399)
T ss_pred -------------------HhCCchHHHHHHHHHHHHHHHHhhheecCCCCcc--ccCCHHHHhhcchhhc-----ccc-
Confidence 345599999987776665444 445567765431 1111111110000000 000
Q ss_pred hHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhH-hcccCCcccchhHHHHHHHHHHHHHH
Q 010212 271 KVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTA-IGWIPKAKTMNAIEEVYKIARAQTLI 349 (515)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (515)
+ ++++++..++..++...++ .++......+...........+.|.++++ .++++... ......
T Consensus 196 ~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~ 259 (399)
T TIGR00893 196 Q-GKGPSTPKKYQIKELLKDR---RVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEA------------GFMASL 259 (399)
T ss_pred c-cccccCCCccchHHHhcCH---HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHh------------hHHHHH
Confidence 0 0011111111111111111 23334444444455566666677777654 44443322 225556
Q ss_pred HHhhhhhHHHHHHHHHHhhchhhHHH-HHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCcccccccccc
Q 010212 350 ALCSTVPGYWFTVALIDKIGRFAIQL-MGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPA 428 (515)
Q Consensus 350 ~~~~~~~~~~~~g~l~d~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (515)
..++.+++.++.+++.||++||+... .......++.+........... ........... .......+..+..+++..
T Consensus 260 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 337 (399)
T TIGR00893 260 PGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNY-VNIPYAALALV-ALGFFGLGAGAIGWALIS 337 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcc-chhHHHHHHHH-HHHHhchhhhhHHHHHHH
Confidence 66777889999999999999986211 1111111111111111000000 11122222222 222233335678888999
Q ss_pred ccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccC-chHHHHHHHHHHHHHHHHHH
Q 010212 429 EIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSG-VKKALLILGGANFLGMLFTF 486 (515)
Q Consensus 429 ~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g-~~~~~~~~~~~~~~~~~~~~ 486 (515)
|..|++.|++++|+.+.+.++|..++|.+.|.+.|..| +...+.+.+++.+++.+..+
T Consensus 338 ~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 338 DNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYL 396 (399)
T ss_pred hhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999888 88888888888777766554
No 33
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=100.00 E-value=1.6e-40 Score=328.01 Aligned_cols=432 Identities=30% Similarity=0.475 Sum_probs=309.0
Q ss_pred HHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCC-CCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHH
Q 010212 28 AGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSD-SPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLM 106 (515)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~ 106 (515)
..++.+.+++|...++...+.......+..++. .+.+.++.+.++..+...+|..+|+++.|+++||+|||+.++++.+
T Consensus 5 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~ 84 (451)
T PF00083_consen 5 ASLGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISAL 84 (451)
T ss_pred eHHHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhccccccccccccccccccccccccc
Confidence 345668889999888888777664332222221 1122256788999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcC---CCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHH
Q 010212 107 MMVICSLASGLSF---GKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVA 183 (515)
Q Consensus 107 ~~~i~~~~~~~~~---~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~ 183 (515)
+..+++++.++++ + ++.+.++|+++|++.|+..+....++.|..|+++|++..++.+.+..+|.+++..++
T Consensus 85 ~~~i~~~~~~~~~~~~~------~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~ 158 (451)
T PF00083_consen 85 LMIIGSILIAFAPSYNN------FWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIG 158 (451)
T ss_pred ccccccccccccccccc------ccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999 7 799999999999999999999999999999999999999999999999999888887
Q ss_pred HHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhcCCchhhHHHHhccHHHHHHHHHHHHHh
Q 010212 184 IIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKMPETARYTALVAKNAKQAAADMSKVLQV 263 (515)
Q Consensus 184 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~ 263 (515)
..+... ..+.+||+.+.+.++++++.++..+++||||+|+ ..+++.+|+.+.+++..+.
T Consensus 159 ~~~~~~--------------------~~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL-~~~~~~~~A~~~l~~~~~~ 217 (451)
T PF00083_consen 159 YIVSYY--------------------SDNWGWRILLIFGAIPSLLVLLLRFFLPESPRWL-LSKGRDEEAEKVLRKLRGK 217 (451)
T ss_pred cccccc--------------------ccccccccccccccccccccccccccccccccee-ccccccccccccccccccc
Confidence 655211 1235699999999999888777778999999998 4444555666666664333
Q ss_pred hhhHhhh-hHHHhh------cCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccchhH
Q 010212 264 ELEAEQE-KVEQEK------GKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAI 336 (515)
Q Consensus 264 ~~~~~~~-~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (515)
+.++++. +..++. +...++.++.+..++. ......+..+......+....+.+.++++.+.++...
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~----- 290 (451)
T PF00083_consen 218 EIEDEEIEEIKAEKKESQESKASWRDLFRNKKYRKR--LLIALLLQFFQQFSGINFIFYYSPSIFENAGISNSFL----- 290 (451)
T ss_pred ccccccccccccccccccccceeeeecccccccccc--ccccccccccccccccccccccccccccccccccccc-----
Confidence 2211111 111111 1223445554332221 2222222222222333445556666766666555410
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCC--chHHHHHHHHHHHHH
Q 010212 337 EEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPD--HRIGFVVLYSLTFFF 414 (515)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 414 (515)
......+..+++.+++.++.||+|||+.++.+..+++++.+.++.........+ .....+....+....
T Consensus 291 ---------~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~ 361 (451)
T PF00083_consen 291 ---------ATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAF 361 (451)
T ss_pred ---------cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeeeecccc
Confidence 233344556666777789999999999999998888888777751111111111 122333334444445
Q ss_pred hhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHH-hccccCC
Q 010212 415 SNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSGVKKALLILGGANFLGMLFTF-LVPESKG 493 (515)
Q Consensus 415 ~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 493 (515)
...+..+..+.+..|.+|++.|+++.|+...++++++++++.+.+.+.+..+....+.+.+++++++.++.+ ++||||+
T Consensus 362 ~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpET~g 441 (451)
T PF00083_consen 362 FSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPETKG 441 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHHHHHHHhheeEEEeeCCC
Confidence 555677888899999999999999999999999999999999999998877745666677777676666665 8999999
Q ss_pred CChhhhhhh
Q 010212 494 KSLEEMSGE 502 (515)
Q Consensus 494 ~~~~~~~~~ 502 (515)
++.+|.++.
T Consensus 442 ~~l~ei~~~ 450 (451)
T PF00083_consen 442 KTLEEIQEM 450 (451)
T ss_pred CCHHHHHhh
Confidence 999998764
No 34
>PRK10489 enterobactin exporter EntS; Provisional
Probab=100.00 E-value=1.1e-32 Score=268.94 Aligned_cols=381 Identities=10% Similarity=-0.005 Sum_probs=264.9
Q ss_pred HHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHH
Q 010212 33 FTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICS 112 (515)
Q Consensus 33 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~ 112 (515)
+...+......+.+|.+.+++ +.+..+.|++.+.+.++..+++++.|+++||+|||+++..+..+.+++.
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~----------~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~ 96 (417)
T PRK10489 27 FISIFGLGLLGVAVPVQIQMM----------TGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGF 96 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHH----------HCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHH
Confidence 334445566678888888888 8899999999999999999999999999999999999998888887776
Q ss_pred HHhhh-----cCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 010212 113 LASGL-----SFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVS 187 (515)
Q Consensus 113 ~~~~~-----~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~ 187 (515)
+..+. .++ ++.+++.|+++|++.+...+...+++.|++|+++|+++.++.....++|..+|+.+++.+.
T Consensus 97 ~~~~~~~~~~~~~------~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~ 170 (417)
T PRK10489 97 IGLALNAFLPEPS------LLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLI 170 (417)
T ss_pred HHHHHHHHcCCCc------HHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHH
Confidence 65542 334 7889999999999988888888999999999999999999999999999999999999886
Q ss_pred HhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhcCCchhhHHHHhccHHHHHHHHHHHHHhhhhH
Q 010212 188 AAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVELEA 267 (515)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (515)
+. .+|++.|++.++..++..+..+.+||+++.. +++ ++..+..
T Consensus 171 ~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~--~~~~~~~---------- 213 (417)
T PRK10489 171 AA-----------------------GGVAWNYGLAAAGTFITLLPLLRLPALPPPP--QPR--EHPLRSL---------- 213 (417)
T ss_pred HH-----------------------HhhHHHHHHHHHHHHHHHHHHHhCCCCCCCC--ccc--ccchHHH----------
Confidence 43 3499999887777666666666777765421 000 0000000
Q ss_pred hhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhH-hcccCCcccchhHHHHHHHHHHH
Q 010212 268 EQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTA-IGWIPKAKTMNAIEEVYKIARAQ 346 (515)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 346 (515)
.+..+..++++.. +......+ +. ........+.|.+.++ .|.++...+ ..
T Consensus 214 ---------~~~~~~~~~~~~~----~~~~~~~~---~~-~~~~~~~~~~p~~~~~~~g~~~~~~g------------~~ 264 (417)
T PRK10489 214 ---------LAGFRFLLASPVV----GGIALLGG---LL-TMASAVRVLYPALADEVWQMGAAQIG------------LL 264 (417)
T ss_pred ---------HHHHHHHHcChHH----HHHHHHHH---HH-HHHHhHHHhhHHHHHhccCCChhHhH------------HH
Confidence 0000111111111 11111111 11 1123344566777766 555443322 24
Q ss_pred HHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCcccccccc
Q 010212 347 TLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVV 426 (515)
Q Consensus 347 ~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (515)
.....++.+++.++.+++.||.++++.+..+..+..++.+++.... +........+..+.......+...++
T Consensus 265 ~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~g~~~~~~~~~~~~~ 336 (417)
T PRK10489 265 YAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMP--------MWILAVLCLALFGYLSAISSLLQYTL 336 (417)
T ss_pred HHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccc--------hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5556677888899999999997777777777666666655543321 22222222222222222223455678
Q ss_pred ccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCchHHHHHHHHHHHHHHHHH-HhccccCCCChhhhhhhh
Q 010212 427 PAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSGVKKALLILGGANFLGMLFT-FLVPESKGKSLEEMSGEA 503 (515)
Q Consensus 427 ~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 503 (515)
+.|..|++.||+++|+.+...++|..++|.+.|.+.+..|+...+...+++.++..++. ..+++.|+++.+|.+++.
T Consensus 337 ~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (417)
T PRK10489 337 LQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLGELRRFRQTPPEVDA 414 (417)
T ss_pred HHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhcccccccccccccCCC
Confidence 89999999999999999999999999999999999999998888877776655544444 467888877766655543
No 35
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=100.00 E-value=3.3e-33 Score=276.54 Aligned_cols=413 Identities=13% Similarity=0.095 Sum_probs=277.0
Q ss_pred ccchhHHHHHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhcc------------CCCCCCCCCchhHHHHHHHHHHHHHHH
Q 010212 16 KTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYK------------EGSDSPGTLPDNVASAVNGVALCGTLA 83 (515)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~------------~~~~~~~~~s~~~~g~~~s~~~l~~~i 83 (515)
...+.+|.+..+++++....+.|+..++...+.+.++-..+ +....+.+++..+.|++.+.+.+++.+
T Consensus 12 ~~~~~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~ 91 (465)
T TIGR00894 12 YFCSFRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQGLILSSHFYGQII 91 (465)
T ss_pred cccCcHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHhhHHHHHHHHHHHH
Confidence 34567788888999999999999999999988886522100 001114589999999999999999999
Q ss_pred HHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhc--CCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccc
Q 010212 84 GQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLS--FGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTR 161 (515)
Q Consensus 84 ~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~--~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r 161 (515)
++++.|+++||+|||+++..+.++++++.+++.++ .+ ++.+++.|+++|++.+...+....++.||+|+++|
T Consensus 92 ~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r 165 (465)
T TIGR00894 92 IQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGG------IALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKER 165 (465)
T ss_pred HHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcC------chHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHH
Confidence 99999999999999999999999999998887554 44 67899999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCC-chHHHHHHHhHHHHHHHHH-HHHhcCCc
Q 010212 162 GAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEAD-YIWRIILMFGAIPALLTYY-WRMKMPET 239 (515)
Q Consensus 162 ~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~wr~~f~~~~~~~~~~~~-~~~~~~e~ 239 (515)
++++++...+..+|.++++++++.+. +. .+||+.|++.++.+++..+ ...+.+|+
T Consensus 166 ~~~~~~~~~~~~~g~~i~~~l~~~l~-----------------------~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~ 222 (465)
T TIGR00894 166 SRLLGMSTSGFQLGTFIFLPISGWLC-----------------------ESWGGWPMIFYVFGIVGCAWSLLWFVFPADD 222 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------hccCCCCeehhhhhHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999885 33 3699999998777766544 44556677
Q ss_pred hhhHHHHhccHHHHHHHHHHHHHhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhH
Q 010212 240 ARYTALVAKNAKQAAADMSKVLQVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKD 319 (515)
Q Consensus 240 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (515)
|+.. ++.++ ++.+..++ .. ++ + +++.+.+..++....++ .++...+..++....++....+.|.
T Consensus 223 p~~~--~~~~~-~~~~~i~~----~~----~~-~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~lp~ 286 (465)
T TIGR00894 223 PSIH--PCISK-FEKKYINS----SL----QG-Q-KGSTRQSLPIKAIPKSL---PVWAIWFAIFGHFWLYTILPTYLPT 286 (465)
T ss_pred cccC--CCCCH-HHHHHHHh----hc----cc-c-cCCCCCCCCHHHHhcCH---HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6531 11111 11111110 00 00 0 00001111122222222 3455556666666677777888898
Q ss_pred HHhH-hcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHH--------HHHHHHHHHHHHHHHh
Q 010212 320 IFTA-IGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQ--------LMGFFFMTVFMFALAI 390 (515)
Q Consensus 320 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~--------~~~~~~~~~~~~~~~~ 390 (515)
++++ .|++....+ .......++.+++.+++|+++||+++|+.. ..+......+..++..
T Consensus 287 ~l~~~~g~s~~~~g------------~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (465)
T TIGR00894 287 FISWVLRVSGKENG------------LLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYAL 354 (465)
T ss_pred HHHHHhCcChHHhH------------HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8865 455443322 244555677788889999999997654211 1111111111111111
Q ss_pred hhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhcc---Cc
Q 010212 391 PYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTS---GV 467 (515)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~---g~ 467 (515)
.. . .......+....+.. ....+..+..+....|..| +.+|.++|+.+..+.++++++|.+.|.+.+.. +|
T Consensus 355 ~~--~--~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~ 428 (465)
T TIGR00894 355 PY--L--SAAFYLTIIILTLAN-AVSSGPLAGVLINSLDLAP-RFLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVW 428 (465)
T ss_pred HH--c--CCchHHHHHHHHHHH-HHhhhhhhhhhhchhhcCh-hHHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHH
Confidence 11 0 111222222222222 2222223334455567776 58999999999999999999999999988743 37
Q ss_pred hHHHHHHHHHHHHHHHHHHhcccc
Q 010212 468 KKALLILGGANFLGMLFTFLVPES 491 (515)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~ 491 (515)
...|.+.+++.+++.++.....+.
T Consensus 429 ~~~f~~~~~~~~i~~i~~~~~~~~ 452 (465)
T TIGR00894 429 LIVFLIMAFVNILCVIFYLIFGSA 452 (465)
T ss_pred HHHHHHHHHHHHHHHHHeeeeecc
Confidence 788888888888877666554443
No 36
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=100.00 E-value=8.1e-34 Score=278.42 Aligned_cols=400 Identities=12% Similarity=0.056 Sum_probs=265.3
Q ss_pred ccchhHHHHHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 010212 16 KTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKM 95 (515)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~ 95 (515)
+...++|.++..+++.......+...++...|.+.+++ |.+.++.+++.+.+.++..++.++.|+++||+
T Consensus 12 ~~~~~~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~----------g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~ 81 (455)
T TIGR00892 12 PDGGWGWVVLGATFVSIGFSYAFPKAVTVFFKELQQIF----------QATYSETAWISSIMLAVLYAGGPISSILVNRF 81 (455)
T ss_pred CCCCcchHHHHHHHHHHHHHHhhhcchhhhHHHHHHHh----------CcchhHHHHHHHHHHHHHHHhhHHHHHHHHHc
Confidence 34456788877777776666666677888899999999 99999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHH-HHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHH
Q 010212 96 GRKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCF-FRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGF 174 (515)
Q Consensus 96 Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~-~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~ 174 (515)
|||++++.+.++.++++++++++++ ++.+++ .|+++|++.+...+...+++.++++ ++|+++.++.+.+..+
T Consensus 82 g~r~~l~~~~~~~~~~~~~~~~~~~------~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~ 154 (455)
T TIGR00892 82 GCRPVVIAGGLLASLGMILASFSSN------VIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPV 154 (455)
T ss_pred CchHHHHhhHHHHHHHHHHHHHhhh------HHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccH
Confidence 9999999999999999999999988 677654 5799999998877788888999996 7899999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhcCCchhhHHHHhccHHHHH
Q 010212 175 GILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKMPETARYTALVAKNAKQAA 254 (515)
Q Consensus 175 G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~ 254 (515)
|..++|++++.+.+ ..|||+.|++.++..++..+..+++.+.++. . ++.+++..
T Consensus 155 g~~~~~~l~~~l~~-----------------------~~gwr~~f~~~~~~~~~~~v~~~~~~~~~~~--~-~~~~~~~~ 208 (455)
T TIGR00892 155 FLSTLAPLNQYLFE-----------------------SFGWRGSFLILGGLLLHCCVCGALMRPVGPS--Q-RVSKSKSK 208 (455)
T ss_pred HHHHHHHHHHHHHH-----------------------HhChHHHHHHHHHHHHHHHHHHHHhCCCCcc--c-cccccccc
Confidence 99999999988864 3459999999877766554444333322211 0 00000000
Q ss_pred HHHHHHHHhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccch
Q 010212 255 ADMSKVLQVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMN 334 (515)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (515)
+... +....++.+. + ....+..+....+..++ +.++......+.....++....+.+.+.++.++++...+
T Consensus 209 ~~~~---~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g~s~~~~g-- 279 (455)
T TIGR00892 209 EGLP---PDGSTKKLSK-K-STAEKINRFLDFSLFTH--RGFLVYLSGNVIMFLGFFAPIIFLVPYAKDKGVDEYEAA-- 279 (455)
T ss_pred ccCC---CCCccccccc-c-chhhhhhhhcchHHhcC--chHHHHHHHHHHHHHHccchHHHHHHHHHHcCCCHHHHH--
Confidence 0000 0000000000 0 00000001000011111 122333333344444555666677777777666544322
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhh--chhhHHHHHH--HHHHHHHHHHHhhhhcccCCCchHHHHHHHHH
Q 010212 335 AIEEVYKIARAQTLIALCSTVPGYWFTVALIDKI--GRFAIQLMGF--FFMTVFMFALAIPYHHWTLPDHRIGFVVLYSL 410 (515)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~--g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (515)
.......++.+++.++.+++.||. ++|+...... .+.+++.++.... .....+.+..+
T Consensus 280 ----------~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~--------~~~~~~~i~~~ 341 (455)
T TIGR00892 280 ----------FLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALA--------GDYTGLVIYCI 341 (455)
T ss_pred ----------HHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHh--------chHHHHHHHHH
Confidence 245556677788888999999973 3343333322 2222222222211 12223333333
Q ss_pred HHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhcc-CchHHHHHHHHHHHHHHHHH
Q 010212 411 TFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTS-GVKKALLILGGANFLGMLFT 485 (515)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~-g~~~~~~~~~~~~~~~~~~~ 485 (515)
..++......+...+++.|.+|++++++++|+++...++|.+++|.+.|.+.|.. +|+..|++.+++.+++.+..
T Consensus 342 ~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~~~ 417 (455)
T TIGR00892 342 FFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGLFL 417 (455)
T ss_pred HHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHHHH
Confidence 4444444445666788889999999999999999999999999999999999877 48888888887777665543
No 37
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=1.5e-32 Score=272.61 Aligned_cols=380 Identities=16% Similarity=0.109 Sum_probs=268.7
Q ss_pred hHHHHHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhh
Q 010212 20 YHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKR 99 (515)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~ 99 (515)
++|.++..++++.++...|.++++..+|.+.+++ |.+.++.+|+.+.+.++..++.+++|+++||+|||+
T Consensus 3 ~~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l----------~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~ 72 (495)
T PRK14995 3 RQWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTL----------GASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKR 72 (495)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------CCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 3577888999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhcc-ccccchhHHHHHHHHHHHHHHH
Q 010212 100 VYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYA-NKKTRGAFIAAVFAMQGFGILS 178 (515)
Q Consensus 100 ~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~-~~~~r~~~~~~~~~~~~~G~~~ 178 (515)
+++.+.+++.+++++++++++ ++.++++|+++|++.+...+.....+.+++ |+++|+++++++.....+|..+
T Consensus 73 ~l~~~~~~~~~~~~~~~~a~~------~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~ 146 (495)
T PRK14995 73 LLMLGGTLFGLASLAAAFSPT------ASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAF 146 (495)
T ss_pred HHHHHHHHHHHHHHHHHHcCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999 899999999999999998888888887776 6789999999999999999999
Q ss_pred HHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHH-HHHHHhcCCchhhHHHHhccHHHHHHHH
Q 010212 179 GGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLT-YYWRMKMPETARYTALVAKNAKQAAADM 257 (515)
Q Consensus 179 g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~-~~~~~~~~e~p~~~~~~~~~~~~~~~~~ 257 (515)
||.+++.+. +..+||+.|++....+++. ++..+++||+|+.. .++.+........
T Consensus 147 gp~lgg~l~-----------------------~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~-~~~~d~~g~~~~~ 202 (495)
T PRK14995 147 GPLVGGILL-----------------------EHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRR-DQPLNLGHALMLI 202 (495)
T ss_pred HHHHHHHhh-----------------------ccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCC-CCCCChHhHHHHH
Confidence 999999995 4456999999976666554 34456678765421 0111111100000
Q ss_pred HH----HHHhh-hhHhh--------------------hhHHHhhcCC--cchhhhhhhhhhhhHHHHHHHHHHHHHHHHH
Q 010212 258 SK----VLQVE-LEAEQ--------------------EKVEQEKGKN--DFGLFSAKFVRRHGLHLIGTTVTWFLLDVAY 310 (515)
Q Consensus 258 ~~----~~~~~-~~~~~--------------------~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (515)
.. ....+ ..... ...+.+.+.+ ..+.++++ .+.......+......
T Consensus 203 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~e~~~~~p~~~~~lf~~~-------~~~~~~~~~~~~~~~~ 275 (495)
T PRK14995 203 VAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFIRTQLAASRPMIDMRLFTHR-------IILSGVVMAMTAMITL 275 (495)
T ss_pred HHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHhCCc-------ccHHHHHHHHHHHHHH
Confidence 00 00000 00000 0000011111 12222222 1222223333333445
Q ss_pred HHHhhhhhHHHhH-hcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHH
Q 010212 311 YSQNLFQKDIFTA-IGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALA 389 (515)
Q Consensus 311 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~ 389 (515)
+....+.|.+++. .|+++.+. .....+..++..++.++.|++.||+|+|+.+..+..+..++.+++.
T Consensus 276 ~~~~~~~~~~lq~v~g~s~~~a------------g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~ 343 (495)
T PRK14995 276 VGFELLMAQELQFVHGLSPLEA------------GMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLA 343 (495)
T ss_pred HHHHHHHHHHHHHHcCCCHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHH
Confidence 5566677777765 46655442 2266667778888999999999999999988888777766665554
Q ss_pred hhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhh
Q 010212 390 IPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLAD 463 (515)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~ 463 (515)
... ...+.+.... ..+..++......+.....+.+..|+++++.+.++.++..++|+.+|+.+.+.+.+
T Consensus 344 ~~~----~~~~~~~~~~-~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 344 MTD----FSTQQWQAWG-LMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred Hhc----CCCchHHHHH-HHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 322 1112222222 22222222222334455666788999999999999999999999999999998875
No 38
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=1.3e-31 Score=258.18 Aligned_cols=369 Identities=13% Similarity=0.128 Sum_probs=255.8
Q ss_pred hhHHHHHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhh
Q 010212 19 WYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRK 98 (515)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr 98 (515)
+..|+.+..+.++.+..........+.+|.+.+++ |.++++.++..+.+.++..+++++.|+++||+|||
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----------g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr 85 (394)
T PRK10213 16 RPNWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDL----------GISEGVAGQSVTVTAFVAMFASLFITQTIQATDRR 85 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcH
Confidence 34566666666665555556566667889999999 99999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHH
Q 010212 99 RVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILS 178 (515)
Q Consensus 99 ~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~ 178 (515)
+++..+.++.+++.++++++++ ++.+++.|+++|++.+...+...+++.|++|+++|+++.++...+.++|..+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~i 159 (394)
T PRK10213 86 YVVILFAVLLTLSCLLVSFANS------FSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVI 159 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHCh------HHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988 8999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHH-HHhcCCchhhHHHHhccHHHHHHHH
Q 010212 179 GGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYW-RMKMPETARYTALVAKNAKQAAADM 257 (515)
Q Consensus 179 g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~-~~~~~e~p~~~~~~~~~~~~~~~~~ 257 (515)
+|++++.+. +..+||+.|++.++.+++..+. ....||+|++. ++. +
T Consensus 160 g~~l~~~l~-----------------------~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~~~~---~~~-~------ 206 (394)
T PRK10213 160 AAPLGSFLG-----------------------ELIGWRNVFNAAAVMGVLCIFWIIKSLPSLPGEP---SHQ-K------ 206 (394)
T ss_pred HHHHHHHHH-----------------------hhcCHHHHHHHHHHHHHHHHHHHHHHCCCCCccc---ccc-h------
Confidence 999999985 3456999999977666554433 34467754320 000 0
Q ss_pred HHHHHhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhh-hhHHHhHhcccCCcccchhH
Q 010212 258 SKVLQVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLF-QKDIFTAIGWIPKAKTMNAI 336 (515)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 336 (515)
++.++.++++. ++......+......+....+ .|.+.++.|+++...+
T Consensus 207 --------------------~~~~~~l~~~~-------~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g---- 255 (394)
T PRK10213 207 --------------------QNTFRLLQRPG-------VMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLT---- 255 (394)
T ss_pred --------------------hHHHHHhcCHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHH----
Confidence 00111122111 121212222222233333334 4666666676654322
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhh
Q 010212 337 EEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSN 416 (515)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (515)
.......++.+++.++.+++.||.+ |+.+..+..+..++.+++.... ...+ .+....+..++..
T Consensus 256 --------~~~~~~~~~~iig~~~~~~l~~r~~-~~~l~~~~~~~~~~~~~l~~~~------~~~~-~~~~~~~l~G~~~ 319 (394)
T PRK10213 256 --------LVLLSFGIASFVGTSLSSFILKRSV-KLALAGAPLVLAVSALVLTLWG------SDKI-VATGVAIIWGLTF 319 (394)
T ss_pred --------HHHHHHHHHHHHHHHHHHHHHhccc-hhHHHHHHHHHHHHHHHHHHHh------hhHH-HHHHHHHHHHHHH
Confidence 1455566778888899999999954 4443433333333322222211 1122 2222333333333
Q ss_pred cCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCchHHHHHHHHHHHHHHHH
Q 010212 417 FGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSGVKKALLILGGANFLGMLF 484 (515)
Q Consensus 417 ~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~ 484 (515)
....+...+.+.+..| +.+++..++.....++|..+|+.+.|.+.|..|+...+...+++.++..+.
T Consensus 320 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~ 386 (394)
T PRK10213 320 ALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLTALL 386 (394)
T ss_pred HhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHHHHH
Confidence 3334545556677777 556677788888889999999999999999999888887776665554443
No 39
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=100.00 E-value=2.5e-32 Score=267.55 Aligned_cols=410 Identities=13% Similarity=0.140 Sum_probs=267.0
Q ss_pred hHHHHHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhh
Q 010212 20 YHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKR 99 (515)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~ 99 (515)
.++..+..+.+.+...+.++..+....|.+. +. |.+.++.+++.+++.++..+++++.|+++||+|||+
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~----------g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~ 92 (438)
T TIGR00712 24 LRWQVFLGIFFGYAAYYLVRKNFALAMPYLV-EQ----------GFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRV 92 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhccHHhhhHHHH-Hc----------CCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCce
Confidence 3566667777777888888877787888776 46 899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHH
Q 010212 100 VYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSG 179 (515)
Q Consensus 100 ~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g 179 (515)
++..+.++.+++.++.++.++. ..+++.+++.|++.|++.+...+.....+.|++|+++|++++++.+.+.++|..++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~ 170 (438)
T TIGR00712 93 FLPAGLILSAAVMLLMGFVPWA--TSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIP 170 (438)
T ss_pred ehHHHHHHHHHHHHHHhccccc--cchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHH
Confidence 9999999999998887765321 01167888999999999999889899999999999999999999999999999998
Q ss_pred HHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHH-HHHHHHhcCCchhhHHHHhccHHHHHHHHH
Q 010212 180 GMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALL-TYYWRMKMPETARYTALVAKNAKQAAADMS 258 (515)
Q Consensus 180 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~-~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~ 258 (515)
+.+.+.... ...+||..|++.++..++ .++..+++||+|+.. ..++.++..+
T Consensus 171 ~~l~~~~~~----------------------~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~--- 223 (438)
T TIGR00712 171 PLLVLLGMA----------------------WFNDWHAALYFPAICAIIVALFAFAMMRDTPQSC--GLPPIEEYRN--- 223 (438)
T ss_pred HHHHHHHHH----------------------HhhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhc--CCCCchhccc---
Confidence 887665432 224599999997777665 445566778876541 1001000000
Q ss_pred HHHHhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhH-hcccCCcccchhHH
Q 010212 259 KVLQVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTA-IGWIPKAKTMNAIE 337 (515)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 337 (515)
+.+.+..+ +.+++.+.++.+.+...+. +.++...+..++.....+....+.|.++++ .|+++...
T Consensus 224 -----~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~------ 289 (438)
T TIGR00712 224 -----DYPDDYNE-KAEQELTAKEIFMQYVLPN--KLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKS------ 289 (438)
T ss_pred -----cccccccc-ccccccchHHHHHHHHccC--chHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhH------
Confidence 00000000 0000111112221111111 123333344444445556677788888876 35554432
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhc
Q 010212 338 EVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNF 417 (515)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (515)
........+..+++.++++++.||+++++....+.....+..+...... .. ...+.+... ...+..+....
T Consensus 290 ------~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~-~~~~~~g~~~~ 360 (438)
T TIGR00712 290 ------SWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYW-MN-PAGNPLVDM-ICMIVIGFLIY 360 (438)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHH-hc-CCCchHHHH-HHHHHHHHHHc
Confidence 2245566677888999999999999654322223222221111111100 00 001112111 11122222222
Q ss_pred CccccccccccccCchhhhhhhhHHHHHHhhhhH-HHHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHH-hccccC
Q 010212 418 GPNTTTFVVPAEIFPARLRSTCHGISAASGKAGA-IVGAFGFLYLADTSGVKKALLILGGANFLGMLFTF-LVPESK 492 (515)
Q Consensus 418 ~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~-~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~ 492 (515)
+..........|.+|++.|++++|+.+...++++ +++|.+.|.+.|..||..++.+..++.+++.+..+ +.+|.|
T Consensus 361 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (438)
T TIGR00712 361 GPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEK 437 (438)
T ss_pred cHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 2212222456799999999999999999988875 68999999999999999999888887777777666 555544
No 40
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-31 Score=242.69 Aligned_cols=393 Identities=15% Similarity=0.215 Sum_probs=300.4
Q ss_pred ccchhHHHHHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 010212 16 KTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKM 95 (515)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~ 95 (515)
..++.+.+.+.+..+......+.+.+++++.+.+.+++ ++|+.|.+++.++..+..++..++.|.+.||+
T Consensus 7 ~~k~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~----------~LS~~q~~ll~aiPil~GallRl~~g~l~drf 76 (417)
T COG2223 7 RGKRIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDF----------GLSEGQKGLLVAIPILVGALLRLPYGFLTDRF 76 (417)
T ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc----------CCCHHHHHHHHHHHHHHhHHHHHHHHhhhccc
Confidence 34455667778888888888888999999999999999 99999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHH
Q 010212 96 GRKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFG 175 (515)
Q Consensus 96 Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G 175 (515)
|.|++..++.++..+.++..+++.++++ ++++++++++.|++ |..+.+...++++|+|++++|.++|++. ..++|
T Consensus 77 GgR~~~~~s~~l~~IP~~~~~~a~~~~~---~~~ll~~gll~G~~-GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G 151 (417)
T COG2223 77 GGRKWTILSMLLLLIPCLGLAFAVTYPS---TWQLLVIGLLLGLA-GASFAVGMPNASFFFPKEKQGLALGIAG-AGNLG 151 (417)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHccCCc---hHHHHHHHHHHhcc-cceehcccccccccCChhhhhHHHHHhc-ccccc
Confidence 9999999999999999999999987422 46999999999997 5668999999999999999999999999 89999
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHH-HHHHHHhcCCchhhHHHHhccHHHHH
Q 010212 176 ILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALL-TYYWRMKMPETARYTALVAKNAKQAA 254 (515)
Q Consensus 176 ~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~-~~~~~~~~~e~p~~~~~~~~~~~~~~ 254 (515)
..+...++..+....+. ..||....+..+..++ .+..++...|.|+. ..+.++.+.
T Consensus 152 ~av~q~~~P~v~~~~g~--------------------~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~--r~~~~~~~~- 208 (417)
T COG2223 152 VAVAQLVAPLVAVAFGF--------------------LAWRNVAGIYVVALAIAAVLAWLGMNDVPEH--RASVKPQLP- 208 (417)
T ss_pred HHHHHHHHHHHHHHHhh--------------------HHHHHHHHHHHHHHHHHHHHHHHHhCCChhh--hccccccch-
Confidence 99999999888754331 0299988886666665 45556667777653 111110000
Q ss_pred HHHHHHHHhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhH-hcccCCcccc
Q 010212 255 ADMSKVLQVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTA-IGWIPKAKTM 333 (515)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 333 (515)
..++....++ ..|.+.+.++.....+.+...+.|.++++ ++.++...+
T Consensus 209 ---------------------------~~~~~v~~~~---~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag- 257 (417)
T COG2223 209 ---------------------------AQLKAVFSNK---DTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAG- 257 (417)
T ss_pred ---------------------------hHHHHHhcCc---chHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHH-
Confidence 1111222122 34566666666666777788888888876 555554422
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHH
Q 010212 334 NAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFF 413 (515)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (515)
...........+.++++|+++||+|.+|.+...+..++++..++...........+.......+.....
T Consensus 258 -----------~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~ 326 (417)
T COG2223 258 -----------LIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFV 326 (417)
T ss_pred -----------HHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHH
Confidence 255555666677899999999999999999999999998888877654222111223333443444444
Q ss_pred HhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccC-chHHHHHHHHHHHHHHHHHHhccc
Q 010212 414 FSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSG-VKKALLILGGANFLGMLFTFLVPE 490 (515)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~ 490 (515)
+.+.+ +...+.++..++| ++.|.+.|+...++.+|++.-|...+...+..| +...|+++..+.+++.+..+....
T Consensus 327 ~~G~G-nGsvfk~Ip~if~-~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y~ 402 (417)
T COG2223 327 FAGLG-NGSVFKMIPVIFP-KETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWALYA 402 (417)
T ss_pred HhccC-cchheeechHHHH-hhhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444 4456677888887 578999999999999999999999999999888 888999999999988887774433
No 41
>PRK12382 putative transporter; Provisional
Probab=100.00 E-value=6e-32 Score=261.78 Aligned_cols=367 Identities=15% Similarity=0.068 Sum_probs=251.3
Q ss_pred HHHHHHhHHHHHHhhhHHHHHHhh-hhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHH
Q 010212 25 IVIAGMGFFTDAYDLFCISLVTKL-LGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGM 103 (515)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~ 103 (515)
+..+.++.+..........+.+|. +.+++ |.|.++.|++.+++.+++.++++++|+++||+||||+++.
T Consensus 17 ~~~~~~~~~~~~~~~~~~~p~l~~~l~~~l----------g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~ 86 (392)
T PRK12382 17 LFRIAFAVFLTYMTVGLPLPVIPLFVHHDL----------GFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQ 86 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHHHhc----------CCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHH
Confidence 344444555556666677777775 57888 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhh---hcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHH
Q 010212 104 TLMMMVICSLASG---LSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGG 180 (515)
Q Consensus 104 ~~~~~~i~~~~~~---~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~ 180 (515)
+.++..++.+... ..+.. ...+++.++++|+++|++.+...+...+++.|++|+++|++++++.+.+..+|..+||
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~ 165 (392)
T PRK12382 87 GMLACGLAGLAYLLAAILPVS-APFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGA 165 (392)
T ss_pred HHHHHHHHHHHHHhhhccccc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHH
Confidence 9888777655332 22110 0112788999999999999988888899999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhcCCchhhHHHHhccHHHHHHHHHHH
Q 010212 181 MVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKMPETARYTALVAKNAKQAAADMSKV 260 (515)
Q Consensus 181 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~ 260 (515)
++++.+. +..|||+.+.+..+..++........||.++. +++
T Consensus 166 ~~~~~l~-----------------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~----------- 207 (392)
T PRK12382 166 PLGLLLH-----------------------SHFGFAALALTTMVLPLLAWAFNGTVRKVPAH----AGE----------- 207 (392)
T ss_pred HHHHHHH-----------------------hccChHHHHHHHHHHHHHHHHHHHhccCCCCC----ccc-----------
Confidence 9999885 34569988776555443333322223332211 000
Q ss_pred HHhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccchhHHHHH
Q 010212 261 LQVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEVY 340 (515)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (515)
+.+.++..+.. .+. .. ..............+.+.++++.++...
T Consensus 208 ----------------~~~~~~~~~~~-~~~----~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~----------- 251 (392)
T PRK12382 208 ----------------RPSLWSVVGLI-WKP----GL----GLALQGVGFAVIGTFVSLYFASKGWAMA----------- 251 (392)
T ss_pred ----------------CchHHHHHHHH-HHh----HH----HHHHHHHHHhHHHHHHHHHHHhcCCchh-----------
Confidence 00001111100 000 01 1111122333344455556555444211
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCcc
Q 010212 341 KIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPN 420 (515)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (515)
+ .......++.+++.+..+++.||+|+|+.+..+..+..++.+++.... +.+.... ..+..+.......
T Consensus 252 --~-~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~-~~~l~g~~~~~~~ 320 (392)
T PRK12382 252 --G-FTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAP-------TAWVALA-GAALTGAGCSLIF 320 (392)
T ss_pred --H-HHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcc-------cHHHHHH-HHHHHHHHHHhHH
Confidence 1 123345556677888999999999999998888777777665544322 1222222 2222223222234
Q ss_pred ccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHHh
Q 010212 421 TTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSGVKKALLILGGANFLGMLFTFL 487 (515)
Q Consensus 421 ~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 487 (515)
+...+...|..|+++|+++.|+.+...++|..++|.+.|.+.|..||+..|.+.+++.+++.+..++
T Consensus 321 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 321 PALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTIL 387 (392)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHh
Confidence 5555667888999999999999999999999999999999999999999999998888877776653
No 42
>PRK10504 putative transporter; Provisional
Probab=100.00 E-value=1.9e-31 Score=264.69 Aligned_cols=383 Identities=13% Similarity=0.093 Sum_probs=258.2
Q ss_pred HHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHH
Q 010212 24 AIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGM 103 (515)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~ 103 (515)
.+..++++.+...++...+++..|.+.+++ |.+..+.+++.+.+.++..++.+++|+++||+|||++++.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~----------g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~ 80 (471)
T PRK10504 11 QLWIVAFGFFMQSLDTTIVNTALPSMAQSL----------GESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFT 80 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHh----------CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHH
Confidence 345666778888899999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHH
Q 010212 104 TLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVA 183 (515)
Q Consensus 104 ~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~ 183 (515)
+..+.+++.++++++++ ++.+++.|+++|++.+...+...+++.|++|+++|+++.++.....++|..+||.++
T Consensus 81 ~~~~~~~~~~~~~~~~~------~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 154 (471)
T PRK10504 81 AIVLFTLGSLFCALSGT------LNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALG 154 (471)
T ss_pred HHHHHHHHHHHHHHhCC------HHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 99999999999999888 899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHH-HHhcCCchhhHHHHhccHHHHHHHHH----
Q 010212 184 IIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYW-RMKMPETARYTALVAKNAKQAAADMS---- 258 (515)
Q Consensus 184 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~-~~~~~e~p~~~~~~~~~~~~~~~~~~---- 258 (515)
+.+.+ ..+||+.|++.....++..+. ....|+.+.. ..+.+.........
T Consensus 155 g~l~~-----------------------~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~--~~r~~~~~~~~~~~~~~~ 209 (471)
T PRK10504 155 GLLVE-----------------------YASWHWIFLINIPVGIIGAIATLMLMPNYTMQ--TRRFDLSGFLLLAVGMAT 209 (471)
T ss_pred HHHHh-----------------------hccHHHHHHHHHHHHHHHHHHHHHhCCCcccc--CCCCChHHHHHHHHHHHH
Confidence 99863 356999999977665554433 3444544321 00001000000000
Q ss_pred HHHHhhhhHh--------------------hhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhh
Q 010212 259 KVLQVELEAE--------------------QEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQK 318 (515)
Q Consensus 259 ~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (515)
.....+..+. ....++++ ..++.+..+.++++ .+.......++..........+.|
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~--~~~~~l~~~~~~~~~~~~~~~~~~ 285 (471)
T PRK10504 210 LTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARN--NNRALFSLKLFRTR--TFSLGLAGSFAGRIGSGMLPFMTP 285 (471)
T ss_pred HHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhc--CCCCccCHHHhccc--chHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000000000 00000011 11111111111111 112222222233334444555667
Q ss_pred HHHhH-hcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccC
Q 010212 319 DIFTA-IGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTL 397 (515)
Q Consensus 319 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (515)
.+++. .|.++.. .........++.+++.++.+++.||+|||+.+..+..+..+...++.... .
T Consensus 286 ~~~~~~~g~~~~~------------~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~----~ 349 (471)
T PRK10504 286 VFLQIGLGFSPFH------------AGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVA----L 349 (471)
T ss_pred HHHHHHcCCCHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhcc----c
Confidence 77664 4544332 22245566666777778899999999999998888777776655554322 1
Q ss_pred CCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCch
Q 010212 398 PDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSGVK 468 (515)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~ 468 (515)
...........+..+.......+.......+..|++.++.++|+.++...+|..+++.+.|.+.+..|+.
T Consensus 350 -~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~g~~ 419 (471)
T PRK10504 350 -LGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLFGQQ 419 (471)
T ss_pred -cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 1112212122222222222223445567778899999999999999999999999999999998876653
No 43
>PRK10091 MFS transport protein AraJ; Provisional
Probab=100.00 E-value=8.9e-32 Score=259.09 Aligned_cols=367 Identities=13% Similarity=0.117 Sum_probs=255.8
Q ss_pred HHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHH
Q 010212 24 AIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGM 103 (515)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~ 103 (515)
.+....+..+..+.......+.+|.+.+|+ |.+.++.|++.+.+.+++.++++++|+++||+|||+++..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----------g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 73 (382)
T PRK10091 4 VILSLALGTFGLGMAEFGIMGVLTELAHDV----------GISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLF 73 (382)
T ss_pred hHHHHHHHHHHHHhhHHHHHhChHHHHHHc----------CCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHH
Confidence 344555667777888888889999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHH
Q 010212 104 TLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVA 183 (515)
Q Consensus 104 ~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~ 183 (515)
+..+.+++.++++++++ ++.+++.|+++|++.+...+....++.|++|+++|++++++...+..+|..++++++
T Consensus 74 ~~~~~~~~~~l~~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~ 147 (382)
T PRK10091 74 LVALCVIGNAMFTLSSS------YLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLG 147 (382)
T ss_pred HHHHHHHHHHHHHHhCc------HHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHH
Confidence 99999999999999998 899999999999999988888889999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHH-HHHHhcCCchhhHHHHhccHHHHHHHHHHHHH
Q 010212 184 IIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTY-YWRMKMPETARYTALVAKNAKQAAADMSKVLQ 262 (515)
Q Consensus 184 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~-~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~ 262 (515)
+.+. +..+||+.|++.++..++.. ...+++||.++. .+++.++
T Consensus 148 ~~l~-----------------------~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~~~---~~~~~~~---------- 191 (382)
T PRK10091 148 TYLS-----------------------QEFSWRYTFLLIAVFNIAVLASIYFWVPDIRDE---AKGGLRE---------- 191 (382)
T ss_pred HHHh-----------------------hhccHHHHHHHHHHHHHHHHHHHHHhCCCCCcc---cccCHHH----------
Confidence 8885 34569999999777665543 344567875421 0000000
Q ss_pred hhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHh-HhcccCCcccchhHHHHHH
Q 010212 263 VELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFT-AIGWIPKAKTMNAIEEVYK 341 (515)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 341 (515)
..+.++++. .+......+......+....+.+.++. ..|+++..
T Consensus 192 -----------------~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~----------- 236 (382)
T PRK10091 192 -----------------QFHFLRSPA-------PWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETS----------- 236 (382)
T ss_pred -----------------HHHHhcChH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH-----------
Confidence 000111111 111111111211222222233333443 34555443
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccc
Q 010212 342 IARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNT 421 (515)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (515)
.........++.+++.++.+++.||+++|+.+..+..+..++.+++.... +..+.......+.. ....+..+
T Consensus 237 -~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~------~~~~~~~~~~~~~~-~g~~~~~~ 308 (382)
T PRK10091 237 -MTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFG------GMKTASLIFAFICC-AGLFALSA 308 (382)
T ss_pred -HHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHH------hhHHHHHHHHHHHH-HHHHhhhH
Confidence 22256667778889999999999999999998888777776665443322 01122222222221 11111222
Q ss_pred -cccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhc-cCchHHHHHHHHHHHHHHHHHHh
Q 010212 422 -TTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADT-SGVKKALLILGGANFLGMLFTFL 487 (515)
Q Consensus 422 -~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~-~g~~~~~~~~~~~~~~~~~~~~~ 487 (515)
.......+..|++.++.+ ..+...++|.++||.+.|.+.|. .+|+..+.+.++++++.......
T Consensus 309 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (382)
T PRK10091 309 PLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLL 374 (382)
T ss_pred HHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHH
Confidence 222333444555555554 34667889999999999999995 67988888887777766665553
No 44
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=100.00 E-value=1.1e-30 Score=248.73 Aligned_cols=392 Identities=15% Similarity=0.119 Sum_probs=274.5
Q ss_pred hhHHHHHHHHHHhHHHHHHhhhHHHHHHhhhhh-hhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhh
Q 010212 19 WYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGR-IYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGR 97 (515)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Gr 97 (515)
+-.++.+.+..++.+........++++.+.+.+ ++ ++|.+|.+++.+++.+++.++.++.|++.||+|.
T Consensus 30 ~~a~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~----------~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~ 99 (462)
T PRK15034 30 HIARRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGF----------NFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGG 99 (462)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 345677888888888889999999999999876 78 9999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHhhhc-----CCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHH
Q 010212 98 KRVYGMTLMMMVICSLASGLS-----FGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQ 172 (515)
Q Consensus 98 r~~l~~~~~~~~i~~~~~~~~-----~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~ 172 (515)
|+++.++.+++++.+++.+++ ++ ++.+++.|++.|++ +..++.....+++|+|+++||+++|+.....
T Consensus 100 R~v~~~~~ll~~i~~~~~~~a~~~~~~s------~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G 172 (462)
T PRK15034 100 RRWTVFSTAILIIPCVWLGIAVQNPNTP------FGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLG 172 (462)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHcccCCC------HHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHH
Confidence 999999999999999999986 56 89999999999998 7788999999999999999999999998777
Q ss_pred HHHHHHHHHHHHHHH-----HhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHH-hcCCchhhHHHH
Q 010212 173 GFGILSGGMVAIIVS-----AAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRM-KMPETARYTALV 246 (515)
Q Consensus 173 ~~G~~~g~~l~~~l~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~-~~~e~p~~~~~~ 246 (515)
++|..+++++...+. ...+..... ....+..+||.+.++.+++.++..++.+ +.+|.|+.
T Consensus 173 ~~G~~l~~~l~p~~i~~~l~~~~G~~~~~----------~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~~---- 238 (462)
T PRK15034 173 NLGVSVMQLVAPLVIFVPVFAFLGVNGVP----------QADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIASS---- 238 (462)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhcccccc----------ccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCcccc----
Confidence 788877776665543 222210000 0001356699998887776666554444 34443211
Q ss_pred hccHHHHHHHHHHHHHhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhHhcc
Q 010212 247 AKNAKQAAADMSKVLQVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTAIGW 326 (515)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (515)
+.+.++. .+.+|++ ..|...+.+++....+.+...+.|.+.++ .+
T Consensus 239 ~~~~~~~---------------------------~~vlk~~-------~~Wllslly~~tFG~fvg~s~~lp~~~~~-~~ 283 (462)
T PRK15034 239 RASIADQ---------------------------LPVLQRL-------HLWLLSLLYLATFGSFIGFSAGFAMLAKT-QF 283 (462)
T ss_pred ccCHHHH---------------------------HHHhCCC-------chhHHHHHHHHHHHHHHHHHHHHHHHHHH-Hc
Confidence 0110100 0111211 23555555566656666677778877665 22
Q ss_pred cCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHH
Q 010212 327 IPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVV 406 (515)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (515)
... ..........+...+.++++|+++||+|+++++.++.+.+.++...+..... .....+.+....
T Consensus 284 ~~~------------~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp-~~~~~~~~~~~~ 350 (462)
T PRK15034 284 PDV------------NILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLP-GTGSGNFIAFYA 350 (462)
T ss_pred ChH------------HHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-cccccHHHHHHH
Confidence 110 0111223345667778889999999999999999888777766544333221 000111222333
Q ss_pred HHHHHHHHhhcCccccccccccccCch---------------------hhhhhhhHHHHHHhhhhHHHHHHHHHHhhhcc
Q 010212 407 LYSLTFFFSNFGPNTTTFVVPAEIFPA---------------------RLRSTCHGISAASGKAGAIVGAFGFLYLADTS 465 (515)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~p~---------------------~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~ 465 (515)
.+..+....+.+ +...+-++.+.+|+ ++.|.+.|+....+.+|+++.|.++|...+..
T Consensus 351 ~~~~l~~~~G~g-ngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~ 429 (462)
T PRK15034 351 VFMGLFLTAGLG-SGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMT 429 (462)
T ss_pred HHHHHHHHhccc-chHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHc
Confidence 333333333443 33455566677764 26789999999999999999999999988865
Q ss_pred C-chHHHHHHHHHHHHHHHHHHhccc
Q 010212 466 G-VKKALLILGGANFLGMLFTFLVPE 490 (515)
Q Consensus 466 g-~~~~~~~~~~~~~~~~~~~~~~~~ 490 (515)
| +...++.+.+..++|.++.+....
T Consensus 430 g~~~~~~~~~~~~~~~~~~~~w~~y~ 455 (462)
T PRK15034 430 GSPVGAMKVFLIFYIVCVLLTWLVYG 455 (462)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5 778899999999999888874433
No 45
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=100.00 E-value=8.3e-31 Score=254.94 Aligned_cols=378 Identities=14% Similarity=0.053 Sum_probs=257.2
Q ss_pred chhHHHHHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhh
Q 010212 18 QWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGR 97 (515)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Gr 97 (515)
+++.+.....+.+..+...++...+.+..|.+.+++ +.+..+.++..+.+.+++.+++++.|+++||+||
T Consensus 8 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~----------~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~ 77 (406)
T PRK15402 8 GRQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDF----------NAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGR 77 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHh----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 345566667777778888888888889999999999 9999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHH
Q 010212 98 KRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGIL 177 (515)
Q Consensus 98 r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~ 177 (515)
|+++..+..+.+++.+++.++++ ++.+++.|+++|++.+...+...+.+.|++|+++|.+..++......+|..
T Consensus 78 r~~l~~~~~~~~~~~~~~~~~~~------~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (406)
T PRK15402 78 RPVMLAGVAFFILTCLAILLAQS------IEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPL 151 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcc------HHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988 899999999999999988889999999999999999999999888889999
Q ss_pred HHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHH-HHHhcCCchhhHHHHhccHHHHHHH
Q 010212 178 SGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYY-WRMKMPETARYTALVAKNAKQAAAD 256 (515)
Q Consensus 178 ~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~-~~~~~~e~p~~~~~~~~~~~~~~~~ 256 (515)
++|.+++.+.+ ..+||+.|++.++..++..+ ..+..||+++. .+++. + .++
T Consensus 152 ~g~~i~~~l~~-----------------------~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~-~~~ 203 (406)
T PRK15402 152 LGPLVGAALIH-----------------------VLPWRGMFVLFAALAALSFFGLWRAMPETAGR--VGEKL--S-LKE 203 (406)
T ss_pred HHHHHHHHHHH-----------------------ccCccHHHHHHHHHHHHHHHHHHHhCCCCCcc--ccccc--c-HHH
Confidence 99999988853 34599999987766665444 34557776532 10000 0 000
Q ss_pred HHHHHHhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhH-hcccCCcccchh
Q 010212 257 MSKVLQVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTA-IGWIPKAKTMNA 335 (515)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 335 (515)
. .++.++.++++. ++......+...........+.|.++.+ .++++.+
T Consensus 204 ~-------------------~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~----- 252 (406)
T PRK15402 204 L-------------------GRDYKLVLKNRR-------FVAGALALGLVSLPLLAWIALSPVILISGEQLSSYE----- 252 (406)
T ss_pred H-------------------HHHHHHHHcCcH-------HHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHH-----
Confidence 0 000011112211 2222222222222333333445655443 4554332
Q ss_pred HHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHh
Q 010212 336 IEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFS 415 (515)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (515)
.+. ......++.+++.++.+++.||+++|+.+..+..+..++..++...... .. ....+.....+..+..
T Consensus 253 ------~g~-~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~-~~~~~~~~~~~~~g~g 322 (406)
T PRK15402 253 ------YGL-LQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVI--SS-HAYLWLTAGLSLYAFG 322 (406)
T ss_pred ------HHH-HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHc--cc-ccHHHHHHHHHHHHHH
Confidence 111 3334445677888899999999999999888877776666665543211 11 1122222222222222
Q ss_pred hcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCchHHHHHHHHHHHHH
Q 010212 416 NFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSGVKKALLILGGANFLG 481 (515)
Q Consensus 416 ~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~ 481 (515)
.....+......... +++++|++.++.+....++..+|+.+.+.+.+..+.........+..++.
T Consensus 323 ~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~ 387 (406)
T PRK15402 323 IGLANAGLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLW 387 (406)
T ss_pred HHHHhhhHHHHHhhh-ccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHH
Confidence 221223333333333 34889999999999999999999999999988777544333333333333
No 46
>PRK03633 putative MFS family transporter protein; Provisional
Probab=100.00 E-value=9.5e-31 Score=252.01 Aligned_cols=362 Identities=14% Similarity=0.173 Sum_probs=253.3
Q ss_pred HHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHH
Q 010212 25 IVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMT 104 (515)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~ 104 (515)
+..+.++.+....+.....+.+|.+.+++ |.|..+.|++.+.+.++..+++++.|+++||+|||+++..+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~~----------~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~ 77 (381)
T PRK03633 8 VLLLLCGLLLLTLAIAVLNTLVPLWLAQE----------HLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLA 77 (381)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 45555777778888899999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHH
Q 010212 105 LMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAI 184 (515)
Q Consensus 105 ~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~ 184 (515)
.++.+++.++++++++ ++.++++|+++|++.+...+...+.+.+..++++|+++++++..+.++|..+|+.+++
T Consensus 78 ~~~~~~~~~~~~~~~~------~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 151 (381)
T PRK03633 78 SLIFAAGCAGLGLMVG------FWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVS 151 (381)
T ss_pred HHHHHHHHHHHHHhcc------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999988 8999999999999999888888888889999999999999999999999999999998
Q ss_pred HHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhcCCchhhHHHHhccHHHHHHHHHHHHHhh
Q 010212 185 IVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVE 264 (515)
Q Consensus 185 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~ 264 (515)
.+..... ....|+..+. ...+..+.....+|+++. +
T Consensus 152 ~l~~~~~-------------------~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-----~---------------- 187 (381)
T PRK03633 152 KVSTELM-------------------SVLPWVTGLV----LAAILPLLFTRILNQQAE-----N---------------- 187 (381)
T ss_pred ccccccc-------------------chHHHHHHHH----HHHHHHHHHhcccCCCCC-----C----------------
Confidence 8753211 1122332221 111111111112221000 0
Q ss_pred hhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccchhHHHHHHHHH
Q 010212 265 LEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKIAR 344 (515)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (515)
++..+.++.++++.. +... ...+.....+.....+.|.+.++.|.++.. .+.
T Consensus 188 ----------~~~~~~~~~~~~~~~----~~~~---~~~~~~~~~~~~~~~~lp~~~~~~g~s~~~-----------~g~ 239 (381)
T PRK03633 188 ----------HDSTSIWPMLKLRQA----RLGV---NGCIISGIVLGSLYGLMPLYLNHQGMSDAS-----------IGF 239 (381)
T ss_pred ----------CCCCCHHHHHHhcch----HHHH---HHHHHHHHHHHHHHHHHHHHHHHcCCCHHH-----------HHH
Confidence 000111122222211 1111 111111122333445677777765554332 122
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCcccccc
Q 010212 345 AQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTF 424 (515)
Q Consensus 345 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (515)
......++.+++.+..+++.||+++|+.+..+..+..++.+.+. .. .. .... ....+.......|...
T Consensus 240 -~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~-~~--------~~-~~~~-~~l~g~~~~~~~p~~~ 307 (381)
T PRK03633 240 -WMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML-SQ--------AA-MAPA-LFILGAAGFTLYPVAM 307 (381)
T ss_pred -HHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh-hh--------HH-HHHH-HHHHHHHHHhHHHHHH
Confidence 44556677788899999999999999988877777666554432 11 11 1111 1122222333457777
Q ss_pred ccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHH
Q 010212 425 VVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSGVKKALLILGGANFLGMLFTF 486 (515)
Q Consensus 425 ~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 486 (515)
+.+.|..|+++++...+..+...++|..++|.+.|.+.|..|++..|.+.+.+.++..+..+
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~ 369 (381)
T PRK03633 308 AWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLL 369 (381)
T ss_pred HHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHH
Confidence 77889998888888888888889999999999999999999999988888777766554443
No 47
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=100.00 E-value=6.6e-31 Score=252.63 Aligned_cols=352 Identities=11% Similarity=0.010 Sum_probs=249.8
Q ss_pred HHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHH
Q 010212 29 GMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMM 108 (515)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~ 108 (515)
..+.+...+......+.+|.+..++ +.+..+.+++.+++.++..++++++|+++||+|||+++..+.++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~----------~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~ 74 (365)
T TIGR00900 5 FAAQLISLIGTAITQVALPLYVLAG----------TGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIR 74 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh----------hccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHH
Confidence 3455666667777788889888888 899999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcC-----CCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHH
Q 010212 109 VICSLASGLSF-----GKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVA 183 (515)
Q Consensus 109 ~i~~~~~~~~~-----~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~ 183 (515)
.++.++..+.. + ++.+++.|+++|++.+...+...+++.|++|+++|+++.++.+.+..+|.++|+.++
T Consensus 75 ~~~~~~~~~~~~~~~~~------~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~ 148 (365)
T TIGR00900 75 AVLVAVLPFVALLGGLN------IWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIG 148 (365)
T ss_pred HHHHHHHHHHHHcCCCc------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 88888888776 6 899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhc--CCchhhHHHHhccHHHHHHHHHHHH
Q 010212 184 IIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKM--PETARYTALVAKNAKQAAADMSKVL 261 (515)
Q Consensus 184 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~--~e~p~~~~~~~~~~~~~~~~~~~~~ 261 (515)
+.+.+. .+||+.|++.++..++..+..+.+ ||+++. ++++.++ +..
T Consensus 149 ~~l~~~-----------------------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~--~~~---- 196 (365)
T TIGR00900 149 GLMYAT-----------------------LGIKWAIWVDAVGFAISALLIVSVRIPELAAS---EIQALSN--AVL---- 196 (365)
T ss_pred HHHHHH-----------------------hhHHHHHHHHHHHHHHHHHHHHhcccccCCCc---cccccch--hHH----
Confidence 998643 459999998777666554444333 332211 0000000 000
Q ss_pred HhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHh-hhhhHHHhH-hcccCCcccchhHHHH
Q 010212 262 QVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQN-LFQKDIFTA-IGWIPKAKTMNAIEEV 339 (515)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~ 339 (515)
++..+..+..++++. ++......+.......... .+.|.+.++ .++++.+.
T Consensus 197 ------------~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 249 (365)
T TIGR00900 197 ------------RDTREGIKFVLKNPL-------LRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHY-------- 249 (365)
T ss_pred ------------HHHHhHHHHHHcCcH-------HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHH--------
Confidence 000001111122211 1112222222222333333 556666654 45443321
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCc
Q 010212 340 YKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGP 419 (515)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (515)
........++.+++.++.+++.||++||+.+..+..+.+++...+.... .+.....+..+..++.....
T Consensus 250 ----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~ 318 (365)
T TIGR00900 250 ----GWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTP-------PNFPLFLVLWFAIGVGYGPI 318 (365)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhc-------hhHHHHHHHHHHHHHHHHHH
Confidence 2245556677788888999999999999988877666666655554332 11222233333333333334
Q ss_pred cccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccC
Q 010212 420 NTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSG 466 (515)
Q Consensus 420 ~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g 466 (515)
.+...++..|..|++.|+++.|+.+...+++..++|.+.|.+.|..|
T Consensus 319 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 319 NVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 56677888999999999999999999999999999999999988654
No 48
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=100.00 E-value=6.2e-31 Score=255.61 Aligned_cols=380 Identities=18% Similarity=0.234 Sum_probs=250.8
Q ss_pred HHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHH-----HHHHHHHHHHHHHhhhhhhhhhhhHHHHHHH
Q 010212 32 FFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNG-----VALCGTLAGQLFFGWLGDKMGRKRVYGMTLM 106 (515)
Q Consensus 32 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s-----~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~ 106 (515)
.+.+++|+..++...+.+.++++. +.++++.+.+.+ ...++..+++++.|+++||+|||+++..+.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~ 73 (394)
T TIGR00883 2 NAVEWFDFYLYGFAAVLVFHTFFP--------PSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLL 73 (394)
T ss_pred cchhHHHHHHHHHHHHHHHHHhcC--------CCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHH
Confidence 356788999999999999888732 234445555443 3334445789999999999999999999999
Q ss_pred HHHHHHHHhhhcCCCCchh--HHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHH
Q 010212 107 MMVICSLASGLSFGKEPKA--VMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAI 184 (515)
Q Consensus 107 ~~~i~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~ 184 (515)
+..++.+++++++++.... ....+++.|+++|++.+...+...+++.|++|+++|++..++...+..+|.++++.++.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~ 153 (394)
T TIGR00883 74 MMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVL 153 (394)
T ss_pred HHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998831100 01258999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhcCCchhhHHHHhccHHHHHHHHHHHHHhh
Q 010212 185 IVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVE 264 (515)
Q Consensus 185 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~ 264 (515)
.+....+.. ..+..+||+.|++.++..++........||+|++...+++
T Consensus 154 ~~~~~~~~~---------------~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------- 202 (394)
T TIGR00883 154 LLSYLLGDD---------------ALLEWGWRIPFLVSAVLVLIGLYLRRNLEETPVFEKAQEK---------------- 202 (394)
T ss_pred HHHHhcCHH---------------HhhccchHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHhc----------------
Confidence 775432210 0135689999998777766666555667777643110000
Q ss_pred hhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhH-hcccCCcccchhHHHHHHHH
Q 010212 265 LEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTA-IGWIPKAKTMNAIEEVYKIA 343 (515)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 343 (515)
+++.+.+.++.++++. +.++......+......+....+.|.+.++ .+.++.. .
T Consensus 203 --------~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~------------~ 257 (394)
T TIGR00883 203 --------HKKKRGPIRETLTKHR-----KPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANS------------A 257 (394)
T ss_pred --------cccccCCHHHHHHhch-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhH------------H
Confidence 0001112222222211 123333334444445566666777877743 4544432 1
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccc
Q 010212 344 RAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTT 423 (515)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (515)
........+..+++.++.+++.||+|||+.+.....+..+.......... .. ..........+..++......+..
T Consensus 258 ~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~g~~~~~~~~~~ 333 (394)
T TIGR00883 258 LLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALL---DS-GSFTLFFFLVLGLALIGGMYTGPM 333 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHh---cC-CchHHHHHHHHHHHHHHHHHhhhH
Confidence 12445566677888889999999999999876554444333221111110 01 112222222233333332335567
Q ss_pred cccccccCchhhhhhhhHHHH-HHhhhhHHHHHHHHHHhhhccC-chHHHHHHHHHHH
Q 010212 424 FVVPAEIFPARLRSTCHGISA-ASGKAGAIVGAFGFLYLADTSG-VKKALLILGGANF 479 (515)
Q Consensus 424 ~~~~~~~~p~~~~~~~~g~~~-~~~~~g~~i~~~~~~~l~~~~g-~~~~~~~~~~~~~ 479 (515)
.++..|.+|++.|+++.++.. ....+|..++|.+.|.+.|..| ++..++...++.+
T Consensus 334 ~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~l 391 (394)
T TIGR00883 334 GSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALAL 391 (394)
T ss_pred HHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHHH
Confidence 788899999999999999854 4556788899999999999888 6665555544433
No 49
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=100.00 E-value=2.1e-30 Score=247.80 Aligned_cols=346 Identities=24% Similarity=0.350 Sum_probs=280.6
Q ss_pred HHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHH
Q 010212 27 IAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLM 106 (515)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~ 106 (515)
.+.+..+...++....++..|.+.+++ +.+..+.+++.+...++..+++++.|+++||+|||+.+..+..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~ 72 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAEDL----------GLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLL 72 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHH
Confidence 344566777888888899999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 010212 107 MMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIV 186 (515)
Q Consensus 107 ~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l 186 (515)
+..++.+...+.++ ++.+++.|++.|++.+...+...+++.|++|+++|++.+++......+|..+++.+++.+
T Consensus 73 ~~~~~~~~~~~~~~------~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 146 (352)
T cd06174 73 LFALGSLLLAFASS------LWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLL 146 (352)
T ss_pred HHHHHHHHHHHhcc------HHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988 899999999999999999999999999999999999999999999999999999999998
Q ss_pred HHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhcCCchhhHHHHhccHHHHHHHHHHHHHhhhh
Q 010212 187 SAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVELE 266 (515)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (515)
.+. .+||+.+++.++..++..+...+++ |
T Consensus 147 ~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~--~-------------------------- 175 (352)
T cd06174 147 AES-----------------------LGWRWLFLILAILGLLLALLLLFLL--R-------------------------- 175 (352)
T ss_pred HHH-----------------------hhHHHHHHHHHHHHHHHHHHHHHHH--H--------------------------
Confidence 643 3499999997777666555443332 0
Q ss_pred HhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhHh-cccCCcccchhHHHHHHHHHH
Q 010212 267 AEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTAI-GWIPKAKTMNAIEEVYKIARA 345 (515)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 345 (515)
.++......+...........+.+.+.++. ++++.+ ...
T Consensus 176 ----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~ 215 (352)
T cd06174 176 ----------------------------LLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAE------------AGL 215 (352)
T ss_pred ----------------------------HHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHH------------HHH
Confidence 122333344444455566666777776664 443332 222
Q ss_pred HHHHHHhhhhhHHHHHHHHHHhhchhh-HHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCcccccc
Q 010212 346 QTLIALCSTVPGYWFTVALIDKIGRFA-IQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTF 424 (515)
Q Consensus 346 ~~~~~~~~~~~~~~~~g~l~d~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (515)
......++.+++.++.+++.||++||+ .+..+..+..++.+.+.... +...........+.......+...
T Consensus 216 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--------~~~~~~~~~~~~g~~~~~~~~~~~ 287 (352)
T cd06174 216 LLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAP--------SLALLLVALLLLGFGLGFAFPALL 287 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhc--------cHHHHHHHHHHHHHHHhccchhHH
Confidence 566677788889999999999999999 88888888888777665533 133333444444455555567888
Q ss_pred ccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHHh
Q 010212 425 VVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSGVKKALLILGGANFLGMLFTFL 487 (515)
Q Consensus 425 ~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 487 (515)
++..|..|+++|++.+|+.+...+++..+++.+.+.+.|..+++..+.+.+++.+++.+..++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~~ 350 (352)
T cd06174 288 TLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLLL 350 (352)
T ss_pred HHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhee
Confidence 999999999999999999999999999999999999999999999999998888888776553
No 50
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=100.00 E-value=3.5e-31 Score=264.37 Aligned_cols=377 Identities=15% Similarity=0.146 Sum_probs=264.9
Q ss_pred HHHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHH
Q 010212 23 TAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYG 102 (515)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~ 102 (515)
+++..++++.+...++....++..|.+.+++ |.+..+.+++.+.+.++..++.++.|+++||+|||++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~----------g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~ 71 (485)
T TIGR00711 2 LLTIVLMLGTFMAVLDSTIVNVAIPTIAGDL----------GSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFL 71 (485)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------CCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHH
Confidence 3456677788889999999999999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHH
Q 010212 103 MTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMV 182 (515)
Q Consensus 103 ~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l 182 (515)
.+.++..+++++++++++ ++.+++.|+++|++.+...+...+++.|++|+++|+++.+++..+..+|..+|+.+
T Consensus 72 ~~~~~~~~~~~~~~~~~~------~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 145 (485)
T TIGR00711 72 ISTFAFTLGSLLCGVAPN------LELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTL 145 (485)
T ss_pred HHHHHHHHHHHHHhCcCC------HHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhcc
Confidence 999999999999999998 89999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHH-HHHhcCCchhhHHHHhccHHHHHHHH----
Q 010212 183 AIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYY-WRMKMPETARYTALVAKNAKQAAADM---- 257 (515)
Q Consensus 183 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~-~~~~~~e~p~~~~~~~~~~~~~~~~~---- 257 (515)
++.+. +..+||+.|++.++.+++..+ ..+++||+++. .+ ++.+.....+
T Consensus 146 ~~~l~-----------------------~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~d~~g~~l~~~~ 199 (485)
T TIGR00711 146 GGWII-----------------------ENYHWRWIFLINVPIGIIVVVVAFFILPRDKPA--AS-ENFDFLGLLLLSVG 199 (485)
T ss_pred HhHhc-----------------------cCcCceehhhhhhHHHHHHHHHHHHHcCCcccc--cc-CCCcHHHHHHHHHH
Confidence 99884 456799999997766665443 44556765432 11 1111100000
Q ss_pred ----HHHHHhhhhHh--hh------------------hHHHhhcCC--cchhhhhhhhhhhhHHHHHHHHHHHHHHHHHH
Q 010212 258 ----SKVLQVELEAE--QE------------------KVEQEKGKN--DFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYY 311 (515)
Q Consensus 258 ----~~~~~~~~~~~--~~------------------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (515)
........+.. .+ ..+.+++++ ..+.++++ .++......+.....++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~ 272 (485)
T TIGR00711 200 LGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWELTDDNPLVDLRLFKYR-------NFTIGCVYMSLLGLGLY 272 (485)
T ss_pred HHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCCCCccCHHHHcCC-------ChHHHHHHHHHHHHHHH
Confidence 00000000000 00 000011111 11122221 12222333444445566
Q ss_pred HHhhhhhHHHhH-hcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHh
Q 010212 312 SQNLFQKDIFTA-IGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAI 390 (515)
Q Consensus 312 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~ 390 (515)
....+.|.++++ .|+++.+. ........++.+++.++.+++.||++||+.+..+..+.+++..++..
T Consensus 273 ~~~~~~p~~~~~~~g~s~~~~------------g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~ 340 (485)
T TIGR00711 273 GSFYLLPLYLQQVLGYTALQA------------GLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAF 340 (485)
T ss_pred HHHHHHHHHHHHhcCCCHHHH------------HHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhc
Confidence 666777888766 45554332 22556677788889999999999999999988888777777666542
Q ss_pred hhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhc
Q 010212 391 PYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADT 464 (515)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~ 464 (515)
.. .+...........+..+++.....+.......+..|+++++++.|+.+...++|+.+++.+.+.+.++
T Consensus 341 ~~----~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 341 TF----TPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred cC----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 21 11112222222222222222222233445556778999999999999999999999999999999874
No 51
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=100.00 E-value=3.1e-32 Score=263.28 Aligned_cols=373 Identities=15% Similarity=0.164 Sum_probs=251.6
Q ss_pred HhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHH
Q 010212 30 MGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMV 109 (515)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~ 109 (515)
++++..++++..++...|.+.+++ +.+..+.+++.+.+.++..+++++.|+++||+|||+++..+.++.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~----------g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 71 (379)
T TIGR00881 2 IGYAAYYLVRKNFALAMPYLVEEI----------GLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCA 71 (379)
T ss_pred chhhHHHHhHHhhhhhhHHHHHHh----------CCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHH
Confidence 356777889999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHH-HHHHHHHH
Q 010212 110 ICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGG-MVAIIVSA 188 (515)
Q Consensus 110 i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~-~l~~~l~~ 188 (515)
++.++++++++ ++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|..+++ .++..+.
T Consensus 72 ~~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~- 144 (379)
T TIGR00881 72 IVNLFFGFSTS------LWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIA- 144 (379)
T ss_pred HHHHHHHHhhh------HHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHH-
Confidence 99999999998 899999999999999999999999999999999999999999999999999999 4665553
Q ss_pred hhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHH-HHHHHHhcCCchhhHHHHhccHHHHHHHHHHHHHhhhhH
Q 010212 189 AFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALL-TYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVELEA 267 (515)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~-~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (515)
...+||+.|++.++..++ .++..++.||+|+.. +.++.++..+ ++ .
T Consensus 145 ----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-------~~--~ 191 (379)
T TIGR00881 145 ----------------------ELYSWHWVFIVPGIIAIIVSLICFLLLRDSPQSC--GLPPAEEMPN-------EE--P 191 (379)
T ss_pred ----------------------hcCCchhHHHHHHHHHHHHHHHHheeeCCCcccc--ccCccccCcc-------cc--c
Confidence 345699999987766555 444555677766431 1110000000 00 0
Q ss_pred hhhhHHHhhcCCcch-hhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhH-hcccCCcccchhHHHHHHHHHH
Q 010212 268 EQEKVEQEKGKNDFG-LFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTA-IGWIPKAKTMNAIEEVYKIARA 345 (515)
Q Consensus 268 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 345 (515)
+.++.+++++.+.++ ..+....+ +.++...+..+...........+.|.++++ .++++.+ ...
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~------------~~~ 256 (379)
T TIGR00881 192 DGDAEKKEEELTKKQIFLQYVLLN---KVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEK------------ASW 256 (379)
T ss_pred ccccccccccccchHHHHHHHHhc---chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH------------HHH
Confidence 000000001111111 11111111 123333344444444555556667777654 4554433 122
Q ss_pred HHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccc
Q 010212 346 QTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFV 425 (515)
Q Consensus 346 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (515)
......++.+++.++.+++.||..+|+...............+.... . .+...........+..+....+..+....
T Consensus 257 ~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 333 (379)
T TIGR00881 257 AFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYW--L-NPAANPLMDLICLFALGFLVYGPQMLIGV 333 (379)
T ss_pred HHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHh--c-CcchhHHHHHHHHHHHHHHHhhhhHHHHH
Confidence 55566677888999999999986433222222111111111111111 0 00111222222223333333333444556
Q ss_pred cccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCchHH
Q 010212 426 VPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSGVKKA 470 (515)
Q Consensus 426 ~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~~~ 470 (515)
+..|..|++.|+++.|+.+...++|..++|.+.|.+.|..||+..
T Consensus 334 ~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~ 378 (379)
T TIGR00881 334 IASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGWAGA 378 (379)
T ss_pred HHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhccccc
Confidence 788999999999999999999999999999999999999888754
No 52
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=100.00 E-value=4.1e-30 Score=248.93 Aligned_cols=355 Identities=15% Similarity=0.159 Sum_probs=246.1
Q ss_pred HHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHH
Q 010212 26 VIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTL 105 (515)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~ 105 (515)
..+.+..+..........+..|.+.+++ |.++++.+++.+.+.++..++++++|+++||+|||+++..+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~----------g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~ 77 (385)
T TIGR00710 8 LLLGCLSILGPLGIDMYLPAFPEIAADL----------STPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGL 77 (385)
T ss_pred HHHHHHHHHHHHHHHHhcccHHHHHHHh----------CCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHH
Confidence 3333334555667778888999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHH
Q 010212 106 MMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAII 185 (515)
Q Consensus 106 ~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~ 185 (515)
++.+++.+++.++++ ++.+++.|++.|++.+...+...+++.|++|+++|+++.++.+....+|..+++.+++.
T Consensus 78 ~~~~~~~~~~~~~~~------~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 151 (385)
T TIGR00710 78 FIFALSSLGLALSNN------IETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGY 151 (385)
T ss_pred HHHHHHHHHHHHHcc------HHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999988 89999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHH-HHHhcCCchhhHHHHhccHHHHHHHHHHHHHhh
Q 010212 186 VSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYY-WRMKMPETARYTALVAKNAKQAAADMSKVLQVE 264 (515)
Q Consensus 186 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~-~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~ 264 (515)
+.+ ..+||+.|++.++..++..+ ..+..||+++. .++++.++..
T Consensus 152 l~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~---------- 196 (385)
T TIGR00710 152 ILV-----------------------WLSWHAIFAFLSLAGILLSALIFFILPETLPY--EARIQISTYF---------- 196 (385)
T ss_pred HHH-----------------------HcCHHHHHHHHHHHHHHHHHHHHHhCCCCCCC--cccCCHHHHH----------
Confidence 853 34599999987666655433 44556776543 1110000000
Q ss_pred hhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHh-HhcccCCcccchhHHHHHHHH
Q 010212 265 LEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFT-AIGWIPKAKTMNAIEEVYKIA 343 (515)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 343 (515)
+..++.++++. ++...+.........+....+.|.+++ ..++++...
T Consensus 197 -------------~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~------------ 244 (385)
T TIGR00710 197 -------------ETFLLLLKSKM-------FWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVF------------ 244 (385)
T ss_pred -------------HHHHHHHcCch-------hHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHH------------
Confidence 00111112111 111222222223334444555666655 345544331
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccc
Q 010212 344 RAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTT 423 (515)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (515)
........++.+++.++.+++.||+++|+.+..+..+..++.+++....... ..............+.......+..
T Consensus 245 g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~ 321 (385)
T TIGR00710 245 GLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILG---LGSWAMIIGPMMFVGIGNSMISSIA 321 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhc---cchHHHHHHHHHHHHHHHHHHHHHH
Confidence 1245556677888999999999999999988887777666665554432110 0122222222222323233334555
Q ss_pred cccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCc
Q 010212 424 FVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSGV 467 (515)
Q Consensus 424 ~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~ 467 (515)
.....|..| +.++++.++.+...+.++.+.+.+.+.+.+..++
T Consensus 322 ~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~ 364 (385)
T TIGR00710 322 MAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVSLIHGNTAW 364 (385)
T ss_pred HHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHHhccccChH
Confidence 667778777 6789999999999887666666666755443333
No 53
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=100.00 E-value=4e-30 Score=250.92 Aligned_cols=374 Identities=13% Similarity=0.125 Sum_probs=256.6
Q ss_pred HHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhH-----HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhH
Q 010212 26 VIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNV-----ASAVNGVALCGTLAGQLFFGWLGDKMGRKRV 100 (515)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~-----~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~ 100 (515)
...+++.+..........+.+|.+.+++ |.+..+ .|++.+++.++..++++++|+++||+|||++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~----------g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 86 (408)
T PRK09874 17 TVAWLGCFLTGAAFSLVMPFLPLYVEQL----------GVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIM 86 (408)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHh----------CCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHH
Confidence 3445566666777777888999998888 776544 5899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHH
Q 010212 101 YGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGG 180 (515)
Q Consensus 101 l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~ 180 (515)
+..+.++.+++.+++.+.++ ++.+++.|++.|++.+ ..+....++.|++|+++|+++.++...+..+|..+++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 159 (408)
T PRK09874 87 LLRSALGMGIVMVLMGLAQN------IWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGP 159 (408)
T ss_pred HHHHHHHHHHHHHHHHHHhh------HHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999888888 8999999999999855 4677888999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHH-HHHhcCCchhhHHHHhccHHHHHHHHHH
Q 010212 181 MVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYY-WRMKMPETARYTALVAKNAKQAAADMSK 259 (515)
Q Consensus 181 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~-~~~~~~e~p~~~~~~~~~~~~~~~~~~~ 259 (515)
.+++.+.+. .+||+.|++.++..++..+ ..+++||+++. .+++++.+. + +
T Consensus 160 ~~~~~l~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~---~ 210 (408)
T PRK09874 160 LAGGLLADS-----------------------YGLRPVFFITASVLFLCFLVTLFCIRENFQP--VSKKEMLHM-R---E 210 (408)
T ss_pred HHHHHHHHH-----------------------hCHHHHHHHHHHHHHHHHHHHHHHhccCccc--ccchhhhHH-H---H
Confidence 999988643 4599999987776655443 44556665422 000000000 0 0
Q ss_pred HHHhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccchhHHHH
Q 010212 260 VLQVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEV 339 (515)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (515)
..+.++++.. .+.+.. ..............+.+.+..+.+..... ..
T Consensus 211 --------------------~~~~~~~~~~---~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 257 (408)
T PRK09874 211 --------------------VVTSLKNPKL---VLSLFV---TTLIIQVATGSIAPILTLYVRELAGNVSN-------IA 257 (408)
T ss_pred --------------------HHHhCcCCch---HHHHHH---HHHHHHHHHHHHHHHHHHHHHHHhccchH-------HH
Confidence 0001111111 011111 11111112222233344444443221111 00
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCc
Q 010212 340 YKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGP 419 (515)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (515)
. ..........++.+++.+..+++.||++||+.+..+..+..++.+.+.... +.+ ...+..+..+.+....
T Consensus 258 ~-~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~-~~~~~~~~~g~~~~~~ 328 (408)
T PRK09874 258 F-ISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQ-------TPL-QLGILRFLLGAADGAL 328 (408)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhc-------cHH-HHHHHHHHHHhhhHhh
Confidence 0 112233444566677788899999999999998887776665555443322 122 2222333333333334
Q ss_pred cccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHHh
Q 010212 420 NTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSGVKKALLILGGANFLGMLFTFL 487 (515)
Q Consensus 420 ~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 487 (515)
.+...+...+..|++.+|+.+++.+....+|..++|.+.|.+.+..||+..|.+.+++.+++.+..++
T Consensus 329 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 329 LPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred HHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 55566667788888999999999999999999999999999999999999999998888887776654
No 54
>PRK11043 putative transporter; Provisional
Probab=100.00 E-value=8.1e-30 Score=247.71 Aligned_cols=350 Identities=14% Similarity=0.096 Sum_probs=242.4
Q ss_pred HHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHH
Q 010212 32 FFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVIC 111 (515)
Q Consensus 32 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~ 111 (515)
.+...+....+.+..|.+.+++ +.++++.+++.+++.++..++++++|+++||+|||+++..+..+.+++
T Consensus 15 ~~~~~~~~~~~~p~~~~i~~~~----------~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 84 (401)
T PRK11043 15 SMLGFLATDMYLPAFKAIQADL----------QTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALG 84 (401)
T ss_pred HHHHHHHHHHHHhhHHHHHHHH----------CCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHH
Confidence 4444556677788889999999 999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 010212 112 SLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFK 191 (515)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~ 191 (515)
.+++.++++ ++.+++.|+++|++.+...+...+++.|++|++++++..+.......+|..++|.+++.+.
T Consensus 85 ~~~~~~~~~------~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~---- 154 (401)
T PRK11043 85 SLGMLWVES------AAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLL---- 154 (401)
T ss_pred HHHHHHhcC------HHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----
Confidence 999999988 8999999999999988877888899999999999999999998889999999999999885
Q ss_pred cCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhcCCchhhHHHHhccHHHHHHHHHHHHHhhhhHhhhh
Q 010212 192 ANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVELEAEQEK 271 (515)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (515)
+..+||+.|++.++..++..+..++++|+++. . ++ ++..
T Consensus 155 -------------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~-~~~~----------------- 193 (401)
T PRK11043 155 -------------------NHFGWQAIFATLFAITLLLILPTLRLKPSKKA--R--KQ-SQDA----------------- 193 (401)
T ss_pred -------------------hcCChHHHHHHHHHHHHHHHHHHHHcCCCCCc--c--cc-chHH-----------------
Confidence 34569999998777776665555556655432 0 00 0000
Q ss_pred HHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccchhHHHHHHHHHHHHHHHH
Q 010212 272 VEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKIARAQTLIAL 351 (515)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (515)
.+.++.++++.. +...+........++....+.|.+.++.|+++...+ .......
T Consensus 194 ------~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g------------~~~~~~~ 248 (401)
T PRK11043 194 ------LTFKQLLKSKTY-------LGNVLIFAACSAAFFAWLTGSPFILEQMGYSPADIG------------LSYVPQT 248 (401)
T ss_pred ------HHHHHHHcChhH-------HHHHHHHHHHHHHHHHHHHHhHHHHHHcCCCHHHHH------------HHHHHHH
Confidence 001111222211 111111222223334445566777776666544321 1334455
Q ss_pred hhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccC
Q 010212 352 CSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIF 431 (515)
Q Consensus 352 ~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (515)
++.+++.++.+++.||+++|+..........++.+.+....... ....+ .........+.......+...+...|..
T Consensus 249 ~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (401)
T PRK11043 249 IAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLS--HPSLV-PLLIPFCVMAAANGAIYPIVVAQALRPF 325 (401)
T ss_pred HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhc--cCcHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhC
Confidence 66778888899999999998876665555544443332221101 11122 2222222222333334555555666666
Q ss_pred chhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCchHHH
Q 010212 432 PARLRSTCHGISAASGKAGAIVGAFGFLYLADTSGVKKAL 471 (515)
Q Consensus 432 p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~~~~ 471 (515)
| +.++++.|+.+.....+...++.+.+.+.+.......+
T Consensus 326 ~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~ 364 (401)
T PRK11043 326 P-QATGKAAALQNTLQLGLCFLASLLVSALISTPLLTTGS 364 (401)
T ss_pred c-ccChHHHHHHHHHHHHHHHHHHHHHHHccCCChhHHHH
Confidence 6 57999999999999999999999999998754444433
No 55
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=100.00 E-value=6.8e-30 Score=247.63 Aligned_cols=362 Identities=10% Similarity=0.045 Sum_probs=238.9
Q ss_pred HHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhh---hc-
Q 010212 43 SLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASG---LS- 118 (515)
Q Consensus 43 ~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~---~~- 118 (515)
...++.+.+++ +.++++.|++.+.+.++..+++++.|+++||+||||++..+..+++++++++. +.
T Consensus 33 ~~~~~~~~~~~----------g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~ 102 (402)
T TIGR00897 33 QGWLSPFLKAL----------GLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGH 102 (402)
T ss_pred HHhHHHHHHHh----------CCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 34555666788 99999999999999999999999999999999999999999999998877653 32
Q ss_pred CCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHH-HHHHHHHHHHHHhhhcCCCCC
Q 010212 119 FGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGI-LSGGMVAIIVSAAFKANFPAP 197 (515)
Q Consensus 119 ~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~-~~g~~l~~~l~~~~~~~~~~~ 197 (515)
.+ ++.+++.|+++|++.+...+...+.+.|++|+++|++++|+.+.+.++|. .+++++++.+.
T Consensus 103 ~~------~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~---------- 166 (402)
T TIGR00897 103 AN------YPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAI---------- 166 (402)
T ss_pred cc------HHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----------
Confidence 34 78889999999999888778888889999999999999999999999997 57898888774
Q ss_pred ccCCCCCCccccCCCchHHHHHHHhHHHHHH-HHHHHHhcCCchhhHHHHhccHHHHHHHHHHHHHhhhhHhhhhHHHhh
Q 010212 198 IYSANPAASTVPEADYIWRIILMFGAIPALL-TYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVELEAEQEKVEQEK 276 (515)
Q Consensus 198 ~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~-~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (515)
+..||+..++......++ ..+..++.+|.++. .++++ +++.+ +.
T Consensus 167 -------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~---------------~~---- 211 (402)
T TIGR00897 167 -------------PAFGEMNTLWSALAFVLTGGVIALFSNKDIFTP--QHMQT-REKFS---------------EL---- 211 (402)
T ss_pred -------------cccchHHHHHHHHHHHHHHHHHHHhccCCCCCc--ccccC-Ccchh---------------hH----
Confidence 334555544443222222 22233344443221 00000 00000 00
Q ss_pred cCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccchhHHHHHHHHHHHHHHHHhhhhh
Q 010212 277 GKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVP 356 (515)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (515)
.+..+..++++ .++...+..++.....+....+.|.+.++.|+++.+.+ .......++.++
T Consensus 212 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~------------~~~~~~~~~~~i 272 (402)
T TIGR00897 212 GKAATILFTNP-------NVLLGGMVRIINTIGLFGFAVFLPMFVAELGFSTSEWL------------QIWGTFFFTNIV 272 (402)
T ss_pred HHHHHHHHcCh-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHH------------HHHHHHHHHHHH
Confidence 00001111211 22333334444455667777788988887776654321 144455677888
Q ss_pred HHHHHHHHHHhhchhhHHH-HHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchhh
Q 010212 357 GYWFTVALIDKIGRFAIQL-MGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARL 435 (515)
Q Consensus 357 ~~~~~g~l~d~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 435 (515)
+.+..|+++||++||+... .+.....++...+....... . ..........+..+....+..+. .....|..| ++
T Consensus 273 g~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~--~-~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~~-~~ 347 (402)
T TIGR00897 273 FNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHF--G-HSFAVALIIAIALGIFLAGYVPL-AAVFPTLAP-KH 347 (402)
T ss_pred HHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHcc--C-CcHHHHHHHHHHHHHHHHHHHHH-HHHHHhhCc-ch
Confidence 9999999999999888754 22233333322222111000 1 11222222222222222222332 345567655 68
Q ss_pred hhhhhHHHHHHhhhhHHHHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHHhcc
Q 010212 436 RSTCHGISAASGKAGAIVGAFGFLYLADTSGVKKALLILGGANFLGMLFTFLVP 489 (515)
Q Consensus 436 ~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 489 (515)
|+++.|+.+...++++.++|.+.+.+.|..|+...+++.+++.+++.+...++|
T Consensus 348 ~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~~~ 401 (402)
T TIGR00897 348 KGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAFIR 401 (402)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999998888888777766653
No 56
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=100.00 E-value=8.8e-30 Score=245.67 Aligned_cols=364 Identities=12% Similarity=0.040 Sum_probs=245.6
Q ss_pred hHHHHHHhhhHHHHHHhh-hhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHH-HHHHHH
Q 010212 31 GFFTDAYDLFCISLVTKL-LGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYG-MTLMMM 108 (515)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~-~~~~~~ 108 (515)
.++..++......+.+|. +.+++ |.+..+.|++.+.+.+...+.+++.|+++||+||||.++ .+..+.
T Consensus 5 ~~~~~~~~~~~~~~~l~~~l~~~~----------g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~ 74 (375)
T TIGR00899 5 VAFLTGIAGALQFPTLSLFLSEEV----------RARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLA 74 (375)
T ss_pred HHHHHHHHHHHHhhHHHHHHHccc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHH
Confidence 456666677777787776 56788 999999999999999999999999999999999988755 466666
Q ss_pred HHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhH--HHHHHHHHHHHHHHHHHHHHHH
Q 010212 109 VICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAF--IAAVFAMQGFGILSGGMVAIIV 186 (515)
Q Consensus 109 ~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~--~~~~~~~~~~G~~~g~~l~~~l 186 (515)
.++.++++++++ ++.+++.|+++|.+.+...|...+++.|+.|+++|++. .+....+.++|.++|+.+++.+
T Consensus 75 ~~~~~~~~~~~~------~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l 148 (375)
T TIGR00899 75 ALACLLFAWNRN------YFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWL 148 (375)
T ss_pred HHHHHHHHhcch------HHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHH
Confidence 777888888888 78899999999988888888888999999888777654 5777888899999999999988
Q ss_pred HHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHH-HHHhcCCchhhHHHHhccHHHHHHHHHHHHHhhh
Q 010212 187 SAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYY-WRMKMPETARYTALVAKNAKQAAADMSKVLQVEL 265 (515)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~-~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (515)
. +..+||+.|++.++..++..+ ..+++||+|++. ++++ +
T Consensus 149 ~-----------------------~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~------------- 188 (375)
T TIGR00899 149 A-----------------------LGFGFTVMFLTAALAFVLCGVLVWLFLPSYPRGA--PGAL--T------------- 188 (375)
T ss_pred H-----------------------HhcccHHHHHHHHHHHHHHHHHHHHhCCCcccCc--cccc--C-------------
Confidence 5 345699999998776665444 445588876531 1000 0
Q ss_pred hHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHh-HhcccCCcccchhHHHHHHHHH
Q 010212 266 EAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFT-AIGWIPKAKTMNAIEEVYKIAR 344 (515)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 344 (515)
+.+.++.++++.. +......+ ...........+.|.+++ +.+.++.+. +.
T Consensus 189 -----------~~~~~~~~~~~~~----~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~~~~~~-----------g~ 239 (375)
T TIGR00899 189 -----------RLEVRGLLASRDT----RLLFVACT---LMWGCNILYIINMPLLIIHELGLPDKLA-----------GL 239 (375)
T ss_pred -----------cchhhhhhcCcch----HHHHHHHH---HHHHHHHHHHhhhHHHHHHHcCCCHHHH-----------HH
Confidence 0000011111111 11111111 111112222334455543 345443321 11
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCcccccc
Q 010212 345 AQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTF 424 (515)
Q Consensus 345 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (515)
......+..+++.++.+++.||++||+.+..+..+..+....+.... +.+ ......+..++......+...
T Consensus 240 -~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~-~~~~~~~~~g~~~g~~~~~~~ 310 (375)
T TIGR00899 240 -MMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADN-------SLW-ALLMLQLLNAIFIGILAGIGM 310 (375)
T ss_pred -HHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHH-------HHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 23333445566778899999999999988776665544443332221 122 222222222222222245556
Q ss_pred ccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHHhcc
Q 010212 425 VVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSGVKKALLILGGANFLGMLFTFLVP 489 (515)
Q Consensus 425 ~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 489 (515)
.+..|..|+ ++++++++.+...++|..++|.+.|.+.+..|++..+.+.+++.+++.++..+++
T Consensus 311 ~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 374 (375)
T TIGR00899 311 LYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLLIK 374 (375)
T ss_pred HHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHheec
Confidence 677888875 5679999999999999999999999999999999999988888888877765553
No 57
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.4e-30 Score=249.74 Aligned_cols=368 Identities=16% Similarity=0.235 Sum_probs=266.9
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhc
Q 010212 61 SPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFG 140 (515)
Q Consensus 61 ~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 140 (515)
..++++.++.+++.+.++.|+.+++++.|+++||+|.|+++..+.++.++++++...+.+.+ ++.+++.|++||++
T Consensus 66 ~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~----~~~~~~~R~lqGl~ 141 (466)
T KOG2532|consen 66 GEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIG----FYLLLVLRFLQGLG 141 (466)
T ss_pred ceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhc----chhhHHHHHHhHHH
Confidence 45689999999999999999999999999999999999999999999999999999987643 56889999999999
Q ss_pred cccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHH
Q 010212 141 IGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILM 220 (515)
Q Consensus 141 ~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~ 220 (515)
.|..+|+...+.++|.|++||++..++...+..+|.+++.++++.+.+ ...||+.+|+
T Consensus 142 ~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~----------------------s~~GW~sifY 199 (466)
T KOG2532|consen 142 QGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCE----------------------SSLGWPSIFY 199 (466)
T ss_pred HhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhc----------------------cCCCCchHHH
Confidence 999999999999999999999999999999999999999999999963 3478999999
Q ss_pred HhHHHHHHHHH-HHHhcCCchhhHHHHhccHHHHHHHHHHHHHhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHH
Q 010212 221 FGAIPALLTYY-WRMKMPETARYTALVAKNAKQAAADMSKVLQVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGT 299 (515)
Q Consensus 221 ~~~~~~~~~~~-~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (515)
+.++.+++..+ +.++..|+|..+ +.-.+++.+.+++-. .+++.+++.+.+++++++++ .+|.+
T Consensus 200 ~~g~~g~i~~~~w~~~~~d~P~~h---~~is~~El~~I~~~k------~~~~~~~~~~vP~~~i~ts~-------~vwai 263 (466)
T KOG2532|consen 200 VFGIVGLIWFILWFLFYSDSPSKH---PNISEKELKYIEKGK------SEAHVKKKPPVPYKAILTSP-------PVWAI 263 (466)
T ss_pred HHHHHHHHHHHHHHHHhcCCcccC---CCCCHHHHHHHHhcc------cccccCCCCCCCHHHHHcCH-------HHHHH
Confidence 98888777544 556677777642 111112222111100 00000001233445555444 46778
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHhH-hcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchh-------
Q 010212 300 TVTWFLLDVAYYSQNLFQKDIFTA-IGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRF------- 371 (515)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~------- 371 (515)
.+..++....++....+.|.|+++ ++++..+.+. ...+..+...+..+++|.++||..+|
T Consensus 264 ~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~------------~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~ 331 (466)
T KOG2532|consen 264 WISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGF------------LSALPFLAMAIVKFVAGQLSDRLTFRILSETTV 331 (466)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhH------------HHHHHHHHHHHHHHHHHHHHHHHhhccCchHhH
Confidence 888888889999999999999997 5555544222 55566667777888999999997552
Q ss_pred --hHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhh
Q 010212 372 --AIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKA 449 (515)
Q Consensus 372 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~ 449 (515)
..-.++....+++++.+.+.. ....+..++++.+..++.+.. .+-.+....+.. +++.+..+|+.+.+..+
T Consensus 332 rkifn~i~~~~~ai~l~~l~~~~-----~~~~~~a~~~l~~~~~~~g~~-~~Gf~~~~~~~a-pq~a~~l~g~~~~~~~~ 404 (466)
T KOG2532|consen 332 RKIFNTIAFGGPAVFLLVLAFTS-----DEHRLLAVILLTIAIGLSGFN-ISGFYKNHQDIA-PQHAGFVMGIINFVGAL 404 (466)
T ss_pred HHHHHhHHHHHHHHHHHeeeecC-----CCcchHHHHHHHHHHHHcccc-hhhhHhhhhhcc-chHHHHHHHHHHHHHHH
Confidence 222344444444444444332 112223333333333333222 222233334434 48899999999999999
Q ss_pred hHHHHHHHHHHhhh---ccCchHHHHHHHHHHHHHHHHHHhcc
Q 010212 450 GAIVGAFGFLYLAD---TSGVKKALLILGGANFLGMLFTFLVP 489 (515)
Q Consensus 450 g~~i~~~~~~~l~~---~~g~~~~~~~~~~~~~~~~~~~~~~~ 489 (515)
.++++|.+.+.+.. ...|+..|++.+++.+++.+++.+.-
T Consensus 405 ~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f~ 447 (466)
T KOG2532|consen 405 AGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFFG 447 (466)
T ss_pred HHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEee
Confidence 99999999999984 34699999999999988886666543
No 58
>PRK10133 L-fucose transporter; Provisional
Probab=99.98 E-value=2.4e-29 Score=244.94 Aligned_cols=392 Identities=11% Similarity=-0.012 Sum_probs=255.0
Q ss_pred chhHHHHHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhh
Q 010212 18 QWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGR 97 (515)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Gr 97 (515)
++.....+..+++.++..++++...++..|.+++++ ++++.+.|++.+.+.+++.+++++.|+++||+||
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~----------~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~ 90 (438)
T PRK10133 21 SRSYIIPFALLCSLFFLWAVANNLNDILLPQFQQAF----------TLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSY 90 (438)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 344556666777778888999999999999999999 9999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHh---hhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHH
Q 010212 98 KRVYGMTLMMMVICSLAS---GLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGF 174 (515)
Q Consensus 98 r~~l~~~~~~~~i~~~~~---~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~ 174 (515)
|+++..+..+++++++++ .++++ ++.++++|+++|+|.|...+....++.|+.|+++|.+.+++.+....+
T Consensus 91 r~~l~~g~~~~~~~~~l~~~~~~a~~------~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~ 164 (438)
T PRK10133 91 KAGIITGLFLYALGAALFWPAAEIMN------YTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSF 164 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCC------HHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHH
Confidence 999999999999999876 45677 899999999999999999999999999988888777789999999999
Q ss_pred HHHHHHHHHHHHHHhhhcC-CCCCccCCCCCCccc-cCC---CchHHHHHHH-hHHHHHHHHHH-HHhcCCchhhHHHHh
Q 010212 175 GILSGGMVAIIVSAAFKAN-FPAPIYSANPAASTV-PEA---DYIWRIILMF-GAIPALLTYYW-RMKMPETARYTALVA 247 (515)
Q Consensus 175 G~~~g~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~-~~~---~~~wr~~f~~-~~~~~~~~~~~-~~~~~e~p~~~~~~~ 247 (515)
|..+|+.++..+....... .........+ +.. ... ..+||++|+. ..+..++.++. ....||.++. +
T Consensus 165 G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~--~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~----~ 238 (438)
T PRK10133 165 GAIIAVVFGQSLILSNVPHQSQDVLDKMTP--EQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSD----N 238 (438)
T ss_pred HHHHHHHHHHHHHhcCCcccchhhhhccCh--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc----c
Confidence 9999999988764111000 0000000000 000 000 0257777764 33333332222 2334543211 0
Q ss_pred ccHHHHHHHHHHHHHhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHH-hH-hc
Q 010212 248 KNAKQAAADMSKVLQVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIF-TA-IG 325 (515)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~ 325 (515)
++ ++... +..++.++.++++..+ ...+..++.....+....+.+.++ ++ .|
T Consensus 239 ~~-~~~~~-------------------~~~~~~~~ll~~~~~~-------~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g 291 (438)
T PRK10133 239 HS-DAKQG-------------------SFSASLSRLARIRHWR-------WAVLAQFCYVGAQTACWSYLIRYAVEEIPG 291 (438)
T ss_pred cc-ccccc-------------------chhhhHHHHHhCchHH-------HHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Confidence 00 00000 0000111222322221 111112222233333334455453 32 45
Q ss_pred ccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHH
Q 010212 326 WIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFV 405 (515)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (515)
.++.. +........++.++++++++++.||+++|+++..+..+..+.+.+..... ... .
T Consensus 292 ~s~~~------------ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~-------~~~-~- 350 (438)
T PRK10133 292 MTAGF------------AANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAG-------GHV-G- 350 (438)
T ss_pred CCHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcC-------ChH-H-
Confidence 55443 22266777788899999999999999999998887666655544433211 111 1
Q ss_pred HHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccC-chHHHHHHHHHHHHH
Q 010212 406 VLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSG-VKKALLILGGANFLG 481 (515)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g-~~~~~~~~~~~~~~~ 481 (515)
.......+++.....|..++...|..|+ ..+++.++..+ ..+|+.++|.+.|.+.|..| .+.+|++...+.+..
T Consensus 351 ~~~~~l~glg~~~i~P~~~s~a~~~~~~-~~~~as~l~~~-~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~ 425 (438)
T PRK10133 351 LIALTLCSAFMSIQYPTIFSLGIKNLGQ-DTKYGSSFIVM-TIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVI 425 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccch-hhccchhHHhH-HhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence 2222333444444578888888888874 46778888864 55788999999999999887 677776554444333
No 59
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.98 E-value=3.2e-29 Score=247.47 Aligned_cols=387 Identities=11% Similarity=0.073 Sum_probs=258.3
Q ss_pred HHHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhh-----hh
Q 010212 23 TAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKM-----GR 97 (515)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~-----Gr 97 (515)
+.....++.++..+......+..+|...++. |.+.++++.+ +.....+ ++.+++|+++||+ ||
T Consensus 12 ~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~~----------g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Gr 79 (491)
T PRK11010 12 PNSAILLILGFASGLPLALTSGTLQAWMTVE----------NIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGR 79 (491)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----------CCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCC
Confidence 3345555666677778888888999998888 8999999987 4444444 6899999999999 99
Q ss_pred hhH-HHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHH
Q 010212 98 KRV-YGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGI 176 (515)
Q Consensus 98 r~~-l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~ 176 (515)
||. +..+.++.+++..++++.+.. .+++.+.+.|++.|++.+...+...+++.|++|+++|+++.++...+..+|.
T Consensus 80 rr~~ll~~~i~~~~~~~~~a~~~~~---~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~ 156 (491)
T PRK11010 80 RRGWLLATQLLLLVAIAAMGFLEPG---TQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAM 156 (491)
T ss_pred chHHHHHHHHHHHHHHHHHHHcCCc---chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHH
Confidence 986 667777777887777776431 1178899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhcCCchhhHHHHhccHHHHHHH
Q 010212 177 LSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKMPETARYTALVAKNAKQAAAD 256 (515)
Q Consensus 177 ~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~ 256 (515)
++++.++..+.+ ...|||..|++.++..++..+..++.||+++. .++++ +..+
T Consensus 157 llg~~l~~~l~~----------------------~~~GWr~~f~i~a~l~ll~~l~~~~~~e~~~~--~~~~~--~~~~- 209 (491)
T PRK11010 157 LVSGGLALWLAD----------------------RYLGWQGMYWLMAALLIPCIIATLLAPEPTDT--IPVPK--TLEQ- 209 (491)
T ss_pred HHHHHHHHHHHh----------------------cccCHHHHHHHHHHHHHHHHHHHHhcCCCccc--ccccc--chhh-
Confidence 999999988852 13579999999877777666665667886532 10000 0000
Q ss_pred HHHHHHhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHH-hHhcccCCcccchh
Q 010212 257 MSKVLQVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIF-TAIGWIPKAKTMNA 335 (515)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 335 (515)
+...+.++.++ ++..+...... +......+....+.+.++ +..|+++.+
T Consensus 210 ------------------~~~~~l~~~~~----~~~~~~~ll~~---~l~~~~~~~~~~~~~~~l~~~~G~s~~~----- 259 (491)
T PRK11010 210 ------------------AVVAPLRDFFG----RNNAWLILLLI---VLYKLGDAFAMSLTTTFLIRGVGFDAGE----- 259 (491)
T ss_pred ------------------hHHHHHHHHHc----CcCHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhcCCCHHH-----
Confidence 00001111121 11111111111 122222222233344443 445665543
Q ss_pred HHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHh
Q 010212 336 IEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFS 415 (515)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (515)
.+........++.+++.+++|++.||+++|+.+..+..+..+....+..... . ..+.+.......+.....
T Consensus 260 ------~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~-~--~~~~~~l~~~~~l~~~~~ 330 (491)
T PRK11010 260 ------VGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSI-T--DKNLYSMGAAVFFENLCG 330 (491)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh-c--cccHHHHHHHHHHHHHHH
Confidence 2222334556788889999999999999988777665554544433322111 0 111111111112211111
Q ss_pred hcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHHhcccc
Q 010212 416 NFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSGVKKALLILGGANFLGMLFTFLVPES 491 (515)
Q Consensus 416 ~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (515)
+.+ .+..+++..+..+++.+++..|+.+....+|..+++.+.|.+.|..||+..|.+.+++++++.+....++++
T Consensus 331 g~~-~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~~~ 405 (491)
T PRK11010 331 GMG-TAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCRQT 405 (491)
T ss_pred HHH-HHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 111 233456777888888999999999999999999999999999999999999999888888887777766554
No 60
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.98 E-value=3.3e-32 Score=247.71 Aligned_cols=375 Identities=15% Similarity=0.145 Sum_probs=247.1
Q ss_pred cchhHHHHHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhh
Q 010212 17 TQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMG 96 (515)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~G 96 (515)
..+..++.+.++++...++..|++.+..+.+.+++.+ |++++..|++++.+.+.+.+++|+.|+++|||+
T Consensus 27 ~~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~f----------ni~~s~~Gll~~vf~v~~~i~sPl~gyLadryN 96 (493)
T KOG1330|consen 27 SMKSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYF----------NISDSELGLLQTVFIVVFMIASPLFGYLADRYN 96 (493)
T ss_pred ccccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhc----------CCCchhccchhHHHHHHHHHHHHHHHHHHhhcC
Confidence 3455677888899999999999999999999999999 999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHH
Q 010212 97 RKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGI 176 (515)
Q Consensus 97 rr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~ 176 (515)
||+++.+|..+|.++.++++++.. ||++.++|.+.|+|++...+.++++++|.+|.++|++++++++.+..+|.
T Consensus 97 R~~v~~vG~~iW~~Av~~~~fs~~------Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGs 170 (493)
T KOG1330|consen 97 RKRVIAVGIFIWTLAVFASGFSNH------FWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGS 170 (493)
T ss_pred cceEEeeHHHHHHHHHHHHHHHHH------HHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhccccc
Confidence 999999999999999999999966 99999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHH-HHHhcCCchhhHHHHhccHHHHHH
Q 010212 177 LSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYY-WRMKMPETARYTALVAKNAKQAAA 255 (515)
Q Consensus 177 ~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~-~~~~~~e~p~~~~~~~~~~~~~~~ 255 (515)
.+|.+.+..+...... |||.|+..++++++..+ ..++.+|+++. .+++.+.+.
T Consensus 171 glG~vvgs~va~~~~~----------------------Wr~af~~~avl~vi~~~L~~~f~~eP~rg--a~~~~~~~~-- 224 (493)
T KOG1330|consen 171 GLGYVVGSVVASLTFW----------------------WRWAFRGSAVLGVIVGLLVFLFVREPERG--ARDEVDGEN-- 224 (493)
T ss_pred ceeEEeeeeeccCccc----------------------eEEEEEeehHHHHHHHHHHHhhccCcccc--cccccccCC--
Confidence 9999999988644332 99999998888877554 45666776542 000000000
Q ss_pred HHHHHHHhhhhHhhhhHHHhhcCCcchhhhhhhh-hhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccch
Q 010212 256 DMSKVLQVELEAEQEKVEQEKGKNDFGLFSAKFV-RRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMN 334 (515)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (515)
+ ......+.++..+.... +......+......+..+..-+....+.+...+-.+...
T Consensus 225 --------------~--~~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~------ 282 (493)
T KOG1330|consen 225 --------------K--MVKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDH------ 282 (493)
T ss_pred --------------c--CCCCccchHHHHHHHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCcc------
Confidence 0 00011111111111111 110011222222222222222222222222222222111
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchh----hHHHHHHHHHHH----HHHHHHhhhhcccCCCchHHHHH
Q 010212 335 AIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRF----AIQLMGFFFMTV----FMFALAIPYHHWTLPDHRIGFVV 406 (515)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~----~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 406 (515)
..+.+...+...++++|.+.+|.++||+.|+ ......-..++. +..++..... .........+
T Consensus 283 ------~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~---~~~~s~~~~~ 353 (493)
T KOG1330|consen 283 ------NATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPA---FTSSSMIFGL 353 (493)
T ss_pred ------ccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHh---hhhHHHHHHH
Confidence 1244466777778888888888899885321 111211111111 1111111110 1112222222
Q ss_pred HHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhh-hHHHHHHHHHHhhhc
Q 010212 407 LYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKA-GAIVGAFGFLYLADT 464 (515)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~-g~~i~~~~~~~l~~~ 464 (515)
++.++.-.......+...-+..|+.|++.|.+++++-..+..+ |.+-+|++.|.+.|.
T Consensus 354 il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~ 412 (493)
T KOG1330|consen 354 ILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDK 412 (493)
T ss_pred HHHHHHHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHH
Confidence 2222222222222333445668889999999999998877765 666677799999883
No 61
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.98 E-value=2.1e-29 Score=242.83 Aligned_cols=368 Identities=12% Similarity=0.026 Sum_probs=243.0
Q ss_pred HHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHH
Q 010212 28 AGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMM 107 (515)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~ 107 (515)
.+++.+...+.........+.+.+++ +.+..+.+++.+.+.+++.++++++|+++||+|||++++.+..+
T Consensus 8 l~~~~~~~~~~~~~~~~~~~~~~~~~----------~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~ 77 (393)
T PRK11195 8 IMAAQFFSALADNALLFAAIALLKEL----------HYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGI 77 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHc----------CCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHH
Confidence 34455555554444455566667888 88899999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 010212 108 MVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVS 187 (515)
Q Consensus 108 ~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~ 187 (515)
.++++++++++.+ . ++.|+++|++.+...|...+++.|++|+++|+++.++.+....+|.++||.+++.+.
T Consensus 78 ~~~~~~~~~~~~~------~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~ 148 (393)
T PRK11195 78 KLLGCLLMLFGIH------P---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALA 148 (393)
T ss_pred HHHHHHHHHHHHH------H---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999988877655 3 788999999999999999999999999999999999999999999999999999986
Q ss_pred HhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhcCCchhhHHHHhccHHHHHHHHHHHHHhhhhH
Q 010212 188 AAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVELEA 267 (515)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (515)
+. .|+..+.+.+...++..+..+.+||+|++. ++++ ++..+..++..
T Consensus 149 ~~------------------------~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~--~~~~-~~~~~~~~~~~------ 195 (393)
T PRK11195 149 DP------------------------HAEAALAVCALIYLLAALFNLFIPRLGARR--PGQS-WNPIALLRDFF------ 195 (393)
T ss_pred HH------------------------HHHHHHHHHHHHHHHHHHHHhcCCCCcccc--cccC-CCHHHHHHHHH------
Confidence 32 277777766555555555556788876431 1111 00000000000
Q ss_pred hhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhH-hcccCCcccchhHHHHHHHHHHH
Q 010212 268 EQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTA-IGWIPKAKTMNAIEEVYKIARAQ 346 (515)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 346 (515)
+..+..++++..+. .++...+.+.. ........+.+.++ .+.++.+. ...
T Consensus 196 ----------~~~~~l~~~~~~~~---~~~~~~~~~~~----~~~~~~~~~~~~~~~lg~s~~~~------------G~~ 246 (393)
T PRK11195 196 ----------HACRVLWRDKLGRF---SLAGTTLFWGA----GATLRFLVLAWAPVALGITLNQP------------AYL 246 (393)
T ss_pred ----------HHHHHHHhCchhHH---HHHHHHHHHHH----HHHHHHHHHHHHHHHcCCChhHH------------HHH
Confidence 00012222222211 11111111221 12222223333332 34444332 225
Q ss_pred HHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCcccccccc
Q 010212 347 TLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVV 426 (515)
Q Consensus 347 ~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (515)
.....++.+++.+..+++.||.++++.+..+.. .++....+.... +.+......+..+.......+...+.
T Consensus 247 ~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~~--------~~~~~~~~~~~~G~~~g~~~~~~~~~ 317 (393)
T PRK11195 247 QAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGLVVLLMALQH--------SLLPAYPLLILIGALGGFFVVPMNAL 317 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHHHHHHHh--------HHHHHHHHHHHHHHhhhhhhhhHHHH
Confidence 566777888899999999999888887766643 333332222211 22222222222222222223445566
Q ss_pred ccccCchhh-hhhhhHHHHHHhhhhHHHHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHH
Q 010212 427 PAEIFPARL-RSTCHGISAASGKAGAIVGAFGFLYLADTSGVKKALLILGGANFLGMLFTF 486 (515)
Q Consensus 427 ~~~~~p~~~-~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 486 (515)
..+..|++. +|++.++.+...+++..++..+.+.+ +..|.+..+.+.+...+++..+.+
T Consensus 318 ~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 377 (393)
T PRK11195 318 LQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKLGVPVVAVIVGFGLLVALAMAL 377 (393)
T ss_pred HHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHH
Confidence 677766554 79999999999999999999999865 678888888887777776666665
No 62
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.98 E-value=3.3e-29 Score=251.17 Aligned_cols=380 Identities=22% Similarity=0.289 Sum_probs=271.4
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhcccc
Q 010212 64 TLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGG 143 (515)
Q Consensus 64 ~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 143 (515)
+.+.....+..+++++|..+|++++|+++||+|||++++.++++..++.+++++++| ++.+++.|+++|++.++
T Consensus 114 c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~------~~~~~~~Rfl~G~~~~~ 187 (521)
T KOG0255|consen 114 CDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPN------YWMFLIFRFLSGFFGSG 187 (521)
T ss_pred eCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCc------HHHHHHHHHHHHhhccc
Confidence 567788899999999999999999999999999999999999999999999999999 89999999999999999
Q ss_pred ccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhH
Q 010212 144 DYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGA 223 (515)
Q Consensus 144 ~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~ 223 (515)
.......++.|++++++|+.+..+ ......+..+++++++++.. +||+.+++..
T Consensus 188 ~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~-------------------------~Wr~~~~~~~ 241 (521)
T KOG0255|consen 188 PLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR-------------------------DWRWLFWIIS 241 (521)
T ss_pred hhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh-------------------------hHHHHHHHHH
Confidence 999999999999999999999999 66666777777777777752 4999999999
Q ss_pred HHHHHHHHHHHhcCCchhhHHHHhccHHHHHHHHHHHHHhh-----hhHhhhhH---HH------hhcCCcchhhhhhhh
Q 010212 224 IPALLTYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVE-----LEAEQEKV---EQ------EKGKNDFGLFSAKFV 289 (515)
Q Consensus 224 ~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~---~~------~~~~~~~~~~~~~~~ 289 (515)
++.++.++.+++.||+|+|+. .+++.+++.+.+++..+.+ ..+..+.. ++ +++....++++.+..
T Consensus 242 ~~~~~~~~~~~l~~Es~rwl~-~~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l 320 (521)
T KOG0255|consen 242 IPSGLFLLLWFLPPESPRWLL-SKGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRL 320 (521)
T ss_pred HHHHHHHHHHHccCcChHHHH-HcCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHH
Confidence 988887777777779999973 3444455666666554321 11111110 00 111234555555543
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhc
Q 010212 290 RRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIG 369 (515)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g 369 (515)
++ ..+...+.++.....+++.......+-.+ .. ............+....+...|+.|
T Consensus 321 ~~---~~~~~~~~~~~~~~~y~gl~~~~~~lg~~-----------~~--------~~~~~~~~~~~p~~~~~~~~~~~~g 378 (521)
T KOG0255|consen 321 RY---RTLYLLFIWFVFSLVYYGLSLNVSGLGGN-----------IY--------LNFTLSGLVELPAYFRNGLLLPEFG 378 (521)
T ss_pred HH---HHHHHHHHHHHHhHHHHhhhhhhhhcCch-----------HH--------HHHHHHHHHHhhHHHHHHHHHHHhC
Confidence 33 45555556665666666655433321111 10 0222223356666777789999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhh
Q 010212 370 RFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKA 449 (515)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~ 449 (515)
||.....+..+..++++...+.... ...+...++..+..++...+.. ..+.+..|++|+..|..+.+..+....+
T Consensus 379 R~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~el~pt~~r~~~~~~~~~~~~~ 453 (521)
T KOG0255|consen 379 RRPPLFLSLFLAGIGLLLFGWLPDD----LGGWLHWILPLLGKFFIGSAFN-LIFLYSAELIPTVVRNTAVGAISAAARL 453 (521)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhhcc----chhHHHHHHHHHHHHHHHHHHH-HHHHHHHhhccHHHHHHHHHHHHHHHHH
Confidence 9999999999999988888776521 1111233333333334444433 4478899999999999999999999999
Q ss_pred hHHHHHHHHHHhhhccCchHHHHHHHHHHHHHHHHH-HhccccCCCChhhhhhhhh
Q 010212 450 GAIVGAFGFLYLADTSGVKKALLILGGANFLGMLFT-FLVPESKGKSLEEMSGEAE 504 (515)
Q Consensus 450 g~~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 504 (515)
+.+++|.+...... ......+.+++....+..++. .++||++++.+.+..++.+
T Consensus 454 ~~i~ap~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~lpet~~~~l~~t~~~~~ 508 (521)
T KOG0255|consen 454 GSILAPLFPLLLRQ-MFPLLGLILFGWLALLLGLLSLLLLPETKGKPLPGTLLDAE 508 (521)
T ss_pred HHHHHHHHHHHHhh-hcccchHHHHHHHHHHHHHHHHhcCcccCCCCCchhHHHHH
Confidence 99999998865543 333333333455555555555 6899999988766554444
No 63
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.98 E-value=6.8e-29 Score=240.66 Aligned_cols=378 Identities=14% Similarity=0.041 Sum_probs=242.6
Q ss_pred hhHHHHHH-HHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhh
Q 010212 19 WYHFTAIV-IAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGR 97 (515)
Q Consensus 19 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Gr 97 (515)
+.++..+. .+.+..+...++.....+.+|.+.+++ +.+.++.++..+++.+++.++++++|+++||+||
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~i~~~~----------~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Gr 80 (413)
T PRK15403 11 HAATLFFPMALILYDFAAYLTTDLIQPGIINVVRDF----------NADVSLAPASVSLYLAGGMALQWLLGPLSDRIGR 80 (413)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHh----------CCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCc
Confidence 33344333 334445667778888899999999999 9999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHH
Q 010212 98 KRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGIL 177 (515)
Q Consensus 98 r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~ 177 (515)
|++++.+..++++++++++++++ ++.++++|+++|++.+...+...+++.|++|+++|++++++...+..+|..
T Consensus 81 r~~l~~~~~~~~~~~~~~~~a~~------~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (413)
T PRK15403 81 RPVLITGALIFTLACAATLFTTS------MTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPI 154 (413)
T ss_pred hHHHHHHHHHHHHHHHHHHHcCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998 899999999999998876777788899999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHH-HHhcCCchhhHHHHhccHHHHHHH
Q 010212 178 SGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYW-RMKMPETARYTALVAKNAKQAAAD 256 (515)
Q Consensus 178 ~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~-~~~~~e~p~~~~~~~~~~~~~~~~ 256 (515)
+||++++.+.+ ..|||+.|++.++..++..+. .+.+||+++. . +++. +....
T Consensus 155 ~g~~lg~~l~~-----------------------~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~~--~-~~~~-~~~~~ 207 (413)
T PRK15403 155 IGPLSGAALMH-----------------------FVHWKVLFAIIAVMGLIAFVGLLLAMPETVKR--G-AVPF-SAKSV 207 (413)
T ss_pred HHHHHHHHHHH-----------------------hcCHHHHHHHHHHHHHHHHHHHHHhCCCCccc--c-CCCC-ChHHH
Confidence 99999998853 345999999977776665543 4567887532 0 0000 00000
Q ss_pred HHHHHHhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhHh-cccCCcccchh
Q 010212 257 MSKVLQVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTAI-GWIPKAKTMNA 335 (515)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 335 (515)
.++.++.++++ .++...+.........+....+.|.++++. |+++...+.
T Consensus 208 --------------------~~~~~~ll~~~-------~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl-- 258 (413)
T PRK15403 208 --------------------LRDFRNVFRNR-------LFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAW-- 258 (413)
T ss_pred --------------------HHHHHHHHcCH-------HHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHH--
Confidence 00111122221 223333333344445556666778777663 554443221
Q ss_pred HHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHh
Q 010212 336 IEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFS 415 (515)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (515)
.......+.+++..+.+.+.++..+++.......+..++..++....... .+..+.......+. +.+
T Consensus 259 ----------~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~--~~~~~~~~~~~~l~-~~G 325 (413)
T PRK15403 259 ----------TQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLW--PHVWLWSVLGTSLY-AFG 325 (413)
T ss_pred ----------HHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHc--cccHHHHHHHHHHH-HHH
Confidence 33344445555556666665444443433322223333333322211001 11111112222222 222
Q ss_pred hcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCchHHHHHHHHHHHHHHH
Q 010212 416 NFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSGVKKALLILGGANFLGML 483 (515)
Q Consensus 416 ~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~ 483 (515)
.....|......-+. ....+|++.++.+.....+..+++...+++.+. +-...+...++++.+...
T Consensus 326 ~~~~~p~~~~~al~~-~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~ 391 (413)
T PRK15403 326 IGLIFPTLFRFTLFS-NNLPKGTVSASLNMVILMVMAVSVEIGRWLWFN-GGRLPFHLLAVVAGVIVV 391 (413)
T ss_pred HHHHhHHHHHHHhcc-CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCchHHHHHHHHHHHHHH
Confidence 221233333222111 123479999999999999999999999988765 555666655555444433
No 64
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.97 E-value=2.4e-30 Score=247.36 Aligned_cols=346 Identities=19% Similarity=0.263 Sum_probs=244.5
Q ss_pred HHhHHHHHHhhhHHHHHHh-hhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHH
Q 010212 29 GMGFFTDAYDLFCISLVTK-LLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMM 107 (515)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~ 107 (515)
+++.+...++.....+..| .+.+++ |.+..+.+++.+.+.++..+++++.|+++||+|||+++..+.++
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~----------~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~ 71 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEEL----------GLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLL 71 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCS----------TTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHcc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhh
Confidence 4566777888888899999 888999 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 010212 108 MVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVS 187 (515)
Q Consensus 108 ~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~ 187 (515)
.+++.++..++++ ++.+++.|++.|++.+...+...+++.|++|+++|++++++...+.++|.++++.+++.+.
T Consensus 72 ~~~~~~~~~~~~~------~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~ 145 (352)
T PF07690_consen 72 FALGSLLLAFASN------FWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLI 145 (352)
T ss_dssp HHHHHHHHHHHCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred hhhHHHHhhhhhh------HHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhh
Confidence 9999777777666 6799999999999999999999999999999999999999999999999999999999883
Q ss_pred HhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHH-HHhcCCchhhHHHHhccHHHHHHHHHHHHHhhhh
Q 010212 188 AAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYW-RMKMPETARYTALVAKNAKQAAADMSKVLQVELE 266 (515)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~-~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (515)
+..+||+.|++.++..++..++ .++++++|+.....++++++
T Consensus 146 -----------------------~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~-------------- 188 (352)
T PF07690_consen 146 -----------------------SYFGWRWAFLISAILSLIAAILFILFLPEPPPPRERESPKESE-------------- 188 (352)
T ss_dssp -----------------------CHCHHCCHHHHHHHHHHHHHHHHHCCC---STTTT--SSTTTT--------------
T ss_pred -----------------------hccccccccccccchhhhhhhhHhhhhhhcccccccccccccc--------------
Confidence 4566999999988887776553 34555554431111111000
Q ss_pred HhhhhHHHhhcCC-cchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHH-HhHhccc-CCcccchhHHHHHHHH
Q 010212 267 AEQEKVEQEKGKN-DFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDI-FTAIGWI-PKAKTMNAIEEVYKIA 343 (515)
Q Consensus 267 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~ 343 (515)
+.++++..+ .+...+++.. +......+.....+.....+.|.+ .+..+++ ..+ .
T Consensus 189 ----~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~------------~ 245 (352)
T PF07690_consen 189 ----SKKPKPLKPGFKSLFKNPVL-------WILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQ------------A 245 (352)
T ss_dssp ------HHHCCCH-CTHHHHHHCC-------HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHH------------H
T ss_pred ----cccccccccccccccccchh-------hhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHH------------H
Confidence 000000011 1222222211 122222223333455566667766 3445555 121 2
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccc
Q 010212 344 RAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTT 423 (515)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (515)
........+..+++.++.+++.||+++|+..........+..+.+...... .+...... ..+..+.......+..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-~~~~~g~~~~~~~~~~ 320 (352)
T PF07690_consen 246 GLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFS----SSPVWLII-ALFLIGFGFGIVFPIL 320 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHH----CHHHHHHH-HHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHh----hhHHHHHH-HHHHHHHHHHHHHHHH
Confidence 224555666677778899999999998877777666666666555543311 11222222 2333333333346778
Q ss_pred cccccccCchhhhhhhhHHHHHHhhhhHHHHH
Q 010212 424 FVVPAEIFPARLRSTCHGISAASGKAGAIVGA 455 (515)
Q Consensus 424 ~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~ 455 (515)
.++..|..|++++|++.|+.+...+++..++|
T Consensus 321 ~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 321 FSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 88999999999999999999999999999987
No 65
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.97 E-value=1.1e-28 Score=239.04 Aligned_cols=354 Identities=14% Similarity=0.126 Sum_probs=232.3
Q ss_pred HHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHH
Q 010212 28 AGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMM 107 (515)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~ 107 (515)
..+..+..........+.+|.+.+++ +.+..+.++..+.+.++..+++++.|+++||+|||+.+..+.++
T Consensus 8 ~~~~~~~~~~~~~~~~~~lp~~~~~~----------~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~ 77 (392)
T PRK10473 8 SFALVLLYPAGIDMYLVGLPRIAADL----------NASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAAL 77 (392)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHh----------CCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHH
Confidence 33344444555556668899999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 010212 108 MVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVS 187 (515)
Q Consensus 108 ~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~ 187 (515)
..++.+++.++++ ++.+++.|+++|++.+...+...+++.|++|+++|+++.++.+....+|..++|.+++.+.
T Consensus 78 ~~i~~~~~~~~~~------~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~ 151 (392)
T PRK10473 78 FIIASLLCSLAET------SSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIM 151 (392)
T ss_pred HHHHHHHHHHhCc------HHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999888 7889999999999999888999999999999999999999999999999999999988874
Q ss_pred HhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHH-HHHHhcCCchhhHHHHhccHHHHHHHHHHHHHhhhh
Q 010212 188 AAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTY-YWRMKMPETARYTALVAKNAKQAAADMSKVLQVELE 266 (515)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~-~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (515)
+..+||+.|++.++..++.. +..+++||+++. . ++++++..
T Consensus 152 -----------------------~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~-~~~~~~~~------------ 193 (392)
T PRK10473 152 -----------------------LKFPWQSLFYTMAAMGILVLLLSLFILKETRPA--R-APAASSKP------------ 193 (392)
T ss_pred -----------------------hCcChHHHHHHHHHHHHHHHHHHHHHcCCCCCc--c-cCCccchH------------
Confidence 34569999999776665543 344567776432 1 01000000
Q ss_pred HhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHh-HhcccCCcccchhHHHHHHHHHH
Q 010212 267 AEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFT-AIGWIPKAKTMNAIEEVYKIARA 345 (515)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 345 (515)
++.++.++++.... ......+.. ........+.|.++. +.|+++.. ...
T Consensus 194 -----------~~~~~~~~~~~~~~---~~~~~~~~~----~~~~~~~~~~~~~~~~~~g~~~~~------------~~~ 243 (392)
T PRK10473 194 -----------RENSESLLNRFFLS---RLVITTLSV----TVILTFVNTSPVLLMEQMGFSRGE------------YAI 243 (392)
T ss_pred -----------HHHHHHHhCHHHHH---HHHHHHHHH----HHHHHHHHhCHHHHHHHcCCCHHH------------HHH
Confidence 00011112211111 111111111 111122233444443 34544322 112
Q ss_pred HHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccc
Q 010212 346 QTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFV 425 (515)
Q Consensus 346 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (515)
......++.+++.++.+++.||+|||+.+..+..+..++.+++..... .........+...+...+. +. .
T Consensus 244 ~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~~g~~~~~-~~--~ 313 (392)
T PRK10473 244 IMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPS-------HAVSLFGITLICAGFSVGF-GV--A 313 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHh-HH--H
Confidence 445566777888899999999999999988888777776666554331 1111121112111111111 11 2
Q ss_pred cccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCchHHHHHHHHHH
Q 010212 426 VPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSGVKKALLILGGAN 478 (515)
Q Consensus 426 ~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~~~~~~~~~~~ 478 (515)
...+..|.+.|+ |.......++..+++.+.+.+.+..|+.......+...
T Consensus 314 ~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~g~~~~~~~~~~~~ 363 (392)
T PRK10473 314 MSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVLGISAWNMLIGILI 363 (392)
T ss_pred HHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHH
Confidence 223444544443 44445556777778888888887777765444444433
No 66
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.97 E-value=4e-30 Score=246.97 Aligned_cols=391 Identities=14% Similarity=0.135 Sum_probs=257.8
Q ss_pred HHHHHHHHHHhHHHHHHhhhHHHHH-HhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhh
Q 010212 21 HFTAIVIAGMGFFTDAYDLFCISLV-TKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKR 99 (515)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~ 99 (515)
.+.++..+++.++....+...++-. +..+.+|. +....+.+.+.++++++++++.+++|.+.||++..+
T Consensus 43 dl~i~~~~~~~y~~~~~d~~si~~a~l~g~~edl----------~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~ 112 (495)
T KOG2533|consen 43 DLFILPFLCYLYFHAYLDKSSIVNASLSGLKEDL----------KLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSK 112 (495)
T ss_pred HHHHHHHHHHHHHHHhcchhcchhHHHcCCcccc----------chhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHH
Confidence 3445566666677777777655432 34455666 888999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHH
Q 010212 100 VYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSG 179 (515)
Q Consensus 100 ~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g 179 (515)
.+....+++++..++.....| ++.+++.|++.|+.++..+|....+++.|+.++||++.++++.+..++|.++|
T Consensus 113 ~l~~~~~~w~~~~~~~~~~~s------~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~g 186 (495)
T KOG2533|consen 113 GLSVSGILWGLFGFLTAAVHS------FPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFG 186 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHhh------hHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHH
Confidence 999999999999988888888 89999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHH-HHHHHHhcCCchhhHHHHhccHHHHHHHHH
Q 010212 180 GMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALL-TYYWRMKMPETARYTALVAKNAKQAAADMS 258 (515)
Q Consensus 180 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~-~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~ 258 (515)
.+++..+.+..+. ....||||.|++.+++.++ .++.++++|+.|... .-.+++|..-..+
T Consensus 187 gliA~g~~~~~~~-----------------~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~--~fl~~~ek~~~~~ 247 (495)
T KOG2533|consen 187 GLIAYGVFKLNGS-----------------GGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKA--WFLTDEEKELVVE 247 (495)
T ss_pred HHHHHHhhhhcCC-----------------CCcCCceeehhHHHHHHHHHHheEEEEecCChhhc--cccchHHHHHHHH
Confidence 9999987653332 3567899999997766665 566678899998731 1111111111011
Q ss_pred HHHHhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhH-hcccCCcccchhHH
Q 010212 259 KVLQVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTA-IGWIPKAKTMNAIE 337 (515)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 337 (515)
+..+. +....+++ ..+..+++.... ..+|...+..++.....++...++|.++++ .+++..+.+.
T Consensus 248 ~~~~~------~~~~~~~~-~~~~~~~~a~~d---p~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~---- 313 (495)
T KOG2533|consen 248 RLRES------PSGGIENK-FKWKGFKEALKD---PGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANL---- 313 (495)
T ss_pred HHHhc------cCCCcccc-cCHHHHHHHHhc---hhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhcc----
Confidence 11000 00000011 111112221111 246777788888888889999999999988 4466655444
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHHHHh----hchhhHHHHHHHHHHHHH-HHHHhhhhcccCCCchHHHHHHHHHHH
Q 010212 338 EVYKIARAQTLIALCSTVPGYWFTVALIDK----IGRFAIQLMGFFFMTVFM-FALAIPYHHWTLPDHRIGFVVLYSLTF 412 (515)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~----~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (515)
+.++..++++++.+++|+++|| ..+|........+..+.. +.+.... .........+..
T Consensus 314 --------ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~--------~~~~~~~~~~~~ 377 (495)
T KOG2533|consen 314 --------LSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIGAISLLAAA--------VLPGAYGAFLIG 377 (495)
T ss_pred --------ccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhc--------cchHHhHHHHhc
Confidence 7788888999999999999999 555555544444433333 2222111 111111111222
Q ss_pred HHhhcCccccccccccccCchhhh-hhhhHHHHHHhhhhHHHHHHHHHHh-hhccCchHHHHHHHH
Q 010212 413 FFSNFGPNTTTFVVPAEIFPARLR-STCHGISAASGKAGAIVGAFGFLYL-ADTSGVKKALLILGG 476 (515)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~p~~~~-~~~~g~~~~~~~~g~~i~~~~~~~l-~~~~g~~~~~~~~~~ 476 (515)
........+......++....+.| -+..+........+++++|.+.... ...+++...|....+
T Consensus 378 ~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~y~~~~~f~~~~~ 443 (495)
T KOG2533|consen 378 PYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDAPRYGWGAVFYMLVA 443 (495)
T ss_pred chhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccCcchhhhhHHHHHHH
Confidence 221222233444555555544444 4444444455555555555554433 334577777744433
No 67
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.97 E-value=2.3e-28 Score=236.17 Aligned_cols=351 Identities=15% Similarity=0.145 Sum_probs=232.9
Q ss_pred hHHHHHH-hhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhc
Q 010212 40 FCISLVT-KLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLS 118 (515)
Q Consensus 40 ~~~~~~~-~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~ 118 (515)
....+.. +.+.+++ |.+..+.|++.+...++..+.+++.|+++||+|||+++..+.++.+++.+++.++
T Consensus 27 ~~~~~~~~~~~~~~~----------g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~ 96 (400)
T PRK11646 27 FVVFPLISIRFVDQL----------GWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIA 96 (400)
T ss_pred HHHHHHHHHHHHHHh----------CCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHh
Confidence 3334444 4567788 9999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCc
Q 010212 119 FGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFPAPI 198 (515)
Q Consensus 119 ~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~~~~ 198 (515)
++ ++.+++.|+++|++.+...+...+++.|++|+++|++++++.....++|..+||.+++.+.
T Consensus 97 ~~------~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~----------- 159 (400)
T PRK11646 97 HE------PWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL----------- 159 (400)
T ss_pred cc------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------
Confidence 88 8999999999999998888999999999999999999999999999999999999999985
Q ss_pred cCCCCCCccccCCCchHHHHHHHhHHHHHHHH-HHHHhcCCchhhHHHHhccHHHHHHHHHHHHHhhhhHhhhhHHHhhc
Q 010212 199 YSANPAASTVPEADYIWRIILMFGAIPALLTY-YWRMKMPETARYTALVAKNAKQAAADMSKVLQVELEAEQEKVEQEKG 277 (515)
Q Consensus 199 ~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~-~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (515)
.++||+.|++.++..++.. +..++.||.++. +.+++..
T Consensus 160 -------------~~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~~-----~~~~~~~----------------------- 198 (400)
T PRK11646 160 -------------QYDFRLVCATGAVLFVLAAAFNAWLLPAYKLS-----TVRTPVR----------------------- 198 (400)
T ss_pred -------------HhhHHHHHHHHHHHHHHHHHHHHHhCCccccc-----ccchhhH-----------------------
Confidence 2359999998776665543 334455553210 0000000
Q ss_pred CCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccchhHHHHHHHHHHHHHHHHhhhh-h
Q 010212 278 KNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKIARAQTLIALCSTV-P 356 (515)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 356 (515)
++.++.++++. ++......+...........+.|.+.++.+..+.. .+. ......+..+ .
T Consensus 199 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-----------~g~-l~~~~~~~~~~~ 259 (400)
T PRK11646 199 EGMTRVLRDKR-------FVTYVLTLTGYYMLAVQVMLMLPIMVNDIAGSPSA-----------VKW-MYAIEACLSLTL 259 (400)
T ss_pred HHHHHHHcCch-------HHHHHHHHHHHHHHHHHHHHhhhhhHHhhcCCchH-----------HHH-HHHHHHHHHHHH
Confidence 00111112111 11111111111122222345667777765443322 222 2222222233 2
Q ss_pred HHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchhhh
Q 010212 357 GYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLR 436 (515)
Q Consensus 357 ~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 436 (515)
..+...+..||++.++.+..+..+.+++..++.... +.+ .+.......+.......|...+++.|..|++.|
T Consensus 260 ~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~-------~~~-~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~ 331 (400)
T PRK11646 260 LYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVS-------NLQ-QLFTLICLFYIGSIIAEPARETLSASLADARAR 331 (400)
T ss_pred HHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhh-------hHH-HHHHHHHHHHHHHHHHHccHHHHHHhcCCcccc
Confidence 333344444556666666666666666655544322 112 222222222222223345666788899999999
Q ss_pred hhhhHHHHHHhhhhHHHHHHHHHHhhhccC----chHHHHHHHHHHHHHHHHH
Q 010212 437 STCHGISAASGKAGAIVGAFGFLYLADTSG----VKKALLILGGANFLGMLFT 485 (515)
Q Consensus 437 ~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g----~~~~~~~~~~~~~~~~~~~ 485 (515)
|+++|+.+....+|..++|.+.|.+.|..+ ....+...+.+++++.+..
T Consensus 332 g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (400)
T PRK11646 332 GSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLAL 384 (400)
T ss_pred hhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998642 3455655555555555443
No 68
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.97 E-value=1.1e-27 Score=231.17 Aligned_cols=382 Identities=11% Similarity=-0.023 Sum_probs=251.8
Q ss_pred HHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHH
Q 010212 25 IVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMT 104 (515)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~ 104 (515)
+..+++.++..++.....++..|.+++++ |++..+.|++.+.+.+++.+++++.|++.||+|||+++..+
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~~~~----------~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g 74 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQQAF----------TLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLG 74 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHh----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHH
Confidence 44556677778888888899999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhc---CCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHH
Q 010212 105 LMMMVICSLASGLS---FGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGM 181 (515)
Q Consensus 105 ~~~~~i~~~~~~~~---~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~ 181 (515)
..+++++.+++..+ ++ ++.+++.|++.|+|.|...+....++.+..|+++|++.+++.+...++|..+|+.
T Consensus 75 ~~l~~~g~~l~~~~~~~~~------~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~ 148 (410)
T TIGR00885 75 LFLYALGAFLFWPAAEIMN------YTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMV 148 (410)
T ss_pred HHHHHHHHHHHHHHHhhcc------HHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999886543 45 8999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcCCCCCccCC-CCCCc--cccCCCchHHHHHHHhHHHHHHHHHHHHh--cCCchhhHHHHhccHHHHHHH
Q 010212 182 VAIIVSAAFKANFPAPIYSA-NPAAS--TVPEADYIWRIILMFGAIPALLTYYWRMK--MPETARYTALVAKNAKQAAAD 256 (515)
Q Consensus 182 l~~~l~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~wr~~f~~~~~~~~~~~~~~~~--~~e~p~~~~~~~~~~~~~~~~ 256 (515)
++..+............+.. .+... ....+..+||++|++.+++.++..+...+ .||.++. ++ ++.
T Consensus 149 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~~-----~~-~~~--- 219 (410)
T TIGR00885 149 VAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPALNHS-----DA-KQI--- 219 (410)
T ss_pred HHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc-----cc-ccc---
Confidence 99888532110000000000 00000 00012357999999877666554444333 3332110 00 000
Q ss_pred HHHHHHhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccchhH
Q 010212 257 MSKVLQVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAI 336 (515)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (515)
+..++.++.++++.. +...+..++..........+.+.+.++.+...+. .
T Consensus 220 ------------------~~~~~~~~~~~~~~~-------~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~-----~ 269 (410)
T TIGR00885 220 ------------------SFSASLSRLARIRHY-------REGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTA-----G 269 (410)
T ss_pred ------------------cchhhHHHHHhChhH-------HHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCH-----H
Confidence 000001111122111 1122222233333444455666665543322111 0
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhh
Q 010212 337 EEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSN 416 (515)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (515)
.+............+|+++++++.||+++|+.+.+...+..++.++..... +.. ....+.+.. ++.
T Consensus 270 -----~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~-------~~~-~~~~l~~~g-lf~ 335 (410)
T TIGR00885 270 -----FAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAG-------GHV-GLYCLTLCS-AFM 335 (410)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcC-------ChH-HHHHHHHHH-HHH
Confidence 111133334456678999999999999999988887777776666655432 112 222222333 333
Q ss_pred cCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhcc------CchHHHHHHHHH
Q 010212 417 FGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTS------GVKKALLILGGA 477 (515)
Q Consensus 417 ~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~------g~~~~~~~~~~~ 477 (515)
...+|..++...+..+++.+..+.++...+ +|+.+.|.+.|.+.|.. +++.+|++-..+
T Consensus 336 s~~fp~i~sl~~~~~g~~~~~~s~~l~~~~--~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~ 400 (410)
T TIGR00885 336 SLMFPTIYGIALKGLGQDTKYGAAGLVMAI--IGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLC 400 (410)
T ss_pred HHHHHHHHHHHHhhhhhhhhhhHHHHHHHH--hccchHHHHHHHHHHHhcccccCccchHHHHHHHH
Confidence 334588889999999877655555555544 99999999999999953 466777654333
No 69
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.97 E-value=4.3e-28 Score=233.90 Aligned_cols=336 Identities=16% Similarity=0.169 Sum_probs=224.7
Q ss_pred hhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhh
Q 010212 38 DLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGL 117 (515)
Q Consensus 38 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~ 117 (515)
....+.+..|.+.+++ |.+.++.+++.+++.++..++.+++|+++||+|||+++..+.++.+++.+++.+
T Consensus 6 ~~~~~~p~~~~~~~~~----------~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~ 75 (377)
T PRK11102 6 AIDMYLPALPVIAADF----------GVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACAL 75 (377)
T ss_pred HHHHHhccHHHHHHHh----------CCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHH
Confidence 3455678899999999 999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCC
Q 010212 118 SFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFPAP 197 (515)
Q Consensus 118 ~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~~~ 197 (515)
+++ ++.+++.|+++|++.+...+...+++.|++|+++|++++++.+....+|..+++.+++.+.+.
T Consensus 76 ~~~------~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~-------- 141 (377)
T PRK11102 76 AQT------IDQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVW-------- 141 (377)
T ss_pred Hcc------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------
Confidence 988 899999999999999998899999999999999999999999999999999999999988643
Q ss_pred ccCCCCCCccccCCCchHHHHHHHhHHHHHHHH-HHHHhcCCchhhHHHHhccHHHHHHHHHHHHHhhhhHhhhhHHHhh
Q 010212 198 IYSANPAASTVPEADYIWRIILMFGAIPALLTY-YWRMKMPETARYTALVAKNAKQAAADMSKVLQVELEAEQEKVEQEK 276 (515)
Q Consensus 198 ~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~-~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (515)
.+||+.|++.++..++.. ...+++||+++.. + +++.+..+ .
T Consensus 142 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~--------------------~ 183 (377)
T PRK11102 142 ---------------FSWHAIFWVLALAAILAAALVFFFIPETLPKE--R-RQPFHLRT--------------------T 183 (377)
T ss_pred ---------------cChHHHHHHHHHHHHHHHHHHHHhCCccCccc--c-cCCCChHH--------------------H
Confidence 459999998777666543 4445677764321 0 00000000 0
Q ss_pred cCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhH-hcccCCcccchhHHHHHHHHHHHHHHHHhhhh
Q 010212 277 GKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTA-IGWIPKAKTMNAIEEVYKIARAQTLIALCSTV 355 (515)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (515)
.++.++.++++. .+...+..+......+....+.|.++.+ .++++.+. ........++.+
T Consensus 184 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~------------g~~~~~~~~~~~ 244 (377)
T PRK11102 184 IRNFASLFRHKR-------VLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNF------------GYYFALNIVFLF 244 (377)
T ss_pred HHHHHHHHcChH-------HHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHH------------HHHHHHHHHHHH
Confidence 000011111111 1111222222222333333344544433 45544331 225556677788
Q ss_pred hHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchhh
Q 010212 356 PGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARL 435 (515)
Q Consensus 356 ~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 435 (515)
++.++.+++.||+|||+.+..+..+..+..+.+...... +...+.......+....... ..+.......|..| +.
T Consensus 245 ~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~ 319 (377)
T PRK11102 245 VMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALL---DLGFWALVVGVAAFVGCVSM-ISSNAMAVILDEFP-HM 319 (377)
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHH---hhhHHHHHHHHHHHHHHHHH-hhHHHHHHHhcccc-cc
Confidence 889999999999999998887776544433332221100 01112222222222222221 22333455677776 78
Q ss_pred hhhhhHHHHHHhh-hhHHHHHHHHH
Q 010212 436 RSTCHGISAASGK-AGAIVGAFGFL 459 (515)
Q Consensus 436 ~~~~~g~~~~~~~-~g~~i~~~~~~ 459 (515)
++++.++.+.... ++..+++.+.+
T Consensus 320 ~g~~~~~~~~~~~~~g~~~g~~~~~ 344 (377)
T PRK11102 320 AGTASSLAGTLRFGIGAIVGALLSL 344 (377)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999877654 45556665543
No 70
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.97 E-value=9.5e-28 Score=231.91 Aligned_cols=362 Identities=11% Similarity=0.062 Sum_probs=226.4
Q ss_pred HHHHHHhhhHHHHHHhh-hhhhhhccCCCCCCCCCchhHHHHHHHHHHH-HHHHHHHHHhhhhhhhhhhhHH-HHHHHHH
Q 010212 32 FFTDAYDLFCISLVTKL-LGRIYYYKEGSDSPGTLPDNVASAVNGVALC-GTLAGQLFFGWLGDKMGRKRVY-GMTLMMM 108 (515)
Q Consensus 32 ~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l-~~~i~~~~~G~l~dr~Grr~~l-~~~~~~~ 108 (515)
.+..........+.+|. +.+++ +.+.++.|++.+...+ +..++.+++++ +||+||||.+ ..+.++.
T Consensus 24 ~~~~~~~~~~~~p~~~~~l~~~~----------~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~ 92 (393)
T PRK15011 24 AFLTGIAGALQTPTLSIFLTDEV----------HARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLG 92 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHH
Confidence 44444554555565555 67788 9999999999876655 66666655666 9999999875 5566666
Q ss_pred HHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccch--hHHHHHHHHHHHHHHHHHHHHHHH
Q 010212 109 VICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRG--AFIAAVFAMQGFGILSGGMVAIIV 186 (515)
Q Consensus 109 ~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~--~~~~~~~~~~~~G~~~g~~l~~~l 186 (515)
+++..+.+++++ ++.+++.+.+.|...+...+...+++.|+.++++|. ...++.+.+.++|.++||++++.+
T Consensus 93 ~~~~~~~~~~~~------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l 166 (393)
T PRK15011 93 VLACTLFAWNRN------YFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYAL 166 (393)
T ss_pred HHHHHHHHHhhH------HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 777888888887 677665555544444566788888889988776553 445788889999999999999998
Q ss_pred HHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHH-HHHHhcCCchhhHHHHhccHHHHHHHHHHHHHhhh
Q 010212 187 SAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTY-YWRMKMPETARYTALVAKNAKQAAADMSKVLQVEL 265 (515)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~-~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (515)
.+ ..|||..|++.++..++.. ...+++||.++.. + ++ ++
T Consensus 167 ~~-----------------------~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~-~~------------- 206 (393)
T PRK15011 167 AM-----------------------GFSFTVMYLSAAVAFIVCGVMVWLFLPSMRKEL--P-LA-TG------------- 206 (393)
T ss_pred HH-----------------------hcChHHHHHHHHHHHHHHHHHHHhhcCccCCCC--c-cc-cc-------------
Confidence 63 3469999999777666544 4445678765321 0 00 00
Q ss_pred hHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhH-hcccCCcccchhHHHHHHHHH
Q 010212 266 EAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTA-IGWIPKAKTMNAIEEVYKIAR 344 (515)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 344 (515)
+ .+.. ++. ++....... ........++....+.|.++++ .++++.. .+.
T Consensus 207 -----~-----~~~~----~~~--~~~~~~~~~---~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~-----------~g~ 256 (393)
T PRK15011 207 -----T-----LEAP----RRN--RRDTLLLFV---ICTLMWGTNSLYIINMPLFIINELHLPEKL-----------AGV 256 (393)
T ss_pred -----c-----cccc----ccc--cccHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHcCCCHHH-----------HHH
Confidence 0 0000 000 010011111 1111112233334456666644 4544332 122
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCcccccc
Q 010212 345 AQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTF 424 (515)
Q Consensus 345 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (515)
......+..+++.++.|+++||++||+.+..+.....+....+.... +.+..+....+.....+. ..+...
T Consensus 257 -~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~l~~~~l~~~~~g~-~~~~~~ 327 (393)
T PRK15011 257 -MMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAH-------SPAILLGLQLLNAIYIGI-LGGIGM 327 (393)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHh-------hHHHHHHHHHHHHHHHHH-HHHHHH
Confidence 33334455677888999999999999877766554444332222111 122222211111111111 112334
Q ss_pred ccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHHhccc
Q 010212 425 VVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSGVKKALLILGGANFLGMLFTFLVPE 490 (515)
Q Consensus 425 ~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 490 (515)
.+..|..|+ .+++++++.+...++|..++|.+.|.+.|..||+..+.+.+++.+++.+..++.||
T Consensus 328 ~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 392 (393)
T PRK15011 328 LYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRIKD 392 (393)
T ss_pred HHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcC
Confidence 556788885 59999999999999999999999999999889999998888888887777766654
No 71
>PRK10054 putative transporter; Provisional
Probab=99.97 E-value=2.2e-28 Score=235.82 Aligned_cols=362 Identities=11% Similarity=0.063 Sum_probs=240.5
Q ss_pred hHHHHHHhhhHHHHHH-hhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHH
Q 010212 31 GFFTDAYDLFCISLVT-KLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMV 109 (515)
Q Consensus 31 ~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~ 109 (515)
..+..........+.+ +.+.+++ |.+..+.|++.+.+.++..+++++.|+++||+|||+++..+.++.+
T Consensus 15 ~~~~~~~g~~~~~~~l~~~l~~~~----------g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~ 84 (395)
T PRK10054 15 SSLLLTIGRGATLPFMTIYLSRQY----------SLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFA 84 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHH
Confidence 3444455555555555 4566788 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 010212 110 ICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAA 189 (515)
Q Consensus 110 i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~ 189 (515)
++.++.+++++ ++.++++|++.|.+.+...+...++..|.+|+++|++++++.....++|.++||.+++.+..
T Consensus 85 ~~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~- 157 (395)
T PRK10054 85 SGFIAIPLVNN------VTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM- 157 (395)
T ss_pred HHHHHHHHHhH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 99999999888 78888899999988787788899999999999999999999999999999999999998842
Q ss_pred hhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHH-HHHhcCCchhhHHHHhccHHHHHHHHHHHHHhhhhHh
Q 010212 190 FKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYY-WRMKMPETARYTALVAKNAKQAAADMSKVLQVELEAE 268 (515)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~-~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (515)
.+|+..|++.++..++..+ ..+++||+++. . +++++.
T Consensus 158 -----------------------~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~--~--~~~~~~--------------- 195 (395)
T PRK10054 158 -----------------------QSINLPFWLAAICSAFPLVFIQIWVQRSEKA--I--ATETGS--------------- 195 (395)
T ss_pred -----------------------hccCcHHHHHHHHHHHHHHHHHHHHhccccc--c--ccchhh---------------
Confidence 3599999987776666543 33445554321 0 000000
Q ss_pred hhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccchhHHHHHHHHHHHHH
Q 010212 269 QEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKIARAQTL 348 (515)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (515)
..+.++.++++.. +......++..........+.+.+..... ..+ .+....+ ....
T Consensus 196 --------~~~~~~~~~~~~~-------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~----~~~~~~g-~~~~ 251 (395)
T PRK10054 196 --------VWSPSVLLQDKAL-------LWFTCSGFLASFVSGAFASCISQYVMVVA----DSD----FAEKVVA-VVLP 251 (395)
T ss_pred --------hhhhhhhccCcee-------hHHHHHHHHHHHHHHHhhhhHHHHHHHhc----ccc----hHHHHHH-HHHH
Confidence 0000111222211 11112222211222222223333332210 000 0111112 2344
Q ss_pred HHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCcccccccccc
Q 010212 349 IALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPA 428 (515)
Q Consensus 349 ~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (515)
...+..+...+..+++.||.++|+.+..+..+..++...+.... +......+.....+.+.....|...+.+.
T Consensus 252 ~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~g~~~~~p~~~~~~~ 324 (395)
T PRK10054 252 VNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSG-------NSLLLWGMSAAVFTVGEIIYAPGEYMLID 324 (395)
T ss_pred hhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcc-------hHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 44445555667888999999999988888777776665554321 12222222333333333333456667788
Q ss_pred ccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCchHHHHHHHHHHHHHHH
Q 010212 429 EIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSGVKKALLILGGANFLGML 483 (515)
Q Consensus 429 ~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~ 483 (515)
+..|++.++++.+..+ ..++|..+||.+.|.+.|..|+...+.+.+.+..+..+
T Consensus 325 ~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~ 378 (395)
T PRK10054 325 HIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWL 378 (395)
T ss_pred HhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHH
Confidence 8999999999988765 67789999999999999999988888766554444433
No 72
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.97 E-value=3.1e-27 Score=229.01 Aligned_cols=352 Identities=15% Similarity=0.121 Sum_probs=232.3
Q ss_pred HHHHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHH
Q 010212 22 FTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVY 101 (515)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l 101 (515)
++.+.+..+..+...+......+..|.+.+++ |.++.+.+++.+.+.++..++++++|+++||+|||+++
T Consensus 7 ~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~----------~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~ 76 (394)
T PRK11652 7 VNLLFMLVLLVAVGQMAQTIYVPAIADMARDL----------NVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVI 76 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHh----------CCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHH
Confidence 44445555555555666677788899999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHH
Q 010212 102 GMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGM 181 (515)
Q Consensus 102 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~ 181 (515)
..+..+..++.+++.++++ ++.+++.|++.|++.+...+....+..|++++++|+++.++...+..+|..++|.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~------~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 150 (394)
T PRK11652 77 LVGMSIFILGTLVALFAHS------LTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPL 150 (394)
T ss_pred HHHHHHHHHHHHHHHHHcc------HHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999888 8999999999999988888888889999999999999999999999999999999
Q ss_pred HHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHH-HHHHHhcCCchhhHHHHhccHHHHHHHHHHH
Q 010212 182 VAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLT-YYWRMKMPETARYTALVAKNAKQAAADMSKV 260 (515)
Q Consensus 182 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~-~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~ 260 (515)
+++.+. +..+||+.|++.++..++. .+..++.||+++.. +++++..+
T Consensus 151 i~~~l~-----------------------~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~----- 198 (394)
T PRK11652 151 IGGLLT-----------------------TLFGWRACYLFLLLLGAGVTFSMARWMPETRPAD----ARRTRVLA----- 198 (394)
T ss_pred HHHHHH-----------------------hccChHHHHHHHHHHHHHHHHHHHHhCCccCccc----cchhHHHH-----
Confidence 999885 3456999999876665543 44456678865431 11000000
Q ss_pred HHhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhH-hcccCCcccchhHHHH
Q 010212 261 LQVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTA-IGWIPKAKTMNAIEEV 339 (515)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 339 (515)
..++.++++..+ ..+...+..+ ........+.+.++++ .|+++..
T Consensus 199 ------------------~~~~~~~~~~~~----~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~~--------- 244 (394)
T PRK11652 199 ------------------SYRTLLSNRRFN----CYLLMLIGTL---AGIAVFEACSGVLMGAVLGLSSMT--------- 244 (394)
T ss_pred ------------------HHHHHHcChHHH----HHHHHHHHHH---HHHHHHHHhChHHHHHHcCCCHHH---------
Confidence 001111222111 1111111111 1122222233444444 4444322
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCc
Q 010212 340 YKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGP 419 (515)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (515)
.+ .......++.+++.++.+++.||.+++.... .....+..+.+.... .......+...... ...+......
T Consensus 245 --~~-~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~g~~~~ 316 (394)
T PRK11652 245 --VS-ILFILPIPAAFFGAWFAGRPNKRFSTLMWQS--VICCLLAGLLMWIPG--WFGVMNVWTLLVPA-ALFFFGAGML 316 (394)
T ss_pred --HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHH--HhccccHHHHHHHH-HHHHHHHHHH
Confidence 11 1344556677777778888888887433222 222222212111111 00001122222222 2222222234
Q ss_pred cccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhc
Q 010212 420 NTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADT 464 (515)
Q Consensus 420 ~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~ 464 (515)
.+...++..|..| +.++++.++.+....+|..+++.+.+.+.+.
T Consensus 317 ~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~ 360 (394)
T PRK11652 317 FPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQT 360 (394)
T ss_pred HHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 5667777788887 6789999999999999999999999988654
No 73
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.97 E-value=3.8e-27 Score=226.79 Aligned_cols=360 Identities=11% Similarity=0.014 Sum_probs=247.5
Q ss_pred HHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHH----HH
Q 010212 28 AGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVY----GM 103 (515)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l----~~ 103 (515)
+.+.++..........|.+|.+.+++ |.|.+++|++.+++.+...++++++|+++||+|||+.. ..
T Consensus 9 l~~~~~~~~~~~~~~~p~l~~~l~~~----------g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~ 78 (382)
T TIGR00902 9 LALGFFGYFCAYGIFLPFFPAWLKGI----------GLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLAL 78 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 44556666677788889999999999 99999999999999999999999999999999985433 22
Q ss_pred HHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHH
Q 010212 104 TLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVA 183 (515)
Q Consensus 104 ~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~ 183 (515)
+..+..+ ..+..+++ ++.+++.|+++|.+.+...|...++..|+ +++|++..+....+.++|.+++|+++
T Consensus 79 ~~~l~~~--~~~~~~~~------~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~ 148 (382)
T TIGR00902 79 ASAIFAA--AFSAGAHN------AWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALF 148 (382)
T ss_pred HHHHHHH--HHHHhhhh------HHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHH
Confidence 2222222 23345666 89999999999999888889988887765 46789999999999999999999999
Q ss_pred HHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhcCCch-hhHHHHhccHHHHHHHHHHHHH
Q 010212 184 IIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKMPETA-RYTALVAKNAKQAAADMSKVLQ 262 (515)
Q Consensus 184 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p-~~~~~~~~~~~~~~~~~~~~~~ 262 (515)
+.+.+. .|||..|++..+..++.++. +.++|++ +. ++++ ++.
T Consensus 149 g~l~~~-----------------------~g~~~~f~~~~~~~~~~~~~-~~~~~~~~~~---~~~~-~~~--------- 191 (382)
T TIGR00902 149 GGLIGM-----------------------FDEQNILAILTAGLAFMLIG-FLIKPTIPPK---DAIP-EDE--------- 191 (382)
T ss_pred HHHHHH-----------------------cChhHHHHHHHHHHHHHHHH-HHcCCCCCCC---cccc-ccc---------
Confidence 999643 45999998865543333333 3334432 21 0000 000
Q ss_pred hhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccchhHHHHHHH
Q 010212 263 VELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKI 342 (515)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (515)
+++.++.++.+|++ .++......++..........+.|.++++.|.++...+
T Consensus 192 -----------~~~~~~~~~~l~~~-------~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~g~s~~~~g---------- 243 (382)
T TIGR00902 192 -----------SQGDSAFIALLKNP-------MNLRFLAAVCLIQGAHAAYYGFSAIYWQAAGISASATG---------- 243 (382)
T ss_pred -----------cccchhHHHHHcCh-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHhHHH----------
Confidence 00001112222222 12222333333334455555577777777776655422
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCcccc
Q 010212 343 ARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTT 422 (515)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (515)
. ......++.+++.++.+++.||+|+|+.+..+.+...+...++.... ..+.+....+..+.......+.
T Consensus 244 -~-l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~--------~~~~~~~~q~l~g~~~~~~~~~ 313 (382)
T TIGR00902 244 -L-LWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIE--------AFPLIFLLQILHCGTFAVCHLA 313 (382)
T ss_pred -H-HHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHh--------hHHHHHHHHHHHHHHHHHHHHH
Confidence 2 45567788888889999999999999999999888888877765433 2223333333333333333455
Q ss_pred ccccccccCchhhhhhhhHHHHH-HhhhhHHHHHHHHHHhhhccCchHHHHHHHHHHHHHHHH
Q 010212 423 TFVVPAEIFPARLRSTCHGISAA-SGKAGAIVGAFGFLYLADTSGVKKALLILGGANFLGMLF 484 (515)
Q Consensus 423 ~~~~~~~~~p~~~~~~~~g~~~~-~~~~g~~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~ 484 (515)
...++.+. |++.++++.++++. ...+|..++|.+.|.+.|..|+ ..|...+++.+++.++
T Consensus 314 ~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 314 AMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 66777887 88999999999874 5678999999999999999886 6677777777666544
No 74
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.97 E-value=4.9e-28 Score=232.64 Aligned_cols=357 Identities=18% Similarity=0.216 Sum_probs=233.4
Q ss_pred HHHHHhHHHHHHhhhHHHHHHhh-hhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHH
Q 010212 26 VIAGMGFFTDAYDLFCISLVTKL-LGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMT 104 (515)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~ 104 (515)
...+++++....+...+++..|. +.+++ |++..+.+++.+.+.+++.+++++.|+++||+|||+.+.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~ 73 (366)
T TIGR00886 4 FFSWFGFFLSFSVWFAFSPLAVQMIKDDL----------GLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLS 73 (366)
T ss_pred HHHHHHHHHHHHHHHHhHHhhhHHHHHHh----------CCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHH
Confidence 34566666777778888999995 88999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcC-CCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHH
Q 010212 105 LMMMVICSLASGLSF-GKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVA 183 (515)
Q Consensus 105 ~~~~~i~~~~~~~~~-~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~ 183 (515)
.++..++.+++++++ + ++.+++.|+++|++.+. .+....++.|++|+++|+++.++.....++|..+++.++
T Consensus 74 ~~~~~i~~~~~~~~~~~------~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~ 146 (366)
T TIGR00886 74 LLLLAIPCLWAGLAVQS------YSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVM 146 (366)
T ss_pred HHHHHHHHHHHHHHhhh------HHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHH
Confidence 999999999999998 7 89999999999998654 567789999999999999999999988889998888888
Q ss_pred HHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHH-HhHHH-HHHHHHHHHhcCCchhhHHHHhccHHHHHHHHHHHH
Q 010212 184 IIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILM-FGAIP-ALLTYYWRMKMPETARYTALVAKNAKQAAADMSKVL 261 (515)
Q Consensus 184 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~-~~~~~-~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~ 261 (515)
+.+......... .....+||+.|+ ..++. .++.++...+.+|+|+.. ++++ ++..+ +
T Consensus 147 ~~l~~~~~~~~~-------------~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~---~-- 205 (366)
T TIGR00886 147 PPIIGSLIFGAG-------------LPAHLAWGWAFVIVPAGILLLPALLIFFVGADTPPGK--PATG-KLSFK---G-- 205 (366)
T ss_pred HHHHHHHHhccc-------------ccccccccchhHHHHHHHHHHHHHHHHHhcccCCccc--ccch-hcccc---c--
Confidence 777654321000 012357999994 33433 334444455567765421 0000 00000 0
Q ss_pred HhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhH-hcccCCcccchhHHHHH
Q 010212 262 QVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTA-IGWIPKAKTMNAIEEVY 340 (515)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 340 (515)
+....+++..+..++.++++ .++...+..+......+....+.|.++++ .++++.+.
T Consensus 206 ------~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--------- 263 (366)
T TIGR00886 206 ------ARWSVGTGALGDQLKVFRDR-------HTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTA--------- 263 (366)
T ss_pred ------ccccccchhHHHHHHHHhcc-------chhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHH---------
Confidence 00000000000111122211 12222233333333445556666777655 35544331
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCcc
Q 010212 341 KIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPN 420 (515)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (515)
........+..+++.++.+++.||+|+|+....+......+..++..... .+.+.........+.....+.+ .
T Consensus 264 ---~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~~-~ 336 (366)
T TIGR00886 264 ---GAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLV---SPLSLAVFIVLFVALFFFSGAG-N 336 (366)
T ss_pred ---HHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCC---CcchHHHHHHHHHHHHHHhccc-c
Confidence 22445556677788889999999999988777766665555554443221 0001222222222222233332 3
Q ss_pred ccccccccccCchhhhhhhhHHHHHHhhhh
Q 010212 421 TTTFVVPAEIFPARLRSTCHGISAASGKAG 450 (515)
Q Consensus 421 ~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g 450 (515)
+..+....+..| +.+|+++|+.+..+++|
T Consensus 337 ~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 337 GSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred chhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 456677788887 68999999999988876
No 75
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.97 E-value=2.3e-27 Score=229.98 Aligned_cols=381 Identities=11% Similarity=0.057 Sum_probs=240.0
Q ss_pred hHHHHHHhhhHH-HHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhh-hhHHHHHHHHH
Q 010212 31 GFFTDAYDLFCI-SLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGR-KRVYGMTLMMM 108 (515)
Q Consensus 31 ~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Gr-r~~l~~~~~~~ 108 (515)
.++.++.....+ +++.+.+.+++ |.+.++.|++.+++.++..++++++|+++||+|| |+++.++.++.
T Consensus 10 ~~~~~~~~~~~~~~~l~~~l~~~~----------g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~ 79 (418)
T TIGR00889 10 MSFLQWFIWGSWLVTLGSYMSKTL----------HFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAG 79 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 344444445555 55566677778 9999999999999999999999999999999965 77888888888
Q ss_pred HHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhh--------hccccccchhHHHHHHHHHHHHHHHHH
Q 010212 109 VICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMS--------EYANKKTRGAFIAAVFAMQGFGILSGG 180 (515)
Q Consensus 109 ~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~--------e~~~~~~r~~~~~~~~~~~~~G~~~g~ 180 (515)
.++..+..+.++ ++.+++.|++.|++.+...+...++.. |......|.+..| .+|.++|+
T Consensus 80 ~~~~~~~~~~~~------~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~ 147 (418)
T TIGR00889 80 ALLLFFAAQVTT------PAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAM 147 (418)
T ss_pred HHHHHHHHHhcC------HHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHH
Confidence 888888888888 889999999999987776666655532 2222233445444 46888888
Q ss_pred HHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhcCCchhhHHHHhccHHHHHHHHHHH
Q 010212 181 MVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKMPETARYTALVAKNAKQAAADMSKV 260 (515)
Q Consensus 181 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~ 260 (515)
.+++.+. ....|+. |++.++..++..+..+++||+|+. .++++ .+..+
T Consensus 148 ~l~g~l~-----------------------~~~~~~~-f~~~~~~~~~~~~~~~~~~e~~~~--~~~~~-~~~~~----- 195 (418)
T TIGR00889 148 WAVSLLD-----------------------IELSNIQ-LYITAGSSALLGVFALTLPDIPVA--KSTAK-MSIKV----- 195 (418)
T ss_pred HHHHHhc-----------------------ccchhHH-HHHHHHHHHHHHHHHhcCCCCCCC--ccccc-cCHHH-----
Confidence 8888762 1123654 445444444444455678887632 11000 00000
Q ss_pred HHhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccchhHHHHH
Q 010212 261 LQVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEVY 340 (515)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (515)
....+.++.+|++.. +...+..++..........+.+.+.++.++++.... ....
T Consensus 196 --------------~~~~~~~~~~k~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~----~~~~ 250 (418)
T TIGR00889 196 --------------MLGLDAFILFKNKRM-------AIFFFFSMLLGAPLQITNIFGNGFLHEFGRNPEFAD----SFVV 250 (418)
T ss_pred --------------HhhhhHHHHhcCCCe-------eeHHHHHHHHHhHHHHHHHhHHHHHHHhcccccccc----hhhh
Confidence 000001111122211 112222222222223333555666666665543210 0000
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCcc
Q 010212 341 KIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPN 420 (515)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (515)
...........+..+++.+..+++.||+|+|+.+..+.++..++..++..... .........+..++.+.......
T Consensus 251 ~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~----~~~~~~~l~l~~~l~g~~~~~~~ 326 (418)
T TIGR00889 251 KNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDP----EYFGYALLFLSMIVYGCAFDFFN 326 (418)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCc----chhhHHHHHHHHHHHHHHHHHHH
Confidence 11223556666677888889999999999999999988888777655544210 00111222222222322222234
Q ss_pred ccccccccccCchhhhhhhhHHHH-HHhhhhHHHHHHHHHHhhhc------cCchHHHHHHHHHHHHHHHHHH-hccccC
Q 010212 421 TTTFVVPAEIFPARLRSTCHGISA-ASGKAGAIVGAFGFLYLADT------SGVKKALLILGGANFLGMLFTF-LVPESK 492 (515)
Q Consensus 421 ~~~~~~~~~~~p~~~~~~~~g~~~-~~~~~g~~i~~~~~~~l~~~------~g~~~~~~~~~~~~~~~~~~~~-~~~~~~ 492 (515)
+....++.|.+|++.|++++|+.+ ....+|.+++|.+.|.+.|. .||+.+|.+.+++.+++.+..+ +++|++
T Consensus 327 ~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~ 406 (418)
T TIGR00889 327 ISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSH 406 (418)
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 555677899999999999999997 56789999999999999987 4588899888888777776666 666654
Q ss_pred CC
Q 010212 493 GK 494 (515)
Q Consensus 493 ~~ 494 (515)
+.
T Consensus 407 ~~ 408 (418)
T TIGR00889 407 NA 408 (418)
T ss_pred cC
Confidence 43
No 76
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.96 E-value=3.2e-27 Score=230.60 Aligned_cols=377 Identities=16% Similarity=0.078 Sum_probs=217.3
Q ss_pred hHHHHHHhhhHHHHHHh-hhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHH
Q 010212 31 GFFTDAYDLFCISLVTK-LLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMV 109 (515)
Q Consensus 31 ~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~ 109 (515)
.++......+...+..| .+.+++ |++..+.|++.+.+.++..++++++|+++||+|||++++++..+.+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~l~~~~----------g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~ 87 (420)
T PRK09528 18 FFFFFFFIWSSWFSFFPIWLHDIN----------GLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLL 87 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHH
Confidence 33334444444445544 455568 9999999999999999999999999999999999999888766655
Q ss_pred HHHHHhh---hcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 010212 110 ICSLASG---LSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIV 186 (515)
Q Consensus 110 i~~~~~~---~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l 186 (515)
++..... .++.. ....+...++++++.|.+.....+....+..+ . .+++++.++......++|..+++.+++.+
T Consensus 88 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~~i~~~~~g~l 164 (420)
T PRK09528 88 VLFGPFFIYVFAPLL-QYNILLGAIVGGIYLGFGFLAGAGAIEAYIER-V-SRRSGFEYGRARMWGSLGWALCAFIAGIL 164 (420)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhhccchhhhhhHHHH-H-HhhccccchhhHHhhhHHHHHHHHHHHHH
Confidence 4433221 11110 00001223344444554443333444343322 2 24567788888889999999999999988
Q ss_pred HHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhcC-CchhhHHHHhccHHHHHHHHHHHHHhhh
Q 010212 187 SAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKMP-ETARYTALVAKNAKQAAADMSKVLQVEL 265 (515)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~-e~p~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (515)
.+ .+|++.|++.++..++..+..++.+ |+++. ...++ ++. +
T Consensus 165 ~~------------------------~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~-~---------- 206 (420)
T PRK09528 165 FN------------------------INPQINFWLGSGSALILLVLLFFAKPDAPST--AKVAN-ALG-A---------- 206 (420)
T ss_pred Hh------------------------cCchHhHHHHHHHHHHHHHHHhcccccccch--hhhcc-chh-c----------
Confidence 42 2499999987777766555554443 33221 00000 000 0
Q ss_pred hHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccchhHHHHHHHHHH
Q 010212 266 EAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKIARA 345 (515)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (515)
+.++.+.++.++.++++.. +.+ .+........+.....+.|.++.+..... .. + ....+ .
T Consensus 207 -----~~~~~~~~~~~~~l~~~~~----~~l---~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~----~~~~g-~ 266 (420)
T PRK09528 207 -----NASAVSLKDALALLKLPKF----WFL---VLYVIGVACFYDVFDQQFPNFFASFFATP-EQ--G----TRVFG-Y 266 (420)
T ss_pred -----ccccccHHHHHHHccCCCe----Eee---hHHHHHHHHHHHHHHHHHHHHHHHHHhcc-Cc--c----hHHHH-H
Confidence 0000000001111222111 111 11111111122222223344433321000 00 0 00111 1
Q ss_pred HHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccc
Q 010212 346 QTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFV 425 (515)
Q Consensus 346 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (515)
......+..+++.++.|++.||+|+|+.+..+..+..+..+++.+.. +.+. ++...+..+.......+....
T Consensus 267 ~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~-------~~~~-~~~~~~l~g~~~~~~~~~~~~ 338 (420)
T PRK09528 267 LNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFAT-------GPLE-VSILKLLHAFEVPFLLVGVFK 338 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcc-------cHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 34444556678888999999999999998888877777666655432 2222 222222222222222233446
Q ss_pred cccccCchhhhhhhhHH-HHHHhhhhHHHHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHH
Q 010212 426 VPAEIFPARLRSTCHGI-SAASGKAGAIVGAFGFLYLADTSGVKKALLILGGANFLGMLFTF 486 (515)
Q Consensus 426 ~~~~~~p~~~~~~~~g~-~~~~~~~g~~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 486 (515)
+..|.+|++.+++..+. .++...+|.+++|.+.|.+.|..||+..|...+++.++..++.+
T Consensus 339 ~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~ 400 (420)
T PRK09528 339 YITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISV 400 (420)
T ss_pred HHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHH
Confidence 77888899999888766 67778899999999999999999999999988888777666555
No 77
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.96 E-value=5.5e-27 Score=223.89 Aligned_cols=332 Identities=14% Similarity=0.109 Sum_probs=232.9
Q ss_pred hHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhcC
Q 010212 40 FCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLSF 119 (515)
Q Consensus 40 ~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~ 119 (515)
..+++.+|.+.+++ |.+.++.+++.+.+.++..+++++.|+++||+|||+++..+.++..++.+.+ .++
T Consensus 17 ~~~~~~lp~l~~~~----------~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~ 85 (355)
T TIGR00896 17 TSVGPLLPQIRSAL----------GMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAP 85 (355)
T ss_pred ccCcccHHHHHHHh----------CCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-Hhc
Confidence 55678999999999 9999999999999999999999999999999999999999999988888877 666
Q ss_pred CCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcc
Q 010212 120 GKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFPAPIY 199 (515)
Q Consensus 120 ~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~~~~~ 199 (515)
+ ++.+++.|++.|++.+...+....++.|++| ++|++++++.+.+.++|..+++.+++.+.+..+
T Consensus 86 ~------~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~-------- 150 (355)
T TIGR00896 86 G------TALLFAGTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSG-------- 150 (355)
T ss_pred c------HHHHHHHHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--------
Confidence 6 7889999999999999888888889999986 579999999999999999999999888753321
Q ss_pred CCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhcCCchhhHHHHhccHHHHHHHHHHHHHhhhhHhhhhHHHhhcCC
Q 010212 200 SANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVELEAEQEKVEQEKGKN 279 (515)
Q Consensus 200 ~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (515)
.+||+.|.+.++..++... .++||.++. ++ ++ ++.++..
T Consensus 151 -------------~~w~~~f~~~~~~~~~~~~--~~~~~~~~~-----~~-~~--------------------~~~~~~~ 189 (355)
T TIGR00896 151 -------------GHWQQALAWWALPALLALL--AWIPQVRRR-----VA-AN--------------------QTTTRLT 189 (355)
T ss_pred -------------hhHHHHHHHHHHHHHHHHH--HHhhhhccc-----cC-CC--------------------CCCCCCC
Confidence 2399998876554433322 234443211 00 00 0000011
Q ss_pred cchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHH
Q 010212 280 DFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYW 359 (515)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (515)
.++.++++. .+......++....++....+.|.++++.++++... ........++.+++++
T Consensus 190 ~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~lp~~~~~~g~~~~~~------------g~~~~~~~~~~i~~~~ 250 (355)
T TIGR00896 190 PVRIWRSPL-------AWQVTVFFGLQSGLYYSLIGWLPAILISHGASAATA------------GSLLALMQLAQAASAL 250 (355)
T ss_pred CchhhcCHh-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH------------HHHHHHHHHHHHHHHH
Confidence 222333221 222233333444556666778888888766654432 2256667788889999
Q ss_pred HHHHHHHhh-chhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCcccccccccccc-Cchhhhh
Q 010212 360 FTVALIDKI-GRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEI-FPARLRS 437 (515)
Q Consensus 360 ~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~ 437 (515)
+.|++.||+ +||+.+..+..+..++.+.+.... ...... ..+..++......+...+...+. .+++.++
T Consensus 251 ~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~--~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g 321 (355)
T TIGR00896 251 LIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAP-------MHGLWA--WALVLGLGQGGAFPLALTLIGLRSRQAAQAA 321 (355)
T ss_pred hHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhh-------hhHHHH--HHHHHHHhhhhHhHHHHHHHHHhccCHHHHH
Confidence 999999999 456666666666666655554332 111111 12223333333344544444443 4467789
Q ss_pred hhhHHHHHHhhhhHHHHHHHHHHhhhccC
Q 010212 438 TCHGISAASGKAGAIVGAFGFLYLADTSG 466 (515)
Q Consensus 438 ~~~g~~~~~~~~g~~i~~~~~~~l~~~~g 466 (515)
...++.+...+++..++|.+.|.+.|..|
T Consensus 322 ~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 322 ALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999998766
No 78
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.96 E-value=4e-26 Score=221.44 Aligned_cols=379 Identities=14% Similarity=0.059 Sum_probs=245.0
Q ss_pred HHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhh-----hhhh-HHH
Q 010212 29 GMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKM-----GRKR-VYG 102 (515)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~-----Grr~-~l~ 102 (515)
...++.++.........+|...++. |.|.+++|++..+... .+..+++|+++||+ |||| .+.
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~l~~~----------g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~ 72 (402)
T PRK11902 5 LLLGFASGLPLALTSGTLQAWMTVE----------GLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLL 72 (402)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHc----------CCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHH
Confidence 3456777888888888999999998 9999999999777776 69999999999999 8876 688
Q ss_pred HHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHH
Q 010212 103 MTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMV 182 (515)
Q Consensus 103 ~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l 182 (515)
++.++.+++..+.++.+... .++.+++..++.++..+...+...+++.|++|+++|+++.++...+..+|.++++.+
T Consensus 73 ~~~~~~~l~~~~l~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l 149 (402)
T PRK11902 73 LTQVGLAASIAAMAFCPPHA---ALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGL 149 (402)
T ss_pred HHHHHHHHHHHHHHhcCccc---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHH
Confidence 88888888888877774311 167788888888888888889999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhcCCchhhHHHHhccHHHHHHHHHHHHH
Q 010212 183 AIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKMPETARYTALVAKNAKQAAADMSKVLQ 262 (515)
Q Consensus 183 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~ 262 (515)
+..+.+. ..|||..|++.++..++..+..++.||+++. .+++ ++..+.
T Consensus 150 ~~~l~~~----------------------~~gw~~~f~i~a~~~l~~~l~~~~~~e~~~~--~~~~--~~~~~~------ 197 (402)
T PRK11902 150 ALWLADR----------------------VLGWGNTYLLMAGLMLAGALTTLWAPEPEVP--ARPP--RSLGEA------ 197 (402)
T ss_pred HHHHHhc----------------------ccCHHHHHHHHHHHHHHHHHHHHhcCCCccc--cccc--chhHHH------
Confidence 8887521 2469999999777666655555667776542 1100 000000
Q ss_pred hhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccchhHHHHHHH
Q 010212 263 VELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKI 342 (515)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (515)
..+..++.++++.. +..+...+.........+ ....+.+.++.|+++.. .
T Consensus 198 -------------~~~~~~~l~~~~~~----~~~l~~~~l~~~~~~~~~--~~~~~~l~~~~G~~~~~-----------~ 247 (402)
T PRK11902 198 -------------VVGPLRDFFSRRGA----WALLLLIVLYKLGDAFAG--SLSTTFLIRGAGFSAGE-----------V 247 (402)
T ss_pred -------------HHHHHHHHHhCcCH----HHHHHHHHHHHhHHHHHH--HHHHHHHHHhcCCCHHH-----------H
Confidence 00011112222221 112221111111111111 12223344445655433 2
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHH---HHHHHhhcCc
Q 010212 343 ARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYS---LTFFFSNFGP 419 (515)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 419 (515)
+........++.+++.++++++.||+++|+.+..+..+..+..+.+...... +++.+....... +..+......
T Consensus 248 g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~~~ 324 (402)
T PRK11902 248 GIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVT---PKHLWTMALAIGIENLCGGMGTAAF 324 (402)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc---CCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 2223333445678888999999999999988776666655544333221110 011222222111 1222223333
Q ss_pred cccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHHhcccc
Q 010212 420 NTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSGVKKALLILGGANFLGMLFTFLVPES 491 (515)
Q Consensus 420 ~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (515)
.+....++.+.+|.+.+ ++.+....++..+++.+.|.+.|..||+..|.+.+++++++.++....+++
T Consensus 325 ~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~~~~~~ 392 (402)
T PRK11902 325 VALLMALCNRSFSATQY----ALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLWLMRGT 392 (402)
T ss_pred HHHHHHhcCCCCcHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 44556677777775544 555555667777677789999999999999998888888877666544433
No 79
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.96 E-value=6.4e-28 Score=213.50 Aligned_cols=364 Identities=15% Similarity=0.099 Sum_probs=212.0
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhcccc
Q 010212 64 TLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGG 143 (515)
Q Consensus 64 ~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 143 (515)
+.+....|.+.+.|.++..+.++.+|.++||+|||+++++|++..++..++.+++.+ |..+.++|++.|+..|.
T Consensus 64 ~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~------F~afv~aR~l~Gi~kgn 137 (451)
T KOG2615|consen 64 GASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRN------FAAFVLARFLGGIFKGN 137 (451)
T ss_pred cccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHhhhhccCc
Confidence 456778899999999999999999999999999999999999999999999999999 87777779999998775
Q ss_pred ccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhH
Q 010212 144 DYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGA 223 (515)
Q Consensus 144 ~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~ 223 (515)
..+..++++|.+++|+|+++++.++...++|.++||.+|+++...... ...+..-.+-++..
T Consensus 138 -l~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~-----------------~g~~p~alP~~~v~ 199 (451)
T KOG2615|consen 138 -LSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSI-----------------SGSYPFALPCLLVF 199 (451)
T ss_pred -hHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhh-----------------hccCchHHHHHHHH
Confidence 689999999999999999999999999999999999999999862210 11111222233333
Q ss_pred HHHHH-HHHHHHhcCCchhhHHHHhccHHHHHHHHHHHHHhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHH
Q 010212 224 IPALL-TYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVT 302 (515)
Q Consensus 224 ~~~~~-~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (515)
+.+.. .....+++||+-+. +++. ++...+.+..+++ .+..+.+ ....-...+++..+..........+-
T Consensus 200 i~a~~~v~~~~~~lpETL~~---rk~~--~~~~~~~~~~~~~--~~~~~~~---~~~~v~~lrn~p~~~~i~~~~i~~l~ 269 (451)
T KOG2615|consen 200 ILAAGDVTFFPWFLPETLPL---RKRN--DEHSTLQEAADDR--LALLKFA---RIFKVAALRNPPLLDFISVLRIFGLH 269 (451)
T ss_pred HHHHHHHHHHHHhCCccccc---hhhc--ccccchhhhhhhh--hhhcchh---hhhhhhhhcCccccchHHHHHHHHHH
Confidence 33333 44566789998433 1111 1111111111000 0000000 00000011111111100111111122
Q ss_pred HHHHHHHHHHHhhhhhHHH-hHhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhc--hhhHHHHHHH
Q 010212 303 WFLLDVAYYSQNLFQKDIF-TAIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIG--RFAIQLMGFF 379 (515)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g--~~~~~~~~~~ 379 (515)
.+.....+.....+.+.+. +..|+++.+.+. .....++...+.........||.+ .+-.+..+..
T Consensus 270 ~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~------------vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~ 337 (451)
T KOG2615|consen 270 YFLYLELFSGLENTVLFLTHGRFGYSSMQQGK------------VLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLL 337 (451)
T ss_pred HHHHHHHHHHHHhhHHHhhcCccCCChhhhee------------eeehhhHHHHHHHHhccccccccccchhhHHHHHHH
Confidence 2222222222222222221 346677666443 222222222222222233333333 2223333333
Q ss_pred HHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHH
Q 010212 380 FMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFL 459 (515)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~ 459 (515)
++.-..+++.... ....+.....+..+......+....++....|.++||+.+|+....+.++.++||.+.|
T Consensus 338 ~~vP~~llls~~~--------~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g 409 (451)
T KOG2615|consen 338 LIVPAFLLLSLAR--------TPVVLYLGSTLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSG 409 (451)
T ss_pred HHHHHHHHHhccc--------cchhhhHHHHHHHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhh
Confidence 3333333322221 12233333333334444344556677888999999999999999999999999999999
Q ss_pred Hhhhc-cCchHHHHHHHHHHHHH
Q 010212 460 YLADT-SGVKKALLILGGANFLG 481 (515)
Q Consensus 460 ~l~~~-~g~~~~~~~~~~~~~~~ 481 (515)
.+... .+-+.++...+.+.++.
T Consensus 410 ~i~~Ws~~~~~a~~~~~~L~~~~ 432 (451)
T KOG2615|consen 410 VIFSWSQGAQPAYIAWGALLLIP 432 (451)
T ss_pred eeEEEecCCCceeeehHHHHHHH
Confidence 88752 23334444444444444
No 80
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.96 E-value=5e-26 Score=222.49 Aligned_cols=376 Identities=14% Similarity=0.073 Sum_probs=259.8
Q ss_pred HHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHH
Q 010212 28 AGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMM 107 (515)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~ 107 (515)
++++.+...+...+.....+.+..+. .-|+...+++..+..+...+.++++|.++||++|||+++.+.++
T Consensus 15 lw~a~~iS~lG~~~~~va~~wlv~~l----------t~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~ 84 (524)
T PF05977_consen 15 LWIAQLISNLGDWMQTVALAWLVTQL----------TGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLL 84 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH----------hCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHH
Confidence 34455555555555666777777777 78899999999999999999999999999999999999999988
Q ss_pred HHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 010212 108 MVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVS 187 (515)
Q Consensus 108 ~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~ 187 (515)
..+..+..++....+. .+.+.+++.-++.|++.+...|+.++++.|..|+++...+.++.+...++..++||.++|.+.
T Consensus 85 ~~~~~~~L~~l~~~~~-~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lv 163 (524)
T PF05977_consen 85 RALVALLLAVLAFFGL-LSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILV 163 (524)
T ss_pred HHHHHHHHHHHHHhCc-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHH
Confidence 8766555443211111 116889999999999999999999999999999999999999999999999999999999997
Q ss_pred HhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhcCCchhhHHHHhccHHHHHHHHHHHHHhhhhH
Q 010212 188 AAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVELEA 267 (515)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (515)
...+ -.+.|++.++..++.+......+..++. ++..++.-.+
T Consensus 164 a~~G-----------------------~~~~f~inalsfl~~i~~l~~~~~~~~~---~~~~~e~~~~------------ 205 (524)
T PF05977_consen 164 AFFG-----------------------AAAAFLINALSFLISILALLRWKPPPPP---SSLPRERFFS------------ 205 (524)
T ss_pred HHHH-----------------------HHHHHHHHHHHHHHHHHHHHHccccccc---cccchhhhhh------------
Confidence 6554 6778888666555544444334332111 0000000000
Q ss_pred hhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhH-hcccCCcccchhHHHHHHHHHHH
Q 010212 268 EQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTA-IGWIPKAKTMNAIEEVYKIARAQ 346 (515)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 346 (515)
..++-++.....+..+..+.....+. .........+|.+.++ .+..+...+. .
T Consensus 206 -----------~l~~G~ryv~~~~~l~~~l~~~~~~~---l~~~a~~aLlPl~a~~~l~~~a~~yGl------------l 259 (524)
T PF05977_consen 206 -----------ALREGLRYVRSSPPLRSVLLRSFLFN---LFASAVWALLPLFARDVLGGGASGYGL------------L 259 (524)
T ss_pred -----------hHHHHHHHHhcchHHHHHHHHHHHHH---HhhhHHHHhhhHHHHHHhCCcHHHHHH------------H
Confidence 01111111111111112222222222 2222233345666544 4444333222 6
Q ss_pred HHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCcccccccc
Q 010212 347 TLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVV 426 (515)
Q Consensus 347 ~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (515)
....+++.++|.++.+++.+|+++++.+..+.++.+++++.+++.. +.+......+..+.+.........+.
T Consensus 260 ~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~--------~~~~~~~~l~l~G~~~~~~~~~~~t~ 331 (524)
T PF05977_consen 260 LAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSP--------SFWLALIALFLAGAAWIIANSSLNTL 331 (524)
T ss_pred HHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcch--------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6777888999999999999999988888888888777777766543 22233333333444444445556678
Q ss_pred ccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHH
Q 010212 427 PAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSGVKKALLILGGANFLGMLFTF 486 (515)
Q Consensus 427 ~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 486 (515)
.++..|++.||++++++.+....+..+|..+.|.+.+..|...++.+.++..+++.++..
T Consensus 332 ~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 332 VQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999888877776666666555
No 81
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.96 E-value=9.9e-26 Score=217.11 Aligned_cols=356 Identities=9% Similarity=0.001 Sum_probs=229.8
Q ss_pred HHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhh----hHHHHHHHH
Q 010212 32 FFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRK----RVYGMTLMM 107 (515)
Q Consensus 32 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr----~~l~~~~~~ 107 (515)
++..........|.+|.+.+++ +.|.++.|++.+++.++..++++++|+++||+||| +.+.+...+
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~~~----------g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~ 82 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLKGQ----------GYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLL 82 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHhc----------CCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHH
Confidence 4444555677788889999999 99999999999999999999999999999999984 333322222
Q ss_pred HHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 010212 108 MVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVS 187 (515)
Q Consensus 108 ~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~ 187 (515)
. ........++ ++.+++.|++.|++.+...+...+++.++ +++|+++.+......++|.++||++++.+.
T Consensus 83 ~--~~~~~~~~~~------~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~ 152 (382)
T PRK11128 83 F--AVAFWFGAHS------FWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLV 152 (382)
T ss_pred H--HHHHHHhccc------HHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 2 2222333455 89999999999999888889888888876 355788888888899999999999999996
Q ss_pred HhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhcCCchhhHHHHhccHHHHHHHHHHHHHhhhhH
Q 010212 188 AAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVELEA 267 (515)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (515)
+ ..|||..|++.++..++..+..++.||+++. +++++.
T Consensus 153 ~-----------------------~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-------------- 190 (382)
T PRK11128 153 S-----------------------WFGEQAILWILTAGVASMLLGQLLRPTIMPQ-----GESRQQ-------------- 190 (382)
T ss_pred H-----------------------HcChhHHHHHHHHHHHHHHHHHHccCCCCCc-----cccccc--------------
Confidence 4 3459999988666554444444445553221 000000
Q ss_pred hhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccchhHHHHHHHHHHHH
Q 010212 268 EQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKIARAQT 347 (515)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (515)
.++...+.++.++++ .++......+...........+.+.+.++.|+++... +. ..
T Consensus 191 -----~~~~~~~~~~i~~~~-------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~s~~~~-----------g~-~~ 246 (382)
T PRK11128 191 -----ESAGWPAWKALLKEP-------TVWRFLLCVSLLQGSHAAYYGFSAIYWQAAGYSASTI-----------GY-LW 246 (382)
T ss_pred -----cccccchHHHHHcCh-------hHHHHHHHHHHHHHHhHhHHHHHHHHHHHCCCCHhHH-----------HH-HH
Confidence 000011122222222 1222222222222333344445566666666554332 22 33
Q ss_pred HHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccc
Q 010212 348 LIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVP 427 (515)
Q Consensus 348 ~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (515)
....+..++..++.+++.||+++|+.+..+....+++.+++.... +.+ .+....++.+.......+....+.
T Consensus 247 ~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~-------~~~-~~~~~~~l~g~~~~~~~~~~~~~~ 318 (382)
T PRK11128 247 SLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTT-------ALP-WLIVIQILHCGTFTVCHLAAMRYI 318 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhh-------hHH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455667788888999999999999998888887777665554322 222 222223322322222244455666
Q ss_pred cccCchhhhhhhhHHHH-HHhhhhHHHHHHHHHHhhhccCchHHHHHHHHHHHHHHH
Q 010212 428 AEIFPARLRSTCHGISA-ASGKAGAIVGAFGFLYLADTSGVKKALLILGGANFLGML 483 (515)
Q Consensus 428 ~~~~p~~~~~~~~g~~~-~~~~~g~~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~ 483 (515)
.+. +++++++..++.+ .....|..++|.+.|.+.|..|+ ..++..+++.+++.+
T Consensus 319 ~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~~ 373 (382)
T PRK11128 319 AAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPALF 373 (382)
T ss_pred HHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHH
Confidence 665 5566788888887 44566779999999999998887 456656655555443
No 82
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.96 E-value=2.2e-25 Score=218.94 Aligned_cols=411 Identities=10% Similarity=0.031 Sum_probs=248.1
Q ss_pred HHHHHHHhHHHHHHhhhHHH-HHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhhHH
Q 010212 24 AIVIAGMGFFTDAYDLFCIS-LVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDK-MGRKRVY 101 (515)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr-~Grr~~l 101 (515)
.+..+++..+...+..+... .+...+.+++ |.+.++.+++.+.+.....+..+++|+++|| +||||++
T Consensus 15 ~~~~~~~~~~~er~~~y~~~~~l~~yl~~~l----------g~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~ 84 (489)
T PRK10207 15 PFFMIFFVELWERFGYYGVQGILAVFFVKQL----------GFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTI 84 (489)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHH
Confidence 34444444444444444443 4556667788 9999999999999999999999999999999 9999999
Q ss_pred HHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccc--cchhHHHHHHHHHHHHHHHH
Q 010212 102 GMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKK--TRGAFIAAVFAMQGFGILSG 179 (515)
Q Consensus 102 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~--~r~~~~~~~~~~~~~G~~~g 179 (515)
+.+.+++++++++++++.+. ...++++|.++|+|.|...+...+++.|.+|++ +|++++++++.+.++|.++|
T Consensus 85 ~~g~~~~~~g~~~~~~~~~~-----~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g 159 (489)
T PRK10207 85 VLGAIVLAIGYFMTGMSLLK-----PDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLIS 159 (489)
T ss_pred HHHHHHHHHHHHHHHHhccc-----hhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHH
Confidence 99999999999999998762 234568999999999999999999999999877 45778999999999999999
Q ss_pred HHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhcCCchhhHHHHh-ccHHHHHHHHH
Q 010212 180 GMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKMPETARYTALVA-KNAKQAAADMS 258 (515)
Q Consensus 180 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~-~~~~~~~~~~~ 258 (515)
|.+++++.+ ..|||+.|++.++..++.++.+.+.++..+....+. +++.+......
T Consensus 160 ~~l~g~l~~-----------------------~~gw~~~F~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l 216 (489)
T PRK10207 160 LSLAPVIAD-----------------------KFGYSVTYNLCGAGLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLL 216 (489)
T ss_pred HHHHHHHHH-----------------------hhChHHHHHHHHHHHHHHHHHHHHcchhhcccCCCCCccchhhhhHHH
Confidence 999999964 346999999865544444433333332211100000 00011000000
Q ss_pred H-------HHH----hhhhHhhhh-------------HHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHh
Q 010212 259 K-------VLQ----VELEAEQEK-------------VEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQN 314 (515)
Q Consensus 259 ~-------~~~----~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (515)
- ... .+....... ..++.+. .+.+|++.. ....+.+........+....
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~~~~--~~~~r~r~~-----~~~~l~~~~~~f~~~~~q~~ 289 (489)
T PRK10207 217 VLLGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTIIFFREAFKL--DKTGRNKMF-----VAFVLMLEAVVFYILYAQMP 289 (489)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcC--CHHHHHHHH-----HHHHHHHHHHHHHHHHHHcc
Confidence 0 000 000000000 0001111 122222211 11111111222222333333
Q ss_pred hhhhHHHhH-hcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhh-------HHHHHHHHHHHHHH
Q 010212 315 LFQKDIFTA-IGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFA-------IQLMGFFFMTVFMF 386 (515)
Q Consensus 315 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~-------~~~~~~~~~~~~~~ 386 (515)
...+.+.++ .+. ...+.... .........+..++..++.+++.||+++|+ .+.++.++.+++++
T Consensus 290 ~~l~l~~~~~~~~--~~~G~~i~------~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~ 361 (489)
T PRK10207 290 TSLNFFAINNVHH--EILGFSIN------PVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFL 361 (489)
T ss_pred cHHHHHHHHhccc--cccceEEC------HHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHH
Confidence 444444442 211 11111100 001222333445556667789999999886 36677777777765
Q ss_pred HHHhhhh--cccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhh-
Q 010212 387 ALAIPYH--HWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLAD- 463 (515)
Q Consensus 387 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~- 463 (515)
.+..... .......+.++.+...++.+.+.....+...+++.+..|++.++.++|+.+...++|+.++..+......
T Consensus 362 ~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~ 441 (489)
T PRK10207 362 TAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVP 441 (489)
T ss_pred HHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 4432111 1111122334444555555666666778888888999999999999999999999999999888765521
Q ss_pred ---------ccCchHHHHHHHHHHHHHHHHHHh
Q 010212 464 ---------TSGVKKALLILGGANFLGMLFTFL 487 (515)
Q Consensus 464 ---------~~g~~~~~~~~~~~~~~~~~~~~~ 487 (515)
...+...|...++..+++.++.+.
T Consensus 442 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~ 474 (489)
T PRK10207 442 DNITDPLETLPVYTNVFGKIGLVTLGVAVVMAL 474 (489)
T ss_pred cccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 112456666666666666655553
No 83
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.95 E-value=1.6e-24 Score=213.00 Aligned_cols=410 Identities=11% Similarity=0.045 Sum_probs=251.0
Q ss_pred HHHHHhHHHHHHhhhHHHHHHhhh-hhh--hhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhhHH
Q 010212 26 VIAGMGFFTDAYDLFCISLVTKLL-GRI--YYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDK-MGRKRVY 101 (515)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~i-~~~--~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr-~Grr~~l 101 (515)
..+.+..+.+.+..+...+.+|.. .++ + |.+..+.+++.+.+.++..++++++|+++|| +|||+++
T Consensus 13 ~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~l----------g~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l 82 (475)
T TIGR00924 13 FTLFFVELWERFSYYGMQGILAVYLVQQAGL----------GFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTM 82 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC----------CCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHH
Confidence 333444555555555555555554 444 6 8999999999999999999999999999999 8999999
Q ss_pred HHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhcccccc---chhHHHHHHHHHHHHHHH
Q 010212 102 GMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKT---RGAFIAAVFAMQGFGILS 178 (515)
Q Consensus 102 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~---r~~~~~~~~~~~~~G~~~ 178 (515)
.++.++.+++.++.+++++ ++.++++|++.|++.|...+...++++|++|+++ |+++.++++.+.++|.++
T Consensus 83 ~~~~~~~~~g~~~~~~~~~------~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~i 156 (475)
T TIGR00924 83 VLGGIVLMLGHFMLAMSIY------PDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFI 156 (475)
T ss_pred HHHHHHHHHHHHHHHhccc------HhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHH
Confidence 9999999999999999887 6888999999999999999999999999998764 888999999999999999
Q ss_pred HHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhcC----CchhhHHHHhccHHHHH
Q 010212 179 GGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKMP----ETARYTALVAKNAKQAA 254 (515)
Q Consensus 179 g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~----e~p~~~~~~~~~~~~~~ 254 (515)
||.+++.+. +..|||+.|.+.++..++..+.+.+.+ +.|+.....++++++..
T Consensus 157 g~~l~g~l~-----------------------~~~g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (475)
T TIGR00924 157 SPLLAGVIA-----------------------ENYGYHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYG 213 (475)
T ss_pred HHHHHHHHH-----------------------HhcChHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhH
Confidence 999999985 335699999997765555444443333 22211000000000000
Q ss_pred HHHHH------------HHHhhhhHhhh-----------h-HHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHH
Q 010212 255 ADMSK------------VLQVELEAEQE-----------K-VEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAY 310 (515)
Q Consensus 255 ~~~~~------------~~~~~~~~~~~-----------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (515)
+.... ....+...... . .+...+++..+ ...++. ..++.+..........+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~l~l~~~~~~~~~~~ 288 (475)
T TIGR00924 214 KLLLALLAALALVFFCAWLMHHVVIANILLMTVTLAVIIFFFRLAFKPRLDA----VARNKM-YAYIVLFLEAVVFWVLY 288 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhccCCH----HHHhHH-HHHHHHHHHHHHHHHHH
Confidence 00000 00000000000 0 00000000000 001111 11222222222222233
Q ss_pred HHHhhhhhHHHhH-hcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhch-----hhHH--HHHHHHHH
Q 010212 311 YSQNLFQKDIFTA-IGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGR-----FAIQ--LMGFFFMT 382 (515)
Q Consensus 311 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~-----~~~~--~~~~~~~~ 382 (515)
.......+.+.++ .+......+.. .+. ......+..++..++..++..|.+| +... .++.++.+
T Consensus 289 ~Q~~s~l~l~~~~~~~~~~~~~~ip-------~~~-~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~ 360 (475)
T TIGR00924 289 AQMPTSLNFFADNNMHHEMLGMSVP-------VIW-FQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCG 360 (475)
T ss_pred HHhhhHHHHHHHHhccccccceEEC-------HHH-HHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHH
Confidence 3333333333322 11111111110 111 2233333333333333333333332 2333 66777777
Q ss_pred HHHHHHHhhhhcccC-CCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHh
Q 010212 383 VFMFALAIPYHHWTL-PDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYL 461 (515)
Q Consensus 383 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l 461 (515)
+++..+.+....... ...+.++.+...++.+.+.....|...++..+..|++.||+++|+......+|..+++.+....
T Consensus 361 ~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~ 440 (475)
T TIGR00924 361 ASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFG 440 (475)
T ss_pred HHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777666543211111 1234555566666666777777899999999999999999999999999999999999998888
Q ss_pred hhccCchHHHHHHHHHHHHHHHHHHh
Q 010212 462 ADTSGVKKALLILGGANFLGMLFTFL 487 (515)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~~~~~~ 487 (515)
.+..++...+...++++++..+..++
T Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (475)
T TIGR00924 441 AVPQGVTGVFGKIGLVTLLVGVVMAL 466 (475)
T ss_pred hcccchhhHHHHHHHHHHHHHHHHHH
Confidence 77777877787777777766666553
No 84
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.95 E-value=1.6e-25 Score=246.35 Aligned_cols=368 Identities=14% Similarity=0.001 Sum_probs=232.0
Q ss_pred hHHHHHHhhhhhhhhccCCCCCCCCC--chhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhh
Q 010212 40 FCISLVTKLLGRIYYYKEGSDSPGTL--PDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGL 117 (515)
Q Consensus 40 ~~~~~~~~~i~~~~~~~~~~~~~~~~--s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~ 117 (515)
.....+.+.+..++ +. +....+++.+++.+++.++++++|+++||+|||++++.+.++..++.++..+
T Consensus 27 ~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~ 96 (1146)
T PRK08633 27 GHKILIQNTLIKAY----------DGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVL 96 (1146)
T ss_pred HHHHHHHHHHHHHc----------CcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHH
Confidence 33345555555555 33 3455799999999999999999999999999999999988776666555443
Q ss_pred ---cCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 010212 118 ---SFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANF 194 (515)
Q Consensus 118 ---~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~ 194 (515)
+.+ ++.++++|+++|++.+...++..+++.|++|+++|++++++...+..+|.++|+++++++........
T Consensus 97 ~~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~ 170 (1146)
T PRK08633 97 AYYLGW------FWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNT 170 (1146)
T ss_pred HHHHcc------HHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 455 89999999999999999999999999999999999999999999999999999999999875421000
Q ss_pred CCCccCCCCCCccccCCCchHHHHHHH-hHHHHHHHHHHHHhcCCchhhHHHHhccHHHHHHHHHHHHHhhhhHhhhhHH
Q 010212 195 PAPIYSANPAASTVPEADYIWRIILMF-GAIPALLTYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVELEAEQEKVE 273 (515)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~wr~~f~~-~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (515)
.....+|++.+.+ .....++.++..+.+||+|+.. ..+.+++......
T Consensus 171 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~--------------- 219 (1146)
T PRK08633 171 --------------PSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVPAAA--PEVFDKKKYLFPK--------------- 219 (1146)
T ss_pred --------------ccccccchHHHHHHHHHHHHHHHHHHhcCcCCCCCC--cccccccccccHH---------------
Confidence 0011224444444 3333344455556678876541 1110000000000
Q ss_pred HhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhH-hcccCC-cccchhHHHHHHHHHHHHHHHH
Q 010212 274 QEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTA-IGWIPK-AKTMNAIEEVYKIARAQTLIAL 351 (515)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 351 (515)
+.....+..++++ .++...+..++.....+....+.|.++.+ .++++. . .........
T Consensus 220 -~~~~~~~~l~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~------------~g~~~~~~~ 279 (1146)
T PRK08633 220 -LLWRNLKLLRSDR-------VLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQ------------VQYLLAASA 279 (1146)
T ss_pred -HHHHHHHHHhcCc-------HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHH------------HHHHHHHHH
Confidence 0000011111111 11112222222222333334445555543 455443 2 222556667
Q ss_pred hhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccC
Q 010212 352 CSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIF 431 (515)
Q Consensus 352 ~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (515)
++.+++.++.+++.||+++++.+.++.++.+++.+++.... ......+..++.+++.....+...+++.+..
T Consensus 280 ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 351 (1146)
T PRK08633 280 IGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAP--------SLASVLVLFFLFGFSAGLFIVPLNALIQFRA 351 (1146)
T ss_pred HHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhh--------hHHHHHHHHHHHHHHHHHhhHHHHHHHhhcC
Confidence 78888999999999999998888777777766665554432 2222222333333333333455667888999
Q ss_pred chhhhhhhhHHHHHHhhhhHHHHHHHHHHhhh-ccCchHHHHHHHHHHHHHH
Q 010212 432 PARLRSTCHGISAASGKAGAIVGAFGFLYLAD-TSGVKKALLILGGANFLGM 482 (515)
Q Consensus 432 p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~-~~g~~~~~~~~~~~~~~~~ 482 (515)
|++.||+++|+.+++.+++..+++.+.+.+.. ..++...+++.+.+.++..
T Consensus 352 p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 403 (1146)
T PRK08633 352 PEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTLIGT 403 (1146)
T ss_pred CccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999888877766543 2234444555444444333
No 85
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.95 E-value=1.8e-25 Score=220.04 Aligned_cols=350 Identities=13% Similarity=0.088 Sum_probs=227.3
Q ss_pred HHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhh----hhhhh-HHHHHHHHHHHHHHHhhhc
Q 010212 44 LVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDK----MGRKR-VYGMTLMMMVICSLASGLS 118 (515)
Q Consensus 44 ~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr----~Grr~-~l~~~~~~~~i~~~~~~~~ 118 (515)
...+.+.+++ |+++.+.|++.++..+..++..++.|+++|| +|||| .++.+....+++.+++.+.
T Consensus 21 ~l~~~~~~~~----------g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~ 90 (437)
T TIGR00792 21 YLLFFYTDVL----------GLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTT 90 (437)
T ss_pred HHHHHHHHcc----------CCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhC
Confidence 3556667778 9999999999999999999999999999997 68755 5778888888888888777
Q ss_pred CCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhcc-ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCC
Q 010212 119 FGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYA-NKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFPAP 197 (515)
Q Consensus 119 ~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~-~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~~~ 197 (515)
++......+..+++.+++.+++.+...+...++..|.. ++++|++..++.+.+..+|..+++.+.+.+....+.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~----- 165 (437)
T TIGR00792 91 PDFSATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGG----- 165 (437)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----
Confidence 65322222567788889999988888888888999987 578899999999999999998888887776544331
Q ss_pred ccCCCCCCccccCCCchHHHHHHHhHHHHHHHHH-HHHhcCCchhhHHHHhccHHHHHHHHHHHHHhhhhHhhhhHHHhh
Q 010212 198 IYSANPAASTVPEADYIWRIILMFGAIPALLTYY-WRMKMPETARYTALVAKNAKQAAADMSKVLQVELEAEQEKVEQEK 276 (515)
Q Consensus 198 ~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~-~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (515)
..+..+||+.+++.++++++..+ ..+..||+++.. . .+ + ++
T Consensus 166 -----------~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~--~-~~-~-----------------------~~ 207 (437)
T TIGR00792 166 -----------GDDKFGWFMFALVLALIGVVSLIICFFGTKERYSEI--P-KN-I-----------------------EK 207 (437)
T ss_pred -----------CcccccHHHHHHHHHHHHHHHHHHHHcCCEecCCCC--C-cc-c-----------------------cc
Confidence 02356899999987777666544 345567654210 0 00 0 00
Q ss_pred cCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccchhHHHHHHHHHHHHHHHHhhhhh
Q 010212 277 GKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVP 356 (515)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (515)
+.+.++.++....++. ++......+......+....+.+.+.+. .... . ...+ .......++.++
T Consensus 208 ~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~------~----~~~~-~~~~~~~i~~ii 272 (437)
T TIGR00792 208 KLSLKQIFKALFKNDQ---LLILCLAYLFYNLAFNIKNGVQVYYFTY-VLGD------P----ELFS-YMGSIAIVAGLI 272 (437)
T ss_pred CCCHHHHHHHHhCCHH---HHHHHHHHHHHHHHHHHHcchhheeEee-ecCC------h----HHHH-HHHHHHHHHHHH
Confidence 0111222222221221 2222222222222333332233333221 1110 0 0112 234445677888
Q ss_pred HHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCc----
Q 010212 357 GYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFP---- 432 (515)
Q Consensus 357 ~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---- 432 (515)
+.++.+++.||+|+|+.+..+..+..++.+.+.+.. .......+..+..++......+..+++..|..+
T Consensus 273 ~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 345 (437)
T TIGR00792 273 GVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAG-------SNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEW 345 (437)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcc-------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhh
Confidence 899999999999999998888777776665554321 112222222222333333334566677777754
Q ss_pred ---hhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCch
Q 010212 433 ---ARLRSTCHGISAASGKAGAIVGAFGFLYLADTSGVK 468 (515)
Q Consensus 433 ---~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~ 468 (515)
++.+|.+.|+.+....++..+++.+.|.+.+..||.
T Consensus 346 ~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~~ 384 (437)
T TIGR00792 346 KTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGYV 384 (437)
T ss_pred hcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 456899999999999999999999999999877763
No 86
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.95 E-value=5.7e-26 Score=211.61 Aligned_cols=175 Identities=11% Similarity=0.081 Sum_probs=150.9
Q ss_pred HHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhH-HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHH
Q 010212 25 IVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNV-ASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGM 103 (515)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~-~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~ 103 (515)
+.+|.++++. -.+...+.+.|.+.+++ |+|.++ .|.+.++++.++++++++.|+++||+|.|+++.+
T Consensus 30 ~~lC~fGF~~--e~R~n~s~a~p~L~~el----------glT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l 97 (511)
T TIGR00806 30 LYLCFYGFMA--QFRPGESFITPYLLTVL----------NFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVL 97 (511)
T ss_pred HHHHHHHHHH--HhhchHHHHHHHHHHHc----------CCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHH
Confidence 3344444333 34778889999999999 999999 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHH
Q 010212 104 TLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVA 183 (515)
Q Consensus 104 ~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~ 183 (515)
+.+.+++.+++.+++.+ +..+.+.|++.|+++|... +...++..|+|+++|+++.++...+..+|.+++++++
T Consensus 98 ~~l~Wsl~t~L~~fa~S------l~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ 170 (511)
T TIGR00806 98 QALSFVCVWLLLLLGTS------VWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLG 170 (511)
T ss_pred HHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988 8999999999999999998 9999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHH---hHHHHHHHHHHHHhcCCchhh
Q 010212 184 IIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMF---GAIPALLTYYWRMKMPETARY 242 (515)
Q Consensus 184 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~---~~~~~~~~~~~~~~~~e~p~~ 242 (515)
+++. ..|||+.+.+ ......+++++.+++|..++.
T Consensus 171 qll~------------------------s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP~~~~s 208 (511)
T TIGR00806 171 QLLV------------------------TLGWISYSTLNIISLVFMTFSVFLALFLKRPKRS 208 (511)
T ss_pred HHHH------------------------hcCchhHHHHHHHHHHHHHHHHHHHHhCCCCchh
Confidence 9852 2458876655 333344566777889966554
No 87
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.95 E-value=1.3e-25 Score=245.95 Aligned_cols=346 Identities=12% Similarity=0.026 Sum_probs=226.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHH---HHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccc
Q 010212 68 NVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGM---TLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGD 144 (515)
Q Consensus 68 ~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~---~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~ 144 (515)
...++..+++.++++++++++|+++||+|||+++.. ..++..+..+.....++ ++.++++|+++|++.+..
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s------~~~l~~~~~l~gi~~a~~ 125 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNS------VPLLFAALFLMGIHSALF 125 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhh------HHHHHHHHHHHHHHHHhh
Confidence 457888999999999999999999999999997533 22233333333333466 899999999999999999
Q ss_pred cchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHH
Q 010212 145 YPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAI 224 (515)
Q Consensus 145 ~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~ 224 (515)
.|+..+++.|++|+++|++++++.+++.++|.++||++++++.. ..+|++.|+..++
T Consensus 126 ~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~-----------------------~~~~~~~~~~~~~ 182 (1140)
T PRK06814 126 GPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATI-----------------------SGNFVILVALLMG 182 (1140)
T ss_pred chHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHh-----------------------ccccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999964 3459999966666
Q ss_pred HHHHHHHHHHhcCCchhhHHHHhccHHHHHHHHHHHHHhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHH
Q 010212 225 PALLTYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWF 304 (515)
Q Consensus 225 ~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (515)
..++.+++.+++|++++. ..+.+.+.. .... ..+.++....+ +.++...+..+
T Consensus 183 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~--------------------~~~~~~~~~~~---~~~~~~~~~~~ 235 (1140)
T PRK06814 183 IAVLGWLASLFIPKTGNA--APDLKIDRN--IIRS--------------------TITLLKYAKAD---KRIWLAILGIS 235 (1140)
T ss_pred HHHHHHHHHhhCCCCCCC--CCCCeeccc--hHHH--------------------HHHHHHHHhcC---chHHHHHHHHH
Confidence 666666666677776432 000000000 0000 00001111111 12333333333
Q ss_pred HHHHHHHHHhhhhhHHHhH-hcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHH
Q 010212 305 LLDVAYYSQNLFQKDIFTA-IGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTV 383 (515)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~ 383 (515)
...........+.|.++++ .+.++.. .........++.++|.++.+++.|+..+++.+..+.++.++
T Consensus 236 ~~~~~~~~~~~~~p~~~~~~~g~~~~~------------~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~ 303 (1140)
T PRK06814 236 WFWLVGAVVLSQLPLLAKETLGGDENV------------ATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGL 303 (1140)
T ss_pred HHHHHHHHHHHHhHHHHHHHcCCchHH------------HHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHH
Confidence 3333444555567777765 4544433 22256677778889999999999887776665555555555
Q ss_pred HHHHHHhhhhc-------------ccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhh
Q 010212 384 FMFALAIPYHH-------------WTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAG 450 (515)
Q Consensus 384 ~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g 450 (515)
+.+.+.+.... .....+.+.. .+..++.+++.....+...+++++..|++.+|+++|+.+++..++
T Consensus 304 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~ 382 (1140)
T PRK06814 304 FGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRI-LIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAF 382 (1140)
T ss_pred HHHHHHhcccccccccccccchhhhhcccccHHH-HHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHH
Confidence 44433332000 0000122222 223333333333344557788899999999999999999999999
Q ss_pred HHHHHHHHHHhhh-ccCchHHHHHHHHHHHHHH
Q 010212 451 AIVGAFGFLYLAD-TSGVKKALLILGGANFLGM 482 (515)
Q Consensus 451 ~~i~~~~~~~l~~-~~g~~~~~~~~~~~~~~~~ 482 (515)
..+++.+.+.+.+ ..++...+++.+++.++..
T Consensus 383 ~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 415 (1140)
T PRK06814 383 MVAGTIILALLQALGFSIPWIILFIALANLIVA 415 (1140)
T ss_pred HHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHH
Confidence 9999999999874 3455555555544433333
No 88
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.95 E-value=3.2e-25 Score=214.92 Aligned_cols=379 Identities=15% Similarity=0.070 Sum_probs=228.9
Q ss_pred HHHhHHHHHHhhhHHHHHHhhh-hhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHH
Q 010212 28 AGMGFFTDAYDLFCISLVTKLL-GRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLM 106 (515)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~ 106 (515)
+...++........+.+.+|.. .+++ |.+..+.|++.+.+.++..+++++.|+++||+|||+.++.+..
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----------g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~ 76 (396)
T TIGR00882 7 FGLFFFLYFFIMSAYFPFFPIWLHDVN----------GLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIIS 76 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 3334455555555666666654 5567 9999999999999999999999999999999999999988776
Q ss_pred HHHHHHHHh---hhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHH
Q 010212 107 MMVICSLAS---GLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVA 183 (515)
Q Consensus 107 ~~~i~~~~~---~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~ 183 (515)
..+++.... .+.+.. ....+..+++.|++.|++.+...+....+..|..+ ++++..+......++|.++|+.++
T Consensus 77 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~~~ 153 (396)
T TIGR00882 77 GLLVLFAPFFIYVFGPLL-QSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR--NSNFEYGKARMFGCVGWALCASIA 153 (396)
T ss_pred HHHHHHHHHHHHHhhhHH-HHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh--hcccccchhhhhcccHHHHHHHHH
Confidence 665544332 122110 00013456778899999988888888888777543 345566777788899999999999
Q ss_pred HHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHh-cCCchhhHHHHhccHHHHHHHHHHHHH
Q 010212 184 IIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRMK-MPETARYTALVAKNAKQAAADMSKVLQ 262 (515)
Q Consensus 184 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~-~~e~p~~~~~~~~~~~~~~~~~~~~~~ 262 (515)
+.+. +.+||.+|++.++..++..+..+. .||+|+. . ++ +++.+
T Consensus 154 g~l~------------------------~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~--~--~~-~~~~~------- 197 (396)
T TIGR00882 154 GILF------------------------SIDPQIVFWLGSGFALILMLLLMFAKPKAPSS--A--TV-ANALG------- 197 (396)
T ss_pred hhhh------------------------ccCchHHHHHHHHHHHHHHHHHHHhCCCCchh--h--hh-hcccc-------
Confidence 8773 246999999987777665544444 4444321 0 00 00000
Q ss_pred hhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccchhHHHHHHH
Q 010212 263 VELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKI 342 (515)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (515)
++.++++.++.++.++++. ++......+.....+.....+.+.++++...... .+. ...
T Consensus 198 -------~~~~~~~~~~~~~~l~~~~-------~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~---~~~----~~~ 256 (396)
T TIGR00882 198 -------ANASAFSLKLALELFRQRK-------FWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQ---QGT----RVF 256 (396)
T ss_pred -------cccCCCCHHHHHHHHcCCc-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc---cch----HHH
Confidence 0000000011122222221 1111122222222222233334444444221100 000 011
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCcccc
Q 010212 343 ARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTT 422 (515)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (515)
+ .......+..+++.+..+++.||+|+|+.+..+..+.++...+..... +.+.. ....+..+.........
T Consensus 257 g-~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~-------~~~~~-~~~~~l~g~~~~~~~~~ 327 (396)
T TIGR00882 257 G-YVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFAT-------TALEV-VILKMLHAFEVPFLLVG 327 (396)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcC-------ChHHH-HHHHHHHHHHHHHHHHH
Confidence 1 133445556666778899999999999998888777777665544322 22222 22222222222111222
Q ss_pred ccccccccCchhhhhhhhHH-HHHHhhhhHHHHHHHHHHhhhccCchHHHHHHHHHHHHHHHHH
Q 010212 423 TFVVPAEIFPARLRSTCHGI-SAASGKAGAIVGAFGFLYLADTSGVKKALLILGGANFLGMLFT 485 (515)
Q Consensus 423 ~~~~~~~~~p~~~~~~~~g~-~~~~~~~g~~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~ 485 (515)
...+..+..|++.++++.+. .+....+|+++++.+.|++.|..|++.+|.+.+++.++..+..
T Consensus 328 ~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~ 391 (396)
T TIGR00882 328 CFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLIS 391 (396)
T ss_pred HHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 33455666777888877766 6788899999999999999999999999999888877766554
No 89
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.95 E-value=2.9e-27 Score=229.90 Aligned_cols=408 Identities=13% Similarity=0.121 Sum_probs=293.0
Q ss_pred cchhHHHHHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhh
Q 010212 17 TQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMG 96 (515)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~G 96 (515)
...+.|.++...++..+...-....++...+.+++++ +.+.++.+|+.++......+..++.+.+.||+|
T Consensus 40 dGG~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f----------~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg 109 (509)
T KOG2504|consen 40 DGGWGWVVVFASFLVNLSTDGLINSFGLLFEELMDYF----------GSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFG 109 (509)
T ss_pred CCCeeeeeeHhHHHHHHhhhcchheehhhHHHHHHHh----------CCCccHHHHHHHHHHHHHHHhccHHHHHHhhcC
Confidence 5567788888888887766666677788899999999 899999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHH
Q 010212 97 RKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGI 176 (515)
Q Consensus 97 rr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~ 176 (515)
.|.+.+.|.++..++.++.+++++. +..++..-++.|+|.|..+......+..+|+ |+|+.+.|+...+.++|.
T Consensus 110 ~R~v~i~G~~v~~~g~~lssF~~~i-----~~l~lt~gvi~G~G~~~~~~paiviv~~YF~-kkR~lA~Gia~~GsG~G~ 183 (509)
T KOG2504|consen 110 CRTVMIAGGLVAALGLLLSSFATSL-----WQLYLTFGVIGGLGLGLIYLPAVVILGTYFE-KKRALATGIAVSGTGVGT 183 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhhH-----HHHHHHHHHHhhccchhhhcchhhhhhhHhH-HHHHHHHhhhhccCCcce
Confidence 9999999999999999999999993 3455667788999999999999999998886 559999999999999999
Q ss_pred HHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHH-HhcCCchhhHHHHhccHHHHHH
Q 010212 177 LSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWR-MKMPETARYTALVAKNAKQAAA 255 (515)
Q Consensus 177 ~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~-~~~~e~p~~~~~~~~~~~~~~~ 255 (515)
.+-|.+...+. +..|||+.+++.+.+.+-.++.. ..-|.+++.. +. .++..+
T Consensus 184 ~~~~~l~~~l~-----------------------~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~--~~--~~~~~~ 236 (509)
T KOG2504|consen 184 VVFPPLLKYLL-----------------------SKYGWRGALLIFGGISLNVLVAGALLRPLSPPKK--PN--EEKDLR 236 (509)
T ss_pred eeHHHHHHHHH-----------------------HHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCC--ch--hhhhhc
Confidence 99999888886 45669999998666555444433 3334333221 00 000000
Q ss_pred HHHHHH-------Hhhh-------h----HhhhhHHHhhc--C--Ccchhhh---hhhhhhhhHHHHHHHHHHHHHHHHH
Q 010212 256 DMSKVL-------QVEL-------E----AEQEKVEQEKG--K--NDFGLFS---AKFVRRHGLHLIGTTVTWFLLDVAY 310 (515)
Q Consensus 256 ~~~~~~-------~~~~-------~----~~~~~~~~~~~--~--~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (515)
...... +.+. . .+..+.++.++ . ..+..+. ...++. +.++...+...+....+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~--~~fl~~~~~~~~~~~g~ 314 (509)
T KOG2504|consen 237 NSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKD--PKFLLLALSNLFAYLGF 314 (509)
T ss_pred cccccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhhhhHHHHcC--chHHHHHHHHHHHHHHH
Confidence 000000 0000 0 00000000000 0 1111111 122222 34566666666677788
Q ss_pred HHHhhhhhHHHhHhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhch--hhHHHHHHHHHHHHHHHH
Q 010212 311 YSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGR--FAIQLMGFFFMTVFMFAL 388 (515)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~--~~~~~~~~~~~~~~~~~~ 388 (515)
+....++|.+.++.++...+.. .......+..++++++.|++.|+... +....++.++.+++.+.+
T Consensus 315 ~~p~~~l~~~~~~~g~~~~~aa------------~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~ 382 (509)
T KOG2504|consen 315 NVPFVYLPSYAKSLGLSSNDAA------------FLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFL 382 (509)
T ss_pred HHHHHHHHHHHhhcCCChhhhH------------HHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHH
Confidence 8888999999888887766533 37778888999999999999999874 344445555555554333
Q ss_pred HhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccC-c
Q 010212 389 AIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSG-V 467 (515)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g-~ 467 (515)
.... .+..+...++..++...........++.|+.+.+.-..+.|+...+..++..+||.+.|.+.|..| |
T Consensus 383 p~~~--------~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y 454 (509)
T KOG2504|consen 383 PFAT--------TYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNY 454 (509)
T ss_pred HHhc--------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCe
Confidence 3322 334455555555555444455555678999999999999999999999999999999999999888 9
Q ss_pred hHHHHHHHHHHHHHHHHHHhcc
Q 010212 468 KKALLILGGANFLGMLFTFLVP 489 (515)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~ 489 (515)
...|+..+++.+++.++++..+
T Consensus 455 ~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 455 DHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred eeehhhcChHHHHHHHHHHHhH
Confidence 9999999999999988877655
No 90
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.95 E-value=2.6e-25 Score=212.53 Aligned_cols=341 Identities=11% Similarity=0.022 Sum_probs=225.0
Q ss_pred hHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhh-----hhhhH-HHHHHHHHHHHHH
Q 010212 40 FCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKM-----GRKRV-YGMTLMMMVICSL 113 (515)
Q Consensus 40 ~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~-----Grr~~-l~~~~~~~~i~~~ 113 (515)
...++..|.+.+|+ |+|.++.|+.... .+...+ .+++|+++||+ ||||. ++.+.++.++..+
T Consensus 5 ~~~~~~~~~~~~~~----------g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~ 72 (356)
T TIGR00901 5 GLVGNTLPYWLRSK----------NVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLL 72 (356)
T ss_pred hhHHhHHHHHHHHc----------CCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHH
Confidence 45678899999999 9999999999755 555555 99999999998 89887 5677888888877
Q ss_pred HhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 010212 114 ASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKAN 193 (515)
Q Consensus 114 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~ 193 (515)
..++.++.. .++.+....++.+++.+...+...+++.|++|+|+|+++.++...+..+|.++++.+++.+....+.
T Consensus 73 ~l~~~~~~~---~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~- 148 (356)
T TIGR00901 73 ILSFLVPST---DLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFA- 148 (356)
T ss_pred HHHcCCcch---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhccc-
Confidence 777775421 1567778888889888888899999999999999999999999999999999999999888654331
Q ss_pred CCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHH-hcCCchhhHHHHhccHHHHHHHHHHHHHhhhhHhhhhH
Q 010212 194 FPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRM-KMPETARYTALVAKNAKQAAADMSKVLQVELEAEQEKV 272 (515)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~-~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (515)
....+++||..|++.++..++..+..+ ..||+++. ++.+ ++..+.
T Consensus 149 --------------~~~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~~~---~~~~-~~~~~~---------------- 194 (356)
T TIGR00901 149 --------------NTGLITLWGYIFFWTALLILPGLLVTLFLAKEPQED---ASVP-KPLTQA---------------- 194 (356)
T ss_pred --------------ccccccccHHHHHHHHHHHHHHHHHHHHhccCCCcc---cccc-hhHHHH----------------
Confidence 012356799999998877766555544 35664321 0000 000000
Q ss_pred HHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccchhHHHHHHHHHHHHHHHHh
Q 010212 273 EQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKIARAQTLIALC 352 (515)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (515)
..+..++.++++.. +..+...+..+.....++....+.|.+.++.|+++.+ .+........+
T Consensus 195 ---~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~-----------~g~~~~~~~~~ 256 (356)
T TIGR00901 195 ---VLKPIREFFQRKNM----IQALLLLLLIVLYKLGDSAATVLTTLFLLDMGFSKEE-----------IALVAKINGLL 256 (356)
T ss_pred ---HHHHHHHHHHhcCc----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH-----------HHHHhHHHHHH
Confidence 00011111222111 1123333333334455566666777777776665543 22223334445
Q ss_pred hhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccC---CCchHHHHHHHHHHHHHhhcCccccccccccc
Q 010212 353 STVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTL---PDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAE 429 (515)
Q Consensus 353 ~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (515)
..+++.++++++.||+|+|+.+..+.++.++...++......... .....+......+...+......+...++..|
T Consensus 257 ~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 336 (356)
T TIGR00901 257 GAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSK 336 (356)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 677888999999999999998888877776665544432110000 00112222222333333333345677889999
Q ss_pred cCchhhhhhhhHHHHHHhh
Q 010212 430 IFPARLRSTCHGISAASGK 448 (515)
Q Consensus 430 ~~p~~~~~~~~g~~~~~~~ 448 (515)
.+|++.||+.+|+.+...+
T Consensus 337 ~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 337 LSNPKFGATQMALLSSLSA 355 (356)
T ss_pred hcCCCccHHHHHHHHHHHh
Confidence 9999999999999987764
No 91
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.95 E-value=2.2e-24 Score=209.74 Aligned_cols=378 Identities=16% Similarity=0.118 Sum_probs=226.8
Q ss_pred HHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHH
Q 010212 28 AGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMM 107 (515)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~ 107 (515)
+++.....++.....+.+++.+..|+ |-+ ....|+.+.+.++.+++.++.|+++|.||||..++.+.++
T Consensus 49 ~~~~~~~~~~~~~~~a~~l~~I~~di----------G~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l 117 (599)
T PF06609_consen 49 FSLAVIAAYFVLVLPASILPYINADI----------GGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLL 117 (599)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHhc----------CCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHH
Confidence 33434444555566677888999998 554 5678999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 010212 108 MVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVS 187 (515)
Q Consensus 108 ~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~ 187 (515)
..+|++.++.+++ ...++.+..+.|+|.|... .....++|..|.|+|....++.....-.....++.++..+.
T Consensus 118 ~vvG~Iv~atA~~------~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~ 190 (599)
T PF06609_consen 118 GVVGSIVCATAQN------MNTFIAGMVLYGVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFA 190 (599)
T ss_pred HHhHHHHhhcCCc------HHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhc
Confidence 9999999999999 8999999999999977654 55667999999999987766555444343334555554432
Q ss_pred HhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhcCCchhhHHHHhc--cHHHHHHHHHHHH----
Q 010212 188 AAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKMPETARYTALVAK--NAKQAAADMSKVL---- 261 (515)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~--~~~~~~~~~~~~~---- 261 (515)
.+.+|||.|++.++...+.+++.++...+|++...+.+ .+++..++++..-
T Consensus 191 -----------------------~~~~WRw~~~~~~i~~~i~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~ 247 (599)
T PF06609_consen 191 -----------------------AHSGWRWIFYIFIIWSGIALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLF 247 (599)
T ss_pred -----------------------cCCCcchHHHHHHHHHHHHHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHH
Confidence 34569999999877766654443332233332111111 1223233222210
Q ss_pred ---------HhhhhH------hhhhHH---------------HhhcCCc-chhhhhhhhhhhhHHHHHHHHHHHHHHHHH
Q 010212 262 ---------QVELEA------EQEKVE---------------QEKGKND-FGLFSAKFVRRHGLHLIGTTVTWFLLDVAY 310 (515)
Q Consensus 262 ---------~~~~~~------~~~~~~---------------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (515)
..+... ...+.- -|..... ..++-.++++ +.+.+....+..+..+..+
T Consensus 248 ~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~~wE~~~~~~~Pl~P~~Lf~-~~r~~~~~lvi~fi~G~~~ 326 (599)
T PF06609_consen 248 IAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFVVWEWFGAPKDPLFPHRLFK-DRRGFAALLVISFISGMNF 326 (599)
T ss_pred HHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHHHhhhhccCCCCcCCHHHhc-cchHHHHHHHHHHHHHHHH
Confidence 000000 000000 0111111 1222222222 2234455555556666667
Q ss_pred HHHhhhhhHHHhHh-cccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhh-HHHHHHHHHHHHHHHH
Q 010212 311 YSQNLFQKDIFTAI-GWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFA-IQLMGFFFMTVFMFAL 388 (515)
Q Consensus 311 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~-~~~~~~~~~~~~~~~~ 388 (515)
+....+.|...... +-++..... ..........+...|.++.+.+..+++|-| .++.+..++.+++.++
T Consensus 327 ~s~~~l~p~~~~~vf~~d~~~~~~---------~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gam 397 (599)
T PF06609_consen 327 FSVNILWPQQVVNVFGSDPISITE---------IGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGAM 397 (599)
T ss_pred HHHHHHHHHHHhhhccCCCcccce---------eehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHH
Confidence 77766666655442 222211000 111444555566677778888888887644 4456665655544444
Q ss_pred HhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhh
Q 010212 389 AIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLA 462 (515)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~ 462 (515)
.... .+..... + .+.++.+++...........++-..|++.-|++.|+...++.+|+.++..++..+.
T Consensus 398 a~~~----~~n~~~~-i-~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I~ 465 (599)
T PF06609_consen 398 AAVR----PDNKNAA-I-AFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNAIF 465 (599)
T ss_pred HHcc----CCCcchH-H-HHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 4332 1111111 1 11222222111122234455666789999999999999999999999988775543
No 92
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.95 E-value=2.3e-24 Score=193.91 Aligned_cols=385 Identities=15% Similarity=0.056 Sum_probs=266.5
Q ss_pred HHHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHH
Q 010212 23 TAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYG 102 (515)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~ 102 (515)
..+..+...+++.++......+++|.+++.+ +++..|.+++...++.|+.+.+++.|++.+|+|+|+.++
T Consensus 13 ~~~v~~t~lFfl~G~~~~l~diLip~l~~~f----------~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~ 82 (422)
T COG0738 13 LAFVLLTSLFFLWGFITCLNDILIPHLKEVF----------DLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIV 82 (422)
T ss_pred eHHHHHHHHHHHHHHHhhcchhhHHHHHHHh----------CccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHH
Confidence 3445555666777888888899999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHH
Q 010212 103 MTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMV 182 (515)
Q Consensus 103 ~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l 182 (515)
+|+.++++++.+..-+.+. ..+..++++-|+.|.|.+...+.+..+++...++++..+.+++.+...++|.+++|++
T Consensus 83 lgL~l~avg~~lF~pAa~~---~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~ 159 (422)
T COG0738 83 LGLLLYAVGAALFWPAASS---KSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLL 159 (422)
T ss_pred HHHHHHHHHHHHHhhhhhh---hhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHH
Confidence 9999999999998643332 1188999999999999999999999999999999888999999999999999999999
Q ss_pred HHHHHHhhhcCCCCCccCCCCCCcc--ccCCCchHHHHHHHhHHHHHHHHHHHHh--cCCchhhHHHHhccHHHHHHHHH
Q 010212 183 AIIVSAAFKANFPAPIYSANPAAST--VPEADYIWRIILMFGAIPALLTYYWRMK--MPETARYTALVAKNAKQAAADMS 258 (515)
Q Consensus 183 ~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~wr~~f~~~~~~~~~~~~~~~~--~~e~p~~~~~~~~~~~~~~~~~~ 258 (515)
++.+...-... ..++.+.. .......||++|...+...++..+.... .||.++.. .++
T Consensus 160 g~~lils~~~~------~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~--~~~---------- 221 (422)
T COG0738 160 GSSLILSGVAL------TMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAA--PSL---------- 221 (422)
T ss_pred HHHHHHhhhhh------ccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCccc--ccc----------
Confidence 99887521000 00000000 0001223888888866665555544433 33332210 000
Q ss_pred HHHHhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhH-hcccCCcccchhHH
Q 010212 259 KVLQVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTA-IGWIPKAKTMNAIE 337 (515)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 337 (515)
.+.++....+.++.+ .+..-.+..++..........+.+.++.+ .|.+..+
T Consensus 222 --------------~~~~~~~~~~l~~~~-------~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~------- 273 (422)
T COG0738 222 --------------GASGSAGLSSLFQNK-------HLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQ------- 273 (422)
T ss_pred --------------cccccchHHHHHhCh-------HHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHH-------
Confidence 000000112222222 22333444455555566666777777777 3333322
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhc
Q 010212 338 EVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNF 417 (515)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (515)
+........++.++|++++.++.+|+...|.+.....+..+.++...+.. + . ..+......+.++.
T Consensus 274 -----aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~~-------g-~-v~~~~l~~ig~F~s 339 (422)
T COG0738 274 -----AAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALIG-------G-V-VALYALFLIGLFNS 339 (422)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhc-------C-h-HHHHHHHHHHHHhH
Confidence 33377778888999999999999999988887776655555555544433 1 2 22233333444555
Q ss_pred CccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCchHHHHHHHHHHHHHH
Q 010212 418 GPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSGVKKALLILGGANFLGM 482 (515)
Q Consensus 418 ~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~ 482 (515)
..+|+.++...+..| +.. ...|........|+++.|++.|++.|..|....+.....+|.+..
T Consensus 340 imfPTIfslal~~l~-~~t-s~~s~~l~maivGGAiiP~l~G~i~d~~g~~~~~~~~pllc~lyV 402 (422)
T COG0738 340 IMFPTIFSLALKNLG-EHT-SVGSGLLVMAIVGGAIIPPLQGVIADMFGIQLTFLIVPLLCYLYV 402 (422)
T ss_pred HHHHHHHHHHHhccC-ccc-cccceeeeeheecchHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 568899999999998 333 334444455678999999999999999998877776666666665
No 93
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.94 E-value=1.3e-25 Score=226.64 Aligned_cols=403 Identities=14% Similarity=0.145 Sum_probs=257.4
Q ss_pred HHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHH
Q 010212 26 VIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTL 105 (515)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~ 105 (515)
...++..+.........+..++.+.++| +++.++.|++.+.+.++++++.++.|+++||+|||+.+.++.
T Consensus 36 ~~~~~~~~~~~~~~g~~~~~l~~iek~F----------~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ 105 (633)
T TIGR00805 36 LLLTCAQLQGLLYNGLVNSSLTTIERRF----------KLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGC 105 (633)
T ss_pred HHHHHHHHHHHHHHHHHHhhchhhhhhh----------CCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecH
Confidence 4444567777778888999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcC----CCC---------------------------------------c--hhHHHHHHHHHHHhhhc
Q 010212 106 MMMVICSLASGLSF----GKE---------------------------------------P--KAVMITLCFFRFWLGFG 140 (515)
Q Consensus 106 ~~~~i~~~~~~~~~----~~~---------------------------------------~--~~~~~~l~~~r~l~G~~ 140 (515)
++++++++++++.+ .|. . ...+..++++|+++|+|
T Consensus 106 ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG 185 (633)
T TIGR00805 106 AIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIG 185 (633)
T ss_pred HHHHHHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhcc
Confidence 99999999998763 000 0 01256788999999999
Q ss_pred cccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC-C-CCccCCCCCCccccCCCc--hHH
Q 010212 141 IGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANF-P-APIYSANPAASTVPEADY--IWR 216 (515)
Q Consensus 141 ~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~-~-~~~~~~~~~~~~~~~~~~--~wr 216 (515)
.+...+...+++.|++|+++|+++++++..+..+|.++|+++++.+.+...+.. . .++.+.+| .+..| +||
T Consensus 186 ~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~-----~dprWiGaWw 260 (633)
T TIGR00805 186 ATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTP-----TDPRWIGAWW 260 (633)
T ss_pred CCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCC-----CCccHHHHHH
Confidence 999999999999999999999999999999999999999999999886542110 0 00111111 11222 388
Q ss_pred HHHHHhHHHHHHHHHHHHhcCCchhhHHHHhccHHHHHHHHHHHHHhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHH
Q 010212 217 IILMFGAIPALLTYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHL 296 (515)
Q Consensus 217 ~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (515)
..|++.+++.++..+.++++|++.+.. .++.+.++..+... +.+ +++..........+..+.++.... .+.+
T Consensus 261 l~Fli~g~l~~l~~v~l~~~p~~lp~~-~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~Ll~---n~~f 332 (633)
T TIGR00805 261 IGFLICGGVALLTSIPFFFFPKALPKE-GKRVNVDVHETEKL---EKS-EDKSRKKNSDITKDFPKIIKRLLC---NPIY 332 (633)
T ss_pred HHHHHHHHHHHHHHHHHHhCccccCCc-ccccchhhhhhhcc---ccc-ccccchhhhhhHHHHHHHHHHHHc---CcHH
Confidence 889887777776555556666643210 00000000000000 000 000000000000000111111111 1244
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhHHHhH-hcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhc--hhhH
Q 010212 297 IGTTVTWFLLDVAYYSQNLFQKDIFTA-IGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIG--RFAI 373 (515)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g--~~~~ 373 (515)
+...+..+.....++....+.|.++++ .++++... +.+.......+.+++.+++|+++||++ .|+.
T Consensus 333 ~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~a-----------g~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~ 401 (633)
T TIGR00805 333 MLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEA-----------NFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKA 401 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHH-----------HHHhhhhhhhHHHHHHhhhhheeeeecccHHHH
Confidence 555556666667778888899999876 55554432 222223333356788889999999988 4566
Q ss_pred HHHHHHHHHHHHHHHHhh--------------------------h-h--------c------------------------
Q 010212 374 QLMGFFFMTVFMFALAIP--------------------------Y-H--------H------------------------ 394 (515)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~--------------------------~-~--------~------------------------ 394 (515)
+..+.++..++.++.... . . .
T Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~C~~~~~agv~~~y~~~~~~~~~~~~Cn~~C~C~~~~~~PVCg~~~~tY~SpC~AGC~~ 481 (633)
T TIGR00805 402 AYFAICLSTLSYLLCSPLFLIGCESAPVAGVNNPSTDQSIYVENPTDCNRQCSCDSSFFDPVCGDNGLAYLSPCHAGCSM 481 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHeecCCCCccceeeccCCCcccCCCChhccCCCCCCCCCCcccccCCCCCEEECccccCCCC
Confidence 666666555554432210 0 0 0
Q ss_pred ---------ccC--------C---------C---c-hHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHH
Q 010212 395 ---------WTL--------P---------D---H-RIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISA 444 (515)
Q Consensus 395 ---------~~~--------~---------~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~ 444 (515)
+.. . . . ...++++..+..........| ....+.+.+|+++|+.+.|+..
T Consensus 482 ~~~~~~~~~y~~CsCi~~~~~~~a~~g~C~~~C~~~~~~f~~~~~~~~~~~~~~~~p-~~~i~lR~V~~~~rs~alg~~~ 560 (633)
T TIGR00805 482 SVGTGSNMVYTNCSCVQTPGNSSAKKGLCNPPCATSLLYFLILFIPLSFIAFITAVP-LYMVLLRVVNPEEKSLAIGLQW 560 (633)
T ss_pred ccCCCCcceecccccccCCCCCCCcCCCCCcccchhHHHHHHHHHHHHHHHHhccCc-hheEEeeccCcccchHHhhHHH
Confidence 000 0 0 0 111222222222333333334 3456678899999999999998
Q ss_pred HHhhh-hHHHHHHHHHHhhh
Q 010212 445 ASGKA-GAIVGAFGFLYLAD 463 (515)
Q Consensus 445 ~~~~~-g~~i~~~~~~~l~~ 463 (515)
.+.++ |.+-+|+++|.+.|
T Consensus 561 ~~~rllg~iP~pi~fG~~iD 580 (633)
T TIGR00805 561 LCMRVFATIPAPILFGLLID 580 (633)
T ss_pred HHHHHhcCCChhHHHhhhhh
Confidence 87775 77889999999998
No 94
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.94 E-value=6.5e-26 Score=202.12 Aligned_cols=388 Identities=14% Similarity=0.030 Sum_probs=261.1
Q ss_pred HHHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhc-------------cC---------------------------CCCCC
Q 010212 23 TAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYY-------------KE---------------------------GSDSP 62 (515)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-------------~~---------------------------~~~~~ 62 (515)
.++...+.+.+.+.+....+.+.+|....|..+ +. .+..+
T Consensus 21 lilviv~ialllDnmL~~vivPiiP~~L~d~~~~p~~~~~~~~is~~~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~ 100 (464)
T KOG3764|consen 21 LILVIVSIALLLDNMLYTVIVPIIPGYLYDIQAEPTIIQPFFPISTAPIPPGSMSSFSSLNISTESTNASAGKSPAEAIS 100 (464)
T ss_pred eEEEEEehhhhccCccceeeeccCccHHHHhccCCccCccccccccCCCCCccccceecccCCccccccccccCchhccC
Confidence 444555666677776677777777776666542 00 11133
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccc
Q 010212 63 GTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIG 142 (515)
Q Consensus 63 ~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g 142 (515)
.+.+++++|++.+++.+...+.+++.|.+.||+|+|-.+++|+.++..+++++++..+ ++.++++|.+||+|.+
T Consensus 101 ~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~s------y~~l~vAR~LQgvgsA 174 (464)
T KOG3764|consen 101 LDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNS------YPMLFVARSLQGVGSA 174 (464)
T ss_pred ccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcch------hHHHHHHHHHhhhhHH
Confidence 4567789999999999999999999999999999999999999999999999999999 7999999999999999
Q ss_pred cccchhhHhhhhcccccc-chhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHH
Q 010212 143 GDYPLSATIMSEYANKKT-RGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMF 221 (515)
Q Consensus 143 ~~~~~~~~~i~e~~~~~~-r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~ 221 (515)
....+..++++|.+|+++ |++++|+...+.++|.++||++|+.+. +..|.+.+|++
T Consensus 175 ~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilY-----------------------e~~Gk~aPFlV 231 (464)
T KOG3764|consen 175 FADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILY-----------------------EFAGKSAPFLV 231 (464)
T ss_pred HHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchH-----------------------hhcCCcCcHHH
Confidence 999999999999999664 799999999999999999999999995 45568999999
Q ss_pred hHHHHHHHHHHHHhcCCchhhHHHHhccHHHHHHHHHHHHHhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHH
Q 010212 222 GAIPALLTYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTV 301 (515)
Q Consensus 222 ~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (515)
.++++++-..+.+++-|..+. + . .+.++..+.+++++++... .....
T Consensus 232 L~~v~Lld~~L~l~vi~p~~~---~-~-----------------------~~~~~~~~~~~Ll~dP~I~------~~aga 278 (464)
T KOG3764|consen 232 LAIVLLLDGALQLLVIEPTEM---D-P-----------------------DSTEQGTPMWSLLMDPYIL------LIAGA 278 (464)
T ss_pred HHHHHHHHHHHHHheeCcccc---C-c-----------------------cccccCccHHHHHhCchHh------hhhcc
Confidence 988888876666665443211 0 0 0112334455666655432 11111
Q ss_pred HHHHHHHHHHHHhhhhhH-HHhHhcccCC-cccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHH
Q 010212 302 TWFLLDVAYYSQNLFQKD-IFTAIGWIPK-AKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFF 379 (515)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~ 379 (515)
..++. .......--.+. ..++.. ++. +.+. ..+...+...++..+.|.+.||++..+.+.....
T Consensus 279 i~~~n-~~lafLePtlslwm~e~m~-~p~w~~G~------------~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~g 344 (464)
T KOG3764|consen 279 ITFSN-SSLAFLEPTLSLWMLETMF-TPGWEVGL------------AFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGG 344 (464)
T ss_pred hhhcc-chHHHhCcccHHHHHHhcc-CCCcceee------------eecccccchhccCchHHHHHHhcCchhHHHHHHH
Confidence 22221 111111111222 222333 333 3333 5666777888888999999999995444433333
Q ss_pred HHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchh---hhhhhhHHHHHHhhhhHHHHHH
Q 010212 380 FMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPAR---LRSTCHGISAASGKAGAIVGAF 456 (515)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~~~~~~g~~~~~~~~g~~i~~~ 456 (515)
+..++.......... .-...+.......+.+........|... +..|....+ .-|.++++......++.++||.
T Consensus 345 l~~~G~~~~~iP~~~--~~~~L~vp~~~l~~~i~~~dasl~P~l~-~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~ 421 (464)
T KOG3764|consen 345 LATVGVSSGPIPFAT--SIAQLWVPNFGLGFGIGLADASLIPTLG-YLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPT 421 (464)
T ss_pred HHHHHHHhchhHhhh--hHHHHhhhhHHHHHHHHHHHHHHhhhhH-HhcchhhccccceeeeHHHHHHHHHHHhhhcccc
Confidence 333332222222210 0001111122222223333333334332 333333233 5688999999999999999999
Q ss_pred HHHHhhhccCchHHHHHHHHHHHHHHHHHHhcc
Q 010212 457 GFLYLADTSGVKKALLILGGANFLGMLFTFLVP 489 (515)
Q Consensus 457 ~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 489 (515)
+.|.+.+..|+++...+.++..++..-+..+++
T Consensus 422 ~gg~iv~~iGF~wl~~iig~~n~iyapvl~ll~ 454 (464)
T KOG3764|consen 422 FGGSLVEAIGFEWLMTIIGILNLIYAPVLLLLR 454 (464)
T ss_pred ccchheeehhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999888888888776665443
No 95
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.94 E-value=4e-23 Score=199.77 Aligned_cols=378 Identities=13% Similarity=0.066 Sum_probs=236.2
Q ss_pred HHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHH--HHHHHHHHHHHHHHHh-hhhhhhhhhhHH
Q 010212 25 IVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAV--NGVALCGTLAGQLFFG-WLGDKMGRKRVY 101 (515)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~--~s~~~l~~~i~~~~~G-~l~dr~Grr~~l 101 (515)
+..++..++.++.......+.+|...++. |.+.+++|++ .+.+.+...+.+++++ +..||+||||..
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~----------g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~ 72 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLRED----------GAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSW 72 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhH
Confidence 45666778889999999999999999999 9999999997 4677888888888884 479999999987
Q ss_pred HHHHHHH-HHHHHHhh-hcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHH
Q 010212 102 GMTLMMM-VICSLASG-LSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSG 179 (515)
Q Consensus 102 ~~~~~~~-~i~~~~~~-~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g 179 (515)
++...+. ++.....+ +.... .....++..-++.++..+...+...++..|..++++++...+....+..+|.++|
T Consensus 73 i~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g 149 (390)
T TIGR02718 73 VLPMQCLVSACLASLALVGPDV---AGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGG 149 (390)
T ss_pred HHHHHHHHHHHHHHHHcCCcch---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHH
Confidence 5555332 22222222 21110 0023445555666677777778888888999988888888888888888999999
Q ss_pred HHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhcCCchhhHHHHhccHHHHHHHHHH
Q 010212 180 GMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKMPETARYTALVAKNAKQAAADMSK 259 (515)
Q Consensus 180 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~ 259 (515)
+...+.+.+ ..|||..|++.++..++..+..++++|+++. .++++ ++.
T Consensus 150 ~~~~~~l~~-----------------------~~gw~~~f~~~a~l~~~~~~~~~~~~~~~~~--~~~~~-~~~------ 197 (390)
T TIGR02718 150 GAGTLVLFG-----------------------KFGQRPAFLLVACVPLASLVCVLWLKDRAVA--SPEAP-LAR------ 197 (390)
T ss_pred HHHHHHHHH-----------------------HhCHHHHHHHHHHHHHHHHHHHHHcCCCCcC--ccccc-hhh------
Confidence 888887753 3459999999887776655554455443221 00000 000
Q ss_pred HHHhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccchhHHHH
Q 010212 260 VLQVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEV 339 (515)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (515)
..+.++.+|++.. +..... .++..........+.+.++++.|+++++
T Consensus 198 -----------------~~~~~~~l~~~~~----~~~~~~---~~l~~~~~~~~~~~~~~~l~~~G~s~~~--------- 244 (390)
T TIGR02718 198 -----------------RASLFRFFRRPLA----WSLLAL---ALLSAMTAVSGFGLSKLYLVDAGWPLEW--------- 244 (390)
T ss_pred -----------------HHHHHHHHcCcCH----HHHHHH---HHHHHHHHHHHHHHhhHHHHhcCCCHHH---------
Confidence 0011122222211 112222 2222223333344556677777776654
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCc
Q 010212 340 YKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGP 419 (515)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (515)
.+...........+++.++.|++.||+|+|+.+..+..+..+..+........+.. .... ......+...+.....
T Consensus 245 --ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~g~~ 320 (390)
T TIGR02718 245 --IGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLA-PGIA-VAWSCSAFGSLITGIT 320 (390)
T ss_pred --HHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccC-CcHH-HHHHHHHHHHHHHHHH
Confidence 23323333345667778899999999999998887766553332222211111111 1111 1111112211111111
Q ss_pred cccccccccccCch-hhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCchHHHHHHHHHHHHHHHH
Q 010212 420 NTTTFVVPAEIFPA-RLRSTCHGISAASGKAGAIVGAFGFLYLADTSGVKKALLILGGANFLGMLF 484 (515)
Q Consensus 420 ~~~~~~~~~~~~p~-~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~ 484 (515)
.+..++...+..++ +.+++.+++.+...++|..++|.+.|.+.|..|++..|...+++.+++.+.
T Consensus 321 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 321 SVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAILL 386 (390)
T ss_pred HHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHH
Confidence 23344444455554 889999999999999999999999999999999998888877777666544
No 96
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.93 E-value=3.5e-23 Score=183.35 Aligned_cols=369 Identities=17% Similarity=0.134 Sum_probs=276.1
Q ss_pred HHHHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHH
Q 010212 22 FTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVY 101 (515)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l 101 (515)
+..+..+.+..+..--..+.++|+++++.+|+ |+|.+..|++++...+...+.+++..+++.|+|.++.+
T Consensus 11 ~~li~gIvlia~NLR~~itsvgPLL~~Ir~~~----------gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l 80 (395)
T COG2807 11 LLLLAGIVLIAFNLRPAITSVGPLLDEIRQDL----------GLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSL 80 (395)
T ss_pred hHHHHHHHHHHhccchhhhhhhhhHHHHHHHh----------cccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHH
Confidence 44444444555555556677899999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHH
Q 010212 102 GMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGM 181 (515)
Q Consensus 102 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~ 181 (515)
..++++..++.++-... + .+.++.+-.+.|.|.+......+..+.+.+|+| -+..++++....++|..+++.
T Consensus 81 ~~~Llli~~G~~iR~~~-~------~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~-~~~mtglYs~sl~~~aaLaa~ 152 (395)
T COG2807 81 FLALLLIAAGILIRSLG-G------LPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKR-VGLMTGLYSTSLGAGAALAAA 152 (395)
T ss_pred HHHHHHHHHHHHHHhcc-c------HHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccc-hhhHHhHHHHHHHHHHHHHhh
Confidence 99999999999998887 4 588999999999999999999999999999866 799999999999999999999
Q ss_pred HHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhcCCchhhHHHHhccHHHHHHHHHHHH
Q 010212 182 VAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKMPETARYTALVAKNAKQAAADMSKVL 261 (515)
Q Consensus 182 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~ 261 (515)
+...+.+.. .+||....+-+.++++.++.++ |...|. +...
T Consensus 153 lavpla~~~----------------------~gW~~aL~~WAl~allAl~~Wl--Pq~~r~-----~~~~---------- 193 (395)
T COG2807 153 LAVPLAQHS----------------------GGWRGALGFWALLALLALLIWL--PQALRE-----QAAS---------- 193 (395)
T ss_pred hhhHHHHhh----------------------ccHHHHHHHHHHHHHHHHHHHh--hhcccc-----cccc----------
Confidence 999987543 3599999998888888776653 332111 0000
Q ss_pred HhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccchhHHHHHH
Q 010212 262 QVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEVYK 341 (515)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (515)
.+.+.++..+.++++ ..|.+.+.+..++..+|....|+|.++.+.|+++.+.+.
T Consensus 194 -----------~~~~~~~~~~vw~~~-------~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G~sa~~aG~-------- 247 (395)
T COG2807 194 -----------IATKLVSVRKVWRSP-------LAWQVTLFMGLQSLLYYIVIGWLPAILIDRGLSAAEAGS-------- 247 (395)
T ss_pred -----------cccccccccccccCc-------hhHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHhhh--------
Confidence 001111222233333 356677888888899999999999999999999887554
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHhhc-hhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCcc
Q 010212 342 IARAQTLIALCSTVPGYWFTVALIDKIG-RFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPN 420 (515)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~g~l~d~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (515)
......+..++..+....+.+|.. +|+.......++.++.+.+.+.. .+..... .+..+....+.+
T Consensus 248 ----llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P------~~~~~lw---~~llG~G~G~~F 314 (395)
T COG2807 248 ----LLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAP------GQLPILW---ALLLGLGQGGAF 314 (395)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhh------hhHHHHH---HHHHhCccchHH
Confidence 666777788888889999999754 55665666666666665554332 1122222 233333333345
Q ss_pred ccccccccccC-chhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccC-chHHHHHHHHHHHHHHHHHH
Q 010212 421 TTTFVVPAEIF-PARLRSTCHGISAASGKAGAIVGAFGFLYLADTSG-VKKALLILGGANFLGMLFTF 486 (515)
Q Consensus 421 ~~~~~~~~~~~-p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g-~~~~~~~~~~~~~~~~~~~~ 486 (515)
|...+.+.+.. .++..+.-.|+.+.++++-...||.++|++.|..| |...+..+....++..+.-+
T Consensus 315 ~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl 382 (395)
T COG2807 315 PLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGL 382 (395)
T ss_pred HHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHHh
Confidence 55555554444 45777888999999999999999999999999766 66666666555555554444
No 97
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.93 E-value=6.4e-23 Score=202.81 Aligned_cols=404 Identities=11% Similarity=0.062 Sum_probs=233.7
Q ss_pred HhHHHHHHhhhHHHH-HHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhhHHHHHHHH
Q 010212 30 MGFFTDAYDLFCISL-VTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDK-MGRKRVYGMTLMM 107 (515)
Q Consensus 30 ~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr-~Grr~~l~~~~~~ 107 (515)
+..+...+..+.... ....+.+++ |.+.++.+++.+.+........+++|+++|| +|||++++.+.++
T Consensus 28 ~~~~~~~~~~y~~~~~l~~yl~~~l----------g~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~ 97 (500)
T PRK09584 28 SIELWERFGYYGLQGIMAVYLVKQL----------GMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIV 97 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHH
Confidence 333344444333344 445566788 9999999999888877767777899999999 5999999999999
Q ss_pred HHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhcccccc--chhHHHHHHHHHHHHHHHHHHHHHH
Q 010212 108 MVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKT--RGAFIAAVFAMQGFGILSGGMVAII 185 (515)
Q Consensus 108 ~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~--r~~~~~~~~~~~~~G~~~g~~l~~~ 185 (515)
.+++.++++++.+. .+.++++|+++|++.|...+...+++.|++|+++ |..++++++.+.++|..+||.++++
T Consensus 98 ~~ig~~l~~~~~~~-----~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~ 172 (500)
T PRK09584 98 LAIGYALVAWSGHD-----AGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPW 172 (500)
T ss_pred HHHHHHHHHHhccc-----HHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHH
Confidence 99999999887542 5677889999999999989999999999998653 4567888999999999999999999
Q ss_pred HHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHH----HHhcCCchhhHHHHhccHHHHHHHH----
Q 010212 186 VSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYW----RMKMPETARYTALVAKNAKQAAADM---- 257 (515)
Q Consensus 186 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~----~~~~~e~p~~~~~~~~~~~~~~~~~---- 257 (515)
+. +..|||+.|++.++..++.++. ...++|.++....++.+........
T Consensus 173 l~-----------------------~~~g~~~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (500)
T PRK09584 173 LA-----------------------AKYGWSVAFALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVV 229 (500)
T ss_pred HH-----------------------HhhCHHHHHHHHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHH
Confidence 96 3456999999977544443322 2234443111000000000000000
Q ss_pred -----HHHHHhhhhHhhh----------hHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHh
Q 010212 258 -----SKVLQVELEAEQE----------KVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFT 322 (515)
Q Consensus 258 -----~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (515)
......+.+.... ........+. +... ++ ..+.. +..+.....++......+..+.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~---~~~~~-~~~~~~~i~f~~~~~q~~~~l~ 300 (500)
T PRK09584 230 ALIAIATWLLHNQEIARMALGVVALGIVVIFGKEAFAM----KGAA-RR---KMIVA-FILMLEAIIFFVLYSQMPTSLN 300 (500)
T ss_pred HHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhhc----CHHH-HH---HHHHH-HHHHHHHHHHHHHHHHhccHHH
Confidence 0000000000000 0000000000 0011 11 11111 1111222344444444444433
Q ss_pred Hhc---ccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHH----HHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcc
Q 010212 323 AIG---WIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFT----VALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHW 395 (515)
Q Consensus 323 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (515)
..+ .+....+.... . + .......+..++..++. +++.||.+..+.+.+++++.++++..+.......
T Consensus 301 ~~~~~~~~~~~~g~~i~-~----~-~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~ 374 (500)
T PRK09584 301 FFAIRNVEHSILGIAVE-P----E-QYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFA 374 (500)
T ss_pred HHHHHhccccccceEEC-H----H-HHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 211 11111111000 0 0 12223333333333344 4445555555777888888888888876654211
Q ss_pred c-CCCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhh----------c
Q 010212 396 T-LPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLAD----------T 464 (515)
Q Consensus 396 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~----------~ 464 (515)
. ....+.++.+...++.+.+.....|...+++.+..|++.||+++|+......+|..++..+.+.... .
T Consensus 375 ~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~ 454 (500)
T PRK09584 375 NDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSL 454 (500)
T ss_pred CCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhh
Confidence 1 1112233555556666677777788999999999999999999998877766666666666542211 1
Q ss_pred cCchHHHHHHHHHHHHHHHHHH
Q 010212 465 SGVKKALLILGGANFLGMLFTF 486 (515)
Q Consensus 465 ~g~~~~~~~~~~~~~~~~~~~~ 486 (515)
.++...|...++.+++..++.+
T Consensus 455 ~~~~~~f~~~~~~~~~~a~~~~ 476 (500)
T PRK09584 455 EVYGRVFLQIGIATAVIAVLML 476 (500)
T ss_pred hhHHHHHHHHHHHHHHHHHHHH
Confidence 2366777777776665554444
No 98
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.93 E-value=6.6e-22 Score=190.18 Aligned_cols=419 Identities=11% Similarity=0.012 Sum_probs=264.4
Q ss_pred HHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhh----hhhhhhHHHHH-HHHHHH
Q 010212 36 AYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGD----KMGRKRVYGMT-LMMMVI 110 (515)
Q Consensus 36 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~d----r~Grr~~l~~~-~~~~~i 110 (515)
.+......+.++.+.+++ +.+..+.+++..+..+...+.+++.|+++| |+||||.++++ .....+
T Consensus 17 q~~~~l~~~~l~~yl~~l----------g~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~ 86 (477)
T TIGR01301 17 QFGWALQLSLLTPYVQEL----------GIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAF 86 (477)
T ss_pred HHHHHHHHHHHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHH
Confidence 334444556666677788 999999999999999999999999999999 59999997764 666666
Q ss_pred HHHHhhhcCCCCc-----------hhHHHHHHHHHHHhhhccccccchhhHhhhhccccccc--hhHHHHHHHHHHHHHH
Q 010212 111 CSLASGLSFGKEP-----------KAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTR--GAFIAAVFAMQGFGIL 177 (515)
Q Consensus 111 ~~~~~~~~~~~~~-----------~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r--~~~~~~~~~~~~~G~~ 177 (515)
+.++.+++++... ....+.++++-.+..++.....+...+++.|.+|+++| +.+.++.+...++|.+
T Consensus 87 ~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~i 166 (477)
T TIGR01301 87 AVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNV 166 (477)
T ss_pred HHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHH
Confidence 6677777665200 00012233333344557777788889999999998865 5789999999999999
Q ss_pred HHHHHHHHHH--HhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHH-HHHHHhcCCchhhHHHHhccHHHHH
Q 010212 178 SGGMVAIIVS--AAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLT-YYWRMKMPETARYTALVAKNAKQAA 254 (515)
Q Consensus 178 ~g~~l~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~-~~~~~~~~e~p~~~~~~~~~~~~~~ 254 (515)
+|+.+++... ..++..... .++ ..-.+.|..|++.++..++. ++..+..+|.|... .++.++++
T Consensus 167 lg~~~g~~~~~~~~~~~~~~~--------~~~--~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~--~~~~~~~~- 233 (477)
T TIGR01301 167 LGYAAGAYSGLYKIFPFTKTE--------ACG--VSCANLKSCFLIDIILLAILTYIALSAVKENPLIG--SDDFINSE- 233 (477)
T ss_pred HHHHHHHHHhHHHhccccccc--------ccc--cccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCc--cccchhhh-
Confidence 9999998762 211110000 000 01135899999977766664 44556788876421 00000000
Q ss_pred HHHHHHHHhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccch
Q 010212 255 ADMSKVLQVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMN 334 (515)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (515)
.+++ .+.+.....+++++.. ++..+.++.++...++..+.++....|.+.+..+.-+..+.....
T Consensus 234 ----------~~~~---~~~~~~~~~~~i~~~~--~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~ 298 (477)
T TIGR01301 234 ----------AAPP---SKHGEEAFFGELFGAF--KYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGA 298 (477)
T ss_pred ----------cccc---cccchhhhHHHHHHHH--HHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchh
Confidence 0000 0000011122333222 222334555555566666666666666666665422222111122
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhch-hhHHHHHHHHHHHHHHHHHhhhhcc-------------cCCCc
Q 010212 335 AIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGR-FAIQLMGFFFMTVFMFALAIPYHHW-------------TLPDH 400 (515)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~ 400 (515)
..+.+...+........+...+..++..++.+|+|+ |+....+.++.++++....+..... ..+..
T Consensus 299 ~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 378 (477)
T TIGR01301 299 KYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTG 378 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchh
Confidence 344554556667777777777777888999999985 6776888888888877776544210 00001
Q ss_pred hHHHHHHHHHHHHHhhcCccccccccccccCch--hhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccC--chHHHHHHHH
Q 010212 401 RIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPA--RLRSTCHGISAASGKAGAIVGAFGFLYLADTSG--VKKALLILGG 476 (515)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g--~~~~~~~~~~ 476 (515)
............+.......++.++++++..|+ +..|..+|+.|.+..+.+.+..+..|.+.+..| ...++.+.++
T Consensus 379 ~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv 458 (477)
T TIGR01301 379 IKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAV 458 (477)
T ss_pred hHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHH
Confidence 112333333444444444567888999999885 455999999999999999999998888666444 4567777888
Q ss_pred HHHHHHHHHH-hccccC
Q 010212 477 ANFLGMLFTF-LVPESK 492 (515)
Q Consensus 477 ~~~~~~~~~~-~~~~~~ 492 (515)
..+++.++.+ .+|+.+
T Consensus 459 ~~~~aa~~~~~~~~~~~ 475 (477)
T TIGR01301 459 AAFVSGLLALILLPRPR 475 (477)
T ss_pred HHHHHHHHHHHhCCCCC
Confidence 8888888777 666654
No 99
>PTZ00207 hypothetical protein; Provisional
Probab=99.93 E-value=1.2e-22 Score=199.16 Aligned_cols=410 Identities=14% Similarity=0.086 Sum_probs=247.4
Q ss_pred chhHHHHHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhh
Q 010212 18 QWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGR 97 (515)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Gr 97 (515)
..++|..+..........+. .+.++...+.+.+++ |++.++++++.+.. ....+++++.|++.||+||
T Consensus 23 e~~Rw~~lva~~~~~~~~g~-~y~fsv~s~~L~~~l----------gls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~ 90 (591)
T PTZ00207 23 EPRRFALLVLGAFCSICTSF-MYAFNLISGAMQARY----------NLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGP 90 (591)
T ss_pred ccchHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHh----------CcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCc
Confidence 35566665555554444433 356677889999999 99999999998874 4556788899999999999
Q ss_pred hhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHH
Q 010212 98 KRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGIL 177 (515)
Q Consensus 98 r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~ 177 (515)
|+++.++.+++.++.++++++.+..-..+++.+++.|++.|+|.+...+.....+.+|+| ++||++.++...+.++|.+
T Consensus 91 R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsa 169 (591)
T PTZ00207 91 RPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSA 169 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHH
Confidence 999999999999999999997210000118999999999999999888999999999997 6799999999999999998
Q ss_pred HH-HHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHH-HHHHHHhcCCch--hhHHHHh-ccHHH
Q 010212 178 SG-GMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALL-TYYWRMKMPETA--RYTALVA-KNAKQ 252 (515)
Q Consensus 178 ~g-~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~-~~~~~~~~~e~p--~~~~~~~-~~~~~ 252 (515)
+. ++..+++. .+|+..|++.++..++ .++...++++.| ++...++ .++++
T Consensus 170 I~~~l~~~l~~-------------------------~~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~ 224 (591)
T PTZ00207 170 ILGSIQLAFFS-------------------------DNTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEE 224 (591)
T ss_pred HHHHHHHHHHH-------------------------HhHHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHH
Confidence 64 44444442 1377777775555544 444445554443 3210110 01111
Q ss_pred HH-HHHHHH--------------------------------------------------H------H----------hhh
Q 010212 253 AA-ADMSKV--------------------------------------------------L------Q----------VEL 265 (515)
Q Consensus 253 ~~-~~~~~~--------------------------------------------------~------~----------~~~ 265 (515)
.. +...+. . . .+.
T Consensus 225 ~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~v~~~lll~~p~l~ip~~~~~~~~ 304 (591)
T PTZ00207 225 KAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPLQGALVAYLKLGSNFKVGFAVTVIVLTVIFPFMAFPLTTFDGKR 304 (591)
T ss_pred HHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCC
Confidence 11 000000 0 0 000
Q ss_pred hHhhhhHHH------------hhc-----------CCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHh
Q 010212 266 EAEQEKVEQ------------EKG-----------KNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFT 322 (515)
Q Consensus 266 ~~~~~~~~~------------~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (515)
++++++.++ ++. +...+.+..... ...+|++....++.............++.+
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~t~~q~l~---~~d~Wll~~~~~cg~g~gl~~~~N~~qI~~ 381 (591)
T PTZ00207 305 PHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYIAPQFQETFIEGLK---TARLWCLLWSIFCCVGAHFVIIFNARFIYT 381 (591)
T ss_pred cCCCccccccccccccccccccccccccccccCCCCCCcchHHHHHh---chhHHHHHHHHHHhhCchheeeecHHHHHH
Confidence 000000000 000 000001111111 234566666666655444555555666667
Q ss_pred Hh-cccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhh--------HHHHHHHHHHHHHHHHHhhhh
Q 010212 323 AI-GWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFA--------IQLMGFFFMTVFMFALAIPYH 393 (515)
Q Consensus 323 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~--------~~~~~~~~~~~~~~~~~~~~~ 393 (515)
.+ |+.++... .........+++.+|++..|+++....+|+ ..+....++.++.+++....
T Consensus 382 sl~g~~~~~~~----------~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~~~~~~lll~~~~- 450 (591)
T PTZ00207 382 ALAGEAPDDAL----------NTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSVCIITMLTLFLTL- 450 (591)
T ss_pred HhcCCCCCccc----------eeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHHHHHHHHHHHHHC-
Confidence 76 55222200 000345667778888888888773322222 22222222444444443332
Q ss_pred cccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHH-HHHHHHhhhcc-------
Q 010212 394 HWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVG-AFGFLYLADTS------- 465 (515)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~-~~~~~~l~~~~------- 465 (515)
+...+.+..++.+++.....++....++|+|. ++-|+-+-+.....-+|..+- -.+.|.++|..
T Consensus 451 -------p~~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~ 522 (591)
T PTZ00207 451 -------PKAALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQD 522 (591)
T ss_pred -------CccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 11233333444444444456777788899999 888887777777777777665 56778888732
Q ss_pred ---C---chHHHHHHHHHHHHHHHHHHh
Q 010212 466 ---G---VKKALLILGGANFLGMLFTFL 487 (515)
Q Consensus 466 ---g---~~~~~~~~~~~~~~~~~~~~~ 487 (515)
| ++..|++.+++++.+.+....
T Consensus 523 ~C~G~~C~~~~~~v~~~~~~~g~~~s~~ 550 (591)
T PTZ00207 523 VCTERVCVVMPLAFLLGLSFLAFITSTY 550 (591)
T ss_pred eeCCceeeHhHHHHHHHHHHHHHHHHhh
Confidence 1 677899999999999888763
No 100
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.90 E-value=1.5e-20 Score=181.59 Aligned_cols=407 Identities=11% Similarity=-0.011 Sum_probs=225.6
Q ss_pred HHHHhHHHHHHhhhHHHHHHhh-hhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhh-hhhhHHHHH
Q 010212 27 IAGMGFFTDAYDLFCISLVTKL-LGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKM-GRKRVYGMT 104 (515)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~-Grr~~l~~~ 104 (515)
.+++..+...+..+.....+|. +.+++ |.++.+.+.+.+.+.....++.+++|+++||+ ||||+++++
T Consensus 13 ~l~~~~~~e~fs~Yg~~~~L~~yL~~~l----------gls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG 82 (493)
T PRK15462 13 YVVALQIWEYFSFYGMRALLILYLTNQL----------KYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLG 82 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHH
Confidence 3333334444444444444444 45667 89999999999999999999999999999999 999999999
Q ss_pred HHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccc--cchhHHHHHHHHHHHHHHHHHHH
Q 010212 105 LMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKK--TRGAFIAAVFAMQGFGILSGGMV 182 (515)
Q Consensus 105 ~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~--~r~~~~~~~~~~~~~G~~~g~~l 182 (515)
.++..++.++.+...+. ...++++..+.++|.|...+...++++|.+|++ +|..+.++.+.+.++|..++|.+
T Consensus 83 ~il~~lg~lll~~~~~~-----~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l 157 (493)
T PRK15462 83 ALLMAIGHVVLGASEIH-----PSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIA 157 (493)
T ss_pred HHHHHHHHHHHHHhhcc-----hhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHH
Confidence 99999998877654321 233444444555666777788889999999875 69999999999999999999999
Q ss_pred HHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhcC----CchhhHHHHhccHHHHHHHHH
Q 010212 183 AIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKMP----ETARYTALVAKNAKQAAADMS 258 (515)
Q Consensus 183 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~----e~p~~~~~~~~~~~~~~~~~~ 258 (515)
.+++. +..||++.|.++++..++.++.++... +..... .++.++++......
T Consensus 158 ~g~L~-----------------------~~~Gw~~~F~iaaigm~l~li~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~ 213 (493)
T PRK15462 158 CGYAQ-----------------------EEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTRGVN-KKVLRATNFLLPNW 213 (493)
T ss_pred HHHHH-----------------------hhhChHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCC-CCCchhhhHHHHHH
Confidence 99985 445699999987665554444333221 110000 00000000000000
Q ss_pred H-----------HHHhhhhHhhhh-HHH-hh--------cCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhh
Q 010212 259 K-----------VLQVELEAEQEK-VEQ-EK--------GKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQ 317 (515)
Q Consensus 259 ~-----------~~~~~~~~~~~~-~~~-~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (515)
. .......+.... .-. .. .....+ .++.. |++....+.+.+........+.....-.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~e-r~r~~~~~~l~~~~~~Fw~~~~Q~~~sl 291 (493)
T PRK15462 214 GWLLVLLVATPALITVLFWKEWSVYALIVATIIGLGVLAKIYRKA-ENQKQ-RKELGLIVTLTFFSMLFWAFAQQGGSSI 291 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCHHH-HhhHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 0 000000000000 000 00 000000 00011 1111111111111111111111111111
Q ss_pred hHHHhHhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhch--h-----hHHHHHHHHHHHHHHHHHh
Q 010212 318 KDIFTAIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGR--F-----AIQLMGFFFMTVFMFALAI 390 (515)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~--~-----~~~~~~~~~~~~~~~~~~~ 390 (515)
..+.++ +.+.+..+.+. ..+. ......+..++..++..++-.|..| | .-..++.++++++++.+.+
T Consensus 292 ~lfa~~-~vd~~~~g~~i-----p~~~-~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~ 364 (493)
T PRK15462 292 SLYIDR-FVNRDMFGYTV-----PTAM-FQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTL 364 (493)
T ss_pred HHHHHH-hccchhcceee-----CHHH-HHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 122211 11111111110 0111 2334444444455555555555522 2 1256788888888777765
Q ss_pred hhhcccC-CCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHh-hhhHHHHHHHHHHhhhc----
Q 010212 391 PYHHWTL-PDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASG-KAGAIVGAFGFLYLADT---- 464 (515)
Q Consensus 391 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~-~~g~~i~~~~~~~l~~~---- 464 (515)
....... ...+..+++...++...+.....|+..+.++++.|++.+|..+|+..... .++..++..+.+...+.
T Consensus 365 ~~~~~~~~~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~~~~~~~~~~~~ 444 (493)
T PRK15462 365 SARWSAMYGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQTSQASFDA 444 (493)
T ss_pred HHhhcCCCCCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCc
Confidence 4432221 12345556666677788889999999999999999999999999996643 46666665555544210
Q ss_pred --------cCchHHHHHHHHHHHHH
Q 010212 465 --------SGVKKALLILGGANFLG 481 (515)
Q Consensus 465 --------~g~~~~~~~~~~~~~~~ 481 (515)
..+...|...+...+++
T Consensus 445 ~~~~~~~~~~~~~~f~~~~~~~~~~ 469 (493)
T PRK15462 445 SGAINYSINAYIEVFDQITWGALAC 469 (493)
T ss_pred cccccchhhhHHHHHHHHHHHHHHH
Confidence 12445666666655555
No 101
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.90 E-value=5e-21 Score=189.22 Aligned_cols=368 Identities=10% Similarity=0.013 Sum_probs=217.8
Q ss_pred hHHHHHHhhhHHHH-HHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhh----hhhhh-hHHHHH
Q 010212 31 GFFTDAYDLFCISL-VTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGD----KMGRK-RVYGMT 104 (515)
Q Consensus 31 ~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~d----r~Grr-~~l~~~ 104 (515)
+.+...+....++. +...+.+.+ +++...+|.+..+.-+.-++..|+.|+++| |+||| +.++.+
T Consensus 14 g~~~~~~~~~~~~~~l~~yyt~v~----------Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g 83 (473)
T PRK10429 14 GAFGKDFAIGIVYMYLMYYYTDVV----------GLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIG 83 (473)
T ss_pred chhHHhHHHHHHHHHHHHHHHHhc----------CCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhh
Confidence 33333333344444 345555666 999999999999999999999999999999 66995 556778
Q ss_pred HHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhcc-ccccchhHHHHHHHHHHHHHHHHHHHH
Q 010212 105 LMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYA-NKKTRGAFIAAVFAMQGFGILSGGMVA 183 (515)
Q Consensus 105 ~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~-~~~~r~~~~~~~~~~~~~G~~~g~~l~ 183 (515)
....+++.+++...++.++...+..+++..++.+++.........++..|.. ++++|.+..++-..+.++|..+.+.+.
T Consensus 84 ~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~ 163 (473)
T PRK10429 84 TLANSVVLFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFT 163 (473)
T ss_pred hHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8887777666644443211112445666777778888888888899999999 589999999987777777766666665
Q ss_pred HHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHH-HHHhcCCchhhHHHHhccHHHHHHHHHHHHH
Q 010212 184 IIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYY-WRMKMPETARYTALVAKNAKQAAADMSKVLQ 262 (515)
Q Consensus 184 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~-~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~ 262 (515)
..+....+. ..+..+|+....+.++..++..+ ..+..+|.++.. ..+.
T Consensus 164 ~~~~~~~g~----------------~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~~--~~~~------------- 212 (473)
T PRK10429 164 LPFVNYVGG----------------GDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVYSSD--NQVS------------- 212 (473)
T ss_pred HHHHHHhCC----------------CchhhhHHHHHHHHHHHHHHHHHHHHcCceecCCcc--cccc-------------
Confidence 544433331 01234688887776666555433 334466643210 0000
Q ss_pred hhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccchhHHHHHHH
Q 010212 263 VELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKI 342 (515)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (515)
+++++.+.++.++....++. ++......+......+....+.+++.+.....+. ..
T Consensus 213 ----------~~~~~~~~~~~~~~~~~n~~---~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~~~~-----------~~ 268 (473)
T PRK10429 213 ----------AEGSHLTLKDIVALIYKNDQ---LSCLLGMALAYNIASNIINGFAIYYFTYVIGDAD-----------LF 268 (473)
T ss_pred ----------ccccCCCHHHHHHHHhcCHH---HHHHHHHHHHHHHHHHHHhhheeeEEEEECCCHH-----------HH
Confidence 00111223333332222222 2222222222223333333333333322111100 01
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCcccc
Q 010212 343 ARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTT 422 (515)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (515)
+ .......+..+++.++.+++.||+|+|+.+..+..+..++.+.+..... . .+ .......+..++.+.......+.
T Consensus 269 ~-~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~-~-~~-~~~~~~~i~~~l~g~~~~~~~~~ 344 (473)
T PRK10429 269 P-YYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGL-A-AP-HNALLIVIAGILLNIGTALFWVL 344 (473)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhc-c-Cc-hhHHHHHHHHHHHHHHHHHHHHH
Confidence 1 2334445667788889999999999999988777665555544432210 0 11 12222222223333333333456
Q ss_pred ccccccccCc-------hhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCc
Q 010212 423 TFVVPAEIFP-------ARLRSTCHGISAASGKAGAIVGAFGFLYLADTSGV 467 (515)
Q Consensus 423 ~~~~~~~~~p-------~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~ 467 (515)
.+++.+|..+ .+..|...|....+..++..+++.+.|.+.+..||
T Consensus 345 ~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 345 QVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 6677888855 34456689999999999999999999999986665
No 102
>PRK09669 putative symporter YagG; Provisional
Probab=99.90 E-value=8.4e-21 Score=186.56 Aligned_cols=347 Identities=10% Similarity=0.062 Sum_probs=213.7
Q ss_pred HHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhh----hhhhh-HHHHHHHHHHHHHHHhhhc
Q 010212 44 LVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDK----MGRKR-VYGMTLMMMVICSLASGLS 118 (515)
Q Consensus 44 ~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr----~Grr~-~l~~~~~~~~i~~~~~~~~ 118 (515)
.+...+.+++ |++..+.|.+.++..+..++..|+.|+++|| +|||| .++.+.+..+++.++....
T Consensus 31 ~l~~~~t~~~----------gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~ 100 (444)
T PRK09669 31 FLAYFYTDVF----------GLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYT 100 (444)
T ss_pred HHHHHHHHhc----------CCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhC
Confidence 4455666777 9999999999999999999999999999998 78855 4667777777777666666
Q ss_pred CCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhcc-ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCC
Q 010212 119 FGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYA-NKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFPAP 197 (515)
Q Consensus 119 ~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~-~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~~~ 197 (515)
++.+....+..+++..++.+.+.........++.+|+. ++++|++..+....+..+|..+++.+...+....+.+
T Consensus 101 p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~---- 176 (444)
T PRK09669 101 PDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKG---- 176 (444)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----
Confidence 54332233566677777777766677777789999998 5688999999988888999888888776665544320
Q ss_pred ccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHH-HHhcCCchhhHHHHhccHHHHHHHHHHHHHhhhhHhhhhHHHhh
Q 010212 198 IYSANPAASTVPEADYIWRIILMFGAIPALLTYYW-RMKMPETARYTALVAKNAKQAAADMSKVLQVELEAEQEKVEQEK 276 (515)
Q Consensus 198 ~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~-~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (515)
....+|+..+.+.++.+++..+. .+..+|.++. ++ ++
T Consensus 177 ------------~~~~g~~~~~~i~~ii~~v~~~~~~~~~~e~~~~-----~~-------------------------~~ 214 (444)
T PRK09669 177 ------------DEQKGYFYAMMVMGLLGVVLFFCCFFMTKERYTP-----EV-------------------------DN 214 (444)
T ss_pred ------------chhhhHHHHHHHHHHHHHHHHHHHhCCeEEecCC-----CC-------------------------cC
Confidence 23467998888877666554443 3334443211 00 00
Q ss_pred cCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccchhHHHHHHHHHHHHHHHHhhhhh
Q 010212 277 GKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVP 356 (515)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (515)
+.+.++.++....++..+.++...+ ..............++.+. .+... ...........+..++
T Consensus 215 ~~~~~~~~~~~~~n~~~~~l~~~~~---~~~~~~~~~~~~~~y~~~~-~~~~~-----------~~~~~~~~~~~i~~ii 279 (444)
T PRK09669 215 SSSVWKDLKLLLGNSQWRIMFIFNV---VLLTAVVTRGGATLYYVNY-VLLRP-----------DLATLFLVTGMIAGLF 279 (444)
T ss_pred CCCHHHHHHHHhCCchHHHHHHHHH---HHHHHHHHHhhhhheeeee-ecCCH-----------HHHHHHHHHHHHHHHH
Confidence 0111111222222222222222111 1111111111112222111 11110 0111233445566777
Q ss_pred HHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCc----
Q 010212 357 GYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFP---- 432 (515)
Q Consensus 357 ~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---- 432 (515)
+.++.+++.||+|+|+....+..+..++...+.... + +......+..++.+.......+..+++.+|..+
T Consensus 280 ~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~ 353 (444)
T PRK09669 280 GALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIP-----P-SNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEK 353 (444)
T ss_pred HHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhC-----c-chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 888899999999999998877665554333222211 1 122223333333444444456777888888875
Q ss_pred ---hhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCc
Q 010212 433 ---ARLRSTCHGISAASGKAGAIVGAFGFLYLADTSGV 467 (515)
Q Consensus 433 ---~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~ 467 (515)
++..|...|..+.+..+|..+++.+.|.+.+..||
T Consensus 354 ~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 354 RSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred hcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 23456778999999999999999999999987776
No 103
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.90 E-value=1.9e-20 Score=178.20 Aligned_cols=370 Identities=16% Similarity=0.178 Sum_probs=235.2
Q ss_pred hHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhh-hhhHHHHHHHHHH
Q 010212 31 GFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMG-RKRVYGMTLMMMV 109 (515)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~G-rr~~l~~~~~~~~ 109 (515)
.+++..+....+.|..+...++. +.|.+|+|.+.+...+...++++++|.++||++ +||++.+..++.+
T Consensus 10 ~~f~~f~~~G~~~p~~~~~L~~~----------G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~ 79 (400)
T PF03825_consen 10 MYFLYFFAYGAFLPYLPLYLESR----------GFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSA 79 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHH
Confidence 34445555566667777777777 999999999999999999999999999999986 5777877777777
Q ss_pred HHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHH-HHHHHH
Q 010212 110 ICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMV-AIIVSA 188 (515)
Q Consensus 110 i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l-~~~l~~ 188 (515)
+........++ ++.+++.-++..+......|...++..+...+ +++-.|-.-...++|.+++... +..+..
T Consensus 80 ~~~~~~~~~~~------f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~--~~~~YG~iRlwGSiGf~~~~~~~~~~~~~ 151 (400)
T PF03825_consen 80 LALLLLAFSSS------FWWLFVIMLLFSFFFSPTMPLSDSIALSYLGD--RGKDYGRIRLWGSIGFIVAALAFGGLLGG 151 (400)
T ss_pred HHHHHHHHhcc------HHHHHHHHHHHHHHHccHHHHHHHHHHHHccc--ccCCCCcchhhhhHHHHHHHHHHHHHHHh
Confidence 77777777777 78888888888888888888888888888753 3334444555666777666544 222222
Q ss_pred hhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhcCCchhhHHHHhccHHHHHHHHHHHHHhhhhHh
Q 010212 189 AFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVELEAE 268 (515)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (515)
..+ ..+....+++.+...++.....+.+|+.|+. .++++..+
T Consensus 152 ~~~--------------------~~~~~~~~~i~~~~~~ll~~~~l~lp~~~~~--~~~~~~~~---------------- 193 (400)
T PF03825_consen 152 YLG--------------------ISGTSLIFYIAAILSLLLAGFALFLPKTPPK--RSAKESVK---------------- 193 (400)
T ss_pred hhc--------------------cccccHHHHHHHHHHHHHHHHHHhCCCCccc--cccCCCcc----------------
Confidence 111 1123345555555555555555668887632 00000000
Q ss_pred hhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhHhc-ccCCcccchhHHHHHHHHHHHH
Q 010212 269 QEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTAIG-WIPKAKTMNAIEEVYKIARAQT 347 (515)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 347 (515)
+....+.++++|++.. ....+..+...........+.+.++++.| +.... .....
T Consensus 194 -----~~~~~~~~~llk~~~~-------~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~------------~g~~~ 249 (400)
T PF03825_consen 194 -----KLLGLDALKLLKNPRF-------LVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGST------------IGILW 249 (400)
T ss_pred -----cccchHHHHHhcCccH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhH------------HHHHH
Confidence 0000111222333221 12222223333344445556677777766 33222 22245
Q ss_pred HHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHH---HHHHHhhcCcccccc
Q 010212 348 LIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYS---LTFFFSNFGPNTTTF 424 (515)
Q Consensus 348 ~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 424 (515)
....++.++.-...+++.+|+|.|+++.++.+..++=..++..... +.+....... +..+...........
T Consensus 250 ~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~------~~~~~~~~~~l~q~lhG~tf~~~~~a~~ 323 (400)
T PF03825_consen 250 ALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSD------PWPFIVALQLLGQLLHGLTFGLFHAASV 323 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcC------CcHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 5677788898899999999999999999999888888877765421 1121111111 122322222344566
Q ss_pred ccccccCchhhhhhhhHHHHHH-hhhhHHHHHHHHHHhhhccCchH------HHHHHHHHHHHHHHHHH
Q 010212 425 VVPAEIFPARLRSTCHGISAAS-GKAGAIVGAFGFLYLADTSGVKK------ALLILGGANFLGMLFTF 486 (515)
Q Consensus 425 ~~~~~~~p~~~~~~~~g~~~~~-~~~g~~i~~~~~~~l~~~~g~~~------~~~~~~~~~~~~~~~~~ 486 (515)
.++.+..|++.|+++.++++.. ..+|..+|..+.|++.|..|.+. .+.+.+++.++..++..
T Consensus 324 ~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~ 392 (400)
T PF03825_consen 324 RYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFV 392 (400)
T ss_pred HHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 7889999999999999999876 46899999999999999877654 34444444444444444
No 104
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.89 E-value=2e-19 Score=174.38 Aligned_cols=372 Identities=13% Similarity=0.115 Sum_probs=246.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhH-HHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhcccccc
Q 010212 67 DNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRV-YGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDY 145 (515)
Q Consensus 67 ~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~-l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~ 145 (515)
.+..++..++..+-.++..|+.|.++|+-|+||. +.....+..+++.+..+.+.. .++...+.-++.-++.+...
T Consensus 69 ~s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~----~~~~~~~l~iia~v~~~~~~ 144 (477)
T PF11700_consen 69 SSLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPG----QWWLALVLFIIANVGYEASN 144 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcc----hHHHHHHHHHHHHHHHHHHH
Confidence 3456788999999999999999999999997765 555556666677777765321 15555566666667777778
Q ss_pred chhhHhhhhccccccc--------------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcc
Q 010212 146 PLSATIMSEYANKKTR--------------------------GAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFPAPIY 199 (515)
Q Consensus 146 ~~~~~~i~e~~~~~~r--------------------------~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~~~~~ 199 (515)
....+++.|..+++++ ++..+.-.....+|.++.-++...+....+..
T Consensus 145 vfyna~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~------ 218 (477)
T PF11700_consen 145 VFYNAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGST------ 218 (477)
T ss_pred HHHHHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCc------
Confidence 8899999999999888 89999888888888888877776665433321
Q ss_pred CCCCCCccccCCCchHHHHHHHhHHHHH-HHHHHHHhcCCchhhHHHHhccHHHHHHHHHHHHHhhhhHhhhhHHHhhcC
Q 010212 200 SANPAASTVPEADYIWRIILMFGAIPAL-LTYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVELEAEQEKVEQEKGK 278 (515)
Q Consensus 200 ~~~~~~~~~~~~~~~wr~~f~~~~~~~~-~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (515)
..+..+-|..+.+.++.-+ ..+..++++||.|+.. ..++.........+
T Consensus 219 ---------~~~~~~~r~~~~~~a~ww~vfsiP~~~~~~~~~~~~-~~~~~~~~~~~g~~-------------------- 268 (477)
T PF11700_consen 219 ---------ASNTWAIRVAFLIVALWWLVFSIPLFLWLPDRPGPR-PLPSGSSYLRFGFK-------------------- 268 (477)
T ss_pred ---------cccchhhhHHHHHHHHHHHHHHHHHHHhCCCCCCCC-CCCcchhHHHHHHH--------------------
Confidence 1234557888888666544 4566778889887520 11111110001111
Q ss_pred CcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHh-HhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhH
Q 010212 279 NDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFT-AIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPG 357 (515)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (515)
+.++.+|+... .+.+...++.+++..-.......+...+.. .+|+++.+... ..+...+..++|
T Consensus 269 ~l~~t~k~~~~---~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~------------~~l~~~i~a~~G 333 (477)
T PF11700_consen 269 RLWRTFKEIRK---LRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIV------------FGLVVQIVAIIG 333 (477)
T ss_pred HHHHHHHHHHh---ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHH------------HHHHHHHHHHHH
Confidence 11111222111 123333444455444444444444555544 46776655322 666677788899
Q ss_pred HHHHHHHHHhhchh--hHHHHHHHHHHHHHHHHHh--hhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCch
Q 010212 358 YWFTVALIDKIGRF--AIQLMGFFFMTVFMFALAI--PYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPA 433 (515)
Q Consensus 358 ~~~~g~l~d~~g~~--~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 433 (515)
.++.+++.||+|.| +.+........+..+...+ ... .... ...+...+..+..+....+..+..-++.+|+.|+
T Consensus 334 a~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~-~~g~-~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~ 411 (477)
T PF11700_consen 334 ALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPS-FFGL-KSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPP 411 (477)
T ss_pred HHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhc-ccCc-ccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCC
Confidence 99999999999988 7766665555333222222 110 0011 1222344444555555666678888999999999
Q ss_pred hhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccC-chHHHHHHHHHHHHHHHHHHhccccCCCC
Q 010212 434 RLRSTCHGISAASGKAGAIVGAFGFLYLADTSG-VKKALLILGGANFLGMLFTFLVPESKGKS 495 (515)
Q Consensus 434 ~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (515)
++.+..+|++...+...+++||.++|.+.+..| .+..+....++.+++.++.+.++..|.++
T Consensus 412 g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v~~~~g~~ 474 (477)
T PF11700_consen 412 GREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFVDVEKGRE 474 (477)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccchhhhh
Confidence 999999999999999999999999999999887 78889888888888888887776665543
No 105
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.89 E-value=2.6e-21 Score=189.80 Aligned_cols=402 Identities=12% Similarity=0.057 Sum_probs=238.9
Q ss_pred HHHHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhh-----
Q 010212 22 FTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMG----- 96 (515)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~G----- 96 (515)
...+.++...++..+........+.+.+.+++ |++.++++...+...+...+-.+ +|+++||++
T Consensus 25 ~~~~~~~~~~y~~qGl~~l~~~~~~~~l~~~l----------g~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~r 93 (468)
T TIGR00788 25 RVVLAIGLQVLFVKGIAGLMRLPLSPMLTDDL----------GLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYT 93 (468)
T ss_pred chHHHHHHHHHHHhhHHHHhhhhhhHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCcc
Confidence 34555666677888887444445566677788 99999999999999999999666 999999998
Q ss_pred hhhHHHHHHHHHH-HHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhH---HHHHHHHH
Q 010212 97 RKRVYGMTLMMMV-ICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAF---IAAVFAMQ 172 (515)
Q Consensus 97 rr~~l~~~~~~~~-i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~---~~~~~~~~ 172 (515)
||+.++++.++.+ +.....+..++. .....+.+++.+++.+...++..++..|..+ +++... .+......
T Consensus 94 Rr~~l~~~~~l~~~~~~~~l~~~~~~-----~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~ 167 (468)
T TIGR00788 94 KRWYLVLSGLLGSAILYGLLPGKVSS-----AKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGAS 167 (468)
T ss_pred chHHHHHHHHHHHHHHHHhcccccch-----HHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHH
Confidence 7777777777763 333333333341 3444458999999999999999999999998 544443 33344445
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhcCCchhhHHHHhccHHH
Q 010212 173 GFGILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKMPETARYTALVAKNAKQ 252 (515)
Q Consensus 173 ~~G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~ 252 (515)
++|.++|+.+++.+.+ ..+||..|++.+...++..+..++++|++.. ...+..++
T Consensus 168 ~~G~~vg~~l~G~l~~-----------------------~~~~~~~f~~~a~l~ll~~~~~~~~~E~~~~--~~~~~~~~ 222 (468)
T TIGR00788 168 ATGGLISSLLGGPLLD-----------------------KTLTRILFLITAALLLLQLFVSNLSKERRAF--VRPRIGTY 222 (468)
T ss_pred HHHHHHHHHHHHHHHH-----------------------hcCcchHHHHHHHHHHHHHHHHHhccccccc--cccccccc
Confidence 6899999999998863 3459999999777766666566778886421 00000000
Q ss_pred HHHHHHHHHHhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHH-HHHHHHHHHHHhhhhhHHHhHhcccCCcc
Q 010212 253 AAADMSKVLQVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVT-WFLLDVAYYSQNLFQKDIFTAIGWIPKAK 331 (515)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (515)
......... ....+..++...+.++.++++.. +..+...+. +.. ........+. ...+..|+++...
T Consensus 223 ~~~~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~i----~~~l~fifl~~~~--~~~~~~~~f~-~~~~~lG~s~~~~ 290 (468)
T TIGR00788 223 LEMNMALLT-----LGVLANVKVQILGLRGAIQLLEI----AKPLIFIFLSYAN--LPGASGSVFC-ATTQCLPGGPSFS 290 (468)
T ss_pred chhhhhhhh-----hhHHHHHHHHHHHHHHHHhcHHH----HHHHHHHHHHHhh--cCCCCceeEE-EEcccCCCCcchh
Confidence 000000000 00000000000111111221111 111111111 110 0000000000 1112356666654
Q ss_pred cchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCC---CchHHHHHHH
Q 010212 332 TMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLP---DHRIGFVVLY 408 (515)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 408 (515)
+. ......++.+++....+++.+|++.|+.+.++.++.+++..........+... ...+......
T Consensus 291 G~------------~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~ 358 (468)
T TIGR00788 291 GM------------SKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDS 358 (468)
T ss_pred hh------------HHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehh
Confidence 44 45556688888888999999999999999888888777665533221111100 1111222222
Q ss_pred HHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccC-----chHHHHHHHHHHHHH--
Q 010212 409 SLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSG-----VKKALLILGGANFLG-- 481 (515)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g-----~~~~~~~~~~~~~~~-- 481 (515)
.+.....+.... ....++.+..|++.+|+..++.+.+.++|..+++.+.+.+.+..| ++..+....+.++..
T Consensus 359 ~l~~~~~g~~~~-~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~~~l~ 437 (468)
T TIGR00788 359 IIAEVLAQLKFM-PFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGHSLAPLL 437 (468)
T ss_pred HHHHHHHHHHHc-cHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHH
Confidence 222223333333 346788999999999999999999999999999999999999877 665555443333333
Q ss_pred -HHHHHhccc
Q 010212 482 -MLFTFLVPE 490 (515)
Q Consensus 482 -~~~~~~~~~ 490 (515)
..+.+++|+
T Consensus 438 ~l~~~~llP~ 447 (468)
T TIGR00788 438 PLPLLHLLPR 447 (468)
T ss_pred HHHHHHhCCC
Confidence 333335665
No 106
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.89 E-value=1.6e-20 Score=171.19 Aligned_cols=411 Identities=13% Similarity=0.054 Sum_probs=279.0
Q ss_pred ccchhHHHHHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 010212 16 KTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKM 95 (515)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~ 95 (515)
+..++||.++++.++..+.+++.+-.++++.......+ + +....-|..-+|.+.+....+++-|+.|++
T Consensus 38 rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Y----------g-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~ 106 (480)
T KOG2563|consen 38 RVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFY----------G-SSSAADWLSMIYMVVSVPFGFAAMWILDKF 106 (480)
T ss_pred ccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHh----------c-chHHHHHHHHHHHHHHHHHhhHHHHhhccc
Confidence 46678999999999999999999988888888888777 7 777888999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHhhhcCCCCchhHHH--HHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHH
Q 010212 96 GRKRVYGMTLMMMVICSLASGLSFGKEPKAVMI--TLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQG 173 (515)
Q Consensus 96 Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~--~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~ 173 (515)
|-|..++++..+.++|..+-..+....-++.++ ....+..+.+.++-.....-.....-|++++||..+..+-.++..
T Consensus 107 GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~ 186 (480)
T KOG2563|consen 107 GLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNP 186 (480)
T ss_pred chHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcch
Confidence 999999999999999999887775532222245 788999999998887777777888889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHH--HHHHhHHHHHHHHH-HHHhcCCchhhHHHHhccH
Q 010212 174 FGILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRI--ILMFGAIPALLTYY-WRMKMPETARYTALVAKNA 250 (515)
Q Consensus 174 ~G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~--~f~~~~~~~~~~~~-~~~~~~e~p~~~~~~~~~~ 250 (515)
+|.++|.++...+..... ..++..|-. .|+....++.+.++ ..+..++.|+......+..
T Consensus 187 LGvavg~llppilV~~~~-----------------~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~ 249 (480)
T KOG2563|consen 187 LGVAVGFLLPPILVPSSK-----------------DSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAA 249 (480)
T ss_pred HHHHHHhhccceecCCCC-----------------CcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhh
Confidence 999999998888753221 123455665 35543333333323 3344444443210100000
Q ss_pred HHHHHHHHHHHHhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCc
Q 010212 251 KQAAADMSKVLQVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKA 330 (515)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (515)
++ +.+..+-.++-...+ .+...++.+......++.....+...+...|+....
T Consensus 250 ~~------------------------~~~f~~si~~~~~n~---~F~il~~~ygi~~g~F~~l~~~l~~~l~~sgY~~~~ 302 (480)
T KOG2563|consen 250 LQ------------------------DASFPKSIKSCFKNR---QFIILAICYGIGLGLFNSLSTLLNLALCPSGYEGVF 302 (480)
T ss_pred hh------------------------cCcHHHHHHHHHcCc---cHHHHHHHHhhhHHHHHHHHHHhhhccccccCCccc
Confidence 00 111111112222222 234444444444456666665555444445565544
Q ss_pred ccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchh-hHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHH
Q 010212 331 KTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRF-AIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYS 409 (515)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (515)
.+. ..+...++++++..++|.+.||.+.- ....+......++...+.... ......+.+....
T Consensus 303 aG~------------ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t----~~~~~~viv~~t~ 366 (480)
T KOG2563|consen 303 AGY------------IGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCT----LFLGDSVIVFTTC 366 (480)
T ss_pred cch------------hHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhh----ccCCceEehhhhH
Confidence 333 67777788889999999999998753 344444444444422222111 1112333445555
Q ss_pred HHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccC----chHHHHHHHHHHHHHHHHH
Q 010212 410 LTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSG----VKKALLILGGANFLGMLFT 485 (515)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g----~~~~~~~~~~~~~~~~~~~ 485 (515)
...+++..+..|+...+..|..-|..-++..|+.+..+++-+++-..+.+...+..+ +...-+.+...++++..+.
T Consensus 367 ~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lv 446 (480)
T KOG2563|consen 367 GLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILV 446 (480)
T ss_pred HHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHH
Confidence 566677777789998898998767888899999999999999999999999988777 5555555666666666666
Q ss_pred HhccccCCCChh
Q 010212 486 FLVPESKGKSLE 497 (515)
Q Consensus 486 ~~~~~~~~~~~~ 497 (515)
.++++..+|...
T Consensus 447 a~~r~~y~R~~~ 458 (480)
T KOG2563|consen 447 AFFRPDYRRLRA 458 (480)
T ss_pred hhhhhhHHhHhh
Confidence 666655444433
No 107
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.88 E-value=3.9e-20 Score=172.20 Aligned_cols=379 Identities=13% Similarity=0.094 Sum_probs=220.9
Q ss_pred hHHHHHHhhhHHHHHHhh-hhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHH-
Q 010212 31 GFFTDAYDLFCISLVTKL-LGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMM- 108 (515)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~- 108 (515)
.++...+..++.-+..+. +.++. |++.+++|.+.++..+...+.+++.|.++||+|.||-++....+.
T Consensus 15 ~~f~~Ff~~gi~~pF~~iWL~~~~----------GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~ 84 (412)
T PF01306_consen 15 FYFFYFFIWGIFLPFFPIWLTQVA----------GLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILL 84 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcccc----------CCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHH
Confidence 333444445555555544 44457 999999999999999999999999999999999776554333222
Q ss_pred -HHHHHH-hhhc----CCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHH
Q 010212 109 -VICSLA-SGLS----FGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMV 182 (515)
Q Consensus 109 -~i~~~~-~~~~----~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l 182 (515)
..+... ..+. .|. +...+++-+..|+......|+..+++.++.. +.+.-.|-.-+..++|.+++..+
T Consensus 85 ~l~~pff~~v~~pll~~n~-----~lg~iig~i~l~~~f~~~~~~~Ea~~er~sr--~~~feYG~~R~wGSig~ai~s~~ 157 (412)
T PF01306_consen 85 LLFGPFFIYVFGPLLQSNF-----WLGAIIGGIYLGLVFNAGVPLSEAYAERVSR--RNGFEYGRARMWGSIGFAIASLL 157 (412)
T ss_dssp HTCHHHHHHTHHHHHHTT------HHHHHHTTTTTTTTTTTHHHHHHHHHHHHHH--HHSS-HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHcccchHHHHHHHHHHH--HhcCCcchHHHHhhHHHHHHHHH
Confidence 122222 1221 231 3344555555666666666777777766653 23445566667888999999999
Q ss_pred HHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhc-CCchhhHHHHhccHHHHHHHHHHHH
Q 010212 183 AIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKM-PETARYTALVAKNAKQAAADMSKVL 261 (515)
Q Consensus 183 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~-~e~p~~~~~~~~~~~~~~~~~~~~~ 261 (515)
+|.+.+. +-+..|+++...+++..++.+.. |+.++.....+.+.
T Consensus 158 ~G~L~~i------------------------~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~~~----------- 202 (412)
T PF01306_consen 158 AGILFNI------------------------NPNIIFWIASAAAIILLLLLLLLKPDVPPQAEVADALG----------- 202 (412)
T ss_dssp HHHHHHH------------------------HHHHHHHHHHHHHHHHHHHHHSS---SSSSS-SSTTSS-----------
T ss_pred hheeeee------------------------CccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhcccc-----------
Confidence 9988643 24677787666665554444333 33332210000000
Q ss_pred HhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccchhHHHHHH
Q 010212 262 QVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEVYK 341 (515)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (515)
+++++.+.++..+....+ .+|...+........+.......+.++... +... .....
T Consensus 203 -----------~~~~~~~~~~~~~l~k~~----~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~-f~~~------~~g~~- 259 (412)
T PF01306_consen 203 -----------AKKDKVSLKDVLSLFKMR----NFWFFVLFVIGVAAIYDVFDQQFPIYFASF-FQSA------GQGNQ- 259 (412)
T ss_dssp -----------S------HHHHHHHTTSH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-SSSH------HHHHH-
T ss_pred -----------cCCCCCcHHHHHHHhcch----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccc------ccChh-
Confidence 000111111111111112 233333333333334444333344444432 1111 11111
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccc
Q 010212 342 IARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNT 421 (515)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (515)
.-........+..++...+.+++.+|+|.|+.++++..++.+=....++.. +.+.....=.+-..-... ...
T Consensus 260 ~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~-------~~~~i~~~klLH~~e~~l-~lv 331 (412)
T PF01306_consen 260 MYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFAT-------NPWVISLIKLLHALEFPL-LLV 331 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT---------SHHHHHHHHHHHHHHHHH-HHH
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhc-------chHHHHHHHHHHHHHHHH-HHH
Confidence 222256777788888889999999999999999999999988888877654 233322222222222222 223
Q ss_pred cccccccccCchhhhhhhhHHH-HHHhhhhHHHHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHH-hccccC
Q 010212 422 TTFVVPAEIFPARLRSTCHGIS-AASGKAGAIVGAFGFLYLADTSGVKKALLILGGANFLGMLFTF-LVPESK 492 (515)
Q Consensus 422 ~~~~~~~~~~p~~~~~~~~g~~-~~~~~~g~~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~ 492 (515)
..+-++.+.+|++..++...+. +...+++.++.+.+.|.+.|+.|++.++++.+.+.+...++.. .+++.+
T Consensus 332 a~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~ 404 (412)
T PF01306_consen 332 AAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDK 404 (412)
T ss_dssp HHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SS
T ss_pred HHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCCC
Confidence 4457889999999999999886 5777899999999999999999999999999888887777766 444443
No 108
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.87 E-value=2.5e-21 Score=164.53 Aligned_cols=396 Identities=13% Similarity=0.069 Sum_probs=244.2
Q ss_pred hhHHHHHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhh-hhh
Q 010212 19 WYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDK-MGR 97 (515)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr-~Gr 97 (515)
.+|...+...|+..|-.++.....+.+..+...+. +++.++..++.+.|.....+.++++|++.|| +|-
T Consensus 40 ~hr~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~----------ni~~akftLlYsvYSwPNvVlcffgGflidr~fgi 109 (459)
T KOG4686|consen 40 GHRFMALVFMCLLGFGSYFCYDAPGALQIDFKLDS----------NIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGI 109 (459)
T ss_pred hhHHHHHHHHHHhcccceeecCCchhhhhhhhccc----------ccceeeeeeeeeeccCCCEEEeeecceeehhhhhh
Confidence 34566666777777777777777788888887777 8889999999999999999999999999997 788
Q ss_pred hhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHH
Q 010212 98 KRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGIL 177 (515)
Q Consensus 98 r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~ 177 (515)
|..-++-+....++.++++.-.-. +.+|.++.+||+.|+|.-....+...+..-|+..||.+.++|+.....-+|..
T Consensus 110 r~gtii~~~fv~~GqliFa~Ggi~---~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~Gst 186 (459)
T KOG4686|consen 110 RLGTIILCIFVFLGQLIFAAGGIS---HAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGST 186 (459)
T ss_pred hHHHHHHHHHHHHHHHHHHhchHH---HHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhce
Confidence 876555555566777766553211 12899999999999998877788889999999999999999999999999988
Q ss_pred HHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhcCCchhhHHHHhccHHHHHHHH
Q 010212 178 SGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKMPETARYTALVAKNAKQAAADM 257 (515)
Q Consensus 178 ~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~ 257 (515)
+-..+.+++.+..+.-.+. +.+...|-...+ ....+...++...-+ .+ .++ .+.+
T Consensus 187 vNf~lm~~ly~~~~~~~~~-----------~ghT~LG~~l~~--~~~tc~~slical~l----g~---~D~---rAer-- 241 (459)
T KOG4686|consen 187 VNFLLMPFLYDTMGRMFPG-----------VGHTLLGLWLCF--EVKTCKQSLICALSL----GL---SDD---RAER-- 241 (459)
T ss_pred eeeeecHHHHHHHHHhccc-----------chHHHHHHHHHH--HHHHHHHHHHHHHHh----hh---hhh---HHHH--
Confidence 8777777776655431110 000001111111 111111111111000 00 000 0000
Q ss_pred HHHHHhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhH-hcccCCcccchhH
Q 010212 258 SKVLQVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTA-IGWIPKAKTMNAI 336 (515)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 336 (515)
..+.|... ..++.+......++ ..+|.+.....+.....+......|.++++ .|.++...+.
T Consensus 242 --ilh~e~g~----~Ge~pkLtdv~~f~--------ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~--- 304 (459)
T KOG4686|consen 242 --ILHLEEGF----LGEEPKLTDVNTFY--------PPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGN--- 304 (459)
T ss_pred --HHhhhcCc----ccCCcccccccccC--------ccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccc---
Confidence 00000000 00000111111111 123444444445555556566666777765 6777766443
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHH-HHHHHhhhhcccCCCchHHHHHHHHHHHHHh
Q 010212 337 EEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVF-MFALAIPYHHWTLPDHRIGFVVLYSLTFFFS 415 (515)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (515)
+...+..+ ..+..++.|.++||+|++...+.+..+..+. -..+.+.. + +++..+.+..+.....
T Consensus 305 --------i~s~vy~I-sav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft~--l----sPy~~m~~lGLsysll 369 (459)
T KOG4686|consen 305 --------ILSTVYGI-SAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFTF--L----SPYTSMTFLGLSYSLL 369 (459)
T ss_pred --------hhhhhhhh-hhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhhh--c----cHHHHHHHHhhhHHHH
Confidence 23344444 4456678999999999987766654444333 33333322 1 2333343443333333
Q ss_pred hcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccC-ch---HHHHHHHHHHHHHHHHHHhc
Q 010212 416 NFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSG-VK---KALLILGGANFLGMLFTFLV 488 (515)
Q Consensus 416 ~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g-~~---~~~~~~~~~~~~~~~~~~~~ 488 (515)
... .|..++.+.|+++.|++.|.+..+.++|-.+.|.+.|.+.|..| |. ..|+..+.+.+.+..+.+.+
T Consensus 370 Acs----lWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~~~ 442 (459)
T KOG4686|consen 370 ACS----LWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILFYL 442 (459)
T ss_pred HHH----HhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHhhe
Confidence 332 44556778899999999999999999999999999999999766 33 33455555555555555544
No 109
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.86 E-value=3.8e-19 Score=173.96 Aligned_cols=349 Identities=15% Similarity=0.073 Sum_probs=235.8
Q ss_pred HHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhh----hhhhhhH-HHHHHHHHHHHHHHhhhc
Q 010212 44 LVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGD----KMGRKRV-YGMTLMMMVICSLASGLS 118 (515)
Q Consensus 44 ~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~d----r~Grr~~-l~~~~~~~~i~~~~~~~~ 118 (515)
...+...+.. ++++...|.+..+..+-.++..|+.|.++| |+||||. ++.+..+.+++.+++...
T Consensus 23 ~~~~f~~~~~----------gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~ 92 (428)
T PF13347_consen 23 YLLYFYTDVL----------GLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSP 92 (428)
T ss_pred HHHHHHHHHc----------CCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhcc
Confidence 4456666777 999999999999999999999999999999 8998776 567888888888777766
Q ss_pred -C-CCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccc-cccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 010212 119 -F-GKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYAN-KKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFP 195 (515)
Q Consensus 119 -~-~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~-~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~ 195 (515)
+ +.+.......+.+..++..++.........++..|..+ +++|.+..+.-..+..+|.++...+.+.+...++.
T Consensus 93 ~p~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~--- 169 (428)
T PF13347_consen 93 PPAGLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGG--- 169 (428)
T ss_pred ccchhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhcc---
Confidence 4 21111113446777777899999999999999999997 57899999999999999998788887777665553
Q ss_pred CCccCCCCCCccccCCC-chHHHHHHHhHHHHHHHHH-HHHhcCCchhhHHHHhccHHHHHHHHHHHHHhhhhHhhhhHH
Q 010212 196 APIYSANPAASTVPEAD-YIWRIILMFGAIPALLTYY-WRMKMPETARYTALVAKNAKQAAADMSKVLQVELEAEQEKVE 273 (515)
Q Consensus 196 ~~~~~~~~~~~~~~~~~-~~wr~~f~~~~~~~~~~~~-~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (515)
.+. .+|++..++.+++.++..+ ..+..+|.++. . .+
T Consensus 170 --------------~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~-----~-----------------------~~ 207 (428)
T PF13347_consen 170 --------------GDTSNGYRWMALVLAIVGLVFFLITFFFVKERSVE-----V-----------------------TE 207 (428)
T ss_pred --------------CccchHHHHHHHHHHHHHHHHhhhhhheeeecccc-----c-----------------------cc
Confidence 122 3799999987777666544 44556772111 0 00
Q ss_pred HhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccchhHHHHHHHHHHHHHHHHhh
Q 010212 274 QEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKIARAQTLIALCS 353 (515)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (515)
++++.+.++.++....++..+.++...+. ............+++.+..--.+.. .........+.
T Consensus 208 ~~~~~~~~~~~~~~~~nr~~~~l~~~~~~---~~~~~~~~~~~~~y~~~~vl~~~~~------------~~~~~~~~~~~ 272 (428)
T PF13347_consen 208 QEKKISLRDSLRSLFRNRPFRILLLAFFL---QWLAFALMNTFLPYYFTYVLGNEGL------------ISIFMLIFFVA 272 (428)
T ss_pred cccccccccchhhhcccchHHHHHHHHHH---HHhhhhhhhhHHHHHHHHHhcCchh------------hHHHHHHHHHH
Confidence 11222333333333333322222222222 2222222333333444331111111 11244566677
Q ss_pred hhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCch
Q 010212 354 TVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPA 433 (515)
Q Consensus 354 ~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 433 (515)
.+++.++.++++||+|+|+.+..+..+.+++.+.+.+... .+.....+..+..+..........+++.+|..+.
T Consensus 273 ~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~ 346 (428)
T PF13347_consen 273 SIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGP------GSPWLVLILFILAGIGYGAFFVIPWAMLADVIDY 346 (428)
T ss_pred HHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHh------hhHHHHHHHHHHhHhhhcccccccccccccchhh
Confidence 7888889999999999999999999998888887766541 2334444444444444455567788888888763
Q ss_pred -------hhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCch
Q 010212 434 -------RLRSTCHGISAASGKAGAIVGAFGFLYLADTSGVK 468 (515)
Q Consensus 434 -------~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~ 468 (515)
+..|..+|+.+....++..+++.+.+.+.+..||.
T Consensus 347 ~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~Gy~ 388 (428)
T PF13347_consen 347 DEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVGYD 388 (428)
T ss_pred HHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhCcC
Confidence 44688999999999999999999999998866543
No 110
>PRK11462 putative transporter; Provisional
Probab=99.85 E-value=4.7e-18 Score=166.79 Aligned_cols=336 Identities=11% Similarity=0.009 Sum_probs=200.7
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHhhhhhh----hhhhhH-HHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhh
Q 010212 64 TLPDNVASAVNGVALCGTLAGQLFFGWLGDK----MGRKRV-YGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLG 138 (515)
Q Consensus 64 ~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr----~Grr~~-l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G 138 (515)
+++...+|.+..+.-+--++..|+.|.++|| +||||. ++++.+..+++.+++...++.+....+..+++.-++..
T Consensus 41 Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~~ 120 (460)
T PRK11462 41 GIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLLT 120 (460)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHH
Confidence 9999999999999999999999999999996 798765 55677788887776655554222222345666777778
Q ss_pred hccccccchhhHhhhhccc-cccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHH
Q 010212 139 FGIGGDYPLSATIMSEYAN-KKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRI 217 (515)
Q Consensus 139 ~~~g~~~~~~~~~i~e~~~-~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~ 217 (515)
++.......-.++..|..+ ++||++..++...+..+|..+++.+...+....+.. ....+|+.
T Consensus 121 ~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~----------------~~~~g~~~ 184 (460)
T PRK11462 121 LLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGD----------------NKPLGFQG 184 (460)
T ss_pred HHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----------------chhhhHHH
Confidence 8888888888899999997 788999999999999999988888877665554420 12357888
Q ss_pred HHHHhHHHHHHHHHHH-HhcCCchhhHHHHhccHHHHHHHHHHHHHhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHH
Q 010212 218 ILMFGAIPALLTYYWR-MKMPETARYTALVAKNAKQAAADMSKVLQVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHL 296 (515)
Q Consensus 218 ~f~~~~~~~~~~~~~~-~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (515)
...+.++++++..... ...+|.++. ++ ++.+.++.++....++.++.+
T Consensus 185 ~~~i~~ii~~i~~~i~~~~~kE~~~~-----~~--------------------------~~~~~~~~l~~~~~Nk~~~~l 233 (460)
T PRK11462 185 GIAVLSVVAFMMLAFCFFTTKERVEA-----PP--------------------------TTTSMREDLRDIWQNDQWRIV 233 (460)
T ss_pred HHHHHHHHHHHHHHHHHhcceeccCC-----Cc--------------------------cCCCHHHHHHHHhCChHHHHH
Confidence 7777666655544333 334553221 00 001112222222222222222
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHH
Q 010212 297 IGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLM 376 (515)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~ 376 (515)
....+..............|...+. .+ .+ . ..........+..+++.++++++.||+++|+....
T Consensus 234 ~~~~~~~~~~~~~~~~~~~y~~~y~--~g-~~------~------~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~ 298 (460)
T PRK11462 234 GLLTIFNILAVCVRGGAMMYYVTWI--LG-TP------E------VFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWW 298 (460)
T ss_pred HHHHHHHHHHHHHHHhHhhhhhhhh--cC-Ch------H------HHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHH
Confidence 2222222222122222222222221 11 10 0 01123445566777888899999999999988765
Q ss_pred HHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCc-------hhhhhhhhHHHHHHhhh
Q 010212 377 GFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFP-------ARLRSTCHGISAASGKA 449 (515)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~g~~~~~~~~ 449 (515)
+..+..+..+++.+.. ........+...+ .+.......+..+++..|..+ .+..|...+.......+
T Consensus 299 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l-~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Kl 372 (460)
T PRK11462 299 TNALLAVISLAMFFVP-----MQASITMFVFIFV-IGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKL 372 (460)
T ss_pred HHHHHHHHHHHHHHhc-----hhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHH
Confidence 5444333333222211 1111122222222 222222234445666666654 33345556777789999
Q ss_pred hHHHHHHHHHHhhhccCc
Q 010212 450 GAIVGAFGFLYLADTSGV 467 (515)
Q Consensus 450 g~~i~~~~~~~l~~~~g~ 467 (515)
|..+++.+.|.+.+..||
T Consensus 373 g~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 373 GLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHHHHHHHHHHHHHcCC
Confidence 999999999999876555
No 111
>PRK09848 glucuronide transporter; Provisional
Probab=99.85 E-value=3.4e-18 Score=168.44 Aligned_cols=340 Identities=11% Similarity=0.013 Sum_probs=188.9
Q ss_pred HHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhh----hhhhHH-HHHHHHHHHHHHHhhhcC
Q 010212 45 VTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKM----GRKRVY-GMTLMMMVICSLASGLSF 119 (515)
Q Consensus 45 ~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~----Grr~~l-~~~~~~~~i~~~~~~~~~ 119 (515)
+.+.+.+.+ |++..++|.+.+...+..++..++.|+++||. ||||.. ..+.+...+..++....+
T Consensus 31 l~~y~~~~~----------gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~ 100 (448)
T PRK09848 31 LLSYYTDVA----------GVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVP 100 (448)
T ss_pred HHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCc
Confidence 445666667 89999999999999999999999999999996 777754 556555554444432222
Q ss_pred -CCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccc-cccchhHHHHHHHHHHH-----HHHHHHHHHHHHHHhhhc
Q 010212 120 -GKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYAN-KKTRGAFIAAVFAMQGF-----GILSGGMVAIIVSAAFKA 192 (515)
Q Consensus 120 -~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~-~~~r~~~~~~~~~~~~~-----G~~~g~~l~~~l~~~~~~ 192 (515)
..........+++..++.+++.+...+...++..|..+ +++|.+..+.-..+.++ +..++|.++... +.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~----g~ 176 (448)
T PRK09848 101 TDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSS----PE 176 (448)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----CC
Confidence 11011113344555667788888888777788777764 46788877666544343 344444443321 10
Q ss_pred CCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHH-HHHHHhcCCchhhHHHHhccHHHHHHHHHHHHHhhhhHhhhh
Q 010212 193 NFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLT-YYWRMKMPETARYTALVAKNAKQAAADMSKVLQVELEAEQEK 271 (515)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~-~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (515)
....+|.....+.++.+++. ++.....||+++. +.
T Consensus 177 -----------------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~e~~~~-----~~---------------------- 212 (448)
T PRK09848 177 -----------------EMVSVYHFWTIVLAIAGMVLYFICFKSTRENVVR-----IV---------------------- 212 (448)
T ss_pred -----------------chhhhHHHHHHHHHHHHHHHHHHHHcCcEeccCC-----Cc----------------------
Confidence 00111222222222232222 2223334554321 00
Q ss_pred HHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhH-hcccCCcccchhHHHHHHHHHHHHHHH
Q 010212 272 VEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTA-IGWIPKAKTMNAIEEVYKIARAQTLIA 350 (515)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (515)
++.+.++.++....++ .+....+..++....+.......+.++++ .+.++ ..+.......
T Consensus 213 ----~~~~~~~~~~~l~~n~---~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~------------~~~~~~~~~~ 273 (448)
T PRK09848 213 ----AQPSLKISLQTLKRNR---PLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTG------------LFTVLVLVQN 273 (448)
T ss_pred ----cCCCHHHHHHHHhCCc---hHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChH------------HHHHHHHHHH
Confidence 0001111111111111 12222222222223333333334444333 12111 1122233344
Q ss_pred HhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCcccccccccccc
Q 010212 351 LCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEI 430 (515)
Q Consensus 351 ~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (515)
.++.+++.++.+++.||+|+|+.+..+..+..++.+.+.+.. ....+......+..+.+.....+..+++..|.
T Consensus 274 ~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~------~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~ 347 (448)
T PRK09848 274 LVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVS------VWSLPVALVALAIASIGQGVTMTVMWALEADT 347 (448)
T ss_pred HHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcC------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 556677888999999999999999988887777766554321 11222222222333333333455666777777
Q ss_pred Cchh-------hhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCc
Q 010212 431 FPAR-------LRSTCHGISAASGKAGAIVGAFGFLYLADTSGV 467 (515)
Q Consensus 431 ~p~~-------~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~ 467 (515)
.|.+ .+|..+|+.+....+|..+++.+.+.+.+..||
T Consensus 348 ~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 348 VEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred hhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 7643 459999999999999999999999998876665
No 112
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.84 E-value=5.9e-18 Score=159.22 Aligned_cols=341 Identities=14% Similarity=0.077 Sum_probs=234.3
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHhhhhhh----hhhhhH-HHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhh
Q 010212 64 TLPDNVASAVNGVALCGTLAGQLFFGWLGDK----MGRKRV-YGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLG 138 (515)
Q Consensus 64 ~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr----~Grr~~-l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G 138 (515)
|++....|.+..+.-+--++.-|+.|.++|| +||||. ++.+.+..++.+.++-.+++.+........++..++.+
T Consensus 44 Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~ 123 (467)
T COG2211 44 GLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTYMLLG 123 (467)
T ss_pred CCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHHHHHH
Confidence 8999999999999999999999999999995 888655 77788999999999888886443344677888889999
Q ss_pred hccccccchhhHhhhhccc-cccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHH
Q 010212 139 FGIGGDYPLSATIMSEYAN-KKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRI 217 (515)
Q Consensus 139 ~~~g~~~~~~~~~i~e~~~-~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~ 217 (515)
++.......-.++..|+.+ ++||.+..+.-+.+.++|..+...+...+....+.+ +...||+.
T Consensus 124 l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~----------------~~~~g~~~ 187 (467)
T COG2211 124 LGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGG----------------DKALGYQG 187 (467)
T ss_pred HHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----------------cchhhHHH
Confidence 9999999999999999985 788999999999999999999888888887777641 23678999
Q ss_pred HHHHhHHHHHHHHHHH-HhcCCchhhHHHHhccHHHHHHHHHHHHHhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHH
Q 010212 218 ILMFGAIPALLTYYWR-MKMPETARYTALVAKNAKQAAADMSKVLQVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHL 296 (515)
Q Consensus 218 ~f~~~~~~~~~~~~~~-~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (515)
.-++.++.+++..+.+ +..+|.+... . .. +++.+.+.++.+.....++.++..
T Consensus 188 ~~~~~~vi~~i~~l~~~~~v~ER~~~~--~-~~-----------------------~~~~~~~~~~~~~~~~~Nrp~~~~ 241 (467)
T COG2211 188 TALVLGVIGVILLLFCFFNVKERVVET--Q-PT-----------------------KTGVKLKLKDSFLLIFKNRPLLLL 241 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcccCcc--c-cC-----------------------cccccccHHHHHHHHHccchHHHH
Confidence 8888777777665544 4466654310 0 00 001112222222222223322222
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhHHHhH-hcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHH
Q 010212 297 IGTTVTWFLLDVAYYSQNLFQKDIFTA-IGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQL 375 (515)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~ 375 (515)
+. ...+.............++.+. +|... ............+.+++.++..++.+|+|+|++..
T Consensus 242 l~---~~l~~~~~~~i~~s~~~yy~~y~lg~~~------------l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~ 306 (467)
T COG2211 242 LL---MNLLLFIAFNIRGSIMVYYVTYVLGDPE------------LFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFL 306 (467)
T ss_pred HH---HHHHHHHHHHHHhhhhheeEEEEcCChH------------HHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHH
Confidence 22 2222222222222222222211 11111 11222455555666667889999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCc-------hhhhhhhhHHHHHHhh
Q 010212 376 MGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFP-------ARLRSTCHGISAASGK 448 (515)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~g~~~~~~~ 448 (515)
++.++..++.+++.+.. .+....+++..+..+.......+..|++.+|..+ .+..|...|...++.-
T Consensus 307 ~~~~~~~i~~~~~~f~~------~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K 380 (467)
T COG2211 307 IGLLLLAVGYLLLYFTP------AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRK 380 (467)
T ss_pred HHHHHHHHHHHHHHhhc------CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHH
Confidence 99888888887776544 2334444455445445555567888999988864 3556888999999999
Q ss_pred hhHHHHHHHHHHhhhccCc
Q 010212 449 AGAIVGAFGFLYLADTSGV 467 (515)
Q Consensus 449 ~g~~i~~~~~~~l~~~~g~ 467 (515)
+|.+++..+.|++++..||
T Consensus 381 ~g~ala~~~~g~~L~~~Gy 399 (467)
T COG2211 381 LGLALAGFIPGWILGAIGY 399 (467)
T ss_pred HHHHHHHHHHHHHHHHcCC
Confidence 9999999999999886664
No 113
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.81 E-value=4.2e-19 Score=167.15 Aligned_cols=417 Identities=16% Similarity=0.150 Sum_probs=248.3
Q ss_pred ccchhHHHHHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 010212 16 KTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKM 95 (515)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~ 95 (515)
..++.+|+.+.+..+..++.....+++.+..-+..+++ |.+.+.+..|++.++..++.+++++..|+...|.
T Consensus 27 ~~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~l--------D~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~ 98 (488)
T KOG2325|consen 27 DERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKL--------DPTATATFFGLVIAASSLGHAIFSLIFGIWSNKT 98 (488)
T ss_pred cccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhc--------CCCCCcchhhHHHHHHHHHHHhcchhhccccccc
Confidence 34456788888888888888888777666554444443 1277888999999999999999999999999999
Q ss_pred hh-hhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHH
Q 010212 96 GR-KRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGF 174 (515)
Q Consensus 96 Gr-r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~ 174 (515)
+. |+.++.|.++..+++++....... +.+.-+.++++|++.|+|.+. .....+|+++....++|.++++....+..+
T Consensus 99 ~~~k~Pli~s~ii~~~g~llY~~l~~~-~~~~~y~mL~~R~l~Gvg~~n-~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vl 176 (488)
T KOG2325|consen 99 GSVKKPLIVSFLIAIIGNLLYLALAYV-PNGVKYLMLVARILTGVGVGN-FAVLRAYIADASTVEDRPRAFAATSGGFVL 176 (488)
T ss_pred CCcccCHHHHHHHHHHHHHHHHHHHhc-ccchHHHHHHHHHHcCcCccc-HHHHHHHHHhccCccchHHHHHHhhhHHHH
Confidence 97 888999999999999988332211 111368999999999999775 688999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCc-cCCCCCCccccCCCchHHHHHHHhHHHHHHHHH-HHHhcCCchhhHHHHhccHHH
Q 010212 175 GILSGGMVAIIVSAAFKANFPAPI-YSANPAASTVPEADYIWRIILMFGAIPALLTYY-WRMKMPETARYTALVAKNAKQ 252 (515)
Q Consensus 175 G~~~g~~l~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~-~~~~~~e~p~~~~~~~~~~~~ 252 (515)
|.++||.++..+......+....+ ...| -+..+-|+.++..++.++ +.++++|.++.. .+++.++
T Consensus 177 g~ilGp~~q~~f~~Lg~~G~~i~~~~~~n-----------~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~--~~~~~~~ 243 (488)
T KOG2325|consen 177 GIILGPTIQLAFTPLGEKGFMILPGLIFN-----------MYTAPAWLMAILWIIYIVIILFFFKEVYRGI--IDKKKRS 243 (488)
T ss_pred HHHHhHHHHHHHhhhcCCceEEcCcceEE-----------ecchHHHHHHHHHHHHHHHHHhheeecccCc--ccccccc
Confidence 999999999888654332211111 1111 134455666666666443 446677776541 1111000
Q ss_pred HHHHHHHHHHhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHH-HhhhhhHHHhHhcccCCcc
Q 010212 253 AAADMSKVLQVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYS-QNLFQKDIFTAIGWIPKAK 331 (515)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 331 (515)
. ++++.+.+ ..+.+ +..+...+.+.+..+...+.+.. .....+......+|..++.
T Consensus 244 ~------------~~~~~~~~---------~~~~~--~~d~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~a 300 (488)
T KOG2325|consen 244 V------------EEEKSDIE---------KVKKP--KLDWVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEA 300 (488)
T ss_pred c------------hhhccchh---------hhccC--ChhHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchH
Confidence 0 00000000 00111 11112334444444444444444 4444455555567765542
Q ss_pred cchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHH-HhhchhhHHHHHHHHHHHHHHHHHhhhhcccCC------------
Q 010212 332 TMNAIEEVYKIARAQTLIALCSTVPGYWFTVALI-DKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLP------------ 398 (515)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~-d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 398 (515)
-. ..+..... .++..+.-.+...+.. .++.+|+.+..+.++...+..+..........+
T Consensus 301 v~-------~~gi~~~~-~g~ls~~~~l~~~f~~l~~i~~r~~~~~g~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~ 372 (488)
T KOG2325|consen 301 VL-------YNGITLSI-SGILSVILLLLYIFTRLGKIDKRRIILLGFLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCD 372 (488)
T ss_pred HH-------hhhhHHHH-HHHHHHHHHHHHHHHHhhhhccceeeeehHHHHHHhhheeeeeccccccccccccccccCcC
Confidence 21 12222222 2222222211222222 233345555555444444433332221111000
Q ss_pred C------------chHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccC
Q 010212 399 D------------HRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSG 466 (515)
Q Consensus 399 ~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g 466 (515)
. +.+.......+..+...-.......+.-+|...++.++++.+++......+..++|.+........|
T Consensus 373 ~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g 452 (488)
T KOG2325|consen 373 FEEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSG 452 (488)
T ss_pred cccchhhccCcccChhhheeehhheeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhcC
Confidence 0 0001111111111111111122344566888889999999999999999999999999999998899
Q ss_pred chHHHHHHHHHHHHHHHHHH
Q 010212 467 VKKALLILGGANFLGMLFTF 486 (515)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~ 486 (515)
++..+.+..+..++...++.
T Consensus 453 ~~~v~~~~~~~~l~~~~l~~ 472 (488)
T KOG2325|consen 453 PRPVWIILLCLLLVVAALWI 472 (488)
T ss_pred ccHHHHHHHHHHHHHHHHHH
Confidence 99888877766666655554
No 114
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.81 E-value=1.3e-17 Score=154.50 Aligned_cols=287 Identities=14% Similarity=0.061 Sum_probs=181.9
Q ss_pred HHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccCCCCCCc
Q 010212 127 MITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFPAPIYSANPAAS 206 (515)
Q Consensus 127 ~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~ 206 (515)
++.++++-++.|.|.+...+..+.++++..|++++.+.+++.+...++|..++|.+++.+......+. +. .+.
T Consensus 10 ~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~-----~~--~~~ 82 (310)
T TIGR01272 10 YVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDL-----SM--QVA 82 (310)
T ss_pred HHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcch-----hh--hhh
Confidence 89999999999999999999999999999999999999999999999999999999998874321000 00 000
Q ss_pred cccCCCchHHHHHHHhHHHHHHHHHHHHh--cCCchhhHHHHhccHHHHHHHHHHHHHhhhhHhhhhHHHhhcCCcchhh
Q 010212 207 TVPEADYIWRIILMFGAIPALLTYYWRMK--MPETARYTALVAKNAKQAAADMSKVLQVELEAEQEKVEQEKGKNDFGLF 284 (515)
Q Consensus 207 ~~~~~~~~wr~~f~~~~~~~~~~~~~~~~--~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (515)
....+...|+++|++.+...++..+.+.+ +||.++. +.++. .+++..+.++.+
T Consensus 83 ~~~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~~------~~~~~-------------------~~~~~~~~~~~~ 137 (310)
T TIGR01272 83 TANAEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQEA------DVARV-------------------SSGDTTQKTSAF 137 (310)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcc------ccccc-------------------ccccccchhhHH
Confidence 00011246999999654444433333333 3443211 00000 000000001111
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhHh---cccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHH
Q 010212 285 SAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTAI---GWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFT 361 (515)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (515)
+ ++ .++...+..++..........|.+.|+.+. ++++.. +.........+.++|++++
T Consensus 138 ~----~~---~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~------------a~~~~s~~~~~~~iGr~~~ 198 (310)
T TIGR01272 138 Q----FT---HLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQ------------AAHFTAYTWGGAMVGRFIG 198 (310)
T ss_pred h----hH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHH------------HHHHHHHHHHHHHHHHHHH
Confidence 1 11 222333444444445666677778887642 444333 2236677778889999999
Q ss_pred HHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhH
Q 010212 362 VALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHG 441 (515)
Q Consensus 362 g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g 441 (515)
+++.||+++|+.+..+..+..++.++..... .... .... ...+++.....|...+...+..|+ ..+++.+
T Consensus 199 ~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~-------~~~~-~~~~-~l~g~~~s~i~P~~~s~a~~~~~~-~~~~asa 268 (310)
T TIGR01272 199 SAVMPMISQGRYLAFNAFLAVLLSIGAALTH-------GYVA-MWFV-LALGLFNSIMFPTIFSLALNALGR-HTSQGSG 268 (310)
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHHHcC-------CHHH-HHHH-HHHHHHHHHHHHHHHHHHHhhhhh-hhhhhHH
Confidence 9999999999988877776666654433221 1111 1222 233344444567777788888774 4566777
Q ss_pred HHHHHhhhhHHHHHHHHHHhhhccCchHHHHHHH
Q 010212 442 ISAASGKAGAIVGAFGFLYLADTSGVKKALLILG 475 (515)
Q Consensus 442 ~~~~~~~~g~~i~~~~~~~l~~~~g~~~~~~~~~ 475 (515)
+. ..+.+|+++.|.+.|.+.|..|.+.++++..
T Consensus 269 i~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~ 301 (310)
T TIGR01272 269 IL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPV 301 (310)
T ss_pred HH-HHHHhcchHHHHHHHHHHHhccchHHHHHHH
Confidence 75 5678999999999999999989888876443
No 115
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.80 E-value=6.3e-18 Score=153.76 Aligned_cols=372 Identities=12% Similarity=0.111 Sum_probs=238.7
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhH-HHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhcccc
Q 010212 65 LPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRV-YGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGG 143 (515)
Q Consensus 65 ~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~-l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 143 (515)
-+.+..+...++..+..++.+|+.|.++|+.|+||. +-+...+..++.++..++++. ..++..++.-.+..++...
T Consensus 55 ~~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~---s~~~~~l~~~il~~i~~~~ 131 (438)
T COG2270 55 SSTAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPG---SYLLLLLLFLILASIGFEF 131 (438)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCC---chHHHHHHHHHHHHHhcch
Confidence 345678899999999999999999999999997655 666677777777777777762 1167778888888999998
Q ss_pred ccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cCCCCCccCCCCCCccccCCCchHHHHHHHh
Q 010212 144 DYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFK-ANFPAPIYSANPAASTVPEADYIWRIILMFG 222 (515)
Q Consensus 144 ~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~ 222 (515)
....-.+++.+..++++-++..++-.....+|..+.-+..-......+ ...+..-..+ .+.+...=|..+.+.
T Consensus 132 s~Vfyds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l------~~~~~~~~ri~~~l~ 205 (438)
T COG2270 132 SNVFYDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGL------PPADGEDVRITGLLA 205 (438)
T ss_pred hheehhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeecc------CccccccchhHHHHH
Confidence 889999999999999988888887777677777665555322211110 0000000111 123445678888886
Q ss_pred HHHHHH-HHHHHHhcCCchhhHHHHhccHHHHHHHHHHHHHhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHH
Q 010212 223 AIPALL-TYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTV 301 (515)
Q Consensus 223 ~~~~~~-~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (515)
++-.++ .+.+++..+|.++.. .+..+.-.+.. ++.++.+|+...++....++..
T Consensus 206 A~W~li~~iPm~~~v~~~~~~~---~~~~~~l~~g~--------------------k~L~~t~k~i~~~~~i~~FLiA-- 260 (438)
T COG2270 206 ALWWLLFALPMILNVHDAEKIS---SPPPTALRNGF--------------------KELKSTFKEIRGRKNLVLFLIA-- 260 (438)
T ss_pred HHHHHHHHhHHHhccccccccc---ccchHHHHHHH--------------------HHHHHHHHHHhcccchHHHHHH--
Confidence 665554 555667777765320 00000000000 1111222222223322222222
Q ss_pred HHHHHHHHHHHHhhhhhHHHh-HhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHH
Q 010212 302 TWFLLDVAYYSQNLFQKDIFT-AIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFF 380 (515)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 380 (515)
.+...=.......+...+-. .+|++..+... ......+..++|+++.|++.||+|.|+++..+.++
T Consensus 261 -~~~~~DGv~til~~~~~fg~~~~gls~~~lll------------~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi 327 (438)
T COG2270 261 -RFFYIDGVNTILAMGGVFGAADLGLSSTELLL------------IGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVI 327 (438)
T ss_pred -HHHHHhhHHHHHHHHHHHHHHHcCccHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHH
Confidence 22221122223333333333 46776655333 56666777888999999999999999998888877
Q ss_pred HHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHH
Q 010212 381 MTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLY 460 (515)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~ 460 (515)
..+..+...... ... -.....+..+.+..+.++..-++..++.|+++.++..|+++..+...++++|.+.+.
T Consensus 328 ~~~~~~~~~~~~-------~~~-~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v 399 (438)
T COG2270 328 LSIAALYLIFLE-------GEL-DFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAV 399 (438)
T ss_pred HHHHHHHHHHcc-------ccH-HHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHH
Confidence 776666554433 112 222333444444455577788899999999999999999999999999999999999
Q ss_pred hhhccC-chHHHHHHHHHHHHHHHHHHhcccc
Q 010212 461 LADTSG-VKKALLILGGANFLGMLFTFLVPES 491 (515)
Q Consensus 461 l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (515)
+.+..| .+..+....++.+++.+..+..|+.
T Consensus 400 ~t~iTg~~r~g~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 400 ITQITGSSRAGVLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred HHHHhcchhhHHHHHHHHHHhhHhhEEeecCC
Confidence 988665 4566666666666776666566654
No 116
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.79 E-value=1.8e-16 Score=147.79 Aligned_cols=415 Identities=12% Similarity=0.075 Sum_probs=247.0
Q ss_pred HHHHHhHHHHHHhhhHH-HHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhhHHHH
Q 010212 26 VIAGMGFFTDAYDLFCI-SLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDK-MGRKRVYGM 103 (515)
Q Consensus 26 ~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr-~Grr~~l~~ 103 (515)
..++..-+-.-++.+-. +++.-++..++ .+. .+.++++..-+.+.|..-.-+..+++|+++|| +|+|+++.+
T Consensus 24 ~~if~vE~WERFsyYGmraiL~~Yl~~~~----~~g--Lg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~l 97 (498)
T COG3104 24 YLIFFVELWERFSYYGMRAILILYLYYQL----GDG--LGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVL 97 (498)
T ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHhc----ccc--CCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHH
Confidence 34444444444443333 33344455555 111 35899999888888888888999999999999 699999999
Q ss_pred HHHHHHHHHHHhhhcC--CCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccc--cchhHHHHHHHHHHHHHHHH
Q 010212 104 TLMMMVICSLASGLSF--GKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKK--TRGAFIAAVFAMQGFGILSG 179 (515)
Q Consensus 104 ~~~~~~i~~~~~~~~~--~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~--~r~~~~~~~~~~~~~G~~~g 179 (515)
|.++..+|.++.+... + ...++++-.+.++|.|..-+....++.|.+|++ +|-..+++++++.++|..++
T Consensus 98 Gail~~iGh~~L~~~~~~~------~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~ 171 (498)
T COG3104 98 GAILMAIGHLVLAISSVSG------PGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIA 171 (498)
T ss_pred HHHHHHHHHHHHhcccccc------ccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHH
Confidence 9999999999999884 4 578899999999999999999999999999864 36778899999999999999
Q ss_pred HHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhcCC----chhhHHHHhccHHHHHH
Q 010212 180 GMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKMPE----TARYTALVAKNAKQAAA 255 (515)
Q Consensus 180 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e----~p~~~~~~~~~~~~~~~ 255 (515)
|++.+++. +..||...|.++++-....++.....+. ++...+....+..+...
T Consensus 172 p~i~~~~~-----------------------~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~ 228 (498)
T COG3104 172 PIITGLLA-----------------------INYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLP 228 (498)
T ss_pred HHHHHHHH-----------------------HhhCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhhh
Confidence 99999996 4566999999988877776665544332 11000000111111111
Q ss_pred HHHHH----HHhh-----hhHhhhhH--------HH---hhcCCcchhhh-hhhhhhhhHHHHHHHHHHHHHHHHHHHHh
Q 010212 256 DMSKV----LQVE-----LEAEQEKV--------EQ---EKGKNDFGLFS-AKFVRRHGLHLIGTTVTWFLLDVAYYSQN 314 (515)
Q Consensus 256 ~~~~~----~~~~-----~~~~~~~~--------~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (515)
..... .... ..+..... +. .+.....+... +++.....+.++...+.|.+..-......
T Consensus 229 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~er~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~ 308 (498)
T COG3104 229 VLGGLVVMILAALLTLLLNQNTFSGVLLVISILIAIIYFAEAFRSPKVFDERRRLLAAIPLFLFAVIFWALYEQMGSSLN 308 (498)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHHHHhccchHH
Confidence 11000 0000 00000000 00 00001111010 11111111122222233333222222233
Q ss_pred hhhhHHHhHhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchh-------hHHHHHHHHHHHHHHH
Q 010212 315 LFQKDIFTAIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRF-------AIQLMGFFFMTVFMFA 387 (515)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~-------~~~~~~~~~~~~~~~~ 387 (515)
.+.....+. ++ .+.+. . ....-....+..++..++..++..|.+++ .-.-.+..+++.++++
T Consensus 309 ~~a~~~v~~-~~----~g~~v-p-----~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~ 377 (498)
T COG3104 309 LYADRNVNR-QI----FGFEV-P-----PAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLI 377 (498)
T ss_pred HHHHHhhcc-cc----cceec-C-----HHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHH
Confidence 333222221 10 10000 0 00133334444445555666666664332 2234666666666666
Q ss_pred HHhhhhccc--CCCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHH-----
Q 010212 388 LAIPYHHWT--LPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLY----- 460 (515)
Q Consensus 388 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~----- 460 (515)
+........ ....+.++.+...++..++.....|+..+++....|+...+..++........++.++..+.+.
T Consensus 378 l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~ 457 (498)
T COG3104 378 LLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTD 457 (498)
T ss_pred HHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccc
Confidence 665522222 3335667777777888889999999999999999999999999999888888888887777663
Q ss_pred -hhhccCchHHHHHHHHHHHHHHHHHH
Q 010212 461 -LADTSGVKKALLILGGANFLGMLFTF 486 (515)
Q Consensus 461 -l~~~~g~~~~~~~~~~~~~~~~~~~~ 486 (515)
..+.......|..++...++..+..+
T Consensus 458 ~~~~~~~~~~~F~~~g~v~i~~~~~~~ 484 (498)
T COG3104 458 PAYTAFIEGRVFGTIGVVAIVIGILLL 484 (498)
T ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHHH
Confidence 22334455667777666666555544
No 117
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.76 E-value=4.3e-16 Score=153.02 Aligned_cols=404 Identities=13% Similarity=0.159 Sum_probs=267.2
Q ss_pred HHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHH
Q 010212 24 AIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGM 103 (515)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~ 103 (515)
.+.++++..+.+++....+...+..+.+.| +++.++.|++.+.+-++..+...+..+..-|..|-+.+-+
T Consensus 98 fl~~l~~~~~~q~l~~~y~~s~IttiErRF----------~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~ 167 (735)
T KOG3626|consen 98 FLVLLSLAAFAQGLYVGYFNSVITTIERRF----------KISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGI 167 (735)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhhhc----------CCCCCcceeEeeecccchhhhhHhHHHhccccCccceeee
Confidence 455666777778877788888999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcC------------------CC---------------------------C-chhHHHHHHHHHHHh
Q 010212 104 TLMMMVICSLASGLSF------------------GK---------------------------E-PKAVMITLCFFRFWL 137 (515)
Q Consensus 104 ~~~~~~i~~~~~~~~~------------------~~---------------------------~-~~~~~~~l~~~r~l~ 137 (515)
|+++++++++++++-+ +. . ....+..++++.++.
T Consensus 168 G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~ 247 (735)
T KOG3626|consen 168 GLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLL 247 (735)
T ss_pred chhHHHHHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHh
Confidence 9999999999987630 00 0 001245789999999
Q ss_pred hhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCc--hH
Q 010212 138 GFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADY--IW 215 (515)
Q Consensus 138 G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~w 215 (515)
|+|....++...+|+-|...+++-+..+|+......+|.++|.++++++.....+.. ..+...+| .+.+| .|
T Consensus 248 GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~-~~~~~it~-----~DPrWIGAW 321 (735)
T KOG3626|consen 248 GIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFG-LSPIGITP-----TDPRWIGAW 321 (735)
T ss_pred hcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccc-cCCCCCCC-----CCcchhhHH
Confidence 999999999999999999999999999999999999999999999999987655321 12222222 22222 47
Q ss_pred HHHHHHhHHHHHHHHHHHHhcCCchhhHHHHhccHHHHHHHHHHHHHhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHH
Q 010212 216 RIILMFGAIPALLTYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLH 295 (515)
Q Consensus 216 r~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (515)
..-|++.+.+.++..+.++++|...+.. +++...++ .+.. ..+.+.++...+..+..++..+.....-....
T Consensus 322 WlGFLi~g~~~~~~a~p~f~fPk~lp~~--~~~~~~~~---~~~~---k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~i 393 (735)
T KOG3626|consen 322 WLGFLICGALLLFSAVPLFFFPKELPKS--QKRKRARD---LHVL---KTESGGAKSDKTFGKKIKDFPKSIKRLLSNPI 393 (735)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcccCccc--cccchhhh---hccc---ccccccccCCcchhhhHHHHHHHHHHHhcCch
Confidence 7777777777777777777777664321 11000000 0000 00000000111111122333333222223345
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHhH-hcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhc--hhh
Q 010212 296 LIGTTVTWFLLDVAYYSQNLFQKDIFTA-IGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIG--RFA 372 (515)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g--~~~ 372 (515)
++...+...+....+.+...|+|.|++. +|.++.. +..+...+...+..+|.+++|++.+|+. .|.
T Consensus 394 f~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~-----------An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~ 462 (735)
T KOG3626|consen 394 FMLVVLASVIESLAITGYITFLPKYLETQFGISASL-----------ANILTGSIGVPAAAVGIFLGGLIIKKFKLSARG 462 (735)
T ss_pred HHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHH-----------HHHHhhhhhhhhhhhhhhccceeeeeecccHHH
Confidence 6777777777788889999999999987 4444333 2333445556666778889999999975 344
Q ss_pred HHHHHHHHHHHHHHH---HHhhhh------------------cc-c----------------------------------
Q 010212 373 IQLMGFFFMTVFMFA---LAIPYH------------------HW-T---------------------------------- 396 (515)
Q Consensus 373 ~~~~~~~~~~~~~~~---~~~~~~------------------~~-~---------------------------------- 396 (515)
...+..+...++++. ..+... .. .
T Consensus 463 ~a~~~~~~~~l~l~~~~~~~~igC~~~~~aG~~~~y~~~~~~~~~~~~~s~Cn~~C~C~~~~~~PVCg~~G~tY~SpChA 542 (735)
T KOG3626|consen 463 AAKFVIVCSVLSLLFYSLLFFIGCESSPVAGVTNSYEGSPAFTSHENPFSSCNSDCSCDTSEYEPVCGENGITYFSPCHA 542 (735)
T ss_pred HHHHHHHHHHHHHHHHHHHHEecCCCCcccceecCCCCCCccccCCCchhhhhcCCCCCCcCcCcccCCCCCEEeChhhh
Confidence 443333333333333 111100 00 0
Q ss_pred -------CC------------C--------------------chHHHHHHHHHHHHHhhcCccccccccccccCchhhhh
Q 010212 397 -------LP------------D--------------------HRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRS 437 (515)
Q Consensus 397 -------~~------------~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 437 (515)
.. . ....+++++++..+....+. ...+.++.+.+|+|.|.
T Consensus 543 GC~~~~~~~~~~~~ytnCsCv~~~~~~~~~a~~G~C~~~c~~~~~~Fl~~~~~~sf~~~~~~-~p~~~i~LR~V~~e~ks 621 (735)
T KOG3626|consen 543 GCTESSGTSDGNTIYTNCSCVPTNKNGNGSAKKGYCPNDCCRQFLIFLALFAIGSFIGALGA-VPGMLIVLRCVPPEEKS 621 (735)
T ss_pred CCcccccCCCCceeeccccccccccCCCceeecCCCCCCcchhhHHHHHHHHHHHHHHHhcc-CcceEEEEEccCchhch
Confidence 00 0 01223333444444444443 34556778999999999
Q ss_pred hhhHHHHHHhhh-hHHHHHHHHHHhhh
Q 010212 438 TCHGISAASGKA-GAIVGAFGFLYLAD 463 (515)
Q Consensus 438 ~~~g~~~~~~~~-g~~i~~~~~~~l~~ 463 (515)
.++|+..++.++ |.+-+|+++|++.|
T Consensus 622 ~AlG~~~~~irllg~IPsPIifG~~ID 648 (735)
T KOG3626|consen 622 FALGFQWMLIRLLGFIPSPIIFGAVID 648 (735)
T ss_pred hhhHHHHHHHHHHhcCCchHhhhhhHh
Confidence 999999877765 77889999999998
No 118
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.71 E-value=1.2e-18 Score=171.34 Aligned_cols=408 Identities=14% Similarity=0.137 Sum_probs=3.0
Q ss_pred HHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHH
Q 010212 28 AGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMM 107 (515)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~ 107 (515)
.++..+.+..........+..+.+.| +++.++.|++.+.+-++..+..++..++.+|..|-|.+-.|.++
T Consensus 8 ~~~~~~~q~~~~g~~~~~lttiErRF----------~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~ 77 (539)
T PF03137_consen 8 LCLLGLFQMMVSGYVNSSLTTIERRF----------GLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALL 77 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHH
Confidence 33444445666677778889999999 99999999999999999999999999999999888999999999
Q ss_pred HHHHHHHhhhc----CCCC----------------------------------------chhHHHHHHHHHHHhhhcccc
Q 010212 108 MVICSLASGLS----FGKE----------------------------------------PKAVMITLCFFRFWLGFGIGG 143 (515)
Q Consensus 108 ~~i~~~~~~~~----~~~~----------------------------------------~~~~~~~l~~~r~l~G~~~g~ 143 (515)
++++++++++= ..|. ....+..++++.++.|+|...
T Consensus 78 ~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~p 157 (539)
T PF03137_consen 78 MGLGSLLFALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATP 157 (539)
T ss_dssp --------------------------------------------------------------------------SSS---
T ss_pred HHHHHHHHhccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccC
Confidence 99999988751 1100 011256789999999999999
Q ss_pred ccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCC--ccCCCCCCccccCCC-c-hHHHHH
Q 010212 144 DYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFPAP--IYSANPAASTVPEAD-Y-IWRIIL 219 (515)
Q Consensus 144 ~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~-~-~wr~~f 219 (515)
.++...+|+-|..++++-+..+|+......+|.++|.++++.+.....+....+ ..+.+| .+.+ . .|..-|
T Consensus 158 l~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p-----~dp~WvGAWWLGf 232 (539)
T PF03137_consen 158 LYTLGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITP-----SDPRWVGAWWLGF 232 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CccceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCC-----CCccHHHHHHHHH
Confidence 999999999999999999999999999999999999999998876543221111 112222 1111 1 255555
Q ss_pred HHhHHHHHHHHHHHHhcCCchhhHHHHhccHHHHHHHHHHHHHhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHH
Q 010212 220 MFGAIPALLTYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGT 299 (515)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (515)
++.++..++..+.++++|+.-+.....++.++.+.++.++...+ +.++++..+......++.++.....-.++.++..
T Consensus 233 li~g~~~~l~aipl~~FPk~lp~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~ 310 (539)
T PF03137_consen 233 LICGILLFLSAIPLFFFPKKLPGTSERQEEKESSERKEEDSDKD--SFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCL 310 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHcCCccCCCcccccchhhhhhcchhhhhhh--cccccccccchhhhhhhHHHHHHHHhcChHHHHH
Confidence 55555555555555556654322100000000000000000000 0000000000111222322222222222345556
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHhH-hcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhc--hhhHHHH
Q 010212 300 TVTWFLLDVAYYSQNLFQKDIFTA-IGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIG--RFAIQLM 376 (515)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g--~~~~~~~ 376 (515)
.+..........+...|.|.|++. .+.++.. .+.+...+...+..+|.+++|++.+|++ .|+.+..
T Consensus 311 ~la~~~~~~~~~G~~tF~pKylE~QF~~sas~-----------A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~ 379 (539)
T PF03137_consen 311 ILAGVFESFIVSGFATFLPKYLESQFGLSASQ-----------ASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKF 379 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH-----------HHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHH
Confidence 666666667777888889988876 3333333 2233445555677788889999999975 3444444
Q ss_pred HHHHHHHHHHHHH---hhh----------hcc-----cCC-------------------------Cc----hHHHHHHHH
Q 010212 377 GFFFMTVFMFALA---IPY----------HHW-----TLP-------------------------DH----RIGFVVLYS 409 (515)
Q Consensus 377 ~~~~~~~~~~~~~---~~~----------~~~-----~~~-------------------------~~----~~~~~~~~~ 409 (515)
..+...++.++.. +.. ..+ ... .. .+.+++...
T Consensus 380 ~~v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~ 459 (539)
T PF03137_consen 380 CIVVSIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLF 459 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHH
Confidence 4333333333311 100 000 000 00 111222222
Q ss_pred HHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhh-hHHHHHHHHHHhhhc
Q 010212 410 LTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKA-GAIVGAFGFLYLADT 464 (515)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~-g~~i~~~~~~~l~~~ 464 (515)
+..........| ......+.+|+++|+.+.|+...+..+ |.+-+|+++|.+.|.
T Consensus 460 ~~~~~~~~~~~p-~~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~ 514 (539)
T PF03137_consen 460 ILSFFTFMSQVP-STLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDS 514 (539)
T ss_dssp --------------------------------------------------------
T ss_pred HHHHHHHhcccc-hheeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhh
Confidence 222333333333 335567889999999999999877765 778899999999984
No 119
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.69 E-value=1.4e-15 Score=151.23 Aligned_cols=170 Identities=14% Similarity=0.052 Sum_probs=126.1
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHH---hhhcCCCCchhHHHHHHHHHHHhhhc
Q 010212 64 TLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLA---SGLSFGKEPKAVMITLCFFRFWLGFG 140 (515)
Q Consensus 64 ~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~---~~~~~~~~~~~~~~~l~~~r~l~G~~ 140 (515)
+.+..+.++..+...++..++.++.|+++||+|||+.+..+.++..++.+. ...+.+ ...++++|++.|++
T Consensus 282 g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~ 355 (490)
T PRK10642 282 HYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNV------IGLIFAGLLMLAVI 355 (490)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCC------HHHHHHHHHHHHHH
Confidence 788878888888899999999999999999999999988877654443332 222333 57788899999988
Q ss_pred cccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHH
Q 010212 141 IGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILM 220 (515)
Q Consensus 141 ~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~ 220 (515)
.+........++.|.+|++.|++++++......++..++|.+.+.+.+..+ +|+.+++
T Consensus 356 ~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~----------------------~~~~~~~ 413 (490)
T PRK10642 356 LNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQ----------------------NLMMPAY 413 (490)
T ss_pred HHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----------------------CchHHHH
Confidence 777777788889999999999999997544455556778888877754322 3777777
Q ss_pred HhHHHHHHHHHHHHhcCCchhhHHHH----hccHHHHHHHHHHHH
Q 010212 221 FGAIPALLTYYWRMKMPETARYTALV----AKNAKQAAADMSKVL 261 (515)
Q Consensus 221 ~~~~~~~~~~~~~~~~~e~p~~~~~~----~~~~~~~~~~~~~~~ 261 (515)
+..+.+++.++..+++||+|+++..+ +++.+|+.+.+.+.+
T Consensus 414 ~~~~~~~i~~~~~~~~pes~~~~~~~~~~~~~~~~~a~~~l~~~~ 458 (490)
T PRK10642 414 YLMVVAVIGLITGVTMKETANRPLKGATPAASDIQEAKEILVEHY 458 (490)
T ss_pred HHHHHHHHHHHHHHHhccccCCCCCCccccccchhhHHHHhhccc
Confidence 66666776666667789999985321 255566666666654
No 120
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.65 E-value=4.9e-13 Score=122.67 Aligned_cols=354 Identities=12% Similarity=0.052 Sum_probs=206.1
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhh-----hhhH-HHHHHHHHHHHHHHhhhc-----C---CCCchhHH--
Q 010212 64 TLPDNVASAVNGVALCGTLAGQLFFGWLGDKMG-----RKRV-YGMTLMMMVICSLASGLS-----F---GKEPKAVM-- 127 (515)
Q Consensus 64 ~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~G-----rr~~-l~~~~~~~~i~~~~~~~~-----~---~~~~~~~~-- 127 (515)
+++..-.+.+.+...+.. ...+.+|+.+|+.+ ||.. +..|..+...+..+..++ . +.+.....
T Consensus 11 ~vpA~lv~~lval~~~~a-p~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~~g~ 89 (403)
T PF03209_consen 11 GVPAWLVALLVALHYLVA-PLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFWLGL 89 (403)
T ss_pred ccHHHHHHHHHHHHHHHH-HHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHH
Confidence 888888898888888774 57999999999998 7765 455666666555554442 2 00011112
Q ss_pred HHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccCCCCCCcc
Q 010212 128 ITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFPAPIYSANPAAST 207 (515)
Q Consensus 128 ~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 207 (515)
....+.-.+.|+|.+...+...+++.|..|+++|+++.++.....-+|.+++.++.+.+.+.+.
T Consensus 90 ~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s---------------- 153 (403)
T PF03209_consen 90 ALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFS---------------- 153 (403)
T ss_pred HHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccC----------------
Confidence 3456677788999999999999999999999999999999999999999999999888753222
Q ss_pred ccCCCchHHHHHHHhHH--HHHHHHHHHHhcCCchhhHHHHhccHHHHHHHHHHHHHhhhhHhhhhHHHhhcCCcchhhh
Q 010212 208 VPEADYIWRIILMFGAI--PALLTYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVELEAEQEKVEQEKGKNDFGLFS 285 (515)
Q Consensus 208 ~~~~~~~wr~~f~~~~~--~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (515)
.-|..-.+... ..++..++..+-.|.+.. ...+ .+++++.+.++.++
T Consensus 154 ------~~rL~~v~~~~a~i~~~l~~ia~wg~E~r~~--~~~~-----------------------~~~~~~~~f~~a~~ 202 (403)
T PF03209_consen 154 ------PERLIQVIQGVALIALLLNLIALWGQEPRRS--RRAA-----------------------AAERPRPPFREAWR 202 (403)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHHHHhcccCCc--cccc-----------------------CCCCCCccHHHHHH
Confidence 13333333222 222222222333333221 0000 00011222222222
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhh-hHHHhHhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHH
Q 010212 286 AKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQ-KDIFTAIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVAL 364 (515)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l 364 (515)
+....++.+.+....+.. ...++.....+ |+--+-.|.++. ++.. .......+.++|....+++
T Consensus 203 ~~~~~~~a~~f~~fl~l~---t~a~~~QD~iLEPygg~Vfgmsv~-------eTT~-----Lta~~~~G~L~G~~~~g~~ 267 (403)
T PF03209_consen 203 QVWASPQARRFFVFLFLG---TLAFFMQDVILEPYGGEVFGMSVG-------ETTR-----LTAFWGGGTLLGMLLAGFL 267 (403)
T ss_pred HHHhCCChhHHHHHHHHH---HHHHHhhHHHcCCchhHHcCCCHH-------HHHH-----HHHHHHHHHHHHHHHHHHH
Confidence 222222222232222222 12333333222 222222344333 3332 5555666677777777777
Q ss_pred HH-hhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHH
Q 010212 365 ID-KIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGIS 443 (515)
Q Consensus 365 ~d-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~ 443 (515)
.. |.++++...+++....+++.++..... . .+.+.+.....+++...+. ......+...++.+++..|..+|..
T Consensus 268 l~~~~~~~~~a~~G~~~~~~~f~lii~a~~-~---~~~~~~~~~~~l~G~g~G~-f~vgals~mM~lt~~~~aG~~mG~W 342 (403)
T PF03209_consen 268 LSRRLGKKRTAALGCLLGALAFALIILAGP-L---GSPWLFRPGVFLLGLGNGL-FTVGALSLMMDLTSAGRAGLFMGAW 342 (403)
T ss_pred hcCCCCchHHHHHHHHHHHHHHHHHHHHHh-c---ccchHHHHHHHHHHHhhhH-HHHHHHHHHHhCCCCcchhHHHHHH
Confidence 66 677788888888888888777665542 1 1222222222222222222 1122234456777788999999999
Q ss_pred HHHhhhhHHHHHHHHHHhhhc----------cCchHHHHHHHHHHHHHHHHH
Q 010212 444 AASGKAGAIVGAFGFLYLADT----------SGVKKALLILGGANFLGMLFT 485 (515)
Q Consensus 444 ~~~~~~g~~i~~~~~~~l~~~----------~g~~~~~~~~~~~~~~~~~~~ 485 (515)
...+.+...++..+.|.+.|. .+|...|.+=++..+++.++.
T Consensus 343 GaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll 394 (403)
T PF03209_consen 343 GAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLL 394 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999988871 235555555555555554443
No 121
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.58 E-value=4.4e-13 Score=128.83 Aligned_cols=364 Identities=12% Similarity=0.091 Sum_probs=210.9
Q ss_pred HHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHH
Q 010212 24 AIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGM 103 (515)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~ 103 (515)
+....++-.+..++.........+.....+..+.. ..+....+.-.....+...+.++..|.++||+|||..+..
T Consensus 23 ~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~-----~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~~ 97 (463)
T KOG2816|consen 23 LEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQ-----LENGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLL 97 (463)
T ss_pred HHHHHHHHHHHHHhcCcchhhhhhhhhcccccCcc-----chhhhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHHH
Confidence 33444444555555554445555555544411000 1111112222224467778999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhc--cccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHH
Q 010212 104 TLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFG--IGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGM 181 (515)
Q Consensus 104 ~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~--~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~ 181 (515)
......+..+...+... |.++ +.|+. .+.......++++|...+++|....++.......+..++|.
T Consensus 98 ~~~~~~l~~~~~~~~~~-------~~~~----~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~ 166 (463)
T KOG2816|consen 98 PLFGTILPALCLLFQGY-------WFFL----LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPA 166 (463)
T ss_pred HHHHHHHhHHHHHHHHH-------HHhh----hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHH
Confidence 99998888887777652 3333 44432 23446778899999999999999999999999999999999
Q ss_pred HHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHH-HHHhcCCchhhHHHHhccHHHHHHHHHHH
Q 010212 182 VAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYY-WRMKMPETARYTALVAKNAKQAAADMSKV 260 (515)
Q Consensus 182 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~-~~~~~~e~p~~~~~~~~~~~~~~~~~~~~ 260 (515)
+++.+... .|.-.+|.+..+..++..+ ..+++||+-.. ++++++ ..
T Consensus 167 ~~~~~~~~-----------------------~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~-----~~~~~~-----~~ 213 (463)
T KOG2816|consen 167 LGGYLVKF-----------------------LGIALVFLIAAASGILSLLYMLLFLPESLQE-----KERSDA-----TL 213 (463)
T ss_pred HHHHHHHh-----------------------cCchHHHHHHHHHHHHHHHHHhhccccccCc-----cccccc-----cc
Confidence 99999654 3366778887776666544 55778887432 111100 00
Q ss_pred HHhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhh-hhhHHHh-HhcccCCcccchhHHH
Q 010212 261 LQVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNL-FQKDIFT-AIGWIPKAKTMNAIEE 338 (515)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~ 338 (515)
.+.+... .......+.++.....+..+..+.+.+..+........... ..+.+.+ ..+|++....
T Consensus 214 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s------ 280 (463)
T KOG2816|consen 214 RELTPGS-------LDSSHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFS------ 280 (463)
T ss_pred cccCCCc-------ccchhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHH------
Confidence 0000000 00000001111111111111222222222221111111000 1112222 2455554422
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcC
Q 010212 339 VYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFG 418 (515)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (515)
...........+.-.+..+.+...++.|+....|.....+.....++....| .+... .........
T Consensus 281 -----~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w--------~~~~~-~v~~~~~~~ 346 (463)
T KOG2816|consen 281 -----DLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETW--------MMFAA-GVVVALAGI 346 (463)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccch--------hhhHH-HHHHHhhcc
Confidence 2222333333332333445788889999988888888888888888765321 11122 222223333
Q ss_pred ccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhh
Q 010212 419 PNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLAD 463 (515)
Q Consensus 419 ~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~ 463 (515)
..|...+..+...+++.+|++.++...+..+...++|.+.+.+..
T Consensus 347 ~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~ 391 (463)
T KOG2816|consen 347 VFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFA 391 (463)
T ss_pred hhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHH
Confidence 456777888888999999999999999999999999999988864
No 122
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.58 E-value=8.7e-14 Score=141.50 Aligned_cols=141 Identities=14% Similarity=0.109 Sum_probs=121.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhh
Q 010212 70 ASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSA 149 (515)
Q Consensus 70 ~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~ 149 (515)
..+...+..++..++.++.|+++||+|||++++++.++.+++.++.++.++ ...+++.+++.|++.++..+...
T Consensus 597 ~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s------~~~ll~~~~l~g~~~~~~~~~~~ 670 (742)
T TIGR01299 597 IYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNS------ESAMIALLCLFGGLSIAAWNALD 670 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcc------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566777899999999999999999999999999999999999999887 67788888998988888889999
Q ss_pred HhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHH
Q 010212 150 TIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLT 229 (515)
Q Consensus 150 ~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~ 229 (515)
++++|++|.++|++++|+......+|.++||.+++.+... +...+|++.++..++.
T Consensus 671 a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~------------------------~~~~pf~i~a~~lll~ 726 (742)
T TIGR01299 671 VLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI------------------------TKAAPILFASAALACG 726 (742)
T ss_pred HHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------------------------hhHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999877532 1456777777777776
Q ss_pred HHHHHhcCCch
Q 010212 230 YYWRMKMPETA 240 (515)
Q Consensus 230 ~~~~~~~~e~p 240 (515)
.++..++||+.
T Consensus 727 ~ll~~~LPET~ 737 (742)
T TIGR01299 727 GLLALKLPDTR 737 (742)
T ss_pred HHHHHhCCCCc
Confidence 66667789874
No 123
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.57 E-value=1.5e-14 Score=118.05 Aligned_cols=136 Identities=26% Similarity=0.330 Sum_probs=117.5
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhh
Q 010212 74 NGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMS 153 (515)
Q Consensus 74 ~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~ 153 (515)
.+.+.++..+++++.|++.||+|||+.+..+..+..++.+...+.++ ++.+.+.+++.|++.+...+....++.
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~ 77 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSN------ITVLIIARFLQGFGAAFALVAGAALIA 77 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcc------HHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 34567888999999999999999999999999999999988888877 788999999999999998999999999
Q ss_pred hccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHH
Q 010212 154 EYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWR 233 (515)
Q Consensus 154 e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~ 233 (515)
|.+|+++|++..++......+|..+++.+.+.+. +..+|++.+++.++..++..+..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~ 134 (141)
T TIGR00880 78 DIYPPEERGVALGLMSAGIALGPLLGPPLGGVLA-----------------------QFLGWRAPFLFLAILALAAFILL 134 (141)
T ss_pred HHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHh-----------------------cccchHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999885 34569999998776666554443
Q ss_pred -HhcCC
Q 010212 234 -MKMPE 238 (515)
Q Consensus 234 -~~~~e 238 (515)
+..||
T Consensus 135 ~~~~~~ 140 (141)
T TIGR00880 135 AFLLPE 140 (141)
T ss_pred hhcCCC
Confidence 44454
No 124
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.55 E-value=8.4e-14 Score=135.35 Aligned_cols=158 Identities=12% Similarity=0.048 Sum_probs=127.7
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccc
Q 010212 65 LPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGD 144 (515)
Q Consensus 65 ~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~ 144 (515)
.+.++.+...++..++..++.++.|+++||+|||+++..+.++.+++..+.....+. ...++.+++.+++.|++.+..
T Consensus 248 ~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~--~~~~~~l~l~~~l~g~~~~~~ 325 (418)
T TIGR00889 248 FVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPE--YFGYALLFLSMIVYGCAFDFF 325 (418)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcc--hhhHHHHHHHHHHHHHHHHHH
Confidence 345678999999999999999999999999999999999999998887766664321 001456788899999999988
Q ss_pred cchhhHhhhhccccccchhHHHHHH-HHHHHHHHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhH
Q 010212 145 YPLSATIMSEYANKKTRGAFIAAVF-AMQGFGILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGA 223 (515)
Q Consensus 145 ~~~~~~~i~e~~~~~~r~~~~~~~~-~~~~~G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~ 223 (515)
.+....++.|++|+++|+++.++.+ ...++|.++||++++.+.+..+. ...+||+..|.+.+
T Consensus 326 ~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~-----------------~~~~~~~~~f~~~~ 388 (418)
T TIGR00889 326 NISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFA-----------------YGTFDWQTMWLFFA 388 (418)
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcc-----------------ccCCchHHHHHHHH
Confidence 8888999999999999999999997 67889999999999999876542 12257999999876
Q ss_pred HHHHH-HHHHHHhcCCchh
Q 010212 224 IPALL-TYYWRMKMPETAR 241 (515)
Q Consensus 224 ~~~~~-~~~~~~~~~e~p~ 241 (515)
+..++ .++..++++|+.+
T Consensus 389 ~~~~i~~~l~~~~~~~~~~ 407 (418)
T TIGR00889 389 GYIAILAVLFMIFFKYSHN 407 (418)
T ss_pred HHHHHHHHHHHHHhCCccc
Confidence 66555 4455567787744
No 125
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.50 E-value=3.6e-13 Score=131.76 Aligned_cols=150 Identities=9% Similarity=0.037 Sum_probs=124.6
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhcccc
Q 010212 64 TLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGG 143 (515)
Q Consensus 64 ~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 143 (515)
+.+..+.|++.++..++..++.+++|++.||+|||+.+..+..+.+++.++.+++++ .+.+++.+++.|++.+.
T Consensus 258 ~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~------~~~~~~~~~l~g~~~~~ 331 (420)
T PRK09528 258 EQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATG------PLEVSILKLLHAFEVPF 331 (420)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhccc------HHHHHHHHHHHHHHHHH
Confidence 456678899999999999999999999999999999999999999999888888888 78888999999998888
Q ss_pred ccchhhHhhhhccccccchhHHHH-HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHh
Q 010212 144 DYPLSATIMSEYANKKTRGAFIAA-VFAMQGFGILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFG 222 (515)
Q Consensus 144 ~~~~~~~~i~e~~~~~~r~~~~~~-~~~~~~~G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~ 222 (515)
..+....++.|.+|++.|+...+. ++....+|.++++.+.+.+.+ ..||+..|.+.
T Consensus 332 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~-----------------------~~G~~~~f~~~ 388 (420)
T PRK09528 332 LLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYD-----------------------SIGFQGTYLIL 388 (420)
T ss_pred HHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHH-----------------------hhCchHHHHHH
Confidence 778888999999999999887655 667788999999999999964 34599999986
Q ss_pred HHHHHHH-HHHHHhcCCchhh
Q 010212 223 AIPALLT-YYWRMKMPETARY 242 (515)
Q Consensus 223 ~~~~~~~-~~~~~~~~e~p~~ 242 (515)
++..++. .+..+.++++|+.
T Consensus 389 ~~~~~i~~~~~~~~~~~~~~~ 409 (420)
T PRK09528 389 GGIVLLFTLISVFTLSGDREL 409 (420)
T ss_pred HHHHHHHHHHHHHHhcCCchh
Confidence 6665554 4444555554443
No 126
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.50 E-value=1.5e-12 Score=126.08 Aligned_cols=145 Identities=14% Similarity=0.206 Sum_probs=119.7
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhcccc
Q 010212 64 TLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGG 143 (515)
Q Consensus 64 ~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 143 (515)
+.+..+.+++.+...++..++.+++|+++||+|||+.+..+.....+........++ .+.+++.+++.+++.+.
T Consensus 248 ~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~l~~~~l~~~~~g~ 321 (393)
T PRK15011 248 HLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHS------PAILLGLQLLNAIYIGI 321 (393)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhh------HHHHHHHHHHHHHHHHH
Confidence 889999999988888888889999999999999999888777666655555555555 67778899988888777
Q ss_pred ccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhH
Q 010212 144 DYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGA 223 (515)
Q Consensus 144 ~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~ 223 (515)
..+....+..|.+|+ +|+++.++++....+|..+++.+++.+.+. .||+..|++.+
T Consensus 322 ~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~-----------------------~g~~~~~~~~~ 377 (393)
T PRK15011 322 LGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEI-----------------------WNYHAVFWFAL 377 (393)
T ss_pred HHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------hhhHHHHHHHH
Confidence 777778888999985 599999999999999999999999998643 45999999888
Q ss_pred HHHHHHHHHHHhcCC
Q 010212 224 IPALLTYYWRMKMPE 238 (515)
Q Consensus 224 ~~~~~~~~~~~~~~e 238 (515)
+..++.++..++.||
T Consensus 378 ~~~~~~~~~~~~~~~ 392 (393)
T PRK15011 378 VMIIATLFCLLRIKD 392 (393)
T ss_pred HHHHHHHHHHHhhcC
Confidence 888877777766665
No 127
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.49 E-value=1.6e-12 Score=126.85 Aligned_cols=156 Identities=16% Similarity=0.066 Sum_probs=126.8
Q ss_pred HHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhcCCCC
Q 010212 43 SLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLSFGKE 122 (515)
Q Consensus 43 ~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~ 122 (515)
....|.+.++. |.+..+.+.+.+...++..++.++.|+++||+|||+.+..+.+...++.++..+.++
T Consensus 240 ~~~~p~~~~~~----------g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~-- 307 (406)
T PRK11551 240 LNWLPSLLVGQ----------GLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPS-- 307 (406)
T ss_pred HHHHHHHHHhC----------CCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCc--
Confidence 33456666667 889999999999999999999999999999999999988877777777666666666
Q ss_pred chhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccCCC
Q 010212 123 PKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFPAPIYSAN 202 (515)
Q Consensus 123 ~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~~~~~~~~ 202 (515)
.+.+.+..++.|++.++..+...+++.|.+|+++|++..++.+....+|..+||.+++.+.+..
T Consensus 308 ----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~------------ 371 (406)
T PRK11551 308 ----FAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALG------------ 371 (406)
T ss_pred ----HHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccC------------
Confidence 6777778888898887778888999999999999999999999999999999999999986322
Q ss_pred CCCccccCCCchHHHHHHHhHHHHHHHHHHHHhc
Q 010212 203 PAASTVPEADYIWRIILMFGAIPALLTYYWRMKM 236 (515)
Q Consensus 203 ~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~ 236 (515)
.+|...+++.....++..+..+.+
T Consensus 372 ----------~~~~~~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 372 ----------RSTVGVIGASIPVILVAALAALLL 395 (406)
T ss_pred ----------CchHHHHHHHHHHHHHHHHHHHHH
Confidence 237777776665555554444444
No 128
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.49 E-value=3.8e-12 Score=123.48 Aligned_cols=387 Identities=14% Similarity=0.110 Sum_probs=210.3
Q ss_pred HHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhh---h--hhhHHHHHHHHHHHHHHHhhh
Q 010212 43 SLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKM---G--RKRVYGMTLMMMVICSLASGL 117 (515)
Q Consensus 43 ~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~---G--rr~~l~~~~~~~~i~~~~~~~ 117 (515)
....+.+.+++ ++++++.....+...+... ..+++|.++|.+ | ||+-++++.++..++.+..+.
T Consensus 10 ~~~~~~l~~~l----------~ls~~~~~~~~~~~~lPw~-~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~ 78 (433)
T PF03092_consen 10 LAIYPFLKDDL----------GLSPAQLQRLSSLASLPWS-IKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLAL 78 (433)
T ss_pred HHHHHHHHHHc----------CCCHHHHHHHHHHHhCchH-HhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHh
Confidence 45677888889 9999999998888888754 578899999985 3 444567777777666666665
Q ss_pred cCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccc--cccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 010212 118 SFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYAN--KKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFP 195 (515)
Q Consensus 118 ~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~--~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~ 195 (515)
.+... .+.....+.-++..+|.+....++.+++.|... +++||...+.......+|.+++..++|.+.+
T Consensus 79 ~~~~~--~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~------- 149 (433)
T PF03092_consen 79 LPASE--SSAAIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLD------- 149 (433)
T ss_pred ccccc--chhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhh-------
Confidence 44411 114566677788889999999999999999884 3347788888888899999999999988853
Q ss_pred CCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHH-HHHhcCCchhhHHHHhc-cHHHHHHHHHHHHHhhhhHhhhhHH
Q 010212 196 APIYSANPAASTVPEADYIWRIILMFGAIPALLTYY-WRMKMPETARYTALVAK-NAKQAAADMSKVLQVELEAEQEKVE 273 (515)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~-~~~~~~e~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (515)
..++|..|.+.++...+..+ ..+..+|.++....+.. ..++..+.... ..
T Consensus 150 ----------------~~~~~~~f~i~~~~~~l~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~------------~~ 201 (433)
T PF03092_consen 150 ----------------SFGPQGVFLISAALPLLMLIVALFLLEERKVRPADEVFSFGKEEVPCLFG------------SF 201 (433)
T ss_pred ----------------cCCCeEEehHHHHHHHHHHHHHHHhhhhccccccchhhcccccccchhhH------------HH
Confidence 34478888886666555444 34444442111000000 00000000000 00
Q ss_pred HhhcCCcchhhhhhhhhhhhHHHHHHHH-HHHHHHHHHHHHhhhhhHHHhHhcccCCcccchhHHHHHHHHHHHHHHHHh
Q 010212 274 QEKGKNDFGLFSAKFVRRHGLHLIGTTV-TWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKIARAQTLIALC 352 (515)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (515)
++.-...++.++.+.. +...+ ..+......... .. ...-+.....+ .++.+....+. ...+..+
T Consensus 202 ~~~~~~l~~~~~~~~i-------~~~~~~~~~~~~~~~~~~---~a---~~fy~~~~~~~-gp~fs~~f~~~-~~~vg~~ 266 (433)
T PF03092_consen 202 REQLSELWRALQQRAI-------WQPILFFIFFFNLPPSIS---SA---SSFYFQTDALG-GPHFSPSFYGT-LSIVGSI 266 (433)
T ss_pred HHHHHHHHHHHhhhHH-------HHHHHHHHHHHHhccCCC---Cc---cEEEEEecccc-ccccCHHHHHH-HHHHHHH
Confidence 0111111222222211 11111 111100000000 00 00001111111 00111111222 2355556
Q ss_pred hhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccC---CCchHHHHHHHHHHHHHhhcCccccccccccc
Q 010212 353 STVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTL---PDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAE 429 (515)
Q Consensus 353 ~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (515)
+.++|..+......+..-|+++....++..+..+.-......+.. -++.+..+.-..+..........|. ...++|
T Consensus 267 ~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~~~i~~mP~-lvl~a~ 345 (433)
T PF03092_consen 267 ASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVIGMIAFMPS-LVLAAR 345 (433)
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHHHHHHHHHH-HHHHHH
Confidence 666666666665556666776666555444333322211111110 0111222222223333333333333 356789
Q ss_pred cCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccC--------chHHHHHHHHHHHHHHHHHHhccccCC
Q 010212 430 IFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSG--------VKKALLILGGANFLGMLFTFLVPESKG 493 (515)
Q Consensus 430 ~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g--------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (515)
+.|+..-|+.+++...+.|+|..++..+...+.+..+ .....++..++.++...+..++|+.++
T Consensus 346 lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~ll~lLp~~~~ 417 (433)
T PF03092_consen 346 LCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLPLLFLLPPQKR 417 (433)
T ss_pred HCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHHHcCCCch
Confidence 9999999999999999999999999999988887544 223344445555555555556776544
No 129
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.48 E-value=8.6e-13 Score=127.33 Aligned_cols=149 Identities=16% Similarity=0.165 Sum_probs=124.9
Q ss_pred HHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhcCCCCc
Q 010212 44 LVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLSFGKEP 123 (515)
Q Consensus 44 ~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~ 123 (515)
...+...+++ +.+..+.+++.+.+.++..+++++.|++.||+|||+.+..+..+..++.++..+.++..
T Consensus 226 ~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~- 294 (377)
T TIGR00890 226 GLYKPYGQSL----------GLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLN- 294 (377)
T ss_pred HHHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccch-
Confidence 3444455667 78888999999999999999999999999999999999999999988888877776420
Q ss_pred hhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccCCCC
Q 010212 124 KAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFPAPIYSANP 203 (515)
Q Consensus 124 ~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~~~~~~~~~ 203 (515)
...+++..++.|++.+...+..+.++.|.+|+++|+++.++.+....+|..++|.+.+.+.
T Consensus 295 ---~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~---------------- 355 (377)
T TIGR00890 295 ---DVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHAL---------------- 355 (377)
T ss_pred ---hHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHH----------------
Confidence 2345567788888888888888899999999999999999999999999999999999885
Q ss_pred CCccccCCCchHHHHHHHhHHHHHHH
Q 010212 204 AASTVPEADYIWRIILMFGAIPALLT 229 (515)
Q Consensus 204 ~~~~~~~~~~~wr~~f~~~~~~~~~~ 229 (515)
+..||++.|++.++..++.
T Consensus 356 -------~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 356 -------TEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred -------hhhchhhHHHHHHHHHHHh
Confidence 3456999998877666554
No 130
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.48 E-value=3e-12 Score=122.23 Aligned_cols=143 Identities=24% Similarity=0.291 Sum_probs=131.1
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhh-HHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccc
Q 010212 64 TLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKR-VYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIG 142 (515)
Q Consensus 64 ~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~-~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g 142 (515)
+.++.+.+++.+...++..++.++.|++.||+|||+ .+..+..+..++.+.....++ .+.+++..++.|++.+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~------~~~~~~~~~~~g~~~~ 280 (352)
T cd06174 207 GLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPS------LALLLVALLLLGFGLG 280 (352)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhcc------HHHHHHHHHHHHHHHh
Confidence 678899999999999999999999999999999999 999999999999999998887 7889999999999999
Q ss_pred cccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHh
Q 010212 143 GDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFG 222 (515)
Q Consensus 143 ~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~ 222 (515)
...+....++.|..|+++|++.+++.+....+|..+++.+.+.+. +..+|+..+++.
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~-----------------------~~~~~~~~~~~~ 337 (352)
T cd06174 281 FAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLL-----------------------DTGGYGGVFLIL 337 (352)
T ss_pred ccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----------------------cccCcchHHHHH
Confidence 999999999999999999999999999999999999999999985 455699999998
Q ss_pred HHHHHHHHHHHHh
Q 010212 223 AIPALLTYYWRMK 235 (515)
Q Consensus 223 ~~~~~~~~~~~~~ 235 (515)
++..++..+..++
T Consensus 338 ~~~~~i~~i~~~~ 350 (352)
T cd06174 338 AALALLAALLLLL 350 (352)
T ss_pred HHHHHHHHHHhee
Confidence 8887776665443
No 131
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.47 E-value=6.3e-13 Score=121.34 Aligned_cols=183 Identities=14% Similarity=0.125 Sum_probs=139.7
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHh
Q 010212 288 FVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDK 367 (515)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~ 367 (515)
.++.+.+.++.+.+.+......--....-.|.+.++.+++..+.+. ......+..-++.++.|.++||
T Consensus 23 y~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~------------i~s~f~i~YG~sKf~~G~~sDr 90 (448)
T COG2271 23 YKRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGI------------LGSAFSITYGVSKFVMGVLSDR 90 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHH------------HHHHHHHHHHHHHHHhhhhccc
Confidence 3344445666666666666666666777888888887777766544 4555556666777899999999
Q ss_pred hchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHh
Q 010212 368 IGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASG 447 (515)
Q Consensus 368 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~ 447 (515)
.+.|+.+..++++++++.+++++.. +.....++..+-..+-+.+ .|.....+..-+|+++||+..++.|+..
T Consensus 91 ~npr~fm~~gLilsai~nil~Gfs~-------s~~~~~~l~~lng~fQg~G-wpp~~~~i~~Wfsr~eRG~~~siWn~sh 162 (448)
T COG2271 91 SNPRYFMAFGLILSAIVNILFGFSP-------SLFLFAVLWVLNGWFQGMG-WPPCARTITHWFSRKERGTWWSIWNTSH 162 (448)
T ss_pred CCCceeehHHHHHHHHHHHHHhhhh-------HHHHHHHHHHHHHHHhcCC-CcHHHHHHHHHcCccccCceEEEehhhh
Confidence 9999999999999999999998765 2233333333444444444 5667778889999999999999999999
Q ss_pred hhhHHHHHHHH--HHhhhccCchHHHHHHHHHHHHHHHHHH-hccc
Q 010212 448 KAGAIVGAFGF--LYLADTSGVKKALLILGGANFLGMLFTF-LVPE 490 (515)
Q Consensus 448 ~~g~~i~~~~~--~~l~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~ 490 (515)
|+|+.+.|.+. +.+.++.+|+.+|++-++++++..++.+ ..++
T Consensus 163 NiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd 208 (448)
T COG2271 163 NIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRD 208 (448)
T ss_pred hcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999 9998888999999999998888777777 4443
No 132
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.47 E-value=2.3e-12 Score=126.43 Aligned_cols=175 Identities=10% Similarity=0.024 Sum_probs=124.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHH
Q 010212 297 IGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLM 376 (515)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~ 376 (515)
+...+.++......+......|.+.++.|+++.+.+. ......++..++.++.|++.||+|||+.+..
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~------------~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~ 93 (434)
T PRK11663 26 ITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGL------------LATLFYITYGVSKFVSGIVSDRSNARYFMGI 93 (434)
T ss_pred HHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHH------------HHHHHHHHHHHHHhhhhHHHhhcCCchhHHH
Confidence 3344444444444455667788888887776544222 5566677778889999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHH
Q 010212 377 GFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAF 456 (515)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~ 456 (515)
+.++..++.++..... ....+.+..+..+.......+...+++.|.+|+++|++++++.+....+|..++|.
T Consensus 94 ~~~~~~~~~~~~~~~~--------~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~ 165 (434)
T PRK11663 94 GLIATGIINILFGFSS--------SLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPL 165 (434)
T ss_pred HHHHHHHHHHHHHHHh--------HHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9888888877665543 12222222222222222234566778899999999999999999999999999999
Q ss_pred HHHHhhhccCchHHHHHHHHHHHHHHHHHH-hcccc
Q 010212 457 GFLYLADTSGVKKALLILGGANFLGMLFTF-LVPES 491 (515)
Q Consensus 457 ~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~ 491 (515)
+.+.+.+..||+..|.+.+++.++..+... +++|+
T Consensus 166 ~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~ 201 (434)
T PRK11663 166 VVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRDK 201 (434)
T ss_pred HHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999888776655544333 45543
No 133
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.45 E-value=4.9e-12 Score=122.99 Aligned_cols=142 Identities=19% Similarity=0.169 Sum_probs=120.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchh
Q 010212 69 VASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLS 148 (515)
Q Consensus 69 ~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~ 148 (515)
+.++..+.+.++..++.++.|++.||+|||+.+..+..+.+++.++..+.++ .+.+++.+++.|++.+...+..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~G~~~~~~~~~~ 323 (399)
T PRK05122 250 GAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPS------PWMALIGAALTGFGFSLVFPAL 323 (399)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcc------HHHHHHHHHHHHHhHHHHHHHH
Confidence 4566677888899999999999999999999999998888888888888777 6778889999999999888888
Q ss_pred hHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHH
Q 010212 149 ATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALL 228 (515)
Q Consensus 149 ~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~ 228 (515)
...+.|.+|+++|+++.++++....+|..+++.+.+.+.+. .||+..|++.++..++
T Consensus 324 ~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~-----------------------~g~~~~~~~~~~~~~~ 380 (399)
T PRK05122 324 GVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASW-----------------------FGYPSIFLAAALAALL 380 (399)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------cCHHHHHHHHHHHHHH
Confidence 88888999999999999999999999999999998888643 4599999987777777
Q ss_pred HHHHHHhcCCc
Q 010212 229 TYYWRMKMPET 239 (515)
Q Consensus 229 ~~~~~~~~~e~ 239 (515)
..+..+++++.
T Consensus 381 ~~~~~~~~~~~ 391 (399)
T PRK05122 381 GLALTWLLYRR 391 (399)
T ss_pred HHHHHHHhccc
Confidence 66555555443
No 134
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.44 E-value=6.6e-11 Score=107.09 Aligned_cols=185 Identities=12% Similarity=0.059 Sum_probs=120.4
Q ss_pred chhHHHHHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhh
Q 010212 18 QWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGR 97 (515)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Gr 97 (515)
.+.|+.-+.+-.++...+.+. +|.+-.+-+++ +.++.|++.+....+....+...+.|.++||+||
T Consensus 33 ~~Fqr~yl~vY~La~~aDWLQ----GpY~Y~LY~~y----------g~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Gr 98 (354)
T PF05631_consen 33 RRFQRKYLLVYLLAMAADWLQ----GPYLYALYESY----------GFSEHQIAILFVAGFASSAIFGTFVGSLADRYGR 98 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHhh----cchhHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 334444444445555555554 35555555677 9999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhh-hhccccccchhHHHH-HHHHHHHH
Q 010212 98 KRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIM-SEYANKKTRGAFIAA-VFAMQGFG 175 (515)
Q Consensus 98 r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i-~e~~~~~~r~~~~~~-~~~~~~~G 175 (515)
|+.-++.+++.+++++.- ..++ ++.++++|++.|++....+.+--++. .|.-.++.+....+- +.....++
T Consensus 99 k~~cl~~cily~~scl~k-~~~~------~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~ 171 (354)
T PF05631_consen 99 KKACLLFCILYSLSCLTK-HSSN------YPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFG 171 (354)
T ss_pred hHHHHHHHHHHHHHHHHH-hccc------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHH
Confidence 999999999999988644 4466 79999999999999999888877764 454322212122222 21111133
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHH-HhcCCch
Q 010212 176 ILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWR-MKMPETA 240 (515)
Q Consensus 176 ~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~-~~~~e~p 240 (515)
..+-.+.++.+.+..-+ ....|-..+|.......++..++. ...+|.+
T Consensus 172 n~~vAI~aGv~a~~l~~-----------------~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENy 220 (354)
T PF05631_consen 172 NGVVAIGAGVVANVLAD-----------------WFGFGPVAPFDAAIVLLAVAAVLILKTWPENY 220 (354)
T ss_pred hHHHHHHHhHHHHHHHH-----------------HhCCCCcchHHHHHHHHHHHHHHHHhcccccC
Confidence 33334444444433221 112335778888766666654433 3455543
No 135
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.44 E-value=4.9e-12 Score=122.27 Aligned_cols=176 Identities=8% Similarity=0.065 Sum_probs=125.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHH
Q 010212 296 LIGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQL 375 (515)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~ 375 (515)
+....+..+......+......|.+.++.|+++.+.+. ......++..++.++.|++.||+|||+.+.
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~------------~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~ 89 (394)
T PRK10213 22 VFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQ------------SVTVTAFVAMFASLFITQTIQATDRRYVVI 89 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHhcccCcHHHHH
Confidence 33344443444344455555677787888877655332 445556667778889999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHH
Q 010212 376 MGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGA 455 (515)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~ 455 (515)
.+..+.+++.++..... +.....+.-+..+.......+...+++.|.+|+++|+++.++.....+++..++|
T Consensus 90 ~~~~~~~~~~~~~~~~~--------~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~ 161 (394)
T PRK10213 90 LFAVLLTLSCLLVSFAN--------SFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAA 161 (394)
T ss_pred HHHHHHHHHHHHHHHHC--------hHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888776665432 2223333333334443334567778889999999999999999999999999999
Q ss_pred HHHHHhhhccCchHHHHHHHHHHHHHHHHHH-hcccc
Q 010212 456 FGFLYLADTSGVKKALLILGGANFLGMLFTF-LVPES 491 (515)
Q Consensus 456 ~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~ 491 (515)
.+.+.+.+..||+..|++.+++.+++.+... ..||.
T Consensus 162 ~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~ 198 (394)
T PRK10213 162 PLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSL 198 (394)
T ss_pred HHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 9999999999999999888776666554443 34543
No 136
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.43 E-value=5.4e-12 Score=122.75 Aligned_cols=178 Identities=11% Similarity=0.014 Sum_probs=127.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHH
Q 010212 295 HLIGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQ 374 (515)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~ 374 (515)
.+....+.+.+............|.+.++.++++.+.+. ......++..++.+..|++.||+|||+.+
T Consensus 9 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~------------~~s~~~~~~~~~~~~~g~l~dr~G~r~~~ 76 (412)
T TIGR02332 9 LIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGL------------AATLFYAAYVICGIPSNIMLAIIGARRWI 76 (412)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHH------------HHHHHHHHHHHHHhhHHHHHHHhChHHHH
Confidence 344444455554555555666667666777776655333 55566677778888999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHH
Q 010212 375 LMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVG 454 (515)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~ 454 (515)
..+.++..++.++..+.. +...+.+.-++.+....+..+....++.|.+|+++|++++++.+....+|..++
T Consensus 77 ~~~~~~~~~~~~~~~~~~--------~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~ 148 (412)
T TIGR02332 77 AGIMVLWGIASTATMFAT--------GPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALG 148 (412)
T ss_pred HHHHHHHHHHHHHHHHhc--------CHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999888888887776543 222333333344444444456666788999999999999999999999999999
Q ss_pred HHHHHHhhh------ccCchHHHHHHHHHHHHHHHHHH-hccccC
Q 010212 455 AFGFLYLAD------TSGVKKALLILGGANFLGMLFTF-LVPESK 492 (515)
Q Consensus 455 ~~~~~~l~~------~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~ 492 (515)
+.+.+.+.+ ..||+..|.+.++..++..++.+ ++||++
T Consensus 149 ~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p 193 (412)
T TIGR02332 149 LILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSP 193 (412)
T ss_pred HHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCc
Confidence 999998864 36899999988777766555444 666654
No 137
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.43 E-value=2.4e-12 Score=126.73 Aligned_cols=153 Identities=11% Similarity=0.089 Sum_probs=120.9
Q ss_pred HHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhh--hhhhhHHH--HHHHHHHHHHHHhh
Q 010212 41 CISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDK--MGRKRVYG--MTLMMMVICSLASG 116 (515)
Q Consensus 41 ~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr--~Grr~~l~--~~~~~~~i~~~~~~ 116 (515)
.....+|.+.++. +.+..+.+++.+...++..+++++.|+++|| +++|+... .+.++.+++.++..
T Consensus 259 ~~~~~l~~~~~~~----------g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~ 328 (455)
T TIGR00892 259 APIIFLVPYAKDK----------GVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCA 328 (455)
T ss_pred chHHHHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334556566677 8999999999999999999999999999998 33443333 33444445555666
Q ss_pred hcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCC
Q 010212 117 LSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFPA 196 (515)
Q Consensus 117 ~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~~ 196 (515)
..++ ++.+++.+++.|++.+...+...+++.|.+|++++++..++++....+|..+||.+++.+.+..+
T Consensus 329 ~~~~------~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g----- 397 (455)
T TIGR00892 329 LAGD------YTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATK----- 397 (455)
T ss_pred Hhch------HHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcC-----
Confidence 6666 78889999999999999889999999999999999999999999999999999999998853322
Q ss_pred CccCCCCCCccccCCCchHHHHHHHhHHHHHHHHH
Q 010212 197 PIYSANPAASTVPEADYIWRIILMFGAIPALLTYY 231 (515)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~ 231 (515)
+|++.|++.++..++..+
T Consensus 398 -----------------~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 398 -----------------NYKYIFYASGSIVVSAGL 415 (455)
T ss_pred -----------------CcchHHHHhhHHHHHHHH
Confidence 399999887766555433
No 138
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.42 E-value=9e-12 Score=121.65 Aligned_cols=137 Identities=19% Similarity=0.332 Sum_probs=118.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchh
Q 010212 69 VASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLS 148 (515)
Q Consensus 69 ~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~ 148 (515)
..+.+.+...++..++.++.|+++||+|||+.+..+..+..++.+...+.++ .+.+++.+++.|++.+...+..
T Consensus 259 ~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~ 332 (408)
T PRK09874 259 ISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQT------PLQLGILRFLLGAADGALLPAV 332 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhcc------HHHHHHHHHHHHhhhHhhHHHH
Confidence 3566777788888999999999999999999999998888888877777776 6888899999999999999999
Q ss_pred hHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHH
Q 010212 149 ATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALL 228 (515)
Q Consensus 149 ~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~ 228 (515)
.+++.+..|+++|++.+++......+|..+||.+++.+. +..||+..|++.++..++
T Consensus 333 ~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~-----------------------~~~g~~~~f~~~~~~~l~ 389 (408)
T PRK09874 333 QTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAIS-----------------------ANYGFRAVFLVTAGVVLF 389 (408)
T ss_pred HHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHH-----------------------hhcchhHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999985 445699999998877776
Q ss_pred HHHHHH
Q 010212 229 TYYWRM 234 (515)
Q Consensus 229 ~~~~~~ 234 (515)
..+..+
T Consensus 390 ~~~~~~ 395 (408)
T PRK09874 390 NAVYSW 395 (408)
T ss_pred HHHHHH
Confidence 655443
No 139
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.42 E-value=5.1e-12 Score=122.33 Aligned_cols=167 Identities=16% Similarity=0.140 Sum_probs=121.2
Q ss_pred HHHHHHHhhhhhHHHhHhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHH
Q 010212 307 DVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMF 386 (515)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~ 386 (515)
...........|.+.++.|.++.+.+. ......++..++.++.|++.||+|||+.+..+..+..++.+
T Consensus 18 ~~~~~~~~~~~p~~~~~~g~s~~~~g~------------~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~ 85 (385)
T TIGR00710 18 PLGIDMYLPAFPEIAADLSTPASIVQM------------TLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSL 85 (385)
T ss_pred HHHHHHhcccHHHHHHHhCCCHHHHHH------------HHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHH
Confidence 334444445567777777766544222 55666777788899999999999999999998888887777
Q ss_pred HHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccC
Q 010212 387 ALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSG 466 (515)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g 466 (515)
...... ......+..+..+.......+...+++.|.+|+++|+++.++.+....++..+++.+.+.+.+..+
T Consensus 86 ~~~~~~--------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 157 (385)
T TIGR00710 86 GLALSN--------NIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLS 157 (385)
T ss_pred HHHHHc--------cHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 665533 222233333333333333456667888999999999999999999999999999999999999899
Q ss_pred chHHHHHHHHHHHHHHHHHH-hccccCC
Q 010212 467 VKKALLILGGANFLGMLFTF-LVPESKG 493 (515)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 493 (515)
|+..+.+.+++.++..+..+ ..||+++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (385)
T TIGR00710 158 WHAIFAFLSLAGILLSALIFFILPETLP 185 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 99999888877777666555 4555443
No 140
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.42 E-value=8.5e-12 Score=121.68 Aligned_cols=179 Identities=15% Similarity=0.138 Sum_probs=128.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhH
Q 010212 294 LHLIGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAI 373 (515)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~ 373 (515)
+.+....+.++......+......|.+.++.++++.+.+. ......++..++.++.|++.||+|||+.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~------------~~~~~~~~~~~~~~~~G~l~Dr~g~r~~ 79 (405)
T TIGR00891 12 NAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAAS------------LISAALISRWFGALMFGLWGDRYGRRLP 79 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHH------------HHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 3455556666666667777777778887887777665332 5566677788889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHH
Q 010212 374 QLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIV 453 (515)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i 453 (515)
+..+..+..++.++..... +........++.+.......+...+++.|.+|+++|++++++.+....+|..+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~--------~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~ 151 (405)
T TIGR00891 80 MVTSIVLFSAGTLACGFAP--------GYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVV 151 (405)
T ss_pred HHHHHHHHHHHHHHHHHhc--------cHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHH
Confidence 9988888777776665433 22233333344444444445666788899999999999999999999999999
Q ss_pred HHHHHHHhhhccC--chHHHHHHHHHHHHHHHHHHhccccC
Q 010212 454 GAFGFLYLADTSG--VKKALLILGGANFLGMLFTFLVPESK 492 (515)
Q Consensus 454 ~~~~~~~l~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (515)
++.+.+.+.+..+ |+..+.+.++..++..+.....||++
T Consensus 152 ~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~ 192 (405)
T TIGR00891 152 AAQVYSLVVPVWGDGWRALFFISILPIIFALWLRKNIPEAE 192 (405)
T ss_pred HHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHhCCCCh
Confidence 9999999887665 88888776555555444433556543
No 141
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.41 E-value=1.1e-11 Score=122.89 Aligned_cols=183 Identities=15% Similarity=0.041 Sum_probs=122.9
Q ss_pred HHHHHHhHHHHHHhhhHHHHHHhh-hhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHH
Q 010212 25 IVIAGMGFFTDAYDLFCISLVTKL-LGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGM 103 (515)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~ 103 (515)
++.+++..+.............|. +.+++ |.+..+.++..+...++..++.+++|+++||+|||+.+..
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~----------g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~ 329 (467)
T PRK09556 260 IWLLCFANIFLYIVRIGIDNWSPVYAFQEL----------GFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVA 329 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHH
Confidence 334444444444444444555564 45667 8999999999999999999999999999999999988766
Q ss_pred HHHHHHHHHHHhh--hcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHH-HHHHHH
Q 010212 104 TLMMMVICSLASG--LSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGF-GILSGG 180 (515)
Q Consensus 104 ~~~~~~i~~~~~~--~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~-G~~~g~ 180 (515)
...+..++..+.. ...+ ...+.+.+++.|++.............|.+|+++||++.|+.+....+ |..++|
T Consensus 330 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~ 403 (467)
T PRK09556 330 CIALALIIFTLGVYQHATS------EYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAK 403 (467)
T ss_pred HHHHHHHHHHHHHHHhcCc------HHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHh
Confidence 5544444332222 2333 566778888888654333333346777999999999999999988886 778999
Q ss_pred HHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHH
Q 010212 181 MVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRM 234 (515)
Q Consensus 181 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~ 234 (515)
.+.+.+.+....+.+.. .....+|+..|++..+..++..+..+
T Consensus 404 ~~~G~i~~~~~~g~~~~-----------~~~~~~~~~~f~~~~~~~~~~~~~~~ 446 (467)
T PRK09556 404 VGLGMIADPTKNGTPIF-----------GYTLTGWAGTFAALDIAAIGCICLMA 446 (467)
T ss_pred hhHHHHhcccccccccc-----------cccccChHHHHHHHHHHHHHHHHHHH
Confidence 99998875110000000 01135699999887666666544443
No 142
>PRK10054 putative transporter; Provisional
Probab=99.40 E-value=7.9e-12 Score=120.86 Aligned_cols=175 Identities=13% Similarity=0.014 Sum_probs=120.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhHHHh-HhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHH
Q 010212 297 IGTTVTWFLLDVAYYSQNLFQKDIFT-AIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQL 375 (515)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~ 375 (515)
+.+....++.....+....+.+.+++ +.|+++.+.+. ......+..+++.+..|+++||+|||+.+.
T Consensus 10 ~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~------------~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~ 77 (395)
T PRK10054 10 SALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGY------------AMTIALTIGVVFSLGFGILADKFDKKRYML 77 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHhhcCcchhHH
Confidence 34444455555566666666666664 46776654322 445555667778889999999999999998
Q ss_pred HHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHH
Q 010212 376 MGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGA 455 (515)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~ 455 (515)
.+..+..++.+++.+.. +.+.......+. +.......+...++..|..|+++|+++.|+.+...++|..++|
T Consensus 78 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp 149 (395)
T PRK10054 78 LAITAFASGFIAIPLVN-------NVTLVVLFFALI-NCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGP 149 (395)
T ss_pred HHHHHHHHHHHHHHHHh-------HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHH
Confidence 88887777766665443 122222222222 2222233455677788999999999999999999999999999
Q ss_pred HHHHHhhhccCchHHHHHHHHHHHHHHHHHH-hccccC
Q 010212 456 FGFLYLADTSGVKKALLILGGANFLGMLFTF-LVPESK 492 (515)
Q Consensus 456 ~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~ 492 (515)
.+.+.+.+ .+|+..|.+.+++.+++.+... ++++.+
T Consensus 150 ~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~~~~~~~~ 186 (395)
T PRK10054 150 PLGTLLVM-QSINLPFWLAAICSAFPLVFIQIWVQRSE 186 (395)
T ss_pred HHHHHHHH-hccCcHHHHHHHHHHHHHHHHHHHHhccc
Confidence 99998875 6899999988877777655544 455443
No 143
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.40 E-value=7.7e-12 Score=120.65 Aligned_cols=145 Identities=15% Similarity=0.219 Sum_probs=120.0
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhcccc
Q 010212 64 TLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGG 143 (515)
Q Consensus 64 ~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 143 (515)
+.++.+.+++.+.......++.++.|++.||+|||+++..+.++..+..+...+.++ .+.+++.+++.|++.+.
T Consensus 231 g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~g~ 304 (375)
T TIGR00899 231 GLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNS------LWALLMLQLLNAIFIGI 304 (375)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHH
Confidence 888889999988888788889999999999999999988887776666555555555 67788889999998888
Q ss_pred ccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhH
Q 010212 144 DYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGA 223 (515)
Q Consensus 144 ~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~ 223 (515)
..+....++.|..|++ |+++.++++....+|..++|.+++.+.+. .||+..|++.+
T Consensus 305 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~g~~~~~-----------------------~g~~~~~~~~~ 360 (375)
T TIGR00899 305 LAGIGMLYFQDLMPGR-AGAATTLYTNTGRVGWIIAGSVGGILAER-----------------------WSYHAVYWFAI 360 (375)
T ss_pred HHHHHHHHHHHhCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHh-----------------------ccchhHHHHHH
Confidence 8888889999998764 67999999999999999999999998643 45999999988
Q ss_pred HHHHHHHHHHHhcCC
Q 010212 224 IPALLTYYWRMKMPE 238 (515)
Q Consensus 224 ~~~~~~~~~~~~~~e 238 (515)
+..++..+...+++|
T Consensus 361 ~~~~~~~~~~~~~~~ 375 (375)
T TIGR00899 361 VMLIVALFCLLLIKD 375 (375)
T ss_pred HHHHHHHHHHheecC
Confidence 877776666655544
No 144
>PRK12382 putative transporter; Provisional
Probab=99.39 E-value=1.9e-11 Score=118.48 Aligned_cols=135 Identities=18% Similarity=0.187 Sum_probs=117.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhh
Q 010212 70 ASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSA 149 (515)
Q Consensus 70 ~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~ 149 (515)
.++..+.+.++..+++++.|++.||+|||+.+..+..+.+++.++..+.++ .+.+++.+++.|++.+...+...
T Consensus 251 ~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~g~~~~~~~~~~~ 324 (392)
T PRK12382 251 AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPT------AWVALAGAALTGAGCSLIFPALG 324 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHccc------HHHHHHHHHHHHHHHHhHHHHHH
Confidence 456677788888999999999999999999999999999888888888777 67788899999999988888888
Q ss_pred HhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHH
Q 010212 150 TIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLT 229 (515)
Q Consensus 150 ~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~ 229 (515)
+.+.|.+|+++|+++.++.+....+|..++|.+.+.+.+. .||+..|.+.++..++.
T Consensus 325 ~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~-----------------------~g~~~~~~~~~~~~~~~ 381 (392)
T PRK12382 325 VEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATS-----------------------FGYPSVFLAGAISAVLG 381 (392)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------hCchHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999998643 45999999977777665
Q ss_pred HHHH
Q 010212 230 YYWR 233 (515)
Q Consensus 230 ~~~~ 233 (515)
.+..
T Consensus 382 ~~~~ 385 (392)
T PRK12382 382 IIVT 385 (392)
T ss_pred HHHH
Confidence 5544
No 145
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.39 E-value=8.9e-12 Score=122.99 Aligned_cols=175 Identities=11% Similarity=0.006 Sum_probs=126.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhHHHhH---hcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHh-hch
Q 010212 295 HLIGTTVTWFLLDVAYYSQNLFQKDIFTA---IGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDK-IGR 370 (515)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~ 370 (515)
.++.+.+..+.....+|....++|.++.+ .|+++.+ +........++..++.+++|+++|| +||
T Consensus 11 ~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~------------ag~~~~~~~~~~~~~~~~~G~laDr~~G~ 78 (475)
T TIGR00924 11 PLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQ------------AFIIFGAYSALVYLLTSVGWWFGDRVWGT 78 (475)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHH------------HHHHHHHHHHHHHHHHhhHHHHHHhhcch
Confidence 34555556666677888888888888765 4554433 2225566667788899999999999 899
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchhh---hhhhhHHHHHHh
Q 010212 371 FAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARL---RSTCHGISAASG 447 (515)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~---~~~~~g~~~~~~ 447 (515)
|+.+..+..+.+++.+++.... ......+...+.+.+.....+...++..|.+|++. |+++.++.+...
T Consensus 79 ~~~l~~~~~~~~~g~~~~~~~~--------~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~ 150 (475)
T TIGR00924 79 KKTMVLGGIVLMLGHFMLAMSI--------YPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSI 150 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHhcc--------cHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHH
Confidence 9999999999888887776532 12222222223333333345666778888887653 888999999999
Q ss_pred hhhHHHHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHHhcc
Q 010212 448 KAGAIVGAFGFLYLADTSGVKKALLILGGANFLGMLFTFLVP 489 (515)
Q Consensus 448 ~~g~~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 489 (515)
++|..++|.+.+.+.+..||+..|.+.++..+++.+...+.+
T Consensus 151 niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~~ 192 (475)
T TIGR00924 151 NIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAGR 192 (475)
T ss_pred HHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHcc
Confidence 999999999999999988999999888766666655444433
No 146
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=99.38 E-value=7.6e-12 Score=117.28 Aligned_cols=149 Identities=15% Similarity=0.160 Sum_probs=113.8
Q ss_pred HHHhHhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCC
Q 010212 319 DIFTAIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLP 398 (515)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (515)
-.+++.+-.+...+. ..+....+.++..++.+++++|+|+-+++..++.+..+=++.+....
T Consensus 396 WHled~~~~~~LfGv------------~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~------ 457 (618)
T KOG3762|consen 396 WHLEDLGGIKTLFGV------------VSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQ------ 457 (618)
T ss_pred HHHhhcCCcceeeee------------hhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhc------
Confidence 345566655555443 66777788999999999999999999999888887777777666554
Q ss_pred CchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHh-hhhHHHHHHHHHHhhhccCchHHHHHHHHH
Q 010212 399 DHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASG-KAGAIVGAFGFLYLADTSGVKKALLILGGA 477 (515)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~-~~g~~i~~~~~~~l~~~~g~~~~~~~~~~~ 477 (515)
++|.++-+=++.+......+....+|++...||+.++++.++..... .+|-.+|+++.|.+.+.+|-+..|..+++.
T Consensus 458 --n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giA 535 (618)
T KOG3762|consen 458 --NPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIA 535 (618)
T ss_pred --CchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHH
Confidence 33444444444444444455667789999999999999999997665 579999999999999999999999998888
Q ss_pred HHHHHHHHHh
Q 010212 478 NFLGMLFTFL 487 (515)
Q Consensus 478 ~~~~~~~~~~ 487 (515)
|++..+....
T Consensus 536 cl~~l~~~~~ 545 (618)
T KOG3762|consen 536 CLVTLALFIS 545 (618)
T ss_pred HHHHHHHHHH
Confidence 8777666553
No 147
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.38 E-value=1.9e-11 Score=118.26 Aligned_cols=164 Identities=11% Similarity=0.063 Sum_probs=124.6
Q ss_pred hHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhcC
Q 010212 40 FCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLSF 119 (515)
Q Consensus 40 ~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~ 119 (515)
.......|.+.++. +.+..+.+...+.+.++..++.++.|++.||+|||+.+..+..+..++.++....+
T Consensus 222 ~~~~~~lp~~l~~~----------g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~ 291 (393)
T PRK09705 222 ASLIAWLPAFYIEI----------GASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLP 291 (393)
T ss_pred HHHHHHHHHHHHHc----------CCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHcc
Confidence 33444556665667 89999999999999999999999999999999999999888888777776555433
Q ss_pred CCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccc-cccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCc
Q 010212 120 GKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYAN-KKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFPAPI 198 (515)
Q Consensus 120 ~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~-~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~~~~ 198 (515)
.. ...+. -++.|++.+...+.......+..+ +++|++..++.+....++..++|.+.+++.+..++
T Consensus 292 ~~-----~~~~~--~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~------ 358 (393)
T PRK09705 292 LQ-----LPVLW--AMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGN------ 358 (393)
T ss_pred ch-----HHHHH--HHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC------
Confidence 31 12222 245688888877877777777775 67899999999999999999999999999876553
Q ss_pred cCCCCCCccccCCCchHHHHHHHhHHHHHHHHH-HHHhcCCchhh
Q 010212 199 YSANPAASTVPEADYIWRIILMFGAIPALLTYY-WRMKMPETARY 242 (515)
Q Consensus 199 ~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~-~~~~~~e~p~~ 242 (515)
|...|++.++.+++..+ ...+.||++..
T Consensus 359 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (393)
T PRK09705 359 ----------------YLMDWAFHALCVVGLMIITLRFAPARFPQ 387 (393)
T ss_pred ----------------chHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 88888886666655443 35567776543
No 148
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.38 E-value=1.4e-11 Score=119.76 Aligned_cols=174 Identities=11% Similarity=0.062 Sum_probs=119.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhHHHhH-hcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhh-chhh
Q 010212 295 HLIGTTVTWFLLDVAYYSQNLFQKDIFTA-IGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKI-GRFA 372 (515)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~ 372 (515)
.++............+|+...+.|.++.+ .|+++.. +............++.+++|+++||+ |||+
T Consensus 10 ~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~------------a~~i~~~~~~~~~l~~ligG~LaDRilGrrr 77 (493)
T PRK15462 10 AIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNH------------AYELFSAYCSLVYVTPILGGFLADKVLGNRM 77 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHccCcHH
Confidence 34444555555667888888888888765 4554433 22245555566677888999999999 9999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchh--hhhhhhHHHHHHhhhh
Q 010212 373 IQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPAR--LRSTCHGISAASGKAG 450 (515)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~g~~~~~~~~g 450 (515)
.+..+.++..++.+++.... ...........+.. .......+...+++.|.+|++ .|.++.++.....++|
T Consensus 78 ~iliG~il~~lg~lll~~~~------~~~~~~~l~l~li~-iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG 150 (493)
T PRK15462 78 AVMLGALLMAIGHVVLGASE------IHPSFLYLSLAIIV-CGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVG 150 (493)
T ss_pred HHHHHHHHHHHHHHHHHHhh------cchhHHHHHHHHHH-HhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHH
Confidence 99999988888876554321 01111111111111 222223355567889999875 6999999999999999
Q ss_pred HHHHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHHh
Q 010212 451 AIVGAFGFLYLADTSGVKKALLILGGANFLGMLFTFL 487 (515)
Q Consensus 451 ~~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 487 (515)
+.++|.+.+++.+..||+..|.+.++..+++.+..++
T Consensus 151 ~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~~~ 187 (493)
T PRK15462 151 SIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLC 187 (493)
T ss_pred HHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998876655555554443
No 149
>PRK10504 putative transporter; Provisional
Probab=99.38 E-value=1.3e-11 Score=122.88 Aligned_cols=172 Identities=13% Similarity=0.062 Sum_probs=126.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHH
Q 010212 295 HLIGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQ 374 (515)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~ 374 (515)
.++...+..++.....+......|.+.++.|+++.+.+. ......++..++.++.|+++||+|||+.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~------------~~~~~~~~~~~~~~~~g~l~d~~g~r~~~ 78 (471)
T PRK10504 11 QLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHM------------VIVSYVLTVAVMLPASGWLADRVGVRNIF 78 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhchHHHH
Confidence 345555566666666667777889998888776544221 44555667777888999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHH
Q 010212 375 LMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVG 454 (515)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~ 454 (515)
..+..+..++.++..... +.....+..++.+.+.....+...+++.|.+|+++|+++.|+.+...++|..++
T Consensus 79 ~~~~~~~~~~~~~~~~~~--------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g 150 (471)
T PRK10504 79 FTAIVLFTLGSLFCALSG--------TLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLG 150 (471)
T ss_pred HHHHHHHHHHHHHHHHhC--------CHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhh
Confidence 888777777666544322 222233333334444433456677788999999999999999999999999999
Q ss_pred HHHHHHhhhccCchHHHHHHHHHHHHHHHHHH
Q 010212 455 AFGFLYLADTSGVKKALLILGGANFLGMLFTF 486 (515)
Q Consensus 455 ~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 486 (515)
|.+.+.+.+..||+..|.+...+..++.+...
T Consensus 151 ~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~ 182 (471)
T PRK10504 151 PALGGLLVEYASWHWIFLINIPVGIIGAIATL 182 (471)
T ss_pred hHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988777776666655
No 150
>TIGR00895 2A0115 benzoate transport.
Probab=99.38 E-value=6.9e-12 Score=122.01 Aligned_cols=173 Identities=21% Similarity=0.223 Sum_probs=123.4
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHH
Q 010212 299 TTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGF 378 (515)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~ 378 (515)
.....+.............|.+.++.++++.+.+ .......++.+++.++.|+++||+|||+.+..+.
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~ 89 (398)
T TIGR00895 22 SFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLG------------FLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSI 89 (398)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHH------------HHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHH
Confidence 3334444444455566677777777666544322 2455566777888899999999999999999888
Q ss_pred HHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHH
Q 010212 379 FFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGF 458 (515)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~ 458 (515)
.+..++.++..... +.....+..+..++......+...++..|.+|++.|++++++......+|..+++.+.
T Consensus 90 ~~~~~~~~~~~~~~--------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 161 (398)
T TIGR00895 90 LLFSVFTLLCALAT--------NVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLA 161 (398)
T ss_pred HHHHHHHHHHHHcc--------chHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHH
Confidence 88777776655432 2223333334444444445677788899999999999999999999999999999999
Q ss_pred HHhhhccCchHHHHHHHHHHHHHHHHHH-hcccc
Q 010212 459 LYLADTSGVKKALLILGGANFLGMLFTF-LVPES 491 (515)
Q Consensus 459 ~~l~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~ 491 (515)
+.+.+..||+..+.+.+++.++..++.+ +++++
T Consensus 162 ~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (398)
T TIGR00895 162 GWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPES 195 (398)
T ss_pred HHHhhcccceeehhhhhhHHHHHHHHHHHhCCCC
Confidence 9999989999988887655555554444 55654
No 151
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.38 E-value=8.5e-12 Score=122.01 Aligned_cols=159 Identities=12% Similarity=0.033 Sum_probs=129.4
Q ss_pred HHHHhhhhhh-hhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhcCCC
Q 010212 43 SLVTKLLGRI-YYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLSFGK 121 (515)
Q Consensus 43 ~~~~~~i~~~-~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~ 121 (515)
....|.+.++ + |.+..+.+++.+...++..++.++.+++.||.++|+.+..+..+.+++.++..+.++
T Consensus 243 ~~~~p~~~~~~~----------g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~- 311 (417)
T PRK10489 243 RVLYPALADEVW----------QMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPM- 311 (417)
T ss_pred HHhhHHHHHhcc----------CCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccch-
Confidence 3445655555 6 888899999999999999999999999999988888888888888888887777776
Q ss_pred CchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccCC
Q 010212 122 EPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFPAPIYSA 201 (515)
Q Consensus 122 ~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~~~~~~~ 201 (515)
++...++.++.|++.+...+...+++.|..|++.|+++.+++.....+|..+|+.+.+.+.+..
T Consensus 312 -----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~----------- 375 (417)
T PRK10489 312 -----WILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMM----------- 375 (417)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHh-----------
Confidence 6777888999999888777778899999999999999999999999999999999999997543
Q ss_pred CCCCccccCCCchHHHHHHHhHHH-HHHHHHHHHhcCCch
Q 010212 202 NPAASTVPEADYIWRIILMFGAIP-ALLTYYWRMKMPETA 240 (515)
Q Consensus 202 ~~~~~~~~~~~~~wr~~f~~~~~~-~~~~~~~~~~~~e~p 240 (515)
|++..+++.+.. .++..+....++|.+
T Consensus 376 ------------g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (417)
T PRK10489 376 ------------TPVASASASGFGLLIIGVLLLLVLGELR 403 (417)
T ss_pred ------------chhhHHHHHHHHHHHHHHHHHHhccccc
Confidence 477777765444 344555556666653
No 152
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.38 E-value=1.8e-10 Score=107.36 Aligned_cols=151 Identities=12% Similarity=0.090 Sum_probs=128.2
Q ss_pred CCchhHHH-HHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccc
Q 010212 64 TLPDNVAS-AVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIG 142 (515)
Q Consensus 64 ~~s~~~~g-~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g 142 (515)
|++..|+. -+.-...-.+....++...+.|..|.|++++++.+...+..++..+.++ ...+-+..++-|++.+
T Consensus 36 n~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~s------v~~mq~~q~~yg~~~a 109 (412)
T PF01770_consen 36 NFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTS------VLAMQLMQFFYGLATA 109 (412)
T ss_pred CCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCc------HHHHHHHHHHHHHHHH
Confidence 78877765 5666777788889999999999999999999999999999999999999 8999999999999877
Q ss_pred cccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHh
Q 010212 143 GDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFG 222 (515)
Q Consensus 143 ~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~ 222 (515)
. ..+-.+++-...|+++-.++.+...+..-+|..++.++|-.+... +....+...++.
T Consensus 110 ~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~---------------------~~~sy~~L~~is 167 (412)
T PF01770_consen 110 A-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSF---------------------GGVSYFQLNYIS 167 (412)
T ss_pred H-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------------------cCCCHHHHHHHH
Confidence 6 688889999999999989999999999999999999999887643 234478887887
Q ss_pred HHHHHHHHHHHHhcCCchhh
Q 010212 223 AIPALLTYYWRMKMPETARY 242 (515)
Q Consensus 223 ~~~~~~~~~~~~~~~e~p~~ 242 (515)
.....+++++.+++|..++.
T Consensus 168 l~~~~~a~~~~~fLP~~~~S 187 (412)
T PF01770_consen 168 LASVSLALLIALFLPMPKRS 187 (412)
T ss_pred HHHHHHHHHHHHHcCCCCcc
Confidence 77667777777888887654
No 153
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.37 E-value=8.2e-12 Score=119.30 Aligned_cols=163 Identities=17% Similarity=0.181 Sum_probs=120.0
Q ss_pred HHHHHHhhhhh-HHHhHhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHH
Q 010212 308 VAYYSQNLFQK-DIFTAIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMF 386 (515)
Q Consensus 308 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~ 386 (515)
..........| .+.++.+.++.+.+. ......++..++.++.|+++||+|||+.+..+..+.+++..
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~s~~~~~~------------~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~ 77 (352)
T PF07690_consen 10 FGFSIISPALPLYLAEELGLSPSQIGL------------LFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSL 77 (352)
T ss_dssp HHHHHHHHHHH-HHHCCSTTTSHCHHH------------HHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHH
Confidence 34444444555 555566766665333 55566677888899999999999999999999888888844
Q ss_pred HHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccC
Q 010212 387 ALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSG 466 (515)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g 466 (515)
+..+.. +.+ ...+..++.+.+.....+....++.|.+|+++|++++++.+....+|..++|.+.+.+.+..+
T Consensus 78 ~~~~~~-------~~~-~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~ 149 (352)
T PF07690_consen 78 LLAFAS-------NFW-LLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFG 149 (352)
T ss_dssp HHHHHC-------CHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCH
T ss_pred Hhhhhh-------hHH-HHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccc
Confidence 444321 233 444444444455444567788899999999999999999999999999999999999998889
Q ss_pred chHHHHHHHHHHHHHHHHHH-hccc
Q 010212 467 VKKALLILGGANFLGMLFTF-LVPE 490 (515)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~-~~~~ 490 (515)
|+..+++.+++.++..++.. +.++
T Consensus 150 ~~~~~~~~~~~~~~~~il~~~~~~~ 174 (352)
T PF07690_consen 150 WRWAFLISAILSLIAAILFILFLPE 174 (352)
T ss_dssp HCCHHHHHHHHHHHHHHHHHCCC--
T ss_pred cccccccccchhhhhhhhHhhhhhh
Confidence 99999999998888877543 4433
No 154
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.37 E-value=1.7e-11 Score=113.60 Aligned_cols=176 Identities=14% Similarity=0.107 Sum_probs=147.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhH
Q 010212 294 LHLIGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAI 373 (515)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~ 373 (515)
..++.+.+..|......+...-.+|.+-++.+.+....+. ....+..+..++.++...+.||+.||++
T Consensus 13 ~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~------------lis~yAl~~ai~ap~l~~lt~r~~Rr~l 80 (394)
T COG2814 13 LALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQ------------LITAYALGVALGAPLLALLTGRLERRRL 80 (394)
T ss_pred HHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHcccchHHH
Confidence 3566777777888888899999999999998877665333 7777888888899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHH
Q 010212 374 QLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIV 453 (515)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i 453 (515)
++....+..++.++..+.. ++....+.=+..+.....++++..+++.++.|+++|+++++++.....+...+
T Consensus 81 Ll~~l~lFi~~n~l~alAp--------~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~ 152 (394)
T COG2814 81 LLGLLALFIVSNLLSALAP--------SFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVL 152 (394)
T ss_pred HHHHHHHHHHHHHHHHHhc--------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHH
Confidence 9999999999988887765 34444444444455555566788889999999999999999999999999999
Q ss_pred HHHHHHHhhhccCchHHHHHHHHHHHHHHHHHH-hcc
Q 010212 454 GAFGFLYLADTSGVKKALLILGGANFLGMLFTF-LVP 489 (515)
Q Consensus 454 ~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-~~~ 489 (515)
|..+..++-|..||+.+|...+++.+++.+..+ .+|
T Consensus 153 GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 153 GVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred hccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999888777 677
No 155
>PRK03545 putative arabinose transporter; Provisional
Probab=99.37 E-value=3.2e-11 Score=116.78 Aligned_cols=139 Identities=18% Similarity=0.193 Sum_probs=112.3
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHH-HhhhcCCCCchhHHHHHHHHHHHhhhccc
Q 010212 64 TLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSL-ASGLSFGKEPKAVMITLCFFRFWLGFGIG 142 (515)
Q Consensus 64 ~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~-~~~~~~~~~~~~~~~~l~~~r~l~G~~~g 142 (515)
|.+..+.+++.+...++..+++++.|+++||+|||+... +..+..++.. +....++ .+.++++.++.|++.+
T Consensus 237 g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~-~~~~~~~~~~~l~~~~~~------~~~~~~~~~l~g~~~~ 309 (390)
T PRK03545 237 GLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLI-AIALLLVCLLLLLPAANS------EWHLSVLSIFWGIAIM 309 (390)
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH-HHHHHHHHHHHHHHHhch------HHHHHHHHHHHHHHHh
Confidence 888889999999999999999999999999999887544 4444444433 3344555 6788889999999887
Q ss_pred cccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHh
Q 010212 143 GDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFG 222 (515)
Q Consensus 143 ~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~ 222 (515)
...+...+.+.|..| ++|+++++++.....+|..+|+++++.+. +..|++..|++.
T Consensus 310 ~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~-----------------------~~~g~~~~~~~~ 365 (390)
T PRK03545 310 CIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVS-----------------------LHLGLSSIGYVG 365 (390)
T ss_pred cchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------hccChhHHHHHH
Confidence 777778888888876 57899999999999999999999999996 456699999998
Q ss_pred HHHHHHHHHHH
Q 010212 223 AIPALLTYYWR 233 (515)
Q Consensus 223 ~~~~~~~~~~~ 233 (515)
++..++..+..
T Consensus 366 ~~~~~~~~~~~ 376 (390)
T PRK03545 366 AALALAALVWS 376 (390)
T ss_pred HHHHHHHHHHH
Confidence 77777655544
No 156
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.37 E-value=2.5e-11 Score=121.02 Aligned_cols=177 Identities=15% Similarity=0.046 Sum_probs=125.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHH
Q 010212 295 HLIGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQ 374 (515)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~ 374 (515)
.+..+.+..+....-......-.|.+.++.+.++.+.+. ....+.++.....+..|+++||+|||+.+
T Consensus 7 ~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~------------~~~~~~l~~~~~~~~~G~l~D~~Grk~~l 74 (495)
T PRK14995 7 TLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLW------------IIDIYSLVMAGMVLPMGALGDRIGFKRLL 74 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHH------------HHHHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 445555566666566666777788888887766554322 44455556666777899999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCcccccccccccc-CchhhhhhhhHHHHHHhhhhHHH
Q 010212 375 LMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEI-FPARLRSTCHGISAASGKAGAIV 453 (515)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~g~~~~~~~~g~~i 453 (515)
..+..+..++.++..... +...+++.-.+.+.+.....+.....+.+. .|+++|++++|+......+|..+
T Consensus 75 ~~~~~~~~~~~~~~~~a~--------~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~ 146 (495)
T PRK14995 75 MLGGTLFGLASLAAAFSP--------TASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAF 146 (495)
T ss_pred HHHHHHHHHHHHHHHHcC--------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999998888887776543 222333332333333333344444445455 47799999999999999999999
Q ss_pred HHHHHHHhhhccCchHHHHHHHHHHHHHHHHHH-hcccc
Q 010212 454 GAFGFLYLADTSGVKKALLILGGANFLGMLFTF-LVPES 491 (515)
Q Consensus 454 ~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~ 491 (515)
+|.+.+.+.+..||++.|++...++++..++.. ++|+.
T Consensus 147 gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~ 185 (495)
T PRK14995 147 GPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQ 185 (495)
T ss_pred HHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999988777777666555 55554
No 157
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.37 E-value=1.2e-11 Score=123.70 Aligned_cols=174 Identities=12% Similarity=0.085 Sum_probs=129.6
Q ss_pred HHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHH
Q 010212 298 GTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMG 377 (515)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~ 377 (515)
...+..+.............|.+.++.|.++.+.+. ......++..++.++.|++.||+|||+.+..+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~------------~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~ 73 (485)
T TIGR00711 6 VLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQW------------VITSYMLANAISIPLTGWLAKRFGTRRLFLIS 73 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhH------------HHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHH
Confidence 334444444455555666788888887776655333 55667778888899999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHH
Q 010212 378 FFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFG 457 (515)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~ 457 (515)
..+..++.++..... +.....+..+..+.+.....+...+++.|.+|+++|+++.++......+|..++|.+
T Consensus 74 ~~~~~~~~~~~~~~~--------~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 145 (485)
T TIGR00711 74 TFAFTLGSLLCGVAP--------NLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTL 145 (485)
T ss_pred HHHHHHHHHHHhCcC--------CHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhcc
Confidence 888888777665432 233333344444444444566777889999999999999999999999999999999
Q ss_pred HHHhhhccCchHHHHHHHHHHHHHHHHHH-hcccc
Q 010212 458 FLYLADTSGVKKALLILGGANFLGMLFTF-LVPES 491 (515)
Q Consensus 458 ~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~ 491 (515)
.+.+.+..+|+..|++.+.+.++..++.. ..+++
T Consensus 146 ~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~ 180 (485)
T TIGR00711 146 GGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRD 180 (485)
T ss_pred HhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCc
Confidence 99999999999999888777766665555 45544
No 158
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.37 E-value=3.5e-11 Score=116.04 Aligned_cols=131 Identities=7% Similarity=-0.102 Sum_probs=117.6
Q ss_pred HHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhcCCC
Q 010212 42 ISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLSFGK 121 (515)
Q Consensus 42 ~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~ 121 (515)
.....|...++. |.++.+.|.+.+...++..++.++.+++.||+|+|+.+.++.++..+..++.+++++
T Consensus 224 ~~~~~~~~l~~~----------g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~- 292 (382)
T TIGR00902 224 YYGFSAIYWQAA----------GISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEA- 292 (382)
T ss_pred HHHHHHHHHHHC----------CCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhh-
Confidence 334445555677 999999999999999999999999999999999999999999999999999999888
Q ss_pred CchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHH-HHHHHHHHHHHHHHHHHHHh
Q 010212 122 EPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVF-AMQGFGILSGGMVAIIVSAA 189 (515)
Q Consensus 122 ~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~-~~~~~G~~~g~~l~~~l~~~ 189 (515)
++.+++.++++|+..+...+....++.+. |+++|++..++++ ...++|..+|+.++|.+.+.
T Consensus 293 -----~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~ 355 (382)
T TIGR00902 293 -----FPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPT 355 (382)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 88999999999999999999999999998 9999999999976 57789999999999999744
No 159
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.36 E-value=1.4e-09 Score=103.25 Aligned_cols=343 Identities=13% Similarity=0.072 Sum_probs=191.6
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhh
Q 010212 74 NGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMS 153 (515)
Q Consensus 74 ~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~ 153 (515)
.++-+....+++++.+.+.|+.|.|+.+.++......-.+..-+-+. +.++++-.+.|+|.+..+...-.+++
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~N~-------y~~yfssallG~Gaallw~GqG~ylt 128 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFPNS-------YYLYFSSALLGFGAALLWTGQGGYLT 128 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhcch-------HHHHHHHHHhhhhHHheecccceehh
Confidence 78888889999999999999999999999999999988888877766 78899999999999999999999999
Q ss_pred hccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHH
Q 010212 154 EYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWR 233 (515)
Q Consensus 154 e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~ 233 (515)
|..+++.+.+..++.......+.++|.++-..+.............+.+-.. ++...+..-+..+.+...+.++..+..
T Consensus 129 ~~st~~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~v~~~~~~l~~i~~ 207 (461)
T KOG3098|consen 129 SNSTRETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVF-EVLFIDFEIKVLFGVLLAISVLSIINF 207 (461)
T ss_pred hcCChhhHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhc-chhhhhHHHHHHHHHHHHHHHHHhhhe
Confidence 9999999999999999999999888877766554332211000000000000 000000111111111111222222222
Q ss_pred HhcCCchhhHHHHhccHHHHHHHHHHHHHhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 010212 234 MKMPETARYTALVAKNAKQAAADMSKVLQVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQ 313 (515)
Q Consensus 234 ~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (515)
.+.|.+.... .++.. ++ ...+..+..++....++ ++.+...++..+...
T Consensus 208 ~~~p~~~~~~-~~~~~-~~----------------------~~~~~l~~~~~l~~~~~----ml~L~~~f~~tG~~~--- 256 (461)
T KOG3098|consen 208 DFLPSKDVVN-CKSSS-ET----------------------SFSELLKLTFKLLKTPK----MLLLFPFFFYTGLET--- 256 (461)
T ss_pred eecCccchhh-hhhhc-cc----------------------cHHHHHHHHHHHhcCHh----HHHHHHHHHHHHHHH---
Confidence 3333221100 00000 00 00000111111111111 222222222111111
Q ss_pred hhhhhHHHhHhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHh---hchhhHHHHHHHHHHHHHHHHHh
Q 010212 314 NLFQKDIFTAIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDK---IGRFAIQLMGFFFMTVFMFALAI 390 (515)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~---~g~~~~~~~~~~~~~~~~~~~~~ 390 (515)
..|...+-.....+.. ...+....-.+.....+++.+.+....+.+.+| +||++.+.++..+..+..++.-.
T Consensus 257 Sf~~~iypt~i~ft~~-----~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l 331 (461)
T KOG3098|consen 257 SFWISIYPTCISFTRK-----LGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHL 331 (461)
T ss_pred HHHHhccchhhhhhhh-----ccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhc
Confidence 1111111111111100 001111123335556666777777777777766 57788877777776666666554
Q ss_pred hhhccc---C-CC------chHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHH
Q 010212 391 PYHHWT---L-PD------HRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLY 460 (515)
Q Consensus 391 ~~~~~~---~-~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~ 460 (515)
...... . +. .......+.....+..-....+..+.++.+.+| +.|..+.++...-..+...++-...+.
T Consensus 332 ~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~~-~~~~~~fsi~kfyq~~~s~v~~f~~~~ 410 (461)
T KOG3098|consen 332 SFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLYP-DDRAQAFSLFKFYQSVASCVAFFFSPY 410 (461)
T ss_pred cccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 332111 0 00 123344555566666666677788888888884 778888888888888777776666554
Q ss_pred h
Q 010212 461 L 461 (515)
Q Consensus 461 l 461 (515)
.
T Consensus 411 ~ 411 (461)
T KOG3098|consen 411 L 411 (461)
T ss_pred h
Confidence 4
No 160
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.36 E-value=2.9e-11 Score=118.78 Aligned_cols=161 Identities=14% Similarity=0.090 Sum_probs=117.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHH
Q 010212 296 LIGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQL 375 (515)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~ 375 (515)
+....+.++......+......|.+.++.++++.+.+ .......++..++.++.|+++||+|||+.+.
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~------------~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~ 87 (426)
T PRK12307 20 LFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGA------------FLATAAFIGRPFGGALFGLLADKFGRKPLMM 87 (426)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHhCChHHHH
Confidence 3444444555555555666666777777777654422 2555667778888999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHH
Q 010212 376 MGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGA 455 (515)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~ 455 (515)
.+..+.+++.++..... +.....+.-.+.+.......+....++.|.+|+++|+++.++......+|..+++
T Consensus 88 ~~~~~~~~~~~~~~~~~--------~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~ 159 (426)
T PRK12307 88 WSIVAYSVGTGLSGLAS--------GVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAA 159 (426)
T ss_pred HHHHHHHHHHHHHHHHh--------HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHH
Confidence 99998888887766543 2223333333333333344566677889999999999999999999999999999
Q ss_pred HHHHHhhhccCchHHHHHHHH
Q 010212 456 FGFLYLADTSGVKKALLILGG 476 (515)
Q Consensus 456 ~~~~~l~~~~g~~~~~~~~~~ 476 (515)
.+.+.+.+..+|+..+++...
T Consensus 160 ~l~~~l~~~~~w~~~f~i~~~ 180 (426)
T PRK12307 160 YFMPSFAEAYGWRAAFFVGLL 180 (426)
T ss_pred HHHHHHcccCCHHHHHHHHHH
Confidence 999999888899998876443
No 161
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.36 E-value=1e-11 Score=120.65 Aligned_cols=161 Identities=14% Similarity=0.062 Sum_probs=120.0
Q ss_pred HHHhhhhhHHHhHhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHh
Q 010212 311 YSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAI 390 (515)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~ 390 (515)
.......|.+.++.|+++.+.+. ......++..++.++.|++.||+|||+.+..+..+..++..+...
T Consensus 11 ~~~~~~~~~~~~~~g~s~~~~~~------------~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~ 78 (399)
T TIGR00893 11 ANLSFAAPMLQEDLGLSAAQYGY------------VFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAF 78 (399)
T ss_pred HhhhHhHHHHHHhhCCChhhHHH------------HHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHH
Confidence 34444556666667766554332 566677788888999999999999999999888887777776655
Q ss_pred hhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCchHH
Q 010212 391 PYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSGVKKA 470 (515)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~~~ 470 (515)
.. +.....+..++.+.+.....+....++.|.+|+++|++++++......+|..+++.+.+.+.+..+|+..
T Consensus 79 ~~--------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~ 150 (399)
T TIGR00893 79 AG--------AYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWA 150 (399)
T ss_pred Hc--------CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHH
Confidence 43 2233333333444444445667778899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH-hcccc
Q 010212 471 LLILGGANFLGMLFTF-LVPES 491 (515)
Q Consensus 471 ~~~~~~~~~~~~~~~~-~~~~~ 491 (515)
+.+.+++.++..+..+ ..+++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~ 172 (399)
T TIGR00893 151 FIIEGVLGIIWGVLWLKFIPDP 172 (399)
T ss_pred HHHHHHHHHHHHHHhhheecCC
Confidence 9988877776666555 44443
No 162
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.35 E-value=3e-11 Score=117.14 Aligned_cols=169 Identities=8% Similarity=0.032 Sum_probs=119.1
Q ss_pred HHHHHHHHHhhhhhHHHhHhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHH
Q 010212 305 LLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVF 384 (515)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~ 384 (515)
.............|.+.++.+.++.+.+ .......++..++.++.|+++||+|||+.+..+..+..++
T Consensus 14 ~~~~~~~~~~~~lp~~~~~~~~s~~~~~------------~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~ 81 (392)
T PRK10473 14 LYPAGIDMYLVGLPRIAADLNASEAQLH------------IAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIA 81 (392)
T ss_pred HHHHHHHHHhhhHHHHHHHhCCCHHHHH------------HHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHH
Confidence 3334444444567777777666544322 2455566777788889999999999999999888887777
Q ss_pred HHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhc
Q 010212 385 MFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADT 464 (515)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~ 464 (515)
..+..... +........+..+.......+...+++.|.+|+++|+++.++.+....++..++|.+.+.+.+.
T Consensus 82 ~~~~~~~~--------~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~ 153 (392)
T PRK10473 82 SLLCSLAE--------TSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLK 153 (392)
T ss_pred HHHHHHhC--------cHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 76665432 1222222222333333333455677889999999999999999999999999999999998888
Q ss_pred cCchHHHHHHHHHHHHHHHHHH-hccccCC
Q 010212 465 SGVKKALLILGGANFLGMLFTF-LVPESKG 493 (515)
Q Consensus 465 ~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 493 (515)
.+|+..+++.+++.++..++.+ ..+|+++
T Consensus 154 ~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 183 (392)
T PRK10473 154 FPWQSLFYTMAAMGILVLLLSLFILKETRP 183 (392)
T ss_pred cChHHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 8999999888877777666554 5566543
No 163
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.35 E-value=2.6e-11 Score=120.07 Aligned_cols=174 Identities=10% Similarity=0.061 Sum_probs=114.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHH
Q 010212 296 LIGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQL 375 (515)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~ 375 (515)
+......++......+....+.|.+.++.|++..+.+. ......++..++.++.|+++||+|||+.+.
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~------------~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~ 105 (476)
T PLN00028 38 FHLSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSDIGN------------AGIASVSGSIFSRLAMGPVCDLYGPRYGSA 105 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhCChHHHH
Confidence 33333344444444555666677777777776544221 345566677888899999999999999998
Q ss_pred HHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHH
Q 010212 376 MGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGA 455 (515)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~ 455 (515)
.+.++.+++.++..... +.. .+.+..++.++...... ....++.|.+|++.|++++|+.+...++|..+++
T Consensus 106 ~~~~~~~~~~~~~~~~~-------s~~-~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~ 176 (476)
T PLN00028 106 FLLMLTAPAVFCMSLVS-------SAT-GFIAVRFFIGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQ 176 (476)
T ss_pred HHHHHHHHHHHHHHHhc-------CHH-HHHHHHHHHHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHH
Confidence 88877777766655433 122 22222222222222222 2335678999999999999999988888888887
Q ss_pred HHHHHhhh---------ccCchHHHHHHHHHHHHHHHHHHhccc
Q 010212 456 FGFLYLAD---------TSGVKKALLILGGANFLGMLFTFLVPE 490 (515)
Q Consensus 456 ~~~~~l~~---------~~g~~~~~~~~~~~~~~~~~~~~~~~~ 490 (515)
.+.+.+.+ ..||+..|++.+++.++..+..+++++
T Consensus 177 ~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~ 220 (476)
T PLN00028 177 LLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLGQ 220 (476)
T ss_pred HHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHcC
Confidence 76665432 248999999988888777666664443
No 164
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.35 E-value=5.7e-11 Score=114.60 Aligned_cols=148 Identities=17% Similarity=0.155 Sum_probs=119.1
Q ss_pred HHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhcCCCCc
Q 010212 44 LVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLSFGKEP 123 (515)
Q Consensus 44 ~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~ 123 (515)
..+|...++. +.+.++.+++.+...++..+++++.|++.||+|||+++..+..+..++.+... ..
T Consensus 221 ~~lp~~~~~~----------g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~~--- 285 (381)
T PRK03633 221 GLMPLYLNHQ----------GMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--SQ--- 285 (381)
T ss_pred HHHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--hh---
Confidence 3456666666 88888999999999999999999999999999999999888888877665443 22
Q ss_pred hhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccCCCC
Q 010212 124 KAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFPAPIYSANP 203 (515)
Q Consensus 124 ~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~~~~~~~~~ 203 (515)
......+++.|++.....|...+++.|..|+++++...+......++|.++||.+++.+.+.
T Consensus 286 ----~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~-------------- 347 (381)
T PRK03633 286 ----AAMAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQN-------------- 347 (381)
T ss_pred ----HHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------
Confidence 33445777888877777899999999999988888888888888999999999999999644
Q ss_pred CCccccCCCchHHHHHHHhHHHHHHHHHHH
Q 010212 204 AASTVPEADYIWRIILMFGAIPALLTYYWR 233 (515)
Q Consensus 204 ~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~ 233 (515)
.+|++.|.+.+...++..+..
T Consensus 348 ---------~g~~~~f~~~~~~~l~~~~~~ 368 (381)
T PRK03633 348 ---------YSDNLLFIMIASVSFIYLLML 368 (381)
T ss_pred ---------hCccHHHHHHHHHHHHHHHHH
Confidence 448899888776666554443
No 165
>PRK03699 putative transporter; Provisional
Probab=99.34 E-value=2.4e-11 Score=117.71 Aligned_cols=162 Identities=9% Similarity=0.032 Sum_probs=125.8
Q ss_pred HhhhHHHHHHhhhh-hhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHh
Q 010212 37 YDLFCISLVTKLLG-RIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLAS 115 (515)
Q Consensus 37 ~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~ 115 (515)
.....+....|.+. +++ +.+..+.+++.+.+.++..++.++.|+++||+|||+.+.....+..+...+.
T Consensus 219 ~~~~~~~~~~p~~l~~~~----------g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~ 288 (394)
T PRK03699 219 LAQLTFISWVPEYAQKKF----------GMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLF 288 (394)
T ss_pred HHHHHHHHHHHHHHHHHc----------CCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHH
Confidence 33334444555554 567 8999999999999999999999999999999999999888887777776666
Q ss_pred hhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 010212 116 GLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFP 195 (515)
Q Consensus 116 ~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~ 195 (515)
...++ .+.+.+..++.|++.+...+...++..|..|. ++++..+.......+|..++|.+.+.+.+.
T Consensus 289 ~~~~~------~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~------ 355 (394)
T PRK03699 289 VNTDD------PSHLLYAILGLGFFSSAIYTTIITLGSQQTKV-ASPKLVNFILTCGTIGTMLTFVVTSPIVAH------ 355 (394)
T ss_pred HHcCC------chHHHHHHHHHHHHHHHHHHHHHHHHHHHccC-CCHHHHHHHHHhhhHHHHHHHHHHHHHHHH------
Confidence 66666 45666778889988887788888888887764 467788888888899999999999999644
Q ss_pred CCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhcCC
Q 010212 196 APIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKMPE 238 (515)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e 238 (515)
.||+..+++.++..++..+....+++
T Consensus 356 -----------------~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (394)
T PRK03699 356 -----------------FGLQAALLTANGLYAVVFVMCILLGF 381 (394)
T ss_pred -----------------hCchhhhhhhHHHHHHHHHHHHHHHH
Confidence 44888988876666665554444443
No 166
>PRK09952 shikimate transporter; Provisional
Probab=99.34 E-value=8.1e-11 Score=115.54 Aligned_cols=150 Identities=13% Similarity=0.140 Sum_probs=110.5
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhh---cCCCCchhHHHHHHHHHHHhhhc
Q 010212 64 TLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGL---SFGKEPKAVMITLCFFRFWLGFG 140 (515)
Q Consensus 64 ~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~---~~~~~~~~~~~~l~~~r~l~G~~ 140 (515)
|.+......+.....+...++.++.|+++||+|||+++..+.++..++.+.... ..+. .+.+++..++.|++
T Consensus 282 g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~ 356 (438)
T PRK09952 282 GLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSI-----FWIVFFSIMLANIA 356 (438)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCCh-----HHHHHHHHHHHHHH
Confidence 777776666666667777889999999999999999988887766555443322 2221 34455566777888
Q ss_pred cccccchhhHhhhhccccccchhHHHHHH-HHHHHHHHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHH
Q 010212 141 IGGDYPLSATIMSEYANKKTRGAFIAAVF-AMQGFGILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIIL 219 (515)
Q Consensus 141 ~g~~~~~~~~~i~e~~~~~~r~~~~~~~~-~~~~~G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f 219 (515)
.+...+...+++.|.+|.+.|+...++.+ .+..+|..++|.+.+.+.+..+ .+|+..+
T Consensus 357 ~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~---------------------~~~~~~~ 415 (438)
T PRK09952 357 HDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFG---------------------GSWHSVA 415 (438)
T ss_pred HHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcC---------------------CCchHHH
Confidence 88778888999999999999988888854 4455888999999998864321 2388888
Q ss_pred HHhHHHHHHHHHHHHhcCCc
Q 010212 220 MFGAIPALLTYYWRMKMPET 239 (515)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~e~ 239 (515)
...++.+++..+..+.++|+
T Consensus 416 ~~~~~~~~i~~v~~~~~~~~ 435 (438)
T PRK09952 416 IYLLAGCLISAMTALLMKDN 435 (438)
T ss_pred HHHHHHHHHHHHHHHHcccc
Confidence 87777777766666666664
No 167
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.34 E-value=3.3e-11 Score=119.01 Aligned_cols=178 Identities=11% Similarity=0.052 Sum_probs=121.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhHHHhH-hcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHh-hch
Q 010212 293 GLHLIGTTVTWFLLDVAYYSQNLFQKDIFTA-IGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDK-IGR 370 (515)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~ 370 (515)
++.++...+..+.....+|....+.+.|+.+ .|++.... ............+..+++|+++|| +||
T Consensus 13 p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a------------~~i~~~~~~~~~~~~~~~G~laDr~~G~ 80 (489)
T PRK10207 13 PRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQA------------FITFGAFAALVYGLISIGGYVGDHLLGT 80 (489)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH------------HHHHHHHHHHHHHHHhhHHHhhhhccch
Confidence 3445666666666778888888888777654 45443321 112233333344455689999999 999
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchh--hhhhhhHHHHHHhh
Q 010212 371 FAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPAR--LRSTCHGISAASGK 448 (515)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~g~~~~~~~ 448 (515)
|+++..+.++..++.+.+.+.. .....+.+.....+.+.....|...+++.|.+|++ +|+.+.++.....+
T Consensus 81 r~~~~~g~~~~~~g~~~~~~~~-------~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~n 153 (489)
T PRK10207 81 KRTIVLGAIVLAIGYFMTGMSL-------LKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSIN 153 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc-------cchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHH
Confidence 9999999999999887776543 11112222233334444445667778899999876 45788999999999
Q ss_pred hhHHHHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHHhcc
Q 010212 449 AGAIVGAFGFLYLADTSGVKKALLILGGANFLGMLFTFLVP 489 (515)
Q Consensus 449 ~g~~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 489 (515)
+|..++|.+.|++.+..||+..|++.++..+++.+.....+
T Consensus 154 ig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~~~~~~~~ 194 (489)
T PRK10207 154 IGSLISLSLAPVIADKFGYSVTYNLCGAGLIIALLVYFACR 194 (489)
T ss_pred HHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHcc
Confidence 99999999999999999999999886654444444443433
No 168
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.34 E-value=1.1e-11 Score=119.68 Aligned_cols=163 Identities=10% Similarity=-0.014 Sum_probs=119.0
Q ss_pred HHHHHhhhhhHHHhHhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHH
Q 010212 309 AYYSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFAL 388 (515)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~ 388 (515)
.........|.+.++.|+++.+.+. ......++..++.++.|+++||+|||+.+..+..+..++.++.
T Consensus 10 ~~~~~~~~~~~~~~~~g~s~~~~g~------------~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 77 (379)
T TIGR00881 10 VRKNFALAMPYLVEEIGLSKTDLGL------------LLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFF 77 (379)
T ss_pred hHHhhhhhhHHHHHHhCCCHhHHHH------------HHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHH
Confidence 4444555567776777776654332 5566677788888999999999999999999988888887777
Q ss_pred HhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHH-HHHHHhhhccCc
Q 010212 389 AIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGA-FGFLYLADTSGV 467 (515)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~-~~~~~l~~~~g~ 467 (515)
.... +.....+..++.+.......+...+++.|.+|+++|+++.++.+....+|..+++ .+.+.+.+..+|
T Consensus 78 ~~~~--------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 149 (379)
T TIGR00881 78 GFST--------SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSW 149 (379)
T ss_pred HHhh--------hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCc
Confidence 6543 2223333334444444445677778899999999999999999999999999999 566667777889
Q ss_pred hHHHHHHHHHHHHHHHHHH-hcccc
Q 010212 468 KKALLILGGANFLGMLFTF-LVPES 491 (515)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~-~~~~~ 491 (515)
+..+.+.+++.++..+..+ +.+++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (379)
T TIGR00881 150 HWVFIVPGIIAIIVSLICFLLLRDS 174 (379)
T ss_pred hhHHHHHHHHHHHHHHHHheeeCCC
Confidence 9998888777666555554 45543
No 169
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.33 E-value=3.6e-11 Score=115.99 Aligned_cols=177 Identities=11% Similarity=0.027 Sum_probs=126.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHH
Q 010212 296 LIGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQL 375 (515)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~ 375 (515)
++...+..+......+......|.+.++.|++..+.+. ......++..++.++.|++.||+|||+.+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~------------~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~ 72 (382)
T PRK10091 5 ILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGH------------MISYYALGVVVGAPIIALFSSRYSLKHILL 72 (382)
T ss_pred HHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhH------------HHHHHHHHHHHHHHHHHHHHccCccHHHHH
Confidence 34444455555555556666778887887776554332 566677788889999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHH
Q 010212 376 MGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGA 455 (515)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~ 455 (515)
.+..+.+++.++..... + .....+.-++.+.......+.......|..|+++|++++++......++..++|
T Consensus 73 ~~~~~~~~~~~l~~~~~-------~-~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 144 (382)
T PRK10091 73 FLVALCVIGNAMFTLSS-------S-YLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGI 144 (382)
T ss_pred HHHHHHHHHHHHHHHhC-------c-HHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhc
Confidence 99888888877766543 2 222323333333332222344556778889999999999999999999999999
Q ss_pred HHHHHhhhccCchHHHHHHHHHHHHHHHHHH-hccccC
Q 010212 456 FGFLYLADTSGVKKALLILGGANFLGMLFTF-LVPESK 492 (515)
Q Consensus 456 ~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~ 492 (515)
.+.+.+.+..+|+..|.+.+++.++..+..+ .+||.+
T Consensus 145 ~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~ 182 (382)
T PRK10091 145 PLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPDIR 182 (382)
T ss_pred cHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 9999999888999999988887766655444 566643
No 170
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.33 E-value=5.4e-11 Score=119.32 Aligned_cols=164 Identities=15% Similarity=0.118 Sum_probs=118.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHH
Q 010212 295 HLIGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQ 374 (515)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~ 374 (515)
.+....+.++.............|.+.++.++++.+.+ .......++..++.++.|++.||+|||+.+
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~------------~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~ 88 (496)
T PRK03893 21 AFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAA------------SLISAAFISRWFGGLLLGAMGDRYGRRLAM 88 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHhCcHHHH
Confidence 34444455555555666666677777777776554322 144555667778889999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHH
Q 010212 375 LMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVG 454 (515)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~ 454 (515)
..+..+.+++.++..... +.....+..++.++...+..+....++.|.+|++.|++++++......+|..++
T Consensus 89 ~~~~~~~~~~~~~~~~~~--------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~ 160 (496)
T PRK03893 89 VISIVLFSVGTLACGFAP--------GYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVA 160 (496)
T ss_pred HHHHHHHHHHHHHHHHHh--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 988888887777766543 223333333444444444456667788999999999999999999999999999
Q ss_pred HHHHHHhhhccCchHHHHHHHHHH
Q 010212 455 AFGFLYLADTSGVKKALLILGGAN 478 (515)
Q Consensus 455 ~~~~~~l~~~~g~~~~~~~~~~~~ 478 (515)
+.+.+.+.+..+|+..|.+.....
T Consensus 161 ~~~~~~l~~~~~w~~~f~~~~~~~ 184 (496)
T PRK03893 161 AQVYSLVVPVWGWRALFFIGILPI 184 (496)
T ss_pred HHHHHHHhccCCHHHHHHHHHHHH
Confidence 999999999999998887644333
No 171
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.33 E-value=8.5e-11 Score=114.21 Aligned_cols=164 Identities=15% Similarity=0.132 Sum_probs=118.9
Q ss_pred HhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHH-HHHHHHHHHHHHh
Q 010212 37 YDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYG-MTLMMMVICSLAS 115 (515)
Q Consensus 37 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~-~~~~~~~i~~~~~ 115 (515)
..........|.+.+++ +.+..+.+++.+...++..++.++.|+++||+|||+.+. .+.+..+++.+..
T Consensus 236 ~~~~~~~~~~p~~~~~~----------g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l 305 (402)
T TIGR00897 236 IGLFGFAVFLPMFVAEL----------GFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLAL 305 (402)
T ss_pred HHHHHHHHHHHHHHHHc----------CCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHH
Confidence 33344455667777777 899999999999999999999999999999999988764 3334444443333
Q ss_pred hhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 010212 116 GLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFP 195 (515)
Q Consensus 116 ~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~ 195 (515)
.+.+.... +..+.+++..++.|++.+...+ ....+.|..| ++|+++.|+.+....+|..++|.+++.+.+
T Consensus 306 ~~~~~~~~-~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~------- 375 (402)
T TIGR00897 306 YYIPQHFG-HSFAVALIIAIALGIFLAGYVP-LAAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIG------- 375 (402)
T ss_pred HHHHHccC-CcHHHHHHHHHHHHHHHHHHHH-HHHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHh-------
Confidence 32211000 0156677888889988776544 4566677655 579999999999999999999999999864
Q ss_pred CCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhc
Q 010212 196 APIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKM 236 (515)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~ 236 (515)
..||+..+++.++..++..+...++
T Consensus 376 ----------------~~g~~~~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 376 ----------------FFGAIGVVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred ----------------hcchHHHHHHHHHHHHHHHHHHHHh
Confidence 3459999998877777666555554
No 172
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.32 E-value=2.1e-11 Score=118.46 Aligned_cols=144 Identities=15% Similarity=0.028 Sum_probs=109.2
Q ss_pred HHHHHHhhhHHHHHHhhhh-hhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHH
Q 010212 32 FFTDAYDLFCISLVTKLLG-RIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVI 110 (515)
Q Consensus 32 ~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i 110 (515)
.+.............|.+. +++ +.+..+.+.+.+...++..++.++.|+++||+|||+.+..+..+..+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~----------g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~ 297 (394)
T TIGR00883 228 VIATTTTFYLITTYLPTYLTQTL----------GLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAAL 297 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc----------CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHH
Confidence 3333344444445555554 566 78888999999999999999999999999999999987755554443
Q ss_pred HH--HHhhhc--CCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHH-HHHHHHHHHHHHHHHHHH
Q 010212 111 CS--LASGLS--FGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAA-VFAMQGFGILSGGMVAII 185 (515)
Q Consensus 111 ~~--~~~~~~--~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~-~~~~~~~G~~~g~~l~~~ 185 (515)
.. +...+. .+ .+.++...++.|++.+...+...+++.|.+|+++|+++.++ .+.+..+|..++|.+++.
T Consensus 298 ~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~ 371 (394)
T TIGR00883 298 LAVPLLMALLDSGS------FTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAA 371 (394)
T ss_pred HHHHHHHHHhcCCc------hHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHH
Confidence 33 222222 23 56777888899998888889999999999999999999987 456667899999999999
Q ss_pred HHHhhh
Q 010212 186 VSAAFK 191 (515)
Q Consensus 186 l~~~~~ 191 (515)
+.+..+
T Consensus 372 l~~~~g 377 (394)
T TIGR00883 372 LVAMTG 377 (394)
T ss_pred HHHHcC
Confidence 875443
No 173
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.31 E-value=4.3e-11 Score=114.93 Aligned_cols=139 Identities=15% Similarity=0.007 Sum_probs=103.8
Q ss_pred HHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccc
Q 010212 346 QTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFV 425 (515)
Q Consensus 346 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (515)
......++.+++.++.|+++||+|||+.+..+..+..++.++....... .. .+.....+..+..+.......+...+
T Consensus 39 ~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~l~g~~~~~~~~~~~~ 115 (365)
T TIGR00900 39 AALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALL--GG-LNIWQVYVLAGILAIAQAFFTPAYQA 115 (365)
T ss_pred HHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHc--CC-CcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5566677778888999999999999999998888777776665544311 11 12223333333333444444566778
Q ss_pred cccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHHh
Q 010212 426 VPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSGVKKALLILGGANFLGMLFTFL 487 (515)
Q Consensus 426 ~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 487 (515)
+..|..|+++|++++++.+....+|..++|.+.+.+.+..||+..+.+.++..+++.+..+.
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 177 (365)
T TIGR00900 116 MLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVS 177 (365)
T ss_pred HHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHh
Confidence 89999999999999999999999999999999999999899999998877766666555443
No 174
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.31 E-value=1e-10 Score=113.99 Aligned_cols=159 Identities=13% Similarity=0.094 Sum_probs=111.8
Q ss_pred hhhhhHHHhHhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhh
Q 010212 314 NLFQKDIFTAIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYH 393 (515)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~ 393 (515)
....|.+.++.+.++...+. ......++..++.++.|+++||+|||+.+..+..+..++.+......
T Consensus 33 ~~~~~~~~~~~~~s~~~~~~------------~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~- 99 (406)
T PRK15402 33 QPGMLAVVEDFNAGAEWVPT------------SMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQ- 99 (406)
T ss_pred hcchHHHHHHhCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHc-
Confidence 33445566666665443221 44556677778888999999999999999988887777766655432
Q ss_pred cccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCchHHHHH
Q 010212 394 HWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSGVKKALLI 473 (515)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~~~~~~ 473 (515)
+.........+.+.......+...+...|.+|++.|.++.++......++..++|.+.+.+.+..+|+..+++
T Consensus 100 -------~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~ 172 (406)
T PRK15402 100 -------SIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVL 172 (406)
T ss_pred -------cHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHH
Confidence 1222222223323222223455667778999999999999999888889999999999999988899999988
Q ss_pred HHHHHHHHHHHHH-hccccC
Q 010212 474 LGGANFLGMLFTF-LVPESK 492 (515)
Q Consensus 474 ~~~~~~~~~~~~~-~~~~~~ 492 (515)
.+++.+++.+..+ ..||++
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~ 192 (406)
T PRK15402 173 FAALAALSFFGLWRAMPETA 192 (406)
T ss_pred HHHHHHHHHHHHHHhCCCCC
Confidence 8888777766554 456554
No 175
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.30 E-value=2e-10 Score=114.73 Aligned_cols=171 Identities=15% Similarity=0.042 Sum_probs=120.1
Q ss_pred HHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhcCC
Q 010212 41 CISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLSFG 120 (515)
Q Consensus 41 ~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~ 120 (515)
......|.+.++. +.+....++......+...++.++.|+++||+|||++++.+.++.+++.++.+....
T Consensus 289 ~~~~~~p~i~~~~----------g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~ 358 (479)
T PRK10077 289 VVLYYAPEIFKTL----------GASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFY 358 (479)
T ss_pred HHHHHHHHHHHHc----------CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHh
Confidence 3344557777777 777777777777888889999999999999999999999999999888877764422
Q ss_pred CCchhHHHHHHHHHHHhhhcccc-ccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcc
Q 010212 121 KEPKAVMITLCFFRFWLGFGIGG-DYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFPAPIY 199 (515)
Q Consensus 121 ~~~~~~~~~l~~~r~l~G~~~g~-~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~~~~~ 199 (515)
.+.. ......+-++.+++.+. ..+....++.|.+|+++|++++++......+|..+++.+.+.+... +
T Consensus 359 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~-~-------- 427 (479)
T PRK10077 359 TQAP--GIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKN-S-------- 427 (479)
T ss_pred cCcc--cHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhc-c--------
Confidence 1110 11223333444443333 2367789999999999999999999999999999998777655310 0
Q ss_pred CCCCCCccccCCCchHHHHHHHhHHHHHHHHHH-HHhcCCch
Q 010212 200 SANPAASTVPEADYIWRIILMFGAIPALLTYYW-RMKMPETA 240 (515)
Q Consensus 200 ~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~-~~~~~e~p 240 (515)
...+..+|++.|++.++.+++..+. .++.||++
T Consensus 428 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 461 (479)
T PRK10077 428 --------WLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETK 461 (479)
T ss_pred --------chhhhccCccHHHHHHHHHHHHHHHHHhccccCC
Confidence 0023567888888876666555444 34567764
No 176
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.30 E-value=2.3e-10 Score=111.63 Aligned_cols=167 Identities=17% Similarity=0.212 Sum_probs=139.4
Q ss_pred HHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhh--hHHHHHHHHHHHH
Q 010212 34 TDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRK--RVYGMTLMMMVIC 111 (515)
Q Consensus 34 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr--~~l~~~~~~~~i~ 111 (515)
.++++ .++........+++ +.+..+...+.-+..+...+|++++|++.||+|.| ++++++++++.+.
T Consensus 294 ~dg~~-ti~~~~~i~a~~~l----------g~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i 362 (477)
T PF11700_consen 294 SDGVN-TIISFAGIYATEVL----------GMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIII 362 (477)
T ss_pred HHHHH-HHHHHHHHHHHHhc----------CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHH
Confidence 34443 34444555566688 99999999999999999999999999999999999 8998888888665
Q ss_pred HHHhhh--------cCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHH
Q 010212 112 SLASGL--------SFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVA 183 (515)
Q Consensus 112 ~~~~~~--------~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~ 183 (515)
.+...+ ..+ -+.+.+.-++.|+..|...+...++.+|..|+++.+..+|++....-....+||++.
T Consensus 363 ~~~g~~G~~~~~~g~~~------~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~ 436 (477)
T PF11700_consen 363 PLYGLFGFWPSFFGLKS------PWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLF 436 (477)
T ss_pred HHHHHHHhhhcccCccc------HHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 555444 334 588999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhcCCc
Q 010212 184 IIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKMPET 239 (515)
Q Consensus 184 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~ 239 (515)
+.+.+.+++ -|+.+....++.++.+++.+.++++
T Consensus 437 g~i~~~tg~----------------------~r~g~~~l~~lf~~gl~ll~~v~~~ 470 (477)
T PF11700_consen 437 GLITDATGS----------------------QRYGFLFLLVLFLIGLILLFFVDVE 470 (477)
T ss_pred HHHHHHhCC----------------------chhHHHHHHHHHHHHHHHHhhccch
Confidence 999987764 7888887777777777776666553
No 177
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.30 E-value=1.2e-10 Score=114.83 Aligned_cols=162 Identities=10% Similarity=0.010 Sum_probs=104.7
Q ss_pred HhhhhhHHHhHhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhh
Q 010212 313 QNLFQKDIFTAIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPY 392 (515)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~ 392 (515)
.....|.+.++ ++++.+.+. ......++..++.++.|+++||+|||+.+..+..+.+++.+++.+..
T Consensus 48 ~~~~~p~l~~~-g~s~~~~g~------------~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~ 114 (452)
T PRK11273 48 FALAMPYLVEQ-GFSRGDLGF------------ALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVP 114 (452)
T ss_pred HHHhhHHHHHc-CCCHHHHHH------------HHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhh
Confidence 34456665554 655544222 55667777888899999999999999999999888887777665532
Q ss_pred hcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHH-HHHHHHHhhhccCchHHH
Q 010212 393 HHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIV-GAFGFLYLADTSGVKKAL 471 (515)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i-~~~~~~~l~~~~g~~~~~ 471 (515)
.. ...........++.+.......+.....+.|.+|+++|++++|+.+....+|+.+ +|.+...+....+|+..|
T Consensus 115 ~~----~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f 190 (452)
T PRK11273 115 WA----TSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAAL 190 (452)
T ss_pred cc----cccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHH
Confidence 10 1122222222223233333334444566788899999999999999998888654 554433333345899999
Q ss_pred HHHHHHHHHHHHHHH-hcccc
Q 010212 472 LILGGANFLGMLFTF-LVPES 491 (515)
Q Consensus 472 ~~~~~~~~~~~~~~~-~~~~~ 491 (515)
++.+++.++..++.+ ++||+
T Consensus 191 ~i~~~~~~~~~~l~~~~~~~~ 211 (452)
T PRK11273 191 YMPAFAAILVALFAFAMMRDT 211 (452)
T ss_pred HHHHHHHHHHHHHHHHHccCC
Confidence 888777666554444 55654
No 178
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.30 E-value=1.1e-10 Score=113.26 Aligned_cols=174 Identities=11% Similarity=0.004 Sum_probs=117.1
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHH
Q 010212 299 TTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGF 378 (515)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~ 378 (515)
......+............|.+.++.++++.+.+. ......++..++.++.|+++||+|||+.+..+.
T Consensus 13 ~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~------------~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~ 80 (394)
T PRK11652 13 LVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQA------------VMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGM 80 (394)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHH------------HHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHH
Confidence 33333333334444444567777777776654322 556667778888899999999999999998888
Q ss_pred HHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHH
Q 010212 379 FFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGF 458 (515)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~ 458 (515)
.+..++.+...... +...+.+..+..+.......+....+..|.++++.++.+++..+....++..++|.+.
T Consensus 81 ~~~~~~~~~~~~~~--------~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~ 152 (394)
T PRK11652 81 SIFILGTLVALFAH--------SLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIG 152 (394)
T ss_pred HHHHHHHHHHHHHc--------cHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87777766654432 1222222222222222222344456677888889999999999999999999999999
Q ss_pred HHhhhccCchHHHHHHHHHHHHHHHHHH-hccccC
Q 010212 459 LYLADTSGVKKALLILGGANFLGMLFTF-LVPESK 492 (515)
Q Consensus 459 ~~l~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~ 492 (515)
+.+.+..||+..|.+.+++.++..+... +.||++
T Consensus 153 ~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~ 187 (394)
T PRK11652 153 GLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETR 187 (394)
T ss_pred HHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 9999888999999888776665544433 556643
No 179
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.29 E-value=1.2e-10 Score=116.28 Aligned_cols=184 Identities=17% Similarity=0.136 Sum_probs=128.8
Q ss_pred HHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHH
Q 010212 24 AIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGM 103 (515)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~ 103 (515)
.+....+..+.............|.+.+++ +.+..+.++......++..++.++.|+++||+|||+.+..
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~ 354 (481)
T TIGR00879 285 LFLGVVLQWFQQFTGINAIMYYSPTIFENA----------GVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLI 354 (481)
T ss_pred HHHHHHHHHHHHHhCCeehHHHHHHHHHHc----------CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHH
Confidence 333334444443433444455667777777 8888888999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhh---cCCCCc--hhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHH
Q 010212 104 TLMMMVICSLASGL---SFGKEP--KAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILS 178 (515)
Q Consensus 104 ~~~~~~i~~~~~~~---~~~~~~--~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~ 178 (515)
+.++.+++.++.++ ...... ......+....++.+.......+....++.|.+|+++|+++.++.+....+|.++
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i 434 (481)
T TIGR00879 355 GAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFI 434 (481)
T ss_pred HHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHH
Confidence 98888887777662 111100 0012333333333333223335677788899999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHH-HhcCCch
Q 010212 179 GGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWR-MKMPETA 240 (515)
Q Consensus 179 g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~-~~~~e~p 240 (515)
++.+.+.+.+ ..+|++.|++.++.+++..+.. ++.||++
T Consensus 435 ~~~~~~~~~~-----------------------~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~ 474 (481)
T TIGR00879 435 VGFLFPTMLE-----------------------SIGVGGVFIFFGGLNVLGLIFVYFFLPETK 474 (481)
T ss_pred HHHHHHHHHH-----------------------hcCccceehhHHHHHHHHHHHHheecccCC
Confidence 9999888853 3458988888777766655444 4566654
No 180
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.28 E-value=1.9e-09 Score=107.05 Aligned_cols=157 Identities=17% Similarity=0.157 Sum_probs=118.8
Q ss_pred HHhhhhhhhhccCCCCCCCCCchhHHHHHHH-HHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHh---hhcCC
Q 010212 45 VTKLLGRIYYYKEGSDSPGTLPDNVASAVNG-VALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLAS---GLSFG 120 (515)
Q Consensus 45 ~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s-~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~---~~~~~ 120 (515)
..|.+.+++ |.+.++.+++.. ...++..++.+++|+++||+|||+.+.++.++.+++.++. +...+
T Consensus 245 ~~~~l~~~~----------G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~ 314 (491)
T PRK11010 245 TTTFLIRGV----------GFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDK 314 (491)
T ss_pred HHHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 345555667 899999999974 6668999999999999999999998777666655544332 23222
Q ss_pred CCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccC
Q 010212 121 KEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFPAPIYS 200 (515)
Q Consensus 121 ~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~~~~~~ 200 (515)
. .+.+.+.-+++.++.|...+...++..+..+++.+++..++.+...++|..+++.+.+.+.+.
T Consensus 315 ~-----~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~----------- 378 (491)
T PRK11010 315 N-----LYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEA----------- 378 (491)
T ss_pred c-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------
Confidence 1 445555666666555656677788999999999999999999999999999888888888643
Q ss_pred CCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhcCCc
Q 010212 201 ANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKMPET 239 (515)
Q Consensus 201 ~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~ 239 (515)
.||+..|.+.++.+++.++....++++
T Consensus 379 ------------~G~~~~f~~~~~~~l~~l~~~~~~~~~ 405 (491)
T PRK11010 379 ------------HGWPTFYLFSVAAAVPGLLLLLVCRQT 405 (491)
T ss_pred ------------hChHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 459999999888888776666555544
No 181
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.27 E-value=8.4e-11 Score=115.61 Aligned_cols=142 Identities=10% Similarity=0.008 Sum_probs=99.5
Q ss_pred HHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccc
Q 010212 346 QTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFV 425 (515)
Q Consensus 346 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (515)
......++..++.++.|+++||+|||+.+..+.++.+++.++....... ........+..+..+.......+....
T Consensus 66 ~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~~~l~g~~~g~~~~~~~~ 141 (438)
T TIGR00712 66 ALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWA----TSSIAIMFVLLFLNGWFQGMGWPPCGR 141 (438)
T ss_pred HHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccc----cchHHHHHHHHHHHHHHhhcchHHHHH
Confidence 5566667788889999999999999999888887777776665433210 112222222222233333323455556
Q ss_pred cccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhh-ccCchHHHHHHHHHHHHHHHHHH-hcccc
Q 010212 426 VPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLAD-TSGVKKALLILGGANFLGMLFTF-LVPES 491 (515)
Q Consensus 426 ~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~-~~g~~~~~~~~~~~~~~~~~~~~-~~~~~ 491 (515)
.+.|.+|+++|++++|+.+....+++.+++.+.+...+ ..+|+..|++.++++++..+..+ +++|+
T Consensus 142 ~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~ 209 (438)
T TIGR00712 142 TMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDT 209 (438)
T ss_pred HHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 77899999999999999999999999999888776554 46899999998888777655544 55554
No 182
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.27 E-value=1.9e-10 Score=111.96 Aligned_cols=140 Identities=16% Similarity=0.134 Sum_probs=103.5
Q ss_pred HHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccc
Q 010212 346 QTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFV 425 (515)
Q Consensus 346 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (515)
......++..++.++.|+++||+|||+.+..+..+..++.++..... +...+.+.-++.+.......+..++
T Consensus 56 ~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~--------~~~~l~~~r~l~Gi~~~~~~~~~~~ 127 (413)
T PRK15403 56 SVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTT--------SMTQFLIARFIQGTSICFIATVGYV 127 (413)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcC--------CHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555677778888999999999999999988888777776665433 2222222222222222222344567
Q ss_pred cccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHH-hccccCC
Q 010212 426 VPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSGVKKALLILGGANFLGMLFTF-LVPESKG 493 (515)
Q Consensus 426 ~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 493 (515)
+..|.+|++++++++++.+....++..++|.+.+.+.+..||+..|++.+++.+++.+..+ .+||+++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~ 196 (413)
T PRK15403 128 TVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPETVK 196 (413)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 7789999999999999999999999999999999998888999999998888777766544 5676543
No 183
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.26 E-value=1.8e-10 Score=114.43 Aligned_cols=171 Identities=12% Similarity=-0.002 Sum_probs=112.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHh-HhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHh-hchhhH
Q 010212 296 LIGTTVTWFLLDVAYYSQNLFQKDIFT-AIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDK-IGRFAI 373 (515)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~ 373 (515)
++...+..++....+|....+.+.++. +.|+++... +. .............+++|+++|| +|||+.
T Consensus 23 ~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a-----------~~-~~~~~~~~~~~~~~~~G~LaDr~~G~r~~ 90 (500)
T PRK09584 23 FYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADS-----------IT-LFSSFSALVYGLVAIGGWLGDKVLGTKRV 90 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH-----------HH-HHHHHHHHHHHHHHHHHHHHHhccchHHH
Confidence 455555666666777888888888874 456654331 11 2222222223334578999999 599999
Q ss_pred HHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchh--hhhhhhHHHHHHhhhhH
Q 010212 374 QLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPAR--LRSTCHGISAASGKAGA 451 (515)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~g~~~~~~~~g~ 451 (515)
+..+..+..++..++.+.. .....+.+.....+.+.....+...++..|.+|++ .+..+.++.+...++|.
T Consensus 91 ~~~g~~~~~ig~~l~~~~~-------~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~ 163 (500)
T PRK09584 91 IMLGAIVLAIGYALVAWSG-------HDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGS 163 (500)
T ss_pred HHHHHHHHHHHHHHHHHhc-------ccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHH
Confidence 9999888888876665432 11122222222233333334456667889998754 34567888999999999
Q ss_pred HHHHHHHHHhhhccCchHHHHHHHHHHHHHHHHH
Q 010212 452 IVGAFGFLYLADTSGVKKALLILGGANFLGMLFT 485 (515)
Q Consensus 452 ~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~ 485 (515)
.++|.+.+++.+..||+..|.+.++..+++.+..
T Consensus 164 ~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~ 197 (500)
T PRK09584 164 FFSMLATPWLAAKYGWSVAFALSVVGMLITVVNF 197 (500)
T ss_pred HHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998776555555433
No 184
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.26 E-value=1.4e-10 Score=110.47 Aligned_cols=162 Identities=9% Similarity=0.014 Sum_probs=108.2
Q ss_pred HHHHhhhhhHHHhHhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHH
Q 010212 310 YYSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALA 389 (515)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~ 389 (515)
+.......|.+.++.++++.+.+. ......++..++.+..|+++||+|||+.+.........+....
T Consensus 7 ~~~~~~~lp~i~~~~~~s~~~~g~------------~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~- 73 (368)
T TIGR00903 7 WVTFSPVLSLVAEDIDVSKEELGL------------LAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRL- 73 (368)
T ss_pred HHHHHhhHHHHHHHhCcCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHH-
Confidence 344455667777777776554322 4555666777788899999999999987655443333332211
Q ss_pred hhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCchH
Q 010212 390 IPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSGVKK 469 (515)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~~ 469 (515)
... .+.....+.-+..+..... .........|.+|+++|++++++......+|..+++.+.+.+.+..||+.
T Consensus 74 ~~~-------~~~~~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~ 145 (368)
T TIGR00903 74 LDP-------FNYEWLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQL 145 (368)
T ss_pred HHh-------ccHHHHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHH
Confidence 110 1122222222222222222 23344555899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHH-hccccC
Q 010212 470 ALLILGGANFLGMLFTF-LVPESK 492 (515)
Q Consensus 470 ~~~~~~~~~~~~~~~~~-~~~~~~ 492 (515)
.|.+.+++.++..++.+ ++||.+
T Consensus 146 ~f~~~~~l~~~~~~~~~~~lp~~p 169 (368)
T TIGR00903 146 LIIPIAAVAAAGIILVLAALPALP 169 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCC
Confidence 99998888777666555 667653
No 185
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.25 E-value=2.6e-10 Score=110.53 Aligned_cols=161 Identities=14% Similarity=0.116 Sum_probs=112.0
Q ss_pred HHHHHhhhhhHHH-hHhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHH
Q 010212 309 AYYSQNLFQKDIF-TAIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFA 387 (515)
Q Consensus 309 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~ 387 (515)
..+....+.+.++ ++.|+++...+. ......+...+..++.|+++||+|||+.+..+..+..++.+.
T Consensus 25 ~~~~~~~~~~~~~~~~~g~s~~~~gl------------~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~ 92 (400)
T PRK11646 25 GFFVVFPLISIRFVDQLGWAAVMVGI------------ALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFAT 92 (400)
T ss_pred HHHHHHHHHHHHHHHHhCCcHHHHHH------------HHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 3444444445444 456666544222 444445555666788999999999999999999888888877
Q ss_pred HHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCc
Q 010212 388 LAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSGV 467 (515)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~ 467 (515)
+.... +.+.+....+..+.......+...+++.|..|+++|++++|+.....++|..++|.+.+.+. ..||
T Consensus 93 ~~~~~--------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~ 163 (400)
T PRK11646 93 MAIAH--------EPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDF 163 (400)
T ss_pred HHHhc--------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhH
Confidence 65432 22223333333333333344566677889999999999999999999999999999999998 6799
Q ss_pred hHHHHHHHHHHHHHHHHHH-hccc
Q 010212 468 KKALLILGGANFLGMLFTF-LVPE 490 (515)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~-~~~~ 490 (515)
+..|++.++.+++..++.. +.++
T Consensus 164 ~~~f~~~~~~~~~~~i~~~~~~~~ 187 (400)
T PRK11646 164 RLVCATGAVLFVLAAAFNAWLLPA 187 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCc
Confidence 9999888777666654443 4454
No 186
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.25 E-value=3.1e-10 Score=104.15 Aligned_cols=177 Identities=13% Similarity=0.181 Sum_probs=145.8
Q ss_pred HHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHH
Q 010212 24 AIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGM 103 (515)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~ 103 (515)
..++.+-..+.++.+ .+++.....-..++ |++..+..++.....+..+++++++|++.||+|.|+++..
T Consensus 255 ~~FLiA~~~~~DGv~-til~~~~~fg~~~~----------gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~ 323 (438)
T COG2270 255 VLFLIARFFYIDGVN-TILAMGGVFGAADL----------GLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMI 323 (438)
T ss_pred HHHHHHHHHHHhhHH-HHHHHHHHHHHHHc----------CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehH
Confidence 334444444555554 33444444445588 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHH
Q 010212 104 TLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVA 183 (515)
Q Consensus 104 ~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~ 183 (515)
++++..+.++...+... -..+.++-.+.|...|+.+....++..+..|+++-++.+|++......+..+||.+-
T Consensus 324 ~lvi~~~~~~~~~~~~~------~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv 397 (438)
T COG2270 324 GLVILSIAALYLIFLEG------ELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLV 397 (438)
T ss_pred HHHHHHHHHHHHHHccc------cHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHH
Confidence 99999999888887776 467888889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhcCCc
Q 010212 184 IIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKMPET 239 (515)
Q Consensus 184 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~ 239 (515)
+.+.+.+++ -|..+....++..+.++....+|+.
T Consensus 398 ~v~t~iTg~----------------------~r~g~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 398 AVITQITGS----------------------SRAGVLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred HHHHHHhcc----------------------hhhHHHHHHHHHHhhHhhEEeecCC
Confidence 999988775 6666666666666666666666654
No 187
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.24 E-value=1e-10 Score=112.88 Aligned_cols=157 Identities=15% Similarity=0.123 Sum_probs=115.5
Q ss_pred hhhhHHHhHhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhc
Q 010212 315 LFQKDIFTAIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHH 394 (515)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (515)
...|.+.++.+.++.+.+. ......++..++.++.|++.||+|||+.+..+..+..++..+.....
T Consensus 12 p~~~~~~~~~~~s~~~~~~------------~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~-- 77 (377)
T PRK11102 12 PALPVIAADFGVSAGSVQM------------TLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQ-- 77 (377)
T ss_pred ccHHHHHHHhCCCHHHHHH------------HHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHc--
Confidence 4456666666665544222 55566677788899999999999999999999888888877766543
Q ss_pred ccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCchHHHHHH
Q 010212 395 WTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSGVKKALLIL 474 (515)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~~~~~~~ 474 (515)
......+..+..+++.....+...++..|.+|+++|++++++.+....+|..++|.+.+.+.+..+|+..+.+.
T Consensus 78 ------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~ 151 (377)
T PRK11102 78 ------TIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVL 151 (377)
T ss_pred ------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHH
Confidence 12222233333333333334566678899999999999999999999999999999999999988999999888
Q ss_pred HHHHHHHHHHHH-hcccc
Q 010212 475 GGANFLGMLFTF-LVPES 491 (515)
Q Consensus 475 ~~~~~~~~~~~~-~~~~~ 491 (515)
++++++..++.. ..+|+
T Consensus 152 ~~~~~~~~~~~~~~~~~~ 169 (377)
T PRK11102 152 ALAAILAAALVFFFIPET 169 (377)
T ss_pred HHHHHHHHHHHHHhCCcc
Confidence 877777665554 55554
No 188
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.24 E-value=1.4e-11 Score=113.71 Aligned_cols=145 Identities=18% Similarity=0.083 Sum_probs=119.0
Q ss_pred HHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccc
Q 010212 346 QTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFV 425 (515)
Q Consensus 346 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (515)
......+...++.+++|++.||++||+++.+|..+-.++.+..++.. ..+.+.+.=.+.+.+.....|+..+
T Consensus 73 l~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~--------~Fwq~~l~R~~vGiGeAs~~~ia~s 144 (493)
T KOG1330|consen 73 LQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSN--------HFWQVLLCRGFVGIGEASYSPIAPS 144 (493)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHH--------HHHHHHHHHHHhccchhhhcccchh
Confidence 66777778888999999999999999999999999888888877764 3444555555556666677888999
Q ss_pred cccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccC-chHHHHHHHHHHHHHHHHHH-hccccCCCChhh
Q 010212 426 VPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSG-VKKALLILGGANFLGMLFTF-LVPESKGKSLEE 498 (515)
Q Consensus 426 ~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 498 (515)
+++|.+|.++|++++++.+.+...|..+|-.....+.+..+ |+++|...+++.++..++.+ +.+|.+++..++
T Consensus 145 ~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~ 219 (493)
T KOG1330|consen 145 LIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERGARDE 219 (493)
T ss_pred HhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCcccccccc
Confidence 99999999999999999999999999999888888877666 99999999999988888777 666655443333
No 189
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.24 E-value=4.5e-10 Score=98.52 Aligned_cols=184 Identities=12% Similarity=0.081 Sum_probs=137.6
Q ss_pred HHHHHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhH
Q 010212 21 HFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRV 100 (515)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~ 100 (515)
||..+..........+ ..+.++...|++++.+ |.|.+|...+...-.+|..+ .++.|.+.|++|+|.+
T Consensus 1 rW~~l~a~~~v~~~~G-t~Y~Fs~yS~~Lk~~l----------~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~ 68 (250)
T PF06813_consen 1 RWLSLVASIWVQLCSG-TTYTFSAYSPQLKSRL----------GYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVV 68 (250)
T ss_pred ChhhHHHHHHHHHhcC-cccchhhhhHHHHHHh----------CCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHH
Confidence 3555555444444444 4577788899999999 99999999999999999887 5899999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCch-hHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHH
Q 010212 101 YGMTLMMMVICSLASGLSFGKEPK-AVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSG 179 (515)
Q Consensus 101 l~~~~~~~~i~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g 179 (515)
+.+|.+...+|..+...+.+..-. ..+|.+.+..++.|.+.+.....+.....+.+|+ +||++.|+.-...+++..+-
T Consensus 69 l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvgilk~~~GLSaai~ 147 (250)
T PF06813_consen 69 LLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-SRGTVVGILKGFFGLSAAIF 147 (250)
T ss_pred HHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-ccCceehhhhHHHHhHHHHH
Confidence 999999999999887765443211 2378888888898888777777777777788985 69999999999999988776
Q ss_pred HHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhcCCch
Q 010212 180 GMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKMPETA 240 (515)
Q Consensus 180 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p 240 (515)
..+...+. ++..-+..+.+...+.++.++..++++..|
T Consensus 148 t~i~~~~f-----------------------~~~~~~fll~la~~~~~v~l~~~~~vr~~~ 185 (250)
T PF06813_consen 148 TQIYSAFF-----------------------GDDPSSFLLFLAVLPAVVCLVAMFFVRPVP 185 (250)
T ss_pred HHHHHHHc-----------------------CCChHHHHHHHHHHHHHHHHHHhhheeccC
Confidence 66655542 112244555555556666666656665544
No 190
>PRK11043 putative transporter; Provisional
Probab=99.23 E-value=4.2e-10 Score=109.52 Aligned_cols=138 Identities=12% Similarity=0.076 Sum_probs=100.2
Q ss_pred HHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccc
Q 010212 346 QTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFV 425 (515)
Q Consensus 346 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (515)
......++..++.++.|+++||+|||+.+..+..+..++.++..... +.....+..+..+.......+...+
T Consensus 46 ~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~--------~~~~l~~~~~l~G~~~~~~~~~~~~ 117 (401)
T PRK11043 46 SLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVE--------SAAQLLVLRFVQAVGVCSAAVIWQA 117 (401)
T ss_pred HHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhc--------CHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 55666777788999999999999999999888877777666655432 1222222222222222222334456
Q ss_pred cccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHHhcccc
Q 010212 426 VPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSGVKKALLILGGANFLGMLFTFLVPES 491 (515)
Q Consensus 426 ~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (515)
...|.+|++.++...+..+....++..++|.+.+.+.+..||+..+++.+++.++..+..++.++.
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (401)
T PRK11043 118 LVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRLKPS 183 (401)
T ss_pred HHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 778999999899999999988999999999999999999999999988887777766665555443
No 191
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.22 E-value=5.6e-10 Score=110.04 Aligned_cols=121 Identities=17% Similarity=0.245 Sum_probs=103.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhcccccc
Q 010212 66 PDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDY 145 (515)
Q Consensus 66 s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~ 145 (515)
+..+.+++.+...++..++.+++++++||+|||+++..+..+.+++.++..+.++. .+.+++..++.|++.+...
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~g~~~~~~~ 329 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSN-----LPLILVLIILAGFGQNFVT 329 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchh-----HHHHHHHHHHHHHHHHHHH
Confidence 35567788888899999999999999999999999999998888888777665431 5677788889999999888
Q ss_pred chhhHhhhhccc-------cccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 010212 146 PLSATIMSEYAN-------KKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFK 191 (515)
Q Consensus 146 ~~~~~~i~e~~~-------~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~ 191 (515)
+...++++|..+ ++++|...++.+....+|..+++.+.+.+.+..+
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G 382 (437)
T TIGR00792 330 GLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIG 382 (437)
T ss_pred HHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999999875 4567999999999999999999999999987665
No 192
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.22 E-value=1.6e-10 Score=114.80 Aligned_cols=136 Identities=15% Similarity=0.059 Sum_probs=106.5
Q ss_pred HHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccc
Q 010212 346 QTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFV 425 (515)
Q Consensus 346 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (515)
......++.+++.+..|++.||+|||+.+..+.++..++.++...... ......++.-++.+.......+....
T Consensus 81 ~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~------~~~~~l~~~r~~~G~~~~~~~~~~~~ 154 (465)
T TIGR00894 81 ILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAG------GGIALVVFCRVIQGLAQGSVSPATHK 154 (465)
T ss_pred HHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHH------cCchHHHHHHHHHHHhcccchhhHHH
Confidence 556666778888999999999999999999888877777666543321 11223444445555555666777888
Q ss_pred cccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhc-cCchHHHHHHHHHHHHHHHHHHh
Q 010212 426 VPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADT-SGVKKALLILGGANFLGMLFTFL 487 (515)
Q Consensus 426 ~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~-~g~~~~~~~~~~~~~~~~~~~~~ 487 (515)
++.|.+|+++|++++|+......+|..+++.+.+.+.+. .||+..|++.++..++..++++.
T Consensus 155 ~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~ 217 (465)
T TIGR00894 155 IIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFV 217 (465)
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999988 49999999988877776666553
No 193
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.22 E-value=6.7e-10 Score=109.53 Aligned_cols=150 Identities=15% Similarity=0.116 Sum_probs=131.2
Q ss_pred HHHHHhhhhh-hhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhcCC
Q 010212 42 ISLVTKLLGR-IYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLSFG 120 (515)
Q Consensus 42 ~~~~~~~i~~-~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~ 120 (515)
+..++|.+.+ ++ +.+....|++.+++.+|..+++++.+++.+|+++++.+..+.++++++.+..+++++
T Consensus 237 ~~aLlPl~a~~~l----------~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~ 306 (524)
T PF05977_consen 237 VWALLPLFARDVL----------GGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPS 306 (524)
T ss_pred HHHhhhHHHHHHh----------CCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchH
Confidence 3456777665 46 888999999999999999999999999999999999999999999999999999988
Q ss_pred CCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccC
Q 010212 121 KEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFPAPIYS 200 (515)
Q Consensus 121 ~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~~~~~~ 200 (515)
.+..++.-++.|++.........+.+.+..|++.|||+++++.+....+..+|..+.|.+.+..+
T Consensus 307 ------~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g--------- 371 (524)
T PF05977_consen 307 ------FWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFG--------- 371 (524)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---------
Confidence 78888999999999888888889999999999999999999999999999999999999975544
Q ss_pred CCCCCccccCCCchHHHHHHHhHHHHHHHH
Q 010212 201 ANPAASTVPEADYIWRIILMFGAIPALLTY 230 (515)
Q Consensus 201 ~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~ 230 (515)
-+..+.++++..++..
T Consensus 372 --------------~~~al~~a~~~lll~~ 387 (524)
T PF05977_consen 372 --------------VRTALLIAGAALLLSA 387 (524)
T ss_pred --------------HHHHHHHHHHHHHHHH
Confidence 7778877665544433
No 194
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.22 E-value=5.2e-10 Score=107.47 Aligned_cols=172 Identities=14% Similarity=0.168 Sum_probs=113.8
Q ss_pred HHHHHHHHHHHHHHHhhhhhH-HHhHhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHH
Q 010212 299 TTVTWFLLDVAYYSQNLFQKD-IFTAIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMG 377 (515)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~ 377 (515)
..+..+......+....+.|. +.++.++++.+.+. ......++..++.++.|+++||+|||+.+..+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~------------~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~ 73 (366)
T TIGR00886 6 SWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGN------------LVAVPVLAGAVLRIILGFLVDKFGPRYTTTLS 73 (366)
T ss_pred HHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhH------------hhHHHHHHHHHHHHHHHHHHHHhCchHHHHHH
Confidence 344444445566666777775 55667776655333 56667778888999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHH
Q 010212 378 FFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFG 457 (515)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~ 457 (515)
..+..++.++...... ......+..+..+.... ..+....++.|.+|+++|+++.++.....++|..+++.+
T Consensus 74 ~~~~~i~~~~~~~~~~-------~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i 145 (366)
T TIGR00886 74 LLLLAIPCLWAGLAVQ-------SYSVLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFV 145 (366)
T ss_pred HHHHHHHHHHHHHHhh-------hHHHHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHH
Confidence 8888888777655330 22222223333333332 234456778999999999999999998888888888887
Q ss_pred HHHhhh----------ccCchHHH-HHHHHHHHHHHHHHH-hccc
Q 010212 458 FLYLAD----------TSGVKKAL-LILGGANFLGMLFTF-LVPE 490 (515)
Q Consensus 458 ~~~l~~----------~~g~~~~~-~~~~~~~~~~~~~~~-~~~~ 490 (515)
.+.+.+ ..+|+..+ ...+++..+..++.+ +.++
T Consensus 146 ~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (366)
T TIGR00886 146 MPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILLLPALLIFFVGAD 190 (366)
T ss_pred HHHHHHHHHhcccccccccccchhHHHHHHHHHHHHHHHHHhccc
Confidence 776654 23788887 433444444333333 4444
No 195
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.21 E-value=2.9e-10 Score=109.90 Aligned_cols=134 Identities=14% Similarity=0.095 Sum_probs=97.9
Q ss_pred HHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccc
Q 010212 346 QTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFV 425 (515)
Q Consensus 346 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (515)
......+...+..++.|++.||+|||+++..+..+..++.+.+.... .. .+.-+..+.......|...+
T Consensus 43 ~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~--------~~---~~~r~l~G~~~a~~~pa~~a 111 (393)
T PRK11195 43 LQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGI--------HP---LLAYGLVGIGAAAYSPAKYG 111 (393)
T ss_pred HHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHH--------HH---HHHHHHHHHHHHHHHHHHHH
Confidence 45556667778888999999999999999999888877666544322 11 12222334444455688889
Q ss_pred cccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHHhcccc
Q 010212 426 VPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSGVKKALLILGGANFLGMLFTFLVPES 491 (515)
Q Consensus 426 ~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (515)
++.|.+|+++|++++|+......++..+||.+.|.+.+. .+...+.+.+.+.+++.+....+||.
T Consensus 112 ~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~~~~~~~~l~~~ 176 (393)
T PRK11195 112 ILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP-HAEAALAVCALIYLLAALFNLFIPRL 176 (393)
T ss_pred HHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 999999999999999999999999999999999999885 36666655555444444444456654
No 196
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.21 E-value=9e-10 Score=106.30 Aligned_cols=119 Identities=7% Similarity=-0.110 Sum_probs=104.7
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhcccc
Q 010212 64 TLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGG 143 (515)
Q Consensus 64 ~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 143 (515)
|.+..+.|.+.+...++..+..++.|++.||+|+|+.+..+.++.+++.++.+.+++ .+.+++..++.|++.+.
T Consensus 236 g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~g~~~~~ 309 (382)
T PRK11128 236 GYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTA------LPWLIVIQILHCGTFTV 309 (382)
T ss_pred CCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhh------HHHHHHHHHHHHHHHHH
Confidence 889999999999999999999999999999999999999999999988888888777 78889999999999998
Q ss_pred ccchhhHhhhhccccccchhHHHHHH-HHHHHHHHHHHHHHHHHHHh
Q 010212 144 DYPLSATIMSEYANKKTRGAFIAAVF-AMQGFGILSGGMVAIIVSAA 189 (515)
Q Consensus 144 ~~~~~~~~i~e~~~~~~r~~~~~~~~-~~~~~G~~~g~~l~~~l~~~ 189 (515)
..+....++.+. +++++++..+... ...++|..+||.++|.+.+.
T Consensus 310 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~ 355 (382)
T PRK11128 310 CHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQH 355 (382)
T ss_pred HHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 888888988887 5566788888876 55678889999999999644
No 197
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.20 E-value=1.2e-09 Score=107.24 Aligned_cols=135 Identities=14% Similarity=0.067 Sum_probs=93.6
Q ss_pred HHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccc
Q 010212 348 LIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVP 427 (515)
Q Consensus 348 ~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (515)
....++..++.++.|+++||+|||+.+..+..+..++.++.++................+.-+..+.+..+..+...+++
T Consensus 70 ~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i 149 (432)
T PRK10406 70 AAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYM 149 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHH
Confidence 44556667899999999999999999999999988888877654311000000111233333344444445567788999
Q ss_pred cccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhh--------hccCchHHHHHHHHHHHHHH
Q 010212 428 AEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLA--------DTSGVKKALLILGGANFLGM 482 (515)
Q Consensus 428 ~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~--------~~~g~~~~~~~~~~~~~~~~ 482 (515)
.|..|+++|+...++.......|..+++.+...+. +..||+..|.+.++..++..
T Consensus 150 ~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~ 212 (432)
T PRK10406 150 SEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVAL 212 (432)
T ss_pred HHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHH
Confidence 99999999999999888777777777776654443 25799999987766665543
No 198
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.20 E-value=7.9e-10 Score=106.40 Aligned_cols=177 Identities=11% Similarity=0.069 Sum_probs=107.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhHHHh-HhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhH
Q 010212 295 HLIGTTVTWFLLDVAYYSQNLFQKDIFT-AIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAI 373 (515)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~ 373 (515)
.++...+.+.......+......+.+-+ +.++++.+.+ . ......+...+.++..|++.||+|.|++
T Consensus 35 ~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g-----------~-l~ai~~l~~al~rip~G~l~Dr~G~R~v 102 (462)
T PRK15034 35 NLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLF-----------L-LTALPSVSGALLRVPYSFMVPIFGGRRW 102 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHH-----------H-HHHHHHHHHHHHHHHHHHHHHHhCChHH
Confidence 3444444444444444444444444443 4666555422 2 3333444555667788999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHH
Q 010212 374 QLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIV 453 (515)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i 453 (515)
+..+..+..+..+...+.... ..+++....+..++.+..+. ..+.....+++.+|+++||+++|+....+++|..+
T Consensus 103 ~~~~~ll~~i~~~~~~~a~~~---~~~s~~~lli~r~l~Gigg~-~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l 178 (462)
T PRK15034 103 TVFSTAILIIPCVWLGIAVQN---PNTPFGIFIVIALLCGFAGA-NFASSMGNISFFFPKAKQGSALGINGGLGNLGVSV 178 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHcc---cCCCHHHHHHHHHHHHHHHH-hHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHH
Confidence 999888888777776653110 01123333333333333322 45667778899999999999999998788888877
Q ss_pred HHHHHHHhh-----h-------------ccCchHHHHHHHHHHHHHHHHHHh
Q 010212 454 GAFGFLYLA-----D-------------TSGVKKALLILGGANFLGMLFTFL 487 (515)
Q Consensus 454 ~~~~~~~l~-----~-------------~~g~~~~~~~~~~~~~~~~~~~~~ 487 (515)
++.+.+.+. + ..+++.+..+...+.++..++.++
T Consensus 179 ~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~ 230 (462)
T PRK15034 179 MQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWS 230 (462)
T ss_pred HHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666665533 2 223566666666666666655553
No 199
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.20 E-value=8.8e-10 Score=107.02 Aligned_cols=138 Identities=7% Similarity=-0.027 Sum_probs=113.6
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhcccc
Q 010212 64 TLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGG 143 (515)
Q Consensus 64 ~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 143 (515)
+.+..+.|.+.+...+...++.+..|++.||+|||+.+.++..+.+++..+...+++ .+.+++.+++.|++.+.
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~------~~~~~~~~~l~g~~~~~ 323 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATT------ALEVVILKMLHAFEVPF 323 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCC------hHHHHHHHHHHHHHHHH
Confidence 445567899999999999999999999999999999999999998888887777777 67888899999998766
Q ss_pred ccchhhHhhhhccccccchhHHHH-HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHh
Q 010212 144 DYPLSATIMSEYANKKTRGAFIAA-VFAMQGFGILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFG 222 (515)
Q Consensus 144 ~~~~~~~~i~e~~~~~~r~~~~~~-~~~~~~~G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~ 222 (515)
.......++.+..+++.++...+. .+....+|..+++.+++.+.+. .||+..|.+.
T Consensus 324 ~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~-----------------------~G~~~~f~~~ 380 (396)
T TIGR00882 324 LLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDS-----------------------IGFQGAYLVL 380 (396)
T ss_pred HHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHh-----------------------cccHHHHHHH
Confidence 656666777888888888776665 5678899999999999999643 4599999987
Q ss_pred HHHHHHHH
Q 010212 223 AIPALLTY 230 (515)
Q Consensus 223 ~~~~~~~~ 230 (515)
++..++..
T Consensus 381 ~~~~~i~~ 388 (396)
T TIGR00882 381 GCIVLLFT 388 (396)
T ss_pred HHHHHHHH
Confidence 66665543
No 200
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.19 E-value=1.3e-09 Score=109.13 Aligned_cols=145 Identities=18% Similarity=0.176 Sum_probs=104.6
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCcccccc
Q 010212 345 AQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTF 424 (515)
Q Consensus 345 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (515)
.......++.+++.++.|++.||+|||+.+..+.++..++.++...... ..+........+.-+..+++..+..+...
T Consensus 60 ~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~--~~~~~~~~~~~~~r~l~G~~~g~~~~~~~ 137 (502)
T TIGR00887 60 AVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPG--SSPKSVMATLCFWRFWLGVGIGGDYPLSA 137 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccC--cccchHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 3566677888899999999999999999999888888887766654321 00001122333344444444444567788
Q ss_pred ccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhh-----------------------ccCchHHHHHHHHHHHHH
Q 010212 425 VVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLAD-----------------------TSGVKKALLILGGANFLG 481 (515)
Q Consensus 425 ~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~-----------------------~~g~~~~~~~~~~~~~~~ 481 (515)
.+..|.+|++.|++++++......+|..+++.+...+.. ..+|+..+.+.++..++.
T Consensus 138 ~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~ 217 (502)
T TIGR00887 138 IITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLA 217 (502)
T ss_pred HHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998888765432 137998887766666665
Q ss_pred HHHHHhcccc
Q 010212 482 MLFTFLVPES 491 (515)
Q Consensus 482 ~~~~~~~~~~ 491 (515)
.+..+++||+
T Consensus 218 ~~~~~~lpES 227 (502)
T TIGR00887 218 LYFRLTIPET 227 (502)
T ss_pred HHHHHhCCCC
Confidence 5555577876
No 201
>TIGR00898 2A0119 cation transport protein.
Probab=99.16 E-value=6.2e-10 Score=111.85 Aligned_cols=138 Identities=16% Similarity=0.104 Sum_probs=109.2
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhh
Q 010212 74 NGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMS 153 (515)
Q Consensus 74 ~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~ 153 (515)
.....+....+.++.+++.||+|||+.+.++.++.+++.++..+.++.. .+..++.-++.+++.+...+....+..
T Consensus 361 ~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (505)
T TIGR00898 361 LFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDL----YFLRTALAVLGKFGITSAFQMVYLYTA 436 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCc----hHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3445567778899999999999999999999999999888888776521 244555566667777777788899999
Q ss_pred hccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHH
Q 010212 154 EYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWR 233 (515)
Q Consensus 154 e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~ 233 (515)
|.+|++.|++++++.+....+|.+++|.+.+ +. ..++..++++.+...++..+..
T Consensus 437 e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~------------------------~~~~~~~~~~~~~~~~~~~~~~ 491 (505)
T TIGR00898 437 ELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LG------------------------EKWLFLPLVLFGGLALLAGILT 491 (505)
T ss_pred ccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HH------------------------HHHHhhHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999988 42 1236667777777666666667
Q ss_pred HhcCCch
Q 010212 234 MKMPETA 240 (515)
Q Consensus 234 ~~~~e~p 240 (515)
+++||+.
T Consensus 492 ~~lpet~ 498 (505)
T TIGR00898 492 LFLPETK 498 (505)
T ss_pred HcCcCCC
Confidence 7888874
No 202
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.16 E-value=8.8e-10 Score=106.86 Aligned_cols=173 Identities=12% Similarity=0.000 Sum_probs=117.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHH
Q 010212 297 IGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLM 376 (515)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~ 376 (515)
+.+...++..++.........|.+.++.+.++.+.+ .......++..++.+..+++.||+|||+.+..
T Consensus 6 ~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g------------~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~ 73 (410)
T TIGR00885 6 ALITSLFALWGFANDITNPMVPQFQQAFTLTAFQAA------------LVQSAFYGGYFIMAIPAAIFMKKLSYKAGILL 73 (410)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHhCchHHHHH
Confidence 344445555555555555677777777776554422 26677778888899999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHH
Q 010212 377 GFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAF 456 (515)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~ 456 (515)
+..+.+++..++..... ..++.......+..+.......+....++.+..|++++++..++.+....+|..++|.
T Consensus 74 g~~l~~~g~~l~~~~~~-----~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~ 148 (410)
T TIGR00885 74 GLFLYALGAFLFWPAAE-----IMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMV 148 (410)
T ss_pred HHHHHHHHHHHHHHHHh-----hccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998888776543221 0122222222233333322234445566778889999999999999999999999999
Q ss_pred HHHHhhhc--------------------------cCchHHHHHHHHHHHHHHHHHH
Q 010212 457 GFLYLADT--------------------------SGVKKALLILGGANFLGMLFTF 486 (515)
Q Consensus 457 ~~~~l~~~--------------------------~g~~~~~~~~~~~~~~~~~~~~ 486 (515)
+.+.+... .+|+.+|.+.+++.++..++..
T Consensus 149 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~ 204 (410)
T TIGR00885 149 VAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIM 204 (410)
T ss_pred HHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98877532 3588888888776666554443
No 203
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.16 E-value=4.8e-10 Score=91.26 Aligned_cols=130 Identities=17% Similarity=0.179 Sum_probs=97.7
Q ss_pred HHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccc
Q 010212 350 ALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAE 429 (515)
Q Consensus 350 ~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (515)
..++.+++.+..+++.||+|||+.+..+.....++.+...... +.+ ......+..+.......+....+..|
T Consensus 7 ~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~ 78 (141)
T TIGR00880 7 YALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSS-------NIT-VLIIARFLQGFGAAFALVAGAALIAD 78 (141)
T ss_pred ehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhc-------cHH-HHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 3455667788899999999999999888777777766554432 122 22222333333333345667778899
Q ss_pred cCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHHh
Q 010212 430 IFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSGVKKALLILGGANFLGMLFTFL 487 (515)
Q Consensus 430 ~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 487 (515)
..|+++|++++++.+....++..++|.+.+.+.+..+|+..+.+.+.+.+++.+..++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (141)
T TIGR00880 79 IYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAF 136 (141)
T ss_pred HCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999889988888887777777666553
No 204
>PRK15075 citrate-proton symporter; Provisional
Probab=99.16 E-value=2.8e-09 Score=104.69 Aligned_cols=139 Identities=14% Similarity=0.138 Sum_probs=96.3
Q ss_pred hhHHHHHHhhhhh-hhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHH-hh
Q 010212 39 LFCISLVTKLLGR-IYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLA-SG 116 (515)
Q Consensus 39 ~~~~~~~~~~i~~-~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~-~~ 116 (515)
........|.+.+ .+ |.+..+.++....+.++..++.+++|+++||+|||+++..+..+..+..+. ..
T Consensus 254 ~~~~~~~~p~~l~~~~----------g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~ 323 (434)
T PRK15075 254 FYLITVYTPTFGKTVL----------HLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALS 323 (434)
T ss_pred HHHHHHHHHHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 3334445566544 46 888888999999999999999999999999999999987765544332221 11
Q ss_pred -hcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHH-HHHHHHHHHHHHHHHHHHhhh
Q 010212 117 -LSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFA-MQGFGILSGGMVAIIVSAAFK 191 (515)
Q Consensus 117 -~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~-~~~~G~~~g~~l~~~l~~~~~ 191 (515)
...+. .+..+.+..++.|++.+...+....++.|.+|+++|++..++... +..++..++|.+.+.+.+..+
T Consensus 324 ~~~~~~----~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g 396 (434)
T PRK15075 324 WLVAAP----SFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTG 396 (434)
T ss_pred HHHcCC----chHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcC
Confidence 11111 033444455556666666666677889999999999999998544 444557778988888875543
No 205
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.14 E-value=3.8e-09 Score=102.35 Aligned_cols=145 Identities=14% Similarity=0.035 Sum_probs=106.6
Q ss_pred CCchhHHHHHHHHHH-HHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccc
Q 010212 64 TLPDNVASAVNGVAL-CGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIG 142 (515)
Q Consensus 64 ~~s~~~~g~~~s~~~-l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g 142 (515)
|.+.++.|++..... ....++.++.|++.||+|+|+.+..+..+.++..+......+.........++....+.+++.+
T Consensus 239 G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 318 (390)
T TIGR02718 239 GWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITG 318 (390)
T ss_pred CCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHH
Confidence 899999999988876 4667789999999999999999888776663333322211110000003444555666677777
Q ss_pred cccchhhHhhhhcccc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHH
Q 010212 143 GDYPLSATIMSEYANK-KTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMF 221 (515)
Q Consensus 143 ~~~~~~~~~i~e~~~~-~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~ 221 (515)
...+...+.+.+..++ +++++.+++.+...++|..+||.+++.+.+.. ||+..|++
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~-----------------------G~~~~f~~ 375 (390)
T TIGR02718 319 ITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRF-----------------------GYAGGFLS 375 (390)
T ss_pred HHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------ccHHHHHH
Confidence 7778888888788776 78999999999999999999999999997543 48888888
Q ss_pred hHHHHHHHHH
Q 010212 222 GAIPALLTYY 231 (515)
Q Consensus 222 ~~~~~~~~~~ 231 (515)
.++..++..+
T Consensus 376 ~~~~~l~a~~ 385 (390)
T TIGR02718 376 GTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHH
Confidence 7766665443
No 206
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.11 E-value=2.8e-09 Score=97.97 Aligned_cols=173 Identities=13% Similarity=0.081 Sum_probs=121.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHH
Q 010212 295 HLIGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQ 374 (515)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~ 374 (515)
.++.............+......+.+-++.+.++.+... +..+..+...+.++..|.+.||+|.|++.
T Consensus 15 ~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~l------------l~aiPil~GallRl~~g~l~drfGgR~~~ 82 (417)
T COG2223 15 NLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGL------------LVAIPILVGALLRLPYGFLTDRFGGRKWT 82 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHH------------HHHHHHHHhHHHHHHHHhhhcccCchHHH
Confidence 344444444444444444444455554556666655332 55556666777899999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHH
Q 010212 375 LMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVG 454 (515)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~ 454 (515)
..+.++..+-.+.+.+....+ +. +..+...++.+..+ +...+...++++.+|+|++|.++|+.. .+|+|..+.
T Consensus 83 ~~s~~l~~IP~~~~~~a~~~~----~~-~~ll~~gll~G~~G-asFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~ 155 (417)
T COG2223 83 ILSMLLLLIPCLGLAFAVTYP----ST-WQLLVIGLLLGLAG-ASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVA 155 (417)
T ss_pred HHHHHHHHHHHHHHHHHccCC----ch-HHHHHHHHHHhccc-ceehcccccccccCChhhhhHHHHHhc-cccccHHHH
Confidence 999888888777777655211 12 23333333333333 345677789999999999999999999 999999999
Q ss_pred HHHHHHhhhccC---chHHHHHHHHHHHHHHHHHH
Q 010212 455 AFGFLYLADTSG---VKKALLILGGANFLGMLFTF 486 (515)
Q Consensus 455 ~~~~~~l~~~~g---~~~~~~~~~~~~~~~~~~~~ 486 (515)
..+.+.+....| |+.+..+.....++..+..+
T Consensus 156 q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~ 190 (417)
T COG2223 156 QLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAW 190 (417)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998888 88888887777777666665
No 207
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.10 E-value=5.2e-09 Score=97.22 Aligned_cols=117 Identities=13% Similarity=0.187 Sum_probs=96.4
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhcccc
Q 010212 64 TLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGG 143 (515)
Q Consensus 64 ~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 143 (515)
+.++++.++..+.+..+..++.+..+++.||+|+||++.++..+..++.++....++ ... ..+-++.|++.+.
T Consensus 174 g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~------~~~-~~~~~l~g~~~s~ 246 (310)
T TIGR01272 174 GLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHG------YVA-MWFVLALGLFNSI 246 (310)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCC------HHH-HHHHHHHHHHHHH
Confidence 889999999999999999999999999999999999998888888887766666554 222 2355588999999
Q ss_pred ccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 010212 144 DYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAA 189 (515)
Q Consensus 144 ~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~ 189 (515)
.+|...+...+..|++ .+++.++. ....+|.+++|++.|.+.+.
T Consensus 247 i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad~ 290 (310)
T TIGR01272 247 MFPTIFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLADC 290 (310)
T ss_pred HHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHHh
Confidence 9999999999988764 45666765 45668999999998888643
No 208
>PRK09848 glucuronide transporter; Provisional
Probab=99.08 E-value=8.1e-09 Score=101.96 Aligned_cols=125 Identities=11% Similarity=0.001 Sum_probs=101.5
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhcccc
Q 010212 64 TLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGG 143 (515)
Q Consensus 64 ~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 143 (515)
+.+....++......++..++.++++++.||+|+|+++.++.++.+++.++..+.+.. .++.+++..++.|+|.+.
T Consensus 260 g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~----~~~~~~~~~~l~g~G~~~ 335 (448)
T PRK09848 260 NDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVW----SLPVALVALAIASIGQGV 335 (448)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCch----hHHHHHHHHHHHHHHHHH
Confidence 5555555555555567788899999999999999999999999988888877765421 156677788899999999
Q ss_pred ccchhhHhhhhccccc-------cchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 010212 144 DYPLSATIMSEYANKK-------TRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKA 192 (515)
Q Consensus 144 ~~~~~~~~i~e~~~~~-------~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~ 192 (515)
..+...++..|..|.+ ++|...++.+....+|..+|+.+.+.+.+..+.
T Consensus 336 ~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 336 TMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999988754 358889999999999999999999988776653
No 209
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.06 E-value=2.1e-08 Score=97.58 Aligned_cols=140 Identities=17% Similarity=0.154 Sum_probs=99.1
Q ss_pred CCchhHHHHHHHHH-HHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHh---hhcCCCCchhHHHHHHHHH----H
Q 010212 64 TLPDNVASAVNGVA-LCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLAS---GLSFGKEPKAVMITLCFFR----F 135 (515)
Q Consensus 64 ~~s~~~~g~~~s~~-~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~---~~~~~~~~~~~~~~l~~~r----~ 135 (515)
|.+.++.+++.+.. .++..++.+++|++.||+|||+.+..+..+..+..+.. ++.++. .+.+++.- +
T Consensus 241 G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~-----~~~~~~~~~~~~~ 315 (402)
T PRK11902 241 GFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKH-----LWTMALAIGIENL 315 (402)
T ss_pred CCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCc-----HHHHHHHHHHHHH
Confidence 89999999998665 45689999999999999999998877777666554433 343321 45555444 4
Q ss_pred HhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchH
Q 010212 136 WLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIW 215 (515)
Q Consensus 136 l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~w 215 (515)
..|++.+...+....++.+.+|.+++ ++.+...++|..+++.+++.+.+. .||
T Consensus 316 ~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~G~l~~~-----------------------~G~ 368 (402)
T PRK11902 316 CGGMGTAAFVALLMALCNRSFSATQY----ALLSALASVGRVYVGPTSGYLVEA-----------------------YGW 368 (402)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcHHHH----HHHHHHHHHHHHHHHHHHHHHHHH-----------------------hCh
Confidence 45566666677777777777776554 445555567777677788888644 459
Q ss_pred HHHHHHhHHHHHHHHHHHHh
Q 010212 216 RIILMFGAIPALLTYYWRMK 235 (515)
Q Consensus 216 r~~f~~~~~~~~~~~~~~~~ 235 (515)
+..|.+.++.+++.++..+.
T Consensus 369 ~~~f~~~~~~~~~~~~~~~~ 388 (402)
T PRK11902 369 PGFYLMTVVIALPGLALLWL 388 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999988887776555433
No 210
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.04 E-value=6.9e-09 Score=102.99 Aligned_cols=123 Identities=10% Similarity=0.040 Sum_probs=97.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhc---CCCCchhHHHHHHHHHHHhhhccc
Q 010212 66 PDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLS---FGKEPKAVMITLCFFRFWLGFGIG 142 (515)
Q Consensus 66 s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~---~~~~~~~~~~~l~~~r~l~G~~~g 142 (515)
+....+++.+...++..++.+++++++||+|+|+.+..+..+..++.+...+. .. +..+.+++.-++.|++.+
T Consensus 264 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~i~~~l~g~~~~ 339 (473)
T PRK10429 264 DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAP----HNALLIVIAGILLNIGTA 339 (473)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCc----hhHHHHHHHHHHHHHHHH
Confidence 35566777777778899999999999999999999998888777666554331 11 115667778888999999
Q ss_pred cccchhhHhhhhccc-------cccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 010212 143 GDYPLSATIMSEYAN-------KKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKA 192 (515)
Q Consensus 143 ~~~~~~~~~i~e~~~-------~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~ 192 (515)
...+...++++|..+ +++.|..++......-+|..+++.+.+.+.+..+.
T Consensus 340 ~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 340 LFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 989999999999966 33345688999999999999999999998876663
No 211
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.04 E-value=3.5e-09 Score=107.85 Aligned_cols=169 Identities=13% Similarity=-0.002 Sum_probs=123.4
Q ss_pred HHHhhhhhHHHhHhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHh
Q 010212 311 YSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAI 390 (515)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~ 390 (515)
.......+.+-++.++++.+.+. +.....++..++.++.+++.||.+||+.+.++.++.+++.++.++
T Consensus 50 g~~~~~l~~iek~F~lss~~~G~------------i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~al 117 (633)
T TIGR00805 50 GLVNSSLTTIERRFKLSTSSSGL------------INGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSL 117 (633)
T ss_pred HHHHhhchhhhhhhCCCCCccee------------eeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhC
Confidence 33444556666677777777555 556667777788889999999999999999999999999988877
Q ss_pred hhhccc------------------------C-----------------C--CchHHHHHHHHHHHHHhhcCccccccccc
Q 010212 391 PYHHWT------------------------L-----------------P--DHRIGFVVLYSLTFFFSNFGPNTTTFVVP 427 (515)
Q Consensus 391 ~~~~~~------------------------~-----------------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (515)
...... . . ...+..+++.-++.+.+.....+...+++
T Consensus 118 phf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i 197 (633)
T TIGR00805 118 PHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYI 197 (633)
T ss_pred hHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhh
Confidence 642100 0 0 00123334445555565666677888999
Q ss_pred cccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhcc----------------------CchHHHHHHHHHHHHHHHHH
Q 010212 428 AEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTS----------------------GVKKALLILGGANFLGMLFT 485 (515)
Q Consensus 428 ~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~----------------------g~~~~~~~~~~~~~~~~~~~ 485 (515)
.|.+|++.|+...|+.+....+|..+|+.+.+.+.+.+ +|+..|++.+++.++..+..
T Consensus 198 ~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l 277 (633)
T TIGR00805 198 DDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPF 277 (633)
T ss_pred hccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999887532 25667877777777766655
Q ss_pred Hhcccc
Q 010212 486 FLVPES 491 (515)
Q Consensus 486 ~~~~~~ 491 (515)
++++++
T Consensus 278 ~~~p~~ 283 (633)
T TIGR00805 278 FFFPKA 283 (633)
T ss_pred HhCccc
Confidence 555554
No 212
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.04 E-value=8.7e-07 Score=89.78 Aligned_cols=165 Identities=10% Similarity=0.073 Sum_probs=126.6
Q ss_pred HHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhhHHHHHHHHHHHHHHHhhhcCCC
Q 010212 43 SLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDK-MGRKRVYGMTLMMMVICSLASGLSFGK 121 (515)
Q Consensus 43 ~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr-~Grr~~l~~~~~~~~i~~~~~~~~~~~ 121 (515)
..++..+.+.+ +.+.+....+...+....-+..+++|+++|+ +||++.+.++.++..++.++.++....
T Consensus 8 aiLvlYl~~~l----------g~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~ 77 (654)
T TIGR00926 8 TILVLYFLNFL----------GFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIP 77 (654)
T ss_pred HHHHHHHHHHc----------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCc
Confidence 34445555566 8899999999999999999999999999996 899999999999999999888775321
Q ss_pred Cc--hhHHHHHHHHHHHhhhccccccchhhHhhhhccccc---cchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCC
Q 010212 122 EP--KAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKK---TRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFPA 196 (515)
Q Consensus 122 ~~--~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~---~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~~ 196 (515)
.. .......+++-.+..+|.|+.-+...+...|.++++ +|-..+.++..+.++|.++++++...+....+.
T Consensus 78 ~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~---- 153 (654)
T TIGR00926 78 SSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGC---- 153 (654)
T ss_pred ccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc----
Confidence 00 111234667788888999999999999999999754 366778888999999999999888887533210
Q ss_pred CccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHH
Q 010212 197 PIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWR 233 (515)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~ 233 (515)
.....+|...|.+.++..++.++..
T Consensus 154 ------------fg~~~~~~~aF~i~~i~m~ia~lvf 178 (654)
T TIGR00926 154 ------------FGCQDCYPLAFGVPAILMILALIVF 178 (654)
T ss_pred ------------cccCcchHHHHHHHHHHHHHHHHHH
Confidence 0124569999999888777765554
No 213
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.03 E-value=2.2e-08 Score=94.85 Aligned_cols=158 Identities=9% Similarity=0.015 Sum_probs=116.0
Q ss_pred HhhhhhHHHhHhcccCCc-ccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhh
Q 010212 313 QNLFQKDIFTAIGWIPKA-KTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIP 391 (515)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~ 391 (515)
.....|.+.++.|+++.+ .+. .......+..+..+.+|++.||+|.|+++..+.+...+..+++++.
T Consensus 45 ~s~a~p~L~~elglT~~qv~G~------------I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa 112 (511)
T TIGR00806 45 ESFITPYLLTVLNFTEETVTNE------------IIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLG 112 (511)
T ss_pred HHHHHHHHHHHcCCCHHHhcch------------HHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH
Confidence 444566677778888776 444 5566666777788899999999999999999999888888888775
Q ss_pred hhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCchHHH
Q 010212 392 YHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSGVKKAL 471 (515)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~~~~ 471 (515)
. ....+.+.=++.+.+..... ....++...+|+++|+++.|+.+....+|.++++.+.+. ....||+...
T Consensus 113 ~--------Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~ 182 (511)
T TIGR00806 113 T--------SVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYS 182 (511)
T ss_pred H--------HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHH
Confidence 4 23344444444455544444 667888999999999999999999999999999999999 4567776543
Q ss_pred ---HHHHHHHHHHHHHHHhccccC
Q 010212 472 ---LILGGANFLGMLFTFLVPESK 492 (515)
Q Consensus 472 ---~~~~~~~~~~~~~~~~~~~~~ 492 (515)
++..+...++.++.+++|..+
T Consensus 183 ~Ln~Isl~s~~~a~~~a~~LP~~~ 206 (511)
T TIGR00806 183 TLNIISLVFMTFSVFLALFLKRPK 206 (511)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCc
Confidence 333444455555566777443
No 214
>PRK10133 L-fucose transporter; Provisional
Probab=99.03 E-value=1.2e-08 Score=99.93 Aligned_cols=150 Identities=11% Similarity=-0.065 Sum_probs=102.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHH
Q 010212 296 LIGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQL 375 (515)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~ 375 (515)
+......++...+.........|.+-++.+.++.+.+. ......++..++.+..|++.||+|||+.+.
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl------------~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~ 95 (438)
T PRK10133 28 FALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGL------------IQSAFYFGYFIIPIPAGILMKKLSYKAGII 95 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhCcHHHHH
Confidence 44455555666666777778888887777766544332 566777888888999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHH
Q 010212 376 MGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGA 455 (515)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~ 455 (515)
.+..+..++.+++..... .+++.......+..+.+.....+....++.|..|++.|...+++.+....+|..+++
T Consensus 96 ~g~~~~~~~~~l~~~~~~-----a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~ 170 (438)
T PRK10133 96 TGLFLYALGAALFWPAAE-----IMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAV 170 (438)
T ss_pred HHHHHHHHHHHHHHHHHh-----cCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHH
Confidence 999998888876532110 012333333333333333333445556667877777776789999999999999999
Q ss_pred HHHHHhh
Q 010212 456 FGFLYLA 462 (515)
Q Consensus 456 ~~~~~l~ 462 (515)
.+.+.+.
T Consensus 171 ~~g~~l~ 177 (438)
T PRK10133 171 VFGQSLI 177 (438)
T ss_pred HHHHHHH
Confidence 8877654
No 215
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.03 E-value=2.7e-08 Score=93.57 Aligned_cols=147 Identities=11% Similarity=0.098 Sum_probs=121.8
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhcccc
Q 010212 64 TLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGG 143 (515)
Q Consensus 64 ~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 143 (515)
+.++...|.+.+...+.-++.-.+..++.+|+|.|+.++++..++.+=.++++++++ .+.+.+.+.+.|+-.+.
T Consensus 255 ~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~------~~~i~~~klLH~~e~~l 328 (412)
T PF01306_consen 255 GQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATN------PWVISLIKLLHALEFPL 328 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--S------HHHHHHHHHHHHHHHHH
T ss_pred ccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcc------hHHHHHHHHHHHHHHHH
Confidence 456677999999999999999999999999999999999999999999999999999 89999999999999999
Q ss_pred ccchhhHhhhhccccccchhHHHH-HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHh
Q 010212 144 DYPLSATIMSEYANKKTRGAFIAA-VFAMQGFGILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFG 222 (515)
Q Consensus 144 ~~~~~~~~i~e~~~~~~r~~~~~~-~~~~~~~G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~ 222 (515)
.......|+++.+|+|..++...+ .+...++|..+.+.++|.+.+. .|.+..|++.
T Consensus 329 ~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~-----------------------~G~~~tylim 385 (412)
T PF01306_consen 329 LLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDR-----------------------IGFQHTYLIM 385 (412)
T ss_dssp HHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHH-----------------------HHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhh-----------------------cCcHHHHHHH
Confidence 999999999999999988777777 4688899999999999999644 4588888875
Q ss_pred HHHHHH-HHHHHHhcCCc
Q 010212 223 AIPALL-TYYWRMKMPET 239 (515)
Q Consensus 223 ~~~~~~-~~~~~~~~~e~ 239 (515)
+...++ .++..+.+++.
T Consensus 386 g~iv~~~~li~~f~l~~~ 403 (412)
T PF01306_consen 386 GLIVLPFTLISAFTLKKD 403 (412)
T ss_dssp HHHHHHHHHHHHHHS--S
T ss_pred HHHHHHHHHHheeeecCC
Confidence 555544 45555556544
No 216
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.02 E-value=2.9e-08 Score=95.34 Aligned_cols=167 Identities=17% Similarity=0.126 Sum_probs=120.9
Q ss_pred hHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhcC
Q 010212 40 FCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLSF 119 (515)
Q Consensus 40 ~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~ 119 (515)
..+......+-++- |++..+..+.+....+...+..+++..+.||+|||+.++.+..+..+..+++....
T Consensus 287 ~ai~~Yst~i~~~a----------G~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~ 356 (485)
T KOG0569|consen 287 NAIFFYSTSIFKTA----------GFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIAL 356 (485)
T ss_pred ceeHHHHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 34445556666666 89999999999999999999999999999999999999999999988887776543
Q ss_pred CCCchh-HH--HHHHHHHHHhh--hccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 010212 120 GKEPKA-VM--ITLCFFRFWLG--FGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANF 194 (515)
Q Consensus 120 ~~~~~~-~~--~~l~~~r~l~G--~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~ 194 (515)
...... .+ +..+++.++-. ++.|. -|...-+.+|.+|++.|..++++.....-+...+-...-..+.+..+
T Consensus 357 ~l~~~~~~~~~y~~i~~~~~~~~~f~~G~-gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g--- 432 (485)
T KOG0569|consen 357 FLSNSFGSWLSYLCIAAIFLFIISFAIGP-GPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIG--- 432 (485)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHhhhcCC-CchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---
Confidence 211101 01 12233444333 34443 48888899999999999999999888888887777776666654433
Q ss_pred CCCccCCCCCCccccCCCchHHHHHHHhHHHHHH-HHHHHHhcCCchh
Q 010212 195 PAPIYSANPAASTVPEADYIWRIILMFGAIPALL-TYYWRMKMPETAR 241 (515)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~-~~~~~~~~~e~p~ 241 (515)
- +.|++..+++++ .+..++.+||+..
T Consensus 433 --------------------~-~~filF~i~~~~~~i~~~~~lPETkg 459 (485)
T KOG0569|consen 433 --------------------P-YVFILFVIPLAIFLIYLYRYLPETKG 459 (485)
T ss_pred --------------------c-hhhHHHHHHHHHHHHHHHHhCcccCC
Confidence 2 566666666555 4556788999853
No 217
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.02 E-value=8.5e-09 Score=114.44 Aligned_cols=118 Identities=16% Similarity=0.142 Sum_probs=107.7
Q ss_pred CCchh-HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccc
Q 010212 64 TLPDN-VASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIG 142 (515)
Q Consensus 64 ~~s~~-~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g 142 (515)
+.+.. +.+++.+...++..+++++.|+++||+++|+++.++.++.+++.++..+..+ .+.++++.++.|++.+
T Consensus 264 g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~ 337 (1146)
T PRK08633 264 GLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPS------LASVLVLFFLFGFSAG 337 (1146)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhh------HHHHHHHHHHHHHHHH
Confidence 88888 9999999999999999999999999999999999988888888888887777 6888888999999999
Q ss_pred cccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 010212 143 GDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVS 187 (515)
Q Consensus 143 ~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~ 187 (515)
...+...+++.+..|+++||+++++.+....+|.++++.+++.+.
T Consensus 338 ~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~ 382 (1146)
T PRK08633 338 LFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFS 382 (1146)
T ss_pred HhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 988999999999999999999999999999999988888887764
No 218
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.01 E-value=8e-09 Score=98.72 Aligned_cols=133 Identities=11% Similarity=0.081 Sum_probs=106.0
Q ss_pred HHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhh-hhhhHHHHHHHHHHHHHHHhhhcCC
Q 010212 42 ISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKM-GRKRVYGMTLMMMVICSLASGLSFG 120 (515)
Q Consensus 42 ~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~-Grr~~l~~~~~~~~i~~~~~~~~~~ 120 (515)
.....|.+.++. +.+..+.+.+.+...++..+++++.|++.||+ +||+.+..+..+.+++.+...+.++
T Consensus 216 ~~~~lp~~~~~~----------g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (355)
T TIGR00896 216 LIGWLPAILISH----------GASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPM 285 (355)
T ss_pred HHHHHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhh
Confidence 344566666677 88999999999999999999999999999999 5666777888888888777777655
Q ss_pred CCchhHHHHHHHHHHHhhhccccccchhhHhhhhccc-cccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 010212 121 KEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYAN-KKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFK 191 (515)
Q Consensus 121 ~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~-~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~ 191 (515)
.... ..-++.|++.+...+...+.+.+..+ +++++...++.+....+|..++|.+.+.+.+..+
T Consensus 286 ------~~~~-~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 286 ------HGLW-AWALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred ------hHHH-HHHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 1222 24567899999888888787766554 5667888999888888999999999999987655
No 219
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.00 E-value=9.5e-09 Score=99.71 Aligned_cols=184 Identities=13% Similarity=-0.009 Sum_probs=115.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHH----hhchh
Q 010212 296 LIGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALID----KIGRF 371 (515)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d----~~g~~ 371 (515)
++.+....+...+.+.....+.+.+++..|.++.. .........+..++..++.|+++| |+|||
T Consensus 6 li~~~~~~~Giq~~~~l~~~~l~~yl~~lg~~~~~------------~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRR 73 (477)
T TIGR01301 6 LLRVASVAAGVQFGWALQLSLLTPYVQELGIPHAW------------ASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRR 73 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------------HHHHHHHHHHHHHHHHhHeeehhcCCCCCCCCh
Confidence 34444444455556666666777787777765533 222556666777888899999999 59999
Q ss_pred hHHHHH-HHHHHHHHHHHHhhhhccc------CCCc-hH---HHHHHHHHHHHHhhcCccccccccccccCchhhh--hh
Q 010212 372 AIQLMG-FFFMTVFMFALAIPYHHWT------LPDH-RI---GFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLR--ST 438 (515)
Q Consensus 372 ~~~~~~-~~~~~~~~~~~~~~~~~~~------~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~--~~ 438 (515)
+.++.. .....+++.++........ .... .+ ..+..+.+.....+. ..+...+++.|..|+++| +.
T Consensus 74 rp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~-~~~p~rALiaDl~p~~~~~~~~ 152 (477)
T TIGR01301 74 RPFIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNM-LQGPCRAFLADLTGGDARRTRI 152 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHH-HHHHHHHhcccccCchhHHHHH
Confidence 988764 4555555555544321110 0001 11 111122222222222 334556889999998765 67
Q ss_pred hhHHHHHHhhhhHHHHHHHHHHh--hhc-------------cCchHHHHHHHHHHHHHHHHHH-hccccC
Q 010212 439 CHGISAASGKAGAIVGAFGFLYL--ADT-------------SGVKKALLILGGANFLGMLFTF-LVPESK 492 (515)
Q Consensus 439 ~~g~~~~~~~~g~~i~~~~~~~l--~~~-------------~g~~~~~~~~~~~~~~~~~~~~-~~~~~~ 492 (515)
++++.+...++|+.+++.+.+.. .+. .+++..|++.+++.+++.+... ..+|..
T Consensus 153 a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 153 ANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENP 222 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccC
Confidence 99999999999999999988865 221 1467788888777777777766 567754
No 220
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.00 E-value=2.3e-09 Score=105.32 Aligned_cols=176 Identities=16% Similarity=0.227 Sum_probs=151.1
Q ss_pred HHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhh--hhhHH
Q 010212 24 AIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMG--RKRVY 101 (515)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~G--rr~~l 101 (515)
......++..+......+....+|...++. +.++.+.+.+.++..+...++.++.|+++|+.. ++.+.
T Consensus 299 ~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~----------g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~ 368 (509)
T KOG2504|consen 299 KFLLLALSNLFAYLGFNVPFVYLPSYAKSL----------GLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLF 368 (509)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhc----------CCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHH
Confidence 344555555666666677777888888888 999999999999999999999999999999988 55678
Q ss_pred HHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHH
Q 010212 102 GMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGM 181 (515)
Q Consensus 102 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~ 181 (515)
.+++++.+++.+.++++++ ++.++..-.+.|++.|.........+.|..+.++-..+.|+.....+++.++||+
T Consensus 369 ~~~ll~~gl~~~~~p~~~~------~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpP 442 (509)
T KOG2504|consen 369 LLTLLIAGLARLFLPFATT------YVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPP 442 (509)
T ss_pred HHHHHHHHHHHHHHHHhcc------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcc
Confidence 8889999999999999999 8999999999999999988888889999999999999999999999999999999
Q ss_pred HHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhcC
Q 010212 182 VAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKMP 237 (515)
Q Consensus 182 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~ 237 (515)
+++.+.+..++ |...|+..++..++....++..+
T Consensus 443 iag~~~d~tg~----------------------Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 443 IAGLLYDITGN----------------------YDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred cceeeeeccCC----------------------eeeehhhcChHHHHHHHHHHHhH
Confidence 99987644432 89999998888777766665555
No 221
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.99 E-value=8.2e-09 Score=98.71 Aligned_cols=123 Identities=11% Similarity=0.018 Sum_probs=96.2
Q ss_pred HHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHH-HHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhcC
Q 010212 41 CISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVAL-CGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLSF 119 (515)
Q Consensus 41 ~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~-l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~ 119 (515)
......|...+++ |.+.++.+.+.+... ++..++.+++|++.||+|||+.+..+.++.+++..+..+..
T Consensus 227 ~~~~~~~~~l~~~----------g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~ 296 (356)
T TIGR00901 227 AATVLTTLFLLDM----------GFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLA 296 (356)
T ss_pred HHHHHHHHHHHHc----------CCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344555555557 899999998887766 67889999999999999999999888888877766555431
Q ss_pred -CCC----chhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHH
Q 010212 120 -GKE----PKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQG 173 (515)
Q Consensus 120 -~~~----~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~ 173 (515)
+.+ .....+.++.+.++.+++.+...+...+++.|.+|+++||+.+++.+...+
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 297 SNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred hcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 100 000157788889999999999999999999999999999999999877554
No 222
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=98.99 E-value=1e-06 Score=84.08 Aligned_cols=380 Identities=12% Similarity=0.045 Sum_probs=185.9
Q ss_pred HHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHH
Q 010212 27 IAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLM 106 (515)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~ 106 (515)
.+....++...+.-++....+....+.++ -+---.+...-.-.+...+..+..|.+.||..|.+++..+.+
T Consensus 6 ~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p---------~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~ 76 (432)
T PF06963_consen 6 RLYLSHFLSTWGDRMWEFAVPLFLISIFP---------GSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLV 76 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcC---------CCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHH
Confidence 34445555555555666666666666522 122233444444556778889999999999999998877766
Q ss_pred HHHHHHHHhh------hcCCCCc---hhHHHHHHHHHHHhhhccccc-cchhhHhhhhcc------ccccchhHHHHHHH
Q 010212 107 MMVICSLASG------LSFGKEP---KAVMITLCFFRFWLGFGIGGD-YPLSATIMSEYA------NKKTRGAFIAAVFA 170 (515)
Q Consensus 107 ~~~i~~~~~~------~~~~~~~---~~~~~~l~~~r~l~G~~~g~~-~~~~~~~i~e~~------~~~~r~~~~~~~~~ 170 (515)
..-++..+++ +...... ......+++.-.+.|.-.-.. .....+.=.||. +++.+.+..+.+--
T Consensus 77 ~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRR 156 (432)
T PF06963_consen 77 VQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRR 156 (432)
T ss_pred HHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHH
Confidence 5533332222 1111100 011222233222333211111 111222223443 34445566666666
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHH-Hh----cCCchhhHHH
Q 010212 171 MQGFGILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWR-MK----MPETARYTAL 245 (515)
Q Consensus 171 ~~~~G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~-~~----~~e~p~~~~~ 245 (515)
.--+.-+++|++.+.+... .+.+....+.+...++.++.= ++ ....|. +
T Consensus 157 IDL~ckllaPl~vG~l~t~-----------------------~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~---L 210 (432)
T PF06963_consen 157 IDLFCKLLAPLFVGLLMTF-----------------------ASPVIAAIFIAGWNLASVFVEYFLLARVYNSVPA---L 210 (432)
T ss_pred HHHHHHHHHHHHHHHHhhc-----------------------cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH---h
Confidence 6778899999999998633 446666665555554433321 11 122222 1
Q ss_pred HhccHHHHHHHHHHHHHhhhhHhhhhHHHhhc---CCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHh
Q 010212 246 VAKNAKQAAADMSKVLQVELEAEQEKVEQEKG---KNDFGLFSAKFVRRHGLHLIGTTVTWFLLDVAYYSQNLFQKDIFT 322 (515)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (515)
..+++++..+..++..+.+.+.......++.. .+.++.++.....+-...-+...+.++. .-+....+..|..
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~Y~~q~vflas~alalLY~T----VLsf~~lmt~yl~ 286 (432)
T PF06963_consen 211 AVKKRSSESESSSDEESSSESSSDPSILKRLWNPLRTIIRGWRTYFRQPVFLASFALALLYFT----VLSFGGLMTAYLK 286 (432)
T ss_pred cCCCCCccccccccccccccccchhhHHHHHHHHHHHHhccHHHHHhCHHHHHHHHHHHHHHH----HhcCcHHHHHHHH
Confidence 11111110000000000000000000000000 0001111111111111112222222222 2222334445566
Q ss_pred HhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCC--Cc
Q 010212 323 AIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLP--DH 400 (515)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 400 (515)
..|+++...+. .-....+.++.|+++..++.+|+|..+.-.++......++.+..........+ ..
T Consensus 287 ~~G~s~~~igi------------~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~ 354 (432)
T PF06963_consen 287 SQGYSPSVIGI------------FRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSI 354 (432)
T ss_pred HCCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhh
Confidence 66776655333 44556677888999999999999998888888777766665555443222221 11
Q ss_pred hHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHH
Q 010212 401 RIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFG 457 (515)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~ 457 (515)
.....+...+..-.+-.++.-...-+.+|..|+++||+..|.-+...++...+.-.+
T Consensus 355 s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~ 411 (432)
T PF06963_consen 355 SAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVL 411 (432)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 122222222222233333444455677999999999999999999998877655443
No 223
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.98 E-value=2.1e-08 Score=95.97 Aligned_cols=173 Identities=13% Similarity=0.088 Sum_probs=131.0
Q ss_pred HHHHhhhHHHHHHhhhhhhhhccCCCCCCCC-CchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHH
Q 010212 34 TDAYDLFCISLVTKLLGRIYYYKEGSDSPGT-LPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICS 112 (515)
Q Consensus 34 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~ 112 (515)
+.+.....+....+...++. + .+....+.+.+...++-...-...+++..|+|.|+++.++.+.+++=.
T Consensus 218 l~~~~~~~~~~f~~~yl~~~----------gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~ 287 (400)
T PF03825_consen 218 LIGISHAAYYTFFSIYLQEL----------GGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRW 287 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHc----------ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 33433344444445445555 5 667778888888888889999999999999999999999999999988
Q ss_pred HHhhhc-CCCCchhHHHHH----HHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHH-HHHHHHHHHHHHHHHH
Q 010212 113 LASGLS-FGKEPKAVMITL----CFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFA-MQGFGILSGGMVAIIV 186 (515)
Q Consensus 113 ~~~~~~-~~~~~~~~~~~l----~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~-~~~~G~~~g~~l~~~l 186 (515)
.+.+.. ++ .+.. +....++|+..+........++.+..|++.|+++.+++.. ..++|..+|..++|++
T Consensus 288 ~l~a~~~~~------~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l 361 (400)
T PF03825_consen 288 LLYAYFSDP------WPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWL 361 (400)
T ss_pred HHHHHhcCC------cHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 888887 44 2333 3345679999999999999999999999999999999875 5689999999999999
Q ss_pred HHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHH-HHHhcCCc
Q 010212 187 SAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYY-WRMKMPET 239 (515)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~-~~~~~~e~ 239 (515)
.+..+. .....|...+.+.+...++..+ ...+.+|+
T Consensus 362 ~~~~g~-----------------~~~~~~~~~~~v~a~~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 362 YDAFGA-----------------RGMFDWSAVFLVFAVMALVILVLFVILFKPK 398 (400)
T ss_pred HHHhcc-----------------hhhhhHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 887663 2345577777776666555444 33445543
No 224
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.96 E-value=1.2e-08 Score=100.08 Aligned_cols=147 Identities=13% Similarity=0.187 Sum_probs=121.1
Q ss_pred HhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHH
Q 010212 30 MGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMV 109 (515)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~ 109 (515)
+..++............+...++.. +.+ ...+.+.....++..++.+++++++||+|+|+++..+..+.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~y~~~~vl---------~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~ 301 (428)
T PF13347_consen 232 LAFFLQWLAFALMNTFLPYYFTYVL---------GNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAA 301 (428)
T ss_pred HHHHHHHhhhhhhhhHHHHHHHHHh---------cCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHH
Confidence 3344444455555556666666551 232 567888889999999999999999999999999999999999
Q ss_pred HHHHHhhhcC--CCCchhHHHHHHHHHHHhhhccccccchhhHhhhhcccc-------ccchhHHHHHHHHHHHHHHHHH
Q 010212 110 ICSLASGLSF--GKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANK-------KTRGAFIAAVFAMQGFGILSGG 180 (515)
Q Consensus 110 i~~~~~~~~~--~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~-------~~r~~~~~~~~~~~~~G~~~g~ 180 (515)
++.++..+.+ + .+.+++.-++.|++.+.......++++|..+. ++.|...+.......+|..+++
T Consensus 302 ~~~~~~~~~~~~~------~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~ 375 (428)
T PF13347_consen 302 LGFLLLFFLGPGS------PWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAG 375 (428)
T ss_pred HHHHHHHHHHhhh------HHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHH
Confidence 9999988886 5 79999999999999999999999999998873 3358889999999999999999
Q ss_pred HHHHHHHHhhhc
Q 010212 181 MVAIIVSAAFKA 192 (515)
Q Consensus 181 ~l~~~l~~~~~~ 192 (515)
.+.+.+....+.
T Consensus 376 ~i~g~~l~~~Gy 387 (428)
T PF13347_consen 376 AIVGLLLALVGY 387 (428)
T ss_pred HHHHHHHHHhCc
Confidence 999988877664
No 225
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.95 E-value=5.6e-09 Score=94.20 Aligned_cols=113 Identities=15% Similarity=0.048 Sum_probs=89.0
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccc
Q 010212 342 IARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNT 421 (515)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (515)
.+........+...+.++..|.++||+|||.++..+.+..++...+.+... +....+..=+..+.+. +..+
T Consensus 69 yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~--------~F~afv~aR~l~Gi~k-gnl~ 139 (451)
T KOG2615|consen 69 YAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSR--------NFAAFVLARFLGGIFK-GNLS 139 (451)
T ss_pred hhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHhhhhcc-CchH
Confidence 344477778888999999999999999999999999888888777766544 2222222123333333 3456
Q ss_pred cccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhh
Q 010212 422 TTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLAD 463 (515)
Q Consensus 422 ~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~ 463 (515)
+..++++|++++++|+.+++.++....+|.++||.+.|++..
T Consensus 140 v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 140 VIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 778999999999999999999999999999999999999976
No 226
>PTZ00207 hypothetical protein; Provisional
Probab=98.95 E-value=3e-08 Score=98.37 Aligned_cols=167 Identities=10% Similarity=0.083 Sum_probs=105.3
Q ss_pred HHHHHHHHhhhhhHHHhHhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHH
Q 010212 306 LDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFM 385 (515)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~ 385 (515)
.....|....+.+.+.++.|++..+.+. +.. ...... ...+..|++.||+|+|+++.++.++..++.
T Consensus 39 ~~g~~y~fsv~s~~L~~~lgls~~~l~~-----------i~s-vg~~~g-~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ 105 (591)
T PTZ00207 39 CTSFMYAFNLISGAMQARYNLTQRDLST-----------ITT-VGIAVG-YFLLPYSFIYDYLGPRPIFVLSMTVFCLGT 105 (591)
T ss_pred HHHHHHHHHHHHHHHHHHhCcCHHHHHH-----------HHH-HHHHHH-HHHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 3445567778888888888877654221 111 111122 244568999999999999999999999999
Q ss_pred HHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhcc
Q 010212 386 FALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTS 465 (515)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~ 465 (515)
++.++...... ..+.+.+.+...+.+.+.....+.....+.+.+| ++||.+.|+......+|+++.+.+...+.. .
T Consensus 106 ll~ala~~~~i--~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~ 181 (591)
T PTZ00207 106 LLFALTFQEVI--EGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS-D 181 (591)
T ss_pred HHHHHHhcccc--cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 88877531100 0122222222223333332233444556678887 789999999999999999865555544443 3
Q ss_pred CchHHHHHHHHHHHHHHHHHH-hcc
Q 010212 466 GVKKALLILGGANFLGMLFTF-LVP 489 (515)
Q Consensus 466 g~~~~~~~~~~~~~~~~~~~~-~~~ 489 (515)
+++..|++.+++.++..++.+ +++
T Consensus 182 ~~~~~fl~l~vl~~vv~ll~~~~vr 206 (591)
T PTZ00207 182 NTSAYFFFLMSFALVVGILAIVFMR 206 (591)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhee
Confidence 567777777777776666555 443
No 227
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.94 E-value=2.3e-09 Score=97.24 Aligned_cols=137 Identities=20% Similarity=0.153 Sum_probs=115.7
Q ss_pred HHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccc
Q 010212 346 QTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFV 425 (515)
Q Consensus 346 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (515)
......+..++..++.|.+.||+|+|..+++|++++..+.+++++.. .+...++.=...+.+..+......+
T Consensus 111 LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~--------sy~~l~vAR~LQgvgsA~~~tsgla 182 (464)
T KOG3764|consen 111 LFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGN--------SYPMLFVARSLQGVGSAFADTSGLA 182 (464)
T ss_pred HHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcc--------hhHHHHHHHHHhhhhHHHHHhhhHH
Confidence 56667778888999999999999999999999999999999988765 3444555555555555556667788
Q ss_pred cccccCchhh-hhhhhHHHHHHhhhhHHHHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHHhccc
Q 010212 426 VPAEIFPARL-RSTCHGISAASGKAGAIVGAFGFLYLADTSGVKKALLILGGANFLGMLFTFLVPE 490 (515)
Q Consensus 426 ~~~~~~p~~~-~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 490 (515)
++++.+|++. |++++|+.-.+..+|-.+||.+.|.++|..|++..|.++++++++-..+-+++-+
T Consensus 183 mlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~ 248 (464)
T KOG3764|consen 183 MLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIE 248 (464)
T ss_pred HHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeC
Confidence 9999999765 6999999999999999999999999999999999999999999998888775433
No 228
>PRK09669 putative symporter YagG; Provisional
Probab=98.93 E-value=7.8e-08 Score=94.83 Aligned_cols=120 Identities=18% Similarity=0.167 Sum_probs=93.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchh
Q 010212 69 VASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLS 148 (515)
Q Consensus 69 ~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~ 148 (515)
..+.+.....+...++.+++++++||+|+|+.+..+.++.++..+...+.+. ++.+.+++..++.|++.+...+..
T Consensus 265 ~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~g~~~~~~~~~~ 340 (444)
T PRK09669 265 LATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPP----SNVWLIFALNILFNFIQNLTTPLQ 340 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCc----chHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455666677888889999999999999999998888766654443333221 116777888899999999999999
Q ss_pred hHhhhhcccc-------ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 010212 149 ATIMSEYANK-------KTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKA 192 (515)
Q Consensus 149 ~~~i~e~~~~-------~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~ 192 (515)
.++++|..+. +..|...+.......+|..+|+.+++.+.+..+.
T Consensus 341 ~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 341 WSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999998862 2345677888889999999999999999887764
No 229
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.92 E-value=2.2e-08 Score=110.82 Aligned_cols=118 Identities=16% Similarity=0.094 Sum_probs=102.7
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhc--------------------CCCCc
Q 010212 64 TLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLS--------------------FGKEP 123 (515)
Q Consensus 64 ~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~--------------------~~~~~ 123 (515)
+.+..+.|++.+.+.++..+++++.|+++|+.++++.+..+.++.+++.+..++. .+
T Consensus 257 g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--- 333 (1140)
T PRK06814 257 GGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRH--- 333 (1140)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccc---
Confidence 8899999999999999999999999999999888877766666666655544442 33
Q ss_pred hhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 010212 124 KAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVS 187 (515)
Q Consensus 124 ~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~ 187 (515)
.+.+++..++.|++.+...+...+++.+.+|+++||+++|+.+....+|..+++++.+.+.
T Consensus 334 ---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~ 394 (1140)
T PRK06814 334 ---GWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQ 394 (1140)
T ss_pred ---cHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHH
Confidence 5778888999999999999999999999999999999999999999999999999988885
No 230
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.90 E-value=8.2e-08 Score=89.90 Aligned_cols=161 Identities=25% Similarity=0.382 Sum_probs=127.1
Q ss_pred HHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCch--hHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHH
Q 010212 33 FTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPD--NVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVI 110 (515)
Q Consensus 33 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~--~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i 110 (515)
+....+........+.+..++ +.+. ...++..+.+.++..++.++.|.++||+|||+.+..+.....+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~ 81 (338)
T COG0477 12 LLLGLDLGLLSPALPLLLSTL----------SLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLL 81 (338)
T ss_pred HHHHHhcchHHHHHHHHHHHc----------CCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHH
Confidence 333366666677777777777 5554 5789999999999999999999999999999888888876666
Q ss_pred HHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhcccc-ccchhHHHHHHH-HHHHHHHHHHHHHHHHHH
Q 010212 111 CSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANK-KTRGAFIAAVFA-MQGFGILSGGMVAIIVSA 188 (515)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~-~~r~~~~~~~~~-~~~~G~~~g~~l~~~l~~ 188 (515)
+.++.++..+ ...+.+++.|+++|++.+...+...+++.|+.|+ ++|+...+.... ...+|..+++.+++.+..
T Consensus 82 ~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (338)
T COG0477 82 GTLLLALAPN----VGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLG 157 (338)
T ss_pred HHHHHHhCcc----chHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666666665 1178999999999999999999999999999998 678999998888 588899999988877754
Q ss_pred hhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHH
Q 010212 189 AFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALL 228 (515)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~ 228 (515)
. ...+||..|.+.......
T Consensus 158 ~---------------------~~~~~~~~~~~~~~~~~~ 176 (338)
T COG0477 158 A---------------------LLWGWRAAFLLAALLGLL 176 (338)
T ss_pred H---------------------HhcchHHHHHHHHHHHHH
Confidence 3 124599966665555433
No 231
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.88 E-value=7e-07 Score=83.64 Aligned_cols=137 Identities=11% Similarity=-0.000 Sum_probs=97.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhh
Q 010212 70 ASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSA 149 (515)
Q Consensus 70 ~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~ 149 (515)
.+.+.-+-.+...+..+.+.++.+|+..+.=+.....++.++.++.+++++ .+.=+++-.+.+++.|.......
T Consensus 61 t~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~------v~~~l~Gv~las~ssg~GE~tfL 134 (402)
T PF02487_consen 61 TGAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPS------VWVRLLGVVLASLSSGLGEVTFL 134 (402)
T ss_pred chHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccc------hhHHHHHHHHHhhhhhhhHHHHH
Confidence 455666666777788888889999987655566667788889999999988 78888999999999998888888
Q ss_pred HhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHH
Q 010212 150 TIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLT 229 (515)
Q Consensus 150 ~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~ 229 (515)
.+.. .+++ ...+-+..+.+.+.++|+..-..+.. .+ ..-|..+++...+.++.
T Consensus 135 ~lt~-~y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~-~g---------------------~s~~~tll~~~~lp~~~ 187 (402)
T PF02487_consen 135 SLTH-FYGK----SSLSAWSSGTGGAGLVGALYYLGLTT-LG---------------------LSPRTTLLIMLVLPAIF 187 (402)
T ss_pred HHHH-hcCc----cccccccCCcChhhHHHHHHHHHHHH-hC---------------------cCHHHHHHHHHHHHHHH
Confidence 7754 5553 35677777788888888877766654 22 23577777765555444
Q ss_pred HHH-HHhcCCc
Q 010212 230 YYW-RMKMPET 239 (515)
Q Consensus 230 ~~~-~~~~~e~ 239 (515)
.+. ++.+|.+
T Consensus 188 ~~~~f~~L~~~ 198 (402)
T PF02487_consen 188 LLSYFFLLPSP 198 (402)
T ss_pred HHHHHHhhccc
Confidence 443 3445543
No 232
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.86 E-value=2.9e-08 Score=96.33 Aligned_cols=137 Identities=14% Similarity=0.077 Sum_probs=114.1
Q ss_pred HHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccc
Q 010212 346 QTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFV 425 (515)
Q Consensus 346 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (515)
.......+.+++.+.++++.||+|-|+++..+.++.+++.++..+.... ....+++.=++.++......|....
T Consensus 78 i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~------~~~~~~~~R~lqGl~~g~~~pa~~~ 151 (466)
T KOG2532|consen 78 IFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASI------GFYLLLVLRFLQGLGQGVLFPAIGS 151 (466)
T ss_pred HHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHh------cchhhHHHHHHhHHHHhHHHhhhhc
Confidence 5556667888899999999999999999999999999998888876621 1223444445555555556788888
Q ss_pred cccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhc-cCchHHHHHHHHHHHHHHHHHHhc
Q 010212 426 VPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADT-SGVKKALLILGGANFLGMLFTFLV 488 (515)
Q Consensus 426 ~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~ 488 (515)
+..+-.|+++|++..++.....++|.+++-.+.|.+.+. .||+..|++.+++.++..++++++
T Consensus 152 i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~ 215 (466)
T KOG2532|consen 152 ILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLF 215 (466)
T ss_pred eeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998 999999999999998888877733
No 233
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.86 E-value=7.5e-05 Score=72.48 Aligned_cols=123 Identities=7% Similarity=-0.030 Sum_probs=89.0
Q ss_pred chhHHHHHHHHHHHHHHHH-HHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhc----CCCCch-------------h--
Q 010212 66 PDNVASAVNGVALCGTLAG-QLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLS----FGKEPK-------------A-- 125 (515)
Q Consensus 66 s~~~~g~~~s~~~l~~~i~-~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~----~~~~~~-------------~-- 125 (515)
+.+.+.++-+...+..++. .++.+++++|++|++++-.....+....+++++. .+.-++ +
T Consensus 41 gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~ 120 (472)
T TIGR00769 41 GAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFM 120 (472)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhH
Confidence 3467888888887877766 9999999999999999887777776666666554 111000 0
Q ss_pred ------HHHHHHHHHHHhhhccccccc-hhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010212 126 ------VMITLCFFRFWLGFGIGGDYP-LSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSA 188 (515)
Q Consensus 126 ------~~~~l~~~r~l~G~~~g~~~~-~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~ 188 (515)
..|...+..+...+-...... .-..+++|.++.+|-.|..+++..+.++|.++++.+...+.+
T Consensus 121 ~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 121 GFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 012333333444444444444 677899999999999999999999999999999988888764
No 234
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.85 E-value=7.1e-08 Score=95.22 Aligned_cols=132 Identities=14% Similarity=0.091 Sum_probs=93.1
Q ss_pred HHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccc
Q 010212 346 QTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFV 425 (515)
Q Consensus 346 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (515)
......++..+..++.|+++|.+|||+.++.+.++..++.++.+... +....+....+.+.. .+.......
T Consensus 83 ~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~--------~~~~~iag~~l~Gvg-aG~~~~~~~ 153 (599)
T PF06609_consen 83 FSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQ--------NMNTFIAGMVLYGVG-AGVQELAAL 153 (599)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCC--------cHHHHHHHHHHHHHh-hHHHHHHHH
Confidence 44445566777778999999999999999999999999998876544 122222222222222 233334455
Q ss_pred cccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHH
Q 010212 426 VPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSGVKKALLILGGANFLGMLFTF 486 (515)
Q Consensus 426 ~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 486 (515)
.++|..|.+.|..+.++.....-.....++.+...+....+|++.|++..+...++.+..+
T Consensus 154 ~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~ 214 (599)
T PF06609_consen 154 AISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIF 214 (599)
T ss_pred HHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHH
Confidence 6799999999988887776655555556777777776677899999988887777766555
No 235
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.84 E-value=2.9e-08 Score=97.93 Aligned_cols=159 Identities=9% Similarity=0.069 Sum_probs=124.2
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhcCCCCc----hhHHHHHHHHHHHhhh
Q 010212 64 TLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLSFGKEP----KAVMITLCFFRFWLGF 139 (515)
Q Consensus 64 ~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~----~~~~~~l~~~r~l~G~ 139 (515)
|.++.+.|.+.....++..++....+++.+|++.|+++.++.++.+++.+......+... ....+.++..-++.++
T Consensus 284 G~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~ 363 (468)
T TIGR00788 284 PGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEV 363 (468)
T ss_pred CCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHH
Confidence 899999999999999999999999999999999999999999999988866542211000 0002455666788888
Q ss_pred ccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHH
Q 010212 140 GIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIIL 219 (515)
Q Consensus 140 ~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f 219 (515)
+.+........++.+.+|+++++...++.....++|..+++.+++.+.+..+.. .++++.++..
T Consensus 364 ~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~----------------~~~~~~~~~~ 427 (468)
T TIGR00788 364 LAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGIT----------------CDNSNNLWLL 427 (468)
T ss_pred HHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC----------------cccccchHHH
Confidence 888889999999999999999999999999999999999999999999887731 2333344444
Q ss_pred HH-hHHHHHHHHHHHHhcCC
Q 010212 220 MF-GAIPALLTYYWRMKMPE 238 (515)
Q Consensus 220 ~~-~~~~~~~~~~~~~~~~e 238 (515)
++ +.+..++.+...+++|+
T Consensus 428 i~i~~~~~l~~l~~~~llP~ 447 (468)
T TIGR00788 428 ILGHSLAPLLPLPLLHLLPR 447 (468)
T ss_pred HHHHHHHHHHHHHHHHhCCC
Confidence 33 45555555555568886
No 236
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.82 E-value=5.3e-08 Score=84.20 Aligned_cols=145 Identities=12% Similarity=0.048 Sum_probs=110.0
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHH-HHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccc
Q 010212 64 TLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTL-MMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIG 142 (515)
Q Consensus 64 ~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~-~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g 142 (515)
|+|+...+.+.+....-.++.+++.|.++||+|++-..+.+. +...++-....++. +.=+++..+.|+...
T Consensus 296 GlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft~--------lsPy~~m~~lGLsys 367 (459)
T KOG4686|consen 296 GLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFTF--------LSPYTSMTFLGLSYS 367 (459)
T ss_pred CCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhhh--------ccHHHHHHHHhhhHH
Confidence 999999999999999999999999999999999997765544 44445555544442 333567778888877
Q ss_pred cccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHH-
Q 010212 143 GDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMF- 221 (515)
Q Consensus 143 ~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~- 221 (515)
.........++...|+++.|++.+..+...++|.++.|++++.+.+..+ .+.|--.|.+
T Consensus 368 llAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g--------------------~y~~le~ffl~ 427 (459)
T KOG4686|consen 368 LLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDG--------------------SYDNLEAFFLI 427 (459)
T ss_pred HHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCC--------------------chhhHHHHHHH
Confidence 7666677788889999999999999999999999999999999864322 2456666655
Q ss_pred hHHHHHHHHHHHHhc
Q 010212 222 GAIPALLTYYWRMKM 236 (515)
Q Consensus 222 ~~~~~~~~~~~~~~~ 236 (515)
.+..++....+.+.+
T Consensus 428 ~~~~aL~svgil~~~ 442 (459)
T KOG4686|consen 428 IGLMALTSVGILFYL 442 (459)
T ss_pred HHHHHHHHHHHHhhe
Confidence 444555555444444
No 237
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.82 E-value=2.9e-07 Score=87.66 Aligned_cols=162 Identities=16% Similarity=0.230 Sum_probs=121.3
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhcccc
Q 010212 64 TLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGG 143 (515)
Q Consensus 64 ~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 143 (515)
+.++.+..+.......+..++.+++.++++|+|+|+++..+.++..++.++..+.+. ++.+.+++..++.+++.+.
T Consensus 268 g~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~----~~~~l~~~~~~i~~~g~~~ 343 (467)
T COG2211 268 GDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPA----GSVVLIVVALIIAGVGTGI 343 (467)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcC----cchHHHHHHHHHHHHHhhc
Confidence 566667778888888888888999999999999999999999999999999998873 1278889999999999999
Q ss_pred ccchhhHhhhhcccc-------ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccCCCCCC-ccccCCCchH
Q 010212 144 DYPLSATIMSEYANK-------KTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFPAPIYSANPAA-STVPEADYIW 215 (515)
Q Consensus 144 ~~~~~~~~i~e~~~~-------~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~w 215 (515)
..+...++++|..+- +.-|...+......=+|.+++..+.+++....+.. |.. .+.+....|-
T Consensus 344 ~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~Gyv---------~~~~~Q~~~al~gI 414 (467)
T COG2211 344 ANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIGYV---------PNVSAQSASALFGI 414 (467)
T ss_pred cccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC---------CCcccCCHHHHHHH
Confidence 999999999887643 23367777888888899999998888888776642 111 1112233455
Q ss_pred HHHHHH-hHHHHHHHHHHHHhcCC
Q 010212 216 RIILMF-GAIPALLTYYWRMKMPE 238 (515)
Q Consensus 216 r~~f~~-~~~~~~~~~~~~~~~~e 238 (515)
+..+.+ .++..++.++...+.|-
T Consensus 415 ~~~~~~~Pa~l~l~~~i~~~~y~L 438 (467)
T COG2211 415 RFLFIILPALLLLLAAIIIFFYKL 438 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccC
Confidence 666555 45555555554445443
No 238
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=98.82 E-value=1.3e-08 Score=94.29 Aligned_cols=133 Identities=11% Similarity=0.079 Sum_probs=99.8
Q ss_pred HHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhh----hhhhhHHH-HHHHHHHHHHHHhhhc
Q 010212 44 LVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDK----MGRKRVYG-MTLMMMVICSLASGLS 118 (515)
Q Consensus 44 ~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr----~Grr~~l~-~~~~~~~i~~~~~~~~ 118 (515)
..++++.++. +++....+.+--...+...+.+++.|..+|| +||||.++ .+.....++.++..++
T Consensus 53 sy~tPyl~~l----------Gvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~a 122 (498)
T KOG0637|consen 53 SYLTPYLQSL----------GVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYA 122 (498)
T ss_pred ccccHHHHHc----------CCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhH
Confidence 4455666677 8888888888888888889999999999995 89988755 4555566677777766
Q ss_pred CCCC--------c---hhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchh-HHHHHHHHHHHHHHHHHHHHHHH
Q 010212 119 FGKE--------P---KAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGA-FIAAVFAMQGFGILSGGMVAIIV 186 (515)
Q Consensus 119 ~~~~--------~---~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~-~~~~~~~~~~~G~~~g~~l~~~l 186 (515)
.+.. . ......++++--+.=++.......+-+++.|.+.++++.+ +.+.+....++|..+|..++++.
T Consensus 123 aDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 123 ADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSYL 202 (498)
T ss_pred hhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccccc
Confidence 5421 0 0112345555666667777788999999999998777766 99999999999999999888744
No 239
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.81 E-value=5.6e-07 Score=81.32 Aligned_cols=151 Identities=12% Similarity=0.070 Sum_probs=98.0
Q ss_pred hhHHHHHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhh-----
Q 010212 19 WYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGD----- 93 (515)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~d----- 93 (515)
+.....+..+.+.+..++.-.+..+ .+|.+.+.- +.|.++.+...-++. . ..--++|.++.|
T Consensus 27 ~~d~~~illLl~LYllQGiP~GL~~-~iP~lL~ak----------~vSyt~~a~fS~ay~-P-~sLKllWaPiVDs~y~k 93 (510)
T KOG3574|consen 27 KGDRSSILLLLFLYLLQGIPLGLIG-AIPLLLQAK----------GVSYTSQAIFSFAYW-P-FSLKLLWAPIVDSVYSK 93 (510)
T ss_pred hhhhhhHHHHHHHHHHcCCchhHhh-hhHHHhcCC----------Ccchhhhhhhhhhhh-H-HHHHHHHHhhhHHHHHH
Confidence 3445566777778888898888888 889888766 888887765543321 1 334678999999
Q ss_pred hhhhhhHH-HHHHHHHHHHHHHhhhcCCCC-----chhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHH
Q 010212 94 KMGRKRVY-GMTLMMMVICSLASGLSFGKE-----PKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAA 167 (515)
Q Consensus 94 r~Grr~~l-~~~~~~~~i~~~~~~~~~~~~-----~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~ 167 (515)
|+||||.. +-+..+.+..+.+.+.-.+.. ...+...+...-++.-+..+.-..+...+.-.+..+++-|-+...
T Consensus 94 ~~GrrksWvvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~ 173 (510)
T KOG3574|consen 94 RFGRRKSWVVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTC 173 (510)
T ss_pred hhccccceeeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHH
Confidence 99999863 334444444444444332211 011122333445666677777778888888888888888888776
Q ss_pred HHHHHHHHHHHHHHH
Q 010212 168 VFAMQGFGILSGGMV 182 (515)
Q Consensus 168 ~~~~~~~G~~~g~~l 182 (515)
...+.+.|..++..+
T Consensus 174 q~Vg~~~GyfL~~~i 188 (510)
T KOG3574|consen 174 QSVGQTAGYFLGNVV 188 (510)
T ss_pred HHHHHhhhHHhhcce
Confidence 666666666655544
No 240
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.79 E-value=6.7e-08 Score=97.44 Aligned_cols=136 Identities=21% Similarity=0.250 Sum_probs=111.5
Q ss_pred HHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccc
Q 010212 346 QTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFV 425 (515)
Q Consensus 346 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (515)
...+..++..+|.++.|.++||+|||++++.+.++..++.+..++.. ++....+.=++.+++..+...+.+.
T Consensus 123 ~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~--------~~~~~~~~Rfl~G~~~~~~~~~~~~ 194 (521)
T KOG0255|consen 123 GQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAP--------NYWMFLIFRFLSGFFGSGPLTVGFG 194 (521)
T ss_pred HHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhC--------cHHHHHHHHHHHHhhccchhHHhHh
Confidence 56677788899999999999999999999999999999887776654 4455555556666666667778889
Q ss_pred cccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHHhccccC
Q 010212 426 VPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSGVKKALLILGGANFLGMLFTFLVPESK 492 (515)
Q Consensus 426 ~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (515)
+..|.++++.|+.+..+ ....+.++.+++...+++.. +|+..+++..+..++..+..++.+|.+
T Consensus 195 ~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~~~l~~Es~ 258 (521)
T KOG0255|consen 195 LVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLLWFLPPESP 258 (521)
T ss_pred hheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHccCcCh
Confidence 99999999999999999 88888999999999999976 899998888887777766654554543
No 241
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.77 E-value=1.2e-07 Score=83.46 Aligned_cols=171 Identities=17% Similarity=0.119 Sum_probs=110.0
Q ss_pred HHHHHHHHHhhhhhHHHhHhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHH
Q 010212 305 LLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVF 384 (515)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~ 384 (515)
......|....|.|.+-+..++++++.+. ......++.-+| +..|.+.|++|.+.++.++.....++
T Consensus 13 ~~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~------------l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~G 79 (250)
T PF06813_consen 13 LCSGTTYTFSAYSPQLKSRLGYSQSQLNT------------LSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVG 79 (250)
T ss_pred HhcCcccchhhhhHHHHHHhCCCHHHHHH------------HHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 33456677888899998888888776443 445555555554 68899999999999999999999999
Q ss_pred HHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhc
Q 010212 385 MFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADT 464 (515)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~ 464 (515)
...+.......... .+.+.+.++....+......+........+.+| ++||++.|+.-....+++.+-..+...+.+.
T Consensus 80 Y~~~~l~~~~~i~~-~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~ 157 (250)
T PF06813_consen 80 YGLLWLAVSGRIPS-LPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGD 157 (250)
T ss_pred HHHHHHHHhCccCc-cchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCC
Confidence 98887765322211 223333333333322222223333344567888 6899999999999999999888888877654
Q ss_pred cCchHHHHHHHHH-HHHHHHHHHhcccc
Q 010212 465 SGVKKALLILGGA-NFLGMLFTFLVPES 491 (515)
Q Consensus 465 ~g~~~~~~~~~~~-~~~~~~~~~~~~~~ 491 (515)
+....+.+.+.. .+++.+..++++..
T Consensus 158 -~~~~fll~la~~~~~v~l~~~~~vr~~ 184 (250)
T PF06813_consen 158 -DPSSFLLFLAVLPAVVCLVAMFFVRPV 184 (250)
T ss_pred -ChHHHHHHHHHHHHHHHHHHhhheecc
Confidence 333333333333 33333344455443
No 242
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.75 E-value=9.2e-08 Score=86.02 Aligned_cols=101 Identities=16% Similarity=0.259 Sum_probs=82.8
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhcc
Q 010212 77 ALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYA 156 (515)
Q Consensus 77 ~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~ 156 (515)
..+.-.-|.++.+.+.||+|||+.+..+.+++++..++.....+.+.. -..++.+|++. .+.+.+.+.|..|.+
T Consensus 390 tslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~--tvllf~arafi----sg~fqvaYvYtPEVy 463 (528)
T KOG0253|consen 390 TSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAY--TVLLFTARAFI----SGAFQVAYVYTPEVY 463 (528)
T ss_pred HHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchh--HHHHHHHHHHH----hchheEEEEecCccc
Confidence 345567789999999999999999999999999999888776653110 23455666554 344678889999999
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHHH
Q 010212 157 NKKTRGAFIAAVFAMQGFGILSGGMVA 183 (515)
Q Consensus 157 ~~~~r~~~~~~~~~~~~~G~~~g~~l~ 183 (515)
|.+-|+...|.-....-+|.++.|+++
T Consensus 464 PTavRatgvGtcSsmaRIggI~~p~iA 490 (528)
T KOG0253|consen 464 PTAVRATGVGTCSSMARIGGIFSPVIA 490 (528)
T ss_pred chhhhhcchhhhhhHHhhhhhhhhHHH
Confidence 999999999999999999999999998
No 243
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.73 E-value=4.6e-07 Score=73.38 Aligned_cols=110 Identities=16% Similarity=0.136 Sum_probs=94.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhH
Q 010212 71 SAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSAT 150 (515)
Q Consensus 71 g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~ 150 (515)
-.-.++.+....+++++.+.+.+++|.|+.+++|.+...+-.+.. +-++ .+.++.+-.+.|++.+..+.....
T Consensus 40 ~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~------~~~l~~~s~l~G~~~a~lW~aqg~ 112 (156)
T PF05978_consen 40 YYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPN------SYTLYPASALLGFGAALLWTAQGT 112 (156)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-Hhhh------HHHHHHHHHHHhhhhHHhhHhhhH
Confidence 344556666778888889999999999999999999988655544 4445 689999999999999999999999
Q ss_pred hhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 010212 151 IMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVS 187 (515)
Q Consensus 151 ~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~ 187 (515)
++.+..++++|++..+++......+.++|.++...+.
T Consensus 113 ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 113 YLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred HHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999988887763
No 244
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.72 E-value=9.4e-08 Score=90.21 Aligned_cols=183 Identities=11% Similarity=-0.023 Sum_probs=123.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHh-hchhhH
Q 010212 295 HLIGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDK-IGRFAI 373 (515)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~ 373 (515)
.++.+...-+.--+.+|++...+..|+... ..+. .+.+...... ....+....-+..+++||++|| +|+|+.
T Consensus 22 ~l~~if~vE~WERFsyYGmraiL~~Yl~~~-~~~g-Lg~~~~~A~~-----l~~~y~slVY~t~i~GG~laDr~LG~~~t 94 (498)
T COG3104 22 GLYLIFFVELWERFSYYGMRAILILYLYYQ-LGDG-LGFDETHATG-----LFSAYGSLVYLTPIIGGWLADRVLGTRRT 94 (498)
T ss_pred hHHHHHHHHHHHHHhhhhhHHHHHHHHHHh-cccc-CCcChHhhHH-----HHHHHHHHHHHHHHHHHHHHHHhcchhHH
Confidence 344455555555577888776666665541 1111 3333332222 2222222223355688999999 599999
Q ss_pred HHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchh--hhhhhhHHHHHHhhhhH
Q 010212 374 QLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPAR--LRSTCHGISAASGKAGA 451 (515)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~g~~~~~~~~g~ 451 (515)
+..+.+++.++.+++.... ..... .+.+.......+....-+....++.|.+|++ +|-.+.++..+..++|+
T Consensus 95 I~lGail~~iGh~~L~~~~-----~~~~~-gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGs 168 (498)
T COG3104 95 IVLGAILMAIGHLVLAISS-----VSGPG-GLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGS 168 (498)
T ss_pred HHHHHHHHHHHHHHHhccc-----ccccc-HHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHH
Confidence 9999999999999987653 01112 2222233333444455667778889998753 36778888899999999
Q ss_pred HHHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHHhccc
Q 010212 452 IVGAFGFLYLADTSGVKKALLILGGANFLGMLFTFLVPE 490 (515)
Q Consensus 452 ~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 490 (515)
.++|.+.+++.+..||...|...++-..++.+.+++.++
T Consensus 169 l~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r 207 (498)
T COG3104 169 LIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRR 207 (498)
T ss_pred HHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccc
Confidence 999999999999999999999999888888887776554
No 245
>PRK11462 putative transporter; Provisional
Probab=98.72 E-value=1.7e-06 Score=85.45 Aligned_cols=120 Identities=22% Similarity=0.167 Sum_probs=84.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccch
Q 010212 68 NVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPL 147 (515)
Q Consensus 68 ~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~ 147 (515)
...+.+.+.+.++..++.+++++++||+|+|+++..+..+.++..++..+.++.+ ...+++.-++.|++.+...+.
T Consensus 263 ~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~g~~~~~~~~l 338 (460)
T PRK11462 263 EVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQA----SITMFVFIFVIGVLHQLVTPI 338 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhH----HHHHHHHHHHHHHHHHHHHHH
Confidence 3456677788889999999999999999999987766555544444443333310 223444556678877776676
Q ss_pred hhHhhhhccc-------cccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 010212 148 SATIMSEYAN-------KKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFK 191 (515)
Q Consensus 148 ~~~~i~e~~~-------~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~ 191 (515)
..+++.|..+ +++.|...+......-+|..+|+.+++.+....+
T Consensus 339 ~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~G 389 (460)
T PRK11462 339 QWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGG 389 (460)
T ss_pred HHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 6778887766 2333555677778889999999999998887655
No 246
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.71 E-value=1.1e-07 Score=67.05 Aligned_cols=76 Identities=18% Similarity=0.188 Sum_probs=72.6
Q ss_pred HHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHH
Q 010212 35 DAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLA 114 (515)
Q Consensus 35 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~ 114 (515)
.+..+..+++++|.+.+|. ++|.++.|++.+..++||.+|++...++.++..+++.+..+++...+..+.
T Consensus 4 mGigRFayTplLP~M~~~~----------~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 73 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQADG----------GLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAA 73 (85)
T ss_pred hhhHHHHHHhHhHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 4678899999999999999 999999999999999999999999999999988899999999999999999
Q ss_pred hhhcCC
Q 010212 115 SGLSFG 120 (515)
Q Consensus 115 ~~~~~~ 120 (515)
+++.++
T Consensus 74 ma~~~~ 79 (85)
T PF06779_consen 74 MALTHS 79 (85)
T ss_pred HHHHhc
Confidence 999988
No 247
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.67 E-value=1.1e-06 Score=79.51 Aligned_cols=154 Identities=16% Similarity=0.206 Sum_probs=121.0
Q ss_pred hhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhhHHHHHHHHHHHHHHHhhh
Q 010212 39 LFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDK-MGRKRVYGMTLMMMVICSLASGL 117 (515)
Q Consensus 39 ~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr-~Grr~~l~~~~~~~~i~~~~~~~ 117 (515)
.++.-.-+|.+..|- |+|..+.|++.+...+.....++....+++| -++|+..+....++.++.+.+.+
T Consensus 224 ~Y~~~~WLP~ili~~----------G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~ 293 (395)
T COG2807 224 YYIVIGWLPAILIDR----------GLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLL 293 (395)
T ss_pred HHHHHHHHHHHHHHc----------CCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHH
Confidence 344456678888888 9999999999999999999999999999996 45778888888888888888888
Q ss_pred cCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhcccc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCC
Q 010212 118 SFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANK-KTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFPA 196 (515)
Q Consensus 118 ~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~-~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~~ 196 (515)
.+.. ..+..-++.|+|.|..++.+...+.+..+. ++-++..++.+....+=...||.+.|++-+.+++
T Consensus 294 ~P~~-------~~~lw~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gs---- 362 (395)
T COG2807 294 APGQ-------LPILWALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGS---- 362 (395)
T ss_pred hhhh-------HHHHHHHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCC----
Confidence 8772 222225899999999999999999988864 4455666666666666677789999998765554
Q ss_pred CccCCCCCCccccCCCchHHHHHHHhHHHHHHHHH
Q 010212 197 PIYSANPAASTVPEADYIWRIILMFGAIPALLTYY 231 (515)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~ 231 (515)
|+...+..+...++..+
T Consensus 363 ------------------w~~~~~~l~~~~i~m~i 379 (395)
T COG2807 363 ------------------WSAPLVLLALATLLMLI 379 (395)
T ss_pred ------------------hHHHHHHHHHHHHHHHH
Confidence 99988876655554433
No 248
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.66 E-value=1.9e-06 Score=74.14 Aligned_cols=86 Identities=15% Similarity=0.088 Sum_probs=64.6
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhcccc
Q 010212 64 TLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGG 143 (515)
Q Consensus 64 ~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 143 (515)
+....++|.+.-..+-...+...+.|-++|+-|||+.-+.-++...++++ .-.+++ +-.++++|.+-|++.+.
T Consensus 68 gFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCi-TKhSpq------YkVLmVGR~LGGiaTsL 140 (454)
T KOG4332|consen 68 GFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCI-TKHSPQ------YKVLMVGRVLGGIATSL 140 (454)
T ss_pred CccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHH-hhcCCc------eEEEeehhhhhhHHHHH
Confidence 77778888888777777888889999999999999975554444444332 233455 67899999999999888
Q ss_pred ccchhhHh-hhhcc
Q 010212 144 DYPLSATI-MSEYA 156 (515)
Q Consensus 144 ~~~~~~~~-i~e~~ 156 (515)
.+...-++ +.|.-
T Consensus 141 LFSaFEsWliaEHn 154 (454)
T KOG4332|consen 141 LFSAFESWLIAEHN 154 (454)
T ss_pred HHHHHHHHHHHHhh
Confidence 88777665 45544
No 249
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=98.66 E-value=5.1e-07 Score=80.54 Aligned_cols=369 Identities=13% Similarity=0.099 Sum_probs=197.8
Q ss_pred CCchhHHH-HHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccc
Q 010212 64 TLPDNVAS-AVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIG 142 (515)
Q Consensus 64 ~~s~~~~g-~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g 142 (515)
++++.++. -+.=...-.+.+.-++.=.+.|..-.|++++.-.+.......+..+.++ .+.+=+.-++-|...+
T Consensus 37 NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~s------V~~mQvlE~FyG~~tA 110 (433)
T KOG3810|consen 37 NLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPS------VKAMQVLEFFYGPATA 110 (433)
T ss_pred CccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCC------chheeeehhhcChHHH
Confidence 55554443 3333444556677777778999998999998888888888888888888 7888888889998766
Q ss_pred cccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHh
Q 010212 143 GDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFG 222 (515)
Q Consensus 143 ~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~ 222 (515)
. ..+-++++-+..+++++.++.+.--+..-.|-..|..++..+... +..++...-.+.
T Consensus 111 a-EIAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~---------------------~~~sy~~LN~IS 168 (433)
T KOG3810|consen 111 A-EIAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSL---------------------ETLSYTTLNYIS 168 (433)
T ss_pred H-HHhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhh---------------------cccchhhhchhh
Confidence 5 678889999999999999999998888888888888888777532 334466666665
Q ss_pred HHHHHHHHHHHHhcCCchhhHHHHhccHHHHHHHHHHHHHhhhhHhhhhHHHhhcCCcchhhhhhhhhhhhHHHHHHHHH
Q 010212 223 AIPALLTYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVELEAEQEKVEQEKGKNDFGLFSAKFVRRHGLHLIGTTVT 302 (515)
Q Consensus 223 ~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (515)
.....+...+..++|..++....++++++....++++. +.+.+..+..+......++.++.-..++ .++.-.+-
T Consensus 169 L~~~~ia~~~A~fLP~v~rSl~f~~~~~~~~v~~~e~~---~~~~~~~~~l~~~~~~l~~~l~~~y~np---~ll~WSlW 242 (433)
T KOG3810|consen 169 LAEVTIAVLLALFLPRVKRSLYFHRLEDKISVGDLEEM---NPQASYMSYLRGAFVLLWRDLQECYSNP---RLLKWSLW 242 (433)
T ss_pred HHHHHHHHHHHhhCCCCchhhhhhcccccceeccchhc---CccchhhHHHHHHHHHHHHHHHHHhcCc---hhhhhHHH
Confidence 55556666777788887755322222211110000000 0000000000000001111111111111 22223333
Q ss_pred HHHHHHHHHHHhhhhhHHHhHhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHH--HHHHH
Q 010212 303 WFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQL--MGFFF 380 (515)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~--~~~~~ 380 (515)
|.....+++....+...+.++.. +..... ..|. .=.+....+.++.+..|++.-++.|..-+. ++...
T Consensus 243 wAl~scg~~QV~nY~Q~LW~~~~--~~~~~v-------yNG~-veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~ 312 (433)
T KOG3810|consen 243 WALASCGYYQVTNYTQILWKEVA--PNPANV-------YNGA-VEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAV 312 (433)
T ss_pred HHHhhchhHHHHHHHHHHHHhhC--CCchhh-------hcCH-HHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHH
Confidence 44444566666666666666543 222111 0111 222233344556667777766665543333 33333
Q ss_pred HHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHH
Q 010212 381 MTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLY 460 (515)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~ 460 (515)
.+.+.+.+.... ..|..-....++-...... .++....+++....+.-|...|+..++.-+-..+- .-.
T Consensus 313 ~agllf~m~~t~-------~Iw~~Ya~yvlfr~~y~l~-itiA~~~iA~nL~~e~~gLvFGiNTFvAl~lQsil---T~i 381 (433)
T KOG3810|consen 313 QAGLLFIMAQTQ-------HIWVCYAGYVLFRVIYQLT-ITIATFQIARNLSSELFGLVFGINTFVALILQSIL---TLI 381 (433)
T ss_pred hhhhhhhhhccc-------ceehhhhhHHHHHhhHhhh-hhHHHHHHHHhhhhhhheeeeehHHHHHHHHHHhh---eEE
Confidence 333333322222 2222222233332333322 22332333444555777788888777655443333 323
Q ss_pred hhhccC-----------chHHHHHHHHHHHHHHHHHHh
Q 010212 461 LADTSG-----------VKKALLILGGANFLGMLFTFL 487 (515)
Q Consensus 461 l~~~~g-----------~~~~~~~~~~~~~~~~~~~~~ 487 (515)
+.|..| |..-|.+.+++.+++..+.+.
T Consensus 382 Vvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~~ 419 (433)
T KOG3810|consen 382 VVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIEYL 419 (433)
T ss_pred EEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHHHH
Confidence 334222 344577788888877666543
No 250
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.60 E-value=2.2e-06 Score=78.76 Aligned_cols=173 Identities=16% Similarity=0.041 Sum_probs=113.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHH
Q 010212 297 IGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLM 376 (515)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~ 376 (515)
......++..++.........|.+.+....+..+ +.........+..+..+..+++.+|+|+|+-++.
T Consensus 16 v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~------------a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~l 83 (422)
T COG0738 16 VLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFE------------ASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVL 83 (422)
T ss_pred HHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHH------------HHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHH
Confidence 4444455555556666666777776665554433 2225556666777778889999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHH
Q 010212 377 GFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAF 456 (515)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~ 456 (515)
++.++++++.++.-... ...+..........+.+.....+....++..+.|++..+.-+.+...++.+|++++|.
T Consensus 84 gL~l~avg~~lF~pAa~-----~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~ 158 (422)
T COG0738 84 GLLLYAVGAALFWPAAS-----SKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPL 158 (422)
T ss_pred HHHHHHHHHHHHhhhhh-----hhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHH
Confidence 99999999988754331 1122222222222222222234556677788888888888899999999999999999
Q ss_pred HHHHhhhc-------------------cCchHHHHHHHHHHHHHHHHHH
Q 010212 457 GFLYLADT-------------------SGVKKALLILGGANFLGMLFTF 486 (515)
Q Consensus 457 ~~~~l~~~-------------------~g~~~~~~~~~~~~~~~~~~~~ 486 (515)
+.+.+... ..++..+...+..+++..+...
T Consensus 159 ~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~ 207 (422)
T COG0738 159 LGSSLILSGVALTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLIL 207 (422)
T ss_pred HHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Confidence 99998872 1244556666655555554444
No 251
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.60 E-value=4.2e-07 Score=84.51 Aligned_cols=114 Identities=17% Similarity=0.076 Sum_probs=84.0
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccc
Q 010212 344 RAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTT 423 (515)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (515)
........++.+.|.++.|++.||+|||+++...++++.++.++.+.... -..+.....++.++=...+++..+-+|+.
T Consensus 87 ~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~-~~~~~~~m~~L~~~R~~LGiGIGGDYPlS 165 (538)
T KOG0252|consen 87 ALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVG-TTSPLGVMMTLCFFRFLLGIGIGGDYPLS 165 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCC-CCCCcchhhHHHHHHHHhhccccCCCcch
Confidence 33667778899999999999999999999999999999998886555442 11111333444444455556666678999
Q ss_pred cccccccCchhhhhhhhHHHHHHhhhhHHHHHHHH
Q 010212 424 FVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGF 458 (515)
Q Consensus 424 ~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~ 458 (515)
-++.+|....+.||+-.+.+.+.+..|...|..+.
T Consensus 166 AtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt 200 (538)
T KOG0252|consen 166 ATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVA 200 (538)
T ss_pred HHHhhhhhhhccccceeEEEEEecchhHhhccHHH
Confidence 99999999999999998888777766655444443
No 252
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.54 E-value=1.4e-06 Score=87.50 Aligned_cols=138 Identities=20% Similarity=0.158 Sum_probs=104.6
Q ss_pred HHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccc
Q 010212 346 QTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFV 425 (515)
Q Consensus 346 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (515)
......++..++.++.|+++|++|||+.+..+.+...++.++..... .+..+.+.=++.+++..+...+...
T Consensus 94 ~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~--------~~~~l~~GR~l~G~g~G~~~~~~pi 165 (513)
T KOG0254|consen 94 LTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAP--------SWYQLIVGRILTGLGVGGASVLAPV 165 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhh--------hHHHHHHHHHHhccchhhhhhcchh
Confidence 66667778889999999999999999999999999999998888765 2333333333343443444456678
Q ss_pred cccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhcc--CchHHHHHHHHHHHHHHHHHHhccccC
Q 010212 426 VPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTS--GVKKALLILGGANFLGMLFTFLVPESK 492 (515)
Q Consensus 426 ~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (515)
+.+|..|++.||...+.......+|..++ ++.+....+. +|+..+.+..+.+++..+..+++||+.
T Consensus 166 y~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp 233 (513)
T KOG0254|consen 166 YISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALGMLFLPESP 233 (513)
T ss_pred hHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHhCCCCh
Confidence 89999999999999999999888777777 6666665543 899888777777777777755777653
No 253
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.50 E-value=3.7e-06 Score=82.10 Aligned_cols=140 Identities=14% Similarity=0.095 Sum_probs=103.8
Q ss_pred HHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccc
Q 010212 346 QTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFV 425 (515)
Q Consensus 346 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (515)
......++.+++.+.++.+.||++-.+.+....++..+..++-.... +....++.-++.+.+..+..|....
T Consensus 86 ~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~--------s~~~~ialr~llGl~es~~wP~~~~ 157 (495)
T KOG2533|consen 86 LDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVH--------SFPGLIALRFLLGLFESGGWPGVVA 157 (495)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHh--------hhHHHHHHHHHHHHHhcccchHHHH
Confidence 45566677788888999999999955554444333333332222221 3444555556666777777888889
Q ss_pred cccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhh------hccCchHHHHHHHHHHHHHHHHHH-hccccCC
Q 010212 426 VPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLA------DTSGVKKALLILGGANFLGMLFTF-LVPESKG 493 (515)
Q Consensus 426 ~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~------~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 493 (515)
++...+.+++|+.-+|+.+....+|+++|+++...+. ...||++.|++-+++.++..++.+ ++|+...
T Consensus 158 ~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~ 232 (495)
T KOG2533|consen 158 ILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPS 232 (495)
T ss_pred HHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChh
Confidence 9999999999999999999999999999999988863 357899999999999888887777 6665443
No 254
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.50 E-value=2e-05 Score=73.24 Aligned_cols=154 Identities=18% Similarity=0.155 Sum_probs=125.0
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHhhhhh-hhhhhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccc
Q 010212 64 TLPDNVASAVNGVALCGTLAGQLFFGWLGD-KMGRKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIG 142 (515)
Q Consensus 64 ~~s~~~~g~~~s~~~l~~~i~~~~~G~l~d-r~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g 142 (515)
+.+..|...+++....|..++-...|++.. |.++|+.-.+++....++..+..++....+ .+.+...-++.|++.|
T Consensus 240 gmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~---~~~~~~~~~l~G~g~G 316 (403)
T PF03209_consen 240 GMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGS---PWLFRPGVFLLGLGNG 316 (403)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhccc---chHHHHHHHHHHHhhh
Confidence 999999999999999999999999999888 678888888888887777666544322111 5889999999999999
Q ss_pred cccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHh
Q 010212 143 GDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFG 222 (515)
Q Consensus 143 ~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~ 222 (515)
.......+.+.|..++++.|..+|.+...+.+...+|..+++.+.+.......+ ....+|-.+|.+.
T Consensus 317 ~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~-------------~~~~aY~~VF~lE 383 (403)
T PF03209_consen 317 LFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGN-------------SPALAYGVVFALE 383 (403)
T ss_pred HHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-------------CcchHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998765532110 1345688888887
Q ss_pred HHHHHHHHHHH
Q 010212 223 AIPALLTYYWR 233 (515)
Q Consensus 223 ~~~~~~~~~~~ 233 (515)
++..++.+.+.
T Consensus 384 a~ll~~a~~ll 394 (403)
T PF03209_consen 384 AVLLLAALVLL 394 (403)
T ss_pred HHHHHHHHHHH
Confidence 77666655443
No 255
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=98.47 E-value=8.3e-06 Score=77.14 Aligned_cols=148 Identities=12% Similarity=0.019 Sum_probs=84.0
Q ss_pred HHHHhHHHHHHhhhHHHHHHhhhhhh--hhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhh-----hhhhhh
Q 010212 27 IAGMGFFTDAYDLFCISLVTKLLGRI--YYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGD-----KMGRKR 99 (515)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~d-----r~Grr~ 99 (515)
++.+.+++++.-.+.....+|.+.++ - +.|.+|.+.+.-+ ...+. .-++|.++.| |+||||
T Consensus 4 lL~~LY~lQGiP~GL~~gsiPflL~~~~~----------~~sy~q~~~fSla-~~PfS-lKlLWaPiVDs~y~~~~GRRK 71 (544)
T PF13000_consen 4 LLVLLYFLQGIPLGLAFGSIPFLLQSMAK----------KVSYSQQAIFSLA-SYPFS-LKLLWAPIVDSVYSKRIGRRK 71 (544)
T ss_pred HHHHHHHHcCcccccccccchhhhccccC----------CCChhHheeeeee-echhH-HHHhhhhhhhhhcccccCCcc
Confidence 44556777777766655677888777 4 6788887754322 11111 3455666666 899998
Q ss_pred HHHH-HHHHHHHHHHHhhhcCC----------------CCchhH--HHHHHHHHHHhhhccccccchhhHhhhhcccccc
Q 010212 100 VYGM-TLMMMVICSLASGLSFG----------------KEPKAV--MITLCFFRFWLGFGIGGDYPLSATIMSEYANKKT 160 (515)
Q Consensus 100 ~l~~-~~~~~~i~~~~~~~~~~----------------~~~~~~--~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~ 160 (515)
..++ .-.+.++..+..+...+ ...... ...+...-++.=+-++.-..++..+.-.+..+++
T Consensus 72 SWiiP~Q~l~g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n 151 (544)
T PF13000_consen 72 SWIIPIQYLSGILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPEN 151 (544)
T ss_pred hhhhHHHHHHHHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhh
Confidence 7433 33444444443332220 000000 1123333334444455666777777777788888
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHH
Q 010212 161 RGAFIAAVFAMQGFGILSGGMVAIIV 186 (515)
Q Consensus 161 r~~~~~~~~~~~~~G~~~g~~l~~~l 186 (515)
++.+......+.++|..++..+--.+
T Consensus 152 ~~~ASTcqtvG~~~Gyfls~tvFlal 177 (544)
T PF13000_consen 152 VGYASTCQTVGQTAGYFLSFTVFLAL 177 (544)
T ss_pred cchHHHHHHhHhhhhHHHHHHHHHhh
Confidence 88888777777777766666554444
No 256
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=98.33 E-value=0.0007 Score=65.72 Aligned_cols=97 Identities=11% Similarity=-0.005 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccCCCCCC
Q 010212 126 VMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFPAPIYSANPAA 205 (515)
Q Consensus 126 ~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~ 205 (515)
.++..++.-++.|++.+.......++.+. +|++ .+..+..+.+++.+++.++--.......+. +
T Consensus 105 ~f~~~~~~v~~~g~~~~~~q~s~~gla~~-fp~~----~~~a~~~G~g~aGv~~s~~~ii~~a~~~~~-----~------ 168 (437)
T TIGR00939 105 FFVTTMASVVIINSGMALLQGSLFGLAGV-FPST----YSSAVMSGQGLAGVLTSLAMILVKASGNDS-----H------ 168 (437)
T ss_pred HHHHHHHHHHHHHhhhhhhcccchhhccc-CCHH----HHHHHHhcchhHHHHHHHHHHHHHHhcCCc-----c------
Confidence 36778888889999999988888888874 6654 344455566666666665543332211100 0
Q ss_pred ccccCCCchHHHHHHHhHHHHHHHHHHHHhcCCchhh
Q 010212 206 STVPEADYIWRIILMFGAIPALLTYYWRMKMPETARY 242 (515)
Q Consensus 206 ~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~ 242 (515)
....+=...|.++++..++.++....++..|..
T Consensus 169 ----~~~~~a~~YF~~a~~v~l~~i~~~~~l~k~~~~ 201 (437)
T TIGR00939 169 ----GLKKSALGYFGTPCVVQLICIVCYLLLPKLPFA 201 (437)
T ss_pred ----chhhhhhhHHHHHHHHHHHHHHHHHHHhcCHHH
Confidence 012223334444555555666666667766643
No 257
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.32 E-value=2.2e-06 Score=81.39 Aligned_cols=141 Identities=16% Similarity=0.040 Sum_probs=123.5
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhcccc
Q 010212 64 TLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGG 143 (515)
Q Consensus 64 ~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 143 (515)
+..+...|........|-.+.-++.+++.+|+|+-+++..++.+..+=.+..+...| .|..+..-+++|+..+.
T Consensus 402 ~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n------~W~vLPieilqgit~al 475 (618)
T KOG3762|consen 402 GGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQN------PWMVLPIEILQGITHAL 475 (618)
T ss_pred CCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcC------chheeeHHHHHHHHHHH
Confidence 566667787888888888999999999999999999999999999999999999999 89999999999999999
Q ss_pred ccchhhHhhhhccccccchhHHHHHH-HHHHHHHHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHh
Q 010212 144 DYPLSATIMSEYANKKTRGAFIAAVF-AMQGFGILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFG 222 (515)
Q Consensus 144 ~~~~~~~~i~e~~~~~~r~~~~~~~~-~~~~~G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~ 222 (515)
.+..+.+|++...||+.|..+.++.+ ...++|--+|.++|+.+. ...+=|..|.+.
T Consensus 476 iWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v-----------------------~~fg~~ttf~~~ 532 (618)
T KOG3762|consen 476 IWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVV-----------------------ERFGARTTFRIF 532 (618)
T ss_pred HHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhh-----------------------eeehhHHHHHHH
Confidence 99999999999999999999999876 455799999999999985 445578888887
Q ss_pred HHHHHHHHHHH
Q 010212 223 AIPALLTYYWR 233 (515)
Q Consensus 223 ~~~~~~~~~~~ 233 (515)
++.+++.++..
T Consensus 533 giAcl~~l~~~ 543 (618)
T KOG3762|consen 533 GIACLVTLALF 543 (618)
T ss_pred HHHHHHHHHHH
Confidence 77777655544
No 258
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.32 E-value=3.6e-06 Score=80.56 Aligned_cols=145 Identities=9% Similarity=-0.011 Sum_probs=95.7
Q ss_pred HHHHHHhhhhhHHHHHHHHHHhhch-hhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCcccccc
Q 010212 346 QTLIALCSTVPGYWFTVALIDKIGR-FAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTF 424 (515)
Q Consensus 346 ~~~~~~~~~~~~~~~~g~l~d~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (515)
......++..++.++.|+...|.++ |+.++.+.+++.++.++....... +++ ..++.+.+=+..+.+.+.....-
T Consensus 76 viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~---~~~-~~y~mL~~R~l~Gvg~~n~a~lR 151 (488)
T KOG2325|consen 76 VIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYV---PNG-VKYLMLVARILTGVGVGNFAVLR 151 (488)
T ss_pred HHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhc---ccc-hHHHHHHHHHHcCcCcccHHHHH
Confidence 4455778888899999999999885 777889999999998888443321 111 22233333222233333345566
Q ss_pred ccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhh-------------ccCchHHHHHHHHHHHHHHHHHH-hccc
Q 010212 425 VVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLAD-------------TSGVKKALLILGGANFLGMLFTF-LVPE 490 (515)
Q Consensus 425 ~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~-------------~~g~~~~~~~~~~~~~~~~~~~~-~~~~ 490 (515)
+|+++..-.++|.++++..+...-+|.++||.+...+.. ..-|..+-++.+++.++..++.+ +++|
T Consensus 152 ~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E 231 (488)
T KOG2325|consen 152 AYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKE 231 (488)
T ss_pred HHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheee
Confidence 788887767888888888888777888888777654432 01145666777778887777766 5666
Q ss_pred cCCC
Q 010212 491 SKGK 494 (515)
Q Consensus 491 ~~~~ 494 (515)
.++.
T Consensus 232 ~~~~ 235 (488)
T KOG2325|consen 232 VYRG 235 (488)
T ss_pred cccC
Confidence 5443
No 259
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.26 E-value=7.5e-06 Score=57.54 Aligned_cols=68 Identities=18% Similarity=0.259 Sum_probs=54.8
Q ss_pred hHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHH
Q 010212 31 GFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMM 108 (515)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~ 108 (515)
.+++.....+.+-|..|...++. |++..++|.+.++..+...++.+++|.++||+|+++.++....++
T Consensus 8 ~yf~~f~~~g~~~Pfl~~~~~~~----------Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 8 FYFFYFAALGCLYPFLPLYLKQL----------GLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHHhhhhHhhhhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 34445555555566666666777 999999999999999999999999999999999998877665543
No 260
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=98.24 E-value=0.00043 Score=64.66 Aligned_cols=175 Identities=11% Similarity=0.057 Sum_probs=86.3
Q ss_pred HhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhh
Q 010212 37 YDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASG 116 (515)
Q Consensus 37 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~ 116 (515)
..+..+....++..+++.. .+.+..-....+....+...+....--++.-|.-+|-...... ...+....+.
T Consensus 32 lpWN~fiTa~~y~~~~~~~-------~~~~~~F~~~~~~~a~i~~ll~~~~n~~~~~~~~~~~~~~l~~-~~il~i~~l~ 103 (406)
T KOG1479|consen 32 LPWNMFITASDYYYYRFPG-------YHNSKNFTSSYTLAAQIPLLLFNLLNAFLNTRLRTRVGYLLSL-IAILFIVTLD 103 (406)
T ss_pred cchHhhhccHHHHHhhcCC-------CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 4445555566666665511 1113333334444444445555555555555622222121111 1111122222
Q ss_pred hc---CCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 010212 117 LS---FGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKAN 193 (515)
Q Consensus 117 ~~---~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~ 193 (515)
++ .+......+...++.-.+.+++.|..........++ +|++.-...+ .+.+++..+..++.-.......
T Consensus 104 ~~~v~~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~-~P~~ytqavm----~G~a~aG~l~Sl~~i~tka~~~-- 176 (406)
T KOG1479|consen 104 LALVKTDTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAGL-FPSEYTQAVM----SGQALAGTLTSLLRILTKAAFS-- 176 (406)
T ss_pred HHhhccCCccchhHHHHHHHHHHHhhhhhhhccchhhhhhc-CCHHHHHHHH----hcchhHhHHHHHHHHHHHHhcC--
Confidence 22 222233446778888888999999888888887777 4555433222 3444444444444333222222
Q ss_pred CCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHhcCCchhh
Q 010212 194 FPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRMKMPETARY 242 (515)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~ 242 (515)
....+=...|.+..+..++.++....+|..|-.
T Consensus 177 ----------------~~~~sA~~yF~~s~~~~llC~i~y~~l~~lpf~ 209 (406)
T KOG1479|consen 177 ----------------DSRTSALIYFITSTVILLLCFVLYLVLPKLPFV 209 (406)
T ss_pred ----------------CCCceeehhHHHHHHHHHHHHHHHHHhhcchHH
Confidence 122334455666666666666666667776643
No 261
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.20 E-value=8.5e-08 Score=94.98 Aligned_cols=141 Identities=16% Similarity=0.155 Sum_probs=101.2
Q ss_pred HHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccc
Q 010212 346 QTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFV 425 (515)
Q Consensus 346 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (515)
......++.++|.++.|+++||+|||+.+..+..+..++.++..+.... ..+....+.-++.+++..+..+....
T Consensus 51 ~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~-----~~~~~~~~~R~~~G~~~g~~~~~~~~ 125 (451)
T PF00083_consen 51 LTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSY-----NNFWMLLIGRFLIGFGIGGAYVVSPI 125 (451)
T ss_pred HHHHHHhhhcccccccccccccccccccccccccccccccccccccccc-----cccccccccccccccccccccccccc
Confidence 5666778889999999999999999999999988888888777654411 12223333334444444445677888
Q ss_pred cccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhc---cCchHHHHHHHHHHHHHHHHHHhcccc
Q 010212 426 VPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADT---SGVKKALLILGGANFLGMLFTFLVPES 491 (515)
Q Consensus 426 ~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (515)
++.|..|++.|+...++.+....+|..++..+.-.+.+. .+|+..+.+..+..++..+...++||.
T Consensus 126 ~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~~pES 194 (451)
T PF00083_consen 126 YISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRFFLPES 194 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999999999988888887777665444332 348877777766666655555567765
No 262
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=98.12 E-value=0.0033 Score=63.04 Aligned_cols=160 Identities=15% Similarity=0.114 Sum_probs=117.9
Q ss_pred HHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhhHHHHHHHHHHHHHHHhhhcC
Q 010212 41 CISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDK-MGRKRVYGMTLMMMVICSLASGLSF 119 (515)
Q Consensus 41 ~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr-~Grr~~l~~~~~~~~i~~~~~~~~~ 119 (515)
....++..+..++ +.+...+.-..+.+.-......+.+++++|- +||-+++.++.++..++..+..++.
T Consensus 56 ~~~nlv~ylt~~~----------~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a 125 (571)
T KOG1237|consen 56 LVSNLVTYLTLEL----------HASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSA 125 (571)
T ss_pred chhHHHHHHHHHh----------ccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3466778888888 7877888888888888888899999999996 6888999998888887765443321
Q ss_pred CC-----------------C--chhHHHHHHHHHHHhhhccccccchhhHhhhhccc---ccc---chhHHHHHHHHHHH
Q 010212 120 GK-----------------E--PKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYAN---KKT---RGAFIAAVFAMQGF 174 (515)
Q Consensus 120 ~~-----------------~--~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~---~~~---r~~~~~~~~~~~~~ 174 (515)
.. . .......++.+.-+..+|.|+.-+...++-+|-++ +++ +...+..+....++
T Consensus 126 ~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~ 205 (571)
T KOG1237|consen 126 MIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNG 205 (571)
T ss_pred HhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHH
Confidence 10 0 01113467788888889999999999999999998 322 23567777778888
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHH
Q 010212 175 GILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWR 233 (515)
Q Consensus 175 G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~ 233 (515)
|..++..+.-+.- ++.+|.+.|.+..+..+++++++
T Consensus 206 g~l~a~t~~vyiq-----------------------~~~~w~lgf~i~~~~~~lai~iF 241 (571)
T KOG1237|consen 206 GALLAQTVLVYIQ-----------------------DNVGWKLGFGIPTVLNALAILIF 241 (571)
T ss_pred HHHHHHHHHHhhh-----------------------hcccceeeccHHHHHHHHHHHHH
Confidence 8887777766652 45679999998777666655544
No 263
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=98.07 E-value=4.9e-05 Score=73.00 Aligned_cols=114 Identities=14% Similarity=0.132 Sum_probs=87.0
Q ss_pred hHHHHHHHHHHHHHHHhhhc--CCC-CchhHHHHHHHHHHHhhhccccccchhhHhhhhccccc---cchhHHHHHHHHH
Q 010212 99 RVYGMTLMMMVICSLASGLS--FGK-EPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKK---TRGAFIAAVFAMQ 172 (515)
Q Consensus 99 ~~l~~~~~~~~i~~~~~~~~--~~~-~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~---~r~~~~~~~~~~~ 172 (515)
|++.++.++..+|.++..++ +.. +.....+.++++-.+.++|.|+.-|...++.+|.++++ +|.+.+.++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 56788888999998884443 221 01111367899999999999999999999999999866 4667788899999
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHHHHHHHh
Q 010212 173 GFGILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLTYYWRMK 235 (515)
Q Consensus 173 ~~G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~ 235 (515)
++|..++..+.+++. ++.||.+.|.+.++..+++++.++.
T Consensus 82 n~G~~~~~~~~~~i~-----------------------~~~~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQ-----------------------QNYGWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHCCCHHH-----------------------HCS-HHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhhHhhcccchhhc-----------------------cccchhhhhhHHHHHHHHHHHHHHh
Confidence 999999999988885 5677999999988888777665544
No 264
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.06 E-value=0.0001 Score=75.00 Aligned_cols=133 Identities=14% Similarity=0.001 Sum_probs=89.2
Q ss_pred hhHHHHHHHHHHh-hchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCch
Q 010212 355 VPGYWFTVALIDK-IGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPA 433 (515)
Q Consensus 355 ~~~~~~~g~l~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 433 (515)
-+..+++|++.|+ +|+++.+.++.++..++..++.+..................+.+...+..+.-|...+...|.+++
T Consensus 37 yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~ 116 (654)
T TIGR00926 37 YLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEE 116 (654)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCc
Confidence 3445578889996 799999999999988888877664311111111111122222333333344456666777777764
Q ss_pred h---hhhhhhHHHHHHhhhhHHHHHHHHHHhhhcc-------CchHHHHHHHHHHHHHHHHHHh
Q 010212 434 R---LRSTCHGISAASGKAGAIVGAFGFLYLADTS-------GVKKALLILGGANFLGMLFTFL 487 (515)
Q Consensus 434 ~---~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~-------g~~~~~~~~~~~~~~~~~~~~~ 487 (515)
+ .+-....+.....++|+.+++.+.+++.+.. +|..+|.+.+++.+++.++...
T Consensus 117 ~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~~ 180 (654)
T TIGR00926 117 RQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFMA 180 (654)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHHH
Confidence 3 4777888889999999999999999987443 5888888888888877776653
No 265
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.01 E-value=0.00044 Score=63.44 Aligned_cols=163 Identities=15% Similarity=0.039 Sum_probs=90.8
Q ss_pred HHHHhhhhhHHHhHhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHH
Q 010212 310 YYSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALA 389 (515)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~ 389 (515)
-+...-|.-.+.++.|+...+ ++. ..........+...+.|.+.||+|||+..+...++..++++.--
T Consensus 50 DWLQGpY~Y~LY~~yg~~~~q-----------Ia~-Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~ 117 (354)
T PF05631_consen 50 DWLQGPYLYALYESYGFSEHQ-----------IAI-LFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKH 117 (354)
T ss_pred HHhhcchhHHHHHHcCCCHHH-----------HHH-HHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHh
Confidence 333333333444556665544 222 44555556666667889999999999998888888887776542
Q ss_pred hhhhcccCCCchHHHHHHHHHHHHHhhcCccccccc-cccc----cCchhhhhhhhHHHHHH-hhhhHHHHHHHHHHhhh
Q 010212 390 IPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFV-VPAE----IFPARLRSTCHGISAAS-GKAGAIVGAFGFLYLAD 463 (515)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~p~~~~~~~~g~~~~~-~~~g~~i~~~~~~~l~~ 463 (515)
. +....+.+-=++.+.......+..=+ ++.| -+|++..+...+..... +.+-.+++..+...+.+
T Consensus 118 ~---------~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~ 188 (354)
T PF05631_consen 118 S---------SNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLAD 188 (354)
T ss_pred c---------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHH
Confidence 2 12222322223333322222222111 2233 35666666666655533 33445555566666666
Q ss_pred ccC--chHHHHHHHHHHHHHHHHHH-hccccCC
Q 010212 464 TSG--VKKALLILGGANFLGMLFTF-LVPESKG 493 (515)
Q Consensus 464 ~~g--~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 493 (515)
..+ ...+|.....+.+++.++.. ..+|..+
T Consensus 189 ~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg 221 (354)
T PF05631_consen 189 WFGFGPVAPFDAAIVLLAVAAVLILKTWPENYG 221 (354)
T ss_pred HhCCCCcchHHHHHHHHHHHHHHHHhcccccCC
Confidence 544 47788877777777777665 4455443
No 266
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.01 E-value=0.019 Score=56.41 Aligned_cols=162 Identities=10% Similarity=0.077 Sum_probs=96.0
Q ss_pred ccchhHHHHHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHH-HHHHHHHHHhhhhhh
Q 010212 16 KTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALC-GTLAGQLFFGWLGDK 94 (515)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l-~~~i~~~~~G~l~dr 94 (515)
+-.+..+..+..+.+..|+..+..... -.+.+.+.- .....+.+..+=....+ ...+...+..++++|
T Consensus 17 pi~~~E~~k~~~l~~m~f~i~f~y~~l----R~~KD~lvv-------t~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~ 85 (491)
T PF03219_consen 17 PIHRSELKKFLPLALMFFFILFNYTIL----RDLKDTLVV-------TAQGAEVIPFLKVWGVLPVAILFTILYSKLSNR 85 (491)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHH----HHhcCeEEE-------ecCChhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 334555566666666666666554333 222222200 01245556666554444 445668889999999
Q ss_pred hhhhhHHHHHHHHHHHHHHHhhhc--CC---CCchh--------------------HHHHHHHHHHHhhhccccccc-hh
Q 010212 95 MGRKRVYGMTLMMMVICSLASGLS--FG---KEPKA--------------------VMITLCFFRFWLGFGIGGDYP-LS 148 (515)
Q Consensus 95 ~Grr~~l~~~~~~~~i~~~~~~~~--~~---~~~~~--------------------~~~~l~~~r~l~G~~~g~~~~-~~ 148 (515)
++|++++-+....+.....++++. |+ .++.. ..|.+.+..+..-+-.....+ .-
T Consensus 86 ~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLF 165 (491)
T PF03219_consen 86 LSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLF 165 (491)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999776666665555555442 11 11100 011122222222222222222 35
Q ss_pred hHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010212 149 ATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSA 188 (515)
Q Consensus 149 ~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~ 188 (515)
..+..|.++.+|-.|..+++..+.++|.++++.+...+.+
T Consensus 166 W~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 166 WGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7788999999999999999999999999998888888876
No 267
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.99 E-value=0.00022 Score=69.38 Aligned_cols=122 Identities=12% Similarity=0.097 Sum_probs=109.3
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHh-hhhhhhhhhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccc
Q 010212 64 TLPDNVASAVNGVALCGTLAGQLFFG-WLGDKMGRKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIG 142 (515)
Q Consensus 64 ~~s~~~~g~~~s~~~l~~~i~~~~~G-~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g 142 (515)
++++.+.+...+.......+++++.. .+...+|-|+++..|+..-.+..++.+++++ .|+++....+.++. .
T Consensus 273 ~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~------~w~~~~~~v~~~~~-~ 345 (463)
T KOG2816|consen 273 GWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATE------TWMMFAAGVVVALA-G 345 (463)
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhcc------chhhhHHHHHHHhh-c
Confidence 89999999888888888888888887 7888899999999999999999999999999 68888888888885 5
Q ss_pred cccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 010212 143 GDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKA 192 (515)
Q Consensus 143 ~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~ 192 (515)
...+...+.++.+.+++++|++.++......+...++|.+-+.+...+..
T Consensus 346 ~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~t~~ 395 (463)
T KOG2816|consen 346 IVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFALTLD 395 (463)
T ss_pred chhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 66899999999999999999999999999999999999998888665553
No 268
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.76 E-value=0.0005 Score=64.58 Aligned_cols=121 Identities=15% Similarity=0.039 Sum_probs=78.4
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchH-HHHHHHHHHHHHhhcCccc
Q 010212 343 ARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRI-GFVVLYSLTFFFSNFGPNT 421 (515)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 421 (515)
+.+...++.+..++..+.+-|+.||+|-|....++....+++..+=.+......+ +..+ ........+..........
T Consensus 81 ~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~-~~f~~~l~~~Gq~iaa~Aq~Fim~ 159 (480)
T KOG2563|consen 81 ADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVP-PLFRRPLTHTGQSIAAAAQPFILG 159 (480)
T ss_pred HHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCcccc-ccchhhhhHHhHHHHHHhhhHhhc
Confidence 4446677777788888899999999999999999998888887765554421111 1111 1111111111111111111
Q ss_pred cccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhc
Q 010212 422 TTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADT 464 (515)
Q Consensus 422 ~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~ 464 (515)
...-+..--+|+++|+++..+..+.+.+|.+++.++.+.+..+
T Consensus 160 lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~ 202 (480)
T KOG2563|consen 160 LPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPS 202 (480)
T ss_pred cccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCC
Confidence 2222334458999999999999999999999998888777653
No 269
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=97.54 E-value=0.093 Score=50.46 Aligned_cols=160 Identities=11% Similarity=0.055 Sum_probs=99.0
Q ss_pred chhHHHHHHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHH-HHHHHHHHHhhhhhhhh
Q 010212 18 QWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALC-GTLAGQLFFGWLGDKMG 96 (515)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l-~~~i~~~~~G~l~dr~G 96 (515)
+++-+..+.-+++..++..+..+. +-.+.+.+.- ...+++.+.++=+..-+ +..+..++.+++.+++.
T Consensus 22 ~r~E~~kflpl~Ll~f~I~~ny~~----lR~lKDslvv-------~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt 90 (509)
T COG3202 22 RRYELKKFLPLALLFFCILFNYNL----LRSLKDSLVV-------TRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILT 90 (509)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHH----HHHhhhheEe-------ecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcC
Confidence 444555555555555555555433 3334444310 02345667777777777 67889999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHhhhcCC-----CCch-------------hH--------HHHHHHHHHHhhhccccccc-hhh
Q 010212 97 RKRVYGMTLMMMVICSLASGLSFG-----KEPK-------------AV--------MITLCFFRFWLGFGIGGDYP-LSA 149 (515)
Q Consensus 97 rr~~l~~~~~~~~i~~~~~~~~~~-----~~~~-------------~~--------~~~l~~~r~l~G~~~g~~~~-~~~ 149 (515)
|++++-..+..+....+++++.-. .++. +. .|..-+.....=+-...... .-.
T Consensus 91 ~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw 170 (509)
T COG3202 91 REKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFW 170 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHH
Confidence 999988777777777777765421 0000 00 01222222222222122222 345
Q ss_pred HhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010212 150 TIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSA 188 (515)
Q Consensus 150 ~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~ 188 (515)
....|.+..+|-.|..++++.+.+++..++..+..++.+
T Consensus 171 ~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 171 QFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred HHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 667888988999999999999999998888888877764
No 270
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.47 E-value=0.013 Score=57.13 Aligned_cols=109 Identities=9% Similarity=0.011 Sum_probs=71.7
Q ss_pred hhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCC------------------------chHHHHHHHH
Q 010212 354 TVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPD------------------------HRIGFVVLYS 409 (515)
Q Consensus 354 ~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~ 409 (515)
.++..++.+++++|++|++............+.++.+......+.- ..|.......
T Consensus 57 ~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv 136 (472)
T TIGR00769 57 AVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYV 136 (472)
T ss_pred HHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHH
Confidence 3333567899999999999887766666665555555432111110 0111122222
Q ss_pred HHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhh
Q 010212 410 LTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLA 462 (515)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~ 462 (515)
..-........-+.|.+++|.+..++..+-.++....+++|..+++.+..++.
T Consensus 137 ~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 137 MAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222222222277899999999999999999999999999999999988876
No 271
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=97.47 E-value=0.0013 Score=57.38 Aligned_cols=113 Identities=11% Similarity=0.056 Sum_probs=55.7
Q ss_pred HHHHHhhhhhHHHHHHHHHHh-hchhhHHHHHHHHHHHHHHHHHhhhhcc--cCCCchHHHHHHHHHHHHHhhcCccccc
Q 010212 347 TLIALCSTVPGYWFTVALIDK-IGRFAIQLMGFFFMTVFMFALAIPYHHW--TLPDHRIGFVVLYSLTFFFSNFGPNTTT 423 (515)
Q Consensus 347 ~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (515)
......+..+|.+..|...+. +.||+. +...+.+.+.+.++....... ...........++.++.+.+..+..++.
T Consensus 147 ~I~fv~g~~~G~~~ig~~nkt~~kRk~f-i~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~Vi 225 (267)
T PF07672_consen 147 QILFVAGYFLGPFTIGLWNKTNYKRKPF-IHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQGVI 225 (267)
T ss_pred HHHHHHHHhhhceeeccchhhhhhhhhH-HHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 344444445555556666554 344443 333322222222222211111 1111123445556666667777777777
Q ss_pred cccccccC--chhhhhhhhHHHHHHhhhhHHHHHHHHHH
Q 010212 424 FVVPAEIF--PARLRSTCHGISAASGKAGAIVGAFGFLY 460 (515)
Q Consensus 424 ~~~~~~~~--p~~~~~~~~g~~~~~~~~g~~i~~~~~~~ 460 (515)
.....|.- .|+..|...|+.-.++++.-.+.-.+...
T Consensus 226 L~lPhEyK~~~pk~ig~~Fg~iWGfGY~~yTi~~Ii~S~ 264 (267)
T PF07672_consen 226 LNLPHEYKGYNPKKIGIQFGLIWGFGYIFYTIYDIILSV 264 (267)
T ss_pred hcChhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666652 34566777777766666655554444433
No 272
>PRK03612 spermidine synthase; Provisional
Probab=97.32 E-value=0.019 Score=57.33 Aligned_cols=123 Identities=21% Similarity=0.216 Sum_probs=75.3
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHH-HHHHHH-HHHHHhhhcCCCCchhHHHHHHHHHHHhhhcc
Q 010212 64 TLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGM-TLMMMV-ICSLASGLSFGKEPKAVMITLCFFRFWLGFGI 141 (515)
Q Consensus 64 ~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~-~~~~~~-i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 141 (515)
|.+..+.+.+.+++.+|.++|+.+++++.++.-|+....- ...+.+ ++..+....... .......++..-++.++..
T Consensus 46 G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~~e~~i~l~~~~~~~ll~~~~~~-~~~~~~~~~~~~~~~~~l~ 124 (521)
T PRK03612 46 GDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVAVELLLALLGGLSALILYAAFAF-QGLSRLLLYVLVLLIGLLI 124 (521)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 7788889999999999999999999998755444432211 111111 111111111110 0000122344556677777
Q ss_pred ccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010212 142 GGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSA 188 (515)
Q Consensus 142 g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~ 188 (515)
|+..|....+..+... ++-++..|-.+....+|.++|.++.+++.-
T Consensus 125 G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~vLl 170 (521)
T PRK03612 125 GMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFLLL 170 (521)
T ss_pred HHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHHHH
Confidence 8877777776655332 234567788888899999999999887753
No 273
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.18 E-value=0.045 Score=52.91 Aligned_cols=112 Identities=19% Similarity=0.149 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHHHHHhhhhh---hhhhhhHHHHHHHHHHHHHHHhhhcCCCCc------------hhHHHHHHHHHHHhh
Q 010212 74 NGVALCGTLAGQLFFGWLGD---KMGRKRVYGMTLMMMVICSLASGLSFGKEP------------KAVMITLCFFRFWLG 138 (515)
Q Consensus 74 ~s~~~l~~~i~~~~~G~l~d---r~Grr~~l~~~~~~~~i~~~~~~~~~~~~~------------~~~~~~l~~~r~l~G 138 (515)
.-...+|..++..+.+.+.+ |+||++.+.++..+..++.++.-....+.. ...+...++.-++.|
T Consensus 285 ~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G 364 (461)
T KOG3098|consen 285 SIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLG 364 (461)
T ss_pred HHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHh
Confidence 33344455556666667765 488999999999888888887766432211 112567888899999
Q ss_pred hccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 010212 139 FGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIV 186 (515)
Q Consensus 139 ~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l 186 (515)
++.+......+.++.+.+ +++|..+.++.-.-..++..++.......
T Consensus 365 ~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~~ 411 (461)
T KOG3098|consen 365 FGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPYL 411 (461)
T ss_pred hHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 999999999999999999 56688899988888888777666555444
No 274
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.16 E-value=0.0027 Score=62.11 Aligned_cols=164 Identities=12% Similarity=0.075 Sum_probs=115.7
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhcC---C--CCchhHHHHHHHHHHH
Q 010212 62 PGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLSF---G--KEPKAVMITLCFFRFW 136 (515)
Q Consensus 62 ~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~---~--~~~~~~~~~l~~~r~l 136 (515)
..|.++...|.+..+..++..++..+..+..-+..-|+++..+.++.++.++.-.... | .+-+. .+-.+.--++
T Consensus 249 gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d-~~f~lgd~~l 327 (433)
T PF03092_consen 249 GPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPD-QWFALGDTIL 327 (433)
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCC-eEEEEEhHHH
Confidence 3468999999999999999999999999988888889999888888777666433221 1 00000 1222333445
Q ss_pred hhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHH
Q 010212 137 LGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWR 216 (515)
Q Consensus 137 ~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr 216 (515)
..+..+..+-....+++|.+|+..-|...++.....++|..++..++..+.+.++... .+..+-.
T Consensus 328 ~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~---------------~~f~~l~ 392 (433)
T PF03092_consen 328 EEVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTR---------------DDFSNLW 392 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCc---------------ccccchH
Confidence 5555566677778889999999999999999999999999999999999998877311 1112233
Q ss_pred HHHHHhHHHHHHHHHHHHhcCCchh
Q 010212 217 IILMFGAIPALLTYYWRMKMPETAR 241 (515)
Q Consensus 217 ~~f~~~~~~~~~~~~~~~~~~e~p~ 241 (515)
+..+++.+..++.+.+..++|+..+
T Consensus 393 ~lili~~~~~ll~l~ll~lLp~~~~ 417 (433)
T PF03092_consen 393 LLILICSVIQLLPLPLLFLLPPQKR 417 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCch
Confidence 4444555555666666667777543
No 275
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.15 E-value=0.029 Score=45.64 Aligned_cols=104 Identities=13% Similarity=0.059 Sum_probs=70.4
Q ss_pred HHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccc
Q 010212 350 ALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAE 429 (515)
Q Consensus 350 ~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (515)
......+..++.+.+.+++|.|+.++++.+...+-....... ....++...++.+++....+...-.++.+
T Consensus 46 ~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~~---------~~~~l~~~s~l~G~~~a~lW~aqg~ylt~ 116 (156)
T PF05978_consen 46 LYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFYP---------NSYTLYPASALLGFGAALLWTAQGTYLTS 116 (156)
T ss_pred HHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhh---------hHHHHHHHHHHHhhhhHHhhHhhhHHHHH
Confidence 333445566678889999999999999877776554443321 23344444444444444445555577788
Q ss_pred cCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhh
Q 010212 430 IFPARLRSTCHGISAASGKAGAIVGAFGFLYLA 462 (515)
Q Consensus 430 ~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~ 462 (515)
...++.+++..++...+.+.+.++|..+.-.+.
T Consensus 117 ~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 117 YSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred cCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888899999999999998888888876655443
No 276
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.13 E-value=0.0027 Score=44.64 Aligned_cols=60 Identities=18% Similarity=0.113 Sum_probs=44.9
Q ss_pred HHHHHHhhhhhHHHhHhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHH
Q 010212 308 VAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFF 379 (515)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~ 379 (515)
.......-|.+.++++.|+++.+.+. ...+..+..+++.++.|+++||.++++.......
T Consensus 14 ~~~g~~~Pfl~~~~~~~Gl~~~~iGi------------l~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~ 73 (77)
T PF12832_consen 14 AALGCLYPFLPLYLKQLGLSPSQIGI------------LSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSL 73 (77)
T ss_pred HHHHHHHhhhhHhhhhcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHH
Confidence 34455566778888888887776443 5666677788899999999999999888766543
No 277
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.09 E-value=0.0073 Score=61.17 Aligned_cols=149 Identities=14% Similarity=0.031 Sum_probs=103.8
Q ss_pred HHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccC--------------C--------------
Q 010212 347 TLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTL--------------P-------------- 398 (515)
Q Consensus 347 ~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~-------------- 398 (515)
...+-++..+...+..+...|..|-+.+-++.++++++.++..+....... +
T Consensus 138 ~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 217 (735)
T KOG3626|consen 138 ASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTN 217 (735)
T ss_pred eeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCcc
Confidence 333444555555567778888888888899999999999988876421100 0
Q ss_pred -------------Cc---hHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhh
Q 010212 399 -------------DH---RIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLA 462 (515)
Q Consensus 399 -------------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~ 462 (515)
.. .+..+++..++.+.+..-.+++..+|+-|...++......|+...+..+|-++|-.+.+.+.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l 297 (735)
T KOG3626|consen 218 LCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCL 297 (735)
T ss_pred ccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 01 12233333344455555567778889999999898999999999998888888877777665
Q ss_pred h----c--------------c-CchHHHHHHHHHHHHHHHHHHhccccCCCC
Q 010212 463 D----T--------------S-GVKKALLILGGANFLGMLFTFLVPESKGKS 495 (515)
Q Consensus 463 ~----~--------------~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (515)
. . . -|+..|++.+.+.++..+..+++|+..++.
T Consensus 298 ~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~lp~~ 349 (735)
T KOG3626|consen 298 KLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKELPKS 349 (735)
T ss_pred HeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccCccc
Confidence 3 1 1 166778888888888888888887766544
No 278
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=96.89 E-value=0.00021 Score=66.41 Aligned_cols=113 Identities=10% Similarity=-0.045 Sum_probs=2.9
Q ss_pred HHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhccc-----CCCchHHHHHHHHHHHHHhhcCcc
Q 010212 346 QTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWT-----LPDHRIGFVVLYSLTFFFSNFGPN 420 (515)
Q Consensus 346 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 420 (515)
......++..+|+.+.++..-+..+++.+.+..+.-.+..-++........ ..-.+.++.++..+..++.+.-..
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl~ 266 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYLS 266 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchhh
Confidence 566778888989887776432211233333222222222111111111100 000112222333344444444455
Q ss_pred ccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHH
Q 010212 421 TTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGF 458 (515)
Q Consensus 421 ~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~ 458 (515)
+..+.+..+..++++|..+-.+....-.+|-.+|..+.
T Consensus 267 tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls 304 (309)
T PF01733_consen 267 TLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLS 304 (309)
T ss_dssp HHHH----------------------------------
T ss_pred hceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67777888888888888887777777777776666543
No 279
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.81 E-value=0.14 Score=49.58 Aligned_cols=139 Identities=9% Similarity=0.024 Sum_probs=78.7
Q ss_pred HHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHH----HHHHHHhhhhcccCCC-chHHHHHHH---HHHHHHhhc
Q 010212 346 QTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTV----FMFALAIPYHHWTLPD-HRIGFVVLY---SLTFFFSNF 417 (515)
Q Consensus 346 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~ 417 (515)
..+.-.+..++.....|...||..|.+......+..-+ ++.++........... +.+.....+ .+.......
T Consensus 43 ygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~L 122 (432)
T PF06963_consen 43 YGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERL 122 (432)
T ss_pred HHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHH
Confidence 44445555666667888999999998876655443322 2222222111111110 111111111 111111111
Q ss_pred Ccccccccccc------ccC--chhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHH
Q 010212 418 GPNTTTFVVPA------EIF--PARLRSTCHGISAASGKAGAIVGAFGFLYLADTSGVKKALLILGGANFLGMLFTF 486 (515)
Q Consensus 418 ~~~~~~~~~~~------~~~--p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 486 (515)
+ .....+.. .+. +++.....++.+.-+-.+...++|++.|.+.+..++..+..+.++..+++.+.=+
T Consensus 123 a--s~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy 197 (432)
T PF06963_consen 123 A--SIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEY 197 (432)
T ss_pred H--HhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHH
Confidence 1 11111111 122 4566777788888888889999999999999988988888888888888876544
No 280
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.72 E-value=0.00028 Score=70.46 Aligned_cols=146 Identities=15% Similarity=0.024 Sum_probs=1.3
Q ss_pred HHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCC---------------------------
Q 010212 346 QTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLP--------------------------- 398 (515)
Q Consensus 346 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------- 398 (515)
+...+-++.++..++..++.+|.+|-+.+-.+.++++++.+++.+++......
T Consensus 43 i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~ 122 (539)
T PF03137_consen 43 ISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQA 122 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCccccccccccccccccccccccccccc
Confidence 56666677777777888888888888888899999999999988765421100
Q ss_pred ------------Cc---hHHHHHHHHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhh
Q 010212 399 ------------DH---RIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLAD 463 (515)
Q Consensus 399 ------------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~ 463 (515)
.. ...+.++.-++.+.+....+++..+|+-|..+++..+...|+......+|-++|-.+.+....
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~ 202 (539)
T PF03137_consen 123 SSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLR 202 (539)
T ss_dssp -----------------------------SSS------------------------------------------------
T ss_pred cCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHh
Confidence 00 112222233334444444567788999999999999999999999988888888777765543
Q ss_pred c---------------------cC-chHHHHHHHHHHHHHHHHHHhcccc
Q 010212 464 T---------------------SG-VKKALLILGGANFLGMLFTFLVPES 491 (515)
Q Consensus 464 ~---------------------~g-~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (515)
. .| |+..|++.+++.++..+..++.|+.
T Consensus 203 ~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~ 252 (539)
T PF03137_consen 203 IYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKK 252 (539)
T ss_dssp --------------------------------------------------
T ss_pred ceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 0 12 5666777777777776666655543
No 281
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=96.66 E-value=0.089 Score=50.06 Aligned_cols=126 Identities=10% Similarity=0.055 Sum_probs=80.4
Q ss_pred HHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccccccccCchhhhh
Q 010212 358 YWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPARLRS 437 (515)
Q Consensus 358 ~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 437 (515)
.+....+.|..+.|++++.+.+...+...++.+.. ....+-+.-++.+....+ -...++++=...|+++--
T Consensus 58 l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~--------sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq 128 (412)
T PF01770_consen 58 LLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGT--------SVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQ 128 (412)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHC--------cHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHH
Confidence 34667899999999999988888777777665543 233333333333333222 223445555556777777
Q ss_pred hhhHHHHHHhhhhHHHHHHHHHHhhh--ccCchHHHHHHHHHHHHHHHHHHhccccC
Q 010212 438 TCHGISAASGKAGAIVGAFGFLYLAD--TSGVKKALLILGGANFLGMLFTFLVPESK 492 (515)
Q Consensus 438 ~~~g~~~~~~~~g~~i~~~~~~~l~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (515)
++.+........|..++..++-.+.. ...+....++......++.+..+++|..+
T Consensus 129 ~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~~~ 185 (412)
T PF01770_consen 129 KVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLPMPK 185 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 88888888888888888887777765 33455555555555566666666776543
No 282
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=96.58 E-value=0.043 Score=52.11 Aligned_cols=113 Identities=15% Similarity=0.218 Sum_probs=82.1
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHH-----HHHHHHhhhcCCCCchhHHHHHHHHHHHhhh
Q 010212 65 LPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMM-----VICSLASGLSFGKEPKAVMITLCFFRFWLGF 139 (515)
Q Consensus 65 ~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~-----~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 139 (515)
....+..+....|.+|-.++.--...+ |+ |++.+.+.+-. .+.....-+.++ .|.+++.-+..|+
T Consensus 278 ~~r~~Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~l~s~~~fips------i~ivf~lif~eGL 347 (402)
T PF02487_consen 278 SPRDQYRWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLLLQSWYRFIPS------IWIVFVLIFYEGL 347 (402)
T ss_pred CHHHHHHHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHHHHHHHHHhhH------HHHHHHHHHHHHH
Confidence 345677788888888877764433222 33 33333222222 222223334555 7888899999999
Q ss_pred ccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 010212 140 GIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVS 187 (515)
Q Consensus 140 ~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~ 187 (515)
..|..+..+...+.|-.|+++|..+++....+-++|..++.+++-++-
T Consensus 348 lGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le 395 (402)
T PF02487_consen 348 LGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLE 395 (402)
T ss_pred hhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999988774
No 283
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=96.53 E-value=0.015 Score=55.78 Aligned_cols=117 Identities=11% Similarity=0.032 Sum_probs=80.1
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhcccC-CCchHHHHHHHHHHHHHhhcCccccccccccccCchh---hhhhhhHHHHHHh
Q 010212 372 AIQLMGFFFMTVFMFALAIPYHHWTL-PDHRIGFVVLYSLTFFFSNFGPNTTTFVVPAEIFPAR---LRSTCHGISAASG 447 (515)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~~~~~~g~~~~~~ 447 (515)
|.+.++.++..++.+++.+....... .........+...+...+..+.-|...++..|.++++ .|.+.........
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 46677888888888886665432211 1111223333333344555556677778888888754 5677788889999
Q ss_pred hhhHHHHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHHhc
Q 010212 448 KAGAIVGAFGFLYLADTSGVKKALLILGGANFLGMLFTFLV 488 (515)
Q Consensus 448 ~~g~~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 488 (515)
++|..++..+.+++.++.||...|.+.++..+++.+..+.-
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999988888887766644
No 284
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=96.13 E-value=0.17 Score=49.93 Aligned_cols=111 Identities=12% Similarity=0.076 Sum_probs=69.6
Q ss_pred hhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcc---cCCCc---------------------hHHHHHHH
Q 010212 353 STVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHW---TLPDH---------------------RIGFVVLY 408 (515)
Q Consensus 353 ~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~---------------------~~~~~~~~ 408 (515)
+.++...+-.++++++++.++..+..........++++..... ..++. .|...+..
T Consensus 71 ~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfY 150 (491)
T PF03219_consen 71 VAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFY 150 (491)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHH
Confidence 3344455778999999999987665555555555554432110 00100 11111112
Q ss_pred HHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhh
Q 010212 409 SLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLAD 463 (515)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~ 463 (515)
...-..+.....-+.|.+++|.++.++..+.+++.....++|.+++..+..++.+
T Consensus 151 v~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 151 VMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111122222222568899999999999999999999999999999998888776
No 285
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=96.10 E-value=0.036 Score=49.58 Aligned_cols=138 Identities=11% Similarity=-0.026 Sum_probs=82.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhh
Q 010212 70 ASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSA 149 (515)
Q Consensus 70 ~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~ 149 (515)
.|.+.-+-.+...+..+....+.||+---.=+.+..++.+.+.++.+++++ .++-+.+-.+..++.|.....-.
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s------~~~sL~GV~~aSissGlGEiTFL 137 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNS------VPMSLLGVVFASISSGLGEITFL 137 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccc------hhHHHhhhhhhhhcCCcceeehh
Confidence 455666666777777788888888854332244556677788888999998 68878888888888887766555
Q ss_pred HhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccCCCCCCccccCCCchHHHHHHHhHHHHHHH
Q 010212 150 TIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVSAAFKANFPAPIYSANPAASTVPEADYIWRIILMFGAIPALLT 229 (515)
Q Consensus 150 ~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~ 229 (515)
++-+. +|+. ..+-+..+.+...++|..--..+.+.. +..-|...++...+.++.
T Consensus 138 ~lss~-Y~~~----~i~~WSSGTGgAGliGa~SYa~lT~~~---------------------~~spk~Tlli~l~lP~lf 191 (409)
T KOG3880|consen 138 ALSSR-YPSI----VIAGWSSGTGGAGLIGASSYAFLTSWA---------------------NLSPKSTLLIMLFLPALF 191 (409)
T ss_pred hhhcc-CCCc----eeccccCCCCcchhhhhhHHHHHhhhc---------------------CCChhhHHHHHHHHHHHH
Confidence 55443 3322 333344444444455554444444322 234677777755444444
Q ss_pred HHHH-HhcCCc
Q 010212 230 YYWR-MKMPET 239 (515)
Q Consensus 230 ~~~~-~~~~e~ 239 (515)
.... +.++++
T Consensus 192 a~~yf~lL~~p 202 (409)
T KOG3880|consen 192 AFAYFFLLKSP 202 (409)
T ss_pred HHHHHheeCCC
Confidence 4444 444443
No 286
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=95.92 E-value=1.3 Score=40.44 Aligned_cols=102 Identities=16% Similarity=0.223 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhccc
Q 010212 78 LCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYAN 157 (515)
Q Consensus 78 ~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~ 157 (515)
.+.....+++.+.+.+++|-|+++.++.......-.. =+-+. +..++-.-...|++.+..+..--+|+++.-.
T Consensus 68 y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~-Nl~pr------~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~ 140 (390)
T KOG3097|consen 68 YLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAA-NLEPR------YETLVPAGLVLGMAAGPIWASKGTYLTPMGQ 140 (390)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHh-hcchh------HHhhccHHHhhccccccccccCcceecHHHH
Confidence 3444556666669999999999998887776543221 11222 7889999999999999999888888877654
Q ss_pred c--ccc---------hhHHHHHHHHHHHHHHHHHHHHHHH
Q 010212 158 K--KTR---------GAFIAAVFAMQGFGILSGGMVAIIV 186 (515)
Q Consensus 158 ~--~~r---------~~~~~~~~~~~~~G~~~g~~l~~~l 186 (515)
. +.| .+..+.+......+..+|..++..+
T Consensus 141 ~ya~~~~~q~~~~~~~~ffg~Ffii~~~~qv~gn~issli 180 (390)
T KOG3097|consen 141 NYANQRGEQAGDGMKVRFFGEFFIIFQCAQVWGNLISSLI 180 (390)
T ss_pred HHHHhhhhhccCceeeeehhHHHHHHHHHHHHHHHHHHHH
Confidence 2 234 3444555444444444444444333
No 287
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=95.86 E-value=0.13 Score=47.43 Aligned_cols=126 Identities=17% Similarity=0.203 Sum_probs=74.9
Q ss_pred HHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccCCCchHHHHHHHHHHHHHhhcCccccccc
Q 010212 346 QTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLPDHRIGFVVLYSLTFFFSNFGPNTTTFV 425 (515)
Q Consensus 346 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (515)
......+....+.+..|.+.||.|||+.+..+.....++.+....... .............+.......+...+
T Consensus 44 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~g~~~~~~~~~~~~ 117 (338)
T COG0477 44 LLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPN------VGLALLLILRLLQGLGGGGLLPVASA 117 (338)
T ss_pred HHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCcc------chHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 344444555555578999999999997777666543333223322220 11222222222233333344567778
Q ss_pred cccccCch-hhhhhhhHHHHH-HhhhhHHHHHHHHHHhhhc--cCchHHHHHHHHH
Q 010212 426 VPAEIFPA-RLRSTCHGISAA-SGKAGAIVGAFGFLYLADT--SGVKKALLILGGA 477 (515)
Q Consensus 426 ~~~~~~p~-~~~~~~~g~~~~-~~~~g~~i~~~~~~~l~~~--~g~~~~~~~~~~~ 477 (515)
+..|..|+ +.|+...+.... ....+..+++.+.+.+.+. .+|+..+......
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (338)
T COG0477 118 LLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALL 173 (338)
T ss_pred HHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence 88899887 678888888888 5777888888777666543 4566644444333
No 288
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=95.57 E-value=0.025 Score=53.64 Aligned_cols=152 Identities=14% Similarity=0.093 Sum_probs=88.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhHHHhHhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHh----hchhh
Q 010212 297 IGTTVTWFLLDVAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDK----IGRFA 372 (515)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~----~g~~~ 372 (515)
+......+...+.+.....+.+.+..+.|......+. .....-+.+++..++.|..+|| +||||
T Consensus 35 i~v~~ia~Gvqf~wA~elsy~tPyl~~lGvphk~~S~------------iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRR 102 (498)
T KOG0637|consen 35 ISVASIAAGVQFGWALELSYLTPYLQSLGVPHKWSSI------------IWLCGPLSGLLVQPLVGSASDRCTSRYGRRR 102 (498)
T ss_pred HHHHHHHHHHHHHHHHHhccccHHHHHcCCCcccccc------------cccccccccceeccccccccccccccccccc
Confidence 3334444444456666777888888888877665443 4444445566667788999997 67877
Q ss_pred HHHH-HHHHHHHHHHHHHhhhhc----ccCCC--chHHHHHHHHHHHH---HhhcCccccccccccccCchhhhhh-hhH
Q 010212 373 IQLM-GFFFMTVFMFALAIPYHH----WTLPD--HRIGFVVLYSLTFF---FSNFGPNTTTFVVPAEIFPARLRST-CHG 441 (515)
Q Consensus 373 ~~~~-~~~~~~~~~~~~~~~~~~----~~~~~--~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~p~~~~~~-~~g 441 (515)
..+. +.....+++++++..... ..... .....+.+..+... +.+-......-++..|+..++.+.+ +++
T Consensus 103 PfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans 182 (498)
T KOG0637|consen 103 PFILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANS 182 (498)
T ss_pred chHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccch
Confidence 6654 444555555555543321 11111 11122222222222 2222223345578888887777777 999
Q ss_pred HHHHHhhhhHHHHHHHHHH
Q 010212 442 ISAASGKAGAIVGAFGFLY 460 (515)
Q Consensus 442 ~~~~~~~~g~~i~~~~~~~ 460 (515)
....+..+|+.+|-.+.++
T Consensus 183 ~f~~f~avGnvLGY~~g~y 201 (498)
T KOG0637|consen 183 VFSFFMAVGNVLGYALGSY 201 (498)
T ss_pred hHHHHHHhcceeeeecccc
Confidence 9998888888887665553
No 289
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=95.38 E-value=1 Score=43.65 Aligned_cols=111 Identities=10% Similarity=0.047 Sum_probs=71.9
Q ss_pred hhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhcccC---------------CC----------chHHHHHH
Q 010212 353 STVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTL---------------PD----------HRIGFVVL 407 (515)
Q Consensus 353 ~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~----------~~~~~~~~ 407 (515)
++++..++-.++.+++.+.++..........++++++.......+ .+ +.|.....
T Consensus 74 ~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~ 153 (509)
T COG3202 74 SAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLF 153 (509)
T ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHH
Confidence 455666788899999999988776666666666666554321100 00 01222222
Q ss_pred HHHHHHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhh
Q 010212 408 YSLTFFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLAD 463 (515)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~ 463 (515)
....--.......-..|..+.|....++..+-+++.+...+++..++..+..++.+
T Consensus 154 Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 154 YIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 22221122222223567788999999999999999999999999999988888765
No 290
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=94.74 E-value=0.21 Score=35.54 Aligned_cols=73 Identities=10% Similarity=0.011 Sum_probs=56.1
Q ss_pred HHHHHHhhhhhHHHhHhcccCCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHH
Q 010212 308 VAYYSQNLFQKDIFTAIGWIPKAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFA 387 (515)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~ 387 (515)
+.-+..+...|...++.+++..+ +........++.++|.+...++.++.++++.+..+.+...+....
T Consensus 6 igRFayTplLP~M~~~~~ls~~~------------ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 73 (85)
T PF06779_consen 6 IGRFAYTPLLPLMQADGGLSLSQ------------AGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAA 73 (85)
T ss_pred hHHHHHHhHhHHHHHhcCCCHHH------------HHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 34455666788888887776655 333777888888899989998888888888888888888888888
Q ss_pred HHhhh
Q 010212 388 LAIPY 392 (515)
Q Consensus 388 ~~~~~ 392 (515)
+.+..
T Consensus 74 ma~~~ 78 (85)
T PF06779_consen 74 MALTH 78 (85)
T ss_pred HHHHh
Confidence 77654
No 291
>PRK03612 spermidine synthase; Provisional
Probab=94.15 E-value=1.3 Score=44.39 Aligned_cols=48 Identities=25% Similarity=0.358 Sum_probs=35.2
Q ss_pred hhhhhHHHHHHhhhhHHHHHHHHHHhhh-ccCchHHHHHHHHHHHHHHH
Q 010212 436 RSTCHGISAASGKAGAIVGAFGFLYLAD-TSGVKKALLILGGANFLGML 483 (515)
Q Consensus 436 ~~~~~g~~~~~~~~g~~i~~~~~~~l~~-~~g~~~~~~~~~~~~~~~~~ 483 (515)
.+...|-....+.+|+++|+++.+++.- ..|.....++.+.+.+++.+
T Consensus 143 ~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~ 191 (521)
T PRK03612 143 LGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAAL 191 (521)
T ss_pred hhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 4667888899999999999999988765 57766665555555544443
No 292
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=92.86 E-value=1.7 Score=40.68 Aligned_cols=35 Identities=14% Similarity=0.134 Sum_probs=20.9
Q ss_pred ccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHH
Q 010212 425 VVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFL 459 (515)
Q Consensus 425 ~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~ 459 (515)
.++..+..++..|-+........+.|.+++..++-
T Consensus 156 gwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~ifL 190 (510)
T KOG3574|consen 156 GWALTMLSRENLGYASTCQSVGQTAGYFLGNVVFL 190 (510)
T ss_pred HHHHHhcCHhhcCchhHHHHHHHhhhHHhhcceee
Confidence 34445556677666666666666667666655543
No 293
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=90.66 E-value=3 Score=40.87 Aligned_cols=118 Identities=9% Similarity=-0.032 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhh--hHHHH--HHHHHHHHHHHhhhcCCCC---chhHHHHHHHHHHHhhhcc
Q 010212 69 VASAVNGVALCGTLAGQLFFGWLGDKMGRK--RVYGM--TLMMMVICSLASGLSFGKE---PKAVMITLCFFRFWLGFGI 141 (515)
Q Consensus 69 ~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr--~~l~~--~~~~~~i~~~~~~~~~~~~---~~~~~~~l~~~r~l~G~~~ 141 (515)
..-.....+.+|-.+|..+..+.. .-++| ++++. .=+++.-..++|..-+..+ .-.+-+..++.-++.|+..
T Consensus 308 ~~~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltn 386 (437)
T TIGR00939 308 YPIICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSN 386 (437)
T ss_pred HHHHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhh
Confidence 345667777888888877654431 11222 33222 2223333333333221100 0011466777899999999
Q ss_pred ccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 010212 142 GGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVS 187 (515)
Q Consensus 142 g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~ 187 (515)
|-....+..+..+..+++||..+..+...+..+|..+|..++..+.
T Consensus 387 Gy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~~~ 432 (437)
T TIGR00939 387 GYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFLFV 432 (437)
T ss_pred hHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998876654
No 294
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=90.03 E-value=17 Score=34.26 Aligned_cols=54 Identities=4% Similarity=-0.026 Sum_probs=36.5
Q ss_pred ccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCchHHHHHHHHHHHHHH
Q 010212 429 EIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSGVKKALLILGGANFLGM 482 (515)
Q Consensus 429 ~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~ 482 (515)
|--++......++....+-.....+.|.+.|.+....+.+..-..+++-.++..
T Consensus 166 ~g~s~s~lt~mnatir~iDq~tn~Lapv~tg~Iitfvsl~~~~g~f~~w~~vsm 219 (503)
T KOG2601|consen 166 EGESPSVLTNMNATIRGIDQSTNLLAPVITGLIITFVSLRASAGTFAAWALVSM 219 (503)
T ss_pred CCCCHHHHhhcchhhhhhhhhhhchhhhhhcccceeechhhhhhhhHHHHHHHH
Confidence 333444445555677777777889999999999987777765555555555543
No 295
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=89.59 E-value=19 Score=36.73 Aligned_cols=134 Identities=17% Similarity=0.183 Sum_probs=84.6
Q ss_pred hhhhHHHHHHHHHHh-hchhhHHHHHHHHHHHHHHHHHhhhhccc----------C----C-CchHHH-HHHHHHH-HHH
Q 010212 353 STVPGYWFTVALIDK-IGRFAIQLMGFFFMTVFMFALAIPYHHWT----------L----P-DHRIGF-VVLYSLT-FFF 414 (515)
Q Consensus 353 ~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~----~-~~~~~~-~~~~~~~-~~~ 414 (515)
......+.+++++|. +||-+++.++..+..++++++........ . . ...... ++...+. ...
T Consensus 85 ~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~ 164 (571)
T KOG1237|consen 85 TQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIAL 164 (571)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHhee
Confidence 334455688999997 47888888888888888766655432110 0 0 011111 1111122 222
Q ss_pred hhcCccccccccccccCc----hhhhh--hhhHHHHHHhhhhHHHHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHH
Q 010212 415 SNFGPNTTTFVVPAEIFP----ARLRS--TCHGISAASGKAGAIVGAFGFLYLADTSGVKKALLILGGANFLGMLFTF 486 (515)
Q Consensus 415 ~~~~~~~~~~~~~~~~~p----~~~~~--~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 486 (515)
+..+.-|...+.-.|-++ .+.+. .-+.......+.|..++..+.-++.+..+|...|.+..+...++.++.+
T Consensus 165 G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~ 242 (571)
T KOG1237|consen 165 GAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFL 242 (571)
T ss_pred ccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHH
Confidence 334445666666677776 22233 5566777788889999999888888889999988888877777776655
No 296
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=88.88 E-value=23 Score=34.02 Aligned_cols=75 Identities=8% Similarity=0.081 Sum_probs=31.7
Q ss_pred HHHhhcCccccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhh--ccCchHHHHHHHHHHHHHHHHHHhc
Q 010212 412 FFFSNFGPNTTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLAD--TSGVKKALLILGGANFLGMLFTFLV 488 (515)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~--~~g~~~~~~~~~~~~~~~~~~~~~~ 488 (515)
...+........+..++ .+|+++....++-.+.++.+.+... ++.....+ ..+-..-|.+..++.++|.+++..+
T Consensus 127 ~~~a~a~~qgs~~G~a~-~~P~~ytqavm~G~a~aG~l~Sl~~-i~tka~~~~~~~sA~~yF~~s~~~~llC~i~y~~l 203 (406)
T KOG1479|consen 127 LNLANAVVQGSLYGLAG-LFPSEYTQAVMSGQALAGTLTSLLR-ILTKAAFSDSRTSALIYFITSTVILLLCFVLYLVL 203 (406)
T ss_pred Hhhhhhhhccchhhhhh-cCCHHHHHHHHhcchhHhHHHHHHH-HHHHHhcCCCCceeehhHHHHHHHHHHHHHHHHHh
Confidence 33333333344444444 4576765554444443333322222 22222222 2222233444455556666665533
No 297
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=88.02 E-value=1.4 Score=39.08 Aligned_cols=41 Identities=15% Similarity=-0.040 Sum_probs=25.8
Q ss_pred HHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHH
Q 010212 346 QTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMF 386 (515)
Q Consensus 346 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~ 386 (515)
.........++...+.|-+.||.|||+..+.-.+...++++
T Consensus 77 LfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCi 117 (454)
T KOG4332|consen 77 LFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCI 117 (454)
T ss_pred eeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHH
Confidence 33334444455555778899999999986655444444443
No 298
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=85.22 E-value=33 Score=32.08 Aligned_cols=119 Identities=15% Similarity=0.141 Sum_probs=71.3
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHH----HHHHHHH-HHHHHHhhhcCCCCchhHHHHHHHHHHHhh
Q 010212 64 TLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVY----GMTLMMM-VICSLASGLSFGKEPKAVMITLCFFRFWLG 138 (515)
Q Consensus 64 ~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l----~~~~~~~-~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G 138 (515)
|-+.-|.+.+.+.|.....+|+...-++.|.--.-+.+ ++|++.- ++..+-..|+.+. ...-+.+++.-++.|
T Consensus 39 G~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~--~~~~~Vly~lt~vIG 116 (508)
T COG4262 39 GGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALES--APSRLVLYALTAVIG 116 (508)
T ss_pred CCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhcc--chHHHHHHHHHHHHH
Confidence 55566889999999999999999999988854333222 2222221 1122222344432 112578888999999
Q ss_pred hccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 010212 139 FGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIV 186 (515)
Q Consensus 139 ~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l 186 (515)
.-.|...|..+.++.... .+-....+.....-.+|...+.++-.++
T Consensus 117 ~LVG~EiPL~mrml~~r~--a~~k~~~s~vl~~DYLGal~~gLl~p~l 162 (508)
T COG4262 117 VLVGAEIPLLMRMLQRRQ--AKAKDLGSRVLTLDYLGALAGGLLWPFL 162 (508)
T ss_pred HHHhcchHHHHHHHHHHH--HHHHhhhhhhhhhHhhhhhhHHHHHHHH
Confidence 989999999998887722 1111222222233556666555554443
No 299
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=84.19 E-value=20 Score=35.39 Aligned_cols=38 Identities=13% Similarity=0.050 Sum_probs=22.8
Q ss_pred ccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhh
Q 010212 425 VVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLA 462 (515)
Q Consensus 425 ~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~ 462 (515)
.++..+..++.++-+........++|.+++-.++-.+-
T Consensus 141 GWALT~Ls~~n~~~ASTcqtvG~~~Gyfls~tvFlaln 178 (544)
T PF13000_consen 141 GWALTMLSPENVGYASTCQTVGQTAGYFLSFTVFLALN 178 (544)
T ss_pred hhhhhhcChhhcchHHHHHHhHhhhhHHHHHHHHHhhC
Confidence 34445556677776665555555667666666655443
No 300
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=82.93 E-value=6.4 Score=36.95 Aligned_cols=78 Identities=14% Similarity=0.099 Sum_probs=46.7
Q ss_pred HHHHHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHH
Q 010212 25 IVIAGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMT 104 (515)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~ 104 (515)
.+.+.+++++.-..--.+...+...+.++. +-|-.....-...-.....+..++.|...|+..|+|++...
T Consensus 29 ~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~---------gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~ 99 (503)
T KOG2601|consen 29 VIFLYLGYFLTTWGDRMWEFSVSLFMILLG---------GNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTW 99 (503)
T ss_pred eehhhHHHHHhHhhHhHHHHHHHHHHHHHc---------CceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHH
Confidence 345556666655555566666666665552 21222222223333345567778889999999999998877
Q ss_pred HHHHHHH
Q 010212 105 LMMMVIC 111 (515)
Q Consensus 105 ~~~~~i~ 111 (515)
+.+--++
T Consensus 100 L~lqNlS 106 (503)
T KOG2601|consen 100 LLLQNLS 106 (503)
T ss_pred HhhccHH
Confidence 6654333
No 301
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=82.21 E-value=3.8 Score=32.90 Aligned_cols=34 Identities=6% Similarity=0.041 Sum_probs=26.1
Q ss_pred cccccccccccCchhhhhhhhHHHHHHhhhhHHH
Q 010212 420 NTTTFVVPAEIFPARLRSTCHGISAASGKAGAIV 453 (515)
Q Consensus 420 ~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i 453 (515)
..+.|.+.+-...++..|+..|+-.+-.|++...
T Consensus 112 lGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 112 LGISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred HhhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 3456677777888888999999998888876543
No 302
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=79.86 E-value=4.8 Score=36.65 Aligned_cols=113 Identities=10% Similarity=0.065 Sum_probs=79.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhhhhh-hhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccc
Q 010212 68 NVASAVNGVALCGTLAGQLFFGWLGDKMGR-KRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYP 146 (515)
Q Consensus 68 ~~~g~~~s~~~l~~~i~~~~~G~l~dr~Gr-r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~ 146 (515)
.|.-|....|.+|-.+..--.-..--++=+ -.++.+-.+++.+...+..+.++ ++..++.-+..|+-.|..+.
T Consensus 288 sqYRwyqvlYQlGVFiSRSS~~~~~~p~l~~LailQ~vNl~ff~~~a~~~ftps------i~ivf~lI~~EGLlGGasYV 361 (409)
T KOG3880|consen 288 SQYRWYQVLYQLGVFISRSSINLFTMPYLWLLAILQFVNLLFFLLQAWYWFTPS------IWIVFALILFEGLLGGASYV 361 (409)
T ss_pred hcchhhheeeeeeEEEEeccceEEechHHHHHHHHHHHHHHHHHHHHHHHhccH------HHHHHHHHHHHhhcCchHHH
Confidence 357788888888765432222211111111 12233344455566667777888 78888899999998888888
Q ss_pred hhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 010212 147 LSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIV 186 (515)
Q Consensus 147 ~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l 186 (515)
...--+.+-.++++|-.+++....+-++|..++.+++-.+
T Consensus 362 NTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 362 NTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 8888888888889999999999999999998888887655
No 303
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=79.62 E-value=25 Score=31.34 Aligned_cols=109 Identities=16% Similarity=0.171 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhhHHH----HHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhcccc
Q 010212 69 VASAVNGVALCGTLAGQLFFGWLGDK-MGRKRVYG----MTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGG 143 (515)
Q Consensus 69 ~~g~~~s~~~l~~~i~~~~~G~l~dr-~Grr~~l~----~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 143 (515)
......-++..|..+|.+..|+.... +-||+-+. .+.+++.+..++ +....++....+..+++.-|+.|++.=+
T Consensus 142 ~~~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~-~~~~g~~~~~~~~~f~I~~Fl~G~f~Wg 220 (267)
T PF07672_consen 142 IIPIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVV-VYFVGPGNAAGFAFFYIFGFLAGFFLWG 220 (267)
T ss_pred hhHHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHH-HHHhCcchHHHHHHHHHHHHHHHHHHHh
Confidence 33455666677777787888888774 55665443 344555555444 3222222222367788888899887544
Q ss_pred ccchhhHhhhhccccccchhHHHHHHHHHHHHHHHH
Q 010212 144 DYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSG 179 (515)
Q Consensus 144 ~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g 179 (515)
..++....=-| ++...+.+..-.++..+++|.++-
T Consensus 221 iQ~ViL~lPhE-yK~~~pk~ig~~Fg~iWGfGY~~y 255 (267)
T PF07672_consen 221 IQGVILNLPHE-YKGYNPKKIGIQFGLIWGFGYIFY 255 (267)
T ss_pred hhHHHhcChhh-hcCCCcceehhHHHHHHHHHHHHH
Confidence 44444433333 222223333334445556665543
No 304
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=74.88 E-value=0.96 Score=42.07 Aligned_cols=115 Identities=10% Similarity=0.127 Sum_probs=3.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhh-hhhhhHHHH--HHHHHHHHHHHhhhcCCCC----chhHHHHHHHHHHHhhhccccc
Q 010212 72 AVNGVALCGTLAGQLFFGWLGDK-MGRKRVYGM--TLMMMVICSLASGLSFGKE----PKAVMITLCFFRFWLGFGIGGD 144 (515)
Q Consensus 72 ~~~s~~~l~~~i~~~~~G~l~dr-~Grr~~l~~--~~~~~~i~~~~~~~~~~~~----~~~~~~~l~~~r~l~G~~~g~~ 144 (515)
.....|.++-.+|..+.++.--+ -.+|++... .=+++.-..++|..-++.+ .-.+-+..++.-++.|+..|-.
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl 265 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYL 265 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchh
Confidence 45667888888888887764211 134444332 1222222222221111100 0011366788899999999999
Q ss_pred cchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 010212 145 YPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIV 186 (515)
Q Consensus 145 ~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l 186 (515)
....+.+..+..++++|..+..+......+|..+|..++..+
T Consensus 266 ~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~~ 307 (309)
T PF01733_consen 266 STLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFLL 307 (309)
T ss_dssp -HHHH-------------------------------------
T ss_pred hhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999998888888889988888876543
No 305
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=70.68 E-value=37 Score=31.88 Aligned_cols=95 Identities=8% Similarity=-0.103 Sum_probs=68.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHH--HHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccch
Q 010212 70 ASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYG--MTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPL 147 (515)
Q Consensus 70 ~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~--~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~ 147 (515)
-|..-++..+..+++.+..|++--++.|..-++ ++.+..+...++++.+.+ .|..+++.++.+.......+.
T Consensus 273 NG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~------Iw~~Ya~yvlfr~~y~l~iti 346 (433)
T KOG3810|consen 273 NGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQH------IWVCYAGYVLFRVIYQLTITI 346 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccc------eehhhhhHHHHHhhHhhhhhH
Confidence 456667777888999999999999888864433 343333444444455555 788888888877777777888
Q ss_pred hhHhhhhccccccchhHHHHHHH
Q 010212 148 SATIMSEYANKKTRGAFIAAVFA 170 (515)
Q Consensus 148 ~~~~i~e~~~~~~r~~~~~~~~~ 170 (515)
+..-+++....+.-|..+|+...
T Consensus 347 A~~~iA~nL~~e~~gLvFGiNTF 369 (433)
T KOG3810|consen 347 ATFQIARNLSSELFGLVFGINTF 369 (433)
T ss_pred HHHHHHHhhhhhhheeeeehHHH
Confidence 88888888888878887776543
No 306
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=67.90 E-value=18 Score=26.84 Aligned_cols=33 Identities=21% Similarity=0.001 Sum_probs=19.8
Q ss_pred hHHHHHHHHHHhh-chhhHHHHHHHHHHHHHHHH
Q 010212 356 PGYWFTVALIDKI-GRFAIQLMGFFFMTVFMFAL 388 (515)
Q Consensus 356 ~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~ 388 (515)
+.....||+.||+ |.+++-++.+++.+.+...+
T Consensus 57 lVGa~iG~llD~~agTsPwglIv~lllGf~AG~l 90 (116)
T COG5336 57 LVGAGIGWLLDKFAGTSPWGLIVFLLLGFGAGVL 90 (116)
T ss_pred HHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Confidence 3334678999996 56666555555544444433
No 307
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=67.00 E-value=84 Score=27.14 Aligned_cols=25 Identities=8% Similarity=0.179 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Q 010212 165 IAAVFAMQGFGILSGGMVAIIVSAA 189 (515)
Q Consensus 165 ~~~~~~~~~~G~~~g~~l~~~l~~~ 189 (515)
-.......-++..+|..++..+.+.
T Consensus 164 ~~~~~~~~i~~f~~Ga~~ga~l~~~ 188 (209)
T PF06912_consen 164 RALRYLLIILSFFIGAILGALLYRR 188 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344455556666667777666543
No 308
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=66.36 E-value=25 Score=26.11 Aligned_cols=34 Identities=15% Similarity=0.183 Sum_probs=28.3
Q ss_pred hhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccC
Q 010212 433 ARLRSTCHGISAASGKAGAIVGAFGFLYLADTSG 466 (515)
Q Consensus 433 ~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g 466 (515)
++.++.+.++-...-.+++++.....|++.|++-
T Consensus 37 ~s~k~~~~a~klssefIsGilVGa~iG~llD~~a 70 (116)
T COG5336 37 ESIKGYAQAFKLSSEFISGILVGAGIGWLLDKFA 70 (116)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4667888888888888999999999999999653
No 309
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=64.06 E-value=31 Score=25.90 Aligned_cols=41 Identities=20% Similarity=0.289 Sum_probs=26.1
Q ss_pred CCCCCCccccCCCchHHHHHHHhHHHHHH-HHHHHHhcCCch
Q 010212 200 SANPAASTVPEADYIWRIILMFGAIPALL-TYYWRMKMPETA 240 (515)
Q Consensus 200 ~~~~~~~~~~~~~~~wr~~f~~~~~~~~~-~~~~~~~~~e~p 240 (515)
..+|...+...+..+|+.+|+++...+++ +.+.+.+.||+.
T Consensus 44 ~~~p~~~G~~~d~e~we~~~f~~~~~~~v~~~~~~~y~PD~~ 85 (105)
T PF10183_consen 44 GKNPPSPGEKRDWEGWELPFFFGFSGSLVFGGVFLAYKPDTS 85 (105)
T ss_pred CCCCCcCCCcchHhhhHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 33444434445778999999986655544 455566778764
No 310
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=62.62 E-value=61 Score=24.04 Aligned_cols=27 Identities=15% Similarity=0.089 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 010212 165 IAAVFAMQGFGILSGGMVAIIVSAAFK 191 (515)
Q Consensus 165 ~~~~~~~~~~G~~~g~~l~~~l~~~~~ 191 (515)
+|.......+..++|..+|-++...++
T Consensus 45 ~g~IG~~~v~pil~G~~lG~WLD~~~~ 71 (100)
T TIGR02230 45 FGLIGWSVAIPTLLGVAVGIWLDRHYP 71 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 444455555666667777777765544
No 311
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=58.65 E-value=1.3e+02 Score=26.70 Aligned_cols=28 Identities=18% Similarity=0.044 Sum_probs=16.8
Q ss_pred hhHHHHHHHHHHhhchhhHHHHHHHHHH
Q 010212 355 VPGYWFTVALIDKIGRFAIQLMGFFFMT 382 (515)
Q Consensus 355 ~~~~~~~g~l~d~~g~~~~~~~~~~~~~ 382 (515)
.++.+.+-+++.|+.-|++.+.+..+..
T Consensus 254 ~lAVigGk~lAskIS~rtVt~~ggi~Fi 281 (294)
T KOG2881|consen 254 GLAVIGGKYLASKISVRTVTLIGGILFI 281 (294)
T ss_pred HHHHhhhHHHhhhheeEEEEEecchhHH
Confidence 3333345567888887877666544433
No 312
>PRK10263 DNA translocase FtsK; Provisional
Probab=55.02 E-value=96 Score=34.85 Aligned_cols=21 Identities=19% Similarity=0.061 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHhhhhhhhhh
Q 010212 77 ALCGTLAGQLFFGWLGDKMGR 97 (515)
Q Consensus 77 ~~l~~~i~~~~~G~l~dr~Gr 97 (515)
..++..+|+.+...+..-||-
T Consensus 61 ~Nl~GiVGA~LAD~L~~LFGl 81 (1355)
T PRK10263 61 HNLGGMPGAWLADTLFFIFGV 81 (1355)
T ss_pred ccccchHHHHHHHHHHHHHhH
Confidence 345555666666666656664
No 313
>PRK10263 DNA translocase FtsK; Provisional
Probab=51.46 E-value=2.7e+02 Score=31.55 Aligned_cols=21 Identities=14% Similarity=0.151 Sum_probs=9.8
Q ss_pred hHHHHHHHHHHhhhccCchHH
Q 010212 450 GAIVGAFGFLYLADTSGVKKA 470 (515)
Q Consensus 450 g~~i~~~~~~~l~~~~g~~~~ 470 (515)
|+++|..+...+...+|....
T Consensus 143 GGIIG~lLs~lL~~LfG~vGa 163 (1355)
T PRK10263 143 GGVIGSLLSTTLQPLLHSSGG 163 (1355)
T ss_pred cchHHHHHHHHHHHHHhHHHH
Confidence 455555555444444443333
No 314
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=51.22 E-value=2.2e+02 Score=30.12 Aligned_cols=22 Identities=23% Similarity=0.345 Sum_probs=14.9
Q ss_pred HHHHHhhhhhHHHHHHHHHHhh
Q 010212 347 TLIALCSTVPGYWFTVALIDKI 368 (515)
Q Consensus 347 ~~~~~~~~~~~~~~~g~l~d~~ 368 (515)
.....+..++..++.-.+.||.
T Consensus 163 sl~l~i~~l~~p~~~q~viD~V 184 (709)
T COG2274 163 SLLLQLLALATPLFSQIVIDKV 184 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHhh
Confidence 3444455666777888888985
No 315
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=50.17 E-value=1.1e+02 Score=29.42 Aligned_cols=27 Identities=19% Similarity=0.171 Sum_probs=11.7
Q ss_pred chhhhhhhhHHHHHHhhhhHHHHHHHHH
Q 010212 432 PARLRSTCHGISAASGKAGAIVGAFGFL 459 (515)
Q Consensus 432 p~~~~~~~~g~~~~~~~~g~~i~~~~~~ 459 (515)
|++.++. ........|.+..--|++..
T Consensus 90 ~~~~~~~-~~~~~~~~N~~~lglpi~~~ 116 (385)
T PF03547_consen 90 PKEWRGV-FVLAASFGNTGFLGLPILQA 116 (385)
T ss_pred CcccceE-EEecccCCcchhhHHHHHHH
Confidence 4344443 23333345555544444443
No 316
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=49.24 E-value=2.3e+02 Score=26.63 Aligned_cols=28 Identities=18% Similarity=0.206 Sum_probs=19.7
Q ss_pred hhHHHHHHHHHHhhchhhHHHHHHHHHH
Q 010212 355 VPGYWFTVALIDKIGRFAIQLMGFFFMT 382 (515)
Q Consensus 355 ~~~~~~~g~l~d~~g~~~~~~~~~~~~~ 382 (515)
+...++.+.+++++|-|+.+.++.....
T Consensus 72 ~~s~m~~~~~Ir~~g~K~tm~lav~~Y~ 99 (390)
T KOG3097|consen 72 IDSSMFMPLLIRFLGTKWTMVLAVFPYA 99 (390)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 3344455689999999999877654443
No 317
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=49.13 E-value=3e+02 Score=27.92 Aligned_cols=24 Identities=8% Similarity=0.180 Sum_probs=14.1
Q ss_pred HHHHHhhhhhHHHHHHHHHHhhch
Q 010212 347 TLIALCSTVPGYWFTVALIDKIGR 370 (515)
Q Consensus 347 ~~~~~~~~~~~~~~~g~l~d~~g~ 370 (515)
.....+.+++++..++++-..++.
T Consensus 303 i~~y~~~~~iaGy~S~~~yk~~~g 326 (521)
T PF02990_consen 303 IILYALTSFIAGYVSARLYKSFGG 326 (521)
T ss_pred HHHHHHHhhHHHHHHHHHHHHcCC
Confidence 344455556666666666666654
No 318
>COG3619 Predicted membrane protein [Function unknown]
Probab=48.35 E-value=1.9e+02 Score=25.37 Aligned_cols=123 Identities=13% Similarity=0.165 Sum_probs=57.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhhhhhh-hhH--HHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhh-----
Q 010212 67 DNVASAVNGVALCGTLAGQLFFGWLGDKMGR-KRV--YGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLG----- 138 (515)
Q Consensus 67 ~~~~g~~~s~~~l~~~i~~~~~G~l~dr~Gr-r~~--l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G----- 138 (515)
+...........+...+|......+..|..| ..+ ...+.++..+..+..++.++.. .+....+..-|.+|
T Consensus 54 ~~~~a~~~~~pii~Fv~Gv~~~~~~~r~~~~~~~~~l~~~~~ll~~~v~~~~~~~p~~~--~~~~~~il~~f~mg~Qnas 131 (226)
T COG3619 54 DAALAVLLLLPILAFVLGVAAAELISRRATRSFIPVLLLVSLLLALIALLALGFIPESS--PDFVAVILVAFAMGIQNAS 131 (226)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhcccccc--hHHHHHHHHHHHHHHHHHH
Confidence 4455666777777778886666666666654 222 2333333333334444433211 11333344444444
Q ss_pred ------hccccccchh-----hHhhhhcccccc-chhHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 010212 139 ------FGIGGDYPLS-----ATIMSEYANKKT-RGAFIAAVFAMQGFGILSGGMVAIIVSAAFK 191 (515)
Q Consensus 139 ------~~~g~~~~~~-----~~~i~e~~~~~~-r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~ 191 (515)
.+.+..+... ..-+.++...|+ ....-...+...-++.+.|.+.++.+...++
T Consensus 132 f~k~~g~~~~~t~~TGnl~~~~~~l~~~l~~k~~~~~~~~~~~~~~il~f~~GAi~g~ll~~~~g 196 (226)
T COG3619 132 FRKVGGAPYGTTYVTGNLKSAGRGLGRYLSGKDKEKLRDWLIYLSLILSFIVGAICGALLTLFFG 196 (226)
T ss_pred HHHhcCccccchhhhhhHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3322222111 112334443321 2223344455556667777777777765444
No 319
>COG1288 Predicted membrane protein [Function unknown]
Probab=46.60 E-value=2.9e+02 Score=26.98 Aligned_cols=24 Identities=13% Similarity=0.081 Sum_probs=15.8
Q ss_pred CCCchHHHHHHHhHHHHHHHHHHH
Q 010212 210 EADYIWRIILMFGAIPALLTYYWR 233 (515)
Q Consensus 210 ~~~~~wr~~f~~~~~~~~~~~~~~ 233 (515)
.+..+||...++......+..+.+
T Consensus 213 ~sG~~~Riv~~v~~~~~~i~y~~~ 236 (481)
T COG1288 213 LSGMGLRIVVWVVFTLISIIYVYW 236 (481)
T ss_pred cccchHHHHHHHHHHHHHHHHHHH
Confidence 356789999998666555544443
No 320
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=46.54 E-value=2.1e+02 Score=30.29 Aligned_cols=49 Identities=29% Similarity=0.223 Sum_probs=33.9
Q ss_pred hhhhhh----hhhhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccc
Q 010212 89 GWLGDK----MGRKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIG 142 (515)
Q Consensus 89 G~l~dr----~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g 142 (515)
+-++|. -||.+-++++.+++.++++...+...+ .+.+..+-++.+++.+
T Consensus 44 ~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~-----p~lf~~~l~~~tf~~~ 96 (704)
T TIGR01666 44 AALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGK-----PWLFAVGLTVSTFGFI 96 (704)
T ss_pred hccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----cHHHHHHHHHHHHHHH
Confidence 556663 567777889999999999888877664 4556655555555433
No 321
>PRK11469 hypothetical protein; Provisional
Probab=45.74 E-value=1.9e+02 Score=24.57 Aligned_cols=42 Identities=17% Similarity=0.076 Sum_probs=24.0
Q ss_pred HHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHH
Q 010212 346 QTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFA 387 (515)
Q Consensus 346 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~ 387 (515)
......+....|..++.++.+++++|..+..+.++..++.-.
T Consensus 140 ig~~s~~~~~~G~~lG~~~g~~~g~~a~~lgG~iLI~iGi~i 181 (188)
T PRK11469 140 IGCATLIMSTLGMMVGRFIGSIIGKKAEILGGLVLIGIGVQI 181 (188)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444445555555666667777776666665555555443
No 322
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=45.10 E-value=2.7e+02 Score=26.23 Aligned_cols=12 Identities=8% Similarity=-0.061 Sum_probs=4.4
Q ss_pred HHHHHHHHHHHH
Q 010212 475 GGANFLGMLFTF 486 (515)
Q Consensus 475 ~~~~~~~~~~~~ 486 (515)
+.++++..++.+
T Consensus 292 af~lIiiG~vvy 303 (334)
T PF06027_consen 292 AFALIIIGFVVY 303 (334)
T ss_pred HHHHHHHHhheE
Confidence 333333333333
No 323
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=44.76 E-value=1.3e+02 Score=24.45 Aligned_cols=49 Identities=16% Similarity=0.241 Sum_probs=34.7
Q ss_pred HHHHHHHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHH
Q 010212 127 MITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILS 178 (515)
Q Consensus 127 ~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~ 178 (515)
+..+++.-.+.|+|. ..+.+.+++--.++++-|..+|+-.+-.+++-+.
T Consensus 97 ~~~~~~S~~~Fg~gl---lGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 97 WAVLLVSLVFFGLGL---LGISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred hHHHHHHHHHHHHHH---HhhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 455566655555542 4566777777788888899999988888877654
No 324
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=44.21 E-value=2.1e+02 Score=30.31 Aligned_cols=51 Identities=29% Similarity=0.264 Sum_probs=34.8
Q ss_pred HHhhhhhh----hhhhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccc
Q 010212 87 FFGWLGDK----MGRKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIG 142 (515)
Q Consensus 87 ~~G~l~dr----~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g 142 (515)
+.+-++|. -||.+-++++..++.++++...+...+ .+.+...-++.+++.+
T Consensus 42 ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~~~-----p~~~~~~l~~~tf~~~ 96 (701)
T TIGR01667 42 IAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLFPK-----PWLFPFLLTLLTFGFI 96 (701)
T ss_pred HhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----hHHHHHHHHHHHHHHH
Confidence 34445553 467788999999999999988887764 4555555555555433
No 325
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=42.49 E-value=8.3 Score=34.09 Aligned_cols=59 Identities=14% Similarity=-0.013 Sum_probs=0.0
Q ss_pred hhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHHhccccC
Q 010212 434 RLRSTCHGISAASGKAGAIVGAFGFLYLADTSGVKKALLILGGANFLGMLFTFLVPESK 492 (515)
Q Consensus 434 ~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (515)
+.-++.--+..++-.+.-.+.-++...+.....|....=++-.+.++++++++++.+.+
T Consensus 131 ~~GAs~WtiLaFcLAF~LaivlLIIAv~L~qaWfT~L~dL~WL~LFlaiLIWlY~H~~~ 189 (381)
T PF05297_consen 131 ELGASFWTILAFCLAFLLAIVLLIIAVLLHQAWFTILVDLYWLLLFLAILIWLYVHDQR 189 (381)
T ss_dssp -----------------------------------------------------------
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 44444333333333333333334444444332222222222233344444555555544
No 326
>PF03606 DcuC: C4-dicarboxylate anaerobic carrier; InterPro: IPR018385 Escherichia coli contains four different secondary carriers (DcuA, DcuB, DcuC, and DctA) for C4-dicarboxylates [, , , ] DcuA is used for aerobic growth on C4-dicarboxylates [, ], whereas the Dcu carriers (encoded by the dcuA, dcuB, and dcuC genes) are used under anaerobic conditions and form a distinct family of carriers [, , , , , ]. Each of the Dcu carriers is able to catalyze the uptake, antiport, and possibly also efflux of C4-dicarboxylates. DcuB is the major C4-dicarboxylate carrier for fumarate respiration with high fumarate-succinate exchange activity. It is synthesized only in the absence of oxygen and nitrate and in the presence of C4-dicarboxylates [, , , ]. DcuA is expressed constitutively in aerobic and anaerobic growth and can substitute for DcuB [, ]. These proteins are members of the C4-dicarboxylate Uptake C (DcuC) family. DcuC has 12 GES predicted transmembrane regions, is induced only under anaerobic conditions, and is not repressed by glucose. DcuC may therefore function as a succinate efflux system during anaerobic glucose fermentation. However, when overexpressed, it can replace either DcuA or DcuB in catalyzing fumarate-succinate exchange and fumarate uptake [, ]. DcuC shows the same transport modes as DcuA and DcuB (exchange, uptake, and presumably efflux of C4-dicarboxylates) [].; GO: 0016021 integral to membrane
Probab=37.53 E-value=1.4e+02 Score=29.78 Aligned_cols=14 Identities=21% Similarity=0.062 Sum_probs=8.0
Q ss_pred HHHHHhhchhhHHH
Q 010212 362 VALIDKIGRFAIQL 375 (515)
Q Consensus 362 g~l~d~~g~~~~~~ 375 (515)
..+.+|+++|+...
T Consensus 105 ~~l~k~l~~~~~~~ 118 (465)
T PF03606_consen 105 NLLIKPLKGKKNPL 118 (465)
T ss_pred HHHHHHhcCCcchh
Confidence 45667776654433
No 327
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=36.85 E-value=70 Score=23.92 Aligned_cols=52 Identities=13% Similarity=0.090 Sum_probs=42.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhcC
Q 010212 68 NVASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLSF 119 (515)
Q Consensus 68 ~~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~ 119 (515)
+..|=..+.|.--+.+.++++++..|+.-+.+-=.+|..+..++..+..+.+
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~P 105 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAP 105 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecC
Confidence 4567788888888999999999999998887777777777777777665554
No 328
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=36.78 E-value=1e+02 Score=25.96 Aligned_cols=24 Identities=25% Similarity=0.511 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhh
Q 010212 74 NGVALCGTLAGQLFFGWLGDKMGR 97 (515)
Q Consensus 74 ~s~~~l~~~i~~~~~G~l~dr~Gr 97 (515)
+.-|.+++.+++.+.|++.||.-+
T Consensus 88 TgGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 88 TGGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhc
Confidence 456788999999999999999885
No 329
>COG4769 Predicted membrane protein [Function unknown]
Probab=35.07 E-value=40 Score=27.37 Aligned_cols=52 Identities=12% Similarity=0.078 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhh
Q 010212 76 VALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGF 139 (515)
Q Consensus 76 ~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 139 (515)
++.+..++.+...-++..++|+|..-.+|...+ -++.+| +.++++.+++.+-
T Consensus 81 l~sfaG~i~S~L~m~~l~~f~~k~~S~lgiS~m------GaF~hN------l~QLivas~Lv~~ 132 (181)
T COG4769 81 LYSFAGAILSTLFMYFLYQFGPKYLSLLGISVM------GAFTHN------LGQLIVASFLVFT 132 (181)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCceEeeeehhhH------HHHHHh------HHHHHHHHHHHhc
Confidence 345556677777788889999998755555433 356777 8999999998764
No 330
>PF15061 DUF4538: Domain of unknown function (DUF4538)
Probab=33.70 E-value=64 Score=21.01 Aligned_cols=21 Identities=24% Similarity=0.309 Sum_probs=15.4
Q ss_pred CchHHHHHHHHHHHHHHHHHH
Q 010212 466 GVKKALLILGGANFLGMLFTF 486 (515)
Q Consensus 466 g~~~~~~~~~~~~~~~~~~~~ 486 (515)
||+.+.++.+++.++++.++-
T Consensus 4 g~r~~~~~ggfVg~iG~a~Yp 24 (58)
T PF15061_consen 4 GWRYALFVGGFVGLIGAALYP 24 (58)
T ss_pred cccchhhHHHHHHHHHHHHhh
Confidence 677777777777777776665
No 331
>PF08611 DUF1774: Fungal protein of unknown function (DUF1774); InterPro: IPR013920 This is a fungal protein of unknown function.
Probab=33.44 E-value=2e+02 Score=21.23 Aligned_cols=22 Identities=14% Similarity=0.013 Sum_probs=14.2
Q ss_pred cCchHHHHHHHHHHHHHHHHHH
Q 010212 465 SGVKKALLILGGANFLGMLFTF 486 (515)
Q Consensus 465 ~g~~~~~~~~~~~~~~~~~~~~ 486 (515)
..|-.+|.+.+++.+.+.....
T Consensus 50 lQWIFAFvI~avlfv~sl~vav 71 (97)
T PF08611_consen 50 LQWIFAFVIAAVLFVLSLVVAV 71 (97)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 4466677777777766665544
No 332
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=33.05 E-value=1.4e+02 Score=19.45 Aligned_cols=30 Identities=10% Similarity=0.208 Sum_probs=20.6
Q ss_pred CCchHHHHHHHhHHHHHHHHHHHHhcCCch
Q 010212 211 ADYIWRIILMFGAIPALLTYYWRMKMPETA 240 (515)
Q Consensus 211 ~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p 240 (515)
..++++...+++.+.+++..++...+|+++
T Consensus 27 ~~~n~~~~~Ii~vi~~i~~~~~~~~i~~~~ 56 (57)
T PF11151_consen 27 VTYNFTTAAIIAVIFGIIVANIIAVIPKKS 56 (57)
T ss_pred CCCChHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 455688888888888877766665666543
No 333
>PRK02237 hypothetical protein; Provisional
Probab=32.99 E-value=1.1e+02 Score=22.89 Aligned_cols=51 Identities=14% Similarity=0.054 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhcC
Q 010212 69 VASAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVICSLASGLSF 119 (515)
Q Consensus 69 ~~g~~~s~~~l~~~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~ 119 (515)
..|=+.+.|.--+.+.++++++..|+.-+-+-=.+|..+..++..+..+.+
T Consensus 57 ~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 57 AFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred hhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence 467888888889999999999999998877776777777777776665554
No 334
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=32.07 E-value=44 Score=25.88 Aligned_cols=12 Identities=17% Similarity=0.379 Sum_probs=4.0
Q ss_pred HHHhccccCCCC
Q 010212 484 FTFLVPESKGKS 495 (515)
Q Consensus 484 ~~~~~~~~~~~~ 495 (515)
+.|++++.++|.
T Consensus 84 i~y~irR~~Kk~ 95 (122)
T PF01102_consen 84 ISYCIRRLRKKS 95 (122)
T ss_dssp HHHHHHHHS---
T ss_pred HHHHHHHHhccC
Confidence 344444444443
No 335
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=31.09 E-value=2.2e+02 Score=21.16 Aligned_cols=30 Identities=10% Similarity=-0.031 Sum_probs=15.2
Q ss_pred hHHHHHHHHHHhhchhhHHHHHHHHHHHHH
Q 010212 356 PGYWFTVALIDKIGRFAIQLMGFFFMTVFM 385 (515)
Q Consensus 356 ~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~ 385 (515)
+|.+++-|+-++++..+...+.+++.+++.
T Consensus 58 ~G~~lG~WLD~~~~t~~~~tl~~lllGv~~ 87 (100)
T TIGR02230 58 LGVAVGIWLDRHYPSPFSWTLTMLIVGVVI 87 (100)
T ss_pred HHHHHHHHHHhhcCCCcHHHHHHHHHHHHH
Confidence 344344555556776665554444444433
No 336
>PF15048 OSTbeta: Organic solute transporter subunit beta protein
Probab=30.77 E-value=67 Score=24.73 Aligned_cols=24 Identities=17% Similarity=0.184 Sum_probs=15.4
Q ss_pred hccCchHHHHHHHHHHHHHHHHHH
Q 010212 463 DTSGVKKALLILGGANFLGMLFTF 486 (515)
Q Consensus 463 ~~~g~~~~~~~~~~~~~~~~~~~~ 486 (515)
|...|.+..+.+++++++..++.+
T Consensus 31 D~tpWNysiL~Ls~vvlvi~~~LL 54 (125)
T PF15048_consen 31 DATPWNYSILALSFVVLVISFFLL 54 (125)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHH
Confidence 456788887777666655554444
No 337
>PRK11469 hypothetical protein; Provisional
Probab=29.67 E-value=3.5e+02 Score=22.96 Aligned_cols=32 Identities=19% Similarity=0.220 Sum_probs=21.5
Q ss_pred HHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHH
Q 010212 82 LAGQLFFGWLGDKMGRKRVYGMTLMMMVICSL 113 (515)
Q Consensus 82 ~i~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~ 113 (515)
..|..++.++.+++|||.-++-|.++..++.-
T Consensus 149 ~~G~~lG~~~g~~~g~~a~~lgG~iLI~iGi~ 180 (188)
T PRK11469 149 TLGMMVGRFIGSIIGKKAEILGGLVLIGIGVQ 180 (188)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444555666778888777777777776654
No 338
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=29.59 E-value=1.1e+02 Score=24.80 Aligned_cols=26 Identities=31% Similarity=0.492 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhh
Q 010212 74 NGVALCGTLAGQLFFGWLGDKMGRKR 99 (515)
Q Consensus 74 ~s~~~l~~~i~~~~~G~l~dr~Grr~ 99 (515)
+.-|.+|+.+.+.+.|++.+|..+++
T Consensus 59 TgGyl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 59 TGGYLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred CChHHHHHHHHHHHHHHHHHhccccc
Confidence 45678889999999999999988764
No 339
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=28.89 E-value=3.7e+02 Score=24.61 Aligned_cols=37 Identities=30% Similarity=0.277 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccc
Q 010212 101 YGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIG 142 (515)
Q Consensus 101 l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g 142 (515)
++.+++++++++++..+...+ .+.+.+.-++.+++.+
T Consensus 2 L~~~~~~~~~~s~~~~l~~~~-----~~l~~~~~~~~~F~~~ 38 (284)
T PF12805_consen 2 LIATLLCFALASLLVGLLFPY-----PWLLILVLALLTFFFG 38 (284)
T ss_pred HHHHHHHHHHHHHHHHHHhhc-----cHHHHHHHHHHHHHHH
Confidence 345566665666666665553 4555555555555443
No 340
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=28.72 E-value=37 Score=30.29 Aligned_cols=63 Identities=16% Similarity=0.201 Sum_probs=41.8
Q ss_pred HHHhHHHHHHhhhHHHHHHhhhhhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhh---------hhhhhh
Q 010212 28 AGMGFFTDAYDLFCISLVTKLLGRIYYYKEGSDSPGTLPDNVASAVNGVALCGTLAGQLFFGWLG---------DKMGRK 98 (515)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~G~l~---------dr~Grr 98 (515)
-..+.+.+....+.+-..+-...++. +.++.....++-+..+.-++..++.|... ||+|||
T Consensus 22 yGvGHmlNDitAScWFTYlllfltqi----------glsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~ 91 (412)
T KOG4830|consen 22 YGVGHMLNDITASCWFTYLLLFLTQI----------GLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRR 91 (412)
T ss_pred echhHHHhhHHHHHHHHHHHHHHHHh----------cCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhhcce
Confidence 33455555555555444444444555 77777777888888888888888887544 589998
Q ss_pred hH
Q 010212 99 RV 100 (515)
Q Consensus 99 ~~ 100 (515)
+.
T Consensus 92 ~~ 93 (412)
T KOG4830|consen 92 MS 93 (412)
T ss_pred ee
Confidence 76
No 341
>KOG4255 consensus Uncharacterized conserved protein [Function unknown]
Probab=28.64 E-value=5e+02 Score=24.44 Aligned_cols=60 Identities=12% Similarity=0.076 Sum_probs=34.2
Q ss_pred hHHHHHHHHHHHHHHHhhhcCCCC-----chhHHHHHHHHHHHhhhccccccchhhHhhhhccccc
Q 010212 99 RVYGMTLMMMVICSLASGLSFGKE-----PKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKK 159 (515)
Q Consensus 99 ~~l~~~~~~~~i~~~~~~~~~~~~-----~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~ 159 (515)
+++..-+.+..+++++.++-.+.. ..+ -+.++..-|...+...........++++.-|.-
T Consensus 80 Piif~ll~~a~v~~l~laflW~~ts~V~g~~h-S~afl~L~F~LAivdc~SnVtFLPFMs~lpp~f 144 (439)
T KOG4255|consen 80 PIIFVLLLLACVCQLGLAFLWHDTSPVFGALH-SWAFLSLLFGLAIVDCTSNVTFLPFMSQLPPAF 144 (439)
T ss_pred CchhHHHHHHHHHHHHHHHHHhcchhhhcCcc-hHHHHHHHHHHHHHHhhccchhhhhhhhCChHH
Confidence 344444444467777777654421 112 255666667677766666666667777755443
No 342
>KOG4112 consensus Signal peptidase subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=27.77 E-value=2.2e+02 Score=20.69 Aligned_cols=42 Identities=26% Similarity=0.409 Sum_probs=21.4
Q ss_pred HHHHHhhhhHHHHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHH
Q 010212 442 ISAASGKAGAIVGAFGFLYLADTSGVKKALLILGGANFLGMLFTF 486 (515)
Q Consensus 442 ~~~~~~~~g~~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 486 (515)
....+-.+++++| .+.|+.....++ ..++.++.+++..++.+
T Consensus 27 ~~q~ilti~aiVg-~i~Gf~~Qqls~--tvy~vg~~~v~t~li~L 68 (101)
T KOG4112|consen 27 FQQLILTIGAIVG-FIYGFAQQQLSV--TVYIVGAGFVFTLLITL 68 (101)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHH--HHHHHHHHHHHHHHhcC
Confidence 3444444455444 556666666554 34444444555555544
No 343
>COG1971 Predicted membrane protein [Function unknown]
Probab=27.58 E-value=3.8e+02 Score=22.72 Aligned_cols=40 Identities=23% Similarity=0.238 Sum_probs=22.2
Q ss_pred HHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHH
Q 010212 348 LIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFA 387 (515)
Q Consensus 348 ~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~ 387 (515)
....+...+|..++.++...+|+|.-+..+.++..++.-.
T Consensus 144 ~~T~il~~~G~~IG~~~g~~~g~~ae~lgGiiLI~~G~~i 183 (190)
T COG1971 144 LITLILSALGAIIGRKLGKFLGKYAEILGGIILIGIGVKI 183 (190)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 3344444555555555666666676666665555554433
No 344
>PRK12405 electron transport complex RsxE subunit; Provisional
Probab=27.26 E-value=4.4e+02 Score=23.28 Aligned_cols=12 Identities=33% Similarity=0.523 Sum_probs=5.7
Q ss_pred HHHHHHHHHHHH
Q 010212 475 GGANFLGMLFTF 486 (515)
Q Consensus 475 ~~~~~~~~~~~~ 486 (515)
+++.+++.++..
T Consensus 191 GaF~~lg~l~a~ 202 (231)
T PRK12405 191 GAFIGLGLLLAL 202 (231)
T ss_pred HHHHHHHHHHHH
Confidence 444455554443
No 345
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=27.21 E-value=2.8e+02 Score=20.96 Aligned_cols=44 Identities=16% Similarity=0.179 Sum_probs=26.0
Q ss_pred HHHHHHhhhhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHh
Q 010212 346 QTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAI 390 (515)
Q Consensus 346 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~ 390 (515)
......+..+++. ..-..+|.+.|+.......+...+++.++..
T Consensus 6 ~L~lAi~~EV~~~-~~lK~s~gf~~~~~~il~~v~~~~sf~~Ls~ 49 (106)
T COG2076 6 YLLLAILLEVVGT-TLLKYSDGFTRLWPSILTIVGYGLSFYLLSL 49 (106)
T ss_pred HHHHHHHHHHHHH-HHHHHHhcccccchHHHHHHHHHHHHHHHHH
Confidence 4455555666555 5567788777777666555555555444443
No 346
>PF00939 Na_sulph_symp: Sodium:sulfate symporter transmembrane region; InterPro: IPR001898 Integral membrane proteins that mediate the intake of a wide variety of molecules with the concomitant uptake of sodium ions (sodium symporters) can be grouped, on the basis of sequence and functional similarities into a number of distinct families. One of these families currently consists of the following proteins: Mammalian sodium/sulphate cotransporter []. Mammalian renal sodium/dicarboxylate cotransporter [], which transports succinate and citrate. Mammalian intestinal sodium/dicarboxylate cotransporter. Chlamydomonas reinhardtii putative sulphur deprivation response regulator SAC1 []. Caenorhabditis elegans hypothetical proteins B0285.6, F31F6.6, K08E5.2 and R107.1. Escherichia coli hypothetical protein yfbS. Haemophilus influenzae hypothetical protein HI0608. Synechocystis sp. (strain PCC 6803) hypothetical protein sll0640. Methanocaldococcus jannaschii (Methanococcus jannaschii) hypothetical protein MJ0672. These transporters are proteins of from 430 to 620 amino acids which are highly hydrophobic and which probably contain about 12 transmembrane regions.; GO: 0005215 transporter activity, 0006814 sodium ion transport, 0055085 transmembrane transport, 0016020 membrane
Probab=26.73 E-value=5.8e+02 Score=25.44 Aligned_cols=6 Identities=17% Similarity=0.584 Sum_probs=2.4
Q ss_pred hhhhhh
Q 010212 93 DKMGRK 98 (515)
Q Consensus 93 dr~Grr 98 (515)
.|+|++
T Consensus 113 ~~~g~~ 118 (471)
T PF00939_consen 113 KRFGGS 118 (471)
T ss_pred HHhCCc
Confidence 334443
No 347
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=26.59 E-value=2.3e+02 Score=22.56 Aligned_cols=25 Identities=8% Similarity=-0.019 Sum_probs=18.3
Q ss_pred hhhhccccccchhHHHHHHHHHHHH
Q 010212 151 IMSEYANKKTRGAFIAAVFAMQGFG 175 (515)
Q Consensus 151 ~i~e~~~~~~r~~~~~~~~~~~~~G 175 (515)
-+.|++|++.|....+.+.......
T Consensus 59 aLkdi~P~~~R~~i~~~~~~~~~~~ 83 (137)
T PF04281_consen 59 ALKDIFPPSVRNWISSTVSTTSSAV 83 (137)
T ss_pred HHhccCCHHHHHHHHHHHHHHHHHH
Confidence 3579999999998877766544433
No 348
>PF01914 MarC: MarC family integral membrane protein; InterPro: IPR002771 Members of this family are integral membrane proteins that includes the antibiotic resistance protein MarC. These proteins may be transporters. ; GO: 0016021 integral to membrane
Probab=26.56 E-value=4.2e+02 Score=22.83 Aligned_cols=64 Identities=13% Similarity=0.063 Sum_probs=27.5
Q ss_pred ccccccccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCch-HHHHHHHHHHHHHHHHH
Q 010212 421 TTTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSGVK-KALLILGGANFLGMLFT 485 (515)
Q Consensus 421 ~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~-~~~~~~~~~~~~~~~~~ 485 (515)
|.......+.- +++|-+..--......+...+.......+.+.+|.. .+|-+.|++.+....+-
T Consensus 22 p~f~~lt~~~~-~~~r~~ia~~a~~~a~~ill~f~~~G~~iL~~fgIsl~af~IaGGiiL~~ia~~ 86 (203)
T PF01914_consen 22 PIFLSLTKGMS-PKERRRIARRASIIAFIILLIFAFFGQLILNFFGISLPAFRIAGGIILFLIALE 86 (203)
T ss_pred HHHHHHhCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence 33334444443 344433332332222333333344444555555543 34556665555444333
No 349
>PF05545 FixQ: Cbb3-type cytochrome oxidase component FixQ; InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=26.38 E-value=1e+02 Score=19.18 Aligned_cols=14 Identities=21% Similarity=0.451 Sum_probs=5.6
Q ss_pred HHHHHHHHHHhccc
Q 010212 477 ANFLGMLFTFLVPE 490 (515)
Q Consensus 477 ~~~~~~~~~~~~~~ 490 (515)
++.++.+.+.+.|+
T Consensus 20 ~~F~gi~~w~~~~~ 33 (49)
T PF05545_consen 20 VFFIGIVIWAYRPR 33 (49)
T ss_pred HHHHHHHHHHHccc
Confidence 33334343335444
No 350
>PF04277 OAD_gamma: Oxaloacetate decarboxylase, gamma chain ; InterPro: IPR005899 This family comprises distantly related, low complexity, hydrophobic small subunits of several related sodium ion-pumping decarboxylases. These include oxaloacetate decarboxylase gamma subunit and methylmalonyl-CoA decarboxylase delta subunit [].; GO: 0008948 oxaloacetate decarboxylase activity, 0015081 sodium ion transmembrane transporter activity, 0071436 sodium ion export, 0016020 membrane
Probab=24.79 E-value=1.2e+02 Score=21.08 Aligned_cols=22 Identities=23% Similarity=0.169 Sum_probs=9.4
Q ss_pred CchHHHHHHHHHHHHHHHHHHh
Q 010212 466 GVKKALLILGGANFLGMLFTFL 487 (515)
Q Consensus 466 g~~~~~~~~~~~~~~~~~~~~~ 487 (515)
|....|.++.++.++..++..+
T Consensus 11 Gm~iVF~~L~lL~~~i~l~~~~ 32 (79)
T PF04277_consen 11 GMGIVFLVLILLILVISLMSKL 32 (79)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3344455444444443333333
No 351
>TIGR00267 conserved hypothetical protein TIGR00267. This family is represented in three of the first four completed archaeal genomes, with two members in A. fulgidus.
Probab=24.31 E-value=4.2e+02 Score=22.02 Aligned_cols=30 Identities=10% Similarity=0.103 Sum_probs=15.8
Q ss_pred hhHHHHHHHHHHhhchhhHHHHHHHHHHHH
Q 010212 355 VPGYWFTVALIDKIGRFAIQLMGFFFMTVF 384 (515)
Q Consensus 355 ~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~ 384 (515)
.+.-++.|++.-|+++++....+.-...++
T Consensus 127 ~~~L~ilG~~~a~~s~~~~~~s~lr~~~~G 156 (169)
T TIGR00267 127 LIALLVLGVYLGRISRENILISSLKMVVIG 156 (169)
T ss_pred HHHHHHHHHHHHHHcCCcHHHHHHHHHHHH
Confidence 334445677777776665554433333333
No 352
>COG4736 CcoQ Cbb3-type cytochrome oxidase, subunit 3 [Posttranslational modification, protein turnover, chaperones]
Probab=23.91 E-value=1.2e+02 Score=20.04 Aligned_cols=20 Identities=20% Similarity=0.385 Sum_probs=9.2
Q ss_pred HHHHHHHHHHHhccccCCCC
Q 010212 476 GANFLGMLFTFLVPESKGKS 495 (515)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~ 495 (515)
.+++++.+.+.+-|+.|++.
T Consensus 19 ~l~fiavi~~ayr~~~K~~~ 38 (60)
T COG4736 19 TLFFIAVIYFAYRPGKKGEF 38 (60)
T ss_pred HHHHHHHHHHHhcccchhhH
Confidence 34444444444555554443
No 353
>PRK10697 DNA-binding transcriptional activator PspC; Provisional
Probab=23.90 E-value=3e+02 Score=21.28 Aligned_cols=28 Identities=14% Similarity=0.214 Sum_probs=14.6
Q ss_pred HHHHHHHhHHH-----HHHH-HHHHHhcCCchhh
Q 010212 215 WRIILMFGAIP-----ALLT-YYWRMKMPETARY 242 (515)
Q Consensus 215 wr~~f~~~~~~-----~~~~-~~~~~~~~e~p~~ 242 (515)
-|..+++..++ .+++ +++++.+|+.|..
T Consensus 36 VRl~~vl~~~~~~~~~~~~~Yi~l~~~lp~~P~~ 69 (118)
T PRK10697 36 VRIIVVLSIFFGLFVFTLVAYIILSFALDPMPDN 69 (118)
T ss_pred HHHHHHHHHHHhhchHHHHHHHHHHHhccCCccc
Confidence 56665544332 2333 3455677877654
No 354
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=23.02 E-value=2.1e+02 Score=20.64 Aligned_cols=41 Identities=7% Similarity=0.051 Sum_probs=29.4
Q ss_pred HHHHHHHHHhhhhhhhhh-------hhHHHHHHHHHHHHHHHhhhcCC
Q 010212 80 GTLAGQLFFGWLGDKMGR-------KRVYGMTLMMMVICSLASGLSFG 120 (515)
Q Consensus 80 ~~~i~~~~~G~l~dr~Gr-------r~~l~~~~~~~~i~~~~~~~~~~ 120 (515)
+.....+.++++.+|.-+ ++.+.++.++...+.++++...+
T Consensus 30 ~~ta~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqrS 77 (86)
T PF10785_consen 30 GATAASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQRS 77 (86)
T ss_pred HHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHHh
Confidence 445566667777776554 67788888888888888887655
No 355
>PF04024 PspC: PspC domain; InterPro: IPR007168 This domain is found in Phage shock protein C (PspC) that is thought to be a transcriptional regulator. The presumed domain is 60 amino acid residues in length.
Probab=22.57 E-value=2.3e+02 Score=18.74 Aligned_cols=29 Identities=14% Similarity=0.252 Sum_probs=16.8
Q ss_pred CchHHHHHHHhHHHH---HHH-HHHHHhcCCch
Q 010212 212 DYIWRIILMFGAIPA---LLT-YYWRMKMPETA 240 (515)
Q Consensus 212 ~~~wr~~f~~~~~~~---~~~-~~~~~~~~e~p 240 (515)
..-+|..|.+..+.. ++. +++++.+|+.|
T Consensus 28 ~~~vRl~~v~l~~~~~~~~l~Y~~~w~~lP~~~ 60 (61)
T PF04024_consen 28 PTLVRLIFVVLTFFTGGGILLYLILWLLLPKEP 60 (61)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCC
Confidence 344788888755543 222 33456678765
No 356
>TIGR02840 spore_YtaF putative sporulation protein YtaF. This protein family was identified, at the time of the publication of the Carboxydothermus hydrogenoformans genome, as having a phylogenetic profile that exactly matches the subset of the Firmicutes capable of forming endospores. The species include Bacillus anthracis, Clostridium tetani, Thermoanaerobacter tengcongensis, Geobacillus kaustophilus, etc. This protein, previously named YtaF, is therefore a putative sporulation protein.
Probab=21.28 E-value=5.4e+02 Score=22.22 Aligned_cols=17 Identities=12% Similarity=0.169 Sum_probs=6.8
Q ss_pred HhhhhhHHHHHHHHHHh
Q 010212 351 LCSTVPGYWFTVALIDK 367 (515)
Q Consensus 351 ~~~~~~~~~~~g~l~d~ 367 (515)
.+....|..++.++.++
T Consensus 168 ~i~~~~G~~lG~~~~~~ 184 (206)
T TIGR02840 168 FIFVSLGLFLGKKISKK 184 (206)
T ss_pred HHHHHHHHHHHHHHhhh
Confidence 33333344344444444
No 357
>PF13493 DUF4118: Domain of unknown function (DUF4118); PDB: 2KSF_A.
Probab=21.26 E-value=3.2e+02 Score=20.13 Aligned_cols=25 Identities=24% Similarity=0.388 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhh
Q 010212 74 NGVALCGTLAGQLFFGWLGDKMGRK 98 (515)
Q Consensus 74 ~s~~~l~~~i~~~~~G~l~dr~Grr 98 (515)
.-.....+.+.+++.|.+.||..||
T Consensus 81 ~~~~~~~~l~va~v~g~l~~~~r~~ 105 (105)
T PF13493_consen 81 DWITFAVFLVVALVTGYLADRYRRQ 105 (105)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 3445566777888999999998776
No 358
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=21.10 E-value=1.7e+02 Score=23.23 Aligned_cols=51 Identities=18% Similarity=0.220 Sum_probs=30.0
Q ss_pred ccccCchhhhhhhhHHHHHHhhhhHHHHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHH
Q 010212 427 PAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYLADTSGVKKALLILGGANFLGMLFTF 486 (515)
Q Consensus 427 ~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 486 (515)
+.|++|+..|....+..+........... ++-+.+|++..-..++++-+.+
T Consensus 60 Lkdi~P~~~R~~i~~~~~~~~~~~k~~~~---------~~g~a~Wi~tTSallLgvPl~l 110 (137)
T PF04281_consen 60 LKDIFPPSVRNWISSTVSTTSSAVKSLFS---------FSGKALWIVTTSALLLGVPLAL 110 (137)
T ss_pred HhccCCHHHHHHHHHHHHHHHHHHHHHHH---------hcchhHHHHHHHHHHHHHHHHH
Confidence 36899999999888777765544332221 2223445555555555555554
No 359
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=20.47 E-value=3.8e+02 Score=20.21 Aligned_cols=66 Identities=15% Similarity=0.141 Sum_probs=44.1
Q ss_pred HHHhhhhhhhhhhhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHhhhccccccchhhHhhhhcc
Q 010212 86 LFFGWLGDKMGRKRVYGMTLMMMVICSLASGLSFGKEPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYA 156 (515)
Q Consensus 86 ~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~ 156 (515)
-..-..+|.+.|+...+...+..+++..+.+.+-.+ .+.=.+--...|+|..+.......+..|-.
T Consensus 18 ~~~lK~s~gf~~~~~~il~~v~~~~sf~~Ls~alk~-----ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l 83 (106)
T COG2076 18 TTLLKYSDGFTRLWPSILTIVGYGLSFYLLSLALKT-----IPLGVAYAIWTGIGIVGTALVGVLLFGESL 83 (106)
T ss_pred HHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhh-----CchHHHHHHHHHHHHHHHHHHHHHhcCCcC
Confidence 344567888889888888888888888888877654 444455555677776655444444444443
No 360
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=20.31 E-value=1e+02 Score=26.85 Aligned_cols=55 Identities=13% Similarity=0.144 Sum_probs=39.3
Q ss_pred HHHHHhhhccccccchhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 010212 132 FFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGMVAIIVS 187 (515)
Q Consensus 132 ~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~ 187 (515)
..-.-.|+|.|.+...+..-+.+.+|+ ......++.....-+....|-.+.-++.
T Consensus 176 ALAMasGvGSgSMMaAa~~aL~~~~P~-~a~~i~A~AaaSNllt~~~G~Y~~ifia 230 (241)
T PF11299_consen 176 ALAMASGVGSGSMMAAASGALAAAYPE-MADQILAFAAASNLLTSVTGLYMSIFIA 230 (241)
T ss_pred HHHHHcCCcHHHHHHHHHHHHHHHCcc-hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344557899999899999999999974 4566777776666666666665555554
No 361
>PTZ00370 STEVOR; Provisional
Probab=20.11 E-value=1.5e+02 Score=26.86 Aligned_cols=31 Identities=13% Similarity=0.024 Sum_probs=16.4
Q ss_pred CchHHHHHHHHHHHHHHHHHHhccccCCCCh
Q 010212 466 GVKKALLILGGANFLGMLFTFLVPESKGKSL 496 (515)
Q Consensus 466 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 496 (515)
.|..+-+++.++.++.++++.++.++|++++
T Consensus 256 Pygiaalvllil~vvliilYiwlyrrRK~sw 286 (296)
T PTZ00370 256 PYGIAALVLLILAVVLIILYIWLYRRRKNSW 286 (296)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhhcchh
Confidence 3444555554555555555556655555544
No 362
>TIGR01478 STEVOR variant surface antigen, stevor family. This model represents the stevor branch of the rifin/stevor family (pfam02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of stevor sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 8 bits.
Probab=20.10 E-value=1.4e+02 Score=26.86 Aligned_cols=31 Identities=16% Similarity=0.057 Sum_probs=16.2
Q ss_pred CchHHHHHHHHHHHHHHHHHHhccccCCCCh
Q 010212 466 GVKKALLILGGANFLGMLFTFLVPESKGKSL 496 (515)
Q Consensus 466 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 496 (515)
.|..+-+++.++.++.++++.++.++|++++
T Consensus 260 Pcgiaalvllil~vvliiLYiWlyrrRK~sw 290 (295)
T TIGR01478 260 PYGIAALVLIILTVVLIILYIWLYRRRKKSW 290 (295)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 3444555554555555555556655555544
Done!