Query 010217
Match_columns 515
No_of_seqs 494 out of 3473
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 22:26:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010217.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010217hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g6h_A Rotenone-insensitive NA 100.0 2.3E-54 7.7E-59 452.3 33.2 322 55-376 39-375 (502)
2 4eqs_A Coenzyme A disulfide re 100.0 3.8E-41 1.3E-45 347.2 26.6 275 59-379 1-282 (437)
3 3hyw_A Sulfide-quinone reducta 100.0 1.8E-41 6E-46 349.5 20.2 287 58-379 2-300 (430)
4 3klj_A NAD(FAD)-dependent dehy 100.0 9.5E-41 3.2E-45 338.2 21.5 262 56-378 7-270 (385)
5 1xhc_A NADH oxidase /nitrite r 100.0 4.2E-39 1.4E-43 324.5 27.9 280 58-393 8-291 (367)
6 3ef6_A Toluene 1,2-dioxygenase 100.0 9.1E-39 3.1E-43 327.3 26.7 273 58-379 2-281 (410)
7 3lxd_A FAD-dependent pyridine 100.0 6.8E-38 2.3E-42 321.6 30.8 275 57-379 8-291 (415)
8 3fg2_P Putative rubredoxin red 100.0 7.4E-38 2.5E-42 320.1 30.1 273 58-379 1-281 (404)
9 2cdu_A NADPH oxidase; flavoenz 100.0 5.4E-37 1.8E-41 318.4 30.1 276 59-378 1-287 (452)
10 2gqw_A Ferredoxin reductase; f 100.0 1.1E-37 3.7E-42 319.0 24.3 268 57-379 6-279 (408)
11 3ntd_A FAD-dependent pyridine 100.0 9.4E-37 3.2E-41 325.7 31.9 277 59-377 2-307 (565)
12 1q1r_A Putidaredoxin reductase 100.0 3E-37 1E-41 317.9 26.6 275 57-379 3-290 (431)
13 3oc4_A Oxidoreductase, pyridin 100.0 3.6E-37 1.2E-41 319.6 26.0 289 59-394 3-309 (452)
14 3ics_A Coenzyme A-disulfide re 100.0 1.8E-36 6.1E-41 324.7 31.3 282 54-377 32-322 (588)
15 2bc0_A NADH oxidase; flavoprot 100.0 6.3E-37 2.1E-41 320.8 26.9 277 57-378 34-331 (490)
16 1nhp_A NADH peroxidase; oxidor 100.0 3.7E-36 1.3E-40 311.7 28.7 278 59-378 1-286 (447)
17 3iwa_A FAD-dependent pyridine 100.0 1.2E-36 4E-41 317.6 24.9 279 58-377 3-298 (472)
18 3sx6_A Sulfide-quinone reducta 100.0 2.1E-36 7.3E-41 312.4 26.3 285 58-378 4-310 (437)
19 3cgb_A Pyridine nucleotide-dis 100.0 5.1E-36 1.8E-40 313.1 29.1 279 58-378 36-323 (480)
20 3kd9_A Coenzyme A disulfide re 100.0 1.4E-36 4.6E-41 315.1 24.2 273 58-377 3-284 (449)
21 2v3a_A Rubredoxin reductase; a 100.0 1.9E-35 6.4E-40 300.3 28.5 269 58-377 4-281 (384)
22 3vrd_B FCCB subunit, flavocyto 100.0 7.3E-36 2.5E-40 305.3 23.8 277 58-376 2-297 (401)
23 3h8l_A NADH oxidase; membrane 100.0 3.1E-35 1.1E-39 301.3 26.5 283 59-381 2-315 (409)
24 4gcm_A TRXR, thioredoxin reduc 100.0 2.7E-35 9.3E-40 290.6 24.0 283 56-393 4-298 (312)
25 3f8d_A Thioredoxin reductase ( 100.0 2.6E-34 8.9E-39 284.4 26.4 280 57-393 14-309 (323)
26 3h28_A Sulfide-quinone reducta 100.0 1.2E-34 4E-39 298.9 24.1 281 58-378 2-299 (430)
27 4a5l_A Thioredoxin reductase; 100.0 6.2E-35 2.1E-39 288.1 20.2 285 57-393 3-304 (314)
28 2qae_A Lipoamide, dihydrolipoy 100.0 8.3E-35 2.8E-39 303.3 21.0 272 58-378 2-320 (468)
29 3l8k_A Dihydrolipoyl dehydroge 100.0 4E-35 1.4E-39 305.3 17.9 269 58-378 4-313 (466)
30 1zmd_A Dihydrolipoyl dehydroge 100.0 1.5E-34 5E-39 301.9 20.0 272 57-379 5-326 (474)
31 3qfa_A Thioredoxin reductase 1 100.0 2.6E-34 9E-39 302.6 21.9 284 56-390 30-371 (519)
32 3urh_A Dihydrolipoyl dehydroge 100.0 3.4E-34 1.2E-38 300.3 22.3 284 57-390 24-354 (491)
33 2q7v_A Thioredoxin reductase; 100.0 9.8E-34 3.3E-38 281.1 24.4 281 57-393 7-304 (325)
34 2a8x_A Dihydrolipoyl dehydroge 100.0 1.9E-34 6.3E-39 300.3 19.5 271 58-379 3-315 (464)
35 1ebd_A E3BD, dihydrolipoamide 100.0 1.6E-34 5.6E-39 299.9 18.9 270 58-379 3-314 (455)
36 2wpf_A Trypanothione reductase 100.0 1.4E-34 4.8E-39 302.9 18.3 271 58-378 7-335 (495)
37 1ges_A Glutathione reductase; 100.0 1.6E-34 5.4E-39 299.3 18.4 261 58-378 4-308 (450)
38 1m6i_A Programmed cell death p 100.0 6.5E-34 2.2E-38 297.7 23.2 277 56-378 9-323 (493)
39 1mo9_A ORF3; nucleotide bindin 100.0 6.7E-34 2.3E-38 299.9 23.4 269 57-379 42-359 (523)
40 2zbw_A Thioredoxin reductase; 100.0 1.1E-33 3.8E-38 281.8 23.6 280 57-390 4-306 (335)
41 3itj_A Thioredoxin reductase 1 100.0 3.1E-34 1.1E-38 285.9 19.4 291 54-394 18-328 (338)
42 3dgz_A Thioredoxin reductase 2 100.0 2E-34 6.8E-39 301.8 18.7 283 57-390 5-343 (488)
43 3r9u_A Thioredoxin reductase; 100.0 6.3E-34 2.2E-38 280.7 21.2 279 57-393 3-304 (315)
44 1fec_A Trypanothione reductase 100.0 2.4E-34 8.3E-39 300.9 18.9 273 58-378 3-331 (490)
45 1fl2_A Alkyl hydroperoxide red 100.0 1.6E-33 5.5E-38 277.5 23.4 278 59-393 2-297 (310)
46 4b1b_A TRXR, thioredoxin reduc 100.0 7.8E-34 2.7E-38 297.7 21.9 268 58-377 42-362 (542)
47 2eq6_A Pyruvate dehydrogenase 100.0 5.6E-34 1.9E-38 296.4 20.7 266 58-379 6-315 (464)
48 2q0l_A TRXR, thioredoxin reduc 100.0 1.2E-33 4E-38 278.7 21.9 277 59-393 2-301 (311)
49 2hqm_A GR, grase, glutathione 100.0 2.8E-34 9.5E-39 299.9 18.2 267 57-378 10-327 (479)
50 1zk7_A HGII, reductase, mercur 100.0 1.3E-33 4.6E-38 294.1 23.3 278 57-390 3-325 (467)
51 1dxl_A Dihydrolipoamide dehydr 100.0 1.6E-34 5.6E-39 301.3 16.2 273 57-379 5-323 (470)
52 2r9z_A Glutathione amide reduc 100.0 1.3E-33 4.4E-38 293.5 21.4 262 58-378 4-307 (463)
53 1onf_A GR, grase, glutathione 100.0 4.4E-34 1.5E-38 299.8 17.9 270 58-376 2-315 (500)
54 3cty_A Thioredoxin reductase; 100.0 2.1E-33 7.1E-38 278.0 21.7 281 57-393 15-308 (319)
55 3dk9_A Grase, GR, glutathione 100.0 6.3E-34 2.2E-38 297.4 18.6 268 57-379 19-337 (478)
56 1ojt_A Surface protein; redox- 100.0 6.7E-34 2.3E-38 297.3 18.4 274 58-379 6-330 (482)
57 3fbs_A Oxidoreductase; structu 100.0 1.3E-33 4.5E-38 276.0 19.0 274 58-393 2-284 (297)
58 1trb_A Thioredoxin reductase; 100.0 1.9E-33 6.5E-38 278.2 19.9 281 58-393 5-306 (320)
59 1xdi_A RV3303C-LPDA; reductase 100.0 1E-33 3.6E-38 297.2 17.9 269 58-379 2-323 (499)
60 3dgh_A TRXR-1, thioredoxin red 100.0 2E-33 6.9E-38 293.9 19.7 282 56-390 7-343 (483)
61 3lzw_A Ferredoxin--NADP reduct 100.0 2.7E-33 9.2E-38 278.3 19.4 278 58-392 7-306 (332)
62 1v59_A Dihydrolipoamide dehydr 100.0 4.3E-33 1.5E-37 291.2 19.5 273 58-379 5-331 (478)
63 3ab1_A Ferredoxin--NADP reduct 100.0 7.2E-33 2.5E-37 278.9 20.4 279 58-391 14-318 (360)
64 4dna_A Probable glutathione re 100.0 3.6E-33 1.2E-37 290.5 18.1 264 58-379 5-312 (463)
65 1lvl_A Dihydrolipoamide dehydr 100.0 3.4E-33 1.2E-37 290.0 17.7 263 58-379 5-311 (458)
66 4fk1_A Putative thioredoxin re 100.0 9.4E-33 3.2E-37 271.4 19.7 277 58-394 6-293 (304)
67 2x8g_A Thioredoxin glutathione 100.0 7.4E-33 2.5E-37 297.1 18.9 284 56-390 105-450 (598)
68 1hyu_A AHPF, alkyl hydroperoxi 100.0 4.2E-32 1.5E-36 285.8 24.0 277 57-393 211-508 (521)
69 3lad_A Dihydrolipoamide dehydr 100.0 1.5E-32 5.3E-37 286.8 20.5 272 57-379 2-324 (476)
70 2a87_A TRXR, TR, thioredoxin r 100.0 1.9E-32 6.5E-37 273.0 20.1 281 56-393 12-308 (335)
71 1vdc_A NTR, NADPH dependent th 100.0 1.8E-32 6.3E-37 272.7 19.9 286 58-393 8-315 (333)
72 3ic9_A Dihydrolipoamide dehydr 100.0 1.1E-32 3.8E-37 288.4 18.6 266 58-379 8-319 (492)
73 2yqu_A 2-oxoglutarate dehydrog 100.0 3.5E-33 1.2E-37 290.0 14.2 265 59-379 2-308 (455)
74 3o0h_A Glutathione reductase; 100.0 1.9E-32 6.4E-37 286.5 19.8 262 58-378 26-331 (484)
75 2vdc_G Glutamate synthase [NAD 100.0 2.8E-32 9.5E-37 281.5 16.0 290 56-394 120-437 (456)
76 3d1c_A Flavin-containing putat 100.0 1.6E-30 5.4E-35 262.5 21.5 268 58-380 4-315 (369)
77 4a9w_A Monooxygenase; baeyer-v 100.0 3.7E-31 1.3E-35 265.4 14.3 279 58-393 3-344 (357)
78 1lqt_A FPRA; NADP+ derivative, 100.0 9.4E-31 3.2E-35 270.5 14.4 300 58-393 3-379 (456)
79 1o94_A Tmadh, trimethylamine d 100.0 1E-30 3.5E-35 285.5 14.7 317 16-395 342-694 (729)
80 1cjc_A Protein (adrenodoxin re 100.0 5.6E-31 1.9E-35 272.4 10.6 302 57-393 5-387 (460)
81 3k30_A Histamine dehydrogenase 100.0 3.1E-30 1.1E-34 280.5 14.1 307 17-395 346-669 (690)
82 3s5w_A L-ornithine 5-monooxyge 100.0 2.9E-29 9.9E-34 261.2 20.4 282 57-376 29-420 (463)
83 2xve_A Flavin-containing monoo 100.0 6.2E-29 2.1E-33 258.0 21.7 256 58-379 2-321 (464)
84 1gte_A Dihydropyrimidine dehyd 100.0 3.9E-29 1.3E-33 282.0 19.6 282 57-391 186-498 (1025)
85 1ps9_A 2,4-dienoyl-COA reducta 100.0 6.3E-29 2.2E-33 269.6 18.6 290 38-393 353-668 (671)
86 2gag_A Heterotetrameric sarcos 100.0 4.4E-29 1.5E-33 279.7 17.4 284 58-393 128-436 (965)
87 2gv8_A Monooxygenase; FMO, FAD 99.9 1E-26 3.4E-31 240.8 20.4 256 57-378 5-341 (447)
88 3gwf_A Cyclohexanone monooxyge 99.9 4.7E-27 1.6E-31 247.5 13.0 265 57-376 7-433 (540)
89 1y56_A Hypothetical protein PH 99.9 4.9E-27 1.7E-31 245.6 11.7 253 58-393 108-369 (493)
90 4ap3_A Steroid monooxygenase; 99.9 1.1E-25 3.8E-30 237.6 11.3 170 56-272 19-226 (549)
91 3uox_A Otemo; baeyer-villiger 99.9 1E-25 3.5E-30 237.6 7.8 178 57-272 8-220 (545)
92 1w4x_A Phenylacetone monooxyge 99.9 1.7E-23 5.9E-28 221.4 16.7 174 57-272 15-221 (542)
93 4b63_A L-ornithine N5 monooxyg 99.8 4.1E-19 1.4E-23 185.7 24.0 282 56-374 37-457 (501)
94 2ywl_A Thioredoxin reductase r 99.8 5E-18 1.7E-22 152.8 15.6 143 225-393 3-163 (180)
95 2e5v_A L-aspartate oxidase; ar 99.6 3.2E-17 1.1E-21 170.1 -2.9 257 60-376 1-340 (472)
96 3fpz_A Thiazole biosynthetic e 99.5 1.4E-16 4.7E-21 157.6 -7.5 227 58-376 65-294 (326)
97 2gqf_A Hypothetical protein HI 99.4 8.6E-14 2.9E-18 141.1 4.4 109 58-176 4-169 (401)
98 2cul_A Glucose-inhibited divis 99.3 2.2E-11 7.4E-16 113.9 15.0 92 225-333 5-123 (232)
99 3k7m_X 6-hydroxy-L-nicotine ox 99.2 1E-10 3.4E-15 119.9 12.5 93 279-376 205-307 (431)
100 3ces_A MNMG, tRNA uridine 5-ca 99.0 2.5E-10 8.6E-15 120.4 7.9 117 58-184 28-190 (651)
101 2ywl_A Thioredoxin reductase r 99.0 3.9E-10 1.3E-14 100.8 7.6 107 59-177 2-112 (180)
102 2cul_A Glucose-inhibited divis 98.9 1.3E-09 4.3E-14 101.9 7.3 116 58-183 3-133 (232)
103 1rp0_A ARA6, thiazole biosynth 98.9 7.5E-09 2.6E-13 99.7 12.1 137 224-376 40-244 (284)
104 2zxi_A TRNA uridine 5-carboxym 98.9 1.7E-09 6E-14 113.6 7.3 115 58-184 27-189 (637)
105 3v76_A Flavoprotein; structura 98.9 1.9E-09 6.6E-14 109.5 7.0 110 56-175 25-187 (417)
106 1rp0_A ARA6, thiazole biosynth 98.9 7.5E-09 2.6E-13 99.7 10.6 119 58-177 39-193 (284)
107 3alj_A 2-methyl-3-hydroxypyrid 98.8 5.2E-09 1.8E-13 105.2 8.4 107 58-176 11-161 (379)
108 2bry_A NEDD9 interacting prote 98.8 4.7E-09 1.6E-13 109.3 7.8 121 56-182 90-237 (497)
109 3cp8_A TRNA uridine 5-carboxym 98.8 2.3E-09 7.8E-14 113.1 5.3 117 56-182 19-181 (641)
110 4dgk_A Phytoene dehydrogenase; 98.8 9.8E-09 3.4E-13 107.2 9.1 53 278-332 221-275 (501)
111 3dme_A Conserved exported prot 98.8 1.7E-07 5.9E-12 93.2 17.8 67 277-348 149-219 (369)
112 3nlc_A Uncharacterized protein 98.8 1.1E-08 3.6E-13 107.1 8.5 111 55-176 104-278 (549)
113 3nrn_A Uncharacterized protein 98.7 8.6E-09 2.9E-13 105.1 6.3 51 277-332 188-240 (421)
114 3pl8_A Pyranose 2-oxidase; sub 98.7 3.1E-09 1.1E-13 113.5 2.2 39 57-95 45-83 (623)
115 2bry_A NEDD9 interacting prote 98.7 3.2E-09 1.1E-13 110.6 2.0 151 163-333 37-228 (497)
116 3ka7_A Oxidoreductase; structu 98.7 4.9E-08 1.7E-12 99.5 10.7 52 278-332 196-249 (425)
117 2i0z_A NAD(FAD)-utilizing dehy 98.7 1.7E-08 5.8E-13 103.8 6.9 111 56-175 24-191 (447)
118 2gag_B Heterotetrameric sarcos 98.6 7.8E-07 2.7E-11 89.8 17.9 53 278-333 174-228 (405)
119 3nix_A Flavoprotein/dehydrogen 98.6 5.2E-08 1.8E-12 99.2 8.9 111 58-175 5-166 (421)
120 1ryi_A Glycine oxidase; flavop 98.6 2.1E-08 7.2E-13 100.7 5.2 38 55-92 14-51 (382)
121 2x3n_A Probable FAD-dependent 98.6 3.6E-08 1.2E-12 99.8 6.4 36 58-93 6-41 (399)
122 3atr_A Conserved archaeal prot 98.6 7.4E-08 2.5E-12 99.2 8.7 114 58-177 6-164 (453)
123 1y0p_A Fumarate reductase flav 98.6 9.7E-08 3.3E-12 101.3 9.7 38 58-95 126-163 (571)
124 3oz2_A Digeranylgeranylglycero 98.6 4.5E-08 1.5E-12 98.4 6.7 37 58-94 4-40 (397)
125 3ihg_A RDME; flavoenzyme, anth 98.6 1.1E-07 3.6E-12 100.2 9.5 37 57-93 4-40 (535)
126 3qj4_A Renalase; FAD/NAD(P)-bi 98.6 7.6E-08 2.6E-12 95.2 7.9 37 59-95 2-41 (342)
127 3rp8_A Flavoprotein monooxygen 98.6 8.2E-08 2.8E-12 97.3 8.3 39 55-93 20-58 (407)
128 1yvv_A Amine oxidase, flavin-c 98.6 7.3E-08 2.5E-12 94.8 7.7 37 58-94 2-38 (336)
129 3nyc_A D-arginine dehydrogenas 98.6 4.4E-08 1.5E-12 98.1 5.7 37 56-93 7-43 (381)
130 3ps9_A TRNA 5-methylaminomethy 98.6 1.6E-07 5.5E-12 101.6 10.2 37 57-93 271-307 (676)
131 1y56_B Sarcosine oxidase; dehy 98.5 1.2E-07 4.1E-12 95.2 8.5 35 57-91 4-38 (382)
132 3e1t_A Halogenase; flavoprotei 98.5 1.4E-07 4.8E-12 98.7 9.2 113 57-176 6-173 (512)
133 3fmw_A Oxygenase; mithramycin, 98.5 8.1E-08 2.8E-12 101.5 6.8 114 56-175 47-207 (570)
134 3cgv_A Geranylgeranyl reductas 98.5 7.5E-08 2.6E-12 97.1 6.3 112 58-175 4-162 (397)
135 1qo8_A Flavocytochrome C3 fuma 98.5 1.4E-07 4.8E-12 99.9 8.6 39 57-95 120-158 (566)
136 2qa1_A PGAE, polyketide oxygen 98.5 2.8E-07 9.6E-12 96.0 9.5 115 55-175 8-165 (500)
137 2uzz_A N-methyl-L-tryptophan o 98.5 7.9E-08 2.7E-12 96.1 4.8 35 58-92 2-36 (372)
138 3i3l_A Alkylhalidase CMLS; fla 98.5 2E-07 7E-12 98.7 8.0 35 58-92 23-57 (591)
139 2xdo_A TETX2 protein; tetracyc 98.5 2.5E-07 8.5E-12 93.5 8.4 37 57-93 25-61 (398)
140 2yqu_A 2-oxoglutarate dehydrog 98.5 2.4E-07 8.1E-12 95.5 8.1 103 57-179 166-268 (455)
141 2oln_A NIKD protein; flavoprot 98.5 1.7E-07 5.7E-12 94.7 6.8 35 58-92 4-38 (397)
142 3kkj_A Amine oxidase, flavin-c 98.5 7.5E-08 2.6E-12 91.2 4.0 41 57-97 1-41 (336)
143 2eq6_A Pyruvate dehydrogenase 98.5 3.8E-07 1.3E-11 94.1 9.5 108 57-179 168-275 (464)
144 1k0i_A P-hydroxybenzoate hydro 98.4 1.6E-07 5.5E-12 94.7 6.3 35 58-92 2-36 (394)
145 2gf3_A MSOX, monomeric sarcosi 98.4 1.5E-07 5.1E-12 94.6 5.9 36 58-93 3-38 (389)
146 2qa2_A CABE, polyketide oxygen 98.4 3.4E-07 1.2E-11 95.3 8.5 114 56-175 10-166 (499)
147 2vou_A 2,6-dihydroxypyridine h 98.4 4.5E-07 1.5E-11 91.5 8.9 36 57-92 4-39 (397)
148 3dje_A Fructosyl amine: oxygen 98.4 3.9E-07 1.3E-11 93.2 8.5 37 57-93 5-42 (438)
149 1nhp_A NADH peroxidase; oxidor 98.4 4.6E-07 1.6E-11 93.1 8.4 102 57-180 148-251 (447)
150 1d4d_A Flavocytochrome C fumar 98.4 8.9E-07 3E-11 93.8 10.8 39 57-95 125-163 (572)
151 3pvc_A TRNA 5-methylaminomethy 98.4 4E-07 1.4E-11 98.7 8.3 37 57-93 263-299 (689)
152 4at0_A 3-ketosteroid-delta4-5a 98.4 5E-07 1.7E-11 94.4 8.7 39 57-95 40-78 (510)
153 2gqw_A Ferredoxin reductase; f 98.4 6.4E-07 2.2E-11 90.8 9.1 98 57-177 144-241 (408)
154 2v3a_A Rubredoxin reductase; a 98.4 5.7E-07 1.9E-11 90.4 8.6 101 58-177 145-245 (384)
155 3da1_A Glycerol-3-phosphate de 98.4 7.7E-07 2.6E-11 93.9 9.6 36 57-92 17-52 (561)
156 2gmh_A Electron transfer flavo 98.4 3.5E-07 1.2E-11 97.0 7.0 39 56-94 33-77 (584)
157 1ebd_A E3BD, dihydrolipoamide 98.4 7.2E-07 2.5E-11 91.8 9.1 106 57-179 169-274 (455)
158 1lvl_A Dihydrolipoamide dehydr 98.4 4.1E-07 1.4E-11 93.7 6.8 103 57-179 170-272 (458)
159 3c4n_A Uncharacterized protein 98.4 1.6E-07 5.6E-12 95.1 3.8 36 57-92 35-72 (405)
160 2qcu_A Aerobic glycerol-3-phos 98.3 7.6E-07 2.6E-11 92.8 8.3 34 58-91 3-36 (501)
161 3c96_A Flavin-containing monoo 98.3 1.3E-06 4.5E-11 88.5 9.0 36 58-93 4-40 (410)
162 3jsk_A Cypbp37 protein; octame 98.3 1.2E-06 4E-11 85.6 7.9 37 58-94 79-117 (344)
163 3lxd_A FAD-dependent pyridine 98.3 1.6E-06 5.3E-11 88.1 9.3 99 58-177 152-253 (415)
164 3ef6_A Toluene 1,2-dioxygenase 98.3 8.9E-07 3E-11 89.8 7.2 100 57-177 142-243 (410)
165 4eqs_A Coenzyme A disulfide re 98.3 1.7E-06 5.9E-11 88.4 9.2 97 58-178 147-243 (437)
166 4a9w_A Monooxygenase; baeyer-v 98.3 3.1E-06 1E-10 83.6 10.8 97 224-337 4-134 (357)
167 1ges_A Glutathione reductase; 98.3 1.2E-06 4.3E-11 89.9 8.1 100 57-178 166-268 (450)
168 1v59_A Dihydrolipoamide dehydr 98.3 2.2E-06 7.5E-11 88.8 9.7 104 58-178 183-290 (478)
169 1trb_A Thioredoxin reductase; 98.2 3E-06 1E-10 82.6 9.8 103 57-178 144-250 (320)
170 2dkh_A 3-hydroxybenzoate hydro 98.2 2.2E-06 7.7E-11 91.9 9.6 37 57-93 31-68 (639)
171 2a8x_A Dihydrolipoyl dehydroge 98.2 2E-06 6.8E-11 88.7 8.8 106 57-179 170-275 (464)
172 2zbw_A Thioredoxin reductase; 98.2 4.4E-06 1.5E-10 81.9 10.8 103 57-178 151-255 (335)
173 3lzw_A Ferredoxin--NADP reduct 98.2 3E-06 1E-10 82.8 9.5 92 224-333 8-121 (332)
174 1fl2_A Alkyl hydroperoxide red 98.2 5.3E-06 1.8E-10 80.4 11.1 98 57-177 143-244 (310)
175 1zmd_A Dihydrolipoyl dehydroge 98.2 2.3E-06 8E-11 88.4 9.0 106 57-178 177-285 (474)
176 3alj_A 2-methyl-3-hydroxypyrid 98.2 9E-06 3.1E-10 81.4 12.9 98 224-341 12-164 (379)
177 3fg2_P Putative rubredoxin red 98.2 2E-06 6.9E-11 87.0 8.0 99 58-177 142-243 (404)
178 1onf_A GR, grase, glutathione 98.2 3.4E-06 1.2E-10 87.8 10.0 100 58-178 176-278 (500)
179 3nlc_A Uncharacterized protein 98.2 5.7E-06 2E-10 86.4 11.6 108 224-348 108-289 (549)
180 1q1r_A Putidaredoxin reductase 98.2 2.2E-06 7.5E-11 87.5 8.3 100 57-177 148-252 (431)
181 3axb_A Putative oxidoreductase 98.2 2.1E-06 7E-11 88.1 8.0 63 278-347 181-262 (448)
182 1chu_A Protein (L-aspartate ox 98.2 5.4E-06 1.8E-10 87.0 11.1 37 57-94 7-43 (540)
183 3cty_A Thioredoxin reductase; 98.2 7.5E-06 2.6E-10 79.8 11.5 98 58-178 155-255 (319)
184 3hyw_A Sulfide-quinone reducta 98.2 1.1E-06 3.9E-11 89.6 5.8 94 224-333 3-107 (430)
185 3itj_A Thioredoxin reductase 1 98.2 8.3E-06 2.8E-10 79.9 11.8 99 57-178 172-274 (338)
186 1dxl_A Dihydrolipoamide dehydr 98.2 2.4E-06 8E-11 88.3 8.1 106 57-179 176-283 (470)
187 2bc0_A NADH oxidase; flavoprot 98.2 2.8E-06 9.5E-11 88.3 8.6 101 56-178 192-294 (490)
188 1xhc_A NADH oxidase /nitrite r 98.2 1.6E-06 5.4E-11 86.6 6.4 94 58-177 143-236 (367)
189 1ojt_A Surface protein; redox- 98.2 1.4E-06 5E-11 90.2 6.3 104 57-178 184-289 (482)
190 2aqj_A Tryptophan halogenase, 98.2 3.2E-06 1.1E-10 88.9 9.1 34 58-91 5-41 (538)
191 4b1b_A TRXR, thioredoxin reduc 98.2 2.4E-06 8.3E-11 89.3 7.9 102 56-178 221-322 (542)
192 2r9z_A Glutathione amide reduc 98.2 3.2E-06 1.1E-10 87.1 8.8 102 58-178 166-267 (463)
193 2xve_A Flavin-containing monoo 98.2 9.9E-06 3.4E-10 83.4 12.4 105 224-339 3-170 (464)
194 3ics_A Coenzyme A-disulfide re 98.2 2.6E-06 8.7E-11 90.7 8.2 99 57-177 186-284 (588)
195 2q7v_A Thioredoxin reductase; 98.2 9.6E-06 3.3E-10 79.2 11.6 99 58-178 152-252 (325)
196 3cgb_A Pyridine nucleotide-dis 98.2 2.6E-06 8.8E-11 88.3 7.8 101 57-178 185-285 (480)
197 3urh_A Dihydrolipoyl dehydroge 98.2 5.4E-06 1.9E-10 86.1 10.1 106 57-179 197-304 (491)
198 1vdc_A NTR, NADPH dependent th 98.2 8.9E-06 3E-10 79.7 11.0 99 57-178 158-262 (333)
199 4hb9_A Similarities with proba 98.1 3E-06 1E-10 85.5 7.8 35 59-93 2-36 (412)
200 3oc4_A Oxidoreductase, pyridin 98.1 5.9E-06 2E-10 84.9 10.1 104 57-180 146-249 (452)
201 3lad_A Dihydrolipoamide dehydr 98.1 5.4E-06 1.9E-10 85.7 9.8 103 57-178 179-283 (476)
202 1fec_A Trypanothione reductase 98.1 3.2E-06 1.1E-10 87.7 8.0 100 57-178 186-291 (490)
203 3fbs_A Oxidoreductase; structu 98.1 5.2E-06 1.8E-10 79.7 9.0 90 57-178 140-229 (297)
204 3h8l_A NADH oxidase; membrane 98.1 3.5E-06 1.2E-10 85.3 8.1 101 224-339 2-115 (409)
205 2qae_A Lipoamide, dihydrolipoy 98.1 3.4E-06 1.2E-10 87.0 8.1 104 57-178 173-279 (468)
206 2hqm_A GR, grase, glutathione 98.1 2.8E-06 9.7E-11 87.9 7.3 100 57-177 184-287 (479)
207 3ab1_A Ferredoxin--NADP reduct 98.1 1.3E-05 4.3E-10 79.6 11.7 100 58-177 163-265 (360)
208 2cdu_A NADPH oxidase; flavoenz 98.1 6.2E-06 2.1E-10 84.7 9.7 102 57-178 148-250 (452)
209 2wpf_A Trypanothione reductase 98.1 3.5E-06 1.2E-10 87.5 7.9 100 57-178 190-295 (495)
210 1kf6_A Fumarate reductase flav 98.1 4.4E-06 1.5E-10 88.8 8.8 35 58-92 5-41 (602)
211 3vrd_B FCCB subunit, flavocyto 98.1 2.6E-06 8.8E-11 86.0 6.6 95 223-333 2-106 (401)
212 2a87_A TRXR, TR, thioredoxin r 98.1 1.3E-05 4.4E-10 78.7 11.5 101 57-180 154-257 (335)
213 3dgh_A TRXR-1, thioredoxin red 98.1 7.1E-06 2.4E-10 85.0 9.7 104 57-178 186-292 (483)
214 3ic9_A Dihydrolipoamide dehydr 98.1 5.3E-06 1.8E-10 86.1 8.7 106 57-179 173-278 (492)
215 3sx6_A Sulfide-quinone reducta 98.1 4.6E-06 1.6E-10 85.3 8.1 99 224-339 5-114 (437)
216 3v76_A Flavoprotein; structura 98.1 1.2E-05 4E-10 81.6 10.8 107 224-348 28-206 (417)
217 3f8d_A Thioredoxin reductase ( 98.1 1.3E-05 4.5E-10 77.8 10.8 92 224-333 16-123 (323)
218 2gjc_A Thiazole biosynthetic e 98.1 4.8E-06 1.7E-10 80.7 7.4 38 58-95 65-104 (326)
219 2r0c_A REBC; flavin adenine di 98.1 6.8E-06 2.3E-10 86.5 9.2 36 58-93 26-61 (549)
220 2rgh_A Alpha-glycerophosphate 98.1 5.4E-06 1.8E-10 87.7 8.4 34 58-91 32-65 (571)
221 1zk7_A HGII, reductase, mercur 98.1 5.1E-06 1.8E-10 85.7 8.0 100 57-178 175-274 (467)
222 3klj_A NAD(FAD)-dependent dehy 98.1 4.9E-06 1.7E-10 83.5 7.5 96 224-338 10-117 (385)
223 2q0l_A TRXR, thioredoxin reduc 98.1 1.3E-05 4.5E-10 77.6 10.3 99 57-178 142-244 (311)
224 3d1c_A Flavin-containing putat 98.1 1.6E-05 5.4E-10 79.1 11.0 96 224-338 5-146 (369)
225 3kd9_A Coenzyme A disulfide re 98.1 1.3E-05 4.3E-10 82.3 10.4 96 224-333 4-112 (449)
226 1pj5_A N,N-dimethylglycine oxi 98.1 4.2E-06 1.4E-10 92.7 7.2 35 58-92 4-39 (830)
227 3iwa_A FAD-dependent pyridine 98.1 6.1E-06 2.1E-10 85.2 7.9 99 58-177 159-260 (472)
228 3dgz_A Thioredoxin reductase 2 98.0 1E-05 3.5E-10 83.9 9.5 104 57-178 184-290 (488)
229 4gde_A UDP-galactopyranose mut 98.0 1.5E-06 5.2E-11 90.7 3.2 43 55-97 7-50 (513)
230 3dk9_A Grase, GR, glutathione 98.0 9.5E-06 3.3E-10 83.9 9.1 107 57-178 186-296 (478)
231 1xdi_A RV3303C-LPDA; reductase 98.0 5.5E-06 1.9E-10 86.2 7.2 102 57-178 181-282 (499)
232 2e4g_A Tryptophan halogenase; 98.0 7.7E-06 2.6E-10 86.2 8.4 35 57-91 24-61 (550)
233 1mo9_A ORF3; nucleotide bindin 98.0 8.5E-06 2.9E-10 85.3 8.7 101 59-178 215-319 (523)
234 2gv8_A Monooxygenase; FMO, FAD 98.0 2E-05 6.7E-10 80.8 11.2 102 224-339 7-181 (447)
235 2wdq_A Succinate dehydrogenase 98.0 1E-05 3.4E-10 85.8 8.9 36 58-93 7-42 (588)
236 3qfa_A Thioredoxin reductase 1 98.0 1.5E-05 5.3E-10 83.2 10.2 105 57-179 209-319 (519)
237 2h88_A Succinate dehydrogenase 98.0 1.1E-05 3.7E-10 85.8 9.1 35 58-92 18-52 (621)
238 2gqf_A Hypothetical protein HI 98.0 3.3E-05 1.1E-09 77.8 12.1 106 225-348 6-187 (401)
239 2bs2_A Quinol-fumarate reducta 98.0 1.4E-05 4.9E-10 85.5 9.8 35 58-92 5-39 (660)
240 3ntd_A FAD-dependent pyridine 98.0 1.3E-05 4.3E-10 84.9 9.3 100 58-177 151-269 (565)
241 3o0h_A Glutathione reductase; 98.0 8.4E-06 2.9E-10 84.5 7.6 103 57-179 190-292 (484)
242 1m6i_A Programmed cell death p 98.0 7.6E-06 2.6E-10 85.0 7.0 101 58-177 180-284 (493)
243 3h28_A Sulfide-quinone reducta 98.0 5.9E-06 2E-10 84.2 5.9 98 224-339 3-111 (430)
244 1qo8_A Flavocytochrome C3 fuma 98.0 9.1E-05 3.1E-09 78.2 15.2 54 280-333 252-310 (566)
245 3r9u_A Thioredoxin reductase; 98.0 4.4E-05 1.5E-09 73.8 11.5 91 224-333 5-116 (315)
246 3gyx_A Adenylylsulfate reducta 97.9 1.8E-05 6.3E-10 84.7 8.8 34 58-91 22-61 (662)
247 2i0z_A NAD(FAD)-utilizing dehy 97.9 8E-05 2.7E-09 76.2 13.2 108 225-348 28-210 (447)
248 3nks_A Protoporphyrinogen oxid 97.9 7.2E-06 2.5E-10 84.7 5.1 40 58-97 2-43 (477)
249 3gwf_A Cyclohexanone monooxyge 97.9 3.7E-05 1.3E-09 80.6 10.4 98 224-338 9-150 (540)
250 4ap3_A Steroid monooxygenase; 97.9 2.9E-05 1E-09 81.5 9.6 98 224-337 22-161 (549)
251 2e1m_A L-glutamate oxidase; L- 97.9 9.7E-06 3.3E-10 80.6 5.2 42 56-97 42-84 (376)
252 2x3n_A Probable FAD-dependent 97.9 7E-05 2.4E-09 75.3 11.6 93 224-333 7-164 (399)
253 4dna_A Probable glutathione re 97.8 2.5E-05 8.5E-10 80.4 7.9 102 57-179 169-272 (463)
254 3s5w_A L-ornithine 5-monooxyge 97.8 5.7E-05 1.9E-09 77.7 10.4 105 224-339 31-194 (463)
255 3uox_A Otemo; baeyer-villiger 97.8 4.2E-05 1.4E-09 80.3 9.4 99 224-338 10-150 (545)
256 3k30_A Histamine dehydrogenase 97.8 4.3E-05 1.5E-09 82.7 9.8 103 57-177 522-626 (690)
257 4a5l_A Thioredoxin reductase; 97.8 9.6E-05 3.3E-09 71.5 11.4 102 57-180 151-255 (314)
258 2b9w_A Putative aminooxidase; 97.8 1E-05 3.6E-10 82.1 4.6 41 57-97 5-46 (424)
259 2bcg_G Secretory pathway GDP d 97.8 1E-05 3.6E-10 83.0 4.5 41 57-97 10-50 (453)
260 1s3e_A Amine oxidase [flavin-c 97.8 1E-05 3.4E-10 84.7 4.3 71 57-127 3-79 (520)
261 1y0p_A Fumarate reductase flav 97.8 0.00014 4.7E-09 76.9 13.1 53 280-333 257-315 (571)
262 3i6d_A Protoporphyrinogen oxid 97.8 5.3E-06 1.8E-10 85.4 2.1 41 57-97 4-50 (470)
263 1hyu_A AHPF, alkyl hydroperoxi 97.8 0.00012 4.2E-09 76.3 12.2 94 223-333 212-324 (521)
264 2vou_A 2,6-dihydroxypyridine h 97.8 0.00012 4E-09 73.7 11.6 101 224-343 6-159 (397)
265 1rsg_A FMS1 protein; FAD bindi 97.8 8.7E-06 3E-10 85.1 3.3 40 58-97 8-48 (516)
266 4g6h_A Rotenone-insensitive NA 97.8 3.2E-05 1.1E-09 80.4 7.4 101 59-176 218-333 (502)
267 1k0i_A P-hydroxybenzoate hydro 97.8 0.00014 4.8E-09 72.9 12.0 95 225-333 4-161 (394)
268 2jae_A L-amino acid oxidase; o 97.8 1.5E-05 5.2E-10 82.6 5.0 42 56-97 9-50 (489)
269 1jnr_A Adenylylsulfate reducta 97.8 0.00011 3.6E-09 78.8 11.7 36 57-92 21-60 (643)
270 2vdc_G Glutamate synthase [NAD 97.8 1.5E-05 5.1E-10 81.7 4.7 88 222-333 121-217 (456)
271 3l8k_A Dihydrolipoyl dehydroge 97.7 0.00012 4E-09 75.4 11.2 93 225-333 6-142 (466)
272 1d4d_A Flavocytochrome C fumar 97.7 0.00017 5.6E-09 76.3 12.4 64 280-346 257-326 (572)
273 3nix_A Flavoprotein/dehydrogen 97.7 0.00012 4.2E-09 74.0 11.1 96 224-333 6-164 (421)
274 1v0j_A UDP-galactopyranose mut 97.7 1.4E-05 4.7E-10 80.7 3.7 42 57-98 6-48 (399)
275 2ivd_A PPO, PPOX, protoporphyr 97.7 1.9E-05 6.3E-10 81.6 4.8 42 56-97 14-55 (478)
276 3ihm_A Styrene monooxygenase A 97.7 1.4E-05 4.7E-10 81.5 3.6 36 56-91 20-55 (430)
277 1pn0_A Phenol 2-monooxygenase; 97.7 3.4E-05 1.2E-09 82.9 6.7 35 58-92 8-47 (665)
278 3hdq_A UDP-galactopyranose mut 97.7 1.9E-05 6.6E-10 79.1 4.2 42 56-97 27-68 (397)
279 1yvv_A Amine oxidase, flavin-c 97.7 0.00022 7.5E-09 69.7 11.8 91 225-332 4-159 (336)
280 2yg5_A Putrescine oxidase; oxi 97.7 1.3E-05 4.5E-10 82.2 2.9 70 58-127 5-79 (453)
281 4gcm_A TRXR, thioredoxin reduc 97.7 0.00017 5.8E-09 69.8 10.3 92 225-333 8-114 (312)
282 3atr_A Conserved archaeal prot 97.7 0.00019 6.3E-09 73.6 11.1 95 225-333 8-160 (453)
283 3ces_A MNMG, tRNA uridine 5-ca 97.7 0.00018 6E-09 76.1 10.9 92 225-333 30-179 (651)
284 1sez_A Protoporphyrinogen oxid 97.6 3.2E-05 1.1E-09 80.4 5.2 41 57-97 12-52 (504)
285 4fk1_A Putative thioredoxin re 97.6 0.00022 7.5E-09 68.8 10.7 92 225-333 8-115 (304)
286 2vvm_A Monoamine oxidase N; FA 97.6 2.6E-05 9E-10 80.9 4.4 40 58-97 39-78 (495)
287 3i3l_A Alkylhalidase CMLS; fla 97.6 0.00023 7.7E-09 75.3 11.5 96 224-333 24-186 (591)
288 1y56_B Sarcosine oxidase; dehy 97.6 0.00048 1.6E-08 68.6 12.8 50 281-333 152-203 (382)
289 1i8t_A UDP-galactopyranose mut 97.6 3.2E-05 1.1E-09 77.0 4.0 39 59-97 2-40 (367)
290 2x8g_A Thioredoxin glutathione 97.6 0.00014 4.7E-09 77.4 9.1 105 57-178 285-398 (598)
291 1c0p_A D-amino acid oxidase; a 97.6 3.8E-05 1.3E-09 76.3 4.5 36 56-91 4-39 (363)
292 3c96_A Flavin-containing monoo 97.6 0.00028 9.6E-09 71.2 10.8 101 225-341 6-173 (410)
293 2iid_A L-amino-acid oxidase; f 97.6 4E-05 1.4E-09 79.6 4.5 42 56-97 31-72 (498)
294 1ryi_A Glycine oxidase; flavop 97.6 0.00031 1.1E-08 70.0 10.9 61 279-347 165-227 (382)
295 2bi7_A UDP-galactopyranose mut 97.5 5.5E-05 1.9E-09 75.7 5.0 40 58-97 3-42 (384)
296 3lov_A Protoporphyrinogen oxid 97.5 4.4E-05 1.5E-09 78.8 4.0 39 58-96 4-44 (475)
297 3cgv_A Geranylgeranyl reductas 97.5 0.00054 1.8E-08 68.5 11.9 95 225-333 6-160 (397)
298 3qj4_A Renalase; FAD/NAD(P)-bi 97.5 0.00037 1.3E-08 68.4 10.5 39 291-332 122-162 (342)
299 1w4x_A Phenylacetone monooxyge 97.5 0.00038 1.3E-08 73.1 11.0 98 224-338 17-157 (542)
300 2zxi_A TRNA uridine 5-carboxym 97.5 0.00056 1.9E-08 72.0 12.1 92 225-333 29-178 (637)
301 3ihg_A RDME; flavoenzyme, anth 97.5 0.00057 1.9E-08 71.6 12.1 55 279-333 121-181 (535)
302 1cjc_A Protein (adrenodoxin re 97.5 7.4E-05 2.5E-09 76.7 5.1 90 223-334 6-105 (460)
303 1y56_A Hypothetical protein PH 97.5 0.00015 5.3E-09 75.1 7.5 94 224-333 109-217 (493)
304 3c4a_A Probable tryptophan hyd 97.5 4.7E-05 1.6E-09 76.1 3.4 35 59-93 1-37 (381)
305 1ps9_A 2,4-dienoyl-COA reducta 97.5 0.00039 1.3E-08 74.9 10.7 101 57-177 493-630 (671)
306 3rp8_A Flavoprotein monooxygen 97.5 0.00072 2.5E-08 68.0 12.0 101 222-343 22-187 (407)
307 4dsg_A UDP-galactopyranose mut 97.5 6.4E-05 2.2E-09 77.8 4.1 41 57-97 8-49 (484)
308 3oz2_A Digeranylgeranylglycero 97.4 0.00047 1.6E-08 68.7 10.3 95 225-333 6-160 (397)
309 3e1t_A Halogenase; flavoprotei 97.4 0.00053 1.8E-08 71.4 11.0 95 224-333 8-170 (512)
310 1lqt_A FPRA; NADP+ derivative, 97.4 7.4E-05 2.5E-09 76.6 4.1 92 224-333 4-106 (456)
311 2z3y_A Lysine-specific histone 97.4 0.0001 3.4E-09 79.4 5.3 41 56-96 105-145 (662)
312 2xag_A Lysine-specific histone 97.4 0.00011 3.8E-09 80.6 5.3 41 56-96 276-316 (852)
313 2gag_A Heterotetrameric sarcos 97.4 0.00021 7E-09 80.2 7.4 98 58-177 284-385 (965)
314 1o94_A Tmadh, trimethylamine d 97.4 0.00026 8.9E-09 77.0 8.0 107 57-177 527-648 (729)
315 3cp8_A TRNA uridine 5-carboxym 97.4 0.001 3.5E-08 70.2 12.0 93 224-333 22-172 (641)
316 1d5t_A Guanine nucleotide diss 97.4 0.00011 3.8E-09 74.8 4.6 41 57-97 5-45 (433)
317 2weu_A Tryptophan 5-halogenase 97.4 6.7E-05 2.3E-09 78.2 2.9 34 58-91 2-38 (511)
318 2gf3_A MSOX, monomeric sarcosi 97.3 0.0013 4.3E-08 65.6 12.0 51 279-333 151-203 (389)
319 2uzz_A N-methyl-L-tryptophan o 97.3 0.00097 3.3E-08 66.0 10.8 50 280-333 151-202 (372)
320 3g3e_A D-amino-acid oxidase; F 97.3 7.2E-05 2.5E-09 73.8 2.4 34 59-92 1-40 (351)
321 2pyx_A Tryptophan halogenase; 97.3 0.0001 3.5E-09 77.1 3.6 35 57-91 6-52 (526)
322 3fmw_A Oxygenase; mithramycin, 97.3 0.00085 2.9E-08 70.7 10.6 94 225-333 51-205 (570)
323 3nyc_A D-arginine dehydrogenas 97.3 0.00095 3.2E-08 66.2 10.5 59 281-347 157-217 (381)
324 3g5s_A Methylenetetrahydrofola 97.3 0.00012 4.2E-09 72.0 3.8 33 59-91 2-34 (443)
325 4hb9_A Similarities with proba 97.3 0.0014 4.9E-08 65.6 11.7 33 225-271 3-35 (412)
326 2qa2_A CABE, polyketide oxygen 97.3 0.0018 6.2E-08 67.1 12.7 97 222-333 11-164 (499)
327 2qa1_A PGAE, polyketide oxygen 97.3 0.0018 6.1E-08 67.1 12.5 96 223-333 11-163 (500)
328 2qcu_A Aerobic glycerol-3-phos 97.3 0.0021 7E-08 66.7 12.8 61 280-344 151-215 (501)
329 1gte_A Dihydropyrimidine dehyd 97.3 0.00013 4.4E-09 82.4 3.9 90 222-333 186-285 (1025)
330 2gmh_A Electron transfer flavo 97.2 0.002 6.7E-08 68.2 12.6 68 279-348 145-229 (584)
331 3p1w_A Rabgdi protein; GDI RAB 97.2 0.00015 5.2E-09 74.1 3.8 55 278-334 256-313 (475)
332 4gut_A Lysine-specific histone 97.2 0.00015 5E-09 79.1 3.9 41 56-96 334-374 (776)
333 1b37_A Protein (polyamine oxid 97.2 0.00017 5.9E-09 74.3 4.1 41 57-97 3-44 (472)
334 2oln_A NIKD protein; flavoprot 97.2 0.0031 1.1E-07 63.1 13.3 58 282-347 157-216 (397)
335 2xdo_A TETX2 protein; tetracyc 97.2 0.0014 4.8E-08 65.7 10.6 91 224-333 27-180 (398)
336 3ps9_A TRNA 5-methylaminomethy 97.2 0.002 6.9E-08 69.4 12.1 48 283-333 422-471 (676)
337 4at0_A 3-ketosteroid-delta4-5a 97.2 0.0039 1.3E-07 64.8 13.7 55 279-333 203-262 (510)
338 3da1_A Glycerol-3-phosphate de 97.1 0.0022 7.5E-08 67.4 11.4 63 281-347 173-240 (561)
339 3c4n_A Uncharacterized protein 97.1 0.0016 5.5E-08 65.5 9.7 61 280-348 174-246 (405)
340 4g65_A TRK system potassium up 97.0 0.0009 3.1E-08 68.4 7.3 34 57-90 2-35 (461)
341 1pj5_A N,N-dimethylglycine oxi 97.0 0.0035 1.2E-07 69.3 12.3 51 280-333 153-205 (830)
342 2dkh_A 3-hydroxybenzoate hydro 97.0 0.002 6.8E-08 68.9 9.9 55 279-333 142-209 (639)
343 3c4a_A Probable tryptophan hyd 97.0 0.00057 1.9E-08 68.2 5.1 85 225-333 2-141 (381)
344 1kf6_A Fumarate reductase flav 96.9 0.0071 2.4E-07 64.1 13.4 51 282-332 138-194 (602)
345 2gjc_A Thiazole biosynthetic e 96.9 0.0064 2.2E-07 58.8 11.9 70 224-305 66-174 (326)
346 2r0c_A REBC; flavin adenine di 96.9 0.0053 1.8E-07 64.4 11.9 51 280-333 140-194 (549)
347 3pvc_A TRNA 5-methylaminomethy 96.9 0.0038 1.3E-07 67.4 11.0 48 284-334 418-468 (689)
348 3jsk_A Cypbp37 protein; octame 96.9 0.01 3.5E-07 57.7 12.9 138 224-376 80-304 (344)
349 3dje_A Fructosyl amine: oxygen 96.9 0.0058 2E-07 62.0 11.7 53 279-333 162-219 (438)
350 3ayj_A Pro-enzyme of L-phenyla 96.8 0.00034 1.2E-08 74.9 2.2 36 58-93 56-100 (721)
351 4b63_A L-ornithine N5 monooxyg 96.8 0.004 1.4E-07 64.5 9.7 114 224-339 40-216 (501)
352 2aqj_A Tryptophan halogenase, 96.7 0.0087 3E-07 62.5 12.2 49 282-333 169-220 (538)
353 1kdg_A CDH, cellobiose dehydro 96.6 0.00092 3.2E-08 70.1 3.5 36 57-92 6-41 (546)
354 2e5v_A L-aspartate oxidase; ar 96.6 0.01 3.5E-07 60.9 11.2 49 281-333 122-174 (472)
355 2rgh_A Alpha-glycerophosphate 96.6 0.015 5.2E-07 61.1 12.4 58 284-345 194-256 (571)
356 3t37_A Probable dehydrogenase; 96.5 0.0016 5.5E-08 67.9 4.2 35 58-92 17-52 (526)
357 2wdq_A Succinate dehydrogenase 96.4 0.027 9.4E-07 59.4 13.1 50 284-333 149-204 (588)
358 3q9t_A Choline dehydrogenase a 96.3 0.0028 9.5E-08 66.7 4.8 36 57-92 5-41 (577)
359 2e4g_A Tryptophan halogenase; 96.3 0.026 8.9E-07 59.1 12.1 52 279-333 195-250 (550)
360 1ju2_A HydroxynitrIle lyase; f 96.2 0.0023 7.8E-08 66.9 3.9 36 57-93 25-60 (536)
361 2h88_A Succinate dehydrogenase 96.1 0.037 1.3E-06 58.7 12.1 50 284-333 161-215 (621)
362 1pn0_A Phenol 2-monooxygenase; 96.1 0.028 9.5E-07 60.3 11.2 21 224-244 9-29 (665)
363 2pyx_A Tryptophan halogenase; 96.0 0.032 1.1E-06 58.0 11.1 50 281-333 178-231 (526)
364 3qvp_A Glucose oxidase; oxidor 96.0 0.0045 1.6E-07 65.1 4.4 35 57-91 18-53 (583)
365 1coy_A Cholesterol oxidase; ox 96.0 0.0044 1.5E-07 64.2 4.3 38 56-93 9-46 (507)
366 2bs2_A Quinol-fumarate reducta 95.9 0.047 1.6E-06 58.2 12.2 49 285-333 165-218 (660)
367 1n4w_A CHOD, cholesterol oxida 95.9 0.0039 1.3E-07 64.6 3.4 37 58-94 5-41 (504)
368 1chu_A Protein (L-aspartate ox 95.8 0.021 7E-07 59.7 8.8 42 291-332 152-205 (540)
369 1gpe_A Protein (glucose oxidas 95.8 0.0053 1.8E-07 64.9 4.2 37 57-93 23-60 (587)
370 2weu_A Tryptophan 5-halogenase 95.7 0.05 1.7E-06 56.3 11.2 52 279-333 174-228 (511)
371 3fim_B ARYL-alcohol oxidase; A 95.7 0.0044 1.5E-07 65.0 3.0 36 58-93 2-38 (566)
372 2jbv_A Choline oxidase; alcoho 95.6 0.0078 2.7E-07 63.0 4.7 37 57-93 12-49 (546)
373 3fwz_A Inner membrane protein 95.6 0.0095 3.2E-07 50.0 4.3 35 56-90 5-39 (140)
374 3kkj_A Amine oxidase, flavin-c 95.6 0.0083 2.8E-07 55.7 4.3 34 225-272 4-37 (336)
375 2g1u_A Hypothetical protein TM 95.4 0.01 3.4E-07 50.7 3.9 36 56-91 17-52 (155)
376 3eag_A UDP-N-acetylmuramate:L- 95.4 0.019 6.5E-07 55.7 6.2 35 57-91 3-38 (326)
377 4gut_A Lysine-specific histone 95.1 0.13 4.5E-06 55.9 12.0 39 291-332 542-582 (776)
378 3dfz_A SIRC, precorrin-2 dehyd 95.0 0.058 2E-06 48.9 7.7 108 222-375 30-141 (223)
379 1lss_A TRK system potassium up 95.0 0.016 5.6E-07 48.1 3.7 33 58-90 4-36 (140)
380 1vg0_A RAB proteins geranylger 94.9 0.018 6.3E-07 60.7 4.6 41 56-96 6-46 (650)
381 3dfz_A SIRC, precorrin-2 dehyd 94.9 0.019 6.6E-07 52.1 4.1 35 56-90 29-63 (223)
382 3ic5_A Putative saccharopine d 94.8 0.016 5.5E-07 46.5 3.2 34 57-90 4-38 (118)
383 3llv_A Exopolyphosphatase-rela 94.8 0.018 6.2E-07 48.1 3.4 33 58-90 6-38 (141)
384 1id1_A Putative potassium chan 94.5 0.026 9E-07 47.9 3.8 33 58-90 3-35 (153)
385 1jnr_A Adenylylsulfate reducta 94.3 0.13 4.5E-06 54.7 9.7 45 289-333 162-216 (643)
386 2x5o_A UDP-N-acetylmuramoylala 94.2 0.025 8.6E-07 57.3 3.6 35 58-92 5-39 (439)
387 1kyq_A Met8P, siroheme biosynt 94.2 0.021 7.1E-07 53.6 2.6 34 57-90 12-45 (274)
388 4dgk_A Phytoene dehydrogenase; 94.1 0.028 9.7E-07 57.9 3.9 36 224-273 2-37 (501)
389 3gyx_A Adenylylsulfate reducta 93.7 0.13 4.3E-06 55.0 8.0 41 292-332 182-230 (662)
390 3lk7_A UDP-N-acetylmuramoylala 93.6 0.07 2.4E-06 54.2 5.6 74 222-333 8-82 (451)
391 3c85_A Putative glutathione-re 93.6 0.038 1.3E-06 48.5 3.1 34 57-90 38-72 (183)
392 2hmt_A YUAA protein; RCK, KTN, 93.6 0.036 1.2E-06 46.1 2.8 33 58-90 6-38 (144)
393 3lk7_A UDP-N-acetylmuramoylala 93.4 0.04 1.4E-06 56.0 3.5 35 57-91 8-42 (451)
394 3oj0_A Glutr, glutamyl-tRNA re 93.3 0.081 2.8E-06 44.3 4.6 33 58-90 21-53 (144)
395 4dio_A NAD(P) transhydrogenase 92.9 0.072 2.5E-06 52.8 4.3 35 57-91 189-223 (405)
396 3l4b_C TRKA K+ channel protien 92.7 0.058 2E-06 48.8 3.1 32 59-90 1-32 (218)
397 3ihm_A Styrene monooxygenase A 92.4 0.096 3.3E-06 52.8 4.5 33 224-270 23-55 (430)
398 2iid_A L-amino-acid oxidase; f 92.4 0.12 4E-06 53.1 5.3 37 223-273 33-69 (498)
399 1f0y_A HCDH, L-3-hydroxyacyl-C 92.3 0.1 3.5E-06 49.9 4.4 34 58-91 15-48 (302)
400 4gde_A UDP-galactopyranose mut 92.3 0.12 4.1E-06 53.2 5.1 36 224-272 11-46 (513)
401 1pzg_A LDH, lactate dehydrogen 92.3 0.098 3.4E-06 50.7 4.2 37 55-91 6-43 (331)
402 3eag_A UDP-N-acetylmuramate:L- 92.2 0.18 6.3E-06 48.7 6.0 71 223-333 4-76 (326)
403 3nrn_A Uncharacterized protein 92.1 0.12 4.3E-06 51.7 4.9 34 225-272 2-35 (421)
404 3p2y_A Alanine dehydrogenase/p 92.1 0.076 2.6E-06 52.2 3.1 35 57-91 183-217 (381)
405 3i83_A 2-dehydropantoate 2-red 92.0 0.1 3.4E-06 50.4 3.9 33 58-90 2-34 (320)
406 3fwz_A Inner membrane protein 91.7 0.22 7.7E-06 41.3 5.3 33 224-270 8-40 (140)
407 4ffl_A PYLC; amino acid, biosy 91.5 0.12 4.2E-06 50.7 4.0 35 58-92 1-35 (363)
408 3ka7_A Oxidoreductase; structu 91.5 0.16 5.3E-06 50.9 4.8 34 225-272 2-35 (425)
409 2a9f_A Putative malic enzyme ( 91.4 0.1 3.5E-06 51.2 3.2 35 57-91 187-222 (398)
410 2g1u_A Hypothetical protein TM 91.4 0.26 8.9E-06 41.7 5.5 36 222-271 18-53 (155)
411 1x13_A NAD(P) transhydrogenase 91.3 0.13 4.3E-06 51.4 3.9 34 58-91 172-205 (401)
412 3i6d_A Protoporphyrinogen oxid 91.2 0.14 4.8E-06 51.9 4.2 41 224-272 6-46 (470)
413 1l7d_A Nicotinamide nucleotide 91.0 0.16 5.6E-06 50.3 4.3 35 57-91 171-205 (384)
414 3dme_A Conserved exported prot 91.0 0.17 5.9E-06 49.2 4.5 33 225-271 6-38 (369)
415 1vl6_A Malate oxidoreductase; 90.9 0.12 4.2E-06 50.5 3.2 34 57-90 191-225 (388)
416 3nks_A Protoporphyrinogen oxid 90.8 0.16 5.6E-06 51.6 4.3 34 224-271 3-38 (477)
417 3k7m_X 6-hydroxy-L-nicotine ox 90.8 0.17 5.9E-06 50.7 4.4 34 225-272 3-36 (431)
418 2e1m_A L-glutamate oxidase; L- 90.8 0.21 7.3E-06 49.2 4.9 37 222-272 43-80 (376)
419 1pjq_A CYSG, siroheme synthase 90.7 0.13 4.4E-06 52.3 3.4 33 58-90 12-44 (457)
420 1lld_A L-lactate dehydrogenase 90.6 0.16 5.6E-06 48.8 3.9 33 58-90 7-41 (319)
421 3g5s_A Methylenetetrahydrofola 90.6 0.19 6.6E-06 49.5 4.3 33 224-270 2-34 (443)
422 2b9w_A Putative aminooxidase; 90.6 0.19 6.4E-06 50.3 4.5 35 224-272 7-42 (424)
423 3hn2_A 2-dehydropantoate 2-red 90.6 0.12 4.1E-06 49.6 2.9 33 58-90 2-34 (312)
424 2ew2_A 2-dehydropantoate 2-red 90.6 0.16 5.5E-06 48.5 3.8 33 58-90 3-35 (316)
425 3k96_A Glycerol-3-phosphate de 90.6 0.21 7.1E-06 48.9 4.6 35 57-91 28-62 (356)
426 3fpz_A Thiazole biosynthetic e 90.6 0.2 6.8E-06 48.3 4.4 70 222-303 64-141 (326)
427 3gg2_A Sugar dehydrogenase, UD 90.4 0.17 5.9E-06 51.2 3.9 33 59-91 3-35 (450)
428 3llv_A Exopolyphosphatase-rela 90.4 0.36 1.2E-05 39.9 5.3 34 223-270 6-39 (141)
429 2raf_A Putative dinucleotide-b 90.4 0.21 7.2E-06 44.8 4.1 36 57-92 18-53 (209)
430 1rsg_A FMS1 protein; FAD bindi 90.2 0.2 7E-06 51.7 4.5 35 223-271 8-43 (516)
431 1pjc_A Protein (L-alanine dehy 90.2 0.19 6.4E-06 49.4 3.9 33 58-90 167-199 (361)
432 4e12_A Diketoreductase; oxidor 90.2 0.22 7.5E-06 47.0 4.3 34 58-91 4-37 (283)
433 3ghy_A Ketopantoate reductase 90.1 0.86 2.9E-05 44.0 8.5 87 224-346 4-90 (335)
434 3ego_A Probable 2-dehydropanto 90.0 0.24 8.2E-06 47.4 4.4 32 58-90 2-33 (307)
435 2jae_A L-amino acid oxidase; o 90.0 0.25 8.7E-06 50.5 4.9 36 223-272 11-46 (489)
436 2gag_B Heterotetrameric sarcos 89.8 0.25 8.7E-06 48.9 4.6 33 224-270 22-56 (405)
437 1ks9_A KPA reductase;, 2-dehyd 89.8 0.23 7.8E-06 46.8 4.1 33 59-91 1-33 (291)
438 3ius_A Uncharacterized conserv 89.8 0.22 7.6E-06 46.7 4.0 34 57-90 4-37 (286)
439 1c0p_A D-amino acid oxidase; a 89.8 0.29 9.9E-06 47.8 4.9 32 224-269 7-38 (363)
440 3doj_A AT3G25530, dehydrogenas 89.7 0.24 8.1E-06 47.5 4.2 36 56-91 19-54 (310)
441 3ado_A Lambda-crystallin; L-gu 89.6 0.21 7.3E-06 47.9 3.6 34 58-91 6-39 (319)
442 3phh_A Shikimate dehydrogenase 89.5 0.27 9.2E-06 45.9 4.1 34 58-91 118-151 (269)
443 3qha_A Putative oxidoreductase 89.4 0.27 9.1E-06 46.8 4.2 34 58-91 15-48 (296)
444 1s3e_A Amine oxidase [flavin-c 89.4 0.24 8.4E-06 51.1 4.3 39 292-333 226-266 (520)
445 3hwr_A 2-dehydropantoate 2-red 89.4 1.6 5.3E-05 41.8 9.7 100 221-356 17-117 (318)
446 2ewd_A Lactate dehydrogenase,; 89.3 0.23 8E-06 47.7 3.7 34 58-91 4-38 (317)
447 2aef_A Calcium-gated potassium 89.3 0.23 7.7E-06 45.4 3.4 33 57-90 8-40 (234)
448 1jw9_B Molybdopterin biosynthe 89.2 0.21 7E-06 46.3 3.2 34 58-91 31-65 (249)
449 3g3e_A D-amino-acid oxidase; F 89.2 0.3 1E-05 47.5 4.4 38 225-270 2-39 (351)
450 2egg_A AROE, shikimate 5-dehyd 89.1 0.34 1.2E-05 46.1 4.7 34 57-90 140-174 (297)
451 2hjr_A Malate dehydrogenase; m 89.1 0.3 1E-05 47.2 4.3 34 58-91 14-48 (328)
452 1nyt_A Shikimate 5-dehydrogena 89.1 0.28 9.5E-06 46.0 4.0 34 57-90 118-151 (271)
453 2yg5_A Putrescine oxidase; oxi 88.9 0.3 1E-05 49.3 4.5 34 224-271 6-39 (453)
454 3vtf_A UDP-glucose 6-dehydroge 88.8 0.29 1E-05 49.1 4.1 39 53-91 16-54 (444)
455 3g0o_A 3-hydroxyisobutyrate de 88.8 0.28 9.7E-06 46.7 3.9 34 57-90 6-39 (303)
456 2bi7_A UDP-galactopyranose mut 88.8 0.34 1.2E-05 47.9 4.7 35 225-273 5-39 (384)
457 2eez_A Alanine dehydrogenase; 88.8 0.28 9.6E-06 48.3 3.9 33 58-90 166-198 (369)
458 3g17_A Similar to 2-dehydropan 88.6 0.16 5.4E-06 48.3 2.0 34 58-91 2-35 (294)
459 2y0c_A BCEC, UDP-glucose dehyd 88.5 0.29 9.9E-06 50.0 3.9 34 58-91 8-41 (478)
460 2ew2_A 2-dehydropantoate 2-red 88.4 1.1 3.6E-05 42.7 7.7 32 225-270 5-36 (316)
461 2vvm_A Monoamine oxidase N; FA 88.4 0.37 1.3E-05 49.3 4.8 41 290-333 267-310 (495)
462 3c24_A Putative oxidoreductase 88.3 0.38 1.3E-05 45.3 4.5 34 57-90 10-44 (286)
463 3e8x_A Putative NAD-dependent 88.3 0.29 1E-05 44.5 3.5 35 56-90 19-54 (236)
464 3lov_A Protoporphyrinogen oxid 88.3 0.41 1.4E-05 48.6 5.0 36 224-271 5-40 (475)
465 3hdq_A UDP-galactopyranose mut 88.3 0.37 1.3E-05 47.8 4.5 36 224-273 30-65 (397)
466 2vhw_A Alanine dehydrogenase; 88.3 0.31 1.1E-05 48.1 3.9 34 57-90 167-200 (377)
467 2bcg_G Secretory pathway GDP d 88.3 0.35 1.2E-05 49.0 4.4 37 224-274 12-48 (453)
468 2ivd_A PPO, PPOX, protoporphyr 88.3 0.31 1E-05 49.6 4.0 35 223-271 16-50 (478)
469 1z82_A Glycerol-3-phosphate de 88.2 0.32 1.1E-05 47.1 3.9 35 56-90 12-46 (335)
470 2v6b_A L-LDH, L-lactate dehydr 88.2 0.32 1.1E-05 46.5 3.8 32 59-90 1-34 (304)
471 3pid_A UDP-glucose 6-dehydroge 88.1 0.4 1.4E-05 48.0 4.6 35 56-91 34-68 (432)
472 1zej_A HBD-9, 3-hydroxyacyl-CO 88.1 0.41 1.4E-05 45.3 4.4 34 57-91 11-44 (293)
473 3ghy_A Ketopantoate reductase 88.1 0.31 1.1E-05 47.2 3.7 33 58-90 3-35 (335)
474 3l9w_A Glutathione-regulated p 88.1 0.28 9.7E-06 49.0 3.5 34 58-91 4-37 (413)
475 1sez_A Protoporphyrinogen oxid 88.0 0.38 1.3E-05 49.3 4.6 35 224-272 14-48 (504)
476 1zcj_A Peroxisomal bifunctiona 88.0 0.55 1.9E-05 47.7 5.7 34 58-91 37-70 (463)
477 1y6j_A L-lactate dehydrogenase 88.0 0.33 1.1E-05 46.6 3.8 34 57-90 6-41 (318)
478 3ego_A Probable 2-dehydropanto 88.0 1.6 5.5E-05 41.5 8.7 31 225-270 4-34 (307)
479 1ur5_A Malate dehydrogenase; o 88.0 0.35 1.2E-05 46.2 4.0 34 58-91 2-36 (309)
480 3tl2_A Malate dehydrogenase; c 87.9 0.39 1.3E-05 46.0 4.2 34 57-90 7-41 (315)
481 1bg6_A N-(1-D-carboxylethyl)-L 87.9 0.34 1.2E-05 47.2 3.9 32 59-90 5-36 (359)
482 2dpo_A L-gulonate 3-dehydrogen 87.8 0.33 1.1E-05 46.7 3.6 34 58-91 6-39 (319)
483 2z3y_A Lysine-specific histone 87.6 0.44 1.5E-05 50.9 4.9 36 222-271 106-141 (662)
484 2vns_A Metalloreductase steap3 87.6 0.33 1.1E-05 43.7 3.3 33 58-90 28-60 (215)
485 3dtt_A NADP oxidoreductase; st 87.5 0.38 1.3E-05 44.3 3.8 36 56-91 17-52 (245)
486 1jay_A Coenzyme F420H2:NADP+ o 87.5 0.47 1.6E-05 42.4 4.3 32 59-90 1-33 (212)
487 3don_A Shikimate dehydrogenase 87.5 0.34 1.2E-05 45.5 3.4 35 57-91 116-151 (277)
488 2xag_A Lysine-specific histone 87.4 0.47 1.6E-05 52.0 4.9 36 222-271 277-312 (852)
489 3dhn_A NAD-dependent epimerase 87.4 0.48 1.6E-05 42.6 4.3 34 58-91 4-38 (227)
490 3pef_A 6-phosphogluconate dehy 87.4 0.37 1.3E-05 45.5 3.7 33 59-91 2-34 (287)
491 1dlj_A UDP-glucose dehydrogena 87.4 0.48 1.6E-05 47.2 4.7 32 59-91 1-32 (402)
492 2qyt_A 2-dehydropantoate 2-red 87.3 0.23 7.8E-06 47.5 2.2 33 57-89 7-45 (317)
493 1t2d_A LDH-P, L-lactate dehydr 87.3 0.46 1.6E-05 45.7 4.4 34 58-91 4-38 (322)
494 3g79_A NDP-N-acetyl-D-galactos 87.3 0.39 1.3E-05 48.9 3.9 35 58-92 18-54 (478)
495 3l6d_A Putative oxidoreductase 87.3 0.5 1.7E-05 45.1 4.5 34 57-90 8-41 (306)
496 1v0j_A UDP-galactopyranose mut 87.3 0.4 1.4E-05 47.7 4.0 37 224-273 8-44 (399)
497 1kyq_A Met8P, siroheme biosynt 87.2 0.41 1.4E-05 44.7 3.8 35 222-270 12-46 (274)
498 2we8_A Xanthine dehydrogenase; 87.2 0.52 1.8E-05 46.4 4.7 38 57-94 203-240 (386)
499 1p77_A Shikimate 5-dehydrogena 87.2 0.29 1E-05 45.9 2.8 34 57-90 118-151 (272)
500 3pqe_A L-LDH, L-lactate dehydr 87.1 0.38 1.3E-05 46.3 3.6 34 57-90 4-39 (326)
No 1
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=100.00 E-value=2.3e-54 Score=452.28 Aligned_cols=322 Identities=41% Similarity=0.769 Sum_probs=281.8
Q ss_pred CCCCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEE
Q 010217 55 GIKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAEC 134 (515)
Q Consensus 55 ~~~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v 134 (515)
...+++|||||||+||+++|..|++.+++|||||+++++.|+|+++.+..|.++++++..+++.++......++++.++|
T Consensus 39 ~~~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~~~~PlL~~va~G~l~~~~i~~p~~~~~~~~~~~v~~~~~~v 118 (502)
T 4g6h_A 39 HSDKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNFALKKKGNVTYYEAEA 118 (502)
T ss_dssp SCSSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEEECGGGGGGTTTTSSCGGGGEEEHHHHHTTCSSCEEEEEEEE
T ss_pred CCCCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCcccccchhHHhhccccHHHhhhhHHHHHHhhcCCeEEEEEEE
Confidence 34578999999999999999999999999999999999999999999999999999999998887765544567889999
Q ss_pred EEEecCCCEEEEeeCCcc----------CCCCCceEEeecCEEEEccCCCcCCCCCCCCCCccccccChhHHHHHHHHHH
Q 010217 135 FKIDAENKKVYCRSSQNT----------NLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENCNFLKEVEDAQRIRRNVI 204 (515)
Q Consensus 135 ~~id~~~~~v~~~~~~~~----------~~~~~~~~~~~~d~lviAtG~~~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~ 204 (515)
+.||++.+.|++++.... .....+..++.||+||||||+.|+.+++||+.++++++++++++.++++.+.
T Consensus 119 ~~ID~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~~~ipG~~e~a~~l~t~~dA~~ir~~l~ 198 (502)
T 4g6h_A 119 TSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTFGIPGVTDYGHFLKEIPNSLEIRRTFA 198 (502)
T ss_dssp EEEEGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECCTTCTTHHHHCEECSSHHHHHHHHHHHH
T ss_pred EEEEhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCcccccCCccCcccccCCCCCHHHHHHHHHHHH
Confidence 999999999988652110 0011223589999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccccccccHHHHHHH
Q 010217 205 ESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFA 284 (515)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~ 284 (515)
.+++.+.++...+++++..++++|||||++|+|+|.+|.+++.+++.+.||.+....+|+++++.+++++.+++.+++.+
T Consensus 199 ~~~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~~~~~~~~~~~ 278 (502)
T 4g6h_A 199 ANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMFEKKLSSYA 278 (502)
T ss_dssp HHHHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSSTTSCHHHHHHH
T ss_pred HHHHHHhcccccchhhccccceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccccCCCHHHHHHH
Confidence 99999888777777788889999999999999999999999999999999887777899999999999999999999999
Q ss_pred HHHhhcCCeEEEcCcEEEEEeCCeEEEEe-cCCCce--EEEecCeEEEccCCCCccchHHHHHHhCC--CCCCceeeCCC
Q 010217 285 EEKFSRDGIDVKLGSMVVKVTDKEIFTKV-RGNGET--SSMPYGMVVWSTGIAPHAIIKDFMKQVGQ--TNRRALATDEW 359 (515)
Q Consensus 285 ~~~l~~~gV~v~~~~~v~~i~~~~v~~~~-~~~G~~--~~i~~D~vi~a~G~~~~p~~~~l~~~~~~--~~~g~i~vd~~ 359 (515)
++.|++.||+++++++|++++++++.+.. ..+|+. .+|++|+||||+|+.++|.+..+...++. +.+|+|.||++
T Consensus 279 ~~~L~~~GV~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~~~~~~~l~~~~~~~~~~~g~I~Vd~~ 358 (502)
T 4g6h_A 279 QSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNKARPVITDLFKKIPEQNSSKRGLAVNDF 358 (502)
T ss_dssp HHHHHHTTCEEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCEECCHHHHHHHHHSGGGTTCCSSEEBCTT
T ss_pred HHHHHhcceeeecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccCCcCCHHHHhHHHhccccccCCCceeECCc
Confidence 99999999999999999999998876553 345542 36999999999998777777677676665 67789999999
Q ss_pred ccccCCCCEEEeccccc
Q 010217 360 LRVEGSDSIYALGDCAT 376 (515)
Q Consensus 360 l~t~~~~~IyA~GD~~~ 376 (515)
||++++|||||+|||+.
T Consensus 359 lq~~~~~~IfAiGD~a~ 375 (502)
T 4g6h_A 359 LQVKGSNNIFAIGDNAF 375 (502)
T ss_dssp SBBTTCSSEEECGGGEE
T ss_pred cccCCCCCEEEEEcccC
Confidence 99989999999999986
No 2
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=100.00 E-value=3.8e-41 Score=347.23 Aligned_cols=275 Identities=21% Similarity=0.341 Sum_probs=230.5
Q ss_pred CeEEEECCcHHHHHHHHhccCCC--CeEEEEcCCCCCccC-CccchhccCcccccc--cccchHHHHhhcCceEEEEEeE
Q 010217 59 KKVVVLGTGWAGTSFLKNLNNPS--YDVQVISPRNYFAFT-PLLPSVTCGTVEARS--IVEPVRNIVRKKNVDICFWEAE 133 (515)
Q Consensus 59 ~~VvIIGgG~AGlsaA~~L~~~g--~~V~vie~~~~~~~~-~~~~~~~~g~~~~~~--~~~~~~~~~~~~~i~v~~~~~~ 133 (515)
+|||||||||||++||.+|++.| .+|+|||+++.+.|. +.++.+..+...... +......++++.++++ ....+
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~ 79 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVEDRRYALAYTPEKFYDRKQITV-KTYHE 79 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGGGHHHHHTTSSCCGGGTBCCCHHHHHHHHCCEE-EETEE
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcchhHHHHcCCccchhhhhhcCHHHHHHhcCCEE-EeCCe
Confidence 47999999999999999998666 679999999887765 466665555443322 3334567778889887 35778
Q ss_pred EEEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCCCCCCCCccccccChhHHHHHHHHHHHHHHhcCCC
Q 010217 134 CFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLP 213 (515)
Q Consensus 134 v~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 213 (515)
|+.||...+.+.+.... .++..++.||+||||||++|+.|++|| +..+.+++.+++..++..+..
T Consensus 80 V~~id~~~~~~~~~~~~-----~~~~~~~~yd~lVIATGs~p~~p~i~g--~~~~~~~~~~~~~~l~~~~~~-------- 144 (437)
T 4eqs_A 80 VIAINDERQTVSVLNRK-----TNEQFEESYDKLILSPGASANSLGFES--DITFTLRNLEDTDAIDQFIKA-------- 144 (437)
T ss_dssp EEEEETTTTEEEEEETT-----TTEEEEEECSEEEECCCEEECCCCCCC--TTEECCSSHHHHHHHHHHHHH--------
T ss_pred EEEEEccCcEEEEEecc-----CCceEEEEcCEEEECCCCccccccccC--ceEEeeccHHHHHHHHHhhhc--------
Confidence 99999999999887654 344568999999999999999999998 456788999999888766532
Q ss_pred CCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccccccccHHHHHHHHHHhhcCCe
Q 010217 214 NLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGI 293 (515)
Q Consensus 214 ~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV 293 (515)
.++++++|||||++|+|+|..+.++ +.+||++++.+++++.+++++.+.+.+.+++.||
T Consensus 145 -------~~~~~vvViGgG~ig~E~A~~l~~~--------------g~~Vtlv~~~~~ll~~~d~~~~~~~~~~l~~~gV 203 (437)
T 4eqs_A 145 -------NQVDKVLVVGAGYVSLEVLENLYER--------------GLHPTLIHRSDKINKLMDADMNQPILDELDKREI 203 (437)
T ss_dssp -------HTCCEEEEECCSHHHHHHHHHHHHH--------------TCEEEEEESSSCCSTTSCGGGGHHHHHHHHHTTC
T ss_pred -------cCCcEEEEECCccchhhhHHHHHhc--------------CCcceeeeeeccccccccchhHHHHHHHhhccce
Confidence 2567999999999999999999987 6899999999999999999999999999999999
Q ss_pred EEEcCcEEEEEeCCeEEEEecCCCceEEEecCeEEEccCCCCccchHHHHHHhCC--CCCCceeeCCCccccCCCCEEEe
Q 010217 294 DVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ--TNRRALATDEWLRVEGSDSIYAL 371 (515)
Q Consensus 294 ~v~~~~~v~~i~~~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~~~--~~~g~i~vd~~l~t~~~~~IyA~ 371 (515)
++++++.|++++++.+.+ .+|+. +++|.|+||+| ..|++ .+++..++ +.+|+|.||+++|| ++|||||+
T Consensus 204 ~i~~~~~v~~~~~~~v~~---~~g~~--~~~D~vl~a~G--~~Pn~-~~~~~~gl~~~~~G~I~vd~~~~T-s~p~IyA~ 274 (437)
T 4eqs_A 204 PYRLNEEINAINGNEITF---KSGKV--EHYDMIIEGVG--THPNS-KFIESSNIKLDRKGFIPVNDKFET-NVPNIYAI 274 (437)
T ss_dssp CEEESCCEEEEETTEEEE---TTSCE--EECSEEEECCC--EEESC-GGGTTSSCCCCTTSCEECCTTCBC-SSTTEEEC
T ss_pred EEEeccEEEEecCCeeee---cCCeE--EeeeeEEEEec--eecCc-HHHHhhhhhhccCCcEecCCCccC-CCCCEEEE
Confidence 999999999999887654 45775 99999999999 68888 67777777 67899999999998 99999999
Q ss_pred ccccccCc
Q 010217 372 GDCATVNQ 379 (515)
Q Consensus 372 GD~~~~~~ 379 (515)
|||+..+.
T Consensus 275 GDva~~~~ 282 (437)
T 4eqs_A 275 GDIATSHY 282 (437)
T ss_dssp GGGEEEEB
T ss_pred EEccCccc
Confidence 99998654
No 3
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=100.00 E-value=1.8e-41 Score=349.51 Aligned_cols=287 Identities=23% Similarity=0.368 Sum_probs=227.3
Q ss_pred CCeEEEECCcHHHHHHHHhccC--CCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEE
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNN--PSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECF 135 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~--~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~ 135 (515)
.++|||||||+||++||.+|++ .+++|||||+++++.|+|+++.+..|....+++..++++++++.+++ ++.++|+
T Consensus 2 ~K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~~~~~gv~--~i~~~v~ 79 (430)
T 3hyw_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIE--FINEKAE 79 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEE--EECSCEE
T ss_pred CCcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHHHHHCCcE--EEEeEEE
Confidence 4789999999999999999984 45899999999999999999999999999999999999999988855 7789999
Q ss_pred EEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCCCCCCCCccccccChhHHHHHHHHHHHHHHhcCCCCC
Q 010217 136 KIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNL 215 (515)
Q Consensus 136 ~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 215 (515)
.||+++++|+++++. ++.||+||||||+++. +++||..++.+.+++.+++.++++.+.+..
T Consensus 80 ~Id~~~~~V~~~~g~----------~i~YD~LViAtG~~~~-~~i~G~~e~~~~~~~~~~a~~~~~~l~~~~-------- 140 (430)
T 3hyw_A 80 SIDPDANTVTTQSGK----------KIEYDYLVIATGPKLV-FGAEGQEENSTSICTAEHALETQKKLQELY-------- 140 (430)
T ss_dssp EEETTTTEEEETTCC----------EEECSEEEECCCCEEE-CCSBTHHHHSCCCSSHHHHHHHHHHHHHHH--------
T ss_pred EEECCCCEEEECCCC----------EEECCEEEEeCCCCcc-CCccCcccCcCCcccHHHHHHHHHHHHhhc--------
Confidence 999999999987654 8999999999999864 579999888899999999999998876542
Q ss_pred CHHHHhccceEEEECCChhHHHHHHHHHHhh---HHHHHhhCcccCCCcEEEEEeccccccc---cccHHHHHHHHHHhh
Q 010217 216 SDEERKRILHFVIVGGGPTGVEFAAELHDFV---DEDLFKLYPKVKDSVKITLLEAADHILN---MFDKRITAFAEEKFS 289 (515)
Q Consensus 216 ~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~---~~~~~~~~p~~~~~~~Vtlv~~~~~~l~---~~~~~~~~~~~~~l~ 289 (515)
..+.++|+|++ .|+|++..+.++. ...+.+.. .+...+|++++..+.+.+ ...+...+.+++.++
T Consensus 141 ------~~~~~vv~gg~-~gve~~~~~~e~a~~~~~~l~~~g--~~~~v~v~~~~~~~~l~~~~~~~~~~~~~~l~~~l~ 211 (430)
T 3hyw_A 141 ------ANPGPVVIGAI-PGVSCFGPAYEFALMLHYELKKRG--IRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFA 211 (430)
T ss_dssp ------HSCCCEEEEEC-TTCCCCHHHHHHHHHHHHHHHHTT--CGGGCCEEEECSSSSTTCTTTTCSTTHHHHHHHHHH
T ss_pred ------cCCceEEEeCC-CcEEEhHHHHHHHHHHHHHHHHhc--ccccceeeeecccchhhhccchhhHHHHHHHHHHHH
Confidence 23355555554 3555544433322 11122221 223578999988776532 355677888999999
Q ss_pred cCCeEEEcCcEEEEEeCCeEEEEecCCCceEEEecCeEEEccCCCCccchHHHHHHhC--C--CCCCceeeCCCccccCC
Q 010217 290 RDGIDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVG--Q--TNRRALATDEWLRVEGS 365 (515)
Q Consensus 290 ~~gV~v~~~~~v~~i~~~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~~--~--~~~g~i~vd~~l~t~~~ 365 (515)
++||++++++.|++++++++.+.. .+|+..++++|+++|++|+ .|+ .++...+ + +.+|.|.||++||++++
T Consensus 212 ~~GV~~~~~~~v~~v~~~~~~~~~-~~g~~~~i~~d~vi~~~G~--~~~--~~~~~~~~~l~~~~~g~i~vd~~lq~t~~ 286 (430)
T 3hyw_A 212 ERNIDWIANVAVKAIEPDKVIYED-LNGNTHEVPAKFTMFMPSF--QGP--EVVASAGDKVANPANKMVIVNRCFQNPTY 286 (430)
T ss_dssp HTTCEEECSCEEEEECSSEEEEEC-TTSCEEEEECSEEEEECEE--ECC--HHHHTTCTTTBCTTTCCBCCCTTSBCSSS
T ss_pred hCCeEEEeCceEEEEeCCceEEEe-eCCCceEeecceEEEeccC--CCc--hHHHhcccccccCCceEEEecccccCCCC
Confidence 999999999999999999888775 4565557999999999996 443 3334443 3 34568999999997799
Q ss_pred CCEEEeccccccCc
Q 010217 366 DSIYALGDCATVNQ 379 (515)
Q Consensus 366 ~~IyA~GD~~~~~~ 379 (515)
|||||+|||+..+.
T Consensus 287 ~~IfAiGD~a~~p~ 300 (430)
T 3hyw_A 287 KNIFGVGVVTAIPP 300 (430)
T ss_dssp TTEEECSTTBCCCC
T ss_pred CCEEEeccEEecCC
Confidence 99999999999764
No 4
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=100.00 E-value=9.5e-41 Score=338.24 Aligned_cols=262 Identities=24% Similarity=0.363 Sum_probs=228.7
Q ss_pred CCCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCcc-CCccchhccCcccccccccchHHHHhhcCceEEEEEeEE
Q 010217 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAF-TPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAEC 134 (515)
Q Consensus 56 ~~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v 134 (515)
.+++||||||||+||++||..|...+++|+|||+++.++| .+.++.+..+....+++..+..+++.+.+++++ .+++|
T Consensus 7 ~~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~i~~~-~~~~V 85 (385)
T 3klj_A 7 HKSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKNNIKVI-TSEFA 85 (385)
T ss_dssp -CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHHTTCEEE-CSCCE
T ss_pred cCCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHHCCCEEE-eCCEE
Confidence 4578999999999999999999888999999999998877 467777777777777888888899999998863 46789
Q ss_pred EEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCCCCCCCCccccccChhHHHHHHHHHHHHHHhcCCCC
Q 010217 135 FKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPN 214 (515)
Q Consensus 135 ~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 214 (515)
+.||++.+.|++.++. ++.||+||||||++|+.|++||.+ +++.+++.+++.+++..+.
T Consensus 86 ~~id~~~~~v~~~~g~----------~~~yd~lvlAtG~~p~~p~i~G~~-~v~~~~~~~d~~~l~~~l~---------- 144 (385)
T 3klj_A 86 TSIDPNNKLVTLKSGE----------KIKYEKLIIASGSIANKIKVPHAD-EIFSLYSYDDALKIKDECK---------- 144 (385)
T ss_dssp EEEETTTTEEEETTSC----------EEECSEEEECCCEEECCCCCTTCS-CEECCSSHHHHHHHHHHHH----------
T ss_pred EEEECCCCEEEECCCC----------EEECCEEEEecCCCcCCCCCCCCC-CeEEeCCHHHHHHHHHHhh----------
Confidence 9999999999887644 899999999999999999999987 8888999999998887653
Q ss_pred CCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEecccccccc-ccHHHHHHHHHHhhcCCe
Q 010217 215 LSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM-FDKRITAFAEEKFSRDGI 293 (515)
Q Consensus 215 ~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~~-~~~~~~~~~~~~l~~~gV 293 (515)
.+++|+|||+|++|+|+|..|.++ +.+|+++++.+++++. +++.+.+.+.+.+++.||
T Consensus 145 -------~~~~vvVIGgG~~g~E~A~~l~~~--------------g~~Vtvv~~~~~~l~~~~~~~~~~~~~~~l~~~gV 203 (385)
T 3klj_A 145 -------NKGKAFIIGGGILGIELAQAIIDS--------------GTPASIGIILEYPLERQLDRDGGLFLKDKLDRLGI 203 (385)
T ss_dssp -------HHSCEEEECCSHHHHHHHHHHHHH--------------TCCEEEECSSSSSCTTTSCHHHHHHHHHHHHTTTC
T ss_pred -------cCCeEEEECCCHHHHHHHHHHHhC--------------CCeEEEEEcCCccchhhcCHHHHHHHHHHHHhCCC
Confidence 457999999999999999999986 6899999999999986 899999999999999999
Q ss_pred EEEcCcEEEEEeCCeEEEEecCCCceEEEecCeEEEccCCCCccchHHHHHHhCCCCCCceeeCCCccccCCCCEEEecc
Q 010217 294 DVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQTNRRALATDEWLRVEGSDSIYALGD 373 (515)
Q Consensus 294 ~v~~~~~v~~i~~~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~~~~~~g~i~vd~~l~t~~~~~IyA~GD 373 (515)
++++++.++++ |++ ++||.||+|+| ..|++ .+++.+++..+++|.||+++|| +.|+|||+||
T Consensus 204 ~~~~~~~v~~i------------g~~--~~~D~vv~a~G--~~p~~-~~~~~~gl~~~~gi~vd~~~~t-~~~~IyA~GD 265 (385)
T 3klj_A 204 KIYTNSNFEEM------------GDL--IRSSCVITAVG--VKPNL-DFIKDTEIASKRGILVNDHMET-SIKDIYACGD 265 (385)
T ss_dssp EEECSCCGGGC------------HHH--HHHSEEEECCC--EEECC-GGGTTSCCCBSSSEEECTTCBC-SSTTEEECGG
T ss_pred EEEeCCEEEEc------------CeE--EecCeEEECcC--cccCh-hhhhhcCCCcCCCEEECCCccc-CCCCEEEEEe
Confidence 99999887665 443 89999999999 57887 6778888844455999999998 9999999999
Q ss_pred ccccC
Q 010217 374 CATVN 378 (515)
Q Consensus 374 ~~~~~ 378 (515)
|+..+
T Consensus 266 ~a~~~ 270 (385)
T 3klj_A 266 VAEFY 270 (385)
T ss_dssp GEEET
T ss_pred eEecC
Confidence 99854
No 5
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=4.2e-39 Score=324.54 Aligned_cols=280 Identities=24% Similarity=0.388 Sum_probs=228.7
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccC-CccchhccCcccccccccchHHHHhhcCceEEEEEeEEEE
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFT-PLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~ 136 (515)
..+|||||||+||++||..|++.| +|+|||+++...+. ++++....+....+++..+..+++++.++++ +...+|+.
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~v~~-~~g~~v~~ 85 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSLDWYRKRGIEI-RLAEEAKL 85 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCCCCSTTHHHHHTTSSCGGGGCSSCHHHHHHHTEEE-ECSCCEEE
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCccccchhHHHHhCCCCHHHhccCCHHHHHhCCcEE-EECCEEEE
Confidence 579999999999999999999999 99999999876654 5666666666666677777788888888765 23447999
Q ss_pred EecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCCCCCCCCccccccChhHHHHHHHHHHHHHHhcCCCCCC
Q 010217 137 IDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLS 216 (515)
Q Consensus 137 id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 216 (515)
+|+..+.|. .++. ++.||+||||||++|+.|++|| .++++.+++.+++.++++.+.
T Consensus 86 id~~~~~V~-~~g~----------~~~~d~lViATGs~p~~p~i~G-~~~v~~~~~~~~~~~l~~~~~------------ 141 (367)
T 1xhc_A 86 IDRGRKVVI-TEKG----------EVPYDTLVLATGARAREPQIKG-KEYLLTLRTIFDADRIKESIE------------ 141 (367)
T ss_dssp EETTTTEEE-ESSC----------EEECSEEEECCCEEECCCCSBT-GGGEECCCSHHHHHHHHHHHH------------
T ss_pred EECCCCEEE-ECCc----------EEECCEEEECCCCCCCCCCCCC-cCCEEEEcCHHHHHHHHHHhh------------
Confidence 999888887 4432 7999999999999999999999 466777888888888776542
Q ss_pred HHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccccccccHHHHHHHHHHhhcCCeEEE
Q 010217 217 DEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVK 296 (515)
Q Consensus 217 ~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~ 296 (515)
++++++|||+|++|+|+|..|.++ +.+|+++++.+++++ +++++.+.+.+.+++.||+++
T Consensus 142 -----~~~~vvViGgG~~g~E~A~~l~~~--------------g~~Vtlv~~~~~~l~-~~~~~~~~l~~~l~~~gV~i~ 201 (367)
T 1xhc_A 142 -----NSGEAIIIGGGFIGLELAGNLAEA--------------GYHVKLIHRGAMFLG-LDEELSNMIKDMLEETGVKFF 201 (367)
T ss_dssp -----HHSEEEEEECSHHHHHHHHHHHHT--------------TCEEEEECSSSCCTT-CCHHHHHHHHHHHHHTTEEEE
T ss_pred -----cCCcEEEECCCHHHHHHHHHHHhC--------------CCEEEEEeCCCeecc-CCHHHHHHHHHHHHHCCCEEE
Confidence 346999999999999999999986 689999999999999 999999999999999999999
Q ss_pred cCcEEEEEeCCeEEEEecCCCceEEEecCeEEEccCCCCccchHHHHHHhCCCCCCceeeCCCccccCCCCEEEeccccc
Q 010217 297 LGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQTNRRALATDEWLRVEGSDSIYALGDCAT 376 (515)
Q Consensus 297 ~~~~v~~i~~~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~~~~~~g~i~vd~~l~t~~~~~IyA~GD~~~ 376 (515)
++++|++++.+.+.+ .+|+ +++|.||+|+| ..|++ .+++.+++..+++|.||+++|| +.|+|||+|||+.
T Consensus 202 ~~~~v~~i~~~~v~~---~~g~---i~~D~vi~a~G--~~p~~-~ll~~~gl~~~~gi~Vd~~~~t-~~~~IyA~GD~a~ 271 (367)
T 1xhc_A 202 LNSELLEANEEGVLT---NSGF---IEGKVKICAIG--IVPNV-DLARRSGIHTGRGILIDDNFRT-SAKDVYAIGDCAE 271 (367)
T ss_dssp CSCCEEEECSSEEEE---TTEE---EECSCEEEECC--EEECC-HHHHHTTCCBSSSEECCTTSBC-SSTTEEECGGGEE
T ss_pred cCCEEEEEEeeEEEE---CCCE---EEcCEEEECcC--CCcCH-HHHHhCCCCCCCCEEECCCccc-CCCCEEEeEeeee
Confidence 999999998665443 3554 89999999999 57888 4788888843455999999998 9999999999987
Q ss_pred cCc---cchHHHHHHHHHhh
Q 010217 377 VNQ---RRVMEDIAAIFSKA 393 (515)
Q Consensus 377 ~~~---~~~~~~~~~~~~~a 393 (515)
... .....+..++..++
T Consensus 272 ~~~~~~~~~~~A~~qg~~aa 291 (367)
T 1xhc_A 272 YSGIIAGTAKAAMEQARVLA 291 (367)
T ss_dssp BTTBCCCSHHHHHHHHHHHH
T ss_pred cCCCCccHHHHHHHHHHHHH
Confidence 532 23344444444433
No 6
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=100.00 E-value=9.1e-39 Score=327.33 Aligned_cols=273 Identities=22% Similarity=0.374 Sum_probs=228.4
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCe--EEEEcCCCCCccC--CccchhccCcccccccccchHHHHhhcCceEEEEEeE
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYD--VQVISPRNYFAFT--PLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAE 133 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~--V~vie~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~ 133 (515)
+++|||||||+||++||..|++.|++ |+|||+++.++|. ++...+..+......+ ....+++.+.++++. ..++
T Consensus 2 ~~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~~~l~~~~~~g~~~~~~~-~~~~~~~~~~~i~~~-~~~~ 79 (410)
T 3ef6_A 2 ATHVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRPSLSKAVLDGSLERPPI-LAEADWYGEARIDML-TGPE 79 (410)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCSGGGGTHHHHTSSSSCCB-SSCTTHHHHTTCEEE-ESCC
T ss_pred CCCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCCccccHHHhCCCCCHHHh-cCCHHHHHHCCCEEE-eCCE
Confidence 46999999999999999999988887 9999999988775 3444456666666666 556677888898863 4558
Q ss_pred EEEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCCCCCCC-CccccccChhHHHHHHHHHHHHHHhcCC
Q 010217 134 CFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVE-ENCNFLKEVEDAQRIRRNVIESFEKASL 212 (515)
Q Consensus 134 v~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ipG~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 212 (515)
|+.+++..+.|.+.++. ++.||+||||||+.|+.|++||.+ ++++.+++.+++..++..+
T Consensus 80 v~~id~~~~~v~~~~g~----------~~~~d~lvlAtG~~p~~~~ipG~~~~~v~~~~~~~d~~~l~~~~--------- 140 (410)
T 3ef6_A 80 VTALDVQTRTISLDDGT----------TLSADAIVIATGSRARTMALPGSQLPGVVTLRTYGDVQVLRDSW--------- 140 (410)
T ss_dssp EEEEETTTTEEEETTSC----------EEECSEEEECCCEEECCCCCTTTTSTTEECCCSHHHHHHHHHHC---------
T ss_pred EEEEECCCCEEEECCCC----------EEECCEEEEccCCcccCCCCCCccccceEEeccHHHHHHHHHHh---------
Confidence 99999999999887543 799999999999999999999986 6778888999988876643
Q ss_pred CCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEecccccccc-ccHHHHHHHHHHhhcC
Q 010217 213 PNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM-FDKRITAFAEEKFSRD 291 (515)
Q Consensus 213 ~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~~-~~~~~~~~~~~~l~~~ 291 (515)
..+++++|||+|++|+|+|..+.++ +.+|+++++.+++++. +++.+.+.+.+.+++.
T Consensus 141 --------~~~~~vvViGgG~~g~E~A~~l~~~--------------g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~ 198 (410)
T 3ef6_A 141 --------TSATRLLIVGGGLIGCEVATTARKL--------------GLSVTILEAGDELLVRVLGRRIGAWLRGLLTEL 198 (410)
T ss_dssp --------CTTCEEEEECCSHHHHHHHHHHHHT--------------TCEEEEECSSSSSSHHHHCHHHHHHHHHHHHHH
T ss_pred --------ccCCeEEEECCCHHHHHHHHHHHhC--------------CCeEEEEecCCccchhhcCHHHHHHHHHHHHHC
Confidence 2467999999999999999999885 6899999999998875 8899999999999999
Q ss_pred CeEEEcCcEEEEEeCC-eEEEEecCCCceEEEecCeEEEccCCCCccchHHHHHHhCCCCCCceeeCCCccccCCCCEEE
Q 010217 292 GIDVKLGSMVVKVTDK-EIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQTNRRALATDEWLRVEGSDSIYA 370 (515)
Q Consensus 292 gV~v~~~~~v~~i~~~-~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~~~~~~g~i~vd~~l~t~~~~~IyA 370 (515)
||++++++.|++++.+ .+..+.+.+|++ ++||.||+|+| ..|++ .+++.+++..+++|.||++++| +.|+|||
T Consensus 199 GV~i~~~~~v~~i~~~~~~~~v~~~dg~~--i~aD~Vv~a~G--~~p~~-~l~~~~gl~~~~gi~vd~~~~t-~~~~IyA 272 (410)
T 3ef6_A 199 GVQVELGTGVVGFSGEGQLEQVMASDGRS--FVADSALICVG--AEPAD-QLARQAGLACDRGVIVDHCGAT-LAKGVFA 272 (410)
T ss_dssp TCEEECSCCEEEEECSSSCCEEEETTSCE--EECSEEEECSC--EEECC-HHHHHTTCCBSSSEECCTTSBC-SSTTEEE
T ss_pred CCEEEeCCEEEEEeccCcEEEEEECCCCE--EEcCEEEEeeC--CeecH-HHHHhCCCccCCeEEEccCeeE-CCCCEEE
Confidence 9999999999999864 332333467874 99999999999 57887 6788888844466999999998 9999999
Q ss_pred eccccccCc
Q 010217 371 LGDCATVNQ 379 (515)
Q Consensus 371 ~GD~~~~~~ 379 (515)
+|||+..+.
T Consensus 273 ~GD~a~~~~ 281 (410)
T 3ef6_A 273 VGDVASWPL 281 (410)
T ss_dssp CGGGEEEEB
T ss_pred EEcceeccC
Confidence 999998654
No 7
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=6.8e-38 Score=321.61 Aligned_cols=275 Identities=23% Similarity=0.390 Sum_probs=232.5
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCe--EEEEcCCCCCccC--CccchhccCcccccccccchHHHHhhcCceEEEEEe
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYD--VQVISPRNYFAFT--PLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEA 132 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~--V~vie~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~ 132 (515)
++++|||||||+||++||.+|++.|++ |+|||+++.+.|. ++...+..+......+......++.+.++++ ....
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~ 86 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERPPLSKEYLAREKTFERICIRPAQFWEDKAVEM-KLGA 86 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSGGGGTTTTTTSSCSGGGBSSCHHHHHHTTEEE-EETC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCcccCCHHHHcCCCCHHHhccCCHHHHHHCCcEE-EeCC
Confidence 468999999999999999999998887 9999999887775 3443555565556667677788888898775 2345
Q ss_pred EEEEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCCCCCCC-CccccccChhHHHHHHHHHHHHHHhcC
Q 010217 133 ECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVE-ENCNFLKEVEDAQRIRRNVIESFEKAS 211 (515)
Q Consensus 133 ~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ipG~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~ 211 (515)
+|+.+++..+.|.+.++. .+.||+||||||+.|+.|++||.+ .+++++++.+++..++..+.
T Consensus 87 ~v~~id~~~~~v~~~~g~----------~~~~d~lvlAtG~~~~~~~i~g~~~~~v~~~~~~~d~~~l~~~~~------- 149 (415)
T 3lxd_A 87 EVVSLDPAAHTVKLGDGS----------AIEYGKLIWATGGDPRRLSCVGADLAGVHAVRTKEDADRLMAELD------- 149 (415)
T ss_dssp CEEEEETTTTEEEETTSC----------EEEEEEEEECCCEECCCCBTTSSCCBTEECCCSHHHHHHHHHHHH-------
T ss_pred EEEEEECCCCEEEECCCC----------EEEeeEEEEccCCccCCCCCCCccccCEEEEcCHHHHHHHHHHhh-------
Confidence 899999999999887543 899999999999999999999986 67788889999888876652
Q ss_pred CCCCCHHHHhc-cceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEecccccccc-ccHHHHHHHHHHhh
Q 010217 212 LPNLSDEERKR-ILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM-FDKRITAFAEEKFS 289 (515)
Q Consensus 212 ~~~~~~~~~~~-~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~~-~~~~~~~~~~~~l~ 289 (515)
. +++++|||+|++|+|+|..+..+ +.+|+++++.+++++. +++.+.+.+.+.++
T Consensus 150 ----------~~~~~vvViGgG~~g~e~A~~l~~~--------------g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~ 205 (415)
T 3lxd_A 150 ----------AGAKNAVVIGGGYIGLEAAAVLTKF--------------GVNVTLLEALPRVLARVAGEALSEFYQAEHR 205 (415)
T ss_dssp ----------TTCCEEEEECCSHHHHHHHHHHHHT--------------TCEEEEEESSSSTTTTTSCHHHHHHHHHHHH
T ss_pred ----------hcCCeEEEECCCHHHHHHHHHHHhc--------------CCeEEEEecCCchhhhhcCHHHHHHHHHHHH
Confidence 3 67999999999999999999986 6899999999999885 78999999999999
Q ss_pred cCCeEEEcCcEEEEEeCC--eEEEEecCCCceEEEecCeEEEccCCCCccchHHHHHHhCCCCCCceeeCCCccccCCCC
Q 010217 290 RDGIDVKLGSMVVKVTDK--EIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQTNRRALATDEWLRVEGSDS 367 (515)
Q Consensus 290 ~~gV~v~~~~~v~~i~~~--~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~~~~~~g~i~vd~~l~t~~~~~ 367 (515)
+.||++++++.|++++.+ .+..+.+.+|+. ++||.||+|+| ..|++ .+++.+++..+++|.||++++| +.|+
T Consensus 206 ~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~--i~aD~Vv~a~G--~~p~~-~l~~~~gl~~~~gi~vd~~~~t-~~~~ 279 (415)
T 3lxd_A 206 AHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSV--IPADIVIVGIG--IVPCV-GALISAGASGGNGVDVDEFCRT-SLTD 279 (415)
T ss_dssp HTTCEEEETCCEEEEEESSSBEEEEEESSSCE--EECSEEEECSC--CEESC-HHHHHTTCCCSSSEECCTTCBC-SSTT
T ss_pred hCCCEEEECCEEEEEEecCCcEEEEEeCCCCE--EEcCEEEECCC--CccCh-HHHHhCCCCcCCCEEECCCCCc-CCCC
Confidence 999999999999999753 455555577874 99999999999 57887 6788888844455999999998 9999
Q ss_pred EEEeccccccCc
Q 010217 368 IYALGDCATVNQ 379 (515)
Q Consensus 368 IyA~GD~~~~~~ 379 (515)
|||+|||+..+.
T Consensus 280 iyA~GD~a~~~~ 291 (415)
T 3lxd_A 280 VYAIGDCAAHAN 291 (415)
T ss_dssp EEECGGGEEEEC
T ss_pred EEEEEeeeeecC
Confidence 999999998765
No 8
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=100.00 E-value=7.4e-38 Score=320.12 Aligned_cols=273 Identities=21% Similarity=0.423 Sum_probs=230.8
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCC--eEEEEcCCCCCccC--CccchhccCcccccccccchHHHHhhcCceEEEEEeE
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSY--DVQVISPRNYFAFT--PLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAE 133 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~--~V~vie~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~ 133 (515)
+++|||||||+||++||.+|++.|+ +|+|||+++.+.|. ++...+..+.....++......++.+.++++. .++
T Consensus 1 ~k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~--~~~ 78 (404)
T 3fg2_P 1 NDTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRPPLSKAYLKSGGDPNSLMFRPEKFFQDQAIELI--SDR 78 (404)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSGGGGTGGGGSCCCTTSSBSSCHHHHHHTTEEEE--CCC
T ss_pred CCCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCccCCHHHHCCCCCHHHccCCCHHHHHhCCCEEE--EEE
Confidence 3689999999999999999999888 89999999877774 34435556665666777777888888987753 389
Q ss_pred EEEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCCCCCCC-CccccccChhHHHHHHHHHHHHHHhcCC
Q 010217 134 CFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVE-ENCNFLKEVEDAQRIRRNVIESFEKASL 212 (515)
Q Consensus 134 v~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ipG~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 212 (515)
|+.+++..+.|.+.++. .+.||+||+|||+.|+.|++||.+ .+++++++.+++..++..+
T Consensus 79 v~~id~~~~~v~~~~g~----------~~~~d~lvlAtG~~p~~~~i~g~~~~~v~~~~~~~d~~~l~~~~--------- 139 (404)
T 3fg2_P 79 MVSIDREGRKLLLASGT----------AIEYGHLVLATGARNRMLDVPNASLPDVLYLRTLDESEVLRQRM--------- 139 (404)
T ss_dssp EEEEETTTTEEEESSSC----------EEECSEEEECCCEEECCCCSTTTTSTTEECCSSHHHHHHHHHHG---------
T ss_pred EEEEECCCCEEEECCCC----------EEECCEEEEeeCCCccCCCCCCCCCCcEEEECCHHHHHHHHHHh---------
Confidence 99999999999887644 899999999999999999999976 6778888998888776654
Q ss_pred CCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEecccccccc-ccHHHHHHHHHHhhcC
Q 010217 213 PNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM-FDKRITAFAEEKFSRD 291 (515)
Q Consensus 213 ~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~~-~~~~~~~~~~~~l~~~ 291 (515)
..+++++|||+|++|+|+|..+.++ +.+|+++++.+++++. +++.+.+.+.+.+++.
T Consensus 140 --------~~~~~vvViGgG~~g~e~A~~l~~~--------------g~~Vtvv~~~~~~~~~~~~~~~~~~l~~~l~~~ 197 (404)
T 3fg2_P 140 --------PDKKHVVVIGAGFIGLEFAATARAK--------------GLEVDVVELAPRVMARVVTPEISSYFHDRHSGA 197 (404)
T ss_dssp --------GGCSEEEEECCSHHHHHHHHHHHHT--------------TCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHT
T ss_pred --------hcCCeEEEECCCHHHHHHHHHHHhC--------------CCEEEEEeCCCcchhhccCHHHHHHHHHHHHhC
Confidence 2567999999999999999999885 6899999999999875 7899999999999999
Q ss_pred CeEEEcCcEEEEEeC--CeEEEEecCCCceEEEecCeEEEccCCCCccchHHHHHHhCCCCCCceeeCCCccccCCCCEE
Q 010217 292 GIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQTNRRALATDEWLRVEGSDSIY 369 (515)
Q Consensus 292 gV~v~~~~~v~~i~~--~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~~~~~~g~i~vd~~l~t~~~~~Iy 369 (515)
||++++++.|++++. +.+..+.+.+|++ ++||.||+|+| ..|++ .+++.+++..+++|.||++++| +.|+||
T Consensus 198 GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~--i~aD~Vv~a~G--~~p~~-~l~~~~gl~~~~Gi~vd~~~~t-~~~~iy 271 (404)
T 3fg2_P 198 GIRMHYGVRATEIAAEGDRVTGVVLSDGNT--LPCDLVVVGVG--VIPNV-EIAAAAGLPTAAGIIVDQQLLT-SDPHIS 271 (404)
T ss_dssp TCEEECSCCEEEEEEETTEEEEEEETTSCE--EECSEEEECCC--EEECC-HHHHHTTCCBSSSEEECTTSBC-SSTTEE
T ss_pred CcEEEECCEEEEEEecCCcEEEEEeCCCCE--EEcCEEEECcC--CccCH-HHHHhCCCCCCCCEEECCCccc-CCCCEE
Confidence 999999999999974 3555555677874 99999999999 57877 6788888843345999999998 999999
Q ss_pred EeccccccCc
Q 010217 370 ALGDCATVNQ 379 (515)
Q Consensus 370 A~GD~~~~~~ 379 (515)
|+|||+..+.
T Consensus 272 a~GD~a~~~~ 281 (404)
T 3fg2_P 272 AIGDCALFES 281 (404)
T ss_dssp ECGGGEEEEE
T ss_pred EeecceeecC
Confidence 9999998754
No 9
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=100.00 E-value=5.4e-37 Score=318.39 Aligned_cols=276 Identities=22% Similarity=0.379 Sum_probs=223.7
Q ss_pred CeEEEECCcHHHHHHHHhccCC--CCeEEEEcCCCCCccCC-ccchhccCcc---cccccccchHHHHhhcCceEEEEEe
Q 010217 59 KKVVVLGTGWAGTSFLKNLNNP--SYDVQVISPRNYFAFTP-LLPSVTCGTV---EARSIVEPVRNIVRKKNVDICFWEA 132 (515)
Q Consensus 59 ~~VvIIGgG~AGlsaA~~L~~~--g~~V~vie~~~~~~~~~-~~~~~~~g~~---~~~~~~~~~~~~~~~~~i~v~~~~~ 132 (515)
+||+|||||+||++||..|++. |++|+|||+++.+++.+ .++.+..+.. .+.++...+...+.+.++++ +...
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~gv~~-~~~~ 79 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSCGIALYLGKEIKNNDPRGLFYSSPEELSNLGANV-QMRH 79 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGGGHHHHHTTCBGGGCGGGGBSCCHHHHHHTTCEE-EESE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcccccchhhhcCCcccCCHHHhhhcCHHHHHHcCCEE-EeCC
Confidence 5899999999999999999976 99999999998766654 2333333433 34556666677888889886 3577
Q ss_pred EEEEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCCCCCCC-CccccccChhHHHHHHHHHHHHHHhcC
Q 010217 133 ECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVE-ENCNFLKEVEDAQRIRRNVIESFEKAS 211 (515)
Q Consensus 133 ~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ipG~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~ 211 (515)
++..++.+.+.|.+.+.. +++...+.||+||||||++|+.|++||.+ ++++++++++++..+....
T Consensus 80 ~v~~i~~~~~~v~v~~~~-----~g~~~~~~~d~lviAtGs~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~-------- 146 (452)
T 2cdu_A 80 QVTNVDPETKTIKVKDLI-----TNEEKTEAYDKLIMTTGSKPTVPPIPGIDSSRVYLCKNYNDAKKLFEEA-------- 146 (452)
T ss_dssp EEEEEEGGGTEEEEEETT-----TCCEEEEECSEEEECCCEEECCCCCTTTTSTTEEECSSHHHHHHHHHHG--------
T ss_pred EEEEEEcCCCEEEEEecC-----CCceEEEECCEEEEccCCCcCCCCCCCCCCCCEEEeCcHHHHHHHHHHh--------
Confidence 899999888888887522 12234799999999999999999999986 5677888888887776543
Q ss_pred CCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccccc-cccHHHHHHHHHHhhc
Q 010217 212 LPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN-MFDKRITAFAEEKFSR 290 (515)
Q Consensus 212 ~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~-~~~~~~~~~~~~~l~~ 290 (515)
..+++++|||+|++|+|+|..+.++ +.+|+++++.+++++ .+++++.+.+.+.+++
T Consensus 147 ---------~~~~~vvViGgG~~g~E~A~~l~~~--------------g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~ 203 (452)
T 2cdu_A 147 ---------PKAKTITIIGSGYIGAELAEAYSNQ--------------NYNVNLIDGHERVLYKYFDKEFTDILAKDYEA 203 (452)
T ss_dssp ---------GGCSEEEEECCSHHHHHHHHHHHTT--------------TCEEEEEESSSSTTTTTSCHHHHHHHHHHHHH
T ss_pred ---------ccCCeEEEECcCHHHHHHHHHHHhc--------------CCEEEEEEcCCchhhhhhhhhHHHHHHHHHHH
Confidence 2567999999999999999999875 689999999999998 6999999999999999
Q ss_pred CCeEEEcCcEEEEEeC--CeEEEEecCCCceEEEecCeEEEccCCCCccchHHHHHHh-CCCCCCceeeCCCccccCCCC
Q 010217 291 DGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQV-GQTNRRALATDEWLRVEGSDS 367 (515)
Q Consensus 291 ~gV~v~~~~~v~~i~~--~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~-~~~~~g~i~vd~~l~t~~~~~ 367 (515)
.||+++++++|++++. +.+..+.. +|+ ++++|.||+|+| ..|++ .+++.. .++.+|+|.||+++|| +.|+
T Consensus 204 ~Gv~i~~~~~v~~i~~~~~~v~~v~~-~g~--~i~~D~vv~a~G--~~p~~-~ll~~~l~~~~~G~i~Vd~~~~t-~~~~ 276 (452)
T 2cdu_A 204 HGVNLVLGSKVAAFEEVDDEIITKTL-DGK--EIKSDIAILCIG--FRPNT-ELLKGKVAMLDNGAIITDEYMHS-SNRD 276 (452)
T ss_dssp TTCEEEESSCEEEEEEETTEEEEEET-TSC--EEEESEEEECCC--EEECC-GGGTTTSCBCTTSCBCCCTTSBC-SSTT
T ss_pred CCCEEEcCCeeEEEEcCCCeEEEEEe-CCC--EEECCEEEECcC--CCCCH-HHHHHhhhcCCCCCEEECCCcCc-CCCC
Confidence 9999999999999975 44554443 565 499999999999 57887 455555 2257899999999998 9999
Q ss_pred EEEeccccccC
Q 010217 368 IYALGDCATVN 378 (515)
Q Consensus 368 IyA~GD~~~~~ 378 (515)
|||+|||+..+
T Consensus 277 IyA~GD~~~~~ 287 (452)
T 2cdu_A 277 IFAAGDSAAVH 287 (452)
T ss_dssp EEECSTTBCEE
T ss_pred EEEcceEEEec
Confidence 99999999853
No 10
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=100.00 E-value=1.1e-37 Score=319.01 Aligned_cols=268 Identities=25% Similarity=0.382 Sum_probs=213.7
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCC--eEEEEcCCCCCccC-Ccc-chhccCcccccccccchHHHHhhcCceEEEEEe
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSY--DVQVISPRNYFAFT-PLL-PSVTCGTVEARSIVEPVRNIVRKKNVDICFWEA 132 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~--~V~vie~~~~~~~~-~~~-~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~ 132 (515)
++++|+|||||+||++||..|++.|+ +|+|||+++.+.|. +.+ ..+..+.. .+.+. ++ ++.+.++++ +...
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~-~~~~~~v~~-~~~~ 80 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPPLSKDFMAHGD-AEKIR--LD-CKRAPEVEW-LLGV 80 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCBCSGGGGTHHHHHCC-GGGSB--CC-CTTSCSCEE-EETC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCcccCCCCCHHHhCCCc-hhhhh--HH-HHHHCCCEE-EcCC
Confidence 46899999999999999999998887 49999999876654 222 22332222 22211 11 456677775 2345
Q ss_pred EEEEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCCC-CCCCCccccccChhHHHHHHHHHHHHHHhcC
Q 010217 133 ECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNT-PGVEENCNFLKEVEDAQRIRRNVIESFEKAS 211 (515)
Q Consensus 133 ~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~i-pG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 211 (515)
+|+.+++..+.|.+.++. .+.||+||||||++|+.|++ ||.+++++++++.+++.+++..+
T Consensus 81 ~v~~i~~~~~~v~~~~g~----------~~~~d~lviAtG~~~~~~~i~~G~~~~v~~~~~~~~~~~l~~~~-------- 142 (408)
T 2gqw_A 81 TAQSFDPQAHTVALSDGR----------TLPYGTLVLATGAAPRALPTLQGATMPVHTLRTLEDARRIQAGL-------- 142 (408)
T ss_dssp CEEEEETTTTEEEETTSC----------EEECSEEEECCCEEECCCGGGTTCSSCEEECCSHHHHHHHHTTC--------
T ss_pred EEEEEECCCCEEEECCCC----------EEECCEEEECCCCCCCCCCccCCCCCcEEEECCHHHHHHHHHHh--------
Confidence 699999988888886533 79999999999999999999 99876777788888887765432
Q ss_pred CCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEecccccccc-ccHHHHHHHHHHhhc
Q 010217 212 LPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM-FDKRITAFAEEKFSR 290 (515)
Q Consensus 212 ~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~~-~~~~~~~~~~~~l~~ 290 (515)
..+++|+|||+|++|+|+|..|.++ +.+|+++++.+++++. +++++.+.+.+.+++
T Consensus 143 ---------~~~~~vvViGgG~~g~E~A~~l~~~--------------g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~ 199 (408)
T 2gqw_A 143 ---------RPQSRLLIVGGGVIGLELAATARTA--------------GVHVSLVETQPRLMSRAAPATLADFVARYHAA 199 (408)
T ss_dssp ---------CTTCEEEEECCSHHHHHHHHHHHHT--------------TCEEEEEESSSSSSTTTSCHHHHHHHHHHHHH
T ss_pred ---------hcCCeEEEECCCHHHHHHHHHHHhC--------------CCEEEEEEeCCcccccccCHHHHHHHHHHHHH
Confidence 1457999999999999999999886 6899999999999985 899999999999999
Q ss_pred CCeEEEcCcEEEEEeCCeEEEEecCCCceEEEecCeEEEccCCCCccchHHHHHHhCCCCCCceeeCCCccccCCCCEEE
Q 010217 291 DGIDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQTNRRALATDEWLRVEGSDSIYA 370 (515)
Q Consensus 291 ~gV~v~~~~~v~~i~~~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~~~~~~g~i~vd~~l~t~~~~~IyA 370 (515)
.||++++++.|++++++.+ . +.+|++ ++||.||+|+| ..|++ .+++.+++..+++|.||+++|| +.|+|||
T Consensus 200 ~GV~i~~~~~v~~i~~~~v--~-~~~g~~--i~~D~vi~a~G--~~p~~-~l~~~~gl~~~~gi~Vd~~~~t-~~~~IyA 270 (408)
T 2gqw_A 200 QGVDLRFERSVTGSVDGVV--L-LDDGTR--IAADMVVVGIG--VLAND-ALARAAGLACDDGIFVDAYGRT-TCPDVYA 270 (408)
T ss_dssp TTCEEEESCCEEEEETTEE--E-ETTSCE--EECSEEEECSC--EEECC-HHHHHHTCCBSSSEECCTTCBC-SSTTEEE
T ss_pred cCcEEEeCCEEEEEECCEE--E-ECCCCE--EEcCEEEECcC--CCccH-HHHHhCCCCCCCCEEECCCCcc-CCCCEEE
Confidence 9999999999999984422 2 356764 99999999999 57887 5788888832344999999998 9999999
Q ss_pred eccccccCc
Q 010217 371 LGDCATVNQ 379 (515)
Q Consensus 371 ~GD~~~~~~ 379 (515)
+|||+..+.
T Consensus 271 ~GD~~~~~~ 279 (408)
T 2gqw_A 271 LGDVTRQRN 279 (408)
T ss_dssp CGGGEEEEE
T ss_pred EEEEEEecC
Confidence 999998753
No 11
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=100.00 E-value=9.4e-37 Score=325.68 Aligned_cols=277 Identities=23% Similarity=0.419 Sum_probs=227.0
Q ss_pred CeEEEECCcHHHHHHHHhccCC--CCeEEEEcCCCCCccCC-ccchhccCccc-ccc-cccchHHHHhhcCceEEEEEeE
Q 010217 59 KKVVVLGTGWAGTSFLKNLNNP--SYDVQVISPRNYFAFTP-LLPSVTCGTVE-ARS-IVEPVRNIVRKKNVDICFWEAE 133 (515)
Q Consensus 59 ~~VvIIGgG~AGlsaA~~L~~~--g~~V~vie~~~~~~~~~-~~~~~~~g~~~-~~~-~~~~~~~~~~~~~i~v~~~~~~ 133 (515)
++|+|||||+||++||..|++. +++|+|||+++.++|.+ .++....+... ... +......+.++.+++++ .+++
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~ 80 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFANCGLPYHISGEIAQRSALVLQTPESFKARFNVEVR-VKHE 80 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTSSSCCGGGGBCCCHHHHHHHHCCEEE-TTEE
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccccccCchHHhcCCcCChHHhhccCHHHHHHhcCcEEE-ECCE
Confidence 6999999999999999999965 89999999999988764 45555555433 222 44445555666888763 5789
Q ss_pred EEEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCCCCCCC-CccccccChhHHHHHHHHHHHHHHhcCC
Q 010217 134 CFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVE-ENCNFLKEVEDAQRIRRNVIESFEKASL 212 (515)
Q Consensus 134 v~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ipG~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 212 (515)
|+.+++..+.+.+.+.. +++..++.||+||||||++|+.|++||.+ ..++.+++..++..+...+..
T Consensus 81 V~~id~~~~~v~~~~~~-----~g~~~~~~~d~lviAtG~~p~~p~ipG~~~~~v~~~~~~~~~~~l~~~~~~------- 148 (565)
T 3ntd_A 81 VVAIDRAAKLVTVRRLL-----DGSEYQESYDTLLLSPGAAPIVPPIPGVDNPLTHSLRNIPDMDRILQTIQM------- 148 (565)
T ss_dssp EEEEETTTTEEEEEETT-----TCCEEEEECSEEEECCCEEECCCCCTTCCSTTEECCSSHHHHHHHHHHHHH-------
T ss_pred EEEEECCCCEEEEEecC-----CCCeEEEECCEEEECCCCCCCCCCCCCCCCCCEEEeCCHHHHHHHHHHHhh-------
Confidence 99999999999887632 23345799999999999999999999985 567778888888777665431
Q ss_pred CCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccccccccHHHHHHHHHHhhcCC
Q 010217 213 PNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDG 292 (515)
Q Consensus 213 ~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~g 292 (515)
..+++++|||+|++|+|+|..|.++ +.+|+++++.+++++.+++++.+.+.+.+++.|
T Consensus 149 --------~~~~~vvViGgG~~g~e~A~~l~~~--------------g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~G 206 (565)
T 3ntd_A 149 --------NNVEHATVVGGGFIGLEMMESLHHL--------------GIKTTLLELADQVMTPVDREMAGFAHQAIRDQG 206 (565)
T ss_dssp --------TTCSEEEEECCSHHHHHHHHHHHHT--------------TCEEEEEESSSSSCTTSCHHHHHHHHHHHHHTT
T ss_pred --------CCCCEEEEECCCHHHHHHHHHHHhc--------------CCcEEEEEcCCccchhcCHHHHHHHHHHHHHCC
Confidence 2567999999999999999999986 689999999999999999999999999999999
Q ss_pred eEEEcCcEEEEEeC---------------------CeEEEEecCCCceEEEecCeEEEccCCCCccchHHHHHHhCC--C
Q 010217 293 IDVKLGSMVVKVTD---------------------KEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ--T 349 (515)
Q Consensus 293 V~v~~~~~v~~i~~---------------------~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~~~--~ 349 (515)
|++++++.+++++. +.+.+.. .+|+ +++||.||+|+| ..|++ .+++.+++ +
T Consensus 207 V~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~g~--~i~~D~vi~a~G--~~p~~-~l~~~~g~~~~ 280 (565)
T 3ntd_A 207 VDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTL-SNGE--LLETDLLIMAIG--VRPET-QLARDAGLAIG 280 (565)
T ss_dssp CEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEE-TTSC--EEEESEEEECSC--EEECC-HHHHHHTCCBC
T ss_pred CEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEE-cCCC--EEEcCEEEECcC--Cccch-HHHHhCCcccC
Confidence 99999999999964 2344443 5676 499999999999 57887 57777777 6
Q ss_pred CCCceeeCCCccccCCCCEEEecccccc
Q 010217 350 NRRALATDEWLRVEGSDSIYALGDCATV 377 (515)
Q Consensus 350 ~~g~i~vd~~l~t~~~~~IyA~GD~~~~ 377 (515)
.+|+|.||+++|| +.|+|||+|||+..
T Consensus 281 ~~g~i~vd~~~~t-~~~~IyA~GD~~~~ 307 (565)
T 3ntd_A 281 ELGGIKVNAMMQT-SDPAIYAVGDAVEE 307 (565)
T ss_dssp TTSSBCCCTTCBC-SSTTEEECGGGBCE
T ss_pred CCCCEEECCCccc-CCCCEEEeeeeEee
Confidence 7899999999998 99999999999853
No 12
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=100.00 E-value=3e-37 Score=317.87 Aligned_cols=275 Identities=23% Similarity=0.416 Sum_probs=221.3
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCC--eEEEEcCCCCCccC--CccchhccCcccccccccchHHHHhhcCceEEEEEe
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSY--DVQVISPRNYFAFT--PLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEA 132 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~--~V~vie~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~ 132 (515)
+.++|||||||+||++||..|++.|+ +|+|||+++.+.|. ++...+..+......+.....+++.+.++++ +...
T Consensus 3 ~~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gv~~-~~~~ 81 (431)
T 1q1r_A 3 ANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYLRTPDAYAAQNIQL-LGGT 81 (431)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCSGGGGTTTTTTCSCSGGGBSSCHHHHHHTTEEE-ECSC
T ss_pred CCCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcCCCCcHHHhCCCCChHHhcccCHHHHHhCCCEE-EeCC
Confidence 35899999999999999999998888 79999998776653 2222233333334444445567778888775 3356
Q ss_pred EEEEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCCCCCCC-Cc---cccccChhHHHHHHHHHHHHHH
Q 010217 133 ECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVE-EN---CNFLKEVEDAQRIRRNVIESFE 208 (515)
Q Consensus 133 ~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ipG~~-~~---~~~~~~~~~a~~~~~~~~~~~~ 208 (515)
+|+.++...+.|.+.++. .+.||+||+|||++|+.|++||.+ .+ ++++++.+++..++..+
T Consensus 82 ~v~~i~~~~~~v~~~~g~----------~~~~d~lviAtG~~p~~~~i~G~~~~~~~~v~~~~~~~d~~~l~~~l----- 146 (431)
T 1q1r_A 82 QVTAINRDRQQVILSDGR----------ALDYDRLVLATGGRPRPLPVASGAVGKANNFRYLRTLEDAECIRRQL----- 146 (431)
T ss_dssp CEEEEETTTTEEEETTSC----------EEECSEEEECCCEEECCCGGGTTHHHHSTTEEESSSHHHHHHHHHTC-----
T ss_pred EEEEEECCCCEEEECCCC----------EEECCEEEEcCCCCccCCCCCCcccCCCceEEEECCHHHHHHHHHHh-----
Confidence 799999988888876433 799999999999999999999975 34 67788888887765543
Q ss_pred hcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEecccccccc-ccHHHHHHHHHH
Q 010217 209 KASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM-FDKRITAFAEEK 287 (515)
Q Consensus 209 ~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~~-~~~~~~~~~~~~ 287 (515)
..+++++|||+|++|+|+|..|.++ +.+|+++++.+.+++. +++++.+.+.+.
T Consensus 147 ------------~~~~~vvViGgG~~g~E~A~~l~~~--------------G~~Vtlv~~~~~~l~~~~~~~~~~~l~~~ 200 (431)
T 1q1r_A 147 ------------IADNRLVVIGGGYIGLEVAATAIKA--------------NMHVTLLDTAARVLERVTAPPVSAFYEHL 200 (431)
T ss_dssp ------------CTTCEEEEECCSHHHHHHHHHHHHT--------------TCEEEEECSSSSTTTTTSCHHHHHHHHHH
T ss_pred ------------hcCCeEEEECCCHHHHHHHHHHHhC--------------CCEEEEEEeCCccccchhhHHHHHHHHHH
Confidence 2457999999999999999999886 6899999999999885 889999999999
Q ss_pred hhcCCeEEEcCcEEEEEeC----CeEEEEecCCCceEEEecCeEEEccCCCCccchHHHHHHhCCCCCCceeeCCCcccc
Q 010217 288 FSRDGIDVKLGSMVVKVTD----KEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQTNRRALATDEWLRVE 363 (515)
Q Consensus 288 l~~~gV~v~~~~~v~~i~~----~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~~~~~~g~i~vd~~l~t~ 363 (515)
+++.||++++++.|++++. +.+..+.+.+|+. ++||.||+|+| ..|++ .+++.+++..+++|.||+++||
T Consensus 201 l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~--i~~D~Vv~a~G--~~p~~-~l~~~~gl~~~~gi~Vd~~~~t- 274 (431)
T 1q1r_A 201 HREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTR--LPADLVIAGIG--LIPNC-ELASAAGLQVDNGIVINEHMQT- 274 (431)
T ss_dssp HHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCE--EECSEEEECCC--EEECC-HHHHHTTCCBSSSEECCTTSBC-
T ss_pred HHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCE--EEcCEEEECCC--CCcCc-chhhccCCCCCCCEEECCCccc-
Confidence 9999999999999999975 3454444567764 99999999999 57887 5788888843355999999998
Q ss_pred CCCCEEEeccccccCc
Q 010217 364 GSDSIYALGDCATVNQ 379 (515)
Q Consensus 364 ~~~~IyA~GD~~~~~~ 379 (515)
+.|+|||+|||+..+.
T Consensus 275 s~~~IyA~GD~~~~~~ 290 (431)
T 1q1r_A 275 SDPLIMAVGDCARFHS 290 (431)
T ss_dssp SSTTEEECGGGEEEEE
T ss_pred CCCCEEEEEeEEEEcc
Confidence 9999999999998753
No 13
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=100.00 E-value=3.6e-37 Score=319.56 Aligned_cols=289 Identities=18% Similarity=0.312 Sum_probs=219.3
Q ss_pred CeEEEECCcHHHHHHHHhccCC--CCeEEEEcCCCCCccCC-ccchhccCcc-cccccccchHHHHhhcCceEEEEEeEE
Q 010217 59 KKVVVLGTGWAGTSFLKNLNNP--SYDVQVISPRNYFAFTP-LLPSVTCGTV-EARSIVEPVRNIVRKKNVDICFWEAEC 134 (515)
Q Consensus 59 ~~VvIIGgG~AGlsaA~~L~~~--g~~V~vie~~~~~~~~~-~~~~~~~g~~-~~~~~~~~~~~~~~~~~i~v~~~~~~v 134 (515)
+||||||||+||++||.+|++. |++|+|||+++.++|.+ .++.+..+.. ...++.....+.+.++++++ +.+.+|
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~-~~~~~V 81 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGLSAYFNHTINELHEARYITEEELRRQKIQL-LLNREV 81 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC----------------CCCCHHHHHHTTEEE-ECSCEE
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccchhhhcCCCCCHHHhhcCCHHHHHHCCCEE-EECCEE
Confidence 6999999999999999999966 99999999999888765 3444443433 33455555677888899776 357899
Q ss_pred EEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCCCCCCC-CccccccChhHHHHHHHHHHHHHHhcCCC
Q 010217 135 FKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVE-ENCNFLKEVEDAQRIRRNVIESFEKASLP 213 (515)
Q Consensus 135 ~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ipG~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 213 (515)
+.+++..+.+.+... + +...+.||+||||||++|..|++||.+ .+++.+++..++..+....
T Consensus 82 ~~id~~~~~v~v~~~------~-~~~~~~~d~lviAtG~~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~---------- 144 (452)
T 3oc4_A 82 VAMDVENQLIAWTRK------E-EQQWYSYDKLILATGASQFSTQIRGSQTEKLLKYKFLSGALAAVPLL---------- 144 (452)
T ss_dssp EEEETTTTEEEEEET------T-EEEEEECSEEEECCCCCBCCCCCBTTTCTTEEEGGGCC----CCHHH----------
T ss_pred EEEECCCCEEEEEec------C-ceEEEEcCEEEECCCcccCCCCCCCCCCCCEEEeCCHHHHHHHHHHH----------
Confidence 999999998887511 1 234899999999999999999999986 4566666666665544332
Q ss_pred CCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEecccccccc-ccHHHHHHHHHHhhcCC
Q 010217 214 NLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM-FDKRITAFAEEKFSRDG 292 (515)
Q Consensus 214 ~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~~-~~~~~~~~~~~~l~~~g 292 (515)
..+++++|||+|++|+|+|..+.++ +.+|+++++.+++++. +++++.+.+.+.+++.|
T Consensus 145 -------~~~~~vvViGgG~~g~E~A~~l~~~--------------g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~~~G 203 (452)
T 3oc4_A 145 -------ENSQTVAVIGAGPIGMEAIDFLVKM--------------KKTVHVFESLENLLPKYFDKEMVAEVQKSLEKQA 203 (452)
T ss_dssp -------HTCSEEEEECCSHHHHHHHHHHHHT--------------TCEEEEEESSSSSSTTTCCHHHHHHHHHHHHTTT
T ss_pred -------hcCCEEEEECCCHHHHHHHHHHHhC--------------CCeEEEEEccCccccccCCHHHHHHHHHHHHHcC
Confidence 2567999999999999999999986 6899999999999986 89999999999999999
Q ss_pred eEEEcCcEEEEEe--CCeEEEEecCCCceEEEecCeEEEccCCCCccchHHHHHH-hCCCCCCceeeCCCccccCCCCEE
Q 010217 293 IDVKLGSMVVKVT--DKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQ-VGQTNRRALATDEWLRVEGSDSIY 369 (515)
Q Consensus 293 V~v~~~~~v~~i~--~~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~-~~~~~~g~i~vd~~l~t~~~~~Iy 369 (515)
|++++++.|++++ ++++.+. +.+| +++||.||+|+| ..|++ .+++. +.++.+|+|.||+++|| +.|+||
T Consensus 204 V~i~~~~~v~~i~~~~~~v~v~-~~~g---~i~aD~Vv~A~G--~~p~~-~~l~~~~~~~~~g~i~vd~~~~t-~~~~Iy 275 (452)
T 3oc4_A 204 VIFHFEETVLGIEETANGIVLE-TSEQ---EISCDSGIFALN--LHPQL-AYLDKKIQRNLDQTIAVDAYLQT-SVPNVF 275 (452)
T ss_dssp EEEEETCCEEEEEECSSCEEEE-ESSC---EEEESEEEECSC--CBCCC-SSCCTTSCBCTTSCBCCCTTCBC-SSTTEE
T ss_pred CEEEeCCEEEEEEccCCeEEEE-ECCC---EEEeCEEEECcC--CCCCh-HHHHhhhccCCCCCEEECcCccC-CCCCEE
Confidence 9999999999997 3456333 3445 399999999999 57777 44433 33477899999999998 999999
Q ss_pred EeccccccCc---------cchHHHHHHHHHhhc
Q 010217 370 ALGDCATVNQ---------RRVMEDIAAIFSKAD 394 (515)
Q Consensus 370 A~GD~~~~~~---------~~~~~~~~~~~~~a~ 394 (515)
|+|||+..+. .....+..++..++.
T Consensus 276 A~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~ 309 (452)
T 3oc4_A 276 AIGDCISVMNEPVAETFYAPLVNNAVRTGLVVAN 309 (452)
T ss_dssp ECGGGBCEEEGGGTEEECCCCHHHHHHHHHHHTT
T ss_pred EEEeeEEeccccCCceeecchHHHHHHHHHHHHH
Confidence 9999998642 234455666555544
No 14
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=100.00 E-value=1.8e-36 Score=324.72 Aligned_cols=282 Identities=24% Similarity=0.409 Sum_probs=231.3
Q ss_pred CCCCCCeEEEECCcHHHHHHHHhccCC--CCeEEEEcCCCCCccCC-ccchhccCcccc-c-ccccchHHHHhhcCceEE
Q 010217 54 MGIKKKKVVVLGTGWAGTSFLKNLNNP--SYDVQVISPRNYFAFTP-LLPSVTCGTVEA-R-SIVEPVRNIVRKKNVDIC 128 (515)
Q Consensus 54 ~~~~~~~VvIIGgG~AGlsaA~~L~~~--g~~V~vie~~~~~~~~~-~~~~~~~g~~~~-~-~~~~~~~~~~~~~~i~v~ 128 (515)
+..++++|||||||+||++||.+|++. |++|+|||+++.++|.+ .++....+.... . .+..++..+.++++++++
T Consensus 32 ~~~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~~~~lp~~~~g~~~~~~~~~~~~~~~~~~~~gi~v~ 111 (588)
T 3ics_A 32 DRWGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFANCGLPYYIGGVITERQKLLVQTVERMSKRFNLDIR 111 (588)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTTSSCCGGGGBSSCHHHHHHHTTCEEE
T ss_pred CcccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccccCCCCchhhcCcCCChHHhhccCHHHHHHhcCcEEE
Confidence 334578999999999999999999966 89999999999988765 455555555432 2 255567777778898863
Q ss_pred EEEeEEEEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCCCCCC-C-CccccccChhHHHHHHHHHHHH
Q 010217 129 FWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGV-E-ENCNFLKEVEDAQRIRRNVIES 206 (515)
Q Consensus 129 ~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ipG~-~-~~~~~~~~~~~a~~~~~~~~~~ 206 (515)
.+++|+.++.+.+.+.+.+.. +++...+.||+||||||+.|+.|++||. + ..++...+..++..++..+..
T Consensus 112 -~~~~V~~id~~~~~v~v~~~~-----~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~~v~~~~~~~~~~~~~~~l~~- 184 (588)
T 3ics_A 112 -VLSEVVKINKEEKTITIKNVT-----TNETYNEAYDVLILSPGAKPIVPSIPGIEEAKALFTLRNVPDTDRIKAYIDE- 184 (588)
T ss_dssp -CSEEEEEEETTTTEEEEEETT-----TCCEEEEECSEEEECCCEEECCCCCTTTTTCTTEEECSSHHHHHHHHHHHHH-
T ss_pred -ECCEEEEEECCCCEEEEeecC-----CCCEEEEeCCEEEECCCCCCCCCCCCCcccCCCeEEeCCHHHHHHHHHHHhh-
Confidence 578999999999999887532 3334578999999999999999999998 3 567778888888877666532
Q ss_pred HHhcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccccccccHHHHHHHHH
Q 010217 207 FEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEE 286 (515)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~ 286 (515)
..+++++|||+|++|+|+|..+.++ +.+|+++++.+++++.+++++.+.+.+
T Consensus 185 --------------~~~~~vvViGgG~~g~e~A~~l~~~--------------g~~Vtlv~~~~~~l~~~~~~~~~~l~~ 236 (588)
T 3ics_A 185 --------------KKPRHATVIGGGFIGVEMVENLRER--------------GIEVTLVEMANQVMPPIDYEMAAYVHE 236 (588)
T ss_dssp --------------HCCSEEEEECCSHHHHHHHHHHHHT--------------TCEEEEECSSSSSCTTSCHHHHHHHHH
T ss_pred --------------cCCCeEEEECCCHHHHHHHHHHHhC--------------CCeEEEEecCCcccccCCHHHHHHHHH
Confidence 2567999999999999999999986 689999999999999999999999999
Q ss_pred HhhcCCeEEEcCcEEEEEeCCeEEEEecCCCceEEEecCeEEEccCCCCccchHHHHHHhCC--CCCCceeeCCCccccC
Q 010217 287 KFSRDGIDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ--TNRRALATDEWLRVEG 364 (515)
Q Consensus 287 ~l~~~gV~v~~~~~v~~i~~~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~~~--~~~g~i~vd~~l~t~~ 364 (515)
.+++.||++++++.|++++.++-.+. +.+|++ +++|.||+|+| ..|++ .+++.+++ +.+|+|.||+++|| +
T Consensus 237 ~l~~~GV~i~~~~~v~~i~~~~~~v~-~~~g~~--i~~D~Vi~a~G--~~p~~-~~l~~~g~~~~~~g~i~vd~~~~t-~ 309 (588)
T 3ics_A 237 HMKNHDVELVFEDGVDALEENGAVVR-LKSGSV--IQTDMLILAIG--VQPES-SLAKGAGLALGVRGTIKVNEKFQT-S 309 (588)
T ss_dssp HHHHTTCEEECSCCEEEEEGGGTEEE-ETTSCE--EECSEEEECSC--EEECC-HHHHHTTCCBCGGGCBCCCTTSBC-S
T ss_pred HHHHcCCEEEECCeEEEEecCCCEEE-ECCCCE--EEcCEEEEccC--CCCCh-HHHHhcCceEcCCCCEEECCcccc-C
Confidence 99999999999999999986321222 246764 99999999999 57887 57788887 57899999999998 9
Q ss_pred CCCEEEecccccc
Q 010217 365 SDSIYALGDCATV 377 (515)
Q Consensus 365 ~~~IyA~GD~~~~ 377 (515)
.|+|||+|||+..
T Consensus 310 ~~~IyA~GD~~~~ 322 (588)
T 3ics_A 310 DPHIYAIGDAIEV 322 (588)
T ss_dssp STTEEECGGGBCE
T ss_pred CCCEEEeeeeeec
Confidence 9999999999953
No 15
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=100.00 E-value=6.3e-37 Score=320.82 Aligned_cols=277 Identities=20% Similarity=0.328 Sum_probs=221.0
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCC---CeEEEEcCCCCCccCC-ccchhccCc-ccccccccchHHHHhhcCceEEEEE
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPS---YDVQVISPRNYFAFTP-LLPSVTCGT-VEARSIVEPVRNIVRKKNVDICFWE 131 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g---~~V~vie~~~~~~~~~-~~~~~~~g~-~~~~~~~~~~~~~~~~~~i~v~~~~ 131 (515)
+.+||||||||+||++||..|++.| ++|+|||+++.+++.+ .++....+. ....++.....+.+.+.++++ +.+
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v-~~~ 112 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAGMALWIGEQIAGPEGLFYSDKEELESLGAKV-YME 112 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGGHHHHHTTSSSCSGGGBSCCHHHHHHTTCEE-ETT
T ss_pred cCCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccccchhhcCccCCHHHhhhcCHHHHHhCCCEE-EeC
Confidence 3589999999999999999999877 9999999998776654 233333333 234455556677788888876 357
Q ss_pred eEEEEEecCCCEEEEe-eCCccCCCCCceEEeecCEEEEccCCCcCCCCCCCCC------------CccccccChhHHHH
Q 010217 132 AECFKIDAENKKVYCR-SSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVE------------ENCNFLKEVEDAQR 198 (515)
Q Consensus 132 ~~v~~id~~~~~v~~~-~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ipG~~------------~~~~~~~~~~~a~~ 198 (515)
.+|..++.+.+.|.+. ++. ..++.||+||||||++|..|++||.+ ++++++++++++..
T Consensus 113 ~~v~~i~~~~~~v~v~~~g~--------~~~~~~d~lviAtG~~p~~p~i~G~~~~~~~~~f~~~~~~v~~~~~~~~~~~ 184 (490)
T 2bc0_A 113 SPVQSIDYDAKTVTALVDGK--------NHVETYDKLIFATGSQPILPPIKGAEIKEGSLEFEATLENLQFVKLYQNSAD 184 (490)
T ss_dssp CCEEEEETTTTEEEEEETTE--------EEEEECSEEEECCCEEECCCSCBTCCBCTTCTTCCBSSTTEEECSSHHHHHH
T ss_pred CEEEEEECCCCEEEEEeCCc--------EEEEECCEEEECCCCCcCCCCCCCccccccccccccccCCEEEeCCHHHHHH
Confidence 7899999988888876 321 23799999999999999999999975 45777888888877
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccccc-ccc
Q 010217 199 IRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN-MFD 277 (515)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~-~~~ 277 (515)
+.+.+. ...+++|+|||+|++|+|+|..|.++ +.+|+++++.+++++ .++
T Consensus 185 ~~~~~~---------------~~~~~~vvVIGgG~ig~E~A~~l~~~--------------g~~Vtlv~~~~~~l~~~~~ 235 (490)
T 2bc0_A 185 VIAKLE---------------NKDIKRVAVVGAGYIGVELAEAFQRK--------------GKEVVLIDVVDTCLAGYYD 235 (490)
T ss_dssp HHHHTT---------------STTCCEEEEECCSHHHHHHHHHHHHT--------------TCEEEEEESSSSTTTTTSC
T ss_pred HHHHhh---------------hcCCceEEEECCCHHHHHHHHHHHHC--------------CCeEEEEEcccchhhhHHH
Confidence 655431 02467999999999999999999886 689999999999998 689
Q ss_pred HHHHHHHHHHhhcCCeEEEcCcEEEEEeCCe-EEEEecCCCceEEEecCeEEEccCCCCccchHHHHHHh-CCCCCCcee
Q 010217 278 KRITAFAEEKFSRDGIDVKLGSMVVKVTDKE-IFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQV-GQTNRRALA 355 (515)
Q Consensus 278 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~-v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~-~~~~~g~i~ 355 (515)
+++.+.+.+.+++.||++++++.|++++.++ +..+.+ +|+ +++||.||+|+| ..|++ .+++.. .++.+|+|.
T Consensus 236 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~v~~v~~-~g~--~i~~D~Vi~a~G--~~p~~-~ll~~~l~~~~~G~I~ 309 (490)
T 2bc0_A 236 RDLTDLMAKNMEEHGIQLAFGETVKEVAGNGKVEKIIT-DKN--EYDVDMVILAVG--FRPNT-TLGNGKIDLFRNGAFL 309 (490)
T ss_dssp HHHHHHHHHHHHTTTCEEEETCCEEEEECSSSCCEEEE-SSC--EEECSEEEECCC--EEECC-GGGTTCSCBCTTSCBC
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEcCCcEEEEEE-CCc--EEECCEEEECCC--CCcCh-HHHHhhhccCCCCCEE
Confidence 9999999999999999999999999998643 322222 465 499999999999 57887 455554 225789999
Q ss_pred eCCCccccCCCCEEEeccccccC
Q 010217 356 TDEWLRVEGSDSIYALGDCATVN 378 (515)
Q Consensus 356 vd~~l~t~~~~~IyA~GD~~~~~ 378 (515)
||+++|| +.|+|||+|||+..+
T Consensus 310 Vd~~~~t-~~~~IyA~GD~~~~~ 331 (490)
T 2bc0_A 310 VNKRQET-SIPGVYAIGDCATIY 331 (490)
T ss_dssp CCTTCBC-SSTTEEECGGGBCEE
T ss_pred ECCCccc-CCCCEEEeeeeEEec
Confidence 9999998 999999999999853
No 16
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=100.00 E-value=3.7e-36 Score=311.67 Aligned_cols=278 Identities=21% Similarity=0.368 Sum_probs=220.8
Q ss_pred CeEEEECCcHHHHHHHHhccCC--CCeEEEEcCCCCCccCC-ccchhccCcc-cccccccchHHHHhhcCceEEEEEeEE
Q 010217 59 KKVVVLGTGWAGTSFLKNLNNP--SYDVQVISPRNYFAFTP-LLPSVTCGTV-EARSIVEPVRNIVRKKNVDICFWEAEC 134 (515)
Q Consensus 59 ~~VvIIGgG~AGlsaA~~L~~~--g~~V~vie~~~~~~~~~-~~~~~~~g~~-~~~~~~~~~~~~~~~~~i~v~~~~~~v 134 (515)
+||||||||+||++||..|++. |++|+|||+++.+++.+ .++.+..+.. ...++.....+.+.+.++++ +.+..+
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~-~~~~~v 79 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSAGMQLYLEGKVKDVNSVRYMTGEKMESRGVNV-FSNTEI 79 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBCGGGHHHHHTTSSCCGGGSBSCCHHHHHHTTCEE-EETEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcccccchhhhcCccCCHHHhhcCCHHHHHHCCCEE-EECCEE
Confidence 4899999999999999999965 99999999998877654 2343333432 34455666677788889876 357889
Q ss_pred EEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCCCCCCC-CccccccChhHHHHHHHHHHHHHHhcCCC
Q 010217 135 FKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVE-ENCNFLKEVEDAQRIRRNVIESFEKASLP 213 (515)
Q Consensus 135 ~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ipG~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 213 (515)
..++.+.+.|.+.+.. +++..++.||+||||||++|..|++||.+ ++++++++.+++..+++.+..
T Consensus 80 ~~i~~~~~~v~~~~~~-----~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~~-------- 146 (447)
T 1nhp_A 80 TAIQPKEHQVTVKDLV-----SGEERVENYDKLIISPGAVPFELDIPGKDLDNIYLMRGRQWAIKLKQKTVD-------- 146 (447)
T ss_dssp EEEETTTTEEEEEETT-----TCCEEEEECSEEEECCCEEECCCCSTTTTSBSEECCCHHHHHHHHHHHHTC--------
T ss_pred EEEeCCCCEEEEEecC-----CCceEEEeCCEEEEcCCCCcCCCCCCCCCCCCeEEECCHHHHHHHHHHhhh--------
Confidence 9999999999887521 22233689999999999999999999986 567777788888777655410
Q ss_pred CCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccccc-cccHHHHHHHHHHhhcCC
Q 010217 214 NLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN-MFDKRITAFAEEKFSRDG 292 (515)
Q Consensus 214 ~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~-~~~~~~~~~~~~~l~~~g 292 (515)
..+++++|||+|++|+|+|..+.++ +.+|+++++.+.+++ .+++++.+.+.+.+++.|
T Consensus 147 -------~~~~~vvIiG~G~~g~e~A~~l~~~--------------g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~g 205 (447)
T 1nhp_A 147 -------PEVNNVVVIGSGYIGIEAAEAFAKA--------------GKKVTVIDILDRPLGVYLDKEFTDVLTEEMEANN 205 (447)
T ss_dssp -------TTCCEEEEECCSHHHHHHHHHHHHT--------------TCEEEEEESSSSTTTTTCCHHHHHHHHHHHHTTT
T ss_pred -------cCCCeEEEECCCHHHHHHHHHHHHC--------------CCeEEEEecCcccccccCCHHHHHHHHHHHHhCC
Confidence 1457999999999999999999885 689999999999988 589999999999999999
Q ss_pred eEEEcCcEEEEEeCC-eEEEEecCCCceEEEecCeEEEccCCCCccchHHHHHHh-CCCCCCceeeCCCccccCCCCEEE
Q 010217 293 IDVKLGSMVVKVTDK-EIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQV-GQTNRRALATDEWLRVEGSDSIYA 370 (515)
Q Consensus 293 V~v~~~~~v~~i~~~-~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~-~~~~~g~i~vd~~l~t~~~~~IyA 370 (515)
|++++++.|++++.+ .+..+.. +|+ ++++|.||+|+| ..|++ .+++.. .++.+|+|.||+++|| +.|+|||
T Consensus 206 v~i~~~~~v~~i~~~~~v~~v~~-~~~--~i~~d~vi~a~G--~~p~~-~~~~~~~~~~~~G~i~Vd~~~~t-~~~~Iya 278 (447)
T 1nhp_A 206 ITIATGETVERYEGDGRVQKVVT-DKN--AYDADLVVVAVG--VRPNT-AWLKGTLELHPNGLIKTDEYMRT-SEPDVFA 278 (447)
T ss_dssp EEEEESCCEEEEECSSBCCEEEE-SSC--EEECSEEEECSC--EEESC-GGGTTTSCBCTTSCBCCCTTCBC-SSTTEEE
T ss_pred CEEEcCCEEEEEEccCcEEEEEE-CCC--EEECCEEEECcC--CCCCh-HHHHhhhhhcCCCcEEECccccC-CCCCEEE
Confidence 999999999999864 3322222 354 499999999999 57777 455544 2256789999999998 9999999
Q ss_pred eccccccC
Q 010217 371 LGDCATVN 378 (515)
Q Consensus 371 ~GD~~~~~ 378 (515)
+|||+..+
T Consensus 279 ~GD~~~~~ 286 (447)
T 1nhp_A 279 VGDATLIK 286 (447)
T ss_dssp CGGGSCEE
T ss_pred eeeEEEee
Confidence 99999753
No 17
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=100.00 E-value=1.2e-36 Score=317.60 Aligned_cols=279 Identities=23% Similarity=0.375 Sum_probs=206.4
Q ss_pred CCeEEEECCcHHHHHHHHhccCC--CCeEEEEcCCCCCccCC-ccchhccCcccc-ccc-------ccchHHHHhhcCce
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNP--SYDVQVISPRNYFAFTP-LLPSVTCGTVEA-RSI-------VEPVRNIVRKKNVD 126 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~--g~~V~vie~~~~~~~~~-~~~~~~~g~~~~-~~~-------~~~~~~~~~~~~i~ 126 (515)
+++|+|||||+||++||..|++. |++|+|||+++.++|.+ .++....+.... ..+ ......+....+++
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 82 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYGGCGIPYYVSGEVSNIESLQATPYNVVRDPEFFRINKDVE 82 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC-------------------------------------------CE
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcccccccccchhhcCCCCchHHhccccchhccCHHHHhhhcCcE
Confidence 47999999999999999999966 99999999999887764 355544444332 222 22333334457777
Q ss_pred EEEEEeEEEEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCCCCCCC-CccccccChhHHHHHHHHHHH
Q 010217 127 ICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVE-ENCNFLKEVEDAQRIRRNVIE 205 (515)
Q Consensus 127 v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ipG~~-~~~~~~~~~~~a~~~~~~~~~ 205 (515)
+ +.+++|+.+++..+.+.+.+.. +++...+.||+||||||+.|..|++||.+ ++++.+.+.+++..++..+..
T Consensus 83 ~-~~~~~V~~id~~~~~v~~~~~~-----~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~l~~ 156 (472)
T 3iwa_A 83 A-LVETRAHAIDRAAHTVEIENLR-----TGERRTLKYDKLVLALGSKANRPPVEGMDLAGVTPVTNLDEAEFVQHAISA 156 (472)
T ss_dssp E-ECSEEEEEEETTTTEEEEEETT-----TCCEEEEECSEEEECCCEEECCCSCTTTTSBTEEECCSHHHHHHHHHHCCT
T ss_pred E-EECCEEEEEECCCCEEEEeecC-----CCCEEEEECCEEEEeCCCCcCCCCCCCCCCCCEEEeCCHHHHHHHHHHhhc
Confidence 6 3578999999999999887622 23345799999999999999999999985 567778888888776654310
Q ss_pred HHHhcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccccc-cccHHHHHHH
Q 010217 206 SFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN-MFDKRITAFA 284 (515)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~-~~~~~~~~~~ 284 (515)
..+++++|||+|++|+|+|..+.++. +.+|+++++.+++++ .+++++.+.+
T Consensus 157 ---------------~~~~~vvViGgG~~g~e~A~~l~~~~-------------g~~Vtlv~~~~~~l~~~~~~~~~~~l 208 (472)
T 3iwa_A 157 ---------------GEVSKAVIVGGGFIGLEMAVSLADMW-------------GIDTTVVELADQIMPGFTSKSLSQML 208 (472)
T ss_dssp ---------------TSCSEEEEECCSHHHHHHHHHHHHHH-------------CCEEEEECSSSSSSTTTSCHHHHHHH
T ss_pred ---------------CCCCEEEEECCCHHHHHHHHHHHHhc-------------CCcEEEEEccCcccccccCHHHHHHH
Confidence 13579999999999999999998861 479999999999999 8999999999
Q ss_pred HHHhhcCCeEEEcCcEEEEEeC--CeEEEEecCCCceEEEecCeEEEccCCCCccchHHHHHHhCC--CCCCceeeCCCc
Q 010217 285 EEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ--TNRRALATDEWL 360 (515)
Q Consensus 285 ~~~l~~~gV~v~~~~~v~~i~~--~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~~~--~~~g~i~vd~~l 360 (515)
.+.+++.||+++++++|++++. +.+.+. +.+|++ ++||.||+|+| ..|++ .+++.+++ +.+|+|.||+++
T Consensus 209 ~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~-~~~g~~--i~aD~Vv~a~G--~~p~~-~l~~~~gl~~~~~g~i~vd~~~ 282 (472)
T 3iwa_A 209 RHDLEKNDVVVHTGEKVVRLEGENGKVARV-ITDKRT--LDADLVILAAG--VSPNT-QLARDAGLELDPRGAIIVDTRM 282 (472)
T ss_dssp HHHHHHTTCEEECSCCEEEEEESSSBEEEE-EESSCE--EECSEEEECSC--EEECC-HHHHHHTCCBCTTCCEECCTTC
T ss_pred HHHHHhcCCEEEeCCEEEEEEccCCeEEEE-EeCCCE--EEcCEEEECCC--CCcCH-HHHHhCCccCCCCCCEEECCCc
Confidence 9999999999999999999975 345443 356764 99999999999 57877 57777777 678999999999
Q ss_pred cccCCCCEEEecccccc
Q 010217 361 RVEGSDSIYALGDCATV 377 (515)
Q Consensus 361 ~t~~~~~IyA~GD~~~~ 377 (515)
|| +.|+|||+|||+..
T Consensus 283 ~t-~~~~Iya~GD~~~~ 298 (472)
T 3iwa_A 283 RT-SDPDIFAGGDCVTI 298 (472)
T ss_dssp BC-SSTTEEECGGGEEE
T ss_pred cc-CCCCEEEeccceec
Confidence 98 99999999999953
No 18
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=100.00 E-value=2.1e-36 Score=312.43 Aligned_cols=285 Identities=22% Similarity=0.340 Sum_probs=228.7
Q ss_pred CCeEEEECCcHHHHHHHHhccC---CCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEE
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNN---PSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAEC 134 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~---~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v 134 (515)
+++|||||||+||++||..|++ .|++|+|||+++.+.+.+.++.+..+.....++...+.+++++.+++ ++.++|
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~gv~--~~~~~v 81 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGIH--FIAQSA 81 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTTCE--EECSCE
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCCCE--EEEeEE
Confidence 5799999999999999999998 89999999999999888888888888877888888899999989977 567899
Q ss_pred EEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCCCCCCCC---ccccccChhHHHHHHHHHHHHHHhcC
Q 010217 135 FKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEE---NCNFLKEVEDAQRIRRNVIESFEKAS 211 (515)
Q Consensus 135 ~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ipG~~~---~~~~~~~~~~a~~~~~~~~~~~~~~~ 211 (515)
+.++++.+.|.+.++. ++.||+||||||+.|+.+++||.++ +.+.+++.+++..+++.+....
T Consensus 82 ~~id~~~~~V~~~~g~----------~i~~d~lviAtG~~~~~~~ipG~~~~~~~~~~~~~~~~a~~~~~~~~~~~---- 147 (437)
T 3sx6_A 82 EQIDAEAQNITLADGN----------TVHYDYLMIATGPKLAFENVPGSDPHEGPVQSICTVDHAERAFAEYQALL---- 147 (437)
T ss_dssp EEEETTTTEEEETTSC----------EEECSEEEECCCCEECGGGSTTCSTTTSSEECCSSHHHHHHHHHHHHHHH----
T ss_pred EEEEcCCCEEEECCCC----------EEECCEEEECCCCCcCcccCCCCCcccCcceecccccHHHHHHHHHHHHH----
Confidence 9999999988887543 7999999999999999999999873 5567889999988887765432
Q ss_pred CCCCCHHHHhccceEEEECCChhH------HHHHHHHHHhhHHHHHhhCcccCCCcE-EEEEecccccc----ccccHHH
Q 010217 212 LPNLSDEERKRILHFVIVGGGPTG------VEFAAELHDFVDEDLFKLYPKVKDSVK-ITLLEAADHIL----NMFDKRI 280 (515)
Q Consensus 212 ~~~~~~~~~~~~~~vvVvGgG~~g------~E~A~~l~~~~~~~~~~~~p~~~~~~~-Vtlv~~~~~~l----~~~~~~~ 280 (515)
..++++|||+|+++ +|+|..+....++. +++...+ |+++++.+.++ +.++ +.
T Consensus 148 ----------~~~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~------g~~~~~~~Vtlv~~~~~~~~~~l~~~~-~~ 210 (437)
T 3sx6_A 148 ----------REPGPIVIGAMAGASCFGPAYEYAMIVASDLKKR------GMRDKIPSFTFITSEPYIGHLGIQGVG-DS 210 (437)
T ss_dssp ----------HSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHT------TCGGGCSCEEEEESSSSTTCTTTTCCT-TH
T ss_pred ----------hCCCEEEEEcCCCCCcCcHHHHHHHHHHHHHHHc------CCcccCcEEEEEcCCccccccccCcch-HH
Confidence 23467899987654 99998877654330 1111224 99999998773 3333 47
Q ss_pred HHHHHHHhhcCCeEEEcCcEEEEEeCCeEEEEec-CCCc---eEEEecCeEEEccCCCCccchHHHHHHhCC-CCCCcee
Q 010217 281 TAFAEEKFSRDGIDVKLGSMVVKVTDKEIFTKVR-GNGE---TSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ-TNRRALA 355 (515)
Q Consensus 281 ~~~~~~~l~~~gV~v~~~~~v~~i~~~~v~~~~~-~~G~---~~~i~~D~vi~a~G~~~~p~~~~l~~~~~~-~~~g~i~ 355 (515)
.+.+++.+++.||++++++.|++++++++.+... .+|+ ..++++|++++++|+ .+.. .+.+..++ +.+|+|.
T Consensus 211 ~~~~~~~l~~~gI~~~~~~~v~~v~~~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~--~~~~-~~~~~~gl~~~~G~i~ 287 (437)
T 3sx6_A 211 KGILTKGLKEEGIEAYTNCKVTKVEDNKMYVTQVDEKGETIKEMVLPVKFGMMIPAF--KGVP-AVAGVEGLCNPGGFVL 287 (437)
T ss_dssp HHHHHHHHHHTTCEEECSEEEEEEETTEEEEEEECTTSCEEEEEEEECSEEEEECCE--ECCH-HHHTSTTTBCTTSCBC
T ss_pred HHHHHHHHHHCCCEEEcCCEEEEEECCeEEEEecccCCccccceEEEEeEEEEcCCC--cCch-hhhccccccCCCCcEE
Confidence 7888999999999999999999999988776642 3442 346999999999995 3332 33333456 7789999
Q ss_pred eCCCccccCCCCEEEeccccccC
Q 010217 356 TDEWLRVEGSDSIYALGDCATVN 378 (515)
Q Consensus 356 vd~~l~t~~~~~IyA~GD~~~~~ 378 (515)
||+++|++++|||||+|||+..+
T Consensus 288 Vd~~l~t~~~~~Ifa~GD~~~~~ 310 (437)
T 3sx6_A 288 VDEHQRSKKYANIFAAGIAIAIP 310 (437)
T ss_dssp BCTTSBBSSCTTEEECGGGBCCC
T ss_pred eChhccCCCCCCEEEEEEEeccC
Confidence 99999998999999999999865
No 19
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=100.00 E-value=5.1e-36 Score=313.07 Aligned_cols=279 Identities=23% Similarity=0.401 Sum_probs=221.4
Q ss_pred CCeEEEECCcHHHHHHHHhccCC--CCeEEEEcCCCCCccCC-ccchhccCcc-cccccccchHHHH-hhcCceEEEEEe
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNP--SYDVQVISPRNYFAFTP-LLPSVTCGTV-EARSIVEPVRNIV-RKKNVDICFWEA 132 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~--g~~V~vie~~~~~~~~~-~~~~~~~g~~-~~~~~~~~~~~~~-~~~~i~v~~~~~ 132 (515)
++||+|||||+||++||..|++. |++|+|||+++.+++.+ .++....+.. ...++.....+.+ +..++++ +.+.
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gv~~-~~~~ 114 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCGLPYVISGAIASTEKLIARNVKTFRDKYGIDA-KVRH 114 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGGHHHHHTTSSSCGGGGBSSCHHHHHHTTCCEE-ESSE
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCCcchhhcCCcCCHHHhhhcCHHHHHhhcCCEE-EeCC
Confidence 47999999999999999999864 99999999998876654 3444433332 2344454445555 4558775 3457
Q ss_pred EEEEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCCCCCCC-CccccccChhHHHHHHHHHHHHHHhcC
Q 010217 133 ECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVE-ENCNFLKEVEDAQRIRRNVIESFEKAS 211 (515)
Q Consensus 133 ~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ipG~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~ 211 (515)
+|+.++.+.+.|.+.+.. +++..++.||+||||||++|+.|++||.+ ++++++++.+++.++++.+..
T Consensus 115 ~v~~i~~~~~~v~v~~~~-----~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~~------ 183 (480)
T 3cgb_A 115 EVTKVDTEKKIVYAEHTK-----TKDVFEFSYDRLLIATGVRPVMPEWEGRDLQGVHLLKTIPDAERILKTLET------ 183 (480)
T ss_dssp EEEEEETTTTEEEEEETT-----TCCEEEEECSEEEECCCEEECCCCCBTTTSBTEECCSSHHHHHHHHHHHHS------
T ss_pred EEEEEECCCCEEEEEEcC-----CCceEEEEcCEEEECCCCcccCCCCCCccCCCEEEeCCHHHHHHHHHHhhh------
Confidence 899999988888887521 22234799999999999999999999986 567778888888887765421
Q ss_pred CCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccccccccHHHHHHHHHHhhcC
Q 010217 212 LPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRD 291 (515)
Q Consensus 212 ~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~ 291 (515)
..+++|+|||+|++|+|+|..+.++ +.+|+++++.+.+++.+++++.+.+.+.+++.
T Consensus 184 ---------~~~~~vvViGgG~~g~e~A~~l~~~--------------g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~ 240 (480)
T 3cgb_A 184 ---------NKVEDVTIIGGGAIGLEMAETFVEL--------------GKKVRMIERNDHIGTIYDGDMAEYIYKEADKH 240 (480)
T ss_dssp ---------SCCCEEEEECCHHHHHHHHHHHHHT--------------TCEEEEECCGGGTTSSSCHHHHHHHHHHHHHT
T ss_pred ---------cCCCeEEEECCCHHHHHHHHHHHhc--------------CCeEEEEEeCCchhhcCCHHHHHHHHHHHHHc
Confidence 1467999999999999999999886 68999999999999989999999999999999
Q ss_pred CeEEEcCcEEEEEeCC-eEEEEecCCCceEEEecCeEEEccCCCCccchHHHHHHhCC--CCCCceeeCCCccccCCCCE
Q 010217 292 GIDVKLGSMVVKVTDK-EIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ--TNRRALATDEWLRVEGSDSI 368 (515)
Q Consensus 292 gV~v~~~~~v~~i~~~-~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~~~--~~~g~i~vd~~l~t~~~~~I 368 (515)
||++++++.|++++.+ ++..+.+. +. +++||.||+|+| ..|++ .+++.+++ +.+|+|.||+++|| +.|+|
T Consensus 241 Gv~i~~~~~v~~i~~~~~v~~v~~~-~~--~i~~D~vi~a~G--~~p~~-~~l~~~g~~~~~~G~I~Vd~~~~t-s~p~I 313 (480)
T 3cgb_A 241 HIEILTNENVKAFKGNERVEAVETD-KG--TYKADLVLVSVG--VKPNT-DFLEGTNIRTNHKGAIEVNAYMQT-NVQDV 313 (480)
T ss_dssp TCEEECSCCEEEEEESSBEEEEEET-TE--EEECSEEEECSC--EEESC-GGGTTSCCCBCTTSCBCCCTTSBC-SSTTE
T ss_pred CcEEEcCCEEEEEEcCCcEEEEEEC-CC--EEEcCEEEECcC--CCcCh-HHHHhCCcccCCCCCEEECCCccC-CCCCE
Confidence 9999999999999754 34333333 43 499999999999 57777 46677776 56799999999998 89999
Q ss_pred EEeccccccC
Q 010217 369 YALGDCATVN 378 (515)
Q Consensus 369 yA~GD~~~~~ 378 (515)
||+|||+..+
T Consensus 314 yA~GD~~~~~ 323 (480)
T 3cgb_A 314 YAAGDCATHY 323 (480)
T ss_dssp EECGGGBCEE
T ss_pred EEeeeEEEec
Confidence 9999999653
No 20
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=100.00 E-value=1.4e-36 Score=315.09 Aligned_cols=273 Identities=26% Similarity=0.432 Sum_probs=207.4
Q ss_pred CCeEEEECCcHHHHHHHHhccCC--CCeEEEEcCCCCCccCC-ccchhccCcccccccccchHHHH-hhcCceEEEEEeE
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNP--SYDVQVISPRNYFAFTP-LLPSVTCGTVEARSIVEPVRNIV-RKKNVDICFWEAE 133 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~--g~~V~vie~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~-~~~~i~v~~~~~~ 133 (515)
+++|||||||+||++||..|++. +++|+|||+++.+++.+ .++....+.....++.....+.+ ++.++++ +.+++
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~gi~v-~~~~~ 81 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCGIPYVVEGLSTPDKLMYYPPEVFIKKRGIDL-HLNAE 81 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC------------------------CTHHHHTTCEE-ETTCE
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCcCCccccCCCCCHHHhhhcCHHHHHHhcCcEE-EecCE
Confidence 47999999999999999999965 89999999999887765 45555544444444444333333 6788876 34568
Q ss_pred EEEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCCCCCCC-CccccccChhHHHHHHHHHHHHHHhcCC
Q 010217 134 CFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVE-ENCNFLKEVEDAQRIRRNVIESFEKASL 212 (515)
Q Consensus 134 v~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ipG~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 212 (515)
|+.++...+.+.+.+ +...+.||+||||||+.|+.|++||.+ ++++..++.+++..+...+..
T Consensus 82 v~~i~~~~~~v~~~~---------g~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~~~~~~~~------- 145 (449)
T 3kd9_A 82 VIEVDTGYVRVRENG---------GEKSYEWDYLVFANGASPQVPAIEGVNLKGVFTADLPPDALAIREYMEK------- 145 (449)
T ss_dssp EEEECSSEEEEECSS---------SEEEEECSEEEECCCEEECCCSCBTTTSTTEECSCSTHHHHHHHHHHSS-------
T ss_pred EEEEecCCCEEEECC---------ceEEEEcCEEEECCCCCCCCCCCCCCCCCCEEEeCCHHHHHHHHHHHHh-------
Confidence 999998776665432 124799999999999999999999986 456777888888776654310
Q ss_pred CCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEecccccccc-ccHHHHHHHHHHhhcC
Q 010217 213 PNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM-FDKRITAFAEEKFSRD 291 (515)
Q Consensus 213 ~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~~-~~~~~~~~~~~~l~~~ 291 (515)
..+++++|||+|++|+|+|..+.++ +.+|+++++.+++++. +++++.+.+.+.+++.
T Consensus 146 --------~~~~~vvViGgG~~g~E~A~~l~~~--------------g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~ 203 (449)
T 3kd9_A 146 --------YKVENVVIIGGGYIGIEMAEAFAAQ--------------GKNVTMIVRGERVLRRSFDKEVTDILEEKLKKH 203 (449)
T ss_dssp --------SCCCEEEEECCSHHHHHHHHHHHHT--------------TCEEEEEESSSSTTTTTSCHHHHHHHHHHHTTT
T ss_pred --------cCCCeEEEECCCHHHHHHHHHHHhC--------------CCeEEEEEcCCccchhhcCHHHHHHHHHHHHhC
Confidence 1567999999999999999999986 6899999999999997 9999999999999999
Q ss_pred CeEEEcCcEEEEEeCCe-EEEEecCCCceEEEecCeEEEccCCCCccchHHHHHHhCC--CCCCceeeCCCccccCCCCE
Q 010217 292 GIDVKLGSMVVKVTDKE-IFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ--TNRRALATDEWLRVEGSDSI 368 (515)
Q Consensus 292 gV~v~~~~~v~~i~~~~-v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~~~--~~~g~i~vd~~l~t~~~~~I 368 (515)
|++++++.+.+++.++ +..+. .+|+ ++++|.||+|+| ..|++ .+++.+++ +.+|+|.||+++|| +.|+|
T Consensus 204 -v~i~~~~~v~~i~~~~~v~~v~-~~g~--~i~~D~Vv~a~G--~~p~~-~l~~~~gl~~~~~G~i~vd~~~~t-~~~~I 275 (449)
T 3kd9_A 204 -VNLRLQEITMKIEGEERVEKVV-TDAG--EYKAELVILATG--IKPNI-ELAKQLGVRIGETGAIWTNEKMQT-SVENV 275 (449)
T ss_dssp -SEEEESCCEEEEECSSSCCEEE-ETTE--EEECSEEEECSC--EEECC-HHHHHTTCCBCTTSSBCCCTTCBC-SSTTE
T ss_pred -cEEEeCCeEEEEeccCcEEEEE-eCCC--EEECCEEEEeeC--CccCH-HHHHhCCccCCCCCCEEECCCCcc-CCCCE
Confidence 9999999999998653 33332 3455 499999999999 57887 67788877 67889999999998 99999
Q ss_pred EEecccccc
Q 010217 369 YALGDCATV 377 (515)
Q Consensus 369 yA~GD~~~~ 377 (515)
||+|||+..
T Consensus 276 yA~GD~~~~ 284 (449)
T 3kd9_A 276 YAAGDVAET 284 (449)
T ss_dssp EECSTTBCE
T ss_pred EEeeeeeee
Confidence 999999863
No 21
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=100.00 E-value=1.9e-35 Score=300.33 Aligned_cols=269 Identities=21% Similarity=0.371 Sum_probs=215.0
Q ss_pred CCeEEEECCcHHHHHHHHhccCCC--CeEEEEcCCCCCccC-CccchhccCccccccccc-chHHHHhhcCceEEEEEeE
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPS--YDVQVISPRNYFAFT-PLLPSVTCGTVEARSIVE-PVRNIVRKKNVDICFWEAE 133 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g--~~V~vie~~~~~~~~-~~~~~~~~g~~~~~~~~~-~~~~~~~~~~i~v~~~~~~ 133 (515)
+++|+|||||+||++||..|++.| .+|+|||+++...+. ++++....+.....++.. ....++.+.++++ +.+.+
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~ 82 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADDGRSYSKPMLSTGFSKNKDADGLAMAEPGAMAEQLNARI-LTHTR 82 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSCCCEECGGGGGGTTTTTCCHHHHEEECHHHHHHHTTCEE-ECSCC
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCCCCccCcccccHHHhCCCCHHHhhccCHHHHHHhCCcEE-EeCCE
Confidence 579999999999999999999888 569999988644332 334433333333334433 3566677888775 33667
Q ss_pred EEEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCCCCCCC-CccccccChhHHHHHHHHHHHHHHhcCC
Q 010217 134 CFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVE-ENCNFLKEVEDAQRIRRNVIESFEKASL 212 (515)
Q Consensus 134 v~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ipG~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 212 (515)
|..++...+.|.+.+ ..+.||+||||||+.|..|++||.+ +.++..++..++..++..+
T Consensus 83 v~~i~~~~~~v~~~~-----------~~~~~d~lviAtG~~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~--------- 142 (384)
T 2v3a_A 83 VTGIDPGHQRIWIGE-----------EEVRYRDLVLAWGAEPIRVPVEGDAQDALYPINDLEDYARFRQAA--------- 142 (384)
T ss_dssp CCEEEGGGTEEEETT-----------EEEECSEEEECCCEEECCCCCBSTTTTCEEECSSHHHHHHHHHHH---------
T ss_pred EEEEECCCCEEEECC-----------cEEECCEEEEeCCCCcCCCCCCCcCcCCEEEECCHHHHHHHHHhh---------
Confidence 899998888887642 1799999999999999999999976 5678888888877766554
Q ss_pred CCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEecccccccc-ccHHHHHHHHHHhhcC
Q 010217 213 PNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM-FDKRITAFAEEKFSRD 291 (515)
Q Consensus 213 ~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~~-~~~~~~~~~~~~l~~~ 291 (515)
..+++++|||+|++|+|+|..|.++ +.+|+++++.+++++. +++.+.+.+.+.+++.
T Consensus 143 --------~~~~~v~ViGgG~~g~e~A~~l~~~--------------g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~~ 200 (384)
T 2v3a_A 143 --------AGKRRVLLLGAGLIGCEFANDLSSG--------------GYQLDVVAPCEQVMPGLLHPAAAKAVQAGLEGL 200 (384)
T ss_dssp --------TTCCEEEEECCSHHHHHHHHHHHHT--------------TCEEEEEESSSSSSTTTSCHHHHHHHHHHHHTT
T ss_pred --------ccCCeEEEECCCHHHHHHHHHHHhC--------------CCeEEEEecCcchhhcccCHHHHHHHHHHHHHc
Confidence 2467999999999999999999986 6899999999998887 4889999999999999
Q ss_pred CeEEEcCcEEEEEeC--CeEEEEecCCCceEEEecCeEEEccCCCCccchHHHHHHhCC-CCCCceeeCCCccccCCCCE
Q 010217 292 GIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ-TNRRALATDEWLRVEGSDSI 368 (515)
Q Consensus 292 gV~v~~~~~v~~i~~--~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~~~-~~~g~i~vd~~l~t~~~~~I 368 (515)
||+++++++|++++. +.+.+. +.+|+. +++|.||+|+| ..|++ .+++.+++ ..+| |.||+++|| +.|+|
T Consensus 201 gv~i~~~~~v~~i~~~~~~~~v~-~~~g~~--i~~d~vv~a~G--~~p~~-~l~~~~g~~~~~g-i~vd~~~~t-~~~~I 272 (384)
T 2v3a_A 201 GVRFHLGPVLASLKKAGEGLEAH-LSDGEV--IPCDLVVSAVG--LRPRT-ELAFAAGLAVNRG-IVVDRSLRT-SHANI 272 (384)
T ss_dssp TCEEEESCCEEEEEEETTEEEEE-ETTSCE--EEESEEEECSC--EEECC-HHHHHTTCCBSSS-EEECTTCBC-SSTTE
T ss_pred CCEEEeCCEEEEEEecCCEEEEE-ECCCCE--EECCEEEECcC--CCcCH-HHHHHCCCCCCCC-EEECCCCCC-CCCCE
Confidence 999999999999964 344444 356764 99999999999 57887 47888888 3456 999999998 99999
Q ss_pred EEecccccc
Q 010217 369 YALGDCATV 377 (515)
Q Consensus 369 yA~GD~~~~ 377 (515)
||+|||+..
T Consensus 273 yA~GD~~~~ 281 (384)
T 2v3a_A 273 YALGDCAEV 281 (384)
T ss_dssp EECGGGEEE
T ss_pred EEeeeeeeE
Confidence 999999964
No 22
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=100.00 E-value=7.3e-36 Score=305.25 Aligned_cols=277 Identities=18% Similarity=0.183 Sum_probs=216.6
Q ss_pred CCeEEEECCcHHHHHHHHhccC--CCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEE
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNN--PSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECF 135 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~--~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~ 135 (515)
.|||||||||+||++||.+|++ .+.+|+|||+++.+.+.|+++.+..+..+.+++..+++.+. +.+++ +++++|+
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~-~~gv~--~i~~~v~ 78 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLR-AHGIQ--VVHDSAL 78 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHH-HTTCE--EECSCEE
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHH-HCCCE--EEEeEEE
Confidence 5899999999999999999974 45799999999999999999999888888888877777655 46765 6789999
Q ss_pred EEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCCCCCCCC-----ccccccChhHHHHHHHHHHHHHHhc
Q 010217 136 KIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEE-----NCNFLKEVEDAQRIRRNVIESFEKA 210 (515)
Q Consensus 136 ~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ipG~~~-----~~~~~~~~~~a~~~~~~~~~~~~~~ 210 (515)
.||++.+.+.+.++. ++.||+||||||+.++.+++||..+ ..+.+++.+++..+++.+...
T Consensus 79 ~id~~~~~v~~~~g~----------~i~yd~LviAtG~~~~~~~i~G~~e~~~~~~~~~~~~~~~~~~~~~~l~~~---- 144 (401)
T 3vrd_B 79 GIDPDKKLVKTAGGA----------EFAYDRCVVAPGIDLLYDKIEGYSEALAAKLPHAWKAGEQTALLRRQLESM---- 144 (401)
T ss_dssp EEETTTTEEEETTSC----------EEECSEEEECCCEEECGGGSBTCCSGGGGTSCCCSSCSHHHHHHHHHHHHS----
T ss_pred EEEccCcEEEecccc----------eeecceeeeccCCccccCCccCchhhcccCccceeccHHHHHHHHHHHHhc----
Confidence 999999999987654 8999999999999999999999864 345678888998888876532
Q ss_pred CCCCCCHHHHhccceEEEEC------CChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccc--cccccHHHHH
Q 010217 211 SLPNLSDEERKRILHFVIVG------GGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHI--LNMFDKRITA 282 (515)
Q Consensus 211 ~~~~~~~~~~~~~~~vvVvG------gG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~--l~~~~~~~~~ 282 (515)
..+..+++.+ ++..+.|.+.++..+.+. .. .+.+|++++..+.+ ++.+++.+.+
T Consensus 145 ----------~~~~~~v~~~~~~~i~~~~a~~e~~~~~a~~~~~----~~----~~~~v~i~~~~~~~~~~~~~~~~~~~ 206 (401)
T 3vrd_B 145 ----------DDGGVVIIAPPAPPFRCPPGPYERASQIAHYLKA----HK----SKSKVIILDNSQTFSKQAQFTKGWER 206 (401)
T ss_dssp ----------CTTCEEEEECCSSSCBCTTHHHHHHHHHHHHHHH----HC----TTCEEEEECSSSSCTTHHHHHHHHHH
T ss_pred ----------ccCCcEEEecCCccEEeehHHHHHHHHHHHHHHh----cC----CCCEEEEEcccccccccccccHHHHH
Confidence 1222333332 234456666666554322 11 24799999998876 3457788888
Q ss_pred HHHHHhhcCCeEEEcCcEEEEEeC--CeEEEEecCCCceEEEecCeEEEccCCCCccchHHHHHHhCC-CCCCceeeCCC
Q 010217 283 FAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ-TNRRALATDEW 359 (515)
Q Consensus 283 ~~~~~l~~~gV~v~~~~~v~~i~~--~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~~~-~~~g~i~vd~~ 359 (515)
.+...+++.||++++++.+..++. +...+. +.+|++ +++|+++|++|. .|+ .+++..++ +++|+|.||++
T Consensus 207 ~~~~~l~~~gi~v~~~~~v~~v~~~~~~~~v~-~~~g~~--i~~D~vi~~~g~--~~~--~~~~~~gl~~~~G~i~VD~~ 279 (401)
T 3vrd_B 207 LYGFGTENALIEWHPGPDAAVVKTDTEAMTVE-TSFGET--FKAAVINLIPPQ--RAG--KIAQSASLTNDSGWCPVDIR 279 (401)
T ss_dssp HSCTTSTTCSEEEECTTTTCEEEEETTTTEEE-ETTSCE--EECSEEEECCCE--EEC--HHHHHTTCCCTTSSBCBCTT
T ss_pred HHHHHHHhcCcEEEeCceEEEEEecccceEEE-cCCCcE--EEeeEEEEecCc--CCc--hhHhhccccccCCCEEECCC
Confidence 888889999999999998887763 233333 367875 999999999994 554 46778888 78899999987
Q ss_pred -ccccCCCCEEEeccccc
Q 010217 360 -LRVEGSDSIYALGDCAT 376 (515)
Q Consensus 360 -l~t~~~~~IyA~GD~~~ 376 (515)
||++++|||||+|||+.
T Consensus 280 tl~~t~~p~VfAiGDva~ 297 (401)
T 3vrd_B 280 TFESSLQPGIHVIGDACN 297 (401)
T ss_dssp TCBBSSSTTEEECGGGBC
T ss_pred cceecCCCCEEEeccccc
Confidence 78779999999999986
No 23
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=100.00 E-value=3.1e-35 Score=301.35 Aligned_cols=283 Identities=21% Similarity=0.322 Sum_probs=232.9
Q ss_pred CeEEEECCcHHHHHHHHhccC---CCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEE
Q 010217 59 KKVVVLGTGWAGTSFLKNLNN---PSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECF 135 (515)
Q Consensus 59 ~~VvIIGgG~AGlsaA~~L~~---~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~ 135 (515)
++|||||||+||+++|..|++ .|++|+|||+++.+.+.+.++....+.....++...+.+.+.+.++++ ..++|+
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~--~~~~v~ 79 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQF--QEGTVE 79 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGTCEE--EECEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCCeEE--EEeeEE
Confidence 689999999999999999998 899999999999998888888877787788888889999999899774 566999
Q ss_pred EEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCCCCCCCCccccccChhHHHHHHHHHHHHHHhcCCCCC
Q 010217 136 KIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNL 215 (515)
Q Consensus 136 ~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 215 (515)
.++.+.+.|.+.++. ++.+++.||+||+|||+.|+.+++||.++....+.+.+++..+++.+..
T Consensus 80 ~i~~~~~~V~~~~g~------~~~~~~~~d~lViAtG~~~~~~~ipG~~~~~~~~~~~~~~~~~~~~l~~---------- 143 (409)
T 3h8l_A 80 KIDAKSSMVYYTKPD------GSMAEEEYDYVIVGIGAHLATELVKGWDKYGYSVCEPEFATKLREKLES---------- 143 (409)
T ss_dssp EEETTTTEEEEECTT------SCEEEEECSEEEECCCCEECGGGSBTHHHHCEESSSTTHHHHHHHHHHH----------
T ss_pred EEeCCCCEEEEccCC------cccceeeCCEEEECCCCCcCccCCCChhhcCcCcCCHHHHHHHHHHHHH----------
Confidence 999999999887643 2235699999999999999999999987666778888999888877643
Q ss_pred CHHHHhccceEEEECCCh-------------------------hHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccc
Q 010217 216 SDEERKRILHFVIVGGGP-------------------------TGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAAD 270 (515)
Q Consensus 216 ~~~~~~~~~~vvVvGgG~-------------------------~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~ 270 (515)
..++++|||+|. .++|+|..+..+.++ .++++..+|+++++.+
T Consensus 144 ------~~~~~vViG~G~f~~~~~~~~~~p~~~~p~~~~~~~~~~~e~a~~~~~~l~~------~g~~~~~~v~~~~~~~ 211 (409)
T 3h8l_A 144 ------FQGGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFKK------KGMLDKVHVTVFSPGE 211 (409)
T ss_dssp ------CCSEEEEEEECCBCCCCSSCCBSCTTSSCCCSCSSCHHHHHHHHHHHHHHHT------TTCTTTEEEEEECSSS
T ss_pred ------hcCCeEEEEecccccCCCccccccccccCCCCcccCCHHHHHHHHHHHHHHH------cCCCCCeEEEEEeCCc
Confidence 113677999992 588999887765432 1122346999999988
Q ss_pred cccccccHHHHHHHHHHhhcCCeEEEcCcEEEEEeCCeEEEEecCCCceEEEecCeEEEccCCCCccchHHHHHHh--CC
Q 010217 271 HILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQV--GQ 348 (515)
Q Consensus 271 ~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~--~~ 348 (515)
+++.+++.+.+.+.+.+++.||++++++.|++++++++++ .+|++ +++|+||+++|+ .|+ .++..+ ++
T Consensus 212 -~l~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~v~~---~~g~~--~~~D~vi~a~G~--~~~--~~l~~~~~~l 281 (409)
T 3h8l_A 212 -YLSDLSPNSRKAVASIYNQLGIKLVHNFKIKEIREHEIVD---EKGNT--IPADITILLPPY--TGN--PALKNSTPDL 281 (409)
T ss_dssp -SSTTBCHHHHHHHHHHHHHHTCEEECSCCEEEECSSEEEE---TTSCE--EECSEEEEECCE--ECC--HHHHTSCGGG
T ss_pred -cccccCHHHHHHHHHHHHHCCCEEEcCCceEEECCCeEEE---CCCCE--EeeeEEEECCCC--Ccc--HHHHhccccC
Confidence 7888899999999999999999999999999999887544 45764 999999999995 444 345555 55
Q ss_pred -CCCCceeeCCCccccCCCCEEEeccccccCccc
Q 010217 349 -TNRRALATDEWLRVEGSDSIYALGDCATVNQRR 381 (515)
Q Consensus 349 -~~~g~i~vd~~l~t~~~~~IyA~GD~~~~~~~~ 381 (515)
+.+|+|.||+++|++++|||||+|||+..+..+
T Consensus 282 ~~~~G~i~vd~~~~~~~~~~vfa~GD~~~~~~~~ 315 (409)
T 3h8l_A 282 VDDGGFIPTDLNMVSIKYDNVYAVGDANSMTVPK 315 (409)
T ss_dssp SCTTSCBCBBTTSBBSSCTTEEECGGGBTTCCSC
T ss_pred cCCCCCEEeCcccccCCCCCEEEeehhccCCCCc
Confidence 678899999999988999999999999864433
No 24
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=100.00 E-value=2.7e-35 Score=290.61 Aligned_cols=283 Identities=15% Similarity=0.142 Sum_probs=197.2
Q ss_pred CCCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCc-----ccccccccchHHHHhhcCceEEEE
Q 010217 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGT-----VEARSIVEPVRNIVRKKNVDICFW 130 (515)
Q Consensus 56 ~~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~-----~~~~~~~~~~~~~~~~~~i~v~~~ 130 (515)
.+.+||+||||||||++||.+|++.|++|+|||+. .++++.......... ....++.........+.+..+. .
T Consensus 4 e~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~-~~gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 81 (312)
T 4gcm_A 4 EIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERG-IPGGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGAVYQ-Y 81 (312)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHHHTTCEEE-E
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecC-CCCCeeecccccCCcCCccccchHHHHHHHHHHHhhcccccc-c
Confidence 45689999999999999999999999999999975 345543322221111 1112333444455556665442 3
Q ss_pred EeEEEEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCCCCCCCCcc-ccccChhHHHHHHHHHHHHHHh
Q 010217 131 EAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENC-NFLKEVEDAQRIRRNVIESFEK 209 (515)
Q Consensus 131 ~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ipG~~~~~-~~~~~~~~a~~~~~~~~~~~~~ 209 (515)
...+...+.....+...++. ++.||+||||||++|+.|++||.++.. ..+..... .+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~----------~~~~d~liiAtGs~~~~~~ipG~~~~~~~~v~~~~~--------~~---- 139 (312)
T 4gcm_A 82 GDIKSVEDKGEYKVINFGNK----------ELTAKAVIIATGAEYKKIGVPGEQELGGRGVSYCAV--------CD---- 139 (312)
T ss_dssp CCCCEEEECSSCEEEECSSC----------EEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHH--------HH----
T ss_pred eeeeeeeeeecceeeccCCe----------EEEeceeEEcccCccCcCCCCChhhhCCccEEeeec--------cC----
Confidence 33444444444444433322 899999999999999999999986321 11111100 00
Q ss_pred cCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccccccccHHHHHHHHHHhh
Q 010217 210 ASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFS 289 (515)
Q Consensus 210 ~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~ 289 (515)
....++|+++|||||++|+|+|..|+++ +.+||++++.+++++.... ....++
T Consensus 140 --------~~~~~~k~vvViGgG~ig~E~A~~l~~~--------------g~~Vtlv~~~~~~~~~~~~-----~~~~~~ 192 (312)
T 4gcm_A 140 --------GAFFKNKRLFVIGGGDSAVEEGTFLTKF--------------ADKVTIVHRRDELRAQRIL-----QDRAFK 192 (312)
T ss_dssp --------GGGGTTCEEEEECCSHHHHHHHHHHTTT--------------CSEEEEECSSSSCCSCHHH-----HHHHHH
T ss_pred --------ccccCCCEEEEECCCHHHHHHHHHHHhc--------------CCEEEEEecccccCcchhH-----HHHHHH
Confidence 0112567999999999999999999886 6899999999988764221 235667
Q ss_pred cCCeEEEcCcEEEEEeCC-----eEEEEecCCCceEEEecCeEEEccCCCCccchHHHHHHhCC-CCCCceeeCCCcccc
Q 010217 290 RDGIDVKLGSMVVKVTDK-----EIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ-TNRRALATDEWLRVE 363 (515)
Q Consensus 290 ~~gV~v~~~~~v~~i~~~-----~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~~~-~~~g~i~vd~~l~t~ 363 (515)
+.++.......+..+... ........+++...+++|.|++++| ..|++ .+++.+++ +++|+|.||++|||
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~g--~~~~~-~~~~~~g~~~~~G~I~vd~~~~T- 268 (312)
T 4gcm_A 193 NDKIDFIWSHTLKSINEKDGKVGSVTLTSTKDGSEETHEADGVFIYIG--MKPLT-APFKDLGITNDVGYIVTKDDMTT- 268 (312)
T ss_dssp CTTEEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSC--EEESC-GGGGGGTCBCTTSCBCCCTTSBC-
T ss_pred hcCcceeeecceeeeeccccccccceeeeecCCceeEEeeeeEEeecC--CCcCc-hhHHhcceecCCCeEeeCCCCcc-
Confidence 788998888777666421 1233333456666799999999999 57877 66777777 67899999999998
Q ss_pred CCCCEEEeccccccCccchHHHHHHHHHhh
Q 010217 364 GSDSIYALGDCATVNQRRVMEDIAAIFSKA 393 (515)
Q Consensus 364 ~~~~IyA~GD~~~~~~~~~~~~~~~~~~~a 393 (515)
|+|+|||+|||+..+...+..|+.++..+|
T Consensus 269 s~pgIyA~GDv~~~~~~~~~~A~~~G~~AA 298 (312)
T 4gcm_A 269 SVPGIFAAGDVRDKGLRQIVTATGDGSIAA 298 (312)
T ss_dssp SSTTEEECSTTBSCSCCSHHHHHHHHHHHH
T ss_pred CCCCEEEEeecCCCcchHHHHHHHHHHHHH
Confidence 999999999999866666677777766554
No 25
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=100.00 E-value=2.6e-34 Score=284.44 Aligned_cols=280 Identities=19% Similarity=0.255 Sum_probs=204.9
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccc----hhcc-CcccccccccchHHHHhhcCceEEEEE
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLP----SVTC-GTVEARSIVEPVRNIVRKKNVDICFWE 131 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~----~~~~-g~~~~~~~~~~~~~~~~~~~i~v~~~~ 131 (515)
+++||+|||||+||+++|..|++.|++|+|||++ .++..... .++. ......++...+...+.++++++.+
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-- 89 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLL-- 89 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHTTTCCEEE--
T ss_pred CccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeecccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEE--
Confidence 4579999999999999999999999999999998 44432211 1111 1122345666677888888988643
Q ss_pred eEEEEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCCCCCCCCc---cccccChhHHHHHHHHHHHHHH
Q 010217 132 AECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEEN---CNFLKEVEDAQRIRRNVIESFE 208 (515)
Q Consensus 132 ~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ipG~~~~---~~~~~~~~~a~~~~~~~~~~~~ 208 (515)
++|+.++.+++.+.+.... + ..+.||+||+|||+.|+.|++||.... ........+
T Consensus 90 ~~v~~i~~~~~~~~v~~~~-----g---~~~~~d~lvlAtG~~~~~~~i~g~~~~~~~~~~~~~~~~------------- 148 (323)
T 3f8d_A 90 DIVEKIENRGDEFVVKTKR-----K---GEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVAD------------- 148 (323)
T ss_dssp SCEEEEEEC--CEEEEESS-----S---CEEEEEEEEECCCCEECCCCCTTTTTTBTTTEESCHHHH-------------
T ss_pred EEEEEEEecCCEEEEEECC-----C---CEEEcCEEEECcCCCCccCCCCchhhhcCCceEEeccCC-------------
Confidence 8899999876655544322 1 178999999999999999999997641 111111100
Q ss_pred hcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccccccccHHHHHHHHHHh
Q 010217 209 KASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKF 288 (515)
Q Consensus 209 ~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l 288 (515)
.....+++++|||+|++|+|+|..|.+. +.+|+++++.+.+++ ++. .+.+.+
T Consensus 149 ---------~~~~~~~~v~vvG~G~~~~e~a~~l~~~--------------g~~v~~~~~~~~~~~--~~~---~~~~~~ 200 (323)
T 3f8d_A 149 ---------APLFKNRVVAVIGGGDSALEGAEILSSY--------------STKVYLIHRRDTFKA--QPI---YVETVK 200 (323)
T ss_dssp ---------GGGGTTCEEEEECCSHHHHHHHHHHHHH--------------SSEEEEECSSSSCCS--CHH---HHHHHH
T ss_pred ---------HhHcCCCEEEEECCCHHHHHHHHHHHHh--------------CCeEEEEEeCCCCCc--CHH---HHHHHH
Confidence 0112567999999999999999999886 579999999988766 222 333444
Q ss_pred hcCCeEEEcCcEEEEEeCC----eEEEEecCCCceEEEecCeEEEccCCCCccchHHHHHHhCC--CCCCceeeCCCccc
Q 010217 289 SRDGIDVKLGSMVVKVTDK----EIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ--TNRRALATDEWLRV 362 (515)
Q Consensus 289 ~~~gV~v~~~~~v~~i~~~----~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~~~--~~~g~i~vd~~l~t 362 (515)
++.||++++++.+++++.+ .+.+.+..+|+..++++|.||+|+| ..|++ .+++.+++ +.+|+|.||++++|
T Consensus 201 ~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G--~~p~~-~~~~~~g~~~~~~g~i~vd~~~~t 277 (323)
T 3f8d_A 201 KKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIG--FDPPT-DFAKSNGIETDTNGYIKVDEWMRT 277 (323)
T ss_dssp TCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCC--EECCH-HHHHHTTCCBCTTSSBCCCTTCBC
T ss_pred hCCCcEEEeCCEEEEEeccCceeEEEEEECCCCceEEEEcCEEEEEEC--CCCCh-hHHhhcCeeecCCCcEecCCCcee
Confidence 5669999999999999764 2555544458766799999999999 57777 67788877 67899999999998
Q ss_pred cCCCCEEEeccccccC--ccchHHHHHHHHHhh
Q 010217 363 EGSDSIYALGDCATVN--QRRVMEDIAAIFSKA 393 (515)
Q Consensus 363 ~~~~~IyA~GD~~~~~--~~~~~~~~~~~~~~a 393 (515)
+.|+|||+|||+..+ ...+..++.++..++
T Consensus 278 -~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa 309 (323)
T 3f8d_A 278 -SVPGVFAAGDCTSAWLGFRQVITAVAQGAVAA 309 (323)
T ss_dssp -SSTTEEECSTTBSTTTTCCCHHHHHHHHHHHH
T ss_pred -cCCCEEEcceecCCCCcccceeehhhHHHHHH
Confidence 999999999999863 455666666655444
No 26
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=100.00 E-value=1.2e-34 Score=298.86 Aligned_cols=281 Identities=23% Similarity=0.335 Sum_probs=220.1
Q ss_pred CCeEEEECCcHHHHHHHHhccC--CCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEE
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNN--PSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECF 135 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~--~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~ 135 (515)
+++|||||||+||+++|.+|++ .|++|+|||+++.+++.+.++....+.....++...+..++++.+++ ++.++|+
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gv~--~~~~~v~ 79 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIE--FINEKAE 79 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEE--EECSCEE
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcCCE--EEEEEEE
Confidence 4799999999999999999997 89999999999999998888888888777788888888888888866 5578999
Q ss_pred EEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCCCCCCC--CccccccChhHHHHHHHHHHHHHHhcCCC
Q 010217 136 KIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVE--ENCNFLKEVEDAQRIRRNVIESFEKASLP 213 (515)
Q Consensus 136 ~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ipG~~--~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 213 (515)
.++++.+.|.+.++. ++.||+||+|||+.+..| |.. .....+.+.+++..+++.+....
T Consensus 80 ~id~~~~~v~~~~g~----------~i~~d~liiAtG~~~~~p---g~~~~g~~~~~~~~~~a~~~~~~~~~~~------ 140 (430)
T 3h28_A 80 SIDPDANTVTTQSGK----------KIEYDYLVIATGPKLVFG---AEGQEENSTSICTAEHALETQKKLQELY------ 140 (430)
T ss_dssp EEETTTTEEEETTCC----------EEECSEEEECCCCEEECC---SBTHHHHSCCCSSHHHHHHHHHHHHHHH------
T ss_pred EEECCCCEEEECCCc----------EEECCEEEEcCCcccccC---CCCCcCCccCcCCHHHHHHHHHHHHHHH------
Confidence 999999888876543 799999999999997765 432 23456778888888877654321
Q ss_pred CCCHHHHhccceEEEECCChhH------HHHHHHHHHhhHHHHHhhCcccCCCcEEEEEecccccc----ccccHHHHHH
Q 010217 214 NLSDEERKRILHFVIVGGGPTG------VEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL----NMFDKRITAF 283 (515)
Q Consensus 214 ~~~~~~~~~~~~vvVvGgG~~g------~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l----~~~~~~~~~~ 283 (515)
+.++++|||+|+++ +|+|..+....++ . +++...+|+++++.+.+. +.++ ...+.
T Consensus 141 --------~~~~~vVVGgG~~~~~~G~~~E~a~~la~~l~~----~--g~~~~~~V~~v~~~~~~~~~~l~~~~-~~~~~ 205 (430)
T 3h28_A 141 --------ANPGPVVIGAIPGVSCFGPAYEFALMLHYELKK----R--GIRYKVPMTFITSEPYLGHFGVGGIG-ASKRL 205 (430)
T ss_dssp --------HSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHH----T--TCGGGCCEEEECSSSSTTCTTTTCST-THHHH
T ss_pred --------hcCCeEEEEcCCCCCcCcHHHHHHHHHHHHHHH----c--CCccceEEEEecCCccccccccCcch-HHHHH
Confidence 23467899998764 9999877665432 1 111236899999988763 3333 47788
Q ss_pred HHHHhhcCCeEEEcCcEEEEEeCCeEEEEecCCCceEEEecCeEEEccCCCCccchHHHHHH-hCC-CCCC-ceeeCCCc
Q 010217 284 AEEKFSRDGIDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQ-VGQ-TNRR-ALATDEWL 360 (515)
Q Consensus 284 ~~~~l~~~gV~v~~~~~v~~i~~~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~-~~~-~~~g-~i~vd~~l 360 (515)
+++.+++.||++++++.|++|+++++++... +++..++++|.|++++|+ .|+. .+.+. .++ +.+| +|.||+++
T Consensus 206 l~~~l~~~GV~i~~~~~v~~v~~~~v~~~~~-~~~g~~i~~D~vv~a~G~--~~~~-~l~~~~~gl~~~~G~~i~Vd~~l 281 (430)
T 3h28_A 206 VEDLFAERNIDWIANVAVKAIEPDKVIYEDL-NGNTHEVPAKFTMFMPSF--QGPE-VVASAGDKVANPANKMVIVNRCF 281 (430)
T ss_dssp HHHHHHHTTCEEECSCEEEEECSSEEEEECT-TSCEEEEECSEEEEECEE--ECCH-HHHTTCTTTBCTTTCCBCCCTTS
T ss_pred HHHHHHHCCCEEEeCCEEEEEeCCeEEEEec-CCCceEEeeeEEEECCCC--ccch-hHhhccccCcCCCCCEEecCccc
Confidence 8899999999999999999999888777643 233346999999999995 3432 23222 466 6788 99999999
Q ss_pred cccCCCCEEEeccccccC
Q 010217 361 RVEGSDSIYALGDCATVN 378 (515)
Q Consensus 361 ~t~~~~~IyA~GD~~~~~ 378 (515)
|++++|||||+|||+..+
T Consensus 282 ~t~~~~~Ifa~GD~~~~~ 299 (430)
T 3h28_A 282 QNPTYKNIFGVGVVTAIP 299 (430)
T ss_dssp BCSSSTTEEECSTTBCCC
T ss_pred cCCCCCCEEEEEeeeccC
Confidence 988999999999999865
No 27
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=100.00 E-value=6.2e-35 Score=288.13 Aligned_cols=285 Identities=17% Similarity=0.184 Sum_probs=196.8
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCC--ccchh-----ccC---cccccccccchHHHHhhcCce
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTP--LLPSV-----TCG---TVEARSIVEPVRNIVRKKNVD 126 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~--~~~~~-----~~g---~~~~~~~~~~~~~~~~~~~i~ 126 (515)
..+||+||||||||++||.+|++.|++|+|||+....+..+ .++.. .++ .....++...+...+.+.++.
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~~~~~~~~~~~~ 82 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYGTT 82 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCE
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHHHHHHHhhcCcE
Confidence 35899999999999999999999999999999875322211 11100 011 112234555666777778766
Q ss_pred EEEEEeEEEEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCCCCCCCCc-cccccChhHHHHHHHHHHH
Q 010217 127 ICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEEN-CNFLKEVEDAQRIRRNVIE 205 (515)
Q Consensus 127 v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ipG~~~~-~~~~~~~~~a~~~~~~~~~ 205 (515)
+...++..+....+...+.... ..++.||+||||||+.|+.|++||.+.. ...+.........
T Consensus 83 --~~~~~v~~~~~~~~~~~~~~~~--------~~~~~~~~liiATG~~~~~~~ipG~~~~~~~~~~~~~~~~~~------ 146 (314)
T 4a5l_A 83 --IITETIDHVDFSTQPFKLFTEE--------GKEVLTKSVIIATGATAKRMHVPGEDKYWQNGVSACAICDGA------ 146 (314)
T ss_dssp --EECCCEEEEECSSSSEEEEETT--------CCEEEEEEEEECCCEEECCCCCTTHHHHBTTTEESCHHHHTT------
T ss_pred --EEEeEEEEeecCCCceEEEECC--------CeEEEEeEEEEcccccccccCCCccccccccceeeehhhhhh------
Confidence 3455566666555433332211 1289999999999999999999997522 1112221111100
Q ss_pred HHHhcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccccccccHHHHHHHH
Q 010217 206 SFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAE 285 (515)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~ 285 (515)
....++++++|||+|++|+|+|..|.++ +.+||++++.+..... . ....
T Consensus 147 ------------~~~~~~~~vvViGgG~ig~e~A~~l~~~--------------G~~Vt~v~~~~~~~~~--~---~~~~ 195 (314)
T 4a5l_A 147 ------------VPIFRNKVLMVVGGGDAAMEEALHLTKY--------------GSKVIILHRRDAFRAS--K---TMQE 195 (314)
T ss_dssp ------------SGGGTTSEEEEECSSHHHHHHHHHHTTT--------------SSEEEEECSSSSCCSC--H---HHHH
T ss_pred ------------hhhcCCCeEEEECCChHHHHHHHHHHHh--------------CCeeeeeccccccccc--c---hhhh
Confidence 0113567999999999999999999986 6899999988765432 2 2234
Q ss_pred HHhhcCCeEEEcCcEEEEEeCC-----eEEEEecCCCceEEEecCeEEEccCCCCccchHHHHHHhCC-CCCCceeeCCC
Q 010217 286 EKFSRDGIDVKLGSMVVKVTDK-----EIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ-TNRRALATDEW 359 (515)
Q Consensus 286 ~~l~~~gV~v~~~~~v~~i~~~-----~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~~~-~~~g~i~vd~~ 359 (515)
+.+...+++.+....+.++... ++.+.....++..++++|.|++++| ..|++ +++..... +++|.| ||++
T Consensus 196 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~d~vi~a~G--~~pn~-~~l~~~~~~~~~G~i-v~~~ 271 (314)
T 4a5l_A 196 RVLNHPKIEVIWNSELVELEGDGDLLNGAKIHNLVSGEYKVVPVAGLFYAIG--HSPNS-KFLGGQVKTADDGYI-LTEG 271 (314)
T ss_dssp HHHTCTTEEEECSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSC--EEESC-GGGTTSSCBCTTSCB-CCBT
T ss_pred hhhcccceeeEeeeeeEEEEeeeeccceeEEeecccccceeeccccceEecc--cccCh-hHhcccceEcCCeeE-eCCC
Confidence 5566778999999988888642 3455554555555799999999999 68888 44443222 555654 8899
Q ss_pred ccccCCCCEEEeccccccCccchHHHHHHHHHhh
Q 010217 360 LRVEGSDSIYALGDCATVNQRRVMEDIAAIFSKA 393 (515)
Q Consensus 360 l~t~~~~~IyA~GD~~~~~~~~~~~~~~~~~~~a 393 (515)
+|| |+|||||+|||+..+.+++..|+.++..+|
T Consensus 272 ~~T-s~pgIyA~GDv~~~~~~~~~~A~~~G~~AA 304 (314)
T 4a5l_A 272 PKT-SVDGVFACGDVCDRVYRQAIVAAGSGCMAA 304 (314)
T ss_dssp TBC-SSTTEEECSTTTCSSCCCHHHHHHHHHHHH
T ss_pred Ccc-CCCCEEEEEeccCCcchHHHHHHHHHHHHH
Confidence 998 999999999999988777777777766554
No 28
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=100.00 E-value=8.3e-35 Score=303.26 Aligned_cols=272 Identities=17% Similarity=0.249 Sum_probs=199.2
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhc---------------------cCc-------ccc
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVT---------------------CGT-------VEA 109 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~---------------------~g~-------~~~ 109 (515)
++||+|||||+||++||..|++.|++|+|||+++.+++++....+. .|. .+.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 81 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVTMDS 81 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCEECH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCH
Confidence 4799999999999999999999999999999998777653211100 010 000
Q ss_pred ccc-----------ccchHHHHhhcCceEEEEEeEEEEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCC
Q 010217 110 RSI-----------VEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (515)
Q Consensus 110 ~~~-----------~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~ 178 (515)
..+ ...+..++++.++++ ..+++..++.. .+.+... +++...+.||+||+|||+.|..|
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~~v~~--~~g~~~~i~~~--~~~v~~~------~G~~~~~~~d~lviAtG~~p~~p 151 (468)
T 2qae_A 82 AKMQQQKERAVKGLTGGVEYLFKKNKVTY--YKGEGSFETAH--SIRVNGL------DGKQEMLETKKTIIATGSEPTEL 151 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCEE--EEEEEEEEETT--EEEEEET------TSCEEEEEEEEEEECCCEEECCB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEEEEEEeeCC--EEEEEec------CCceEEEEcCEEEECCCCCcCCC
Confidence 111 111245566678774 45556667754 4444321 12124799999999999999999
Q ss_pred CCCCCCCccccccChhHHHHHHHHHHHHHHhcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccC
Q 010217 179 NTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVK 258 (515)
Q Consensus 179 ~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~ 258 (515)
+++|.+.. .+.+.+++.. +. ..+++++|||+|++|+|+|..+.++
T Consensus 152 ~~~g~~~~--~v~t~~~~~~-------------~~-------~~~~~vvViGgG~~g~E~A~~l~~~------------- 196 (468)
T 2qae_A 152 PFLPFDEK--VVLSSTGALA-------------LP-------RVPKTMVVIGGGVIGLELGSVWARL------------- 196 (468)
T ss_dssp TTBCCCSS--SEECHHHHHT-------------CS-------SCCSEEEEECCSHHHHHHHHHHHHT-------------
T ss_pred CCCCCCcC--ceechHHHhh-------------cc-------cCCceEEEECCCHHHHHHHHHHHHh-------------
Confidence 99887531 1223333221 11 1346999999999999999999986
Q ss_pred CCcEEEEEeccccccccccHHHHHHHHHHh-hcCCeEEEcCcEEEEEeCC--eEEEEec-CCCceEEEecCeEEEccCCC
Q 010217 259 DSVKITLLEAADHILNMFDKRITAFAEEKF-SRDGIDVKLGSMVVKVTDK--EIFTKVR-GNGETSSMPYGMVVWSTGIA 334 (515)
Q Consensus 259 ~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l-~~~gV~v~~~~~v~~i~~~--~v~~~~~-~~G~~~~i~~D~vi~a~G~~ 334 (515)
+.+|+++++.+++++.+++++.+.+.+.+ ++.||+++++++|++++.+ .+.+... .+|+..++++|.||+|+|
T Consensus 197 -g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G-- 273 (468)
T 2qae_A 197 -GAEVTVVEFAPRCAPTLDEDVTNALVGALAKNEKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVG-- 273 (468)
T ss_dssp -TCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCCEEECSCEEEEEEECSSSEEEEEECC---EEEEEESEEEECSC--
T ss_pred -CCEEEEEecCCcccccCCHHHHHHHHHHHhhcCCcEEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEECCEEEECCC--
Confidence 68999999999999999999999999999 9999999999999999753 3443321 256434699999999999
Q ss_pred CccchHHH-HHHhCC--CCCCceeeCCCccccCCCCEEEeccccc-cC
Q 010217 335 PHAIIKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCAT-VN 378 (515)
Q Consensus 335 ~~p~~~~l-~~~~~~--~~~g~i~vd~~l~t~~~~~IyA~GD~~~-~~ 378 (515)
..|++..+ ++.+++ +.+|+|.||+++|| +.|+|||+|||+. .+
T Consensus 274 ~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~~~ 320 (468)
T 2qae_A 274 RRPFTGGLGLDKINVAKNERGFVKIGDHFET-SIPDVYAIGDVVDKGP 320 (468)
T ss_dssp EEECCTTSCHHHHTCCBCTTSCBCCCTTSBC-SSTTEEECGGGBSSSC
T ss_pred cccCCCCCCchhcCCccCCCCCEeECCCccc-CCCCEEEeeccCCCCC
Confidence 57877332 677777 56789999999998 9999999999998 44
No 29
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=100.00 E-value=4e-35 Score=305.28 Aligned_cols=269 Identities=23% Similarity=0.331 Sum_probs=201.6
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccC---------------------cccccccc---
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCG---------------------TVEARSIV--- 113 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g---------------------~~~~~~~~--- 113 (515)
.+||+|||||+||++||..|++.|++|+|||+++.+|+++....+.+. ..+...+.
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFSTVQDRK 83 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHHHHHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHHHHHHHH
Confidence 479999999999999999999999999999998888876432222110 00100111
Q ss_pred ---------cchHHHHhhcCceEEEEEeEEEEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCCCCCCC
Q 010217 114 ---------EPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVE 184 (515)
Q Consensus 114 ---------~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ipG~~ 184 (515)
..+..++.+.+++ +..+++..++.....|...++ ...++.||+||||||+.|+.|++||.+
T Consensus 84 ~~~~~l~~~~~~~~~~~~~~v~--~~~g~v~~id~~~~~V~~~~g--------~~~~~~~d~lviAtG~~p~~p~i~G~~ 153 (466)
T 3l8k_A 84 DYVQELRFKQHKRNMSQYETLT--FYKGYVKIKDPTHVIVKTDEG--------KEIEAETRYMIIASGAETAKLRLPGVE 153 (466)
T ss_dssp HHHHHHHHHHHHHHHTTCTTEE--EESEEEEEEETTEEEEEETTS--------CEEEEEEEEEEECCCEEECCCCCTTGG
T ss_pred HhheeccccchHHHHHHhCCCE--EEEeEEEEecCCeEEEEcCCC--------cEEEEecCEEEECCCCCccCCCCCCcc
Confidence 2233444556655 667789999976444444322 222399999999999999999999975
Q ss_pred CccccccChhHHHHHHHHHHHHHHhcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEE
Q 010217 185 ENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKIT 264 (515)
Q Consensus 185 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vt 264 (515)
. +.+.+++..++. .+. ..+++++|||+|++|+|+|..|.++ +.+|+
T Consensus 154 -~---~~t~~~~~~~~~---------~l~-------~~~~~vvViGgG~~g~e~A~~l~~~--------------g~~Vt 199 (466)
T 3l8k_A 154 -Y---CLTSDDIFGYKT---------SFR-------KLPQDMVIIGAGYIGLEIASIFRLM--------------GVQTH 199 (466)
T ss_dssp -G---SBCHHHHHSTTC---------SCC-------SCCSEEEEECCSHHHHHHHHHHHHT--------------TCEEE
T ss_pred -c---eEeHHHHHHHHH---------HHh-------hCCCeEEEECCCHHHHHHHHHHHHc--------------CCEEE
Confidence 2 333333321111 111 1356999999999999999999986 68999
Q ss_pred EEeccccccccc-cHHHHHHHHHHhhcCCeEEEcCcEEEEEeC---CeEEEEecC-CCceEEEecCeEEEccCCCCccch
Q 010217 265 LLEAADHILNMF-DKRITAFAEEKFSRDGIDVKLGSMVVKVTD---KEIFTKVRG-NGETSSMPYGMVVWSTGIAPHAII 339 (515)
Q Consensus 265 lv~~~~~~l~~~-~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~---~~v~~~~~~-~G~~~~i~~D~vi~a~G~~~~p~~ 339 (515)
++++.+++++.+ ++++.+.+++.++ |++++++.|++++. +++.+.... +|+..++++|.||+|+| ..|++
T Consensus 200 lv~~~~~~l~~~~d~~~~~~l~~~l~---v~i~~~~~v~~i~~~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G--~~p~~ 274 (466)
T 3l8k_A 200 IIEMLDRALITLEDQDIVNTLLSILK---LNIKFNSPVTEVKKIKDDEYEVIYSTKDGSKKSIFTNSVVLAAG--RRPVI 274 (466)
T ss_dssp EECSSSSSCTTSCCHHHHHHHHHHHC---CCEECSCCEEEEEEEETTEEEEEECCTTSCCEEEEESCEEECCC--EEECC
T ss_pred EEEeCCcCCCCCCCHHHHHHHHhcCE---EEEEECCEEEEEEEcCCCcEEEEEEecCCceEEEEcCEEEECcC--CCccc
Confidence 999999999988 9999999988887 99999999999975 555544322 57655699999999999 57887
Q ss_pred HHH-HHHhCC--CCCCceeeCCCccccCCCCEEEeccccccC
Q 010217 340 KDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCATVN 378 (515)
Q Consensus 340 ~~l-~~~~~~--~~~g~i~vd~~l~t~~~~~IyA~GD~~~~~ 378 (515)
. | ++.+++ +.+| |.||+++|| +.|+|||+|||+..+
T Consensus 275 ~-l~l~~~gl~~~~~G-i~vd~~~~t-~~~~Iya~GD~~~~~ 313 (466)
T 3l8k_A 275 P-EGAREIGLSISKTG-IVVDETMKT-NIPNVFATGDANGLA 313 (466)
T ss_dssp C-TTTGGGTCCBCSSS-BCCCTTCBC-SSTTEEECGGGTCSC
T ss_pred c-cchhhcCceeCCCC-EeECCCccC-CCCCEEEEEecCCCC
Confidence 5 6 677777 5678 999999998 999999999999864
No 30
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=100.00 E-value=1.5e-34 Score=301.87 Aligned_cols=272 Identities=18% Similarity=0.261 Sum_probs=200.3
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhc----------------------cCcc------c
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVT----------------------CGTV------E 108 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~----------------------~g~~------~ 108 (515)
+.+||+|||||+||++||..|++.|++|+|||+++.+++.+....+. .+.. +
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 84 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSEVRLN 84 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEESCEEEC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccCCCccC
Confidence 45899999999999999999999999999999998777653211100 0110 0
Q ss_pred cccc-----------ccchHHHHhhcCceEEEEEeEEEEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCC
Q 010217 109 ARSI-----------VEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (515)
Q Consensus 109 ~~~~-----------~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~ 177 (515)
...+ ...+..++.+.++++ ..+++..++.+ .+.+... +++..++.||+||+|||++|+.
T Consensus 85 ~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~--~~g~~~~~~~~--~~~v~~~------~gg~~~~~~d~lViAtGs~p~~ 154 (474)
T 1zmd_A 85 LDKMMEQKSTAVKALTGGIAHLFKQNKVVH--VNGYGKITGKN--QVTATKA------DGGTQVIDTKNILIATGSEVTP 154 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEE--EESEEEEEETT--EEEEECT------TSCEEEEEEEEEEECCCEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEEEEEEecCC--EEEEEec------CCCcEEEEeCEEEECCCCCCCC
Confidence 0011 111245566778774 55667777754 4444321 1112379999999999999999
Q ss_pred CCCCCCCCccccccChhHHHHHHHHHHHHHHhcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCccc
Q 010217 178 FNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKV 257 (515)
Q Consensus 178 ~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~ 257 (515)
|++||.+... +.+.+++.. +. ..+++++|||+|++|+|+|..|.++
T Consensus 155 p~i~g~~~~~--v~t~~~~~~-------------~~-------~~~~~vvViGgG~~g~E~A~~l~~~------------ 200 (474)
T 1zmd_A 155 FPGITIDEDT--IVSSTGALS-------------LK-------KVPEKMVVIGAGVIGVELGSVWQRL------------ 200 (474)
T ss_dssp CTTCCCCSSS--EECHHHHTT-------------CS-------SCCSEEEEECCSHHHHHHHHHHHHT------------
T ss_pred CCCCCCCcCc--EEcHHHHhh-------------cc-------ccCceEEEECCCHHHHHHHHHHHHc------------
Confidence 9999975321 123222211 11 1346999999999999999999886
Q ss_pred CCCcEEEEEeccccccc-cccHHHHHHHHHHhhcCCeEEEcCcEEEEEeCC--e-EEEEe----cCCCceEEEecCeEEE
Q 010217 258 KDSVKITLLEAADHILN-MFDKRITAFAEEKFSRDGIDVKLGSMVVKVTDK--E-IFTKV----RGNGETSSMPYGMVVW 329 (515)
Q Consensus 258 ~~~~~Vtlv~~~~~~l~-~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~--~-v~~~~----~~~G~~~~i~~D~vi~ 329 (515)
+.+|+++++.+++++ .+++++.+.+.+.+++.||+++++++|++++.+ + +.+.. ..+++ ++++|.||+
T Consensus 201 --g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~--~i~~D~vv~ 276 (474)
T 1zmd_A 201 --GADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAE--VITCDVLLV 276 (474)
T ss_dssp --TCEEEEECSSSSSSCSSCCHHHHHHHHHHHHHTTCEEECSEEEEEEEECTTSCEEEEEEETTSCCCE--EEEESEEEE
T ss_pred --CCEEEEEeccCccCCcccCHHHHHHHHHHHHHCCCEEEeCceEEEEEEcCCceEEEEEEecCCCCce--EEEcCEEEE
Confidence 689999999999999 899999999999999999999999999999753 3 54432 12344 599999999
Q ss_pred ccCCCCccchHHH-HHHhCC--CCCCceeeCCCccccCCCCEEEeccccccCc
Q 010217 330 STGIAPHAIIKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCATVNQ 379 (515)
Q Consensus 330 a~G~~~~p~~~~l-~~~~~~--~~~g~i~vd~~l~t~~~~~IyA~GD~~~~~~ 379 (515)
|+| ..|++..+ ++.+++ +.+|+|.||+++|| +.|+|||+|||+..+.
T Consensus 277 a~G--~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~~~ 326 (474)
T 1zmd_A 277 CIG--RRPFTKNLGLEELGIELDPRGRIPVNTRFQT-KIPNIYAIGDVVAGPM 326 (474)
T ss_dssp CSC--EEECCTTSSHHHHTCCCCTTSCCCCCTTCBC-SSTTEEECGGGSSSCC
T ss_pred CcC--CCcCCCcCCchhcCCccCCCCCEEECcCCcc-CCCCEEEeeecCCCCc
Confidence 999 57887333 677777 56789999999998 9999999999998653
No 31
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=100.00 E-value=2.6e-34 Score=302.63 Aligned_cols=284 Identities=20% Similarity=0.221 Sum_probs=200.0
Q ss_pred CCCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCC--------CCccCCccchhc--------------------cCc-
Q 010217 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN--------YFAFTPLLPSVT--------------------CGT- 106 (515)
Q Consensus 56 ~~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~--------~~~~~~~~~~~~--------------------~g~- 106 (515)
...+||+||||||||++||..|++.|++|+|||+++ .+++++....+. .+.
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g~~ 109 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWK 109 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcCcc
Confidence 346899999999999999999999999999999854 455543211110 010
Q ss_pred ------cccccccc-----------chHHHHhhcCceEEEEEeEEEEEecCCCEEEEeeCCccCCCCCceEEeecCEEEE
Q 010217 107 ------VEARSIVE-----------PVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVI 169 (515)
Q Consensus 107 ------~~~~~~~~-----------~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lvi 169 (515)
.+...+.. .+...++..+++ ++.+++..+++.. +.+.+. +++.+++.||+|||
T Consensus 110 ~~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~--~i~g~a~~~d~~~--v~v~~~------~g~~~~i~~d~lVi 179 (519)
T 3qfa_A 110 VEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVV--YENAYGQFIGPHR--IKATNN------KGKEKIYSAERFLI 179 (519)
T ss_dssp CCSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EECSEEEEEETTE--EEEECT------TCCCCEEEEEEEEE
T ss_pred cCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEEEEEEeeCCE--EEEEcC------CCCEEEEECCEEEE
Confidence 01111111 122344556755 6788898998764 444331 22234799999999
Q ss_pred ccCCCcCCCCCCCCCCccccccChhHHHHHHHHHHHHHHhcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHH
Q 010217 170 AMGARANTFNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDED 249 (515)
Q Consensus 170 AtG~~~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~ 249 (515)
|||++|+.|++||..+.++ +.+++. .++. .+++++|||+|++|+|+|..|.++
T Consensus 180 ATGs~p~~p~i~G~~~~~~---t~~~~~-------------~l~~-------~~~~vvVIGgG~ig~E~A~~l~~~---- 232 (519)
T 3qfa_A 180 ATGERPRYLGIPGDKEYCI---SSDDLF-------------SLPY-------CPGKTLVVGASYVALECAGFLAGI---- 232 (519)
T ss_dssp CCCEEECCCCCTTHHHHCB---CHHHHT-------------TCSS-------CCCSEEEECCSHHHHHHHHHHHHT----
T ss_pred ECCCCcCCCCCCCccCceE---cHHHHh-------------hhhh-------cCCeEEEECCcHHHHHHHHHHHHc----
Confidence 9999999999999654322 221111 1222 345899999999999999999986
Q ss_pred HHhhCcccCCCcEEEEEeccccccccccHHHHHHHHHHhhcCCeEEEcCcEEEEEeC------CeEEEEe-cCCC-ceEE
Q 010217 250 LFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTD------KEIFTKV-RGNG-ETSS 321 (515)
Q Consensus 250 ~~~~~p~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~------~~v~~~~-~~~G-~~~~ 321 (515)
+.+|+++++ +.+++.+++++.+.+.+.|++.||++++++.+.++.. +.+.+.. ..+| +..+
T Consensus 233 ----------G~~Vtlv~~-~~~l~~~d~~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~ 301 (519)
T 3qfa_A 233 ----------GLDVTVMVR-SILLRGFDQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIE 301 (519)
T ss_dssp ----------TCCEEEEES-SCSSTTSCHHHHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEE
T ss_pred ----------CCeEEEEec-ccccccCCHHHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEE
Confidence 689999998 4788899999999999999999999999988777753 2333321 2344 4346
Q ss_pred EecCeEEEccCCCCccchHHH-HHHhCC--C-CCCceeeCCCccccCCCCEEEeccccccCccchHHHHHHHH
Q 010217 322 MPYGMVVWSTGIAPHAIIKDF-MKQVGQ--T-NRRALATDEWLRVEGSDSIYALGDCATVNQRRVMEDIAAIF 390 (515)
Q Consensus 322 i~~D~vi~a~G~~~~p~~~~l-~~~~~~--~-~~g~i~vd~~l~t~~~~~IyA~GD~~~~~~~~~~~~~~~~~ 390 (515)
+++|.||+|+| ..|++..| ++.+++ + .+|+|.||+++|| +.|+|||+|||+.........+..++.
T Consensus 302 ~~~D~vi~a~G--~~p~~~~l~l~~~gl~~~~~~G~I~Vd~~~~T-s~~~IyA~GD~~~g~~~~~~~A~~~g~ 371 (519)
T 3qfa_A 302 GEYNTVMLAIG--RDACTRKIGLETVGVKINEKTGKIPVTDEEQT-NVPYIYAIGDILEDKVELTPVAIQAGR 371 (519)
T ss_dssp EEESEEEECSC--EEESCSSSCSTTTTCCCCTTTCCBCCCTTSBC-SSTTEEECGGGBSSSCCCHHHHHHHHH
T ss_pred EECCEEEEecC--CcccCCCCChhhcCcEEcCCCCeEeeCCCCcc-CCCCEEEEEeccCCCCccHHHHHHHHH
Confidence 89999999999 57887444 566776 4 4789999999998 999999999999543333333433333
No 32
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=3.4e-34 Score=300.34 Aligned_cols=284 Identities=21% Similarity=0.301 Sum_probs=202.9
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhcc---------------------Ccc------cc
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTC---------------------GTV------EA 109 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~---------------------g~~------~~ 109 (515)
+.+||+||||||||++||..|++.|++|+|||+++.+|+++....+.+ +.. +.
T Consensus 24 ~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 103 (491)
T 3urh_A 24 MAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVANPKLNL 103 (491)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECCCCEECH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccCCCccCH
Confidence 458999999999999999999999999999999888877532211100 000 00
Q ss_pred cc-----------cccchHHHHhhcCceEEEEEeEEEEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCC
Q 010217 110 RS-----------IVEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (515)
Q Consensus 110 ~~-----------~~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~ 178 (515)
.. +...+...+.+.+++ ++.+++..++.. .+.+... +++...+.||+||||||+.| +
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~g~~~~~~~~--~~~v~~~------~g~~~~~~~d~lViATGs~p--~ 171 (491)
T 3urh_A 104 QKMMAHKDATVKSNVDGVSFLFKKNKID--GFQGTGKVLGQG--KVSVTNE------KGEEQVLEAKNVVIATGSDV--A 171 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCE--EEESEEEECSSS--EEEEECT------TSCEEEEECSEEEECCCEEC--C
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEEEEEEecCC--EEEEEeC------CCceEEEEeCEEEEccCCCC--C
Confidence 00 011123445566765 567777777654 4544432 22235899999999999986 4
Q ss_pred CCCCCCC--ccccccChhHHHHHHHHHHHHHHhcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcc
Q 010217 179 NTPGVEE--NCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPK 256 (515)
Q Consensus 179 ~ipG~~~--~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~ 256 (515)
++||..+ ....+.+..+.. .+. ..+++++|||+|++|+|+|..|.++
T Consensus 172 ~ipg~~~~~~~~~~~~~~~~~-------------~~~-------~~~~~vvViGgG~~g~E~A~~l~~~----------- 220 (491)
T 3urh_A 172 GIPGVEVAFDEKTIVSSTGAL-------------ALE-------KVPASMIVVGGGVIGLELGSVWARL----------- 220 (491)
T ss_dssp CBTTBCCCCCSSSEECHHHHT-------------SCS-------SCCSEEEEECCSHHHHHHHHHHHHH-----------
T ss_pred CCCCcccccCCeeEEehhHhh-------------hhh-------hcCCeEEEECCCHHHHHHHHHHHHc-----------
Confidence 5777641 111122222211 111 2456999999999999999999987
Q ss_pred cCCCcEEEEEeccccccccccHHHHHHHHHHhhcCCeEEEcCcEEEEEeC--CeEEE--EecCCCceEEEecCeEEEccC
Q 010217 257 VKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFT--KVRGNGETSSMPYGMVVWSTG 332 (515)
Q Consensus 257 ~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~--~~v~~--~~~~~G~~~~i~~D~vi~a~G 332 (515)
+.+|+++++.+++++.+++++.+.+.+.+++.||++++++++.+++. +.+.+ .+..+|+..++++|.||+|+|
T Consensus 221 ---g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G 297 (491)
T 3urh_A 221 ---GAKVTVVEFLDTILGGMDGEVAKQLQRMLTKQGIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATG 297 (491)
T ss_dssp ---TCEEEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTSCCCEEEEESEEEECCC
T ss_pred ---CCEEEEEeccccccccCCHHHHHHHHHHHHhCCCEEEECCeEEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEeeC
Confidence 68999999999999999999999999999999999999999999974 33333 322236444699999999999
Q ss_pred CCCccchHHH-HHHhCC--CCCCceeeCCCccccCCCCEEEeccccccCccchHHHHHHHH
Q 010217 333 IAPHAIIKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCATVNQRRVMEDIAAIF 390 (515)
Q Consensus 333 ~~~~p~~~~l-~~~~~~--~~~g~i~vd~~l~t~~~~~IyA~GD~~~~~~~~~~~~~~~~~ 390 (515)
..|++..+ ++..++ +.+|+|.||+++|| +.|+|||+|||+..+. ....+..++.
T Consensus 298 --~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~~~-~~~~A~~~g~ 354 (491)
T 3urh_A 298 --RKPSTDGLGLAKAGVVLDSRGRVEIDRHFQT-SIAGVYAIGDVVRGPM-LAHKAEDEGV 354 (491)
T ss_dssp --CEECCTTSCHHHHTCCBCTTSCBCCCTTCBC-SSTTEEECGGGSSSCC-CHHHHHHHHH
T ss_pred --CccCCCccCchhcCceECCCCCEeECCCCCC-CCCCEEEEEecCCCcc-chhHHHHHHH
Confidence 57888444 777777 67899999999998 9999999999997653 3344444444
No 33
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=100.00 E-value=9.8e-34 Score=281.09 Aligned_cols=281 Identities=14% Similarity=0.156 Sum_probs=199.2
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchh---ccC---cccccccccchHHHHhhcCceEEEE
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSV---TCG---TVEARSIVEPVRNIVRKKNVDICFW 130 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~---~~g---~~~~~~~~~~~~~~~~~~~i~v~~~ 130 (515)
..++|+|||||+||+++|..|++.|++|+|||++ .+++....... .++ .....++...+.+.+.+.++++ .
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~--~ 83 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQAEKFGAKV--E 83 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHHHHHTTCEE--E
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCcccccccccccCCCCCCCCCHHHHHHHHHHHHHHcCCEE--E
Confidence 3579999999999999999999999999999998 44443221100 011 1122345556677788888775 3
Q ss_pred EeEEEEEecC--CC---EEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCCCCCCCCcc-ccccChhHHHHHHHHHH
Q 010217 131 EAECFKIDAE--NK---KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENC-NFLKEVEDAQRIRRNVI 204 (515)
Q Consensus 131 ~~~v~~id~~--~~---~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ipG~~~~~-~~~~~~~~a~~~~~~~~ 204 (515)
.++|..++.. ++ .|.+.++. .+.||+||+|||+.|..|++||.++.. ..+...... ..
T Consensus 84 ~~~v~~i~~~~~~~~~~~v~~~~g~----------~~~~~~vv~AtG~~~~~~~i~g~~~~~~~~~~~~~~~----~~-- 147 (325)
T 2q7v_A 84 MDEVQGVQHDATSHPYPFTVRGYNG----------EYRAKAVILATGADPRKLGIPGEDNFWGKGVSTCATC----DG-- 147 (325)
T ss_dssp ECCEEEEEECTTSSSCCEEEEESSC----------EEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHHH----HG--
T ss_pred eeeEEEEEeccCCCceEEEEECCCC----------EEEeCEEEECcCCCcCCCCCCChhhccCceEEEeccC----CH--
Confidence 4789999876 43 45554332 799999999999999999999975321 011111100 00
Q ss_pred HHHHhcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccccccccHHHHHHH
Q 010217 205 ESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFA 284 (515)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~ 284 (515)
....+++|+|||+|++|+|+|..|.++ +.+|+++++.+.+.. ++.+ .
T Consensus 148 --------------~~~~~~~v~VvG~G~~g~e~A~~l~~~--------------g~~Vtlv~~~~~~~~--~~~~---~ 194 (325)
T 2q7v_A 148 --------------FFYKGKKVVVIGGGDAAVEEGMFLTKF--------------ADEVTVIHRRDTLRA--NKVA---Q 194 (325)
T ss_dssp --------------GGGTTCEEEEECCSHHHHHHHHHHTTT--------------CSEEEEECSSSSCCS--CHHH---H
T ss_pred --------------HHcCCCEEEEECCCHHHHHHHHHHHhc--------------CCEEEEEeCCCcCCc--chHH---H
Confidence 012457999999999999999999875 689999999887642 3332 2
Q ss_pred HHHhhcCCeEEEcCcEEEEEeCC----eEEEEecCCCceEEEecCeEEEccCCCCccchHHHHHHh-CCCCCCceeeCCC
Q 010217 285 EEKFSRDGIDVKLGSMVVKVTDK----EIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQV-GQTNRRALATDEW 359 (515)
Q Consensus 285 ~~~l~~~gV~v~~~~~v~~i~~~----~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~-~~~~~g~i~vd~~ 359 (515)
.+.+++.||+++++++++++..+ ++.+....+|+..+++||.||+|+| ..|++ .+++.+ .++.+|+|.||++
T Consensus 195 ~~l~~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G--~~p~~-~~l~~~~~~~~~g~i~vd~~ 271 (325)
T 2q7v_A 195 ARAFANPKMKFIWDTAVEEIQGADSVSGVKLRNLKTGEVSELATDGVFIFIG--HVPNT-AFVKDTVSLRDDGYVDVRDE 271 (325)
T ss_dssp HHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECSC--EEESC-GGGTTTSCBCTTSCBCCBTT
T ss_pred HHHHhcCCceEecCCceEEEccCCcEEEEEEEECCCCcEEEEEcCEEEEccC--CCCCh-HHHhhhcccCCCccEecCCC
Confidence 23334579999999999999764 3444433467755799999999999 57776 455544 2367899999999
Q ss_pred ccccCCCCEEEeccccccCccchHHHHHHHHHhh
Q 010217 360 LRVEGSDSIYALGDCATVNQRRVMEDIAAIFSKA 393 (515)
Q Consensus 360 l~t~~~~~IyA~GD~~~~~~~~~~~~~~~~~~~a 393 (515)
++| +.|+|||+|||+..+......++.++..++
T Consensus 272 ~~t-~~~~vya~GD~~~~~~~~~~~A~~~g~~aa 304 (325)
T 2q7v_A 272 IYT-NIPMLFAAGDVSDYIYRQLATSVGAGTRAA 304 (325)
T ss_dssp TBC-SSTTEEECSTTTCSSCCCHHHHHHHHHHHH
T ss_pred Ccc-CCCCEEEeecccCccHHHHHHHHHHHHHHH
Confidence 998 999999999999875555666666655444
No 34
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=100.00 E-value=1.9e-34 Score=300.30 Aligned_cols=271 Identities=21% Similarity=0.326 Sum_probs=197.8
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCcc----chh-----------------ccCc-----ccccc
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLL----PSV-----------------TCGT-----VEARS 111 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~----~~~-----------------~~g~-----~~~~~ 111 (515)
.+||+|||||+||+++|..|++.|++|+|||++ .+++.... |.. ..+. .+...
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 81 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISGEVTFDYGI 81 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEEECCEECHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCCCCCccCHHH
Confidence 379999999999999999999999999999998 44433211 100 0000 00000
Q ss_pred -----------cccchHHHHhhcCceEEEEEeEEEEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCCC
Q 010217 112 -----------IVEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNT 180 (515)
Q Consensus 112 -----------~~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~i 180 (515)
+...+.+.+++.++++ ..+++..++ .+.+.+... +++..++.||+||+|||+.|..|++
T Consensus 82 ~~~~~~~~~~~l~~~l~~~~~~~gv~~--~~g~~~~id--~~~v~V~~~------~G~~~~~~~d~lViAtG~~~~~~~~ 151 (464)
T 2a8x_A 82 AYDRSRKVAEGRVAGVHFLMKKNKITE--IHGYGTFAD--ANTLLVDLN------DGGTESVTFDNAIIATGSSTRLVPG 151 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEE--ECEEEEESS--SSEEEEEET------TSCCEEEEEEEEEECCCEEECCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEE--EEeEEEEec--CCeEEEEeC------CCceEEEEcCEEEECCCCCCCCCCC
Confidence 1111345566778775 344444454 345555432 1212479999999999999999989
Q ss_pred CCCCCccccccChhHHHHHHHHHHHHHHhcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCC
Q 010217 181 PGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDS 260 (515)
Q Consensus 181 pG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~ 260 (515)
+|.+.. +.+.+++.. +. ..+++++|||+|++|+|+|..|.++ +
T Consensus 152 ~g~~~~---~~~~~~~~~-------------~~-------~~~~~vvViGgG~~g~E~A~~l~~~--------------g 194 (464)
T 2a8x_A 152 TSLSAN---VVTYEEQIL-------------SR-------ELPKSIIIAGAGAIGMEFGYVLKNY--------------G 194 (464)
T ss_dssp CCCBTT---EECHHHHHT-------------CS-------SCCSEEEEECCSHHHHHHHHHHHHT--------------T
T ss_pred CCCCce---EEecHHHhh-------------cc-------ccCCeEEEECCcHHHHHHHHHHHHc--------------C
Confidence 987543 233333221 11 1346999999999999999999986 6
Q ss_pred cEEEEEeccccccccccHHHHHHHHHHhhcCCeEEEcCcEEEEEeCC--eEEEEecCCCceEEEecCeEEEccCCCCccc
Q 010217 261 VKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTDK--EIFTKVRGNGETSSMPYGMVVWSTGIAPHAI 338 (515)
Q Consensus 261 ~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~--~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~ 338 (515)
.+|+++++.+++++.+++++.+.+.+.+++.||++++++.|++++.+ .+.+....+|+..++++|.||+|+| ..|+
T Consensus 195 ~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G--~~p~ 272 (464)
T 2a8x_A 195 VDVTIVEFLPRALPNEDADVSKEIEKQFKKLGVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIG--FAPN 272 (464)
T ss_dssp CEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEECSCEEEEEEECSSCEEEEEESSSCEEEEEESEEEECSC--EEEC
T ss_pred CeEEEEEcCCccccccCHHHHHHHHHHHHHcCCEEEeCcEEEEEEEcCCeEEEEEEcCCceEEEEcCEEEECCC--CCcc
Confidence 89999999999999999999999999999999999999999999753 3544432256444699999999999 5788
Q ss_pred hHHH-HHHhCC--CCCCceeeCCCccccCCCCEEEeccccccCc
Q 010217 339 IKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCATVNQ 379 (515)
Q Consensus 339 ~~~l-~~~~~~--~~~g~i~vd~~l~t~~~~~IyA~GD~~~~~~ 379 (515)
+..+ ++.+++ +.+|+|.||+++|| +.|+|||+|||+..+.
T Consensus 273 ~~~l~~~~~gl~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~~~ 315 (464)
T 2a8x_A 273 VEGYGLDKAGVALTDRKAIGVDDYMRT-NVGHIYAIGDVNGLLQ 315 (464)
T ss_dssp CSSSCHHHHTCCBCTTSSBCCCTTSBC-SSTTEEECGGGGCSSC
T ss_pred CCCCCchhcCCccCCCCCEeECcCCcc-CCCCEEEeECcCCCcc
Confidence 7333 677777 56789999999998 9999999999998643
No 35
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.6e-34 Score=299.93 Aligned_cols=270 Identities=21% Similarity=0.360 Sum_probs=197.2
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhc--------------------cCc------ccccc
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVT--------------------CGT------VEARS 111 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~--------------------~g~------~~~~~ 111 (515)
++||+|||||+||++||..|++.|++|+|||++ .+++++....+. .+. .+...
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 81 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENVTIDFAK 81 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSCEECHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCCccCHHH
Confidence 479999999999999999999999999999998 555432111000 010 00001
Q ss_pred -----------cccchHHHHhhcCceEEEEEeEEEEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCCC
Q 010217 112 -----------IVEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNT 180 (515)
Q Consensus 112 -----------~~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~i 180 (515)
+...+...+.+.++++ ..+++..++.+ .+.+.... + ..++.||+||||||++|..|++
T Consensus 82 ~~~~~~~~~~~l~~~~~~~~~~~gv~~--~~g~~~~id~~--~v~V~~~~------G-~~~i~~d~lViATGs~p~~~~~ 150 (455)
T 1ebd_A 82 VQEWKASVVKKLTGGVEGLLKGNKVEI--VKGEAYFVDAN--TVRVVNGD------S-AQTYTFKNAIIATGSRPIELPN 150 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCEE--EESEEEEEETT--EEEEEETT------E-EEEEECSEEEECCCEEECCBTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEE--EEEEEEEccCC--eEEEEeCC------C-cEEEEeCEEEEecCCCCCCCCC
Confidence 1112345566778774 45566667754 45444311 1 1379999999999999999989
Q ss_pred CCCCCccccccChhHHHHHHHHHHHHHHhcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCC
Q 010217 181 PGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDS 260 (515)
Q Consensus 181 pG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~ 260 (515)
+|.+.. +.+..++.. +. ..+++++|||+|++|+|+|..|.++ +
T Consensus 151 ~g~~~~---v~~~~~~~~-------------~~-------~~~~~vvViGgG~~g~e~A~~l~~~--------------g 193 (455)
T 1ebd_A 151 FKFSNR---ILDSTGALN-------------LG-------EVPKSLVVIGGGYIGIELGTAYANF--------------G 193 (455)
T ss_dssp BCCCSS---EECHHHHHT-------------CS-------SCCSEEEEECCSHHHHHHHHHHHHT--------------T
T ss_pred CCccce---EecHHHHhc-------------cc-------cCCCeEEEECCCHHHHHHHHHHHHc--------------C
Confidence 887543 233333221 11 1346999999999999999999986 6
Q ss_pred cEEEEEeccccccccccHHHHHHHHHHhhcCCeEEEcCcEEEEEeC--CeEEEEecCCCceEEEecCeEEEccCCCCccc
Q 010217 261 VKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGIAPHAI 338 (515)
Q Consensus 261 ~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~--~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~ 338 (515)
.+|+++++.+++++.+++++.+.+.+.+++.||+++++++|++++. +.+.+....+|+..++++|.||+|+| ..|+
T Consensus 194 ~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G--~~p~ 271 (455)
T 1ebd_A 194 TKVTILEGAGEILSGFEKQMAAIIKKRLKKKGVEVVTNALAKGAEEREDGVTVTYEANGETKTIDADYVLVTVG--RRPN 271 (455)
T ss_dssp CEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSC--EEES
T ss_pred CcEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEEeCCceeEEEcCEEEECcC--CCcc
Confidence 8999999999999999999999999999999999999999999974 33444321234434699999999999 5777
Q ss_pred hHHH-HHHhCC--CCCCceeeCCCccccCCCCEEEeccccccCc
Q 010217 339 IKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCATVNQ 379 (515)
Q Consensus 339 ~~~l-~~~~~~--~~~g~i~vd~~l~t~~~~~IyA~GD~~~~~~ 379 (515)
+..+ ++.+++ +.+|+|.||+++|| +.|+|||+|||+..+.
T Consensus 272 ~~~l~~~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~~~ 314 (455)
T 1ebd_A 272 TDELGLEQIGIKMTNRGLIEVDQQCRT-SVPNIFAIGDIVPGPA 314 (455)
T ss_dssp CSSSSTTTTTCCBCTTSCBCCCTTCBC-SSTTEEECGGGSSSCC
T ss_pred cCcCChhhcCCccCCCCCEeeCCCccc-CCCCEEEEeccCCCcc
Confidence 7332 566676 56789999999998 9999999999998643
No 36
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=100.00 E-value=1.4e-34 Score=302.93 Aligned_cols=271 Identities=22% Similarity=0.299 Sum_probs=199.5
Q ss_pred CCeEEEECCcHHHHHHHHhccC-CCCeEEEEc--------CCCCCccCCccchhc--------------------cCc--
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNN-PSYDVQVIS--------PRNYFAFTPLLPSVT--------------------CGT-- 106 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~-~g~~V~vie--------~~~~~~~~~~~~~~~--------------------~g~-- 106 (515)
.+||+|||||+||++||..|++ .|++|+||| +...+|+++....+. .+.
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~ 86 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFGWEF 86 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred ccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHhHHHhcCccc
Confidence 5799999999999999999999 999999999 344556543221110 010
Q ss_pred ------cccccccc-----------chHHHHhhc-CceEEEEEeEEEEEecCCCEEEEeeCCccCCCC---CceEEeecC
Q 010217 107 ------VEARSIVE-----------PVRNIVRKK-NVDICFWEAECFKIDAENKKVYCRSSQNTNLNG---KEEFCMDYD 165 (515)
Q Consensus 107 ------~~~~~~~~-----------~~~~~~~~~-~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~---~~~~~~~~d 165 (515)
.+...+.. .+...+++. +++ ++.+++..++. +.|.+.+.. + .....+.||
T Consensus 87 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~--~~~g~~~~i~~--~~v~v~~~~-----~~~~~~~~~~~~d 157 (495)
T 2wpf_A 87 DGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLD--FFLGWGSLESK--NVVVVRETA-----DPKSAVKERLQAD 157 (495)
T ss_dssp CGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEE--EEESEEEEEET--TEEEEESSS-----STTSCEEEEEEEE
T ss_pred CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeE--EEEeEEEEeeC--CEEEEeecC-----CccCCCCeEEEcC
Confidence 01111111 122334556 755 56777888874 577775211 1 001379999
Q ss_pred EEEEccCCCcCCCCCCCCCCccccccChhHHHHHHHHHHHHHHhcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHh
Q 010217 166 YLVIAMGARANTFNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDF 245 (515)
Q Consensus 166 ~lviAtG~~~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~ 245 (515)
+||||||++|+.|++||.+ .++ +.+++. .+. ..+++++|||+|++|+|+|..|.++
T Consensus 158 ~lViATGs~p~~p~i~G~~-~~~---~~~~~~-------------~~~-------~~~~~vvViGgG~ig~E~A~~l~~~ 213 (495)
T 2wpf_A 158 HILLATGSWPQMPAIPGIE-HCI---SSNEAF-------------YLP-------EPPRRVLTVGGGFISVEFAGIFNAY 213 (495)
T ss_dssp EEEECCCEEECCCCCTTGG-GCE---EHHHHT-------------TCS-------SCCSEEEEECSSHHHHHHHHHHHHH
T ss_pred EEEEeCCCCcCCCCCCCcc-ccc---cHHHHH-------------hhh-------hcCCeEEEECCCHHHHHHHHHHHhh
Confidence 9999999999999999973 222 222211 111 1346999999999999999999876
Q ss_pred hHHHHHhhCcccCCCcEEEEEeccccccccccHHHHHHHHHHhhcCCeEEEcCcEEEEEeCC--e-EEEEecCCCceEEE
Q 010217 246 VDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTDK--E-IFTKVRGNGETSSM 322 (515)
Q Consensus 246 ~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~--~-v~~~~~~~G~~~~i 322 (515)
. | ++.+|+++++.+++++.+++++.+.+.+.+++.||++++++.|.+++.+ + +.+. +.+|+ ++
T Consensus 214 ~--------~---~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~-~~~G~--~i 279 (495)
T 2wpf_A 214 K--------P---PGGKVTLCYRNNLILRGFDETIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVT-FESGK--TL 279 (495)
T ss_dssp C--------C---TTCEEEEEESSSSSCTTSCHHHHHHHHHHHHHTTCEEEESCCEEEEEECTTSCEEEE-ETTSC--EE
T ss_pred C--------C---CCCeEEEEEcCCccccccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCceEEEE-ECCCc--EE
Confidence 1 1 1579999999999999999999999999999999999999999999753 3 4443 45776 49
Q ss_pred ecCeEEEccCCCCccchHHH-HHHhCC--CCCCceeeCCCccccCCCCEEEeccccccC
Q 010217 323 PYGMVVWSTGIAPHAIIKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCATVN 378 (515)
Q Consensus 323 ~~D~vi~a~G~~~~p~~~~l-~~~~~~--~~~g~i~vd~~l~t~~~~~IyA~GD~~~~~ 378 (515)
++|.||+|+| ..|++..| ++.+++ +.+|+|.||+++|| +.|+|||+|||+..+
T Consensus 280 ~~D~vv~a~G--~~p~~~~L~l~~~gl~~~~~G~i~Vd~~~~t-~~~~IyA~GD~~~~~ 335 (495)
T 2wpf_A 280 DVDVVMMAIG--RIPRTNDLQLGNVGVKLTPKGGVQVDEFSRT-NVPNIYAIGDITDRL 335 (495)
T ss_dssp EESEEEECSC--EEECCGGGTGGGTTCCBCTTSSBCCCTTCBC-SSTTEEECGGGGCSC
T ss_pred EcCEEEECCC--CcccccccchhhcCccCCCCCCEEECCCCcc-CCCCEEEEeccCCCc
Confidence 9999999999 57888545 677777 56889999999998 999999999999754
No 37
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=100.00 E-value=1.6e-34 Score=299.33 Aligned_cols=261 Identities=20% Similarity=0.310 Sum_probs=197.2
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCcc----chh-----------c------cCc------cccc
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLL----PSV-----------T------CGT------VEAR 110 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~----~~~-----------~------~g~------~~~~ 110 (515)
++||+|||||+||++||..|++.|++|+|||++ .+++++.. |.. . .+. .+..
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~~~~~~~~ 82 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMYGQKCALIEAK-ELGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINKFNWE 82 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEEEEEECHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC-CCCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCCCCccCHH
Confidence 579999999999999999999999999999997 45554221 110 0 000 0000
Q ss_pred cc-----------ccchHHHHhhcCceEEEEEeEEEEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCC
Q 010217 111 SI-----------VEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFN 179 (515)
Q Consensus 111 ~~-----------~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ 179 (515)
.+ ...+...+.+.+++ ++.+++..++. +.|.+ ++ ..+.||+||||||++|..|+
T Consensus 83 ~l~~~~~~~~~~~~~~~~~~~~~~~v~--~~~g~~~~i~~--~~v~~-~g----------~~~~~d~lviAtGs~p~~p~ 147 (450)
T 1ges_A 83 TLIASRTAYIDRIHTSYENVLGKNNVD--VIKGFARFVDA--KTLEV-NG----------ETITADHILIATGGRPSHPD 147 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCE--EEESCCEEEET--TEEEE-TT----------EEEEEEEEEECCCEEECCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEeEEEEecC--CEEEE-CC----------EEEEeCEEEECCCCCCCCCC
Confidence 01 11123344667766 55667777775 46666 22 17999999999999999999
Q ss_pred CCCCCCccccccChhHHHHHHHHHHHHHHhcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCC
Q 010217 180 TPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKD 259 (515)
Q Consensus 180 ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~ 259 (515)
+||.+ .+ .+.++...+ . ..+++++|||+|++|+|+|..|.++
T Consensus 148 i~g~~-~~---~~~~~~~~~-------------~-------~~~~~vvViGgG~~g~e~A~~l~~~-------------- 189 (450)
T 1ges_A 148 IPGVE-YG---IDSDGFFAL-------------P-------ALPERVAVVGAGYIGVELGGVINGL-------------- 189 (450)
T ss_dssp STTGG-GS---BCHHHHHHC-------------S-------SCCSEEEEECCSHHHHHHHHHHHHT--------------
T ss_pred CCCcc-ce---ecHHHhhhh-------------h-------hcCCeEEEECCCHHHHHHHHHHHhc--------------
Confidence 99873 22 233222211 1 1346999999999999999999886
Q ss_pred CcEEEEEeccccccccccHHHHHHHHHHhhcCCeEEEcCcEEEEEeCC--e-EEEEecCCCceEEEecCeEEEccCCCCc
Q 010217 260 SVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTDK--E-IFTKVRGNGETSSMPYGMVVWSTGIAPH 336 (515)
Q Consensus 260 ~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~--~-v~~~~~~~G~~~~i~~D~vi~a~G~~~~ 336 (515)
+.+|+++++.+++++.+++++.+.+.+.+++.||++++++.|++++.+ + +.+. +.+|+. +++|.||+|+| ..
T Consensus 190 g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~-~~~g~~--i~~D~vv~a~G--~~ 264 (450)
T 1ges_A 190 GAKTHLFEMFDAPLPSFDPMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLE-LEDGRS--ETVDCLIWAIG--RE 264 (450)
T ss_dssp TCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHSCEEECSCCEEEEEECTTSCEEEE-ETTSCE--EEESEEEECSC--EE
T ss_pred CCEEEEEEeCCchhhhhhHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcEEEEE-ECCCcE--EEcCEEEECCC--CC
Confidence 689999999999999999999999999999999999999999999753 3 4444 356764 99999999999 57
Q ss_pred cchHHH-HHHhCC--CCCCceeeCCCccccCCCCEEEeccccccC
Q 010217 337 AIIKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCATVN 378 (515)
Q Consensus 337 p~~~~l-~~~~~~--~~~g~i~vd~~l~t~~~~~IyA~GD~~~~~ 378 (515)
|++..| ++.+++ +.+|+|.||+++|| +.|+|||+|||+..+
T Consensus 265 p~~~~l~~~~~gl~~~~~g~i~vd~~~~t-~~~~IyA~GD~~~~~ 308 (450)
T 1ges_A 265 PANDNINLEAAGVKTNEKGYIVVDKYQNT-NIEGIYAVGDNTGAV 308 (450)
T ss_dssp ESCTTSCHHHHTCCBCTTSCBCCCTTSBC-SSTTEEECSGGGTSC
T ss_pred cCCCCCCchhcCceECCCCCEeECCCCcc-CCCCEEEEeccCCCC
Confidence 887545 677777 56899999999998 999999999999754
No 38
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=100.00 E-value=6.5e-34 Score=297.75 Aligned_cols=277 Identities=15% Similarity=0.256 Sum_probs=206.0
Q ss_pred CCCCeEEEECCcHHHHHHHHhccCC--CCeEEEEcCCCCCccCC-ccc-hhccCcc---------------------ccc
Q 010217 56 IKKKKVVVLGTGWAGTSFLKNLNNP--SYDVQVISPRNYFAFTP-LLP-SVTCGTV---------------------EAR 110 (515)
Q Consensus 56 ~~~~~VvIIGgG~AGlsaA~~L~~~--g~~V~vie~~~~~~~~~-~~~-~~~~g~~---------------------~~~ 110 (515)
...++|||||||+||++||..|++. +.+|+|||+++.++|.. .+. .+..+.. .+.
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~r~~lsk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQPP 88 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBCSGGGGTGGGCC--CTHHHHCEEECTTSCEEESBSSCG
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCHHhhcCCccchhhcccccccccccccccccch
Confidence 3468999999999999999988744 89999999998776542 111 1111100 000
Q ss_pred ccccchHHHH--hhcCceEEEEEeEEEEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCCCCCC-----
Q 010217 111 SIVEPVRNIV--RKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGV----- 183 (515)
Q Consensus 111 ~~~~~~~~~~--~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ipG~----- 183 (515)
........+. .+.++++ +...+|+.||...+.|.+.++. ++.||+||||||++|+.++++|.
T Consensus 89 ~~~~~~~~l~~~~~~gv~~-~~g~~v~~id~~~~~V~~~~g~----------~i~yd~lviATGs~p~~~~~~~~~~~~~ 157 (493)
T 1m6i_A 89 SFYVSAQDLPHIENGGVAV-LTGKKVVQLDVRDNMVKLNDGS----------QITYEKCLIATGGTPRSLSAIDRAGAEV 157 (493)
T ss_dssp GGSBCTTTTTTSTTCEEEE-EETCCEEEEEGGGTEEEETTSC----------EEEEEEEEECCCEEECCCHHHHTSCHHH
T ss_pred HhhcchhhhhhhhcCCeEE-EcCCEEEEEECCCCEEEECCCC----------EEECCEEEECCCCCCCCCCCcccccccc
Confidence 0000001111 2345554 2345899999988899886543 79999999999999988776653
Q ss_pred CCccccccChhHHHHHHHHHHHHHHhcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEE
Q 010217 184 EENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKI 263 (515)
Q Consensus 184 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~V 263 (515)
.+.++++++.+++..++..+ ..+++|+|||+|++|+|+|..|.+.+++ .+.+|
T Consensus 158 ~~~v~~~~~~~d~~~l~~~~-----------------~~~~~vvViGgG~iG~E~A~~l~~~~~~----------~g~~V 210 (493)
T 1m6i_A 158 KSRTTLFRKIGDFRSLEKIS-----------------REVKSITIIGGGFLGSELACALGRKARA----------LGTEV 210 (493)
T ss_dssp HHTEEECCSHHHHHHHHHHH-----------------HHCSEEEEECCSHHHHHHHHHHHHHHHH----------HTCEE
T ss_pred cCceEEEcCHHHHHHHHHHh-----------------hcCCeEEEECCCHHHHHHHHHHHhhhhh----------cCCEE
Confidence 13566788888888776654 2567999999999999999999876532 16799
Q ss_pred EEEecccccccc-ccHHHHHHHHHHhhcCCeEEEcCcEEEEEeC--CeEEEEecCCCceEEEecCeEEEccCCCCccchH
Q 010217 264 TLLEAADHILNM-FDKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIK 340 (515)
Q Consensus 264 tlv~~~~~~l~~-~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~--~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~ 340 (515)
+++++.+.+++. +++.+.+.+.+.+++.||++++++.|++++. +.+.+. +.+|++ ++||.||+|+| ..|++
T Consensus 211 ~~v~~~~~~~~~~l~~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~~~~~v~-l~dG~~--i~aD~Vv~a~G--~~pn~- 284 (493)
T 1m6i_A 211 IQLFPEKGNMGKILPEYLSNWTMEKVRREGVKVMPNAIVQSVGVSSGKLLIK-LKDGRK--VETDHIVAAVG--LEPNV- 284 (493)
T ss_dssp EEECSSSSTTTTTSCHHHHHHHHHHHHTTTCEEECSCCEEEEEEETTEEEEE-ETTSCE--EEESEEEECCC--EEECC-
T ss_pred EEEecCcccccccCCHHHHHHHHHHHHhcCCEEEeCCEEEEEEecCCeEEEE-ECCCCE--EECCEEEECCC--CCccH-
Confidence 999988776653 6788999999999999999999999999963 344433 467764 99999999999 57877
Q ss_pred HHHHHhCC--CC-CCceeeCCCccccCCCCEEEeccccccC
Q 010217 341 DFMKQVGQ--TN-RRALATDEWLRVEGSDSIYALGDCATVN 378 (515)
Q Consensus 341 ~l~~~~~~--~~-~g~i~vd~~l~t~~~~~IyA~GD~~~~~ 378 (515)
.+++.+++ +. +|+|.||++||| .|+|||+|||+..+
T Consensus 285 ~l~~~~gl~~~~~~ggi~Vd~~l~t--~~~IyA~GD~a~~~ 323 (493)
T 1m6i_A 285 ELAKTGGLEIDSDFGGFRVNAELQA--RSNIWVAGDAACFY 323 (493)
T ss_dssp TTHHHHTCCBCTTTCSEECCTTCEE--ETTEEECGGGEEEE
T ss_pred HHHHHcCCccccCCCcEEECCCccc--CCCeeEeeeeEecc
Confidence 57788887 33 589999999997 49999999999854
No 39
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=100.00 E-value=6.7e-34 Score=299.94 Aligned_cols=269 Identities=19% Similarity=0.285 Sum_probs=202.6
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCcc----chhc--------------------cCccc----
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLL----PSVT--------------------CGTVE---- 108 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~----~~~~--------------------~g~~~---- 108 (515)
..+||||||||+||++||.+|++.|++|+|||+++.+++.+.. |... .....
T Consensus 42 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 121 (523)
T 1mo9_A 42 REYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMTEKVVG 121 (523)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCCTTCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHHHhhhhh
Confidence 4689999999999999999999999999999999866654321 1110 00000
Q ss_pred ccccccch----H---HHH-----hhcCceEEEEEeEEEEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcC
Q 010217 109 ARSIVEPV----R---NIV-----RKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARAN 176 (515)
Q Consensus 109 ~~~~~~~~----~---~~~-----~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~ 176 (515)
.+++...+ . .++ .+.++++ +..+++..++. +.|.+. + ..+.||+||||||+.|.
T Consensus 122 ~~~~~~~l~~~~~~~~~~~~~~~~~~~gv~~-~~~~~v~~i~~--~~v~~~-g----------~~~~~d~lViATGs~p~ 187 (523)
T 1mo9_A 122 IKEVVDLFRAGRNGPHGIMNFQSKEQLNLEY-ILNCPAKVIDN--HTVEAA-G----------KVFKAKNLILAVGAGPG 187 (523)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHTSCCCE-EESSCCEEEET--TEEEET-T----------EEEEBSCEEECCCEECC
T ss_pred HHHHHHHHHhhhhhhhhhhhhcccccCCcEE-EEeeEEEEeeC--CEEEEC-C----------EEEEeCEEEECCCCCCC
Confidence 11122222 2 455 6678775 22778888885 466653 2 17999999999999999
Q ss_pred CCCCCCCCCc-cccccChhHHHHHHHHHHHHHHhcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCc
Q 010217 177 TFNTPGVEEN-CNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYP 255 (515)
Q Consensus 177 ~~~ipG~~~~-~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p 255 (515)
.|++||.+.. ++ +..++. . . +... .+++++|||+|++|+|+|..+.++
T Consensus 188 ~p~i~G~~~~~v~---~~~~~~---~------~---l~~~------~g~~vvViGgG~~g~E~A~~l~~~---------- 236 (523)
T 1mo9_A 188 TLDVPGVNAKGVF---DHATLV---E------E---LDYE------PGSTVVVVGGSKTAVEYGCFFNAT---------- 236 (523)
T ss_dssp CCCSTTTTSBTEE---EHHHHH---H------H---CCSC------CCSEEEEECCSHHHHHHHHHHHHT----------
T ss_pred CCCCCCcccCcEe---eHHHHH---H------H---HHhc------CCCeEEEECCCHHHHHHHHHHHHc----------
Confidence 9999997642 32 222221 0 0 1111 226999999999999999999886
Q ss_pred ccCCCcEEEEEeccccccccccHHHHHHHHHHhhcCCeEEEcCcEEEEEeC--Ce----EEEEecCCCceEEEecCeEEE
Q 010217 256 KVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KE----IFTKVRGNGETSSMPYGMVVW 329 (515)
Q Consensus 256 ~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~--~~----v~~~~~~~G~~~~i~~D~vi~ 329 (515)
+.+|+++++.+++++.+++++.+.+.+.+++.||+++++++|++++. ++ +.+. +.+|+ .+++||.||+
T Consensus 237 ----G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~-~~~G~-~~i~aD~Vv~ 310 (523)
T 1mo9_A 237 ----GRRTVMLVRTEPLKLIKDNETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAM-TPNGE-MRIETDFVFL 310 (523)
T ss_dssp ----TCEEEEECSSCTTTTCCSHHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEE-ETTEE-EEEECSCEEE
T ss_pred ----CCeEEEEEecCcccccccHHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEE-ECCCc-EEEEcCEEEE
Confidence 68999999999999999999999999999999999999999999975 44 4443 35675 2499999999
Q ss_pred ccCCCCccchHHHHHHhCC--CCCCceeeCCCccccCCCCEEEeccccccCc
Q 010217 330 STGIAPHAIIKDFMKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCATVNQ 379 (515)
Q Consensus 330 a~G~~~~p~~~~l~~~~~~--~~~g~i~vd~~l~t~~~~~IyA~GD~~~~~~ 379 (515)
|+| ..|++..+++.+++ +.+|+|.||+++|| +.|+|||+|||+..+.
T Consensus 311 A~G--~~p~~~~~l~~~gl~~~~~G~i~Vd~~~~t-~~~~IyA~GD~~~~~~ 359 (523)
T 1mo9_A 311 GLG--EQPRSAELAKILGLDLGPKGEVLVNEYLQT-SVPNVYAVGDLIGGPM 359 (523)
T ss_dssp CCC--CEECCHHHHHHHTCCBCTTSCBCCCTTSBC-SSTTEEECGGGGCSSC
T ss_pred CcC--CccCCccCHHHcCCccCCCCCEEECCCCcc-CCCCEEEEeecCCCcc
Confidence 999 57877226778887 56899999999998 9999999999998653
No 40
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=1.1e-33 Score=281.84 Aligned_cols=280 Identities=17% Similarity=0.176 Sum_probs=204.4
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCc--cchh----ccC--cccccccccchHHHHhhcCceEE
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPL--LPSV----TCG--TVEARSIVEPVRNIVRKKNVDIC 128 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~--~~~~----~~g--~~~~~~~~~~~~~~~~~~~i~v~ 128 (515)
.+++|+|||||+||+++|..|++.|++|+|||+++.+++... .+.. ..+ .....++...+.+.+.++++++
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~- 82 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLVEQVAPFNPVY- 82 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHGGGCCEE-
T ss_pred CcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHHHHHHHHcCCEE-
Confidence 357999999999999999999999999999999987765431 1110 011 1122345555666777778776
Q ss_pred EEEeEEEEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCC---CcCCCCCCCCCCc----ccc-ccChhHHHHHH
Q 010217 129 FWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGA---RANTFNTPGVEEN----CNF-LKEVEDAQRIR 200 (515)
Q Consensus 129 ~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~---~~~~~~ipG~~~~----~~~-~~~~~~a~~~~ 200 (515)
+.+++|..++...+.+.+.... + .++.||+||+|||+ .|..+++||.+.. +++ +++.
T Consensus 83 ~~~~~v~~i~~~~~~~~v~~~~-----g---~~~~~~~lv~AtG~~~~~p~~~~i~g~~~~~~~~~~~~~~~~------- 147 (335)
T 2zbw_A 83 SLGERAETLEREGDLFKVTTSQ-----G---NAYTAKAVIIAAGVGAFEPRRIGAPGEREFEGRGVYYAVKSK------- 147 (335)
T ss_dssp EESCCEEEEEEETTEEEEEETT-----S---CEEEEEEEEECCTTSEEEECCCCCTTTTTTBTTTEESSCSCG-------
T ss_pred EeCCEEEEEEECCCEEEEEECC-----C---CEEEeCEEEECCCCCCCCCCCCCCCChhhccCcEEEEecCch-------
Confidence 3577899998776555554321 1 17899999999999 5777788886431 111 1111
Q ss_pred HHHHHHHHhcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccccccccHHH
Q 010217 201 RNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRI 280 (515)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~~~~~~~ 280 (515)
+...+++|+|||+|++|+|+|..|.+. +.+|+++++.+.+++. +..
T Consensus 148 ------------------~~~~~~~v~viG~G~~g~e~a~~l~~~--------------g~~V~~v~~~~~~~~~--~~~ 193 (335)
T 2zbw_A 148 ------------------AEFQGKRVLIVGGGDSAVDWALNLLDT--------------ARRITLIHRRPQFRAH--EAS 193 (335)
T ss_dssp ------------------GGGTTCEEEEECSSHHHHHHHHHTTTT--------------SSEEEEECSSSSCCSC--HHH
T ss_pred ------------------hhcCCCEEEEECCCHHHHHHHHHHHhh--------------CCEEEEEEcCCccCcc--HHH
Confidence 012467999999999999999999875 6799999999887553 466
Q ss_pred HHHHHHHhhcCCeEEEcCcEEEEEeCC----eEEEEecCCCceEEEecCeEEEccCCCCccchHHHHHHhCC-CCCCcee
Q 010217 281 TAFAEEKFSRDGIDVKLGSMVVKVTDK----EIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ-TNRRALA 355 (515)
Q Consensus 281 ~~~~~~~l~~~gV~v~~~~~v~~i~~~----~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~~~-~~~g~i~ 355 (515)
.+.+.+.+++.||++++++.+.+++.+ .+.+....+|+..++++|.||+|+| ..|+. .+++.+++ ..+|+|.
T Consensus 194 ~~~l~~~l~~~gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G--~~p~~-~~l~~~~~~~~~g~i~ 270 (335)
T 2zbw_A 194 VKELMKAHEEGRLEVLTPYELRRVEGDERVRWAVVFHNQTQEELALEVDAVLILAG--YITKL-GPLANWGLALEKNKIK 270 (335)
T ss_dssp HHHHHHHHHTTSSEEETTEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCC--EEEEC-GGGGGSCCCEETTEEE
T ss_pred HHHHHhccccCCeEEecCCcceeEccCCCeeEEEEEECCCCceEEEecCEEEEeec--CCCCc-hHhhhcceeccCCeee
Confidence 778888899999999999999999764 3444433367555699999999999 57776 56777777 2478999
Q ss_pred eCCCccccCCCCEEEeccccccCc--cchHHHHHHHH
Q 010217 356 TDEWLRVEGSDSIYALGDCATVNQ--RRVMEDIAAIF 390 (515)
Q Consensus 356 vd~~l~t~~~~~IyA~GD~~~~~~--~~~~~~~~~~~ 390 (515)
||+++|| +.|+|||+|||+..+. .....++.++.
T Consensus 271 vd~~~~t-~~~~vya~GD~~~~~~~~~~~~~A~~~g~ 306 (335)
T 2zbw_A 271 VDTTMAT-SIPGVYACGDIVTYPGKLPLIVLGFGEAA 306 (335)
T ss_dssp CCTTCBC-SSTTEEECSTTEECTTCCCCHHHHHHHHH
T ss_pred eCCCCCC-CCCCEEEeccccccCcchhhhhhhHHHHH
Confidence 9999998 9999999999997642 33344444443
No 41
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=100.00 E-value=3.1e-34 Score=285.86 Aligned_cols=291 Identities=14% Similarity=0.174 Sum_probs=205.0
Q ss_pred CCCCCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCC----CCccCCccch----hc--cCcccccccccchHHHHhhc
Q 010217 54 MGIKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN----YFAFTPLLPS----VT--CGTVEARSIVEPVRNIVRKK 123 (515)
Q Consensus 54 ~~~~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~----~~~~~~~~~~----~~--~g~~~~~~~~~~~~~~~~~~ 123 (515)
...+++||+|||||+||+++|..|++.|++|+|||+.+ ..++...... ++ .......++...+...+.+.
T Consensus 18 ~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (338)
T 3itj_A 18 GSHVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKF 97 (338)
T ss_dssp ---CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHT
T ss_pred CCCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHHHHHHHHHHHHc
Confidence 44567899999999999999999999999999999954 3343221110 10 11122345666777888888
Q ss_pred CceEEEEEeEEEEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCCCCCCCCcc-ccccChhHHHHHHHH
Q 010217 124 NVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENC-NFLKEVEDAQRIRRN 202 (515)
Q Consensus 124 ~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ipG~~~~~-~~~~~~~~a~~~~~~ 202 (515)
++++ ...+|+.++...+.+.+.... ......+.||+||+|||+.|+.|++||.+... ..+.... .....
T Consensus 98 gv~i--~~~~v~~i~~~~~~~~v~~~~-----~~~~~~~~~d~vvlAtG~~~~~~~~~g~~~~~~~~~~~~~---~~~~~ 167 (338)
T 3itj_A 98 GTEI--ITETVSKVDLSSKPFKLWTEF-----NEDAEPVTTDAIILATGASAKRMHLPGEETYWQKGISACA---VCDGA 167 (338)
T ss_dssp TCEE--ECSCEEEEECSSSSEEEEETT-----CSSSCCEEEEEEEECCCEEECCCCCTTHHHHBTTTEESCH---HHHTT
T ss_pred CCEE--EEeEEEEEEEcCCEEEEEEEe-----cCCCcEEEeCEEEECcCCCcCCCCCCCchhccCccEEEch---hcccc
Confidence 9875 344599999988877765421 01112789999999999999999999964210 0111111 00000
Q ss_pred HHHHHHhcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccccccccHHHHH
Q 010217 203 VIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITA 282 (515)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~~~~~~~~~ 282 (515)
+ ....+++++|||+|++|+|+|..|.++ +.+|+++++.+.+++ ..
T Consensus 168 ---------~------~~~~~~~v~vvG~G~~g~e~a~~l~~~--------------g~~v~~v~~~~~~~~------~~ 212 (338)
T 3itj_A 168 ---------V------PIFRNKPLAVIGGGDSACEEAQFLTKY--------------GSKVFMLVRKDHLRA------ST 212 (338)
T ss_dssp ---------S------GGGTTSEEEEECSSHHHHHHHHHHTTT--------------SSEEEEECSSSSCCS------CH
T ss_pred ---------h------hhcCCCEEEEECCCHHHHHHHHHHHhc--------------CCEEEEEEcCCccCC------CH
Confidence 0 013567999999999999999999875 689999999988765 23
Q ss_pred HHHHHhhc-CCeEEEcCcEEEEEeCCe-----EEEEecCCCceEEEecCeEEEccCCCCccchHHHHHHhCC--CCCCce
Q 010217 283 FAEEKFSR-DGIDVKLGSMVVKVTDKE-----IFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ--TNRRAL 354 (515)
Q Consensus 283 ~~~~~l~~-~gV~v~~~~~v~~i~~~~-----v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~~~--~~~g~i 354 (515)
.+.+.+.+ .||++++++.+++++.++ +.+.+..+|+..+++||.||+|+|+ .|+. .+++. ++ +.+|+|
T Consensus 213 ~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~--~p~~-~~~~~-~l~~~~~G~i 288 (338)
T 3itj_A 213 IMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGH--TPAT-KIVAG-QVDTDEAGYI 288 (338)
T ss_dssp HHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEETTTTEEEEEECSEEEECSCE--EECC-GGGBT-TBCBCTTSCB
T ss_pred HHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEEEECCCCceEEEEeCEEEEEeCC--CCCh-hHhhC-ceEecCCCcE
Confidence 33455544 599999999999997543 5555544566567999999999994 6766 44443 54 678999
Q ss_pred ee-CCCccccCCCCEEEeccccccCccchHHHHHHHHHhhc
Q 010217 355 AT-DEWLRVEGSDSIYALGDCATVNQRRVMEDIAAIFSKAD 394 (515)
Q Consensus 355 ~v-d~~l~t~~~~~IyA~GD~~~~~~~~~~~~~~~~~~~a~ 394 (515)
.| |++++| +.|+|||+|||+..+...+..++.++..+|.
T Consensus 289 ~v~~~~~~t-~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~ 328 (338)
T 3itj_A 289 KTVPGSSLT-SVPGFFAAGDVQDSKYRQAITSAGSGCMAAL 328 (338)
T ss_dssp CCCTTSSBC-SSTTEEECGGGGCSSCCCHHHHHHHHHHHHH
T ss_pred EEcCccccc-CCCCEEEeeccCCCCccceeeehhhhHHHHH
Confidence 85 888997 9999999999998766667777777665553
No 42
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=100.00 E-value=2e-34 Score=301.78 Aligned_cols=283 Identities=18% Similarity=0.251 Sum_probs=202.4
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcC--------CCCCccCCccchhc--------------------cC---
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISP--------RNYFAFTPLLPSVT--------------------CG--- 105 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~--------~~~~~~~~~~~~~~--------------------~g--- 105 (515)
..+||+||||||||++||..|++.|++|+|||+ ...+|++++...+. .+
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g~~~ 84 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGWEV 84 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcCccc
Confidence 468999999999999999999999999999997 34456543221110 01
Q ss_pred ----cccccccccc-----------hHHHHhhcCceEEEEEeEEEEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEc
Q 010217 106 ----TVEARSIVEP-----------VRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIA 170 (515)
Q Consensus 106 ----~~~~~~~~~~-----------~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviA 170 (515)
..+...+... +...+.+.+++ ++.+++..+++. .+.+... +++..++.||+||||
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~--~i~g~~~~~~~~--~v~v~~~------~g~~~~~~~d~lViA 154 (488)
T 3dgz_A 85 AQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVK--YFNIKASFVDEH--TVRGVDK------GGKATLLSAEHIVIA 154 (488)
T ss_dssp CSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EECCEEEESSSS--EEEEECT------TSCEEEEEEEEEEEC
T ss_pred CCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEEEEEEccCC--eEEEEeC------CCceEEEECCEEEEc
Confidence 0111111111 22344556765 678888887765 4444432 222358999999999
Q ss_pred cCCCcCCCC-CCCCCCccccccChhHHHHHHHHHHHHHHhcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHH
Q 010217 171 MGARANTFN-TPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDED 249 (515)
Q Consensus 171 tG~~~~~~~-ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~ 249 (515)
||+.|..|+ +||.++.++ +.++. + .+.. .+++++|||+|++|+|+|..|.++
T Consensus 155 TGs~p~~p~~i~G~~~~~~---~~~~~----------~---~~~~-------~~~~vvViGgG~ig~E~A~~l~~~---- 207 (488)
T 3dgz_A 155 TGGRPRYPTQVKGALEYGI---TSDDI----------F---WLKE-------SPGKTLVVGASYVALECAGFLTGI---- 207 (488)
T ss_dssp CCEEECCCSSCBTHHHHCB---CHHHH----------T---TCSS-------CCCSEEEECCSHHHHHHHHHHHHT----
T ss_pred CCCCCCCCCCCCCcccccC---cHHHH----------H---hhhh-------cCCeEEEECCCHHHHHHHHHHHHc----
Confidence 999999998 999754322 11111 1 1221 345999999999999999999986
Q ss_pred HHhhCcccCCCcEEEEEeccccccccccHHHHHHHHHHhhcCCeEEEcCcEEEEEeC---Ce--EEEEecCCCceEEEec
Q 010217 250 LFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTD---KE--IFTKVRGNGETSSMPY 324 (515)
Q Consensus 250 ~~~~~p~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~---~~--v~~~~~~~G~~~~i~~ 324 (515)
+.+|+++++. .+++.+++++.+.+.+.|++.||++++++.+.+++. +. +.+.+..+|+..++++
T Consensus 208 ----------g~~Vtlv~~~-~~l~~~d~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~ 276 (488)
T 3dgz_A 208 ----------GLDTTVMMRS-IPLRGFDQQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTF 276 (488)
T ss_dssp ----------TCCEEEEESS-CSSTTSCHHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEE
T ss_pred ----------CCceEEEEcC-cccccCCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEEC
Confidence 6899999986 578889999999999999999999999999999963 22 3333333466556899
Q ss_pred CeEEEccCCCCccchHHH-HHHhCC--C-CCCceeeCCCccccCCCCEEEeccccccCccchHHHHHHHH
Q 010217 325 GMVVWSTGIAPHAIIKDF-MKQVGQ--T-NRRALATDEWLRVEGSDSIYALGDCATVNQRRVMEDIAAIF 390 (515)
Q Consensus 325 D~vi~a~G~~~~p~~~~l-~~~~~~--~-~~g~i~vd~~l~t~~~~~IyA~GD~~~~~~~~~~~~~~~~~ 390 (515)
|.||+|+| ..|++..+ ++.+++ + .+|+|.||+++|| +.|+|||+|||+.........+..++.
T Consensus 277 D~vi~a~G--~~p~~~~l~l~~~g~~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~~~~~~~~A~~~g~ 343 (488)
T 3dgz_A 277 DTVLWAIG--RVPETRTLNLEKAGISTNPKNQKIIVDAQEAT-SVPHIYAIGDVAEGRPELTPTAIKAGK 343 (488)
T ss_dssp SEEEECSC--EEESCGGGTGGGGTCCBCSSSCCBCCCTTSBC-SSTTEEECGGGBTTCCCCHHHHHHHHH
T ss_pred CEEEEccc--CCcccCcCCccccCcEecCCCCeEeECCCCcc-CCCCEEEeEEecCCCCcchhHHHHHHH
Confidence 99999999 57888544 567777 5 6799999999998 999999999998543333334444443
No 43
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=100.00 E-value=6.3e-34 Score=280.73 Aligned_cols=279 Identities=15% Similarity=0.097 Sum_probs=201.9
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEE-EcCCCCCccCCccchhc---cC---cccccccccchHHHHhhcCceEEE
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQV-ISPRNYFAFTPLLPSVT---CG---TVEARSIVEPVRNIVRKKNVDICF 129 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~v-ie~~~~~~~~~~~~~~~---~g---~~~~~~~~~~~~~~~~~~~i~v~~ 129 (515)
.++||+|||||+||++||..|++.|++|+| +|+ +.+++........ ++ .....++..++..++.+.++++
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-- 79 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITSSSEIENYPGVAQVMDGISFMAPWSEQCMRFGLKH-- 79 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHTTTCCEE--
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeeeeceeccCCCCCCCCCHHHHHHHHHHHHHHcCcEE--
Confidence 468999999999999999999999999999 998 4555432211111 11 1233456667778888888775
Q ss_pred EEeEEEEEecCC--CEEE--EeeCCccCCCCCceEEeecCEEEEccCCCcCCCCCCCCCCcc-ccccChhHHHHHHHHHH
Q 010217 130 WEAECFKIDAEN--KKVY--CRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENC-NFLKEVEDAQRIRRNVI 204 (515)
Q Consensus 130 ~~~~v~~id~~~--~~v~--~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ipG~~~~~-~~~~~~~~a~~~~~~~~ 204 (515)
...+|..+ .+. +.+. +.. ++ ++.||+||+|||+.|+.|++||..... ..+...... .
T Consensus 80 ~~~~v~~i-~~~~~~~~~v~~~~--------~~--~~~~d~lvlAtG~~~~~~~~~g~~~~~~~~~~~~~~~---~---- 141 (315)
T 3r9u_A 80 EMVGVEQI-LKNSDGSFTIKLEG--------GK--TELAKAVIVCTGSAPKKAGFKGEDEFFGKGVSTCATC---D---- 141 (315)
T ss_dssp ECCCEEEE-EECTTSCEEEEETT--------SC--EEEEEEEEECCCEEECCCCCBTTTTTBTTTEESCHHH---H----
T ss_pred EEEEEEEE-ecCCCCcEEEEEec--------CC--EEEeCEEEEeeCCCCCCCCCCChhhcCCCeEEeeecc---c----
Confidence 34588888 544 4455 432 11 789999999999999999999976411 111111110 0
Q ss_pred HHHHhcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccccccccHHHHHHH
Q 010217 205 ESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFA 284 (515)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~ 284 (515)
.....+++++|||+|++|+|+|..|.++ +.+|+++++.+.+.. ++. .+
T Consensus 142 -------------~~~~~~~~v~viG~g~~~~e~a~~l~~~--------------g~~v~~~~~~~~~~~--~~~---~~ 189 (315)
T 3r9u_A 142 -------------GFFYKNKEVAVLGGGDTALEEALYLANI--------------CSKIYLIHRRDEFRA--APS---TV 189 (315)
T ss_dssp -------------GGGGTTSEEEEECCBHHHHHHHHHHHTT--------------SSEEEEECSSSSCBS--CHH---HH
T ss_pred -------------ccccCcCEEEEECCCHHHHHHHHHHHhh--------------CCEEEEEEeCCCCCC--CHH---HH
Confidence 0012567999999999999999999875 689999999887632 332 33
Q ss_pred HHHhhcCCeEEEcCcEEEEEeCCe-----EEEEecCCCceEEEecCeEEEccCCCCccchHHHHHH---hC-C--CCCCc
Q 010217 285 EEKFSRDGIDVKLGSMVVKVTDKE-----IFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQ---VG-Q--TNRRA 353 (515)
Q Consensus 285 ~~~l~~~gV~v~~~~~v~~i~~~~-----v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~---~~-~--~~~g~ 353 (515)
.+.+++.||++++++.+.++..++ +.+. ..+|+..++++|.||+|+| ..|+. .+++. ++ + +.+|+
T Consensus 190 ~~~~~~~gv~~~~~~~v~~i~~~~~~~~~v~~~-~~~g~~~~~~~D~vv~a~G--~~p~~-~~~~~~~~~g~l~~~~~g~ 265 (315)
T 3r9u_A 190 EKVKKNEKIELITSASVDEVYGDKMGVAGVKVK-LKDGSIRDLNVPGIFTFVG--LNVRN-EILKQDDSKFLCNMEEGGQ 265 (315)
T ss_dssp HHHHHCTTEEEECSCEEEEEEEETTEEEEEEEE-CTTSCEEEECCSCEEECSC--EEECC-GGGBCTTSCBSSCBCTTSC
T ss_pred HHHHhcCCeEEEeCcEEEEEEcCCCcEEEEEEE-cCCCCeEEeecCeEEEEEc--CCCCc-hhhhcccccceeeecCCCc
Confidence 455678999999999999997532 4444 3478766799999999999 46776 45443 43 5 67799
Q ss_pred eeeCCCccccCCCCEEEeccccccCccchHHHHHHHHHhh
Q 010217 354 LATDEWLRVEGSDSIYALGDCATVNQRRVMEDIAAIFSKA 393 (515)
Q Consensus 354 i~vd~~l~t~~~~~IyA~GD~~~~~~~~~~~~~~~~~~~a 393 (515)
|.||+++|| +.|+|||+|||+..+...+..++.++..++
T Consensus 266 i~vd~~~~t-~~~~v~a~GD~~~~~~~~~~~A~~~g~~aa 304 (315)
T 3r9u_A 266 VSVDLKMQT-SVAGLFAAGDLRKDAPKQVICAAGDGAVAA 304 (315)
T ss_dssp BCCCTTCBC-SSTTEEECGGGBTTCCCCHHHHHHHHHHHH
T ss_pred EEeCCCccc-CCCCEEEeecccCCchhhhhhHHhhHHHHH
Confidence 999999998 999999999999766666777777766554
No 44
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=100.00 E-value=2.4e-34 Score=300.89 Aligned_cols=273 Identities=21% Similarity=0.288 Sum_probs=200.1
Q ss_pred CCeEEEECCcHHHHHHHHhccC-CCCeEEEEc--------CCCCCccCCccchhcc--------------------Cc--
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNN-PSYDVQVIS--------PRNYFAFTPLLPSVTC--------------------GT-- 106 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~-~g~~V~vie--------~~~~~~~~~~~~~~~~--------------------g~-- 106 (515)
.+||+|||||+||++||.+|++ .|++|+||| +...+|+++...++.+ +.
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~ 82 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGWEL 82 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEC
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHHhcCccc
Confidence 5799999999999999999999 999999999 3555666532211100 10
Q ss_pred ------ccccccc-----------cchHHHHhhc-CceEEEEEeEEEEEecCCCEEEEeeCCccCCCCCc-eEEeecCEE
Q 010217 107 ------VEARSIV-----------EPVRNIVRKK-NVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKE-EFCMDYDYL 167 (515)
Q Consensus 107 ------~~~~~~~-----------~~~~~~~~~~-~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~-~~~~~~d~l 167 (515)
.+...+. ..+...+++. +++ ++.+++..++. +.+.+.+.. ..+++ ...+.||+|
T Consensus 83 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~--~~~g~~~~i~~--~~v~v~~~~---~~~g~~~~~~~~d~l 155 (490)
T 1fec_A 83 DRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLT--FHQGFGALQDN--HTVLVRESA---DPNSAVLETLDTEYI 155 (490)
T ss_dssp CGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEE--EEESEEEEEET--TEEEEESSS---STTSCEEEEEEEEEE
T ss_pred CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcE--EEEeEEEEeeC--CEEEEEeec---cCCCCceEEEEcCEE
Confidence 0111111 1223345566 755 56777888875 467665200 00110 147999999
Q ss_pred EEccCCCcCCCCCCCCCCccccccChhHHHHHHHHHHHHHHhcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhH
Q 010217 168 VIAMGARANTFNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVD 247 (515)
Q Consensus 168 viAtG~~~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~ 247 (515)
|||||++|..|++||.+ .++ +.+++.. +. ..+++++|||+|++|+|+|..|.++.
T Consensus 156 viAtGs~p~~p~i~g~~-~~~---~~~~~~~-------------~~-------~~~~~vvViGgG~ig~E~A~~l~~~~- 210 (490)
T 1fec_A 156 LLATGSWPQHLGIEGDD-LCI---TSNEAFY-------------LD-------EAPKRALCVGGGYISIEFAGIFNAYK- 210 (490)
T ss_dssp EECCCEEECCCCSBTGG-GCB---CHHHHTT-------------CS-------SCCSEEEEECSSHHHHHHHHHHHHHS-
T ss_pred EEeCCCCCCCCCCCCcc-cee---cHHHHhh-------------hh-------hcCCeEEEECCCHHHHHHHHHHHhhc-
Confidence 99999999999999873 222 2222211 11 13469999999999999999998761
Q ss_pred HHHHhhCcccCCCcEEEEEeccccccccccHHHHHHHHHHhhcCCeEEEcCcEEEEEeCC--e-EEEEecCCCceEEEec
Q 010217 248 EDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTDK--E-IFTKVRGNGETSSMPY 324 (515)
Q Consensus 248 ~~~~~~~p~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~--~-v~~~~~~~G~~~~i~~ 324 (515)
| ++.+|+++++.+++++.+++++.+.+.+.+++.||++++++.|++++.+ + +.+. +.+|+ ++++
T Consensus 211 -------~---~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~-~~~G~--~i~~ 277 (490)
T 1fec_A 211 -------A---RGGQVDLAYRGDMILRGFDSELRKQLTEQLRANGINVRTHENPAKVTKNADGTRHVV-FESGA--EADY 277 (490)
T ss_dssp -------C---TTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTEEEEETCCEEEEEECTTSCEEEE-ETTSC--EEEE
T ss_pred -------c---CcCeEEEEEcCCCcccccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEE-ECCCc--EEEc
Confidence 1 2589999999999999999999999999999999999999999999753 2 4444 45776 4999
Q ss_pred CeEEEccCCCCccchHHH-HHHhCC--CCCCceeeCCCccccCCCCEEEeccccccC
Q 010217 325 GMVVWSTGIAPHAIIKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCATVN 378 (515)
Q Consensus 325 D~vi~a~G~~~~p~~~~l-~~~~~~--~~~g~i~vd~~l~t~~~~~IyA~GD~~~~~ 378 (515)
|.||+|+| ..|++..| ++.+++ +.+|+|.||+++|| +.|+|||+|||+..+
T Consensus 278 D~vv~a~G--~~p~~~~L~l~~~gl~~~~~G~I~Vd~~~~t-~~~~IyA~GD~~~~~ 331 (490)
T 1fec_A 278 DVVMLAIG--RVPRSQTLQLEKAGVEVAKNGAIKVDAYSKT-NVDNIYAIGDVTDRV 331 (490)
T ss_dssp SEEEECSC--EEESCTTSCGGGGTCCBCTTSCBCCCTTCBC-SSTTEEECGGGGCSC
T ss_pred CEEEEccC--CCcCccccCchhcCccCCCCCCEEECCCCcc-CCCCEEEEeccCCCc
Confidence 99999999 57887445 677777 56889999999998 999999999999754
No 45
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=100.00 E-value=1.6e-33 Score=277.53 Aligned_cols=278 Identities=18% Similarity=0.269 Sum_probs=196.9
Q ss_pred CeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCc----cchhcc-CcccccccccchHHHHhhcCceEEEEEeE
Q 010217 59 KKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPL----LPSVTC-GTVEARSIVEPVRNIVRKKNVDICFWEAE 133 (515)
Q Consensus 59 ~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~----~~~~~~-g~~~~~~~~~~~~~~~~~~~i~v~~~~~~ 133 (515)
+||+|||||+||+++|..|++.|++|+|||+. .++... ++.+.. .......+...+...+.+.++++ +...+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~--~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~ 78 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARKGIRTGLMGER--FGGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYDVDV-IDSQS 78 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSS--TTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHTSCEEE-ECSCC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEeCC--CCceeccccccccccCcCCCCHHHHHHHHHHHHHHcCCeE-EccCE
Confidence 68999999999999999999999999999864 333221 111111 11122345556677777788765 23448
Q ss_pred EEEEecCC-----CEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCCCCCCCCcc-ccccChhHHHHHHHHHHHHH
Q 010217 134 CFKIDAEN-----KKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENC-NFLKEVEDAQRIRRNVIESF 207 (515)
Q Consensus 134 v~~id~~~-----~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ipG~~~~~-~~~~~~~~a~~~~~~~~~~~ 207 (515)
|+.++++. ..|.+.++. .+.||+||+|||+.|..|++||.++.. ..+..... +..
T Consensus 79 v~~i~~~~~~~~~~~v~~~~g~----------~~~~~~lv~AtG~~~~~~~~~g~~~~~~~~~~~~~~---~~~------ 139 (310)
T 1fl2_A 79 ASKLIPAAVEGGLHQIETASGA----------VLKARSIIVATGAKWRNMNVPGEDQYRTKGVTYCPH---CDG------ 139 (310)
T ss_dssp EEEEECCSSTTCCEEEEETTSC----------EEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHH---HHG------
T ss_pred EEEEEecccCCceEEEEECCCC----------EEEeCEEEECcCCCcCCCCCCChhhcccceeEEecc---CcH------
Confidence 99998652 244443322 789999999999999988999975321 00111111 000
Q ss_pred HhcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccccccccHHHHHHHHHH
Q 010217 208 EKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEK 287 (515)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~ 287 (515)
....+++|+|||+|++|+|+|..|.++ +.+|+++++.+.+. +++ .+.+.
T Consensus 140 -----------~~~~~~~v~VvG~G~~g~e~A~~l~~~--------------g~~Vtlv~~~~~~~--~~~----~~~~~ 188 (310)
T 1fl2_A 140 -----------PLFKGKRVAVIGGGNSGVEAAIDLAGI--------------VEHVTLLEFAPEMK--ADQ----VLQDK 188 (310)
T ss_dssp -----------GGGBTCEEEEECCSHHHHHHHHHHHTT--------------BSEEEEECSSSSCC--SCH----HHHHH
T ss_pred -----------hhcCCCEEEEECCCHHHHHHHHHHHHh--------------CCEEEEEEeCcccC--ccH----HHHHH
Confidence 113567999999999999999999875 57999999988763 343 33455
Q ss_pred hhc-CCeEEEcCcEEEEEeCC-----eEEEEecCCCceEEEecCeEEEccCCCCccchHHHHHH-hCCCCCCceeeCCCc
Q 010217 288 FSR-DGIDVKLGSMVVKVTDK-----EIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQ-VGQTNRRALATDEWL 360 (515)
Q Consensus 288 l~~-~gV~v~~~~~v~~i~~~-----~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~-~~~~~~g~i~vd~~l 360 (515)
+++ .||+++++++++++.++ .+.+.+..+|+..++++|.||+|+| ..|++ .+++. +.++.+|+|.||+++
T Consensus 189 l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G--~~p~~-~~l~~~l~~~~~g~i~vd~~~ 265 (310)
T 1fl2_A 189 LRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIG--LLPNT-NWLEGAVERNRMGEIIIDAKC 265 (310)
T ss_dssp HHTCTTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSC--EEESC-GGGTTTSCBCTTSCBCCCTTC
T ss_pred HhhCCCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEEcCEEEEeeC--CccCc-hHHhccccccCCCcEEcCCCC
Confidence 666 69999999999999754 3445443457666799999999999 57776 45443 333678999999999
Q ss_pred cccCCCCEEEeccccccCccchHHHHHHHHHhh
Q 010217 361 RVEGSDSIYALGDCATVNQRRVMEDIAAIFSKA 393 (515)
Q Consensus 361 ~t~~~~~IyA~GD~~~~~~~~~~~~~~~~~~~a 393 (515)
|| +.|+|||+|||+..+...+..++.++..++
T Consensus 266 ~t-~~~~vya~GD~~~~~~~~~~~A~~~g~~aa 297 (310)
T 1fl2_A 266 ET-NVKGVFAAGDCTTVPYKQIIIATGEGAKAS 297 (310)
T ss_dssp BC-SSTTEEECSTTBSCSSCCHHHHHHHHHHHH
T ss_pred cc-CCCCEEEeecccCCcchhhhhhHhhHHHHH
Confidence 97 999999999999987666666776666554
No 46
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=100.00 E-value=7.8e-34 Score=297.73 Aligned_cols=268 Identities=18% Similarity=0.202 Sum_probs=195.3
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCC--------CCccCCccchhcc---------------------Ccc-
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN--------YFAFTPLLPSVTC---------------------GTV- 107 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~--------~~~~~~~~~~~~~---------------------g~~- 107 (515)
.+||+||||||||++||..+++.|.+|+|||+.. .+|++++..++.+ |..
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~Gi~~ 121 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGWKF 121 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGTEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcCccc
Confidence 4799999999999999999999999999999643 3666543222211 100
Q ss_pred -----cccccc-----------cchHHHHhhcCceEEEEEeEEEEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEcc
Q 010217 108 -----EARSIV-----------EPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAM 171 (515)
Q Consensus 108 -----~~~~~~-----------~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAt 171 (515)
+...+. ..+...+++.+++ ++.++...+++..-.|..... .++...+.+|++||||
T Consensus 122 ~~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~--~i~G~a~f~~~~~v~V~~~~~------~~~~~~i~a~~iiIAT 193 (542)
T 4b1b_A 122 DNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVK--YINGLAKLKDKNTVSYYLKGD------LSKEETVTGKYILIAT 193 (542)
T ss_dssp EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EECEEEEEEETTEEEEEEC--------CCCEEEEEEEEEEECC
T ss_pred CcccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEeeeEEEcCCCcceEeeccc------CCceEEEeeeeEEecc
Confidence 000111 1123345667766 678888888865333333221 2234589999999999
Q ss_pred CCCcCCCCCCCCC-CccccccChhHHHHHHHHHHHHHHhcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHH
Q 010217 172 GARANTFNTPGVE-ENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDL 250 (515)
Q Consensus 172 G~~~~~~~ipG~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~ 250 (515)
|++|..|+.++.. +.++ +.+ +...++.+| ++++|||||++|+|+|..++++
T Consensus 194 Gs~P~~P~~~~~~~~~~~---ts~-------------~~l~l~~lP-------~~lvIIGgG~IGlE~A~~~~~l----- 245 (542)
T 4b1b_A 194 GCRPHIPDDVEGAKELSI---TSD-------------DIFSLKKDP-------GKTLVVGASYVALECSGFLNSL----- 245 (542)
T ss_dssp CEEECCCSSSBTHHHHCB---CHH-------------HHTTCSSCC-------CSEEEECCSHHHHHHHHHHHHH-----
T ss_pred CCCCCCCCcccCCCcccc---Cch-------------hhhccccCC-------ceEEEECCCHHHHHHHHHHHhc-----
Confidence 9999988654432 2221 111 122344443 4999999999999999999998
Q ss_pred HhhCcccCCCcEEEEEeccccccccccHHHHHHHHHHhhcCCeEEEcCcEEEEEeC--CeEEEEecCCCceEEEecCeEE
Q 010217 251 FKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVV 328 (515)
Q Consensus 251 ~~~~p~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~--~~v~~~~~~~G~~~~i~~D~vi 328 (515)
|.+||++++ +++|+.+|+++++.+++.|++.||++++++.+.+++. +.+.+.. .+++. +.+|.|+
T Consensus 246 ---------G~~VTii~~-~~~L~~~D~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~~~~~v~~-~~~~~--~~~D~vL 312 (542)
T 4b1b_A 246 ---------GYDVTVAVR-SIVLRGFDQQCAVKVKLYMEEQGVMFKNGILPKKLTKMDDKILVEF-SDKTS--ELYDTVL 312 (542)
T ss_dssp ---------TCCEEEEES-SCSSTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEEETTEEEEEE-TTSCE--EEESEEE
T ss_pred ---------CCeEEEecc-cccccccchhHHHHHHHHHHhhcceeecceEEEEEEecCCeEEEEE-cCCCe--EEEEEEE
Confidence 689999987 5788999999999999999999999999999999874 3455443 45554 7899999
Q ss_pred EccCCCCccchHHH-HHHhCC--CCCC-ceeeCCCccccCCCCEEEecccccc
Q 010217 329 WSTGIAPHAIIKDF-MKQVGQ--TNRR-ALATDEWLRVEGSDSIYALGDCATV 377 (515)
Q Consensus 329 ~a~G~~~~p~~~~l-~~~~~~--~~~g-~i~vd~~l~t~~~~~IyA~GD~~~~ 377 (515)
+|+| +.||++.| ++.+++ +.++ .|.||+++|| +.|+|||+|||+..
T Consensus 313 vAvG--R~Pnt~~L~le~~gv~~~~~~~~i~vd~~~~T-s~p~IyAiGDv~~~ 362 (542)
T 4b1b_A 313 YAIG--RKGDIDGLNLESLNMNVNKSNNKIIADHLSCT-NIPSIFAVGDVAEN 362 (542)
T ss_dssp ECSC--EEESCGGGCGGGTTCCEETTTTEECCCTTSBC-SSTTEEECTTSBTT
T ss_pred Eccc--ccCCccccCcccceeeecccCceEeccccccc-cCCCeEEeccccCC
Confidence 9999 79999777 677776 4444 4688999998 99999999999965
No 47
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=100.00 E-value=5.6e-34 Score=296.36 Aligned_cols=266 Identities=17% Similarity=0.285 Sum_probs=196.1
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCcc----chh----------------ccCc-----cccccc
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLL----PSV----------------TCGT-----VEARSI 112 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~----~~~----------------~~g~-----~~~~~~ 112 (515)
.+||+|||||+||++||..|++.|++|+|||+++ +++++.. |.. ..+. .+...+
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 84 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELDLKKL 84 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEECCCEECHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCCCCCCcCHHHH
Confidence 4799999999999999999999999999999987 5543211 110 0011 011111
Q ss_pred cc-----------chHHHHhhcCceEEEEEeEEEEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCC-C
Q 010217 113 VE-----------PVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFN-T 180 (515)
Q Consensus 113 ~~-----------~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~-i 180 (515)
.. .+..++++.++++ +.+++..++. +.|.+. +. ++.||+||||||++|+.|+ +
T Consensus 85 ~~~~~~~~~~l~~~~~~~~~~~gv~~--~~g~~~~~~~--~~v~v~-g~----------~~~~d~lViATGs~p~~p~gi 149 (464)
T 2eq6_A 85 GGWRDQVVKKLTGGVGTLLKGNGVEL--LRGFARLVGP--KEVEVG-GE----------RYGAKSLILATGSEPLELKGF 149 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEE--EESCEEEEET--TEEEET-TE----------EEEEEEEEECCCEEECCBTTB
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEE--EeeeEEEccC--CEEEEc-cE----------EEEeCEEEEcCCCCCCCCCCC
Confidence 11 1234556678774 4566666764 466664 21 7999999999999998775 7
Q ss_pred CCCCCccccccChhHHHHHHHHHHHHHHhcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCC
Q 010217 181 PGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDS 260 (515)
Q Consensus 181 pG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~ 260 (515)
|| +..+ .+.+++.++.. ..+++++|||||++|+|+|..|.++ +
T Consensus 150 ~~-~~~v---~~~~~~~~l~~-------------------~~~~~vvViGgG~~g~e~A~~l~~~--------------g 192 (464)
T 2eq6_A 150 PF-GEDV---WDSTRALKVEE-------------------GLPKRLLVIGGGAVGLELGQVYRRL--------------G 192 (464)
T ss_dssp CC-SSSE---ECHHHHTCGGG-------------------CCCSEEEEECCSHHHHHHHHHHHHT--------------T
T ss_pred CC-CCcE---EcHHHHHhhhh-------------------hcCCEEEEECCCHHHHHHHHHHHHC--------------C
Confidence 76 2222 23333322110 0346999999999999999999886 6
Q ss_pred cEEEEEeccccccccccHHHHHHHHHHhhcCCeEEEcCcEEEEEeC--CeEEEEecCC--CceEEEecCeEEEccCCCCc
Q 010217 261 VKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGN--GETSSMPYGMVVWSTGIAPH 336 (515)
Q Consensus 261 ~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~--~~v~~~~~~~--G~~~~i~~D~vi~a~G~~~~ 336 (515)
.+|+++++.+++++.+++++.+.+.+.+++.||++++++.|++++. +.+.+....+ |+..++++|.||+|+| ..
T Consensus 193 ~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G--~~ 270 (464)
T 2eq6_A 193 AEVTLIEYMPEILPQGDPETAALLRRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVG--RK 270 (464)
T ss_dssp CEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTCCSCEEEEESEEEECSC--EE
T ss_pred CeEEEEEcCCccccccCHHHHHHHHHHHHhcCCEEEcCCEEEEEEEeCCEEEEEEeecCCCceeEEEcCEEEECCC--cc
Confidence 8999999999999999999999999999999999999999999974 3344432114 6644599999999999 57
Q ss_pred cchHHH-HHHhCC--CCCCceeeCCCccccCCCCEEEeccccccCc
Q 010217 337 AIIKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCATVNQ 379 (515)
Q Consensus 337 p~~~~l-~~~~~~--~~~g~i~vd~~l~t~~~~~IyA~GD~~~~~~ 379 (515)
|++..+ ++.+++ +.+|+|.||+++|| +.|+|||+|||+..+.
T Consensus 271 p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~~~ 315 (464)
T 2eq6_A 271 PRTEGLGLEKAGVKVDERGFIRVNARMET-SVPGVYAIGDAARPPL 315 (464)
T ss_dssp ESCTTSSHHHHTCCBCTTSCBCCCTTCBC-SSTTEEECGGGTCSSC
T ss_pred cCCCCCChhhcCceecCCCCEEECCCccc-CCCCEEEEeccCCCcc
Confidence 877443 677777 56789999999998 9999999999998643
No 48
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=100.00 E-value=1.2e-33 Score=278.66 Aligned_cols=277 Identities=14% Similarity=0.116 Sum_probs=197.8
Q ss_pred CeEEEECCcHHHHHHHHhccCCCC-eEEEEcCCCCCccCCccc----hhc--cCcccccccccchHHHHhhcCceEEEEE
Q 010217 59 KKVVVLGTGWAGTSFLKNLNNPSY-DVQVISPRNYFAFTPLLP----SVT--CGTVEARSIVEPVRNIVRKKNVDICFWE 131 (515)
Q Consensus 59 ~~VvIIGgG~AGlsaA~~L~~~g~-~V~vie~~~~~~~~~~~~----~~~--~g~~~~~~~~~~~~~~~~~~~i~v~~~~ 131 (515)
++|+|||||+||+++|..|++.|+ +|+|||++ .+++..... .++ ........+...+.+.+.+.++++. .
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~--~ 78 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG-MPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHE--M 78 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS-STTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHHTTSCEEE--C
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC-CCCcccccccccccCCCCcccCCHHHHHHHHHHHHHHcCCEEE--E
Confidence 689999999999999999999999 99999986 333322111 111 1112233455566777778887753 4
Q ss_pred eEEEEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCCCCCCCC----ccccccChhHHHHHHHHHHHHH
Q 010217 132 AECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEE----NCNFLKEVEDAQRIRRNVIESF 207 (515)
Q Consensus 132 ~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ipG~~~----~~~~~~~~~~a~~~~~~~~~~~ 207 (515)
++|..++.+++.+.+.... + ..+.||+||+|||+.|+.|++||.++ .++.+...+ .
T Consensus 79 ~~v~~i~~~~~~~~v~~~~-----g---~~~~~~~vv~AtG~~~~~~~~~g~~~~~~~~~~~~~~~~-------~----- 138 (311)
T 2q0l_A 79 TAVQRVSKKDSHFVILAED-----G---KTFEAKSVIIATGGSPKRTGIKGESEYWGKGVSTCATCD-------G----- 138 (311)
T ss_dssp SCEEEEEEETTEEEEEETT-----S---CEEEEEEEEECCCEEECCCCCBTHHHHBTTTEESCHHHH-------G-----
T ss_pred EEEEEEEEcCCEEEEEEcC-----C---CEEECCEEEECCCCCCCCCCCCChhhccCCcEEEeecCC-------h-----
Confidence 7899998877744443211 1 17999999999999999999998642 122211100 0
Q ss_pred HhcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccccccccHHHHHHHHHH
Q 010217 208 EKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEK 287 (515)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~ 287 (515)
....+++|+|||+|++|+|+|..|.++ +.+|+++++.+.+. .++.+ .+.
T Consensus 139 -----------~~~~~~~v~VvG~G~~g~e~A~~l~~~--------------g~~Vtlv~~~~~~~--~~~~~----~~~ 187 (311)
T 2q0l_A 139 -----------FFYKNKEVAVLGGGDTAVEEAIYLANI--------------CKKVYLIHRRDGFR--CAPIT----LEH 187 (311)
T ss_dssp -----------GGGTTSEEEEECCSHHHHHHHHHHHTT--------------SSEEEEECSSSSCC--SCHHH----HHH
T ss_pred -----------hhcCCCEEEEECCCHHHHHHHHHHHhc--------------CCEEEEEeeCCccC--CCHHH----HHH
Confidence 012457999999999999999999875 68999999988763 33332 333
Q ss_pred h-hcCCeEEEcCcEEEEEeCC--e---EEEEecCCCceEEEecCeEEEccCCCCccchHHHHHHhC----C--CCCCcee
Q 010217 288 F-SRDGIDVKLGSMVVKVTDK--E---IFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVG----Q--TNRRALA 355 (515)
Q Consensus 288 l-~~~gV~v~~~~~v~~i~~~--~---v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~~----~--~~~g~i~ 355 (515)
+ ++.||++++++.++++..+ + +.+....+|+..+++||.||+|+| ..|++ .+++.++ + +.+|+|.
T Consensus 188 l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G--~~p~~-~~l~~~g~~~~l~~~~~g~i~ 264 (311)
T 2q0l_A 188 AKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFVG--YDVNN-AVLKQEDNSMLCKCDEYGSIV 264 (311)
T ss_dssp HHTCTTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSC--EEECC-GGGBCTTSCBSSCBCTTSCBC
T ss_pred HhhCCCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEEEec--CccCh-hhhhcccccceeEeccCCCEE
Confidence 4 3579999999999999753 3 344433367755799999999999 57777 5656553 4 5679999
Q ss_pred eCCCccccCCCCEEEeccccccCccchHHHHHHHHHhh
Q 010217 356 TDEWLRVEGSDSIYALGDCATVNQRRVMEDIAAIFSKA 393 (515)
Q Consensus 356 vd~~l~t~~~~~IyA~GD~~~~~~~~~~~~~~~~~~~a 393 (515)
||+++|| +.|+|||+|||+..+......++.++..++
T Consensus 265 vd~~~~t-~~~~vya~GD~~~~~~~~~~~A~~~g~~aa 301 (311)
T 2q0l_A 265 VDFSMKT-NVQGLFAAGDIRIFAPKQVVCAASDGATAA 301 (311)
T ss_dssp CCTTCBC-SSTTEEECSTTBTTCCCCHHHHHHHHHHHH
T ss_pred eCCcccc-CCCCeEEcccccCcchHHHHHHHHhHHHHH
Confidence 9999998 999999999999975555666666655444
No 49
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.8e-34 Score=299.88 Aligned_cols=267 Identities=20% Similarity=0.293 Sum_probs=197.7
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCcc----chh-----------c-----cCc----------
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLL----PSV-----------T-----CGT---------- 106 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~----~~~-----------~-----~g~---------- 106 (515)
..+||+|||||+||++||..|++.|++|+|||++ .+++++.. |.. . .+.
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 88 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAK-ALGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLDKEH 88 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSCCSGGG
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCC-CcCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCccccccccccc
Confidence 3579999999999999999999999999999997 45543221 100 0 000
Q ss_pred --ccccccc-----------cchHHHHhhcCceEEEEEeEEEEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCC
Q 010217 107 --VEARSIV-----------EPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGA 173 (515)
Q Consensus 107 --~~~~~~~-----------~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~ 173 (515)
.+...+. ..+...+.+.+++ ++.+++..++.....+...+ ++...+.||+||||||+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~--~~~g~~~~i~~~~~~v~~~~--------g~~~~~~~d~lviAtGs 158 (479)
T 2hqm_A 89 LTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVD--VVFGWARFNKDGNVEVQKRD--------NTTEVYSANHILVATGG 158 (479)
T ss_dssp CCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEE--EEEEEEEECTTSCEEEEESS--------SCCEEEEEEEEEECCCE
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEeEEEEeeCCEEEEEeCC--------CcEEEEEeCEEEEcCCC
Confidence 0000011 1123345567765 55667887776543343322 22347899999999999
Q ss_pred CcCCC-CCCCCCCccccccChhHHHHHHHHHHHHHHhcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHh
Q 010217 174 RANTF-NTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFK 252 (515)
Q Consensus 174 ~~~~~-~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~ 252 (515)
.|..| ++||.+ .++ +.++...+ . ..+++++|||+|++|+|+|..|.++
T Consensus 159 ~p~~p~~i~g~~-~~~---~~~~~~~l-------------~-------~~~~~vvViGgG~ig~E~A~~l~~~------- 207 (479)
T 2hqm_A 159 KAIFPENIPGFE-LGT---DSDGFFRL-------------E-------EQPKKVVVVGAGYIGIELAGVFHGL------- 207 (479)
T ss_dssp EECCCTTSTTGG-GSB---CHHHHHHC-------------S-------SCCSEEEEECSSHHHHHHHHHHHHT-------
T ss_pred CCCCCCCCCCcc-ccc---chHHHhcc-------------c-------ccCCeEEEECCCHHHHHHHHHHHHc-------
Confidence 99998 899873 221 22222111 1 1356999999999999999999986
Q ss_pred hCcccCCCcEEEEEeccccccccccHHHHHHHHHHhhcCCeEEEcCcEEEEEeCC--e--EEEEecCCCceEEEecCeEE
Q 010217 253 LYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTDK--E--IFTKVRGNGETSSMPYGMVV 328 (515)
Q Consensus 253 ~~p~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~--~--v~~~~~~~G~~~~i~~D~vi 328 (515)
+.+|+++++.+++++.+++++.+.+.+.+++.||+++++++|++++.+ + +.+. +.+|+ .++++|.||
T Consensus 208 -------g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~-~~~G~-~~i~~D~vv 278 (479)
T 2hqm_A 208 -------GSETHLVIRGETVLRKFDECIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIH-MNDSK-SIDDVDELI 278 (479)
T ss_dssp -------TCEEEEECSSSSSCTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEE-ETTSC-EEEEESEEE
T ss_pred -------CCceEEEEeCCccccccCHHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEE-ECCCc-EEEEcCEEE
Confidence 689999999999999999999999999999999999999999999753 3 3443 45673 259999999
Q ss_pred EccCCCCccchHHH-HHHhCC--CCCCceeeCCCccccCCCCEEEeccccccC
Q 010217 329 WSTGIAPHAIIKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCATVN 378 (515)
Q Consensus 329 ~a~G~~~~p~~~~l-~~~~~~--~~~g~i~vd~~l~t~~~~~IyA~GD~~~~~ 378 (515)
+|+| ..|++ .| ++.+++ +.+|+|.||+++|| +.|+|||+|||+..+
T Consensus 279 ~a~G--~~p~~-~l~l~~~gl~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~~ 327 (479)
T 2hqm_A 279 WTIG--RKSHL-GMGSENVGIKLNSHDQIIADEYQNT-NVPNIYSLGDVVGKV 327 (479)
T ss_dssp ECSC--EEECC-CSSGGGGTCCBCTTSCBCCCTTCBC-SSTTEEECGGGTTSS
T ss_pred ECCC--CCCcc-ccChhhcCceECCCCCEeECCCCcc-CCCCEEEEEecCCCc
Confidence 9999 57887 66 677777 56799999999998 999999999998754
No 50
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=100.00 E-value=1.3e-33 Score=294.05 Aligned_cols=278 Identities=19% Similarity=0.225 Sum_probs=199.8
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchh------------------cc---Cc------ccc
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSV------------------TC---GT------VEA 109 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~------------------~~---g~------~~~ 109 (515)
.++||+|||||+||++||.+|++.|++|+|||++ .+|+++....+ .+ |. .+.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 81 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG-TIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPTIDR 81 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-STTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCCCCCCCH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC-CCCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCCCCccCH
Confidence 3589999999999999999999999999999988 45443211000 00 11 000
Q ss_pred ccccc------------chHHHHhhc-CceEEEEEeEEEEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcC
Q 010217 110 RSIVE------------PVRNIVRKK-NVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARAN 176 (515)
Q Consensus 110 ~~~~~------------~~~~~~~~~-~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~ 176 (515)
..+.. .+..++.+. +++ ++.+++..++.....|.+.+ ++...+.||+||||||++|+
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~--~~~g~~~~~~~~~~~v~~~~--------g~~~~~~~d~lviAtGs~p~ 151 (467)
T 1zk7_A 82 SKLLAQQQARVDELRHAKYEGILGGNPAIT--VVHGEARFKDDQSLTVRLNE--------GGERVVMFDRCLVATGASPA 151 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHTTCTTEE--EEEEEEEEEETTEEEEEETT--------SSEEEEECSEEEECCCEEEC
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHhccCCeE--EEEEEEEEccCCEEEEEeCC--------CceEEEEeCEEEEeCCCCCC
Confidence 11111 122445555 755 55677888886543443322 21247999999999999999
Q ss_pred CCCCCCCCCccccccChhHHHHHHHHHHHHHHhcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcc
Q 010217 177 TFNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPK 256 (515)
Q Consensus 177 ~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~ 256 (515)
.|++||.+... +.+..++..+ . ..+++++|||+|++|+|+|..+.++
T Consensus 152 ~p~i~G~~~~~--~~~~~~~~~~-------------~-------~~~~~vvViGgG~~g~E~A~~l~~~----------- 198 (467)
T 1zk7_A 152 VPPIPGLKESP--YWTSTEALAS-------------D-------TIPERLAVIGSSVVALELAQAFARL----------- 198 (467)
T ss_dssp CCCCTTTTTSC--CBCHHHHHHC-------------S-------SCCSEEEEECCSHHHHHHHHHHHHT-----------
T ss_pred CCCCCCCCcCc--eecHHHHhcc-------------c-------ccCCEEEEECCCHHHHHHHHHHHHc-----------
Confidence 99999975421 1233332211 1 1356999999999999999999986
Q ss_pred cCCCcEEEEEeccccccccccHHHHHHHHHHhhcCCeEEEcCcEEEEEeCC--eEEEEecCCCceEEEecCeEEEccCCC
Q 010217 257 VKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTDK--EIFTKVRGNGETSSMPYGMVVWSTGIA 334 (515)
Q Consensus 257 ~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~--~v~~~~~~~G~~~~i~~D~vi~a~G~~ 334 (515)
+.+|+++++.+++++ +++++.+.+.+.+++.||++++++.|++++.+ .+.+. +. +. ++++|.||+|+|
T Consensus 199 ---g~~Vtlv~~~~~~l~-~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~-~~-~~--~i~aD~Vv~a~G-- 268 (467)
T 1zk7_A 199 ---GSKVTVLARNTLFFR-EDPAIGEAVTAAFRAEGIEVLEHTQASQVAHMDGEFVLT-TT-HG--ELRADKLLVATG-- 268 (467)
T ss_dssp ---TCEEEEECSSCTTTT-SCHHHHHHHHHHHHHTTCEEETTCCEEEEEEETTEEEEE-ET-TE--EEEESEEEECSC--
T ss_pred ---CCEEEEEEECCccCC-CCHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEE-EC-Cc--EEEcCEEEECCC--
Confidence 689999999999999 99999999999999999999999999999742 23333 23 43 499999999999
Q ss_pred CccchHHH-HHHhCC--CCCCceeeCCCccccCCCCEEEeccccccCccchHHHHHHHH
Q 010217 335 PHAIIKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCATVNQRRVMEDIAAIF 390 (515)
Q Consensus 335 ~~p~~~~l-~~~~~~--~~~g~i~vd~~l~t~~~~~IyA~GD~~~~~~~~~~~~~~~~~ 390 (515)
..|++..+ ++.+++ +.+|+|.||+++|| +.|+|||+|||+..+.. ...+..++.
T Consensus 269 ~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t-~~~~iya~GD~~~~~~~-~~~A~~~g~ 325 (467)
T 1zk7_A 269 RTPNTRSLALDAAGVTVNAQGAIVIDQGMRT-SNPNIYAAGDCTDQPQF-VYVAAAAGT 325 (467)
T ss_dssp EEESCTTSCGGGGTCCBCTTSCBCCCTTCBC-SSTTEEECSTTBSSCCC-HHHHHHHHH
T ss_pred CCcCCCcCCchhcCCcCCCCCCEEECCCccc-CCCCEEEEeccCCCccc-HHHHHHHHH
Confidence 57777433 566776 56788999999998 99999999999987542 333344433
No 51
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.6e-34 Score=301.35 Aligned_cols=273 Identities=18% Similarity=0.278 Sum_probs=199.9
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhcc---------------------Cc------ccc
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTC---------------------GT------VEA 109 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~---------------------g~------~~~ 109 (515)
.++||+|||||+||+++|..|++.|++|+|||+++.+++......+.+ +. .+.
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 84 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEIDL 84 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCEEECH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCCccCH
Confidence 468999999999999999999999999999999987776532111100 10 000
Q ss_pred cc-----------cccchHHHHhhcCceEEEEEeEEEEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCC
Q 010217 110 RS-----------IVEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (515)
Q Consensus 110 ~~-----------~~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~ 178 (515)
.. +...+...+.+.++++ ..+++..++.+ .+.+... +++...+.||+||+|||++|..|
T Consensus 85 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~--~~g~~~~~~~~--~~~v~~~------~G~~~~i~~d~lIiAtGs~p~~p 154 (470)
T 1dxl_A 85 AAMMGQKDKAVSNLTRGIEGLFKKNKVTY--VKGYGKFVSPS--EISVDTI------EGENTVVKGKHIIIATGSDVKSL 154 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCEE--EESCEEEEETT--EEEECCS------SSCCEEEECSEEEECCCEEECCB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEeEEEEecCC--EEEEEeC------CCceEEEEcCEEEECCCCCCCCC
Confidence 01 1111234556677775 44555556654 4555421 12124799999999999999999
Q ss_pred CCCCCCC-ccccccChhHHHHHHHHHHHHHHhcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCccc
Q 010217 179 NTPGVEE-NCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKV 257 (515)
Q Consensus 179 ~ipG~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~ 257 (515)
+++|.+. .+ .+..++.. +. ..+++++|||+|++|+|+|..|.++
T Consensus 155 ~~~g~~~~~v---~~~~~~~~-------------~~-------~~~~~vvViGgG~~g~e~A~~l~~~------------ 199 (470)
T 1dxl_A 155 PGVTIDEKKI---VSSTGALA-------------LS-------EIPKKLVVIGAGYIGLEMGSVWGRI------------ 199 (470)
T ss_dssp TTBCCCSSSE---ECHHHHTT-------------CS-------SCCSEEEESCCSHHHHHHHHHHHHH------------
T ss_pred CCCCCCcccE---EeHHHhhh-------------hh-------hcCCeEEEECCCHHHHHHHHHHHHc------------
Confidence 9998753 22 22222211 11 1346999999999999999999886
Q ss_pred CCCcEEEEEeccccccccccHHHHHHHHHHhhcCCeEEEcCcEEEEEeCCe--EEEEe--cCCCceEEEecCeEEEccCC
Q 010217 258 KDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTDKE--IFTKV--RGNGETSSMPYGMVVWSTGI 333 (515)
Q Consensus 258 ~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~--v~~~~--~~~G~~~~i~~D~vi~a~G~ 333 (515)
+.+|+++++.+++++.+++++.+.+.+.+++.||++++++.|.+++.++ +.+.. ..+|+..++++|.||+|+|
T Consensus 200 --g~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G- 276 (470)
T 1dxl_A 200 --GSEVTVVEFASEIVPTMDAEIRKQFQRSLEKQGMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAG- 276 (470)
T ss_dssp --TCEEEEECSSSSSSTTSCHHHHHHHHHHHHHSSCCEECSEEEEEEECSSSSEEEEEEESSSCCCEEEEESEEECCCC-
T ss_pred --CCcEEEEEcCCcccccccHHHHHHHHHHHHHcCCEEEeCCEEEEEEEcCCeEEEEEEecCCCcceEEECCEEEECCC-
Confidence 6899999999999999999999999999999999999999999998542 44332 1145433699999999999
Q ss_pred CCccchHHH-HHHhCC--CCCCceeeCCCccccCCCCEEEeccccccCc
Q 010217 334 APHAIIKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCATVNQ 379 (515)
Q Consensus 334 ~~~p~~~~l-~~~~~~--~~~g~i~vd~~l~t~~~~~IyA~GD~~~~~~ 379 (515)
..|++..+ ++.+++ +.+|+|.||+++|| +.|+|||+|||+..+.
T Consensus 277 -~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~~~ 323 (470)
T 1dxl_A 277 -RTPFTSGLNLDKIGVETDKLGRILVNERFST-NVSGVYAIGDVIPGPM 323 (470)
T ss_dssp -EEECCTTSCCTTTTCCBCSSSCBCCCTTCBC-SSTTEEECSTTSSSCC
T ss_pred -CCcCCCCCCchhcCCccCCCCCEeECcCCcc-CCCCEEEEeccCCCCc
Confidence 57877332 567776 55789999999998 9999999999998643
No 52
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=100.00 E-value=1.3e-33 Score=293.48 Aligned_cols=262 Identities=19% Similarity=0.295 Sum_probs=197.1
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhc--------------------cCc------ccccc
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVT--------------------CGT------VEARS 111 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~--------------------~g~------~~~~~ 111 (515)
.+||+|||||+||++||..|++.|++|+|||++ .+++++....+. .+. .+...
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~ 82 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK-ALGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQASGGTLDWPR 82 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC---CCHHH
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC-CCCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccCCCCcCHHH
Confidence 579999999999999999999999999999997 455542211000 011 00001
Q ss_pred c-----------ccchHHHHhhcCceEEEEEeEEEEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCCC
Q 010217 112 I-----------VEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNT 180 (515)
Q Consensus 112 ~-----------~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~i 180 (515)
+ ...+...+.+.+++ ++.+++..++. +.|.+ ++ ..+.||+||||||++|..|++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~gv~--~~~g~~~~i~~--~~v~~-~g----------~~~~~d~lviAtGs~p~~p~i 147 (463)
T 2r9z_A 83 LVAGRDRYIGAINSFWDGYVERLGIT--RVDGHARFVDA--HTIEV-EG----------QRLSADHIVIATGGRPIVPRL 147 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCE--EEESCEEEEET--TEEEE-TT----------EEEEEEEEEECCCEEECCCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCE--EEEeEEEEccC--CEEEE-CC----------EEEEcCEEEECCCCCCCCCCC
Confidence 1 11123344667766 45667777764 46766 22 179999999999999999999
Q ss_pred CCCCCccccccChhHHHHHHHHHHHHHHhcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCC
Q 010217 181 PGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDS 260 (515)
Q Consensus 181 pG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~ 260 (515)
||.+ .+ .+.++...+ . ..+++++|||+|++|+|+|..|.++ +
T Consensus 148 ~G~~-~~---~~~~~~~~~-------------~-------~~~~~vvVvGgG~~g~e~A~~l~~~--------------G 189 (463)
T 2r9z_A 148 PGAE-LG---ITSDGFFAL-------------Q-------QQPKRVAIIGAGYIGIELAGLLRSF--------------G 189 (463)
T ss_dssp TTGG-GS---BCHHHHHHC-------------S-------SCCSEEEEECCSHHHHHHHHHHHHT--------------T
T ss_pred CCcc-ce---ecHHHHhhh-------------h-------ccCCEEEEECCCHHHHHHHHHHHhc--------------C
Confidence 9973 22 222222211 1 1346999999999999999999886 6
Q ss_pred cEEEEEeccccccccccHHHHHHHHHHhhcCCeEEEcCcEEEEEeC--CeEEEEecCCCceEEEecCeEEEccCCCCccc
Q 010217 261 VKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGIAPHAI 338 (515)
Q Consensus 261 ~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~--~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~ 338 (515)
.+|+++++.+++++.+++++.+.+.+.+++.||+++++++|++++. +++.+. +.+|+. ++++|.||+|+| ..|+
T Consensus 190 ~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~-~~~G~~-~i~~D~vv~a~G--~~p~ 265 (463)
T 2r9z_A 190 SEVTVVALEDRLLFQFDPLLSATLAENMHAQGIETHLEFAVAALERDAQGTTLV-AQDGTR-LEGFDSVIWAVG--RAPN 265 (463)
T ss_dssp CEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEESSCCEEEEEEETTEEEEE-ETTCCE-EEEESEEEECSC--EEES
T ss_pred CEEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEE-EeCCcE-EEEcCEEEECCC--CCcC
Confidence 8999999999999999999999999999999999999999999974 344444 357763 499999999999 5788
Q ss_pred hHHH-HHHhCC--CCCCceeeCCCccccCCCCEEEeccccccC
Q 010217 339 IKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCATVN 378 (515)
Q Consensus 339 ~~~l-~~~~~~--~~~g~i~vd~~l~t~~~~~IyA~GD~~~~~ 378 (515)
+..| ++.+++ +.+|+|.||+++|| +.|+|||+|||+..+
T Consensus 266 ~~~l~~~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~~ 307 (463)
T 2r9z_A 266 TRDLGLEAAGIEVQSNGMVPTDAYQNT-NVPGVYALGDITGRD 307 (463)
T ss_dssp CTTSCHHHHTCCCCTTSCCCCCTTSBC-SSTTEEECGGGGTSC
T ss_pred CCCCCchhcCCccCCCCCEeECCCCcc-CCCCEEEEeecCCCc
Confidence 7445 677777 56899999999998 999999999999754
No 53
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=4.4e-34 Score=299.80 Aligned_cols=270 Identities=18% Similarity=0.315 Sum_probs=187.3
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCcc----chh----------------ccCc-----cccc--
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLL----PSV----------------TCGT-----VEAR-- 110 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~----~~~----------------~~g~-----~~~~-- 110 (515)
.+||+|||||+||++||..|++.|++|+|||+++ +++++.. |.. ..+. .+..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~ 80 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR-LGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTKFSFNLPLL 80 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS-TTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCHHHH
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC-cCccccccCCcchHHHHHHHHHHHHHHhhHhcCCccCCccCHHHH
Confidence 4799999999999999999999999999999985 4443211 110 0010 0000
Q ss_pred ---------ccccchHHHHhhcCceEEEEEeEEEEEecCCCEEEEeeCCcc---CCCCCceEEeecCEEEEccCCCcCCC
Q 010217 111 ---------SIVEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNT---NLNGKEEFCMDYDYLVIAMGARANTF 178 (515)
Q Consensus 111 ---------~~~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~---~~~~~~~~~~~~d~lviAtG~~~~~~ 178 (515)
.+...+...+++.++++ +.+++..++. +.+.+.+.... ...++....+.||+||||||++|..|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~gv~~--~~g~~~~id~--~~v~v~~~~~~~~~~~~~~~~~~~~~d~lViAtGs~p~~p 156 (500)
T 1onf_A 81 VERRDKYIQRLNNIYRQNLSKDKVDL--YEGTASFLSE--NRILIKGTKDNNNKDNGPLNEEILEGRNILIAVGNKPVFP 156 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEE--EESCCCCC----------------------------CBSSEEECCCCCBCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEE--EEeEEEEeeC--CEEEEEeccccccccccCCCceEEEeCEEEECCCCCCCCC
Confidence 11112334456678764 4555655654 45555320000 00000112789999999999999999
Q ss_pred CCCCCCCccccccChhHHHHHHHHHHHHHHhcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccC
Q 010217 179 NTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVK 258 (515)
Q Consensus 179 ~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~ 258 (515)
++||.+ .++ +.+++. .+. .+++++|||+|++|+|+|..|.++
T Consensus 157 ~i~G~~-~~~---~~~~~~-------------~~~--------~~~~vvViGgG~ig~E~A~~l~~~------------- 198 (500)
T 1onf_A 157 PVKGIE-NTI---SSDEFF-------------NIK--------ESKKIGIVGSGYIAVELINVIKRL------------- 198 (500)
T ss_dssp SCTTGG-GCE---EHHHHT-------------TCC--------CCSEEEEECCSHHHHHHHHHHHTT-------------
T ss_pred CCCCCC-ccc---CHHHHh-------------ccC--------CCCeEEEECChHHHHHHHHHHHHc-------------
Confidence 999973 222 222211 111 146999999999999999999886
Q ss_pred CCcEEEEEeccccccccccHHHHHHHHHHhhcCCeEEEcCcEEEEEeCC--e-EEEEecCCCceEEEecCeEEEccCCCC
Q 010217 259 DSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTDK--E-IFTKVRGNGETSSMPYGMVVWSTGIAP 335 (515)
Q Consensus 259 ~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~--~-v~~~~~~~G~~~~i~~D~vi~a~G~~~ 335 (515)
+.+|+++++.+++++.+++++.+.+.+.|++.||++++++.|++++.+ + +.+. +.+|+. ++++|.||+|+| .
T Consensus 199 -g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~v~-~~~g~~-~~~~D~vi~a~G--~ 273 (500)
T 1onf_A 199 -GIDSYIFARGNRILRKFDESVINVLENDMKKNNINIVTFADVVEIKKVSDKNLSIH-LSDGRI-YEHFDHVIYCVG--R 273 (500)
T ss_dssp -TCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESSTTCEEEE-ETTSCE-EEEESEEEECCC--B
T ss_pred -CCeEEEEecCCccCcccchhhHHHHHHHHHhCCCEEEECCEEEEEEEcCCceEEEE-ECCCcE-EEECCEEEECCC--C
Confidence 689999999999999999999999999999999999999999999743 3 4444 356764 489999999999 5
Q ss_pred ccchHHH-HHHhCC-CCCCceeeCCCccccCCCCEEEeccccc
Q 010217 336 HAIIKDF-MKQVGQ-TNRRALATDEWLRVEGSDSIYALGDCAT 376 (515)
Q Consensus 336 ~p~~~~l-~~~~~~-~~~g~i~vd~~l~t~~~~~IyA~GD~~~ 376 (515)
.|++..| ++.+++ ..+|+|.||+++|| +.|+|||+|||+.
T Consensus 274 ~p~~~~l~~~~~g~~~~~G~i~vd~~~~t-~~~~iya~GD~~~ 315 (500)
T 1onf_A 274 SPDTENLKLEKLNVETNNNYIVVDENQRT-SVNNIYAVGDCCM 315 (500)
T ss_dssp CCTTTTSSCTTTTCCBSSSCEEECTTCBC-SSSSEEECSTTEE
T ss_pred CcCCCCCCchhcCccccCCEEEECCCccc-CCCCEEEEecccc
Confidence 7777445 567776 46788999999997 9999999999993
No 54
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=100.00 E-value=2.1e-33 Score=277.97 Aligned_cols=281 Identities=15% Similarity=0.178 Sum_probs=199.9
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccc----hhcc-CcccccccccchHHHHhhcCceEEEEE
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLP----SVTC-GTVEARSIVEPVRNIVRKKNVDICFWE 131 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~----~~~~-g~~~~~~~~~~~~~~~~~~~i~v~~~~ 131 (515)
+.+||+|||||+||+++|..|++.|++|+|||+. ..++..... .++. ......++...+.+.+.+.++++ ..
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~ 91 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKA-VAGGLTAEAPLVENYLGFKSIVGSELAKLFADHAANYAKIR--EG 91 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-STTGGGGGCSCBCCBTTBSSBCHHHHHHHHHHHHHTTSEEE--ET
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCC-CCCccccccchhhhcCCCcccCHHHHHHHHHHHHHHcCCEE--EE
Confidence 4579999999999999999999999999999985 344322111 1110 11122344455666777778664 44
Q ss_pred eEEEEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCCCCCCCCcc-ccccChhHHHHHHHHHHHHHHhc
Q 010217 132 AECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENC-NFLKEVEDAQRIRRNVIESFEKA 210 (515)
Q Consensus 132 ~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ipG~~~~~-~~~~~~~~a~~~~~~~~~~~~~~ 210 (515)
++|..++...+.+.+... +. ++.||+||+|||+.|+.|++||.++.. ..+...... .
T Consensus 92 ~~v~~i~~~~~~~~v~~~------~~---~~~~~~li~AtG~~~~~~~i~g~~~~~~~~~~~~~~~-------~------ 149 (319)
T 3cty_A 92 VEVRSIKKTQGGFDIETN------DD---TYHAKYVIITTGTTHKHLGVKGESEYFGKGTSYCSTC-------D------ 149 (319)
T ss_dssp CCEEEEEEETTEEEEEES------SS---EEEEEEEEECCCEEECCCCCBTTTTTBTTTEESCHHH-------H------
T ss_pred eeEEEEEEeCCEEEEEEC------CC---EEEeCEEEECCCCCcccCCCCChHHhCCceEEEEEec-------c------
Confidence 789999877775544331 21 789999999999999999999875311 001111000 0
Q ss_pred CCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccccccccHHHHHHHHHHhhc
Q 010217 211 SLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSR 290 (515)
Q Consensus 211 ~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~ 290 (515)
.....+++++|||+|++|+|+|..|.++ +.+|+++++.+.+.. ++. +.+.+++
T Consensus 150 -------~~~~~~~~v~viG~G~~g~e~a~~l~~~--------------g~~V~~i~~~~~~~~--~~~----l~~~l~~ 202 (319)
T 3cty_A 150 -------GYLFKGKRVVTIGGGNSGAIAAISMSEY--------------VKNVTIIEYMPKYMC--ENA----YVQEIKK 202 (319)
T ss_dssp -------GGGGBTSEEEEECCSHHHHHHHHHHTTT--------------BSEEEEECSSSSCCS--CHH----HHHHHHH
T ss_pred -------hhhcCCCeEEEECCCHHHHHHHHHHHhh--------------CCcEEEEEcCCccCC--CHH----HHHHHhc
Confidence 0012567999999999999999999875 579999999887642 233 3455668
Q ss_pred CCeEEEcCcEEEEEeCC-----eEEEEecCCCceEEEecCeEEEccCCCCccchHHHHHHhCC--CCCCceeeCCCcccc
Q 010217 291 DGIDVKLGSMVVKVTDK-----EIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ--TNRRALATDEWLRVE 363 (515)
Q Consensus 291 ~gV~v~~~~~v~~i~~~-----~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~~~--~~~g~i~vd~~l~t~ 363 (515)
.||+++++++++++..+ ++.+....+|+..++++|.||+|+| ..|++ .+++.+++ +.+|+|.||++++|
T Consensus 203 ~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G--~~p~~-~~l~~~gl~~~~~g~i~vd~~~~t- 278 (319)
T 3cty_A 203 RNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVG--LIPQT-SFLKDSGVKLDERGYIVVDSRQRT- 278 (319)
T ss_dssp TTCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECCC--EEECC-GGGTTSCCCBCTTSCBCCCTTCBC-
T ss_pred CCcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEeeC--CccCh-HHHhhccccccCCccEeCCCCCcc-
Confidence 89999999999999754 2444433467655799999999999 57777 56667666 66799999999997
Q ss_pred CCCCEEEeccccccCccchHHHHHHHHHhh
Q 010217 364 GSDSIYALGDCATVNQRRVMEDIAAIFSKA 393 (515)
Q Consensus 364 ~~~~IyA~GD~~~~~~~~~~~~~~~~~~~a 393 (515)
+.|+|||+|||+..+......++.++..++
T Consensus 279 ~~~~vya~GD~~~~~~~~~~~A~~~g~~aa 308 (319)
T 3cty_A 279 SVPGVYAAGDVTSGNFAQIASAVGDGCKAA 308 (319)
T ss_dssp SSTTEEECSTTBTTCCCCHHHHHHHHHHHH
T ss_pred CCCCEEEeecccCcchhhHHHHHHHHHHHH
Confidence 999999999999875555666666655444
No 55
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=100.00 E-value=6.3e-34 Score=297.39 Aligned_cols=268 Identities=20% Similarity=0.236 Sum_probs=198.6
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhc--------------------cCc------cccc
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVT--------------------CGT------VEAR 110 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~--------------------~g~------~~~~ 110 (515)
..+||+|||||+||++||..|++.|++|+|||++ .+++++....+. .+. .+..
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~-~~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 97 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAELGARAAVVESH-KLGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEGKFNWR 97 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCCCCCCCHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCCCCccCHH
Confidence 4689999999999999999999999999999976 455442211100 000 0000
Q ss_pred c-----------cccchHHHHhhcCceEEEEEeEEEEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCC-
Q 010217 111 S-----------IVEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF- 178 (515)
Q Consensus 111 ~-----------~~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~- 178 (515)
. +...+...+...+++ ++.+++..++.....+.. ++ .++.||+||||||+.|..|
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~gv~--~~~g~~~~~~~~~~~v~~-~g----------~~~~~d~lviAtG~~p~~p~ 164 (478)
T 3dk9_A 98 VIKEKRDAYVSRLNAIYQNNLTKSHIE--IIRGHAAFTSDPKPTIEV-SG----------KKYTAPHILIATGGMPSTPH 164 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCE--EEESCEEECSCSSCEEEE-TT----------EEEECSCEEECCCEEECCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcE--EEEeEEEEeeCCeEEEEE-CC----------EEEEeeEEEEccCCCCCCCC
Confidence 0 111233445566766 567778888877666652 21 2799999999999999998
Q ss_pred --CCCCCCCccccccChhHHHHHHHHHHHHHHhcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcc
Q 010217 179 --NTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPK 256 (515)
Q Consensus 179 --~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~ 256 (515)
++||.+ .+ .+.++. + .+.. .+++++|||+|++|+|+|..|.++
T Consensus 165 ~~~i~G~~-~~---~~~~~~----------~---~~~~-------~~~~vvViGgG~~g~E~A~~l~~~----------- 209 (478)
T 3dk9_A 165 ESQIPGAS-LG---ITSDGF----------F---QLEE-------LPGRSVIVGAGYIAVEMAGILSAL----------- 209 (478)
T ss_dssp TTTSTTGG-GS---BCHHHH----------T---TCCS-------CCSEEEEECCSHHHHHHHHHHHHT-----------
T ss_pred cCCCCCCc-ee---EchHHh----------h---chhh-------cCccEEEECCCHHHHHHHHHHHHc-----------
Confidence 899975 21 122111 1 1111 346999999999999999999986
Q ss_pred cCCCcEEEEEeccccccccccHHHHHHHHHHhhcCCeEEEcCcEEEEEeC--Ce--EEEEecC--CCce--EEEecCeEE
Q 010217 257 VKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KE--IFTKVRG--NGET--SSMPYGMVV 328 (515)
Q Consensus 257 ~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~--~~--v~~~~~~--~G~~--~~i~~D~vi 328 (515)
+.+|+++++.+++++.+++++.+.+.+.|++.||++++++.+++++. ++ +.+.... +|+. .++++|.||
T Consensus 210 ---g~~Vtlv~~~~~~l~~~d~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi 286 (478)
T 3dk9_A 210 ---GSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLL 286 (478)
T ss_dssp ---TCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEE
T ss_pred ---CCeEEEEEeCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEE
Confidence 68999999999999999999999999999999999999999999974 33 4433321 1322 469999999
Q ss_pred EccCCCCccchHHH-HHHhCC--CCCCceeeCCCccccCCCCEEEeccccccCc
Q 010217 329 WSTGIAPHAIIKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCATVNQ 379 (515)
Q Consensus 329 ~a~G~~~~p~~~~l-~~~~~~--~~~g~i~vd~~l~t~~~~~IyA~GD~~~~~~ 379 (515)
+|+| ..|++..| ++.+++ +.+|+|.||++++| +.|+|||+|||+..+.
T Consensus 287 ~a~G--~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~~~ 337 (478)
T 3dk9_A 287 WAIG--RVPNTKDLSLNKLGIQTDDKGHIIVDEFQNT-NVKGIYAVGDVCGKAL 337 (478)
T ss_dssp ECSC--EEESCTTSCGGGGTCCBCTTCCBCCCTTCBC-SSTTEEECGGGGCSSC
T ss_pred Eeec--cccCCCCCCchhcCCeeCCCCCEeeCCCccc-CCCCEEEEEecCCCCc
Confidence 9999 57887545 677777 67899999999998 9999999999996543
No 56
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=100.00 E-value=6.7e-34 Score=297.32 Aligned_cols=274 Identities=18% Similarity=0.265 Sum_probs=195.3
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhc--------------------cCc------ccccc
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVT--------------------CGT------VEARS 111 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~--------------------~g~------~~~~~ 111 (515)
.+||+|||||+||+++|..|++.|++|+|||+++.+++.+....+. .+. .+...
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~~~~~~~~~ 85 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYPEPELDIDM 85 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCCHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccCCCccCHHH
Confidence 5799999999999999999999999999999987776542111100 010 00011
Q ss_pred ccc-----------chHHHHhhcCceEEEEEeEEEEEecCCCEEEEe--eCCc--cCCCCCceEEeecCEEEEccCCCcC
Q 010217 112 IVE-----------PVRNIVRKKNVDICFWEAECFKIDAENKKVYCR--SSQN--TNLNGKEEFCMDYDYLVIAMGARAN 176 (515)
Q Consensus 112 ~~~-----------~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~--~~~~--~~~~~~~~~~~~~d~lviAtG~~~~ 176 (515)
+.. .+...+.+.++++ +.+++..++. +.+.+. ++.. ....+++..++.||+||+|||++|.
T Consensus 86 ~~~~~~~~~~~l~~~~~~~~~~~gv~~--~~g~~~~~~~--~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lViAtGs~p~ 161 (482)
T 1ojt_A 86 LRAYKDGVVSRLTGGLAGMAKSRKVDV--IQGDGQFLDP--HHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRVT 161 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEE--EEEEEEEEET--TEEEEEEEEEEETTEEEEEEEEEEEEEEEEEECCCEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcEE--EeeEEEEccC--CEEEEEecCCcccccccccCcceEEEcCEEEECCCCCCC
Confidence 111 1234556678775 4444555554 455543 2200 0000011247999999999999998
Q ss_pred CCC-CCCCCCccccccChhHHHHHHHHHHHHHHhcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCc
Q 010217 177 TFN-TPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYP 255 (515)
Q Consensus 177 ~~~-ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p 255 (515)
.|+ +| .+.. +.+.+++.. +. ..+++++|||||++|+|+|..|.++
T Consensus 162 ~~~~i~-~~~~---v~~~~~~~~-------------~~-------~~~~~vvViGgG~ig~E~A~~l~~~---------- 207 (482)
T 1ojt_A 162 KLPFIP-EDPR---IIDSSGALA-------------LK-------EVPGKLLIIGGGIIGLEMGTVYSTL---------- 207 (482)
T ss_dssp CCSSCC-CCTT---EECHHHHTT-------------CC-------CCCSEEEEESCSHHHHHHHHHHHHH----------
T ss_pred CCCCCC-ccCc---EEcHHHHhc-------------cc-------ccCCeEEEECCCHHHHHHHHHHHHc----------
Confidence 876 66 3322 233333221 11 1356999999999999999999986
Q ss_pred ccCCCcEEEEEeccccccccccHHHHHHHHHHhhcCCeEEEcCcEEEEEeCC--eEEEEecCC----CceEEEecCeEEE
Q 010217 256 KVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTDK--EIFTKVRGN----GETSSMPYGMVVW 329 (515)
Q Consensus 256 ~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~--~v~~~~~~~----G~~~~i~~D~vi~ 329 (515)
+.+|+++++.+++++.+++++.+.+.+.|++.||++++++.|.+++.+ .+.+.. .+ |++ +++|.||+
T Consensus 208 ----G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~-~~~~~~g~~--~~~D~vv~ 280 (482)
T 1ojt_A 208 ----GSRLDVVEMMDGLMQGADRDLVKVWQKQNEYRFDNIMVNTKTVAVEPKEDGVYVTF-EGANAPKEP--QRYDAVLV 280 (482)
T ss_dssp ----TCEEEEECSSSSSSTTSCHHHHHHHHHHHGGGEEEEECSCEEEEEEEETTEEEEEE-ESSSCCSSC--EEESCEEE
T ss_pred ----CCeEEEEEECCccccccCHHHHHHHHHHHHhcCCEEEECCEEEEEEEcCCeEEEEE-eccCCCceE--EEcCEEEE
Confidence 689999999999999999999999999999999999999999999743 333332 23 553 88999999
Q ss_pred ccCCCCccchHHH-HHHhCC--CCCCceeeCCCccccCCCCEEEeccccccCc
Q 010217 330 STGIAPHAIIKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCATVNQ 379 (515)
Q Consensus 330 a~G~~~~p~~~~l-~~~~~~--~~~g~i~vd~~l~t~~~~~IyA~GD~~~~~~ 379 (515)
|+| ..|++..+ ++.+++ +.+|+|.||+++|| +.|+|||+|||+..+.
T Consensus 281 a~G--~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~~~ 330 (482)
T 1ojt_A 281 AAG--RAPNGKLISAEKAGVAVTDRGFIEVDKQMRT-NVPHIYAIGDIVGQPM 330 (482)
T ss_dssp CCC--EEECGGGTTGGGTTCCCCTTSCCCCCTTSBC-SSTTEEECGGGTCSSC
T ss_pred CcC--CCcCCCCCChhhcCceeCCCCCEeeCCCccc-CCCCEEEEEcccCCCc
Confidence 999 57888444 677777 55689999999998 9999999999998643
No 57
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=1.3e-33 Score=276.04 Aligned_cols=274 Identities=14% Similarity=0.171 Sum_probs=197.4
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCC-ccchhcc-CcccccccccchHHHHhhc-CceEEEEEeEE
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTP-LLPSVTC-GTVEARSIVEPVRNIVRKK-NVDICFWEAEC 134 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~-~~~~~~~-g~~~~~~~~~~~~~~~~~~-~i~v~~~~~~v 134 (515)
++||+|||||+||+++|..|++.|++|+|||+++..+..+ ....+.. ......++...+.+.+.++ ++ .++.++|
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~v 79 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEARRQIERYPTI--HWVEGRV 79 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHHHHHHTTCTTE--EEEESCE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHHHHHHHhcCCe--EEEEeEE
Confidence 4799999999999999999999999999999876544322 1111111 1233345666677777776 44 4667899
Q ss_pred EEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCCCCCCCCcc-ccccChhHHHHHHHHHHHHHHhcCCC
Q 010217 135 FKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENC-NFLKEVEDAQRIRRNVIESFEKASLP 213 (515)
Q Consensus 135 ~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ipG~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~ 213 (515)
+.++++++.+.+.... + .++.||+||+|||+.|+.|++||..... ....... ....
T Consensus 80 ~~i~~~~~~~~v~~~~-----g---~~~~~d~vviAtG~~~~~~~~~g~~~~~~~~~~~~~----~~~~----------- 136 (297)
T 3fbs_A 80 TDAKGSFGEFIVEIDG-----G---RRETAGRLILAMGVTDELPEIAGLRERWGSAVFHCP----YCHG----------- 136 (297)
T ss_dssp EEEEEETTEEEEEETT-----S---CEEEEEEEEECCCCEEECCCCBTTGGGBTTTEESCH----HHHT-----------
T ss_pred EEEEEcCCeEEEEECC-----C---CEEEcCEEEECCCCCCCCCCCCCchhhcCCeeEEcc----cCcc-----------
Confidence 9999887655444321 1 1799999999999999999999975311 0000100 0000
Q ss_pred CCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccccccccHHHHHHHHHHhhcCCe
Q 010217 214 NLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGI 293 (515)
Q Consensus 214 ~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV 293 (515)
...++++|+|||+|++|+|+|..|.++ + +|+++++.+. .++ +.+.+.+++.||
T Consensus 137 -----~~~~~~~v~vvG~G~~~~e~a~~l~~~--------------g-~v~~v~~~~~---~~~----~~~~~~l~~~gv 189 (297)
T 3fbs_A 137 -----YELDQGKIGVIAASPMAIHHALMLPDW--------------G-ETTFFTNGIV---EPD----ADQHALLAARGV 189 (297)
T ss_dssp -----GGGTTCEEEEECCSTTHHHHHHHGGGT--------------S-EEEEECTTTC---CCC----HHHHHHHHHTTC
T ss_pred -----hhhcCCEEEEEecCccHHHHHHHhhhc--------------C-cEEEEECCCC---CCC----HHHHHHHHHCCc
Confidence 012567999999999999999999874 5 9999998775 222 345677888999
Q ss_pred EEEcCcEEEEEeCCeEEEEecCCCceEEEecCeEEEccCCCCccchHHHHHHhCC--C--CCC-ceeeCCCccccCCCCE
Q 010217 294 DVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ--T--NRR-ALATDEWLRVEGSDSI 368 (515)
Q Consensus 294 ~v~~~~~v~~i~~~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~~~--~--~~g-~i~vd~~l~t~~~~~I 368 (515)
+++. +.+++++.++ .+ .+.+|++ +++|.||+|+|+ .|+. .+++.+++ + .+| +|.||++++| +.|+|
T Consensus 190 ~i~~-~~v~~i~~~~-~v-~~~~g~~--~~~D~vi~a~G~--~p~~-~~~~~~g~~~~~~~~G~~i~vd~~~~t-~~~~v 260 (297)
T 3fbs_A 190 RVET-TRIREIAGHA-DV-VLADGRS--IALAGLFTQPKL--RITV-DWIEKLGCAVEEGPMGSTIVTDPMKQT-TARGI 260 (297)
T ss_dssp EEEC-SCEEEEETTE-EE-EETTSCE--EEESEEEECCEE--ECCC-SCHHHHTCCEEEETTEEEECCCTTCBC-SSTTE
T ss_pred EEEc-ceeeeeecCC-eE-EeCCCCE--EEEEEEEEccCc--ccCc-hhHHhcCCccccCCCCceEEeCCCCcc-CCCCE
Confidence 9996 8999998775 22 2356764 999999999994 6666 57788877 2 356 8999999998 99999
Q ss_pred EEeccccccCccchHHHHHHHHHhh
Q 010217 369 YALGDCATVNQRRVMEDIAAIFSKA 393 (515)
Q Consensus 369 yA~GD~~~~~~~~~~~~~~~~~~~a 393 (515)
||+|||+..+ ..+..++.++..++
T Consensus 261 ya~GD~~~~~-~~~~~A~~~g~~aa 284 (297)
T 3fbs_A 261 FACGDVARPA-GSVALAVGDGAMAG 284 (297)
T ss_dssp EECSGGGCTT-CCHHHHHHHHHHHH
T ss_pred EEEeecCCch-HHHHHHHHhHHHHH
Confidence 9999999963 34556666655444
No 58
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=100.00 E-value=1.9e-33 Score=278.23 Aligned_cols=281 Identities=17% Similarity=0.169 Sum_probs=201.9
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCcc-------chhccCcccccccccchHHHHhhcCceEEEE
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLL-------PSVTCGTVEARSIVEPVRNIVRKKNVDICFW 130 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~ 130 (515)
.++|+|||||+||+++|..|++.|++|+|||+. ..++.... +.+. ......++...+...+.+.++++ .
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~ 80 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARANLQPVLITGM-EKGGQLTTTTEVENWPGDP-NDLTGPLLMERMHEHATKFETEI--I 80 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS-STTGGGGGCSBCCCSTTCC-SSCBHHHHHHHHHHHHHHTTCEE--E
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC-CCCceEecchhhhhCCCCC-CCCCHHHHHHHHHHHHHHCCCEE--E
Confidence 579999999999999999999999999999965 33332111 1111 01122345555667777888775 4
Q ss_pred EeEEEEEecCCCEEEE-eeCCccCCCCCceEEeecCEEEEccCCCcCCCCCCCCCCcc-ccccChhHHHHHHHHHHHHHH
Q 010217 131 EAECFKIDAENKKVYC-RSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENC-NFLKEVEDAQRIRRNVIESFE 208 (515)
Q Consensus 131 ~~~v~~id~~~~~v~~-~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ipG~~~~~-~~~~~~~~a~~~~~~~~~~~~ 208 (515)
..++..++...+.+.+ .++. .+.||+||+|||+.|..|++||.+... ..+..... ....
T Consensus 81 ~~~v~~i~~~~~~~~v~~~~~----------~~~~~~lv~AtG~~~~~~~~~g~~~~~~~~~~~~~~---~~~~------ 141 (320)
T 1trb_A 81 FDHINKVDLQNRPFRLNGDNG----------EYTCDALIIATGASARYLGLPSEEAFKGRGVSACAT---SDGF------ 141 (320)
T ss_dssp CCCEEEEECSSSSEEEEESSC----------EEEEEEEEECCCEEECCCCCHHHHHTBTTTEESCHH---HHGG------
T ss_pred EeeeeEEEecCCEEEEEeCCC----------EEEcCEEEECCCCCcCCCCCCChHHhCCceeEeccc---CCcc------
Confidence 4569999987765554 3222 789999999999999888888864210 01111110 0000
Q ss_pred hcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccccccccHHHHHHHHHHh
Q 010217 209 KASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKF 288 (515)
Q Consensus 209 ~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l 288 (515)
...+++|+|||+|++|+|+|..|.++ +.+|+++++.+.+.. ++.+.+.+.+.+
T Consensus 142 -----------~~~~~~v~ViG~G~~g~e~A~~l~~~--------------g~~Vtlv~~~~~~~~--~~~~~~~l~~~l 194 (320)
T 1trb_A 142 -----------FYRNQKVAVIGGGNTAVEEALYLSNI--------------ASEVHLIHRRDGFRA--EKILIKRLMDKV 194 (320)
T ss_dssp -----------GGTTSEEEEECSSHHHHHHHHHHTTT--------------SSEEEEECSSSSCCC--CHHHHHHHHHHH
T ss_pred -----------ccCCCeEEEECCCHHHHHHHHHHHhc--------------CCeEEEEEeCCcccc--CHHHHHHHHHhc
Confidence 12567999999999999999999875 689999999887643 567778888889
Q ss_pred hcCCeEEEcCcEEEEEeCCe-----EEEEecCC-CceEEEecCeEEEccCCCCccchHHHHH-HhCCCCCCceeeCCCc-
Q 010217 289 SRDGIDVKLGSMVVKVTDKE-----IFTKVRGN-GETSSMPYGMVVWSTGIAPHAIIKDFMK-QVGQTNRRALATDEWL- 360 (515)
Q Consensus 289 ~~~gV~v~~~~~v~~i~~~~-----v~~~~~~~-G~~~~i~~D~vi~a~G~~~~p~~~~l~~-~~~~~~~g~i~vd~~l- 360 (515)
++.||++++++.+++++.++ +.+....+ |+..+++||.||+|+| ..|++ .+++ .+.++ +|+|.||+++
T Consensus 195 ~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G--~~p~~-~~~~~~l~~~-~G~i~vd~~~~ 270 (320)
T 1trb_A 195 ENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIG--HSPNT-AIFEGQLELE-NGYIKVQSGIH 270 (320)
T ss_dssp HTSSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSC--EEESC-GGGTTTSCEE-TTEECCCCSSS
T ss_pred ccCCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeC--CCCCh-HHhccccccc-CceEEECCCcc
Confidence 99999999999999997543 44433222 5444699999999999 46776 4444 23336 8999999997
Q ss_pred ----cccCCCCEEEeccccccCccchHHHHHHHHHhh
Q 010217 361 ----RVEGSDSIYALGDCATVNQRRVMEDIAAIFSKA 393 (515)
Q Consensus 361 ----~t~~~~~IyA~GD~~~~~~~~~~~~~~~~~~~a 393 (515)
+| +.|+|||+|||+..+...+..++.++..+|
T Consensus 271 ~~~~~t-~~~~vya~GD~~~~~~~~~~~A~~~g~~aa 306 (320)
T 1trb_A 271 GNATQT-SIPGVFAAGDVMDHIYRQAITSAGTGCMAA 306 (320)
T ss_dssp SCTTBC-SSTTEEECGGGGCSSSCCHHHHHHHHHHHH
T ss_pred cccccC-CCCCEEEcccccCCcchhhhhhhccHHHHH
Confidence 66 899999999999986666677777766554
No 59
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=100.00 E-value=1e-33 Score=297.17 Aligned_cols=269 Identities=20% Similarity=0.271 Sum_probs=200.9
Q ss_pred CCeEEEECCcHHHHHHHHhccCC---CCeEEEEcCCCCCccCCccchh--------------------ccCc--------
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNP---SYDVQVISPRNYFAFTPLLPSV--------------------TCGT-------- 106 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~---g~~V~vie~~~~~~~~~~~~~~--------------------~~g~-------- 106 (515)
.+||||||||+||++||.+|++. |++|+|||+++ ++++.....+ ..+.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~~~~ 80 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDDAK 80 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC------C
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccCCCc
Confidence 47999999999999999999977 99999999987 5553211100 0011
Q ss_pred ccccc-----------cccchHHHHhhcCceEEEEEeEEEEEecC----CCEEEEeeCCccCCCCCceEEeecCEEEEcc
Q 010217 107 VEARS-----------IVEPVRNIVRKKNVDICFWEAECFKIDAE----NKKVYCRSSQNTNLNGKEEFCMDYDYLVIAM 171 (515)
Q Consensus 107 ~~~~~-----------~~~~~~~~~~~~~i~v~~~~~~v~~id~~----~~~v~~~~~~~~~~~~~~~~~~~~d~lviAt 171 (515)
.+... +...+..++++.++++ ..+++..++.. ++.+.+... +++...+.||+||+||
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~--~~g~~~~i~~~~~~~~~~~~V~~~------~g~~~~~~~d~lviAT 152 (499)
T 1xdi_A 81 ISLPQIHARVKTLAAAQSADITAQLLSMGVQV--IAGRGELIDSTPGLARHRIKATAA------DGSTSEHEADVVLVAT 152 (499)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEE--EESEEEECCSSSCCSSEEEEEECT------TSCEEEEEESEEEECC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEeEEEEecCcccCCCCEEEEEeC------CCcEEEEEeCEEEEcC
Confidence 01111 1112355667788774 56668888872 245555432 2222378999999999
Q ss_pred CCCcCCCCCCCCCCc-cccccChhHHHHHHHHHHHHHHhcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHH
Q 010217 172 GARANTFNTPGVEEN-CNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDL 250 (515)
Q Consensus 172 G~~~~~~~ipG~~~~-~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~ 250 (515)
|+.|..|++||.+.. ++. ..++.. +. ..+++++|||+|++|+|+|..+.++
T Consensus 153 Gs~p~~p~i~g~~~~~v~~---~~~~~~-------------~~-------~~~~~vvViGgG~ig~E~A~~l~~~----- 204 (499)
T 1xdi_A 153 GASPRILPSAQPDGERILT---WRQLYD-------------LD-------ALPDHLIVVGSGVTGAEFVDAYTEL----- 204 (499)
T ss_dssp CEEECCCGGGCCCSSSEEE---GGGGGG-------------CS-------SCCSSEEEESCSHHHHHHHHHHHHT-----
T ss_pred CCCCCCCCCCCCCcCcEEe---hhHhhh-------------hh-------ccCCeEEEECCCHHHHHHHHHHHHc-----
Confidence 999999999987532 222 221111 11 1346999999999999999999886
Q ss_pred HhhCcccCCCcEEEEEeccccccccccHHHHHHHHHHhhcCCeEEEcCcEEEEEeCC--eEEEEecCCCceEEEecCeEE
Q 010217 251 FKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTDK--EIFTKVRGNGETSSMPYGMVV 328 (515)
Q Consensus 251 ~~~~p~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~--~v~~~~~~~G~~~~i~~D~vi 328 (515)
+.+|+++++.+++++.+++++.+.+.+.+++.||++++++.|++++.+ ++.+.. .+|++ +++|.||
T Consensus 205 ---------g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~v~~-~~g~~--i~aD~Vv 272 (499)
T 1xdi_A 205 ---------GVPVTVVASQDHVLPYEDADAALVLEESFAERGVRLFKNARAASVTRTGAGVLVTM-TDGRT--VEGSHAL 272 (499)
T ss_dssp ---------TCCEEEECSSSSSSCCSSHHHHHHHHHHHHHTTCEEETTCCEEEEEECSSSEEEEE-TTSCE--EEESEEE
T ss_pred ---------CCeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCEEEEEE-CCCcE--EEcCEEE
Confidence 689999999999999999999999999999999999999999999753 365543 56664 9999999
Q ss_pred EccCCCCccchHHH--HHHhCC--CCCCceeeCCCccccCCCCEEEeccccccCc
Q 010217 329 WSTGIAPHAIIKDF--MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCATVNQ 379 (515)
Q Consensus 329 ~a~G~~~~p~~~~l--~~~~~~--~~~g~i~vd~~l~t~~~~~IyA~GD~~~~~~ 379 (515)
+|+| ..|++ .+ ++.+++ +.+|+|.||+++|| +.|+|||+|||+..+.
T Consensus 273 ~a~G--~~p~~-~~l~l~~~gl~~~~~G~i~Vd~~~~t-~~~~IyA~GD~~~~~~ 323 (499)
T 1xdi_A 273 MTIG--SVPNT-SGLGLERVGIQLGRGNYLTVDRVSRT-LATGIYAAGDCTGLLP 323 (499)
T ss_dssp ECCC--EEECC-SSSCTTTTTCCCBTTTBCCCCSSSBC-SSTTEEECSGGGTSCS
T ss_pred ECCC--CCcCC-CcCCchhcCceECCCCCEEECCCccc-CCCCEEEEeccCCCcc
Confidence 9999 57877 44 667776 56789999999998 9999999999998653
No 60
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=100.00 E-value=2e-33 Score=293.89 Aligned_cols=282 Identities=21% Similarity=0.262 Sum_probs=199.5
Q ss_pred CCCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCC---C------CCccCCccchhc--------------------cCc
Q 010217 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR---N------YFAFTPLLPSVT--------------------CGT 106 (515)
Q Consensus 56 ~~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~---~------~~~~~~~~~~~~--------------------~g~ 106 (515)
...+||+||||||||++||..|++.|++|+|||+. + .+|++++...+. .+.
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~~g~ 86 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAYGW 86 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTB
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHhcCc
Confidence 34689999999999999999999999999999942 1 245443221110 011
Q ss_pred -------ccccccccc-----------hHHHHhhcCceEEEEEeEEEEEecCCCEEEEeeCCccCCCCCceEEeecCEEE
Q 010217 107 -------VEARSIVEP-----------VRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLV 168 (515)
Q Consensus 107 -------~~~~~~~~~-----------~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lv 168 (515)
.+...+... +...+...+++ ++.+++..++.. .+.+... ++ ..++.||+||
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~g~a~~~~~~--~v~v~~~------~g-~~~~~~d~lv 155 (483)
T 3dgh_A 87 NVDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVE--YINGLGSFVDSH--TLLAKLK------SG-ERTITAQTFV 155 (483)
T ss_dssp CCCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EECSEEEEEETT--EEEEECT------TC-CEEEEEEEEE
T ss_pred ccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEeEEEEccCC--EEEEEeC------CC-eEEEEcCEEE
Confidence 011111111 12234556755 678888888765 4444322 12 2479999999
Q ss_pred EccCCCcCCCCCCCCCCccccccChhHHHHHHHHHHHHHHhcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHH
Q 010217 169 IAMGARANTFNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDE 248 (515)
Q Consensus 169 iAtG~~~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~ 248 (515)
||||+.|+.|++||.++..+ +.++. + .++. .+++++|||+|++|+|+|..+.++
T Consensus 156 iATGs~p~~p~i~G~~~~~~---~~~~~----------~---~~~~-------~~~~vvViGgG~~g~E~A~~l~~~--- 209 (483)
T 3dgh_A 156 IAVGGRPRYPDIPGAVEYGI---TSDDL----------F---SLDR-------EPGKTLVVGAGYIGLECAGFLKGL--- 209 (483)
T ss_dssp ECCCEEECCCSSTTHHHHCB---CHHHH----------T---TCSS-------CCCEEEEECCSHHHHHHHHHHHHT---
T ss_pred EeCCCCcCCCCCCCcccccC---cHHHH----------h---hhhh-------cCCcEEEECCCHHHHHHHHHHHHc---
Confidence 99999999999999754322 21111 1 1111 346999999999999999999986
Q ss_pred HHHhhCcccCCCcEEEEEeccccccccccHHHHHHHHHHhhcCCeEEEcCcEEEEEeC--Ce---EEEEecCCCceEEEe
Q 010217 249 DLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KE---IFTKVRGNGETSSMP 323 (515)
Q Consensus 249 ~~~~~~p~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~--~~---v~~~~~~~G~~~~i~ 323 (515)
+.+|+++++ +.+++.+++++.+.+.+.|++.||++++++.+.+++. ++ +.+.+..+|+..+++
T Consensus 210 -----------g~~Vtlv~~-~~~l~~~d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~ 277 (483)
T 3dgh_A 210 -----------GYEPTVMVR-SIVLRGFDQQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDV 277 (483)
T ss_dssp -----------TCEEEEEES-SCSSTTSCHHHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEE
T ss_pred -----------CCEEEEEeC-CCCCcccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEE
Confidence 689999998 5688889999999999999999999999999999974 32 333332335555699
Q ss_pred cCeEEEccCCCCccchHHH-HHHhCC--CCCCceeeCCCccccCCCCEEEeccccccCccchHHHHHHHH
Q 010217 324 YGMVVWSTGIAPHAIIKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCATVNQRRVMEDIAAIF 390 (515)
Q Consensus 324 ~D~vi~a~G~~~~p~~~~l-~~~~~~--~~~g~i~vd~~l~t~~~~~IyA~GD~~~~~~~~~~~~~~~~~ 390 (515)
+|.||+|+| ..|++..+ ++.+++ +. |+|.||+++|| +.|+|||+|||+...+.....+..++.
T Consensus 278 ~D~vi~a~G--~~p~~~~l~l~~~gl~~~~-G~i~vd~~~~t-~~~~IyA~GD~~~~~~~~~~~A~~~g~ 343 (483)
T 3dgh_A 278 YDTVLWAIG--RKGLVDDLNLPNAGVTVQK-DKIPVDSQEAT-NVANIYAVGDIIYGKPELTPVAVLAGR 343 (483)
T ss_dssp ESEEEECSC--EEECCGGGTGGGTTCCCBT-TBBCCCTTCBC-SSTTEEECSTTBTTSCCCHHHHHHHHH
T ss_pred cCEEEECcc--cccCcCcCCchhcCccccC-CEEEECcCCcc-CCCCEEEEEcccCCCCccHHHHHHHHH
Confidence 999999999 57887443 367777 45 99999999998 999999999998543333334444443
No 61
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=100.00 E-value=2.7e-33 Score=278.32 Aligned_cols=278 Identities=12% Similarity=0.188 Sum_probs=203.3
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCc--cchh----ccCc--ccccccccchHHHHhhcCceEEE
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPL--LPSV----TCGT--VEARSIVEPVRNIVRKKNVDICF 129 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~--~~~~----~~g~--~~~~~~~~~~~~~~~~~~i~v~~ 129 (515)
.++|+|||||+||++||..|++.|++|+|||+++.+++... .+.. ..+. ....++...+...+.+++++++
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 85 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKFDQTIC- 85 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTSCCEEE-
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHhCCcEE-
Confidence 47999999999999999999999999999999988775421 1110 1111 1234566667777888887763
Q ss_pred EEeEEEEEecCCC-EEEEeeCCccCCCCCceEEeecCEEEEccCC---CcCCCCCCCCCCc---cccccChhHHHHHHHH
Q 010217 130 WEAECFKIDAENK-KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGA---RANTFNTPGVEEN---CNFLKEVEDAQRIRRN 202 (515)
Q Consensus 130 ~~~~v~~id~~~~-~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~---~~~~~~ipG~~~~---~~~~~~~~~a~~~~~~ 202 (515)
.+++|+.++...+ .+.+... ++ ++.||+||+|||+ .|+.+++||.+.. .... .+.+
T Consensus 86 ~~~~v~~i~~~~~~~~~v~~~------~g---~~~~d~vVlAtG~~~~~p~~~~~~g~~~~~g~~~~~-~~~~------- 148 (332)
T 3lzw_A 86 LEQAVESVEKQADGVFKLVTN------EE---THYSKTVIITAGNGAFKPRKLELENAEQYEGKNLHY-FVDD------- 148 (332)
T ss_dssp CSCCEEEEEECTTSCEEEEES------SE---EEEEEEEEECCTTSCCEECCCCCTTGGGGBTTTEES-SCSC-------
T ss_pred ccCEEEEEEECCCCcEEEEEC------CC---EEEeCEEEECCCCCcCCCCCCCCCChhhccCceEEE-ecCC-------
Confidence 4789999998776 3333321 11 4899999999999 8888899997531 1111 1111
Q ss_pred HHHHHHhcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccccccccHHHHH
Q 010217 203 VIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITA 282 (515)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~~~~~~~~~ 282 (515)
....++++++|||+|++|+|+|..|.++ +.+|+++++.+.+.+. +..
T Consensus 149 ---------------~~~~~~~~v~vvG~g~~~~e~a~~l~~~--------------~~~v~~~~~~~~~~~~-~~~--- 195 (332)
T 3lzw_A 149 ---------------LQKFAGRRVAILGGGDSAVDWALMLEPI--------------AKEVSIIHRRDKFRAH-EHS--- 195 (332)
T ss_dssp ---------------GGGGBTCEEEEECSSHHHHHHHHHHTTT--------------BSEEEEECSSSSCSSC-HHH---
T ss_pred ---------------HHHcCCCEEEEECCCHhHHHHHHHHHhh--------------CCeEEEEEecCcCCcc-HHH---
Confidence 1112567999999999999999999875 5799999999887432 222
Q ss_pred HHHHHhhcCCeEEEcCcEEEEEeCCe----EEEEecCCCceEEEecCeEEEccCCCCccchHHHHHHhCC-CCCCceeeC
Q 010217 283 FAEEKFSRDGIDVKLGSMVVKVTDKE----IFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ-TNRRALATD 357 (515)
Q Consensus 283 ~~~~~l~~~gV~v~~~~~v~~i~~~~----v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~~~-~~~g~i~vd 357 (515)
.+.+++.||++++++.+.+++.++ +.+.+..+|+..++++|.||+|+| ..|+. .+++.+++ ..+|+|.||
T Consensus 196 --~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G--~~p~~-~~~~~~~~~~~~g~i~vd 270 (332)
T 3lzw_A 196 --VENLHASKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEILEIDDLIVNYG--FVSSL-GPIKNWGLDIEKNSIVVK 270 (332)
T ss_dssp --HHHHHHSSCEEETTEEEEEEECSSSCCEEEEEETTSCCEEEEECSEEEECCC--EECCC-GGGGGSSCCEETTEEECC
T ss_pred --HHHHhcCCeEEEeCceeeEEecCCceEEEEEEecCCCceEEEECCEEEEeec--cCCCc-hHHhhcCccccCCeEEeC
Confidence 245788999999999999998643 666654556666799999999999 46766 56777777 467899999
Q ss_pred CCccccCCCCEEEeccccccC--ccchHHHHHHHHHh
Q 010217 358 EWLRVEGSDSIYALGDCATVN--QRRVMEDIAAIFSK 392 (515)
Q Consensus 358 ~~l~t~~~~~IyA~GD~~~~~--~~~~~~~~~~~~~~ 392 (515)
++++| +.|+|||+|||+..+ ...+..++.++..+
T Consensus 271 ~~~~t-~~~~vya~GD~~~~~~~~~~~~~A~~~g~~a 306 (332)
T 3lzw_A 271 STMET-NIEGFFAAGDICTYEGKVNLIASGFGEAPTA 306 (332)
T ss_dssp TTSBC-SSTTEEECGGGEECTTCCCCHHHHHHHHHHH
T ss_pred CCCce-ecCCEEEccceecCCCCcceEeeehhhHHHH
Confidence 99998 999999999999653 23344455554433
No 62
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=100.00 E-value=4.3e-33 Score=291.17 Aligned_cols=273 Identities=19% Similarity=0.269 Sum_probs=193.1
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhc---------------------cCcc-------cc
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVT---------------------CGTV-------EA 109 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~---------------------~g~~-------~~ 109 (515)
.+||+|||||+||+++|..|++.|++|+|||+++.+++++....+. .+.. +.
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~~~~~~~ 84 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNGDIKINV 84 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECSCEEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCH
Confidence 4799999999999999999999999999999987776543211100 0100 00
Q ss_pred cccc-----------cchHHHHhhcCceEEEEEeEEEEEecCCCEEEEeeCCccCCCCCceEE------eecCEEEEccC
Q 010217 110 RSIV-----------EPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFC------MDYDYLVIAMG 172 (515)
Q Consensus 110 ~~~~-----------~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~------~~~d~lviAtG 172 (515)
..+. ..+...+++.++++ ..+++..++ .+.+.+.... +. ... +.||+||+|||
T Consensus 85 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~--~~g~~~~~~--~~~v~V~~~~-----G~-~~~~~~~~~i~~d~lViAtG 154 (478)
T 1v59_A 85 ANFQKAKDDAVKQLTGGIELLFKKNKVTY--YKGNGSFED--ETKIRVTPVD-----GL-EGTVKEDHILDVKNIIVATG 154 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEE--EESEEEESS--SSEEEEECCT-----TC-TTCCSSCEEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEEEEEEcc--CCeEEEEecC-----CC-cccccccceEEeCEEEECcC
Confidence 0000 11234566678775 344444443 3455554211 10 114 89999999999
Q ss_pred CCcCCCCCCCCCCccccccChhHHHHHHHHHHHHHHhcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHh
Q 010217 173 ARANTFNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFK 252 (515)
Q Consensus 173 ~~~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~ 252 (515)
++|. .+||.......+.+.+++.. +.. .+++++|||+|++|+|+|..|.++
T Consensus 155 s~p~--~~~g~~~~~~~v~~~~~~~~-------------~~~-------~~~~vvViGgG~~g~e~A~~l~~~------- 205 (478)
T 1v59_A 155 SEVT--PFPGIEIDEEKIVSSTGALS-------------LKE-------IPKRLTIIGGGIIGLEMGSVYSRL------- 205 (478)
T ss_dssp EEEC--CCTTCCCCSSSEECHHHHTT-------------CSS-------CCSEEEEECCSHHHHHHHHHHHHT-------
T ss_pred CCCC--CCCCCCCCCceEEcHHHHHh-------------hhc-------cCceEEEECCCHHHHHHHHHHHHc-------
Confidence 9884 45665311122334333221 111 246999999999999999999986
Q ss_pred hCcccCCCcEEEEEeccccccccccHHHHHHHHHHhhcCCeEEEcCcEEEEEeC---Ce-EEEEe--cCCCceEEEecCe
Q 010217 253 LYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTD---KE-IFTKV--RGNGETSSMPYGM 326 (515)
Q Consensus 253 ~~p~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~---~~-v~~~~--~~~G~~~~i~~D~ 326 (515)
+.+|+++++.+++++.+++++.+.+.+.+++.||++++++.|++++. ++ +.+.. ..+|+..++++|.
T Consensus 206 -------g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~ 278 (478)
T 1v59_A 206 -------GSKVTVVEFQPQIGASMDGEVAKATQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEV 278 (478)
T ss_dssp -------TCEEEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESE
T ss_pred -------CCEEEEEEeCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCE
Confidence 68999999999999999999999999999999999999999999975 22 33322 1234434699999
Q ss_pred EEEccCCCCccchHH-HHHHhCC--CCCCceeeCCCccccCCCCEEEeccccccCc
Q 010217 327 VVWSTGIAPHAIIKD-FMKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCATVNQ 379 (515)
Q Consensus 327 vi~a~G~~~~p~~~~-l~~~~~~--~~~g~i~vd~~l~t~~~~~IyA~GD~~~~~~ 379 (515)
||+|+| ..|++.. +++.+++ +.+|+|.||+++|| +.|+|||+|||+..+.
T Consensus 279 vv~a~G--~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~~~ 331 (478)
T 1v59_A 279 LLVAVG--RRPYIAGLGAEKIGLEVDKRGRLVIDDQFNS-KFPHIKVVGDVTFGPM 331 (478)
T ss_dssp EEECSC--EEECCTTSCTTTTTCCBCTTSCBCCCTTSBC-SSTTEEECGGGSSSCC
T ss_pred EEECCC--CCcCCCCCCchhcCceeCCCCCEeECcCCcc-CCCCEEEeeccCCCcc
Confidence 999999 5787743 4677777 56789999999998 9999999999998653
No 63
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=100.00 E-value=7.2e-33 Score=278.88 Aligned_cols=279 Identities=17% Similarity=0.242 Sum_probs=199.5
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCc--cchh----ccCc--ccccccccchHHHHhhcCceEEE
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPL--LPSV----TCGT--VEARSIVEPVRNIVRKKNVDICF 129 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~--~~~~----~~g~--~~~~~~~~~~~~~~~~~~i~v~~ 129 (515)
.+||+|||||+||+++|..|++.|++|+|||+.+.+++... .+.. ..+. ....++...+.+.+.++++++.
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~- 92 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAERYNPDVV- 92 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHHTTCCEEE-
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHHHHHHHHhCCEEE-
Confidence 57999999999999999999999999999999887765421 1110 1111 1223455556667777787763
Q ss_pred EEeEEEEEecCCC-EEEEeeCCccCCCCCceEEeecCEEEEccCC---CcCCCCCCC-CCCc----ccc-ccChhHHHHH
Q 010217 130 WEAECFKIDAENK-KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGA---RANTFNTPG-VEEN----CNF-LKEVEDAQRI 199 (515)
Q Consensus 130 ~~~~v~~id~~~~-~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~---~~~~~~ipG-~~~~----~~~-~~~~~~a~~~ 199 (515)
.+.+|+.++...+ .+.+.... + ..+.||+||+|||+ .|..+++|| .+.. +++ +++.+
T Consensus 93 ~~~~v~~i~~~~~~~~~v~~~~-----g---~~~~~~~li~AtG~~~~~~~~~~i~g~~~~~~~~~v~~~~~~~~----- 159 (360)
T 3ab1_A 93 LNETVTKYTKLDDGTFETRTNT-----G---NVYRSRAVLIAAGLGAFEPRKLPQLGNIDHLTGSSVYYAVKSVE----- 159 (360)
T ss_dssp CSCCEEEEEECTTSCEEEEETT-----S---CEEEEEEEEECCTTCSCCBCCCGGGCCCTTTBTTTEESSCSCGG-----
T ss_pred cCCEEEEEEECCCceEEEEECC-----C---cEEEeeEEEEccCCCcCCCCCCCCCCchhhCcCceEEEecCCHH-----
Confidence 4678999987654 33333211 1 17899999999999 566777888 5321 111 11110
Q ss_pred HHHHHHHHHhcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccccccccHH
Q 010217 200 RRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKR 279 (515)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~~~~~~ 279 (515)
...+++|+|||+|++|+|+|..|.++ +.+|+++++.+.+++. +.
T Consensus 160 --------------------~~~~~~vvVvG~G~~g~e~A~~l~~~--------------g~~V~lv~~~~~~~~~--~~ 203 (360)
T 3ab1_A 160 --------------------DFKGKRVVIVGGGDSALDWTVGLIKN--------------AASVTLVHRGHEFQGH--GK 203 (360)
T ss_dssp --------------------GGTTCEEEEECSSHHHHHHHHHTTTT--------------SSEEEEECSSSSCSSC--SH
T ss_pred --------------------HcCCCcEEEECCCHHHHHHHHHHHhc--------------CCEEEEEEcCCCCCCC--HH
Confidence 12467999999999999999999875 6899999998877553 34
Q ss_pred HHHHHHHHhhcCCeEEEcCcEEEEEeC--Ce---EEEEecCCCceEEEecCeEEEccCCCCccchHHHHHHhCC-CCCCc
Q 010217 280 ITAFAEEKFSRDGIDVKLGSMVVKVTD--KE---IFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ-TNRRA 353 (515)
Q Consensus 280 ~~~~~~~~l~~~gV~v~~~~~v~~i~~--~~---v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~~~-~~~g~ 353 (515)
..+.+.+.+++.||++++++++.+++. +. +.+. ..+|+..++++|.||+|+|+ .|+. .+++.+++ ..+|+
T Consensus 204 ~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~-~~~g~~~~i~~D~vi~a~G~--~p~~-~~l~~~~~~~~~g~ 279 (360)
T 3ab1_A 204 TAHEVERARANGTIDVYLETEVASIEESNGVLTRVHLR-SSDGSKWTVEADRLLILIGF--KSNL-GPLARWDLELYENA 279 (360)
T ss_dssp HHHSSHHHHHHTSEEEESSEEEEEEEEETTEEEEEEEE-ETTCCEEEEECSEEEECCCB--CCSC-GGGGGSSCCEETTE
T ss_pred HHHHHHHHhhcCceEEEcCcCHHHhccCCCceEEEEEE-ecCCCeEEEeCCEEEECCCC--CCCH-HHHHhhccccccCe
Confidence 566677788889999999999999975 33 3443 24675557999999999994 6666 56677777 24789
Q ss_pred eeeCCCccccCCCCEEEeccccccCc--cchHHHHHHHHH
Q 010217 354 LATDEWLRVEGSDSIYALGDCATVNQ--RRVMEDIAAIFS 391 (515)
Q Consensus 354 i~vd~~l~t~~~~~IyA~GD~~~~~~--~~~~~~~~~~~~ 391 (515)
|.||+++|| ++|+|||+|||+..+. .....++.++..
T Consensus 280 i~vd~~~~t-~~~~vya~GD~~~~~~~~~~~~~A~~~g~~ 318 (360)
T 3ab1_A 280 LVVDSHMKT-SVDGLYAAGDIAYYPGKLKIIQTGLSEATM 318 (360)
T ss_dssp EECCTTSBC-SSTTEEECSTTEECTTCCCSHHHHHHHHHH
T ss_pred eeecCCCcC-CCCCEEEecCccCCCCccceeehhHHHHHH
Confidence 999999998 9999999999998642 333444444443
No 64
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=100.00 E-value=3.6e-33 Score=290.45 Aligned_cols=264 Identities=21% Similarity=0.282 Sum_probs=197.1
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhc--------------------cC------ccccc-
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVT--------------------CG------TVEAR- 110 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~--------------------~g------~~~~~- 110 (515)
.+||+|||||+||++||..|++.|++|+|||+ +.+|++.....+. .+ ..+..
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 83 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE-FRYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGESRFDWAK 83 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECCCEECHHH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC-CCCCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCCCCcCHHH
Confidence 57999999999999999999999999999999 5566532211000 00 00000
Q ss_pred ----------ccccchHHHHhhcCceEEEEEeEEEEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcC-CCC
Q 010217 111 ----------SIVEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARAN-TFN 179 (515)
Q Consensus 111 ----------~~~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~-~~~ 179 (515)
.+...+..++.+.+++ +..+++..++. +.+.+.. ++ ..+.||+||||||+.|. .|+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~gv~--~~~g~~~~i~~--~~v~~~~-------~~--~~~~~d~lviAtG~~p~~~p~ 150 (463)
T 4dna_A 84 LVAAKEQEIARLEGLYRKGLANAGAE--ILDTRAELAGP--NTVKLLA-------SG--KTVTAERIVIAVGGHPSPHDA 150 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCE--EEESCEEESSS--SEEEETT-------TT--EEEEEEEEEECCCEEECCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCE--EEEEEEEEeeC--CEEEEec-------CC--eEEEeCEEEEecCCCcccCCC
Confidence 1111233445566766 55677777764 4666621 11 27999999999999999 999
Q ss_pred CCCCCCccccccChhHHHHHHHHHHHHHHhcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCC
Q 010217 180 TPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKD 259 (515)
Q Consensus 180 ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~ 259 (515)
+||.+ .+ .+.++.. .+. ..+++++|||+|++|+|+|..+.++
T Consensus 151 i~G~~-~~---~~~~~~~-------------~~~-------~~~~~v~ViGgG~~g~e~A~~l~~~-------------- 192 (463)
T 4dna_A 151 LPGHE-LC---ITSNEAF-------------DLP-------ALPESILIAGGGYIAVEFANIFHGL-------------- 192 (463)
T ss_dssp STTGG-GC---BCHHHHT-------------TCS-------SCCSEEEEECCSHHHHHHHHHHHHT--------------
T ss_pred CCCcc-cc---ccHHHHh-------------hhh-------cCCCeEEEECCCHHHHHHHHHHHHc--------------
Confidence 99974 22 2222211 111 1356999999999999999999986
Q ss_pred CcEEEEEeccccccccccHHHHHHHHHHhhcCCeEEEcCcEEEEEeCC--e-EEEEecCCCceEEEecCeEEEccCCCCc
Q 010217 260 SVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTDK--E-IFTKVRGNGETSSMPYGMVVWSTGIAPH 336 (515)
Q Consensus 260 ~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~--~-v~~~~~~~G~~~~i~~D~vi~a~G~~~~ 336 (515)
+.+|+++++.+++++.+++++.+.+.+.+++.||++++++.|++++.+ + +.+..+.+|+ +++|.||+|+| ..
T Consensus 193 g~~Vt~v~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~---i~aD~Vv~a~G--~~ 267 (463)
T 4dna_A 193 GVKTTLIYRGKEILSRFDQDMRRGLHAAMEEKGIRILCEDIIQSVSADADGRRVATTMKHGE---IVADQVMLALG--RM 267 (463)
T ss_dssp TCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSCEEEEESSSCE---EEESEEEECSC--EE
T ss_pred CCeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCEEEEEEcCCCe---EEeCEEEEeeC--cc
Confidence 689999999999999999999999999999999999999999999753 3 3333145675 89999999999 57
Q ss_pred cchHHH-HHHhCC--CCCCceeeCCCccccCCCCEEEeccccccCc
Q 010217 337 AIIKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCATVNQ 379 (515)
Q Consensus 337 p~~~~l-~~~~~~--~~~g~i~vd~~l~t~~~~~IyA~GD~~~~~~ 379 (515)
|++..+ ++.+++ +.+|+|.||+++|| +.|+|||+|||+..+.
T Consensus 268 p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~iya~GD~~~~~~ 312 (463)
T 4dna_A 268 PNTNGLGLEAAGVRTNELGAIIVDAFSRT-STPGIYALGDVTDRVQ 312 (463)
T ss_dssp ESCTTSSTGGGTCCBCTTSCBCCCTTCBC-SSTTEEECSGGGSSCC
T ss_pred cCCCCCCccccCceECCCCCEeECcCCCC-CCCCEEEEEecCCCCC
Confidence 777433 677777 67899999999997 9999999999998543
No 65
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=3.4e-33 Score=289.95 Aligned_cols=263 Identities=20% Similarity=0.293 Sum_probs=194.0
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhc-----------------------cCcc------c
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVT-----------------------CGTV------E 108 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~-----------------------~g~~------~ 108 (515)
.+||+|||||+||++||..|++.|++|+|||+ +.+++++....+. .|.. +
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 83 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVASPRLD 83 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCCCCCCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcccCCCccC
Confidence 58999999999999999999999999999999 5565542211000 1111 0
Q ss_pred cccccc-----------chHHHHhhcCceEEEEEeEEEEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCC
Q 010217 109 ARSIVE-----------PVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (515)
Q Consensus 109 ~~~~~~-----------~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~ 177 (515)
...+.. .+..++++.++++ ..+++..++ .+.|.+.+ ..+.||+||||||++|+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~--~~g~~~~~~--~~~v~v~~-----------~~~~~d~lviATGs~p~~ 148 (458)
T 1lvl_A 84 IGQSVAWKDGIVDRLTTGVAALLKKHGVKV--VHGWAKVLD--GKQVEVDG-----------QRIQCEHLLLATGSSSVE 148 (458)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEE--ECSCEEEEE--TTEEEETT-----------EEEECSEEEECCCEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCcEE--EEEEEEEcc--CCEEEEee-----------EEEEeCEEEEeCCCCCCC
Confidence 111111 1234566778774 455565665 45776642 279999999999999977
Q ss_pred CC-CCCCCCccccccChhHHHHHHHHHHHHHHhcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcc
Q 010217 178 FN-TPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPK 256 (515)
Q Consensus 178 ~~-ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~ 256 (515)
|+ +|. +.. +.+.+++.. +. ..+++++|||||++|+|+|..|.++
T Consensus 149 ~~~~~~-~~~---v~~~~~~~~-------------~~-------~~~~~vvViGgG~~g~e~A~~l~~~----------- 193 (458)
T 1lvl_A 149 LPMLPL-GGP---VISSTEALA-------------PK-------ALPQHLVVVGGGYIGLELGIAYRKL----------- 193 (458)
T ss_dssp BTTBCC-BTT---EECHHHHTC-------------CS-------SCCSEEEEECCSHHHHHHHHHHHHH-----------
T ss_pred CCCCCc-cCc---EecHHHHhh-------------hh-------ccCCeEEEECcCHHHHHHHHHHHHC-----------
Confidence 65 552 222 223322211 11 1356999999999999999999986
Q ss_pred cCCCcEEEEEeccccccccccHHHHHHHHHHhhcCCeEEEcCcEEEEEeCCeEEEEecCCCceEEEecCeEEEccCCCCc
Q 010217 257 VKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIAPH 336 (515)
Q Consensus 257 ~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~ 336 (515)
+.+|+++++.+++++.+++++.+.+.+.+++.||++++++.|++++.+++.+. ..+|+..++++|.||+|+| ..
T Consensus 194 ---g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~v~v~-~~~G~~~~i~~D~vv~a~G--~~ 267 (458)
T 1lvl_A 194 ---GAQVSVVEARERILPTYDSELTAPVAESLKKLGIALHLGHSVEGYENGCLLAN-DGKGGQLRLEADRVLVAVG--RR 267 (458)
T ss_dssp ---TCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEETTCEEEEEETTEEEEE-CSSSCCCEECCSCEEECCC--EE
T ss_pred ---CCeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEECCEEEEEEeCCEEEE-ECCCceEEEECCEEEECcC--CC
Confidence 68999999999999999999999999999999999999999999987545554 3456433599999999999 57
Q ss_pred cchHHH-HHHhCC--CCCCceeeCCCccccCCCCEEEeccccccCc
Q 010217 337 AIIKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCATVNQ 379 (515)
Q Consensus 337 p~~~~l-~~~~~~--~~~g~i~vd~~l~t~~~~~IyA~GD~~~~~~ 379 (515)
|++..+ ++.+++ +.+ +|.||+++|| +.|+|||+|||+..+.
T Consensus 268 p~~~~l~~~~~g~~~~~~-~i~vd~~~~t-~~~~Iya~GD~~~~~~ 311 (458)
T 1lvl_A 268 PRTKGFNLECLDLKMNGA-AIAIDERCQT-SMHNVWAIGDVAGEPM 311 (458)
T ss_dssp ECCSSSSGGGSCCCEETT-EECCCTTCBC-SSTTEEECGGGGCSSC
T ss_pred cCCCCCCcHhcCCcccCC-EEeECCCCcC-CCCCEEEeeccCCCcc
Confidence 777433 567777 445 9999999997 8999999999998653
No 66
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=100.00 E-value=9.4e-33 Score=271.40 Aligned_cols=277 Identities=13% Similarity=0.124 Sum_probs=186.1
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCC-ccchhcc-CcccccccccchHHHHhhcCceEEEEEeEEE
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTP-LLPSVTC-GTVEARSIVEPVRNIVRKKNVDICFWEAECF 135 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~-~~~~~~~-g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~ 135 (515)
.+||+||||||||++||.+|++.|++|+|||++...+... ..+.+.. ....+.++.....+.+.+++. +.+...++.
T Consensus 6 ~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 84 (304)
T 4fk1_A 6 YIDCAVIGAGPAGLNASLVLGRARKQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKYPS-VHYYEKTVV 84 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTSTT-EEEEECCEE
T ss_pred CcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhcCC-EEEEeeEEE
Confidence 5799999999999999999999999999999875422211 1121111 111222333444445555543 335666666
Q ss_pred EEecCC-C--EEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCCCCCCCCcc-ccccChhHHHHHHHHHHHHHHhcC
Q 010217 136 KIDAEN-K--KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENC-NFLKEVEDAQRIRRNVIESFEKAS 211 (515)
Q Consensus 136 ~id~~~-~--~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ipG~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~ 211 (515)
.++... . .+.+.++. ++.||+||||||++|+.|++||.++.. ..+..... . +.
T Consensus 85 ~~~~~~~~~~~v~~~~g~----------~~~a~~liiATGs~p~~p~i~G~~~~~~~~v~~~~~---~-----~~----- 141 (304)
T 4fk1_A 85 MITKQSTGLFEIVTKDHT----------KYLAERVLLATGMQEEFPSIPNVREYYGKSLFSCPY---C-----DG----- 141 (304)
T ss_dssp EEEECTTSCEEEEETTCC----------EEEEEEEEECCCCEEECCSCTTHHHHBTTTEESCHH---H-----HS-----
T ss_pred EeeecCCCcEEEEECCCC----------EEEeCEEEEccCCccccccccCccccccceeeeccc---c-----ch-----
Confidence 665433 2 34443322 899999999999999999999975311 00111100 0 00
Q ss_pred CCCCCHHHHhccceEEEECCChh-HHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccccccccHHHHHHHHHHhhc
Q 010217 212 LPNLSDEERKRILHFVIVGGGPT-GVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSR 290 (515)
Q Consensus 212 ~~~~~~~~~~~~~~vvVvGgG~~-g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~ 290 (515)
...++++++|||||.. ++|+|..+.++ +.+|+++.+.+.+. +.+.+.|++
T Consensus 142 -------~~~~~~~~~VIggG~~~~~e~a~~~~~~--------------~~~v~i~~~~~~~~--------~~~~~~l~~ 192 (304)
T 4fk1_A 142 -------WELKDQPLIIISENEDHTLHMTKLVYNW--------------STDLVIATNGNELS--------QTIMDELSN 192 (304)
T ss_dssp -------GGGTTSCEEEECCSHHHHHHHHHHHTTT--------------CSCEEEECSSCCCC--------HHHHHHHHT
T ss_pred -------hHhcCCceeeecCCCchhhhHHHHHHhC--------------CceEEEEeccccch--------hhhhhhhhc
Confidence 0124568888888865 56777777664 67899998876543 234567888
Q ss_pred CCeEEEcCcEEEEEeCC--eEEEEecCCCceEEEecCeEEEccCCCCccchHHHHHHhCC--CCCCceeeCCCccccCCC
Q 010217 291 DGIDVKLGSMVVKVTDK--EIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ--TNRRALATDEWLRVEGSD 366 (515)
Q Consensus 291 ~gV~v~~~~~v~~i~~~--~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~~~--~~~g~i~vd~~l~t~~~~ 366 (515)
.|++++.++ +..+..+ .+..+.+.+|++ +++|.+++++|. .|+. .+++++++ +++|+|.||+++|| |+|
T Consensus 193 ~g~~~~~~~-v~~~~~~~~~~~~v~~~~g~~--i~~~~~vi~~g~--~~~~-~~~~~~g~~~~~~G~I~vd~~~~T-s~p 265 (304)
T 4fk1_A 193 KNIPVITES-IRTLQGEGGYLKKVEFHSGLR--IERAGGFIVPTF--FRPN-QFIEQLGCELQSNGTFVIDDFGRT-SEK 265 (304)
T ss_dssp TTCCEECSC-EEEEESGGGCCCEEEETTSCE--ECCCEEEECCEE--ECSS-CHHHHTTCCCCTTSSSCSSTTCBC-SST
T ss_pred cceeEeeee-EEEeecCCCeeeeeeccccce--eeecceeeeecc--ccCC-hhhhhcCeEECCCCCEEECcCCcc-CCC
Confidence 999999875 6666543 344445567875 889888887773 4444 45777877 67899999999998 999
Q ss_pred CEEEeccccccCccchHHHHHHHHHhhc
Q 010217 367 SIYALGDCATVNQRRVMEDIAAIFSKAD 394 (515)
Q Consensus 367 ~IyA~GD~~~~~~~~~~~~~~~~~~~a~ 394 (515)
||||+|||++.+..++..|+.++..+|.
T Consensus 266 ~IyA~GDv~~~~~~~~~~A~~~G~~AA~ 293 (304)
T 4fk1_A 266 NIYLAGETTTQGPSSLIIAASQGNKAAI 293 (304)
T ss_dssp TEEECSHHHHTSCCCHHHHHHHHHHHHH
T ss_pred CEEEEeccCCCcchHHHHHHHHHHHHHH
Confidence 9999999998777778888887766553
No 67
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=100.00 E-value=7.4e-33 Score=297.08 Aligned_cols=284 Identities=17% Similarity=0.215 Sum_probs=197.8
Q ss_pred CCCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCC-C-------CCccCCcc----chhc----------------cCcc
Q 010217 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR-N-------YFAFTPLL----PSVT----------------CGTV 107 (515)
Q Consensus 56 ~~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~-~-------~~~~~~~~----~~~~----------------~g~~ 107 (515)
...+||+||||||||++||.+|++.|++|+|||+. + .++++.+. |... .+..
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~g~~ 184 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFGWS 184 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhCCcc
Confidence 34689999999999999999999999999999973 2 13332111 1100 0100
Q ss_pred --------cccccccch-----------HHHHhhcCceEEEEEeEEEEEecCCCEEEEeeCCccCCCCCceEEeecCEEE
Q 010217 108 --------EARSIVEPV-----------RNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLV 168 (515)
Q Consensus 108 --------~~~~~~~~~-----------~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lv 168 (515)
+...+..++ ...+...+++ ++.+.+..++.. .+.+.+. +++..++.||+||
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~--~~~~~~~~~~~~--~v~v~~~------~g~~~~~~~d~lv 254 (598)
T 2x8g_A 185 LDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVT--YLNAKGRLISPH--EVQITDK------NQKVSTITGNKII 254 (598)
T ss_dssp CCGGGCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EECSEEEEEETT--EEEEECT------TCCEEEEEEEEEE
T ss_pred ccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcE--EEEEEEEEcCCC--EEEEEeC------CCCeEEEEeCEEE
Confidence 001111111 1224455655 567778788755 4555432 2223479999999
Q ss_pred EccCCCcCCCCCCCCCCccccccChhHHHHHHHHHHHHHHhcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHH
Q 010217 169 IAMGARANTFNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDE 248 (515)
Q Consensus 169 iAtG~~~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~ 248 (515)
||||++|+.|++||.++.+. +.+++ + .++ ..+++++|||||++|+|+|..|.++
T Consensus 255 iAtGs~p~~p~i~G~~~~~~---~~~~~----------~---~~~-------~~~~~vvViGgG~~g~E~A~~l~~~--- 308 (598)
T 2x8g_A 255 LATGERPKYPEIPGAVEYGI---TSDDL----------F---SLP-------YFPGKTLVIGASYVALECAGFLASL--- 308 (598)
T ss_dssp ECCCEEECCCSSTTHHHHCE---EHHHH----------T---TCS-------SCCCSEEEECCSHHHHHHHHHHHHT---
T ss_pred EeCCCCCCCCCCCCcccceE---cHHHH----------h---hCc-------cCCCEEEEECCCHHHHHHHHHHHHc---
Confidence 99999999999999654322 11111 1 111 1346999999999999999999986
Q ss_pred HHHhhCcccCCCcEEEEEeccccccccccHHHHHHHHHHhhcCCeEEEcCcEEEEEe--------C---CeEEEE-ecCC
Q 010217 249 DLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVT--------D---KEIFTK-VRGN 316 (515)
Q Consensus 249 ~~~~~~p~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~--------~---~~v~~~-~~~~ 316 (515)
+.+|+++++. .+++.+++++.+.+.+.+++.||++++++.+.++. + +.+.+. ...+
T Consensus 309 -----------g~~Vtlv~~~-~~l~~~d~~~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~ 376 (598)
T 2x8g_A 309 -----------GGDVTVMVRS-ILLRGFDQQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTD 376 (598)
T ss_dssp -----------TCCEEEEESS-CSSTTSCHHHHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETT
T ss_pred -----------CCEEEEEECC-cCcCcCCHHHHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCC
Confidence 5799999998 77888999999999999999999999999887773 2 334332 2246
Q ss_pred CceEEEecCeEEEccCCCCccchHHH-HHHhCC--CCCCceeeCCCccccCCCCEEEeccccccCccchHHHHHHHH
Q 010217 317 GETSSMPYGMVVWSTGIAPHAIIKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCATVNQRRVMEDIAAIF 390 (515)
Q Consensus 317 G~~~~i~~D~vi~a~G~~~~p~~~~l-~~~~~~--~~~g~i~vd~~l~t~~~~~IyA~GD~~~~~~~~~~~~~~~~~ 390 (515)
|++.++++|.||+|+| ..|++..+ ++.+++ +.+|+|.||+++|| +.|+|||+|||+.........++.++.
T Consensus 377 g~~~~~~~D~vi~a~G--~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t-s~~~VyA~GD~~~~~~~~~~~A~~~g~ 450 (598)
T 2x8g_A 377 GKKFEEEFETVIFAVG--REPQLSKVLCETVGVKLDKNGRVVCTDDEQT-TVSNVYAIGDINAGKPQLTPVAIQAGR 450 (598)
T ss_dssp SCEEEEEESEEEECSC--EEECGGGTBCGGGCCCBCTTSCBCCCTTSBC-SSTTEEECGGGBTTSCCCHHHHHHHHH
T ss_pred CcEEeccCCEEEEEeC--CccccCccCchhcCceECCCCcEEeCCCCcC-CCCCEEEEeeecCCCCccHHHHHHhHH
Confidence 7765567999999999 57888433 466776 57799999999998 999999999997543333434444443
No 68
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=100.00 E-value=4.2e-32 Score=285.75 Aligned_cols=277 Identities=18% Similarity=0.291 Sum_probs=201.8
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCc----cchhcc-CcccccccccchHHHHhhcCceEEEEE
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPL----LPSVTC-GTVEARSIVEPVRNIVRKKNVDICFWE 131 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~----~~~~~~-g~~~~~~~~~~~~~~~~~~~i~v~~~~ 131 (515)
..++|+||||||||++||.+|++.|++|+|||+. +++... +..+.. .......+...+...+.++++++ +..
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~--~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~v-~~~ 287 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGER--FGGQVLDTVDIENYISVPKTEGQKLAGALKAHVSDYDVDV-IDS 287 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS--TTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHHTSCEEE-ECS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEECC--CCCcccccccccccCCCCCCCHHHHHHHHHHHHHHcCCEE-EcC
Confidence 4679999999999999999999999999999864 343321 111110 01122345556677778888775 234
Q ss_pred eEEEEEecC-----CCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCCCCCCCCc----cccccChhHHHHHHHH
Q 010217 132 AECFKIDAE-----NKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEEN----CNFLKEVEDAQRIRRN 202 (515)
Q Consensus 132 ~~v~~id~~-----~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ipG~~~~----~~~~~~~~~a~~~~~~ 202 (515)
.+|..++++ ...|.+.++. .+.||+||+|||++|+.+++||..+. ++++...
T Consensus 288 ~~v~~i~~~~~~~~~~~V~~~~g~----------~~~~d~vVlAtG~~~~~~~ipG~~~~~~~~v~~~~~~--------- 348 (521)
T 1hyu_A 288 QSASKLVPAATEGGLHQIETASGA----------VLKARSIIIATGAKWRNMNVPGEDQYRTKGVTYCPHC--------- 348 (521)
T ss_dssp CCEEEEECCSSTTSCEEEEETTSC----------EEEEEEEEECCCEEECCCCCTTTTTTTTTTEECCTTC---------
T ss_pred CEEEEEEeccCCCceEEEEECCCC----------EEEcCEEEECCCCCcCCCCCCChhhhcCceEEEeecC---------
Confidence 589999764 2345544322 78999999999999998999997532 1111110
Q ss_pred HHHHHHhcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccccccccHHHHH
Q 010217 203 VIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITA 282 (515)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~~~~~~~~~ 282 (515)
+.....+++|+|||+|++|+|+|..|+.. +.+|+++++.+.++. + .
T Consensus 349 --------------~~~~~~~k~V~ViGgG~~g~E~A~~L~~~--------------g~~Vtlv~~~~~l~~--~----~ 394 (521)
T 1hyu_A 349 --------------DGPLFKGKRVAVIGGGNSGVEAAIDLAGI--------------VEHVTLLEFAPEMKA--D----Q 394 (521)
T ss_dssp --------------CGGGGBTSEEEEECCSHHHHHHHHHHHHH--------------BSEEEEECSSSSCCS--C----H
T ss_pred --------------chhhcCCCeEEEECCCHHHHHHHHHHHhh--------------CCEEEEEEeCcccCc--C----H
Confidence 01113678999999999999999999986 579999999887753 2 3
Q ss_pred HHHHHhhc-CCeEEEcCcEEEEEeCC--e---EEEEecCCCceEEEecCeEEEccCCCCccchHHHHHH-hCCCCCCcee
Q 010217 283 FAEEKFSR-DGIDVKLGSMVVKVTDK--E---IFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQ-VGQTNRRALA 355 (515)
Q Consensus 283 ~~~~~l~~-~gV~v~~~~~v~~i~~~--~---v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~-~~~~~~g~i~ 355 (515)
.+.+.+++ .||++++++.++++.++ . +.+.+..+|+..++++|.||+++| ..|++ .+++. +.++.+|+|.
T Consensus 395 ~l~~~l~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G--~~pn~-~~l~~~l~~~~~G~I~ 471 (521)
T 1hyu_A 395 VLQDKVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVALAGIFVQIG--LLPNT-HWLEGALERNRMGEII 471 (521)
T ss_dssp HHHHHHTTCTTEEEECSEEEEEEEECSSSEEEEEEEETTTCCEEEEECSEEEECCC--EEESC-GGGTTTSCBCTTSCBC
T ss_pred HHHHHHhcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEEEEcCEEEECcC--CCCCc-hHHhhhhccCCCCcEE
Confidence 34566776 69999999999999753 2 444443457766799999999999 57777 45443 2336789999
Q ss_pred eCCCccccCCCCEEEeccccccCccchHHHHHHHHHhh
Q 010217 356 TDEWLRVEGSDSIYALGDCATVNQRRVMEDIAAIFSKA 393 (515)
Q Consensus 356 vd~~l~t~~~~~IyA~GD~~~~~~~~~~~~~~~~~~~a 393 (515)
||++++| ++|+|||+|||+..+...+..++.++..++
T Consensus 472 Vd~~~~t-s~p~VfA~GD~~~~~~~~~~~A~~~g~~aa 508 (521)
T 1hyu_A 472 IDAKCET-SVKGVFAAGDCTTVPYKQIIIATGEGAKAS 508 (521)
T ss_dssp CCTTCBC-SSTTEEECSTTBCCSSCCHHHHHHHHHHHH
T ss_pred eCCCCCC-CCCCEEEeecccCCCcceeeehHHhHHHHH
Confidence 9999998 999999999999987667777777766555
No 69
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=100.00 E-value=1.5e-32 Score=286.82 Aligned_cols=272 Identities=18% Similarity=0.288 Sum_probs=195.3
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCC------CccCCccchhc---------------------cCcc--
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNY------FAFTPLLPSVT---------------------CGTV-- 107 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~------~~~~~~~~~~~---------------------~g~~-- 107 (515)
+.+||+|||||+||++||..|++.|++|+|||+++. ++++.....+. .+..
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~~~ 81 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGISTG 81 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEECS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCcccC
Confidence 358999999999999999999999999999999863 33321111000 0000
Q ss_pred ----cccc-----------cccchHHHHhhcCceEEEEEeEEEEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccC
Q 010217 108 ----EARS-----------IVEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMG 172 (515)
Q Consensus 108 ----~~~~-----------~~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG 172 (515)
+... +...+..++.+.+++ ++.+++..++.....|... +++...+.||+||||||
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~g~~~~~~~~~~~v~~~--------~g~~~~~~~d~lvlAtG 151 (476)
T 3lad_A 82 EVAIDVPTMIARKDQIVRNLTGGVASLIKANGVT--LFEGHGKLLAGKKVEVTAA--------DGSSQVLDTENVILASG 151 (476)
T ss_dssp CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCE--EEESEEEECSTTCEEEECT--------TSCEEEECCSCEEECCC
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEeEEEEecCCEEEEEcC--------CCceEEEEcCEEEEcCC
Confidence 0000 011122345566766 5677777777654444332 22235899999999999
Q ss_pred CCcCCCCCCCCC-CccccccChhHHHHHHHHHHHHHHhcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHH
Q 010217 173 ARANTFNTPGVE-ENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLF 251 (515)
Q Consensus 173 ~~~~~~~ipG~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~ 251 (515)
++|..|+.++.+ ..++. ..+. ..+. ..+++++|||+|++|+|+|..|.++
T Consensus 152 ~~p~~~~~~~~~~~~v~~---~~~~-------------~~~~-------~~~~~v~ViGgG~~g~e~A~~l~~~------ 202 (476)
T 3lad_A 152 SKPVEIPPAPVDQDVIVD---STGA-------------LDFQ-------NVPGKLGVIGAGVIGLELGSVWARL------ 202 (476)
T ss_dssp EEECCCTTSCCCSSSEEE---HHHH-------------TSCS-------SCCSEEEEECCSHHHHHHHHHHHHT------
T ss_pred CCCCCCCCCCCCcccEEe---chhh-------------hccc-------cCCCeEEEECCCHHHHHHHHHHHHc------
Confidence 999877665543 22221 1111 1111 2456999999999999999999886
Q ss_pred hhCcccCCCcEEEEEeccccccccccHHHHHHHHHHhhcCCeEEEcCcEEEEEeC--CeEEEEec-CCCceEEEecCeEE
Q 010217 252 KLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVR-GNGETSSMPYGMVV 328 (515)
Q Consensus 252 ~~~p~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~--~~v~~~~~-~~G~~~~i~~D~vi 328 (515)
+.+|+++++.+++++.+++++.+.+.+.+++.||+++++++|++++. +.+.+... .+| ..++++|.||
T Consensus 203 --------g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g-~~~~~~D~vi 273 (476)
T 3lad_A 203 --------GAEVTVLEAMDKFLPAVDEQVAKEAQKILTKQGLKILLGARVTGTEVKNKQVTVKFVDAEG-EKSQAFDKLI 273 (476)
T ss_dssp --------TCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTEEEEETCEEEEEEECSSCEEEEEESSSE-EEEEEESEEE
T ss_pred --------CCcEEEEecCCCcCcccCHHHHHHHHHHHHhCCCEEEECCEEEEEEEcCCEEEEEEEeCCC-cEEEECCEEE
Confidence 68999999999999999999999999999999999999999999974 33443322 223 2369999999
Q ss_pred EccCCCCccchHHH-HHHhCC--CCCCceeeCCCccccCCCCEEEeccccccCc
Q 010217 329 WSTGIAPHAIIKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCATVNQ 379 (515)
Q Consensus 329 ~a~G~~~~p~~~~l-~~~~~~--~~~g~i~vd~~l~t~~~~~IyA~GD~~~~~~ 379 (515)
+|+| ..|++..+ ++.+++ +.+|+|.||+++|| +.|+|||+|||+..+.
T Consensus 274 ~a~G--~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~~~ 324 (476)
T 3lad_A 274 VAVG--RRPVTTDLLAADSGVTLDERGFIYVDDYCAT-SVPGVYAIGDVVRGAM 324 (476)
T ss_dssp ECSC--EEECCTTCCSSCCSCCBCTTSCBCCCTTSBC-SSTTEEECGGGSSSCC
T ss_pred EeeC--CcccCCCCCccccCccccCCCCEeeCCCccc-CCCCEEEEEccCCCcc
Confidence 9999 57887544 566676 56889999999998 9999999999997544
No 70
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.9e-32 Score=273.01 Aligned_cols=281 Identities=17% Similarity=0.209 Sum_probs=195.2
Q ss_pred CCCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCcc-------chhccCcccccccccchHHHHhhcCceEE
Q 010217 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLL-------PSVTCGTVEARSIVEPVRNIVRKKNVDIC 128 (515)
Q Consensus 56 ~~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~~~~~i~v~ 128 (515)
.+.++|+|||||+||+++|..|++.|++|+|||+. ..++.... +.+. ......++..++.+.+.+.++++
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~v~~- 88 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGALMTTTDVENYPGFR-NGITGPELMDEMREQALRFGADL- 88 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCGGGSCSCBCCSTTCT-TCBCHHHHHHHHHHHHHHTTCEE-
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCceeccchhhhcCCCC-CCCCHHHHHHHHHHHHHHcCCEE-
Confidence 34689999999999999999999999999999975 33332111 1111 01122345556667777888775
Q ss_pred EEEeEEEEEecCC-CEE-EEeeCCccCCCCCceEEeecCEEEEccCCCcCCCCCCCCCCcc-ccccChhHHHHHHHHHHH
Q 010217 129 FWEAECFKIDAEN-KKV-YCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENC-NFLKEVEDAQRIRRNVIE 205 (515)
Q Consensus 129 ~~~~~v~~id~~~-~~v-~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ipG~~~~~-~~~~~~~~a~~~~~~~~~ 205 (515)
...++..++..+ ..| .+.++. .+.||+||+|||+.|..|++||..... ..+...... ...
T Consensus 89 -~~~~v~~i~~~~~~~v~~~~~g~----------~~~~d~lviAtG~~~~~~~i~g~~~~~~~~~~~~~~~---~~~--- 151 (335)
T 2a87_A 89 -RMEDVESVSLHGPLKSVVTADGQ----------THRARAVILAMGAAARYLQVPGEQELLGRGVSSCATC---DGF--- 151 (335)
T ss_dssp -ECCCEEEEECSSSSEEEEETTSC----------EEEEEEEEECCCEEECCCCCTHHHHTBTTTEESCHHH---HGG---
T ss_pred -EEeeEEEEEeCCcEEEEEeCCCC----------EEEeCEEEECCCCCccCCCCCchHhccCCceEEeecc---chh---
Confidence 344588888722 244 433222 789999999999999988899864210 011111110 000
Q ss_pred HHHhcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccccccccHHHHHHHH
Q 010217 206 SFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAE 285 (515)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~ 285 (515)
...+++|+|||+|++|+|+|..|.++ +.+|+++++.+.+... ..+ ..
T Consensus 152 --------------~~~~~~v~ViG~G~~g~e~a~~l~~~--------------g~~V~l~~~~~~~~~~--~~~---~~ 198 (335)
T 2a87_A 152 --------------FFRDQDIAVIGGGDSAMEEATFLTRF--------------ARSVTLVHRRDEFRAS--KIM---LD 198 (335)
T ss_dssp --------------GGTTCEEEEECSSHHHHHHHHHHTTT--------------CSEEEEECSSSSCSSC--TTH---HH
T ss_pred --------------hcCCCEEEEECCCHHHHHHHHHHHHh--------------CCeEEEEEcCCcCCcc--HHH---HH
Confidence 02467999999999999999999875 6899999998876432 111 12
Q ss_pred HHhhcCCeEEEcCcEEEEEeCCe----EEEEecCCCceEEEecCeEEEccCCCCccchHHHHH-HhCCCCCCceeeCCC-
Q 010217 286 EKFSRDGIDVKLGSMVVKVTDKE----IFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMK-QVGQTNRRALATDEW- 359 (515)
Q Consensus 286 ~~l~~~gV~v~~~~~v~~i~~~~----v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~-~~~~~~~g~i~vd~~- 359 (515)
+.+++.||++++++.+++++.++ +.+....+|+..+++||.||||+| ..|++ .+++ .+.++.+|+|.||++
T Consensus 199 ~~~~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G--~~p~~-~~~~~~l~~~~~G~i~vd~~~ 275 (335)
T 2a87_A 199 RARNNDKIRFLTNHTVVAVDGDTTVTGLRVRDTNTGAETTLPVTGVFVAIG--HEPRS-GLVREAIDVDPDGYVLVQGRT 275 (335)
T ss_dssp HHHHCTTEEEECSEEEEEEECSSSCCEEEEEEETTSCCEEECCSCEEECSC--EEECC-TTTBTTBCBCTTSCBCCSTTS
T ss_pred HHhccCCcEEEeCceeEEEecCCcEeEEEEEEcCCCceEEeecCEEEEccC--CccCh-hHhhcccccCCCccEEeCCCC
Confidence 44567899999999999998654 565543456545699999999999 46776 4444 233367899999997
Q ss_pred ccccCCCCEEEeccccccCccchHHHHHHHHHhh
Q 010217 360 LRVEGSDSIYALGDCATVNQRRVMEDIAAIFSKA 393 (515)
Q Consensus 360 l~t~~~~~IyA~GD~~~~~~~~~~~~~~~~~~~a 393 (515)
++| +.|+|||+|||+..+......++.++..+|
T Consensus 276 ~~t-~~~~iya~GD~~~~~~~~~~~A~~~g~~aA 308 (335)
T 2a87_A 276 TST-SLPGVFAAGDLVDRTYRQAVTAAGSGCAAA 308 (335)
T ss_dssp SBC-SSTTEEECGGGTCCSCCCHHHHHHHHHHHH
T ss_pred Ccc-CCCCEEEeeecCCccHHHHHHHHHhHHHHH
Confidence 566 999999999999976556666666655444
No 71
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=100.00 E-value=1.8e-32 Score=272.75 Aligned_cols=286 Identities=15% Similarity=0.173 Sum_probs=197.6
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcC----CCCCccCCccc----hhc--cCcccccccccchHHHHhhcCceE
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISP----RNYFAFTPLLP----SVT--CGTVEARSIVEPVRNIVRKKNVDI 127 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~----~~~~~~~~~~~----~~~--~g~~~~~~~~~~~~~~~~~~~i~v 127 (515)
.++|+|||||+||+++|..|++.|++|+|||+ ....++..... ..+ .......++...+...+.+.++++
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~ 87 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTDKFRKQSERFGTTI 87 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHHHHHHHHHHCCCEE
Confidence 47999999999999999999999999999998 33333321111 000 001122345555667777888775
Q ss_pred EEEEeEEEEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCCCCCCCCc--cccccChhHHHHHHHHHHH
Q 010217 128 CFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEEN--CNFLKEVEDAQRIRRNVIE 205 (515)
Q Consensus 128 ~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ipG~~~~--~~~~~~~~~a~~~~~~~~~ 205 (515)
...+|..++...+.+.+.. . + ..+.||+||+|||++|..|++||.... .+....+..........
T Consensus 88 --~~~~v~~i~~~~~~~~v~~-~-----~---~~~~~~~vv~A~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-- 154 (333)
T 1vdc_A 88 --FTETVTKVDFSSKPFKLFT-D-----S---KAILADAVILAIGAVAKRLSFVGSGEVLGGFWNRGISACAVCDGAA-- 154 (333)
T ss_dssp --ECCCCCEEECSSSSEEEEC-S-----S---EEEEEEEEEECCCEEECCCCCBTCSSSSSCCBTTTEESCHHHHTTS--
T ss_pred --EEeEEEEEEEcCCEEEEEE-C-----C---cEEEcCEEEECCCCCcCCCCCCCccccccccccCcEEEeccCccch--
Confidence 3445889988766444432 1 1 278999999999999999999987541 12111111111110000
Q ss_pred HHHhcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccccccccHHHHHHHH
Q 010217 206 SFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAE 285 (515)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~ 285 (515)
....+++|+|||+|++|+|+|..|.++ +.+|+++++.+.+.. .+.+ ..
T Consensus 155 -------------~~~~~~~v~VvG~G~~g~e~A~~l~~~--------------g~~V~lv~~~~~~~~--~~~~---~~ 202 (333)
T 1vdc_A 155 -------------PIFRNKPLAVIGGGDSAMEEANFLTKY--------------GSKVYIIHRRDAFRA--SKIM---QQ 202 (333)
T ss_dssp -------------GGGTTSEEEEECCSHHHHHHHHHHTTT--------------SSEEEEECSSSSCCS--CHHH---HH
T ss_pred -------------hhcCCCeEEEECCChHHHHHHHHHHhc--------------CCeEEEEecCCcCCc--cHHH---HH
Confidence 002567999999999999999999875 689999999887643 2222 22
Q ss_pred HHhhcCCeEEEcCcEEEEEeCCe-------EEEEecCCCceEEEecCeEEEccCCCCccchHHHHHHhCC--CCCCceee
Q 010217 286 EKFSRDGIDVKLGSMVVKVTDKE-------IFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ--TNRRALAT 356 (515)
Q Consensus 286 ~~l~~~gV~v~~~~~v~~i~~~~-------v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~~~--~~~g~i~v 356 (515)
+.+++.||++++++.+.++..++ +.+....+|+..+++||.||||+| ..|+. .+++ .++ +.+|+|.|
T Consensus 203 ~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G--~~p~~-~~~~-~~l~~~~~G~i~v 278 (333)
T 1vdc_A 203 RALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIG--HEPAT-KFLD-GGVELDSDGYVVT 278 (333)
T ss_dssp HHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSC--EEESC-GGGT-TSSCBCTTSCBCC
T ss_pred HHHhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeC--Cccch-HHhh-ccccccCCCCEEe
Confidence 45678999999999999997542 555443357655799999999999 47776 4544 344 66899999
Q ss_pred CCC-ccccCCCCEEEeccccccCccchHHHHHHHHHhh
Q 010217 357 DEW-LRVEGSDSIYALGDCATVNQRRVMEDIAAIFSKA 393 (515)
Q Consensus 357 d~~-l~t~~~~~IyA~GD~~~~~~~~~~~~~~~~~~~a 393 (515)
|++ ++| +.|+|||+|||+..+......++.++..++
T Consensus 279 d~~~~~t-~~~~vya~GD~~~~~~~~~~~A~~~g~~aa 315 (333)
T 1vdc_A 279 KPGTTQT-SVPGVFAAGDVQDKKYRQAITAAGTGCMAA 315 (333)
T ss_dssp CTTSCBC-SSTTEEECGGGGCSSCCCHHHHHHHHHHHH
T ss_pred chhhccc-CCCCEEEeeeccCCCchhHHHHHHhHHHHH
Confidence 997 466 999999999999976566666666665544
No 72
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=100.00 E-value=1.1e-32 Score=288.44 Aligned_cols=266 Identities=17% Similarity=0.247 Sum_probs=193.4
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhc--------------------cCc------ccccc
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVT--------------------CGT------VEARS 111 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~--------------------~g~------~~~~~ 111 (515)
.+||+||||||||++||..|++.|++|+|||++. +|++++...+. .|. .+...
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~-~GGtc~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~ 86 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA-YGTTCARVGCMPSKLLIAAADASYHASQTDLFGIQVDRISVNGKA 86 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC-SSCHHHHHSHHHHHHHHHHHHHHHHHTCGGGGTEECSEEEECHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC-CCCcccccChhcCHHHHHHHHHHHHHhhhhhcCcCCCCCccCHHH
Confidence 4799999999999999999999999999999975 66543211000 010 11111
Q ss_pred cccchHHH-----------Hhhc-CceEEEEEeEEEEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCC
Q 010217 112 IVEPVRNI-----------VRKK-NVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFN 179 (515)
Q Consensus 112 ~~~~~~~~-----------~~~~-~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ 179 (515)
+..++... +... +++ ++.+++..++ .+.|.+.++ ..+.||+||||||++|..|+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~g~a~~~~--~~~v~~~~~----------~~~~~d~lViATGs~p~~p~ 152 (492)
T 3ic9_A 87 VMKRIQTERDRFVGFVVESVESFDEQD--KIRGFAKFLD--EHTLQVDDH----------SQVIAKRIVIATGSRPNYPE 152 (492)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCGGG--EEESCEEEEE--TTEEEETTT----------EEEEEEEEEECCCEECCCCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCee--EEEEEEEEec--CCEEEEcCC----------cEEEeCEEEEccCCCCcCCC
Confidence 11221111 1121 233 4566666665 346776432 28999999999999999887
Q ss_pred CCCCC-CccccccChhHHHHHHHHHHHHHHhcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccC
Q 010217 180 TPGVE-ENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVK 258 (515)
Q Consensus 180 ipG~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~ 258 (515)
++|.. +.++ +.++. + .+. ..+++++|||+|++|+|+|..|.++
T Consensus 153 ~~~~~~~~v~---t~~~~----------~---~~~-------~~~k~vvViGgG~ig~E~A~~l~~~------------- 196 (492)
T 3ic9_A 153 FLAAAGSRLL---TNDNL----------F---ELN-------DLPKSVAVFGPGVIGLELGQALSRL------------- 196 (492)
T ss_dssp HHHTTGGGEE---CHHHH----------T---TCS-------SCCSEEEEESSCHHHHHHHHHHHHT-------------
T ss_pred CCCccCCcEE---cHHHH----------h---hhh-------hcCCeEEEECCCHHHHHHHHHHHHc-------------
Confidence 66533 2222 22111 1 111 1356999999999999999999986
Q ss_pred CCcEEEEEeccccccccccHHHHHHHHHHhhcCCeEEEcCcEEEEEeC--CeEEEEec-CCCceEEEecCeEEEccCCCC
Q 010217 259 DSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVR-GNGETSSMPYGMVVWSTGIAP 335 (515)
Q Consensus 259 ~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~--~~v~~~~~-~~G~~~~i~~D~vi~a~G~~~ 335 (515)
+.+|+++++.+++++.+++++.+.+.+.|++. |++++++.+++++. +++.+... .+|+..++++|.||+|+| .
T Consensus 197 -g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G--~ 272 (492)
T 3ic9_A 197 -GVIVKVFGRSGSVANLQDEEMKRYAEKTFNEE-FYFDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATG--R 272 (492)
T ss_dssp -TCEEEEECCTTCCTTCCCHHHHHHHHHHHHTT-SEEETTCEEEEEEECSSSEEEEEECTTCCEEEEEESEEEECSC--C
T ss_pred -CCeEEEEEECCcccccCCHHHHHHHHHHHhhC-cEEEECCEEEEEEEcCCEEEEEEEeCCCceEEEECCEEEEeeC--C
Confidence 68999999999999999999999999999988 99999999999974 34554432 367545699999999999 5
Q ss_pred ccchHHH-HHHhCC--CCCCceeeC-CCccccCCCCEEEeccccccCc
Q 010217 336 HAIIKDF-MKQVGQ--TNRRALATD-EWLRVEGSDSIYALGDCATVNQ 379 (515)
Q Consensus 336 ~p~~~~l-~~~~~~--~~~g~i~vd-~~l~t~~~~~IyA~GD~~~~~~ 379 (515)
.|++..+ ++.+++ +.+|+|.|| +++|| +.|+|||+|||+..+.
T Consensus 273 ~p~~~~l~l~~~gl~~~~~G~i~vd~~~~~t-~~~~IyA~GD~~~~~~ 319 (492)
T 3ic9_A 273 KANVDKLGLENTSIELDKKNSPLFDELTLQT-SVDHIFVAGDANNTLT 319 (492)
T ss_dssp EESCSSSCGGGSCCCBCTTCCBCCCTTTCBC-SSTTEEECGGGGTSSC
T ss_pred ccCCCCCChhhcCCEECCCCCEeECcccccC-CCCCEEEEEecCCCCc
Confidence 7887433 677777 678999999 99998 9999999999998653
No 73
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=100.00 E-value=3.5e-33 Score=289.97 Aligned_cols=265 Identities=22% Similarity=0.340 Sum_probs=196.1
Q ss_pred CeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhc-------------------cCc------ccccccc
Q 010217 59 KKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVT-------------------CGT------VEARSIV 113 (515)
Q Consensus 59 ~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~-------------------~g~------~~~~~~~ 113 (515)
+||+|||||+||++||..|++.|++|+|||+++.+++++....+. .+. .+...+.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 81 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKKGLLGAKVKGVELDLPALM 81 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHCCTTEEECCEEECHHHHH
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhhhcCCcccCCCccCHHHHH
Confidence 689999999999999999999999999999997777653211100 010 0001111
Q ss_pred -----------cchHHHHhhcCceEEEEEeEEEEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCCCCC
Q 010217 114 -----------EPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPG 182 (515)
Q Consensus 114 -----------~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ipG 182 (515)
..+..++++.++++ ..+++..++. +.+.+.. . + .++.||+||||||++|..|+++|
T Consensus 82 ~~~~~~~~~l~~~~~~~~~~~~v~~--~~g~~~~i~~--~~~~v~~-~-----g---~~~~~d~lviAtG~~p~~~~~~g 148 (455)
T 2yqu_A 82 AHKDKVVQANTQGVEFLFKKNGIAR--HQGTARFLSE--RKVLVEE-T-----G---EELEARYILIATGSAPLIPPWAQ 148 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCEE--EESCEEESSS--SEEEETT-T-----C---CEEEEEEEEECCCEEECCCTTBC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCEE--EEeEEEEecC--CeEEEee-C-----C---EEEEecEEEECCCCCCCCCCCCC
Confidence 11234556677764 4555655553 4565542 1 1 27999999999999999998888
Q ss_pred CCC-ccccccChhHHHHHHHHHHHHHHhcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCc
Q 010217 183 VEE-NCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSV 261 (515)
Q Consensus 183 ~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~ 261 (515)
.+. .++ +..++. .+. ..+++++|||+|++|+|+|..|.++ +.
T Consensus 149 ~~~~~v~---~~~~~~-------------~~~-------~~~~~vvIiGgG~~g~e~A~~l~~~--------------g~ 191 (455)
T 2yqu_A 149 VDYERVV---TSTEAL-------------SFP-------EVPKRLIVVGGGVIGLELGVVWHRL--------------GA 191 (455)
T ss_dssp CCSSSEE---CHHHHT-------------CCS-------SCCSEEEEECCSHHHHHHHHHHHHT--------------TC
T ss_pred CCcCcEe---chHHhh-------------ccc-------cCCCeEEEECCCHHHHHHHHHHHHc--------------CC
Confidence 653 222 222211 111 1346999999999999999999885 68
Q ss_pred EEEEEeccccccccccHHHHHHHHHHhhcCCeEEEcCcEEEEEeC--CeEEEEecCCCceEEEecCeEEEccCCCCccch
Q 010217 262 KITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGIAPHAII 339 (515)
Q Consensus 262 ~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~--~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~ 339 (515)
+|+++++.+++++.+++++.+.+.+.+++.||+++++++|++++. +.+.+.. .+|+. +++|.||+|+| ..|++
T Consensus 192 ~V~lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~-~~g~~--i~~D~vv~A~G--~~p~~ 266 (455)
T 2yqu_A 192 EVIVLEYMDRILPTMDLEVSRAAERVFKKQGLTIRTGVRVTAVVPEAKGARVEL-EGGEV--LEADRVLVAVG--RRPYT 266 (455)
T ss_dssp EEEEECSSSSSCTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEE-TTSCE--EEESEEEECSC--EEECC
T ss_pred EEEEEecCCccccccCHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEE-CCCeE--EEcCEEEECcC--CCcCC
Confidence 999999999999999999999999999999999999999999974 3455443 45664 99999999999 57776
Q ss_pred HHH-HHHhCC--CCCCceeeCCCccccCCCCEEEeccccccCc
Q 010217 340 KDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCATVNQ 379 (515)
Q Consensus 340 ~~l-~~~~~~--~~~g~i~vd~~l~t~~~~~IyA~GD~~~~~~ 379 (515)
..+ ++.+++ +.+|+|.||++++| +.|+|||+|||+..+.
T Consensus 267 ~~l~~~~~g~~~~~~g~i~vd~~~~t-~~~~iya~GD~~~~~~ 308 (455)
T 2yqu_A 267 EGLSLENAGLSTDERGRIPVDEHLRT-RVPHIYAIGDVVRGPM 308 (455)
T ss_dssp TTCCGGGGTCCCCTTSCCCCCTTSBC-SSTTEEECGGGSSSCC
T ss_pred CCCChhhcCCccCCCCcEeECCCccc-CCCCEEEEecCCCCcc
Confidence 333 566776 45688999999998 8999999999998653
No 74
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=100.00 E-value=1.9e-32 Score=286.52 Aligned_cols=262 Identities=23% Similarity=0.308 Sum_probs=196.6
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhc--------------------cCc------cccc-
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVT--------------------CGT------VEAR- 110 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~--------------------~g~------~~~~- 110 (515)
.+||+|||||+||++||..|++.|++|+|||+ +.+|+......+. .+. .+..
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~ 104 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGALGKRVAIAEE-YRIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADPIFNWEK 104 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCCCEECHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHhCcCEEEEEeC-CCCCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccCCCccCHHH
Confidence 57999999999999999999999999999999 5556543211100 000 0000
Q ss_pred ----------ccccchHHHHhhcCceEEEEEeEEEEEecCCCEEEEe-eCCccCCCCCceEEeecCEEEEccCCCcC-CC
Q 010217 111 ----------SIVEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCR-SSQNTNLNGKEEFCMDYDYLVIAMGARAN-TF 178 (515)
Q Consensus 111 ----------~~~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~-~~~~~~~~~~~~~~~~~d~lviAtG~~~~-~~ 178 (515)
.+...+...+.+.+++ ++.+++..++. +.+.+. ++. .+.||+||||||+.|. .|
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~g~~~~i~~--~~v~v~~~~~----------~~~~d~lviAtG~~p~~~p 170 (484)
T 3o0h_A 105 LVAAKNKEISRLEGLYREGLQNSNVH--IYESRAVFVDE--HTLELSVTGE----------RISAEKILIATGAKIVSNS 170 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCE--EEESCEEEEET--TEEEETTTCC----------EEEEEEEEECCCEEECCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCE--EEEeEEEEeeC--CEEEEecCCe----------EEEeCEEEEccCCCcccCC
Confidence 1112234455667766 56778888874 466664 221 7999999999999999 88
Q ss_pred CCCCCCCccccccChhHHHHHHHHHHHHHHhcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccC
Q 010217 179 NTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVK 258 (515)
Q Consensus 179 ~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~ 258 (515)
++||.+ .++..... . . +. ..+++++|||+|++|+|+|..+.++
T Consensus 171 ~i~G~~-~~~~~~~~---~----------~---~~-------~~~~~v~ViGgG~~g~e~A~~l~~~------------- 213 (484)
T 3o0h_A 171 AIKGSD-LCLTSNEI---F----------D---LE-------KLPKSIVIVGGGYIGVEFANIFHGL------------- 213 (484)
T ss_dssp -CBTGG-GSBCTTTG---G----------G---CS-------SCCSEEEEECCSHHHHHHHHHHHHT-------------
T ss_pred CCCCcc-ccccHHHH---H----------h---HH-------hcCCcEEEECcCHHHHHHHHHHHHc-------------
Confidence 999974 22221111 0 0 11 1356999999999999999999886
Q ss_pred CCcEEEEEeccccccccccHHHHHHHHHHhhcCCeEEEcCcEEEEEeCC--eEEEEecCCCceEEEecCeEEEccCCCCc
Q 010217 259 DSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTDK--EIFTKVRGNGETSSMPYGMVVWSTGIAPH 336 (515)
Q Consensus 259 ~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~--~v~~~~~~~G~~~~i~~D~vi~a~G~~~~ 336 (515)
+.+|+++++.+++++.+++++.+.+.+.+++.||++++++.|++++.+ ++.+. +.+|+. +++|.||+|+| ..
T Consensus 214 -g~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~-~~~g~~--i~aD~Vi~A~G--~~ 287 (484)
T 3o0h_A 214 -GVKTTLLHRGDLILRNFDYDLRQLLNDAMVAKGISIIYEATVSQVQSTENCYNVV-LTNGQT--ICADRVMLATG--RV 287 (484)
T ss_dssp -TCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEE-ETTSCE--EEESEEEECCC--EE
T ss_pred -CCeEEEEECCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEeeCCEEEEE-ECCCcE--EEcCEEEEeeC--CC
Confidence 689999999999999999999999999999999999999999999753 45444 356764 99999999999 57
Q ss_pred cchHHH-HHHhCC--CCCCceeeCCCccccCCCCEEEeccccccC
Q 010217 337 AIIKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCATVN 378 (515)
Q Consensus 337 p~~~~l-~~~~~~--~~~g~i~vd~~l~t~~~~~IyA~GD~~~~~ 378 (515)
|++..+ ++.+++ +.+|+|.||+++|| +.|+|||+|||+..+
T Consensus 288 p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~~ 331 (484)
T 3o0h_A 288 PNTTGLGLERAGVKVNEFGAVVVDEKMTT-NVSHIWAVGDVTGHI 331 (484)
T ss_dssp ECCTTCCHHHHTCCBCTTSCBCCCTTSBC-SSTTEEECGGGGTSC
T ss_pred cCCCCCChhhcCceECCCCCEeECCCCCC-CCCCEEEEEecCCCC
Confidence 877443 677777 67799999999998 999999999999854
No 75
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.98 E-value=2.8e-32 Score=281.51 Aligned_cols=290 Identities=16% Similarity=0.133 Sum_probs=195.7
Q ss_pred CCCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEE
Q 010217 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECF 135 (515)
Q Consensus 56 ~~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~ 135 (515)
...++|+||||||||++||..|++.|++|+|||+.+.+++.. .+..+....++++.....+++.+.|+++++ +..+
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l--~~gip~~~~~~~~~~~~~~~l~~~gv~~~~-~~~v- 195 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLL--VYGIPGFKLEKSVVERRVKLLADAGVIYHP-NFEV- 195 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHH--HHTSCTTTSCHHHHHHHHHHHHHTTCEEET-TCCB-
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCee--eecCCCccCCHHHHHHHHHHHHHCCcEEEe-CCEe-
Confidence 457899999999999999999999999999999998876532 111222222345666667788888877532 2222
Q ss_pred EEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCC-cCCCCCCCCC-CccccccChhHHHHHHHHHHH-HHHhcCC
Q 010217 136 KIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGAR-ANTFNTPGVE-ENCNFLKEVEDAQRIRRNVIE-SFEKASL 212 (515)
Q Consensus 136 ~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~-~~~~~ipG~~-~~~~~~~~~~~a~~~~~~~~~-~~~~~~~ 212 (515)
.+.+++.+ ..+.||+||||||+. |+.+++||.+ .+++. +..+...... .+.. ..
T Consensus 196 -----~~~v~~~~-----------~~~~~d~vvlAtG~~~~~~~~ipG~~~~gv~~------a~~~l~~~~~~~~~~-~~ 252 (456)
T 2vdc_G 196 -----GRDASLPE-----------LRRKHVAVLVATGVYKARDIKAPGSGLGNIVA------ALDYLTTSNKVSLGD-TV 252 (456)
T ss_dssp -----TTTBCHHH-----------HHSSCSEEEECCCCCEECCTTCSCCTTTTEEE------HHHHHHHHHHHHCTT-TC
T ss_pred -----ccEEEhhH-----------hHhhCCEEEEecCCCCCCCCCCCCCcCCCcEE------HHHHHHHhhhhhccc-cc
Confidence 11222221 136799999999996 6788999975 23322 2222111111 0110 00
Q ss_pred CCCCH-HHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccc-cccccHHHHHHHHHHhhc
Q 010217 213 PNLSD-EERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHI-LNMFDKRITAFAEEKFSR 290 (515)
Q Consensus 213 ~~~~~-~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~-l~~~~~~~~~~~~~~l~~ 290 (515)
+...+ .....+++|+|||||++|+|+|..+.+++ ..+|+++++++.. ++..+.++ +.+++
T Consensus 253 ~~~~~g~~~~~gk~VvVIGgG~~a~d~A~~~~r~G-------------a~~Vtiv~r~~~~~~p~~~~e~-----~~~~~ 314 (456)
T 2vdc_G 253 EAYENGSLNAAGKHVVVLGGGDTAMDCVRTAIRQG-------------ATSVKCLYRRDRKNMPGSQREV-----AHAEE 314 (456)
T ss_dssp SSCCTTCSCCCCSEEEEECSSHHHHHHHHHHHHTT-------------CSEEEEECSSCSTTCSSCHHHH-----HHHHH
T ss_pred ccccccccccCCCEEEEECCChhHHHHHHHHHHcC-------------CCEEEEEEeCCccCCCCCHHHH-----HHHHH
Confidence 00000 00135789999999999999999998763 2369999998876 66655442 45777
Q ss_pred CCeEEEcCcEEEEEeCCe----EEEEec------C---------CCceEEEecCeEEEccCCCCccchHH-HHHHhCC--
Q 010217 291 DGIDVKLGSMVVKVTDKE----IFTKVR------G---------NGETSSMPYGMVVWSTGIAPHAIIKD-FMKQVGQ-- 348 (515)
Q Consensus 291 ~gV~v~~~~~v~~i~~~~----v~~~~~------~---------~G~~~~i~~D~vi~a~G~~~~p~~~~-l~~~~~~-- 348 (515)
.||++++++.++++.+++ +.+... . +|+..++++|.||+|+|+ .|+... +++.+++
T Consensus 315 ~Gv~~~~~~~~~~i~~~g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~--~p~~~~~~l~~~gl~~ 392 (456)
T 2vdc_G 315 EGVEFIWQAAPEGFTGDTVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGF--EPEDLPNAFDEPELKV 392 (456)
T ss_dssp TTCEEECCSSSCCEEEEEEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCE--ECCCHHHHHHSTTSCB
T ss_pred CCCEEEeCCCceEEeCCCcEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCC--CCCcchhhcccCCeeE
Confidence 899999999888886432 232210 1 355557999999999994 676533 6777776
Q ss_pred CCCCceeeCCC-ccccCCCCEEEeccccccCccchHHHHHHHHHhhc
Q 010217 349 TNRRALATDEW-LRVEGSDSIYALGDCATVNQRRVMEDIAAIFSKAD 394 (515)
Q Consensus 349 ~~~g~i~vd~~-l~t~~~~~IyA~GD~~~~~~~~~~~~~~~~~~~a~ 394 (515)
+.+|+|.||++ ++| +.|+|||+|||+..+ ..+..++.++..+|.
T Consensus 393 ~~~G~i~vd~~~~~T-s~~~VfA~GD~~~g~-~~v~~A~~~G~~aA~ 437 (456)
T 2vdc_G 393 TRWGTLLVDHRTKMT-NMDGVFAAGDIVRGA-SLVVWAIRDGRDAAE 437 (456)
T ss_dssp CTTSSBCCCTTTCBC-SSTTEEECGGGGSSC-CSHHHHHHHHHHHHH
T ss_pred CCCCCEEECCCCCcC-CCCCEEEeccccCCc-hHHHHHHHHHHHHHH
Confidence 67899999998 997 999999999999865 346667777665543
No 76
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.97 E-value=1.6e-30 Score=262.49 Aligned_cols=268 Identities=16% Similarity=0.216 Sum_probs=182.4
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCC-eEEEEcCCCCCccC------------CccchhccCc------------------
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSY-DVQVISPRNYFAFT------------PLLPSVTCGT------------------ 106 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~-~V~vie~~~~~~~~------------~~~~~~~~g~------------------ 106 (515)
.++|+|||||+||+++|..|++.|+ +|+|||+++ +++. +.......+.
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 82 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFNE 82 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHCC
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCccccCcccccccCcchhcccCCchhhhhccccccccccccc
Confidence 4799999999999999999999999 999999986 3321 1000000010
Q ss_pred --ccccccccchHHHHhhcCceEEEEEeEEEEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCCCCCCC
Q 010217 107 --VEARSIVEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVE 184 (515)
Q Consensus 107 --~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ipG~~ 184 (515)
.....+...+..++++.++++. .+.+|+.++.+++.+.+... ++ ++.||+||+|||+.+. |.+|+
T Consensus 83 ~~~~~~~~~~~l~~~~~~~gv~i~-~~~~v~~i~~~~~~~~v~~~------~g---~~~~d~vVlAtG~~~~-p~ip~-- 149 (369)
T 3d1c_A 83 EHISGETYAEYLQVVANHYELNIF-ENTVVTNISADDAYYTIATT------TE---TYHADYIFVATGDYNF-PKKPF-- 149 (369)
T ss_dssp SSCBHHHHHHHHHHHHHHTTCEEE-CSCCEEEEEECSSSEEEEES------SC---CEEEEEEEECCCSTTS-BCCCS--
T ss_pred cCCCHHHHHHHHHHHHHHcCCeEE-eCCEEEEEEECCCeEEEEeC------CC---EEEeCEEEECCCCCCc-cCCCC--
Confidence 0112233345566677888763 46679889876543444332 11 5889999999999865 55676
Q ss_pred CccccccChhHHHHHHHHHHHHHHhcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEE
Q 010217 185 ENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKIT 264 (515)
Q Consensus 185 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vt 264 (515)
........+.+ ....++++|+|||+|++|+|+|..|.++ +.+|+
T Consensus 150 ~~~~~~~~~~~----------------------~~~~~~~~vvVvG~G~~g~e~a~~l~~~--------------g~~V~ 193 (369)
T 3d1c_A 150 KYGIHYSEIED----------------------FDNFNKGQYVVIGGNESGFDAAYQLAKN--------------GSDIA 193 (369)
T ss_dssp SSCEEGGGCSC----------------------GGGSCSSEEEEECCSHHHHHHHHHHHHT--------------TCEEE
T ss_pred CceechhhcCC----------------------hhhcCCCEEEEECCCcCHHHHHHHHHhc--------------CCeEE
Confidence 22222111100 0112457999999999999999999885 57999
Q ss_pred EEeccccccc-------cccHHHHHHHHHHhhcCC-eEEEcCcEEEEEe--CCeEEEEecCCCceEEEecCeEEEccCCC
Q 010217 265 LLEAADHILN-------MFDKRITAFAEEKFSRDG-IDVKLGSMVVKVT--DKEIFTKVRGNGETSSMPYGMVVWSTGIA 334 (515)
Q Consensus 265 lv~~~~~~l~-------~~~~~~~~~~~~~l~~~g-V~v~~~~~v~~i~--~~~v~~~~~~~G~~~~i~~D~vi~a~G~~ 334 (515)
++++.+.+++ .+++...+.+.+.+++.| |++++++.|.+++ ++.+.+. +.+|+. ...+|.||||+|+
T Consensus 194 lv~~~~~~~~~~~d~~~~~~~~~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~~~~~v~-~~~g~~-~~~~d~vi~a~G~- 270 (369)
T 3d1c_A 194 LYTSTTGLNDPDADPSVRLSPYTRQRLGNVIKQGARIEMNVHYTVKDIDFNNGQYHIS-FDSGQS-VHTPHEPILATGF- 270 (369)
T ss_dssp EECC----------CTTSCCHHHHHHHHHHHHTTCCEEEECSCCEEEEEEETTEEEEE-ESSSCC-EEESSCCEECCCB-
T ss_pred EEecCCCCCCCCCCCCccCCHHHHHHHHHHHhhCCcEEEecCcEEEEEEecCCceEEE-ecCCeE-eccCCceEEeecc-
Confidence 9999988764 256777888999999997 9999999999994 4544443 356764 2346999999994
Q ss_pred CccchHHHHHHhCC-CCCCceeeCCCccccCCCCEEEeccccccCcc
Q 010217 335 PHAIIKDFMKQVGQ-TNRRALATDEWLRVEGSDSIYALGDCATVNQR 380 (515)
Q Consensus 335 ~~p~~~~l~~~~~~-~~~g~i~vd~~l~t~~~~~IyA~GD~~~~~~~ 380 (515)
.|+.. ++.+.++ +.+|+|.||++++.+++|+|||+|||+..+..
T Consensus 271 -~~~~~-~~~~~~~~~~~g~i~v~~~~~~t~~~~v~a~GD~~~~~~~ 315 (369)
T 3d1c_A 271 -DATKN-PIVQQLFVTTNQDIKLTTHDESTRYPNIFMIGATVENDNA 315 (369)
T ss_dssp -CGGGS-HHHHHHSCCTTSCCCBCTTSBBSSSTTEEECSTTCCCSSC
T ss_pred -CCccc-hhhhhhccCCCCCEEechhhcccCCCCeEEeccccccCCe
Confidence 67663 3333334 67788999987554599999999999986543
No 77
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.97 E-value=3.7e-31 Score=265.36 Aligned_cols=279 Identities=15% Similarity=0.182 Sum_probs=189.8
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCcc---------c---hhccCc---------ccccccccch
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLL---------P---SVTCGT---------VEARSIVEPV 116 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~---------~---~~~~g~---------~~~~~~~~~~ 116 (515)
+++|+|||||+||+++|..|++.|++|+|||+++.+++.... + ....+. .....+...+
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 82 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAYL 82 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHHH
Confidence 479999999999999999999999999999999876543110 0 000110 0113445556
Q ss_pred HHHHhhcCceEEEEEeEEEEEecCCCEEE-EeeCCccCCCCCceEEeecCEEEEccCC--CcCCCCCCCCCCc---cccc
Q 010217 117 RNIVRKKNVDICFWEAECFKIDAENKKVY-CRSSQNTNLNGKEEFCMDYDYLVIAMGA--RANTFNTPGVEEN---CNFL 190 (515)
Q Consensus 117 ~~~~~~~~i~v~~~~~~v~~id~~~~~v~-~~~~~~~~~~~~~~~~~~~d~lviAtG~--~~~~~~ipG~~~~---~~~~ 190 (515)
..++++.+++++ .+++|+.++..++.+. +... ++ ++.||+||+|||+ .|+.|++||.... ....
T Consensus 83 ~~~~~~~~~~~~-~~~~v~~i~~~~~~~~~v~~~------~g---~~~~d~vV~AtG~~~~~~~~~~~g~~~~~~~~~~~ 152 (357)
T 4a9w_A 83 AQYEQKYALPVL-RPIRVQRVSHFGERLRVVARD------GR---QWLARAVISATGTWGEAYTPEYQGLESFAGIQLHS 152 (357)
T ss_dssp HHHHHHTTCCEE-CSCCEEEEEEETTEEEEEETT------SC---EEEEEEEEECCCSGGGBCCCCCTTGGGCCSEEEEG
T ss_pred HHHHHHcCCEEE-cCCEEEEEEECCCcEEEEEeC------CC---EEEeCEEEECCCCCCCCCCCCCCCccccCCcEEEe
Confidence 677778888863 5778999998888766 5542 22 7999999999995 6677889987532 1111
Q ss_pred cChhHHHHHHHHHHHHHHhcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEecc-
Q 010217 191 KEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAA- 269 (515)
Q Consensus 191 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~- 269 (515)
..+. +.....+++|+|||+|++|+|+|..|.+. + +|+++++.
T Consensus 153 ~~~~----------------------~~~~~~~~~v~VvG~G~~g~e~a~~l~~~--------------~-~v~~v~~~~ 195 (357)
T 4a9w_A 153 AHYS----------------------TPAPFAGMRVAIIGGGNSGAQILAEVSTV--------------A-ETTWITQHE 195 (357)
T ss_dssp GGCC----------------------CSGGGTTSEEEEECCSHHHHHHHHHHTTT--------------S-EEEEECSSC
T ss_pred ccCC----------------------ChhhcCCCEEEEECCCcCHHHHHHHHHhh--------------C-CEEEEECCC
Confidence 1110 01113567999999999999999999875 3 69999988
Q ss_pred ccccccc--cHHHHHHHHHHhh----------------------------cCCeEEEcCcEEEEEeCCeEEEEecCCCce
Q 010217 270 DHILNMF--DKRITAFAEEKFS----------------------------RDGIDVKLGSMVVKVTDKEIFTKVRGNGET 319 (515)
Q Consensus 270 ~~~l~~~--~~~~~~~~~~~l~----------------------------~~gV~v~~~~~v~~i~~~~v~~~~~~~G~~ 319 (515)
+.+++.. ...+.+.+.+.+. +.|+ +..+..+.+++.+++. +.+|++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-i~~~~~v~~~~~~~v~---~~~g~~ 271 (357)
T 4a9w_A 196 PAFLADDVDGRVLFERATERWKAQQEGREPDLPPGGFGDIVMVPPVLDARARGV-LAAVPPPARFSPTGMQ---WADGTE 271 (357)
T ss_dssp CCBCCTTCCTHHHHTC----------------------CBCCCHHHHHHHHTTC-CCEECCCSEEETTEEE---CTTSCE
T ss_pred CeecchhhcCccHHHHHHHHHhccccccCCCcccccccCcccChhHHHHHhcCc-eEEecCcceEeCCeeE---ECCCCE
Confidence 4555532 2333333333222 3444 5556667777776644 346764
Q ss_pred EEEecCeEEEccCCCCccchHHHHHHhCC-CCCCceeeCCC--ccccCCCCEEEec--cccccCccchHHHHHHHHHhh
Q 010217 320 SSMPYGMVVWSTGIAPHAIIKDFMKQVGQ-TNRRALATDEW--LRVEGSDSIYALG--DCATVNQRRVMEDIAAIFSKA 393 (515)
Q Consensus 320 ~~i~~D~vi~a~G~~~~p~~~~l~~~~~~-~~~g~i~vd~~--l~t~~~~~IyA~G--D~~~~~~~~~~~~~~~~~~~a 393 (515)
++||.||||+|+ .|++ .+++.+++ +.+|+|.||++ ++| +.|+|||+| ||+......+..++.++..++
T Consensus 272 --i~~D~vi~a~G~--~p~~-~~l~~~gl~~~~G~i~vd~~~l~~t-~~~~vya~Gd~d~~~~~~~~~~~A~~~g~~~a 344 (357)
T 4a9w_A 272 --RAFDAVIWCTGF--RPAL-SHLKGLDLVTPQGQVEVDGSGLRAL-AVPSVWLLGYGDWNGMASATLIGVTRYAREAV 344 (357)
T ss_dssp --EECSEEEECCCB--CCCC-GGGTTTTCBCTTSCBCBCTTSCBBS-SCTTEEECSSCGGGSTTCSSTTTHHHHHHHHH
T ss_pred --ecCCEEEECCCc--CCCC-cccCcccccCCCCCccccCCcccCC-CCCCeEEeccccccccchhhhhhhHHHHHHHH
Confidence 999999999994 7777 57777787 67899999999 776 999999999 666644444555555544333
No 78
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.97 E-value=9.4e-31 Score=270.48 Aligned_cols=300 Identities=14% Similarity=0.123 Sum_probs=193.5
Q ss_pred CCeEEEECCcHHHHHHHHhccC-C------CCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEE
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNN-P------SYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFW 130 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~-~------g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~ 130 (515)
+++|+||||||||++||..|++ . +++|+|||+.+.+++.. ...+.++.....++...+..++.+.++++ .
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~-~~gv~p~~~~~~~~~~~~~~~~~~~~v~~--~ 79 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLV-RSGVAPDHPKIKSISKQFEKTAEDPRFRF--F 79 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHH-HHTSCTTCTGGGGGHHHHHHHHTSTTEEE--E
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCcc-ccccCCCCCCHHHHHHHHHHHHhcCCCEE--E
Confidence 4799999999999999999988 6 99999999997765432 22333333444566667777788788654 3
Q ss_pred EeEEEEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCC-cCCCCCCCCC-CccccccChhHHHHHHHHHHHHHH
Q 010217 131 EAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGAR-ANTFNTPGVE-ENCNFLKEVEDAQRIRRNVIESFE 208 (515)
Q Consensus 131 ~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~-~~~~~ipG~~-~~~~~~~~~~~a~~~~~~~~~~~~ 208 (515)
.. + .+ ++.|++.+ + .+.||+||||||+. ++.+++||.+ .+++. ..+. ...+....+
T Consensus 80 ~~-v-~v---~~~v~~~~--------~---~~~~d~lViAtG~~~~~~~~ipG~~~~gv~~---~~~~---~~~~~~~~d 137 (456)
T 1lqt_A 80 GN-V-VV---GEHVQPGE--------L---SERYDAVIYAVGAQSDRMLNIPGEDLPGSIA---AVDF---VGWYNAHPH 137 (456)
T ss_dssp ES-C-CB---TTTBCHHH--------H---HHHSSEEEECCCCCEECCCCCTTTTSTTEEE---HHHH---HHHHTTCGG
T ss_pred ee-E-EE---CCEEEECC--------C---eEeCCEEEEeeCCCCCCCCCCCCCCCCCcEE---HHHH---HhhhhcCcc
Confidence 32 2 12 22343322 1 47899999999997 7888999975 23322 2222 111111111
Q ss_pred h-cCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHH----HHHhhCcc-cC-CC-cEEEEEeccccccccccH--
Q 010217 209 K-ASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDE----DLFKLYPK-VK-DS-VKITLLEAADHILNMFDK-- 278 (515)
Q Consensus 209 ~-~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~----~~~~~~p~-~~-~~-~~Vtlv~~~~~~l~~~~~-- 278 (515)
. ..++. ..+++|+|||+|++|+|+|..|.+...+ |+.....+ ++ .+ .+|+++.+++.+...|..
T Consensus 138 ~~~~~~~------~~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~~~~f~~~e 211 (456)
T 1lqt_A 138 FEQVSPD------LSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAAFTTLE 211 (456)
T ss_dssp GTTCCCC------CCSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGGGCCCCHHH
T ss_pred cccchhh------cCCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChhhhccChHH
Confidence 1 11111 1467999999999999999999875311 00000000 10 13 499999998876543321
Q ss_pred -----------------H------------------HHHHHHHHhhc------CCeEEEcCcEEEEEeCC-e---EEEEe
Q 010217 279 -----------------R------------------ITAFAEEKFSR------DGIDVKLGSMVVKVTDK-E---IFTKV 313 (515)
Q Consensus 279 -----------------~------------------~~~~~~~~l~~------~gV~v~~~~~v~~i~~~-~---v~~~~ 313 (515)
+ +.+.+.+.+++ .||++++++.+.+|.++ . +.+..
T Consensus 212 lrel~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~~~v~~v~~~~ 291 (456)
T 1lqt_A 212 LRELADLDGVDVVIDPAELDGITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGKRKVERIVLGR 291 (456)
T ss_dssp HHHGGGCTTEEEECCGGGGTTCCHHHHHHHCHHHHHHHHHHHHHHTCC-CTTSEEEEEECSEEEEEEECSSSCCEEEEEE
T ss_pred HHHhhcCCCceeeeChHHhccchhhhhhhccHHHHHHHHHHHHHhhcCCCCCCceEEEEeCCCCeEEecCCcEeEEEEEE
Confidence 1 12344555555 79999999999999764 2 44432
Q ss_pred c-------------CCCceEEEecCeEEEccCCCCccchHHHHHHhCCCCCCceeeCCCccccCCCCEEEeccccccCcc
Q 010217 314 R-------------GNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQTNRRALATDEWLRVEGSDSIYALGDCATVNQR 380 (515)
Q Consensus 314 ~-------------~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~~~~~~g~i~vd~~l~t~~~~~IyA~GD~~~~~~~ 380 (515)
. .+|+..+++||+||+|+|+. |+. + ..+.++.+|+|.||+++|+++.|+|||+|||+..+..
T Consensus 292 ~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~--p~~--l-~gl~~d~~g~i~vn~~~rvt~~pgvya~GD~~~gp~~ 366 (456)
T 1lqt_A 292 NELVSDGSGRVAAKDTGEREELPAQLVVRSVGYR--GVP--T-PGLPFDDQSGTIPNVGGRINGSPNEYVVGWIKRGPTG 366 (456)
T ss_dssp EEEEECSSSSEEEEEEEEEEEEECSEEEECSCEE--CCC--C-TTSCCBTTTTBCCEETTEETTCSSEEECTHHHHCSCS
T ss_pred EEecCCCcccccccCCCceEEEEcCEEEEccccc--cCC--C-CCCcccCCCCeeECCCCcCCCCCCEEEEeccCCCCch
Confidence 1 14554579999999999964 443 2 2344477889999999995599999999999987655
Q ss_pred chHHHHHHHHHhh
Q 010217 381 RVMEDIAAIFSKA 393 (515)
Q Consensus 381 ~~~~~~~~~~~~a 393 (515)
.+..++.++..++
T Consensus 367 ~i~~a~~~g~~~a 379 (456)
T 1lqt_A 367 VIGTNKKDAQDTV 379 (456)
T ss_dssp CTTHHHHHHHHHH
T ss_pred hHHHHHHHHHHHH
Confidence 4444555544433
No 79
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.97 E-value=1e-30 Score=285.47 Aligned_cols=317 Identities=15% Similarity=0.123 Sum_probs=202.7
Q ss_pred cCCCcchhhhhhh-ccccceeEeeccccCCCCCC-----CCCCCCCCCCCeEEEECCcHHHHHHHHhccCCCCeEEEEcC
Q 010217 16 DYSSLSKLIVIST-VGGGSLIAYSEANASSDAYS-----VAPPEMGIKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISP 89 (515)
Q Consensus 16 ~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~ 89 (515)
.+||.+|..|+.. .. ......|..+|....+. +....+...+++|+|||||+||++||..|++.|++|+|||+
T Consensus 342 ~~~ci~Cn~C~~~~~~-~~~~~~C~~n~~~g~e~~~~~~~~~~~~~~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~ 420 (729)
T 1o94_A 342 IRVCIGCNVCISRWEI-GGPPMICTQNATAGEEYRRGWHPEKFRQTKNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDT 420 (729)
T ss_dssp CCCCCCCCHHHHHHHH-SSSCCCCSSCTTTTTHHHHCCCTTCCCCCSSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred cccccccchhcccccc-cCCceeeccCccccccccccccccccccccCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeC
Confidence 3567766643322 11 12233465565543221 11123345678999999999999999999999999999999
Q ss_pred CCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEEEEecCCCEEEEeeCCccCCCCCceEEeecCEEEE
Q 010217 90 RNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVI 169 (515)
Q Consensus 90 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lvi 169 (515)
++.+++........++......+...+...+.... . ....++.++. ++.+.+.+. ..+.||+|||
T Consensus 421 ~~~~GG~~~~~~~~pg~~~~~~~~~~~~~~i~~~~-~---~~~~~v~i~~-~~~v~~~~~----------~~~~~d~vvi 485 (729)
T 1o94_A 421 AEKIGGHLNQVAALPGLGEWSYHRDYRETQITKLL-K---KNKESQLALG-QKPMTADDV----------LQYGADKVII 485 (729)
T ss_dssp SSSTTTTHHHHTTSTTCGGGHHHHHHHHHHHHHHH-H---HSTTCEEECS-CCCCCHHHH----------HTSCCSEEEE
T ss_pred CCCcCCeeeecccCCChHHHHHHHHHHHHHHHHhh-c---ccCCceEEEe-CeEEehhhc----------cccCCCEEEE
Confidence 98887754333333333222222222223333220 0 0000111221 223333221 1578999999
Q ss_pred ccCCC--------cCCCCCCCCCCccccccChhHHHHHHHHHHHHHHhcCCCCCCHHHHhccceEEEEC--CChhHHHHH
Q 010217 170 AMGAR--------ANTFNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVG--GGPTGVEFA 239 (515)
Q Consensus 170 AtG~~--------~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvG--gG~~g~E~A 239 (515)
|||+. |+.|++||.++....+.+..+..+ ... ..+++|+||| ||++|+|+|
T Consensus 486 AtG~~~~~~~~~~p~~~~ipG~~~~~~~v~~~~~~l~-----------~~~--------~~gk~VvVIG~GgG~~g~e~A 546 (729)
T 1o94_A 486 ATGARWNTDGTNCLTHDPIPGADASLPDQLTPEQVMD-----------GKK--------KIGKRVVILNADTYFMAPSLA 546 (729)
T ss_dssp CCCEEECSSCCCTTTSSCCTTCCTTSTTEECHHHHHH-----------CCS--------CCCSEEEEEECCCSSHHHHHH
T ss_pred cCCCCcccccccCccCCCCCCccccCCCEEEHHHHhc-----------CCC--------CCCCeEEEEcCCCCchHHHHH
Confidence 99998 456789997521111222222211 001 2567999999 999999999
Q ss_pred HHHHHhhHHHHHhhCcccCCCcEEEEEecccccccc--ccHHHHHHHHHHhhcCCeEEEcCcEEEEEeCCeEEEEec-CC
Q 010217 240 AELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM--FDKRITAFAEEKFSRDGIDVKLGSMVVKVTDKEIFTKVR-GN 316 (515)
Q Consensus 240 ~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~~--~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~v~~~~~-~~ 316 (515)
..|.++ +.+|+++++.+ +++. ++.. ...+.+.+++.||++++++.+++|+++++.+... .+
T Consensus 547 ~~l~~~--------------G~~Vtlv~~~~-l~~~~~~~~~-~~~~~~~l~~~GV~i~~~~~v~~i~~~~v~~~~~~~~ 610 (729)
T 1o94_A 547 EKLATA--------------GHEVTIVSGVH-LANYMHFTLE-YPNMMRRLHELHVEELGDHFCSRIEPGRMEIYNIWGD 610 (729)
T ss_dssp HHHHHT--------------TCEEEEEESSC-TTHHHHHTTC-HHHHHHHHHHTTCEEECSEEEEEEETTEEEEEETTCS
T ss_pred HHHHHc--------------CCEEEEEeccc-cccccccccc-HHHHHHHHHhCCCEEEcCcEEEEEECCeEEEEEecCC
Confidence 999986 67999999988 6542 3322 4567788899999999999999999887665532 12
Q ss_pred C-----------------ceEEEecCeEEEccCCCCccchHHHHHHhCCCCCCceeeCCCccccCCCCEEEeccccccCc
Q 010217 317 G-----------------ETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQTNRRALATDEWLRVEGSDSIYALGDCATVNQ 379 (515)
Q Consensus 317 G-----------------~~~~i~~D~vi~a~G~~~~p~~~~l~~~~~~~~~g~i~vd~~l~t~~~~~IyA~GD~~~~~~ 379 (515)
+ ++.+++||.||+|+| ..|++ .+++.++. .+|++++| ++|+|||+|||+..
T Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G--~~p~~-~l~~~l~~------~vd~~~~t-~~~~VyAiGD~~~~-- 678 (729)
T 1o94_A 611 GSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTG--RHSEC-TLWNELKA------RESEWAEN-DIKGIYLIGDAEAP-- 678 (729)
T ss_dssp CSCCCCCCTTSCSSCCCCCCEEEECSEEEEESC--EEECC-HHHHHHHH------TGGGTGGG-TCCEEEECGGGTSC--
T ss_pred ceEEecccccccccccCCcceeeeCCEEEECCC--CCCCh-HHHHHHhh------hccccccc-CCCCeEEEeCccch--
Confidence 2 123499999999999 57877 56655532 37889998 99999999999973
Q ss_pred cchHHHHHHHHHhhcc
Q 010217 380 RRVMEDIAAIFSKADK 395 (515)
Q Consensus 380 ~~~~~~~~~~~~~a~~ 395 (515)
..+..++.++..++..
T Consensus 679 ~~~~~A~~~G~~aA~~ 694 (729)
T 1o94_A 679 RLIADATFTGHRVARE 694 (729)
T ss_dssp CCHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHHHH
Confidence 4566777777766654
No 80
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.97 E-value=5.6e-31 Score=272.45 Aligned_cols=302 Identities=15% Similarity=0.158 Sum_probs=188.6
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCC--CeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEE
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPS--YDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAEC 134 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g--~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v 134 (515)
.+++|+|||||+||++||..|++.| ++|+|||+.+.+++. +...+.+......++...+.+++.+.++++. .+..+
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~-~~~g~~p~~~~~~~~~~~~~~~~~~~gv~~~-~~~~v 82 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGL-VRFGVAPDHPEVKNVINTFTQTARSDRCAFY-GNVEV 82 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTH-HHHTSCTTCGGGGGHHHHHHHHHTSTTEEEE-BSCCB
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCce-eecccCCCCccHHHHHHHHHHHHHhCCcEEE-eeeEE
Confidence 3579999999999999999999777 999999999876542 2222223333334556666777778886642 22222
Q ss_pred EEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCc-CCCCCCCCC-CccccccChhHHHHHHHHHHHHHHhcCC
Q 010217 135 FKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARA-NTFNTPGVE-ENCNFLKEVEDAQRIRRNVIESFEKASL 212 (515)
Q Consensus 135 ~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~-~~~~ipG~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 212 (515)
.+.|++.+ ..+.||+||||||+.+ +.|++||.+ .+++... .+........+...+
T Consensus 83 ------~~~V~~~~-----------~~~~~d~lVlAtGs~~~~~~~ipG~~~~gv~~~~------~~~~~~~~~~d~~~~ 139 (460)
T 1cjc_A 83 ------GRDVTVQE-----------LQDAYHAVVLSYGAEDHQALDIPGEELPGVFSAR------AFVGWYNGLPENREL 139 (460)
T ss_dssp ------TTTBCHHH-----------HHHHSSEEEECCCCCEECCCCCTTTTSTTEEEHH------HHHHHHTTCGGGTTC
T ss_pred ------eeEEEecc-----------ceEEcCEEEEecCcCCCCCCCCCCCCCCcEEEHH------HHHHHhhcCcccccc
Confidence 12233321 1478999999999995 788999975 3343322 111111100011111
Q ss_pred CCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHH----HHHhh-Cccc-CCCc-EEEEEeccccc-------------
Q 010217 213 PNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDE----DLFKL-YPKV-KDSV-KITLLEAADHI------------- 272 (515)
Q Consensus 213 ~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~----~~~~~-~p~~-~~~~-~Vtlv~~~~~~------------- 272 (515)
+. ...+++|+|||+|++|+|+|..|.+...+ ++... +..+ +.+. +|++++|++.+
T Consensus 140 ~~-----~~~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~~~~ft~~el~~l~ 214 (460)
T 1cjc_A 140 AP-----DLSCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPLQVAFTIKELREMI 214 (460)
T ss_dssp CC-----CTTSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGGGCCCCHHHHHHHH
T ss_pred cc-----CCCCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChHhhccCHHHHHHhh
Confidence 10 01467999999999999999999842100 00000 0000 1244 79999998765
Q ss_pred -cccc-------------------cH---HHHHHHHHHhhc--------------CCeEEEcCcEEEEEeCC----e---
Q 010217 273 -LNMF-------------------DK---RITAFAEEKFSR--------------DGIDVKLGSMVVKVTDK----E--- 308 (515)
Q Consensus 273 -l~~~-------------------~~---~~~~~~~~~l~~--------------~gV~v~~~~~v~~i~~~----~--- 308 (515)
++.. +. .+.+.+.+.+++ .||++++++.+.+|.++ .
T Consensus 215 ~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~v~~ 294 (460)
T 1cjc_A 215 QLPGTRPMLDPADFLGLQDRIKEAARPRKRLMELLLRTATEKPGVEEAARRASASRAWGLRFFRSPQQVLPSPDGRRAAG 294 (460)
T ss_dssp TCTTEEEECCGGGGTTHHHHTTTSCHHHHHHHHHHHHHHHSCCCHHHHHHHHTCSEEEEEECSEEEEEEEECTTSSSEEE
T ss_pred cCCCceeEechhhhcchhhhhhhccHHHHHHHHHHHHHHHhccccccccCCCCCCceEEEECCCChheEEcCCCCceEEE
Confidence 2210 11 023344445555 89999999999999743 2
Q ss_pred EEEEec------------CCCceEEEecCeEEEccCCCCccchHHHHHHh-CCCCCCceeeCCCccccCCCCEEEecccc
Q 010217 309 IFTKVR------------GNGETSSMPYGMVVWSTGIAPHAIIKDFMKQV-GQTNRRALATDEWLRVEGSDSIYALGDCA 375 (515)
Q Consensus 309 v~~~~~------------~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~-~~~~~g~i~vd~~l~t~~~~~IyA~GD~~ 375 (515)
+.+... .+|+..+++||+||+|+|+ .|+. + ..+ .++.+|+|.||+++||.++|+|||+|||+
T Consensus 295 v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~--~p~~--l-~gl~~~d~~g~i~vn~~~rt~~~p~vya~Gd~~ 369 (460)
T 1cjc_A 295 IRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGY--KSRP--I-DPSVPFDPKLGVVPNMEGRVVDVPGLYCSGWVK 369 (460)
T ss_dssp EEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCE--ECCC--C-CTTSCCBTTTTBCCEETTEETTCTTEEECTHHH
T ss_pred EEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCC--CCCC--C-CCCcccccCCCeeECCCCcCcCCCCEEEEEeCC
Confidence 333321 0355457999999999996 4543 2 233 44667899999999993389999999999
Q ss_pred ccCccchHHHHHHHHHhh
Q 010217 376 TVNQRRVMEDIAAIFSKA 393 (515)
Q Consensus 376 ~~~~~~~~~~~~~~~~~a 393 (515)
..+...+..++..++.++
T Consensus 370 ~g~~~~i~~a~~~g~~aa 387 (460)
T 1cjc_A 370 RGPTGVITTTMTDSFLTG 387 (460)
T ss_dssp HCTTCCHHHHHHHHHHHH
T ss_pred cCCCccHHHHHHHHHHHH
Confidence 866554545666655444
No 81
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.96 E-value=3.1e-30 Score=280.49 Aligned_cols=307 Identities=14% Similarity=0.067 Sum_probs=216.2
Q ss_pred CCCcchhhhhhhccccceeEeeccccCCCCCCC-----CCCCCCCCCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCC
Q 010217 17 YSSLSKLIVISTVGGGSLIAYSEANASSDAYSV-----APPEMGIKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (515)
Q Consensus 17 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~ 91 (515)
+||.+|..++.... ......|..+|....+.. ....+...++||||||||+||++||+.|++.|++|+|||+++
T Consensus 346 ~~c~~c~~C~~~~~-~~~~~~C~vnp~~g~e~~~~~~~~~~~~~~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~ 424 (690)
T 3k30_A 346 RECIGCNICVSGDL-TMSPIRCTQNPSMGEEWRRGWHPERIRAKESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGR 424 (690)
T ss_dssp CCCCCCCHHHHHHH-TTSCCCCSSCTTTTTTTTTCCCSSCCCCCSSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred ccccchhhhhhccc-CCCcccCCcCcccCcccccccCccccCcccccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 57777776544322 223446766776554322 122344567899999999999999999999999999999999
Q ss_pred CCccCCccchhccCcccccccccchHHHHhhc-CceEEEEEeEEEEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEc
Q 010217 92 YFAFTPLLPSVTCGTVEARSIVEPVRNIVRKK-NVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIA 170 (515)
Q Consensus 92 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviA 170 (515)
.+++........++......+..++...+.+. ++++.+ +. .+...+. ..+.||+||||
T Consensus 425 ~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~gv~~~~-~~----------~v~~~~~----------~~~~~d~lvlA 483 (690)
T 3k30_A 425 DLGGRVTQESALPGLSAWGRVKEYREAVLAELPNVEIYR-ES----------PMTGDDI----------VEFGFEHVITA 483 (690)
T ss_dssp SSCTHHHHHHTSTTCGGGGHHHHHHHHHHHTCTTEEEES-SC----------CCCHHHH----------HHTTCCEEEEC
T ss_pred CCCCEeeeccCCCchhHHHHHHHHHHHHHHHcCCCEEEE-CC----------eecHHHH----------hhcCCCEEEEc
Confidence 88877555555555555556666677777776 765422 21 1221111 25789999999
Q ss_pred cCCCc--------CCCCCCCCCCccccccChhHHHHHHHHHHHHHHhcCCCCCCHHHHhccceEEEEC--CChhHHHHHH
Q 010217 171 MGARA--------NTFNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVG--GGPTGVEFAA 240 (515)
Q Consensus 171 tG~~~--------~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvG--gG~~g~E~A~ 240 (515)
||+.| ..|++||.+.. .+.+..+.. .. .. ..+++|+||| +|.+|+|+|.
T Consensus 484 tG~~~~~~~~~~~~~~~i~G~~~~--~v~~~~~~l----------~~-~~--------~~g~~VvViG~ggG~~g~e~A~ 542 (690)
T 3k30_A 484 TGATWRTDGVARFHTTALPIAEGM--QVLGPDDLF----------AG-RL--------PDGKKVVVYDDDHYYLGGVVAE 542 (690)
T ss_dssp CCEEECSSCCSSSCSSCCCBCTTS--EEECHHHHH----------TT-CC--------CSSSEEEEEECSCSSHHHHHHH
T ss_pred CCCccccccccccCCCCCCCCCCC--cEEcHHHHh----------CC-CC--------CCCCEEEEEcCCCCccHHHHHH
Confidence 99984 46788887532 111222211 10 11 2567899999 9999999999
Q ss_pred HHHHhhHHHHHhhCcccCCCcEEEEEecccccccccc-HHHHHHHHHHhhcCCeEEEcCcEEEEEeCCeEEEEecCCCce
Q 010217 241 ELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFD-KRITAFAEEKFSRDGIDVKLGSMVVKVTDKEIFTKVRGNGET 319 (515)
Q Consensus 241 ~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~~~~-~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~v~~~~~~~G~~ 319 (515)
.|.++ +.+|+++++.+.+++..+ +.....+.+.+++.||+++++++|++++.+++.+....+++.
T Consensus 543 ~L~~~--------------g~~Vtlv~~~~~l~~~~~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~~~~~~~~ 608 (690)
T 3k30_A 543 LLAQK--------------GYEVSIVTPGAQVSSWTNNTFEVNRIQRRLIENGVARVTDHAVVAVGAGGVTVRDTYASIE 608 (690)
T ss_dssp HHHHT--------------TCEEEEEESSSSTTGGGGGGTCHHHHHHHHHHTTCEEEESEEEEEEETTEEEEEETTTCCE
T ss_pred HHHhC--------------CCeeEEEecccccccccccchhHHHHHHHHHHCCCEEEcCcEEEEEECCeEEEEEccCCeE
Confidence 99986 689999999998877543 556777889999999999999999999988877765444554
Q ss_pred EEEecCeEEEccCCCCccchHHHHHHhCCCCCCceeeCCCccccCCCCEEEeccccccCccchHHHHHHHHHhhcc
Q 010217 320 SSMPYGMVVWSTGIAPHAIIKDFMKQVGQTNRRALATDEWLRVEGSDSIYALGDCATVNQRRVMEDIAAIFSKADK 395 (515)
Q Consensus 320 ~~i~~D~vi~a~G~~~~p~~~~l~~~~~~~~~g~i~vd~~l~t~~~~~IyA~GD~~~~~~~~~~~~~~~~~~~a~~ 395 (515)
.+++||.||+|+| ..|+. .+++.++.. +. +| +.|+|||+|||+.. ..+..++.++..++..
T Consensus 609 ~~i~aD~VV~A~G--~~p~~-~l~~~l~~~--~~-------~t-~~~~VyaiGD~~~~--~~~~~A~~~g~~aa~~ 669 (690)
T 3k30_A 609 RELECDAVVMVTA--RLPRE-ELYLDLVAR--RD-------AG-EIASVRGIGDAWAP--GTIAAAVWSGRRAAEE 669 (690)
T ss_dssp EEEECSEEEEESC--EEECC-HHHHHHHHH--HH-------HT-SCSEEEECGGGTSC--BCHHHHHHHHHHHHHH
T ss_pred EEEECCEEEECCC--CCCCh-HHHHHHhhh--hc-------cc-CCCCEEEEeCCCch--hhHHHHHHHHHHHHHH
Confidence 5699999999999 57777 565554321 11 55 89999999999984 3456677777665543
No 82
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.96 E-value=2.9e-29 Score=261.23 Aligned_cols=282 Identities=14% Similarity=0.169 Sum_probs=182.1
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCC-----CeEEEEcCCCCCccCCcc--chhccC------------------------
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPS-----YDVQVISPRNYFAFTPLL--PSVTCG------------------------ 105 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g-----~~V~vie~~~~~~~~~~~--~~~~~g------------------------ 105 (515)
..++|||||||+||+++|..|++.| ++|+|||+++.++|.+.. +.....
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l~ 108 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYLH 108 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhHhhh
Confidence 3469999999999999999999888 999999999988876421 110000
Q ss_pred --------------cccccccccchHHHHhhcCceEEEEEeEEEEEecC---CC----EEEEeeCCccCCCCCceEEeec
Q 010217 106 --------------TVEARSIVEPVRNIVRKKNVDICFWEAECFKIDAE---NK----KVYCRSSQNTNLNGKEEFCMDY 164 (515)
Q Consensus 106 --------------~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~id~~---~~----~v~~~~~~~~~~~~~~~~~~~~ 164 (515)
.....++...+..+..+++++++ .+++|+.|+.. ++ .|.+.++. ++.+++.|
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~-~~~~V~~i~~~~~~~~~~~~~V~~~~g~------g~~~~~~~ 181 (463)
T 3s5w_A 109 KHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSR-YGEEVLRIEPMLSAGQVEALRVISRNAD------GEELVRTT 181 (463)
T ss_dssp HTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEE-ESEEEEEEEEEEETTEEEEEEEEEEETT------SCEEEEEE
T ss_pred hcCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEE-eCCEEEEEEEecCCCceEEEEEEEecCC------CceEEEEe
Confidence 00011222334444556677774 47789999876 44 34444432 23447999
Q ss_pred CEEEEccCCCcCCCC-CCCCCC--ccccccChhH-HHHHHHHHHHHHHhcCCCCCCHHHHhccceEEEECCChhHHHHHH
Q 010217 165 DYLVIAMGARANTFN-TPGVEE--NCNFLKEVED-AQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAA 240 (515)
Q Consensus 165 d~lviAtG~~~~~~~-ipG~~~--~~~~~~~~~~-a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~ 240 (515)
|+||+|||+.|..|+ +++... .++....+.+ ...+.. ...++++|+|||+|.+|+|+|.
T Consensus 182 d~lVlAtG~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~vvVvGgG~sg~e~a~ 244 (463)
T 3s5w_A 182 RALVVSPGGTPRIPQVFRALKGDGRVFHHSQYLEHMAKQPC-----------------SSGKPMKIAIIGGGQSAAEAFI 244 (463)
T ss_dssp SEEEECCCCEECCCGGGGGGTTCTTEEEGGGHHHHHCC------------------------CEEEEEECCSHHHHHHHH
T ss_pred CEEEECCCCCCCCcchhhhcCCCCcEEECHHHHhhHHHhhh-----------------cccCCCeEEEECCCHhHHHHHH
Confidence 999999999887665 333322 2222222211 000100 0124689999999999999999
Q ss_pred HHHHhhHHHHHhhCcccCCCcEEEEEecccccccc--------------------ccHHHHHHHHHHhhc----------
Q 010217 241 ELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM--------------------FDKRITAFAEEKFSR---------- 290 (515)
Q Consensus 241 ~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~~--------------------~~~~~~~~~~~~l~~---------- 290 (515)
.|.+.. ++.+|++++|.+.+++. ++++....+.+.+..
T Consensus 245 ~l~~~~------------~~~~Vt~v~r~~~~~p~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 312 (463)
T 3s5w_A 245 DLNDSY------------PSVQADMILRASALKPADDSPFVNEVFAPKFTDLIYSREHAERERLLREYHNTNYSVVDTDL 312 (463)
T ss_dssp HHHHHC------------TTEEEEEECSSSSCCBCCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGGTSSCBCHHH
T ss_pred HHHhcC------------CCCeEEEEEeCCCCcCccCCccchhccChhHHHHHhcCCHHHHHHHHHHhhccCCCcCCHHH
Confidence 999862 25799999999877542 223333333333332
Q ss_pred ----------------CCeEEEcCcEEEEEeC--Ce--EEEEecCCCceEEEecCeEEEccCCCCccchHHHHHHhCCCC
Q 010217 291 ----------------DGIDVKLGSMVVKVTD--KE--IFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQTN 350 (515)
Q Consensus 291 ----------------~gV~v~~~~~v~~i~~--~~--v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~~~~~ 350 (515)
.||++++++.|++++. +. +.+....+|+..++++|.||+|||+.+++.. .++..+....
T Consensus 313 ~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p~~~~-~~l~~l~~~~ 391 (463)
T 3s5w_A 313 IERIYGVFYRQKVSGIPRHAFRCMTTVERATATAQGIELALRDAGSGELSVETYDAVILATGYERQLHR-QLLEPLAEYL 391 (463)
T ss_dssp HHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEETTEEEEEEEETTTCCEEEEEESEEEECCCEECCC-C-TTTGGGGGGB
T ss_pred HHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecCCEEEEEEEEcCCCCeEEEECCEEEEeeCCCCCCcc-chhHHHHHHh
Confidence 6999999999999974 33 4444444787777999999999996544224 4444443212
Q ss_pred CCceeeCCCccccC----CCCEEEeccccc
Q 010217 351 RRALATDEWLRVEG----SDSIYALGDCAT 376 (515)
Q Consensus 351 ~g~i~vd~~l~t~~----~~~IyA~GD~~~ 376 (515)
|+|.||+++++.. .|+|||+|||..
T Consensus 392 -g~i~v~~~~~~~~~~~~~~~Ifa~G~~~~ 420 (463)
T 3s5w_A 392 -GDHEIGRDYRLQTDERCKVAIYAQGFSQA 420 (463)
T ss_dssp -C--CCCTTSBCCBCTTBCSEEEESSCCHH
T ss_pred -CCcccCcccccccCCCCCCeEEEcCCCcc
Confidence 8899999999744 456999999986
No 83
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.96 E-value=6.2e-29 Score=258.01 Aligned_cols=256 Identities=12% Similarity=0.173 Sum_probs=178.9
Q ss_pred CCeEEEECCcHHHHHHHHhccC---CCCe---EEEEcCCCCCccCCccch------------------hc----------
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNN---PSYD---VQVISPRNYFAFTPLLPS------------------VT---------- 103 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~---~g~~---V~vie~~~~~~~~~~~~~------------------~~---------- 103 (515)
.++|+|||||+||++||..|++ .|++ |+|||+++.+++...... ..
T Consensus 2 ~~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~ 81 (464)
T 2xve_A 2 ATRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEF 81 (464)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCB
T ss_pred CCcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhccc
Confidence 3799999999999999999998 9999 999999887765422110 00
Q ss_pred -------------cCcccccccccchHHHHhhcCce--EEEEEeEEEEEecCCC----EEEEeeCCccCCCCCceEEeec
Q 010217 104 -------------CGTVEARSIVEPVRNIVRKKNVD--ICFWEAECFKIDAENK----KVYCRSSQNTNLNGKEEFCMDY 164 (515)
Q Consensus 104 -------------~g~~~~~~~~~~~~~~~~~~~i~--v~~~~~~v~~id~~~~----~v~~~~~~~~~~~~~~~~~~~~ 164 (515)
........+..++..++++.++. ++ .+++|+.|+...+ .|++.+.. +++..++.|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~-~~~~V~~v~~~~~~~~~~V~~~~~~-----~g~~~~~~~ 155 (464)
T 2xve_A 82 ADYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIR-FNTAVRHVEFNEDSQTFTVTVQDHT-----TDTIYSEEF 155 (464)
T ss_dssp TTBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEE-CSEEEEEEEEETTTTEEEEEEEETT-----TTEEEEEEE
T ss_pred CCCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEE-eCCEEEEEEEcCCCCcEEEEEEEcC-----CCceEEEEc
Confidence 00111123444456666777876 64 4788999987665 56665421 222347899
Q ss_pred CEEEEccC--CCcCCCCCCCCCCc---cccccChhHHHHHHHHHHHHHHhcCCCCCCHHHHhccceEEEECCChhHHHHH
Q 010217 165 DYLVIAMG--ARANTFNTPGVEEN---CNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFA 239 (515)
Q Consensus 165 d~lviAtG--~~~~~~~ipG~~~~---~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A 239 (515)
|+||+||| +.|+.|++||.+.. ++....+.+ .....+++|+|||+|++|+|+|
T Consensus 156 d~VVvAtG~~s~p~~p~ipG~~~~~g~~~hs~~~~~----------------------~~~~~~k~VvVVG~G~sg~eiA 213 (464)
T 2xve_A 156 DYVVCCTGHFSTPYVPEFEGFEKFGGRILHAHDFRD----------------------ALEFKDKTVLLVGSSYSAEDIG 213 (464)
T ss_dssp SEEEECCCSSSSBCCCCCBTTTTCCSEEEEGGGCCC----------------------GGGGTTSEEEEECCSTTHHHHH
T ss_pred CEEEECCCCCCCCccCCCCCcccCCceEEehhhhCC----------------------HhHcCCCEEEEEcCCCCHHHHH
Confidence 99999999 88999999997642 222111111 0113568999999999999999
Q ss_pred HHHHHhhHHHHHhhCcccCCCcEEEEEeccccccccccHHHHHHHHHHhhcCCeEEEcCcEEEEEeCCeEEEEecCCCce
Q 010217 240 AELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTDKEIFTKVRGNGET 319 (515)
Q Consensus 240 ~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~v~~~~~~~G~~ 319 (515)
..|.++ +.+|+++++++.+++..- ..||+++ ..|++++++++.+ .+|+.
T Consensus 214 ~~l~~~--------------g~~V~li~~~~~~~~~~~------------~~~V~~~--~~V~~i~~~~V~~---~dG~~ 262 (464)
T 2xve_A 214 SQCYKY--------------GAKKLISCYRTAPMGYKW------------PENWDER--PNLVRVDTENAYF---ADGSS 262 (464)
T ss_dssp HHHHHT--------------TCSEEEEECSSCCCCCCC------------CTTEEEC--SCEEEECSSEEEE---TTSCE
T ss_pred HHHHHh--------------CCeEEEEEECCCCCCCCC------------CCceEEc--CCeEEEeCCEEEE---CCCCE
Confidence 999986 579999999888765311 2588887 7889998776554 46874
Q ss_pred EEEecCeEEEccCCCCccchHHHHH-HhCCC--CCCceeeCCC---ccccCCCCEEEeccccccCc
Q 010217 320 SSMPYGMVVWSTGIAPHAIIKDFMK-QVGQT--NRRALATDEW---LRVEGSDSIYALGDCATVNQ 379 (515)
Q Consensus 320 ~~i~~D~vi~a~G~~~~p~~~~l~~-~~~~~--~~g~i~vd~~---l~t~~~~~IyA~GD~~~~~~ 379 (515)
+++|.||+|||+ .|++ .++. .+++. .++.+ ++.+ +++ +.|+|||+|||+....
T Consensus 263 --i~~D~Vi~atG~--~p~~-~~l~~~~gl~~~~~~~v-~~~~~~~~~t-~~p~i~aiGd~~~~~~ 321 (464)
T 2xve_A 263 --EKVDAIILCTGY--IHHF-PFLNDDLRLVTNNRLWP-LNLYKGVVWE-DNPKFFYIGMQDQWYS 321 (464)
T ss_dssp --EECSEEEECCCB--CCCC-TTBCTTTCCCCCSSSCC-SSEETTTEES-SSTTEEECSCSCCSSC
T ss_pred --EeCCEEEECCCC--CCCC-CCcCcccccccCCCccc-ccccceEecC-CCCCEEEEeCcccccc
Confidence 899999999995 6766 4443 35662 33344 4433 455 8999999999987543
No 84
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.96 E-value=3.9e-29 Score=282.01 Aligned_cols=282 Identities=14% Similarity=0.110 Sum_probs=187.0
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCC-eEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEE
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSY-DVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECF 135 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~-~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~ 135 (515)
..+||+||||||||++||.+|++.|+ +|+|||+.+.+++.. .+..+....+.++.....+++++.|++++. +..+
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~--~~~ip~~~~~~~~~~~~~~~~~~~gv~~~~-~~~v- 261 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLS--TSEIPQFRLPYDVVNFEIELMKDLGVKIIC-GKSL- 261 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHH--HHTSCTTTSCHHHHHHHHHHHHTTTCEEEE-SCCB-
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccc--cccCCcccCCHHHHHHHHHHHHHCCcEEEc-ccEe-
Confidence 46899999999999999999999999 799999988877642 111111112234444556778888877532 2222
Q ss_pred EEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCC-CcCCCCC-CCCC--CccccccChhHHHHHHHHHHHHHH---
Q 010217 136 KIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGA-RANTFNT-PGVE--ENCNFLKEVEDAQRIRRNVIESFE--- 208 (515)
Q Consensus 136 ~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~-~~~~~~i-pG~~--~~~~~~~~~~~a~~~~~~~~~~~~--- 208 (515)
. .+.+++.+. ..+.||+||||||+ .|+.+++ +|.. ++++. ..+ +...+.+...
T Consensus 262 ~----~~~v~~~~~----------~~~~~d~vvlAtGa~~p~~l~~~~G~~~~~gv~~---a~~---~L~~~~~~~~~~~ 321 (1025)
T 1gte_A 262 S----ENEITLNTL----------KEEGYKAAFIGIGLPEPKTDDIFQGLTQDQGFYT---SKD---FLPLVAKSSKAGM 321 (1025)
T ss_dssp S----TTSBCHHHH----------HHTTCCEEEECCCCCEECCCGGGTTCCTTTTEEE---HHH---HHHHHHHHHCBTT
T ss_pred c----cceEEhhhc----------CccCCCEEEEecCCCCCCCCCCCCCCCCCCCEEE---hHH---HHHHHHhhccccc
Confidence 1 123333321 14789999999999 5877665 4653 23332 122 2222211100
Q ss_pred ---hcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccc-cccccccHHHHHHH
Q 010217 209 ---KASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAAD-HILNMFDKRITAFA 284 (515)
Q Consensus 209 ---~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~-~~l~~~~~~~~~~~ 284 (515)
...++. .+++|+|||||++|+|+|..+.+++ ..+||++++.+ .+++.++.++
T Consensus 322 ~~~~~~~~~-------~~~~VvVIGgG~~g~e~A~~~~~~G-------------~~~Vtvv~r~~~~~~~~~~~e~---- 377 (1025)
T 1gte_A 322 CACHSPLPS-------IRGAVIVLGAGDTAFDCATSALRCG-------------ARRVFLVFRKGFVNIRAVPEEV---- 377 (1025)
T ss_dssp BSCCCCCCC-------CCSEEEEECSSHHHHHHHHHHHHTT-------------CSEEEEECSSCGGGCCSCHHHH----
T ss_pred ccccccccc-------cCCcEEEECCChHHHHHHHHHHHcC-------------CCEEEEEEecChhhCCCCHHHH----
Confidence 001121 2459999999999999999999863 13899999988 4667666654
Q ss_pred HHHhhcCCeEEEcCcEEEEEeC--CeEE---EEe---cCC-------CceEEEecCeEEEccCCCCccchHHHHHH-hCC
Q 010217 285 EEKFSRDGIDVKLGSMVVKVTD--KEIF---TKV---RGN-------GETSSMPYGMVVWSTGIAPHAIIKDFMKQ-VGQ 348 (515)
Q Consensus 285 ~~~l~~~gV~v~~~~~v~~i~~--~~v~---~~~---~~~-------G~~~~i~~D~vi~a~G~~~~p~~~~l~~~-~~~ 348 (515)
+.+++.||++++++.++++.. +.+. +.. ..+ |+..++++|.||+|+|. .|+...|+.+ .++
T Consensus 378 -~~~~~~Gv~~~~~~~~~~i~~~~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~--~~~~~~l~~~~~gl 454 (1025)
T 1gte_A 378 -ELAKEEKCEFLPFLSPRKVIVKGGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGS--VLRDPKVKEALSPI 454 (1025)
T ss_dssp -HHHHHTTCEEECSEEEEEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCE--ECCCHHHHHHTTTS
T ss_pred -HHHHHcCCEEEeCCCceEEEccCCeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCC--CCCchhhhhcccCc
Confidence 456778999999999999863 3332 221 012 33346999999999994 4433366665 366
Q ss_pred --CCCCceeeCC-CccccCCCCEEEeccccccCccchHHHHHHHHH
Q 010217 349 --TNRRALATDE-WLRVEGSDSIYALGDCATVNQRRVMEDIAAIFS 391 (515)
Q Consensus 349 --~~~g~i~vd~-~l~t~~~~~IyA~GD~~~~~~~~~~~~~~~~~~ 391 (515)
+.+|+|.||+ ++|| +.|+|||+|||+..+. .+..++.++..
T Consensus 455 ~~~~~G~I~vd~~~~~T-s~~~VfA~GD~~~~~~-~~~~A~~~G~~ 498 (1025)
T 1gte_A 455 KFNRWDLPEVDPETMQT-SEPWVFAGGDIVGMAN-TTVESVNDGKQ 498 (1025)
T ss_dssp CBCTTSSBCCCTTTCBC-SSTTEEECSGGGCSCC-CHHHHHHHHHH
T ss_pred eECCCCCEEECCCCCcc-CCCCEEEeCCCCCCch-HHHHHHHHHHH
Confidence 6789999997 8998 9999999999998654 34444444443
No 85
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.96 E-value=6.3e-29 Score=269.58 Aligned_cols=290 Identities=16% Similarity=0.164 Sum_probs=202.0
Q ss_pred eccccCCCCCCCCCCCCCCCCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchH
Q 010217 38 SEANASSDAYSVAPPEMGIKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVR 117 (515)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 117 (515)
|..+|....+......+...+++|+|||||+||++||..|++.|++|+|||+++.+++...+....++.....++...+.
T Consensus 353 C~~np~~~~e~~~~~~~~~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~ 432 (671)
T 1ps9_A 353 CLVNPRACHETKMPILPAVQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYR 432 (671)
T ss_dssp CSSCTTTTCTTTSCCCSCSSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHTTSTTCTTHHHHHHHHH
T ss_pred EEeCcccccccccCCCCCCCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeeccccCCCHHHHHHHHHHHH
Confidence 55566543332222334456789999999999999999999999999999999988877544444444333233444566
Q ss_pred HHHhhcCceEEEEEeEEEEEecCCCEEEEeeCCccCCCCCceEEe-ecCEEEEccCCCcCCCCCCCCCC-ccccccChhH
Q 010217 118 NIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCM-DYDYLVIAMGARANTFNTPGVEE-NCNFLKEVED 195 (515)
Q Consensus 118 ~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~-~~d~lviAtG~~~~~~~ipG~~~-~~~~~~~~~~ 195 (515)
..+++.++++++ +..+ .. . .+ .||+||||||+.|+.|++||.+. +++. ..+
T Consensus 433 ~~~~~~gv~~~~-~~~v----------~~---~----------~~~~~d~lviAtG~~p~~~~i~G~~~~~v~~---~~~ 485 (671)
T 1ps9_A 433 RMIEVTGVTLKL-NHTV----------TA---D----------QLQAFDETILASGIVPRTPPIDGIDHPKVLS---YLD 485 (671)
T ss_dssp HHHHHHTCEEEE-SCCC----------CS---S----------SSCCSSEEEECCCEEECCCCCBTTTSTTEEE---HHH
T ss_pred HHHHHcCCEEEe-CcEe----------cH---H----------HhhcCCEEEEccCCCcCCCCCCCCCCCcEee---HHH
Confidence 777788877532 2211 00 0 34 89999999999999999999763 2332 111
Q ss_pred HHHHHHHHHHHHHhcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHH------HHhh----------------
Q 010217 196 AQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDED------LFKL---------------- 253 (515)
Q Consensus 196 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~------~~~~---------------- 253 (515)
. + .. . ...+++|+|||||++|+|+|..|.+++.+. +.+.
T Consensus 486 ~------l----~~---~------~~~~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~~~~~~~~~ 546 (671)
T 1ps9_A 486 V------L----RD---K------APVGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQ 546 (671)
T ss_dssp H------H----TS---C------CCCCSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTCCSGGGBCTT
T ss_pred H------h----hC---C------CCCCCeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhccccccccccccccc
Confidence 1 1 10 0 024679999999999999999998765321 1111
Q ss_pred Cccc-CCCcEEEEEeccccccc-cccHHHHHHHHHHhhcCCeEEEcCcEEEEEeCCeEEEEecCCCceEEEecCeEEEcc
Q 010217 254 YPKV-KDSVKITLLEAADHILN-MFDKRITAFAEEKFSRDGIDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWST 331 (515)
Q Consensus 254 ~p~~-~~~~~Vtlv~~~~~~l~-~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~v~~~~~~~G~~~~i~~D~vi~a~ 331 (515)
.|.. ....+|+++++.+..+. .+++.....+.+.|++.||++++++.+++++++++.+. .+|+..++++|.||||+
T Consensus 547 ~~~~~~~~~~v~l~~~~~~~l~~~l~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~v~~~--~~G~~~~i~~D~Vi~a~ 624 (671)
T 1ps9_A 547 GMQIPRSPRQIVMLQRKASKPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKIDDDGLHVV--INGETQVLAVDNVVICA 624 (671)
T ss_dssp CCCCCCCSSEEEEECSSCSCTTTTSCTTTHHHHHHHHHHTTCEEECSCEEEEEETTEEEEE--ETTEEEEECCSEEEECC
T ss_pred ccccCCCCcEEEEEEecchhhccccccccHHHHHHHHHhcCCEEEeCcEEEEEeCCeEEEe--cCCeEEEEeCCEEEECC
Confidence 1221 12368999998876654 46667777888999999999999999999998887664 36765579999999999
Q ss_pred CCCCccchHHHHHHhCCCCCCceeeCCCccccCCCCEEEeccccccCccchHHHHHHHHHhh
Q 010217 332 GIAPHAIIKDFMKQVGQTNRRALATDEWLRVEGSDSIYALGDCATVNQRRVMEDIAAIFSKA 393 (515)
Q Consensus 332 G~~~~p~~~~l~~~~~~~~~g~i~vd~~l~t~~~~~IyA~GD~~~~~~~~~~~~~~~~~~~a 393 (515)
| ..|++ .|++.+. . ..++||++|||+......+..++.+++.+|
T Consensus 625 G--~~p~~-~l~~~l~--------------~-~g~~v~aiGD~~~~~~~~~~~A~~~g~~aA 668 (671)
T 1ps9_A 625 G--QEPNR-ALAQPLI--------------D-SGKTVHLIGGCDVAMELDARRAIAQGTRLA 668 (671)
T ss_dssp C--EEECC-TTHHHHH--------------T-TTCCEEECGGGTCCSSCCHHHHHHHHHHHH
T ss_pred C--ccccH-HHHHHHH--------------h-cCCCEEEECCcCccCchhHHHHHHHHHHHH
Confidence 9 57776 5555431 1 236899999999876556777777777655
No 86
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.96 E-value=4.4e-29 Score=279.70 Aligned_cols=284 Identities=14% Similarity=0.140 Sum_probs=193.8
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccc--hhccCcccccccccchHHHHhhc-CceEEEEEeEE
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLP--SVTCGTVEARSIVEPVRNIVRKK-NVDICFWEAEC 134 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~-~i~v~~~~~~v 134 (515)
.+|||||||||||++||..|++.|++|+|||+++.++++.... ....+. ...++...+.+.+.++ ++++ +.+.+|
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~~~~k~~i~~~-~~~~~~~~~~~~l~~~~~v~~-~~~~~V 205 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLLDTAGEQIDGM-DSSAWIEQVTSELAEAEETTH-LQRTTV 205 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGGGSSCCEETTE-EHHHHHHHHHHHHHHSTTEEE-ESSEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceeccCCccccCCC-CHHHHHHHHHHHHhhcCCcEE-EeCCEE
Confidence 5789999999999999999999999999999998888665420 111111 1122333333445554 7665 346688
Q ss_pred EEEecCCCEEEEeeCCc-cCCC------CCceEEeecCEEEEccCCCcCCCCCCCCC-CccccccChhHHHHHHHHHHHH
Q 010217 135 FKIDAENKKVYCRSSQN-TNLN------GKEEFCMDYDYLVIAMGARANTFNTPGVE-ENCNFLKEVEDAQRIRRNVIES 206 (515)
Q Consensus 135 ~~id~~~~~v~~~~~~~-~~~~------~~~~~~~~~d~lviAtG~~~~~~~ipG~~-~~~~~~~~~~~a~~~~~~~~~~ 206 (515)
..++..+....+....+ ..+. ++....+.||+||||||+.|+.+++||++ ++++...+. .. .+.
T Consensus 206 ~~i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~~~~ipG~~~~gv~~~~~~---~~---~l~-- 277 (965)
T 2gag_A 206 FGSYDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHERPIVFENNDRPGIMLAGAV---RS---YLN-- 277 (965)
T ss_dssp EEEETTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEECCCCCBTCCSTTEEEHHHH---HH---HHH--
T ss_pred EeeecCCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCccCCCCCCCCCCCCEEEhHHH---HH---HHH--
Confidence 88887655433321110 0110 12224799999999999999999999986 344332221 11 111
Q ss_pred HHhcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccccccccHHHHHHHHH
Q 010217 207 FEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEE 286 (515)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~ 286 (515)
. .. ...+++|+|||+|++|+|+|..|.++ +.+|+++++.+.+++. .+
T Consensus 278 --~--~~------~~~gk~vvViGgG~~g~E~A~~L~~~--------------G~~Vtvv~~~~~~~~~---------~~ 324 (965)
T 2gag_A 278 --R--YG------VRAGARIAVATTNDSAYELVRELAAT--------------GGVVAVIDARSSISAA---------AA 324 (965)
T ss_dssp --T--TC------EESCSSEEEEESSTTHHHHHHHHGGG--------------TCCSEEEESCSSCCHH---------HH
T ss_pred --h--cC------CCCCCeEEEEcCCHHHHHHHHHHHHc--------------CCcEEEEECCCccchh---------HH
Confidence 0 00 02457999999999999999999886 5789999999877532 46
Q ss_pred HhhcCCeEEEcCcEEEEEeC--C----eEEEEec-C---CCceEEEecCeEEEccCCCCccchHHHHHHhCCCCCCceee
Q 010217 287 KFSRDGIDVKLGSMVVKVTD--K----EIFTKVR-G---NGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQTNRRALAT 356 (515)
Q Consensus 287 ~l~~~gV~v~~~~~v~~i~~--~----~v~~~~~-~---~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~~~~~~g~i~v 356 (515)
.+++.||++++++.+.++.+ + .+++.+. . +|+..+++||.|++++| ..|++ .++... .+.|.+
T Consensus 325 ~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G--~~P~~-~l~~~~----~g~i~v 397 (965)
T 2gag_A 325 QAVADGVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGG--FNPVV-HLHSQR----QGKLDW 397 (965)
T ss_dssp HHHHTTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECC--EEECC-HHHHHT----TCCEEE
T ss_pred HHHhCCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCC--cCcCh-HHHHhC----CCcEEE
Confidence 68889999999999999975 3 2444320 1 25445699999999999 58888 566554 468999
Q ss_pred CCCccc----cCCCCEEEeccccccCccchHHHHHHHHHhh
Q 010217 357 DEWLRV----EGSDSIYALGDCATVNQRRVMEDIAAIFSKA 393 (515)
Q Consensus 357 d~~l~t----~~~~~IyA~GD~~~~~~~~~~~~~~~~~~~a 393 (515)
|++++. ++.|+|||+|||+..+. +..++.++..++
T Consensus 398 d~~~~~~v~~ts~p~IyAaGD~a~~~~--l~~A~~~G~~aA 436 (965)
T 2gag_A 398 DTTIHAFVPADAVANQHLAGAMTGRLD--TASALSTGAATG 436 (965)
T ss_dssp ETTTTEEEECSCCTTEEECGGGGTCCS--HHHHHHHHHHHH
T ss_pred cCcccccccCCCCCCEEEEEecCCchh--HHHHHHHHHHHH
Confidence 998871 38999999999998754 334555544433
No 87
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.95 E-value=1e-26 Score=240.79 Aligned_cols=256 Identities=15% Similarity=0.126 Sum_probs=171.4
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCC--eEEEEcCCCCCccCCccchhc----------------------------cCc
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSY--DVQVISPRNYFAFTPLLPSVT----------------------------CGT 106 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~--~V~vie~~~~~~~~~~~~~~~----------------------------~g~ 106 (515)
+.++|+|||||+||+++|..|++.|. +|+|||+++.+++........ ...
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~ 84 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPL 84 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCch
Confidence 35899999999999999999999999 999999987665432211100 000
Q ss_pred ---------------------------ccccccccchHHHHhhcCceEEEEEeEEEEEecCCCE--EEEeeCCccCCCCC
Q 010217 107 ---------------------------VEARSIVEPVRNIVRKKNVDICFWEAECFKIDAENKK--VYCRSSQNTNLNGK 157 (515)
Q Consensus 107 ---------------------------~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~--v~~~~~~~~~~~~~ 157 (515)
.....+...+..++...+..++ .+++|+.|+...+. |++.+.. ++
T Consensus 85 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~-~~t~V~~v~~~~~~~~V~~~~~~-----~G 158 (447)
T 2gv8_A 85 YRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIK-LATDVLDIEKKDGSWVVTYKGTK-----AG 158 (447)
T ss_dssp CTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEE-CSEEEEEEEEETTEEEEEEEESS-----TT
T ss_pred hhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEE-eCCEEEEEEeCCCeEEEEEeecC-----CC
Confidence 0001222334455555566664 47899999877664 4444311 12
Q ss_pred c-eEEeecCEEEEccCC--CcCCCCCCCCCCc-------cccccChhHHHHHHHHHHHHHHhcCCCCCCHHHHhccceEE
Q 010217 158 E-EFCMDYDYLVIAMGA--RANTFNTPGVEEN-------CNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFV 227 (515)
Q Consensus 158 ~-~~~~~~d~lviAtG~--~~~~~~ipG~~~~-------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv 227 (515)
+ ..++.||+||+|||+ .|+.|++||.++. ++..+.+.+ .....+++|+
T Consensus 159 ~~~~~~~~d~VVvAtG~~s~p~~p~i~G~~~~~~~~~g~v~~~~~~~~----------------------~~~~~~k~Vv 216 (447)
T 2gv8_A 159 SPISKDIFDAVSICNGHYEVPYIPNIKGLDEYAKAVPGSVLHSSLFRE----------------------PELFVGESVL 216 (447)
T ss_dssp CCEEEEEESEEEECCCSSSSBCBCCCBTHHHHHHHSTTSEEEGGGCCC----------------------GGGGTTCCEE
T ss_pred CeeEEEEeCEEEECCCCCCCCCCCCCCChhhhhccCCccEEEecccCC----------------------hhhcCCCEEE
Confidence 2 346899999999998 7888899996421 221111111 1113568999
Q ss_pred EECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcE-EEEEeccccccccccHHHHHHHHHHhhcCCeEEEcCcEEEEEeC
Q 010217 228 IVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVK-ITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTD 306 (515)
Q Consensus 228 VvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~-Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~ 306 (515)
|||+|++|+|+|..|.++ +.+ |+++++.+.+ +++.||.+ ...|+++..
T Consensus 217 VvG~G~sg~e~A~~l~~~--------------~~~~V~l~~r~~~~---------------l~~~~i~~--~~~v~~~~~ 265 (447)
T 2gv8_A 217 VVGGASSANDLVRHLTPV--------------AKHPIYQSLLGGGD---------------IQNESLQQ--VPEITKFDP 265 (447)
T ss_dssp EECSSHHHHHHHHHHTTT--------------SCSSEEEECTTCCS---------------CBCSSEEE--ECCEEEEET
T ss_pred EEccCcCHHHHHHHHHHH--------------hCCcEEEEeCCCCc---------------CCCCCeEE--ecCeEEEec
Confidence 999999999999999886 467 9999998754 45678875 467888853
Q ss_pred --CeEEEEecCCCceEEEecCeEEEccCCCCccchHHH-----HHHh--CCCCCCceeeCCCccc--cCCCCEEEecccc
Q 010217 307 --KEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDF-----MKQV--GQTNRRALATDEWLRV--EGSDSIYALGDCA 375 (515)
Q Consensus 307 --~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l-----~~~~--~~~~~g~i~vd~~l~t--~~~~~IyA~GD~~ 375 (515)
+.+.+ .+|+. ++++|.||+|||+ .|++ .+ ++.+ ++..++.+.++.+.++ ++.|+||++|||.
T Consensus 266 ~~~~v~~---~dG~~-~~~~D~vi~atG~--~~~~-~~l~~~~l~~~~~~i~~~~~~~~~~~~~v~~~~~p~l~~~G~~~ 338 (447)
T 2gv8_A 266 TTREIYL---KGGKV-LSNIDRVIYCTGY--LYSV-PFPSLAKLKSPETKLIDDGSHVHNVYQHIFYIPDPTLAFVGLAL 338 (447)
T ss_dssp TTTEEEE---TTTEE-ECCCSEEEECCCB--CCCC-CCHHHHSCCSTTTCCCSSSSSCCSEETTTEETTCTTEEESSCCB
T ss_pred CCCEEEE---CCCCE-eccCCEEEECCCC--CcCC-CCCcccccccccCceecCCCcccccccccccCCCCcEEEEeccc
Confidence 33433 46763 4799999999995 6665 44 3332 2333455555555542 3899999999998
Q ss_pred ccC
Q 010217 376 TVN 378 (515)
Q Consensus 376 ~~~ 378 (515)
...
T Consensus 339 ~~~ 341 (447)
T 2gv8_A 339 HVV 341 (447)
T ss_dssp SSC
T ss_pred ccc
Confidence 764
No 88
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.94 E-value=4.7e-27 Score=247.54 Aligned_cols=265 Identities=16% Similarity=0.207 Sum_probs=179.4
Q ss_pred CCCeEEEECCcHHHHHHHHhcc-CCCCeEEEEcCCCCCccCCcc---chhcc-----------------------Ccccc
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLN-NPSYDVQVISPRNYFAFTPLL---PSVTC-----------------------GTVEA 109 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~-~~g~~V~vie~~~~~~~~~~~---~~~~~-----------------------g~~~~ 109 (515)
+.++|+|||||+||+++|..|+ +.|++|+|||+++.++++... +.+.+ .....
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~ 86 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQ 86 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCH
Confidence 3579999999999999999999 999999999998877654211 11100 00111
Q ss_pred cccccchHHHHhhcCc--eEEEEEeEEEEEecCCC----EEEEeeCCccCCCCCceEEeecCEEEEccC--CCcCCCCCC
Q 010217 110 RSIVEPVRNIVRKKNV--DICFWEAECFKIDAENK----KVYCRSSQNTNLNGKEEFCMDYDYLVIAMG--ARANTFNTP 181 (515)
Q Consensus 110 ~~~~~~~~~~~~~~~i--~v~~~~~~v~~id~~~~----~v~~~~~~~~~~~~~~~~~~~~d~lviAtG--~~~~~~~ip 181 (515)
.++...+...++++++ .++ .+++|+.++.+++ .|++.++. ++.||+||+||| +.|+.|++|
T Consensus 87 ~ei~~~l~~~~~~~g~~~~i~-~~~~V~~i~~~~~~~~~~V~~~~G~----------~i~ad~lV~AtG~~s~p~~p~ip 155 (540)
T 3gwf_A 87 PEILEYLEDVVDRFDLRRHFK-FGTEVTSALYLDDENLWEVTTDHGE----------VYRAKYVVNAVGLLSAINFPNLP 155 (540)
T ss_dssp HHHHHHHHHHHHHTTCGGGEE-ESCCEEEEEEETTTTEEEEEETTSC----------EEEEEEEEECCCSCCSBCCCCCT
T ss_pred HHHHHHHHHHHHHcCCcceeE-eccEEEEEEEeCCCCEEEEEEcCCC----------EEEeCEEEECCcccccCCCCCCC
Confidence 2344556667777887 664 4778988887665 44443322 789999999999 689999999
Q ss_pred CCCCc---cccccChhHHHHHHHHHHHHHHhcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccC
Q 010217 182 GVEEN---CNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVK 258 (515)
Q Consensus 182 G~~~~---~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~ 258 (515)
|.+.. .+......+ . ....+|+|+|||+|.+|+|+|..|.+.
T Consensus 156 G~~~f~g~~~~~~~~~~---------------~-------~~~~~krV~VIG~G~sgve~a~~l~~~------------- 200 (540)
T 3gwf_A 156 GLDTFEGETIHTAAWPE---------------G-------KSLAGRRVGVIGTGSTGQQVITSLAPE------------- 200 (540)
T ss_dssp TGGGCCSEEEEGGGCCS---------------S-------CCCTTSEEEEECCSHHHHHHHHHHTTT-------------
T ss_pred CccccCCCEEEeecCCC---------------c-------cccccceEEEECCCchHHHHHHHHHhh-------------
Confidence 98632 111111100 0 012568999999999999999999875
Q ss_pred CCcEEEEEecccc-cccccc----HHHHHHHH------------------------------------------------
Q 010217 259 DSVKITLLEAADH-ILNMFD----KRITAFAE------------------------------------------------ 285 (515)
Q Consensus 259 ~~~~Vtlv~~~~~-~l~~~~----~~~~~~~~------------------------------------------------ 285 (515)
+.+|++++|.+. +++.++ +...+.++
T Consensus 201 -~~~Vtv~~r~~~~i~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~ 279 (540)
T 3gwf_A 201 -VEHLTVFVRTPQYSVPVGNRPVNPEQIAEIKADYDRIWERAKNSAVAFGFEESTLPAMSVSEEERNRIFQEAWDHGGGF 279 (540)
T ss_dssp -CSEEEEEESSCCCEEECCCCBCCHHHHHHHHHTHHHHHHHHHTSSSCSSSCCCCCCGGGSCHHHHHHHHHHHHHHCCHH
T ss_pred -CCEEEEEECCCCccccCccCCCCHHHHHHHHhccHHHHHHHHhccccccccccchhhhhCCHHHHHHHHHHHHhcccch
Confidence 689999999988 344322 22211111
Q ss_pred ----------------------------------------------------------HHhhcCCeEEEc--CcEEEEEe
Q 010217 286 ----------------------------------------------------------EKFSRDGIDVKL--GSMVVKVT 305 (515)
Q Consensus 286 ----------------------------------------------------------~~l~~~gV~v~~--~~~v~~i~ 305 (515)
+.+.+.+|+++. ...|.+|.
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~dp~~~~~l~P~~~g~kR~~~~~~y~~~l~~~nV~lv~~~~~~I~~it 359 (540)
T 3gwf_A 280 RFMFGTFGDIATDEAANEAAASFIRAKVAEIIEDPETARKLMPKGLFAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVT 359 (540)
T ss_dssp HHHHTSCSCTTTCHHHHHHHHHHHHHHHHHHCCSHHHHHHHCCCSCCCSSCEEESSTGGGGGSTTEEEEETTTSCEEEEC
T ss_pred hhhhhhhhhhhcCHHHHHHHHHHHHHHHHHHcCCHHHHHhCCCCCCCccccCCCccHHHHhcCCCEEEEeCCCCCccEEe
Confidence 012256899986 78999999
Q ss_pred CCeEEEEecCCCceEEEecCeEEEccCCCCccchHHHHHHhCCCCCCceeeCC----------CccccCCCCEEEe-ccc
Q 010217 306 DKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQTNRRALATDE----------WLRVEGSDSIYAL-GDC 374 (515)
Q Consensus 306 ~~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~~~~~~g~i~vd~----------~l~t~~~~~IyA~-GD~ 374 (515)
++++.. .+|+. +++|+||+|||+ .++. .++..+++..++++.+++ .+.+.++||+|.+ |..
T Consensus 360 ~~gv~~---~dG~~--~~~DvIV~ATGf--~~~~-~~~~~~~i~g~~G~~l~~~w~~~~~~y~g~~v~gfPN~f~~~Gp~ 431 (540)
T 3gwf_A 360 AKGVVT---EDGVL--HELDVLVFATGF--DAVD-GNYRRIEIRGRDGLHINDHWDGQPTSYLGVSTANFPNWFMVLGPN 431 (540)
T ss_dssp SSEEEE---TTCCE--EECSEEEECCCB--SCSS-HHHHTSEEECGGGCBHHHHTSSSCCCBTTTBCTTCTTEEESSCSS
T ss_pred cCeEEc---CCCCE--EECCEEEECCcc--Cccc-cCcCcceEECCCCcCHHHhhccChhhccccccCCCCceEEEecCC
Confidence 988654 46875 999999999996 4544 344555553333333332 2556789999999 876
Q ss_pred cc
Q 010217 375 AT 376 (515)
Q Consensus 375 ~~ 376 (515)
+.
T Consensus 432 ~~ 433 (540)
T 3gwf_A 432 GP 433 (540)
T ss_dssp CB
T ss_pred CC
Confidence 54
No 89
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.94 E-value=4.9e-27 Score=245.63 Aligned_cols=253 Identities=18% Similarity=0.181 Sum_probs=172.8
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccch-hccCcc-cccccccchHHHHhhcCceEEEEEeEEE
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPS-VTCGTV-EARSIVEPVRNIVRKKNVDICFWEAECF 135 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~-~~~g~~-~~~~~~~~~~~~~~~~~i~v~~~~~~v~ 135 (515)
.+||+|||||+||++||.+|++. ++|+|||+++.+++...... ...+.. ...++...+.+.+ ..++++ +.+.+|.
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l-~~~v~~-~~~~~v~ 184 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKL-NENTKI-YLETSAL 184 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTC-CTTEEE-ETTEEEC
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHH-hcCCEE-EcCCEEE
Confidence 46899999999999999999988 99999999988877543211 111110 1122222222223 446665 3567888
Q ss_pred EEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCCCCCCC-CccccccChhHHHHHHHHHHHHHHhcCCCC
Q 010217 136 KIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVE-ENCNFLKEVEDAQRIRRNVIESFEKASLPN 214 (515)
Q Consensus 136 ~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ipG~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 214 (515)
.++.+++.+.+.... +++...+.||+||||||+.|+.|++||.+ ++++. ..++..+... ..
T Consensus 185 ~i~~~~~~~~~~~~~-----~~~~~~~~~d~lvlAtGa~~~~~~~~g~~~~gv~~---~~~~~~~~~~-------~~--- 246 (493)
T 1y56_A 185 GVFDKGEYFLVPVVR-----GDKLIEILAKRVVLATGAIDSTMLFENNDMPGVFR---RDFALEVMNV-------WE--- 246 (493)
T ss_dssp CCEECSSSEEEEEEE-----TTEEEEEEESCEEECCCEEECCCCCTTTTSTTEEE---HHHHHHHHHT-------SC---
T ss_pred EEEcCCcEEEEEEec-----CCeEEEEECCEEEECCCCCccCCCCCCCCCCCEEE---cHHHHHHHHh-------cc---
Confidence 888777655442211 22234799999999999999999999986 33433 2333222111 00
Q ss_pred CCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccccccccHHHHHHHHHHhhcCCeE
Q 010217 215 LSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGID 294 (515)
Q Consensus 215 ~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~ 294 (515)
...+++++|||+|++|+| +.+++.||+
T Consensus 247 -----~~~~~~vvViGgG~~gle------------------------------------------------~~l~~~GV~ 273 (493)
T 1y56_A 247 -----VAPGRKVAVTGSKADEVI------------------------------------------------QELERWGID 273 (493)
T ss_dssp -----BCSCSEEEEESTTHHHHH------------------------------------------------HHHHHHTCE
T ss_pred -----cCCCCEEEEECCCHHHHH------------------------------------------------HHHHhCCcE
Confidence 024579999999999877 234556999
Q ss_pred EEcCcEEEEEeCCe-EEEEecCCCceEEEecCeEEEccCCCCccchHHHHHHhCC----CCCCcee-eCCCccccCCCCE
Q 010217 295 VKLGSMVVKVTDKE-IFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ----TNRRALA-TDEWLRVEGSDSI 368 (515)
Q Consensus 295 v~~~~~v~~i~~~~-v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~~~----~~~g~i~-vd~~l~t~~~~~I 368 (515)
+++++.|.++..++ +..+.+.+|++ +++|.||+|+| ..|++ +|++.+++ +++|+|. ||++++ +.|+|
T Consensus 274 v~~~~~v~~i~~~~~v~~v~~~~g~~--i~aD~Vv~a~G--~~p~~-~l~~~~g~~~~~~~~g~i~~vd~~~~--s~~~v 346 (493)
T 1y56_A 274 YVHIPNVKRVEGNEKVERVIDMNNHE--YKVDALIFADG--RRPDI-NPITQAGGKLRFRRGYYSPVLDEYHR--IKDGI 346 (493)
T ss_dssp EEECSSEEEEECSSSCCEEEETTCCE--EECSEEEECCC--EEECC-HHHHHTTCCEEEETTEEEECCCTTSE--EETTE
T ss_pred EEeCCeeEEEecCCceEEEEeCCCeE--EEeCEEEECCC--cCcCc-hHHHhcCCCccccCCceeeccccccC--cCCCE
Confidence 99999999998643 33333456764 99999999999 57887 67888876 3577887 899999 78999
Q ss_pred EEeccccccCccchHHHHHHHHHhh
Q 010217 369 YALGDCATVNQRRVMEDIAAIFSKA 393 (515)
Q Consensus 369 yA~GD~~~~~~~~~~~~~~~~~~~a 393 (515)
||+|||+..+. +..++.++..++
T Consensus 347 ya~GD~~~~~~--~~~A~~~g~~aa 369 (493)
T 1y56_A 347 YVAGSAVSIKP--HYANYLEGKLVG 369 (493)
T ss_dssp EECSTTTCCCC--HHHHHHHHHHHH
T ss_pred EEEeccCCccC--HHHHHHHHHHHH
Confidence 99999998643 444555544433
No 90
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.92 E-value=1.1e-25 Score=237.56 Aligned_cols=170 Identities=15% Similarity=0.238 Sum_probs=120.6
Q ss_pred CCCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCc---cchhcc-----------------------Ccccc
Q 010217 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPL---LPSVTC-----------------------GTVEA 109 (515)
Q Consensus 56 ~~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~---~~~~~~-----------------------g~~~~ 109 (515)
...++|||||||+||+++|..|++.|++|+|||+++.++++.. .+.+.+ .....
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~ 98 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQ 98 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBH
T ss_pred CCCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCH
Confidence 3467999999999999999999999999999999877765321 111100 01112
Q ss_pred cccccchHHHHhhcCc--eEEEEEeEEEEEecCCC----EEEEeeCCccCCCCCceEEeecCEEEEccC--CCcCCCCCC
Q 010217 110 RSIVEPVRNIVRKKNV--DICFWEAECFKIDAENK----KVYCRSSQNTNLNGKEEFCMDYDYLVIAMG--ARANTFNTP 181 (515)
Q Consensus 110 ~~~~~~~~~~~~~~~i--~v~~~~~~v~~id~~~~----~v~~~~~~~~~~~~~~~~~~~~d~lviAtG--~~~~~~~ip 181 (515)
.++..++...++++++ +++ .+++|+.++.+++ .|++.++. ++.||+||+||| +.|+.|++|
T Consensus 99 ~ei~~yl~~~~~~~g~~~~i~-~~~~V~~i~~~~~~~~w~V~~~~G~----------~i~ad~lV~AtG~~s~p~~p~ip 167 (549)
T 4ap3_A 99 PEILAYLEHVADRFDLRRDIR-FDTRVTSAVLDEEGLRWTVRTDRGD----------EVSARFLVVAAGPLSNANTPAFD 167 (549)
T ss_dssp HHHHHHHHHHHHHTTCGGGEE-CSCCEEEEEEETTTTEEEEEETTCC----------EEEEEEEEECCCSEEECCCCCCT
T ss_pred HHHHHHHHHHHHHcCCCccEE-ECCEEEEEEEcCCCCEEEEEECCCC----------EEEeCEEEECcCCCCCCCCCCCC
Confidence 3445556677778886 664 4778999877665 44443322 789999999999 789999999
Q ss_pred CCCCc---cccccChh-HHHHHHHHHHHHHHhcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCccc
Q 010217 182 GVEEN---CNFLKEVE-DAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKV 257 (515)
Q Consensus 182 G~~~~---~~~~~~~~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~ 257 (515)
|.+.. .+...... +. + ...+|+|+|||+|.+|+|+|..|.+.
T Consensus 168 G~~~f~g~~~~~~~~~~~~---------------~-------~~~~krV~VIG~G~sgve~a~~l~~~------------ 213 (549)
T 4ap3_A 168 GLDRFTGDIVHTARWPHDG---------------V-------DFTGKRVGVIGTGSSGIQSIPIIAEQ------------ 213 (549)
T ss_dssp TGGGCCSEEEEGGGCCTTC---------------C-------CCBTCEEEEECCSHHHHHHHHHHHHH------------
T ss_pred CcccCCCceEEeccccccc---------------c-------ccCCCEEEEECCCchHHHHHHHHHhh------------
Confidence 98632 11111100 00 0 02578999999999999999999986
Q ss_pred CCCcEEEEEeccccc
Q 010217 258 KDSVKITLLEAADHI 272 (515)
Q Consensus 258 ~~~~~Vtlv~~~~~~ 272 (515)
+.+|++++|.+.+
T Consensus 214 --~~~Vtv~~r~~~~ 226 (549)
T 4ap3_A 214 --AEQLFVFQRSANY 226 (549)
T ss_dssp --BSEEEEEESSCCC
T ss_pred --CCEEEEEECCCCc
Confidence 5799999999873
No 91
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.92 E-value=1e-25 Score=237.56 Aligned_cols=178 Identities=12% Similarity=0.113 Sum_probs=116.9
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCc---cchhcc-----------------------Cccccc
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPL---LPSVTC-----------------------GTVEAR 110 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~---~~~~~~-----------------------g~~~~~ 110 (515)
..++|||||||+||+++|..|++.|++|+|||+++.++++.. +|...+ ......
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~~ 87 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQP 87 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCHH
Confidence 457999999999999999999999999999999987765421 111100 011123
Q ss_pred ccccchHHHHhhcCc--eEEEEEeEEEEEecCCC----EEEEeeCCccCCCCCceEEeecCEEEEccC--CCcCCCCCCC
Q 010217 111 SIVEPVRNIVRKKNV--DICFWEAECFKIDAENK----KVYCRSSQNTNLNGKEEFCMDYDYLVIAMG--ARANTFNTPG 182 (515)
Q Consensus 111 ~~~~~~~~~~~~~~i--~v~~~~~~v~~id~~~~----~v~~~~~~~~~~~~~~~~~~~~d~lviAtG--~~~~~~~ipG 182 (515)
++..++...++++++ .++ ++++|+.++.++. .|++.++ .++.||+||+||| +.|+.|++||
T Consensus 88 ei~~yl~~~~~~~~l~~~i~-~~~~V~~~~~~~~~~~w~V~~~~G----------~~~~ad~lV~AtG~~s~p~~p~ipG 156 (545)
T 3uox_A 88 EMLRYVNRAADAMDVRKHYR-FNTRVTAARYVENDRLWEVTLDNE----------EVVTCRFLISATGPLSASRMPDIKG 156 (545)
T ss_dssp HHHHHHHHHHHHHTCGGGEE-CSCCEEEEEEEGGGTEEEEEETTT----------EEEEEEEEEECCCSCBC---CCCTT
T ss_pred HHHHHHHHHHHHcCCcCcEE-ECCEEEEEEEeCCCCEEEEEECCC----------CEEEeCEEEECcCCCCCCcCCCCCC
Confidence 445556666777776 564 4778888876554 4444332 2789999999999 8899999999
Q ss_pred CCCcc-ccccChhHHHHHHHHHHHHHHhcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCc
Q 010217 183 VEENC-NFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSV 261 (515)
Q Consensus 183 ~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~ 261 (515)
.+... ..+++... ....+..+......+|+|+|||+|.+|+|+|..|.+. +.
T Consensus 157 ~~~f~g~~~h~~~~-------------~~~~~~~~~~~~~~~krV~VIG~G~tgve~a~~la~~--------------~~ 209 (545)
T 3uox_A 157 IDSFKGESFHSSRW-------------PTDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAAET--------------AK 209 (545)
T ss_dssp GGGCCSEEEEGGGC-------------CBCTTSCBSCCCCBTCEEEEECCSHHHHHHHHHHTTT--------------BS
T ss_pred ccccCCCeEEcccc-------------cccccccccccccCCCeEEEECCCccHHHHHHHHHhh--------------CC
Confidence 86311 00111000 0000000000013678999999999999999999875 57
Q ss_pred EEEEEeccccc
Q 010217 262 KITLLEAADHI 272 (515)
Q Consensus 262 ~Vtlv~~~~~~ 272 (515)
+|++++|.+.+
T Consensus 210 ~Vtv~~r~~~~ 220 (545)
T 3uox_A 210 ELYVFQRTPNW 220 (545)
T ss_dssp EEEEEESSCCC
T ss_pred EEEEEEcCCCc
Confidence 99999999873
No 92
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.90 E-value=1.7e-23 Score=221.38 Aligned_cols=174 Identities=17% Similarity=0.302 Sum_probs=113.7
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCc---cchhcc-----------------------Cccccc
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPL---LPSVTC-----------------------GTVEAR 110 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~---~~~~~~-----------------------g~~~~~ 110 (515)
..++|+|||||++|+++|..|++.|++|+|||+++.++++.. .+.... ......
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 94 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQP 94 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHH
Confidence 357999999999999999999999999999999887664321 111100 000111
Q ss_pred ccccchHHHHhhcC--ceEEEEEeEEEEEecCC--CEEEEeeCCccCCCCCceEEeecCEEEEccC--CCcCCCCCCCCC
Q 010217 111 SIVEPVRNIVRKKN--VDICFWEAECFKIDAEN--KKVYCRSSQNTNLNGKEEFCMDYDYLVIAMG--ARANTFNTPGVE 184 (515)
Q Consensus 111 ~~~~~~~~~~~~~~--i~v~~~~~~v~~id~~~--~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG--~~~~~~~ipG~~ 184 (515)
++..++....++++ ..++ .+++|+.++.++ +.+.+.... +. ++.||+||+||| +.|+.|.+||.+
T Consensus 95 ~i~~yl~~~~~~~~l~~~i~-~~~~V~~~~~~~~~~~w~V~~~~-----G~---~~~ad~vV~AtG~~s~p~~p~i~G~~ 165 (542)
T 1w4x_A 95 EILRYINFVADKFDLRSGIT-FHTTVTAAAFDEATNTWTVDTNH-----GD---RIRARYLIMASGQLSVPQLPNFPGLK 165 (542)
T ss_dssp HHHHHHHHHHHHTTGGGGEE-CSCCEEEEEEETTTTEEEEEETT-----CC---EEEEEEEEECCCSCCCCCCCCCTTGG
T ss_pred HHHHHHHHHHHHcCCCceEE-cCcEEEEEEEcCCCCeEEEEECC-----CC---EEEeCEEEECcCCCCCCCCCCCCCcc
Confidence 23333444555555 3564 477888887644 244443221 21 789999999999 568888999975
Q ss_pred Ccc-ccccChhHHHHHHHHHHHHHHhcCCCCCCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEE
Q 010217 185 ENC-NFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKI 263 (515)
Q Consensus 185 ~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~V 263 (515)
... ..+++. .++. +.....+|+|+|||+|.+|+|+|..+... +.+|
T Consensus 166 ~f~G~~~hs~-----------------~~~~--~~~~~~gk~V~VIG~G~sg~e~a~~l~~~--------------~~~v 212 (542)
T 1w4x_A 166 DFAGNLYHTG-----------------NWPH--EPVDFSGQRVGVIGTGSSGIQVSPQIAKQ--------------AAEL 212 (542)
T ss_dssp GCCSEEEEGG-----------------GCCS--SCCCCBTCEEEEECCSHHHHHHHHHHHHH--------------BSEE
T ss_pred cCCCceEECC-----------------CCCC--chhccCCCEEEEECCCccHHHHHHHHhhc--------------CceE
Confidence 311 001110 0000 00002578999999999999999999986 5799
Q ss_pred EEEeccccc
Q 010217 264 TLLEAADHI 272 (515)
Q Consensus 264 tlv~~~~~~ 272 (515)
+++.|.+.+
T Consensus 213 tv~~r~~~~ 221 (542)
T 1w4x_A 213 FVFQRTPHF 221 (542)
T ss_dssp EEEESSCCC
T ss_pred EEEEcCCcc
Confidence 999988765
No 93
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.83 E-value=4.1e-19 Score=185.73 Aligned_cols=282 Identities=13% Similarity=0.144 Sum_probs=168.0
Q ss_pred CCCCeEEEECCcHHHHHHHHhccC--------------CCCeEEEEcCCCCCccCC--ccchhccCc-------------
Q 010217 56 IKKKKVVVLGTGWAGTSFLKNLNN--------------PSYDVQVISPRNYFAFTP--LLPSVTCGT------------- 106 (515)
Q Consensus 56 ~~~~~VvIIGgG~AGlsaA~~L~~--------------~g~~V~vie~~~~~~~~~--~~~~~~~g~------------- 106 (515)
...+||||||+||+||++|..|.+ .+..+..+|+.+.++|++ ++++.....
T Consensus 37 ~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlvtl~~P~ 116 (501)
T 4b63_A 37 DELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLATLRDPR 116 (501)
T ss_dssp TSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSSTTTCTT
T ss_pred CCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhccccCCC
Confidence 445799999999999999988752 234678999999988875 233221110
Q ss_pred -------------------------ccccccccchHHHHhhcCceEEEEEeEEEEEecCC----------CEEEEeeCCc
Q 010217 107 -------------------------VEARSIVEPVRNIVRKKNVDICFWEAECFKIDAEN----------KKVYCRSSQN 151 (515)
Q Consensus 107 -------------------------~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~id~~~----------~~v~~~~~~~ 151 (515)
....++.++++....+++..++| +++|+.+.+.. -.|++.++.
T Consensus 117 s~~sf~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf-~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~- 194 (501)
T 4b63_A 117 SSFTFLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAY-GEEVVEVIPGKSDPSSSVVDFFTVRSRNVE- 194 (501)
T ss_dssp CTTSHHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEE-SEEEEEEEEECSSTTSSCBCEEEEEEEETT-
T ss_pred CccchHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceEc-ceEEEeeccccccccccccceEEEEEecCC-
Confidence 11123444555556666666765 77888886432 245555543
Q ss_pred cCCCCCceEEeecCEEEEccCCCcCCCCCCCCCCccccccChhHHHHHHHHHHHHHHhcCCCCCCHHHHhccceEEEECC
Q 010217 152 TNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGG 231 (515)
Q Consensus 152 ~~~~~~~~~~~~~d~lviAtG~~~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGg 231 (515)
.++..++.++.||+|||..|..|..++....++....+.+. .... . ....++|+|+|||+
T Consensus 195 ----~g~~~~~~ar~vVlatG~~P~iP~~~~~~g~v~Hss~y~~~------~~~~-~---------~~~~~gKrV~VVG~ 254 (501)
T 4b63_A 195 ----TGEISARRTRKVVIAIGGTAKMPSGLPQDPRIIHSSKYCTT------LPAL-L---------KDKSKPYNIAVLGS 254 (501)
T ss_dssp ----TCCEEEEEEEEEEECCCCEECCCTTSCCCTTEEEGGGHHHH------HHHH-S---------CCTTSCCEEEEECC
T ss_pred ----CceEEEEEeCEEEECcCCCCCCCCCCCCCcceeeccccccc------hhhc-c---------ccccCCcEEEEECC
Confidence 44456899999999999988877665544333332222211 1100 0 01137889999999
Q ss_pred ChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEecccccccc---------ccH-----------HHHHHHH------
Q 010217 232 GPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM---------FDK-----------RITAFAE------ 285 (515)
Q Consensus 232 G~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~~---------~~~-----------~~~~~~~------ 285 (515)
|.+|+|++..|.+.. .+.+|+++.|.+.+.+. +.+ .....+.
T Consensus 255 G~SA~ei~~~L~~~~------------~~~~v~~~~R~~~~~p~~~s~~~~~~f~p~~~~~f~~l~~~~r~~~~~~~~~~ 322 (501)
T 4b63_A 255 GQSAAEIFHDLQKRY------------PNSRTTLIMRDSAMRPSDDSPFVNEIFNPERVDKFYSQSAAERQRSLLADKAT 322 (501)
T ss_dssp SHHHHHHHHHHHHHS------------TTCEEEEECSSSSCCBCCCCTTGGGGGSTTHHHHHHTSCHHHHHHHHHHTGGG
T ss_pred cHHHHHHHHHHHhcC------------CCceEEEEeCCCccccccccccchhhcCHHHHHHHHhCCHHHHHHHHHHHHhh
Confidence 999999999998642 35799999998765331 111 1111110
Q ss_pred --------------HH-----hh-----cCCeEEEcCcEEEEEeCC----eEEEE-----------ecCCCceEEEecCe
Q 010217 286 --------------EK-----FS-----RDGIDVKLGSMVVKVTDK----EIFTK-----------VRGNGETSSMPYGM 326 (515)
Q Consensus 286 --------------~~-----l~-----~~gV~v~~~~~v~~i~~~----~v~~~-----------~~~~G~~~~i~~D~ 326 (515)
+. +. .....+..+..+..+... .+.+. ...+|++ +++|.
T Consensus 323 ~~~~v~~~li~~i~~~~y~~~~~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~v~~~dg~~--~~~D~ 400 (501)
T 4b63_A 323 NYSVVRLELIEEIYNDMYLQRVKNPDETQWQHRILPERKITRVEHHGPQSRMRIHLKSSKPESEGAANDVKET--LEVDA 400 (501)
T ss_dssp TSSCBCHHHHHHHHHHHHHHHHHCSCGGGCSSEEECSEEEEEEECCSSSSCEEEEEEESCC--------CCCE--EEESE
T ss_pred hhcccCHHHHHHHHHHHHhhccCCCcccccceeecCCcceeeeeecCCCCeEEEEeeeeEEeCCeeEeCCCeE--EECCE
Confidence 00 00 112345666666666421 12211 1235664 99999
Q ss_pred EEEccCCCCccchHHHHHHh---CCCCCCceeeCCCcccc-------CCCCEEEeccc
Q 010217 327 VVWSTGIAPHAIIKDFMKQV---GQTNRRALATDEWLRVE-------GSDSIYALGDC 374 (515)
Q Consensus 327 vi~a~G~~~~p~~~~l~~~~---~~~~~g~i~vd~~l~t~-------~~~~IyA~GD~ 374 (515)
||+|||+.+.... .|+..+ ..+.+|.+.|+..++.. ..++||+.|-|
T Consensus 401 VI~ATGy~~~~p~-~L~~~~~~l~~d~~g~~~v~rdy~~~~~~~~~~~~~~i~~qg~~ 457 (501)
T 4b63_A 401 LMVATGYNRNAHE-RLLSKVQHLRPTGQDQWKPHRDYRVEMDPSKVSSEAGIWLQGCN 457 (501)
T ss_dssp EEECCCEECCTHH-HHTGGGGGGSSTTCCSCCBCTTSBBCCCTTTBCTTCEEEECSCC
T ss_pred EEECcCCCCCCcc-hhcchhhhcCcCcCCCeeeCCCcEEeecCCccCCCceEEecCCC
Confidence 9999997544321 232222 22667788888776541 23569999843
No 94
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.77 E-value=5e-18 Score=152.82 Aligned_cols=143 Identities=20% Similarity=0.223 Sum_probs=114.3
Q ss_pred eEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccccc---------cc-----cHHHHHHHHHHhhc
Q 010217 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN---------MF-----DKRITAFAEEKFSR 290 (515)
Q Consensus 225 ~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~---------~~-----~~~~~~~~~~~l~~ 290 (515)
+|+|||||++|+++|..|.+. +.+|+++++.+.++. .+ ++++.+.+.+.+++
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~--------------g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 68 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARA--------------GLKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARR 68 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--------------TCCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHH
T ss_pred eEEEECCCHHHHHHHHHHHHC--------------CCcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHH
Confidence 799999999999999999985 689999999886652 23 47888999999999
Q ss_pred CCeEEEcCcEEEEEeC--CeEEEEecCCCceEEEecCeEEEccCCCCccchHHHHHHhCC--CCCCceeeCCCccccCCC
Q 010217 291 DGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ--TNRRALATDEWLRVEGSD 366 (515)
Q Consensus 291 ~gV~v~~~~~v~~i~~--~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~~~--~~~g~i~vd~~l~t~~~~ 366 (515)
.||+++++ ++++++. +.+.+. +.+| ++++|.||+|+|. .|+ +.+.+++ + +|.|.||+++|| +.|
T Consensus 69 ~gv~v~~~-~v~~i~~~~~~~~v~-~~~g---~i~ad~vI~A~G~--~~~---~~~~~g~~~~-~g~i~vd~~~~t-~~~ 136 (180)
T 2ywl_A 69 YGAEVRPG-VVKGVRDMGGVFEVE-TEEG---VEKAERLLLCTHK--DPT---LPSLLGLTRR-GAYIDTDEGGRT-SYP 136 (180)
T ss_dssp TTCEEEEC-CCCEEEECSSSEEEE-CSSC---EEEEEEEEECCTT--CCH---HHHHHTCCEE-TTEECCCTTCBC-SST
T ss_pred cCCEEEeC-EEEEEEEcCCEEEEE-ECCC---EEEECEEEECCCC--CCC---ccccCCCCcc-CceEEeCCCCCc-CCC
Confidence 99999999 9999874 344444 3556 3999999999994 563 3556666 5 888999999998 999
Q ss_pred CEEEeccccccCccchHHHHHHHHHhh
Q 010217 367 SIYALGDCATVNQRRVMEDIAAIFSKA 393 (515)
Q Consensus 367 ~IyA~GD~~~~~~~~~~~~~~~~~~~a 393 (515)
+|||+|||+..+.+....++.++..++
T Consensus 137 ~i~a~GD~~~~~~~~~~~A~~~g~~aa 163 (180)
T 2ywl_A 137 RVYAAGVARGKVPGHAIISAGDGAYVA 163 (180)
T ss_dssp TEEECGGGGTCCSCCHHHHHHHHHHHH
T ss_pred CEEEeecccCcchhhHHHHHHhHHHHH
Confidence 999999999987645555555554433
No 95
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.59 E-value=3.2e-17 Score=170.09 Aligned_cols=257 Identities=17% Similarity=0.175 Sum_probs=144.4
Q ss_pred eEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCc----------cc----h------------------------
Q 010217 60 KVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPL----------LP----S------------------------ 101 (515)
Q Consensus 60 ~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~----------~~----~------------------------ 101 (515)
||||||||+||++||..|++.|++|+|||+. ..++... .+ .
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~-~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~~ 79 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR-IDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVTS 79 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS-TTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHHH
Confidence 6999999999999999999999999999998 3333210 00 0
Q ss_pred -------------hcc--------Ccccc----------cccccchHHHHhhcCceEEEEEeEEEEEecCCCEE---EEe
Q 010217 102 -------------VTC--------GTVEA----------RSIVEPVRNIVRKKNVDICFWEAECFKIDAENKKV---YCR 147 (515)
Q Consensus 102 -------------~~~--------g~~~~----------~~~~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v---~~~ 147 (515)
+.. +...+ ..+...+.+.+++.++++ +.+..| .+..+++.+ .+.
T Consensus 80 ~~~~~i~~l~~~Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i-~~~~~v-~l~~~~~~v~Gv~v~ 157 (472)
T 2e5v_A 80 EAKNVIETFESWGFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAREEGIPI-IEDRLV-EIRVKDGKVTGFVTE 157 (472)
T ss_dssp HHHHHHHHHHHTTCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHHTTCCE-ECCCEE-EEEEETTEEEEEEET
T ss_pred HHHHHHHHHHHcCCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHHhCCCEE-EECcEE-EEEEeCCEEEEEEEE
Confidence 000 00000 012223444456678887 456678 887665544 332
Q ss_pred eCCccCCCCCceEEeecCEEEEccCCCcCCCCCCCCCCccccccChhHHHHHHHHHHHHHHhcCCCCCCHHHHhccceEE
Q 010217 148 SSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFV 227 (515)
Q Consensus 148 ~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv 227 (515)
+. ++ ++.+|.||+|||+.+..++++.... ... .+...+..+. ......+..+ +....++
T Consensus 158 ~~------~g---~~~a~~VVlAtGg~~~~~~~~~~~~-~~t----Gdgi~~a~~a--Ga~~~d~e~~-----q~~p~~~ 216 (472)
T 2e5v_A 158 KR------GL---VEDVDKLVLATGGYSYLYEYSSTQS-TNI----GDGMAIAFKA--GTILADMEFV-----QFHPTVT 216 (472)
T ss_dssp TT------EE---ECCCSEEEECCCCCGGGSSSBSSCT-TCS----CHHHHHHHHT--TCCEECTTCE-----EEEEEEE
T ss_pred eC------CC---eEEeeeEEECCCCCcccCccccCCC-CCc----hHHHHHHHHc--CCCEeCCcce-----EEEeEEE
Confidence 21 11 5779999999999886655432111 000 1111110000 0000111111 0112445
Q ss_pred EECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccccccccHHH--------HHHHHHHhhcCCeEEEcCc
Q 010217 228 IVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRI--------TAFAEEKFSRDGIDVKLGS 299 (515)
Q Consensus 228 VvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~~~~~~~--------~~~~~~~l~~~gV~v~~~~ 299 (515)
++|+| +++++..+... +..+ +..+++++++.+++.. ...+.+.+++.|. ++++.
T Consensus 217 ~~ggg--~~~~ae~~~~~--------------G~~~-v~~~g~rf~~~~~~~~el~~rd~v~~~i~~~~~~~~~-v~ld~ 278 (472)
T 2e5v_A 217 SLDGE--VFLLTETLRGE--------------GAQI-INENGERFLFNYDKRGELAPRDILSRAIYIEMLKGHK-VFIDL 278 (472)
T ss_dssp CGGGC--CEECCTHHHHT--------------TCEE-EETTCCCGGGGTCTTGGGSCHHHHHHHHHHHHHHTCC-EEEEC
T ss_pred ccCCC--ceeeehhhcCC--------------ceEE-ECCCCCCCCccCCcccCcCchhHHHHHHHHHHHhCCc-EEEec
Confidence 56766 88888777764 4566 7788888887655432 5556666666553 22211
Q ss_pred EEEEEeCCeEEEEecCCCceEEEe-cCeEEEccCCCCccchHHHHHHh--CCCCCCceeeCCCccccCCCCEEEeccccc
Q 010217 300 MVVKVTDKEIFTKVRGNGETSSMP-YGMVVWSTGIAPHAIIKDFMKQV--GQTNRRALATDEWLRVEGSDSIYALGDCAT 376 (515)
Q Consensus 300 ~v~~i~~~~v~~~~~~~G~~~~i~-~D~vi~a~G~~~~p~~~~l~~~~--~~~~~g~i~vd~~l~t~~~~~IyA~GD~~~ 376 (515)
. .+. . . .+ .++ .|.++++.|+ .|+ .+++-. .....|+|.||+++|| ++|||||+|||+.
T Consensus 279 ~--~~~--~-----~--~~--~~~~~~~~~~~~G~--dp~--~~i~v~p~~~~~~GGI~vd~~~~t-~ipgLyAaGd~a~ 340 (472)
T 2e5v_A 279 S--KIE--D-----F--ER--KFPVVAKYLARHGH--NYK--VKIPIFPAAHFVDGGIRVNIRGES-NIVNLYAIGEVSD 340 (472)
T ss_dssp T--TCT--T-----H--HH--HCHHHHHHHHHTTC--CTT--SCEECEEEEEEESCEEECCTTCBC-SSBTEEECGGGEE
T ss_pred c--chH--H-----H--HH--HhHHHHHHHHHhCc--Ccc--cceEeehhhceeCCCeEECCCCcc-ccCCEEecchhcc
Confidence 0 000 0 0 01 144 4667777884 554 222111 1234799999999998 9999999999987
No 96
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.50 E-value=1.4e-16 Score=157.57 Aligned_cols=227 Identities=12% Similarity=0.050 Sum_probs=132.1
Q ss_pred CCeEEEECCcHHHHHHHHhcc--CCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEE
Q 010217 58 KKKVVVLGTGWAGTSFLKNLN--NPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECF 135 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~--~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~ 135 (515)
.+||+|||||||||+||++|+ +.|++|+|||+++..|+......+. .+...+......++.+.|+++.. .
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~~~~---~~~~~l~~~~~~~~~e~Gv~~~~-~---- 136 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQL---FSAMVMRKPAHLFLQELEIPYED-E---- 136 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCSTT---CCCEEEETTTHHHHHHTTCCCEE-C----
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeCCcc---CCHHHHHHHHHHHHHHcCCEEEE-C----
Confidence 469999999999999999996 6799999999999888865443221 11223334456777888876421 1
Q ss_pred EEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCCCCCCCCc-cccccChhHHHHHHHHHHHHHHhcCCCC
Q 010217 136 KIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEEN-CNFLKEVEDAQRIRRNVIESFEKASLPN 214 (515)
Q Consensus 136 ~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ipG~~~~-~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 214 (515)
.. .....+.++++++..+..+.++|.... ...... +..+.
T Consensus 137 -----~~-----------------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-------------~~~~~---- 177 (326)
T 3fpz_A 137 -----GD-----------------YVVVKHAALFISTVLSKVLQLPNVKLFNATCVED-------------LVTRP---- 177 (326)
T ss_dssp -----SS-----------------EEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEE-------------EEEES----
T ss_pred -----Cc-----------------ceecceeEEEEcchhhhccccccceeecccccce-------------eeccC----
Confidence 11 133344556667766666777775411 000000 00000
Q ss_pred CCHHHHhccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccccccccHHHHHHHHHHhhcCCeE
Q 010217 215 LSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGID 294 (515)
Q Consensus 215 ~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~ 294 (515)
.....+++++|||+|.++++.|..+..+ +.+++++.+......... +....
T Consensus 178 ---~~~~~~~~v~viggg~~av~~a~~~~~~--------------~~~v~i~~~~~~~~~~~~----------~~~~~-- 228 (326)
T 3fpz_A 178 ---PTEKGEVTVAGVVTNWTLVTQAHGTQCA--------------MDPNVIELAGYKNDGTRD----------LSQKH-- 228 (326)
T ss_dssp ---SCSSSSCEEEEEEEEEHHHHTCTTSSSC--------------CCCEEEEESCBCTTSSBC----------TTSCC--
T ss_pred ---CcccCCCEEEEEccCceeeehhhhhhhc--------------cCcEEEEeeccccccccc----------ceeec--
Confidence 0012567999999999999999877664 567888776654322100 00000
Q ss_pred EEcCcEEEEEeCCeEEEEecCCCceEEEecCeEEEccCCCCccchHHHHHHhCCCCCCceeeCCCccccCCCCEEEeccc
Q 010217 295 VKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQTNRRALATDEWLRVEGSDSIYALGDC 374 (515)
Q Consensus 295 v~~~~~v~~i~~~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~~~~~~g~i~vd~~l~t~~~~~IyA~GD~ 374 (515)
..+....+...... ..+....+++|.++.+.|+ .+....+. .+.|++|..++| ++|+|||+||+
T Consensus 229 ----~~~~~~~g~~~~~~--~~~~~~~~~~~~~~~~~g~--~~~~~~~~-------e~~iv~~~~~~t-~vpGv~aaGDa 292 (326)
T 3fpz_A 229 ----GVILSTTGHDGPFG--AFCAKRIVDIDQNQKLGGM--KGLDMNHA-------EHDVVIHSGAYA-GVDNMYFAGME 292 (326)
T ss_dssp ----CEEEECCCSCSSSC--SHHHHHHHHHCTTCCCCCC--CCBCHHHH-------HHHHHHHCEECT-TSBTEEECTHH
T ss_pred ----ceEEEEecceeeEe--ecceeEEEecCceeeecce--eccccccc-------CCeEEECCCeEE-CCCCEEEEchH
Confidence 01111111110000 0011123667777777774 33322222 245777888898 99999999999
Q ss_pred cc
Q 010217 375 AT 376 (515)
Q Consensus 375 ~~ 376 (515)
++
T Consensus 293 a~ 294 (326)
T 3fpz_A 293 VA 294 (326)
T ss_dssp HH
T ss_pred hc
Confidence 75
No 97
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.40 E-value=8.6e-14 Score=141.12 Aligned_cols=109 Identities=17% Similarity=0.187 Sum_probs=72.2
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCcc--------CCccch-------hcc------------------
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAF--------TPLLPS-------VTC------------------ 104 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~--------~~~~~~-------~~~------------------ 104 (515)
.+||+|||||+||++||..|++.|.+|+|+|+.+..+. ...+.. +..
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 83 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWDF 83 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHHH
Confidence 47999999999999999999999999999999876522 110000 000
Q ss_pred -------Cc---------c----cccccccchHHHHhhcCceEEEEEeEEEEEecC----CCEEEEeeCCccCCCCCceE
Q 010217 105 -------GT---------V----EARSIVEPVRNIVRKKNVDICFWEAECFKIDAE----NKKVYCRSSQNTNLNGKEEF 160 (515)
Q Consensus 105 -------g~---------~----~~~~~~~~~~~~~~~~~i~v~~~~~~v~~id~~----~~~v~~~~~~~~~~~~~~~~ 160 (515)
|. . ....+...+.+.+++.|+++. .+++|+.+..+ ++.+.+... ++
T Consensus 84 ~~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~-~~~~v~~i~~~~~g~~~~~~v~~~------~g--- 153 (401)
T 2gqf_A 84 ISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKIL-LRSEVSQVERIQNDEKVRFVLQVN------ST--- 153 (401)
T ss_dssp HHHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEEE-CSCCEEEEEECCSCSSCCEEEEET------TE---
T ss_pred HHHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEEE-eCCEEEEEEcccCcCCCeEEEEEC------CC---
Confidence 00 0 112233345566677788873 57788888754 344555432 11
Q ss_pred EeecCEEEEccCCCcC
Q 010217 161 CMDYDYLVIAMGARAN 176 (515)
Q Consensus 161 ~~~~d~lviAtG~~~~ 176 (515)
++.+|+||+|||+.+.
T Consensus 154 ~i~ad~VVlAtG~~s~ 169 (401)
T 2gqf_A 154 QWQCKNLIVATGGLSM 169 (401)
T ss_dssp EEEESEEEECCCCSSC
T ss_pred EEECCEEEECCCCccC
Confidence 6899999999999873
No 98
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.32 E-value=2.2e-11 Score=113.92 Aligned_cols=92 Identities=20% Similarity=0.143 Sum_probs=70.3
Q ss_pred eEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEecccc-----------------ccccc-------cHHH
Q 010217 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADH-----------------ILNMF-------DKRI 280 (515)
Q Consensus 225 ~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~-----------------~l~~~-------~~~~ 280 (515)
+|+|||||++|+++|..|++. +.+|+++++... ++..+ ...+
T Consensus 5 dVvVVGgG~aGl~aA~~la~~--------------g~~v~lie~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~ 70 (232)
T 2cul_A 5 QVLIVGAGFSGAETAFWLAQK--------------GVRVGLLTQSLDAVMMPFLPPKPPFPPGSLLERAYDPKDERVWAF 70 (232)
T ss_dssp SEEEECCSHHHHHHHHHHHHT--------------TCCEEEEESCGGGTTCCSSCCCSCCCTTCHHHHHCCTTCCCHHHH
T ss_pred CEEEECcCHHHHHHHHHHHHC--------------CCCEEEEecCCCcCCcccCccccccchhhHHhhhccCCCCCHHHH
Confidence 799999999999999999985 689999998721 11111 1356
Q ss_pred HHHHHHHhhcC-CeEEEcCcEEEEEe--CCeEEEEecCCCceEEEecCeEEEccCC
Q 010217 281 TAFAEEKFSRD-GIDVKLGSMVVKVT--DKEIFTKVRGNGETSSMPYGMVVWSTGI 333 (515)
Q Consensus 281 ~~~~~~~l~~~-gV~v~~~~~v~~i~--~~~v~~~~~~~G~~~~i~~D~vi~a~G~ 333 (515)
.+.+.+.+++. ||+++ +++|+++. ++.+..+.+.+|++ +++|.||+|+|.
T Consensus 71 ~~~l~~~~~~~~gv~i~-~~~v~~i~~~~~~v~~v~~~~g~~--i~a~~VV~A~G~ 123 (232)
T 2cul_A 71 HARAKYLLEGLRPLHLF-QATATGLLLEGNRVVGVRTWEGPP--ARGEKVVLAVGS 123 (232)
T ss_dssp HHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETTSCC--EECSEEEECCTT
T ss_pred HHHHHHHHHcCCCcEEE-EeEEEEEEEeCCEEEEEEECCCCE--EECCEEEECCCC
Confidence 67788888886 99999 56898885 34554444466764 999999999996
No 99
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.18 E-value=1e-10 Score=119.89 Aligned_cols=93 Identities=12% Similarity=0.138 Sum_probs=65.1
Q ss_pred HHHHHHHHHhhcCCeEEEcCcEEEEEeC--CeEEEEecCCCceEEEecCeEEEccCCC------CccchHHH-HHHhCC-
Q 010217 279 RITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGIA------PHAIIKDF-MKQVGQ- 348 (515)
Q Consensus 279 ~~~~~~~~~l~~~gV~v~~~~~v~~i~~--~~v~~~~~~~G~~~~i~~D~vi~a~G~~------~~p~~~~l-~~~~~~- 348 (515)
.+...+...+++.| +|+++++|++|+. +++.+.. .+|++ +.||.||+|+|.. ..|++..+ .+.++.
T Consensus 205 g~~~l~~~~~~~~g-~i~~~~~V~~i~~~~~~v~v~~-~~g~~--~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~~~~~~ 280 (431)
T 3k7m_X 205 GSADLVDAMSQEIP-EIRLQTVVTGIDQSGDVVNVTV-KDGHA--FQAHSVIVATPMNTWRRIVFTPALPERRRSVIEEG 280 (431)
T ss_dssp CTHHHHHHHHTTCS-CEESSCCEEEEECSSSSEEEEE-TTSCC--EEEEEEEECSCGGGGGGSEEESCCCHHHHHHHHHC
T ss_pred cHHHHHHHHHhhCC-ceEeCCEEEEEEEcCCeEEEEE-CCCCE--EEeCEEEEecCcchHhheeeCCCCCHHHHHHHHhC
Confidence 34555666677778 9999999999974 4566543 56764 8999999999921 13444332 233332
Q ss_pred CCCCceeeCCCccccCCCCEEEeccccc
Q 010217 349 TNRRALATDEWLRVEGSDSIYALGDCAT 376 (515)
Q Consensus 349 ~~~g~i~vd~~l~t~~~~~IyA~GD~~~ 376 (515)
.....+.|+..+++ +.++||+.||+..
T Consensus 281 ~~~~~~kv~~~~~~-~~~~i~~~~d~~~ 307 (431)
T 3k7m_X 281 HGGQGLKILIHVRG-AEAGIECVGDGIF 307 (431)
T ss_dssp CCCCEEEEEEEEES-CCTTEEEEBSSSS
T ss_pred CCcceEEEEEEECC-CCcCceEcCCCCE
Confidence 33456999999998 7899999999854
No 100
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.03 E-value=2.5e-10 Score=120.40 Aligned_cols=117 Identities=15% Similarity=0.185 Sum_probs=74.5
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCC-CCccCCccchh--------------ccCc----------------
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN-YFAFTPLLPSV--------------TCGT---------------- 106 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~-~~~~~~~~~~~--------------~~g~---------------- 106 (515)
.+||||||||+||++||..|++.|.+|+|||++. .++.....+.. ..+.
T Consensus 28 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~l~ 107 (651)
T 3ces_A 28 PFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRILN 107 (651)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEEES
T ss_pred cCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhhhh
Confidence 5799999999999999999999999999999874 23221111000 0000
Q ss_pred -------------ccccccccchHHHHhh-cCceEEEEEeEEEEEecCCCEE-EEeeCCccCCCCCceEEeecCEEEEcc
Q 010217 107 -------------VEARSIVEPVRNIVRK-KNVDICFWEAECFKIDAENKKV-YCRSSQNTNLNGKEEFCMDYDYLVIAM 171 (515)
Q Consensus 107 -------------~~~~~~~~~~~~~~~~-~~i~v~~~~~~v~~id~~~~~v-~~~~~~~~~~~~~~~~~~~~d~lviAt 171 (515)
.+...+...+.+.+.+ .|+++ ++++|+.+..+++.| .+... ++ ..+.+|.||+||
T Consensus 108 ~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I--~~~~V~~L~~e~g~V~GV~t~------dG--~~I~Ad~VVLAT 177 (651)
T 3ces_A 108 ASKGPAVRATRAQADRVLYRQAVRTALENQPNLMI--FQQAVEDLIVENDRVVGAVTQ------MG--LKFRAKAVVLTV 177 (651)
T ss_dssp TTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEE--EECCEEEEEESSSBEEEEEET------TS--EEEEEEEEEECC
T ss_pred cccCcccccchhhCCHHHHHHHHHHHHHhCCCCEE--EEEEEEEEEecCCEEEEEEEC------CC--CEEECCEEEEcC
Confidence 0000122234455555 57664 578999997655433 23221 11 278999999999
Q ss_pred CCCcCCCCCCCCC
Q 010217 172 GARANTFNTPGVE 184 (515)
Q Consensus 172 G~~~~~~~ipG~~ 184 (515)
|+.+..+.++|..
T Consensus 178 Gt~s~~~~i~G~~ 190 (651)
T 3ces_A 178 GTFLDGKIHIGLD 190 (651)
T ss_dssp STTTCCEEECC--
T ss_pred CCCccCccccCcc
Confidence 9998877777753
No 101
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.02 E-value=3.9e-10 Score=100.80 Aligned_cols=107 Identities=11% Similarity=0.082 Sum_probs=74.7
Q ss_pred CeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccC-Ccc---chhccCcccccccccchHHHHhhcCceEEEEEeEE
Q 010217 59 KKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFT-PLL---PSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAEC 134 (515)
Q Consensus 59 ~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~-~~~---~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v 134 (515)
++|+|||||++|+++|..|++.|.+|+|||+.+..... ..+ +..+ ......++...+.+.+++.++++. .+ +|
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~gv~v~-~~-~v 78 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVSRVPNYPGLL-DEPSGEELLRRLEAHARRYGAEVR-PG-VV 78 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCSCCCCSTTCT-TCCCHHHHHHHHHHHHHHTTCEEE-EC-CC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCchhhhccCCCc-CCCCHHHHHHHHHHHHHHcCCEEE-eC-EE
Confidence 68999999999999999999999999999988633211 000 1110 111233556667778888898874 34 88
Q ss_pred EEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCC
Q 010217 135 FKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (515)
Q Consensus 135 ~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~ 177 (515)
+.++.+++.+.+... ++ ++.+|.||+|+|..|+.
T Consensus 79 ~~i~~~~~~~~v~~~------~g---~i~ad~vI~A~G~~~~~ 112 (180)
T 2ywl_A 79 KGVRDMGGVFEVETE------EG---VEKAERLLLCTHKDPTL 112 (180)
T ss_dssp CEEEECSSSEEEECS------SC---EEEEEEEEECCTTCCHH
T ss_pred EEEEEcCCEEEEEEC------CC---EEEECEEEECCCCCCCc
Confidence 888875554444432 22 78999999999998743
No 102
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.92 E-value=1.3e-09 Score=101.87 Aligned_cols=116 Identities=16% Similarity=0.209 Sum_probs=74.0
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhc---cCcc----------cccccccchHHHHhhc-
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVT---CGTV----------EARSIVEPVRNIVRKK- 123 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~---~g~~----------~~~~~~~~~~~~~~~~- 123 (515)
.++|+|||||++|+++|..|++.|.+|+|||+.....+.+..+... .+.. ....+...+.+.+++.
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~l~~~~~~~~ 82 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPFLPPKPPFPPGSLLERAYDPKDERVWAFHARAKYLLEGLR 82 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCCCSCCCTTCHHHHHCCTTCCCHHHHHHHHHHHHHTCT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCcccCccccccchhhHHhhhccCCCCCHHHHHHHHHHHHHcCC
Confidence 4799999999999999999999999999999873222111111110 0000 1113334455666665
Q ss_pred CceEEEEEeEEEEEecCCCEE-EEeeCCccCCCCCceEEeecCEEEEccCCCcCCCCCCCC
Q 010217 124 NVDICFWEAECFKIDAENKKV-YCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGV 183 (515)
Q Consensus 124 ~i~v~~~~~~v~~id~~~~~v-~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ipG~ 183 (515)
++++ .+++|+.+..++..+ .+... ++. ++.+|+||+|+|........+|.
T Consensus 83 gv~i--~~~~v~~i~~~~~~v~~v~~~------~g~--~i~a~~VV~A~G~~s~~~~~~G~ 133 (232)
T 2cul_A 83 PLHL--FQATATGLLLEGNRVVGVRTW------EGP--PARGEKVVLAVGSFLGARLFLGG 133 (232)
T ss_dssp TEEE--EECCEEEEEEETTEEEEEEET------TSC--CEECSEEEECCTTCSSCEEEETT
T ss_pred CcEE--EEeEEEEEEEeCCEEEEEEEC------CCC--EEECCEEEECCCCChhhceecCC
Confidence 7664 467899988765543 23221 111 68999999999997655444553
No 103
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.90 E-value=7.5e-09 Score=99.67 Aligned_cols=137 Identities=17% Similarity=0.162 Sum_probs=89.5
Q ss_pred ceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEecccccccc----------------------------
Q 010217 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM---------------------------- 275 (515)
Q Consensus 224 ~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~~---------------------------- 275 (515)
..|+|||||++|+.+|..|++. ++.+|+++++.+.+...
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~-------------~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~ 106 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKN-------------PNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAY 106 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTS-------------TTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCC
T ss_pred cCEEEECccHHHHHHHHHHHHc-------------CCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCc
Confidence 3899999999999999999873 16899999988754210
Q ss_pred ----------ccHHHHHHHHHHhhc-CCeEEEcCcEEEEEe--CCeEEEEec-------C--C---CceEEEecCeEEEc
Q 010217 276 ----------FDKRITAFAEEKFSR-DGIDVKLGSMVVKVT--DKEIFTKVR-------G--N---GETSSMPYGMVVWS 330 (515)
Q Consensus 276 ----------~~~~~~~~~~~~l~~-~gV~v~~~~~v~~i~--~~~v~~~~~-------~--~---G~~~~i~~D~vi~a 330 (515)
....+...+.+.+.+ .||+++++++|+++. ++.+..+.. . + |+..++++|.||+|
T Consensus 107 ~~~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~A 186 (284)
T 1rp0_A 107 DEQDTYVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSS 186 (284)
T ss_dssp EECSSEEEESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEEC
T ss_pred ccCCCEEEecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEEC
Confidence 123444455566654 799999999999996 343322211 1 2 33346999999999
Q ss_pred cCCCCccchH----HHHHHhC----CCCCCceeeCC-------CccccCCCCEEEeccccc
Q 010217 331 TGIAPHAIIK----DFMKQVG----QTNRRALATDE-------WLRVEGSDSIYALGDCAT 376 (515)
Q Consensus 331 ~G~~~~p~~~----~l~~~~~----~~~~g~i~vd~-------~l~t~~~~~IyA~GD~~~ 376 (515)
+|. .+.+. .++..++ +.....+.+|. +.++ +.|++|++||++.
T Consensus 187 tG~--~s~~~~~~~~~~~~~g~~~~v~~~~g~~~~~~~~~~v~~~~~-~~p~i~a~G~~~~ 244 (284)
T 1rp0_A 187 CGH--DGPFGATGVKRLKSIGMIDHVPGMKALDMNTAEDAIVRLTRE-VVPGMIVTGMEVA 244 (284)
T ss_dssp CCS--SSTTTTHHHHHHHHTTSSSCCCCCEEECHHHHHHHHHHHCEE-EETTEEECTHHHH
T ss_pred CCC--chHHHHHHHHHhhhccCCCCcCCcCCchhhhhhHHHhhcccc-ccCCEEEEeeehh
Confidence 994 33332 3333333 22233344432 3344 6799999999874
No 104
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.88 E-value=1.7e-09 Score=113.59 Aligned_cols=115 Identities=17% Similarity=0.182 Sum_probs=75.6
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCC-CCccCCccchh--------------ccCc----------------
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN-YFAFTPLLPSV--------------TCGT---------------- 106 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~-~~~~~~~~~~~--------------~~g~---------------- 106 (515)
.+||+|||||+||++||..|++.|.+|+|||++. .++..+..+.. ..+.
T Consensus 27 ~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~l~ 106 (637)
T 2zxi_A 27 EFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKMLN 106 (637)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEEES
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccceeecc
Confidence 5899999999999999999999999999999874 23321111100 0000
Q ss_pred -------------ccccccccchHHHHhh-cCceEEEEEeEEEEEecCCCE---EEEeeCCccCCCCCceEEeecCEEEE
Q 010217 107 -------------VEARSIVEPVRNIVRK-KNVDICFWEAECFKIDAENKK---VYCRSSQNTNLNGKEEFCMDYDYLVI 169 (515)
Q Consensus 107 -------------~~~~~~~~~~~~~~~~-~~i~v~~~~~~v~~id~~~~~---v~~~~~~~~~~~~~~~~~~~~d~lvi 169 (515)
.+...+...+.+.+.+ .++++ ++++|+.+..+++. |.+.++ ..+.+|.||+
T Consensus 107 ~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI--~~~~Vt~L~~e~g~V~GV~t~dG----------~~i~AdaVVL 174 (637)
T 2zxi_A 107 TRKGKAVQSPRAQADKKRYREYMKKVCENQENLYI--KQEEVVDIIVKNNQVVGVRTNLG----------VEYKTKAVVV 174 (637)
T ss_dssp TTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEE--EESCEEEEEESSSBEEEEEETTS----------CEEECSEEEE
T ss_pred cccCccccchhhhCCHHHHHHHHHHHHHhCCCCEE--EEeEEEEEEecCCEEEEEEECCC----------cEEEeCEEEE
Confidence 0001122334455555 47664 57899998765553 333322 1799999999
Q ss_pred ccCCCcCCCCCCCCC
Q 010217 170 AMGARANTFNTPGVE 184 (515)
Q Consensus 170 AtG~~~~~~~ipG~~ 184 (515)
|||+.++.+.++|..
T Consensus 175 ATG~~s~~~~~~G~~ 189 (637)
T 2zxi_A 175 TTGTFLNGVIYIGDK 189 (637)
T ss_dssp CCTTCBTCEEEETTE
T ss_pred ccCCCccCceeccce
Confidence 999998877777753
No 105
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.87 E-value=1.9e-09 Score=109.48 Aligned_cols=110 Identities=19% Similarity=0.228 Sum_probs=73.7
Q ss_pred CCCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCC--------ccch-------hcc----------------
Q 010217 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTP--------LLPS-------VTC---------------- 104 (515)
Q Consensus 56 ~~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~--------~~~~-------~~~---------------- 104 (515)
...+||+|||||+||++||..|++.|++|+|+|+.+..+... .+.. +..
T Consensus 25 ~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~ 104 (417)
T 3v76_A 25 AEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQ 104 (417)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHH
Confidence 346799999999999999999999999999999987654211 0000 000
Q ss_pred ------------------Cc----ccccccccchHHHHhhcCceEEEEEeEEEEEecCCCEEEEeeCCccCCCCCceEEe
Q 010217 105 ------------------GT----VEARSIVEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCM 162 (515)
Q Consensus 105 ------------------g~----~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~ 162 (515)
+. .....+...+.+.+.+.|++++ .+++|+.+..++..+.+.... + .+
T Consensus 105 ~~~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~-~~~~V~~i~~~~~~~~V~~~~------g---~i 174 (417)
T 3v76_A 105 DFVALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLR-LETSIGEVERTASGFRVTTSA------G---TV 174 (417)
T ss_dssp HHHHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEE-CSCCEEEEEEETTEEEEEETT------E---EE
T ss_pred HHHHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEE-ECCEEEEEEEeCCEEEEEECC------c---EE
Confidence 00 0001233345555667788874 577899988776666665432 1 78
Q ss_pred ecCEEEEccCCCc
Q 010217 163 DYDYLVIAMGARA 175 (515)
Q Consensus 163 ~~d~lviAtG~~~ 175 (515)
.+|+||+|+|..+
T Consensus 175 ~ad~VIlAtG~~S 187 (417)
T 3v76_A 175 DAASLVVASGGKS 187 (417)
T ss_dssp EESEEEECCCCSS
T ss_pred EeeEEEECCCCcc
Confidence 9999999999875
No 106
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.86 E-value=7.5e-09 Score=99.67 Aligned_cols=119 Identities=17% Similarity=0.167 Sum_probs=71.7
Q ss_pred CCeEEEECCcHHHHHHHHhccCC-CCeEEEEcCCCCCccCCccchhc----------------cCcc-----------cc
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNP-SYDVQVISPRNYFAFTPLLPSVT----------------CGTV-----------EA 109 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~-g~~V~vie~~~~~~~~~~~~~~~----------------~g~~-----------~~ 109 (515)
.+||+|||||++|+++|..|++. |.+|+|||+.+..++........ .|.. ..
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 118 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHA 118 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCH
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEEecCH
Confidence 46999999999999999999986 99999999987665321110000 0000 11
Q ss_pred cccccchHHHHhh-cCceEEEEEeEEEEEecCCCEE---EEeeC----CccCCCCCceEEeecCEEEEccCCCcCC
Q 010217 110 RSIVEPVRNIVRK-KNVDICFWEAECFKIDAENKKV---YCRSS----QNTNLNGKEEFCMDYDYLVIAMGARANT 177 (515)
Q Consensus 110 ~~~~~~~~~~~~~-~~i~v~~~~~~v~~id~~~~~v---~~~~~----~~~~~~~~~~~~~~~d~lviAtG~~~~~ 177 (515)
..+...+.+.+.+ .|+++ +.+++|+.+..+++.+ .+... ....-..++...+.+|.||+|+|..+..
T Consensus 119 ~~~~~~l~~~~~~~~gv~i-~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~ 193 (284)
T 1rp0_A 119 ALFTSTIMSKLLARPNVKL-FNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPF 193 (284)
T ss_dssp HHHHHHHHHHHHTSTTEEE-EETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTT
T ss_pred HHHHHHHHHHHHhcCCCEE-EcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHH
Confidence 1122223333433 57776 4577899998665543 33210 0000001223479999999999987643
No 107
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.83 E-value=5.2e-09 Score=105.20 Aligned_cols=107 Identities=20% Similarity=0.275 Sum_probs=71.6
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCC----ccc-------------hhc-c------------C--
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTP----LLP-------------SVT-C------------G-- 105 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~----~~~-------------~~~-~------------g-- 105 (515)
.++|+|||||++|+++|..|++.|++|+|||+.+...... +.+ ... . +
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~~ 90 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHNKS 90 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEETTEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeCCce
Confidence 5799999999999999999999999999999887653211 000 000 0 0
Q ss_pred ------------cccccccccchHHHHhhcCceEEEEEeEEEEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCC
Q 010217 106 ------------TVEARSIVEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGA 173 (515)
Q Consensus 106 ------------~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~ 173 (515)
......+...+.+.+.+.|++++ .+.+|+.++.++ .|++.++. ++.+|.||.|+|.
T Consensus 91 ~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~-~~~~v~~i~~~~-~v~~~~g~----------~~~ad~vV~AdG~ 158 (379)
T 3alj_A 91 VSKETFNGLPWRIMTRSHLHDALVNRARALGVDIS-VNSEAVAADPVG-RLTLQTGE----------VLEADLIVGADGV 158 (379)
T ss_dssp EEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEE-SSCCEEEEETTT-EEEETTSC----------EEECSEEEECCCT
T ss_pred eeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEE-eCCEEEEEEeCC-EEEECCCC----------EEEcCEEEECCCc
Confidence 00001122334555666788874 467888888744 66654322 7999999999998
Q ss_pred CcC
Q 010217 174 RAN 176 (515)
Q Consensus 174 ~~~ 176 (515)
...
T Consensus 159 ~s~ 161 (379)
T 3alj_A 159 GSK 161 (379)
T ss_dssp TCH
T ss_pred cHH
Confidence 653
No 108
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.82 E-value=4.7e-09 Score=109.33 Aligned_cols=121 Identities=16% Similarity=0.195 Sum_probs=78.5
Q ss_pred CCCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCc---cchh-----ccCc--------------ccccccc
Q 010217 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPL---LPSV-----TCGT--------------VEARSIV 113 (515)
Q Consensus 56 ~~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~---~~~~-----~~g~--------------~~~~~~~ 113 (515)
...++|+|||||++|+++|..|++.|++|+|||+.+.++.... .+.. ..|. .....+.
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~ 169 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQ 169 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHH
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHH
Confidence 4568999999999999999999999999999999877653211 1100 0000 0112333
Q ss_pred cchHHHHhhcCceEEEEEeEEEEEecC---C--CEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCCCCC
Q 010217 114 EPVRNIVRKKNVDICFWEAECFKIDAE---N--KKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPG 182 (515)
Q Consensus 114 ~~~~~~~~~~~i~v~~~~~~v~~id~~---~--~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ipG 182 (515)
..+.+.+.+.|+++. .+++|+.+..+ + ..|.+.+.. +++..++.+|+||+|+|..+......+
T Consensus 170 ~~L~~~~~~~gv~v~-~~~~v~~i~~~~~~~~~~~v~~~~~~-----~g~~~~i~ad~VV~A~G~~S~~r~~~~ 237 (497)
T 2bry_A 170 LLLLKVALLLGVEIH-WGVKFTGLQPPPRKGSGWRAQLQPNP-----PAQLASYEFDVLISAAGGKFVPEGFTI 237 (497)
T ss_dssp HHHHHHHHHTTCEEE-ESCEEEEEECCCSTTCCBEEEEESCC-----CHHHHTCCBSEEEECCCTTCCCTTCEE
T ss_pred HHHHHHHHhCCCEEE-eCCEEEEEEEecCCCCEEEEEEEECC-----CCCEEEEEcCEEEECCCCCcccccccc
Confidence 345566667788874 57889998763 2 245553210 111126899999999999876554433
No 109
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.81 E-value=2.3e-09 Score=113.10 Aligned_cols=117 Identities=18% Similarity=0.221 Sum_probs=73.5
Q ss_pred CCCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCC-CCccCCccchh--------------ccCc--------------
Q 010217 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN-YFAFTPLLPSV--------------TCGT-------------- 106 (515)
Q Consensus 56 ~~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~-~~~~~~~~~~~--------------~~g~-------------- 106 (515)
...+||+|||||+||++||..|++.|.+|+|||+.. .++..+..+.. ..+.
T Consensus 19 ~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~~ 98 (641)
T 3cp8_A 19 SHMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRM 98 (641)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEEE
T ss_pred cCcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCchhh
Confidence 345899999999999999999999999999999874 23322111100 0000
Q ss_pred ---------------ccccccccchHHHHhhc-CceEEEEEeEEEEEecCCCEEE-EeeCCccCCCCCceEEeecCEEEE
Q 010217 107 ---------------VEARSIVEPVRNIVRKK-NVDICFWEAECFKIDAENKKVY-CRSSQNTNLNGKEEFCMDYDYLVI 169 (515)
Q Consensus 107 ---------------~~~~~~~~~~~~~~~~~-~i~v~~~~~~v~~id~~~~~v~-~~~~~~~~~~~~~~~~~~~d~lvi 169 (515)
.+...+...+.+.+.+. +++ +++++|+.+..++..|. +... ++ ..+.+|.||+
T Consensus 99 l~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~--I~~~~V~~L~~d~g~V~GV~t~------~G--~~i~Ad~VVL 168 (641)
T 3cp8_A 99 LNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNID--LLQDTVIGVSANSGKFSSVTVR------SG--RAIQAKAAIL 168 (641)
T ss_dssp ECSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEE--EEECCEEEEEEETTEEEEEEET------TS--CEEEEEEEEE
T ss_pred cccccCccccchhhhcCHHHHHHHHHHHHHhCCCCE--EEeeEEEEEEecCCEEEEEEEC------CC--cEEEeCEEEE
Confidence 00011222344455553 766 45778998876665543 3321 11 1799999999
Q ss_pred ccCCCcCCCCCCC
Q 010217 170 AMGARANTFNTPG 182 (515)
Q Consensus 170 AtG~~~~~~~ipG 182 (515)
|||+.++.+.++|
T Consensus 169 ATG~~s~~~i~~G 181 (641)
T 3cp8_A 169 ACGTFLNGLIHIG 181 (641)
T ss_dssp CCTTCBTCEEEET
T ss_pred CcCCCCCccceee
Confidence 9999876554444
No 110
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.79 E-value=9.8e-09 Score=107.18 Aligned_cols=53 Identities=15% Similarity=0.076 Sum_probs=45.5
Q ss_pred HHHHHHHHHHhhcCCeEEEcCcEEEEEe--CCeEEEEecCCCceEEEecCeEEEccC
Q 010217 278 KRITAFAEEKFSRDGIDVKLGSMVVKVT--DKEIFTKVRGNGETSSMPYGMVVWSTG 332 (515)
Q Consensus 278 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~--~~~v~~~~~~~G~~~~i~~D~vi~a~G 332 (515)
..+.+.+.+.+++.|++|+++++|++|. +++++.+.+.+|++ +.||.||++++
T Consensus 221 ~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~--~~ad~VV~~a~ 275 (501)
T 4dgk_A 221 GALVQGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRR--FLTQAVASNAD 275 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCE--EECSCEEECCC
T ss_pred cchHHHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEecCCcE--EEcCEEEECCC
Confidence 4677888899999999999999999995 56777777788885 99999999887
No 111
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=98.78 E-value=1.7e-07 Score=93.23 Aligned_cols=67 Identities=9% Similarity=0.163 Sum_probs=49.8
Q ss_pred cHHHHHHHHHHhhcCCeEEEcCcEEEEEeC--Ce-EEEEecCCCceEEEecCeEEEccCCCCccchHHHHHHh-CC
Q 010217 277 DKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KE-IFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQV-GQ 348 (515)
Q Consensus 277 ~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~--~~-v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~-~~ 348 (515)
+..+...+.+.+++.|++++++++|+++.. ++ +.+ .+.+|+..++.+|.||+|+|. +...+++.+ |+
T Consensus 149 ~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v-~~~~g~~~~~~a~~VV~A~G~----~s~~l~~~~~g~ 219 (369)
T 3dme_A 149 SHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFEL-DFGGAEPMTLSCRVLINAAGL----HAPGLARRIEGI 219 (369)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEE-EECTTSCEEEEEEEEEECCGG----GHHHHHHTEETS
T ss_pred HHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEE-EECCCceeEEEeCEEEECCCc----chHHHHHHhcCC
Confidence 356777888889999999999999999974 34 444 346675446999999999993 233666666 54
No 112
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.77 E-value=1.1e-08 Score=107.09 Aligned_cols=111 Identities=14% Similarity=0.186 Sum_probs=73.6
Q ss_pred CCCCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCc--------------------------cCCcc------chh
Q 010217 55 GIKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFA--------------------------FTPLL------PSV 102 (515)
Q Consensus 55 ~~~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~--------------------------~~~~~------~~~ 102 (515)
....+||||||||++|++||+.|++.|++|+|||+.+..+ +...+ ...
T Consensus 104 ~~~~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i 183 (549)
T 3nlc_A 104 ENLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQV 183 (549)
T ss_dssp TTCCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCS
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEe
Confidence 3456899999999999999999999999999999885431 00000 000
Q ss_pred ---------------ccCc--------------ccccccccchHHHHhhcCceEEEEEeEEEEEecCCCE---EEEeeCC
Q 010217 103 ---------------TCGT--------------VEARSIVEPVRNIVRKKNVDICFWEAECFKIDAENKK---VYCRSSQ 150 (515)
Q Consensus 103 ---------------~~g~--------------~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~---v~~~~~~ 150 (515)
..+. .....+...+.+.+.+.|++++ .+++|+.|..++.. |.+.++.
T Consensus 184 ~~~~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~-~~t~V~~I~~~~~~v~gV~l~~G~ 262 (549)
T 3nlc_A 184 KDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIR-FSTRVDDLHMEDGQITGVTLSNGE 262 (549)
T ss_dssp CCTTCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEE-SSCCEEEEEESSSBEEEEEETTSC
T ss_pred ccccccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEE-eCCEEEEEEEeCCEEEEEEECCCC
Confidence 0000 0002233345566677888874 57789998776553 3333322
Q ss_pred ccCCCCCceEEeecCEEEEccCCCcC
Q 010217 151 NTNLNGKEEFCMDYDYLVIAMGARAN 176 (515)
Q Consensus 151 ~~~~~~~~~~~~~~d~lviAtG~~~~ 176 (515)
++.+|.||+|+|..+.
T Consensus 263 ----------~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 263 ----------EIKSRHVVLAVGHSAR 278 (549)
T ss_dssp ----------EEECSCEEECCCTTCH
T ss_pred ----------EEECCEEEECCCCChh
Confidence 7999999999999873
No 113
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.73 E-value=8.6e-09 Score=105.14 Aligned_cols=51 Identities=14% Similarity=0.165 Sum_probs=42.0
Q ss_pred cHHHHHHHHHHhhcCCeEEEcCcEEEEEeC--CeEEEEecCCCceEEEecCeEEEccC
Q 010217 277 DKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTG 332 (515)
Q Consensus 277 ~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~--~~v~~~~~~~G~~~~i~~D~vi~a~G 332 (515)
...+.+.+.+.+++.|++|+++++|++|.. +++ +. .+|+. +.+|.||+|+|
T Consensus 188 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~v--V~-~~g~~--~~ad~Vv~a~~ 240 (421)
T 3nrn_A 188 CKAVIDELERIIMENKGKILTRKEVVEINIEEKKV--YT-RDNEE--YSFDVAISNVG 240 (421)
T ss_dssp HHHHHHHHHHHHHTTTCEEESSCCEEEEETTTTEE--EE-TTCCE--EECSEEEECSC
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCeEEEEEEECCEE--EE-eCCcE--EEeCEEEECCC
Confidence 357788888999999999999999999974 355 33 45664 99999999999
No 114
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.71 E-value=3.1e-09 Score=113.49 Aligned_cols=39 Identities=23% Similarity=0.349 Sum_probs=35.1
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCcc
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAF 95 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~ 95 (515)
..+||||||||+||+++|..|++.|++|+|||+.+..++
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg 83 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSG 83 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSS
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCC
Confidence 357999999999999999999999999999999887664
No 115
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.70 E-value=3.2e-09 Score=110.58 Aligned_cols=151 Identities=13% Similarity=0.158 Sum_probs=97.8
Q ss_pred ecCEEEEccCCCcCCCCCCCCC-CccccccChhHHHHHHHHHHHHHHhcCCCCCCHHHHhccceEEEECCChhHHHHHHH
Q 010217 163 DYDYLVIAMGARANTFNTPGVE-ENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAE 241 (515)
Q Consensus 163 ~~d~lviAtG~~~~~~~ipG~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~ 241 (515)
.||++++++|++|..+++++.+ +.+.......+..++...- ...............+|+|||||++|+.+|..
T Consensus 37 ~~~~l~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~dVvIVGgG~aGl~aA~~ 110 (497)
T 2bry_A 37 SFQGLCRALGVESGGGLSQYHKIKAQLNYWSAKSLWAKLDKR------ASQPVYQQGQACTNTKCLVVGAGPCGLRAAVE 110 (497)
T ss_dssp HHHHHHHHHTCCTTCHHHHHHHHHHTCCSTTTHHHHHHHHHH------HTSGGGGGGTTTTTCEEEEECCSHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCcEeehhhHHHHHHHHHHHhhhhhhhh------hccccccCccccCCCCEEEECccHHHHHHHHH
Confidence 4788999999998776665543 2333444444444331110 00000000001234699999999999999999
Q ss_pred HHHhhHHHHHhhCcccCCCcEEEEEecccccccc-----cc----------------------------HHHHHHHHHHh
Q 010217 242 LHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM-----FD----------------------------KRITAFAEEKF 288 (515)
Q Consensus 242 l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~~-----~~----------------------------~~~~~~~~~~l 288 (515)
|++. |.+|+|+++.+.+... .+ ..+.+.+.+.+
T Consensus 111 La~~--------------G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 176 (497)
T 2bry_A 111 LALL--------------GARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQLLLLKVA 176 (497)
T ss_dssp HHHT--------------TCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHHHHHHHHH
T ss_pred HHHC--------------CCeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHHHHHHHHH
Confidence 9985 6899999988654210 01 45566777888
Q ss_pred hcCCeEEEcCcEEEEEeC-----CeEEEEec-C-CCceEEEecCeEEEccCC
Q 010217 289 SRDGIDVKLGSMVVKVTD-----KEIFTKVR-G-NGETSSMPYGMVVWSTGI 333 (515)
Q Consensus 289 ~~~gV~v~~~~~v~~i~~-----~~v~~~~~-~-~G~~~~i~~D~vi~a~G~ 333 (515)
++.||+++++++|+++.. +.+.+... . +|+..++.+|.||.|+|.
T Consensus 177 ~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~ 228 (497)
T 2bry_A 177 LLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGG 228 (497)
T ss_dssp HHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCT
T ss_pred HhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCC
Confidence 889999999999999974 22333221 2 563224899999999995
No 116
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.69 E-value=4.9e-08 Score=99.50 Aligned_cols=52 Identities=19% Similarity=0.222 Sum_probs=41.8
Q ss_pred HHHHHHHHHHhhcCCeEEEcCcEEEEEe--CCeEEEEecCCCceEEEecCeEEEccC
Q 010217 278 KRITAFAEEKFSRDGIDVKLGSMVVKVT--DKEIFTKVRGNGETSSMPYGMVVWSTG 332 (515)
Q Consensus 278 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~--~~~v~~~~~~~G~~~~i~~D~vi~a~G 332 (515)
..+.+.+.+.+++.|++|+++++|++|. +++++.+.+ +|++ +.+|.||+|+|
T Consensus 196 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~-~g~~--~~ad~VV~a~~ 249 (425)
T 3ka7_A 196 KGIIDALETVISANGGKIHTGQEVSKILIENGKAAGIIA-DDRI--HDADLVISNLG 249 (425)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEE-TTEE--EECSEEEECSC
T ss_pred HHHHHHHHHHHHHcCCEEEECCceeEEEEECCEEEEEEE-CCEE--EECCEEEECCC
Confidence 4677888899999999999999999996 345653443 3654 99999999998
No 117
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.68 E-value=1.7e-08 Score=103.77 Aligned_cols=111 Identities=19% Similarity=0.218 Sum_probs=71.3
Q ss_pred CCCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccC--------Cccc------h----hc--------------
Q 010217 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFT--------PLLP------S----VT-------------- 103 (515)
Q Consensus 56 ~~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~--------~~~~------~----~~-------------- 103 (515)
.+.+||+|||||+||++||..|++.|.+|+|||+.+..+.. ..+. . +.
T Consensus 24 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (447)
T 2i0z_A 24 AMHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFN 103 (447)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSC
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcC
Confidence 34589999999999999999999999999999998754321 0000 0 00
Q ss_pred ----------cC---------ccc-----ccccccchHHHHhhcCceEEEEEeEEEEEecCCCE-EEEeeCCccCCCCCc
Q 010217 104 ----------CG---------TVE-----ARSIVEPVRNIVRKKNVDICFWEAECFKIDAENKK-VYCRSSQNTNLNGKE 158 (515)
Q Consensus 104 ----------~g---------~~~-----~~~~~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~-v~~~~~~~~~~~~~~ 158 (515)
.| ... ...+...+.+.+.+.|+++ +.+++|+.+..++.. +.+... ++.
T Consensus 104 ~~~~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i-~~~~~V~~i~~~~~~v~~V~~~------~G~ 176 (447)
T 2i0z_A 104 NEDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKI-RTNTPVETIEYENGQTKAVILQ------TGE 176 (447)
T ss_dssp HHHHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEE-ECSCCEEEEEEETTEEEEEEET------TCC
T ss_pred HHHHHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEE-EeCcEEEEEEecCCcEEEEEEC------CCC
Confidence 00 000 0122233455566778887 457788888755554 333321 111
Q ss_pred eEEeecCEEEEccCCCc
Q 010217 159 EFCMDYDYLVIAMGARA 175 (515)
Q Consensus 159 ~~~~~~d~lviAtG~~~ 175 (515)
.+.+|.||+|+|...
T Consensus 177 --~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 177 --VLETNHVVIAVGGKS 191 (447)
T ss_dssp --EEECSCEEECCCCSS
T ss_pred --EEECCEEEECCCCCc
Confidence 689999999999876
No 118
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.65 E-value=7.8e-07 Score=89.83 Aligned_cols=53 Identities=13% Similarity=0.117 Sum_probs=41.5
Q ss_pred HHHHHHHHHHhhcCCeEEEcCcEEEEEeC--CeEEEEecCCCceEEEecCeEEEccCC
Q 010217 278 KRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGI 333 (515)
Q Consensus 278 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~--~~v~~~~~~~G~~~~i~~D~vi~a~G~ 333 (515)
..+...+.+.+++.|++++.+++|+++.. +.+..+.+.+|+ +.+|.||+|+|.
T Consensus 174 ~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~---~~a~~vV~a~G~ 228 (405)
T 2gag_B 174 DHVAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRGT---IHAGKVALAGAG 228 (405)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTCC---EEEEEEEECCGG
T ss_pred HHHHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCce---EECCEEEECCch
Confidence 46777788888899999999999999963 344444445663 899999999993
No 119
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.64 E-value=5.2e-08 Score=99.21 Aligned_cols=111 Identities=20% Similarity=0.309 Sum_probs=70.7
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCcc---CCccchh--------------ccCc--------------
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAF---TPLLPSV--------------TCGT-------------- 106 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~---~~~~~~~--------------~~g~-------------- 106 (515)
.+||+|||||+||+++|..|++.|++|+|+|+.+.... ..+.+.. ..+.
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 84 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFVRGKEI 84 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEEETTEE
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEEeCCee
Confidence 47999999999999999999999999999999863221 1111110 0000
Q ss_pred ------------------ccccccccchHHHHhhcCceEEEEEeEEEEEecCCCE--EEEeeCCccCCCCCceEEeecCE
Q 010217 107 ------------------VEARSIVEPVRNIVRKKNVDICFWEAECFKIDAENKK--VYCRSSQNTNLNGKEEFCMDYDY 166 (515)
Q Consensus 107 ------------------~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~--v~~~~~~~~~~~~~~~~~~~~d~ 166 (515)
++...+...+.+.+.+.|+++. .+++|+.++.++.. +.+... +++..++.+|.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~-~~~~v~~i~~~~~~~~v~v~~~------~g~~~~~~a~~ 157 (421)
T 3nix_A 85 ADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVE-YEVGVTDIKFFGTDSVTTIEDI------NGNKREIEARF 157 (421)
T ss_dssp EEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEE-CSEEEEEEEEETTEEEEEEEET------TSCEEEEEEEE
T ss_pred EEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEE-cCCEEEEEEEeCCEEEEEEEcC------CCCEEEEEcCE
Confidence 0000111223445556688873 47789988766543 444432 23344799999
Q ss_pred EEEccCCCc
Q 010217 167 LVIAMGARA 175 (515)
Q Consensus 167 lviAtG~~~ 175 (515)
||.|+|...
T Consensus 158 vV~A~G~~s 166 (421)
T 3nix_A 158 IIDASGYGR 166 (421)
T ss_dssp EEECCGGGC
T ss_pred EEECCCCch
Confidence 999999764
No 120
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.62 E-value=2.1e-08 Score=100.68 Aligned_cols=38 Identities=16% Similarity=0.256 Sum_probs=34.1
Q ss_pred CCCCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCC
Q 010217 55 GIKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNY 92 (515)
Q Consensus 55 ~~~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~ 92 (515)
....+||+|||||++|+++|+.|++.|++|+|||+...
T Consensus 14 ~~~~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~~ 51 (382)
T 1ryi_A 14 MKRHYEAVVIGGGIIGSAIAYYLAKENKNTALFESGTM 51 (382)
T ss_dssp CCSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSST
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCC
Confidence 34568999999999999999999999999999998753
No 121
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.60 E-value=3.6e-08 Score=99.75 Aligned_cols=36 Identities=19% Similarity=0.206 Sum_probs=33.2
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYF 93 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~ 93 (515)
.++|+|||||++|+++|..|++.|++|+|||+.+..
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~ 41 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRE 41 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCC
Confidence 579999999999999999999999999999987654
No 122
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.60 E-value=7.4e-08 Score=99.21 Aligned_cols=114 Identities=18% Similarity=0.181 Sum_probs=71.1
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCc--cCCc--------cchhc---------------------cCc
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFA--FTPL--------LPSVT---------------------CGT 106 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~--~~~~--------~~~~~---------------------~g~ 106 (515)
.+||+|||||+||+++|..|++.|++|+|+|+.+... .... +.... .+.
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~ 85 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPDMQ 85 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECTTSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECCCCc
Confidence 5799999999999999999999999999999886431 1100 00000 000
Q ss_pred -----------ccccccccchHHHHhhcCceEEEEEeEEEEEecCCCE---EEEeeCCccCCCCCceEEeecCEEEEccC
Q 010217 107 -----------VEARSIVEPVRNIVRKKNVDICFWEAECFKIDAENKK---VYCRSSQNTNLNGKEEFCMDYDYLVIAMG 172 (515)
Q Consensus 107 -----------~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~---v~~~~~~~~~~~~~~~~~~~~d~lviAtG 172 (515)
++...+...+.+.+.+.|+++. .+++|+.++.++.. |.+.+.. +++..++.+|.||.|+|
T Consensus 86 ~~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~-~~~~v~~i~~~~~~v~gv~~~~~~-----~G~~~~~~ad~VV~AdG 159 (453)
T 3atr_A 86 TVWTVNGEGFELNAPLYNQRVLKEAQDRGVEIW-DLTTAMKPIFEDGYVKGAVLFNRR-----TNEELTVYSKVVVEATG 159 (453)
T ss_dssp CEEEEEEEEEEECHHHHHHHHHHHHHHTTCEEE-SSEEEEEEEEETTEEEEEEEEETT-----TTEEEEEECSEEEECCG
T ss_pred eEEeECCCcEEEcHHHHHHHHHHHHHHcCCEEE-eCcEEEEEEEECCEEEEEEEEEcC-----CCceEEEEcCEEEECcC
Confidence 0000111223344455788773 47788888776655 3444210 12234799999999999
Q ss_pred CCcCC
Q 010217 173 ARANT 177 (515)
Q Consensus 173 ~~~~~ 177 (515)
.....
T Consensus 160 ~~s~v 164 (453)
T 3atr_A 160 YSRSF 164 (453)
T ss_dssp GGCTT
T ss_pred Cchhh
Confidence 86543
No 123
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.59 E-value=9.7e-08 Score=101.29 Aligned_cols=38 Identities=26% Similarity=0.248 Sum_probs=35.0
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCcc
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAF 95 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~ 95 (515)
.+||||||||+||++||..|++.|++|+|||+.+..++
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg 163 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGG 163 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCC
Confidence 57999999999999999999999999999999877654
No 124
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.59 E-value=4.5e-08 Score=98.41 Aligned_cols=37 Identities=19% Similarity=0.247 Sum_probs=33.9
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCc
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFA 94 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~ 94 (515)
.+||+||||||||++||+.|++.|++|+|||+.+.++
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~ 40 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIG 40 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCC
Confidence 4799999999999999999999999999999977654
No 125
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.58 E-value=1.1e-07 Score=100.22 Aligned_cols=37 Identities=27% Similarity=0.329 Sum_probs=33.7
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCC
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYF 93 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~ 93 (515)
...+|+|||||++|+++|+.|++.|++|+|||+.+..
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~ 40 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGL 40 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSC
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 4579999999999999999999999999999987643
No 126
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.58 E-value=7.6e-08 Score=95.18 Aligned_cols=37 Identities=16% Similarity=0.184 Sum_probs=33.7
Q ss_pred CeEEEECCcHHHHHHHHhccC---CCCeEEEEcCCCCCcc
Q 010217 59 KKVVVLGTGWAGTSFLKNLNN---PSYDVQVISPRNYFAF 95 (515)
Q Consensus 59 ~~VvIIGgG~AGlsaA~~L~~---~g~~V~vie~~~~~~~ 95 (515)
+||+|||||++|+++|+.|++ .|++|+|+|+++..++
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg 41 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGG 41 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCG
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCcc
Confidence 589999999999999999999 9999999999876554
No 127
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.58 E-value=8.2e-08 Score=97.34 Aligned_cols=39 Identities=23% Similarity=0.255 Sum_probs=33.6
Q ss_pred CCCCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCC
Q 010217 55 GIKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYF 93 (515)
Q Consensus 55 ~~~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~ 93 (515)
..++++|+|||||++|+++|..|++.|++|+|||+.+..
T Consensus 20 ~~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~ 58 (407)
T 3rp8_A 20 FQGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEI 58 (407)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 345689999999999999999999999999999988654
No 128
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.58 E-value=7.3e-08 Score=94.83 Aligned_cols=37 Identities=22% Similarity=0.300 Sum_probs=33.9
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCc
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFA 94 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~ 94 (515)
++||+|||||++|+++|..|++.|++|+|||+.+..+
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~g 38 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSG 38 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCc
Confidence 4799999999999999999999999999999987554
No 129
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.56 E-value=4.4e-08 Score=98.14 Aligned_cols=37 Identities=24% Similarity=0.161 Sum_probs=33.1
Q ss_pred CCCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCC
Q 010217 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYF 93 (515)
Q Consensus 56 ~~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~ 93 (515)
...++|+|||||++|+++|++|+ +|++|+|+|+++..
T Consensus 7 ~~~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~~~ 43 (381)
T 3nyc_A 7 PIEADYLVIGAGIAGASTGYWLS-AHGRVVVLEREAQP 43 (381)
T ss_dssp EEECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSSST
T ss_pred CCcCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCCCc
Confidence 34689999999999999999999 69999999998644
No 130
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.55 E-value=1.6e-07 Score=101.64 Aligned_cols=37 Identities=16% Similarity=0.251 Sum_probs=33.4
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCC
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYF 93 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~ 93 (515)
..+||||||||++|+++|+.|++.|++|+|+|+.+..
T Consensus 271 ~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~ 307 (676)
T 3ps9_A 271 SKREAAIIGGGIASALLSLALLRRGWQVTLYCADEAP 307 (676)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCcc
Confidence 3489999999999999999999999999999986543
No 131
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.55 E-value=1.2e-07 Score=95.19 Aligned_cols=35 Identities=31% Similarity=0.517 Sum_probs=32.6
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCC
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~ 91 (515)
..+||+|||||++|+++|++|++.|++|+|||+..
T Consensus 4 ~~~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~ 38 (382)
T 1y56_B 4 EKSEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRF 38 (382)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 35799999999999999999999999999999874
No 132
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.54 E-value=1.4e-07 Score=98.66 Aligned_cols=113 Identities=20% Similarity=0.286 Sum_probs=72.1
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccC---Cccchh--------------c-cC------------c
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFT---PLLPSV--------------T-CG------------T 106 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~---~~~~~~--------------~-~g------------~ 106 (515)
..+||+|||||+||+++|..|++.|++|+|||+.+..... .+.+.. . .+ .
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~~ 85 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRWGK 85 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEECSS
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEEecC
Confidence 3579999999999999999999999999999988632111 011100 0 00 0
Q ss_pred ----------------------ccccccccchHHHHhhcCceEEEEEeEEEEEecCCCE---EEEeeCCccCCCCCceEE
Q 010217 107 ----------------------VEARSIVEPVRNIVRKKNVDICFWEAECFKIDAENKK---VYCRSSQNTNLNGKEEFC 161 (515)
Q Consensus 107 ----------------------~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~---v~~~~~~~~~~~~~~~~~ 161 (515)
++...+...+.+.+.+.|+++ +.+++|+.+..++.. |.+.+. +++..+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i-~~~~~V~~v~~~~~~v~gv~~~~~------dG~~~~ 158 (512)
T 3e1t_A 86 EPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDV-RERHEVIDVLFEGERAVGVRYRNT------EGVELM 158 (512)
T ss_dssp CSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEE-ESSCEEEEEEEETTEEEEEEEECS------SSCEEE
T ss_pred CccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEE-EcCCEEEEEEEECCEEEEEEEEeC------CCCEEE
Confidence 000011112344555678876 346789988876664 444432 232358
Q ss_pred eecCEEEEccCCCcC
Q 010217 162 MDYDYLVIAMGARAN 176 (515)
Q Consensus 162 ~~~d~lviAtG~~~~ 176 (515)
+.+|.||.|+|....
T Consensus 159 i~ad~VI~AdG~~S~ 173 (512)
T 3e1t_A 159 AHARFIVDASGNRTR 173 (512)
T ss_dssp EEEEEEEECCCTTCS
T ss_pred EEcCEEEECCCcchH
Confidence 999999999998754
No 133
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.53 E-value=8.1e-08 Score=101.52 Aligned_cols=114 Identities=16% Similarity=0.131 Sum_probs=68.7
Q ss_pred CCCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCC----cc-------------ch----------h-ccCc-
Q 010217 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTP----LL-------------PS----------V-TCGT- 106 (515)
Q Consensus 56 ~~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~----~~-------------~~----------~-~~g~- 106 (515)
.+.++|+|||||++|+++|..|++.|++|+|||+.+...... +. .. . ..+.
T Consensus 47 ~~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~ 126 (570)
T 3fmw_A 47 ALTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIF 126 (570)
T ss_dssp ----CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCcc
Confidence 346799999999999999999999999999999875432110 00 00 0 0000
Q ss_pred ---cc---------------ccccccchHHHHhhcCceEEEEEeEEEEEecCCCEEEEeeCCccCCCCCceEEeecCEEE
Q 010217 107 ---VE---------------ARSIVEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLV 168 (515)
Q Consensus 107 ---~~---------------~~~~~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lv 168 (515)
.. ...+...+.+.+.+.|++++ ..++|+.++.++..+.+.... .++ ..++.+|+||
T Consensus 127 ~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~-~~~~v~~l~~~~~~v~v~~~~----~~G-~~~~~a~~vV 200 (570)
T 3fmw_A 127 TQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIP-RGHEVTRLRQDAEAVEVTVAG----PSG-PYPVRARYGV 200 (570)
T ss_dssp TTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECC-BSCEEEECCBCSSCEEEEEEE----TTE-EEEEEESEEE
T ss_pred cccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEE-eCCEEEEEEEcCCeEEEEEEe----CCC-cEEEEeCEEE
Confidence 00 01111223444555677763 477899988766655443210 011 1479999999
Q ss_pred EccCCCc
Q 010217 169 IAMGARA 175 (515)
Q Consensus 169 iAtG~~~ 175 (515)
.|.|.+.
T Consensus 201 ~ADG~~S 207 (570)
T 3fmw_A 201 GCDGGRS 207 (570)
T ss_dssp ECSCSSC
T ss_pred EcCCCCc
Confidence 9999864
No 134
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.52 E-value=7.5e-08 Score=97.06 Aligned_cols=112 Identities=16% Similarity=0.187 Sum_probs=70.2
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCC-----c----cchh--------------------ccCcc-
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTP-----L----LPSV--------------------TCGTV- 107 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~-----~----~~~~--------------------~~g~~- 107 (515)
.+||+|||||+||+++|..|++.|++|+|||+.+..+... . +... ..+..
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRP 83 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcceEEEEcCCCCEE
Confidence 4799999999999999999999999999999987543310 0 0000 00000
Q ss_pred -c--c-------------cccccchHHHHhhcCceEEEEEeEEEEEecCCCEEE-EeeCCccCCCCCceEEeecCEEEEc
Q 010217 108 -E--A-------------RSIVEPVRNIVRKKNVDICFWEAECFKIDAENKKVY-CRSSQNTNLNGKEEFCMDYDYLVIA 170 (515)
Q Consensus 108 -~--~-------------~~~~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~-~~~~~~~~~~~~~~~~~~~d~lviA 170 (515)
. . ..+...+.+.+.+.|+++ +.+++|+.+..++..+. +.... .++..++.+|.||.|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i-~~~~~v~~i~~~~~~v~gv~~~~-----~~~~~~~~a~~vV~A 157 (397)
T 3cgv_A 84 IILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADV-WVKSPALGVIKENGKVAGAKIRH-----NNEIVDVRAKMVIAA 157 (397)
T ss_dssp EEEC-----CCCEEEECHHHHHHHHHHHHHHHTCEE-ESSCCEEEEEEETTEEEEEEEEE-----TTEEEEEEEEEEEEC
T ss_pred EEEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEE-EECCEEEEEEEeCCEEEEEEEEE-----CCeEEEEEcCEEEEC
Confidence 0 0 001112334455568776 34778888877666543 32210 122348999999999
Q ss_pred cCCCc
Q 010217 171 MGARA 175 (515)
Q Consensus 171 tG~~~ 175 (515)
+|...
T Consensus 158 ~G~~s 162 (397)
T 3cgv_A 158 DGFES 162 (397)
T ss_dssp CCTTC
T ss_pred CCcch
Confidence 99764
No 135
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.52 E-value=1.4e-07 Score=99.91 Aligned_cols=39 Identities=18% Similarity=0.243 Sum_probs=35.0
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCcc
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAF 95 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~ 95 (515)
...||||||||+||++||+.|++.|++|+|||+.+..++
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg 158 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGG 158 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCC
Confidence 456999999999999999999999999999999876654
No 136
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.49 E-value=2.8e-07 Score=95.97 Aligned_cols=115 Identities=18% Similarity=0.198 Sum_probs=72.4
Q ss_pred CCCCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCC----c-------------cchhcc----------Cc-
Q 010217 55 GIKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTP----L-------------LPSVTC----------GT- 106 (515)
Q Consensus 55 ~~~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~----~-------------~~~~~~----------g~- 106 (515)
..+.++|+||||||+|+++|..|++.|++|+|||+.+.....+ + ...+.. +.
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~ 87 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGGLP 87 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETTEE
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhcccccccccccee
Confidence 3557899999999999999999999999999999876532211 0 000000 00
Q ss_pred cc--------c-------cccccchHHHHhhcCceEEEEEeEEEEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEcc
Q 010217 107 VE--------A-------RSIVEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAM 171 (515)
Q Consensus 107 ~~--------~-------~~~~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAt 171 (515)
.+ + ..+...+.+.+.+.|++++ ...+|+++..++..|++.... +.+..++.+|+||.|.
T Consensus 88 ~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~-~~~~v~~i~~~~~~v~v~~~~-----~~g~~~~~a~~vVgAD 161 (500)
T 2qa1_A 88 IDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIR-RGHEVLSLTDDGAGVTVEVRG-----PEGKHTLRAAYLVGCD 161 (500)
T ss_dssp EEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEE-ETCEEEEEEEETTEEEEEEEE-----TTEEEEEEESEEEECC
T ss_pred cccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEE-CCcEEEEEEEcCCeEEEEEEc-----CCCCEEEEeCEEEECC
Confidence 00 0 0011113344556688874 478899987766655443211 1123479999999999
Q ss_pred CCCc
Q 010217 172 GARA 175 (515)
Q Consensus 172 G~~~ 175 (515)
|.+.
T Consensus 162 G~~S 165 (500)
T 2qa1_A 162 GGRS 165 (500)
T ss_dssp CTTC
T ss_pred Ccch
Confidence 9864
No 137
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.47 E-value=7.9e-08 Score=96.07 Aligned_cols=35 Identities=14% Similarity=0.225 Sum_probs=32.5
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNY 92 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~ 92 (515)
.+||+|||||++|+++|++|++.|++|+|||+...
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~ 36 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMP 36 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 47999999999999999999999999999998754
No 138
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.47 E-value=2e-07 Score=98.73 Aligned_cols=35 Identities=26% Similarity=0.382 Sum_probs=32.6
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNY 92 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~ 92 (515)
.+||+|||||+||+++|..|++.|++|+|||+.+.
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~ 57 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAF 57 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCS
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCC
Confidence 57999999999999999999999999999998853
No 139
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.47 E-value=2.5e-07 Score=93.49 Aligned_cols=37 Identities=30% Similarity=0.367 Sum_probs=33.6
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCC
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYF 93 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~ 93 (515)
+.++|+|||||++|+++|..|++.|++|+|||+.+..
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 61 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDR 61 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSST
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCc
Confidence 3579999999999999999999999999999987643
No 140
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.46 E-value=2.4e-07 Score=95.47 Aligned_cols=103 Identities=17% Similarity=0.231 Sum_probs=77.1
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEEE
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~ 136 (515)
..++|+|||||++|+.+|..|++.|.+|+|+++.+.+. +. ...++...+.+.+++.|+++. .+.+|..
T Consensus 166 ~~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l-----~~------~~~~~~~~l~~~l~~~Gv~i~-~~~~V~~ 233 (455)
T 2yqu_A 166 VPKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRIL-----PT------MDLEVSRAAERVFKKQGLTIR-TGVRVTA 233 (455)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC-----TT------SCHHHHHHHHHHHHHHTCEEE-CSCCEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccc-----cc------cCHHHHHHHHHHHHHCCCEEE-ECCEEEE
Confidence 35899999999999999999999999999999886532 11 112344456677788898873 5678999
Q ss_pred EecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCC
Q 010217 137 IDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFN 179 (515)
Q Consensus 137 id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ 179 (515)
++.+++.+.+.... + .++.+|.||+|+|.+|+...
T Consensus 234 i~~~~~~v~v~~~~-----g---~~i~~D~vv~A~G~~p~~~~ 268 (455)
T 2yqu_A 234 VVPEAKGARVELEG-----G---EVLEADRVLVAVGRRPYTEG 268 (455)
T ss_dssp EEEETTEEEEEETT-----S---CEEEESEEEECSCEEECCTT
T ss_pred EEEeCCEEEEEECC-----C---eEEEcCEEEECcCCCcCCCC
Confidence 98776655554311 1 17899999999999987654
No 141
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.46 E-value=1.7e-07 Score=94.70 Aligned_cols=35 Identities=23% Similarity=0.295 Sum_probs=32.5
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNY 92 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~ 92 (515)
..||+|||||++|+++|+.|++.|++|+|||+.+.
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~ 38 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAERGHRVLVLERHTF 38 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCT
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 47999999999999999999999999999998754
No 142
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.46 E-value=7.5e-08 Score=91.17 Aligned_cols=41 Identities=20% Similarity=0.196 Sum_probs=36.8
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCC
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTP 97 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~ 97 (515)
|..+|+|||||||||+||..|++.|++|+|||+++..++..
T Consensus 1 Mt~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~ 41 (336)
T 3kkj_A 1 MTVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRM 41 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGG
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcc
Confidence 35789999999999999999999999999999998887653
No 143
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.45 E-value=3.8e-07 Score=94.15 Aligned_cols=108 Identities=15% Similarity=0.181 Sum_probs=77.2
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEEE
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~ 136 (515)
.+++|+|||||+.|+.+|..|++.|.+|+|+++.+.+.. . ...++...+.+.+++.|+++. .+.++..
T Consensus 168 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-----~------~~~~~~~~l~~~l~~~gV~i~-~~~~v~~ 235 (464)
T 2eq6_A 168 LPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILP-----Q------GDPETAALLRRALEKEGIRVR-TKTKAVG 235 (464)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-----T------SCHHHHHHHHHHHHHTTCEEE-CSEEEEE
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCcccc-----c------cCHHHHHHHHHHHHhcCCEEE-cCCEEEE
Confidence 358999999999999999999999999999998865321 0 112344556777888998873 5778999
Q ss_pred EecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCC
Q 010217 137 IDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFN 179 (515)
Q Consensus 137 id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ 179 (515)
++.+++.+.+....+ ..++..++.+|.||+|+|.+|+...
T Consensus 236 i~~~~~~~~v~~~~~---~~g~~~~i~~D~vv~a~G~~p~~~~ 275 (464)
T 2eq6_A 236 YEKKKDGLHVRLEPA---EGGEGEEVVVDKVLVAVGRKPRTEG 275 (464)
T ss_dssp EEEETTEEEEEEEET---TCCSCEEEEESEEEECSCEEESCTT
T ss_pred EEEeCCEEEEEEeec---CCCceeEEEcCEEEECCCcccCCCC
Confidence 987655443331100 0022347899999999999987653
No 144
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.44 E-value=1.6e-07 Score=94.69 Aligned_cols=35 Identities=20% Similarity=0.330 Sum_probs=32.5
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNY 92 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~ 92 (515)
.++|+|||||++|+++|..|++.|++|+|+|+.+.
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 36 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTP 36 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 47999999999999999999999999999998763
No 145
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.44 E-value=1.5e-07 Score=94.65 Aligned_cols=36 Identities=17% Similarity=0.174 Sum_probs=33.0
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYF 93 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~ 93 (515)
.+||+|||||++|+++|++|++.|++|+|||+....
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~~ 38 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPP 38 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 579999999999999999999999999999987543
No 146
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.43 E-value=3.4e-07 Score=95.31 Aligned_cols=114 Identities=18% Similarity=0.190 Sum_probs=71.3
Q ss_pred CCCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCC----c-------------cchhcc----------Cc-c
Q 010217 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTP----L-------------LPSVTC----------GT-V 107 (515)
Q Consensus 56 ~~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~----~-------------~~~~~~----------g~-~ 107 (515)
++.++|+||||||+|+++|..|++.|++|+|||+.+.....+ + ...+.. +. .
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~ 89 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGRPV 89 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTEEE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecceec
Confidence 456899999999999999999999999999999875432211 0 000000 00 0
Q ss_pred c--------c-------cccccchHHHHhhcCceEEEEEeEEEEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccC
Q 010217 108 E--------A-------RSIVEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMG 172 (515)
Q Consensus 108 ~--------~-------~~~~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG 172 (515)
+ + ..+...+.+.+.+.|++++ ...+|+.+..++..|++.... +.+..++.+|+||.|.|
T Consensus 90 ~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~-~~~~v~~i~~~~~~v~v~~~~-----~~g~~~~~a~~vVgADG 163 (499)
T 2qa2_A 90 DFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELL-RGHTVRALTDEGDHVVVEVEG-----PDGPRSLTTRYVVGCDG 163 (499)
T ss_dssp EGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEE-ESCEEEEEEECSSCEEEEEEC-----SSCEEEEEEEEEEECCC
T ss_pred ccccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEE-cCCEEEEEEEeCCEEEEEEEc-----CCCcEEEEeCEEEEccC
Confidence 0 0 0111113344556688874 477899987666544443211 11135799999999999
Q ss_pred CCc
Q 010217 173 ARA 175 (515)
Q Consensus 173 ~~~ 175 (515)
.+.
T Consensus 164 ~~S 166 (499)
T 2qa2_A 164 GRS 166 (499)
T ss_dssp TTC
T ss_pred ccc
Confidence 864
No 147
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.42 E-value=4.5e-07 Score=91.55 Aligned_cols=36 Identities=19% Similarity=0.282 Sum_probs=33.3
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCC
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNY 92 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~ 92 (515)
..++|+|||||++|+++|..|++.|++|+|+|+.+.
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 39 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQ 39 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 357999999999999999999999999999998865
No 148
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.42 E-value=3.9e-07 Score=93.22 Aligned_cols=37 Identities=30% Similarity=0.445 Sum_probs=33.4
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCC-eEEEEcCCCCC
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSY-DVQVISPRNYF 93 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~-~V~vie~~~~~ 93 (515)
..+||||||||++|+++|++|++.|+ +|+|+|+....
T Consensus 5 ~~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~~ 42 (438)
T 3dje_A 5 KSSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPVP 42 (438)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCCC
Confidence 35799999999999999999999999 99999987653
No 149
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.40 E-value=4.6e-07 Score=93.08 Aligned_cols=102 Identities=20% Similarity=0.256 Sum_probs=75.4
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEEE
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~ 136 (515)
..++|+|||+|++|+.+|..|++.|.+|+|+++.+.+... ....++...+.+.+++.|+++. .+.+|..
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~----------~~~~~~~~~l~~~l~~~gv~i~-~~~~v~~ 216 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGV----------YLDKEFTDVLTEEMEANNITIA-TGETVER 216 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT----------TCCHHHHHHHHHHHHTTTEEEE-ESCCEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccc----------cCCHHHHHHHHHHHHhCCCEEE-cCCEEEE
Confidence 4689999999999999999999999999999988653211 0112445556777888898863 4678888
Q ss_pred EecCCCE--EEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCCC
Q 010217 137 IDAENKK--VYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNT 180 (515)
Q Consensus 137 id~~~~~--v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~i 180 (515)
++.+++. +.+ + + .++++|.||+|+|.+|+...+
T Consensus 217 i~~~~~v~~v~~-~-------~---~~i~~d~vi~a~G~~p~~~~~ 251 (447)
T 1nhp_A 217 YEGDGRVQKVVT-D-------K---NAYDADLVVVAVGVRPNTAWL 251 (447)
T ss_dssp EECSSBCCEEEE-S-------S---CEEECSEEEECSCEEESCGGG
T ss_pred EEccCcEEEEEE-C-------C---CEEECCEEEECcCCCCChHHH
Confidence 8876432 333 2 1 178999999999999876533
No 150
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.40 E-value=8.9e-07 Score=93.77 Aligned_cols=39 Identities=18% Similarity=0.225 Sum_probs=35.1
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCcc
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAF 95 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~ 95 (515)
..++|+|||+|+||+++|..|++.|++|+|+|+.+..++
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~ 163 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGG 163 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCc
Confidence 357999999999999999999999999999999876654
No 151
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.40 E-value=4e-07 Score=98.73 Aligned_cols=37 Identities=11% Similarity=0.108 Sum_probs=33.5
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCC
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYF 93 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~ 93 (515)
..+||||||||++|+++|+.|++.|++|+|||+.+..
T Consensus 263 ~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~ 299 (689)
T 3pvc_A 263 RCDDIAIIGGGIVSALTALALQRRGAVVTLYCADAQP 299 (689)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHTTTCCEEEEESSSST
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCCcc
Confidence 4589999999999999999999999999999987543
No 152
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.39 E-value=5e-07 Score=94.39 Aligned_cols=39 Identities=26% Similarity=0.233 Sum_probs=35.3
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCcc
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAF 95 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~ 95 (515)
...||||||||+||++||..|++.|++|+|||+.+..++
T Consensus 40 ~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~GG 78 (510)
T 4at0_A 40 YEADVVVAGYGIAGVAASIEAARAGADVLVLERTSGWGG 78 (510)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCC
Confidence 457999999999999999999999999999999876653
No 153
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.39 E-value=6.4e-07 Score=90.80 Aligned_cols=98 Identities=14% Similarity=0.250 Sum_probs=74.9
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEEE
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~ 136 (515)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+.+... ....++...+.+.+++.|+++. .+.++..
T Consensus 144 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~----------~~~~~~~~~l~~~l~~~GV~i~-~~~~v~~ 212 (408)
T 2gqw_A 144 PQSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSR----------AAPATLADFVARYHAAQGVDLR-FERSVTG 212 (408)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT----------TSCHHHHHHHHHHHHHTTCEEE-ESCCEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccc----------ccCHHHHHHHHHHHHHcCcEEE-eCCEEEE
Confidence 3689999999999999999999999999999988653211 0112344456777888998873 5678888
Q ss_pred EecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCC
Q 010217 137 IDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (515)
Q Consensus 137 id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~ 177 (515)
++ ++ .|.+.++. ++++|.||+|+|.+|+.
T Consensus 213 i~-~~-~v~~~~g~----------~i~~D~vi~a~G~~p~~ 241 (408)
T 2gqw_A 213 SV-DG-VVLLDDGT----------RIAADMVVVGIGVLAND 241 (408)
T ss_dssp EE-TT-EEEETTSC----------EEECSEEEECSCEEECC
T ss_pred EE-CC-EEEECCCC----------EEEcCEEEECcCCCccH
Confidence 88 43 67665432 79999999999998864
No 154
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.39 E-value=5.7e-07 Score=90.42 Aligned_cols=101 Identities=21% Similarity=0.326 Sum_probs=75.0
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEEEE
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~i 137 (515)
.++|+|||+|+.|+.+|..|++.|.+|+|+++.+.+... ....++...+.+.+++.|+++. .+.+|..+
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~----------~~~~~~~~~l~~~l~~~gv~i~-~~~~v~~i 213 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPG----------LLHPAAAKAVQAGLEGLGVRFH-LGPVLASL 213 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT----------TSCHHHHHHHHHHHHTTTCEEE-ESCCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhc----------ccCHHHHHHHHHHHHHcCCEEE-eCCEEEEE
Confidence 689999999999999999999999999999987653211 0122344556777888898873 46788888
Q ss_pred ecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCC
Q 010217 138 DAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (515)
Q Consensus 138 d~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~ 177 (515)
+.+++.+.+.... + .++.+|.||+|+|.+|+.
T Consensus 214 ~~~~~~~~v~~~~-----g---~~i~~d~vv~a~G~~p~~ 245 (384)
T 2v3a_A 214 KKAGEGLEAHLSD-----G---EVIPCDLVVSAVGLRPRT 245 (384)
T ss_dssp EEETTEEEEEETT-----S---CEEEESEEEECSCEEECC
T ss_pred EecCCEEEEEECC-----C---CEEECCEEEECcCCCcCH
Confidence 7665544443211 1 178999999999998865
No 155
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.37 E-value=7.7e-07 Score=93.93 Aligned_cols=36 Identities=14% Similarity=0.350 Sum_probs=33.1
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCC
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNY 92 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~ 92 (515)
..+||+|||||++|+++|+.|++.|++|+|+|+++.
T Consensus 17 ~~~DVvVIGgGi~Gl~~A~~La~~G~~V~LlEk~d~ 52 (561)
T 3da1_A 17 KQLDLLVIGGGITGAGIALDAQVRGIQTGLVEMNDF 52 (561)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSST
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCcEEEEECCCC
Confidence 358999999999999999999999999999999753
No 156
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.37 E-value=3.5e-07 Score=97.04 Aligned_cols=39 Identities=23% Similarity=0.312 Sum_probs=34.7
Q ss_pred CCCCeEEEECCcHHHHHHHHhccCC------CCeEEEEcCCCCCc
Q 010217 56 IKKKKVVVLGTGWAGTSFLKNLNNP------SYDVQVISPRNYFA 94 (515)
Q Consensus 56 ~~~~~VvIIGgG~AGlsaA~~L~~~------g~~V~vie~~~~~~ 94 (515)
.+.+||||||||+||+++|..|++. |++|+|||+.+..+
T Consensus 33 ~~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g 77 (584)
T 2gmh_A 33 AEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIG 77 (584)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTT
T ss_pred ccCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCC
Confidence 3468999999999999999999987 99999999987654
No 157
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.37 E-value=7.2e-07 Score=91.80 Aligned_cols=106 Identities=20% Similarity=0.286 Sum_probs=76.7
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEEE
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~ 136 (515)
..++|+|||||+.|+.+|..|++.|.+|+|+++.+.+.. . ...++...+.+.+++.|+++ +.+.++..
T Consensus 169 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-----~------~~~~~~~~l~~~l~~~gv~i-~~~~~v~~ 236 (455)
T 1ebd_A 169 VPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILS-----G------FEKQMAAIIKKRLKKKGVEV-VTNALAKG 236 (455)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST-----T------SCHHHHHHHHHHHHHTTCEE-EESEEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc-----c------cCHHHHHHHHHHHHHCCCEE-EeCCEEEE
Confidence 358999999999999999999999999999998865321 1 11234455667788889887 35778989
Q ss_pred EecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCC
Q 010217 137 IDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFN 179 (515)
Q Consensus 137 id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ 179 (515)
++.++..+.+.... +++..++.+|.||+|+|.+|+...
T Consensus 237 i~~~~~~~~v~~~~-----~g~~~~~~~D~vv~a~G~~p~~~~ 274 (455)
T 1ebd_A 237 AEEREDGVTVTYEA-----NGETKTIDADYVLVTVGRRPNTDE 274 (455)
T ss_dssp EEEETTEEEEEEEE-----TTEEEEEEESEEEECSCEEESCSS
T ss_pred EEEeCCeEEEEEEe-----CCceeEEEcCEEEECcCCCcccCc
Confidence 88665444333110 111237899999999999987643
No 158
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.35 E-value=4.1e-07 Score=93.71 Aligned_cols=103 Identities=16% Similarity=0.243 Sum_probs=76.4
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEEE
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~ 136 (515)
..++|+|||||++|+.+|..|++.|.+|+|+++.+.+.. . ...++...+.+.+++.|+++. .+.++..
T Consensus 170 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~--~---------~~~~~~~~l~~~l~~~gv~i~-~~~~v~~ 237 (458)
T 1lvl_A 170 LPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILP--T---------YDSELTAPVAESLKKLGIALH-LGHSVEG 237 (458)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSST--T---------SCHHHHHHHHHHHHHHTCEEE-TTCEEEE
T ss_pred cCCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcccc--c---------cCHHHHHHHHHHHHHCCCEEE-ECCEEEE
Confidence 357999999999999999999999999999998875421 1 112344456677788898873 4678999
Q ss_pred EecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCC
Q 010217 137 IDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFN 179 (515)
Q Consensus 137 id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ 179 (515)
++. ++ +.+... +++..++.+|.||+|+|.+|+...
T Consensus 238 i~~-~~-v~v~~~------~G~~~~i~~D~vv~a~G~~p~~~~ 272 (458)
T 1lvl_A 238 YEN-GC-LLANDG------KGGQLRLEADRVLVAVGRRPRTKG 272 (458)
T ss_dssp EET-TE-EEEECS------SSCCCEECCSCEEECCCEEECCSS
T ss_pred EEe-CC-EEEEEC------CCceEEEECCEEEECcCCCcCCCC
Confidence 987 44 655521 121237999999999999987654
No 159
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.35 E-value=1.6e-07 Score=95.12 Aligned_cols=36 Identities=17% Similarity=0.278 Sum_probs=32.5
Q ss_pred CCCeEEEECCcHHHHHHHHhccCC--CCeEEEEcCCCC
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNP--SYDVQVISPRNY 92 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~--g~~V~vie~~~~ 92 (515)
..+||+|||||++|+++|+.|++. |++|+|||+...
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~ 72 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGL 72 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCS
T ss_pred CcCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 357999999999999999999988 999999998753
No 160
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.33 E-value=7.6e-07 Score=92.80 Aligned_cols=34 Identities=18% Similarity=0.427 Sum_probs=32.0
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~ 91 (515)
.+||+|||||++|+++|+.|++.|++|+|+|+.+
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~~G~~V~llE~~~ 36 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQD 36 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEECCC
Confidence 4799999999999999999999999999999875
No 161
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.30 E-value=1.3e-06 Score=88.50 Aligned_cols=36 Identities=17% Similarity=0.314 Sum_probs=33.2
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCe-EEEEcCCCCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYD-VQVISPRNYF 93 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~-V~vie~~~~~ 93 (515)
.++|+|||||++|+++|..|++.|++ |+|||+.+..
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~ 40 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEI 40 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCc
Confidence 47999999999999999999999999 9999988654
No 162
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.29 E-value=1.2e-06 Score=85.63 Aligned_cols=37 Identities=16% Similarity=0.257 Sum_probs=33.7
Q ss_pred CCeEEEECCcHHHHHHHHhccCC--CCeEEEEcCCCCCc
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNP--SYDVQVISPRNYFA 94 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~--g~~V~vie~~~~~~ 94 (515)
.+||+|||||+||+++|+.|++. |++|+|||+.+..+
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~G 117 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPG 117 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccC
Confidence 57999999999999999999975 99999999987665
No 163
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.29 E-value=1.6e-06 Score=88.14 Aligned_cols=99 Identities=18% Similarity=0.227 Sum_probs=75.5
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEEEE
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~i 137 (515)
.++|+|||+|+.|+.+|..|+..|.+|+++++.+.+... .....+...+.+.+++.|++++ .+..|..+
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~----------~~~~~~~~~l~~~l~~~GV~i~-~~~~v~~i 220 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLAR----------VAGEALSEFYQAEHRAHGVDLR-TGAAMDCI 220 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT----------TSCHHHHHHHHHHHHHTTCEEE-ETCCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhh----------hcCHHHHHHHHHHHHhCCCEEE-ECCEEEEE
Confidence 689999999999999999999999999999988654211 0112444556777888998874 47788888
Q ss_pred ecCCC---EEEEeeCCccCCCCCceEEeecCEEEEccCCCcCC
Q 010217 138 DAENK---KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (515)
Q Consensus 138 d~~~~---~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~ 177 (515)
..++. .|.+.++. ++.+|.||+|+|..|+.
T Consensus 221 ~~~~~~v~~v~l~dG~----------~i~aD~Vv~a~G~~p~~ 253 (415)
T 3lxd_A 221 EGDGTKVTGVRMQDGS----------VIPADIVIVGIGIVPCV 253 (415)
T ss_dssp EESSSBEEEEEESSSC----------EEECSEEEECSCCEESC
T ss_pred EecCCcEEEEEeCCCC----------EEEcCEEEECCCCccCh
Confidence 87643 34454432 79999999999998875
No 164
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.28 E-value=8.9e-07 Score=89.81 Aligned_cols=100 Identities=15% Similarity=0.265 Sum_probs=75.7
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEEE
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~ 136 (515)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+.+.. .. ....+...+.+.+++.|++++ .+..+..
T Consensus 142 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~-----~~-----~~~~~~~~l~~~l~~~GV~i~-~~~~v~~ 210 (410)
T 3ef6_A 142 SATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLV-----RV-----LGRRIGAWLRGLLTELGVQVE-LGTGVVG 210 (410)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSH-----HH-----HCHHHHHHHHHHHHHHTCEEE-CSCCEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccch-----hh-----cCHHHHHHHHHHHHHCCCEEE-eCCEEEE
Confidence 368999999999999999999999999999998865321 00 012344556777888898873 4778888
Q ss_pred EecCCC--EEEEeeCCccCCCCCceEEeecCEEEEccCCCcCC
Q 010217 137 IDAENK--KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (515)
Q Consensus 137 id~~~~--~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~ 177 (515)
++.+++ .|.+.++. ++.+|.||+|+|.+|+.
T Consensus 211 i~~~~~~~~v~~~dg~----------~i~aD~Vv~a~G~~p~~ 243 (410)
T 3ef6_A 211 FSGEGQLEQVMASDGR----------SFVADSALICVGAEPAD 243 (410)
T ss_dssp EECSSSCCEEEETTSC----------EEECSEEEECSCEEECC
T ss_pred EeccCcEEEEEECCCC----------EEEcCEEEEeeCCeecH
Confidence 887654 45555433 79999999999998864
No 165
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.27 E-value=1.7e-06 Score=88.41 Aligned_cols=97 Identities=19% Similarity=0.334 Sum_probs=76.9
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEEEE
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~i 137 (515)
.++|+|||||+.|+.+|..+++.|.+|+|+++.+.+.. . ...++...+.+.+++.|+++. .+.++..+
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~-----~------~d~~~~~~~~~~l~~~gV~i~-~~~~v~~~ 214 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINK-----L------MDADMNQPILDELDKREIPYR-LNEEINAI 214 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCST-----T------SCGGGGHHHHHHHHHTTCCEE-ESCCEEEE
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeeccccc-----c------ccchhHHHHHHHhhccceEEE-eccEEEEe
Confidence 57999999999999999999999999999998865321 1 122455667888889999984 57788888
Q ss_pred ecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCC
Q 010217 138 DAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (515)
Q Consensus 138 d~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~ 178 (515)
+. ..+.++++. .+++|.|++|+|.+|+..
T Consensus 215 ~~--~~v~~~~g~----------~~~~D~vl~a~G~~Pn~~ 243 (437)
T 4eqs_A 215 NG--NEITFKSGK----------VEHYDMIIEGVGTHPNSK 243 (437)
T ss_dssp ET--TEEEETTSC----------EEECSEEEECCCEEESCG
T ss_pred cC--CeeeecCCe----------EEeeeeEEEEeceecCcH
Confidence 74 467776543 889999999999988754
No 166
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.27 E-value=3.1e-06 Score=83.60 Aligned_cols=97 Identities=18% Similarity=0.200 Sum_probs=74.8
Q ss_pred ceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEecccccc---------------------ccc------
Q 010217 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL---------------------NMF------ 276 (515)
Q Consensus 224 ~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l---------------------~~~------ 276 (515)
.+|+|||||+.|+.+|..|.+. +.+|+++++.+.+. +.+
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~~--------------g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRRS--------------GLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQ 69 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHS--------------SCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCS
T ss_pred CCEEEECcCHHHHHHHHHHHHC--------------CCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCc
Confidence 3899999999999999999884 68999999886531 110
Q ss_pred -----cHHHHHHHHHHhhcCCeEEEcCcEEEEEeC--CeEEEEecCCCceEEEecCeEEEccCCCCcc
Q 010217 277 -----DKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGIAPHA 337 (515)
Q Consensus 277 -----~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~--~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p 337 (515)
...+.+++.+.+++.|++++++++|++++. +.+..+.+.+| ++.+|.||+|+|....|
T Consensus 70 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g---~~~~d~vV~AtG~~~~~ 134 (357)
T 4a9w_A 70 GPYPARAEVLAYLAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR---QWLARAVISATGTWGEA 134 (357)
T ss_dssp SSSCBHHHHHHHHHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC---EEEEEEEEECCCSGGGB
T ss_pred cCCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC---EEEeCEEEECCCCCCCC
Confidence 057788888889999999999999999874 34441334555 39999999999954343
No 167
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.27 E-value=1.2e-06 Score=89.87 Aligned_cols=100 Identities=14% Similarity=0.122 Sum_probs=74.5
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEEE
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~ 136 (515)
..++|+|||||+.|+.+|..|++.|.+|+|+++.+.+.. . ...++...+.+.+++.|+++. .+.++..
T Consensus 166 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-----~------~~~~~~~~l~~~l~~~Gv~i~-~~~~v~~ 233 (450)
T 1ges_A 166 LPERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLP-----S------FDPMISETLVEVMNAEGPQLH-TNAIPKA 233 (450)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-----T------SCHHHHHHHHHHHHHHSCEEE-CSCCEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhh-----h------hhHHHHHHHHHHHHHCCCEEE-eCCEEEE
Confidence 357999999999999999999999999999998765321 1 011344556777888898873 4678888
Q ss_pred EecCC-C--EEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCC
Q 010217 137 IDAEN-K--KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (515)
Q Consensus 137 id~~~-~--~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~ 178 (515)
++..+ + .+.+.++. ++.+|.||+|+|.+|+..
T Consensus 234 i~~~~~~~~~v~~~~g~----------~i~~D~vv~a~G~~p~~~ 268 (450)
T 1ges_A 234 VVKNTDGSLTLELEDGR----------SETVDCLIWAIGREPAND 268 (450)
T ss_dssp EEECTTSCEEEEETTSC----------EEEESEEEECSCEEESCT
T ss_pred EEEeCCcEEEEEECCCc----------EEEcCEEEECCCCCcCCC
Confidence 87653 2 44443322 789999999999998764
No 168
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.26 E-value=2.2e-06 Score=88.77 Aligned_cols=104 Identities=12% Similarity=0.254 Sum_probs=76.3
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEEEE
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~i 137 (515)
+++|+|||||+.|+.+|..|++.|.+|+|+++.+.+.. .+ ..++...+.+.+++.|+++. .+.++..+
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~--~~---------~~~~~~~l~~~l~~~gv~i~-~~~~v~~i 250 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGA--SM---------DGEVAKATQKFLKKQGLDFK-LSTKVISA 250 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSS--SS---------CHHHHHHHHHHHHHTTCEEE-CSEEEEEE
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcccc--cc---------CHHHHHHHHHHHHHCCCEEE-eCCEEEEE
Confidence 58999999999999999999999999999998865321 10 12444556777888998874 46788898
Q ss_pred ec--CCCE--EEEeeCCccCCCCCceEEeecCEEEEccCCCcCCC
Q 010217 138 DA--ENKK--VYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (515)
Q Consensus 138 d~--~~~~--v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~ 178 (515)
+. +++. +.+.+.. +++..++.+|.||+|+|.+|+..
T Consensus 251 ~~~~~~~~~~v~~~~~~-----~g~~~~~~~D~vv~a~G~~p~~~ 290 (478)
T 1v59_A 251 KRNDDKNVVEIVVEDTK-----TNKQENLEAEVLLVAVGRRPYIA 290 (478)
T ss_dssp EEETTTTEEEEEEEETT-----TTEEEEEEESEEEECSCEEECCT
T ss_pred EEecCCCeEEEEEEEcC-----CCCceEEECCEEEECCCCCcCCC
Confidence 86 4543 3333211 11224799999999999998765
No 169
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.24 E-value=3e-06 Score=82.57 Aligned_cols=103 Identities=21% Similarity=0.281 Sum_probs=74.6
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEEE
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~ 136 (515)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+.+.. ...+...+.+.+++.|+++ +.+.++..
T Consensus 144 ~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-------------~~~~~~~l~~~l~~~gv~i-~~~~~v~~ 209 (320)
T 1trb_A 144 RNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRA-------------EKILIKRLMDKVENGNIIL-HTNRTLEE 209 (320)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCC-------------CHHHHHHHHHHHHTSSEEE-ECSCEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCcccc-------------CHHHHHHHHHhcccCCeEE-EcCceeEE
Confidence 357999999999999999999999999999998765321 1123334555667788876 34678888
Q ss_pred EecCC-C--EEEEeeCCccCCCC-CceEEeecCEEEEccCCCcCCC
Q 010217 137 IDAEN-K--KVYCRSSQNTNLNG-KEEFCMDYDYLVIAMGARANTF 178 (515)
Q Consensus 137 id~~~-~--~v~~~~~~~~~~~~-~~~~~~~~d~lviAtG~~~~~~ 178 (515)
++.++ + .|.+.+.. + ++..++.+|.||+|+|..|+..
T Consensus 210 i~~~~~~v~~v~~~~~~-----~~g~~~~i~~D~vv~a~G~~p~~~ 250 (320)
T 1trb_A 210 VTGDQMGVTGVRLRDTQ-----NSDNIESLDVAGLFVAIGHSPNTA 250 (320)
T ss_dssp EEECSSSEEEEEEECCT-----TCCCCEEEECSEEEECSCEEESCG
T ss_pred EEcCCCceEEEEEEecc-----CCCceEEEEcCEEEEEeCCCCChH
Confidence 87665 2 25555421 1 2234799999999999988654
No 170
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.24 E-value=2.2e-06 Score=91.92 Aligned_cols=37 Identities=19% Similarity=0.349 Sum_probs=33.5
Q ss_pred CCCeEEEECCcHHHHHHHHhccC-CCCeEEEEcCCCCC
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNN-PSYDVQVISPRNYF 93 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~-~g~~V~vie~~~~~ 93 (515)
...+|+||||||+|+++|..|++ .|++|+|||+.+..
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~ 68 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGP 68 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSC
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 35799999999999999999999 99999999987643
No 171
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.24 E-value=2e-06 Score=88.70 Aligned_cols=106 Identities=18% Similarity=0.212 Sum_probs=76.2
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEEE
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~ 136 (515)
..++|+|||||+.|+.+|..|++.|.+|+|+++.+.+. +. ...++...+.+.+++.|+++ +.+.++..
T Consensus 170 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-----~~------~~~~~~~~l~~~l~~~gv~i-~~~~~v~~ 237 (464)
T 2a8x_A 170 LPKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRAL-----PN------EDADVSKEIEKQFKKLGVTI-LTATKVES 237 (464)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-----TT------SCHHHHHHHHHHHHHHTCEE-ECSCEEEE
T ss_pred cCCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccc-----cc------cCHHHHHHHHHHHHHcCCEE-EeCcEEEE
Confidence 35899999999999999999999999999999886532 11 11234445677788889887 35778888
Q ss_pred EecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCC
Q 010217 137 IDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFN 179 (515)
Q Consensus 137 id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ 179 (515)
++.+++.+.+.... +++..++.+|.||+|+|.+|+...
T Consensus 238 i~~~~~~~~v~~~~-----~g~~~~~~~D~vv~a~G~~p~~~~ 275 (464)
T 2a8x_A 238 IADGGSQVTVTVTK-----DGVAQELKAEKVLQAIGFAPNVEG 275 (464)
T ss_dssp EEECSSCEEEEEES-----SSCEEEEEESEEEECSCEEECCSS
T ss_pred EEEcCCeEEEEEEc-----CCceEEEEcCEEEECCCCCccCCC
Confidence 87655433332110 122347999999999999987643
No 172
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.23 E-value=4.4e-06 Score=81.93 Aligned_cols=103 Identities=17% Similarity=0.264 Sum_probs=75.0
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEEE
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~ 136 (515)
..++|+|||+|..|+.+|..|++.|.+|+++++.+.+... ......+.+.+++.++++ +.+.++..
T Consensus 151 ~~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~~-------------~~~~~~l~~~l~~~gv~v-~~~~~v~~ 216 (335)
T 2zbw_A 151 QGKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRAH-------------EASVKELMKAHEEGRLEV-LTPYELRR 216 (335)
T ss_dssp TTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCSC-------------HHHHHHHHHHHHTTSSEE-ETTEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCcc-------------HHHHHHHHhccccCCeEE-ecCCccee
Confidence 3579999999999999999999999999999988654211 122334566677779887 34668888
Q ss_pred EecCCC--EEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCC
Q 010217 137 IDAENK--KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (515)
Q Consensus 137 id~~~~--~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~ 178 (515)
++.+++ .|.+.... +++..++.+|.||+|+|..|+..
T Consensus 217 i~~~~~~~~v~~~~~~-----~g~~~~i~~D~vi~a~G~~p~~~ 255 (335)
T 2zbw_A 217 VEGDERVRWAVVFHNQ-----TQEELALEVDAVLILAGYITKLG 255 (335)
T ss_dssp EEESSSEEEEEEEETT-----TCCEEEEECSEEEECCCEEEECG
T ss_pred EccCCCeeEEEEEECC-----CCceEEEecCEEEEeecCCCCch
Confidence 887554 46655221 22234799999999999988653
No 173
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.23 E-value=3e-06 Score=82.82 Aligned_cols=92 Identities=15% Similarity=0.141 Sum_probs=72.6
Q ss_pred ceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEecccccc---------------cc----ccHHHHHHH
Q 010217 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL---------------NM----FDKRITAFA 284 (515)
Q Consensus 224 ~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l---------------~~----~~~~~~~~~ 284 (515)
.+|+|||||+.|+.+|..|.+. +.+|+++++.+.+. +. ...++...+
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~--------------g~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGGMR--------------QASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNL 73 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHHC--------------CCCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHH
Confidence 5899999999999999999874 68999999976432 11 135677888
Q ss_pred HHHhhcCCeEEEcCcEEEEEeCC---eEEEEecCCCceEEEecCeEEEccCC
Q 010217 285 EEKFSRDGIDVKLGSMVVKVTDK---EIFTKVRGNGETSSMPYGMVVWSTGI 333 (515)
Q Consensus 285 ~~~l~~~gV~v~~~~~v~~i~~~---~v~~~~~~~G~~~~i~~D~vi~a~G~ 333 (515)
.+.+++.|++++++++|..++.. ...+. +.+|+ +.+|.||+|+|.
T Consensus 74 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~-~~~g~---~~~d~vVlAtG~ 121 (332)
T 3lzw_A 74 KEQMAKFDQTICLEQAVESVEKQADGVFKLV-TNEET---HYSKTVIITAGN 121 (332)
T ss_dssp HHHHTTSCCEEECSCCEEEEEECTTSCEEEE-ESSEE---EEEEEEEECCTT
T ss_pred HHHHHHhCCcEEccCEEEEEEECCCCcEEEE-ECCCE---EEeCEEEECCCC
Confidence 88889999999999999999743 23333 34554 899999999995
No 174
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.22 E-value=5.3e-06 Score=80.37 Aligned_cols=98 Identities=20% Similarity=0.292 Sum_probs=71.3
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhh-cCceEEEEEeEEE
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRK-KNVDICFWEAECF 135 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~i~v~~~~~~v~ 135 (515)
..++|+|||+|+.|+.+|..|+..+.+|+++++.+.+... ..+.+.+.+ .++++ +.+.++.
T Consensus 143 ~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~-----------------~~~~~~l~~~~gv~v-~~~~~v~ 204 (310)
T 1fl2_A 143 KGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKAD-----------------QVLQDKLRSLKNVDI-ILNAQTT 204 (310)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCCSC-----------------HHHHHHHHTCTTEEE-ESSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccCcc-----------------HHHHHHHhhCCCeEE-ecCCceE
Confidence 3579999999999999999999999999999988654210 123344555 58776 3467888
Q ss_pred EEecCCC---EEEEeeCCccCCCCCceEEeecCEEEEccCCCcCC
Q 010217 136 KIDAENK---KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (515)
Q Consensus 136 ~id~~~~---~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~ 177 (515)
.++.++. .+.+.+.. +++..++.+|.||+|+|..|+.
T Consensus 205 ~i~~~~~~v~~v~~~~~~-----~g~~~~i~~D~vi~a~G~~p~~ 244 (310)
T 1fl2_A 205 EVKGDGSKVVGLEYRDRV-----SGDIHNIELAGIFVQIGLLPNT 244 (310)
T ss_dssp EEEESSSSEEEEEEEETT-----TCCEEEEECSEEEECSCEEESC
T ss_pred EEEcCCCcEEEEEEEECC-----CCcEEEEEcCEEEEeeCCccCc
Confidence 8876543 45665422 2334579999999999998865
No 175
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.22 E-value=2.3e-06 Score=88.44 Aligned_cols=106 Identities=16% Similarity=0.183 Sum_probs=75.8
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEEE
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~ 136 (515)
.+++|+|||||+.|+.+|..|++.|.+|+|+++.+.+... . ...++...+.+.+++.|+++. .+.++..
T Consensus 177 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-~---------~~~~~~~~l~~~l~~~Gv~i~-~~~~v~~ 245 (474)
T 1zmd_A 177 VPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGV-G---------IDMEISKNFQRILQKQGFKFK-LNTKVTG 245 (474)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCS-S---------CCHHHHHHHHHHHHHTTCEEE-CSEEEEE
T ss_pred cCceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCc-c---------cCHHHHHHHHHHHHHCCCEEE-eCceEEE
Confidence 3579999999999999999999999999999988653210 0 112344556778888998873 5778999
Q ss_pred EecCCCE-EEEe--eCCccCCCCCceEEeecCEEEEccCCCcCCC
Q 010217 137 IDAENKK-VYCR--SSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (515)
Q Consensus 137 id~~~~~-v~~~--~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~ 178 (515)
++.+++. +.+. +.. .++..++.+|.||+|+|.+|+..
T Consensus 246 i~~~~~~~~~v~~~~~~-----~~~~~~i~~D~vv~a~G~~p~~~ 285 (474)
T 1zmd_A 246 ATKKSDGKIDVSIEAAS-----GGKAEVITCDVLLVCIGRRPFTK 285 (474)
T ss_dssp EEECTTSCEEEEEEETT-----SCCCEEEEESEEEECSCEEECCT
T ss_pred EEEcCCceEEEEEEecC-----CCCceEEEcCEEEECcCCCcCCC
Confidence 9866532 3332 100 11123789999999999998764
No 176
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.22 E-value=9e-06 Score=81.36 Aligned_cols=98 Identities=17% Similarity=0.235 Sum_probs=74.5
Q ss_pred ceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccccc-----------------------------
Q 010217 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN----------------------------- 274 (515)
Q Consensus 224 ~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~----------------------------- 274 (515)
.+|+|||||++|+.+|..|.+. |.+|+|+++.+.+..
T Consensus 12 ~dVvIVGaG~aGl~~A~~L~~~--------------G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~ 77 (379)
T 3alj_A 12 RRAEVAGGGFAGLTAAIALKQN--------------GWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSH 77 (379)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--------------TCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCB
T ss_pred CeEEEECCCHHHHHHHHHHHHC--------------CCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCC
Confidence 4899999999999999999985 689999988764321
Q ss_pred ---------------cc-----------cHHHHHHHHHHhhcCCeEEEcCcEEEEEeCCeEEEEecCCCceEEEecCeEE
Q 010217 275 ---------------MF-----------DKRITAFAEEKFSRDGIDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVV 328 (515)
Q Consensus 275 ---------------~~-----------~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~v~~~~~~~G~~~~i~~D~vi 328 (515)
.+ ...+.+.+.+.+.+.||+++++++|++++.++ .+. ..+|++ +.+|.||
T Consensus 78 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~-~v~-~~~g~~--~~ad~vV 153 (379)
T 3alj_A 78 TPPTYETWMHNKSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADPVG-RLT-LQTGEV--LEADLIV 153 (379)
T ss_dssp CCSCEEEEETTEEEEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEETTT-EEE-ETTSCE--EECSEEE
T ss_pred CccceEEEeCCceeeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEeCC-EEE-ECCCCE--EEcCEEE
Confidence 00 03456667777888899999999999998655 443 356764 9999999
Q ss_pred EccCCCCccchHH
Q 010217 329 WSTGIAPHAIIKD 341 (515)
Q Consensus 329 ~a~G~~~~p~~~~ 341 (515)
.|+|. .+.+..
T Consensus 154 ~AdG~--~s~vr~ 164 (379)
T 3alj_A 154 GADGV--GSKVRD 164 (379)
T ss_dssp ECCCT--TCHHHH
T ss_pred ECCCc--cHHHHH
Confidence 99994 554433
No 177
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.21 E-value=2e-06 Score=86.99 Aligned_cols=99 Identities=20% Similarity=0.313 Sum_probs=74.3
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEEEE
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~i 137 (515)
.++|+|||+|+.|+.+|..|...|.+|+++++.+.+.... ....+...+.+.+++.|++++ .+..|..+
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~----------~~~~~~~~l~~~l~~~GV~i~-~~~~v~~i 210 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARV----------VTPEISSYFHDRHSGAGIRMH-YGVRATEI 210 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTT----------SCHHHHHHHHHHHHHTTCEEE-CSCCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhc----------cCHHHHHHHHHHHHhCCcEEE-ECCEEEEE
Confidence 5799999999999999999999999999999886542110 112344556777888998874 46688888
Q ss_pred ecCCCE---EEEeeCCccCCCCCceEEeecCEEEEccCCCcCC
Q 010217 138 DAENKK---VYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (515)
Q Consensus 138 d~~~~~---v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~ 177 (515)
..++.. |.+.++. ++.+|.||+|+|..|+.
T Consensus 211 ~~~~~~v~~V~~~dG~----------~i~aD~Vv~a~G~~p~~ 243 (404)
T 3fg2_P 211 AAEGDRVTGVVLSDGN----------TLPCDLVVVGVGVIPNV 243 (404)
T ss_dssp EEETTEEEEEEETTSC----------EEECSEEEECCCEEECC
T ss_pred EecCCcEEEEEeCCCC----------EEEcCEEEECcCCccCH
Confidence 765443 4444332 79999999999998865
No 178
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.21 E-value=3.4e-06 Score=87.82 Aligned_cols=100 Identities=17% Similarity=0.306 Sum_probs=74.4
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEEEE
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~i 137 (515)
.++|+|||||+.|+.+|..|++.|.+|+|+++.+.+. +. ...++...+.+.+++.|+++. .+.++..+
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-----~~------~d~~~~~~l~~~l~~~gv~i~-~~~~v~~i 243 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRIL-----RK------FDESVINVLENDMKKNNINIV-TFADVVEI 243 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSC-----TT------SCHHHHHHHHHHHHHTTCEEE-CSCCEEEE
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccC-----cc------cchhhHHHHHHHHHhCCCEEE-ECCEEEEE
Confidence 6799999999999999999999999999999876532 11 012344556778888998873 57788888
Q ss_pred ecCC-C--EEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCC
Q 010217 138 DAEN-K--KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (515)
Q Consensus 138 d~~~-~--~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~ 178 (515)
+..+ + .+.+.++. . .+.+|.||+|+|.+|+..
T Consensus 244 ~~~~~~~~~v~~~~g~--------~-~~~~D~vi~a~G~~p~~~ 278 (500)
T 1onf_A 244 KKVSDKNLSIHLSDGR--------I-YEHFDHVIYCVGRSPDTE 278 (500)
T ss_dssp EESSTTCEEEEETTSC--------E-EEEESEEEECCCBCCTTT
T ss_pred EEcCCceEEEEECCCc--------E-EEECCEEEECCCCCcCCC
Confidence 7643 2 34443321 1 389999999999998763
No 179
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.21 E-value=5.7e-06 Score=86.44 Aligned_cols=108 Identities=17% Similarity=0.242 Sum_probs=78.8
Q ss_pred ceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccc-------------------------------
Q 010217 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHI------------------------------- 272 (515)
Q Consensus 224 ~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~------------------------------- 272 (515)
.+|+|||+|+.|+.+|..|++. |.+|+|+++.+.+
T Consensus 108 ~DVVIVGgGpaGL~aA~~La~~--------------G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~ 173 (549)
T 3nlc_A 108 ERPIVIGFGPCGLFAGLVLAQM--------------GFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGT 173 (549)
T ss_dssp CCCEEECCSHHHHHHHHHHHHT--------------TCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGT
T ss_pred CCEEEECcCHHHHHHHHHHHHC--------------CCeEEEEEccCcccccccchhcccccccccccccceeccCCccc
Confidence 5899999999999999999984 6899999987432
Q ss_pred -----c------ccc------------------------------cHHHHHHHHHHhhcCCeEEEcCcEEEEEeC--CeE
Q 010217 273 -----L------NMF------------------------------DKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEI 309 (515)
Q Consensus 273 -----l------~~~------------------------------~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~--~~v 309 (515)
+ +.+ ...+.+.+.+.+++.||+++++++|+++.. +.+
T Consensus 174 ~sdgkl~~~i~~~~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v 253 (549)
T 3nlc_A 174 FSDGKLYSQVKDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQI 253 (549)
T ss_dssp TSCCCCCCCSCCTTCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBE
T ss_pred ccCCceEEEeccccccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEE
Confidence 0 000 134556677778889999999999999863 345
Q ss_pred EEEecCCCceEEEecCeEEEccCCCCccchHHHHHHhCC
Q 010217 310 FTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ 348 (515)
Q Consensus 310 ~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~~~ 348 (515)
..+.+.+|++ +.||.||+|+|....... .++...++
T Consensus 254 ~gV~l~~G~~--i~Ad~VVlA~G~~s~~~~-~~l~~~Gi 289 (549)
T 3nlc_A 254 TGVTLSNGEE--IKSRHVVLAVGHSARDTF-EMLHERGV 289 (549)
T ss_dssp EEEEETTSCE--EECSCEEECCCTTCHHHH-HHHHHTTC
T ss_pred EEEEECCCCE--EECCEEEECCCCChhhHH-HHHHHcCC
Confidence 5455567774 999999999995332222 34566665
No 180
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.21 E-value=2.2e-06 Score=87.48 Aligned_cols=100 Identities=18% Similarity=0.308 Sum_probs=73.1
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEEE
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~ 136 (515)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+.+... ....++...+.+.+++.|+++. .+.++..
T Consensus 148 ~~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~----------~~~~~~~~~l~~~l~~~GV~i~-~~~~v~~ 216 (431)
T 1q1r_A 148 ADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLER----------VTAPPVSAFYEHLHREAGVDIR-TGTQVCG 216 (431)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTT----------TSCHHHHHHHHHHHHHHTCEEE-CSCCEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccc----------hhhHHHHHHHHHHHHhCCeEEE-eCCEEEE
Confidence 3689999999999999999999999999999987653211 0112334456677888898873 4668888
Q ss_pred Eec--CC-C--EEEEeeCCccCCCCCceEEeecCEEEEccCCCcCC
Q 010217 137 IDA--EN-K--KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (515)
Q Consensus 137 id~--~~-~--~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~ 177 (515)
++. .+ + .|.+.++. .+.+|.||+|+|.+|+.
T Consensus 217 i~~~~~~~~v~~v~~~~G~----------~i~~D~Vv~a~G~~p~~ 252 (431)
T 1q1r_A 217 FEMSTDQQKVTAVLCEDGT----------RLPADLVIAGIGLIPNC 252 (431)
T ss_dssp EEECTTTCCEEEEEETTSC----------EEECSEEEECCCEEECC
T ss_pred EEeccCCCcEEEEEeCCCC----------EEEcCEEEECCCCCcCc
Confidence 875 33 3 34443322 78999999999998764
No 181
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.20 E-value=2.1e-06 Score=88.14 Aligned_cols=63 Identities=17% Similarity=0.288 Sum_probs=46.3
Q ss_pred HHHHHHHHHHhhcCCeEEEcCcEEEEEeC----------------C-eEEEEecCCCceEEE--ecCeEEEccCCCCccc
Q 010217 278 KRITAFAEEKFSRDGIDVKLGSMVVKVTD----------------K-EIFTKVRGNGETSSM--PYGMVVWSTGIAPHAI 338 (515)
Q Consensus 278 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~----------------~-~v~~~~~~~G~~~~i--~~D~vi~a~G~~~~p~ 338 (515)
..+...+.+.+++.|++++.+++|+++.. + ++..+.+.+|+ + .+|.||+|+|. +
T Consensus 181 ~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g~---i~~~Ad~VV~AtG~----~ 253 (448)
T 3axb_A 181 EKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDGT---RVEVGEKLVVAAGV----W 253 (448)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTSC---EEEEEEEEEECCGG----G
T ss_pred HHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCCE---EeecCCEEEECCCc----C
Confidence 46777888888999999999999999863 2 34334445663 7 99999999993 3
Q ss_pred hHHHHHHhC
Q 010217 339 IKDFMKQVG 347 (515)
Q Consensus 339 ~~~l~~~~~ 347 (515)
...++..++
T Consensus 254 s~~l~~~~g 262 (448)
T 3axb_A 254 SNRLLNPLG 262 (448)
T ss_dssp HHHHHGGGT
T ss_pred HHHHHHHcC
Confidence 335666554
No 182
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.20 E-value=5.4e-06 Score=87.00 Aligned_cols=37 Identities=27% Similarity=0.347 Sum_probs=33.2
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCc
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFA 94 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~ 94 (515)
...||||||||+||++||+.|++ |.+|+|+|+.+..+
T Consensus 7 ~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~ 43 (540)
T 1chu_A 7 HSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTE 43 (540)
T ss_dssp EECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC
T ss_pred CCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCC
Confidence 35799999999999999999999 99999999986543
No 183
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.20 E-value=7.5e-06 Score=79.75 Aligned_cols=98 Identities=20% Similarity=0.243 Sum_probs=72.0
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEEEE
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~i 137 (515)
.++|+|||+|+.|+.+|..|.+.+.+|+++++.+.+.. ...+.+.+.+.|+++ +.+.++..+
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~~-----------------~~~l~~~l~~~gv~i-~~~~~v~~i 216 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYMC-----------------ENAYVQEIKKRNIPY-IMNAQVTEI 216 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCCS-----------------CHHHHHHHHHTTCCE-ECSEEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccCC-----------------CHHHHHHHhcCCcEE-EcCCeEEEE
Confidence 47999999999999999999999999999998765321 012344555788887 457788888
Q ss_pred ecCCC---EEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCC
Q 010217 138 DAENK---KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (515)
Q Consensus 138 d~~~~---~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~ 178 (515)
+.++. .+.+.+.. +++...+.+|.||+|+|..|+..
T Consensus 217 ~~~~~~v~~v~~~~~~-----~g~~~~i~~D~vi~a~G~~p~~~ 255 (319)
T 3cty_A 217 VGDGKKVTGVKYKDRT-----TGEEKLIETDGVFIYVGLIPQTS 255 (319)
T ss_dssp EESSSSEEEEEEEETT-----TCCEEEECCSEEEECCCEEECCG
T ss_pred ecCCceEEEEEEEEcC-----CCceEEEecCEEEEeeCCccChH
Confidence 87654 45555311 22234799999999999988753
No 184
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.19 E-value=1.1e-06 Score=89.59 Aligned_cols=94 Identities=21% Similarity=0.316 Sum_probs=67.7
Q ss_pred ceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEecccccc--ccccH---------HHHHHHHHHhhcCC
Q 010217 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL--NMFDK---------RITAFAEEKFSRDG 292 (515)
Q Consensus 224 ~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l--~~~~~---------~~~~~~~~~l~~~g 292 (515)
|+|||||||+.|+.+|..|++++ ++.+||||++.+... |.+.. ++...+.+.+++.|
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~------------~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~~~~~g 70 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLM------------PDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFN 70 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHC------------TTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGT
T ss_pred CcEEEECCCHHHHHHHHHHhccC------------cCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHHHHHCC
Confidence 58999999999999999998764 357999999987642 11111 11111234566789
Q ss_pred eEEEcCcEEEEEeCCeEEEEecCCCceEEEecCeEEEccCC
Q 010217 293 IDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGI 333 (515)
Q Consensus 293 V~v~~~~~v~~i~~~~v~~~~~~~G~~~~i~~D~vi~a~G~ 333 (515)
|+++.+ ++++|+.+.-++. +.+|++ +++|.+|+|||.
T Consensus 71 v~~i~~-~v~~Id~~~~~V~-~~~g~~--i~YD~LViAtG~ 107 (430)
T 3hyw_A 71 IEFINE-KAESIDPDANTVT-TQSGKK--IEYDYLVIATGP 107 (430)
T ss_dssp EEEECS-CEEEEETTTTEEE-ETTCCE--EECSEEEECCCC
T ss_pred cEEEEe-EEEEEECCCCEEE-ECCCCE--EECCEEEEeCCC
Confidence 999876 6899986543333 356775 999999999995
No 185
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.19 E-value=8.3e-06 Score=79.89 Aligned_cols=99 Identities=15% Similarity=0.232 Sum_probs=72.1
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhh-cCceEEEEEeEEE
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRK-KNVDICFWEAECF 135 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~i~v~~~~~~v~ 135 (515)
..++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.. ...+...+.+ .|+++ +.+..+.
T Consensus 172 ~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~-----------------~~~~~~~l~~~~gv~i-~~~~~v~ 233 (338)
T 3itj_A 172 RNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA-----------------STIMQKRAEKNEKIEI-LYNTVAL 233 (338)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS-----------------CHHHHHHHHHCTTEEE-ECSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC-----------------CHHHHHHHHhcCCeEE-eecceeE
Confidence 457999999999999999999999999999998865321 1123334444 48776 3467888
Q ss_pred EEecCCC---EEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCC
Q 010217 136 KIDAENK---KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (515)
Q Consensus 136 ~id~~~~---~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~ 178 (515)
.++.+++ .|.+.+.. .++..++.+|.||+|+|..|+..
T Consensus 234 ~i~~~~~~~~~v~~~~~~-----~g~~~~i~~D~vi~a~G~~p~~~ 274 (338)
T 3itj_A 234 EAKGDGKLLNALRIKNTK-----KNEETDLPVSGLFYAIGHTPATK 274 (338)
T ss_dssp EEEESSSSEEEEEEEETT-----TTEEEEEECSEEEECSCEEECCG
T ss_pred EEEcccCcEEEEEEEECC-----CCceEEEEeCEEEEEeCCCCChh
Confidence 8887664 35665522 23335899999999999988654
No 186
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.19 E-value=2.4e-06 Score=88.32 Aligned_cols=106 Identities=18% Similarity=0.261 Sum_probs=77.1
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEEE
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~ 136 (515)
..++|+|||||+.|+.+|..|++.|.+|+|+++.+.+.. . ...++...+.+.+++.|+++ +.+.++..
T Consensus 176 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~-----~------~~~~~~~~l~~~l~~~gv~i-~~~~~v~~ 243 (470)
T 1dxl_A 176 IPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVP-----T------MDAEIRKQFQRSLEKQGMKF-KLKTKVVG 243 (470)
T ss_dssp CCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSST-----T------SCHHHHHHHHHHHHHSSCCE-ECSEEEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc-----c------ccHHHHHHHHHHHHHcCCEE-EeCCEEEE
Confidence 358999999999999999999999999999998865321 1 11234455677788899987 35778999
Q ss_pred EecCCC--EEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCC
Q 010217 137 IDAENK--KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFN 179 (515)
Q Consensus 137 id~~~~--~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ 179 (515)
++.+++ .+.+.+.. +++..++.+|.||+|+|.+|+...
T Consensus 244 i~~~~~~~~v~~~~~~-----~g~~~~~~~D~vv~a~G~~p~~~~ 283 (470)
T 1dxl_A 244 VDTSGDGVKLTVEPSA-----GGEQTIIEADVVLVSAGRTPFTSG 283 (470)
T ss_dssp EECSSSSEEEEEEESS-----SCCCEEEEESEEECCCCEEECCTT
T ss_pred EEEcCCeEEEEEEecC-----CCcceEEECCEEEECCCCCcCCCC
Confidence 987653 33443210 111237999999999999987643
No 187
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.18 E-value=2.8e-06 Score=88.27 Aligned_cols=101 Identities=18% Similarity=0.328 Sum_probs=74.9
Q ss_pred CCCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEE
Q 010217 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECF 135 (515)
Q Consensus 56 ~~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~ 135 (515)
...++|+|||||+.|+.+|..|++.|.+|+|+++.+.+... ....++...+.+.+++.|+++. .+.++.
T Consensus 192 ~~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~----------~~~~~~~~~l~~~l~~~GV~i~-~~~~v~ 260 (490)
T 2bc0_A 192 KDIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAG----------YYDRDLTDLMAKNMEEHGIQLA-FGETVK 260 (490)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT----------TSCHHHHHHHHHHHHTTTCEEE-ETCCEE
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhh----------HHHHHHHHHHHHHHHhCCeEEE-eCCEEE
Confidence 34689999999999999999999999999999988653210 0112344556777888998873 567888
Q ss_pred EEecCCC--EEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCC
Q 010217 136 KIDAENK--KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (515)
Q Consensus 136 ~id~~~~--~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~ 178 (515)
.++.+++ .+.+ ++. ++.+|.||+|+|.+|+..
T Consensus 261 ~i~~~~~v~~v~~-~g~----------~i~~D~Vi~a~G~~p~~~ 294 (490)
T 2bc0_A 261 EVAGNGKVEKIIT-DKN----------EYDVDMVILAVGFRPNTT 294 (490)
T ss_dssp EEECSSSCCEEEE-SSC----------EEECSEEEECCCEEECCG
T ss_pred EEEcCCcEEEEEE-CCc----------EEECCEEEECCCCCcChH
Confidence 8886443 2333 221 799999999999988754
No 188
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.18 E-value=1.6e-06 Score=86.57 Aligned_cols=94 Identities=17% Similarity=0.344 Sum_probs=71.9
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEEEE
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~i 137 (515)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+.. ...++...+.+.+++.|+++. .+.++..+
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------------~~~~~~~~l~~~l~~~gV~i~-~~~~v~~i 209 (367)
T 1xhc_A 143 SGEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG------------LDEELSNMIKDMLEETGVKFF-LNSELLEA 209 (367)
T ss_dssp HSEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT------------CCHHHHHHHHHHHHHTTEEEE-CSCCEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc------------CCHHHHHHHHHHHHHCCCEEE-cCCEEEEE
Confidence 37999999999999999999999999999998865321 112444556777888998873 46688888
Q ss_pred ecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCC
Q 010217 138 DAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (515)
Q Consensus 138 d~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~ 177 (515)
+. ..+.+.+ + ++++|.||+|+|.+|+.
T Consensus 210 ~~--~~v~~~~--------g---~i~~D~vi~a~G~~p~~ 236 (367)
T 1xhc_A 210 NE--EGVLTNS--------G---FIEGKVKICAIGIVPNV 236 (367)
T ss_dssp CS--SEEEETT--------E---EEECSCEEEECCEEECC
T ss_pred Ee--eEEEECC--------C---EEEcCEEEECcCCCcCH
Confidence 73 3565532 2 28999999999998875
No 189
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.18 E-value=1.4e-06 Score=90.22 Aligned_cols=104 Identities=15% Similarity=0.195 Sum_probs=74.8
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEEE
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~ 136 (515)
..++|+|||||+.|+.+|..|++.|.+|+|+++.+.+.. . ...++...+.+.+++.|+++. .+.++..
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~-----~------~~~~~~~~l~~~l~~~gV~i~-~~~~v~~ 251 (482)
T 1ojt_A 184 VPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQ-----G------ADRDLVKVWQKQNEYRFDNIM-VNTKTVA 251 (482)
T ss_dssp CCSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSST-----T------SCHHHHHHHHHHHGGGEEEEE-CSCEEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc-----c------cCHHHHHHHHHHHHhcCCEEE-ECCEEEE
Confidence 368999999999999999999999999999998865321 1 112344556777888888773 4678888
Q ss_pred EecCCCE--EEEeeCCccCCCCCceEEeecCEEEEccCCCcCCC
Q 010217 137 IDAENKK--VYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (515)
Q Consensus 137 id~~~~~--v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~ 178 (515)
++.+++. +.+.+.. ..++ ++.+|.||+|+|.+|+..
T Consensus 252 i~~~~~~~~v~~~~~~----~~g~--~~~~D~vv~a~G~~p~~~ 289 (482)
T 1ojt_A 252 VEPKEDGVYVTFEGAN----APKE--PQRYDAVLVAAGRAPNGK 289 (482)
T ss_dssp EEEETTEEEEEEESSS----CCSS--CEEESCEEECCCEEECGG
T ss_pred EEEcCCeEEEEEeccC----CCce--EEEcCEEEECcCCCcCCC
Confidence 8765543 4444300 0011 578999999999998753
No 190
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.18 E-value=3.2e-06 Score=88.85 Aligned_cols=34 Identities=24% Similarity=0.314 Sum_probs=31.9
Q ss_pred CCeEEEECCcHHHHHHHHhccC---CCCeEEEEcCCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNN---PSYDVQVISPRN 91 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~---~g~~V~vie~~~ 91 (515)
.++|||||||++|+++|..|++ .|++|+|||+..
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 41 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAA 41 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCC
Confidence 5799999999999999999998 999999999864
No 191
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.18 E-value=2.4e-06 Score=89.33 Aligned_cols=102 Identities=18% Similarity=0.174 Sum_probs=77.6
Q ss_pred CCCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEE
Q 010217 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECF 135 (515)
Q Consensus 56 ~~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~ 135 (515)
..+++++|||||+.|+..|..+++.|.+|||+++...+ +.. ..++...+...+++.|++++ ....+.
T Consensus 221 ~lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L------~~~------D~ei~~~l~~~l~~~gi~~~-~~~~v~ 287 (542)
T 4b1b_A 221 KDPGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVL------RGF------DQQCAVKVKLYMEEQGVMFK-NGILPK 287 (542)
T ss_dssp SCCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSS------TTS------CHHHHHHHHHHHHHTTCEEE-ETCCEE
T ss_pred cCCceEEEECCCHHHHHHHHHHHhcCCeEEEecccccc------ccc------chhHHHHHHHHHHhhcceee-cceEEE
Confidence 34689999999999999999999999999999865321 111 22555667888899998874 567788
Q ss_pred EEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCC
Q 010217 136 KIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (515)
Q Consensus 136 ~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~ 178 (515)
.+...+..+.+.... +. .+.+|.|++|+|-+|+..
T Consensus 288 ~~~~~~~~~~v~~~~-----~~---~~~~D~vLvAvGR~Pnt~ 322 (542)
T 4b1b_A 288 KLTKMDDKILVEFSD-----KT---SELYDTVLYAIGRKGDID 322 (542)
T ss_dssp EEEEETTEEEEEETT-----SC---EEEESEEEECSCEEESCG
T ss_pred EEEecCCeEEEEEcC-----CC---eEEEEEEEEcccccCCcc
Confidence 888777766655432 11 678999999999998864
No 192
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.18 E-value=3.2e-06 Score=87.12 Aligned_cols=102 Identities=15% Similarity=0.268 Sum_probs=74.1
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEEEE
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~i 137 (515)
.++|+|||||+.|+.+|..|++.|.+|+|+++.+.+.. . . ..++...+.+.+++.|+++. .+.++..+
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~-----~-----~-~~~~~~~l~~~l~~~gv~i~-~~~~v~~i 233 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLF-----Q-----F-DPLLSATLAENMHAQGIETH-LEFAVAAL 233 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-----T-----S-CHHHHHHHHHHHHHTTCEEE-SSCCEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcccc-----c-----c-CHHHHHHHHHHHHHCCCEEE-eCCEEEEE
Confidence 57999999999999999999999999999998865321 1 0 11334456677888898873 46678888
Q ss_pred ecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCC
Q 010217 138 DAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (515)
Q Consensus 138 d~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~ 178 (515)
+.++..+.+... +++. ++.+|.||+|+|.+|+..
T Consensus 234 ~~~~~~~~v~~~------~G~~-~i~~D~vv~a~G~~p~~~ 267 (463)
T 2r9z_A 234 ERDAQGTTLVAQ------DGTR-LEGFDSVIWAVGRAPNTR 267 (463)
T ss_dssp EEETTEEEEEET------TCCE-EEEESEEEECSCEEESCT
T ss_pred EEeCCeEEEEEe------CCcE-EEEcCEEEECCCCCcCCC
Confidence 765433433321 2212 689999999999998764
No 193
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.18 E-value=9.9e-06 Score=83.44 Aligned_cols=105 Identities=13% Similarity=0.265 Sum_probs=73.7
Q ss_pred ceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcE---EEEEeccccccc--------------------------
Q 010217 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVK---ITLLEAADHILN-------------------------- 274 (515)
Q Consensus 224 ~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~---Vtlv~~~~~~l~-------------------------- 274 (515)
++|+|||||+.|+.+|..|.+... .+.+ |+++++.+.+..
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~-----------~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~ 71 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQE-----------KGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLW 71 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHH-----------TTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCB
T ss_pred CcEEEECccHHHHHHHHHHHhhhh-----------cCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchh
Confidence 489999999999999999987210 1567 999998764310
Q ss_pred -----------cc---------------cHHHHHHHHHHhhcCCeE--EEcCcEEEEEeC--C----eEEEEecCCCceE
Q 010217 275 -----------MF---------------DKRITAFAEEKFSRDGID--VKLGSMVVKVTD--K----EIFTKVRGNGETS 320 (515)
Q Consensus 275 -----------~~---------------~~~~~~~~~~~l~~~gV~--v~~~~~v~~i~~--~----~v~~~~~~~G~~~ 320 (515)
.+ ...+.+++.+.+++.|++ ++++++|+.++. + .+++....+|+..
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~ 151 (464)
T 2xve_A 72 SNGPKECLEFADYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIY 151 (464)
T ss_dssp CSSCGGGTCBTTBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEE
T ss_pred hcCChhhcccCCCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceE
Confidence 00 134566777777888998 999999999963 3 2333332346445
Q ss_pred EEecCeEEEccCCCCccch
Q 010217 321 SMPYGMVVWSTGIAPHAII 339 (515)
Q Consensus 321 ~i~~D~vi~a~G~~~~p~~ 339 (515)
++.+|.||+|+|....|..
T Consensus 152 ~~~~d~VVvAtG~~s~p~~ 170 (464)
T 2xve_A 152 SEEFDYVVCCTGHFSTPYV 170 (464)
T ss_dssp EEEESEEEECCCSSSSBCC
T ss_pred EEEcCEEEECCCCCCCCcc
Confidence 6899999999995445543
No 194
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.17 E-value=2.6e-06 Score=90.68 Aligned_cols=99 Identities=18% Similarity=0.371 Sum_probs=77.3
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEEE
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~ 136 (515)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+.+... ...++...+.+.+++.|+++. .+..|..
T Consensus 186 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-----------~~~~~~~~l~~~l~~~GV~i~-~~~~v~~ 253 (588)
T 3ics_A 186 KPRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPP-----------IDYEMAAYVHEHMKNHDVELV-FEDGVDA 253 (588)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-----------SCHHHHHHHHHHHHHTTCEEE-CSCCEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccccc-----------CCHHHHHHHHHHHHHcCCEEE-ECCeEEE
Confidence 3579999999999999999999999999999987643211 112444556777888998873 4678999
Q ss_pred EecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCC
Q 010217 137 IDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (515)
Q Consensus 137 id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~ 177 (515)
++...+.|.+.++. ++.+|.||+|+|.+|+.
T Consensus 254 i~~~~~~v~~~~g~----------~i~~D~Vi~a~G~~p~~ 284 (588)
T 3ics_A 254 LEENGAVVRLKSGS----------VIQTDMLILAIGVQPES 284 (588)
T ss_dssp EEGGGTEEEETTSC----------EEECSEEEECSCEEECC
T ss_pred EecCCCEEEECCCC----------EEEcCEEEEccCCCCCh
Confidence 98766677776433 79999999999998865
No 195
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.16 E-value=9.6e-06 Score=79.20 Aligned_cols=99 Identities=23% Similarity=0.239 Sum_probs=70.4
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEEEE
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~i 137 (515)
.++|+|||+|+.|+.+|..|.+.+.+|+++++.+.+... ..+ ...+.+..++++ +.+.++..+
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~-------------~~~---~~~l~~~~gv~i-~~~~~v~~i 214 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLRAN-------------KVA---QARAFANPKMKF-IWDTAVEEI 214 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCSC-------------HHH---HHHHHTCTTEEE-ECSEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCCcc-------------hHH---HHHHHhcCCceE-ecCCceEEE
Confidence 579999999999999999999999999999987653210 011 223334458776 346788888
Q ss_pred ecCCC--EEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCC
Q 010217 138 DAENK--KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (515)
Q Consensus 138 d~~~~--~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~ 178 (515)
+.+++ .|.+.+.. +++..++.+|.||+|+|..|+..
T Consensus 215 ~~~~~v~~v~~~~~~-----~g~~~~i~~D~vi~a~G~~p~~~ 252 (325)
T 2q7v_A 215 QGADSVSGVKLRNLK-----TGEVSELATDGVFIFIGHVPNTA 252 (325)
T ss_dssp EESSSEEEEEEEETT-----TCCEEEEECSEEEECSCEEESCG
T ss_pred ccCCcEEEEEEEECC-----CCcEEEEEcCEEEEccCCCCChH
Confidence 87554 45555311 22335789999999999988753
No 196
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.16 E-value=2.6e-06 Score=88.29 Aligned_cols=101 Identities=14% Similarity=0.213 Sum_probs=74.5
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEEE
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~ 136 (515)
..++|+|||||+.|+.+|..|++.|.+|+|+++.+.+.. . ...++...+.+.+++.|+++. .+.++..
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~--~---------~~~~~~~~l~~~l~~~Gv~i~-~~~~v~~ 252 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGT--I---------YDGDMAEYIYKEADKHHIEIL-TNENVKA 252 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTS--S---------SCHHHHHHHHHHHHHTTCEEE-CSCCEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhh--c---------CCHHHHHHHHHHHHHcCcEEE-cCCEEEE
Confidence 468999999999999999999999999999998764321 0 112444556777888998873 4678888
Q ss_pred EecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCC
Q 010217 137 IDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (515)
Q Consensus 137 id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~ 178 (515)
++.+++...+... + .++.+|.||+|+|..|+..
T Consensus 253 i~~~~~v~~v~~~------~---~~i~~D~vi~a~G~~p~~~ 285 (480)
T 3cgb_A 253 FKGNERVEAVETD------K---GTYKADLVLVSVGVKPNTD 285 (480)
T ss_dssp EEESSBEEEEEET------T---EEEECSEEEECSCEEESCG
T ss_pred EEcCCcEEEEEEC------C---CEEEcCEEEECcCCCcChH
Confidence 8766543222221 1 1799999999999988754
No 197
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.16 E-value=5.4e-06 Score=86.09 Aligned_cols=106 Identities=15% Similarity=0.173 Sum_probs=77.7
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEEE
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~ 136 (515)
..++|+|||||+.|+.+|..|++.|.+|+++++.+.+... ...++...+.+.+++.|+++ +.+.++..
T Consensus 197 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-----------~d~~~~~~l~~~l~~~gV~v-~~~~~v~~ 264 (491)
T 3urh_A 197 VPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGG-----------MDGEVAKQLQRMLTKQGIDF-KLGAKVTG 264 (491)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSS-----------SCHHHHHHHHHHHHHTTCEE-ECSEEEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccccc-----------CCHHHHHHHHHHHHhCCCEE-EECCeEEE
Confidence 4689999999999999999999999999999988654210 11244555677788889887 35678888
Q ss_pred EecCCCEE--EEeeCCccCCCCCceEEeecCEEEEccCCCcCCCC
Q 010217 137 IDAENKKV--YCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFN 179 (515)
Q Consensus 137 id~~~~~v--~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ 179 (515)
+...+..+ .+.+.. +++..++.+|.||+|+|..|+...
T Consensus 265 i~~~~~~~~v~~~~~~-----~g~~~~i~~D~Vi~a~G~~p~~~~ 304 (491)
T 3urh_A 265 AVKSGDGAKVTFEPVK-----GGEATTLDAEVVLIATGRKPSTDG 304 (491)
T ss_dssp EEEETTEEEEEEEETT-----SCCCEEEEESEEEECCCCEECCTT
T ss_pred EEEeCCEEEEEEEecC-----CCceEEEEcCEEEEeeCCccCCCc
Confidence 87665543 444311 122348999999999999887643
No 198
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.15 E-value=8.9e-06 Score=79.66 Aligned_cols=99 Identities=15% Similarity=0.236 Sum_probs=72.1
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccch-HHHHhhcCceEEEEEeEEE
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPV-RNIVRKKNVDICFWEAECF 135 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~i~v~~~~~~v~ 135 (515)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+.+.. ...+ ..++++.|+++ +.+.++.
T Consensus 158 ~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~-----------------~~~~~~~~~~~~gv~i-~~~~~v~ 219 (333)
T 1vdc_A 158 RNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFRA-----------------SKIMQQRALSNPKIDV-IWNSSVV 219 (333)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCCS-----------------CHHHHHHHHTCTTEEE-ECSEEEE
T ss_pred CCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCCc-----------------cHHHHHHHHhCCCeeE-ecCCceE
Confidence 457999999999999999999999999999998865421 0112 24456678776 3467888
Q ss_pred EEecCC---C--EEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCC
Q 010217 136 KIDAEN---K--KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (515)
Q Consensus 136 ~id~~~---~--~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~ 178 (515)
.++.+. + .+.+.+.. +++..++.+|.||+|+|..|+..
T Consensus 220 ~i~~~~~~~~v~~v~~~~~~-----~g~~~~i~~D~vi~a~G~~p~~~ 262 (333)
T 1vdc_A 220 EAYGDGERDVLGGLKVKNVV-----TGDVSDLKVSGLFFAIGHEPATK 262 (333)
T ss_dssp EEEESSSSSSEEEEEEEETT-----TCCEEEEECSEEEECSCEEESCG
T ss_pred EEeCCCCccceeeEEEEecC-----CCceEEEecCEEEEEeCCccchH
Confidence 888765 3 36665421 22235799999999999988754
No 199
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.15 E-value=3e-06 Score=85.47 Aligned_cols=35 Identities=20% Similarity=0.332 Sum_probs=32.4
Q ss_pred CeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCC
Q 010217 59 KKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYF 93 (515)
Q Consensus 59 ~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~ 93 (515)
+||+||||||||+++|..|++.|++|+|+|+.+..
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~ 36 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAA 36 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 68999999999999999999999999999987654
No 200
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.15 E-value=5.9e-06 Score=84.85 Aligned_cols=104 Identities=16% Similarity=0.193 Sum_probs=76.7
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEEE
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~ 136 (515)
..++++|||+|+.|+.+|..|++.|.+|+++++.+.+.... ...++...+.+.+++.|+++ +.+..|..
T Consensus 146 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~----------~d~~~~~~l~~~l~~~GV~i-~~~~~v~~ 214 (452)
T 3oc4_A 146 NSQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPKY----------FDKEMVAEVQKSLEKQAVIF-HFEETVLG 214 (452)
T ss_dssp TCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT----------CCHHHHHHHHHHHHTTTEEE-EETCCEEE
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCcccccc----------CCHHHHHHHHHHHHHcCCEE-EeCCEEEE
Confidence 35899999999999999999999999999999886532110 11244555777888899887 35678888
Q ss_pred EecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCCC
Q 010217 137 IDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNT 180 (515)
Q Consensus 137 id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~i 180 (515)
++..+..+.+... ++ ++.+|.||+|+|.+|+...+
T Consensus 215 i~~~~~~v~v~~~------~g---~i~aD~Vv~A~G~~p~~~~l 249 (452)
T 3oc4_A 215 IEETANGIVLETS------EQ---EISCDSGIFALNLHPQLAYL 249 (452)
T ss_dssp EEECSSCEEEEES------SC---EEEESEEEECSCCBCCCSSC
T ss_pred EEccCCeEEEEEC------CC---EEEeCEEEECcCCCCChHHH
Confidence 8854444444331 22 78999999999999876543
No 201
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.15 E-value=5.4e-06 Score=85.72 Aligned_cols=103 Identities=21% Similarity=0.293 Sum_probs=76.7
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEEE
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~ 136 (515)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+.+.. . ...++...+.+.+++.|+++ +.+.++..
T Consensus 179 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-----~------~~~~~~~~l~~~l~~~Gv~v-~~~~~v~~ 246 (476)
T 3lad_A 179 VPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLP-----A------VDEQVAKEAQKILTKQGLKI-LLGARVTG 246 (476)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST-----T------SCHHHHHHHHHHHHHTTEEE-EETCEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCc-----c------cCHHHHHHHHHHHHhCCCEE-EECCEEEE
Confidence 467999999999999999999999999999998865321 0 11244555677788899887 35778888
Q ss_pred EecCCCE--EEEeeCCccCCCCCceEEeecCEEEEccCCCcCCC
Q 010217 137 IDAENKK--VYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (515)
Q Consensus 137 id~~~~~--v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~ 178 (515)
++.+++. +.+.++. +...+.+|.||+|+|..|+..
T Consensus 247 i~~~~~~~~v~~~~~~-------g~~~~~~D~vi~a~G~~p~~~ 283 (476)
T 3lad_A 247 TEVKNKQVTVKFVDAE-------GEKSQAFDKLIVAVGRRPVTT 283 (476)
T ss_dssp EEECSSCEEEEEESSS-------EEEEEEESEEEECSCEEECCT
T ss_pred EEEcCCEEEEEEEeCC-------CcEEEECCEEEEeeCCcccCC
Confidence 8866544 4444321 134799999999999988764
No 202
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.14 E-value=3.2e-06 Score=87.74 Aligned_cols=100 Identities=15% Similarity=0.231 Sum_probs=74.6
Q ss_pred CCCeEEEECCcHHHHHHHHhccCC---CCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeE
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNP---SYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAE 133 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~---g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~ 133 (515)
..++++|||||+.|+.+|..|++. |.+|+|+++.+.+. +. ...++...+.+.+++.|+++ +.+.+
T Consensus 186 ~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l-----~~------~d~~~~~~l~~~l~~~GV~i-~~~~~ 253 (490)
T 1fec_A 186 APKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMIL-----RG------FDSELRKQLTEQLRANGINV-RTHEN 253 (490)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSS-----TT------SCHHHHHHHHHHHHHTTEEE-EETCC
T ss_pred cCCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcc-----cc------cCHHHHHHHHHHHHhCCCEE-EeCCE
Confidence 357999999999999999999877 99999999886532 11 01244555677788899887 35778
Q ss_pred EEEEecCC-C--EEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCC
Q 010217 134 CFKIDAEN-K--KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (515)
Q Consensus 134 v~~id~~~-~--~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~ 178 (515)
|..++.++ + .|.+.++. ++.+|.||+|+|.+|+..
T Consensus 254 v~~i~~~~~~~~~v~~~~G~----------~i~~D~vv~a~G~~p~~~ 291 (490)
T 1fec_A 254 PAKVTKNADGTRHVVFESGA----------EADYDVVMLAIGRVPRSQ 291 (490)
T ss_dssp EEEEEECTTSCEEEEETTSC----------EEEESEEEECSCEEESCT
T ss_pred EEEEEEcCCCEEEEEECCCc----------EEEcCEEEEccCCCcCcc
Confidence 88887653 2 34443221 789999999999998764
No 203
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.14 E-value=5.2e-06 Score=79.71 Aligned_cols=90 Identities=9% Similarity=0.020 Sum_probs=70.3
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEEE
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~ 136 (515)
..++|+|||+|+.|+.+|..|.+.| +|+++++.+. .+...+.+.+.+.|+++. ..++..
T Consensus 140 ~~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~------------------~~~~~~~~~l~~~gv~i~--~~~v~~ 198 (297)
T 3fbs_A 140 DQGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIV------------------EPDADQHALLAARGVRVE--TTRIRE 198 (297)
T ss_dssp TTCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTC------------------CCCHHHHHHHHHTTCEEE--CSCEEE
T ss_pred cCCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCC------------------CCCHHHHHHHHHCCcEEE--cceeee
Confidence 3689999999999999999999888 9999987653 122335677888898863 478888
Q ss_pred EecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCC
Q 010217 137 IDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (515)
Q Consensus 137 id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~ 178 (515)
++.++ .+.+.++. ++.+|.||+|+|..|+.+
T Consensus 199 i~~~~-~v~~~~g~----------~~~~D~vi~a~G~~p~~~ 229 (297)
T 3fbs_A 199 IAGHA-DVVLADGR----------SIALAGLFTQPKLRITVD 229 (297)
T ss_dssp EETTE-EEEETTSC----------EEEESEEEECCEEECCCS
T ss_pred eecCC-eEEeCCCC----------EEEEEEEEEccCcccCch
Confidence 88654 66665433 789999999999987653
No 204
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.14 E-value=3.5e-06 Score=85.35 Aligned_cols=101 Identities=17% Similarity=0.270 Sum_probs=71.7
Q ss_pred ceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccccc--c---------ccHHHHHHHHHHhhcCC
Q 010217 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN--M---------FDKRITAFAEEKFSRDG 292 (515)
Q Consensus 224 ~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~--~---------~~~~~~~~~~~~l~~~g 292 (515)
++|+|||||+.|+.+|..|.+... .+.+|+|+++.+.+.. . ...++...+.+.+++.|
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~-----------~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 70 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVG-----------SKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKG 70 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHG-----------GGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGT
T ss_pred CeEEEECCCHHHHHHHHHHHhhCC-----------CCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCC
Confidence 489999999999999999987210 2589999999876421 0 11223334567778889
Q ss_pred eEEEcCcEEEEEeCC--eEEEEecCCCceEEEecCeEEEccCCCCccch
Q 010217 293 IDVKLGSMVVKVTDK--EIFTKVRGNGETSSMPYGMVVWSTGIAPHAII 339 (515)
Q Consensus 293 V~v~~~~~v~~i~~~--~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~ 339 (515)
|+++.+ +++.++.+ .+.+.. .+++..++.+|.||+|+|. .|+.
T Consensus 71 v~~~~~-~v~~i~~~~~~V~~~~-g~~~~~~~~~d~lViAtG~--~~~~ 115 (409)
T 3h8l_A 71 IQFQEG-TVEKIDAKSSMVYYTK-PDGSMAEEEYDYVIVGIGA--HLAT 115 (409)
T ss_dssp CEEEEC-EEEEEETTTTEEEEEC-TTSCEEEEECSEEEECCCC--EECG
T ss_pred eEEEEe-eEEEEeCCCCEEEEcc-CCcccceeeCCEEEECCCC--CcCc
Confidence 999988 89999764 454443 2333446999999999995 5543
No 205
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.14 E-value=3.4e-06 Score=87.03 Aligned_cols=104 Identities=13% Similarity=0.147 Sum_probs=75.4
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHH-hhcCceEEEEEeEEE
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIV-RKKNVDICFWEAECF 135 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~i~v~~~~~~v~ 135 (515)
..++|+|||||+.|+.+|..|++.|.+|+|+++.+.+.. . ...++...+.+.+ ++.|+++ +.+.++.
T Consensus 173 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-----~------~d~~~~~~l~~~l~~~~gv~i-~~~~~v~ 240 (468)
T 2qae_A 173 VPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAP-----T------LDEDVTNALVGALAKNEKMKF-MTSTKVV 240 (468)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-----T------SCHHHHHHHHHHHHHHTCCEE-ECSCEEE
T ss_pred CCceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcccc-----c------CCHHHHHHHHHHHhhcCCcEE-EeCCEEE
Confidence 358999999999999999999999999999998865321 1 1123445567778 8889887 3467899
Q ss_pred EEecCCC--EEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCC
Q 010217 136 KIDAENK--KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (515)
Q Consensus 136 ~id~~~~--~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~ 178 (515)
.++.+++ .+.+.+. +++..++.+|.||+|+|.+|+..
T Consensus 241 ~i~~~~~~~~v~~~~~------~g~~~~i~~D~vv~a~G~~p~~~ 279 (468)
T 2qae_A 241 GGTNNGDSVSLEVEGK------NGKRETVTCEALLVSVGRRPFTG 279 (468)
T ss_dssp EEEECSSSEEEEEECC---------EEEEEESEEEECSCEEECCT
T ss_pred EEEEcCCeEEEEEEcC------CCceEEEECCEEEECCCcccCCC
Confidence 9986553 3344310 11124799999999999998764
No 206
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.13 E-value=2.8e-06 Score=87.93 Aligned_cols=100 Identities=17% Similarity=0.265 Sum_probs=73.9
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEEE
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~ 136 (515)
..++|+|||||+.|+.+|..|++.|.+|+++++.+.+.. . ...++...+.+.+++.|+++. .+.++..
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~-----~------~d~~~~~~l~~~l~~~Gv~i~-~~~~v~~ 251 (479)
T 2hqm_A 184 QPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLR-----K------FDECIQNTITDHYVKEGINVH-KLSKIVK 251 (479)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCT-----T------SCHHHHHHHHHHHHHHTCEEE-CSCCEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCcccc-----c------cCHHHHHHHHHHHHhCCeEEE-eCCEEEE
Confidence 358999999999999999999999999999998865321 1 112344456777888898873 5678888
Q ss_pred EecCCC----EEEEeeCCccCCCCCceEEeecCEEEEccCCCcCC
Q 010217 137 IDAENK----KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (515)
Q Consensus 137 id~~~~----~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~ 177 (515)
++..+. .|.+.++ + ..+.+|.||+|+|.+|+.
T Consensus 252 i~~~~~~~~~~v~~~~G--------~-~~i~~D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 252 VEKNVETDKLKIHMNDS--------K-SIDDVDELIWTIGRKSHL 287 (479)
T ss_dssp EEECC-CCCEEEEETTS--------C-EEEEESEEEECSCEEECC
T ss_pred EEEcCCCcEEEEEECCC--------c-EEEEcCEEEECCCCCCcc
Confidence 876432 3444322 1 279999999999999876
No 207
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.13 E-value=1.3e-05 Score=79.58 Aligned_cols=100 Identities=23% Similarity=0.346 Sum_probs=73.0
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEEEE
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~i 137 (515)
.++|+|||+|+.|+.+|..|++.+.+|+++++.+.+... ......+.+..++.++++ +...++..+
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~-------------~~~~~~l~~~~~~~gv~i-~~~~~v~~i 228 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQGH-------------GKTAHEVERARANGTIDV-YLETEVASI 228 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSSC-------------SHHHHSSHHHHHHTSEEE-ESSEEEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCCC-------------HHHHHHHHHHhhcCceEE-EcCcCHHHh
Confidence 579999999999999999999999999999988654221 123344566667778776 346688888
Q ss_pred ecCCC---EEEEeeCCccCCCCCceEEeecCEEEEccCCCcCC
Q 010217 138 DAENK---KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (515)
Q Consensus 138 d~~~~---~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~ 177 (515)
+.++. .|.+... +++...+.+|.||+|+|..|+.
T Consensus 229 ~~~~~~v~~v~~~~~------~g~~~~i~~D~vi~a~G~~p~~ 265 (360)
T 3ab1_A 229 EESNGVLTRVHLRSS------DGSKWTVEADRLLILIGFKSNL 265 (360)
T ss_dssp EEETTEEEEEEEEET------TCCEEEEECSEEEECCCBCCSC
T ss_pred ccCCCceEEEEEEec------CCCeEEEeCCEEEECCCCCCCH
Confidence 87644 3555411 2223479999999999988865
No 208
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.13 E-value=6.2e-06 Score=84.69 Aligned_cols=102 Identities=16% Similarity=0.336 Sum_probs=74.9
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEEE
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~ 136 (515)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+.+... ....++...+.+.+++.|+++ +.+.+|..
T Consensus 148 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~----------~~~~~~~~~l~~~l~~~Gv~i-~~~~~v~~ 216 (452)
T 2cdu_A 148 KAKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYK----------YFDKEFTDILAKDYEAHGVNL-VLGSKVAA 216 (452)
T ss_dssp GCSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTT----------TSCHHHHHHHHHHHHHTTCEE-EESSCEEE
T ss_pred cCCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhh----------hhhhhHHHHHHHHHHHCCCEE-EcCCeeEE
Confidence 3579999999999999999999999999999987653210 011234455677788899987 45778888
Q ss_pred EecCCCEEE-EeeCCccCCCCCceEEeecCEEEEccCCCcCCC
Q 010217 137 IDAENKKVY-CRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (515)
Q Consensus 137 id~~~~~v~-~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~ 178 (515)
++..+..+. +.. . + .++.+|.||+|+|.+|+..
T Consensus 217 i~~~~~~v~~v~~-~-----g---~~i~~D~vv~a~G~~p~~~ 250 (452)
T 2cdu_A 217 FEEVDDEIITKTL-D-----G---KEIKSDIAILCIGFRPNTE 250 (452)
T ss_dssp EEEETTEEEEEET-T-----S---CEEEESEEEECCCEEECCG
T ss_pred EEcCCCeEEEEEe-C-----C---CEEECCEEEECcCCCCCHH
Confidence 886444442 221 1 2 1789999999999988754
No 209
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.13 E-value=3.5e-06 Score=87.55 Aligned_cols=100 Identities=19% Similarity=0.259 Sum_probs=74.6
Q ss_pred CCCeEEEECCcHHHHHHHHhccCC---CCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeE
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNP---SYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAE 133 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~---g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~ 133 (515)
..++++|||||+.|+.+|..|++. |.+|+|+++.+.+. +. ...++...+.+.+++.|+++. .+.+
T Consensus 190 ~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l-----~~------~d~~~~~~l~~~l~~~GV~i~-~~~~ 257 (495)
T 2wpf_A 190 PPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLIL-----RG------FDETIREEVTKQLTANGIEIM-TNEN 257 (495)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSC-----TT------SCHHHHHHHHHHHHHTTCEEE-ESCC
T ss_pred cCCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccc-----cc------cCHHHHHHHHHHHHhCCCEEE-eCCE
Confidence 357999999999999999999877 99999999876532 11 112344556777888999874 5778
Q ss_pred EEEEecCC-C--EEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCC
Q 010217 134 CFKIDAEN-K--KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (515)
Q Consensus 134 v~~id~~~-~--~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~ 178 (515)
|..++.++ + .|.+.++. ++.+|.||+|+|.+|+..
T Consensus 258 v~~i~~~~~~~~~v~~~~G~----------~i~~D~vv~a~G~~p~~~ 295 (495)
T 2wpf_A 258 PAKVSLNTDGSKHVTFESGK----------TLDVDVVMMAIGRIPRTN 295 (495)
T ss_dssp EEEEEECTTSCEEEEETTSC----------EEEESEEEECSCEEECCG
T ss_pred EEEEEEcCCceEEEEECCCc----------EEEcCEEEECCCCccccc
Confidence 88887653 2 34443322 799999999999988763
No 210
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.13 E-value=4.4e-06 Score=88.79 Aligned_cols=35 Identities=17% Similarity=0.214 Sum_probs=32.1
Q ss_pred CCeEEEECCcHHHHHHHHhccCCC--CeEEEEcCCCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPS--YDVQVISPRNY 92 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g--~~V~vie~~~~ 92 (515)
..||||||||+||++||..|++.| .+|+|||+.+.
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~ 41 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYP 41 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCG
T ss_pred cCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCC
Confidence 479999999999999999999888 99999998753
No 211
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.12 E-value=2.6e-06 Score=86.04 Aligned_cols=95 Identities=21% Similarity=0.338 Sum_probs=66.3
Q ss_pred cceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEecccccccc-ccHHHH---------HHHHHHhhcCC
Q 010217 223 ILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM-FDKRIT---------AFAEEKFSRDG 292 (515)
Q Consensus 223 ~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~~-~~~~~~---------~~~~~~l~~~g 292 (515)
+|+|+|||+|+.|+.+|..|++.+ .+.+|+||++.+..... +...+. ..-.+.+.+.|
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~------------~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~~~g 69 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLAD------------PSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLRAHG 69 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHC------------TTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHHHTT
T ss_pred cCEEEEECCcHHHHHHHHHHHhcC------------cCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHHHCC
Confidence 689999999999999999998764 35799999988753211 111110 00113455679
Q ss_pred eEEEcCcEEEEEeCCeEEEEecCCCceEEEecCeEEEccCC
Q 010217 293 IDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGI 333 (515)
Q Consensus 293 V~v~~~~~v~~i~~~~v~~~~~~~G~~~~i~~D~vi~a~G~ 333 (515)
|+++.+ +++.|+.+.-.+.. .+|++ +.+|.+|+|+|.
T Consensus 70 v~~i~~-~v~~id~~~~~v~~-~~g~~--i~yd~LviAtG~ 106 (401)
T 3vrd_B 70 IQVVHD-SALGIDPDKKLVKT-AGGAE--FAYDRCVVAPGI 106 (401)
T ss_dssp CEEECS-CEEEEETTTTEEEE-TTSCE--EECSEEEECCCE
T ss_pred CEEEEe-EEEEEEccCcEEEe-cccce--eecceeeeccCC
Confidence 999876 68889865434433 56764 999999999994
No 212
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.12 E-value=1.3e-05 Score=78.72 Aligned_cols=101 Identities=12% Similarity=0.193 Sum_probs=72.9
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccch-HHHHhhcCceEEEEEeEEE
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPV-RNIVRKKNVDICFWEAECF 135 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~i~v~~~~~~v~ 135 (515)
..++|+|||+|+.|+.+|..|++.+.+|+++++.+.+... ..+ ..++++.|+++ +.+.++.
T Consensus 154 ~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~~~-----------------~~~~~~~~~~~gV~v-~~~~~v~ 215 (335)
T 2a87_A 154 RDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRAS-----------------KIMLDRARNNDKIRF-LTNHTVV 215 (335)
T ss_dssp TTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCSSC-----------------TTHHHHHHHCTTEEE-ECSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCCcc-----------------HHHHHHHhccCCcEE-EeCceeE
Confidence 3589999999999999999999999999999987653210 112 24456678776 3477888
Q ss_pred EEecCCC--EEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCCC
Q 010217 136 KIDAENK--KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNT 180 (515)
Q Consensus 136 ~id~~~~--~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~i 180 (515)
.++.+++ .+.+.+.. +++..++.+|.||+|+|..|+...+
T Consensus 216 ~i~~~~~~~~v~~~~~~-----~g~~~~i~~D~vi~a~G~~p~~~~~ 257 (335)
T 2a87_A 216 AVDGDTTVTGLRVRDTN-----TGAETTLPVTGVFVAIGHEPRSGLV 257 (335)
T ss_dssp EEECSSSCCEEEEEEET-----TSCCEEECCSCEEECSCEEECCTTT
T ss_pred EEecCCcEeEEEEEEcC-----CCceEEeecCEEEEccCCccChhHh
Confidence 9987653 36665321 2223479999999999998875433
No 213
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.10 E-value=7.1e-06 Score=85.03 Aligned_cols=104 Identities=16% Similarity=0.252 Sum_probs=75.9
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEEE
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~ 136 (515)
.+++++|||+|+.|+.+|..|++.|.+|+++++...+ +.. ..++...+.+.+++.|+++ +.+..+..
T Consensus 186 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l------~~~------d~~~~~~l~~~l~~~Gv~i-~~~~~v~~ 252 (483)
T 3dgh_A 186 EPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIVL------RGF------DQQMAELVAASMEERGIPF-LRKTVPLS 252 (483)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCSS------TTS------CHHHHHHHHHHHHHTTCCE-EETEEEEE
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCC------ccc------CHHHHHHHHHHHHhCCCEE-EeCCEEEE
Confidence 3579999999999999999999999999999874211 111 1244455677888899987 45778888
Q ss_pred EecCC-C--EEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCC
Q 010217 137 IDAEN-K--KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (515)
Q Consensus 137 id~~~-~--~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~ 178 (515)
+...+ + .|.+.++. .++..++.+|.||+|+|..|+..
T Consensus 253 i~~~~~~~~~v~~~~~~-----~~~~~~~~~D~vi~a~G~~p~~~ 292 (483)
T 3dgh_A 253 VEKQDDGKLLVKYKNVE-----TGEESEDVYDTVLWAIGRKGLVD 292 (483)
T ss_dssp EEECTTSCEEEEEEETT-----TCCEEEEEESEEEECSCEEECCG
T ss_pred EEEcCCCcEEEEEecCC-----CCceeEEEcCEEEECcccccCcC
Confidence 87533 2 35555532 23345799999999999988754
No 214
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.10 E-value=5.3e-06 Score=86.15 Aligned_cols=106 Identities=17% Similarity=0.170 Sum_probs=74.9
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEEE
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~ 136 (515)
.+++|+|||||+.|+.+|..|++.|.+|+++++.+.+.. . ...++...+.+.+++. +++. .+.++..
T Consensus 173 ~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~--~---------~d~~~~~~l~~~l~~~-V~i~-~~~~v~~ 239 (492)
T 3ic9_A 173 LPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVAN--L---------QDEEMKRYAEKTFNEE-FYFD-AKARVIS 239 (492)
T ss_dssp CCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTT--C---------CCHHHHHHHHHHHHTT-SEEE-TTCEEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc--c---------CCHHHHHHHHHHHhhC-cEEE-ECCEEEE
Confidence 368999999999999999999999999999998876431 1 0123444456666666 7763 4678888
Q ss_pred EecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCC
Q 010217 137 IDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFN 179 (515)
Q Consensus 137 id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ 179 (515)
+...++.+.+.... .+++..++.+|.||+|+|..|+...
T Consensus 240 i~~~~~~v~v~~~~----~~G~~~~i~~D~Vi~a~G~~p~~~~ 278 (492)
T 3ic9_A 240 TIEKEDAVEVIYFD----KSGQKTTESFQYVLAATGRKANVDK 278 (492)
T ss_dssp EEECSSSEEEEEEC----TTCCEEEEEESEEEECSCCEESCSS
T ss_pred EEEcCCEEEEEEEe----CCCceEEEECCEEEEeeCCccCCCC
Confidence 87655444333210 0222348999999999999987654
No 215
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.10 E-value=4.6e-06 Score=85.25 Aligned_cols=99 Identities=22% Similarity=0.329 Sum_probs=71.0
Q ss_pred ceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEecccccc--ccc---------cHHHHHHHHHHhhcCC
Q 010217 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL--NMF---------DKRITAFAEEKFSRDG 292 (515)
Q Consensus 224 ~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l--~~~---------~~~~~~~~~~~l~~~g 292 (515)
++|+|||||+.|+.+|..|++... .+.+|+|+++.+.+. +.+ ..++...+.+.+++.|
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~-----------~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g 73 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALG-----------SGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKG 73 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHG-----------GGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTT
T ss_pred CcEEEECCcHHHHHHHHHHhccCC-----------CcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCC
Confidence 589999999999999999987321 268999999988651 111 1223333456777899
Q ss_pred eEEEcCcEEEEEeCCeEEEEecCCCceEEEecCeEEEccCCCCccch
Q 010217 293 IDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAII 339 (515)
Q Consensus 293 V~v~~~~~v~~i~~~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~ 339 (515)
|+++. .+++.++.+.-.+. +.+|++ +.+|.+|+|+| ..|+.
T Consensus 74 v~~~~-~~v~~id~~~~~V~-~~~g~~--i~~d~lviAtG--~~~~~ 114 (437)
T 3sx6_A 74 IHFIA-QSAEQIDAEAQNIT-LADGNT--VHYDYLMIATG--PKLAF 114 (437)
T ss_dssp CEEEC-SCEEEEETTTTEEE-ETTSCE--EECSEEEECCC--CEECG
T ss_pred CEEEE-eEEEEEEcCCCEEE-ECCCCE--EECCEEEECCC--CCcCc
Confidence 99985 68999986543333 245664 99999999999 45554
No 216
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.10 E-value=1.2e-05 Score=81.56 Aligned_cols=107 Identities=17% Similarity=0.235 Sum_probs=77.9
Q ss_pred ceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEecccccccc----------------------------
Q 010217 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM---------------------------- 275 (515)
Q Consensus 224 ~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~~---------------------------- 275 (515)
.+|+|||||+.|+.+|..|++. |.+|+|+++.+.+...
T Consensus 28 ~dViIIGgG~AGl~aA~~La~~--------------G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~ 93 (417)
T 3v76_A 28 QDVVIIGAGAAGMMCAIEAGKR--------------GRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHF 93 (417)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTT
T ss_pred CCEEEECcCHHHHHHHHHHHHC--------------CCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHH
Confidence 3899999999999999999985 6899999987643100
Q ss_pred ------------------------------------ccHHHHHHHHHHhhcCCeEEEcCcEEEEEe--CCeEEEEecCCC
Q 010217 276 ------------------------------------FDKRITAFAEEKFSRDGIDVKLGSMVVKVT--DKEIFTKVRGNG 317 (515)
Q Consensus 276 ------------------------------------~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~--~~~v~~~~~~~G 317 (515)
....+.+.+.+.+++.||+++++++|+++. ++++.+.. .+|
T Consensus 94 ~~~~l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~-~~g 172 (417)
T 3v76_A 94 CKSALARYRPQDFVALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTT-SAG 172 (417)
T ss_dssp THHHHHHSCHHHHHHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEE-TTE
T ss_pred HHHHHHhcCHHHHHHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEE-CCc
Confidence 012455667777888899999999999985 34555543 455
Q ss_pred ceEEEecCeEEEccCCCCccch------HHHHHHhCC
Q 010217 318 ETSSMPYGMVVWSTGIAPHAII------KDFMKQVGQ 348 (515)
Q Consensus 318 ~~~~i~~D~vi~a~G~~~~p~~------~~l~~~~~~ 348 (515)
++.||.||+|+|....|.+ ..+++.+|.
T Consensus 173 ---~i~ad~VIlAtG~~S~p~~gs~g~g~~la~~~G~ 206 (417)
T 3v76_A 173 ---TVDAASLVVASGGKSIPKMGATGLAYRIAEQFGL 206 (417)
T ss_dssp ---EEEESEEEECCCCSSCGGGTCCCHHHHHHHHTTC
T ss_pred ---EEEeeEEEECCCCccCCCCCCCcHHHHHHHHCCC
Confidence 3999999999996544432 245666664
No 217
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.09 E-value=1.3e-05 Score=77.81 Aligned_cols=92 Identities=16% Similarity=0.270 Sum_probs=70.8
Q ss_pred ceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEecc--cccc--------ccc----cHHHHHHHHHHhh
Q 010217 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAA--DHIL--------NMF----DKRITAFAEEKFS 289 (515)
Q Consensus 224 ~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~--~~~l--------~~~----~~~~~~~~~~~l~ 289 (515)
.+|+|||+|+.|+.+|..|.+. +.+|+++++. ..+. +.+ ..++.+.+.+.++
T Consensus 16 ~~vvIIG~G~aGl~aA~~l~~~--------------g~~v~lie~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (323)
T 3f8d_A 16 FDVIIVGLGPAAYGAALYSARY--------------MLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIE 81 (323)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--------------TCCEEEEESSTTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHH
T ss_pred cCEEEECccHHHHHHHHHHHHC--------------CCcEEEEeccCCCeecccccccccCCCCCCCHHHHHHHHHHHHH
Confidence 5899999999999999999985 6899999985 1111 111 2567778888888
Q ss_pred cCCeEEEcCcEEEEEeCC--eEEEEecCCCceEEEecCeEEEccCC
Q 010217 290 RDGIDVKLGSMVVKVTDK--EIFTKVRGNGETSSMPYGMVVWSTGI 333 (515)
Q Consensus 290 ~~gV~v~~~~~v~~i~~~--~v~~~~~~~G~~~~i~~D~vi~a~G~ 333 (515)
+.|++++. +.+.+++.+ .+.+.. .+|+. +.+|.||+|+|.
T Consensus 82 ~~~v~~~~-~~v~~i~~~~~~~~v~~-~~g~~--~~~d~lvlAtG~ 123 (323)
T 3f8d_A 82 KYEVPVLL-DIVEKIENRGDEFVVKT-KRKGE--FKADSVILGIGV 123 (323)
T ss_dssp TTTCCEEE-SCEEEEEEC--CEEEEE-SSSCE--EEEEEEEECCCC
T ss_pred HcCCEEEE-EEEEEEEecCCEEEEEE-CCCCE--EEcCEEEECcCC
Confidence 99999999 889888754 344443 45554 899999999994
No 218
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.09 E-value=4.8e-06 Score=80.75 Aligned_cols=38 Identities=18% Similarity=0.183 Sum_probs=33.9
Q ss_pred CCeEEEECCcHHHHHHHHhccCC--CCeEEEEcCCCCCcc
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNP--SYDVQVISPRNYFAF 95 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~--g~~V~vie~~~~~~~ 95 (515)
..||+|||||++|++||..|++. |++|+|+|+.+..++
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~gg 104 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG 104 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCT
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccc
Confidence 35999999999999999999977 999999999877653
No 219
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.08 E-value=6.8e-06 Score=86.55 Aligned_cols=36 Identities=19% Similarity=0.290 Sum_probs=33.1
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYF 93 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~ 93 (515)
..+|+||||||+|+++|..|++.|++|+|||+.+..
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~ 61 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGT 61 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 469999999999999999999999999999987654
No 220
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.08 E-value=5.4e-06 Score=87.67 Aligned_cols=34 Identities=12% Similarity=0.302 Sum_probs=32.1
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~ 91 (515)
.+||+|||||++|+++|+.|++.|++|+|||+.+
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~ 65 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQD 65 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 5799999999999999999999999999999875
No 221
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.08 E-value=5.1e-06 Score=85.69 Aligned_cols=100 Identities=15% Similarity=0.203 Sum_probs=75.2
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEEE
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~ 136 (515)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+.+. + . ..++...+.+.+++.|+++. .+.+|..
T Consensus 175 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l--~-~---------~~~~~~~l~~~l~~~Gv~i~-~~~~v~~ 241 (467)
T 1zk7_A 175 IPERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFF--R-E---------DPAIGEAVTAAFRAEGIEVL-EHTQASQ 241 (467)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT--T-S---------CHHHHHHHHHHHHHTTCEEE-TTCCEEE
T ss_pred cCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccC--C-C---------CHHHHHHHHHHHHhCCCEEE-cCCEEEE
Confidence 35899999999999999999999999999999876432 1 1 12445557777888998873 4678888
Q ss_pred EecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCC
Q 010217 137 IDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (515)
Q Consensus 137 id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~ 178 (515)
++.++..+.+... + .++.+|.||+|+|.+|+..
T Consensus 242 i~~~~~~~~v~~~------~---~~i~aD~Vv~a~G~~p~~~ 274 (467)
T 1zk7_A 242 VAHMDGEFVLTTT------H---GELRADKLLVATGRTPNTR 274 (467)
T ss_dssp EEEETTEEEEEET------T---EEEEESEEEECSCEEESCT
T ss_pred EEEeCCEEEEEEC------C---cEEEcCEEEECCCCCcCCC
Confidence 8766655444321 1 2789999999999998753
No 222
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.07 E-value=4.9e-06 Score=83.49 Aligned_cols=96 Identities=17% Similarity=0.307 Sum_probs=69.5
Q ss_pred ceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEecccccc---ccccHHH---------HHHHHHHhhcC
Q 010217 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL---NMFDKRI---------TAFAEEKFSRD 291 (515)
Q Consensus 224 ~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l---~~~~~~~---------~~~~~~~l~~~ 291 (515)
-+|+|||||+.|+.+|..|.. .+.+|+++++.+.+. +.++..+ .....+.+++.
T Consensus 10 ~~~vIvGgG~AGl~aA~~L~~--------------~~~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~ 75 (385)
T 3klj_A 10 TKILILGAGPAGFSAAKAALG--------------KCDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKN 75 (385)
T ss_dssp CSEEEECCSHHHHHHHHHHTT--------------TCSCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHHT
T ss_pred CCEEEEcCcHHHHHHHHHHhC--------------CCCEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHHC
Confidence 389999999999999999943 368999999887641 1121111 11233556778
Q ss_pred CeEEEcCcEEEEEeCCeEEEEecCCCceEEEecCeEEEccCCCCccc
Q 010217 292 GIDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAI 338 (515)
Q Consensus 292 gV~v~~~~~v~~i~~~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~ 338 (515)
||+++++++|++++.+.-.+. +.+|++ +.+|.+|+|||. .|.
T Consensus 76 ~i~~~~~~~V~~id~~~~~v~-~~~g~~--~~yd~lvlAtG~--~p~ 117 (385)
T 3klj_A 76 NIKVITSEFATSIDPNNKLVT-LKSGEK--IKYEKLIIASGS--IAN 117 (385)
T ss_dssp TCEEECSCCEEEEETTTTEEE-ETTSCE--EECSEEEECCCE--EEC
T ss_pred CCEEEeCCEEEEEECCCCEEE-ECCCCE--EECCEEEEecCC--CcC
Confidence 999999999999986543333 256764 999999999994 554
No 223
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.07 E-value=1.3e-05 Score=77.59 Aligned_cols=99 Identities=18% Similarity=0.160 Sum_probs=69.5
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHH-hhcCceEEEEEeEEE
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIV-RKKNVDICFWEAECF 135 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~i~v~~~~~~v~ 135 (515)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+.+... ..+.+.+ ++.|+++ +.+..+.
T Consensus 142 ~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~-----------------~~~~~~l~~~~gv~v-~~~~~v~ 203 (311)
T 2q0l_A 142 KNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFRCA-----------------PITLEHAKNNDKIEF-LTPYVVE 203 (311)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCCSC-----------------HHHHHHHHTCTTEEE-ETTEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccCCC-----------------HHHHHHHhhCCCeEE-EeCCEEE
Confidence 3589999999999999999999999999999988654210 0122233 3468776 3466788
Q ss_pred EEecCCC---EEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCC
Q 010217 136 KIDAENK---KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (515)
Q Consensus 136 ~id~~~~---~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~ 178 (515)
.++.++. .+.+.+.. +++..++.+|.||+|+|..|+..
T Consensus 204 ~i~~~~~~v~~v~~~~~~-----~g~~~~i~~D~vi~a~G~~p~~~ 244 (311)
T 2q0l_A 204 EIKGDASGVSSLSIKNTA-----TNEKRELVVPGFFIFVGYDVNNA 244 (311)
T ss_dssp EEEEETTEEEEEEEEETT-----TCCEEEEECSEEEECSCEEECCG
T ss_pred EEECCCCcEeEEEEEecC-----CCceEEEecCEEEEEecCccChh
Confidence 8876533 35555311 22344789999999999988753
No 224
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.07 E-value=1.6e-05 Score=79.06 Aligned_cols=96 Identities=14% Similarity=0.213 Sum_probs=71.2
Q ss_pred ceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCc-EEEEEecccccc--------------c-------c------
Q 010217 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSV-KITLLEAADHIL--------------N-------M------ 275 (515)
Q Consensus 224 ~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~-~Vtlv~~~~~~l--------------~-------~------ 275 (515)
.+|+|||||+.|+.+|..|.+. +. +|+++++.+ +. + .
T Consensus 5 ~~vvIIGaG~aGl~aA~~l~~~--------------g~~~v~lie~~~-~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 69 (369)
T 3d1c_A 5 HKVAIIGAGAAGIGMAITLKDF--------------GITDVIILEKGT-VGHSFKHWPKSTRTITPSFTSNGFGMPDMNA 69 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--------------TCCCEEEECSSS-TTHHHHTSCTTCBCSSCCCCCGGGTCCCTTC
T ss_pred CcEEEECcCHHHHHHHHHHHHc--------------CCCcEEEEecCC-CCCccccCcccccccCcchhcccCCchhhhh
Confidence 3899999999999999999875 56 899999875 10 0 0
Q ss_pred ----------------ccHHHHHHHHHHhhcCCeEEEcCcEEEEEeCC--eEEEEecCCCceEEEecCeEEEccCCCCcc
Q 010217 276 ----------------FDKRITAFAEEKFSRDGIDVKLGSMVVKVTDK--EIFTKVRGNGETSSMPYGMVVWSTGIAPHA 337 (515)
Q Consensus 276 ----------------~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~--~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p 337 (515)
....+...+...+++.|++++.++.|.+++.+ ...+.. .+|+ +.+|.||+|+|....|
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~-~~g~---~~~d~vVlAtG~~~~p 145 (369)
T 3d1c_A 70 ISMDTSPAFTFNEEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIAT-TTET---YHADYIFVATGDYNFP 145 (369)
T ss_dssp SSTTCCHHHHHCCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEE-SSCC---EEEEEEEECCCSTTSB
T ss_pred ccccccccccccccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEe-CCCE---EEeCEEEECCCCCCcc
Confidence 01345566777788899999999999998743 444443 4453 8899999999964444
Q ss_pred c
Q 010217 338 I 338 (515)
Q Consensus 338 ~ 338 (515)
.
T Consensus 146 ~ 146 (369)
T 3d1c_A 146 K 146 (369)
T ss_dssp C
T ss_pred C
Confidence 3
No 225
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.06 E-value=1.3e-05 Score=82.32 Aligned_cols=96 Identities=23% Similarity=0.473 Sum_probs=67.5
Q ss_pred ceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEecccccc------ccc------cHHHHHHHHHHh-hc
Q 010217 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL------NMF------DKRITAFAEEKF-SR 290 (515)
Q Consensus 224 ~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l------~~~------~~~~~~~~~~~l-~~ 290 (515)
++|+|||||+.|+.+|..|++.. ++.+|+++++.+.+. +.+ ...+.....+.+ ++
T Consensus 4 ~~VvIIGgG~aGl~aA~~L~~~~------------~~~~V~vie~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 71 (449)
T 3kd9_A 4 KKVVIIGGGAAGMSAASRVKRLK------------PEWDVKVFEATEWVSHAPCGIPYVVEGLSTPDKLMYYPPEVFIKK 71 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC------------TTSEEEEECSSSCCC------------------------CTHHHH
T ss_pred CcEEEECCcHHHHHHHHHHHHhC------------cCCCEEEEECCCccccCCcCCccccCCCCCHHHhhhcCHHHHHHh
Confidence 48999999999999999998863 357999999987541 110 011112222334 67
Q ss_pred CCeEEEcCcEEEEEeCCeEEEEecCCCceEEEecCeEEEccCC
Q 010217 291 DGIDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGI 333 (515)
Q Consensus 291 ~gV~v~~~~~v~~i~~~~v~~~~~~~G~~~~i~~D~vi~a~G~ 333 (515)
.||++++++++..++.+...+.. .+|+ .++.+|.+|+|||.
T Consensus 72 ~gi~v~~~~~v~~i~~~~~~v~~-~~g~-~~~~~d~lviAtG~ 112 (449)
T 3kd9_A 72 RGIDLHLNAEVIEVDTGYVRVRE-NGGE-KSYEWDYLVFANGA 112 (449)
T ss_dssp TTCEEETTCEEEEECSSEEEEEC-SSSE-EEEECSEEEECCCE
T ss_pred cCcEEEecCEEEEEecCCCEEEE-CCce-EEEEcCEEEECCCC
Confidence 89999999999999877665543 4443 25999999999994
No 226
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.06 E-value=4.2e-06 Score=92.73 Aligned_cols=35 Identities=20% Similarity=0.522 Sum_probs=32.6
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCC-eEEEEcCCCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSY-DVQVISPRNY 92 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~-~V~vie~~~~ 92 (515)
.+||||||||++|+++|++|++.|+ +|+|||++..
T Consensus 4 ~~dVvIIGgGi~Gls~A~~La~~G~~~V~vlE~~~~ 39 (830)
T 1pj5_A 4 TPRIVIIGAGIVGTNLADELVTRGWNNITVLDQGPL 39 (830)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSCT
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCcEEEEeCCCC
Confidence 5799999999999999999999998 9999998764
No 227
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.05 E-value=6.1e-06 Score=85.25 Aligned_cols=99 Identities=21% Similarity=0.359 Sum_probs=74.1
Q ss_pred CCeEEEECCcHHHHHHHHhccCC-CCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEEE
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNP-SYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~-g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~ 136 (515)
.++|+|||+|+.|+.+|..|++. |.+|+++++.+.+... . ....+...+.+.+++.|+++. .+.+|..
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~-~---------~~~~~~~~l~~~l~~~GV~i~-~~~~v~~ 227 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPG-F---------TSKSLSQMLRHDLEKNDVVVH-TGEKVVR 227 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTT-T---------SCHHHHHHHHHHHHHTTCEEE-CSCCEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCccccc-c---------cCHHHHHHHHHHHHhcCCEEE-eCCEEEE
Confidence 57999999999999999999988 9999999987643210 0 112445556778888998873 4668888
Q ss_pred EecCCCE--EEEeeCCccCCCCCceEEeecCEEEEccCCCcCC
Q 010217 137 IDAENKK--VYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (515)
Q Consensus 137 id~~~~~--v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~ 177 (515)
++..+.. +.+.++. ++.+|.||+|+|.+|+.
T Consensus 228 i~~~~~~v~v~~~~g~----------~i~aD~Vv~a~G~~p~~ 260 (472)
T 3iwa_A 228 LEGENGKVARVITDKR----------TLDADLVILAAGVSPNT 260 (472)
T ss_dssp EEESSSBEEEEEESSC----------EEECSEEEECSCEEECC
T ss_pred EEccCCeEEEEEeCCC----------EEEcCEEEECCCCCcCH
Confidence 8875444 3443322 79999999999998864
No 228
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.05 E-value=1e-05 Score=83.95 Aligned_cols=104 Identities=14% Similarity=0.132 Sum_probs=74.7
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEEE
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~ 136 (515)
.+++|+|||||+.|+.+|..|++.|.+|+++++... ++.. ..++...+.+.+++.|+++ +.+..+..
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~------l~~~------d~~~~~~l~~~l~~~gv~~-~~~~~v~~ 250 (488)
T 3dgz_A 184 SPGKTLVVGASYVALECAGFLTGIGLDTTVMMRSIP------LRGF------DQQMSSLVTEHMESHGTQF-LKGCVPSH 250 (488)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCS------STTS------CHHHHHHHHHHHHHTTCEE-EETEEEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCcc------cccC------CHHHHHHHHHHHHHCCCEE-EeCCEEEE
Confidence 457899999999999999999999999999997532 1111 1244555677888899887 35667888
Q ss_pred EecC-CC--EEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCC
Q 010217 137 IDAE-NK--KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (515)
Q Consensus 137 id~~-~~--~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~ 178 (515)
+... ++ .+.+.+.. +++..++.+|.||+|+|..|+..
T Consensus 251 i~~~~~~~~~v~~~~~~-----~g~~~~~~~D~vi~a~G~~p~~~ 290 (488)
T 3dgz_A 251 IKKLPTNQLQVTWEDHA-----SGKEDTGTFDTVLWAIGRVPETR 290 (488)
T ss_dssp EEECTTSCEEEEEEETT-----TTEEEEEEESEEEECSCEEESCG
T ss_pred EEEcCCCcEEEEEEeCC-----CCeeEEEECCEEEEcccCCcccC
Confidence 8652 22 34454421 23334689999999999988764
No 229
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.04 E-value=1.5e-06 Score=90.67 Aligned_cols=43 Identities=19% Similarity=0.132 Sum_probs=38.2
Q ss_pred CCCCCeEEEECCcHHHHHHHHhccC-CCCeEEEEcCCCCCccCC
Q 010217 55 GIKKKKVVVLGTGWAGTSFLKNLNN-PSYDVQVISPRNYFAFTP 97 (515)
Q Consensus 55 ~~~~~~VvIIGgG~AGlsaA~~L~~-~g~~V~vie~~~~~~~~~ 97 (515)
..+..||||||||++||+||++|++ .|++|+|+|+++..||..
T Consensus 7 p~~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~ 50 (513)
T 4gde_A 7 PDISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLA 50 (513)
T ss_dssp CSEEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGG
T ss_pred CCCCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCe
Confidence 3456899999999999999999986 699999999999999854
No 230
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.04 E-value=9.5e-06 Score=83.94 Aligned_cols=107 Identities=14% Similarity=0.126 Sum_probs=74.9
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEEE
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~ 136 (515)
..++|+|||||+.|+.+|..|++.|.+|+++++.+.+.- . ...++...+.+.+++.|+++ +.+..+..
T Consensus 186 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-----~------~d~~~~~~~~~~l~~~gv~i-~~~~~v~~ 253 (478)
T 3dk9_A 186 LPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLR-----S------FDSMISTNCTEELENAGVEV-LKFSQVKE 253 (478)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT-----T------SCHHHHHHHHHHHHHTTCEE-ETTEEEEE
T ss_pred cCccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCcccc-----c------cCHHHHHHHHHHHHHCCCEE-EeCCEEEE
Confidence 358999999999999999999999999999998765321 1 11234455677788899887 34677888
Q ss_pred EecCC-C-EEEEeeCCccCCCCCce--EEeecCEEEEccCCCcCCC
Q 010217 137 IDAEN-K-KVYCRSSQNTNLNGKEE--FCMDYDYLVIAMGARANTF 178 (515)
Q Consensus 137 id~~~-~-~v~~~~~~~~~~~~~~~--~~~~~d~lviAtG~~~~~~ 178 (515)
++... . .+.+..... ..++. ..+.+|.||+|+|..|+..
T Consensus 254 i~~~~~~~~~~v~~~~~---~~g~~~g~~~~~D~vi~a~G~~p~~~ 296 (478)
T 3dk9_A 254 VKKTLSGLEVSMVTAVP---GRLPVMTMIPDVDCLLWAIGRVPNTK 296 (478)
T ss_dssp EEECSSSEEEEEEECCT---TSCCEEEEEEEESEEEECSCEEESCT
T ss_pred EEEcCCCcEEEEEEccC---CCCcccceEEEcCEEEEeeccccCCC
Confidence 87543 2 233322110 01111 4799999999999988764
No 231
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.04 E-value=5.5e-06 Score=86.24 Aligned_cols=102 Identities=16% Similarity=0.258 Sum_probs=76.2
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEEE
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~ 136 (515)
..++++|||+|+.|+.+|..|.+.|.+|+++++.+.+.. . ...++...+.+.+++.|+++ +.+.+|..
T Consensus 181 ~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~-----~------~d~~~~~~l~~~l~~~GV~i-~~~~~V~~ 248 (499)
T 1xdi_A 181 LPDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLP-----Y------EDADAALVLEESFAERGVRL-FKNARAAS 248 (499)
T ss_dssp CCSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSC-----C------SSHHHHHHHHHHHHHTTCEE-ETTCCEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcccc-----c------cCHHHHHHHHHHHHHCCCEE-EeCCEEEE
Confidence 357999999999999999999999999999998865321 1 11244555677888899887 34678888
Q ss_pred EecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCC
Q 010217 137 IDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (515)
Q Consensus 137 id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~ 178 (515)
|+.+++.+.+.... + .++.+|.||+|+|.+|+..
T Consensus 249 i~~~~~~v~v~~~~-----g---~~i~aD~Vv~a~G~~p~~~ 282 (499)
T 1xdi_A 249 VTRTGAGVLVTMTD-----G---RTVEGSHALMTIGSVPNTS 282 (499)
T ss_dssp EEECSSSEEEEETT-----S---CEEEESEEEECCCEEECCS
T ss_pred EEEeCCEEEEEECC-----C---cEEEcCEEEECCCCCcCCC
Confidence 88665445444321 1 1789999999999998764
No 232
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.04 E-value=7.7e-06 Score=86.18 Aligned_cols=35 Identities=23% Similarity=0.379 Sum_probs=32.3
Q ss_pred CCCeEEEECCcHHHHHHHHhccC---CCCeEEEEcCCC
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNN---PSYDVQVISPRN 91 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~---~g~~V~vie~~~ 91 (515)
..++|||||||+||+++|..|++ .|++|+|||+.+
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 61 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPD 61 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCC
Confidence 45799999999999999999998 999999999864
No 233
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.04 E-value=8.5e-06 Score=85.29 Aligned_cols=101 Identities=12% Similarity=0.232 Sum_probs=74.1
Q ss_pred CeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEEEEe
Q 010217 59 KKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKID 138 (515)
Q Consensus 59 ~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~id 138 (515)
++++|||+|+.|+.+|..|++.|.+|+++++.+.+.. . ...++...+.+.+++.|+++ +.+++|..++
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~-----~------~~~~~~~~l~~~l~~~GV~i-~~~~~V~~i~ 282 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKL-----I------KDNETRAYVLDRMKEQGMEI-ISGSNVTRIE 282 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT-----C------CSHHHHHHHHHHHHHTTCEE-ESSCEEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCcccc-----c------ccHHHHHHHHHHHHhCCcEE-EECCEEEEEE
Confidence 8999999999999999999999999999998865321 1 11244555677888899887 3577899987
Q ss_pred cCCCE----EEEeeCCccCCCCCceEEeecCEEEEccCCCcCCC
Q 010217 139 AENKK----VYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (515)
Q Consensus 139 ~~~~~----v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~ 178 (515)
..+.. +.+... ++ +.++.+|.||+|+|.+|+..
T Consensus 283 ~~~~~~v~~~~v~~~------~G-~~~i~aD~Vv~A~G~~p~~~ 319 (523)
T 1mo9_A 283 EDANGRVQAVVAMTP------NG-EMRIETDFVFLGLGEQPRSA 319 (523)
T ss_dssp ECTTSBEEEEEEEET------TE-EEEEECSCEEECCCCEECCH
T ss_pred EcCCCceEEEEEEEC------CC-cEEEEcCEEEECcCCccCCc
Confidence 63221 333321 22 23689999999999998763
No 234
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.03 E-value=2e-05 Score=80.80 Aligned_cols=102 Identities=20% Similarity=0.203 Sum_probs=72.0
Q ss_pred ceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCc--EEEEEecccccccc--------------------------
Q 010217 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSV--KITLLEAADHILNM-------------------------- 275 (515)
Q Consensus 224 ~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~--~Vtlv~~~~~~l~~-------------------------- 275 (515)
++|+|||||++|+.+|..|.+. +. +|+++++.+.+...
T Consensus 7 ~dV~IIGaG~aGl~aA~~L~~~--------------G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~ 72 (447)
T 2gv8_A 7 RKIAIIGAGPSGLVTAKALLAE--------------KAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIV 72 (447)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT--------------TCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBC
T ss_pred CEEEEECccHHHHHHHHHHHhc--------------CCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccc
Confidence 5999999999999999999975 56 99999987532100
Q ss_pred --------------------------c--------------cHHHHHHHHHHhhcCCeEEEcCcEEEEEeC--CeEEE--
Q 010217 276 --------------------------F--------------DKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFT-- 311 (515)
Q Consensus 276 --------------------------~--------------~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~--~~v~~-- 311 (515)
+ ...+.+++.+.+++.++.++++++|+.++. +...+
T Consensus 73 ~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~ 152 (447)
T 2gv8_A 73 GPAALPVYPSPLYRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTY 152 (447)
T ss_dssp CSSSCCBCCCCCCTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEE
T ss_pred cccccCCccCchhhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEE
Confidence 0 124556667777777888999999999964 33333
Q ss_pred EecCCCc-eEEEecCeEEEccCCCCccch
Q 010217 312 KVRGNGE-TSSMPYGMVVWSTGIAPHAII 339 (515)
Q Consensus 312 ~~~~~G~-~~~i~~D~vi~a~G~~~~p~~ 339 (515)
.+..+|+ ..++.+|.||+|+|....|+.
T Consensus 153 ~~~~~G~~~~~~~~d~VVvAtG~~s~p~~ 181 (447)
T 2gv8_A 153 KGTKAGSPISKDIFDAVSICNGHYEVPYI 181 (447)
T ss_dssp EESSTTCCEEEEEESEEEECCCSSSSBCB
T ss_pred eecCCCCeeEEEEeCEEEECCCCCCCCCC
Confidence 2222365 335899999999996435543
No 235
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.02 E-value=1e-05 Score=85.84 Aligned_cols=36 Identities=19% Similarity=0.190 Sum_probs=32.8
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYF 93 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~ 93 (515)
..||||||||+||++||+.|++.|++|+|+|+.+..
T Consensus 7 ~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~ 42 (588)
T 2wdq_A 7 EFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPT 42 (588)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCC
Confidence 479999999999999999999999999999987543
No 236
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.02 E-value=1.5e-05 Score=83.22 Aligned_cols=105 Identities=16% Similarity=0.239 Sum_probs=71.3
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEEE
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~ 136 (515)
.+++|+|||||+.|+.+|..|++.|.+|+|+++... ++.. ..++...+.+.+++.|+++. .+.++..
T Consensus 209 ~~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~~------l~~~------d~~~~~~~~~~l~~~GV~v~-~~~~v~~ 275 (519)
T 3qfa_A 209 CPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSIL------LRGF------DQDMANKIGEHMEEHGIKFI-RQFVPIK 275 (519)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCS------STTS------CHHHHHHHHHHHHHTTCEEE-ESEEEEE
T ss_pred cCCeEEEECCcHHHHHHHHHHHHcCCeEEEEecccc------cccC------CHHHHHHHHHHHHHCCCEEE-eCCeEEE
Confidence 356899999999999999999999999999997421 1111 12445556777888998873 4555555
Q ss_pred EecCC----CE--EEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCC
Q 010217 137 IDAEN----KK--VYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFN 179 (515)
Q Consensus 137 id~~~----~~--v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ 179 (515)
+.... .. +.+.... +++..++.+|.||+|+|..|+...
T Consensus 276 v~~~~~~~~~~~~v~~~~~~-----g~~~~~~~~D~vi~a~G~~p~~~~ 319 (519)
T 3qfa_A 276 VEQIEAGTPGRLRVVAQSTN-----SEEIIEGEYNTVMLAIGRDACTRK 319 (519)
T ss_dssp EEEEECCTTCEEEEEEEESS-----SSCEEEEEESEEEECSCEEESCSS
T ss_pred EEEccCCCCceEEEEEEECC-----CcEEEEEECCEEEEecCCcccCCC
Confidence 54321 22 3333221 223357889999999999987643
No 237
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.02 E-value=1.1e-05 Score=85.81 Aligned_cols=35 Identities=20% Similarity=0.261 Sum_probs=32.3
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNY 92 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~ 92 (515)
..||||||||+||++||+.|++.|++|+|||+...
T Consensus 18 ~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~ 52 (621)
T 2h88_A 18 EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFP 52 (621)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCG
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCC
Confidence 47999999999999999999999999999998753
No 238
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.01 E-value=3.3e-05 Score=77.81 Aligned_cols=106 Identities=19% Similarity=0.248 Sum_probs=76.7
Q ss_pred eEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccccc-----------------c------------
Q 010217 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN-----------------M------------ 275 (515)
Q Consensus 225 ~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~-----------------~------------ 275 (515)
.|+|||||+.|+.+|..+++. +.+|+|+++.+.+.. .
T Consensus 6 dViIIGgG~aGl~aA~~la~~--------------G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~ 71 (401)
T 2gqf_A 6 ENIIIGAGAAGLFCAAQLAKL--------------GKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFV 71 (401)
T ss_dssp SEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTST
T ss_pred CEEEECCcHHHHHHHHHHHhC--------------CCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHH
Confidence 799999999999999999985 678999988764310 0
Q ss_pred -----------------------------------ccHHHHHHHHHHhhcCCeEEEcCcEEEEEe-C-----CeEEEEec
Q 010217 276 -----------------------------------FDKRITAFAEEKFSRDGIDVKLGSMVVKVT-D-----KEIFTKVR 314 (515)
Q Consensus 276 -----------------------------------~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~-~-----~~v~~~~~ 314 (515)
....+.+.+.+.+++.||+++++++++++. . +.+.+..
T Consensus 72 ~~~l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~- 150 (401)
T 2gqf_A 72 KSALARYTNWDFISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQV- 150 (401)
T ss_dssp HHHHHHSCHHHHHHHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEE-
T ss_pred HHHHHhCCHHHHHHHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEE-
Confidence 123445667777888899999999999986 3 3454443
Q ss_pred CCCceEEEecCeEEEccCCCCccch------HHHHHHhCC
Q 010217 315 GNGETSSMPYGMVVWSTGIAPHAII------KDFMKQVGQ 348 (515)
Q Consensus 315 ~~G~~~~i~~D~vi~a~G~~~~p~~------~~l~~~~~~ 348 (515)
.+| ++.+|.||+|+|....|.+ ..++..+|+
T Consensus 151 ~~g---~i~ad~VVlAtG~~s~p~~g~~G~g~~la~~~G~ 187 (401)
T 2gqf_A 151 NST---QWQCKNLIVATGGLSMPGLGATPFGYQIAEQFGI 187 (401)
T ss_dssp TTE---EEEESEEEECCCCSSCGGGTCCSHHHHHHHHTTC
T ss_pred CCC---EEECCEEEECCCCccCCCCCCChHHHHHHHHCCC
Confidence 444 3999999999996554432 245666665
No 239
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.00 E-value=1.4e-05 Score=85.53 Aligned_cols=35 Identities=20% Similarity=0.156 Sum_probs=32.5
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNY 92 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~ 92 (515)
..||||||||.||++||+.|++.|++|+|||+.+.
T Consensus 5 ~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~ 39 (660)
T 2bs2_A 5 YCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPV 39 (660)
T ss_dssp ECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCG
T ss_pred cccEEEECchHHHHHHHHHHHHCCCcEEEEeccCC
Confidence 47999999999999999999999999999998754
No 240
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.00 E-value=1.3e-05 Score=84.86 Aligned_cols=100 Identities=17% Similarity=0.291 Sum_probs=72.9
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEEEE
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~i 137 (515)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+.- . ...++...+.+.+++.|+++. .+.++..+
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~--~---------~~~~~~~~l~~~l~~~GV~i~-~~~~v~~i 218 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMT--P---------VDREMAGFAHQAIRDQGVDLR-LGTALSEV 218 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCT--T---------SCHHHHHHHHHHHHHTTCEEE-ETCCEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccch--h---------cCHHHHHHHHHHHHHCCCEEE-eCCeEEEE
Confidence 57999999999999999999999999999998764321 1 012344456677888998874 46778888
Q ss_pred ec-------------------CCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCC
Q 010217 138 DA-------------------ENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (515)
Q Consensus 138 d~-------------------~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~ 177 (515)
+. .+..+.+... +++ ++.+|.||+|+|.+|+.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~------~g~--~i~~D~vi~a~G~~p~~ 269 (565)
T 3ntd_A 219 SYQVQTHVASDAAGEDTAHQHIKGHLSLTLS------NGE--LLETDLLIMAIGVRPET 269 (565)
T ss_dssp EEECCCCCCCGGGTCCCTTCCTTCEEEEEET------TSC--EEEESEEEECSCEEECC
T ss_pred eccccccccccccccccccccCCCcEEEEEc------CCC--EEEcCEEEECcCCccch
Confidence 75 2344433321 121 79999999999998864
No 241
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.99 E-value=8.4e-06 Score=84.48 Aligned_cols=103 Identities=16% Similarity=0.259 Sum_probs=75.3
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEEE
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~ 136 (515)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+.+.. . ...++...+.+.+++.|+++ +.+.+|..
T Consensus 190 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~-----~------~~~~~~~~l~~~l~~~Gv~i-~~~~~V~~ 257 (484)
T 3o0h_A 190 LPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILR-----N------FDYDLRQLLNDAMVAKGISI-IYEATVSQ 257 (484)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-----T------SCHHHHHHHHHHHHHHTCEE-ESSCCEEE
T ss_pred cCCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCcccc-----c------cCHHHHHHHHHHHHHCCCEE-EeCCEEEE
Confidence 468999999999999999999999999999998865321 1 01234455677788889886 34678888
Q ss_pred EecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCC
Q 010217 137 IDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFN 179 (515)
Q Consensus 137 id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ 179 (515)
++..+..+.+.... + .++.+|.||+|+|.+|+...
T Consensus 258 i~~~~~~v~v~~~~-----g---~~i~aD~Vi~A~G~~p~~~~ 292 (484)
T 3o0h_A 258 VQSTENCYNVVLTN-----G---QTICADRVMLATGRVPNTTG 292 (484)
T ss_dssp EEECSSSEEEEETT-----S---CEEEESEEEECCCEEECCTT
T ss_pred EEeeCCEEEEEECC-----C---cEEEcCEEEEeeCCCcCCCC
Confidence 88765534333211 1 17899999999999887653
No 242
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.98 E-value=7.6e-06 Score=84.96 Aligned_cols=101 Identities=18% Similarity=0.225 Sum_probs=71.3
Q ss_pred CCeEEEECCcHHHHHHHHhccC----CCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeE
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNN----PSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAE 133 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~----~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~ 133 (515)
.++|+|||||+.|+.+|..|++ .|.+|+++++.+..... .+ +..+...+.+.+++.|++++ .+..
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~-~l---------~~~~~~~~~~~l~~~GV~v~-~~~~ 248 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGK-IL---------PEYLSNWTMEKVRREGVKVM-PNAI 248 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTT-TS---------CHHHHHHHHHHHHTTTCEEE-CSCC
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccccc-cC---------CHHHHHHHHHHHHhcCCEEE-eCCE
Confidence 5799999999999999999874 57899999987542111 11 12334456677888898873 4667
Q ss_pred EEEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCC
Q 010217 134 CFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (515)
Q Consensus 134 v~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~ 177 (515)
|..++.+++.+.+... ++ .++.+|.||+|+|..|+.
T Consensus 249 V~~i~~~~~~~~v~l~------dG--~~i~aD~Vv~a~G~~pn~ 284 (493)
T 1m6i_A 249 VQSVGVSSGKLLIKLK------DG--RKVETDHIVAAVGLEPNV 284 (493)
T ss_dssp EEEEEEETTEEEEEET------TS--CEEEESEEEECCCEEECC
T ss_pred EEEEEecCCeEEEEEC------CC--CEEECCEEEECCCCCccH
Confidence 8888765544333321 11 179999999999999875
No 243
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.97 E-value=5.9e-06 Score=84.24 Aligned_cols=98 Identities=20% Similarity=0.298 Sum_probs=69.2
Q ss_pred ceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEecccccccc--c---------cHHHHHHHHHHhhcCC
Q 010217 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM--F---------DKRITAFAEEKFSRDG 292 (515)
Q Consensus 224 ~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~~--~---------~~~~~~~~~~~l~~~g 292 (515)
++|+|||||+.|+.+|..|+++. .+.+|+|+++.+.+... + ..++...+.+.+++.|
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~------------~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g 70 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLM------------PDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFN 70 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHC------------TTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGT
T ss_pred CCEEEECccHHHHHHHHHHHcCC------------CCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcC
Confidence 48999999999999999998842 36899999998865321 1 0111122335566789
Q ss_pred eEEEcCcEEEEEeCCeEEEEecCCCceEEEecCeEEEccCCCCccch
Q 010217 293 IDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAII 339 (515)
Q Consensus 293 V~v~~~~~v~~i~~~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~ 339 (515)
|+++.+ .++.++.+...+.. .+|+. +.+|.+|+|+|. .|+.
T Consensus 71 v~~~~~-~v~~id~~~~~v~~-~~g~~--i~~d~liiAtG~--~~~~ 111 (430)
T 3h28_A 71 IEFINE-KAESIDPDANTVTT-QSGKK--IEYDYLVIATGP--KLVF 111 (430)
T ss_dssp EEEECS-CEEEEETTTTEEEE-TTCCE--EECSEEEECCCC--EEEC
T ss_pred CEEEEE-EEEEEECCCCEEEE-CCCcE--EECCEEEEcCCc--cccc
Confidence 999975 88999865433332 45664 899999999994 4543
No 244
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=97.97 E-value=9.1e-05 Score=78.22 Aligned_cols=54 Identities=28% Similarity=0.275 Sum_probs=39.0
Q ss_pred HHHHHHHHhhcCCeEEEcCcEEEEEe--C-CeEEEEec--CCCceEEEecCeEEEccCC
Q 010217 280 ITAFAEEKFSRDGIDVKLGSMVVKVT--D-KEIFTKVR--GNGETSSMPYGMVVWSTGI 333 (515)
Q Consensus 280 ~~~~~~~~l~~~gV~v~~~~~v~~i~--~-~~v~~~~~--~~G~~~~i~~D~vi~a~G~ 333 (515)
+...+.+.+++.||+++++++++++. + +.+..+.. .+|+..++.+|.||+|+|.
T Consensus 252 l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg 310 (566)
T 1qo8_A 252 IIDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGG 310 (566)
T ss_dssp HHHHHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCC
Confidence 34555666778899999999999985 3 33332221 3677656999999999994
No 245
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.95 E-value=4.4e-05 Score=73.83 Aligned_cols=91 Identities=21% Similarity=0.222 Sum_probs=68.3
Q ss_pred ceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEE-Eeccccc------------ccccc-----HHHHHHHH
Q 010217 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITL-LEAADHI------------LNMFD-----KRITAFAE 285 (515)
Q Consensus 224 ~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtl-v~~~~~~------------l~~~~-----~~~~~~~~ 285 (515)
++|+|||+|+.|+.+|..|.+. +.+|++ +++. .+ .+.++ .++...+.
T Consensus 5 ~~vvIIG~G~aGl~aA~~l~~~--------------g~~v~li~e~~-~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (315)
T 3r9u_A 5 LDVAIIGGGPAGLSAGLYATRG--------------GLKNVVMFEKG-MPGGQITSSSEIENYPGVAQVMDGISFMAPWS 69 (315)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH--------------TCSCEEEECSS-STTGGGGGCSCBCCSTTCCSCBCHHHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHHC--------------CCCeEEEEeCC-CCCceeeeeceeccCCCCCCCCCHHHHHHHHH
Confidence 5899999999999999999885 578999 8873 21 12222 57788888
Q ss_pred HHhhcCCeEEEcCcEEEEE-eC--CeEEEEecCCCceEEEecCeEEEccCC
Q 010217 286 EKFSRDGIDVKLGSMVVKV-TD--KEIFTKVRGNGETSSMPYGMVVWSTGI 333 (515)
Q Consensus 286 ~~l~~~gV~v~~~~~v~~i-~~--~~v~~~~~~~G~~~~i~~D~vi~a~G~ 333 (515)
+.+++.|++++.+ .+..+ ++ +.+.+....++ ++.+|.+|+|+|.
T Consensus 70 ~~~~~~~v~~~~~-~v~~i~~~~~~~~~v~~~~~~---~~~~d~lvlAtG~ 116 (315)
T 3r9u_A 70 EQCMRFGLKHEMV-GVEQILKNSDGSFTIKLEGGK---TELAKAVIVCTGS 116 (315)
T ss_dssp HHHTTTCCEEECC-CEEEEEECTTSCEEEEETTSC---EEEEEEEEECCCE
T ss_pred HHHHHcCcEEEEE-EEEEEecCCCCcEEEEEecCC---EEEeCEEEEeeCC
Confidence 9999999999998 77777 33 34543122233 4999999999994
No 246
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=97.92 E-value=1.8e-05 Score=84.66 Aligned_cols=34 Identities=6% Similarity=0.090 Sum_probs=31.3
Q ss_pred CCeEEEECCcHHHHHHHHhccCC------CCeEEEEcCCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNP------SYDVQVISPRN 91 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~------g~~V~vie~~~ 91 (515)
..||||||||.||++||+.|++. |.+|+|||+..
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~ 61 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKAS 61 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSC
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecC
Confidence 57999999999999999999976 99999999864
No 247
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=97.92 E-value=8e-05 Score=76.22 Aligned_cols=108 Identities=16% Similarity=0.309 Sum_probs=76.6
Q ss_pred eEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccccc-------------------c----------
Q 010217 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN-------------------M---------- 275 (515)
Q Consensus 225 ~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~-------------------~---------- 275 (515)
.|+|||||++|+.+|..|++. +.+|+|+++.+.+.. .
T Consensus 28 dVvIIGgG~aGl~aA~~la~~--------------G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~ 93 (447)
T 2i0z_A 28 DVIVIGGGPSGLMAAIGAAEE--------------GANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGR 93 (447)
T ss_dssp SEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGG
T ss_pred CEEEECCcHHHHHHHHHHHHC--------------CCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChH
Confidence 799999999999999999874 678999987653210 0
Q ss_pred ---------------------------------c-----cHHHHHHHHHHhhcCCeEEEcCcEEEEEe--CCeEEEEecC
Q 010217 276 ---------------------------------F-----DKRITAFAEEKFSRDGIDVKLGSMVVKVT--DKEIFTKVRG 315 (515)
Q Consensus 276 ---------------------------------~-----~~~~~~~~~~~l~~~gV~v~~~~~v~~i~--~~~v~~~~~~ 315 (515)
+ ...+.+.+.+.+++.||+++++++|+++. ++.+..+.+.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~ 173 (447)
T 2i0z_A 94 FLYSAFSIFNNEDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQ 173 (447)
T ss_dssp GGHHHHHHSCHHHHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEET
T ss_pred HHHHHHHhcCHHHHHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEEC
Confidence 0 12344556677778999999999999985 4454444446
Q ss_pred CCceEEEecCeEEEccCCCCccch------HHHHHHhCC
Q 010217 316 NGETSSMPYGMVVWSTGIAPHAII------KDFMKQVGQ 348 (515)
Q Consensus 316 ~G~~~~i~~D~vi~a~G~~~~p~~------~~l~~~~~~ 348 (515)
+|+ ++.+|.||+|+|....|.. ..+...+|+
T Consensus 174 ~G~--~i~Ad~VVlAtGg~s~~~~g~tG~g~~la~~~G~ 210 (447)
T 2i0z_A 174 TGE--VLETNHVVIAVGGKSVPQTGSTGDGYAWAEKAGH 210 (447)
T ss_dssp TCC--EEECSCEEECCCCSSSGGGSCSSHHHHHHHHTTC
T ss_pred CCC--EEECCEEEECCCCCcCCCCCCCcHHHHHHHHCCC
Confidence 676 3899999999996443321 145566665
No 248
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=97.90 E-value=7.2e-06 Score=84.72 Aligned_cols=40 Identities=23% Similarity=0.267 Sum_probs=37.2
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCC--eEEEEcCCCCCccCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSY--DVQVISPRNYFAFTP 97 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~--~V~vie~~~~~~~~~ 97 (515)
++||+|||||++||+||++|++.|+ +|+|+|+++..|+..
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~ 43 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWI 43 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTC
T ss_pred CceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCce
Confidence 4799999999999999999999999 999999999888764
No 249
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.90 E-value=3.7e-05 Score=80.60 Aligned_cols=98 Identities=19% Similarity=0.231 Sum_probs=73.7
Q ss_pred ceEEEECCChhHHHHHHHHH-HhhHHHHHhhCcccCCCcEEEEEeccccccc--------c-------------------
Q 010217 224 LHFVIVGGGPTGVEFAAELH-DFVDEDLFKLYPKVKDSVKITLLEAADHILN--------M------------------- 275 (515)
Q Consensus 224 ~~vvVvGgG~~g~E~A~~l~-~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~--------~------------------- 275 (515)
.+|+|||||++|+.+|..|. +. +.+|+|+++.+.+.. .
T Consensus 9 ~dVvIIGaG~aGl~aA~~L~~~~--------------G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~ 74 (540)
T 3gwf_A 9 VDAVVIGAGFGGIYAVHKLHHEL--------------GLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLL 74 (540)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHcC--------------CCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccc
Confidence 48999999999999999998 63 679999998653310 0
Q ss_pred ----------ccHHHHHHHHHHhhcCCe--EEEcCcEEEEEeC--C--eEEEEecCCCceEEEecCeEEEccCCCCccc
Q 010217 276 ----------FDKRITAFAEEKFSRDGI--DVKLGSMVVKVTD--K--EIFTKVRGNGETSSMPYGMVVWSTGIAPHAI 338 (515)
Q Consensus 276 ----------~~~~~~~~~~~~l~~~gV--~v~~~~~v~~i~~--~--~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~ 338 (515)
..+++.+++.+.+++.|+ +++++++|++++. + ...+. +.+|++ +.||.||+|+|....|.
T Consensus 75 ~~~~~~~~~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~-~~~G~~--i~ad~lV~AtG~~s~p~ 150 (540)
T 3gwf_A 75 QESTWKTTYITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVT-TDHGEV--YRAKYVVNAVGLLSAIN 150 (540)
T ss_dssp HHCCCSBSEEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEE-ETTSCE--EEEEEEEECCCSCCSBC
T ss_pred cCCCCcccCCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEE-EcCCCE--EEeCEEEECCcccccCC
Confidence 024667778888888898 8999999999863 2 23333 466774 89999999999543443
No 250
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.89 E-value=2.9e-05 Score=81.53 Aligned_cols=98 Identities=19% Similarity=0.268 Sum_probs=73.4
Q ss_pred ceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccccc---------------------c-------
Q 010217 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN---------------------M------- 275 (515)
Q Consensus 224 ~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~---------------------~------- 275 (515)
.+|+|||+|++|+.+|..|.+. +.+|+|+++.+.+.. .
T Consensus 22 ~dVvIIGaG~aGl~aA~~L~~~--------------G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~ 87 (549)
T 4ap3_A 22 YDVVVVGAGIAGLYAIHRFRSQ--------------GLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQ 87 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHH
T ss_pred CCEEEECchHHHHHHHHHHHhC--------------CCCEEEEeCCCCCCCccccCCCCCceeCCCchhccccccccccc
Confidence 4899999999999999999874 679999998654320 0
Q ss_pred ---------ccHHHHHHHHHHhhcCCe--EEEcCcEEEEEeC--C-eEEEEecCCCceEEEecCeEEEccCCCCcc
Q 010217 276 ---------FDKRITAFAEEKFSRDGI--DVKLGSMVVKVTD--K-EIFTKVRGNGETSSMPYGMVVWSTGIAPHA 337 (515)
Q Consensus 276 ---------~~~~~~~~~~~~l~~~gV--~v~~~~~v~~i~~--~-~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p 337 (515)
-.+++.+++.+.+++.|+ +++++++|++++. + ....+.+.+|++ +.||.||+|+|....|
T Consensus 88 ~~~~~~~~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~--i~ad~lV~AtG~~s~p 161 (549)
T 4ap3_A 88 EWNWSEKYATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDE--VSARFLVVAAGPLSNA 161 (549)
T ss_dssp HCCCSSSSCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCE--EEEEEEEECCCSEEEC
T ss_pred CCCCccCCCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCE--EEeCEEEECcCCCCCC
Confidence 124677788888888898 8999999999862 2 122333467774 8999999999943333
No 251
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.87 E-value=9.7e-06 Score=80.55 Aligned_cols=42 Identities=21% Similarity=0.257 Sum_probs=38.1
Q ss_pred CCCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCC-CCCccCC
Q 010217 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR-NYFAFTP 97 (515)
Q Consensus 56 ~~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~-~~~~~~~ 97 (515)
...++|+|||||++||+||+.|.+.|++|+|+|++ +..|+..
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~ 84 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRI 84 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCce
Confidence 45689999999999999999999999999999999 8888754
No 252
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=97.87 E-value=7e-05 Score=75.33 Aligned_cols=93 Identities=17% Similarity=0.255 Sum_probs=68.8
Q ss_pred ceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEecccccc------------------------------
Q 010217 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL------------------------------ 273 (515)
Q Consensus 224 ~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l------------------------------ 273 (515)
.+|+|||||++|+.+|..|.+. |.+|+|+++.+.+.
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~--------------G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~ 72 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQ--------------GHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGG 72 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTC
T ss_pred CCEEEECcCHHHHHHHHHHHhC--------------CCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCC
Confidence 3899999999999999999985 56777777654320
Q ss_pred ---------------cc--------------c-cHHHHHHHHHHhhcC-CeEEEcCcEEEEEeC--CeE--EEEecCCCc
Q 010217 274 ---------------NM--------------F-DKRITAFAEEKFSRD-GIDVKLGSMVVKVTD--KEI--FTKVRGNGE 318 (515)
Q Consensus 274 ---------------~~--------------~-~~~~~~~~~~~l~~~-gV~v~~~~~v~~i~~--~~v--~~~~~~~G~ 318 (515)
.. . ...+.+.+.+.+++. ||+++++++|++++. +++ .+. ..+|+
T Consensus 73 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~-~~~g~ 151 (399)
T 2x3n_A 73 RVRHELEVYHDGELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVR-LNDGR 151 (399)
T ss_dssp EEECEEEEEETTEEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEE-ETTSC
T ss_pred CcceeEEEeCCCCEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEE-ECCCC
Confidence 00 0 124556667777777 999999999999963 445 444 35676
Q ss_pred eEEEecCeEEEccCC
Q 010217 319 TSSMPYGMVVWSTGI 333 (515)
Q Consensus 319 ~~~i~~D~vi~a~G~ 333 (515)
. +.+|.||.|+|.
T Consensus 152 ~--~~ad~vV~AdG~ 164 (399)
T 2x3n_A 152 V--LRPRVVVGADGI 164 (399)
T ss_dssp E--EEEEEEEECCCT
T ss_pred E--EECCEEEECCCC
Confidence 4 899999999994
No 253
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.84 E-value=2.5e-05 Score=80.43 Aligned_cols=102 Identities=13% Similarity=0.170 Sum_probs=74.7
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEEE
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~ 136 (515)
..++++|||+|+.|+.+|..|++.|.+|+++++.+.+. +. ...++...+.+.+++.|+++. .++.|..
T Consensus 169 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l--~~---------~~~~~~~~l~~~l~~~Gv~i~-~~~~v~~ 236 (463)
T 4dna_A 169 LPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEIL--SR---------FDQDMRRGLHAAMEEKGIRIL-CEDIIQS 236 (463)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS--TT---------SCHHHHHHHHHHHHHTTCEEE-CSCCEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc--cc---------cCHHHHHHHHHHHHHCCCEEE-CCCEEEE
Confidence 46899999999999999999999999999999886532 11 012445556778888998873 4678888
Q ss_pred EecCC-CEEEEe-eCCccCCCCCceEEeecCEEEEccCCCcCCCC
Q 010217 137 IDAEN-KKVYCR-SSQNTNLNGKEEFCMDYDYLVIAMGARANTFN 179 (515)
Q Consensus 137 id~~~-~~v~~~-~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~ 179 (515)
++..+ +.+.+. .. ++ ++.+|.||+|+|.+|+...
T Consensus 237 i~~~~~~~~~v~~~~------~g---~i~aD~Vv~a~G~~p~~~~ 272 (463)
T 4dna_A 237 VSADADGRRVATTMK------HG---EIVADQVMLALGRMPNTNG 272 (463)
T ss_dssp EEECTTSCEEEEESS------SC---EEEESEEEECSCEEESCTT
T ss_pred EEEcCCCEEEEEEcC------CC---eEEeCEEEEeeCcccCCCC
Confidence 87653 223333 21 22 3899999999999887653
No 254
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.83 E-value=5.7e-05 Score=77.66 Aligned_cols=105 Identities=16% Similarity=0.202 Sum_probs=71.3
Q ss_pred ceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccccc-----------------------------
Q 010217 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN----------------------------- 274 (515)
Q Consensus 224 ~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~----------------------------- 274 (515)
..|+|||+|+.|+.+|..|.+.+... ...+|+++++.+.+..
T Consensus 31 ~dVvIIGaG~aGl~aA~~L~~~g~~~---------~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~ 101 (463)
T 3s5w_A 31 HDLIGVGFGPSNIALAIALQERAQAQ---------GALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPY 101 (463)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHHHHH---------CCCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTT
T ss_pred CCEEEECCCHHHHHHHHHHHhccccc---------CcccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCC
Confidence 37999999999999999999864110 0068999988773210
Q ss_pred -------------------c---ccHHHHHHHHHHhhcCCeEEEcCcEEEEEeC----Ce---EEEEec-CCCceEEEec
Q 010217 275 -------------------M---FDKRITAFAEEKFSRDGIDVKLGSMVVKVTD----KE---IFTKVR-GNGETSSMPY 324 (515)
Q Consensus 275 -------------------~---~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~----~~---v~~~~~-~~G~~~~i~~ 324 (515)
. ...++.+++....++.+++++++++|++++. ++ +.+... .+|+..++.+
T Consensus 102 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~ 181 (463)
T 3s5w_A 102 SFVNYLHKHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTT 181 (463)
T ss_dssp SHHHHHHHTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEE
T ss_pred ChhHhhhhcCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEe
Confidence 0 0134456666666777999999999999864 22 233321 2244446999
Q ss_pred CeEEEccCCCCccch
Q 010217 325 GMVVWSTGIAPHAII 339 (515)
Q Consensus 325 D~vi~a~G~~~~p~~ 339 (515)
|.||+|+|. .|.+
T Consensus 182 d~lVlAtG~--~p~~ 194 (463)
T 3s5w_A 182 RALVVSPGG--TPRI 194 (463)
T ss_dssp SEEEECCCC--EECC
T ss_pred CEEEECCCC--CCCC
Confidence 999999994 5544
No 255
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.83 E-value=4.2e-05 Score=80.29 Aligned_cols=99 Identities=15% Similarity=0.225 Sum_probs=72.5
Q ss_pred ceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccccc-----------------------------
Q 010217 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN----------------------------- 274 (515)
Q Consensus 224 ~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~----------------------------- 274 (515)
.+|+|||||+.|+.+|..|.+. +.+|+|+++.+.+..
T Consensus 10 ~dVvIIGaG~aGl~aA~~L~~~--------------g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~ 75 (545)
T 3uox_A 10 LDAVVIGAGVTGIYQAFLINQA--------------GMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIP 75 (545)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSST
T ss_pred CCEEEECccHHHHHHHHHHHhC--------------CCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCccccc
Confidence 4899999999999999999874 679999999764310
Q ss_pred --------cccHHHHHHHHHHhhcCCe--EEEcCcEEEEEeCC---eEEEEecCCCceEEEecCeEEEccCCCCccc
Q 010217 275 --------MFDKRITAFAEEKFSRDGI--DVKLGSMVVKVTDK---EIFTKVRGNGETSSMPYGMVVWSTGIAPHAI 338 (515)
Q Consensus 275 --------~~~~~~~~~~~~~l~~~gV--~v~~~~~v~~i~~~---~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~ 338 (515)
.-.+++.+++...+++.|+ .++++++|++++.+ +...+.+.+|++ +.||.||+|+|....|.
T Consensus 76 ~~~~~~~~~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~--~~ad~lV~AtG~~s~p~ 150 (545)
T 3uox_A 76 EWEWSENFASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEV--VTCRFLISATGPLSASR 150 (545)
T ss_dssp TCCCSBSSCBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEE--EEEEEEEECCCSCBC--
T ss_pred CCCccccCCCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCE--EEeCEEEECcCCCCCCc
Confidence 0125677778888888887 78899999998632 222333467764 89999999999543443
No 256
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.83 E-value=4.3e-05 Score=82.74 Aligned_cols=103 Identities=17% Similarity=0.168 Sum_probs=74.0
Q ss_pred CCCeEEEEC--CcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEE
Q 010217 57 KKKKVVVLG--TGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAEC 134 (515)
Q Consensus 57 ~~~~VvIIG--gG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v 134 (515)
..++|+||| +|+.|+.+|..|+..|.+|+++++.+.+... . ........+.+.+++.|+++ +.+++|
T Consensus 522 ~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~-----~-----~~~~~~~~l~~~l~~~GV~i-~~~~~V 590 (690)
T 3k30_A 522 DGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSW-----T-----NNTFEVNRIQRRLIENGVAR-VTDHAV 590 (690)
T ss_dssp SSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGG-----G-----GGGTCHHHHHHHHHHTTCEE-EESEEE
T ss_pred CCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccccc-----c-----ccchhHHHHHHHHHHCCCEE-EcCcEE
Confidence 457899999 9999999999999999999999987653211 0 11123344667788899987 457889
Q ss_pred EEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCC
Q 010217 135 FKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (515)
Q Consensus 135 ~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~ 177 (515)
..|+.++..+.... .++..++.+|.||+|+|..|+.
T Consensus 591 ~~i~~~~~~v~~~~-------~~~~~~i~aD~VV~A~G~~p~~ 626 (690)
T 3k30_A 591 VAVGAGGVTVRDTY-------ASIERELECDAVVMVTARLPRE 626 (690)
T ss_dssp EEEETTEEEEEETT-------TCCEEEEECSEEEEESCEEECC
T ss_pred EEEECCeEEEEEcc-------CCeEEEEECCEEEECCCCCCCh
Confidence 99986643333221 1223479999999999998753
No 257
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.82 E-value=9.6e-05 Score=71.47 Aligned_cols=102 Identities=16% Similarity=0.241 Sum_probs=63.4
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEEE
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~ 136 (515)
..++|+|||||+.|+.+|..|++.|.+|+|+++.+..... ...........++.. +....+..
T Consensus 151 ~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~~~~----------------~~~~~~~~~~~~~~~-~~~~~~~~ 213 (314)
T 4a5l_A 151 RNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFRAS----------------KTMQERVLNHPKIEV-IWNSELVE 213 (314)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCSC----------------HHHHHHHHTCTTEEE-ECSEEEEE
T ss_pred CCCeEEEECCChHHHHHHHHHHHhCCeeeeeccccccccc----------------chhhhhhhcccceee-EeeeeeEE
Confidence 3579999999999999999999999999999976432110 001112222233222 22333344
Q ss_pred EecCC---CEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCCCC
Q 010217 137 IDAEN---KKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNT 180 (515)
Q Consensus 137 id~~~---~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~i 180 (515)
+.... ..+.+.+.. .++...+++|.|++|+|..|+...+
T Consensus 214 i~~~~~~~~~~~~~~~~-----~~~~~~i~~d~vi~a~G~~pn~~~l 255 (314)
T 4a5l_A 214 LEGDGDLLNGAKIHNLV-----SGEYKVVPVAGLFYAIGHSPNSKFL 255 (314)
T ss_dssp EEESSSSEEEEEEEETT-----TCCEEEEECSEEEECSCEEESCGGG
T ss_pred EEeeeeccceeEEeecc-----cccceeeccccceEecccccChhHh
Confidence 43222 234444322 2334589999999999999876533
No 258
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.82 E-value=1e-05 Score=82.13 Aligned_cols=41 Identities=17% Similarity=0.236 Sum_probs=37.7
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCC-CeEEEEcCCCCCccCC
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPS-YDVQVISPRNYFAFTP 97 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g-~~V~vie~~~~~~~~~ 97 (515)
+.+||+|||||++||+||..|++.| ++|+|+|+++..|+..
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~ 46 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKC 46 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcc
Confidence 4679999999999999999999999 9999999999988764
No 259
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=97.81 E-value=1e-05 Score=82.98 Aligned_cols=41 Identities=22% Similarity=0.219 Sum_probs=38.3
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCC
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTP 97 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~ 97 (515)
..+||||||||++|++||..|++.|++|+|+|+++++|+..
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~ 50 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEA 50 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGG
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccc
Confidence 45899999999999999999999999999999999998864
No 260
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=97.80 E-value=1e-05 Score=84.70 Aligned_cols=71 Identities=18% Similarity=0.238 Sum_probs=49.5
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCc-cc--c---cccccchHHHHhhcCceE
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGT-VE--A---RSIVEPVRNIVRKKNVDI 127 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~-~~--~---~~~~~~~~~~~~~~~i~v 127 (515)
+.+||+|||||+|||+||..|++.|++|+|+|+++..|+.........+. .+ . ......+.+++++.|++.
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lgl~~ 79 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPTQNRILRLAKELGLET 79 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEECCTTTSCEESSCCEECTTCHHHHHHHHHTTCCE
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceeecccCCCcccccCceEecCCcHHHHHHHHHcCCcc
Confidence 35799999999999999999999999999999999988764322111011 00 0 011234567788888763
No 261
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=97.80 E-value=0.00014 Score=76.95 Aligned_cols=53 Identities=15% Similarity=0.164 Sum_probs=39.1
Q ss_pred HHHHHHHHhhcCCeEEEcCcEEEEEe--C-CeE---EEEecCCCceEEEecCeEEEccCC
Q 010217 280 ITAFAEEKFSRDGIDVKLGSMVVKVT--D-KEI---FTKVRGNGETSSMPYGMVVWSTGI 333 (515)
Q Consensus 280 ~~~~~~~~l~~~gV~v~~~~~v~~i~--~-~~v---~~~~~~~G~~~~i~~D~vi~a~G~ 333 (515)
+...+.+.+++.||+++++++++++. + +.+ .+.. .+|+..++.+|.||+|+|.
T Consensus 257 l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~-~~g~~~~i~a~~VVlAtGg 315 (571)
T 1y0p_A 257 VVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKG-MYKGYYWVKADAVILATGG 315 (571)
T ss_dssp HHHHHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEE-TTTEEEEEECSEEEECCCC
T ss_pred HHHHHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEe-CCCcEEEEECCeEEEeCCC
Confidence 44556666778899999999999985 2 333 3332 3677667999999999994
No 262
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=97.80 E-value=5.3e-06 Score=85.41 Aligned_cols=41 Identities=17% Similarity=0.244 Sum_probs=36.6
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCC------CeEEEEcCCCCCccCC
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPS------YDVQVISPRNYFAFTP 97 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g------~~V~vie~~~~~~~~~ 97 (515)
+++||+|||||++||+||++|++.| ++|+|+|+++..|+..
T Consensus 4 ~~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~ 50 (470)
T 3i6d_A 4 GKKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKI 50 (470)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceE
Confidence 3579999999999999999999988 9999999998887753
No 263
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.79 E-value=0.00012 Score=76.35 Aligned_cols=94 Identities=17% Similarity=0.215 Sum_probs=71.3
Q ss_pred cceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccc--ccc--------c----cccHHHHHHHHHHh
Q 010217 223 ILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAAD--HIL--------N----MFDKRITAFAEEKF 288 (515)
Q Consensus 223 ~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~--~~l--------~----~~~~~~~~~~~~~l 288 (515)
..+|+|||||+.|+.+|..|++. +.+|+++++.. .+. . ...+.+...+.+.+
T Consensus 212 ~~dVvIIGgG~AGl~aA~~la~~--------------G~~v~lie~~~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 277 (521)
T 1hyu_A 212 AYDVLIVGSGPAGAAAAVYSARK--------------GIRTGLMGERFGGQVLDTVDIENYISVPKTEGQKLAGALKAHV 277 (521)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSTTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHH
T ss_pred cccEEEECCcHHHHHHHHHHHhC--------------CCeEEEEECCCCCcccccccccccCCCCCCCHHHHHHHHHHHH
Confidence 35899999999999999999884 67899997531 111 0 12356777888888
Q ss_pred hcCCeEEEcCcEEEEEeCC-----eEEEEecCCCceEEEecCeEEEccCC
Q 010217 289 SRDGIDVKLGSMVVKVTDK-----EIFTKVRGNGETSSMPYGMVVWSTGI 333 (515)
Q Consensus 289 ~~~gV~v~~~~~v~~i~~~-----~v~~~~~~~G~~~~i~~D~vi~a~G~ 333 (515)
++.||+++.++++..++.+ ...+. +.+|+. +.+|.||+|+|.
T Consensus 278 ~~~gv~v~~~~~v~~i~~~~~~~~~~~V~-~~~g~~--~~~d~vVlAtG~ 324 (521)
T 1hyu_A 278 SDYDVDVIDSQSASKLVPAATEGGLHQIE-TASGAV--LKARSIIIATGA 324 (521)
T ss_dssp HTSCEEEECSCCEEEEECCSSTTSCEEEE-ETTSCE--EEEEEEEECCCE
T ss_pred HHcCCEEEcCCEEEEEEeccCCCceEEEE-ECCCCE--EEcCEEEECCCC
Confidence 9999999999999999632 33333 356764 899999999994
No 264
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=97.78 E-value=0.00012 Score=73.66 Aligned_cols=101 Identities=14% Similarity=0.248 Sum_probs=69.3
Q ss_pred ceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccccc------cccHHHHHHHH------------
Q 010217 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN------MFDKRITAFAE------------ 285 (515)
Q Consensus 224 ~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~------~~~~~~~~~~~------------ 285 (515)
.+|+|||||++|+.+|..|.+. |.+|+|+++.+.... .+.+...+.+.
T Consensus 6 ~~V~IVGaG~aGl~~A~~L~~~--------------G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~ 71 (397)
T 2vou_A 6 DRIAVVGGSISGLTAALMLRDA--------------GVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVP 71 (397)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--------------TCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBC
T ss_pred CcEEEECCCHHHHHHHHHHHhC--------------CCCEEEEecCCCCCCccccccccChhHHHHHHHcCCcccccccc
Confidence 4899999999999999999985 689999998765311 12222222221
Q ss_pred -------------------------------HHhhc--CCeEEEcCcEEEEEeC--CeEEEEecCCCceEEEecCeEEEc
Q 010217 286 -------------------------------EKFSR--DGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWS 330 (515)
Q Consensus 286 -------------------------------~~l~~--~gV~v~~~~~v~~i~~--~~v~~~~~~~G~~~~i~~D~vi~a 330 (515)
+.|.+ .|++++++++|++++. +++.+.. .+|++ +.+|.||.|
T Consensus 72 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~-~~g~~--~~ad~vV~A 148 (397)
T 2vou_A 72 SSSMEYVDALTGERVGSVPADWRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDSETVQMRF-SDGTK--AEANWVIGA 148 (397)
T ss_dssp CCEEEEEETTTCCEEEEEECCCCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECSSCEEEEE-TTSCE--EEESEEEEC
T ss_pred ccceEEEecCCCCccccccCcccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecCCEEEEEE-CCCCE--EECCEEEEC
Confidence 11111 3788999999999963 4565543 56764 899999999
Q ss_pred cCCCCccchHHHH
Q 010217 331 TGIAPHAIIKDFM 343 (515)
Q Consensus 331 ~G~~~~p~~~~l~ 343 (515)
.|. ...+...+
T Consensus 149 dG~--~S~vr~~~ 159 (397)
T 2vou_A 149 DGG--ASVVRKRL 159 (397)
T ss_dssp CCT--TCHHHHHH
T ss_pred CCc--chhHHHHh
Confidence 994 55554443
No 265
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.78 E-value=8.7e-06 Score=85.11 Aligned_cols=40 Identities=30% Similarity=0.421 Sum_probs=37.5
Q ss_pred CCeEEEECCcHHHHHHHHhccCCC-CeEEEEcCCCCCccCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPS-YDVQVISPRNYFAFTP 97 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g-~~V~vie~~~~~~~~~ 97 (515)
.++|+|||||+|||+||..|.+.| ++|+|+|+++..|+..
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~ 48 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRL 48 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCce
Confidence 579999999999999999999999 9999999999998864
No 266
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.78 E-value=3.2e-05 Score=80.36 Aligned_cols=101 Identities=15% Similarity=0.286 Sum_probs=71.4
Q ss_pred CeEEEECCcHHHHHHHHhccC--------------CCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcC
Q 010217 59 KKVVVLGTGWAGTSFLKNLNN--------------PSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKN 124 (515)
Q Consensus 59 ~~VvIIGgG~AGlsaA~~L~~--------------~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 124 (515)
.+++|||||+.|+.+|..|+. .+.+|+|||..+.+.- .+ ...+.....+.+++.|
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~--~~---------~~~~~~~~~~~L~~~G 286 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLN--MF---------EKKLSSYAQSHLENTS 286 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSST--TS---------CHHHHHHHHHHHHHTT
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEecccccccc--CC---------CHHHHHHHHHHHHhcc
Confidence 479999999999999988763 2468999998875321 11 1245555778889999
Q ss_pred ceEEEEEeEEEEEecCCCEEEEeeCCccCCCCC-ceEEeecCEEEEccCCCcC
Q 010217 125 VDICFWEAECFKIDAENKKVYCRSSQNTNLNGK-EEFCMDYDYLVIAMGARAN 176 (515)
Q Consensus 125 i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~-~~~~~~~d~lviAtG~~~~ 176 (515)
|+++ .++.|..++.+...+...... +. ...++++|.||+|+|..|+
T Consensus 287 V~v~-~~~~v~~v~~~~~~~~~~~~d-----g~~~~~~i~ad~viwa~Gv~~~ 333 (502)
T 4g6h_A 287 IKVH-LRTAVAKVEEKQLLAKTKHED-----GKITEETIPYGTLIWATGNKAR 333 (502)
T ss_dssp CEEE-TTEEEEEECSSEEEEEEECTT-----SCEEEEEEECSEEEECCCEECC
T ss_pred eeee-cCceEEEEeCCceEEEEEecC-----cccceeeeccCEEEEccCCcCC
Confidence 9984 588899998664433333211 11 1247999999999998765
No 267
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=97.77 E-value=0.00014 Score=72.91 Aligned_cols=95 Identities=19% Similarity=0.302 Sum_probs=69.3
Q ss_pred eEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccc----------c-c-------------------
Q 010217 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHI----------L-N------------------- 274 (515)
Q Consensus 225 ~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~----------l-~------------------- 274 (515)
+|+|||||++|+.+|..|.+. |.+|+|+++.+.. + +
T Consensus 4 dV~IvGaG~aGl~~A~~L~~~--------------G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~ 69 (394)
T 1k0i_A 4 QVAIIGAGPSGLLLGQLLHKA--------------GIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDG 69 (394)
T ss_dssp SEEEECCSHHHHHHHHHHHHH--------------TCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHC
T ss_pred cEEEECCCHHHHHHHHHHHHC--------------CCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcC
Confidence 799999999999999999986 5788888876531 0 0
Q ss_pred ---------------c--------------cc-HHHHHHHHHHhhcCCeEEEcCcEEEEEeCC---eEEEEecCCCceEE
Q 010217 275 ---------------M--------------FD-KRITAFAEEKFSRDGIDVKLGSMVVKVTDK---EIFTKVRGNGETSS 321 (515)
Q Consensus 275 ---------------~--------------~~-~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~---~v~~~~~~~G~~~~ 321 (515)
. ++ ..+.+.+.+.+.+.|++++++++|++++.+ .+.+....+|+..+
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~ 149 (394)
T 1k0i_A 70 LVHEGVEIAFAGQRRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLR 149 (394)
T ss_dssp EEESCEEEEETTEEEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEE
T ss_pred CccceEEEEECCceEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEE
Confidence 0 01 234455666677789999999999999742 34443214677546
Q ss_pred EecCeEEEccCC
Q 010217 322 MPYGMVVWSTGI 333 (515)
Q Consensus 322 i~~D~vi~a~G~ 333 (515)
+.+|+||.|.|.
T Consensus 150 ~~a~~vV~AdG~ 161 (394)
T 1k0i_A 150 LDCDYIAGCDGF 161 (394)
T ss_dssp EECSEEEECCCT
T ss_pred EEeCEEEECCCC
Confidence 999999999995
No 268
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.77 E-value=1.5e-05 Score=82.58 Aligned_cols=42 Identities=31% Similarity=0.302 Sum_probs=38.2
Q ss_pred CCCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCC
Q 010217 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTP 97 (515)
Q Consensus 56 ~~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~ 97 (515)
...++|+|||||+|||+||+.|++.|++|+|+|+++..|+..
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~ 50 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRV 50 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTC
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCce
Confidence 346899999999999999999999999999999999888753
No 269
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=97.77 E-value=0.00011 Score=78.82 Aligned_cols=36 Identities=11% Similarity=0.316 Sum_probs=32.5
Q ss_pred CCCeEEEECCcHHHHHHHHhcc---C-CCCeEEEEcCCCC
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLN---N-PSYDVQVISPRNY 92 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~---~-~g~~V~vie~~~~ 92 (515)
...||||||||+||++||+.|+ + .|.+|+|||+...
T Consensus 21 ~~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~ 60 (643)
T 1jnr_A 21 VETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAV 60 (643)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCT
T ss_pred ccCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCC
Confidence 3579999999999999999999 6 8999999998763
No 270
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.76 E-value=1.5e-05 Score=81.72 Aligned_cols=88 Identities=17% Similarity=0.210 Sum_probs=67.7
Q ss_pred ccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccc-------ccc--ccHHHHHHHHHHhhcCC
Q 010217 222 RILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHI-------LNM--FDKRITAFAEEKFSRDG 292 (515)
Q Consensus 222 ~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~-------l~~--~~~~~~~~~~~~l~~~g 292 (515)
..++|+|||+|+.|+.+|..|.+. +.+|+|+++.+.+ ++. ++.++.+...+.+++.|
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~--------------G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~g 186 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAK--------------GYEVHVYDRYDRMGGLLVYGIPGFKLEKSVVERRVKLLADAG 186 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHH--------------TCCEEEECSSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--------------CCeEEEEeccCCCCCeeeecCCCccCCHHHHHHHHHHHHHCC
Confidence 567999999999999999999986 6799999998765 232 35667777788899999
Q ss_pred eEEEcCcEEEEEeCCeEEEEecCCCceEEEecCeEEEccCC
Q 010217 293 IDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGI 333 (515)
Q Consensus 293 V~v~~~~~v~~i~~~~v~~~~~~~G~~~~i~~D~vi~a~G~ 333 (515)
|++++++.+. ..+.+ .++. +.+|.||+|+|.
T Consensus 187 v~~~~~~~v~----~~v~~---~~~~---~~~d~vvlAtG~ 217 (456)
T 2vdc_G 187 VIYHPNFEVG----RDASL---PELR---RKHVAVLVATGV 217 (456)
T ss_dssp CEEETTCCBT----TTBCH---HHHH---SSCSEEEECCCC
T ss_pred cEEEeCCEec----cEEEh---hHhH---hhCCEEEEecCC
Confidence 9999998652 11211 1222 679999999995
No 271
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.75 E-value=0.00012 Score=75.41 Aligned_cols=93 Identities=13% Similarity=0.210 Sum_probs=69.1
Q ss_pred eEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEecccccccc-----------------------------
Q 010217 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM----------------------------- 275 (515)
Q Consensus 225 ~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~~----------------------------- 275 (515)
.|+|||+|+.|+.+|..|++. +.+|+++++.+.+...
T Consensus 6 DVvVIGgG~aGl~aA~~l~~~--------------G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~ 71 (466)
T 3l8k_A 6 DVVVIGAGGAGYHGAFRLAKA--------------KYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVK 71 (466)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--------------TCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSC
T ss_pred eEEEECCCHHHHHHHHHHHhC--------------CCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCC
Confidence 799999999999999999885 6899999976654211
Q ss_pred --cc-HH----------HH--HHHHHHhhcCCeEEEcCcEEEEEeCCeEEEEecCCCceEEEecCeEEEccCC
Q 010217 276 --FD-KR----------IT--AFAEEKFSRDGIDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGI 333 (515)
Q Consensus 276 --~~-~~----------~~--~~~~~~l~~~gV~v~~~~~v~~i~~~~v~~~~~~~G~~~~i~~D~vi~a~G~ 333 (515)
++ .. +. ..+...+++.||+++.+ .+..++.+.+.+.. .+|+..++.+|.+|+|||.
T Consensus 72 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g-~v~~id~~~~~V~~-~~g~~~~~~~d~lviAtG~ 142 (466)
T 3l8k_A 72 IPLDFSTVQDRKDYVQELRFKQHKRNMSQYETLTFYKG-YVKIKDPTHVIVKT-DEGKEIEAETRYMIIASGA 142 (466)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEESE-EEEEEETTEEEEEE-TTSCEEEEEEEEEEECCCE
T ss_pred CCcCHHHHHHHHHhheeccccchHHHHHHhCCCEEEEe-EEEEecCCeEEEEc-CCCcEEEEecCEEEECCCC
Confidence 00 00 11 44555677889999988 67788877766654 5676545899999999994
No 272
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=97.74 E-value=0.00017 Score=76.29 Aligned_cols=64 Identities=17% Similarity=0.195 Sum_probs=43.3
Q ss_pred HHHHHHHHhhcCCeEEEcCcEEEEEe--C-CeE---EEEecCCCceEEEecCeEEEccCCCCccchHHHHHHh
Q 010217 280 ITAFAEEKFSRDGIDVKLGSMVVKVT--D-KEI---FTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQV 346 (515)
Q Consensus 280 ~~~~~~~~l~~~gV~v~~~~~v~~i~--~-~~v---~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~ 346 (515)
+...+.+.+++.||+++++++++++. + +.+ .+.. .+|+..++.+|.||+|+|. .+...+++...
T Consensus 257 l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~-~~G~~~~i~A~~VVlAtGg--~~~~~~~~~~~ 326 (572)
T 1d4d_A 257 VAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKG-EYTGYYVIKADAVVIAAGG--FAKNNERVSKY 326 (572)
T ss_dssp HHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEE-TTTEEEEEECSEEEECCCC--CTTCHHHHHHH
T ss_pred HHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEe-CCCcEEEEEcCEEEEeCCC--CccCHHHHHHh
Confidence 44556667778899999999999984 2 333 3332 3677667999999999994 33333554443
No 273
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=97.74 E-value=0.00012 Score=74.00 Aligned_cols=96 Identities=18% Similarity=0.302 Sum_probs=69.7
Q ss_pred ceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccc--------ccc--------------------
Q 010217 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHI--------LNM-------------------- 275 (515)
Q Consensus 224 ~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~--------l~~-------------------- 275 (515)
.+|+|||||++|+-+|..|++. |.+|+|+++.+.. .+.
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~--------------G~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~ 71 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKS--------------GFKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQ 71 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTT--------------TCCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCE
T ss_pred CcEEEECCCHHHHHHHHHHHhC--------------CCCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCc
Confidence 3899999999999999999874 6788988876410 000
Q ss_pred -------------------------------c-cHHHHHHHHHHhhcCCeEEEcCcEEEEEeC--CeEE-EEecCCCceE
Q 010217 276 -------------------------------F-DKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIF-TKVRGNGETS 320 (515)
Q Consensus 276 -------------------------------~-~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~--~~v~-~~~~~~G~~~ 320 (515)
+ ...+...+.+.+++.|++++.+++|++++. ++.. .+.+.+|+..
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~ 151 (421)
T 3nix_A 72 QKFGAKFVRGKEIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKR 151 (421)
T ss_dssp EECEEEEEETTEEEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEE
T ss_pred ccCCcEEEeCCeeEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEE
Confidence 0 123445566667778999999999999863 3432 2233678765
Q ss_pred EEecCeEEEccCC
Q 010217 321 SMPYGMVVWSTGI 333 (515)
Q Consensus 321 ~i~~D~vi~a~G~ 333 (515)
++.+|.||.|+|.
T Consensus 152 ~~~a~~vV~A~G~ 164 (421)
T 3nix_A 152 EIEARFIIDASGY 164 (421)
T ss_dssp EEEEEEEEECCGG
T ss_pred EEEcCEEEECCCC
Confidence 6999999999994
No 274
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.73 E-value=1.4e-05 Score=80.67 Aligned_cols=42 Identities=17% Similarity=0.292 Sum_probs=38.0
Q ss_pred CCCeEEEECCcHHHHHHHHhccCC-CCeEEEEcCCCCCccCCc
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNP-SYDVQVISPRNYFAFTPL 98 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~-g~~V~vie~~~~~~~~~~ 98 (515)
..+||+|||||++|++||..|++. |++|+|+|+++.+|+...
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~ 48 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAY 48 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGC
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeee
Confidence 358999999999999999999987 999999999999888643
No 275
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.73 E-value=1.9e-05 Score=81.64 Aligned_cols=42 Identities=17% Similarity=0.241 Sum_probs=36.9
Q ss_pred CCCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCC
Q 010217 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTP 97 (515)
Q Consensus 56 ~~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~ 97 (515)
...+||+|||||++||+||..|++.|++|+|+|+++..|+..
T Consensus 14 ~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~ 55 (478)
T 2ivd_A 14 TTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAV 55 (478)
T ss_dssp ---CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCcee
Confidence 346899999999999999999999999999999999988764
No 276
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.72 E-value=1.4e-05 Score=81.52 Aligned_cols=36 Identities=31% Similarity=0.379 Sum_probs=31.9
Q ss_pred CCCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCC
Q 010217 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (515)
Q Consensus 56 ~~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~ 91 (515)
.++++|+|||||++|+++|..|++.|++|+|||+.+
T Consensus 20 ~m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 20 HMKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp ---CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 356899999999999999999999999999999876
No 277
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.71 E-value=3.4e-05 Score=82.95 Aligned_cols=35 Identities=29% Similarity=0.456 Sum_probs=32.3
Q ss_pred CCeEEEECCcHHHHHHHHhccC-----CCCeEEEEcCCCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNN-----PSYDVQVISPRNY 92 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~-----~g~~V~vie~~~~ 92 (515)
..+|+||||||+||++|..|++ .|++|+|||+.+.
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~ 47 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRST 47 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCC
Confidence 5799999999999999999999 9999999998754
No 278
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.70 E-value=1.9e-05 Score=79.07 Aligned_cols=42 Identities=19% Similarity=0.335 Sum_probs=38.1
Q ss_pred CCCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCC
Q 010217 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTP 97 (515)
Q Consensus 56 ~~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~ 97 (515)
...++|+|||||++|+++|..|++.|++|+|+|+++.+|+..
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~ 68 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNA 68 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGG
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCcc
Confidence 346899999999999999999999999999999998888754
No 279
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=97.70 E-value=0.00022 Score=69.66 Aligned_cols=91 Identities=16% Similarity=0.269 Sum_probs=63.9
Q ss_pred eEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccccc--------------------cccHHHHHHH
Q 010217 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN--------------------MFDKRITAFA 284 (515)
Q Consensus 225 ~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~--------------------~~~~~~~~~~ 284 (515)
+|+|||||++|+.+|..|.+. |.+|+|+++.+.+.. ...+...+.+
T Consensus 4 dV~IIGaG~~Gl~~A~~L~~~--------------G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (336)
T 1yvv_A 4 PIAIIGTGIAGLSAAQALTAA--------------GHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAV 69 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHH
T ss_pred eEEEECCcHHHHHHHHHHHHC--------------CCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHH
Confidence 799999999999999999985 689999998764310 0112222222
Q ss_pred HH-------------------------------------------HhhcCCeEEEcCcEEEEEeC--CeEEEEecCCCce
Q 010217 285 EE-------------------------------------------KFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGET 319 (515)
Q Consensus 285 ~~-------------------------------------------~l~~~gV~v~~~~~v~~i~~--~~v~~~~~~~G~~ 319 (515)
.. .+. .|++++++++|++++. +++.+. +.+|+.
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~g~~i~~~~~v~~i~~~~~~~~v~-~~~g~~ 147 (336)
T 1yvv_A 70 KQWQAQGHVAEWTPLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMR-GDMPVSFSCRITEVFRGEEHWNLL-DAEGQN 147 (336)
T ss_dssp HHHHHHTSEEEECCCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHHH-TTCCEECSCCEEEEEECSSCEEEE-ETTSCE
T ss_pred HHHHhCCCeeeccccceeccCcccccCCCCCccEEcCccHHHHHHHHH-ccCcEEecCEEEEEEEeCCEEEEE-eCCCcC
Confidence 11 112 2889999999999963 456655 466764
Q ss_pred EEEecCeEEEccC
Q 010217 320 SSMPYGMVVWSTG 332 (515)
Q Consensus 320 ~~i~~D~vi~a~G 332 (515)
...+|.||.|+|
T Consensus 148 -~~~a~~vV~a~g 159 (336)
T 1yvv_A 148 -HGPFSHVIIATP 159 (336)
T ss_dssp -EEEESEEEECSC
T ss_pred -ccccCEEEEcCC
Confidence 235999999999
No 280
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.69 E-value=1.3e-05 Score=82.19 Aligned_cols=70 Identities=14% Similarity=0.216 Sum_probs=48.7
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchh-----ccCcccccccccchHHHHhhcCceE
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSV-----TCGTVEARSIVEPVRNIVRKKNVDI 127 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~-----~~g~~~~~~~~~~~~~~~~~~~i~v 127 (515)
.+||+|||||++||+||..|++.|++|+|+|+++..|+....... ..|..........+.+++++.|+..
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~~g~~~ 79 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDTIDGAVLEIGGQWVSPDQTALISLLDELGLKT 79 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCEEEETTEEEECSCCCBCTTCHHHHHHHHHTTCCE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceeccccCCceeccCCeEecCccHHHHHHHHHcCCcc
Confidence 579999999999999999999999999999999988876422111 0111000011234567788888653
No 281
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.67 E-value=0.00017 Score=69.81 Aligned_cols=92 Identities=16% Similarity=0.160 Sum_probs=66.5
Q ss_pred eEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEecccc---cc--------cc----ccHHHHHHHHHHhh
Q 010217 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADH---IL--------NM----FDKRITAFAEEKFS 289 (515)
Q Consensus 225 ~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~---~l--------~~----~~~~~~~~~~~~l~ 289 (515)
.|+|||+||.|+.+|..+++. +.+|+|+++... ++ +. ..+++.........
T Consensus 8 DvvIIG~GpAGl~aA~~l~~~--------------g~~V~liE~~~~gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~ 73 (312)
T 4gcm_A 8 DIAIIGAGPAGMTAAVYASRA--------------NLKTVMIERGIPGGQMANTEEVENFPGFEMITGPDLSTKMFEHAK 73 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--------------TCCEEEEESSCTTGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHC--------------CCCEEEEecCCCCCeeecccccCCcCCccccchHHHHHHHHHHHh
Confidence 799999999999999999885 689999987531 11 11 12456666667777
Q ss_pred cCCeEEEcCcEEEEEeCCeEEEEecCCCceEEEecCeEEEccCC
Q 010217 290 RDGIDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGI 333 (515)
Q Consensus 290 ~~gV~v~~~~~v~~i~~~~v~~~~~~~G~~~~i~~D~vi~a~G~ 333 (515)
+.++.+..+..+............ .++++ +.+|.+|+|||.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~d~liiAtGs 114 (312)
T 4gcm_A 74 KFGAVYQYGDIKSVEDKGEYKVIN-FGNKE--LTAKAVIIATGA 114 (312)
T ss_dssp HTTCEEEECCCCEEEECSSCEEEE-CSSCE--EEEEEEEECCCE
T ss_pred hccccccceeeeeeeeeecceeec-cCCeE--EEeceeEEcccC
Confidence 888888887766666544433333 34554 999999999994
No 282
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=97.66 E-value=0.00019 Score=73.62 Aligned_cols=95 Identities=20% Similarity=0.177 Sum_probs=68.8
Q ss_pred eEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccccc------------------------------
Q 010217 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN------------------------------ 274 (515)
Q Consensus 225 ~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~------------------------------ 274 (515)
.|+|||||+.|+-+|..|++. |.+|+|+++.+....
T Consensus 8 dVvIVGaG~aGl~aA~~La~~--------------G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~ 73 (453)
T 3atr_A 8 DVLIIGGGFAGSSAAYQLSRR--------------GLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENK 73 (453)
T ss_dssp SEEEECCSHHHHHHHHHHSSS--------------SCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEE
T ss_pred CEEEECcCHHHHHHHHHHHHC--------------CCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhh
Confidence 899999999999999999874 577888876543100
Q ss_pred ----------------------ccc-HHHHHHHHHHhhcCCeEEEcCcEEEEEe--CCeEE---EEecCCCceEEEecCe
Q 010217 275 ----------------------MFD-KRITAFAEEKFSRDGIDVKLGSMVVKVT--DKEIF---TKVRGNGETSSMPYGM 326 (515)
Q Consensus 275 ----------------------~~~-~~~~~~~~~~l~~~gV~v~~~~~v~~i~--~~~v~---~~~~~~G~~~~i~~D~ 326 (515)
.++ ..+.+.+.+.+.+.|++++.+++|+++. ++.+. +....+|+..++.+|.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~ 153 (453)
T 3atr_A 74 INGIKLYSPDMQTVWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKV 153 (453)
T ss_dssp EEEEEEECTTSSCEEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSE
T ss_pred hcceEEECCCCceEEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCE
Confidence 001 2455666777778899999999999986 34443 2221167655699999
Q ss_pred EEEccCC
Q 010217 327 VVWSTGI 333 (515)
Q Consensus 327 vi~a~G~ 333 (515)
||.|+|.
T Consensus 154 VV~AdG~ 160 (453)
T 3atr_A 154 VVEATGY 160 (453)
T ss_dssp EEECCGG
T ss_pred EEECcCC
Confidence 9999994
No 283
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=97.66 E-value=0.00018 Score=76.08 Aligned_cols=92 Identities=17% Similarity=0.196 Sum_probs=67.1
Q ss_pred eEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEecccc-cc-----------------------cc-----
Q 010217 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADH-IL-----------------------NM----- 275 (515)
Q Consensus 225 ~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~-~l-----------------------~~----- 275 (515)
.|+|||||+.|+++|..+++. |.+|.|+++... +. ..
T Consensus 30 DVIVIGgG~AGl~AAlaLAr~--------------G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~ 95 (651)
T 3ces_A 30 DVIIIGGGHAGTEAAMAAARM--------------GQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKA 95 (651)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--------------TCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHH
T ss_pred CEEEECChHHHHHHHHHHHhC--------------CCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHH
Confidence 899999999999999999985 688999987631 10 00
Q ss_pred -------------------------cc-HHHHHHHHHHhhc-CCeEEEcCcEEEEEe--CCeEEEEecCCCceEEEecCe
Q 010217 276 -------------------------FD-KRITAFAEEKFSR-DGIDVKLGSMVVKVT--DKEIFTKVRGNGETSSMPYGM 326 (515)
Q Consensus 276 -------------------------~~-~~~~~~~~~~l~~-~gV~v~~~~~v~~i~--~~~v~~~~~~~G~~~~i~~D~ 326 (515)
.+ ..+...+.+.+++ .||+++ ++.|+.+. ++.+..+.+.+|. ++.||.
T Consensus 96 ~d~~gi~f~~l~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~-~~~V~~L~~e~g~V~GV~t~dG~--~I~Ad~ 172 (651)
T 3ces_A 96 IDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIF-QQAVEDLIVENDRVVGAVTQMGL--KFRAKA 172 (651)
T ss_dssp HHHHEEEEEEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEESSSBEEEEEETTSE--EEEEEE
T ss_pred hhhcccchhhhhcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEE-EEEEEEEEecCCEEEEEEECCCC--EEECCE
Confidence 01 1345556677777 699994 57888884 4556555556675 499999
Q ss_pred EEEccCC
Q 010217 327 VVWSTGI 333 (515)
Q Consensus 327 vi~a~G~ 333 (515)
||+|+|.
T Consensus 173 VVLATGt 179 (651)
T 3ces_A 173 VVLTVGT 179 (651)
T ss_dssp EEECCST
T ss_pred EEEcCCC
Confidence 9999994
No 284
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.65 E-value=3.2e-05 Score=80.43 Aligned_cols=41 Identities=22% Similarity=0.250 Sum_probs=37.4
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCC
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTP 97 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~ 97 (515)
..++|+|||||++||+||..|++.|++|+|+|+++..|+..
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~ 52 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKL 52 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCce
Confidence 35899999999999999999999999999999999988754
No 285
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=97.64 E-value=0.00022 Score=68.81 Aligned_cols=92 Identities=12% Similarity=0.164 Sum_probs=60.0
Q ss_pred eEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccc---c---c------c-ccHHHHHHHHHHhhc-
Q 010217 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHI---L---N------M-FDKRITAFAEEKFSR- 290 (515)
Q Consensus 225 ~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~---l---~------~-~~~~~~~~~~~~l~~- 290 (515)
.|+|||+||.|+.+|..+++. +.+|+++++...- . + . .++++.+...+.+.+
T Consensus 8 DVvIIGaGpAGlsAA~~lar~--------------g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (304)
T 4fk1_A 8 DCAVIGAGPAGLNASLVLGRA--------------RKQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKY 73 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--------------TCCEEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTS
T ss_pred CEEEECCCHHHHHHHHHHHHC--------------CCCEEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhc
Confidence 799999999999999998875 6899999875320 0 1 1 124455544444444
Q ss_pred CCeEEEcCcEEEEEeC--CeEEEEecCCCceEEEecCeEEEccCC
Q 010217 291 DGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGI 333 (515)
Q Consensus 291 ~gV~v~~~~~v~~i~~--~~v~~~~~~~G~~~~i~~D~vi~a~G~ 333 (515)
.++.++....+..... +..++. +.+|++ +.+|.||+|||.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~v~-~~~g~~--~~a~~liiATGs 115 (304)
T 4fk1_A 74 PSVHYYEKTVVMITKQSTGLFEIV-TKDHTK--YLAERVLLATGM 115 (304)
T ss_dssp TTEEEEECCEEEEEECTTSCEEEE-ETTCCE--EEEEEEEECCCC
T ss_pred CCEEEEeeEEEEeeecCCCcEEEE-ECCCCE--EEeCEEEEccCC
Confidence 4566665554433322 233444 356764 999999999994
No 286
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.64 E-value=2.6e-05 Score=80.92 Aligned_cols=40 Identities=18% Similarity=0.398 Sum_probs=37.2
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTP 97 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~ 97 (515)
.+||+|||||+|||+||..|++.|++|+|+|+++.+|+..
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~ 78 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRS 78 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcc
Confidence 3799999999999999999999999999999999988764
No 287
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=97.64 E-value=0.00023 Score=75.34 Aligned_cols=96 Identities=22% Similarity=0.347 Sum_probs=69.8
Q ss_pred ceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEecccccc------------------------------
Q 010217 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL------------------------------ 273 (515)
Q Consensus 224 ~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l------------------------------ 273 (515)
.+|+|||||++|+-+|..|++. |.+|+|+++.+...
T Consensus 24 ~DVvIVGgG~AGl~aA~~Lar~--------------G~~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~ 89 (591)
T 3i3l_A 24 SKVAIIGGGPAGSVAGLTLHKL--------------GHDVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYV 89 (591)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--------------TCEEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCE
T ss_pred CCEEEECcCHHHHHHHHHHHcC--------------CCCEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCc
Confidence 4899999999999999999885 67888888762100
Q ss_pred ------------------------------c---cc-cHHHHHHHHHHhhcCCeEEEcCcEEEEEeC--Ce-EEEEecCC
Q 010217 274 ------------------------------N---MF-DKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KE-IFTKVRGN 316 (515)
Q Consensus 274 ------------------------------~---~~-~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~--~~-v~~~~~~~ 316 (515)
+ .+ ...+...+.+.+++.||+++.+++|+++.. +. +.+....+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~ 169 (591)
T 3i3l_A 90 KKPSATFLWGQDQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRG 169 (591)
T ss_dssp EECEEEEECSSSCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEET
T ss_pred ccCCcEEEecCCCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecC
Confidence 0 01 134556677777889999999999999974 22 33332226
Q ss_pred CceEEEecCeEEEccCC
Q 010217 317 GETSSMPYGMVVWSTGI 333 (515)
Q Consensus 317 G~~~~i~~D~vi~a~G~ 333 (515)
|+..++.+|.||.|+|.
T Consensus 170 G~~~~i~AdlVV~AdG~ 186 (591)
T 3i3l_A 170 GESVTVESDFVIDAGGS 186 (591)
T ss_dssp TEEEEEEESEEEECCGG
T ss_pred CceEEEEcCEEEECCCC
Confidence 75556999999999994
No 288
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.60 E-value=0.00048 Score=68.62 Aligned_cols=50 Identities=22% Similarity=0.078 Sum_probs=36.8
Q ss_pred HHHHHHHhhcCCeEEEcCcEEEEEeC--CeEEEEecCCCceEEEecCeEEEccCC
Q 010217 281 TAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGI 333 (515)
Q Consensus 281 ~~~~~~~l~~~gV~v~~~~~v~~i~~--~~v~~~~~~~G~~~~i~~D~vi~a~G~ 333 (515)
...+.+.+++.|++++.+++|+++.. +.+..+.+.+| ++.+|.||+|+|.
T Consensus 152 ~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g---~i~a~~VV~A~G~ 203 (382)
T 1y56_B 152 TTAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKG---IIKTGIVVNATNA 203 (382)
T ss_dssp HHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTE---EEECSEEEECCGG
T ss_pred HHHHHHHHHHCCCEEECCceEEEEEEECCEEEEEEECCc---EEECCEEEECcch
Confidence 34455667778999999999999963 44552333455 3999999999993
No 289
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.59 E-value=3.2e-05 Score=77.01 Aligned_cols=39 Identities=23% Similarity=0.324 Sum_probs=36.2
Q ss_pred CeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCC
Q 010217 59 KKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTP 97 (515)
Q Consensus 59 ~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~ 97 (515)
+||+|||||++|++||..|++.|++|+|+|+++..|+..
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~ 40 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNA 40 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGG
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcce
Confidence 589999999999999999999999999999998888764
No 290
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.59 E-value=0.00014 Score=77.43 Aligned_cols=105 Identities=14% Similarity=0.207 Sum_probs=68.3
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEEE
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~ 136 (515)
..++|+|||||+.|+.+|..|++.|.+|+|+++. .+ ++.. ..++...+.+.+++.|+++. .+..+..
T Consensus 285 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~-----l~~~------d~~~~~~~~~~l~~~gv~i~-~~~~v~~ 351 (598)
T 2x8g_A 285 FPGKTLVIGASYVALECAGFLASLGGDVTVMVRS-IL-----LRGF------DQQMAEKVGDYMENHGVKFA-KLCVPDE 351 (598)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CS-----STTS------CHHHHHHHHHHHHHTTCEEE-ETEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC-cC-----cCcC------CHHHHHHHHHHHHhCCCEEE-ECCeEEE
Confidence 3568999999999999999999999999999976 21 1111 11334445667788898874 3555555
Q ss_pred Eec---------CCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCCC
Q 010217 137 IDA---------ENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (515)
Q Consensus 137 id~---------~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~ 178 (515)
+.. ....+.+... ..++++..+.+|.||+|+|.+|+..
T Consensus 352 v~~~~~~~~~~~~~~~~~v~~~----~~~g~~~~~~~D~vi~a~G~~p~~~ 398 (598)
T 2x8g_A 352 IKQLKVVDTENNKPGLLLVKGH----YTDGKKFEEEFETVIFAVGREPQLS 398 (598)
T ss_dssp EEEEECCBTTTTBCCEEEEEEE----ETTSCEEEEEESEEEECSCEEECGG
T ss_pred EEeccccccccCCCceEEEEEE----eCCCcEEeccCCEEEEEeCCccccC
Confidence 532 1133332210 0022234566999999999988753
No 291
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.59 E-value=3.8e-05 Score=76.25 Aligned_cols=36 Identities=33% Similarity=0.454 Sum_probs=33.1
Q ss_pred CCCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCC
Q 010217 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (515)
Q Consensus 56 ~~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~ 91 (515)
.+.+||+|||||++|+++|++|++.|++|+|+|+..
T Consensus 4 ~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 4 HSQKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 346899999999999999999999999999999875
No 292
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.57 E-value=0.00028 Score=71.20 Aligned_cols=101 Identities=22% Similarity=0.344 Sum_probs=68.7
Q ss_pred eEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcE-EEEEeccccccc-----cc----------------------
Q 010217 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVK-ITLLEAADHILN-----MF---------------------- 276 (515)
Q Consensus 225 ~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~-Vtlv~~~~~~l~-----~~---------------------- 276 (515)
+|+|||||++|+-+|..|.+. |.+ |+|+++.+.+.+ .+
T Consensus 6 dVvIVGaG~aGl~~A~~L~~~--------------G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~ 71 (410)
T 3c96_A 6 DILIAGAGIGGLSCALALHQA--------------GIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAI 71 (410)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--------------TCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSE
T ss_pred eEEEECCCHHHHHHHHHHHhC--------------CCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCC
Confidence 899999999999999999985 577 888887653210 00
Q ss_pred ----------------------------------cHHHHHHHHHHhhc-CC-eEEEcCcEEEEEeC-CeEEEEec--CCC
Q 010217 277 ----------------------------------DKRITAFAEEKFSR-DG-IDVKLGSMVVKVTD-KEIFTKVR--GNG 317 (515)
Q Consensus 277 ----------------------------------~~~~~~~~~~~l~~-~g-V~v~~~~~v~~i~~-~~v~~~~~--~~G 317 (515)
...+.+.+.+.+.+ .| ++++++++|++++. +++.+... .+|
T Consensus 72 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~~~~v~v~~~~~~~g 151 (410)
T 3c96_A 72 PTHELRYIDQSGATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEERDGRVLIGARDGHG 151 (410)
T ss_dssp EECEEEEECTTSCEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEEETTEEEEEEEETTS
T ss_pred CcceEEEEcCCCCEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEecCCccEEEEecCCCC
Confidence 01334455555554 25 68999999999863 44544332 247
Q ss_pred ceEEEecCeEEEccCCCCccchHH
Q 010217 318 ETSSMPYGMVVWSTGIAPHAIIKD 341 (515)
Q Consensus 318 ~~~~i~~D~vi~a~G~~~~p~~~~ 341 (515)
+..++.+|+||.|.|. ...+..
T Consensus 152 ~~~~~~ad~vV~AdG~--~S~vR~ 173 (410)
T 3c96_A 152 KPQALGADVLVGADGI--HSAVRA 173 (410)
T ss_dssp CEEEEEESEEEECCCT--TCHHHH
T ss_pred CceEEecCEEEECCCc--cchhHH
Confidence 5446999999999994 554444
No 293
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.57 E-value=4e-05 Score=79.63 Aligned_cols=42 Identities=26% Similarity=0.246 Sum_probs=38.0
Q ss_pred CCCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCC
Q 010217 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTP 97 (515)
Q Consensus 56 ~~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~ 97 (515)
..+++|+|||||++||+||..|++.|++|+|+|+++..++..
T Consensus 31 ~~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~ 72 (498)
T 2iid_A 31 SNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRV 72 (498)
T ss_dssp SSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCce
Confidence 346799999999999999999999999999999999888754
No 294
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=97.57 E-value=0.00031 Score=69.98 Aligned_cols=61 Identities=21% Similarity=0.224 Sum_probs=42.7
Q ss_pred HHHHHHHHHhhcCCeEEEcCcEEEEEeC--CeEEEEecCCCceEEEecCeEEEccCCCCccchHHHHHHhC
Q 010217 279 RITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVG 347 (515)
Q Consensus 279 ~~~~~~~~~l~~~gV~v~~~~~v~~i~~--~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~~ 347 (515)
.+...+.+.+++.|++++.+++|+++.. +.+.+. +.+| ++.+|.||+|+|.. ...+...++
T Consensus 165 ~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~v~-~~~g---~~~a~~vV~A~G~~----s~~l~~~~~ 227 (382)
T 1ryi_A 165 FVCKAYVKAAKMLGAEIFEHTPVLHVERDGEALFIK-TPSG---DVWANHVVVASGVW----SGMFFKQLG 227 (382)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCCCEEECSSSSEEEE-ETTE---EEEEEEEEECCGGG----THHHHHHTT
T ss_pred HHHHHHHHHHHHCCCEEEcCCcEEEEEEECCEEEEE-cCCc---eEEcCEEEECCChh----HHHHHHhcC
Confidence 4556667777888999999999999964 345333 3445 38999999999942 224555554
No 295
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.54 E-value=5.5e-05 Score=75.74 Aligned_cols=40 Identities=23% Similarity=0.484 Sum_probs=36.8
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTP 97 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~ 97 (515)
.++|+|||||++|+++|..|++.|++|+|+|+++..++..
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~ 42 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNS 42 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCcc
Confidence 3699999999999999999999999999999999888754
No 296
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.52 E-value=4.4e-05 Score=78.78 Aligned_cols=39 Identities=13% Similarity=0.256 Sum_probs=36.1
Q ss_pred CCeEEEECCcHHHHHHHHhccCCC--CeEEEEcCCCCCccC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPS--YDVQVISPRNYFAFT 96 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g--~~V~vie~~~~~~~~ 96 (515)
++||+|||||++|++||++|++.| ++|+|+|+++..++.
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~ 44 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGK 44 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTT
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCce
Confidence 479999999999999999999888 999999999888775
No 297
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=97.52 E-value=0.00054 Score=68.52 Aligned_cols=95 Identities=23% Similarity=0.375 Sum_probs=66.1
Q ss_pred eEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccccc------------------------------
Q 010217 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN------------------------------ 274 (515)
Q Consensus 225 ~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~------------------------------ 274 (515)
.|+|||||++|+-+|..|++. |.+|+|+++.+.+..
T Consensus 6 dVvIvG~G~aGl~~A~~La~~--------------G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~ 71 (397)
T 3cgv_A 6 DVLVVGGGPGGSTAARYAAKY--------------GLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVK 71 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEES
T ss_pred CEEEECcCHHHHHHHHHHHHC--------------CCCEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcc
Confidence 899999999999999999985 567777766542100
Q ss_pred -------------cc--------------cHHHHHHHHHHhhcCCeEEEcCcEEEEEe--CCeEE-EEecCCCceEEEec
Q 010217 275 -------------MF--------------DKRITAFAEEKFSRDGIDVKLGSMVVKVT--DKEIF-TKVRGNGETSSMPY 324 (515)
Q Consensus 275 -------------~~--------------~~~~~~~~~~~l~~~gV~v~~~~~v~~i~--~~~v~-~~~~~~G~~~~i~~ 324 (515)
.+ ...+...+.+.+++.|++++.+++|+++. ++.+. +.....++..++.+
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a 151 (397)
T 3cgv_A 72 GARIYGPSEKRPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRA 151 (397)
T ss_dssp EEEEECTTCSSCEEEC-----CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEE
T ss_pred eEEEEcCCCCEEEEEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEc
Confidence 00 01244566677777899999999999986 34443 22212233346999
Q ss_pred CeEEEccCC
Q 010217 325 GMVVWSTGI 333 (515)
Q Consensus 325 D~vi~a~G~ 333 (515)
|.||.|+|.
T Consensus 152 ~~vV~A~G~ 160 (397)
T 3cgv_A 152 KMVIAADGF 160 (397)
T ss_dssp EEEEECCCT
T ss_pred CEEEECCCc
Confidence 999999994
No 298
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=97.52 E-value=0.00037 Score=68.36 Aligned_cols=39 Identities=13% Similarity=0.221 Sum_probs=30.8
Q ss_pred CCeEEEcCcEEEEEeC--CeEEEEecCCCceEEEecCeEEEccC
Q 010217 291 DGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTG 332 (515)
Q Consensus 291 ~gV~v~~~~~v~~i~~--~~v~~~~~~~G~~~~i~~D~vi~a~G 332 (515)
.|++++++++|++|+. +++.+.. .+|+. +.+|.||+|++
T Consensus 122 ~g~~i~~~~~V~~i~~~~~~~~v~~-~~g~~--~~ad~vV~A~p 162 (342)
T 3qj4_A 122 SGAEVYFRHRVTQINLRDDKWEVSK-QTGSP--EQFDLIVLTMP 162 (342)
T ss_dssp HTCEEESSCCEEEEEECSSSEEEEE-SSSCC--EEESEEEECSC
T ss_pred cCCEEEeCCEEEEEEEcCCEEEEEE-CCCCE--EEcCEEEECCC
Confidence 3899999999999963 4566543 56764 78999999997
No 299
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=97.51 E-value=0.00038 Score=73.07 Aligned_cols=98 Identities=12% Similarity=0.208 Sum_probs=69.8
Q ss_pred ceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEecccccc--------c-------------cc------
Q 010217 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL--------N-------------MF------ 276 (515)
Q Consensus 224 ~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l--------~-------------~~------ 276 (515)
.+|+|||+|++|+.+|..|.+. +.+|+++++.+.+. + .+
T Consensus 17 ~dVvIIGaG~aGl~aA~~L~~~--------------G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~ 82 (542)
T 1w4x_A 17 VDVLVVGAGFSGLYALYRLREL--------------GRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQ 82 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHH
T ss_pred CCEEEECccHHHHHHHHHHHhC--------------CCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhh
Confidence 4899999999999999999985 67999999875421 0 00
Q ss_pred ----------cHHHHHHHHHHhhcCC--eEEEcCcEEEEEeC--C--eEEEEecCCCceEEEecCeEEEccCCCCccc
Q 010217 277 ----------DKRITAFAEEKFSRDG--IDVKLGSMVVKVTD--K--EIFTKVRGNGETSSMPYGMVVWSTGIAPHAI 338 (515)
Q Consensus 277 ----------~~~~~~~~~~~l~~~g--V~v~~~~~v~~i~~--~--~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~ 338 (515)
.+++.+++....++.+ ++++++++|.+++. + ...+. +.+|++ +.+|.||+|+|....|.
T Consensus 83 ~~~~~~~~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~-~~~G~~--~~ad~vV~AtG~~s~p~ 157 (542)
T 1w4x_A 83 EWNWTERYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVD-TNHGDR--IRARYLIMASGQLSVPQ 157 (542)
T ss_dssp HCCCCBSSCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEE-ETTCCE--EEEEEEEECCCSCCCCC
T ss_pred ccCcccccCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEE-ECCCCE--EEeCEEEECcCCCCCCC
Confidence 1345555666566655 67889999999863 2 23433 456764 89999999999644444
No 300
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=97.50 E-value=0.00056 Score=71.98 Aligned_cols=92 Identities=22% Similarity=0.320 Sum_probs=66.7
Q ss_pred eEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEecccc-cc-----------------------cc-----
Q 010217 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADH-IL-----------------------NM----- 275 (515)
Q Consensus 225 ~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~-~l-----------------------~~----- 275 (515)
.|+|||||+.|+++|..+++. |.+|.|+++... +. ..
T Consensus 29 DVIVIGgG~AGl~AAlalAr~--------------G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~ 94 (637)
T 2zxi_A 29 DVVVIGGGHAGIEAALAAARM--------------GAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKA 94 (637)
T ss_dssp SEEEECCSHHHHHHHHHHHHT--------------TCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHC--------------CCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHH
Confidence 799999999999999999985 688999987631 10 00
Q ss_pred -------------------------cc-HHHHHHHHHHhhc-CCeEEEcCcEEEEEe--CCeEEEEecCCCceEEEecCe
Q 010217 276 -------------------------FD-KRITAFAEEKFSR-DGIDVKLGSMVVKVT--DKEIFTKVRGNGETSSMPYGM 326 (515)
Q Consensus 276 -------------------------~~-~~~~~~~~~~l~~-~gV~v~~~~~v~~i~--~~~v~~~~~~~G~~~~i~~D~ 326 (515)
.+ ..+...+.+.+++ .||+++ ++.|+++. ++.+..+.+.+|+. +.||.
T Consensus 95 ~d~~gi~f~~l~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~-~~~Vt~L~~e~g~V~GV~t~dG~~--i~Ada 171 (637)
T 2zxi_A 95 IDQTGIQFKMLNTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIK-QEEVVDIIVKNNQVVGVRTNLGVE--YKTKA 171 (637)
T ss_dssp HHHHEEEEEEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ESCEEEEEESSSBEEEEEETTSCE--EECSE
T ss_pred hhhcccceeecccccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEE-EeEEEEEEecCCEEEEEEECCCcE--EEeCE
Confidence 00 1244556666777 599995 67888875 45565555567764 99999
Q ss_pred EEEccCC
Q 010217 327 VVWSTGI 333 (515)
Q Consensus 327 vi~a~G~ 333 (515)
||+|+|.
T Consensus 172 VVLATG~ 178 (637)
T 2zxi_A 172 VVVTTGT 178 (637)
T ss_dssp EEECCTT
T ss_pred EEEccCC
Confidence 9999994
No 301
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=97.49 E-value=0.00057 Score=71.57 Aligned_cols=55 Identities=13% Similarity=0.304 Sum_probs=39.6
Q ss_pred HHHHHHHHHhhcCCeEEEcCcEEEEEe--CC----eEEEEecCCCceEEEecCeEEEccCC
Q 010217 279 RITAFAEEKFSRDGIDVKLGSMVVKVT--DK----EIFTKVRGNGETSSMPYGMVVWSTGI 333 (515)
Q Consensus 279 ~~~~~~~~~l~~~gV~v~~~~~v~~i~--~~----~v~~~~~~~G~~~~i~~D~vi~a~G~ 333 (515)
.+...+.+.+++.|+++++++++++++ ++ ++++.....+...++.||.||.|.|.
T Consensus 121 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~ 181 (535)
T 3ihg_A 121 KLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAGPDGEYDLRAGYLVGADGN 181 (535)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEETTEEEEEEEEEEEECCCT
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEcCCCeEEEEeCEEEECCCC
Confidence 455666777778899999999999996 34 55544322222346999999999994
No 302
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.48 E-value=7.4e-05 Score=76.70 Aligned_cols=90 Identities=18% Similarity=0.149 Sum_probs=66.5
Q ss_pred cceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEecccccc--------ccc--cHHHHHHHHHHhhcCC
Q 010217 223 ILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL--------NMF--DKRITAFAEEKFSRDG 292 (515)
Q Consensus 223 ~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l--------~~~--~~~~~~~~~~~l~~~g 292 (515)
.++|+|||+|+.|+.+|..|.+.+ ++.+|+++++.+.+. +.+ ...+...+.+.+++.|
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g------------~~~~V~vie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~g 73 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHH------------SRAHVDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQTARSDR 73 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHC------------SSCEEEEECSSSSSCTHHHHTSCTTCGGGGGHHHHHHHHHTSTT
T ss_pred CceEEEECcCHHHHHHHHHHHhcC------------CCCCEEEEeCCCcCCceeecccCCCCccHHHHHHHHHHHHHhCC
Confidence 459999999999999999998862 237999999987664 222 2356667778888999
Q ss_pred eEEEcCcEEEEEeCCeEEEEecCCCceEEEecCeEEEccCCC
Q 010217 293 IDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIA 334 (515)
Q Consensus 293 V~v~~~~~v~~i~~~~v~~~~~~~G~~~~i~~D~vi~a~G~~ 334 (515)
|+++.++.+. ..+.+ .+. ++.+|.||+|||..
T Consensus 74 v~~~~~~~v~----~~V~~---~~~---~~~~d~lVlAtGs~ 105 (460)
T 1cjc_A 74 CAFYGNVEVG----RDVTV---QEL---QDAYHAVVLSYGAE 105 (460)
T ss_dssp EEEEBSCCBT----TTBCH---HHH---HHHSSEEEECCCCC
T ss_pred cEEEeeeEEe----eEEEe---ccc---eEEcCEEEEecCcC
Confidence 9999987662 22221 112 27899999999953
No 303
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.48 E-value=0.00015 Score=75.07 Aligned_cols=94 Identities=23% Similarity=0.366 Sum_probs=67.2
Q ss_pred ceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccccc----------cc---cHHHHHHHHHHhhc
Q 010217 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN----------MF---DKRITAFAEEKFSR 290 (515)
Q Consensus 224 ~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~----------~~---~~~~~~~~~~~l~~ 290 (515)
.+|+|||+|+.|+.+|..|.+ . .+|+|+++.+.+.. .+ ..++...+.+.+ +
T Consensus 109 ~dVvIIGgG~aGl~aA~~L~~--------------~-~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l-~ 172 (493)
T 1y56_A 109 VDVAIIGGGPAGIGAALELQQ--------------Y-LTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKL-N 172 (493)
T ss_dssp ESCCEECCSHHHHHHHHHHTT--------------T-CCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTC-C
T ss_pred CCEEEECccHHHHHHHHHHHh--------------c-CCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHH-h
Confidence 489999999999999999986 3 58999998875411 11 123334444555 6
Q ss_pred CCeEEEcCcEEEEEeCC--eEEEEecCCCceEEEecCeEEEccCC
Q 010217 291 DGIDVKLGSMVVKVTDK--EIFTKVRGNGETSSMPYGMVVWSTGI 333 (515)
Q Consensus 291 ~gV~v~~~~~v~~i~~~--~v~~~~~~~G~~~~i~~D~vi~a~G~ 333 (515)
.||++++++.+.++..+ .+.+....+++..++.+|.+|+|+|.
T Consensus 173 ~~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa 217 (493)
T 1y56_A 173 ENTKIYLETSALGVFDKGEYFLVPVVRGDKLIEILAKRVVLATGA 217 (493)
T ss_dssp TTEEEETTEEECCCEECSSSEEEEEEETTEEEEEEESCEEECCCE
T ss_pred cCCEEEcCCEEEEEEcCCcEEEEEEecCCeEEEEECCEEEECCCC
Confidence 79999999999887643 23333323465446999999999994
No 304
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.47 E-value=4.7e-05 Score=76.14 Aligned_cols=35 Identities=23% Similarity=0.472 Sum_probs=32.2
Q ss_pred CeEEEECCcHHHHHHHHhccCC--CCeEEEEcCCCCC
Q 010217 59 KKVVVLGTGWAGTSFLKNLNNP--SYDVQVISPRNYF 93 (515)
Q Consensus 59 ~~VvIIGgG~AGlsaA~~L~~~--g~~V~vie~~~~~ 93 (515)
++|+|||||+||+++|..|++. |++|+|+|+.+..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 4899999999999999999987 9999999998665
No 305
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.46 E-value=0.00039 Score=74.95 Aligned_cols=101 Identities=18% Similarity=0.187 Sum_probs=65.4
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEE-------------------------------------EcCCCCCccCCcc
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQV-------------------------------------ISPRNYFAFTPLL 99 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~v-------------------------------------ie~~~~~~~~~~~ 99 (515)
..++|+|||||+.|+.+|..|++.|.+|++ +++.+..
T Consensus 493 ~~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~------ 566 (671)
T 1ps9_A 493 VGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKASK------ 566 (671)
T ss_dssp CCSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTCCSGGGBCTTCCCCCCCSSEEEEECSSCSC------
T ss_pred CCCeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhcccccccccccccccccccCCCCcEEEEEEecchh------
Confidence 468999999999999999999988866553 2211100
Q ss_pred chhccCcccccccccchHHHHhhcCceEEEEEeEEEEEecCCCEEEEeeCCccCCCCCceEEeecCEEEEccCCCcCC
Q 010217 100 PSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (515)
Q Consensus 100 ~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~ 177 (515)
....+ .......+...+++.||++ +.+.++..++.+ .+.+.. +++..++.+|.||+|+|..|+.
T Consensus 567 ---l~~~l-~~~~~~~~~~~l~~~GV~v-~~~~~v~~i~~~--~v~~~~-------~G~~~~i~~D~Vi~a~G~~p~~ 630 (671)
T 1ps9_A 567 ---PGQGL-GKTTGWIHRTTLLSRGVKM-IPGVSYQKIDDD--GLHVVI-------NGETQVLAVDNVVICAGQEPNR 630 (671)
T ss_dssp ---TTTTS-CTTTHHHHHHHHHHTTCEE-ECSCEEEEEETT--EEEEEE-------TTEEEEECCSEEEECCCEEECC
T ss_pred ---hcccc-ccccHHHHHHHHHhcCCEE-EeCcEEEEEeCC--eEEEec-------CCeEEEEeCCEEEECCCccccH
Confidence 00000 0112223456678889887 357788888854 455431 2223479999999999998854
No 306
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=97.46 E-value=0.00072 Score=68.02 Aligned_cols=101 Identities=16% Similarity=0.312 Sum_probs=69.2
Q ss_pred ccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccccc---------------------------
Q 010217 222 RILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN--------------------------- 274 (515)
Q Consensus 222 ~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~--------------------------- 274 (515)
+..+|+|||||++|+-+|..|++. |.+|+|+++.+.+.+
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~--------------G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~ 87 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQS--------------GIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETF 87 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT--------------TCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC--------------CCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhh
Confidence 345899999999999999999985 678888887653210
Q ss_pred -------------------cc-----------------cHHHHHHHHHHhhcCCeEEEcCcEEEEEe--CCeEEEEecCC
Q 010217 275 -------------------MF-----------------DKRITAFAEEKFSRDGIDVKLGSMVVKVT--DKEIFTKVRGN 316 (515)
Q Consensus 275 -------------------~~-----------------~~~~~~~~~~~l~~~gV~v~~~~~v~~i~--~~~v~~~~~~~ 316 (515)
.+ ...+.+.+.+.+.+ ++++++++|++++ ++++.+.. .+
T Consensus 88 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~v~v~~-~~ 164 (407)
T 3rp8_A 88 GGPLRRMAYRDFRSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--DSVQFGKRVTRCEEDADGVTVWF-TD 164 (407)
T ss_dssp SCCCCEEEEEETTTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--GGEEESCCEEEEEEETTEEEEEE-TT
T ss_pred cCCCcceEEEECCCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--CEEEECCEEEEEEecCCcEEEEE-cC
Confidence 00 01233444445544 8899999999986 34566554 67
Q ss_pred CceEEEecCeEEEccCCCCccchHHHH
Q 010217 317 GETSSMPYGMVVWSTGIAPHAIIKDFM 343 (515)
Q Consensus 317 G~~~~i~~D~vi~a~G~~~~p~~~~l~ 343 (515)
|++ +.+|+||.|.|. ...+...+
T Consensus 165 g~~--~~a~~vV~AdG~--~S~vr~~l 187 (407)
T 3rp8_A 165 GSS--ASGDLLIAADGS--HSALRPWV 187 (407)
T ss_dssp SCE--EEESEEEECCCT--TCSSHHHH
T ss_pred CCE--EeeCEEEECCCc--ChHHHHHh
Confidence 774 999999999994 44444433
No 307
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.45 E-value=6.4e-05 Score=77.77 Aligned_cols=41 Identities=15% Similarity=0.122 Sum_probs=37.2
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCC-CeEEEEcCCCCCccCC
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPS-YDVQVISPRNYFAFTP 97 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g-~~V~vie~~~~~~~~~ 97 (515)
+.++|+|||||++|++||..|++.| .+|+|+|+++.+|+..
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~ 49 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLS 49 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGG
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCee
Confidence 4689999999999999999999888 7999999999888754
No 308
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=97.44 E-value=0.00047 Score=68.67 Aligned_cols=95 Identities=22% Similarity=0.364 Sum_probs=67.7
Q ss_pred eEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccccc------------------------------
Q 010217 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN------------------------------ 274 (515)
Q Consensus 225 ~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~------------------------------ 274 (515)
.|+|||||++|+-+|..|++. |.+|+|+++.+.+..
T Consensus 6 DViIVGaGpaGl~~A~~La~~--------------G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~ 71 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKY--------------GLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVK 71 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEES
T ss_pred CEEEECcCHHHHHHHHHHHHC--------------CCcEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccc
Confidence 699999999999999999985 677888876543200
Q ss_pred --------------------------ccc-HHHHHHHHHHhhcCCeEEEcCcEEEEEe--CCeEEEE-ecCCCceEEEec
Q 010217 275 --------------------------MFD-KRITAFAEEKFSRDGIDVKLGSMVVKVT--DKEIFTK-VRGNGETSSMPY 324 (515)
Q Consensus 275 --------------------------~~~-~~~~~~~~~~l~~~gV~v~~~~~v~~i~--~~~v~~~-~~~~G~~~~i~~ 324 (515)
.++ ..+...+.+.+.+.|++++.+++++.+. ++.+..+ ...+|+..++.+
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~a 151 (397)
T 3oz2_A 72 GARIYGPSEKRPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRA 151 (397)
T ss_dssp EEEEECTTCSSCEEEECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEE
T ss_pred eEEEEeCCCceEeeccccccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeeccceeeeeeecccccceEEEE
Confidence 000 2344556666777899999999998875 3444332 223566667999
Q ss_pred CeEEEccCC
Q 010217 325 GMVVWSTGI 333 (515)
Q Consensus 325 D~vi~a~G~ 333 (515)
|+||-|.|.
T Consensus 152 ~~vIgAdG~ 160 (397)
T 3oz2_A 152 KMVIAADGF 160 (397)
T ss_dssp EEEEECCCT
T ss_pred eEEEeCCcc
Confidence 999999994
No 309
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=97.44 E-value=0.00053 Score=71.38 Aligned_cols=95 Identities=21% Similarity=0.297 Sum_probs=68.8
Q ss_pred ceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccc--------cc---------------------
Q 010217 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHI--------LN--------------------- 274 (515)
Q Consensus 224 ~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~--------l~--------------------- 274 (515)
.+|+|||||+.|+-+|..|++. |.+|+|+++.+.. .+
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~--------------G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~ 73 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMR--------------GHRVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGF 73 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTT--------------TCCEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTC
T ss_pred CCEEEECcCHHHHHHHHHHHhC--------------CCCEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCC
Confidence 4899999999999999999874 5778888766410 00
Q ss_pred ---------------------------------cc-cHHHHHHHHHHhhcCCeEEEcCcEEEEEeC--CeE---EEEecC
Q 010217 275 ---------------------------------MF-DKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEI---FTKVRG 315 (515)
Q Consensus 275 ---------------------------------~~-~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~--~~v---~~~~~~ 315 (515)
.+ ...+.+.+.+.+++.||+++.+++|+++.. +.+ .+. ..
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~-~~ 152 (512)
T 3e1t_A 74 PIKRGGTFRWGKEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYR-NT 152 (512)
T ss_dssp CEECEEEEECSSCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEE-CS
T ss_pred ccccCceEEecCCccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEE-eC
Confidence 00 123445566777778999999999999863 433 333 35
Q ss_pred CCceEEEecCeEEEccCC
Q 010217 316 NGETSSMPYGMVVWSTGI 333 (515)
Q Consensus 316 ~G~~~~i~~D~vi~a~G~ 333 (515)
+|+..++.+|+||.|+|.
T Consensus 153 dG~~~~i~ad~VI~AdG~ 170 (512)
T 3e1t_A 153 EGVELMAHARFIVDASGN 170 (512)
T ss_dssp SSCEEEEEEEEEEECCCT
T ss_pred CCCEEEEEcCEEEECCCc
Confidence 676556999999999995
No 310
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.42 E-value=7.4e-05 Score=76.61 Aligned_cols=92 Identities=20% Similarity=0.178 Sum_probs=65.3
Q ss_pred ceEEEECCChhHHHHHHHHHH-hhHHHHHhhCcccCCCcEEEEEeccccccc--------c--ccHHHHHHHHHHhhcCC
Q 010217 224 LHFVIVGGGPTGVEFAAELHD-FVDEDLFKLYPKVKDSVKITLLEAADHILN--------M--FDKRITAFAEEKFSRDG 292 (515)
Q Consensus 224 ~~vvVvGgG~~g~E~A~~l~~-~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~--------~--~~~~~~~~~~~~l~~~g 292 (515)
++|+|||+|+.|+.+|..|.+ ... ....+.+|+|+++.+.+.. . ...++...+.+.+++.|
T Consensus 4 ~~VvIIG~G~aGl~aA~~L~~~~~~--------~~~~g~~V~lie~~~~~gg~~~~gv~p~~~~~~~~~~~~~~~~~~~~ 75 (456)
T 1lqt_A 4 YYIAIVGSGPSAFFAAASLLKAADT--------TEDLDMAVDMLEMLPTPWGLVRSGVAPDHPKIKSISKQFEKTAEDPR 75 (456)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHH--------STTCCEEEEEEESSSSCSTHHHHTSCTTCTGGGGGHHHHHHHHTSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhhCcc--------ccCCCCeEEEEecCCCCCCccccccCCCCCCHHHHHHHHHHHHhcCC
Confidence 589999999999999999987 521 0001579999999876532 1 12356667778888899
Q ss_pred eEEEcCcEEEEEeCCeEEEEecCCCceEEEecCeEEEccCC
Q 010217 293 IDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGI 333 (515)
Q Consensus 293 V~v~~~~~v~~i~~~~v~~~~~~~G~~~~i~~D~vi~a~G~ 333 (515)
|+++.++.+ +..+.+ .+++ +.+|.||+|||.
T Consensus 76 v~~~~~v~v----~~~v~~---~~~~---~~~d~lViAtG~ 106 (456)
T 1lqt_A 76 FRFFGNVVV----GEHVQP---GELS---ERYDAVIYAVGA 106 (456)
T ss_dssp EEEEESCCB----TTTBCH---HHHH---HHSSEEEECCCC
T ss_pred CEEEeeEEE----CCEEEE---CCCe---EeCCEEEEeeCC
Confidence 999988653 222222 2232 789999999995
No 311
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.42 E-value=0.0001 Score=79.37 Aligned_cols=41 Identities=24% Similarity=0.413 Sum_probs=38.0
Q ss_pred CCCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccC
Q 010217 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFT 96 (515)
Q Consensus 56 ~~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~ 96 (515)
...++|+|||||++|++||..|.+.|++|+|+|+++..|+.
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~ 145 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGR 145 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTT
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCc
Confidence 45689999999999999999999999999999999888875
No 312
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.39 E-value=0.00011 Score=80.59 Aligned_cols=41 Identities=24% Similarity=0.413 Sum_probs=37.9
Q ss_pred CCCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccC
Q 010217 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFT 96 (515)
Q Consensus 56 ~~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~ 96 (515)
...++|+|||||++||+||..|.+.|++|+|+|+.+..|+.
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG~ 316 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGR 316 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCCc
Confidence 45689999999999999999999999999999999988875
No 313
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.38 E-value=0.00021 Score=80.19 Aligned_cols=98 Identities=13% Similarity=0.117 Sum_probs=70.1
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEEEEE
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v~~i 137 (515)
.++|+|||+|+.|+.+|..|++.|.+|+||++.+.+.. . ...+++.||++ +....+..|
T Consensus 284 gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~~---------------~-----~~~l~~~GV~v-~~~~~v~~i 342 (965)
T 2gag_A 284 GARIAVATTNDSAYELVRELAATGGVVAVIDARSSISA---------------A-----AAQAVADGVQV-ISGSVVVDT 342 (965)
T ss_dssp CSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCCH---------------H-----HHHHHHTTCCE-EETEEEEEE
T ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccch---------------h-----HHHHHhCCeEE-EeCCEeEEE
Confidence 47899999999999999999999999999998865310 0 34567889987 457788888
Q ss_pred ec--CCC--EEEEeeCCccCCCCCceEEeecCEEEEccCCCcCC
Q 010217 138 DA--ENK--KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (515)
Q Consensus 138 d~--~~~--~v~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~ 177 (515)
.. +++ .|.+.+.... ..+++..++.+|.||+|+|..|+.
T Consensus 343 ~~~~~~~v~~v~~~~~~~~-~~~G~~~~i~~D~Vv~a~G~~P~~ 385 (965)
T 2gag_A 343 EADENGELSAIVVAELDEA-RELGGTQRFEADVLAVAGGFNPVV 385 (965)
T ss_dssp EECTTSCEEEEEEEEECTT-CCEEEEEEEECSEEEEECCEEECC
T ss_pred eccCCCCEEEEEEEecccc-CCCCceEEEEcCEEEECCCcCcCh
Confidence 76 333 4555530000 000113489999999999988764
No 314
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.38 E-value=0.00026 Score=76.99 Aligned_cols=107 Identities=16% Similarity=0.230 Sum_probs=70.9
Q ss_pred CCCeEEEEC--CcHHHHHHHHhccCCCCeEEEEcCCCCCccCCccchhccCcccccccccchHHHHhhcCceEEEEEeEE
Q 010217 57 KKKKVVVLG--TGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAEC 134 (515)
Q Consensus 57 ~~~~VvIIG--gG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~v~~~~~~v 134 (515)
..++|+||| ||+.|+.+|..|++.|.+|+|+++.+ +.. .... .. . ...+.+.+++.||++ +...++
T Consensus 527 ~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~-----~~~~---~~-~-~~~~~~~l~~~GV~i-~~~~~v 594 (729)
T 1o94_A 527 IGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LAN-----YMHF---TL-E-YPNMMRRLHELHVEE-LGDHFC 594 (729)
T ss_dssp CCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTH-----HHHH---TT-C-HHHHHHHHHHTTCEE-ECSEEE
T ss_pred CCCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-ccc-----cccc---cc-c-HHHHHHHHHhCCCEE-EcCcEE
Confidence 357999999 99999999999999999999999876 321 0000 00 1 233556677889887 356788
Q ss_pred EEEecCCCEEEEeeC--Cc-c----------CCCCCceEEeecCEEEEccCCCcCC
Q 010217 135 FKIDAENKKVYCRSS--QN-T----------NLNGKEEFCMDYDYLVIAMGARANT 177 (515)
Q Consensus 135 ~~id~~~~~v~~~~~--~~-~----------~~~~~~~~~~~~d~lviAtG~~~~~ 177 (515)
..|+.+. +.+... .+ . ...++.++.+.+|.||+|+|..|+.
T Consensus 595 ~~i~~~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~ 648 (729)
T 1o94_A 595 SRIEPGR--MEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSEC 648 (729)
T ss_dssp EEEETTE--EEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEECC
T ss_pred EEEECCe--EEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCCCCh
Confidence 8888643 333211 00 0 0011223469999999999988754
No 315
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=97.37 E-value=0.001 Score=70.24 Aligned_cols=93 Identities=15% Similarity=0.239 Sum_probs=66.4
Q ss_pred ceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEecccc-cc-----------------------cc----
Q 010217 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADH-IL-----------------------NM---- 275 (515)
Q Consensus 224 ~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~-~l-----------------------~~---- 275 (515)
-.|+|||||+.|+++|..+++. |.+|.|+++... +. ..
T Consensus 22 yDVIVIGgG~AGl~AAlaLAr~--------------G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~ 87 (641)
T 3cp8_A 22 YDVIVVGAGHAGCEAALAVARG--------------GLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGK 87 (641)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--------------TCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHH
T ss_pred CCEEEECccHHHHHHHHHHHHC--------------CCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHH
Confidence 3899999999999999999985 678999987631 10 00
Q ss_pred --------------------------cc-HHHHHHHHHHhhc-CCeEEEcCcEEEEEe--CCeEEEEecCCCceEEEecC
Q 010217 276 --------------------------FD-KRITAFAEEKFSR-DGIDVKLGSMVVKVT--DKEIFTKVRGNGETSSMPYG 325 (515)
Q Consensus 276 --------------------------~~-~~~~~~~~~~l~~-~gV~v~~~~~v~~i~--~~~v~~~~~~~G~~~~i~~D 325 (515)
.+ ..+...+.+.+++ .||+++. ..|+.+. ++.+..+.+.+|+. +.||
T Consensus 88 ~~d~~gi~f~~l~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~-~~V~~L~~d~g~V~GV~t~~G~~--i~Ad 164 (641)
T 3cp8_A 88 AIDATGIQFRMLNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQ-DTVIGVSANSGKFSSVTVRSGRA--IQAK 164 (641)
T ss_dssp HHHHHEEEEEEECSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEE-CCEEEEEEETTEEEEEEETTSCE--EEEE
T ss_pred HHHhcCCchhhcccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEe-eEEEEEEecCCEEEEEEECCCcE--EEeC
Confidence 01 1344556666776 4999965 4788764 45666444567764 9999
Q ss_pred eEEEccCC
Q 010217 326 MVVWSTGI 333 (515)
Q Consensus 326 ~vi~a~G~ 333 (515)
.||+|+|.
T Consensus 165 ~VVLATG~ 172 (641)
T 3cp8_A 165 AAILACGT 172 (641)
T ss_dssp EEEECCTT
T ss_pred EEEECcCC
Confidence 99999994
No 316
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.37 E-value=0.00011 Score=74.83 Aligned_cols=41 Identities=20% Similarity=0.265 Sum_probs=37.8
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccCC
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTP 97 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~~ 97 (515)
..++|+|||+|++|+++|..|++.|++|+|+|+++..|+..
T Consensus 5 ~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~ 45 (433)
T 1d5t_A 5 EEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGES 45 (433)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccc
Confidence 45799999999999999999999999999999999888764
No 317
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=97.36 E-value=6.7e-05 Score=78.23 Aligned_cols=34 Identities=29% Similarity=0.391 Sum_probs=30.7
Q ss_pred CCeEEEECCcHHHHHHHHhccC---CCCeEEEEcCCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNN---PSYDVQVISPRN 91 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~---~g~~V~vie~~~ 91 (515)
.++|||||||++|+++|..|++ .|++|+|||+.+
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~ 38 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGN 38 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC--
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCC
Confidence 5799999999999999999998 999999999875
No 318
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=97.34 E-value=0.0013 Score=65.62 Aligned_cols=51 Identities=18% Similarity=0.105 Sum_probs=38.0
Q ss_pred HHHHHHHHHhhcCCeEEEcCcEEEEEeC--CeEEEEecCCCceEEEecCeEEEccCC
Q 010217 279 RITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGI 333 (515)
Q Consensus 279 ~~~~~~~~~l~~~gV~v~~~~~v~~i~~--~~v~~~~~~~G~~~~i~~D~vi~a~G~ 333 (515)
.+...+.+.+++.|++++.+++|++++. +++.+.. .+| ++.+|.||+|+|.
T Consensus 151 ~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~v~~-~~g---~~~a~~vV~A~G~ 203 (389)
T 2gf3_A 151 NCIRAYRELAEARGAKVLTHTRVEDFDISPDSVKIET-ANG---SYTADKLIVSMGA 203 (389)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECSSCEEEEE-TTE---EEEEEEEEECCGG
T ss_pred HHHHHHHHHHHHCCCEEEcCcEEEEEEecCCeEEEEe-CCC---EEEeCEEEEecCc
Confidence 4445566777788999999999999964 3455443 444 3899999999993
No 319
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=97.32 E-value=0.00097 Score=66.03 Aligned_cols=50 Identities=10% Similarity=0.078 Sum_probs=37.2
Q ss_pred HHHHHHHHhhcCCeEEEcCcEEEEEeC--CeEEEEecCCCceEEEecCeEEEccCC
Q 010217 280 ITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGI 333 (515)
Q Consensus 280 ~~~~~~~~l~~~gV~v~~~~~v~~i~~--~~v~~~~~~~G~~~~i~~D~vi~a~G~ 333 (515)
+...+.+.+++.|++++.+++|+++.. +++.+. +.+|+ +.+|.||+|+|.
T Consensus 151 l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~v~-~~~g~---~~a~~vV~a~G~ 202 (372)
T 2uzz_A 151 AIKTWIQLAKEAGCAQLFNCPVTAIRHDDDGVTIE-TADGE---YQAKKAIVCAGT 202 (372)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEE-ESSCE---EEEEEEEECCGG
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEEEEEcCCEEEEE-ECCCe---EEcCEEEEcCCc
Confidence 344555667788999999999999963 345544 34553 899999999994
No 320
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.30 E-value=7.2e-05 Score=73.79 Aligned_cols=34 Identities=29% Similarity=0.385 Sum_probs=31.2
Q ss_pred CeEEEECCcHHHHHHHHhccCCC------CeEEEEcCCCC
Q 010217 59 KKVVVLGTGWAGTSFLKNLNNPS------YDVQVISPRNY 92 (515)
Q Consensus 59 ~~VvIIGgG~AGlsaA~~L~~~g------~~V~vie~~~~ 92 (515)
+||+|||||++|+++|++|++.| ++|+|+|+...
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~ 40 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFT 40 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCG
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCC
Confidence 58999999999999999999887 99999998863
No 321
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.30 E-value=0.0001 Score=77.09 Aligned_cols=35 Identities=20% Similarity=0.369 Sum_probs=32.1
Q ss_pred CCCeEEEECCcHHHHHHHHhccC------------CCCeEEEEcCCC
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNN------------PSYDVQVISPRN 91 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~------------~g~~V~vie~~~ 91 (515)
..++|||||||+||+++|..|++ .|++|+|||+.+
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~ 52 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPD 52 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCC
Confidence 35799999999999999999998 999999999864
No 322
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=97.30 E-value=0.00085 Score=70.70 Aligned_cols=94 Identities=24% Similarity=0.313 Sum_probs=69.2
Q ss_pred eEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEecccccc-------------------------------
Q 010217 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL------------------------------- 273 (515)
Q Consensus 225 ~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l------------------------------- 273 (515)
.|+|||||++|+-+|..|.+. |.+|+|+++.+...
T Consensus 51 DVvIVGaG~aGL~~A~~La~~--------------G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~ 116 (570)
T 3fmw_A 51 DVVVVGGGPVGLMLAGELRAG--------------GVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQV 116 (570)
T ss_dssp CEEEECCSHHHHHHHHHHHHT--------------TCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCB
T ss_pred CEEEECcCHHHHHHHHHHHHC--------------CCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcc
Confidence 899999999999999999985 67899888653210
Q ss_pred ------c-----c---------------c-cHHHHHHHHHHhhcCCeEEEcCcEEEEEeC--CeEEEEec-CCCceEEEe
Q 010217 274 ------N-----M---------------F-DKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVR-GNGETSSMP 323 (515)
Q Consensus 274 ------~-----~---------------~-~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~--~~v~~~~~-~~G~~~~i~ 323 (515)
. . + ...+...+.+.+++.||+++++++|+.++. +++++... .+|+ .++.
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~-~~~~ 195 (570)
T 3fmw_A 117 AKGLPFAGIFTQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGP-YPVR 195 (570)
T ss_dssp CSBCCBTTBCTTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEE-EEEE
T ss_pred cCCceeCCcccccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCc-EEEE
Confidence 0 0 0 133556667777778999999999999974 34554321 4563 3599
Q ss_pred cCeEEEccCC
Q 010217 324 YGMVVWSTGI 333 (515)
Q Consensus 324 ~D~vi~a~G~ 333 (515)
+|.||.|.|.
T Consensus 196 a~~vV~ADG~ 205 (570)
T 3fmw_A 196 ARYGVGCDGG 205 (570)
T ss_dssp ESEEEECSCS
T ss_pred eCEEEEcCCC
Confidence 9999999994
No 323
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=97.29 E-value=0.00095 Score=66.22 Aligned_cols=59 Identities=14% Similarity=0.071 Sum_probs=40.6
Q ss_pred HHHHHHHhhcCCeEEEcCcEEEEEe--CCeEEEEecCCCceEEEecCeEEEccCCCCccchHHHHHHhC
Q 010217 281 TAFAEEKFSRDGIDVKLGSMVVKVT--DKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVG 347 (515)
Q Consensus 281 ~~~~~~~l~~~gV~v~~~~~v~~i~--~~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~~ 347 (515)
...+.+.+++.|++++++++|+++. ++.+.+. +.+| ++.+|.||+|+|. +...+...++
T Consensus 157 ~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~~~V~-t~~g---~i~a~~VV~A~G~----~s~~l~~~~g 217 (381)
T 3nyc_A 157 HQGYLRGIRRNQGQVLCNHEALEIRRVDGAWEVR-CDAG---SYRAAVLVNAAGA----WCDAIAGLAG 217 (381)
T ss_dssp HHHHHHHHHHTTCEEESSCCCCEEEEETTEEEEE-CSSE---EEEESEEEECCGG----GHHHHHHHHT
T ss_pred HHHHHHHHHHCCCEEEcCCEEEEEEEeCCeEEEE-eCCC---EEEcCEEEECCCh----hHHHHHHHhC
Confidence 3445566677899999999999886 3444433 3455 3999999999993 3335555554
No 324
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.29 E-value=0.00012 Score=71.98 Aligned_cols=33 Identities=27% Similarity=0.350 Sum_probs=31.6
Q ss_pred CeEEEECCcHHHHHHHHhccCCCCeEEEEcCCC
Q 010217 59 KKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (515)
Q Consensus 59 ~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~ 91 (515)
++|+|||||+||+.||..|++.|++|+|||+++
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 689999999999999999999999999999876
No 325
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.28 E-value=0.0014 Score=65.58 Aligned_cols=33 Identities=30% Similarity=0.494 Sum_probs=29.6
Q ss_pred eEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEecccc
Q 010217 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADH 271 (515)
Q Consensus 225 ~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~ 271 (515)
+|+|||||++|+-+|..|.+. |.+|+|+++.+.
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~--------------G~~v~v~Er~~~ 35 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKH--------------GIKVTIYERNSA 35 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--------------TCEEEEECSSCS
T ss_pred EEEEECcCHHHHHHHHHHHhC--------------CCCEEEEecCCC
Confidence 899999999999999999985 689999987654
No 326
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=97.28 E-value=0.0018 Score=67.07 Aligned_cols=97 Identities=24% Similarity=0.284 Sum_probs=68.4
Q ss_pred ccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEecccccc----------------------------
Q 010217 222 RILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL---------------------------- 273 (515)
Q Consensus 222 ~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l---------------------------- 273 (515)
....|+|||+|++|+-+|..|.+. |.+|+|+++.+...
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~--------------G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~ 76 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLG--------------GVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPV 76 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT--------------TCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC--------------CCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhc
Confidence 345899999999999999999985 56666666543210
Q ss_pred ----------------------c---cc-cHHHHHHHHHHhhcCCeEEEcCcEEEEEeC--CeEEEEecCCCc-eEEEec
Q 010217 274 ----------------------N---MF-DKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGE-TSSMPY 324 (515)
Q Consensus 274 ----------------------~---~~-~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~--~~v~~~~~~~G~-~~~i~~ 324 (515)
+ .+ ...+.+.+.+.+++.|+++++++++++++. +++++.. .+|+ ..++.+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~-~~~~g~~~~~a 155 (499)
T 2qa2_A 77 ETSTQGHFGGRPVDFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEV-EGPDGPRSLTT 155 (499)
T ss_dssp CEESEEEETTEEEEGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEE-ECSSCEEEEEE
T ss_pred cccccceecceecccccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEE-EcCCCcEEEEe
Confidence 0 00 134556667777788999999999999963 4555443 2332 235999
Q ss_pred CeEEEccCC
Q 010217 325 GMVVWSTGI 333 (515)
Q Consensus 325 D~vi~a~G~ 333 (515)
|.||.|.|.
T Consensus 156 ~~vVgADG~ 164 (499)
T 2qa2_A 156 RYVVGCDGG 164 (499)
T ss_dssp EEEEECCCT
T ss_pred CEEEEccCc
Confidence 999999994
No 327
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=97.27 E-value=0.0018 Score=67.09 Aligned_cols=96 Identities=22% Similarity=0.282 Sum_probs=67.7
Q ss_pred cceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEecccccc-----------------------------
Q 010217 223 ILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL----------------------------- 273 (515)
Q Consensus 223 ~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l----------------------------- 273 (515)
...|+|||+|++|+-+|..|++. |.+|+|+++.+.+.
T Consensus 11 ~~dVlIVGaGpaGl~~A~~La~~--------------G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~ 76 (500)
T 2qa1_A 11 DAAVIVVGAGPAGMMLAGELRLA--------------GVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVE 76 (500)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHT--------------TCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHC--------------CCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhcc
Confidence 34899999999999999999985 56666666543210
Q ss_pred ---------------------c---cc-cHHHHHHHHHHhhcCCeEEEcCcEEEEEe--CCeEEEEecCCCc-eEEEecC
Q 010217 274 ---------------------N---MF-DKRITAFAEEKFSRDGIDVKLGSMVVKVT--DKEIFTKVRGNGE-TSSMPYG 325 (515)
Q Consensus 274 ---------------------~---~~-~~~~~~~~~~~l~~~gV~v~~~~~v~~i~--~~~v~~~~~~~G~-~~~i~~D 325 (515)
+ .+ ...+.+.+.+.+++.|+++++++++++++ ++++++.. .+++ ..++.+|
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~-~~~~g~~~~~a~ 155 (500)
T 2qa1_A 77 TSTQGHFGGLPIDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEV-RGPEGKHTLRAA 155 (500)
T ss_dssp BCCEEEETTEEEEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEE-EETTEEEEEEES
T ss_pred ccccccccceecccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEE-EcCCCCEEEEeC
Confidence 0 00 13455666777778899999999999996 35555443 2232 2359999
Q ss_pred eEEEccCC
Q 010217 326 MVVWSTGI 333 (515)
Q Consensus 326 ~vi~a~G~ 333 (515)
.||.|.|.
T Consensus 156 ~vVgADG~ 163 (500)
T 2qa1_A 156 YLVGCDGG 163 (500)
T ss_dssp EEEECCCT
T ss_pred EEEECCCc
Confidence 99999994
No 328
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=97.26 E-value=0.0021 Score=66.70 Aligned_cols=61 Identities=16% Similarity=0.167 Sum_probs=41.9
Q ss_pred HHHHHHHHhhcCCeEEEcCcEEEEEeC-Ce---EEEEecCCCceEEEecCeEEEccCCCCccchHHHHH
Q 010217 280 ITAFAEEKFSRDGIDVKLGSMVVKVTD-KE---IFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMK 344 (515)
Q Consensus 280 ~~~~~~~~l~~~gV~v~~~~~v~~i~~-~~---v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~ 344 (515)
+...+.+.+++.|++++.+++|+++.. ++ +.+.+..+|+..++.+|.||.|+| ++...+..
T Consensus 151 l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG----~~s~~l~~ 215 (501)
T 2qcu_A 151 LVLANAQMVVRKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATG----PWVKQFFD 215 (501)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTTCCEEEEEESCEEECCG----GGHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEcCcEEEEEEEeCCEEEEEEEECCCCCEEEEECCEEEECCC----hhHHHHHH
Confidence 444556667788999999999999863 23 333222467655699999999999 33435544
No 329
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.25 E-value=0.00013 Score=82.41 Aligned_cols=90 Identities=18% Similarity=0.289 Sum_probs=67.2
Q ss_pred ccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCc-EEEEEeccccccc---------cccHHHHHHHHHHhhcC
Q 010217 222 RILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSV-KITLLEAADHILN---------MFDKRITAFAEEKFSRD 291 (515)
Q Consensus 222 ~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~-~Vtlv~~~~~~l~---------~~~~~~~~~~~~~l~~~ 291 (515)
.+++|+|||+|+.|+.+|..|++. |. +|+|+++.+.+.. .++.++.++..+.+++.
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~--------------G~~~Vtv~E~~~~~GG~~~~~ip~~~~~~~~~~~~~~~~~~~ 251 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARL--------------GYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKDL 251 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHT--------------TCCCEEEEESSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHTT
T ss_pred CCCEEEEECccHHHHHHHHHHHhc--------------CCCcEEEEeCCCCCCccccccCCcccCCHHHHHHHHHHHHHC
Confidence 467999999999999999999985 56 7999999865431 13455666667888999
Q ss_pred CeEEEcCcEEEEEeCCeEEEEecCCCceEEEecCeEEEccCC
Q 010217 292 GIDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGI 333 (515)
Q Consensus 292 gV~v~~~~~v~~i~~~~v~~~~~~~G~~~~i~~D~vi~a~G~ 333 (515)
||++++++.+.. ..+++ .++. ++.+|.||+|||.
T Consensus 252 gv~~~~~~~v~~---~~v~~---~~~~--~~~~d~vvlAtGa 285 (1025)
T 1gte_A 252 GVKIICGKSLSE---NEITL---NTLK--EEGYKAAFIGIGL 285 (1025)
T ss_dssp TCEEEESCCBST---TSBCH---HHHH--HTTCCEEEECCCC
T ss_pred CcEEEcccEecc---ceEEh---hhcC--ccCCCEEEEecCC
Confidence 999999887631 12222 2233 2789999999995
No 330
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=97.23 E-value=0.002 Score=68.15 Aligned_cols=68 Identities=13% Similarity=0.255 Sum_probs=45.1
Q ss_pred HHHHHHHHHhhcCCeEEEcCcEEEEEeC---CeEEEEecC------CCce-------EEEecCeEEEccCCCCccch-HH
Q 010217 279 RITAFAEEKFSRDGIDVKLGSMVVKVTD---KEIFTKVRG------NGET-------SSMPYGMVVWSTGIAPHAII-KD 341 (515)
Q Consensus 279 ~~~~~~~~~l~~~gV~v~~~~~v~~i~~---~~v~~~~~~------~G~~-------~~i~~D~vi~a~G~~~~p~~-~~ 341 (515)
.+.+.+.+.+++.||++++++.++++.. +.+..+.+. +|+. .++.+|.||.|.|. ...+ +.
T Consensus 145 ~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~--~S~vr~~ 222 (584)
T 2gmh_A 145 HLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGC--HGHLAKQ 222 (584)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCT--TCHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCC--CchHHHH
Confidence 4556677778888999999999999862 234423222 4432 35999999999994 4433 24
Q ss_pred HHHHhCC
Q 010217 342 FMKQVGQ 348 (515)
Q Consensus 342 l~~~~~~ 348 (515)
+...+++
T Consensus 223 l~~~~gl 229 (584)
T 2gmh_A 223 LYKKFDL 229 (584)
T ss_dssp HHHHTTT
T ss_pred HHHHhCC
Confidence 4555555
No 331
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.23 E-value=0.00015 Score=74.09 Aligned_cols=55 Identities=15% Similarity=0.072 Sum_probs=42.8
Q ss_pred HHHHHHHHHHhhcCCeEEEcCcEEEEEeC---CeEEEEecCCCceEEEecCeEEEccCCC
Q 010217 278 KRITAFAEEKFSRDGIDVKLGSMVVKVTD---KEIFTKVRGNGETSSMPYGMVVWSTGIA 334 (515)
Q Consensus 278 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~---~~v~~~~~~~G~~~~i~~D~vi~a~G~~ 334 (515)
.++.+.+.+.+++.|+++++++.|++|.- +.+..+.+.+|+. +.||.||+++++.
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~--i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEI--AYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCE--EEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcE--EECCEEEECCCcc
Confidence 46778888889999999999999999863 4566666667775 9999999999863
No 332
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=97.23 E-value=0.00015 Score=79.08 Aligned_cols=41 Identities=24% Similarity=0.396 Sum_probs=37.1
Q ss_pred CCCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccC
Q 010217 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFT 96 (515)
Q Consensus 56 ~~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~ 96 (515)
...++|+|||||++|+++|..|++.|++|+|+|+++..++.
T Consensus 334 ~~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ggr 374 (776)
T 4gut_A 334 YHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGR 374 (776)
T ss_dssp GTSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceece
Confidence 34689999999999999999999999999999998887764
No 333
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.21 E-value=0.00017 Score=74.25 Aligned_cols=41 Identities=22% Similarity=0.357 Sum_probs=36.3
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCC-eEEEEcCCCCCccCC
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSY-DVQVISPRNYFAFTP 97 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~-~V~vie~~~~~~~~~ 97 (515)
..++|+|||||++|+++|..|.+.|+ +|+|+|+++..++..
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~ 44 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRM 44 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCce
Confidence 35799999999999999999999998 899999998888764
No 334
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=97.21 E-value=0.0031 Score=63.05 Aligned_cols=58 Identities=19% Similarity=0.294 Sum_probs=40.1
Q ss_pred HHHHHHhhcCCeEEEcCcEEEEEe--CCeEEEEecCCCceEEEecCeEEEccCCCCccchHHHHHHhC
Q 010217 282 AFAEEKFSRDGIDVKLGSMVVKVT--DKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVG 347 (515)
Q Consensus 282 ~~~~~~l~~~gV~v~~~~~v~~i~--~~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~~ 347 (515)
..+.+.+++.|++++++++|+++. ++++.+.. .+| ++.+|.||+|+|. +...+...++
T Consensus 157 ~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~t-~~g---~i~a~~VV~A~G~----~s~~l~~~~g 216 (397)
T 2oln_A 157 AALFTLAQAAGATLRAGETVTELVPDADGVSVTT-DRG---TYRAGKVVLACGP----YTNDLLEPLG 216 (397)
T ss_dssp HHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEE-SSC---EEEEEEEEECCGG----GHHHHHGGGT
T ss_pred HHHHHHHHHcCCEEECCCEEEEEEEcCCeEEEEE-CCC---EEEcCEEEEcCCc----ChHHHhhhcC
Confidence 345556677899999999999986 34565543 444 3899999999993 2224555554
No 335
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=97.20 E-value=0.0014 Score=65.74 Aligned_cols=91 Identities=18% Similarity=0.278 Sum_probs=62.4
Q ss_pred ceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccccc-----c--c-c---H--------------
Q 010217 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN-----M--F-D---K-------------- 278 (515)
Q Consensus 224 ~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~-----~--~-~---~-------------- 278 (515)
.+|+|||||++|+.+|..|.+. |.+|+|+++.+.+.. . + + .
T Consensus 27 ~dV~IVGaG~aGl~~A~~L~~~--------------G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~ 92 (398)
T 2xdo_A 27 KNVAIIGGGPVGLTMAKLLQQN--------------GIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYD 92 (398)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT--------------TCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHC--------------CCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHH
Confidence 4899999999999999999874 689999998754211 0 0 0 0
Q ss_pred ------------------------------------HHHHHHHHHhhcCCeEEEcCcEEEEEeC--CeEEEEecCCCceE
Q 010217 279 ------------------------------------RITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGETS 320 (515)
Q Consensus 279 ------------------------------------~~~~~~~~~l~~~gV~v~~~~~v~~i~~--~~v~~~~~~~G~~~ 320 (515)
.+.+.+.+.+. +++++++++|++++. +++.+.. .+|++
T Consensus 93 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v~v~~-~~g~~- 168 (398)
T 2xdo_A 93 LALPMGVNIADEKGNILSTKNVKPENRFDNPEINRNDLRAILLNSLE--NDTVIWDRKLVMLEPGKKKWTLTF-ENKPS- 168 (398)
T ss_dssp HCBCCCEEEECSSSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSC--TTSEEESCCEEEEEECSSSEEEEE-TTSCC-
T ss_pred hhcccceEEECCCCCchhhccccccCCCCCceECHHHHHHHHHhhcC--CCEEEECCEEEEEEECCCEEEEEE-CCCcE-
Confidence 11112222222 357888999999864 3455543 56764
Q ss_pred EEecCeEEEccCC
Q 010217 321 SMPYGMVVWSTGI 333 (515)
Q Consensus 321 ~i~~D~vi~a~G~ 333 (515)
+.+|.||.|.|.
T Consensus 169 -~~ad~vV~AdG~ 180 (398)
T 2xdo_A 169 -ETADLVILANGG 180 (398)
T ss_dssp -EEESEEEECSCT
T ss_pred -EecCEEEECCCc
Confidence 899999999995
No 336
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=97.17 E-value=0.002 Score=69.41 Aligned_cols=48 Identities=13% Similarity=0.133 Sum_probs=35.8
Q ss_pred HHHHHhhcCCeEEEcCcEEEEEe--CCeEEEEecCCCceEEEecCeEEEccCC
Q 010217 283 FAEEKFSRDGIDVKLGSMVVKVT--DKEIFTKVRGNGETSSMPYGMVVWSTGI 333 (515)
Q Consensus 283 ~~~~~l~~~gV~v~~~~~v~~i~--~~~v~~~~~~~G~~~~i~~D~vi~a~G~ 333 (515)
.+.+.+++.|++++++++|+++. ++++.+. +.+|.+ +.+|.||+|+|.
T Consensus 422 aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~-t~~G~~--i~Ad~VVlAtG~ 471 (676)
T 3ps9_A 422 NVLELAQQQGLQIYYQYQLQNFSRKDDCWLLN-FAGDQQ--ATHSVVVLANGH 471 (676)
T ss_dssp HHHHHHHHTTCEEEESCCEEEEEEETTEEEEE-ETTSCE--EEESEEEECCGG
T ss_pred HHHHHHHhCCCEEEeCCeeeEEEEeCCeEEEE-ECCCCE--EECCEEEECCCc
Confidence 34445567899999999999986 3555444 355654 899999999995
No 337
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=97.16 E-value=0.0039 Score=64.76 Aligned_cols=55 Identities=16% Similarity=0.149 Sum_probs=38.4
Q ss_pred HHHHHHHHHhhcCCeEEEcCcEEEEEeC---CeEEEEe-cCCCceEEEecC-eEEEccCC
Q 010217 279 RITAFAEEKFSRDGIDVKLGSMVVKVTD---KEIFTKV-RGNGETSSMPYG-MVVWSTGI 333 (515)
Q Consensus 279 ~~~~~~~~~l~~~gV~v~~~~~v~~i~~---~~v~~~~-~~~G~~~~i~~D-~vi~a~G~ 333 (515)
.+...+.+.+++.||+++++++++++.. +.++.+. ..+|+..++.+| .||+|+|-
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG 262 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGS 262 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCC
Confidence 3445556667788999999999999853 3333221 135665679996 99999994
No 338
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=97.11 E-value=0.0022 Score=67.42 Aligned_cols=63 Identities=14% Similarity=0.014 Sum_probs=43.3
Q ss_pred HHHHHHHhhcCCeEEEcCcEEEEEe--CCe---EEEEecCCCceEEEecCeEEEccCCCCccchHHHHHHhC
Q 010217 281 TAFAEEKFSRDGIDVKLGSMVVKVT--DKE---IFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVG 347 (515)
Q Consensus 281 ~~~~~~~l~~~gV~v~~~~~v~~i~--~~~---v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~~ 347 (515)
...+.+.+++.|++++.+++|+++. +++ +.+.+..+|+..++.+|.||.|+| ++...+.+.++
T Consensus 173 ~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG----~~s~~l~~~~g 240 (561)
T 3da1_A 173 TLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAG----PWVDTLREKDR 240 (561)
T ss_dssp HHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCG----GGHHHHHHTTT
T ss_pred HHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCC----cchHHHHHhcC
Confidence 3344455677899999999999986 344 334333456656799999999999 44445555444
No 339
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=97.08 E-value=0.0016 Score=65.46 Aligned_cols=61 Identities=13% Similarity=0.220 Sum_probs=39.6
Q ss_pred HHHHHHHHhhcCCeEEEcCcEEE---------EEeC--CeEEEEecCCCceEEEecCeEEEccCCCCccchHHHHH-HhC
Q 010217 280 ITAFAEEKFSRDGIDVKLGSMVV---------KVTD--KEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMK-QVG 347 (515)
Q Consensus 280 ~~~~~~~~l~~~gV~v~~~~~v~---------~i~~--~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~-~~~ 347 (515)
+...+.+.+++.|++++.+++|+ ++.. +.+ .+.+.+| ++.+|.||+|+|. +...+.. .++
T Consensus 174 l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v-~v~~~~g---~i~a~~VV~A~G~----~s~~l~~~~~g 245 (405)
T 3c4n_A 174 LALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNTHQ-IVVHETR---QIRAGVIIVAAGA----AGPALVEQGLG 245 (405)
T ss_dssp HHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC--------CBCCE---EEEEEEEEECCGG----GHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeCCeE-EEEECCc---EEECCEEEECCCc----cHHHHHHHhcC
Confidence 44556677778899999999999 7753 334 2333344 3999999999993 2324555 555
Q ss_pred C
Q 010217 348 Q 348 (515)
Q Consensus 348 ~ 348 (515)
+
T Consensus 246 ~ 246 (405)
T 3c4n_A 246 L 246 (405)
T ss_dssp C
T ss_pred C
Confidence 4
No 340
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=97.04 E-value=0.0009 Score=68.41 Aligned_cols=34 Identities=24% Similarity=0.533 Sum_probs=31.7
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCC
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~ 90 (515)
..++|+|+|+|--|.+.|..|...|++|+|||++
T Consensus 2 ~~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d 35 (461)
T 4g65_A 2 NAMKIIILGAGQVGGTLAENLVGENNDITIVDKD 35 (461)
T ss_dssp CCEEEEEECCSHHHHHHHHHTCSTTEEEEEEESC
T ss_pred CcCEEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 3578999999999999999999999999999976
No 341
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=97.01 E-value=0.0035 Score=69.27 Aligned_cols=51 Identities=14% Similarity=0.253 Sum_probs=37.8
Q ss_pred HHHHHHHHhhcCCeEEEcCcEEEEEe--CCeEEEEecCCCceEEEecCeEEEccCC
Q 010217 280 ITAFAEEKFSRDGIDVKLGSMVVKVT--DKEIFTKVRGNGETSSMPYGMVVWSTGI 333 (515)
Q Consensus 280 ~~~~~~~~l~~~gV~v~~~~~v~~i~--~~~v~~~~~~~G~~~~i~~D~vi~a~G~ 333 (515)
+...+.+.+++.|++++.+++|+++. ++.+..+.+.+| ++.||.||+|+|.
T Consensus 153 l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G---~i~Ad~VV~AaG~ 205 (830)
T 1pj5_A 153 AVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADG---VIPADIVVSCAGF 205 (830)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTE---EEECSEEEECCGG
T ss_pred HHHHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEECCc---EEECCEEEECCcc
Confidence 33445566677899999999999996 345544444555 3999999999994
No 342
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.00 E-value=0.002 Score=68.94 Aligned_cols=55 Identities=15% Similarity=0.191 Sum_probs=40.4
Q ss_pred HHHHHHHHHhhcCCe--EEEcCcEEEEEeCC------eEEEEec-----CCCceEEEecCeEEEccCC
Q 010217 279 RITAFAEEKFSRDGI--DVKLGSMVVKVTDK------EIFTKVR-----GNGETSSMPYGMVVWSTGI 333 (515)
Q Consensus 279 ~~~~~~~~~l~~~gV--~v~~~~~v~~i~~~------~v~~~~~-----~~G~~~~i~~D~vi~a~G~ 333 (515)
.+.+.+.+.+++.|+ ++++++++++++.+ .+.+... .+|+..++.+|.||.|.|.
T Consensus 142 ~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~ 209 (639)
T 2dkh_A 142 RVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGA 209 (639)
T ss_dssp HHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCT
T ss_pred HHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCc
Confidence 456667777888876 99999999999632 3554432 2565556999999999994
No 343
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=96.98 E-value=0.00057 Score=68.20 Aligned_cols=85 Identities=21% Similarity=0.422 Sum_probs=62.2
Q ss_pred eEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccc----------------------c-cc------
Q 010217 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHI----------------------L-NM------ 275 (515)
Q Consensus 225 ~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~----------------------l-~~------ 275 (515)
+|+|||||+.|+.+|..|.+.. +|.+|+|+++.+.+ . ..
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~------------~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQAR------------PLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNP 69 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHC------------TTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCC
T ss_pred eEEEECCCHHHHHHHHHHHhcC------------CCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhh
Confidence 7999999999999999998751 14678888765432 0 00
Q ss_pred --------------------------ccHHHHHHHHHHhhcCCeEEEcCcEEEEEeCCeEEEEecCCCceEEEecCeEEE
Q 010217 276 --------------------------FDKRITAFAEEKFSRDGIDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVW 329 (515)
Q Consensus 276 --------------------------~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~v~~~~~~~G~~~~i~~D~vi~ 329 (515)
....+.+.+.+.+++.||+++++++|++++.. + ++.+|.||.
T Consensus 70 ~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~----------~--~~~ad~vV~ 137 (381)
T 3c4a_A 70 QFLEDFKLVHHNEPSLMSTGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL----------P--LADYDLVVL 137 (381)
T ss_dssp EEECCEEEEESSSEEECCCCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC----------C--GGGCSEEEE
T ss_pred ccccceEEEeCCeeEEecCCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc----------c--cccCCEEEE
Confidence 01345666777777789999999988777532 1 267999999
Q ss_pred ccCC
Q 010217 330 STGI 333 (515)
Q Consensus 330 a~G~ 333 (515)
|.|.
T Consensus 138 AdG~ 141 (381)
T 3c4a_A 138 ANGV 141 (381)
T ss_dssp CCGG
T ss_pred CCCC
Confidence 9995
No 344
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=96.94 E-value=0.0071 Score=64.07 Aligned_cols=51 Identities=16% Similarity=0.048 Sum_probs=37.2
Q ss_pred HHHHHHhhcCC-eEEEcCcEEEEEe--CCe---EEEEecCCCceEEEecCeEEEccC
Q 010217 282 AFAEEKFSRDG-IDVKLGSMVVKVT--DKE---IFTKVRGNGETSSMPYGMVVWSTG 332 (515)
Q Consensus 282 ~~~~~~l~~~g-V~v~~~~~v~~i~--~~~---v~~~~~~~G~~~~i~~D~vi~a~G 332 (515)
..+.+.+++.| |+++.++.++++. ++. +......+|+...+.++.||+|+|
T Consensus 138 ~~L~~~~~~~gnv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtG 194 (602)
T 1kf6_A 138 HTLFQTSLQFPQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATG 194 (602)
T ss_dssp HHHHHHHTTCTTEEEEETEEEEEEEEETTEEEEEEEEETTTTEEEEEECSCEEECCC
T ss_pred HHHHHHHHhCCCcEEEeCCEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCC
Confidence 34445556677 9999999999985 343 334444678766799999999999
No 345
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=96.93 E-value=0.0064 Score=58.77 Aligned_cols=70 Identities=14% Similarity=0.153 Sum_probs=50.6
Q ss_pred ceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEecccccccc----------------------------
Q 010217 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM---------------------------- 275 (515)
Q Consensus 224 ~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~~---------------------------- 275 (515)
.+|+|||+|+.|+.+|..|.+.. ++.+|+++++.+.+...
T Consensus 66 ~dv~IiG~G~aGl~aA~~la~~~------------~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~ 133 (326)
T 2gjc_A 66 SDVIIVGAGSSGLSAAYVIAKNR------------PDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPY 133 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHC------------TTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCC
T ss_pred CCEEEECccHHHHHHHHHHHhcC------------CCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCccc
Confidence 38999999999999999998751 25789999886543100
Q ss_pred ----------ccHHHHHHHHHHhhc-CCeEEEcCcEEEEEe
Q 010217 276 ----------FDKRITAFAEEKFSR-DGIDVKLGSMVVKVT 305 (515)
Q Consensus 276 ----------~~~~~~~~~~~~l~~-~gV~v~~~~~v~~i~ 305 (515)
....+...+.+.+.+ .||+++.++.+.++.
T Consensus 134 ~~~g~~~~~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll 174 (326)
T 2gjc_A 134 EDEGDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLV 174 (326)
T ss_dssp EECSSEEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEE
T ss_pred ccCCCeEEEcchHHHHHHHHHHHHHhcCcEEEecceeeeee
Confidence 112334455555666 599999999999985
No 346
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=96.90 E-value=0.0053 Score=64.37 Aligned_cols=51 Identities=12% Similarity=0.181 Sum_probs=34.8
Q ss_pred HHHHHHHHhhcCCeEEEcCcEEEEEeC--CeEEEEe--cCCCceEEEecCeEEEccCC
Q 010217 280 ITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKV--RGNGETSSMPYGMVVWSTGI 333 (515)
Q Consensus 280 ~~~~~~~~l~~~gV~v~~~~~v~~i~~--~~v~~~~--~~~G~~~~i~~D~vi~a~G~ 333 (515)
+.+.+.+.+++. +++++++++++. +++++.. ..+|+..++.+|.||.|.|.
T Consensus 140 l~~~L~~~a~~~---v~~~~~v~~~~~~~~~v~v~~~~~~~G~~~~i~a~~vVgADG~ 194 (549)
T 2r0c_A 140 LAPLLAEAVGER---LRTRSRLDSFEQRDDHVRATITDLRTGATRAVHARYLVACDGA 194 (549)
T ss_dssp HHHHHHHHHGGG---EECSEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEEEECCCT
T ss_pred HHHHHHHHHHHh---cccCcEEEEEEEeCCEEEEEEEECCCCCEEEEEeCEEEECCCC
Confidence 444555556555 888999999863 4454432 23475456999999999994
No 347
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=96.89 E-value=0.0038 Score=67.39 Aligned_cols=48 Identities=10% Similarity=0.142 Sum_probs=34.6
Q ss_pred HHHHhhcCCeEEEcCcEEEEEeC--CeEEEEecCCCc-eEEEecCeEEEccCCC
Q 010217 284 AEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGE-TSSMPYGMVVWSTGIA 334 (515)
Q Consensus 284 ~~~~l~~~gV~v~~~~~v~~i~~--~~v~~~~~~~G~-~~~i~~D~vi~a~G~~ 334 (515)
+.+.+++.|++++++++|+++.. +++.+.. .+|+ . +.+|.||+|+|..
T Consensus 418 L~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t-~~G~~~--i~Ad~VVlAtG~~ 468 (689)
T 3pvc_A 418 LMMLAQQNGMTCHYQHELQRLKRIDSQWQLTF-GQSQAA--KHHATVILATGHR 468 (689)
T ss_dssp HHHHHHHTTCEEEESCCEEEEEECSSSEEEEE-C-CCCC--EEESEEEECCGGG
T ss_pred HHHHHHhCCCEEEeCCeEeEEEEeCCeEEEEe-CCCcEE--EECCEEEECCCcc
Confidence 33445567999999999999963 4454443 4564 4 8999999999953
No 348
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=96.88 E-value=0.01 Score=57.68 Aligned_cols=138 Identities=16% Similarity=0.125 Sum_probs=83.6
Q ss_pred ceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccccc-----------------------------
Q 010217 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN----------------------------- 274 (515)
Q Consensus 224 ~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~----------------------------- 274 (515)
-.|+|||+|+.|+.+|..|++.. ++.+|+|+++.+.+..
T Consensus 80 ~DVvIVGgG~AGL~aA~~La~~~------------~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~ 147 (344)
T 3jsk_A 80 TDIVIVGAGSCGLSAAYVLSTLR------------PDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPY 147 (344)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHC------------TTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCC
T ss_pred CCEEEECccHHHHHHHHHHHhcC------------CCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCcc
Confidence 38999999999999999998741 2578999988753210
Q ss_pred ---------cccHHHHHHHHHHhhc-CCeEEEcCcEEEEEe--C-----------------C--eEEEEec------CCC
Q 010217 275 ---------MFDKRITAFAEEKFSR-DGIDVKLGSMVVKVT--D-----------------K--EIFTKVR------GNG 317 (515)
Q Consensus 275 ---------~~~~~~~~~~~~~l~~-~gV~v~~~~~v~~i~--~-----------------~--~v~~~~~------~~G 317 (515)
....++.+.+.+.+.+ .||+++.++.+.++. + + .+..+.. .+|
T Consensus 148 ~~~G~~~~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g 227 (344)
T 3jsk_A 148 EDEGDYVVVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHH 227 (344)
T ss_dssp EECSSEEEESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTS
T ss_pred cccCCeEEEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccC
Confidence 0012334555566666 699999999998874 2 1 2222111 122
Q ss_pred ------ceEEEecCeEEEccCCCCccchHHH---HHHhCCC--CCC--cee--------eCCCccccCCCCEEEeccccc
Q 010217 318 ------ETSSMPYGMVVWSTGIAPHAIIKDF---MKQVGQT--NRR--ALA--------TDEWLRVEGSDSIYALGDCAT 376 (515)
Q Consensus 318 ------~~~~i~~D~vi~a~G~~~~p~~~~l---~~~~~~~--~~g--~i~--------vd~~l~t~~~~~IyA~GD~~~ 376 (515)
+..++.++.||.|||.. .+....+ +..+++. -.| ... |+..-++ +|++|++|=.+.
T Consensus 228 ~~~~~~d~~~i~Ak~VV~ATG~~-s~v~~~~~~~l~~~~~~~~~~g~~~~~~~~~e~~~v~~t~~v--~~gl~~~gm~~~ 304 (344)
T 3jsk_A 228 DDQSAMDPNTINAPVIISTTGHD-GPFGAFSVKRLVSMKQMERLNGMRGLDMQSAEDAIVNNTREI--VPGLIVGGMELS 304 (344)
T ss_dssp SSSSCCBCEEEECSEEEECCCSS-SSSSCHHHHHHHHTTSSSCCCCCEEECHHHHHHHHHHTCEEE--ETTEEECGGGHH
T ss_pred CcccccCceEEEcCEEEECCCCC-chhhHHHHHHHhhcCcccccCCCcccccccchhhhcccCceE--cCCEEEechhhH
Confidence 33469999999999952 2322122 3445542 122 121 2222232 799999995543
No 349
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=96.87 E-value=0.0058 Score=61.97 Aligned_cols=53 Identities=17% Similarity=0.240 Sum_probs=40.8
Q ss_pred HHHHHHHHHhhcCCeEEEcCc---EEEEEe--CCeEEEEecCCCceEEEecCeEEEccCC
Q 010217 279 RITAFAEEKFSRDGIDVKLGS---MVVKVT--DKEIFTKVRGNGETSSMPYGMVVWSTGI 333 (515)
Q Consensus 279 ~~~~~~~~~l~~~gV~v~~~~---~v~~i~--~~~v~~~~~~~G~~~~i~~D~vi~a~G~ 333 (515)
.+...+.+.+++.||+|++++ +|+++. ++.+..+.+.+|++ +.+|.||+|+|.
T Consensus 162 ~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~--i~Ad~VV~AtG~ 219 (438)
T 3dje_A 162 NALVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKI--WRAERTFLCAGA 219 (438)
T ss_dssp HHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEE--EECSEEEECCGG
T ss_pred HHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCE--EECCEEEECCCC
Confidence 445556667778899999999 999985 45666455567754 999999999994
No 350
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=96.83 E-value=0.00034 Score=74.87 Aligned_cols=36 Identities=25% Similarity=0.432 Sum_probs=33.5
Q ss_pred CCeEEEECCcHHHHHHHHhccCCC--------CeEEEEcCCC-CC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPS--------YDVQVISPRN-YF 93 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g--------~~V~vie~~~-~~ 93 (515)
.++|+|||||++||+||+.|.+.| ++|+|+|+++ .+
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 579999999999999999999877 9999999998 77
No 351
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.77 E-value=0.004 Score=64.49 Aligned_cols=114 Identities=24% Similarity=0.268 Sum_probs=71.2
Q ss_pred ceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccc-------cc----------------------
Q 010217 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHI-------LN---------------------- 274 (515)
Q Consensus 224 ~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~-------l~---------------------- 274 (515)
-.|+|||+||+|+-+|..|.+.+...+.........+....++++.+.+ ++
T Consensus 40 ~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlvtl~~P~s~~ 119 (501)
T 4b63_A 40 HDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLATLRDPRSSF 119 (501)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSSTTTCTTCTT
T ss_pred CcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhccccCCCCcc
Confidence 3799999999999999999875421111000111122344555554321 00
Q ss_pred --------------------cc--cHHHHHHHHHHhhcCCeEEEcCcEEEEEeC---C---------eEEEEecCCCceE
Q 010217 275 --------------------MF--DKRITAFAEEKFSRDGIDVKLGSMVVKVTD---K---------EIFTKVRGNGETS 320 (515)
Q Consensus 275 --------------------~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~---~---------~v~~~~~~~G~~~ 320 (515)
.+ -.++.++++...++.+..++++++|++++. + .|+..+..+|+..
T Consensus 120 sf~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~ 199 (501)
T 4b63_A 120 TFLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEIS 199 (501)
T ss_dssp SHHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEE
T ss_pred chHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEE
Confidence 00 135667777777777778999999999962 1 1344444567777
Q ss_pred EEecCeEEEccCCCCccch
Q 010217 321 SMPYGMVVWSTGIAPHAII 339 (515)
Q Consensus 321 ~i~~D~vi~a~G~~~~p~~ 339 (515)
++.|+.||+|+| ..|.+
T Consensus 200 ~~~ar~vVlatG--~~P~i 216 (501)
T 4b63_A 200 ARRTRKVVIAIG--GTAKM 216 (501)
T ss_dssp EEEEEEEEECCC--CEECC
T ss_pred EEEeCEEEECcC--CCCCC
Confidence 799999999999 46655
No 352
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=96.75 E-value=0.0087 Score=62.53 Aligned_cols=49 Identities=16% Similarity=0.261 Sum_probs=35.5
Q ss_pred HHHHHHhhcCCeEEEcCcEEEEEeC--Ce-EEEEecCCCceEEEecCeEEEccCC
Q 010217 282 AFAEEKFSRDGIDVKLGSMVVKVTD--KE-IFTKVRGNGETSSMPYGMVVWSTGI 333 (515)
Q Consensus 282 ~~~~~~l~~~gV~v~~~~~v~~i~~--~~-v~~~~~~~G~~~~i~~D~vi~a~G~ 333 (515)
..+.+.+++.||+++.+ +|+++.. ++ +..+.+.+|+ ++.+|.||.|+|.
T Consensus 169 ~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~--~i~ad~vV~A~G~ 220 (538)
T 2aqj_A 169 DFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGR--TLEADLFIDCSGM 220 (538)
T ss_dssp HHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSC--EECCSEEEECCGG
T ss_pred HHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCc--EEEeCEEEECCCC
Confidence 44556666789999999 7998863 32 3333445675 3999999999995
No 353
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=96.61 E-value=0.00092 Score=70.15 Aligned_cols=36 Identities=14% Similarity=0.210 Sum_probs=33.3
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCC
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNY 92 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~ 92 (515)
..+|+||||+|++|+.+|.+|++.|++|+|+|+...
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~ 41 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGP 41 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 458999999999999999999999999999998864
No 354
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=96.60 E-value=0.01 Score=60.91 Aligned_cols=49 Identities=18% Similarity=0.152 Sum_probs=33.2
Q ss_pred HHHHHHHhhcCCeEEEcCcEEEEEe--CCeEEEEec--CCCceEEEecCeEEEccCC
Q 010217 281 TAFAEEKFSRDGIDVKLGSMVVKVT--DKEIFTKVR--GNGETSSMPYGMVVWSTGI 333 (515)
Q Consensus 281 ~~~~~~~l~~~gV~v~~~~~v~~i~--~~~v~~~~~--~~G~~~~i~~D~vi~a~G~ 333 (515)
...+.+.+++.||+++.++.+ ++. ++.+..+.. .+| ++.+|.||+|+|.
T Consensus 122 ~~~L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g---~~~a~~VVlAtGg 174 (472)
T 2e5v_A 122 FNFLLKLAREEGIPIIEDRLV-EIRVKDGKVTGFVTEKRGL---VEDVDKLVLATGG 174 (472)
T ss_dssp HHHHHHHHHHTTCCEECCCEE-EEEEETTEEEEEEETTTEE---ECCCSEEEECCCC
T ss_pred HHHHHHHHHhCCCEEEECcEE-EEEEeCCEEEEEEEEeCCC---eEEeeeEEECCCC
Confidence 344555566789999999999 884 344432221 223 3779999999994
No 355
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=96.56 E-value=0.015 Score=61.13 Aligned_cols=58 Identities=14% Similarity=0.101 Sum_probs=39.2
Q ss_pred HHHHhhcCCeEEEcCcEEEEEe--CCeE---EEEecCCCceEEEecCeEEEccCCCCccchHHHHHH
Q 010217 284 AEEKFSRDGIDVKLGSMVVKVT--DKEI---FTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQ 345 (515)
Q Consensus 284 ~~~~l~~~gV~v~~~~~v~~i~--~~~v---~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~ 345 (515)
+.+.+.+.|++++.+++|+++. ++.+ .+.+..+|+..++.+|.||.|+| +++..+...
T Consensus 194 l~~~a~~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG----~ws~~l~~~ 256 (571)
T 2rgh_A 194 NIKKAAEDGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSG----PWVDKVRNL 256 (571)
T ss_dssp HHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCG----GGHHHHHTT
T ss_pred HHHHHHHcCCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCC----hhHHHHHHh
Confidence 3445567899999999999986 3443 33332256544699999999999 444455443
No 356
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=96.46 E-value=0.0016 Score=67.92 Aligned_cols=35 Identities=26% Similarity=0.428 Sum_probs=32.2
Q ss_pred CCeEEEECCcHHHHHHHHhccC-CCCeEEEEcCCCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNN-PSYDVQVISPRNY 92 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~-~g~~V~vie~~~~ 92 (515)
.+|+||||||+||..+|.+|++ .+++|+|+|+.+.
T Consensus 17 ~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 17 NCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 6899999999999999999996 7899999998864
No 357
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=96.38 E-value=0.027 Score=59.36 Aligned_cols=50 Identities=10% Similarity=0.026 Sum_probs=36.1
Q ss_pred HHHHhhcCCeEEEcCcEEEEEeC---CeE---EEEecCCCceEEEecCeEEEccCC
Q 010217 284 AEEKFSRDGIDVKLGSMVVKVTD---KEI---FTKVRGNGETSSMPYGMVVWSTGI 333 (515)
Q Consensus 284 ~~~~l~~~gV~v~~~~~v~~i~~---~~v---~~~~~~~G~~~~i~~D~vi~a~G~ 333 (515)
+.+.+++.||+++.++.++++.. +.+ .+.+..+|+...+.++.||+|+|-
T Consensus 149 L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg 204 (588)
T 2wdq_A 149 LYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGG 204 (588)
T ss_dssp HHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCC
Confidence 44445567999999999999852 333 333335677667999999999993
No 358
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=96.29 E-value=0.0028 Score=66.65 Aligned_cols=36 Identities=19% Similarity=0.258 Sum_probs=32.6
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCC-CeEEEEcCCCC
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPS-YDVQVISPRNY 92 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g-~~V~vie~~~~ 92 (515)
..+|+||||||.||+.+|.+|++.+ .+|+|||+.+.
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 4589999999999999999999776 79999999865
No 359
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=96.26 E-value=0.026 Score=59.07 Aligned_cols=52 Identities=15% Similarity=0.168 Sum_probs=37.5
Q ss_pred HHHHHHHHHhhcC-CeEEEcCcEEEEEeC--Ce-EEEEecCCCceEEEecCeEEEccCC
Q 010217 279 RITAFAEEKFSRD-GIDVKLGSMVVKVTD--KE-IFTKVRGNGETSSMPYGMVVWSTGI 333 (515)
Q Consensus 279 ~~~~~~~~~l~~~-gV~v~~~~~v~~i~~--~~-v~~~~~~~G~~~~i~~D~vi~a~G~ 333 (515)
.+.+.+.+.+++. ||+++.+ +|+++.. ++ +..+.+.+|++ +.+|.||.|+|.
T Consensus 195 ~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~--i~ad~vI~A~G~ 250 (550)
T 2e4g_A 195 LVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRV--FDADLFVDCSGF 250 (550)
T ss_dssp HHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCE--EECSEEEECCGG
T ss_pred HHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCE--EECCEEEECCCC
Confidence 3455566666777 9999999 8999863 33 33344456764 999999999995
No 360
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=96.25 E-value=0.0023 Score=66.88 Aligned_cols=36 Identities=22% Similarity=0.365 Sum_probs=32.9
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCC
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYF 93 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~ 93 (515)
..+|+||||||+||+.+|.+|++ |.+|+|+|+.+..
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~ 60 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCG
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCc
Confidence 35899999999999999999999 9999999998654
No 361
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=96.08 E-value=0.037 Score=58.66 Aligned_cols=50 Identities=12% Similarity=0.031 Sum_probs=35.8
Q ss_pred HHHHhhcCCeEEEcCcEEEEEe--CCeE---EEEecCCCceEEEecCeEEEccCC
Q 010217 284 AEEKFSRDGIDVKLGSMVVKVT--DKEI---FTKVRGNGETSSMPYGMVVWSTGI 333 (515)
Q Consensus 284 ~~~~l~~~gV~v~~~~~v~~i~--~~~v---~~~~~~~G~~~~i~~D~vi~a~G~ 333 (515)
+.+.+.+.||+++.++.+.++. ++.+ .+.+..+|+...+.++.||+|+|-
T Consensus 161 L~~~~~~~gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG 215 (621)
T 2h88_A 161 LYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGG 215 (621)
T ss_dssp HHHHHTTSCCEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHHHHhCCCEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCc
Confidence 3344456789999999999985 3433 333335787667999999999983
No 362
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=96.05 E-value=0.028 Score=60.27 Aligned_cols=21 Identities=38% Similarity=0.645 Sum_probs=19.7
Q ss_pred ceEEEECCChhHHHHHHHHHH
Q 010217 224 LHFVIVGGGPTGVEFAAELHD 244 (515)
Q Consensus 224 ~~vvVvGgG~~g~E~A~~l~~ 244 (515)
..|+|||||++|+-+|..|++
T Consensus 9 ~dVlIVGaGpaGL~lA~~La~ 29 (665)
T 1pn0_A 9 CDVLIVGAGPAGLMAARVLSE 29 (665)
T ss_dssp EEEEEECCSHHHHHHHHHHHH
T ss_pred CcEEEECcCHHHHHHHHHHhc
Confidence 379999999999999999998
No 363
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=95.99 E-value=0.032 Score=58.01 Aligned_cols=50 Identities=12% Similarity=0.150 Sum_probs=35.0
Q ss_pred HHHHHHHhhc-CCeEEEcCcEEEEEeC--Ce-EEEEecCCCceEEEecCeEEEccCC
Q 010217 281 TAFAEEKFSR-DGIDVKLGSMVVKVTD--KE-IFTKVRGNGETSSMPYGMVVWSTGI 333 (515)
Q Consensus 281 ~~~~~~~l~~-~gV~v~~~~~v~~i~~--~~-v~~~~~~~G~~~~i~~D~vi~a~G~ 333 (515)
.+.+.+.+++ .||+++.+ +|+++.. ++ +..+.+.+|++ +.+|.||.|+|.
T Consensus 178 ~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~--i~ad~vV~AdG~ 231 (526)
T 2pyx_A 178 SQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGE--ISGQLFIDCTGA 231 (526)
T ss_dssp HHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCE--EECSEEEECSGG
T ss_pred HHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCE--EEcCEEEECCCc
Confidence 3445556666 89999999 5998863 33 33333456664 999999999995
No 364
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=95.96 E-value=0.0045 Score=65.05 Aligned_cols=35 Identities=23% Similarity=0.422 Sum_probs=32.2
Q ss_pred CCCeEEEECCcHHHHHHHHhccC-CCCeEEEEcCCC
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNN-PSYDVQVISPRN 91 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~-~g~~V~vie~~~ 91 (515)
..+|+||||||.||+.+|.+|.+ .+.+|+|+|+.+
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 46899999999999999999995 689999999987
No 365
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=95.95 E-value=0.0044 Score=64.23 Aligned_cols=38 Identities=16% Similarity=0.325 Sum_probs=34.2
Q ss_pred CCCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCC
Q 010217 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYF 93 (515)
Q Consensus 56 ~~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~ 93 (515)
...+|++|||+|++|+.+|..|.+.|.+|+|+|+....
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~ 46 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRSW 46 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 34689999999999999999999999999999988653
No 366
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=95.92 E-value=0.047 Score=58.25 Aligned_cols=49 Identities=10% Similarity=0.095 Sum_probs=35.4
Q ss_pred HHHhhcCCeEEEcCcEEEEEe--CCe---EEEEecCCCceEEEecCeEEEccCC
Q 010217 285 EEKFSRDGIDVKLGSMVVKVT--DKE---IFTKVRGNGETSSMPYGMVVWSTGI 333 (515)
Q Consensus 285 ~~~l~~~gV~v~~~~~v~~i~--~~~---v~~~~~~~G~~~~i~~D~vi~a~G~ 333 (515)
.+.+.+.||+++.++.+.++. ++. +...+..+|+...+.++.||+|+|-
T Consensus 165 ~~~a~~~gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG 218 (660)
T 2bs2_A 165 ANECLKLGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGG 218 (660)
T ss_dssp HHHHHHHTCEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCC
T ss_pred HHHHHhCCCEEEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCc
Confidence 334455689999999999984 343 3344445787667999999999983
No 367
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=95.87 E-value=0.0039 Score=64.64 Aligned_cols=37 Identities=16% Similarity=0.266 Sum_probs=33.9
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCc
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFA 94 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~ 94 (515)
.+|++|||+|++|+.+|..|++.|.+|+|||+...+.
T Consensus 5 ~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 5 YVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWN 41 (504)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 5799999999999999999999999999999987544
No 368
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=95.85 E-value=0.021 Score=59.67 Aligned_cols=42 Identities=19% Similarity=0.124 Sum_probs=31.7
Q ss_pred CCeEEEcCcEEEEEeC---C------eEE---EEecCCCceEEEecCeEEEccC
Q 010217 291 DGIDVKLGSMVVKVTD---K------EIF---TKVRGNGETSSMPYGMVVWSTG 332 (515)
Q Consensus 291 ~gV~v~~~~~v~~i~~---~------~v~---~~~~~~G~~~~i~~D~vi~a~G 332 (515)
.||+++.++.++++.. + .+. +.+..+|+...+.++.||+|+|
T Consensus 152 ~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtG 205 (540)
T 1chu_A 152 PNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATG 205 (540)
T ss_dssp TTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCC
T ss_pred CCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCC
Confidence 6999999999999852 3 333 3332467766799999999998
No 369
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=95.81 E-value=0.0053 Score=64.86 Aligned_cols=37 Identities=27% Similarity=0.408 Sum_probs=33.6
Q ss_pred CCCeEEEECCcHHHHHHHHhccC-CCCeEEEEcCCCCC
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNN-PSYDVQVISPRNYF 93 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~-~g~~V~vie~~~~~ 93 (515)
..+|++|||+|++|+.+|..|++ .|.+|+|+|+....
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 46899999999999999999998 89999999998654
No 370
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=95.74 E-value=0.05 Score=56.27 Aligned_cols=52 Identities=15% Similarity=0.133 Sum_probs=37.6
Q ss_pred HHHHHHHHHhhcCCeEEEcCcEEEEEeC--Ce-EEEEecCCCceEEEecCeEEEccCC
Q 010217 279 RITAFAEEKFSRDGIDVKLGSMVVKVTD--KE-IFTKVRGNGETSSMPYGMVVWSTGI 333 (515)
Q Consensus 279 ~~~~~~~~~l~~~gV~v~~~~~v~~i~~--~~-v~~~~~~~G~~~~i~~D~vi~a~G~ 333 (515)
.+...+.+.+++.||+++.+ +|+++.. ++ +..+.+.+|+ ++.+|.||.|+|.
T Consensus 174 ~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~--~~~ad~vV~A~G~ 228 (511)
T 2weu_A 174 EVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHG--EISGDLFVDCTGF 228 (511)
T ss_dssp HHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSC--EEECSEEEECCGG
T ss_pred HHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCC--EEEcCEEEECCCc
Confidence 34555666677789999999 8998863 33 3333345676 3999999999995
No 371
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=95.69 E-value=0.0044 Score=64.97 Aligned_cols=36 Identities=28% Similarity=0.321 Sum_probs=32.8
Q ss_pred CCeEEEECCcHHHHHHHHhccC-CCCeEEEEcCCCCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNN-PSYDVQVISPRNYF 93 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~-~g~~V~vie~~~~~ 93 (515)
.+|+||||||.||+.+|.+|++ .+.+|+|+|+.+..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 3799999999999999999997 79999999998654
No 372
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=95.65 E-value=0.0078 Score=62.96 Aligned_cols=37 Identities=19% Similarity=0.286 Sum_probs=33.4
Q ss_pred CCCeEEEECCcHHHHHHHHhccCC-CCeEEEEcCCCCC
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNP-SYDVQVISPRNYF 93 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~-g~~V~vie~~~~~ 93 (515)
+.+|++|||+|++|+.+|..|++. +.+|+|+|+....
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDD 49 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 468999999999999999999986 8999999998654
No 373
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.62 E-value=0.0095 Score=49.97 Aligned_cols=35 Identities=17% Similarity=0.208 Sum_probs=32.4
Q ss_pred CCCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCC
Q 010217 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (515)
Q Consensus 56 ~~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~ 90 (515)
..+.+|+|||.|.-|...|..|...|++|+++|++
T Consensus 5 ~~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~ 39 (140)
T 3fwz_A 5 DICNHALLVGYGRVGSLLGEKLLASDIPLVVIETS 39 (140)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECC
Confidence 45679999999999999999999999999999986
No 374
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=95.60 E-value=0.0083 Score=55.66 Aligned_cols=34 Identities=21% Similarity=0.348 Sum_probs=30.9
Q ss_pred eEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccc
Q 010217 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHI 272 (515)
Q Consensus 225 ~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~ 272 (515)
.|+|||+||+|+-+|..|++. |.+|+|+++.+.+
T Consensus 4 dV~IIGaGpaGL~aA~~La~~--------------G~~V~v~Ek~~~~ 37 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAA--------------GHQVHLFDKSRGS 37 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHC--------------CCCEEEEECCCCC
Confidence 699999999999999999985 7899999988754
No 375
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.45 E-value=0.01 Score=50.75 Aligned_cols=36 Identities=22% Similarity=0.342 Sum_probs=32.3
Q ss_pred CCCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCC
Q 010217 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (515)
Q Consensus 56 ~~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~ 91 (515)
...++|+|||+|.-|..+|..|...|++|+++++++
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 346799999999999999999999999999999763
No 376
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.41 E-value=0.019 Score=55.74 Aligned_cols=35 Identities=11% Similarity=0.191 Sum_probs=31.2
Q ss_pred CCCeEEEECCcHHHHH-HHHhccCCCCeEEEEcCCC
Q 010217 57 KKKKVVVLGTGWAGTS-FLKNLNNPSYDVQVISPRN 91 (515)
Q Consensus 57 ~~~~VvIIGgG~AGls-aA~~L~~~g~~V~vie~~~ 91 (515)
.+++|.|||.|.+|++ +|..|.+.|++|++.|.+.
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 3579999999999997 7888889999999999864
No 377
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=95.06 E-value=0.13 Score=55.88 Aligned_cols=39 Identities=21% Similarity=0.282 Sum_probs=31.2
Q ss_pred CCeEEEcCcEEEEEeC--CeEEEEecCCCceEEEecCeEEEccC
Q 010217 291 DGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTG 332 (515)
Q Consensus 291 ~gV~v~~~~~v~~i~~--~~v~~~~~~~G~~~~i~~D~vi~a~G 332 (515)
.|++|++++.|++|+. +++.+.. .+|+. +.+|.||+|+.
T Consensus 542 ~gl~I~l~t~V~~I~~~~~~v~V~~-~~G~~--i~Ad~VIvA~P 582 (776)
T 4gut_A 542 EGLDIQLKSPVQCIDYSGDEVQVTT-TDGTG--YSAQKVLVTVP 582 (776)
T ss_dssp TTSCEESSCCEEEEECSSSSEEEEE-TTCCE--EEESEEEECCC
T ss_pred hCCcEEcCCeeEEEEEcCCEEEEEE-CCCcE--EEcCEEEECCC
Confidence 3789999999999974 4566554 56764 89999999986
No 378
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.00 E-value=0.058 Score=48.91 Aligned_cols=108 Identities=16% Similarity=0.166 Sum_probs=64.2
Q ss_pred ccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccccccccHHHHHHHHHHhhcCCeEEEcCcEE
Q 010217 222 RILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMV 301 (515)
Q Consensus 222 ~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v 301 (515)
++++|+|||||.+|...+..|.+. |.+|+++.+. ..+++ .+...+.+|+++...-
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~--------------GA~VtVvap~------~~~~l----~~l~~~~~i~~i~~~~- 84 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQE--------------GAAITVVAPT------VSAEI----NEWEAKGQLRVKRKKV- 84 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGG--------------CCCEEEECSS------CCHHH----HHHHHTTSCEEECSCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--------------CCEEEEECCC------CCHHH----HHHHHcCCcEEEECCC-
Confidence 568999999999999999999875 6899999763 23333 3334455676653211
Q ss_pred EEEeCCeEEEEecCCCceEEEecCeEEEccCCCCccchHHHHHHhCCCCCCceeeC----CCccccCCCCEEEecccc
Q 010217 302 VKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQTNRRALATD----EWLRVEGSDSIYALGDCA 375 (515)
Q Consensus 302 ~~i~~~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~~~~~~g~i~vd----~~l~t~~~~~IyA~GD~~ 375 (515)
..+.. -.+|+||.||| .+.+...+.... . .+|.|| +.+-+--.|.|+--||..
T Consensus 85 -------------~~~dL--~~adLVIaAT~---d~~~N~~I~~~a--k-~gi~VNvvD~p~~~~f~~Paiv~rg~l~ 141 (223)
T 3dfz_A 85 -------------GEEDL--LNVFFIVVATN---DQAVNKFVKQHI--K-NDQLVNMASSFSDGNIQIPAQFSRGRLS 141 (223)
T ss_dssp -------------CGGGS--SSCSEEEECCC---CTHHHHHHHHHS--C-TTCEEEC-----CCSEECCEEEEETTEE
T ss_pred -------------CHhHh--CCCCEEEECCC---CHHHHHHHHHHH--h-CCCEEEEeCCcccCeEEEeeEEEeCCEE
Confidence 11111 24899999999 444433333331 2 344444 122222457777777653
No 379
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=94.97 E-value=0.016 Score=48.07 Aligned_cols=33 Identities=21% Similarity=0.393 Sum_probs=30.1
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~ 90 (515)
.++|+|||+|.-|...|..|...|++|+++|++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 468999999999999999999999999999975
No 380
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=94.90 E-value=0.018 Score=60.73 Aligned_cols=41 Identities=20% Similarity=0.309 Sum_probs=38.2
Q ss_pred CCCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCccC
Q 010217 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFT 96 (515)
Q Consensus 56 ~~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~~~ 96 (515)
.+.+||+|||+|..|-..|..|++.|.+|++||+++++|+.
T Consensus 6 ~~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~ 46 (650)
T 1vg0_A 6 PSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGN 46 (650)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGG
T ss_pred CCcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCc
Confidence 44799999999999999999999999999999999999875
No 381
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.86 E-value=0.019 Score=52.12 Aligned_cols=35 Identities=26% Similarity=0.450 Sum_probs=32.2
Q ss_pred CCCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCC
Q 010217 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (515)
Q Consensus 56 ~~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~ 90 (515)
-..++|+|||||..|...|..|...|.+|+||++.
T Consensus 29 L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 29 LKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 34689999999999999999999999999999975
No 382
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=94.82 E-value=0.016 Score=46.47 Aligned_cols=34 Identities=26% Similarity=0.387 Sum_probs=30.7
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCC-CeEEEEcCC
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPS-YDVQVISPR 90 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g-~~V~vie~~ 90 (515)
++++|+|+|+|..|..++..|...| ++|++++++
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESC
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 3578999999999999999999889 999999975
No 383
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=94.75 E-value=0.018 Score=48.11 Aligned_cols=33 Identities=18% Similarity=0.390 Sum_probs=30.9
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~ 90 (515)
+++|+|+|+|.-|.+.|..|...|++|+++|++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 468999999999999999999999999999975
No 384
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=94.46 E-value=0.026 Score=47.94 Aligned_cols=33 Identities=27% Similarity=0.320 Sum_probs=30.8
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~ 90 (515)
+++|+|+|+|..|...|..|...|++|+++|++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 468999999999999999999999999999976
No 385
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=94.31 E-value=0.13 Score=54.74 Aligned_cols=45 Identities=9% Similarity=0.048 Sum_probs=32.7
Q ss_pred hcC-Ce-EEEcCcEEEEEe--CC---eEE---EEecCCCceEEEecCeEEEccCC
Q 010217 289 SRD-GI-DVKLGSMVVKVT--DK---EIF---TKVRGNGETSSMPYGMVVWSTGI 333 (515)
Q Consensus 289 ~~~-gV-~v~~~~~v~~i~--~~---~v~---~~~~~~G~~~~i~~D~vi~a~G~ 333 (515)
++. || +++.++.++++. ++ .+. +....+|+...+.++.||+|+|-
T Consensus 162 ~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG 216 (643)
T 1jnr_A 162 KMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGG 216 (643)
T ss_dssp HHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCC
T ss_pred HhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCc
Confidence 344 89 999999999885 34 443 23335677656999999999994
No 386
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=94.21 E-value=0.025 Score=57.34 Aligned_cols=35 Identities=26% Similarity=0.356 Sum_probs=32.1
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNY 92 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~ 92 (515)
.++|+|||.|.+|+++|..|.+.|++|+++|.+..
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~ 39 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMT 39 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSS
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCC
Confidence 47899999999999999999999999999998753
No 387
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=94.16 E-value=0.021 Score=53.63 Aligned_cols=34 Identities=26% Similarity=0.500 Sum_probs=31.8
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCC
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~ 90 (515)
..++|+|||||..|...|..|...|++|+||++.
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~ 45 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPD 45 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCC
Confidence 4689999999999999999999999999999975
No 388
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=94.14 E-value=0.028 Score=57.86 Aligned_cols=36 Identities=25% Similarity=0.357 Sum_probs=29.8
Q ss_pred ceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEecccccc
Q 010217 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL 273 (515)
Q Consensus 224 ~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l 273 (515)
|+|+|||+|..|+-+|..|++. |.+|+|+++++++.
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~--------------G~~V~VlEa~~~~G 37 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAA--------------GIPVLLLEQRDKPG 37 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHT--------------TCCEEEECCC----
T ss_pred CCEEEECCcHHHHHHHHHHHHC--------------CCcEEEEccCCCCC
Confidence 5899999999999999999984 78999999988763
No 389
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=93.73 E-value=0.13 Score=54.97 Aligned_cols=41 Identities=15% Similarity=0.067 Sum_probs=30.1
Q ss_pred CeEEEcCcEEEEEe--CC---eE---EEEecCCCceEEEecCeEEEccC
Q 010217 292 GIDVKLGSMVVKVT--DK---EI---FTKVRGNGETSSMPYGMVVWSTG 332 (515)
Q Consensus 292 gV~v~~~~~v~~i~--~~---~v---~~~~~~~G~~~~i~~D~vi~a~G 332 (515)
||+++.++.+.++. ++ .+ ...+..+|+...+.++.||+|||
T Consensus 182 gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATG 230 (662)
T 3gyx_A 182 QDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACG 230 (662)
T ss_dssp TTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCC
T ss_pred CcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCC
Confidence 88999998887763 33 33 33334567766799999999998
No 390
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=93.61 E-value=0.07 Score=54.23 Aligned_cols=74 Identities=18% Similarity=0.226 Sum_probs=52.8
Q ss_pred ccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccccccccHHHHHHHHHHhhcCCeEEEcCcEE
Q 010217 222 RILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMV 301 (515)
Q Consensus 222 ~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v 301 (515)
++++|.|||.|.+|+-+|..|.+. |.+|++.+..+... ++ ..+.|++.||+++.+...
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~--------------G~~V~~~D~~~~~~---~~-----~~~~L~~~gi~~~~g~~~ 65 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKL--------------GAIVTVNDGKPFDE---NP-----TAQSLLEEGIKVVCGSHP 65 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHT--------------TCEEEEEESSCGGG---CH-----HHHHHHHTTCEEEESCCC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhC--------------CCEEEEEeCCcccC---Ch-----HHHHHHhCCCEEEECCCh
Confidence 567999999999999999888875 78999998865211 11 124677789998876431
Q ss_pred EEEeCCeEEEEecCCCceEEEe-cCeEEEccCC
Q 010217 302 VKVTDKEIFTKVRGNGETSSMP-YGMVVWSTGI 333 (515)
Q Consensus 302 ~~i~~~~v~~~~~~~G~~~~i~-~D~vi~a~G~ 333 (515)
. +. .-. +|+||+++|+
T Consensus 66 ~---------------~~-~~~~~d~vv~spgi 82 (451)
T 3lk7_A 66 L---------------EL-LDEDFCYMIKNPGI 82 (451)
T ss_dssp G---------------GG-GGSCEEEEEECTTS
T ss_pred H---------------Hh-hcCCCCEEEECCcC
Confidence 0 00 012 7899999996
No 391
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=93.58 E-value=0.038 Score=48.50 Aligned_cols=34 Identities=26% Similarity=0.293 Sum_probs=31.1
Q ss_pred CCCeEEEECCcHHHHHHHHhccCC-CCeEEEEcCC
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNP-SYDVQVISPR 90 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~-g~~V~vie~~ 90 (515)
...+|+|||+|.-|..+|..|... |++|+++|++
T Consensus 38 ~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~ 72 (183)
T 3c85_A 38 GHAQVLILGMGRIGTGAYDELRARYGKISLGIEIR 72 (183)
T ss_dssp TTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECC
Confidence 356899999999999999999988 9999999976
No 392
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=93.56 E-value=0.036 Score=46.11 Aligned_cols=33 Identities=27% Similarity=0.422 Sum_probs=30.3
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~ 90 (515)
+++|+|+|+|.-|...|..|...|++|++++++
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 467999999999999999999999999999975
No 393
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=93.44 E-value=0.04 Score=56.04 Aligned_cols=35 Identities=29% Similarity=0.301 Sum_probs=32.4
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCC
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~ 91 (515)
..++|+|||.|.+|+++|..|.+.|++|++.|.+.
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 36899999999999999999999999999999864
No 394
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=93.27 E-value=0.081 Score=44.31 Aligned_cols=33 Identities=21% Similarity=0.469 Sum_probs=30.6
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~ 90 (515)
.++|+|||+|..|...|..|...|++|+++++.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~ 53 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRN 53 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCC
Confidence 579999999999999999999999999999876
No 395
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=92.93 E-value=0.072 Score=52.75 Aligned_cols=35 Identities=23% Similarity=0.277 Sum_probs=32.1
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCC
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~ 91 (515)
...+|+|||+|.+|+.+|..|...|.+|+++|+++
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 35799999999999999999999999999999874
No 396
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=92.75 E-value=0.058 Score=48.80 Aligned_cols=32 Identities=19% Similarity=0.354 Sum_probs=30.0
Q ss_pred CeEEEECCcHHHHHHHHhccCCCCeEEEEcCC
Q 010217 59 KKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (515)
Q Consensus 59 ~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~ 90 (515)
++|+|||+|.-|...|..|...|++|+++|++
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~ 32 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKD 32 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 47999999999999999999999999999976
No 397
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=92.40 E-value=0.096 Score=52.83 Aligned_cols=33 Identities=24% Similarity=0.414 Sum_probs=30.2
Q ss_pred ceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccc
Q 010217 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAAD 270 (515)
Q Consensus 224 ~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~ 270 (515)
++|+|||||++|+-+|..|++. |.+|+|+++.+
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~--------------G~~V~viE~~~ 55 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQH--------------DVDVTVYTDRK 55 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHT--------------TCEEEEEESCC
T ss_pred CCEEEECCcHHHHHHHHHHHHC--------------CCeEEEEcCCC
Confidence 4899999999999999999985 78999999876
No 398
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=92.38 E-value=0.12 Score=53.14 Aligned_cols=37 Identities=35% Similarity=0.401 Sum_probs=32.1
Q ss_pred cceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEecccccc
Q 010217 223 ILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL 273 (515)
Q Consensus 223 ~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l 273 (515)
.++|+|||+|.+|+.+|..|.+. |.+|+|+++.+++.
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~~--------------g~~v~vlE~~~~~g 69 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAGA--------------GHQVTVLEASERPG 69 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHH--------------TCEEEEECSSSSSB
T ss_pred CCCEEEECCCHHHHHHHHHHHhC--------------CCeEEEEECCCCCC
Confidence 45899999999999999999985 68999999877653
No 399
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=92.32 E-value=0.1 Score=49.86 Aligned_cols=34 Identities=21% Similarity=0.329 Sum_probs=31.2
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~ 91 (515)
.++|.|||+|.-|.+.|..|+..|++|+++|+++
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4689999999999999999999999999999763
No 400
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=92.25 E-value=0.12 Score=53.19 Aligned_cols=36 Identities=22% Similarity=0.536 Sum_probs=30.7
Q ss_pred ceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccc
Q 010217 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHI 272 (515)
Q Consensus 224 ~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~ 272 (515)
-.|+|||||.+|+-+|..|++. .|.+|+|+++++++
T Consensus 11 ~DVvIIGaGisGLsaA~~L~k~-------------~G~~V~VlE~~~~~ 46 (513)
T 4gde_A 11 VDVLVIGAGPTGLGAAKRLNQI-------------DGPSWMIVDSNETP 46 (513)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH-------------CCSCEEEEESSSSC
T ss_pred CCEEEECCcHHHHHHHHHHHhh-------------CCCCEEEEECCCCC
Confidence 3799999999999999999864 36899999887765
No 401
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=92.25 E-value=0.098 Score=50.72 Aligned_cols=37 Identities=22% Similarity=0.238 Sum_probs=32.1
Q ss_pred CCCCCeEEEECCcHHHHHHHHhccCCCC-eEEEEcCCC
Q 010217 55 GIKKKKVVVLGTGWAGTSFLKNLNNPSY-DVQVISPRN 91 (515)
Q Consensus 55 ~~~~~~VvIIGgG~AGlsaA~~L~~~g~-~V~vie~~~ 91 (515)
..++++|+|||+|.-|.+.|..|+..|+ +|+++|.+.
T Consensus 6 ~~~~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 6 VQRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CSCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 3445799999999999999999998888 999999764
No 402
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=92.18 E-value=0.18 Score=48.67 Aligned_cols=71 Identities=20% Similarity=0.132 Sum_probs=50.1
Q ss_pred cceEEEECCChhHHH-HHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccccccccHHHHHHHHHHhhcCCeEEEcCcEE
Q 010217 223 ILHFVIVGGGPTGVE-FAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMV 301 (515)
Q Consensus 223 ~~~vvVvGgG~~g~E-~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v 301 (515)
.++|.|||.|.+|+. +|..|.+. |.+|++.+..+.. + ..+.|++.||+++.+...
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~--------------G~~V~~~D~~~~~-----~-----~~~~L~~~gi~v~~g~~~ 59 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEA--------------GFEVSGCDAKMYP-----P-----MSTQLEALGIDVYEGFDA 59 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHT--------------TCEEEEEESSCCT-----T-----HHHHHHHTTCEEEESCCG
T ss_pred CcEEEEEEECHHHHHHHHHHHHhC--------------CCEEEEEcCCCCc-----H-----HHHHHHhCCCEEECCCCH
Confidence 469999999999997 77777774 7899999886531 1 124567789988754210
Q ss_pred EEEeCCeEEEEecCCCceEE-EecCeEEEccCC
Q 010217 302 VKVTDKEIFTKVRGNGETSS-MPYGMVVWSTGI 333 (515)
Q Consensus 302 ~~i~~~~v~~~~~~~G~~~~-i~~D~vi~a~G~ 333 (515)
+... -.+|+||.++|+
T Consensus 60 ----------------~~l~~~~~d~vV~Spgi 76 (326)
T 3eag_A 60 ----------------AQLDEFKADVYVIGNVA 76 (326)
T ss_dssp ----------------GGGGSCCCSEEEECTTC
T ss_pred ----------------HHcCCCCCCEEEECCCc
Confidence 1100 148999999996
No 403
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=92.09 E-value=0.12 Score=51.67 Aligned_cols=34 Identities=32% Similarity=0.355 Sum_probs=30.6
Q ss_pred eEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccc
Q 010217 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHI 272 (515)
Q Consensus 225 ~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~ 272 (515)
+|+|||+|.+|+-+|..|++. |.+|+|+++.+.+
T Consensus 2 dVvVIGaGiaGLsaA~~La~~--------------G~~V~vlE~~~~~ 35 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLARN--------------GHEIIVLEKSAMI 35 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHHT--------------TCEEEEECSSSSS
T ss_pred cEEEECCCHHHHHHHHHHHHC--------------CCeEEEEeCCCCC
Confidence 799999999999999999984 6899999998764
No 404
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=92.09 E-value=0.076 Score=52.15 Aligned_cols=35 Identities=26% Similarity=0.256 Sum_probs=31.9
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCC
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~ 91 (515)
...+|+|||+|..|+.+|..|...|.+|+++|+++
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 35799999999999999999999999999999874
No 405
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=92.00 E-value=0.1 Score=50.38 Aligned_cols=33 Identities=27% Similarity=0.351 Sum_probs=30.3
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~ 90 (515)
+++|.|||+|.-|.+.|..|.+.|++|++++++
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (320)
T 3i83_A 2 SLNILVIGTGAIGSFYGALLAKTGHCVSVVSRS 34 (320)
T ss_dssp -CEEEEESCCHHHHHHHHHHHHTTCEEEEECST
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 479999999999999999999999999999976
No 406
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=91.67 E-value=0.22 Score=41.32 Aligned_cols=33 Identities=21% Similarity=0.384 Sum_probs=29.5
Q ss_pred ceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccc
Q 010217 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAAD 270 (515)
Q Consensus 224 ~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~ 270 (515)
.+|+|+|.|..|..+|..|... +.+|+++++.+
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~--------------g~~v~vid~~~ 40 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLAS--------------DIPLVVIETSR 40 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT--------------TCCEEEEESCH
T ss_pred CCEEEECcCHHHHHHHHHHHHC--------------CCCEEEEECCH
Confidence 4899999999999999999874 68999999865
No 407
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=91.54 E-value=0.12 Score=50.69 Aligned_cols=35 Identities=11% Similarity=0.126 Sum_probs=32.1
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNY 92 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~ 92 (515)
+++|+|||||..|..+++.+++.|++|+++|+++.
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 57999999999999999999999999999997754
No 408
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=91.48 E-value=0.16 Score=50.92 Aligned_cols=34 Identities=24% Similarity=0.325 Sum_probs=30.8
Q ss_pred eEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccc
Q 010217 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHI 272 (515)
Q Consensus 225 ~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~ 272 (515)
+|+|||+|.+|+-+|..|++. |.+|+|+++.+.+
T Consensus 2 dVvVIGaGiaGLsaA~~La~~--------------G~~V~vlE~~~~~ 35 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSKA--------------GHEVEVFERLPIT 35 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHHT--------------TCEEEEECSSSSS
T ss_pred cEEEECCCHHHHHHHHHHHhC--------------CCceEEEeCCCCC
Confidence 799999999999999999984 6899999998764
No 409
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=91.45 E-value=0.1 Score=51.17 Aligned_cols=35 Identities=29% Similarity=0.340 Sum_probs=31.5
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCC-eEEEEcCCC
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSY-DVQVISPRN 91 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~-~V~vie~~~ 91 (515)
...+|||+|||.||+.+|..|...|. +|+++|++.
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 35799999999999999999988898 899999873
No 410
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=91.44 E-value=0.26 Score=41.70 Aligned_cols=36 Identities=17% Similarity=0.198 Sum_probs=31.1
Q ss_pred ccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEecccc
Q 010217 222 RILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADH 271 (515)
Q Consensus 222 ~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~ 271 (515)
.+++|+|+|+|.+|..+|..|... +.+|+++++.+.
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~--------------g~~V~vid~~~~ 53 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSS--------------GHSVVVVDKNEY 53 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--------------TCEEEEEESCGG
T ss_pred CCCcEEEECCCHHHHHHHHHHHhC--------------CCeEEEEECCHH
Confidence 567999999999999999999874 679999988754
No 411
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=91.31 E-value=0.13 Score=51.35 Aligned_cols=34 Identities=29% Similarity=0.379 Sum_probs=31.3
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~ 91 (515)
..+|+|||+|.+|+.+|..+...|.+|+++|+++
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 5799999999999999999999999999999763
No 412
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=91.21 E-value=0.14 Score=51.94 Aligned_cols=41 Identities=34% Similarity=0.524 Sum_probs=31.1
Q ss_pred ceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccc
Q 010217 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHI 272 (515)
Q Consensus 224 ~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~ 272 (515)
++|+|||||.+|+-+|..|.+.+.+ -.++.+|+|+++.+++
T Consensus 6 ~dVvIIGaGiaGLsaA~~L~~~G~~--------~~~~~~V~vlEa~~~~ 46 (470)
T 3i6d_A 6 KHVVIIGGGITGLAAAFYMEKEIKE--------KNLPLELTLVEASPRV 46 (470)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHTT--------TTCSEEEEEECSSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHhccc--------cCCCCCEEEEECCCCC
Confidence 4899999999999999999986310 0012799999987543
No 413
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=90.98 E-value=0.16 Score=50.30 Aligned_cols=35 Identities=23% Similarity=0.275 Sum_probs=31.8
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCC
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~ 91 (515)
...+|+|||+|.+|+.++..+...|.+|+++|+++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 46799999999999999999999999999999764
No 414
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=90.95 E-value=0.17 Score=49.21 Aligned_cols=33 Identities=24% Similarity=0.419 Sum_probs=30.0
Q ss_pred eEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEecccc
Q 010217 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADH 271 (515)
Q Consensus 225 ~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~ 271 (515)
.|+|||||.+|+-+|..|++. |.+|+|+++.+.
T Consensus 6 dvvIIG~G~~Gl~~A~~La~~--------------G~~V~vlE~~~~ 38 (369)
T 3dme_A 6 DCIVIGAGVVGLAIARALAAG--------------GHEVLVAEAAEG 38 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSS
T ss_pred CEEEECCCHHHHHHHHHHHhC--------------CCeEEEEeCCCC
Confidence 899999999999999999984 789999999863
No 415
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=90.90 E-value=0.12 Score=50.53 Aligned_cols=34 Identities=32% Similarity=0.401 Sum_probs=31.1
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCC-eEEEEcCC
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSY-DVQVISPR 90 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~-~V~vie~~ 90 (515)
...+|||+|+|.+|+.+|..|...|. +|+++|+.
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 35899999999999999999998888 79999987
No 416
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=90.85 E-value=0.16 Score=51.64 Aligned_cols=34 Identities=26% Similarity=0.518 Sum_probs=29.1
Q ss_pred ceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCc--EEEEEecccc
Q 010217 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSV--KITLLEAADH 271 (515)
Q Consensus 224 ~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~--~Vtlv~~~~~ 271 (515)
++|+|||||.+|+-+|..|.+. +. +|+|+++.++
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~--------------G~~~~V~vlEa~~~ 38 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRA--------------PCPPKVVLVESSER 38 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTS--------------SSCCEEEEECSSSS
T ss_pred ceEEEECCcHHHHHHHHHHHhC--------------CCCCcEEEEeCCCC
Confidence 3899999999999999999974 56 8999987553
No 417
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=90.83 E-value=0.17 Score=50.72 Aligned_cols=34 Identities=32% Similarity=0.618 Sum_probs=30.5
Q ss_pred eEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccc
Q 010217 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHI 272 (515)
Q Consensus 225 ~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~ 272 (515)
+|+|||+|.+|+-+|..|++. |.+|+|+++++++
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~--------------G~~V~vlE~~~~~ 36 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNA--------------GKKVLLLEGGERL 36 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHT--------------TCCEEEECSSSSS
T ss_pred CEEEECCcHHHHHHHHHHHHc--------------CCeEEEEecCCCc
Confidence 799999999999999999985 6899999987654
No 418
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=90.81 E-value=0.21 Score=49.19 Aligned_cols=37 Identities=27% Similarity=0.384 Sum_probs=32.4
Q ss_pred ccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEecc-ccc
Q 010217 222 RILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAA-DHI 272 (515)
Q Consensus 222 ~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~-~~~ 272 (515)
...+|+|||+|.+|+-+|..|.+. |.+|+|+++. +++
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~--------------G~~V~VlE~~~~~v 80 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRA--------------GHDVTILEANANRV 80 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHT--------------SCEEEEECSCSSCC
T ss_pred CCceEEEECCCHHHHHHHHHHHHC--------------CCcEEEEecccccc
Confidence 456999999999999999999984 6899999998 655
No 419
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=90.75 E-value=0.13 Score=52.31 Aligned_cols=33 Identities=12% Similarity=0.143 Sum_probs=31.4
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~ 90 (515)
.++|+|||+|..|...+..|.+.|++|+|++++
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 589999999999999999999999999999985
No 420
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=90.64 E-value=0.16 Score=48.78 Aligned_cols=33 Identities=15% Similarity=0.270 Sum_probs=30.5
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCC--eEEEEcCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSY--DVQVISPR 90 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~--~V~vie~~ 90 (515)
+++|+|||+|..|.+.|..|...|+ +|+++|++
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~ 41 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIA 41 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 4699999999999999999998898 99999976
No 421
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=90.63 E-value=0.19 Score=49.52 Aligned_cols=33 Identities=30% Similarity=0.378 Sum_probs=29.5
Q ss_pred ceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccc
Q 010217 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAAD 270 (515)
Q Consensus 224 ~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~ 270 (515)
+.|+|||||+.|+++|..+++. |.+|+++++.+
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~--------------G~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRL--------------GVPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT--------------TCCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHHC--------------CCcEEEEeccC
Confidence 3799999999999999999985 68999999765
No 422
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=90.62 E-value=0.19 Score=50.33 Aligned_cols=35 Identities=31% Similarity=0.569 Sum_probs=31.2
Q ss_pred ceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCC-cEEEEEeccccc
Q 010217 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDS-VKITLLEAADHI 272 (515)
Q Consensus 224 ~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~-~~Vtlv~~~~~~ 272 (515)
.+|+|||+|.+|+-+|..|.+. + .+|+|+++.+++
T Consensus 7 ~~v~IIGaG~aGl~aA~~L~~~--------------g~~~v~v~E~~~~~ 42 (424)
T 2b9w_A 7 SRIAIIGAGPAGLAAGMYLEQA--------------GFHDYTILERTDHV 42 (424)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT--------------TCCCEEEECSSSCS
T ss_pred CCEEEECcCHHHHHHHHHHHhC--------------CCCcEEEEECCCCC
Confidence 5899999999999999999874 6 799999988765
No 423
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=90.62 E-value=0.12 Score=49.62 Aligned_cols=33 Identities=21% Similarity=0.360 Sum_probs=29.4
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~ 90 (515)
.++|.|||+|.-|.+.|..|.+.|++|++++++
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (312)
T 3hn2_A 2 SLRIAIVGAGALGLYYGALLQRSGEDVHFLLRR 34 (312)
T ss_dssp --CEEEECCSTTHHHHHHHHHHTSCCEEEECST
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEEcC
Confidence 468999999999999999999999999999975
No 424
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=90.60 E-value=0.16 Score=48.49 Aligned_cols=33 Identities=24% Similarity=0.336 Sum_probs=30.1
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~ 90 (515)
+++|.|||+|.-|...|..|.+.|++|++++++
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCeEEEECcCHHHHHHHHHHHhCCCcEEEEECC
Confidence 468999999999999999999999999999875
No 425
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=90.56 E-value=0.21 Score=48.93 Aligned_cols=35 Identities=26% Similarity=0.303 Sum_probs=31.9
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCC
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~ 91 (515)
+.++|.|||+|.-|.+.|..|++.|++|+++++++
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred cCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 45789999999999999999999999999999863
No 426
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=90.56 E-value=0.2 Score=48.30 Aligned_cols=70 Identities=17% Similarity=0.154 Sum_probs=45.6
Q ss_pred ccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEecccccccc-------cc-HHHHHHHHHHhhcCCe
Q 010217 222 RILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM-------FD-KRITAFAEEKFSRDGI 293 (515)
Q Consensus 222 ~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~~-------~~-~~~~~~~~~~l~~~gV 293 (515)
....|+|||+||.|+-+|..|.+. +.|.+|+|+++.+.+... ++ ..+...+...+++.||
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~------------r~G~~V~viEk~~~~GG~~~~~~~~~~~~~l~~~~~~~~~e~Gv 131 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKN------------RPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEI 131 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHH------------CTTSCEEEECSSSSCCTTTTCCSTTCCCEEEETTTHHHHHHTTC
T ss_pred cCCCEEEECCCHHHHHHHHHHHHh------------CCCCeEEEEECCCCCCceEEeCCccCCHHHHHHHHHHHHHHcCC
Confidence 345899999999999999999753 137899999998754221 00 0011223345566788
Q ss_pred EEEcCcEEEE
Q 010217 294 DVKLGSMVVK 303 (515)
Q Consensus 294 ~v~~~~~v~~ 303 (515)
++..+.....
T Consensus 132 ~~~~~~~~~~ 141 (326)
T 3fpz_A 132 PYEDEGDYVV 141 (326)
T ss_dssp CCEECSSEEE
T ss_pred EEEECCccee
Confidence 8776654433
No 427
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=90.39 E-value=0.17 Score=51.21 Aligned_cols=33 Identities=18% Similarity=0.329 Sum_probs=31.0
Q ss_pred CeEEEECCcHHHHHHHHhccCCCCeEEEEcCCC
Q 010217 59 KKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (515)
Q Consensus 59 ~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~ 91 (515)
++|.|||.|.-|+..|..|++.|++|+++|+++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 689999999999999999999999999999764
No 428
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=90.37 E-value=0.36 Score=39.93 Aligned_cols=34 Identities=18% Similarity=0.424 Sum_probs=29.6
Q ss_pred cceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccc
Q 010217 223 ILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAAD 270 (515)
Q Consensus 223 ~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~ 270 (515)
.++++|+|+|.+|..+|..|.+. |.+|+++++.+
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~--------------g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAA--------------GKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT--------------TCCEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--------------CCeEEEEECCH
Confidence 45899999999999999999874 68999998854
No 429
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=90.36 E-value=0.21 Score=44.77 Aligned_cols=36 Identities=14% Similarity=0.307 Sum_probs=31.6
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCC
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNY 92 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~ 92 (515)
..++|.|||+|.-|.+.|..|.+.|++|+++++++.
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 457899999999999999999999999999998754
No 430
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=90.25 E-value=0.2 Score=51.67 Aligned_cols=35 Identities=31% Similarity=0.481 Sum_probs=30.0
Q ss_pred cceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCC-cEEEEEecccc
Q 010217 223 ILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDS-VKITLLEAADH 271 (515)
Q Consensus 223 ~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~-~~Vtlv~~~~~ 271 (515)
..+|+|||+|.+|+-+|..|.+. | .+|+|++++++
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~--------------G~~~V~VlEa~~r 43 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQN--------------GIQDCLVLEARDR 43 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHT--------------TCCSEEEECSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhc--------------CCCCEEEEeCCCC
Confidence 35899999999999999999984 6 78898887664
No 431
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=90.24 E-value=0.19 Score=49.39 Aligned_cols=33 Identities=33% Similarity=0.345 Sum_probs=30.7
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~ 90 (515)
..+|+|+|+|.+|..++..|+..|.+|++++++
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~ 199 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDIN 199 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 479999999999999999999999999999976
No 432
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=90.20 E-value=0.22 Score=47.02 Aligned_cols=34 Identities=24% Similarity=0.275 Sum_probs=31.3
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~ 91 (515)
.++|.|||+|.-|.+.|..|+..|++|+++|+++
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 4789999999999999999999999999999764
No 433
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=90.08 E-value=0.86 Score=44.03 Aligned_cols=87 Identities=13% Similarity=0.170 Sum_probs=53.4
Q ss_pred ceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccccccccHHHHHHHHHHhhcCCeEEEcCcEEEE
Q 010217 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVK 303 (515)
Q Consensus 224 ~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~ 303 (515)
.+|+|||+|.+|.-+|..|.+. +.+|+++.|.++ .+.+++.|+.+.....-..
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~--------------g~~V~~~~r~~~-------------~~~~~~~g~~~~~~~~~~~ 56 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALA--------------GEAINVLARGAT-------------LQALQTAGLRLTEDGATHT 56 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHT--------------TCCEEEECCHHH-------------HHHHHHTCEEEEETTEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHC--------------CCEEEEEEChHH-------------HHHHHHCCCEEecCCCeEE
Confidence 3899999999999999999874 679999987421 1345567877653211110
Q ss_pred EeCCeEEEEecCCCceEEEecCeEEEccCCCCccchHHHHHHh
Q 010217 304 VTDKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQV 346 (515)
Q Consensus 304 i~~~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~ 346 (515)
+ .+.... +-+. .-++|+||+|+. .+.+...++.+
T Consensus 57 ~---~~~~~~--~~~~-~~~~D~Vilavk---~~~~~~~~~~l 90 (335)
T 3ghy_A 57 L---PVRATH--DAAA-LGEQDVVIVAVK---APALESVAAGI 90 (335)
T ss_dssp E---CCEEES--CHHH-HCCCSEEEECCC---HHHHHHHHGGG
T ss_pred E---eeeEEC--CHHH-cCCCCEEEEeCC---chhHHHHHHHH
Confidence 0 122221 1111 135899999986 34454555554
No 434
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=90.04 E-value=0.24 Score=47.38 Aligned_cols=32 Identities=28% Similarity=0.334 Sum_probs=29.8
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~ 90 (515)
+++|.|||+|.-|.+.|..|. .|++|++++++
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~ 33 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRR 33 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHh-cCCceEEEECC
Confidence 479999999999999999999 99999999976
No 435
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=90.00 E-value=0.25 Score=50.48 Aligned_cols=36 Identities=39% Similarity=0.552 Sum_probs=31.6
Q ss_pred cceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccc
Q 010217 223 ILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHI 272 (515)
Q Consensus 223 ~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~ 272 (515)
..+|+|||+|.+|+-+|..|.+. |.+|+|+++.+++
T Consensus 11 ~~~v~IIGaG~aGl~aA~~L~~~--------------g~~v~v~E~~~~~ 46 (489)
T 2jae_A 11 SHSVVVLGGGPAGLCSAFELQKA--------------GYKVTVLEARTRP 46 (489)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--------------TCEEEEECSSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHC--------------CCCEEEEeccCCC
Confidence 45899999999999999999874 6899999988765
No 436
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=89.81 E-value=0.25 Score=48.88 Aligned_cols=33 Identities=30% Similarity=0.423 Sum_probs=29.7
Q ss_pred ceEEEECCChhHHHHHHHHHH-hhHHHHHhhCcccCCC-cEEEEEeccc
Q 010217 224 LHFVIVGGGPTGVEFAAELHD-FVDEDLFKLYPKVKDS-VKITLLEAAD 270 (515)
Q Consensus 224 ~~vvVvGgG~~g~E~A~~l~~-~~~~~~~~~~p~~~~~-~~Vtlv~~~~ 270 (515)
..|+|||||.+|+.+|..|++ . + .+|+|+++.+
T Consensus 22 ~dVvIIG~G~~Gl~~A~~La~~~--------------G~~~V~vlE~~~ 56 (405)
T 2gag_B 22 YDAIIVGGGGHGLATAYFLAKNH--------------GITNVAVLEKGW 56 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHH--------------CCCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHhc--------------CCCcEEEEeCCC
Confidence 389999999999999999998 5 6 7999999876
No 437
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=89.78 E-value=0.23 Score=46.80 Aligned_cols=33 Identities=30% Similarity=0.314 Sum_probs=30.4
Q ss_pred CeEEEECCcHHHHHHHHhccCCCCeEEEEcCCC
Q 010217 59 KKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (515)
Q Consensus 59 ~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~ 91 (515)
++|.|||+|.-|.+.|..|.+.|++|+++++++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 379999999999999999999999999999874
No 438
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=89.78 E-value=0.22 Score=46.71 Aligned_cols=34 Identities=12% Similarity=0.268 Sum_probs=30.9
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCC
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~ 90 (515)
++++|+|.|+|.-|-..+..|...|++|+++.++
T Consensus 4 m~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~ 37 (286)
T 3ius_A 4 MTGTLLSFGHGYTARVLSRALAPQGWRIIGTSRN 37 (286)
T ss_dssp -CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESC
T ss_pred CcCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcC
Confidence 3579999999999999999999999999999876
No 439
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=89.77 E-value=0.29 Score=47.79 Aligned_cols=32 Identities=22% Similarity=0.315 Sum_probs=28.8
Q ss_pred ceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEecc
Q 010217 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAA 269 (515)
Q Consensus 224 ~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~ 269 (515)
..|+|||+|.+|+-+|..|++. +.+|+|+++.
T Consensus 7 ~dVvVIG~Gi~Gls~A~~La~~--------------G~~V~vle~~ 38 (363)
T 1c0p_A 7 KRVVVLGSGVIGLSSALILARK--------------GYSVHILARD 38 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--------------TCEEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHhC--------------CCEEEEEecc
Confidence 3899999999999999999874 6899999975
No 440
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=89.74 E-value=0.24 Score=47.46 Aligned_cols=36 Identities=25% Similarity=0.272 Sum_probs=32.5
Q ss_pred CCCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCC
Q 010217 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (515)
Q Consensus 56 ~~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~ 91 (515)
..+++|.|||.|.-|...|..|...|++|+++++++
T Consensus 19 ~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 19 SHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred ccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 446799999999999999999999999999999763
No 441
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=89.58 E-value=0.21 Score=47.85 Aligned_cols=34 Identities=18% Similarity=0.387 Sum_probs=30.9
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~ 91 (515)
..+|.|||+|.-|-.-|..++..|++|+|+|..+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4689999999999999999999999999999764
No 442
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=89.49 E-value=0.27 Score=45.92 Aligned_cols=34 Identities=18% Similarity=0.373 Sum_probs=31.3
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~ 91 (515)
.++++|||+|-+|-++|..|...|.+|+|+++..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 6899999999999999999998899999998763
No 443
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=89.45 E-value=0.27 Score=46.75 Aligned_cols=34 Identities=21% Similarity=0.202 Sum_probs=31.6
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~ 91 (515)
.++|.|||.|.-|...|..|.+.|++|+++++++
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 48 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRI 48 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSST
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 5789999999999999999999999999999774
No 444
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=89.43 E-value=0.24 Score=51.10 Aligned_cols=39 Identities=21% Similarity=0.195 Sum_probs=30.3
Q ss_pred CeEEEcCcEEEEEeC--CeEEEEecCCCceEEEecCeEEEccCC
Q 010217 292 GIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGI 333 (515)
Q Consensus 292 gV~v~~~~~v~~i~~--~~v~~~~~~~G~~~~i~~D~vi~a~G~ 333 (515)
|++++++++|++|+. +++.+. +.+|+. +.||.||++++.
T Consensus 226 g~~i~~~~~V~~i~~~~~~v~v~-~~~g~~--~~ad~VI~a~p~ 266 (520)
T 1s3e_A 226 GDRVKLERPVIYIDQTRENVLVE-TLNHEM--YEAKYVISAIPP 266 (520)
T ss_dssp GGGEESSCCEEEEECSSSSEEEE-ETTSCE--EEESEEEECSCG
T ss_pred CCcEEcCCeeEEEEECCCeEEEE-ECCCeE--EEeCEEEECCCH
Confidence 678999999999963 456644 456764 899999999984
No 445
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=89.38 E-value=1.6 Score=41.85 Aligned_cols=100 Identities=13% Similarity=0.194 Sum_probs=0.0
Q ss_pred hccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccccccccHHHHHHHHHHhhcCCeEEEcCcE
Q 010217 221 KRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSM 300 (515)
Q Consensus 221 ~~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~ 300 (515)
....+|+|||+|..|.-+|..|.+ .|.+|+++ +++... +.+++.|+.+.....
T Consensus 17 ~~~~kI~IiGaGa~G~~~a~~L~~--------------~G~~V~l~-~~~~~~------------~~i~~~g~~~~~~~~ 69 (318)
T 3hwr_A 17 FQGMKVAIMGAGAVGCYYGGMLAR--------------AGHEVILI-ARPQHV------------QAIEATGLRLETQSF 69 (318)
T ss_dssp ---CEEEEESCSHHHHHHHHHHHH--------------TTCEEEEE-CCHHHH------------HHHHHHCEEEECSSC
T ss_pred ccCCcEEEECcCHHHHHHHHHHHH--------------CCCeEEEE-EcHhHH------------HHHHhCCeEEEcCCC
Q ss_pred EEEEeCCeEEEEecCCCceEEEecCeEEEccCCCCccchHHHHHHhCC-CCCCceee
Q 010217 301 VVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ-TNRRALAT 356 (515)
Q Consensus 301 v~~i~~~~v~~~~~~~G~~~~i~~D~vi~a~G~~~~p~~~~l~~~~~~-~~~g~i~v 356 (515)
-... .+........- -++|+||+|+. ...+...++.+.- -..+.+++
T Consensus 70 ~~~~---~~~~~~~~~~~---~~~D~vilavk---~~~~~~~l~~l~~~l~~~~~iv 117 (318)
T 3hwr_A 70 DEQV---KVSASSDPSAV---QGADLVLFCVK---STDTQSAALAMKPALAKSALVL 117 (318)
T ss_dssp EEEE---CCEEESCGGGG---TTCSEEEECCC---GGGHHHHHHHHTTTSCTTCEEE
T ss_pred cEEE---eeeeeCCHHHc---CCCCEEEEEcc---cccHHHHHHHHHHhcCCCCEEE
No 446
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=89.29 E-value=0.23 Score=47.72 Aligned_cols=34 Identities=21% Similarity=0.406 Sum_probs=30.9
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCC-eEEEEcCCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSY-DVQVISPRN 91 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~-~V~vie~~~ 91 (515)
+++|.|||+|.-|.+.|..|+..|+ +|+++|.+.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 4689999999999999999998888 999999764
No 447
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=89.28 E-value=0.23 Score=45.36 Aligned_cols=33 Identities=18% Similarity=0.240 Sum_probs=29.3
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCC
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~ 90 (515)
..++|+|+|+|..|...|..|...|+ |+++|++
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~ 40 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV-FVLAEDE 40 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE-EEEESCG
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe-EEEEECC
Confidence 35789999999999999999999999 9999976
No 448
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=89.24 E-value=0.21 Score=46.26 Aligned_cols=34 Identities=15% Similarity=0.322 Sum_probs=30.9
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCC-eEEEEcCCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSY-DVQVISPRN 91 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~-~V~vie~~~ 91 (515)
.++|+|||+|-.|..+|..|++.|. +++|+|+..
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 4799999999999999999999997 799999763
No 449
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=89.18 E-value=0.3 Score=47.48 Aligned_cols=38 Identities=18% Similarity=0.292 Sum_probs=29.2
Q ss_pred eEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccc
Q 010217 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAAD 270 (515)
Q Consensus 225 ~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~ 270 (515)
.|+|||||.+|+-+|..|++.+..+ .++.+|+|+++..
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~--------~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSV--------LQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTT--------SSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhcccc--------CCCceEEEEECCC
Confidence 7999999999999999998853000 0127999999874
No 450
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=89.13 E-value=0.34 Score=46.07 Aligned_cols=34 Identities=15% Similarity=0.307 Sum_probs=30.9
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCC-eEEEEcCC
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSY-DVQVISPR 90 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~-~V~vie~~ 90 (515)
..++|+|||+|.+|.++|..|...|+ +|+|+++.
T Consensus 140 ~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~ 174 (297)
T 2egg_A 140 DGKRILVIGAGGGARGIYFSLLSTAAERIDMANRT 174 (297)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSS
T ss_pred CCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 35799999999999999999999998 89999876
No 451
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=89.08 E-value=0.3 Score=47.24 Aligned_cols=34 Identities=24% Similarity=0.414 Sum_probs=30.8
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCC-eEEEEcCCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSY-DVQVISPRN 91 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~-~V~vie~~~ 91 (515)
+++|.|||+|.-|.+.|..|+..|+ +|+++|.+.
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 4699999999999999999998888 999999764
No 452
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=89.05 E-value=0.28 Score=45.98 Aligned_cols=34 Identities=18% Similarity=0.269 Sum_probs=30.8
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCC
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~ 90 (515)
..++++|+|+|-+|.++|..|...|.+|+++++.
T Consensus 118 ~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 118 PGLRILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 3578999999999999999999999999999876
No 453
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=88.95 E-value=0.3 Score=49.30 Aligned_cols=34 Identities=32% Similarity=0.606 Sum_probs=29.5
Q ss_pred ceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEecccc
Q 010217 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADH 271 (515)
Q Consensus 224 ~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~ 271 (515)
.+|+|||+|..|+-+|..|.+. +.+|+|+++.++
T Consensus 6 ~~v~iiG~G~~Gl~aA~~l~~~--------------g~~v~v~E~~~~ 39 (453)
T 2yg5_A 6 RDVAIVGAGPSGLAAATALRKA--------------GLSVAVIEARDR 39 (453)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHC--------------CCcEEEEECCCC
Confidence 4899999999999999999885 678999987654
No 454
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=88.84 E-value=0.29 Score=49.12 Aligned_cols=39 Identities=18% Similarity=0.165 Sum_probs=34.3
Q ss_pred CCCCCCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCC
Q 010217 53 EMGIKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (515)
Q Consensus 53 ~~~~~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~ 91 (515)
+..+.+.+|.|||.|+-||..|..|+..|++|+.+|-++
T Consensus 16 p~~~~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 16 PRGSHMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CTTCCCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCCCCCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 344567899999999999999999999999999999663
No 455
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=88.83 E-value=0.28 Score=46.74 Aligned_cols=34 Identities=12% Similarity=0.061 Sum_probs=31.0
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCC
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~ 90 (515)
++++|.|||.|.-|...|..|.+.|++|++++++
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~ 39 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLN 39 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 3579999999999999999999999999999876
No 456
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=88.82 E-value=0.34 Score=47.89 Aligned_cols=35 Identities=26% Similarity=0.503 Sum_probs=31.0
Q ss_pred eEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEecccccc
Q 010217 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL 273 (515)
Q Consensus 225 ~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l 273 (515)
+|+|||+|.+|+-+|..|.+. +.+|+++++.+++.
T Consensus 5 ~v~iiG~G~~Gl~~A~~l~~~--------------g~~v~v~E~~~~~G 39 (384)
T 2bi7_A 5 KILIVGAGFSGAVIGRQLAEK--------------GHQVHIIDQRDHIG 39 (384)
T ss_dssp EEEEECCSHHHHHHHHHHHTT--------------TCEEEEEESSSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHC--------------CCcEEEEEecCCcC
Confidence 899999999999999999874 68999999987664
No 457
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=88.77 E-value=0.28 Score=48.28 Aligned_cols=33 Identities=27% Similarity=0.303 Sum_probs=30.8
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~ 90 (515)
.++|+|+|+|..|..+|..|+..|++|++++++
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~ 198 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVN 198 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 589999999999999999999999999999976
No 458
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=88.62 E-value=0.16 Score=48.29 Aligned_cols=34 Identities=21% Similarity=0.326 Sum_probs=30.5
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~ 91 (515)
+++|.|||+|.-|.+.|..|.+.|++|++++++.
T Consensus 2 ~mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 2 SLSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred CcEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 4689999999999999999998899999999873
No 459
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=88.49 E-value=0.29 Score=49.97 Aligned_cols=34 Identities=18% Similarity=0.228 Sum_probs=31.5
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~ 91 (515)
.++|.|||.|.-|+..|..|++.|++|+++|.++
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 5799999999999999999999999999999763
No 460
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=88.42 E-value=1.1 Score=42.65 Aligned_cols=32 Identities=25% Similarity=0.417 Sum_probs=28.1
Q ss_pred eEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccc
Q 010217 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAAD 270 (515)
Q Consensus 225 ~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~ 270 (515)
+|+|||+|..|.-+|..|.+. +.+|+++.+.+
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~--------------g~~V~~~~r~~ 36 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQG--------------GNDVTLIDQWP 36 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--------------TCEEEEECSCH
T ss_pred eEEEECcCHHHHHHHHHHHhC--------------CCcEEEEECCH
Confidence 899999999999999999874 67999998754
No 461
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=88.38 E-value=0.37 Score=49.29 Aligned_cols=41 Identities=17% Similarity=0.218 Sum_probs=31.3
Q ss_pred cCC-eEEEcCcEEEEEeC--CeEEEEecCCCceEEEecCeEEEccCC
Q 010217 290 RDG-IDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGI 333 (515)
Q Consensus 290 ~~g-V~v~~~~~v~~i~~--~~v~~~~~~~G~~~~i~~D~vi~a~G~ 333 (515)
+.| ++++++++|++|+. +++.+.. .+|+. +.+|.||+|+|.
T Consensus 267 ~~g~~~i~~~~~V~~i~~~~~~v~v~~-~~g~~--~~ad~vI~a~~~ 310 (495)
T 2vvm_A 267 GTGRLGYVFGCPVRSVVNERDAARVTA-RDGRE--FVAKRVVCTIPL 310 (495)
T ss_dssp TTTCEEEESSCCEEEEEECSSSEEEEE-TTCCE--EEEEEEEECCCG
T ss_pred hcCceEEEeCCEEEEEEEcCCEEEEEE-CCCCE--EEcCEEEECCCH
Confidence 356 88999999999963 4565543 56754 899999999994
No 462
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=88.34 E-value=0.38 Score=45.33 Aligned_cols=34 Identities=21% Similarity=0.399 Sum_probs=30.9
Q ss_pred CCCeEEEECC-cHHHHHHHHhccCCCCeEEEEcCC
Q 010217 57 KKKKVVVLGT-GWAGTSFLKNLNNPSYDVQVISPR 90 (515)
Q Consensus 57 ~~~~VvIIGg-G~AGlsaA~~L~~~g~~V~vie~~ 90 (515)
++++|.|||+ |.-|.+.|..|...|++|++++++
T Consensus 10 mmm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~ 44 (286)
T 3c24_A 10 GPKTVAILGAGGKMGARITRKIHDSAHHLAAIEIA 44 (286)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCS
T ss_pred cCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 3579999999 999999999999999999999875
No 463
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=88.34 E-value=0.29 Score=44.48 Aligned_cols=35 Identities=20% Similarity=0.340 Sum_probs=30.8
Q ss_pred CCCCeEEEECC-cHHHHHHHHhccCCCCeEEEEcCC
Q 010217 56 IKKKKVVVLGT-GWAGTSFLKNLNNPSYDVQVISPR 90 (515)
Q Consensus 56 ~~~~~VvIIGg-G~AGlsaA~~L~~~g~~V~vie~~ 90 (515)
-+.++|+|.|| |.-|..++..|...|++|++++++
T Consensus 19 l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~ 54 (236)
T 3e8x_A 19 FQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRN 54 (236)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred cCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECC
Confidence 34679999998 999999999999999999999976
No 464
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=88.33 E-value=0.41 Score=48.65 Aligned_cols=36 Identities=42% Similarity=0.538 Sum_probs=30.0
Q ss_pred ceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEecccc
Q 010217 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADH 271 (515)
Q Consensus 224 ~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~ 271 (515)
.+|+|||+|.+|+-+|..|.+.+ ++.+|+|+++.++
T Consensus 5 ~~v~IiGaG~~Gl~~A~~L~~~g------------~~~~v~v~E~~~~ 40 (475)
T 3lov_A 5 KRLVIVGGGITGLAAAYYAERAF------------PDLNITLLEAGER 40 (475)
T ss_dssp CEEEEECCBHHHHHHHHHHHHHC------------TTSEEEEECSSSS
T ss_pred ccEEEECCCHHHHHHHHHHHHhC------------CCCCEEEEECCCC
Confidence 38999999999999999999862 1279999988654
No 465
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=88.30 E-value=0.37 Score=47.83 Aligned_cols=36 Identities=25% Similarity=0.473 Sum_probs=31.3
Q ss_pred ceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEecccccc
Q 010217 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL 273 (515)
Q Consensus 224 ~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l 273 (515)
.+|+|||||++|+-+|..|.+. +.+|+|+++.+++.
T Consensus 30 ~dv~IIGaG~aGl~aA~~l~~~--------------g~~v~v~E~~~~~G 65 (397)
T 3hdq_A 30 FDYLIVGAGFAGSVLAERLASS--------------GQRVLIVDRRPHIG 65 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSSSS
T ss_pred CCEEEECccHHHHHHHHHHHHC--------------CCceEEEeccCCCC
Confidence 4899999999999999999874 68999999887653
No 466
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=88.30 E-value=0.31 Score=48.06 Aligned_cols=34 Identities=29% Similarity=0.345 Sum_probs=31.3
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCC
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~ 90 (515)
..++|+|||+|..|..+|..+...|++|+++|++
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~ 200 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDIN 200 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 4689999999999999999999999999999976
No 467
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=88.28 E-value=0.35 Score=48.98 Aligned_cols=37 Identities=19% Similarity=0.244 Sum_probs=32.9
Q ss_pred ceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccccc
Q 010217 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN 274 (515)
Q Consensus 224 ~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l~ 274 (515)
..|+|||+|..|+-+|..|++. |.+|+++++.+++..
T Consensus 12 ~dvvVIGaG~~GL~aA~~La~~--------------G~~V~vlE~~~~~GG 48 (453)
T 2bcg_G 12 YDVIVLGTGITECILSGLLSVD--------------GKKVLHIDKQDHYGG 48 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSSSCG
T ss_pred CCEEEECcCHHHHHHHHHHHHC--------------CCeEEEEeCCCCCCc
Confidence 3899999999999999999984 789999999988754
No 468
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=88.28 E-value=0.31 Score=49.64 Aligned_cols=35 Identities=29% Similarity=0.491 Sum_probs=29.8
Q ss_pred cceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEecccc
Q 010217 223 ILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADH 271 (515)
Q Consensus 223 ~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~ 271 (515)
..+|+|||+|.+|+-+|..|.+. |.+|+|+++.++
T Consensus 16 ~~~v~iiG~G~~Gl~aa~~l~~~--------------g~~v~v~E~~~~ 50 (478)
T 2ivd_A 16 GMNVAVVGGGISGLAVAHHLRSR--------------GTDAVLLESSAR 50 (478)
T ss_dssp -CCEEEECCBHHHHHHHHHHHTT--------------TCCEEEECSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHHC--------------CCCEEEEEcCCC
Confidence 35899999999999999999874 678999988764
No 469
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=88.20 E-value=0.32 Score=47.12 Aligned_cols=35 Identities=29% Similarity=0.369 Sum_probs=31.1
Q ss_pred CCCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCC
Q 010217 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (515)
Q Consensus 56 ~~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~ 90 (515)
.++++|.|||+|.-|.+.|..|.+.|++|+++++.
T Consensus 12 ~~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 12 HMEMRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred ccCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 35689999999999999999999999999999975
No 470
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=88.18 E-value=0.32 Score=46.48 Aligned_cols=32 Identities=25% Similarity=0.341 Sum_probs=29.6
Q ss_pred CeEEEECCcHHHHHHHHhccCCCC--eEEEEcCC
Q 010217 59 KKVVVLGTGWAGTSFLKNLNNPSY--DVQVISPR 90 (515)
Q Consensus 59 ~~VvIIGgG~AGlsaA~~L~~~g~--~V~vie~~ 90 (515)
++|+|||+|..|.+.|..|+..|+ +|+++|.+
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~ 34 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRD 34 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 489999999999999999998888 99999976
No 471
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=88.11 E-value=0.4 Score=47.99 Aligned_cols=35 Identities=20% Similarity=0.223 Sum_probs=30.7
Q ss_pred CCCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCC
Q 010217 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (515)
Q Consensus 56 ~~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~ 91 (515)
...++|.|||.|.-|+..|..|++ |++|+++|.++
T Consensus 34 ~~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~ 68 (432)
T 3pid_A 34 SEFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQ 68 (432)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred cCCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCH
Confidence 345699999999999999999998 99999999763
No 472
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=88.09 E-value=0.41 Score=45.32 Aligned_cols=34 Identities=21% Similarity=0.335 Sum_probs=30.8
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCC
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~ 91 (515)
..++|.|||+|.-|-+.|..|+ .|++|+++|+++
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 4689999999999999999999 999999999763
No 473
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=88.08 E-value=0.31 Score=47.24 Aligned_cols=33 Identities=15% Similarity=0.281 Sum_probs=30.2
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~ 90 (515)
.++|.|||+|.-|.+.|..|.+.|++|+++++.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 368999999999999999999999999999864
No 474
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=88.08 E-value=0.28 Score=48.99 Aligned_cols=34 Identities=18% Similarity=0.200 Sum_probs=31.5
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~ 91 (515)
..+|+|||.|.-|...|..|...|++|++||.++
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~ 37 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDP 37 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 4689999999999999999999999999999874
No 475
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=88.05 E-value=0.38 Score=49.30 Aligned_cols=35 Identities=23% Similarity=0.428 Sum_probs=31.2
Q ss_pred ceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccccc
Q 010217 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHI 272 (515)
Q Consensus 224 ~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~ 272 (515)
.+|+|||+|.+|+-+|..|.+. |.+|+|+++.+++
T Consensus 14 ~~v~iiG~G~~Gl~aA~~l~~~--------------g~~v~v~E~~~~~ 48 (504)
T 1sez_A 14 KRVAVIGAGVSGLAAAYKLKIH--------------GLNVTVFEAEGKA 48 (504)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT--------------SCEEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHC--------------CCcEEEEEeCCCC
Confidence 5899999999999999999874 6899999988765
No 476
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=88.04 E-value=0.55 Score=47.70 Aligned_cols=34 Identities=21% Similarity=0.237 Sum_probs=31.4
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~ 91 (515)
.++|.|||+|.-|...|..|+..|++|+++|+++
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4689999999999999999999999999999764
No 477
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=88.02 E-value=0.33 Score=46.62 Aligned_cols=34 Identities=21% Similarity=0.367 Sum_probs=29.9
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCC--eEEEEcCC
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSY--DVQVISPR 90 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~--~V~vie~~ 90 (515)
+++||+|||+|..|.++|..|...+. +|+++|..
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~ 41 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVF 41 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 35799999999999999999997777 89999975
No 478
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=88.00 E-value=1.6 Score=41.52 Aligned_cols=31 Identities=26% Similarity=0.422 Sum_probs=27.4
Q ss_pred eEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccc
Q 010217 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAAD 270 (515)
Q Consensus 225 ~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~ 270 (515)
+|+|||+|.+|.-+|..|. . +.+|+++.|.+
T Consensus 4 kI~IiGaGa~G~~~a~~L~-~--------------g~~V~~~~r~~ 34 (307)
T 3ego_A 4 KIGIIGGGSVGLLCAYYLS-L--------------YHDVTVVTRRQ 34 (307)
T ss_dssp EEEEECCSHHHHHHHHHHH-T--------------TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHh-c--------------CCceEEEECCH
Confidence 8999999999999999887 4 57999998864
No 479
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=87.96 E-value=0.35 Score=46.24 Aligned_cols=34 Identities=21% Similarity=0.476 Sum_probs=30.0
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCC-eEEEEcCCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSY-DVQVISPRN 91 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~-~V~vie~~~ 91 (515)
+++|.|||+|..|.+.|..|+..|+ +|+++|.+.
T Consensus 2 ~~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 2 RKKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 3689999999999999999998886 899999753
No 480
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=87.93 E-value=0.39 Score=46.04 Aligned_cols=34 Identities=32% Similarity=0.495 Sum_probs=30.9
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCC-eEEEEcCC
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSY-DVQVISPR 90 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~-~V~vie~~ 90 (515)
..++|.|||+|.-|.++|..|+..|+ +|+++|..
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 35799999999999999999998888 99999976
No 481
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=87.86 E-value=0.34 Score=47.20 Aligned_cols=32 Identities=28% Similarity=0.282 Sum_probs=30.0
Q ss_pred CeEEEECCcHHHHHHHHhccCCCCeEEEEcCC
Q 010217 59 KKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (515)
Q Consensus 59 ~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~ 90 (515)
++|.|||+|.-|...|..|.+.|++|++++++
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 68999999999999999999999999999875
No 482
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=87.81 E-value=0.33 Score=46.68 Aligned_cols=34 Identities=18% Similarity=0.387 Sum_probs=31.0
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~ 91 (515)
.++|.|||+|.-|.+.|..|+..|++|+++|+++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4789999999999999999999999999999874
No 483
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=87.64 E-value=0.44 Score=50.88 Aligned_cols=36 Identities=36% Similarity=0.658 Sum_probs=31.2
Q ss_pred ccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEecccc
Q 010217 222 RILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADH 271 (515)
Q Consensus 222 ~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~ 271 (515)
..++|+|||+|++|+.+|..|.+. |.+|+++++.++
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~--------------g~~v~~~e~~~~ 141 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSF--------------GMDVTLLEARDR 141 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHT--------------TCEEEEECSSSS
T ss_pred CCCeEEEECcCHHHHHHHHHHHHC--------------CCeEEEEecCCC
Confidence 567999999999999999999874 689999987654
No 484
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=87.57 E-value=0.33 Score=43.69 Aligned_cols=33 Identities=30% Similarity=0.318 Sum_probs=29.7
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCCeEEEEcCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~ 90 (515)
.++|.|||+|.-|.+.|..|...|++|++++++
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~ 60 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGFKVVVGSRN 60 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 468999999999999999999889999999875
No 485
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=87.55 E-value=0.38 Score=44.25 Aligned_cols=36 Identities=25% Similarity=0.362 Sum_probs=31.7
Q ss_pred CCCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCC
Q 010217 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (515)
Q Consensus 56 ~~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~ 91 (515)
...++|.|||+|.-|.+.|..|.+.|++|+++++++
T Consensus 17 ~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 456899999999999999999999999999999764
No 486
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=87.54 E-value=0.47 Score=42.35 Aligned_cols=32 Identities=31% Similarity=0.386 Sum_probs=29.5
Q ss_pred CeEEEEC-CcHHHHHHHHhccCCCCeEEEEcCC
Q 010217 59 KKVVVLG-TGWAGTSFLKNLNNPSYDVQVISPR 90 (515)
Q Consensus 59 ~~VvIIG-gG~AGlsaA~~L~~~g~~V~vie~~ 90 (515)
++|+||| +|..|.+.|..|.+.|++|++++++
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3799999 9999999999999999999999875
No 487
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=87.48 E-value=0.34 Score=45.47 Aligned_cols=35 Identities=17% Similarity=0.247 Sum_probs=31.6
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCC-eEEEEcCCC
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSY-DVQVISPRN 91 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~-~V~vie~~~ 91 (515)
..++++|||+|-+|-++|..|...|+ +|+|+++..
T Consensus 116 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 116 EDAYILILGAGGASKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 36799999999999999999999998 899998774
No 488
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=87.40 E-value=0.47 Score=52.04 Aligned_cols=36 Identities=36% Similarity=0.658 Sum_probs=31.2
Q ss_pred ccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEecccc
Q 010217 222 RILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADH 271 (515)
Q Consensus 222 ~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~ 271 (515)
..++|+|||+|++|+.+|..|.+. |.+|+|+++.++
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~--------------g~~v~v~E~~~~ 312 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSF--------------GMDVTLLEARDR 312 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--------------TCEEEEECSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC--------------CCcEEEEEecCc
Confidence 467999999999999999999885 688999987654
No 489
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=87.40 E-value=0.48 Score=42.61 Aligned_cols=34 Identities=26% Similarity=0.603 Sum_probs=31.0
Q ss_pred CCeEEEECC-cHHHHHHHHhccCCCCeEEEEcCCC
Q 010217 58 KKKVVVLGT-GWAGTSFLKNLNNPSYDVQVISPRN 91 (515)
Q Consensus 58 ~~~VvIIGg-G~AGlsaA~~L~~~g~~V~vie~~~ 91 (515)
+++|+|.|| |.-|...+..|...|++|+++++.+
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCc
Confidence 478999995 9999999999999999999999874
No 490
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=87.39 E-value=0.37 Score=45.49 Aligned_cols=33 Identities=24% Similarity=0.378 Sum_probs=30.6
Q ss_pred CeEEEECCcHHHHHHHHhccCCCCeEEEEcCCC
Q 010217 59 KKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (515)
Q Consensus 59 ~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~ 91 (515)
++|.|||.|.-|...|..|.+.|++|+++++++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 689999999999999999999999999999763
No 491
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=87.37 E-value=0.48 Score=47.19 Aligned_cols=32 Identities=25% Similarity=0.359 Sum_probs=29.3
Q ss_pred CeEEEECCcHHHHHHHHhccCCCCeEEEEcCCC
Q 010217 59 KKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (515)
Q Consensus 59 ~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~ 91 (515)
++|.|||.|.-|+..|..|++ |++|+++++++
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 379999999999999999999 99999999763
No 492
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=87.33 E-value=0.23 Score=47.54 Aligned_cols=33 Identities=24% Similarity=0.288 Sum_probs=29.6
Q ss_pred CCCeEEEECCcHHHHHHHHhccCC-----C-CeEEEEcC
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNP-----S-YDVQVISP 89 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~-----g-~~V~vie~ 89 (515)
++++|.|||+|.-|...|..|.+. | ++|+++++
T Consensus 7 ~~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 7 QPIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 346899999999999999999987 8 99999986
No 493
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=87.30 E-value=0.46 Score=45.69 Aligned_cols=34 Identities=24% Similarity=0.381 Sum_probs=30.3
Q ss_pred CCeEEEECCcHHHHHHHHhccCCCC-eEEEEcCCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNPSY-DVQVISPRN 91 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~g~-~V~vie~~~ 91 (515)
.++|.|||+|..|.+.|..|+..|+ +|+++|.+.
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 4689999999999999999998888 899999763
No 494
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=87.27 E-value=0.39 Score=48.87 Aligned_cols=35 Identities=23% Similarity=0.328 Sum_probs=32.2
Q ss_pred CCeEEEECCcHHHHHHHHhccCC-CC-eEEEEcCCCC
Q 010217 58 KKKVVVLGTGWAGTSFLKNLNNP-SY-DVQVISPRNY 92 (515)
Q Consensus 58 ~~~VvIIGgG~AGlsaA~~L~~~-g~-~V~vie~~~~ 92 (515)
.++|.|||+|.-|+..|..|+.. |+ +|+++|.++.
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 46899999999999999999998 99 9999998754
No 495
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=87.27 E-value=0.5 Score=45.11 Aligned_cols=34 Identities=24% Similarity=0.219 Sum_probs=31.4
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCC
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~ 90 (515)
+.++|.|||.|.-|...|..|.+.|++|++++++
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~ 41 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRS 41 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4578999999999999999999999999999876
No 496
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=87.27 E-value=0.4 Score=47.72 Aligned_cols=37 Identities=24% Similarity=0.375 Sum_probs=31.3
Q ss_pred ceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEecccccc
Q 010217 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL 273 (515)
Q Consensus 224 ~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~~l 273 (515)
.+|+|||+|.+|+-+|..|.+. .|.+|+|+++++++.
T Consensus 8 ~~v~IiGaG~~Gl~aA~~L~~~-------------~g~~v~v~E~~~~~G 44 (399)
T 1v0j_A 8 FDLFVVGSGFFGLTIAERVATQ-------------LDKRVLVLERRPHIG 44 (399)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-------------SCCCEEEECSSSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHh-------------CCCCEEEEeCCCCCC
Confidence 3899999999999999999874 157999999887653
No 497
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=87.23 E-value=0.41 Score=44.73 Aligned_cols=35 Identities=23% Similarity=0.373 Sum_probs=30.5
Q ss_pred ccceEEEECCChhHHHHHHHHHHhhHHHHHhhCcccCCCcEEEEEeccc
Q 010217 222 RILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAAD 270 (515)
Q Consensus 222 ~~~~vvVvGgG~~g~E~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~ 270 (515)
++++|+|||||.+|...+..|.+. |++|+++.+..
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~--------------Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPT--------------GCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGG--------------TCEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhC--------------CCEEEEEcCCC
Confidence 567999999999999999999885 68999997653
No 498
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=87.21 E-value=0.52 Score=46.44 Aligned_cols=38 Identities=21% Similarity=0.246 Sum_probs=34.2
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCCCCCc
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFA 94 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~~~~~ 94 (515)
...+++|+|+|.-+.+.|.-+...|++|+|+|+++.+.
T Consensus 203 P~~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~~~ 240 (386)
T 2we8_A 203 PRPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPVFA 240 (386)
T ss_dssp CCCEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTTTS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchhhc
Confidence 35799999999999999999999999999999987653
No 499
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=87.19 E-value=0.29 Score=45.87 Aligned_cols=34 Identities=21% Similarity=0.319 Sum_probs=30.9
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCCeEEEEcCC
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~~V~vie~~ 90 (515)
..++++|+|+|-+|.++|..|...|.+|+|+++.
T Consensus 118 ~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~ 151 (272)
T 1p77_A 118 PNQHVLILGAGGATKGVLLPLLQAQQNIVLANRT 151 (272)
T ss_dssp TTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 3579999999999999999999889999999876
No 500
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=87.08 E-value=0.38 Score=46.31 Aligned_cols=34 Identities=29% Similarity=0.520 Sum_probs=30.0
Q ss_pred CCCeEEEECCcHHHHHHHHhccCCCC--eEEEEcCC
Q 010217 57 KKKKVVVLGTGWAGTSFLKNLNNPSY--DVQVISPR 90 (515)
Q Consensus 57 ~~~~VvIIGgG~AGlsaA~~L~~~g~--~V~vie~~ 90 (515)
..++|.|||+|..|.++|..|+..++ +++++|..
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 35799999999999999999987776 89999965
Done!