Query 010218
Match_columns 515
No_of_seqs 147 out of 320
Neff 5.6
Searched_HMMs 46136
Date Thu Mar 28 22:25:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010218.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010218hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF05761 5_nucleotid: 5' nucle 100.0 7E-147 1E-151 1169.5 27.2 440 28-500 1-448 (448)
2 KOG2470 Similar to IMP-GMP spe 100.0 3E-122 7E-127 926.6 22.4 443 12-499 38-495 (510)
3 TIGR02244 HAD-IG-Ncltidse HAD 100.0 3E-107 6E-112 840.0 28.3 337 28-367 1-342 (343)
4 KOG2469 IMP-GMP specific 5'-nu 100.0 1E-106 3E-111 830.6 23.6 413 19-471 7-424 (424)
5 TIGR02253 CTE7 HAD superfamily 99.1 8.3E-10 1.8E-14 106.4 11.6 106 207-349 91-196 (221)
6 TIGR01422 phosphonatase phosph 98.8 8.7E-08 1.9E-12 95.0 14.8 102 209-348 98-201 (253)
7 PLN03243 haloacid dehalogenase 98.8 1.3E-07 2.7E-12 95.5 14.0 101 210-348 109-209 (260)
8 PRK13288 pyrophosphatase PpaX; 98.7 2.6E-07 5.7E-12 89.1 13.8 102 209-348 81-182 (214)
9 PRK13478 phosphonoacetaldehyde 98.6 7E-07 1.5E-11 89.5 15.3 103 209-349 100-204 (267)
10 PRK10826 2-deoxyglucose-6-phos 98.6 1.2E-06 2.6E-11 85.1 15.9 104 209-350 91-194 (222)
11 TIGR03351 PhnX-like phosphonat 98.6 6.8E-07 1.5E-11 86.3 13.7 102 210-349 87-192 (220)
12 PLN02940 riboflavin kinase 98.6 1.2E-06 2.6E-11 93.1 15.6 102 210-348 93-194 (382)
13 PRK10725 fructose-1-P/6-phosph 98.5 4E-06 8.7E-11 78.7 15.1 93 216-347 93-185 (188)
14 PLN02575 haloacid dehalogenase 98.4 4.1E-06 8.9E-11 89.0 15.4 101 211-349 217-317 (381)
15 PRK13222 phosphoglycolate phos 98.4 6.5E-06 1.4E-10 79.3 15.0 102 209-348 92-193 (226)
16 PRK10563 6-phosphogluconate ph 98.3 1.3E-05 2.7E-10 77.7 14.4 96 208-348 86-186 (221)
17 PF13419 HAD_2: Haloacid dehal 98.3 8.5E-07 1.8E-11 80.4 5.7 104 206-347 73-176 (176)
18 TIGR01509 HAD-SF-IA-v3 haloaci 98.3 3.2E-06 6.9E-11 78.4 8.8 100 209-347 84-183 (183)
19 TIGR01428 HAD_type_II 2-haloal 98.2 2.3E-06 4.9E-11 81.5 7.0 102 210-349 92-193 (198)
20 PRK09456 ?-D-glucose-1-phospha 98.2 4.3E-06 9.3E-11 80.1 8.4 102 210-348 84-185 (199)
21 PRK13226 phosphoglycolate phos 98.1 6.8E-06 1.5E-10 80.7 7.9 103 208-348 93-195 (229)
22 TIGR01454 AHBA_synth_RP 3-amin 98.1 7.7E-06 1.7E-10 78.4 6.8 103 208-348 73-175 (205)
23 PLN02770 haloacid dehalogenase 98.0 1.3E-05 2.9E-10 79.8 7.6 102 209-348 107-208 (248)
24 COG0546 Gph Predicted phosphat 98.0 0.00011 2.5E-09 71.8 13.8 103 208-348 87-189 (220)
25 TIGR01449 PGP_bact 2-phosphogl 98.0 2.1E-05 4.5E-10 75.2 8.3 104 207-348 82-185 (213)
26 TIGR01662 HAD-SF-IIIA HAD-supe 98.0 1.2E-05 2.7E-10 71.7 6.2 101 206-349 21-132 (132)
27 TIGR02247 HAD-1A3-hyp Epoxide 97.9 3.9E-05 8.5E-10 73.7 9.2 101 209-349 93-197 (211)
28 TIGR02252 DREG-2 REG-2-like, H 97.9 1.2E-05 2.6E-10 76.7 5.5 99 210-346 105-203 (203)
29 PLN02919 haloacid dehalogenase 97.9 0.00022 4.9E-09 84.9 17.2 103 211-351 162-265 (1057)
30 PRK09449 dUMP phosphatase; Pro 97.9 1.8E-05 3.9E-10 76.6 6.7 103 209-349 94-197 (224)
31 PRK14988 GMP/IMP nucleotidase; 97.9 1.4E-05 2.9E-10 78.6 5.5 104 209-350 92-195 (224)
32 KOG3085 Predicted hydrolase (H 97.9 8.8E-05 1.9E-09 74.2 10.4 105 205-348 109-213 (237)
33 TIGR01990 bPGM beta-phosphoglu 97.9 2E-05 4.4E-10 73.5 5.3 98 210-347 87-184 (185)
34 TIGR02254 YjjG/YfnB HAD superf 97.8 3.8E-05 8.2E-10 73.8 6.4 103 209-349 96-199 (224)
35 TIGR01691 enolase-ppase 2,3-di 97.8 6.4E-05 1.4E-09 74.4 7.6 102 210-350 95-198 (220)
36 COG1011 Predicted hydrolase (H 97.8 5.6E-05 1.2E-09 72.8 6.8 106 208-351 97-202 (229)
37 TIGR02009 PGMB-YQAB-SF beta-ph 97.7 4.9E-05 1.1E-09 71.0 5.4 100 208-347 86-185 (185)
38 cd01427 HAD_like Haloacid deha 97.7 6.1E-05 1.3E-09 64.9 5.4 113 209-347 23-139 (139)
39 PLN02779 haloacid dehalogenase 97.7 8.1E-05 1.8E-09 76.0 6.5 105 209-349 143-247 (286)
40 TIGR01993 Pyr-5-nucltdase pyri 97.6 7.2E-05 1.6E-09 70.4 5.5 102 209-347 83-184 (184)
41 PRK13225 phosphoglycolate phos 97.6 0.00014 3E-09 74.1 7.7 100 209-349 141-240 (273)
42 PRK13223 phosphoglycolate phos 97.6 0.00019 4E-09 72.8 8.2 102 209-348 100-201 (272)
43 TIGR01668 YqeG_hyp_ppase HAD s 97.6 8.9E-05 1.9E-09 70.0 5.3 95 211-351 44-139 (170)
44 PLN02811 hydrolase 97.6 0.00016 3.6E-09 70.3 7.0 101 212-348 80-184 (220)
45 PRK11587 putative phosphatase; 97.5 0.00031 6.7E-09 68.2 8.0 97 209-348 82-182 (218)
46 PRK10748 flavin mononucleotide 97.4 0.00019 4.1E-09 71.0 5.6 98 209-349 112-209 (238)
47 TIGR01685 MDP-1 magnesium-depe 97.4 0.00026 5.6E-09 67.7 6.1 110 211-349 46-158 (174)
48 TIGR01261 hisB_Nterm histidino 97.3 0.00037 8.1E-09 65.6 5.9 107 208-349 27-148 (161)
49 PRK06769 hypothetical protein; 97.2 0.0004 8.6E-09 65.8 4.9 96 211-349 29-138 (173)
50 TIGR01656 Histidinol-ppas hist 97.2 0.0006 1.3E-08 62.6 5.8 104 210-348 27-145 (147)
51 COG2179 Predicted hydrolase of 97.2 0.00054 1.2E-08 65.0 5.1 93 212-351 48-141 (175)
52 TIGR01549 HAD-SF-IA-v1 haloaci 97.1 0.00064 1.4E-08 61.8 5.1 86 213-338 67-152 (154)
53 PRK08942 D,D-heptose 1,7-bisph 97.0 0.0012 2.6E-08 62.4 5.8 108 211-349 30-148 (181)
54 PRK06698 bifunctional 5'-methy 96.9 0.0019 4.1E-08 70.2 7.4 99 210-349 330-428 (459)
55 TIGR01681 HAD-SF-IIIC HAD-supe 96.9 0.00075 1.6E-08 60.8 3.4 85 212-331 31-120 (128)
56 TIGR01548 HAD-SF-IA-hyp1 haloa 96.9 0.0018 3.9E-08 61.8 5.8 85 216-338 112-196 (197)
57 PRK05446 imidazole glycerol-ph 96.8 0.0028 6.1E-08 67.1 6.9 110 209-349 29-149 (354)
58 TIGR00213 GmhB_yaeD D,D-heptos 96.7 0.0037 8E-08 59.0 6.1 113 211-348 27-150 (176)
59 TIGR01664 DNA-3'-Pase DNA 3'-p 96.6 0.0036 7.9E-08 59.1 5.9 103 204-345 36-159 (166)
60 PRK11133 serB phosphoserine ph 96.5 0.075 1.6E-06 55.6 15.0 106 209-345 180-288 (322)
61 TIGR01458 HAD-SF-IIA-hyp3 HAD- 96.4 0.00093 2E-08 67.2 0.7 101 214-349 124-225 (257)
62 TIGR01491 HAD-SF-IB-PSPlk HAD- 96.4 0.015 3.3E-07 54.7 8.4 109 210-346 80-188 (201)
63 smart00577 CPDc catalytic doma 96.0 0.015 3.2E-07 53.6 6.3 86 207-336 42-131 (148)
64 KOG3109 Haloacid dehalogenase- 95.8 0.011 2.5E-07 58.5 4.8 113 205-351 95-208 (244)
65 TIGR00338 serB phosphoserine p 95.7 0.06 1.3E-06 51.9 9.3 106 209-345 84-192 (219)
66 TIGR01452 PGP_euk phosphoglyco 95.6 0.0035 7.5E-08 63.6 0.5 100 214-348 147-247 (279)
67 COG0637 Predicted phosphatase/ 95.3 0.12 2.7E-06 50.8 10.1 102 210-349 86-187 (221)
68 TIGR01672 AphA HAD superfamily 95.3 0.035 7.6E-07 55.7 6.3 107 196-347 100-210 (237)
69 PF09419 PGP_phosphatase: Mito 95.1 0.066 1.4E-06 51.2 7.1 89 212-347 61-163 (168)
70 COG0647 NagD Predicted sugar p 95.1 0.087 1.9E-06 53.9 8.4 36 314-350 202-237 (269)
71 TIGR01489 DKMTPPase-SF 2,3-dik 95.0 0.14 3.1E-06 47.5 8.9 51 209-268 71-121 (188)
72 PRK09552 mtnX 2-hydroxy-3-keto 94.9 0.08 1.7E-06 51.5 7.5 109 209-342 73-181 (219)
73 TIGR01686 FkbH FkbH-like domai 94.8 0.033 7.1E-07 57.8 4.6 87 212-339 33-122 (320)
74 TIGR01493 HAD-SF-IA-v2 Haloaci 94.8 0.013 2.7E-07 54.4 1.4 84 211-338 91-174 (175)
75 PF00702 Hydrolase: haloacid d 94.6 0.042 9E-07 51.9 4.4 82 212-337 129-212 (215)
76 PHA02597 30.2 hypothetical pro 94.5 0.078 1.7E-06 50.4 6.0 101 209-350 73-176 (197)
77 TIGR01459 HAD-SF-IIA-hyp4 HAD- 94.3 0.018 3.9E-07 57.0 1.2 99 213-347 141-240 (242)
78 KOG2469 IMP-GMP specific 5'-nu 94.2 0.00048 1E-08 73.1 -10.6 239 23-289 38-290 (424)
79 TIGR02726 phenyl_P_delta pheny 94.0 0.053 1.2E-06 51.6 3.6 110 187-346 13-123 (169)
80 PLN02954 phosphoserine phospha 93.7 0.32 6.9E-06 47.0 8.6 37 211-247 85-121 (224)
81 TIGR01670 YrbI-phosphatas 3-de 93.0 0.1 2.2E-06 48.5 3.7 83 218-348 36-118 (154)
82 PF13242 Hydrolase_like: HAD-h 93.0 0.084 1.8E-06 42.9 2.8 42 309-351 11-52 (75)
83 TIGR01490 HAD-SF-IB-hyp1 HAD-s 92.0 0.27 5.9E-06 46.6 5.4 106 212-349 89-198 (202)
84 TIGR03333 salvage_mtnX 2-hydro 92.0 1 2.2E-05 43.6 9.5 68 175-247 40-107 (214)
85 TIGR01684 viral_ppase viral ph 91.2 0.29 6.3E-06 50.8 4.9 70 192-275 132-202 (301)
86 PHA02530 pseT polynucleotide k 90.9 0.22 4.8E-06 50.5 3.7 105 212-347 189-295 (300)
87 PHA03398 viral phosphatase sup 90.9 0.34 7.4E-06 50.3 5.1 69 193-275 135-204 (303)
88 PRK08238 hypothetical protein; 90.1 0.69 1.5E-05 51.1 6.9 46 212-269 74-119 (479)
89 TIGR01488 HAD-SF-IB Haloacid D 90.0 2.4 5.2E-05 39.0 9.5 39 209-247 72-110 (177)
90 TIGR01663 PNK-3'Pase polynucle 89.5 0.59 1.3E-05 52.2 5.8 36 202-237 189-224 (526)
91 PRK09484 3-deoxy-D-manno-octul 89.3 0.3 6.4E-06 46.6 2.9 81 217-344 55-135 (183)
92 TIGR01457 HAD-SF-IIA-hyp2 HAD- 89.3 0.31 6.7E-06 48.8 3.2 38 310-348 186-223 (249)
93 PRK13582 thrH phosphoserine ph 88.8 1.8 4E-05 41.0 8.0 37 210-247 68-104 (205)
94 PRK11590 hypothetical protein; 88.1 1.8 4E-05 41.9 7.6 95 210-334 95-190 (211)
95 PTZ00445 p36-lilke protein; Pr 87.4 0.67 1.4E-05 46.1 4.0 139 189-348 55-205 (219)
96 TIGR01459 HAD-SF-IIA-hyp4 HAD- 86.6 0.78 1.7E-05 45.4 4.1 50 211-269 25-77 (242)
97 TIGR02251 HIF-SF_euk Dullard-l 86.5 0.91 2E-05 42.6 4.3 55 204-267 36-90 (162)
98 PRK11009 aphA acid phosphatase 86.0 1.6 3.5E-05 43.9 6.1 106 196-347 100-210 (237)
99 PLN02645 phosphoglycolate phos 85.6 0.63 1.4E-05 48.2 3.0 37 311-348 239-275 (311)
100 PF06888 Put_Phosphatase: Puta 84.0 3.3 7.1E-05 41.7 7.1 114 210-346 71-195 (234)
101 TIGR01460 HAD-SF-IIA Haloacid 83.4 0.91 2E-05 45.0 2.9 38 310-348 196-234 (236)
102 TIGR01456 CECR5 HAD-superfamil 82.9 0.72 1.6E-05 48.0 2.0 28 320-348 264-291 (321)
103 PRK03669 mannosyl-3-phosphogly 82.1 1.3 2.9E-05 44.4 3.6 41 34-76 2-42 (271)
104 PRK10444 UMP phosphatase; Prov 81.9 1.2 2.6E-05 44.8 3.1 38 310-348 182-219 (248)
105 PRK10530 pyridoxal phosphate ( 81.6 2.3 5E-05 42.1 5.0 33 308-342 204-236 (272)
106 TIGR01545 YfhB_g-proteo haloac 81.3 5.4 0.00012 39.0 7.4 94 211-334 95-189 (210)
107 TIGR02137 HSK-PSP phosphoserin 81.0 3.1 6.7E-05 40.6 5.6 37 210-247 68-104 (203)
108 TIGR01512 ATPase-IB2_Cd heavy 79.8 1.9 4.1E-05 48.1 4.1 36 212-247 364-400 (536)
109 TIGR01525 ATPase-IB_hvy heavy 79.6 1.4 3E-05 49.4 2.9 36 212-247 386-422 (556)
110 PF13344 Hydrolase_6: Haloacid 78.3 2.1 4.5E-05 37.2 3.0 37 211-247 15-51 (101)
111 PRK11587 putative phosphatase; 77.6 2.8 6.1E-05 40.6 4.1 35 38-77 2-36 (218)
112 TIGR02250 FCP1_euk FCP1-like p 77.0 3.7 8.1E-05 38.5 4.6 86 204-330 52-138 (156)
113 TIGR01544 HAD-SF-IE haloacid d 76.6 19 0.00041 37.2 10.0 105 209-339 120-230 (277)
114 PHA02597 30.2 hypothetical pro 76.0 2 4.4E-05 40.6 2.6 14 39-52 2-15 (197)
115 COG0561 Cof Predicted hydrolas 76.0 2.3 5E-05 42.3 3.1 38 38-77 2-39 (264)
116 TIGR01487 SPP-like sucrose-pho 75.5 2.7 5.9E-05 40.5 3.4 29 308-337 152-180 (215)
117 PRK10748 flavin mononucleotide 74.8 1.6 3.4E-05 43.2 1.5 21 35-55 6-26 (238)
118 PLN02779 haloacid dehalogenase 72.4 4 8.7E-05 41.7 3.9 36 37-76 38-73 (286)
119 PLN02770 haloacid dehalogenase 71.0 4.8 0.0001 40.0 4.0 36 36-76 19-54 (248)
120 PRK09449 dUMP phosphatase; Pro 69.8 4.1 8.9E-05 39.2 3.1 17 38-54 2-18 (224)
121 TIGR01662 HAD-SF-IIIA HAD-supe 66.9 3.5 7.5E-05 36.5 1.8 39 40-78 1-45 (132)
122 TIGR02254 YjjG/YfnB HAD superf 66.1 5.9 0.00013 37.8 3.3 18 39-56 1-18 (224)
123 TIGR01993 Pyr-5-nucltdase pyri 65.8 8 0.00017 36.2 4.1 14 40-53 1-14 (184)
124 COG0560 SerB Phosphoserine pho 65.1 20 0.00043 35.3 6.9 41 207-247 74-114 (212)
125 PF05152 DUF705: Protein of un 63.9 11 0.00023 39.3 4.8 68 202-278 134-201 (297)
126 PRK14988 GMP/IMP nucleotidase; 63.0 4.2 9E-05 39.9 1.7 20 34-53 5-24 (224)
127 PRK10513 sugar phosphate phosp 62.9 7.1 0.00015 38.8 3.4 37 38-76 2-38 (270)
128 PRK13226 phosphoglycolate phos 62.6 8.9 0.00019 37.5 3.9 35 38-77 11-45 (229)
129 TIGR01511 ATPase-IB1_Cu copper 62.5 9.4 0.0002 43.0 4.5 35 213-247 408-442 (562)
130 PRK01158 phosphoglycolate phos 62.4 7.6 0.00017 37.4 3.4 35 307-343 161-195 (230)
131 TIGR01689 EcbF-BcbF capsule bi 61.9 5.9 0.00013 36.1 2.3 15 40-54 2-16 (126)
132 TIGR01548 HAD-SF-IA-hyp1 haloa 61.9 7.9 0.00017 36.7 3.3 32 40-76 1-32 (197)
133 TIGR01664 DNA-3'-Pase DNA 3'-p 61.5 5.4 0.00012 37.6 2.1 41 38-78 12-62 (166)
134 TIGR02252 DREG-2 REG-2-like, H 61.4 9.3 0.0002 36.1 3.7 32 40-76 1-32 (203)
135 TIGR01684 viral_ppase viral ph 60.9 8.1 0.00017 40.4 3.3 49 32-81 119-169 (301)
136 PRK13225 phosphoglycolate phos 60.1 9.9 0.00021 38.8 3.9 34 38-76 61-94 (273)
137 COG0731 Fe-S oxidoreductases [ 60.0 7.3 0.00016 40.6 2.9 81 147-237 31-120 (296)
138 PF08645 PNK3P: Polynucleotide 58.7 5.3 0.00012 37.5 1.5 33 203-235 22-54 (159)
139 TIGR02009 PGMB-YQAB-SF beta-ph 58.6 12 0.00027 34.5 3.9 16 39-54 1-16 (185)
140 PTZ00174 phosphomannomutase; P 58.5 11 0.00024 37.4 3.9 37 38-76 4-40 (247)
141 PRK00192 mannosyl-3-phosphogly 58.3 10 0.00022 38.2 3.5 36 308-345 195-231 (273)
142 PRK10976 putative hydrolase; P 57.6 11 0.00023 37.5 3.5 36 39-76 2-37 (266)
143 PF08645 PNK3P: Polynucleotide 56.2 9.4 0.0002 35.8 2.7 11 318-328 117-127 (159)
144 TIGR01670 YrbI-phosphatas 3-de 56.1 12 0.00027 34.5 3.5 40 39-78 1-48 (154)
145 TIGR02461 osmo_MPG_phos mannos 55.4 10 0.00022 37.4 3.0 34 41-77 1-34 (225)
146 TIGR00338 serB phosphoserine p 54.6 6.8 0.00015 37.6 1.5 19 36-54 11-29 (219)
147 PRK15126 thiamin pyrimidine py 53.5 11 0.00024 37.6 2.9 21 308-328 193-213 (272)
148 PF11019 DUF2608: Protein of u 53.1 33 0.00072 34.7 6.3 110 203-329 74-188 (252)
149 PLN02954 phosphoserine phospha 53.1 7.4 0.00016 37.4 1.5 25 320-346 170-194 (224)
150 cd01427 HAD_like Haloacid deha 52.8 11 0.00025 31.7 2.5 15 41-55 1-15 (139)
151 TIGR01689 EcbF-BcbF capsule bi 52.6 15 0.00032 33.5 3.3 101 191-319 6-123 (126)
152 PRK13582 thrH phosphoserine ph 52.3 9.2 0.0002 36.2 2.0 22 314-336 139-160 (205)
153 PRK13223 phosphoglycolate phos 52.1 17 0.00037 36.8 4.0 34 38-76 12-45 (272)
154 TIGR01449 PGP_bact 2-phosphogl 51.9 13 0.00028 35.2 3.0 30 42-76 1-30 (213)
155 PHA03398 viral phosphatase sup 51.7 14 0.0003 38.7 3.3 49 33-82 122-172 (303)
156 TIGR02463 MPGP_rel mannosyl-3- 51.6 15 0.00033 35.3 3.4 26 308-334 184-209 (221)
157 PLN02645 phosphoglycolate phos 51.3 15 0.00032 38.1 3.4 65 191-269 33-97 (311)
158 smart00775 LNS2 LNS2 domain. T 50.6 12 0.00026 35.0 2.5 14 41-54 1-14 (157)
159 TIGR01452 PGP_euk phosphoglyco 50.3 14 0.0003 37.4 3.1 37 38-77 1-37 (279)
160 TIGR01482 SPP-subfamily Sucros 49.5 11 0.00024 36.1 2.1 33 42-76 1-33 (225)
161 TIGR02247 HAD-1A3-hyp Epoxide 49.4 13 0.00029 35.4 2.6 16 39-54 2-17 (211)
162 COG1011 Predicted hydrolase (H 48.2 16 0.00035 34.8 3.0 23 36-58 1-23 (229)
163 PRK11590 hypothetical protein; 48.2 13 0.00028 36.0 2.4 13 39-51 6-18 (211)
164 TIGR01990 bPGM beta-phosphoglu 47.0 20 0.00042 33.1 3.3 31 41-76 1-31 (185)
165 TIGR01681 HAD-SF-IIIC HAD-supe 46.8 20 0.00044 32.0 3.3 14 40-53 1-14 (128)
166 TIGR01428 HAD_type_II 2-haloal 44.5 12 0.00026 35.3 1.4 17 39-55 1-17 (198)
167 TIGR01458 HAD-SF-IIA-hyp3 HAD- 42.7 21 0.00046 35.9 3.0 27 212-238 23-49 (257)
168 PLN02887 hydrolase family prot 42.2 26 0.00056 39.9 3.9 37 38-76 307-343 (580)
169 TIGR01491 HAD-SF-IB-PSPlk HAD- 41.5 14 0.0003 34.5 1.4 17 39-55 4-20 (201)
170 PF08282 Hydrolase_3: haloacid 41.1 24 0.00053 33.4 3.0 59 42-102 1-75 (254)
171 TIGR00213 GmhB_yaeD D,D-heptos 40.8 27 0.00059 32.7 3.2 40 40-79 2-47 (176)
172 KOG2961 Predicted hydrolase (H 39.8 24 0.00051 33.8 2.5 44 305-349 121-168 (190)
173 PRK08883 ribulose-phosphate 3- 38.8 24 0.00051 35.1 2.6 128 179-331 47-200 (220)
174 PF00834 Ribul_P_3_epim: Ribul 38.6 61 0.0013 31.8 5.4 51 213-276 92-142 (201)
175 PLN02423 phosphomannomutase 37.8 35 0.00076 34.1 3.6 19 37-55 4-23 (245)
176 PF03031 NIF: NLI interacting 37.7 41 0.00089 30.7 3.8 52 206-266 32-83 (159)
177 PF06941 NT5C: 5' nucleotidase 37.6 16 0.00036 34.7 1.2 28 211-238 74-101 (191)
178 PF12689 Acid_PPase: Acid Phos 37.2 17 0.00037 34.8 1.3 11 40-50 4-14 (169)
179 PRK12702 mannosyl-3-phosphogly 36.9 36 0.00078 35.7 3.6 37 39-77 1-37 (302)
180 PF12710 HAD: haloacid dehalog 36.9 25 0.00053 32.5 2.3 35 213-247 92-126 (192)
181 TIGR01672 AphA HAD superfamily 35.9 18 0.0004 36.4 1.3 13 41-53 65-77 (237)
182 PRK06769 hypothetical protein; 35.8 28 0.00061 32.7 2.5 46 36-81 1-51 (173)
183 TIGR01509 HAD-SF-IA-v3 haloaci 35.8 13 0.00029 33.9 0.3 16 41-56 1-16 (183)
184 COG4850 Uncharacterized conser 35.4 40 0.00087 35.8 3.7 57 213-269 199-260 (373)
185 smart00775 LNS2 LNS2 domain. T 35.3 32 0.00069 32.1 2.7 37 212-248 29-65 (157)
186 PF00702 Hydrolase: haloacid d 35.2 19 0.00041 33.7 1.2 18 39-56 1-18 (215)
187 PRK10444 UMP phosphatase; Prov 34.4 34 0.00073 34.4 2.9 37 211-247 18-54 (248)
188 TIGR01457 HAD-SF-IIA-hyp2 HAD- 33.9 41 0.00088 33.6 3.4 51 213-269 20-70 (249)
189 TIGR01493 HAD-SF-IA-v2 Haloaci 32.6 19 0.00041 33.1 0.7 14 41-54 1-14 (175)
190 TIGR00099 Cof-subfamily Cof su 32.5 40 0.00087 33.2 3.1 34 41-76 1-34 (256)
191 PRK08745 ribulose-phosphate 3- 31.7 38 0.00082 33.8 2.7 128 180-331 52-204 (223)
192 TIGR01486 HAD-SF-IIB-MPGP mann 30.6 47 0.001 32.9 3.2 29 308-337 181-211 (256)
193 PRK14502 bifunctional mannosyl 30.4 74 0.0016 37.1 5.0 44 32-77 409-452 (694)
194 PRK08942 D,D-heptose 1,7-bisph 30.4 42 0.00092 31.4 2.7 40 38-78 2-49 (181)
195 cd06280 PBP1_LacI_like_4 Ligan 29.9 99 0.0021 29.9 5.3 25 24-48 172-211 (263)
196 TIGR01261 hisB_Nterm histidino 29.5 58 0.0012 30.6 3.4 40 40-79 2-50 (161)
197 TIGR01454 AHBA_synth_RP 3-amin 28.6 22 0.00047 33.8 0.4 12 42-53 1-12 (205)
198 TIGR00685 T6PP trehalose-phosp 28.1 29 0.00062 34.4 1.2 39 309-348 173-217 (244)
199 TIGR01522 ATPase-IIA2_Ca golgi 27.8 46 0.001 39.7 3.0 95 213-330 531-628 (884)
200 PF02358 Trehalose_PPase: Treh 27.4 40 0.00086 33.1 2.0 28 44-71 2-29 (235)
201 PF08444 Gly_acyl_tr_C: Aralky 27.1 58 0.0013 28.2 2.7 32 46-77 24-55 (89)
202 PRK10671 copA copper exporting 27.1 52 0.0011 38.9 3.3 35 213-247 653-687 (834)
203 TIGR01656 Histidinol-ppas hist 27.0 53 0.0011 29.8 2.7 39 40-78 1-47 (147)
204 TIGR01663 PNK-3'Pase polynucle 27.0 40 0.00088 37.9 2.2 41 37-78 166-217 (526)
205 TIGR01668 YqeG_hyp_ppase HAD s 26.8 66 0.0014 30.1 3.4 49 28-79 15-64 (170)
206 COG0241 HisB Histidinol phosph 26.7 51 0.0011 32.0 2.6 38 193-234 12-55 (181)
207 KOG2882 p-Nitrophenyl phosphat 26.3 53 0.0012 34.5 2.8 56 302-358 220-279 (306)
208 TIGR01484 HAD-SF-IIB HAD-super 24.9 68 0.0015 30.3 3.1 32 42-74 2-33 (204)
209 TIGR02137 HSK-PSP phosphoserin 24.8 28 0.00061 33.9 0.4 12 41-52 3-14 (203)
210 TIGR02417 fruct_sucro_rep D-fr 24.6 72 0.0015 32.2 3.4 66 24-90 238-327 (327)
211 KOG3109 Haloacid dehalogenase- 24.6 95 0.0021 31.5 4.0 54 38-92 14-75 (244)
212 PRK09484 3-deoxy-D-manno-octul 24.3 39 0.00086 32.0 1.3 18 36-53 18-35 (183)
213 COG0560 SerB Phosphoserine pho 23.8 53 0.0012 32.3 2.2 15 38-52 4-18 (212)
214 PF10146 zf-C4H2: Zinc finger- 23.5 6.5E+02 0.014 25.4 9.8 13 347-359 33-45 (230)
215 TIGR01533 lipo_e_P4 5'-nucleot 23.4 74 0.0016 32.7 3.2 37 211-247 119-155 (266)
216 COG4359 Uncharacterized conser 23.3 7.6E+02 0.016 24.7 10.1 59 188-249 54-112 (220)
217 PF07058 Myosin_HC-like: Myosi 23.0 5.1E+02 0.011 27.5 9.0 40 348-387 44-87 (351)
218 PRK09552 mtnX 2-hydroxy-3-keto 22.8 43 0.00093 32.4 1.3 15 41-55 5-19 (219)
219 cd06270 PBP1_GalS_like Ligand 22.4 2.3E+02 0.0049 27.4 6.3 24 24-47 177-215 (268)
220 COG4308 LimA Limonene-1,2-epox 22.1 23 0.0005 32.4 -0.7 9 256-264 111-119 (130)
221 PRK06698 bifunctional 5'-methy 21.9 37 0.0008 37.1 0.7 16 39-54 241-256 (459)
222 PF13304 AAA_21: AAA domain; P 21.8 27 0.00059 32.3 -0.3 37 201-237 262-300 (303)
223 KOG3284 Vacuolar sorting prote 21.6 3.2E+02 0.007 27.0 6.8 16 348-363 5-20 (213)
224 TIGR01460 HAD-SF-IIA Haloacid 21.0 85 0.0018 31.0 3.0 35 213-247 17-51 (236)
225 PTZ00445 p36-lilke protein; Pr 20.8 47 0.001 33.3 1.1 58 25-84 30-101 (219)
226 KOG1372 GDP-mannose 4,6 dehydr 20.7 42 0.00092 34.6 0.8 31 327-357 334-364 (376)
227 KOG3120 Predicted haloacid deh 20.6 6.2E+02 0.013 25.9 8.8 126 196-346 75-208 (256)
No 1
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=100.00 E-value=6.9e-147 Score=1169.51 Aligned_cols=440 Identities=43% Similarity=0.700 Sum_probs=353.3
Q ss_pred eEecCccccCCCcEEEEecccceeccCccchHHHHHHHHHHHHHh-cCCCCCC--CCCCccccccceEeecCCCcEEeec
Q 010218 28 IFCSRTLNLRSISAIGYDMDYTLMHYNVMAWEGRAYDYCMVNLRN-MGFPVEG--LAFDPDLVIRGLVIDKEKGNLVKAD 104 (515)
Q Consensus 28 VF~nr~l~L~~i~~iGFDmDyTLa~Y~~~~~e~L~y~~~~~~Lv~-~gYP~~~--l~ydp~F~iRGL~~D~~~GnlLKvD 104 (515)
|||||+|+|++|+|||||||||||+|++++++.|+|++++++||+ +|||+++ ++|||+|+|||||+|+++|||||||
T Consensus 1 VF~Nr~l~l~~i~~iGFDmDyTLa~Y~~~~~~~L~y~~~~~~LV~~~gYP~~ll~~~~dp~F~iRGL~~D~~~GnlLKld 80 (448)
T PF05761_consen 1 VFVNRSLNLKDIDVIGFDMDYTLARYKSPELEELIYELARERLVEEKGYPEELLNLEYDPDFAIRGLVIDKERGNLLKLD 80 (448)
T ss_dssp -EESS-EECCC--EEEE-TBTTTBEE-CCHHHHHHHHHHHHHHHHHTT--GGGGG----CCC--TTEEEETTTTEEEEEB
T ss_pred CeeCCccccccCCEEEECcccchhhcCHHHHHHHHHHHHHHHHHhccCCCHHHhCCCCchhhhhcceeeEcccCeEEEEc
Confidence 899999999999999999999999999999999999999999996 9999985 5799999999999999999999999
Q ss_pred CCCcEEEEEecCccCCHHHHHHHhcCeeccccccccceechhhhchhHHHHHHHHHHHHh--hCCCCCCCCCCChHHHHH
Q 010218 105 RFGYVKRAMHGTTMLSNRAVSEMYGRELVDLRKESRWEFLNTLFSVSEAVAYMQMVNRLD--EGAIGPELGPLDYKGLYK 182 (515)
Q Consensus 105 ~~g~I~~a~hG~~~ls~~Ei~~~Y~~~~i~~~~~~r~~~l~tlFslpe~~L~a~lVd~~d--~~~~~~~~~~~~y~~l~~ 182 (515)
++|+|++|+||+++|+.+||+++||+++++.....+|.+++|+||+||+||||++||+|| ++.+ .++|..||+
T Consensus 81 ~~g~I~~a~hG~~~l~~eei~~~Y~~~~i~~~~~~~~~~l~tlFslpe~~L~a~lvd~~d~~~~~~-----~~~~~~l~~ 155 (448)
T PF05761_consen 81 RFGYILRAYHGFRPLSDEEIRELYGNKFIPLSDDSRFFQLNTLFSLPEAYLFAQLVDYFDVEDGNI-----EYDYRSLYQ 155 (448)
T ss_dssp TTSBEEEEEETTEEE-HHHHCCCCTTSB--TTSTTTEEEE-SCCHHHHHHHHHHHHHHHHECCTTC-----CEEHHHHHH
T ss_pred CCCcEEEEEeccccCCHHHHHHhcCCcccccchhhHHHHHhhHhhhhHHHHHHHHHHHhhcccCCC-----CCCHHHHHH
Confidence 999999999999999999999999999998876669999999999999999999999999 4443 588999999
Q ss_pred HHHHHHHhccchhhhHHHHHcCcccccccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCc
Q 010218 183 AVGKALFRAHVEGQLKSEIMSKPELFVEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLF 262 (515)
Q Consensus 183 dv~~av~~vH~~G~lk~~v~~np~kYi~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~F 262 (515)
||++||+.||.+|.||++|++||+|||+|+|++++||++||++||||||||||+|+|||++|+|++|..+++++|||+||
T Consensus 156 DV~~Avd~~H~~G~lk~~v~~dp~kYi~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlF 235 (448)
T PF05761_consen 156 DVRDAVDHVHRDGSLKREVKEDPEKYIHKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLF 235 (448)
T ss_dssp HHHHHHHHHHHCSCHHHHHHTTCCCCEE--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCE
T ss_pred HHHHHHHHHhcchHHHHHHHHCHHHHccCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhhe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999888899999999
Q ss_pred cEEEEccCCCCCCCCCCCeEEEeCCCCceecc---cccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccccc
Q 010218 263 NMVIVSARKPEFFQMSHPLYEVVTGEGLMRPC---FKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVH 339 (515)
Q Consensus 263 DvVIv~A~KP~FF~~~~pf~~v~~~~g~~~~~---~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~ 339 (515)
|+|||+|+||+||++++|||+|++++|++.+. ..+++|+||+|||+++|++++||+|++||||||||||||++||+.
T Consensus 236 DvVIv~A~KP~FF~~~~pfr~vd~~~g~l~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~ 315 (448)
T PF05761_consen 236 DVVIVDARKPGFFTEGRPFREVDTETGKLKWGKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKKR 315 (448)
T ss_dssp CEEEES--CCHHHCT---EEEEETTTSSEECS---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESSTTTTHHHHHHH
T ss_pred eEEEEcCCCCcccCCCCceEEEECCCCccccccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCchhhhhhhhccc
Confidence 99999999999999999999999999998754 478999999999999999999999999999999999999999999
Q ss_pred cCceEEeehHhhHHHHHHHHhhhHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhcCCCChhhhhcccCChHHHHHHHHHHH
Q 010218 340 LRWRTALICRELEEEYNALINSRGQRARLVELINQKEVVGDLFNQLRLSLQRRNRGHPAQTLAATNMDDQELTESMQKLL 419 (515)
Q Consensus 340 ~gWrT~aIVpELe~Ei~~~~~~~~~~~~l~~l~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (515)
+||||+|||||||+||++|++.+..+++|..|..+.+.+.+.+.+++ +.+.++
T Consensus 316 ~gWrT~~Ii~ELe~Ei~~~~~~~~~~~~l~~L~~~~~~~~~~~~~~~---------------------------~~~~~~ 368 (448)
T PF05761_consen 316 HGWRTAAIIPELEQEIEIWNSKKYRFEELQELEELLEELQDHLDQLR---------------------------SSSELR 368 (448)
T ss_dssp H-SEEEEE-TTHHHHHHHHHHTHHHHHHHHHHHHHCHHHHCHHHHHH---------------------------HHHHHH
T ss_pred cceEEEEEehhhhhhhhhhhhcchhhhHHHHHHHHHHHHHHHhcccc---------------------------cchhhH
Confidence 99999999999999999999888888787777544444333322211 122333
Q ss_pred HHHHHHHHhhhhhhhhhcccccCccccccccCCCCcChhhhhhhhhhhhhhccccccccCCCCcccccCCcCCCCCcccc
Q 010218 420 VVMQRLDQKIAPMLESDGELFNKRWGFLSRAGLWDKSHLMRQIEKYADIYTSRVSNFLHYTPFMYFRSQEQTLAHDSYSY 499 (515)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~Fn~~~GslfRtg~~~~S~Fa~qv~RyAdlYtS~v~NLl~Ysp~~~Fr~~~~~mpHE~~~~ 499 (515)
..+++++++++.+.+++++.|||+||||||||+ ++|+||+||+||||||||+|+|||+|||+++|||||++||||+++|
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~fn~~~GslfRtg~-~~s~Fa~qv~RyAdlYtS~v~Nll~y~~~~~Fr~~~~~lpHE~~~~ 447 (448)
T PF05761_consen 369 PDISELRKERRELRREMKELFNPQFGSLFRTGH-NPSYFARQVERYADLYTSSVSNLLNYSPNYYFRPPRDLLPHESTVW 447 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHCTT-TTT-BSSEETT-EEBHHHHHHHHH-SEEESSHHHHHHS-TT-EE-------CCG----
T ss_pred HHHHHHHHHHHHHHHHHhhhcccchHHHHhcCC-CccHHHHHHHHHhhhhhccccHHHhCCcceEEeCCCCCCCCCCCCC
Confidence 445556667777778889999999999999997 9999999999999999999999999999999999999999999987
Q ss_pred c
Q 010218 500 Y 500 (515)
Q Consensus 500 ~ 500 (515)
.
T Consensus 448 ~ 448 (448)
T PF05761_consen 448 H 448 (448)
T ss_dssp -
T ss_pred C
Confidence 3
No 2
>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=100.00 E-value=3.3e-122 Score=926.61 Aligned_cols=443 Identities=30% Similarity=0.501 Sum_probs=397.3
Q ss_pred hhCCCCCCCCCCCCCeeEecCccccCCCcEEEEecccceeccCccchHHHHHHHHHHHHH-hcCCCCCC--CCCCccccc
Q 010218 12 DFGIPSPSSARNSPRGIFCSRTLNLRSISAIGYDMDYTLMHYNVMAWEGRAYDYCMVNLR-NMGFPVEG--LAFDPDLVI 88 (515)
Q Consensus 12 ~~~~~~~~~~~~~~~~VF~nr~l~L~~i~~iGFDmDyTLa~Y~~~~~e~L~y~~~~~~Lv-~~gYP~~~--l~ydp~F~i 88 (515)
-+.+|+..++..+|++||+|++++|++|++||||||||||+|.+. +..|||+++++.|| ++.||+.+ ++|||+|+|
T Consensus 38 ~l~ip~~i~sllnp~aiy~nne~sl~dievygfdydytla~ys~h-lh~lif~~ard~lvn~frYPe~i~q~eYdPnFaI 116 (510)
T KOG2470|consen 38 FLNIPEAINSLLNPQAIYVNNELSLDDIEVYGFDYDYTLAHYSSH-LHSLIFDLARDHLVNEFRYPEVIRQYEYDPNFAI 116 (510)
T ss_pred ccCCCHHHHhccChhheeecCcccccceeEeccccchhHHHHHHH-HHHHHHHHHHHHHHHhccChHHhhhcccCCCccc
Confidence 345888888889999999999999999999999999999999865 89999999999998 69999876 579999999
Q ss_pred cceEeecCCCcEEeecCCCcEE--EEEecCccCCHHHHHHHhcCeeccccc-------cccceechhhhchhHHHHHHHH
Q 010218 89 RGLVIDKEKGNLVKADRFGYVK--RAMHGTTMLSNRAVSEMYGRELVDLRK-------ESRWEFLNTLFSVSEAVAYMQM 159 (515)
Q Consensus 89 RGL~~D~~~GnlLKvD~~g~I~--~a~hG~~~ls~~Ei~~~Y~~~~i~~~~-------~~r~~~l~tlFslpe~~L~a~l 159 (515)
|||++|+++|.|+|+|+||+|+ .||+|.++++++||.++||+.+|++.+ ++..++++|+||+||+||++|+
T Consensus 117 RGLhYDv~kglLmKlDaF~~iqlgt~YrGr~kv~~eEvi~mY~~rhipl~q~~g~~~k~~~mvqlmDiFs~pEmcLls~v 196 (510)
T KOG2470|consen 117 RGLHYDVQKGLLMKLDAFHYIQLGTVYRGRRKVPDEEVIEMYGGRHIPLDQMSGFYGKGSKMVQLMDIFSLPEMCLLSCV 196 (510)
T ss_pred chhhhHhhhhhheeeccceeeccCceeecCccCCHHHHHHHhcCCccCHHHhcCccCCCchHHHHHHHhccHHHHHHHHH
Confidence 9999999999999999999999 499999999999999999999998754 4558999999999999999999
Q ss_pred HHHHhhCCCCCCCCCCChHHHHHHHHHHHHhccchhhhHHHHHcCcccccccCCCchHHHHHHHHhCceEEEEcCCCchh
Q 010218 160 VNRLDEGAIGPELGPLDYKGLYKAVGKALFRAHVEGQLKSEIMSKPELFVEPDPELPLALLDQKEAGKKLLLITNSDYHY 239 (515)
Q Consensus 160 Vd~~d~~~~~~~~~~~~y~~l~~dv~~av~~vH~~G~lk~~v~~np~kYi~kd~~l~~~L~~lr~~GKklFLlTNS~~~y 239 (515)
|+||..+.+ .+++..+|+||++|+..||..|.+ +|.+|.+|||.++|++..+|.+|+++|||+||||||||.|
T Consensus 197 veYF~~~~l-----efd~~~ly~Dv~~ai~~vH~~~~~--~i~~~~ekyi~r~~ql~~fl~kL~~~GKklFLiTNSPysF 269 (510)
T KOG2470|consen 197 VEYFLDNKL-----EFDPSHLYKDVNDAIRDVHRKGHM--KIESDLEKYIERNPQLLAFLRKLKDHGKKLFLITNSPYSF 269 (510)
T ss_pred HHHHHhccc-----cCCHHHHHHhHHHHHHHhhhhhhH--HHhhchHHHhhccHHHHHHHHHHHHhcCcEEEEeCCchhh
Confidence 999998877 478999999999999999999998 7999999999999999999999999999999999999999
Q ss_pred hHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCC-CCCeEEEeCCCCce--ecccccCCCccccCCCHHHHHHHhC
Q 010218 240 TDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQM-SHPLYEVVTGEGLM--RPCFKARTGGLYSGGSAQMIENSLN 316 (515)
Q Consensus 240 t~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~-~~pf~~v~~~~g~~--~~~~~l~~g~vY~gGn~~~l~~ll~ 316 (515)
+|.+|+|++ |+|||++||||||+|+||.||++ .+|||..|..+|.+ ..+.++++|+||.+||+.+|.+++|
T Consensus 270 Vd~GM~flv------G~~WRdlFDVVIvqA~KP~Fftde~rPfR~~dek~~sl~wdkv~klekgkiYy~G~l~~flelt~ 343 (510)
T KOG2470|consen 270 VDKGMRFLV------GDDWRDLFDVVIVQANKPEFFTDERRPFRKYDEKRGSLLWDKVDKLEKGKIYYQGNLKSFLELTG 343 (510)
T ss_pred hhcCceeee------CccHHhhhheeEEecCCCcccccccCcchhhcccccchhhhhhhhcccCceeeeccHHHHHHHhc
Confidence 999999999 58999999999999999999996 56999999888875 4678899999999999999999999
Q ss_pred cCCCcEEEEcCccccchhccccccCceEEeehHhhHHHHHHHHhhhHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhcCCC
Q 010218 317 IHGDEILYVGDHIYTDVSQSKVHLRWRTALICRELEEEYNALINSRGQRARLVELINQKEVVGDLFNQLRLSLQRRNRGH 396 (515)
Q Consensus 317 ~~g~~VLY~GDHI~~Di~~skk~~gWrT~aIVpELe~Ei~~~~~~~~~~~~l~~l~~~~~~l~~~~~~l~~~~~~~~~~~ 396 (515)
|+|++|||||||+|||++++...+||||+|||||||+||++++ ..+++....|+..+..+|++.. . + .++
T Consensus 344 WrG~~VlYFGDHlySDLad~tlkhgWRTgAII~EL~~Eiki~N-~e~y~~s~~w~q~lt~Ller~q-~-----~---rse 413 (510)
T KOG2470|consen 344 WRGPRVLYFGDHLYSDLADLTLKHGWRTGAIIPELEREIKIQN-TEQYRFSQTWLQILTGLLERMQ-A-----Q---RSE 413 (510)
T ss_pred cCCCeeEEecCcchhhhhhhHhhcccccccchHHHHHHHhhcc-HHHHHHHHHHHHHHHHHHHHHH-h-----h---hhH
Confidence 9999999999999999999999999999999999999999985 5788888888865555555431 1 1 122
Q ss_pred ChhhhhcccCChHHHHHHHHHHHHHHHHHHHhhhhhhhhhcccccCccccccccCCCCcChhhhhhhhhhhhhhcccccc
Q 010218 397 PAQTLAATNMDDQELTESMQKLLVVMQRLDQKIAPMLESDGELFNKRWGFLSRAGLWDKSHLMRQIEKYADIYTSRVSNF 476 (515)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fn~~~GslfRtg~~~~S~Fa~qv~RyAdlYtS~v~NL 476 (515)
.+|+...+|+++ +++ +.+.+|++||.+|||+|||.+ +||||++++.||||||||+++||
T Consensus 414 asq~~L~ew~~e-------------Rq~-------lR~~tK~~FN~qFGs~FrT~~-nptyFsrrl~rfaDiYts~lsnl 472 (510)
T KOG2470|consen 414 ASQSVLDEWMKE-------------RQE-------LRDTTKQMFNAQFGSTFRTDH-NPTYFSRRLHRFADIYTSSLSNL 472 (510)
T ss_pred HHHHHHHHHHHH-------------HHH-------HHHHHHHHHHHhhcceeeccC-CccHHHHHHHHHHHHHhccHHHH
Confidence 233333222211 111 234568999999999999986 89999999999999999999999
Q ss_pred ccCCCCcccccCCcCCCCCcccc
Q 010218 477 LHYTPFMYFRSQEQTLAHDSYSY 499 (515)
Q Consensus 477 l~Ysp~~~Fr~~~~~mpHE~~~~ 499 (515)
|+|++.|+|+|+|+.||||.++|
T Consensus 473 L~y~~~htfYprr~~mpHe~~~~ 495 (510)
T KOG2470|consen 473 LNYRVEHTFYPRRTPMPHEVPVW 495 (510)
T ss_pred HhcCcccccCCcCCCCccccccc
Confidence 99999999999999999999999
No 3
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=100.00 E-value=2.8e-107 Score=839.98 Aligned_cols=337 Identities=44% Similarity=0.716 Sum_probs=317.3
Q ss_pred eEecCccccCCCcEEEEecccceeccCccchHHHHHHHHHHHHHh-cCCCCCC--CCCCccccccceEeecCCCcEEeec
Q 010218 28 IFCSRTLNLRSISAIGYDMDYTLMHYNVMAWEGRAYDYCMVNLRN-MGFPVEG--LAFDPDLVIRGLVIDKEKGNLVKAD 104 (515)
Q Consensus 28 VF~nr~l~L~~i~~iGFDmDyTLa~Y~~~~~e~L~y~~~~~~Lv~-~gYP~~~--l~ydp~F~iRGL~~D~~~GnlLKvD 104 (515)
|||||+|+|++|+|||||||||||+|+++++|.|||++++++||+ +|||+++ ++|||+|+||||++|+++|||||+|
T Consensus 1 if~nr~l~l~~i~~~GFDmDyTLa~Y~~~~~e~L~y~~~~~~LV~~~gYp~~l~~~~~d~~f~iRGL~~D~~~GnllKld 80 (343)
T TIGR02244 1 VFVNRELNLEKIQVFGFDMDYTLAQYKSPELEALIYDLAKERLVKRFGYPEELLSFAYDPTFAIRGLVFDKLKGNLLKLD 80 (343)
T ss_pred CeeCCccccccCCEEEECccccccccChHHHHHHHHHHHHHHHHHhcCCChHHhCCcCCCcccccceeeEcccCeEEEEc
Confidence 899999999999999999999999999999999999999999996 6999875 4799999999999999999999999
Q ss_pred CCCcEEEEEecCccCCHHHHHHHhcCeeccccccccceechhhhchhHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHH
Q 010218 105 RFGYVKRAMHGTTMLSNRAVSEMYGRELVDLRKESRWEFLNTLFSVSEAVAYMQMVNRLDEGAIGPELGPLDYKGLYKAV 184 (515)
Q Consensus 105 ~~g~I~~a~hG~~~ls~~Ei~~~Y~~~~i~~~~~~r~~~l~tlFslpe~~L~a~lVd~~d~~~~~~~~~~~~y~~l~~dv 184 (515)
++|+|++|+||+++||.+||.++||+++++..+.++|+++||+||+||||||||+||+||+... ++ ..++|.+||+||
T Consensus 81 ~~g~I~~~~hG~~~l~~~e~~~~Y~~~~~~~~~~~~~~~l~tlF~lpe~~L~a~lvd~~~~~~~-~~-~~~~~~~~~~dv 158 (343)
T TIGR02244 81 RFGNILRGYHGLRPLSDKEVQEIYGNKYISRSNGDRYYLLDTLFSLPEACLIAQLVDYFDDHPK-GP-LAFDYRQIYQDV 158 (343)
T ss_pred CCCcEEEEecCCccCCHHHHHHHcCccccCCCCCccEEEecccccchHHHHHHHHHHHHhcccc-CC-CCCCHHHHHHHH
Confidence 9999999999999999999999999999987766799999999999999999999999997742 11 257999999999
Q ss_pred HHHHHhccchhhhHHHHHcCcccccccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccE
Q 010218 185 GKALFRAHVEGQLKSEIMSKPELFVEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNM 264 (515)
Q Consensus 185 ~~av~~vH~~G~lk~~v~~np~kYi~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDv 264 (515)
++||++||.+|.||++|++||++||+++|.++.+|.+|+++|+|+||+|||+++||+.+|+|++++++ .+++|++|||+
T Consensus 159 ~~av~~~h~~g~lk~~v~~dp~~yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~-~~~~w~~yFD~ 237 (343)
T TIGR02244 159 RDALDWVHRKGSLKKKVMENPEKYVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFL-GEHDWRDYFDV 237 (343)
T ss_pred HHHHHHhcccchHHHHHHHCHHHHhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcc-cccchHhhCcE
Confidence 99999999999999999999999999999999999999999999999999999999999999987666 67899999999
Q ss_pred EEEccCCCCCCCCCCCeEEEeCCCCceeccc--ccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccccccCc
Q 010218 265 VIVSARKPEFFQMSHPLYEVVTGEGLMRPCF--KARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRW 342 (515)
Q Consensus 265 VIv~A~KP~FF~~~~pf~~v~~~~g~~~~~~--~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gW 342 (515)
||++|+||+||++++|||+|++++|.+++.. .+++|+||+||||.+|++++|+++++||||||||++||+.+||.+||
T Consensus 238 IIt~a~KP~FF~~~~pf~~v~~~~g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw 317 (343)
T TIGR02244 238 VIVDARKPGFFTEGRPFRQVDVETGSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGW 317 (343)
T ss_pred EEeCCCCCcccCCCCceEEEeCCCCcccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCc
Confidence 9999999999999999999999999876543 37899999999999999999999999999999999999999999999
Q ss_pred eEEeehHhhHHHHHHHHhhhHHHHH
Q 010218 343 RTALICRELEEEYNALINSRGQRAR 367 (515)
Q Consensus 343 rT~aIVpELe~Ei~~~~~~~~~~~~ 367 (515)
||++|+||||.|+++|.++++++++
T Consensus 318 ~TvlI~pEL~~E~~~~~~~~~~~~~ 342 (343)
T TIGR02244 318 RTAAIIPELEQEVGILTNSKSLREE 342 (343)
T ss_pred EEEEEchhHHHHHHHHhhchhhhhc
Confidence 9999999999999999877665543
No 4
>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=100.00 E-value=1.5e-106 Score=830.65 Aligned_cols=413 Identities=44% Similarity=0.704 Sum_probs=377.2
Q ss_pred CCCCCCCCeeEecCccccCCCcEEEEecccceeccCccchHHHHHHHHHHHHHhcCCCCCCC--CCCccccccceEeecC
Q 010218 19 SSARNSPRGIFCSRTLNLRSISAIGYDMDYTLMHYNVMAWEGRAYDYCMVNLRNMGFPVEGL--AFDPDLVIRGLVIDKE 96 (515)
Q Consensus 19 ~~~~~~~~~VF~nr~l~L~~i~~iGFDmDyTLa~Y~~~~~e~L~y~~~~~~Lv~~gYP~~~l--~ydp~F~iRGL~~D~~ 96 (515)
...+..+++|||||+|+|++|.+|||||||||++|+++++|.|||+++.+.|++.|||.+++ .|||+|++|||++|.+
T Consensus 7 ~~~r~~~~~if~~rsl~l~~i~~~GfdmDyTL~~Y~~~~~esLay~~~~~~l~~~Gyp~~ll~~~~d~~f~~rGL~ld~~ 86 (424)
T KOG2469|consen 7 RDGRDVPHRIFCNRSLNLENIGIVGFDMDYTLARYNLPEMESLAYDLAQFLLKDKGYPNELLSTSFDWNFPCRGLVLDKE 86 (424)
T ss_pred ccccccchheehhhhhhhhcCcEEeeccccchhhhcccchHHHHHHHHHHHHHhcCChhhhhccccCccceeeeeEEecc
Confidence 34567889999999999999999999999999999999999999997777788999997654 6999999999999999
Q ss_pred CCcEEeecCCCcEEEEEecCccCCHHHHHHHhcCeeccccccccceechhhhchhHHHHHHHHHHHHhhCCCCCCCCCCC
Q 010218 97 KGNLVKADRFGYVKRAMHGTTMLSNRAVSEMYGRELVDLRKESRWEFLNTLFSVSEAVAYMQMVNRLDEGAIGPELGPLD 176 (515)
Q Consensus 97 ~GnlLKvD~~g~I~~a~hG~~~ls~~Ei~~~Y~~~~i~~~~~~r~~~l~tlFslpe~~L~a~lVd~~d~~~~~~~~~~~~ 176 (515)
+||+||+|++|+|++|+||+++++.+||.++||++.+++.+ ++|+.++|+|++||+.++||+||++|++...+.. .++
T Consensus 87 ~GN~lKld~~~~vl~a~hg~rfls~~~~~eiyg~~~~~~~~-~~~~~l~t~F~~~ea~~~aq~vd~~d~~~~~~~~-~~d 164 (424)
T KOG2469|consen 87 RGNLLKLDRFGYVLRAAHGTRFLSNEEISEIYGRKLVRLSD-SRYYLLNTLFSMPEADLFAQAVDFLDNGPEYGPV-DMD 164 (424)
T ss_pred CCceeeeeccCceeeeccccccccccchhhhcccccccccC-chhhhhhhhhhchhHHHHHhhcchhhcCCccCcc-chh
Confidence 99999999999999999999999999999999999999887 9999999999999999999999999999876443 789
Q ss_pred hHHHHHHHHHHHHhccchhhhHHHHHcCcccccccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCC
Q 010218 177 YKGLYKAVGKALFRAHVEGQLKSEIMSKPELFVEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDM 256 (515)
Q Consensus 177 y~~l~~dv~~av~~vH~~G~lk~~v~~np~kYi~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~ 256 (515)
|+.+|+||++|+++||.+|.+|++++++|+|||++++.++++|.++|++|||+||+|||.|+|||.+|+++++ .
T Consensus 165 yk~~~~~v~~~~~~~h~~~~lk~~~~~~pek~V~~d~~~v~~l~~~r~sGKk~fl~Tns~~~ytd~~mt~~~~------~ 238 (424)
T KOG2469|consen 165 YKPGWKDVRAAGNAVHLYGLLKKKMMGKPERYVVYDGTIVPLLSMLRDSGKKTFLHTNSDWDYTDIFMAFHYG------F 238 (424)
T ss_pred hcchHHHHHHHHhHHHHHHHHHHHHhcCCCceeeecCccccchHHHHhhccceEEeeccccchhhHHHHHHhC------C
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999994 7
Q ss_pred CCCCCccEEEEccCCCCCCCCCCCeEEEeCCCCceec---ccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccch
Q 010218 257 GWRDLFNMVIVSARKPEFFQMSHPLYEVVTGEGLMRP---CFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDV 333 (515)
Q Consensus 257 dWrd~FDvVIv~A~KP~FF~~~~pf~~v~~~~g~~~~---~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di 333 (515)
||+.|||+|||.|+||+||.+++++|+|+|++|++++ +.++++|++|+||+++.++++++.+|++|||+|||||+||
T Consensus 239 dW~~yfd~v~~~a~Kp~ff~e~~vlreV~t~~g~l~~g~~~~p~e~~~~ySggs~~~~~~~l~~~g~diLy~gdHi~~dv 318 (424)
T KOG2469|consen 239 DWETYFDLVETRAAKPGFFHEGTVLREVEPQEGLLKNGDNTGPLEQGGVYSGGSLKTVETSMKVKGKDILYGGDHIWGDV 318 (424)
T ss_pred CcceeEEEEEEeccCCccccccceeeeeccccccccccccCCcchhcccCCcchHHHHHHHhcccccceeecccceeeeE
Confidence 9999999999999999999999999999999999886 4578999999999999999999999999999999999999
Q ss_pred hccccccCceEEeehHhhHHHHHHHHhhhHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhcCCCChhhhhcccCChHHHHH
Q 010218 334 SQSKVHLRWRTALICRELEEEYNALINSRGQRARLVELINQKEVVGDLFNQLRLSLQRRNRGHPAQTLAATNMDDQELTE 413 (515)
Q Consensus 334 ~~skk~~gWrT~aIVpELe~Ei~~~~~~~~~~~~l~~l~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (515)
+.|||++||||++|||||+.|..+|.+++ +++.++++....++|+|++++.++.+..... .+.++++++++
T Consensus 319 l~skk~~~wrt~lv~peL~~e~~v~~~~k---e~~~el~~~~~~laDiy~~l~~s~~s~~~~~------~~~r~~~~~~~ 389 (424)
T KOG2469|consen 319 LVSKKRRGWRTVLVAPELEREDLVLLDSK---EEFIELLNWSSKLADIYPNLDLSLLSAPKDL------SIKRDIQKLTE 389 (424)
T ss_pred EecceecceEEEEEehhhhhhhhhhccch---HHHHHHhccchhhHhhccCCchhhhhccccc------chhHHHHHHHH
Confidence 99999999999999999999999998765 4677777889999999999988765533222 22333333332
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhcccccCccccccccCCCCcChhhhhhhhhhhhhhc
Q 010218 414 SMQKLLVVMQRLDQKIAPMLESDGELFNKRWGFLSRAGLWDKSHLMRQIEKYADIYTS 471 (515)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~Fn~~~GslfRtg~~~~S~Fa~qv~RyAdlYtS 471 (515)
+| +.|+-.|||+||||+ +.|.||.|++||||+|||
T Consensus 390 ~~----------------------dk~~~~~~sl~~s~~-~~t~~a~q~~r~A~~y~s 424 (424)
T KOG2469|consen 390 CM----------------------DKFYGVWGSLFRTGY-QRTRFALQVERYADLYTS 424 (424)
T ss_pred hH----------------------HHHhcchHHhhcccc-ccchHHHHHHHHHHHhcC
Confidence 22 335668999999997 999999999999999997
No 5
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=99.08 E-value=8.3e-10 Score=106.36 Aligned_cols=106 Identities=25% Similarity=0.374 Sum_probs=82.2
Q ss_pred cccccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeEEEeC
Q 010218 207 LFVEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLYEVVT 286 (515)
Q Consensus 207 kYi~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~~v~~ 286 (515)
.++...|.+..+|..|+++|.++.++||++-.++...+..+ .|.+|||.|++....
T Consensus 91 ~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~---------~l~~~f~~i~~~~~~--------------- 146 (221)
T TIGR02253 91 AYLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERL---------GVRDFFDAVITSEEE--------------- 146 (221)
T ss_pred HhCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhC---------ChHHhccEEEEeccC---------------
Confidence 35667899999999999999999999999988888777653 489999999875421
Q ss_pred CCCceecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccccccCceEEeehH
Q 010218 287 GEGLMRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALICR 349 (515)
Q Consensus 287 ~~g~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aIVp 349 (515)
|..+| ...+ .....+.+|....+++||||+...||..+++ .||+|++|-.
T Consensus 147 --~~~KP-----~~~~-----~~~~~~~~~~~~~~~~~igDs~~~di~~A~~-aG~~~i~~~~ 196 (221)
T TIGR02253 147 --GVEKP-----HPKI-----FYAALKRLGVKPEEAVMVGDRLDKDIKGAKN-LGMKTVWINQ 196 (221)
T ss_pred --CCCCC-----CHHH-----HHHHHHHcCCChhhEEEECCChHHHHHHHHH-CCCEEEEECC
Confidence 11111 1112 3456677788889999999999999998886 5999999853
No 6
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=98.81 E-value=8.7e-08 Score=94.98 Aligned_cols=102 Identities=16% Similarity=0.167 Sum_probs=75.5
Q ss_pred cccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCc-cEEEEccCCCCCCCCCCCeEEEeCC
Q 010218 209 VEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLF-NMVIVSARKPEFFQMSHPLYEVVTG 287 (515)
Q Consensus 209 i~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~F-DvVIv~A~KP~FF~~~~pf~~v~~~ 287 (515)
+..-|....+|..|+++|.++.++||+.-..++.+++.+ .+.++| |.||+...-+
T Consensus 98 ~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~---------gl~~~f~d~ii~~~~~~--------------- 153 (253)
T TIGR01422 98 SSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEA---------ALQGYRPDYNVTTDDVP--------------- 153 (253)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHH---------HhcCCCCceEEccccCC---------------
Confidence 456789999999999999999999999999999888754 266775 8887743210
Q ss_pred CCceecccccCCCccccCCCHHHHHHHhCcC-CCcEEEEcCccccchhccccccCceEEeeh
Q 010218 288 EGLMRPCFKARTGGLYSGGSAQMIENSLNIH-GDEILYVGDHIYTDVSQSKVHLRWRTALIC 348 (515)
Q Consensus 288 ~g~~~~~~~l~~g~vY~gGn~~~l~~ll~~~-g~~VLY~GDHI~~Di~~skk~~gWrT~aIV 348 (515)
.+ +| ...+| ....+.+|.. ..+++||||+. .||..++. .|++|++|.
T Consensus 154 ~~--KP-----~p~~~-----~~a~~~l~~~~~~~~l~IGDs~-~Di~aA~~-aGi~~i~v~ 201 (253)
T TIGR01422 154 AG--RP-----APWMA-----LKNAIELGVYDVAACVKVGDTV-PDIEEGRN-AGMWTVGLI 201 (253)
T ss_pred CC--CC-----CHHHH-----HHHHHHcCCCCchheEEECCcH-HHHHHHHH-CCCeEEEEe
Confidence 00 11 11222 3455566764 67899999998 99998875 699999985
No 7
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=98.75 E-value=1.3e-07 Score=95.47 Aligned_cols=101 Identities=11% Similarity=0.216 Sum_probs=78.6
Q ss_pred ccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeEEEeCCCC
Q 010218 210 EPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLYEVVTGEG 289 (515)
Q Consensus 210 ~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~~v~~~~g 289 (515)
..-|.+..+|..|++.|.++.++||++..++..++..+ .|.+|||.||+...-. .+
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~---------gl~~~Fd~ii~~~d~~---------------~~ 164 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAV---------GMEGFFSVVLAAEDVY---------------RG 164 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHc---------CCHhhCcEEEecccCC---------------CC
Confidence 44688999999999999999999999999999998864 3999999999764210 00
Q ss_pred ceecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccccccCceEEeeh
Q 010218 290 LMRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALIC 348 (515)
Q Consensus 290 ~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aIV 348 (515)
+| ...+| ....+.+|....+++||||.. .||..++. .||+|++|-
T Consensus 165 --KP-----~Pe~~-----~~a~~~l~~~p~~~l~IgDs~-~Di~aA~~-aG~~~i~v~ 209 (260)
T PLN03243 165 --KP-----DPEMF-----MYAAERLGFIPERCIVFGNSN-SSVEAAHD-GCMKCVAVA 209 (260)
T ss_pred --CC-----CHHHH-----HHHHHHhCCChHHeEEEcCCH-HHHHHHHH-cCCEEEEEe
Confidence 11 11233 356677788889999999995 69888875 699999884
No 8
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=98.70 E-value=2.6e-07 Score=89.09 Aligned_cols=102 Identities=22% Similarity=0.223 Sum_probs=77.3
Q ss_pred cccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeEEEeCCC
Q 010218 209 VEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLYEVVTGE 288 (515)
Q Consensus 209 i~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~~v~~~~ 288 (515)
+..-|....+|..|+++|.++.++||+.-.++..++..+ .|.+|||.|++...-+ .
T Consensus 81 ~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~---------gl~~~f~~i~~~~~~~---------------~ 136 (214)
T PRK13288 81 VTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLT---------GLDEFFDVVITLDDVE---------------H 136 (214)
T ss_pred cccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc---------CChhceeEEEecCcCC---------------C
Confidence 345688999999999999999999999999988888753 4899999998732210 0
Q ss_pred CceecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccccccCceEEeeh
Q 010218 289 GLMRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALIC 348 (515)
Q Consensus 289 g~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aIV 348 (515)
+ +| ++.+ ...+.+.++...++++||||+. .||..++. .|++|++|-
T Consensus 137 ~--Kp-----~p~~-----~~~~~~~~~~~~~~~~~iGDs~-~Di~aa~~-aG~~~i~v~ 182 (214)
T PRK13288 137 A--KP-----DPEP-----VLKALELLGAKPEEALMVGDNH-HDILAGKN-AGTKTAGVA 182 (214)
T ss_pred C--CC-----CcHH-----HHHHHHHcCCCHHHEEEECCCH-HHHHHHHH-CCCeEEEEc
Confidence 0 01 1222 2356666788888999999997 89998876 599999874
No 9
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=98.64 E-value=7e-07 Score=89.51 Aligned_cols=103 Identities=14% Similarity=0.070 Sum_probs=74.0
Q ss_pred cccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCC-ccEEEEccCCCCCCCCCCCeEEEeCC
Q 010218 209 VEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDL-FNMVIVSARKPEFFQMSHPLYEVVTG 287 (515)
Q Consensus 209 i~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~-FDvVIv~A~KP~FF~~~~pf~~v~~~ 287 (515)
+..-|....+|..|+++|.++.++||+.-..++.++.-+- +.++ ||.||+...-+
T Consensus 100 ~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~---------l~~~~~d~i~~~~~~~--------------- 155 (267)
T PRK13478 100 ATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAA---------AQGYRPDHVVTTDDVP--------------- 155 (267)
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHh---------hcCCCceEEEcCCcCC---------------
Confidence 4556889999999999999999999999999988886431 4455 48776553210
Q ss_pred CCceecccccCCCccccCCCHHHHHHHhCcC-CCcEEEEcCccccchhccccccCceEEeehH
Q 010218 288 EGLMRPCFKARTGGLYSGGSAQMIENSLNIH-GDEILYVGDHIYTDVSQSKVHLRWRTALICR 349 (515)
Q Consensus 288 ~g~~~~~~~l~~g~vY~gGn~~~l~~ll~~~-g~~VLY~GDHI~~Di~~skk~~gWrT~aIVp 349 (515)
..+| ...+| ....+.+|.. ..+++||||.. .||..++. .|++|++|..
T Consensus 156 --~~KP-----~p~~~-----~~a~~~l~~~~~~e~l~IGDs~-~Di~aA~~-aG~~~i~v~~ 204 (267)
T PRK13478 156 --AGRP-----YPWMA-----LKNAIELGVYDVAACVKVDDTV-PGIEEGLN-AGMWTVGVIL 204 (267)
T ss_pred --CCCC-----ChHHH-----HHHHHHcCCCCCcceEEEcCcH-HHHHHHHH-CCCEEEEEcc
Confidence 0011 11222 3455566775 47899999998 89998876 6999999964
No 10
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=98.62 E-value=1.2e-06 Score=85.10 Aligned_cols=104 Identities=18% Similarity=0.191 Sum_probs=79.8
Q ss_pred cccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeEEEeCCC
Q 010218 209 VEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLYEVVTGE 288 (515)
Q Consensus 209 i~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~~v~~~~ 288 (515)
...-|.+..+|..+++.|.++.++||+.-..+..+++.+ .+.++||.|++...-+ .
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~---------~l~~~f~~~~~~~~~~---------------~ 146 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMF---------DLRDYFDALASAEKLP---------------Y 146 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhC---------cchhcccEEEEcccCC---------------C
Confidence 345588999999999999999999999999999988863 3889999988763210 0
Q ss_pred CceecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccccccCceEEeehHh
Q 010218 289 GLMRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALICRE 350 (515)
Q Consensus 289 g~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aIVpE 350 (515)
++ | ++.+ ...+++.+|....+++||||+. .||...+. .|++|++|-..
T Consensus 147 ~K--p-----~~~~-----~~~~~~~~~~~~~~~~~igDs~-~Di~aA~~-aG~~~i~v~~~ 194 (222)
T PRK10826 147 SK--P-----HPEV-----YLNCAAKLGVDPLTCVALEDSF-NGMIAAKA-ARMRSIVVPAP 194 (222)
T ss_pred CC--C-----CHHH-----HHHHHHHcCCCHHHeEEEcCCh-hhHHHHHH-cCCEEEEecCC
Confidence 10 1 1112 2567777888888999999998 79998875 69999998643
No 11
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=98.61 E-value=6.8e-07 Score=86.31 Aligned_cols=102 Identities=17% Similarity=0.223 Sum_probs=76.3
Q ss_pred ccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCC--CCccEEEEccCCCCCCCCCCCeEEEeCC
Q 010218 210 EPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWR--DLFNMVIVSARKPEFFQMSHPLYEVVTG 287 (515)
Q Consensus 210 ~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWr--d~FDvVIv~A~KP~FF~~~~pf~~v~~~ 287 (515)
..-|....+|..|+++|.++.++||+.-.++..++..+ .|. ++||.|++...-.
T Consensus 87 ~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~---------~l~~~~~f~~i~~~~~~~--------------- 142 (220)
T TIGR03351 87 VALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKL---------GWTVGDDVDAVVCPSDVA--------------- 142 (220)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHh---------hhhhhccCCEEEcCCcCC---------------
Confidence 45678999999999999999999999999999998854 266 9999999874421
Q ss_pred CCceecccccCCCccccCCCHHHHHHHhCcC-CCcEEEEcCccccchhccccccCceE-EeehH
Q 010218 288 EGLMRPCFKARTGGLYSGGSAQMIENSLNIH-GDEILYVGDHIYTDVSQSKVHLRWRT-ALICR 349 (515)
Q Consensus 288 ~g~~~~~~~l~~g~vY~gGn~~~l~~ll~~~-g~~VLY~GDHI~~Di~~skk~~gWrT-~aIVp 349 (515)
.++ | ...+| ....+.+|.. ..+++||||.. .||..++. .||+| ++|..
T Consensus 143 ~~K--P-----~p~~~-----~~a~~~~~~~~~~~~~~igD~~-~Di~aa~~-aG~~~~i~~~~ 192 (220)
T TIGR03351 143 AGR--P-----APDLI-----LRAMELTGVQDVQSVAVAGDTP-NDLEAGIN-AGAGAVVGVLT 192 (220)
T ss_pred CCC--C-----CHHHH-----HHHHHHcCCCChhHeEEeCCCH-HHHHHHHH-CCCCeEEEEec
Confidence 011 1 11122 2344556776 57999999997 79998875 69999 78754
No 12
>PLN02940 riboflavin kinase
Probab=98.57 E-value=1.2e-06 Score=93.09 Aligned_cols=102 Identities=16% Similarity=0.235 Sum_probs=76.9
Q ss_pred ccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeEEEeCCCC
Q 010218 210 EPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLYEVVTGEG 289 (515)
Q Consensus 210 ~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~~v~~~~g 289 (515)
..-|....+|..|++.|.++.++||+.-.+++..+.-.+ .|.++||.|++...-.
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~--------gl~~~Fd~ii~~d~v~----------------- 147 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQ--------GWKESFSVIVGGDEVE----------------- 147 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcc--------ChHhhCCEEEehhhcC-----------------
Confidence 345889999999999999999999999999888776323 3999999998864210
Q ss_pred ceecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccccccCceEEeeh
Q 010218 290 LMRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALIC 348 (515)
Q Consensus 290 ~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aIV 348 (515)
..+| +..+ .....+.+|....++++|||.. .||..++. .|++|++|-
T Consensus 148 ~~KP-----~p~~-----~~~a~~~lgv~p~~~l~VGDs~-~Di~aA~~-aGi~~I~v~ 194 (382)
T PLN02940 148 KGKP-----SPDI-----FLEAAKRLNVEPSNCLVIEDSL-PGVMAGKA-AGMEVIAVP 194 (382)
T ss_pred CCCC-----CHHH-----HHHHHHHcCCChhHEEEEeCCH-HHHHHHHH-cCCEEEEEC
Confidence 0001 1122 2355666788889999999998 59988875 699999984
No 13
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=98.49 E-value=4e-06 Score=78.75 Aligned_cols=93 Identities=10% Similarity=0.161 Sum_probs=67.5
Q ss_pred hHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeEEEeCCCCceeccc
Q 010218 216 PLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLYEVVTGEGLMRPCF 295 (515)
Q Consensus 216 ~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~~v~~~~g~~~~~~ 295 (515)
..+|..|++. .++.++|||.-.+++..++.+ .|.+|||.|++...- +..+|
T Consensus 93 ~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~---------~l~~~fd~i~~~~~~-----------------~~~KP-- 143 (188)
T PRK10725 93 IEVVKAWHGR-RPMAVGTGSESAIAEALLAHL---------GLRRYFDAVVAADDV-----------------QHHKP-- 143 (188)
T ss_pred HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhC---------CcHhHceEEEehhhc-----------------cCCCC--
Confidence 5778888765 789999999999999988864 389999998875321 00011
Q ss_pred ccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccccccCceEEee
Q 010218 296 KARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALI 347 (515)
Q Consensus 296 ~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aI 347 (515)
...+| ....+.+|....+++||||. ..||..++. .||+|++|
T Consensus 144 ---~p~~~-----~~~~~~~~~~~~~~l~igDs-~~di~aA~~-aG~~~i~~ 185 (188)
T PRK10725 144 ---APDTF-----LRCAQLMGVQPTQCVVFEDA-DFGIQAARA-AGMDAVDV 185 (188)
T ss_pred ---ChHHH-----HHHHHHcCCCHHHeEEEecc-HhhHHHHHH-CCCEEEee
Confidence 11111 24455567777899999998 889998875 69999987
No 14
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=98.44 E-value=4.1e-06 Score=89.04 Aligned_cols=101 Identities=11% Similarity=0.169 Sum_probs=77.4
Q ss_pred cCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeEEEeCCCCc
Q 010218 211 PDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLYEVVTGEGL 290 (515)
Q Consensus 211 kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~~v~~~~g~ 290 (515)
.-|....+|..|+++|.++.++||++-.+++..+..+ .|.+|||.||+..... .+
T Consensus 217 l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~l---------gL~~yFd~Iv~sddv~---------------~~- 271 (381)
T PLN02575 217 LRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSI---------GIRGFFSVIVAAEDVY---------------RG- 271 (381)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc---------CCHHHceEEEecCcCC---------------CC-
Confidence 4478999999999999999999999999999988864 3899999998864321 00
Q ss_pred eecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccccccCceEEeehH
Q 010218 291 MRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALICR 349 (515)
Q Consensus 291 ~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aIVp 349 (515)
+| ...+| ....+.+|...++++||||.. .||..++. .||+|++|..
T Consensus 272 -KP-----~Peif-----l~A~~~lgl~Peecl~IGDS~-~DIeAAk~-AGm~~IgV~~ 317 (381)
T PLN02575 272 -KP-----DPEMF-----IYAAQLLNFIPERCIVFGNSN-QTVEAAHD-ARMKCVAVAS 317 (381)
T ss_pred -CC-----CHHHH-----HHHHHHcCCCcccEEEEcCCH-HHHHHHHH-cCCEEEEECC
Confidence 01 11222 245566788889999999987 58877764 6999999964
No 15
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=98.42 E-value=6.5e-06 Score=79.31 Aligned_cols=102 Identities=21% Similarity=0.310 Sum_probs=75.9
Q ss_pred cccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeEEEeCCC
Q 010218 209 VEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLYEVVTGE 288 (515)
Q Consensus 209 i~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~~v~~~~ 288 (515)
...-|.+..+|..++++|.++.++||+.-.+...++..+ .|.++||.|++...-
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~---------~l~~~f~~~~~~~~~----------------- 145 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEAL---------GIADYFSVVIGGDSL----------------- 145 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc---------CCccCccEEEcCCCC-----------------
Confidence 446689999999999999999999999999888877753 378899987653210
Q ss_pred CceecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccccccCceEEeeh
Q 010218 289 GLMRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALIC 348 (515)
Q Consensus 289 g~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aIV 348 (515)
+..+| ++ .....+.+.++....+++||||+. .|+-.++. .||.|++|.
T Consensus 146 ~~~kp-----~~-----~~~~~~~~~~~~~~~~~i~igD~~-~Di~~a~~-~g~~~i~v~ 193 (226)
T PRK13222 146 PNKKP-----DP-----APLLLACEKLGLDPEEMLFVGDSR-NDIQAARA-AGCPSVGVT 193 (226)
T ss_pred CCCCc-----Ch-----HHHHHHHHHcCCChhheEEECCCH-HHHHHHHH-CCCcEEEEC
Confidence 00001 11 123455666677888999999995 89998876 599999985
No 16
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=98.32 E-value=1.3e-05 Score=77.67 Aligned_cols=96 Identities=14% Similarity=0.178 Sum_probs=70.3
Q ss_pred ccccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCcc-EEEEcc----CCCCCCCCCCCeE
Q 010218 208 FVEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFN-MVIVSA----RKPEFFQMSHPLY 282 (515)
Q Consensus 208 Yi~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FD-vVIv~A----~KP~FF~~~~pf~ 282 (515)
.+...|.++.+|..| +.++.++||++-.+++..+... +..++|| +|++.. .||
T Consensus 86 ~~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~---------~l~~~F~~~v~~~~~~~~~KP---------- 143 (221)
T PRK10563 86 ELEPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKT---------GMLHYFPDKLFSGYDIQRWKP---------- 143 (221)
T ss_pred cCCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhc---------ChHHhCcceEeeHHhcCCCCC----------
Confidence 455678899999988 4789999999999888877643 4788996 555432 232
Q ss_pred EEeCCCCceecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccccccCceEEeeh
Q 010218 283 EVVTGEGLMRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALIC 348 (515)
Q Consensus 283 ~v~~~~g~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aIV 348 (515)
+..+| ....+.+|....+++||||+. .||..++ ..|++|+++.
T Consensus 144 ----------------~p~~~-----~~a~~~~~~~p~~~l~igDs~-~di~aA~-~aG~~~i~~~ 186 (221)
T PRK10563 144 ----------------DPALM-----FHAAEAMNVNVENCILVDDSS-AGAQSGI-AAGMEVFYFC 186 (221)
T ss_pred ----------------ChHHH-----HHHHHHcCCCHHHeEEEeCcH-hhHHHHH-HCCCEEEEEC
Confidence 11222 345566788788999999998 7998776 4699999874
No 17
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=98.31 E-value=8.5e-07 Score=80.40 Aligned_cols=104 Identities=25% Similarity=0.370 Sum_probs=83.1
Q ss_pred ccccccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeEEEe
Q 010218 206 ELFVEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLYEVV 285 (515)
Q Consensus 206 ~kYi~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~~v~ 285 (515)
...+...|.+..+|.++++.|.++.++||++-..+...++.+ .|.++||.|++....+.
T Consensus 73 ~~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~---------~~~~~f~~i~~~~~~~~------------ 131 (176)
T PF13419_consen 73 ESKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERL---------GLDDYFDEIISSDDVGS------------ 131 (176)
T ss_dssp HGGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHT---------THGGGCSEEEEGGGSSS------------
T ss_pred hhccchhhhhhhhhhhcccccceeEEeecCCccccccccccc---------ccccccccccccchhhh------------
Confidence 367788999999999999999999999999999888888865 37799999998754321
Q ss_pred CCCCceecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccccccCceEEee
Q 010218 286 TGEGLMRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALI 347 (515)
Q Consensus 286 ~~~g~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aI 347 (515)
.+| ...+ ...+.+-+|....++++|||+. .||..++. .||.|+.|
T Consensus 132 -----~Kp-----~~~~-----~~~~~~~~~~~p~~~~~vgD~~-~d~~~A~~-~G~~~i~v 176 (176)
T PF13419_consen 132 -----RKP-----DPDA-----YRRALEKLGIPPEEILFVGDSP-SDVEAAKE-AGIKTIWV 176 (176)
T ss_dssp -----STT-----SHHH-----HHHHHHHHTSSGGGEEEEESSH-HHHHHHHH-TTSEEEEE
T ss_pred -----hhh-----HHHH-----HHHHHHHcCCCcceEEEEeCCH-HHHHHHHH-cCCeEEeC
Confidence 011 1122 3566667799999999999999 99998875 69999986
No 18
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=98.27 E-value=3.2e-06 Score=78.38 Aligned_cols=100 Identities=31% Similarity=0.484 Sum_probs=73.1
Q ss_pred cccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeEEEeCCC
Q 010218 209 VEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLYEVVTGE 288 (515)
Q Consensus 209 i~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~~v~~~~ 288 (515)
+...|.+..+|.+|++.|.++.++||+.... ...... + .+.++||.||+... .
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~-~--------~l~~~f~~i~~~~~-----------------~ 136 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQE-L--------GLRDLFDVVIFSGD-----------------V 136 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHh-c--------CCHHHCCEEEEcCC-----------------C
Confidence 6678999999999999999999999999988 443331 2 36779999987521 0
Q ss_pred CceecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccccccCceEEee
Q 010218 289 GLMRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALI 347 (515)
Q Consensus 289 g~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aI 347 (515)
+..+| ...+| ..+.+.+|....+++||||+. .||..+++ .||+|++|
T Consensus 137 ~~~KP-----~~~~~-----~~~~~~~~~~~~~~~~vgD~~-~di~aA~~-~G~~~i~v 183 (183)
T TIGR01509 137 GRGKP-----DPDIY-----LLALKKLGLKPEECLFVDDSP-AGIEAAKA-AGMHTVLV 183 (183)
T ss_pred CCCCC-----CHHHH-----HHHHHHcCCCcceEEEEcCCH-HHHHHHHH-cCCEEEeC
Confidence 10111 11222 456677788889999999998 58887764 69999986
No 19
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=98.24 E-value=2.3e-06 Score=81.48 Aligned_cols=102 Identities=25% Similarity=0.468 Sum_probs=78.3
Q ss_pred ccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeEEEeCCCC
Q 010218 210 EPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLYEVVTGEG 289 (515)
Q Consensus 210 ~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~~v~~~~g 289 (515)
..-|....+|.+|+++|.++.++||++..+....++.+ .+.++||.|++...- |
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~---------gl~~~fd~i~~s~~~-----------------~ 145 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHA---------GLDDPFDAVLSADAV-----------------R 145 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHC---------CChhhhheeEehhhc-----------------C
Confidence 35689999999999999999999999999999888743 388999998875210 1
Q ss_pred ceecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccccccCceEEeehH
Q 010218 290 LMRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALICR 349 (515)
Q Consensus 290 ~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aIVp 349 (515)
..+| ...+ .....+.+|....++++|||+. .||..++. .||+|+.|-+
T Consensus 146 ~~KP-----~~~~-----~~~~~~~~~~~p~~~~~vgD~~-~Di~~A~~-~G~~~i~v~r 193 (198)
T TIGR01428 146 AYKP-----APQV-----YQLALEALGVPPDEVLFVASNP-WDLGGAKK-FGFKTAWVNR 193 (198)
T ss_pred CCCC-----CHHH-----HHHHHHHhCCChhhEEEEeCCH-HHHHHHHH-CCCcEEEecC
Confidence 1111 1112 2456677788888999999999 89998865 6999999865
No 20
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=98.21 E-value=4.3e-06 Score=80.07 Aligned_cols=102 Identities=15% Similarity=0.279 Sum_probs=74.5
Q ss_pred ccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeEEEeCCCC
Q 010218 210 EPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLYEVVTGEG 289 (515)
Q Consensus 210 ~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~~v~~~~g 289 (515)
...|.+..+|..++++|.++.++||++-..+....... ..|.++||.|++... .|
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~--------~~l~~~fd~v~~s~~-----------------~~ 138 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEY--------PEVRAAADHIYLSQD-----------------LG 138 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhc--------hhHHHhcCEEEEecc-----------------cC
Confidence 35688999999999999999999999977655443322 248899999987642 11
Q ss_pred ceecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccccccCceEEeeh
Q 010218 290 LMRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALIC 348 (515)
Q Consensus 290 ~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aIV 348 (515)
..+| +..+| ....+.+|....+++||||+.. ||..++. .||+|+.|-
T Consensus 139 ~~KP-----~p~~~-----~~~~~~~~~~p~~~l~vgD~~~-di~aA~~-aG~~~i~~~ 185 (199)
T PRK09456 139 MRKP-----EARIY-----QHVLQAEGFSAADAVFFDDNAD-NIEAANA-LGITSILVT 185 (199)
T ss_pred CCCC-----CHHHH-----HHHHHHcCCChhHeEEeCCCHH-HHHHHHH-cCCEEEEec
Confidence 1112 23344 4566777888899999999975 7776665 799999874
No 21
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=98.12 E-value=6.8e-06 Score=80.70 Aligned_cols=103 Identities=14% Similarity=0.134 Sum_probs=77.8
Q ss_pred ccccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeEEEeCC
Q 010218 208 FVEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLYEVVTG 287 (515)
Q Consensus 208 Yi~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~~v~~~ 287 (515)
++..-|....+|..|++.|.++.++||++-.++..++..+ .|.++||+|++.-..+
T Consensus 93 ~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~---------~l~~~f~~i~~~~~~~--------------- 148 (229)
T PRK13226 93 QSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQL---------GWEQRCAVLIGGDTLA--------------- 148 (229)
T ss_pred cCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc---------CchhcccEEEecCcCC---------------
Confidence 4556789999999999999999999999988888777643 4899999987653211
Q ss_pred CCceecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccccccCceEEeeh
Q 010218 288 EGLMRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALIC 348 (515)
Q Consensus 288 ~g~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aIV 348 (515)
..+| ...+ .....+.+|....+++||||+. .||..++. .||+|++|.
T Consensus 149 --~~KP-----~p~~-----~~~~~~~l~~~p~~~l~IGDs~-~Di~aA~~-aG~~~i~v~ 195 (229)
T PRK13226 149 --ERKP-----HPLP-----LLVAAERIGVAPTDCVYVGDDE-RDILAARA-AGMPSVAAL 195 (229)
T ss_pred --CCCC-----CHHH-----HHHHHHHhCCChhhEEEeCCCH-HHHHHHHH-CCCcEEEEe
Confidence 0011 1112 2356777888889999999995 89987764 699999983
No 22
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=98.06 E-value=7.7e-06 Score=78.36 Aligned_cols=103 Identities=20% Similarity=0.234 Sum_probs=78.2
Q ss_pred ccccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeEEEeCC
Q 010218 208 FVEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLYEVVTG 287 (515)
Q Consensus 208 Yi~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~~v~~~ 287 (515)
.+..-|....+|.+|+++|.++.++||+.-.++...+..+ .|.++||.|++...
T Consensus 73 ~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~---------~l~~~f~~i~~~~~----------------- 126 (205)
T TIGR01454 73 EVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEAL---------GLLPLFDHVIGSDE----------------- 126 (205)
T ss_pred ccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHc---------CChhheeeEEecCc-----------------
Confidence 4567789999999999999999999999999999888753 48999998876311
Q ss_pred CCceecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccccccCceEEeeh
Q 010218 288 EGLMRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALIC 348 (515)
Q Consensus 288 ~g~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aIV 348 (515)
.+..+| +. .-.....+.+|....+++||||+. .||..+++ .|+++++|.
T Consensus 127 ~~~~KP-----~~-----~~~~~~~~~~~~~~~~~l~igD~~-~Di~aA~~-~Gi~~i~~~ 175 (205)
T TIGR01454 127 VPRPKP-----AP-----DIVREALRLLDVPPEDAVMVGDAV-TDLASARA-AGTATVAAL 175 (205)
T ss_pred CCCCCC-----Ch-----HHHHHHHHHcCCChhheEEEcCCH-HHHHHHHH-cCCeEEEEE
Confidence 000011 11 122355666788889999999997 79998876 599999884
No 23
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=98.01 E-value=1.3e-05 Score=79.75 Aligned_cols=102 Identities=16% Similarity=0.171 Sum_probs=79.4
Q ss_pred cccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeEEEeCCC
Q 010218 209 VEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLYEVVTGE 288 (515)
Q Consensus 209 i~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~~v~~~~ 288 (515)
+..-|.+..+|..|++.|.++.++||++-.++...+..+ .|.+|||.||+...-+.
T Consensus 107 ~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~---------gl~~~Fd~iv~~~~~~~--------------- 162 (248)
T PLN02770 107 LKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLL---------GLSDFFQAVIIGSECEH--------------- 162 (248)
T ss_pred CCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHc---------CChhhCcEEEecCcCCC---------------
Confidence 445688999999999999999999999999999999864 38999999988763210
Q ss_pred CceecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccccccCceEEeeh
Q 010218 289 GLMRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALIC 348 (515)
Q Consensus 289 g~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aIV 348 (515)
+ +| +..+ .....+.+|....+++||||.. .||..++. .|++|++|-
T Consensus 163 ~--KP-----~p~~-----~~~a~~~~~~~~~~~l~vgDs~-~Di~aA~~-aGi~~i~v~ 208 (248)
T PLN02770 163 A--KP-----HPDP-----YLKALEVLKVSKDHTFVFEDSV-SGIKAGVA-AGMPVVGLT 208 (248)
T ss_pred C--CC-----ChHH-----HHHHHHHhCCChhHEEEEcCCH-HHHHHHHH-CCCEEEEEe
Confidence 0 01 1111 2345566788888999999999 89998874 699999984
No 24
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=98.00 E-value=0.00011 Score=71.79 Aligned_cols=103 Identities=22% Similarity=0.282 Sum_probs=74.5
Q ss_pred ccccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeEEEeCC
Q 010218 208 FVEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLYEVVTG 287 (515)
Q Consensus 208 Yi~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~~v~~~ 287 (515)
....-|.++.+|..|+++|-+++++||-+-.+++.+.... .+.+|||+|++...-| ..+..
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~---------gl~~~F~~i~g~~~~~--~~KP~-------- 147 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKAL---------GLADYFDVIVGGDDVP--PPKPD-------- 147 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHh---------CCccccceEEcCCCCC--CCCcC--------
Confidence 4567899999999999999999999999999999999973 3889999999822110 00000
Q ss_pred CCceecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccccccCceEEeeh
Q 010218 288 EGLMRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALIC 348 (515)
Q Consensus 288 ~g~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aIV 348 (515)
| -....+++.+|....+++||||.+. ||...|.. |-.|++|-
T Consensus 148 -----P------------~~l~~~~~~~~~~~~~~l~VGDs~~-Di~aA~~A-g~~~v~v~ 189 (220)
T COG0546 148 -----P------------EPLLLLLEKLGLDPEEALMVGDSLN-DILAAKAA-GVPAVGVT 189 (220)
T ss_pred -----H------------HHHHHHHHHhCCChhheEEECCCHH-HHHHHHHc-CCCEEEEE
Confidence 0 0012445566776348999999985 88877754 67777763
No 25
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.99 E-value=2.1e-05 Score=75.23 Aligned_cols=104 Identities=17% Similarity=0.281 Sum_probs=79.1
Q ss_pred cccccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeEEEeC
Q 010218 207 LFVEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLYEVVT 286 (515)
Q Consensus 207 kYi~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~~v~~ 286 (515)
+.+...|....+|..|+++|.++.++||+.-.++..++..+ +|.++||.|++...-
T Consensus 82 ~~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~---------~l~~~f~~~~~~~~~--------------- 137 (213)
T TIGR01449 82 ELTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELL---------GLAKYFSVLIGGDSL--------------- 137 (213)
T ss_pred ccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc---------CcHhhCcEEEecCCC---------------
Confidence 45567889999999999999999999999999999998853 489999988753211
Q ss_pred CCCceecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccccccCceEEeeh
Q 010218 287 GEGLMRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALIC 348 (515)
Q Consensus 287 ~~g~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aIV 348 (515)
+..+| +..+ ...+.+.+|....+++||||+ ..|+..+++ .|+.|++|.
T Consensus 138 --~~~Kp-----~p~~-----~~~~~~~~~~~~~~~~~igDs-~~d~~aa~~-aG~~~i~v~ 185 (213)
T TIGR01449 138 --AQRKP-----HPDP-----LLLAAERLGVAPQQMVYVGDS-RVDIQAARA-AGCPSVLLT 185 (213)
T ss_pred --CCCCC-----ChHH-----HHHHHHHcCCChhHeEEeCCC-HHHHHHHHH-CCCeEEEEc
Confidence 00011 1112 245666778888899999999 589998876 699999884
No 26
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=97.99 E-value=1.2e-05 Score=71.70 Aligned_cols=101 Identities=27% Similarity=0.305 Sum_probs=72.1
Q ss_pred ccccccCCCchHHHHHHHHhCceEEEEcCCC--------chhhHHhhcccccccCCCCCCCCCCccEEEEcc--CCCCCC
Q 010218 206 ELFVEPDPELPLALLDQKEAGKKLLLITNSD--------YHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSA--RKPEFF 275 (515)
Q Consensus 206 ~kYi~kd~~l~~~L~~lr~~GKklFLlTNS~--------~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A--~KP~FF 275 (515)
......-|....+|..|+++|.+++++||+. .+++...+..+- .. |+.+++.. .||
T Consensus 21 ~~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~---------l~--~~~~~~~~~~~KP--- 86 (132)
T TIGR01662 21 EDERILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELG---------VP--IDVLYACPHCRKP--- 86 (132)
T ss_pred HHHheeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCC---------CC--EEEEEECCCCCCC---
Confidence 3334566899999999999999999999999 666666666541 11 44444332 111
Q ss_pred CCCCCeEEEeCCCCceecccccCCCccccCCCHHHHHHHh-CcCCCcEEEEcCccccchhccccccCceEEeehH
Q 010218 276 QMSHPLYEVVTGEGLMRPCFKARTGGLYSGGSAQMIENSL-NIHGDEILYVGDHIYTDVSQSKVHLRWRTALICR 349 (515)
Q Consensus 276 ~~~~pf~~v~~~~g~~~~~~~l~~g~vY~gGn~~~l~~ll-~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aIVp 349 (515)
+. +....+.+.+ +....+++||||+...||..++. .||+|+.|-|
T Consensus 87 -----------------------~~-----~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~-~Gi~~i~~~~ 132 (132)
T TIGR01662 87 -----------------------KP-----GMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKR-AGLAFILVAP 132 (132)
T ss_pred -----------------------Ch-----HHHHHHHHHcCCCChhheEEEcCCCcccHHHHHH-CCCeEEEeeC
Confidence 11 2234666777 48889999999988899998865 6999999854
No 27
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=97.94 E-value=3.9e-05 Score=73.71 Aligned_cols=101 Identities=21% Similarity=0.255 Sum_probs=71.9
Q ss_pred cccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEcc----CCCCCCCCCCCeEEE
Q 010218 209 VEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSA----RKPEFFQMSHPLYEV 284 (515)
Q Consensus 209 i~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A----~KP~FF~~~~pf~~v 284 (515)
+...|.+..+|..|++.|.++.++||+.......... +. ...+.++||.|++.. +||
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~-~~------~~~l~~~fd~v~~s~~~~~~KP------------ 153 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEA-LL------PGDIMALFDAVVESCLEGLRKP------------ 153 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhH-hh------hhhhHhhCCEEEEeeecCCCCC------------
Confidence 3456789999999999999999999997655332221 11 124889999998542 343
Q ss_pred eCCCCceecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccccccCceEEeehH
Q 010218 285 VTGEGLMRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALICR 349 (515)
Q Consensus 285 ~~~~g~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aIVp 349 (515)
...+| ...++.+|....+++||||. ..||..+++ .||.|++|.+
T Consensus 154 --------------~p~~~-----~~~~~~~g~~~~~~l~i~D~-~~di~aA~~-aG~~~i~v~~ 197 (211)
T TIGR02247 154 --------------DPRIY-----QLMLERLGVAPEECVFLDDL-GSNLKPAAA-LGITTIKVSD 197 (211)
T ss_pred --------------CHHHH-----HHHHHHcCCCHHHeEEEcCC-HHHHHHHHH-cCCEEEEECC
Confidence 11222 45666778888999999875 668888875 5999999863
No 28
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=97.93 E-value=1.2e-05 Score=76.67 Aligned_cols=99 Identities=25% Similarity=0.389 Sum_probs=71.3
Q ss_pred ccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeEEEeCCCC
Q 010218 210 EPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLYEVVTGEG 289 (515)
Q Consensus 210 ~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~~v~~~~g 289 (515)
...|....+|.+|+++|.++.++||++... ...+.. -.|.++||.|++... .|
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~-~~~l~~---------~~l~~~fd~i~~s~~-----------------~~ 157 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSRL-RGLLEA---------LGLLEYFDFVVTSYE-----------------VG 157 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchhH-HHHHHH---------CCcHHhcceEEeecc-----------------cC
Confidence 456889999999999999999999998653 333432 248899999987432 11
Q ss_pred ceecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccccccCceEEe
Q 010218 290 LMRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTAL 346 (515)
Q Consensus 290 ~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~a 346 (515)
..+| ...+ .....+.+|....+++||||+...||..++. .||+|++
T Consensus 158 ~~KP-----~~~~-----~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~-aG~~~i~ 203 (203)
T TIGR02252 158 AEKP-----DPKI-----FQEALERAGISPEEALHIGDSLRNDYQGARA-AGWRALL 203 (203)
T ss_pred CCCC-----CHHH-----HHHHHHHcCCChhHEEEECCCchHHHHHHHH-cCCeeeC
Confidence 1111 1112 2345666788889999999999999998865 6999874
No 29
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=97.93 E-value=0.00022 Score=84.94 Aligned_cols=103 Identities=15% Similarity=0.247 Sum_probs=77.7
Q ss_pred cCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCC-CCccEEEEccCCCCCCCCCCCeEEEeCCCC
Q 010218 211 PDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWR-DLFNMVIVSARKPEFFQMSHPLYEVVTGEG 289 (515)
Q Consensus 211 kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWr-d~FDvVIv~A~KP~FF~~~~pf~~v~~~~g 289 (515)
.-|.+..+|..|+++|.++.++||+...+++.++..+ .|. .+||.|++.-.- +
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~---------gl~~~~Fd~iv~~~~~-----------------~ 215 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAA---------GLPLSMFDAIVSADAF-----------------E 215 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHc---------CCChhHCCEEEECccc-----------------c
Confidence 3589999999999999999999999999999988753 374 899998865310 0
Q ss_pred ceecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccccccCceEEeehHhh
Q 010218 290 LMRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALICREL 351 (515)
Q Consensus 290 ~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aIVpEL 351 (515)
..+| ...+| ....+.+|....+++||||.. .||..++. .||+|++|....
T Consensus 216 ~~KP-----~Pe~~-----~~a~~~lgv~p~e~v~IgDs~-~Di~AA~~-aGm~~I~v~~~~ 265 (1057)
T PLN02919 216 NLKP-----APDIF-----LAAAKILGVPTSECVVIEDAL-AGVQAARA-AGMRCIAVTTTL 265 (1057)
T ss_pred cCCC-----CHHHH-----HHHHHHcCcCcccEEEEcCCH-HHHHHHHH-cCCEEEEECCCC
Confidence 0011 12333 245666788889999999997 58887764 699999998653
No 30
>PRK09449 dUMP phosphatase; Provisional
Probab=97.93 E-value=1.8e-05 Score=76.63 Aligned_cols=103 Identities=19% Similarity=0.322 Sum_probs=75.7
Q ss_pred cccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeEEEeCCC
Q 010218 209 VEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLYEVVTGE 288 (515)
Q Consensus 209 i~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~~v~~~~ 288 (515)
+..-|....+|..|+ +|.++.++||+..+.+...+..+ .+.++||.|++...-
T Consensus 94 ~~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~---------~l~~~fd~v~~~~~~----------------- 146 (224)
T PRK09449 94 CTPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERT---------GLRDYFDLLVISEQV----------------- 146 (224)
T ss_pred CccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhC---------ChHHHcCEEEEECcc-----------------
Confidence 345688999999999 67899999999999998888753 378899999876421
Q ss_pred CceecccccCCCccccCCCHHHHHHHhCcCC-CcEEEEcCccccchhccccccCceEEeehH
Q 010218 289 GLMRPCFKARTGGLYSGGSAQMIENSLNIHG-DEILYVGDHIYTDVSQSKVHLRWRTALICR 349 (515)
Q Consensus 289 g~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g-~~VLY~GDHI~~Di~~skk~~gWrT~aIVp 349 (515)
|..+| ...+| ....+.+|... .+++||||+...||..++. .||+|+.|.+
T Consensus 147 ~~~KP-----~p~~~-----~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~-aG~~~i~~~~ 197 (224)
T PRK09449 147 GVAKP-----DVAIF-----DYALEQMGNPDRSRVLMVGDNLHSDILGGIN-AGIDTCWLNA 197 (224)
T ss_pred CCCCC-----CHHHH-----HHHHHHcCCCCcccEEEEcCCcHHHHHHHHH-CCCcEEEECC
Confidence 11111 11122 34555567654 5899999999999997765 6999999853
No 31
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=97.91 E-value=1.4e-05 Score=78.63 Aligned_cols=104 Identities=15% Similarity=0.229 Sum_probs=76.2
Q ss_pred cccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeEEEeCCC
Q 010218 209 VEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLYEVVTGE 288 (515)
Q Consensus 209 i~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~~v~~~~ 288 (515)
+..-|.+..+|..|+++|.++.++||++..+++..+..+ .|.++||.||+...-.
T Consensus 92 ~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~---------~l~~~fd~iv~s~~~~---------------- 146 (224)
T PRK14988 92 AVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHT---------GLDAHLDLLLSTHTFG---------------- 146 (224)
T ss_pred CCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHC---------CcHHHCCEEEEeeeCC----------------
Confidence 345688999999999999999999999999999887753 3999999998654210
Q ss_pred CceecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccccccCceEEeehHh
Q 010218 289 GLMRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALICRE 350 (515)
Q Consensus 289 g~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aIVpE 350 (515)
..+| ...+| ...++.+|....+++||||... ||..++ ..||+|+..|+-
T Consensus 147 -~~KP-----~p~~~-----~~~~~~~~~~p~~~l~igDs~~-di~aA~-~aG~~~~~~v~~ 195 (224)
T PRK14988 147 -YPKE-----DQRLW-----QAVAEHTGLKAERTLFIDDSEP-ILDAAA-QFGIRYCLGVTN 195 (224)
T ss_pred -CCCC-----CHHHH-----HHHHHHcCCChHHEEEEcCCHH-HHHHHH-HcCCeEEEEEeC
Confidence 0011 11122 3456677888899999999984 777665 479998665543
No 32
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=97.87 E-value=8.8e-05 Score=74.21 Aligned_cols=105 Identities=19% Similarity=0.350 Sum_probs=71.6
Q ss_pred cccccccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeEEE
Q 010218 205 PELFVEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLYEV 284 (515)
Q Consensus 205 p~kYi~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~~v 284 (515)
|+-|..-++.. .+|.++|+.|. .|.|||.++.--....=.+ + =..|||.||+++.=
T Consensus 109 ~~~~~~~~~~~-~~lq~lR~~g~--~l~iisN~d~r~~~~l~~~------~--l~~~fD~vv~S~e~------------- 164 (237)
T KOG3085|consen 109 PSAWKYLDGMQ-ELLQKLRKKGT--ILGIISNFDDRLRLLLLPL------G--LSAYFDFVVESCEV------------- 164 (237)
T ss_pred ccCceeccHHH-HHHHHHHhCCe--EEEEecCCcHHHHHHhhcc------C--HHHhhhhhhhhhhh-------------
Confidence 45555555555 89999999994 4455555554333222111 2 34899999987631
Q ss_pred eCCCCceecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccccccCceEEeeh
Q 010218 285 VTGEGLMRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALIC 348 (515)
Q Consensus 285 ~~~~g~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aIV 348 (515)
|..+| -.+||+ ..++.+|..-.+|+++||..-.|+..++. .||+|.+|.
T Consensus 165 ----g~~KP-----Dp~If~-----~al~~l~v~Pee~vhIgD~l~nD~~gA~~-~G~~ailv~ 213 (237)
T KOG3085|consen 165 ----GLEKP-----DPRIFQ-----LALERLGVKPEECVHIGDLLENDYEGARN-LGWHAILVD 213 (237)
T ss_pred ----ccCCC-----ChHHHH-----HHHHHhCCChHHeEEecCccccccHhHHH-cCCEEEEEc
Confidence 22222 234663 56778888888999999999999998875 699999997
No 33
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=97.85 E-value=2e-05 Score=73.53 Aligned_cols=98 Identities=16% Similarity=0.225 Sum_probs=70.0
Q ss_pred ccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeEEEeCCCC
Q 010218 210 EPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLYEVVTGEG 289 (515)
Q Consensus 210 ~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~~v~~~~g 289 (515)
..-|.+..+|..|+++|.++.++||+.. ....++. -.|.++||.|+....-+
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~---------~~l~~~f~~~~~~~~~~----------------- 138 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEK---------LGLIDYFDAIVDPAEIK----------------- 138 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHh---------cCcHhhCcEEEehhhcC-----------------
Confidence 3458999999999999999999999853 3444433 34889999988654211
Q ss_pred ceecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccccccCceEEee
Q 010218 290 LMRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALI 347 (515)
Q Consensus 290 ~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aI 347 (515)
..+| +..+|. ...+.++...++++||||+. .||..+++ .||+|++|
T Consensus 139 ~~kp-----~p~~~~-----~~~~~~~~~~~~~v~vgD~~-~di~aA~~-aG~~~i~v 184 (185)
T TIGR01990 139 KGKP-----DPEIFL-----AAAEGLGVSPSECIGIEDAQ-AGIEAIKA-AGMFAVGV 184 (185)
T ss_pred CCCC-----ChHHHH-----HHHHHcCCCHHHeEEEecCH-HHHHHHHH-cCCEEEec
Confidence 0001 122332 45566678888999999996 89998875 69999986
No 34
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=97.80 E-value=3.8e-05 Score=73.76 Aligned_cols=103 Identities=17% Similarity=0.291 Sum_probs=78.2
Q ss_pred cccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeEEEeCCC
Q 010218 209 VEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLYEVVTGE 288 (515)
Q Consensus 209 i~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~~v~~~~ 288 (515)
+...|....+|.++++. .++.++||+.-......+..+ .|..+||.|++...-
T Consensus 96 ~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~---------~l~~~fd~i~~~~~~----------------- 148 (224)
T TIGR02254 96 HQLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKS---------GLFPFFDDIFVSEDA----------------- 148 (224)
T ss_pred CeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHC---------CcHhhcCEEEEcCcc-----------------
Confidence 34567889999999998 899999999999998888753 488899999885421
Q ss_pred CceecccccCCCccccCCCHHHHHHHh-CcCCCcEEEEcCccccchhccccccCceEEeehH
Q 010218 289 GLMRPCFKARTGGLYSGGSAQMIENSL-NIHGDEILYVGDHIYTDVSQSKVHLRWRTALICR 349 (515)
Q Consensus 289 g~~~~~~~l~~g~vY~gGn~~~l~~ll-~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aIVp 349 (515)
|..+| ...+| ....+.+ |....+++||||+...||..+++ .||.++.+-+
T Consensus 149 ~~~KP-----~~~~~-----~~~~~~~~~~~~~~~v~igD~~~~di~~A~~-~G~~~i~~~~ 199 (224)
T TIGR02254 149 GIQKP-----DKEIF-----NYALERMPKFSKEEVLMIGDSLTADIKGGQN-AGLDTCWMNP 199 (224)
T ss_pred CCCCC-----CHHHH-----HHHHHHhcCCCchheEEECCCcHHHHHHHHH-CCCcEEEECC
Confidence 11111 12233 3555566 88888999999999899998876 5999999855
No 35
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=97.77 E-value=6.4e-05 Score=74.36 Aligned_cols=102 Identities=20% Similarity=0.210 Sum_probs=76.0
Q ss_pred ccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEE--ccCCCCCCCCCCCeEEEeCC
Q 010218 210 EPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIV--SARKPEFFQMSHPLYEVVTG 287 (515)
Q Consensus 210 ~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv--~A~KP~FF~~~~pf~~v~~~ 287 (515)
..-|+...+|.+|+++|.++.++||++-..+..++.+.-. .++.+|||.++. -+.||
T Consensus 95 ~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~------~~L~~~f~~~fd~~~g~KP--------------- 153 (220)
T TIGR01691 95 HLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDA------GNLTPYFSGYFDTTVGLKT--------------- 153 (220)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccc------cchhhhcceEEEeCcccCC---------------
Confidence 4568899999999999999999999999999998887531 246666664321 01122
Q ss_pred CCceecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccccccCceEEeehHh
Q 010218 288 EGLMRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALICRE 350 (515)
Q Consensus 288 ~g~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aIVpE 350 (515)
. -.......+.+|....++|||||+. .||..++. .||+|+++++.
T Consensus 154 -----------~-----p~~y~~i~~~lgv~p~e~lfVgDs~-~Di~AA~~-AG~~ti~v~r~ 198 (220)
T TIGR01691 154 -----------E-----AQSYVKIAGQLGSPPREILFLSDII-NELDAARK-AGLHTGQLVRP 198 (220)
T ss_pred -----------C-----HHHHHHHHHHhCcChhHEEEEeCCH-HHHHHHHH-cCCEEEEEECC
Confidence 1 1223566777898889999999995 89888775 79999999754
No 36
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=97.75 E-value=5.6e-05 Score=72.83 Aligned_cols=106 Identities=24% Similarity=0.368 Sum_probs=79.8
Q ss_pred ccccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeEEEeCC
Q 010218 208 FVEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLYEVVTG 287 (515)
Q Consensus 208 Yi~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~~v~~~ 287 (515)
.+..-|.....|.++++. .++.++||+.-..+.....-+ | ..++||.|++....
T Consensus 97 ~~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~-------g--l~~~Fd~v~~s~~~---------------- 150 (229)
T COG1011 97 LLPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQL-------G--LLDYFDAVFISEDV---------------- 150 (229)
T ss_pred hCccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHc-------C--ChhhhheEEEeccc----------------
Confidence 445567788888888777 789999999877777777754 2 78999999986543
Q ss_pred CCceecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccccccCceEEeehHhh
Q 010218 288 EGLMRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALICREL 351 (515)
Q Consensus 288 ~g~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aIVpEL 351 (515)
|..+| ...+| ..+++.+|....++++|||++..||..++. .||+|+.|.++-
T Consensus 151 -g~~KP-----~~~~f-----~~~~~~~g~~p~~~l~VgD~~~~di~gA~~-~G~~~vwi~~~~ 202 (229)
T COG1011 151 -GVAKP-----DPEIF-----EYALEKLGVPPEEALFVGDSLENDILGARA-LGMKTVWINRGG 202 (229)
T ss_pred -ccCCC-----CcHHH-----HHHHHHcCCCcceEEEECCChhhhhHHHHh-cCcEEEEECCCC
Confidence 22222 22344 357778888888999999999999987765 699999887654
No 37
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=97.71 E-value=4.9e-05 Score=70.95 Aligned_cols=100 Identities=16% Similarity=0.214 Sum_probs=74.4
Q ss_pred ccccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeEEEeCC
Q 010218 208 FVEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLYEVVTG 287 (515)
Q Consensus 208 Yi~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~~v~~~ 287 (515)
.+...|.+..+|..|+++|.++.++||+ ..++.+++.+ .|.+|||.|++....+
T Consensus 86 ~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~---------~l~~~f~~v~~~~~~~--------------- 139 (185)
T TIGR02009 86 GAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKL---------GLTDYFDAIVDADEVK--------------- 139 (185)
T ss_pred CCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHc---------ChHHHCCEeeehhhCC---------------
Confidence 3667889999999999999999999999 6677777643 4889999998753211
Q ss_pred CCceecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccccccCceEEee
Q 010218 288 EGLMRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALI 347 (515)
Q Consensus 288 ~g~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aI 347 (515)
..+| ...+| ....+-+|....+++||||.. .||..+++ .||+|++|
T Consensus 140 --~~kp-----~~~~~-----~~~~~~~~~~~~~~v~IgD~~-~di~aA~~-~G~~~i~v 185 (185)
T TIGR02009 140 --EGKP-----HPETF-----LLAAELLGVSPNECVVFEDAL-AGVQAARA-AGMFAVAV 185 (185)
T ss_pred --CCCC-----ChHHH-----HHHHHHcCCCHHHeEEEeCcH-hhHHHHHH-CCCeEeeC
Confidence 0011 11223 355666788888999999995 79998876 59999875
No 38
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.69 E-value=6.1e-05 Score=64.85 Aligned_cols=113 Identities=25% Similarity=0.314 Sum_probs=80.2
Q ss_pred cccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeEEEeCCC
Q 010218 209 VEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLYEVVTGE 288 (515)
Q Consensus 209 i~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~~v~~~~ 288 (515)
+...|.+..+|.+++++|.+++++||+...++...++.+ .+..+|+.|++....+.+-.......
T Consensus 23 ~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~---------~~~~~~~~i~~~~~~~~~~~~~~~~~------ 87 (139)
T cd01427 23 LELYPGVKEALKELKEKGIKLALATNKSRREVLELLEEL---------GLDDYFDPVITSNGAAIYYPKEGLFL------ 87 (139)
T ss_pred CCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHc---------CCchhhhheeccchhhhhcccccccc------
Confidence 455688999999999999999999999999988888753 26688998887776654433221110
Q ss_pred CceecccccCCCcccc----CCCHHHHHHHhCcCCCcEEEEcCccccchhccccccCceEEee
Q 010218 289 GLMRPCFKARTGGLYS----GGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALI 347 (515)
Q Consensus 289 g~~~~~~~l~~g~vY~----gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aI 347 (515)
+ ...+.. .+....+.+.++....+++||||+. +|+...+. .||+|++|
T Consensus 88 ~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~igD~~-~d~~~~~~-~g~~~i~v 139 (139)
T cd01427 88 G---------GGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSL-NDIEMAKA-AGGLGVAV 139 (139)
T ss_pred c---------ccccccCCCCHHHHHHHHHHcCCChhhEEEeCCCH-HHHHHHHH-cCCceeeC
Confidence 0 011111 1222356666677778999999999 99988874 49999875
No 39
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=97.65 E-value=8.1e-05 Score=76.04 Aligned_cols=105 Identities=12% Similarity=0.171 Sum_probs=77.4
Q ss_pred cccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeEEEeCCC
Q 010218 209 VEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLYEVVTGE 288 (515)
Q Consensus 209 i~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~~v~~~~ 288 (515)
+..-|.+..+|..|++.|.++.++||+.-.+++.++..+. +..|.++|++| .... +
T Consensus 143 ~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~------~~~~~~~~~~v-~~~~-------------~---- 198 (286)
T PLN02779 143 LPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLL------GPERAQGLDVF-AGDD-------------V---- 198 (286)
T ss_pred CCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhc------cccccCceEEE-eccc-------------c----
Confidence 4567889999999999999999999999999999988664 24577788876 2210 0
Q ss_pred CceecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccccccCceEEeehH
Q 010218 289 GLMRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALICR 349 (515)
Q Consensus 289 g~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aIVp 349 (515)
+..+| ...+ .....+.+|....+++||||.+ .||..++. .||++++|..
T Consensus 199 ~~~KP-----~p~~-----~~~a~~~~~~~p~~~l~IGDs~-~Di~aA~~-aG~~~i~v~~ 247 (286)
T PLN02779 199 PKKKP-----DPDI-----YNLAAETLGVDPSRCVVVEDSV-IGLQAAKA-AGMRCIVTKS 247 (286)
T ss_pred CCCCC-----CHHH-----HHHHHHHhCcChHHEEEEeCCH-HhHHHHHH-cCCEEEEEcc
Confidence 10111 1111 2355667788889999999998 69998876 6999998854
No 40
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=97.64 E-value=7.2e-05 Score=70.42 Aligned_cols=102 Identities=21% Similarity=0.367 Sum_probs=72.0
Q ss_pred cccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeEEEeCCC
Q 010218 209 VEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLYEVVTGE 288 (515)
Q Consensus 209 i~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~~v~~~~ 288 (515)
+...|.+..+|.+|+ +++.++||++-..+...+..+ .+.++||.|++...-..-.
T Consensus 83 ~~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~---------gl~~~fd~i~~~~~~~~~~------------- 137 (184)
T TIGR01993 83 LKPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRL---------GIEDCFDGIFCFDTANPDY------------- 137 (184)
T ss_pred CCCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHc---------CcHhhhCeEEEeecccCcc-------------
Confidence 446778899999987 469999999999998888754 3888999988764321000
Q ss_pred CceecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccccccCceEEee
Q 010218 289 GLMRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALI 347 (515)
Q Consensus 289 g~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aI 347 (515)
+..+| ...+| ....+.+|....+++||||+. .||..+++ .|++|++|
T Consensus 138 ~~~KP-----~p~~~-----~~~~~~~~~~~~~~l~vgD~~-~di~aA~~-~G~~~i~v 184 (184)
T TIGR01993 138 LLPKP-----SPQAY-----EKALREAGVDPERAIFFDDSA-RNIAAAKA-LGMKTVLV 184 (184)
T ss_pred CCCCC-----CHHHH-----HHHHHHhCCCccceEEEeCCH-HHHHHHHH-cCCEEeeC
Confidence 00011 11233 345566788889999999997 58877765 69999875
No 41
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=97.63 E-value=0.00014 Score=74.10 Aligned_cols=100 Identities=15% Similarity=0.222 Sum_probs=77.7
Q ss_pred cccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeEEEeCCC
Q 010218 209 VEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLYEVVTGE 288 (515)
Q Consensus 209 i~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~~v~~~~ 288 (515)
+..-|....+|..|+++|.++.++||+.-.+++.+++.+ .|.++||.|++....+ +
T Consensus 141 ~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~---------gl~~~F~~vi~~~~~~-------~-------- 196 (273)
T PRK13225 141 LQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQ---------GLRSLFSVVQAGTPIL-------S-------- 196 (273)
T ss_pred CCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc---------CChhheEEEEecCCCC-------C--------
Confidence 456789999999999999999999999999999998754 3899999887642110 0
Q ss_pred CceecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccccccCceEEeehH
Q 010218 289 GLMRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALICR 349 (515)
Q Consensus 289 g~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aIVp 349 (515)
+..+ ...+++.++....+++||||.+ .||..++. .||+|++|..
T Consensus 197 ----------k~~~-----~~~~l~~~~~~p~~~l~IGDs~-~Di~aA~~-AG~~~I~v~~ 240 (273)
T PRK13225 197 ----------KRRA-----LSQLVAREGWQPAAVMYVGDET-RDVEAARQ-VGLIAVAVTW 240 (273)
T ss_pred ----------CHHH-----HHHHHHHhCcChhHEEEECCCH-HHHHHHHH-CCCeEEEEec
Confidence 0111 2355566688888999999996 69998876 7999999854
No 42
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.60 E-value=0.00019 Score=72.79 Aligned_cols=102 Identities=19% Similarity=0.263 Sum_probs=76.6
Q ss_pred cccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeEEEeCCC
Q 010218 209 VEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLYEVVTGE 288 (515)
Q Consensus 209 i~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~~v~~~~ 288 (515)
...-|....+|..|+++|.++.++||++-.+...++..+ .|..+||.|++...-| .
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~---------~i~~~f~~i~~~d~~~---------------~ 155 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQM---------KIGRYFRWIIGGDTLP---------------Q 155 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHc---------CcHhhCeEEEecCCCC---------------C
Confidence 345688999999999999999999999988888777753 3788999876642100 0
Q ss_pred CceecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccccccCceEEeeh
Q 010218 289 GLMRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALIC 348 (515)
Q Consensus 289 g~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aIV 348 (515)
+ +| + ..-...+.+.+|....+++||||+ ..||...+. .||+|++|.
T Consensus 156 ~--Kp-----~-----p~~~~~~~~~~g~~~~~~l~IGD~-~~Di~aA~~-aGi~~i~v~ 201 (272)
T PRK13223 156 K--KP-----D-----PAALLFVMKMAGVPPSQSLFVGDS-RSDVLAAKA-AGVQCVALS 201 (272)
T ss_pred C--CC-----C-----cHHHHHHHHHhCCChhHEEEECCC-HHHHHHHHH-CCCeEEEEe
Confidence 0 11 1 112345667778888999999999 699998876 699999984
No 43
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=97.58 E-value=8.9e-05 Score=69.96 Aligned_cols=95 Identities=24% Similarity=0.326 Sum_probs=65.7
Q ss_pred cCCCchHHHHHHHHhCceEEEEcCCC-chhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeEEEeCCCC
Q 010218 211 PDPELPLALLDQKEAGKKLLLITNSD-YHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLYEVVTGEG 289 (515)
Q Consensus 211 kd~~l~~~L~~lr~~GKklFLlTNS~-~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~~v~~~~g 289 (515)
.-|....+|..|++.|.+++++||++ -..+..+... + ++..+ ....||
T Consensus 44 ~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~-~--------gl~~~-----~~~~KP----------------- 92 (170)
T TIGR01668 44 AYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKA-L--------GIPVL-----PHAVKP----------------- 92 (170)
T ss_pred cChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHH-c--------CCEEE-----cCCCCC-----------------
Confidence 45678899999999999999999998 4544443332 1 12111 111122
Q ss_pred ceecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccccccCceEEeehHhh
Q 010218 290 LMRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALICREL 351 (515)
Q Consensus 290 ~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aIVpEL 351 (515)
++. .....++-+|...++++||||+++.||..++. .||.|++|-+.-
T Consensus 93 ---------~p~-----~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~-aGi~~i~v~~g~ 139 (170)
T TIGR01668 93 ---------PGC-----AFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNR-NGSYTILVEPLV 139 (170)
T ss_pred ---------ChH-----HHHHHHHHcCCCHHHEEEECCcchHHHHHHHH-cCCeEEEEccCc
Confidence 111 23356666788889999999999999998876 699999996654
No 44
>PLN02811 hydrolase
Probab=97.56 E-value=0.00016 Score=70.32 Aligned_cols=101 Identities=16% Similarity=0.197 Sum_probs=67.9
Q ss_pred CCCchHHHHHHHHhCceEEEEcCCCchhhHH-hhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeEEEeCCCCc
Q 010218 212 DPELPLALLDQKEAGKKLLLITNSDYHYTDK-MMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLYEVVTGEGL 290 (515)
Q Consensus 212 d~~l~~~L~~lr~~GKklFLlTNS~~~yt~~-~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~~v~~~~g~ 290 (515)
-|....+|..|++.|.++.++||+.-.+... ...+ ..|.++||.|++... | ++ +.
T Consensus 80 ~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~---------~~l~~~f~~i~~~~~-~----------~~----~~ 135 (220)
T PLN02811 80 MPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRH---------GELFSLMHHVVTGDD-P----------EV----KQ 135 (220)
T ss_pred CccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHccc---------HHHHhhCCEEEECCh-h----------hc----cC
Confidence 4788999999999999999999998765443 3222 238899999887541 0 00 00
Q ss_pred eecccccCCCccccCCCHHHHHHHhC---cCCCcEEEEcCccccchhccccccCceEEeeh
Q 010218 291 MRPCFKARTGGLYSGGSAQMIENSLN---IHGDEILYVGDHIYTDVSQSKVHLRWRTALIC 348 (515)
Q Consensus 291 ~~~~~~l~~g~vY~gGn~~~l~~ll~---~~g~~VLY~GDHI~~Di~~skk~~gWrT~aIV 348 (515)
.+| ...+| ....+.+| ....+++||||+. .|+..++. .|++|++|-
T Consensus 136 ~KP-----~p~~~-----~~a~~~~~~~~~~~~~~v~IgDs~-~di~aA~~-aG~~~i~v~ 184 (220)
T PLN02811 136 GKP-----APDIF-----LAAARRFEDGPVDPGKVLVFEDAP-SGVEAAKN-AGMSVVMVP 184 (220)
T ss_pred CCC-----CcHHH-----HHHHHHhCCCCCCccceEEEeccH-hhHHHHHH-CCCeEEEEe
Confidence 011 11222 12333343 6678999999998 58887765 699999984
No 45
>PRK11587 putative phosphatase; Provisional
Probab=97.50 E-value=0.00031 Score=68.22 Aligned_cols=97 Identities=13% Similarity=0.126 Sum_probs=69.7
Q ss_pred cccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEcc----CCCCCCCCCCCeEEE
Q 010218 209 VEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSA----RKPEFFQMSHPLYEV 284 (515)
Q Consensus 209 i~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A----~KP~FF~~~~pf~~v 284 (515)
+..-|....+|..|+++|.++.++||+....+....... .+ .+||.|++.. .||
T Consensus 82 ~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~---------~l-~~~~~i~~~~~~~~~KP------------ 139 (218)
T PRK11587 82 ITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAA---------GL-PAPEVFVTAERVKRGKP------------ 139 (218)
T ss_pred ceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhc---------CC-CCccEEEEHHHhcCCCC------------
Confidence 345688999999999999999999999988776655422 13 4577766531 122
Q ss_pred eCCCCceecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccccccCceEEeeh
Q 010218 285 VTGEGLMRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALIC 348 (515)
Q Consensus 285 ~~~~g~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aIV 348 (515)
...+| ....+.+|....+++||||+. .||..++. .|+.|++|-
T Consensus 140 --------------~p~~~-----~~~~~~~g~~p~~~l~igDs~-~di~aA~~-aG~~~i~v~ 182 (218)
T PRK11587 140 --------------EPDAY-----LLGAQLLGLAPQECVVVEDAP-AGVLSGLA-AGCHVIAVN 182 (218)
T ss_pred --------------CcHHH-----HHHHHHcCCCcccEEEEecch-hhhHHHHH-CCCEEEEEC
Confidence 11122 244556788889999999995 68887764 699999984
No 46
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=97.43 E-value=0.00019 Score=71.02 Aligned_cols=98 Identities=23% Similarity=0.305 Sum_probs=69.5
Q ss_pred cccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeEEEeCCC
Q 010218 209 VEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLYEVVTGE 288 (515)
Q Consensus 209 i~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~~v~~~~ 288 (515)
+..-|....+|.+|++. .++.++||++.. ++ ...+.+|||.||+...-.
T Consensus 112 ~~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~---------~~gl~~~fd~i~~~~~~~---------------- 160 (238)
T PRK10748 112 IDVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PE---------LFGLGDYFEFVLRAGPHG---------------- 160 (238)
T ss_pred CCCCccHHHHHHHHHcC-CCEEEEECCCch-----HH---------HCCcHHhhceeEecccCC----------------
Confidence 45668899999999875 679999998765 11 124889999988654210
Q ss_pred CceecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccccccCceEEeehH
Q 010218 289 GLMRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALICR 349 (515)
Q Consensus 289 g~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aIVp 349 (515)
..+| +..+| ....+.+|....+++||||++..||..++. .||+|+.|-+
T Consensus 161 -~~KP-----~p~~~-----~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~-aG~~~i~v~~ 209 (238)
T PRK10748 161 -RSKP-----FSDMY-----HLAAEKLNVPIGEILHVGDDLTTDVAGAIR-CGMQACWINP 209 (238)
T ss_pred -cCCC-----cHHHH-----HHHHHHcCCChhHEEEEcCCcHHHHHHHHH-CCCeEEEEcC
Confidence 0011 11122 233455678888999999999999998876 6999999855
No 47
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=97.42 E-value=0.00026 Score=67.74 Aligned_cols=110 Identities=15% Similarity=0.094 Sum_probs=72.0
Q ss_pred cCCCchHHHHHHHHhCceEEEEcCC-CchhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeEEEeCCCC
Q 010218 211 PDPELPLALLDQKEAGKKLLLITNS-DYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLYEVVTGEG 289 (515)
Q Consensus 211 kd~~l~~~L~~lr~~GKklFLlTNS-~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~~v~~~~g 289 (515)
.-|....+|..|+++|.+++++||+ .-.++..+|.++--...+...+.-++||.||+.. +| +
T Consensus 46 l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~-~~----------------~ 108 (174)
T TIGR01685 46 LIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIY-KP----------------N 108 (174)
T ss_pred EcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeeeecc-CC----------------c
Confidence 3478899999999999999999999 9999999988752000011112228999998853 22 0
Q ss_pred ceecccccCCCccccCCCHHHHHHHh--CcCCCcEEEEcCccccchhccccccCceEEeehH
Q 010218 290 LMRPCFKARTGGLYSGGSAQMIENSL--NIHGDEILYVGDHIYTDVSQSKVHLRWRTALICR 349 (515)
Q Consensus 290 ~~~~~~~l~~g~vY~gGn~~~l~~ll--~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aIVp 349 (515)
...+. ..+ +..+.+.+ |..-.+++||||.. .||..++ ..|++|++|..
T Consensus 109 ~~kp~-----~~i-----~~~~~~~~~~gl~p~e~l~VgDs~-~di~aA~-~aGi~~i~v~~ 158 (174)
T TIGR01685 109 KAKQL-----EMI-----LQKVNKVDPSVLKPAQILFFDDRT-DNVREVW-GYGVTSCYCPS 158 (174)
T ss_pred hHHHH-----HHH-----HHHhhhcccCCCCHHHeEEEcChh-HhHHHHH-HhCCEEEEcCC
Confidence 00000 000 22233333 56678999999999 5566655 57999999843
No 48
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=97.32 E-value=0.00037 Score=65.57 Aligned_cols=107 Identities=21% Similarity=0.214 Sum_probs=70.5
Q ss_pred ccccCCCchHHHHHHHHhCceEEEEcCCC---------------chhhHHhhcccccccCCCCCCCCCCccEEEEccCCC
Q 010218 208 FVEPDPELPLALLDQKEAGKKLLLITNSD---------------YHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKP 272 (515)
Q Consensus 208 Yi~kd~~l~~~L~~lr~~GKklFLlTNS~---------------~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP 272 (515)
.+..-|....+|.+|+++|.+++++||.. ..+++.+...+ ++. ||-+++.+.+|
T Consensus 27 ~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~---------gl~--fd~ii~~~~~~ 95 (161)
T TIGR01261 27 KLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQ---------GII--FDDVLICPHFP 95 (161)
T ss_pred HeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHC---------CCc--eeEEEECCCCC
Confidence 45567889999999999999999999963 33444444422 243 87666553333
Q ss_pred CCCCCCCCeEEEeCCCCceecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccccccCceEEeehH
Q 010218 273 EFFQMSHPLYEVVTGEGLMRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALICR 349 (515)
Q Consensus 273 ~FF~~~~pf~~v~~~~g~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aIVp 349 (515)
. + +.+..+| .-+-+..+.+.++....+++||||. ..|+..++. .||.|++|-+
T Consensus 96 ~---~---------~~~~~KP----------~~~~~~~~~~~~~~~~~e~l~IGD~-~~Di~~A~~-aGi~~i~~~~ 148 (161)
T TIGR01261 96 D---D---------NCDCRKP----------KIKLLEPYLKKNLIDKARSYVIGDR-ETDMQLAEN-LGIRGIQYDE 148 (161)
T ss_pred C---C---------CCCCCCC----------CHHHHHHHHHHcCCCHHHeEEEeCC-HHHHHHHHH-CCCeEEEECh
Confidence 1 0 0010111 0122345566677777899999998 679998875 6999999854
No 49
>PRK06769 hypothetical protein; Validated
Probab=97.23 E-value=0.0004 Score=65.76 Aligned_cols=96 Identities=18% Similarity=0.195 Sum_probs=62.1
Q ss_pred cCCCchHHHHHHHHhCceEEEEcCCCch---------hhHHhhcccccccCCCCCCCCCCccEEEE-----ccCCCCCCC
Q 010218 211 PDPELPLALLDQKEAGKKLLLITNSDYH---------YTDKMMQHSFNRFLPNDMGWRDLFNMVIV-----SARKPEFFQ 276 (515)
Q Consensus 211 kd~~l~~~L~~lr~~GKklFLlTNS~~~---------yt~~~M~yl~~~~~~~g~dWrd~FDvVIv-----~A~KP~FF~ 276 (515)
.-|....+|.+|++.|.+++++||+.-. +... +... | +.++|+.++. ..+||
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~-l~~~-------g--~~~~~~~~~~~~~~~~~~KP---- 94 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQE-LKGF-------G--FDDIYLCPHKHGDGCECRKP---- 94 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHH-HHhC-------C--cCEEEECcCCCCCCCCCCCC----
Confidence 4588999999999999999999999742 2211 1110 1 2122211110 11222
Q ss_pred CCCCeEEEeCCCCceecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccccccCceEEeehH
Q 010218 277 MSHPLYEVVTGEGLMRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALICR 349 (515)
Q Consensus 277 ~~~pf~~v~~~~g~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aIVp 349 (515)
. -+......+.++..-.+++||||+. .|+..++. .||.|++|-+
T Consensus 95 ----------------------~-----p~~~~~~~~~l~~~p~~~i~IGD~~-~Di~aA~~-aGi~~i~v~~ 138 (173)
T PRK06769 95 ----------------------S-----TGMLLQAAEKHGLDLTQCAVIGDRW-TDIVAAAK-VNATTILVRT 138 (173)
T ss_pred ----------------------C-----HHHHHHHHHHcCCCHHHeEEEcCCH-HHHHHHHH-CCCeEEEEec
Confidence 1 1223455566787778999999997 89998875 6999999965
No 50
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=97.21 E-value=0.0006 Score=62.58 Aligned_cols=104 Identities=19% Similarity=0.290 Sum_probs=63.7
Q ss_pred ccCCCchHHHHHHHHhCceEEEEcCCCc---------------hhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCC
Q 010218 210 EPDPELPLALLDQKEAGKKLLLITNSDY---------------HYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEF 274 (515)
Q Consensus 210 ~kd~~l~~~L~~lr~~GKklFLlTNS~~---------------~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~F 274 (515)
...|....+|..|++.|.++.++||++. ..+..+++.+ .+. |+.++...-.|.
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~--~~~~~~~~~~~~- 94 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQL---------GVA--VDGVLFCPHHPA- 94 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhC---------CCc--eeEEEECCCCCC-
Confidence 3568899999999999999999999873 3334444332 121 111111110000
Q ss_pred CCCCCCeEEEeCCCCceecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccccccCceEEeeh
Q 010218 275 FQMSHPLYEVVTGEGLMRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALIC 348 (515)
Q Consensus 275 F~~~~pf~~v~~~~g~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aIV 348 (515)
...+..+| + -+-+..+.+.+|....+++||||+ ..||..++ ..||+|++|.
T Consensus 95 -----------~~~~~~KP-----~-----~~~~~~~~~~~~~~~~e~i~IGDs-~~Di~~A~-~~Gi~~v~i~ 145 (147)
T TIGR01656 95 -----------DNCSCRKP-----K-----PGLILEALKRLGVDASRSLVVGDR-LRDLQAAR-NAGLAAVLLV 145 (147)
T ss_pred -----------CCCCCCCC-----C-----HHHHHHHHHHcCCChHHEEEEcCC-HHHHHHHH-HCCCCEEEec
Confidence 00000011 1 112345566678888899999999 88999886 4699999984
No 51
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=97.17 E-value=0.00054 Score=64.99 Aligned_cols=93 Identities=28% Similarity=0.408 Sum_probs=66.5
Q ss_pred CCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccE-EEEccCCCCCCCCCCCeEEEeCCCCc
Q 010218 212 DPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNM-VIVSARKPEFFQMSHPLYEVVTGEGL 290 (515)
Q Consensus 212 d~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDv-VIv~A~KP~FF~~~~pf~~v~~~~g~ 290 (515)
.|++..|+..+|++|-|+++++|-.=.=+.. |-.-||+ -|-.|+||.
T Consensus 48 tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~---------------~~~~l~v~fi~~A~KP~----------------- 95 (175)
T COG2179 48 TPELRAWLAELKEAGIKVVVVSNNKESRVAR---------------AAEKLGVPFIYRAKKPF----------------- 95 (175)
T ss_pred CHHHHHHHHHHHhcCCEEEEEeCCCHHHHHh---------------hhhhcCCceeecccCcc-----------------
Confidence 4789999999999999999999944332222 2222332 255788871
Q ss_pred eecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccccccCceEEeehHhh
Q 010218 291 MRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALICREL 351 (515)
Q Consensus 291 ~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aIVpEL 351 (515)
+=......+-++..-++|+.|||.||.||+..+. .|.||++|.|=-
T Consensus 96 --------------~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr-~G~~tIlV~Pl~ 141 (175)
T COG2179 96 --------------GRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNR-AGMRTILVEPLV 141 (175)
T ss_pred --------------HHHHHHHHHHcCCChhHEEEEcchhhhhhhcccc-cCcEEEEEEEec
Confidence 0011234455677789999999999999998875 699999998843
No 52
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=97.13 E-value=0.00064 Score=61.84 Aligned_cols=86 Identities=26% Similarity=0.349 Sum_probs=62.8
Q ss_pred CCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeEEEeCCCCcee
Q 010218 213 PELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLYEVVTGEGLMR 292 (515)
Q Consensus 213 ~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~~v~~~~g~~~ 292 (515)
|.+..+|..|++.|.++.++||+....+...+.+.+ .++|+.|++... + + -+
T Consensus 67 ~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~l----------~~~f~~i~~~~~-~----------------~-~K 118 (154)
T TIGR01549 67 RGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKHL----------GDYFDLILGSDE-F----------------G-AK 118 (154)
T ss_pred cCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHHH----------HhcCcEEEecCC-C----------------C-CC
Confidence 679999999999999999999999999999888653 246888775321 0 0 00
Q ss_pred cccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhcccc
Q 010218 293 PCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKV 338 (515)
Q Consensus 293 ~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk 338 (515)
| .+ .....+++.+|... +++||||+ -.|+..++.
T Consensus 119 p-----~~-----~~~~~~~~~~~~~~-~~l~iGDs-~~Di~aa~~ 152 (154)
T TIGR01549 119 P-----EP-----EIFLAALESLGLPP-EVLHVGDN-LNDIEGARN 152 (154)
T ss_pred c-----CH-----HHHHHHHHHcCCCC-CEEEEeCC-HHHHHHHHH
Confidence 1 11 11345566678877 99999999 789887653
No 53
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=97.00 E-value=0.0012 Score=62.44 Aligned_cols=108 Identities=24% Similarity=0.323 Sum_probs=65.6
Q ss_pred cCCCchHHHHHHHHhCceEEEEcCCCc----hhhH-------HhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCC
Q 010218 211 PDPELPLALLDQKEAGKKLLLITNSDY----HYTD-------KMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSH 279 (515)
Q Consensus 211 kd~~l~~~L~~lr~~GKklFLlTNS~~----~yt~-------~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~ 279 (515)
.-|....+|.+|++.|.++.++||++- .|+. .-+..++.. ..+ +||-|++...-+.
T Consensus 30 ~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~g~--~f~~i~~~~~~~~------ 96 (181)
T PRK08942 30 PIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLAD-----RGG--RLDGIYYCPHHPE------ 96 (181)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH-----cCC--ccceEEECCCCCC------
Confidence 457889999999999999999999973 1221 112222310 112 4776664321100
Q ss_pred CeEEEeCCCCceecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccccccCceEEeehH
Q 010218 280 PLYEVVTGEGLMRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALICR 349 (515)
Q Consensus 280 pf~~v~~~~g~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aIVp 349 (515)
.+.+..+| ...+| ....+.+|....+++||||+. .||..++. .||++++|-.
T Consensus 97 ------~~~~~~KP-----~p~~~-----~~~~~~l~~~~~~~~~VgDs~-~Di~~A~~-aG~~~i~v~~ 148 (181)
T PRK08942 97 ------DGCDCRKP-----KPGML-----LSIAERLNIDLAGSPMVGDSL-RDLQAAAA-AGVTPVLVRT 148 (181)
T ss_pred ------CCCcCCCC-----CHHHH-----HHHHHHcCCChhhEEEEeCCH-HHHHHHHH-CCCeEEEEcC
Confidence 00010111 11122 345566788889999999997 59998875 6998888743
No 54
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=96.93 E-value=0.0019 Score=70.20 Aligned_cols=99 Identities=15% Similarity=0.093 Sum_probs=71.8
Q ss_pred ccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeEEEeCCCC
Q 010218 210 EPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLYEVVTGEG 289 (515)
Q Consensus 210 ~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~~v~~~~g 289 (515)
..-|....+|..|++.|.++.++||+.-.++...++++ +|.+|||.|++.-.-+ +
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~---------~l~~~f~~i~~~d~v~----------------~ 384 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYY---------DLDQWVTETFSIEQIN----------------S 384 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHC---------CcHhhcceeEecCCCC----------------C
Confidence 34578899999999999999999999999999999864 4899999988743100 0
Q ss_pred ceecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccccccCceEEeehH
Q 010218 290 LMRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALICR 349 (515)
Q Consensus 290 ~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aIVp 349 (515)
+ + ++.+| ....+- ...++++||||+. .||..+|. .|++|++|-.
T Consensus 385 ~--~-----kP~~~-----~~al~~--l~~~~~v~VGDs~-~Di~aAk~-AG~~~I~v~~ 428 (459)
T PRK06698 385 L--N-----KSDLV-----KSILNK--YDIKEAAVVGDRL-SDINAAKD-NGLIAIGCNF 428 (459)
T ss_pred C--C-----CcHHH-----HHHHHh--cCcceEEEEeCCH-HHHHHHHH-CCCeEEEEeC
Confidence 0 0 11111 111111 2346899999997 99998865 6999999854
No 55
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=96.91 E-value=0.00075 Score=60.82 Aligned_cols=85 Identities=20% Similarity=0.189 Sum_probs=63.0
Q ss_pred CCCchHHHHHHHHhCceEEEEcCC-CchhhHHhhcccccccCCCC--CCCCCCccEEEEccCCCCCCCCCCCeEEEeCCC
Q 010218 212 DPELPLALLDQKEAGKKLLLITNS-DYHYTDKMMQHSFNRFLPND--MGWRDLFNMVIVSARKPEFFQMSHPLYEVVTGE 288 (515)
Q Consensus 212 d~~l~~~L~~lr~~GKklFLlTNS-~~~yt~~~M~yl~~~~~~~g--~dWrd~FDvVIv~A~KP~FF~~~~pf~~v~~~~ 288 (515)
-|.+..+|..|+++|.++.++||+ .-.++..++...-. .+ ..+.++||.+++...||
T Consensus 31 ~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~----~~~i~~l~~~f~~~~~~~~~p---------------- 90 (128)
T TIGR01681 31 IKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFED----FGIIFPLAEYFDPLTIGYWLP---------------- 90 (128)
T ss_pred HHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccc----cccchhhHhhhhhhhhcCCCc----------------
Confidence 367889999999999999999999 89999988875420 01 01688999988875554
Q ss_pred CceecccccCCCccccCCCHHHHHHHhC--cCCCcEEEEcCcccc
Q 010218 289 GLMRPCFKARTGGLYSGGSAQMIENSLN--IHGDEILYVGDHIYT 331 (515)
Q Consensus 289 g~~~~~~~l~~g~vY~gGn~~~l~~ll~--~~g~~VLY~GDHI~~ 331 (515)
++.. .....+.+| +...+++||||....
T Consensus 91 ----------kp~~-----~~~a~~~lg~~~~p~~~l~igDs~~n 120 (128)
T TIGR01681 91 ----------KSPR-----LVEIALKLNGVLKPKSILFVDDRPDN 120 (128)
T ss_pred ----------HHHH-----HHHHHHHhcCCCCcceEEEECCCHhH
Confidence 1111 235566678 888999999998753
No 56
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=96.86 E-value=0.0018 Score=61.77 Aligned_cols=85 Identities=19% Similarity=0.250 Sum_probs=63.1
Q ss_pred hHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeEEEeCCCCceeccc
Q 010218 216 PLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLYEVVTGEGLMRPCF 295 (515)
Q Consensus 216 ~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~~v~~~~g~~~~~~ 295 (515)
..+|..|++.|.++.++||++-.++..+++.+ .|..+||.|++...-+ . +|
T Consensus 112 ~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~---------gl~~~f~~~~~~~~~~----------------~--KP-- 162 (197)
T TIGR01548 112 KGLLRELHRAPKGMAVVTGRPRKDAAKFLTTH---------GLEILFPVQIWMEDCP----------------P--KP-- 162 (197)
T ss_pred HHHHHHHHHcCCcEEEECCCCHHHHHHHHHHc---------CchhhCCEEEeecCCC----------------C--Cc--
Confidence 78889999999999999999999999998854 3889999888743311 0 11
Q ss_pred ccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhcccc
Q 010218 296 KARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKV 338 (515)
Q Consensus 296 ~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk 338 (515)
+..+ .....+.+|....+++||||.. .||..+++
T Consensus 163 ---~p~~-----~~~~~~~~~~~~~~~i~vGD~~-~Di~aA~~ 196 (197)
T TIGR01548 163 ---NPEP-----LILAAKALGVEACHAAMVGDTV-DDIITGRK 196 (197)
T ss_pred ---CHHH-----HHHHHHHhCcCcccEEEEeCCH-HHHHHHHh
Confidence 1111 2344556788888999999998 58887654
No 57
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=96.77 E-value=0.0028 Score=67.09 Aligned_cols=110 Identities=24% Similarity=0.343 Sum_probs=67.5
Q ss_pred cccCCCchHHHHHHHHhCceEEEEcCCC----chhhHH-------hhcccccccCCCCCCCCCCccEEEEccCCCCCCCC
Q 010218 209 VEPDPELPLALLDQKEAGKKLLLITNSD----YHYTDK-------MMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQM 277 (515)
Q Consensus 209 i~kd~~l~~~L~~lr~~GKklFLlTNS~----~~yt~~-------~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~ 277 (515)
+...|.+..+|..|+++|.+++++||.+ -.|... .|.-++. ...+ +||.|++.+..| ++
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~-----~~gl--~fd~i~i~~~~~---sd 98 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFE-----SQGI--KFDEVLICPHFP---ED 98 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHH-----HcCC--ceeeEEEeCCcC---cc
Confidence 5567889999999999999999999951 111111 1222231 1123 377776654333 10
Q ss_pred CCCeEEEeCCCCceecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccccccCceEEeehH
Q 010218 278 SHPLYEVVTGEGLMRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALICR 349 (515)
Q Consensus 278 ~~pf~~v~~~~g~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aIVp 349 (515)
. .+.-+| .-+-+....+.++....+++||||.. +|+..++. .||+++.|=|
T Consensus 99 ~---------~~~rKP----------~p~~l~~a~~~l~v~~~~svmIGDs~-sDi~aAk~-aGi~~I~v~~ 149 (354)
T PRK05446 99 N---------CSCRKP----------KTGLVEEYLAEGAIDLANSYVIGDRE-TDVQLAEN-MGIKGIRYAR 149 (354)
T ss_pred c---------CCCCCC----------CHHHHHHHHHHcCCCcccEEEEcCCH-HHHHHHHH-CCCeEEEEEC
Confidence 0 000011 01223344455677789999999985 89998875 6999999833
No 58
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=96.65 E-value=0.0037 Score=59.00 Aligned_cols=113 Identities=21% Similarity=0.242 Sum_probs=65.5
Q ss_pred cCCCchHHHHHHHHhCceEEEEcCCCc----hhhHHh-------hcccccccCCCCCCCCCCccEEEEccCCCCCCCCCC
Q 010218 211 PDPELPLALLDQKEAGKKLLLITNSDY----HYTDKM-------MQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSH 279 (515)
Q Consensus 211 kd~~l~~~L~~lr~~GKklFLlTNS~~----~yt~~~-------M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~ 279 (515)
.-|....+|.+|+++|.++.++||++- .|+... |..++. ..+-. ||.|+....-|. +.
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~------~~~~~-~~~i~~~~~~~~----~~ 95 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLA------ERDVD-LDGIYYCPHHPE----GV 95 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHH------HcCCC-ccEEEECCCCCc----cc
Confidence 357899999999999999999999984 233321 112221 11112 666655432210 00
Q ss_pred CeEEEeCCCCceecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccccccCceEEeeh
Q 010218 280 PLYEVVTGEGLMRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALIC 348 (515)
Q Consensus 280 pf~~v~~~~g~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aIV 348 (515)
+ ++..+.+..+| +..+ +....+.+|....+++||||.. .||..++. .||+|+..|
T Consensus 96 ~--~~~~~~~~~KP-----~p~~-----~~~a~~~~~~~~~~~v~VGDs~-~Di~aA~~-aG~~~~i~v 150 (176)
T TIGR00213 96 E--EFRQVCDCRKP-----KPGM-----LLQARKELHIDMAQSYMVGDKL-EDMQAGVA-AKVKTNVLV 150 (176)
T ss_pred c--cccCCCCCCCC-----CHHH-----HHHHHHHcCcChhhEEEEcCCH-HHHHHHHH-CCCcEEEEE
Confidence 0 00001111111 1122 2355666788889999999986 69998875 699994433
No 59
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=96.63 E-value=0.0036 Score=59.10 Aligned_cols=103 Identities=18% Similarity=0.277 Sum_probs=64.5
Q ss_pred CcccccccCCCchHHHHHHHHhCceEEEEcCCCch------------hhHHhhcccccccCCCCCCCCCCccEEEEccCC
Q 010218 204 KPELFVEPDPELPLALLDQKEAGKKLLLITNSDYH------------YTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARK 271 (515)
Q Consensus 204 np~kYi~kd~~l~~~L~~lr~~GKklFLlTNS~~~------------yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~K 271 (515)
+|++....-|.+..+|.+|+++|.++.++||.+-. .+..++..+ | +. +|.+|+.. .
T Consensus 36 ~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~-------g--l~--~~~ii~~~-~ 103 (166)
T TIGR01664 36 SASDWRFLYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKL-------K--VP--IQVLAATH-A 103 (166)
T ss_pred ChHHeEEecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHc-------C--CC--EEEEEecC-C
Confidence 45554444588999999999999999999998753 334444432 1 32 24444432 1
Q ss_pred CCCCCCCCCeEEEeCCCCceecccccCCCccccCCCHHHHHHHhC--cCCCcEEEEcCcc-------ccchhccccccCc
Q 010218 272 PEFFQMSHPLYEVVTGEGLMRPCFKARTGGLYSGGSAQMIENSLN--IHGDEILYVGDHI-------YTDVSQSKVHLRW 342 (515)
Q Consensus 272 P~FF~~~~pf~~v~~~~g~~~~~~~l~~g~vY~gGn~~~l~~ll~--~~g~~VLY~GDHI-------~~Di~~skk~~gW 342 (515)
.. .. +| + .+....+.+.+| +...+++||||.. -.|+..++. .|+
T Consensus 104 -~~-------------~~--KP-----~-----p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~-aGi 156 (166)
T TIGR01664 104 -GL-------------YR--KP-----M-----TGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKN-LGL 156 (166)
T ss_pred -CC-------------CC--CC-----c-----cHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHH-CCC
Confidence 00 00 01 0 122345556666 7778999999986 389998875 577
Q ss_pred eEE
Q 010218 343 RTA 345 (515)
Q Consensus 343 rT~ 345 (515)
.++
T Consensus 157 ~~~ 159 (166)
T TIGR01664 157 EFK 159 (166)
T ss_pred CcC
Confidence 764
No 60
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=96.46 E-value=0.075 Score=55.65 Aligned_cols=106 Identities=14% Similarity=0.162 Sum_probs=65.8
Q ss_pred cccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeEEEeCCC
Q 010218 209 VEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLYEVVTGE 288 (515)
Q Consensus 209 i~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~~v~~~~ 288 (515)
+...|....+|..+++.|.++.++||+...|++.+...+ + +|-++.+ ..++. .
T Consensus 180 l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~L-g------------ld~~~an------------~lei~--d 232 (322)
T PRK11133 180 LPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKL-R------------LDAAVAN------------ELEIM--D 232 (322)
T ss_pred CCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHc-C------------CCeEEEe------------EEEEE--C
Confidence 446788899999999999999999999999988777643 2 1222221 11221 1
Q ss_pred CceecccccCCCccccCCCHHHHH---HHhCcCCCcEEEEcCccccchhccccccCceEE
Q 010218 289 GLMRPCFKARTGGLYSGGSAQMIE---NSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTA 345 (515)
Q Consensus 289 g~~~~~~~l~~g~vY~gGn~~~l~---~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~ 345 (515)
|.+..... ...+...+....+. +-+|....++++|||.. .|+.-.+. .|.-.+
T Consensus 233 g~ltg~v~--g~iv~~k~K~~~L~~la~~lgi~~~qtIaVGDg~-NDl~m~~~-AGlgiA 288 (322)
T PRK11133 233 GKLTGNVL--GDIVDAQYKADTLTRLAQEYEIPLAQTVAIGDGA-NDLPMIKA-AGLGIA 288 (322)
T ss_pred CEEEeEec--CccCCcccHHHHHHHHHHHcCCChhhEEEEECCH-HHHHHHHH-CCCeEE
Confidence 22211000 01122334454444 45577778999999999 89986654 466443
No 61
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=96.45 E-value=0.00093 Score=67.20 Aligned_cols=101 Identities=14% Similarity=0.099 Sum_probs=68.6
Q ss_pred CchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEcc-CCCCCCCCCCCeEEEeCCCCcee
Q 010218 214 ELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSA-RKPEFFQMSHPLYEVVTGEGLMR 292 (515)
Q Consensus 214 ~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A-~KP~FF~~~~pf~~v~~~~g~~~ 292 (515)
.+...+..|++.|+++|+.||++-.+....... ..+-.+|+.|.... ++|.++....
T Consensus 124 ~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~---------~g~g~~~~~i~~~~~~~~~~~gKP~------------- 181 (257)
T TIGR01458 124 ILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLA---------LDVGPFVTALEYATDTKATVVGKPS------------- 181 (257)
T ss_pred HHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCC---------CCchHHHHHHHHHhCCCceeecCCC-------------
Confidence 455566777778889999999998887654432 23678888776532 2332221111
Q ss_pred cccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccccccCceEEeehH
Q 010218 293 PCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALICR 349 (515)
Q Consensus 293 ~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aIVp 349 (515)
..+| ....+.+|....++++|||++..||..++. .||+|++|-.
T Consensus 182 -------p~~~-----~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~-~G~~~i~v~~ 225 (257)
T TIGR01458 182 -------KTFF-----LEALRATGCEPEEAVMIGDDCRDDVGGAQD-CGMRGIQVRT 225 (257)
T ss_pred -------HHHH-----HHHHHHhCCChhhEEEECCCcHHHHHHHHH-cCCeEEEECC
Confidence 1122 133445577789999999999999998875 5999999953
No 62
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=96.35 E-value=0.015 Score=54.73 Aligned_cols=109 Identities=17% Similarity=0.144 Sum_probs=69.5
Q ss_pred ccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeEEEeCCCC
Q 010218 210 EPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLYEVVTGEG 289 (515)
Q Consensus 210 ~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~~v~~~~g 289 (515)
...|....+|..+++.|.+++++||+.-.++..++..+ | ...+|+.++.... -++++. .+.....
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~-------g--~~~~~~~~~~~~~-~g~~~p-~~~~~~~---- 144 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKL-------N--PDYVYSNELVFDE-KGFIQP-DGIVRVT---- 144 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHh-------C--CCeEEEEEEEEcC-CCeEec-ceeeEEc----
Confidence 45678899999999999999999999999999998865 1 3456665554321 111110 0110000
Q ss_pred ceecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccccccCceEEe
Q 010218 290 LMRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTAL 346 (515)
Q Consensus 290 ~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~a 346 (515)
+ ..++ .-...+.+.+|....+++||||+. .|+-..+. .||..++
T Consensus 145 ---~---~~k~-----~~~~~~~~~~~~~~~~~i~iGDs~-~D~~~a~~-ag~~~a~ 188 (201)
T TIGR01491 145 ---F---DNKG-----EAVERLKRELNPSLTETVAVGDSK-NDLPMFEV-ADISISL 188 (201)
T ss_pred ---c---ccHH-----HHHHHHHHHhCCCHHHEEEEcCCH-hHHHHHHh-cCCeEEE
Confidence 0 0011 113344555677778999999994 69987765 5885544
No 63
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=96.02 E-value=0.015 Score=53.56 Aligned_cols=86 Identities=13% Similarity=0.038 Sum_probs=61.6
Q ss_pred cccccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEcc----CCCCCCCCCCCeE
Q 010218 207 LFVEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSA----RKPEFFQMSHPLY 282 (515)
Q Consensus 207 kYi~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A----~KP~FF~~~~pf~ 282 (515)
-++..-|.+..+|..|+ .|.++.++||+.-+|+..+++.+- ..| .+||.|++.. .||.
T Consensus 42 ~~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~-------~~~-~~f~~i~~~~d~~~~KP~--------- 103 (148)
T smart00577 42 VYVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLD-------PKK-YFGYRRLFRDECVFVKGK--------- 103 (148)
T ss_pred EEEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhC-------cCC-CEeeeEEECccccccCCe---------
Confidence 45566799999999998 578999999999999999988652 223 5679887754 3332
Q ss_pred EEeCCCCceecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhcc
Q 010218 283 EVVTGEGLMRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQS 336 (515)
Q Consensus 283 ~v~~~~g~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~s 336 (515)
| ..-.+.+|....+++||||.. .|+...
T Consensus 104 --------------------~-----~k~l~~l~~~p~~~i~i~Ds~-~~~~aa 131 (148)
T smart00577 104 --------------------Y-----VKDLSLLGRDLSNVIIIDDSP-DSWPFH 131 (148)
T ss_pred --------------------E-----eecHHHcCCChhcEEEEECCH-HHhhcC
Confidence 0 011344577788999999997 455444
No 64
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=95.83 E-value=0.011 Score=58.48 Aligned_cols=113 Identities=22% Similarity=0.262 Sum_probs=75.7
Q ss_pred cccccccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeEEE
Q 010218 205 PELFVEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLYEV 284 (515)
Q Consensus 205 p~kYi~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~~v 284 (515)
|=.++.+||.|+.+|..|+..+| .+-||++=.-+..+.+.+- =.|.||.||+- ...+|.
T Consensus 95 Plq~LkPD~~LRnlLL~l~~r~k--~~FTNa~k~HA~r~Lk~LG---------ieDcFegii~~-------e~~np~--- 153 (244)
T KOG3109|consen 95 PLQDLKPDPVLRNLLLSLKKRRK--WIFTNAYKVHAIRILKKLG---------IEDCFEGIICF-------ETLNPI--- 153 (244)
T ss_pred cHhhcCCCHHHHHHHHhCccccE--EEecCCcHHHHHHHHHHhC---------hHHhccceeEe-------eccCCC---
Confidence 44568899999999999998774 5569999999999999873 67899999873 222221
Q ss_pred eCCCCc-eecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccccccCceEEeehHhh
Q 010218 285 VTGEGL-MRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALICREL 351 (515)
Q Consensus 285 ~~~~g~-~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aIVpEL 351 (515)
++-. -+| +.+......+..|...++=.||=|.-.+-|...|. .||+|++|-.|=
T Consensus 154 --~~~~vcKP----------~~~afE~a~k~agi~~p~~t~FfDDS~~NI~~ak~-vGl~tvlv~~~~ 208 (244)
T KOG3109|consen 154 --EKTVVCKP----------SEEAFEKAMKVAGIDSPRNTYFFDDSERNIQTAKE-VGLKTVLVGREH 208 (244)
T ss_pred --CCceeecC----------CHHHHHHHHHHhCCCCcCceEEEcCchhhHHHHHh-ccceeEEEEeee
Confidence 1100 011 11222344455577755444444555678887775 599999997653
No 65
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=95.71 E-value=0.06 Score=51.86 Aligned_cols=106 Identities=17% Similarity=0.150 Sum_probs=67.0
Q ss_pred cccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeEEEeCCC
Q 010218 209 VEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLYEVVTGE 288 (515)
Q Consensus 209 i~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~~v~~~~ 288 (515)
+...|..+.+|..++++|.++.++||+.-.++..++..+ + +..+|+..+... ++. +.... .
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~-~--------i~~~~~~~~~~~-------~~~-~~~~~--~ 144 (219)
T TIGR00338 84 LPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKL-G--------LDAAFANRLEVE-------DGK-LTGLV--E 144 (219)
T ss_pred CCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHc-C--------CCceEeeEEEEE-------CCE-EEEEe--c
Confidence 456789999999999999999999999999998888754 1 344565433221 110 00000 0
Q ss_pred CceecccccCCCccccCCCHHHHH---HHhCcCCCcEEEEcCccccchhccccccCceEE
Q 010218 289 GLMRPCFKARTGGLYSGGSAQMIE---NSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTA 345 (515)
Q Consensus 289 g~~~~~~~l~~g~vY~gGn~~~l~---~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~ 345 (515)
|.. ++..+....+. +.++....+++||||+ .+|+...+. .|+..+
T Consensus 145 ~~~----------~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs-~~Di~aa~~-ag~~i~ 192 (219)
T TIGR00338 145 GPI----------VDASYKGKTLLILLRKEGISPENTVAVGDG-ANDLSMIKA-AGLGIA 192 (219)
T ss_pred Ccc----------cCCcccHHHHHHHHHHcCCCHHHEEEEECC-HHHHHHHHh-CCCeEE
Confidence 100 11122333333 4456667799999999 599987665 488653
No 66
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=95.65 E-value=0.0035 Score=63.61 Aligned_cols=100 Identities=24% Similarity=0.252 Sum_probs=60.7
Q ss_pred CchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEc-cCCCCCCCCCCCeEEEeCCCCcee
Q 010218 214 ELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVS-ARKPEFFQMSHPLYEVVTGEGLMR 292 (515)
Q Consensus 214 ~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~-A~KP~FF~~~~pf~~v~~~~g~~~ 292 (515)
.+...+..|++.|. +|++||.+-.+........+ ..-.+|+.|... .++|.+. |+..
T Consensus 147 ~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~~~~~~~--------~~g~~~~~i~~~~g~~~~~~-------------gKP~ 204 (279)
T TIGR01452 147 KLREACAHLREPGC-LFVATNRDPWHPLSDGSRTP--------GTGSLVAAIETASGRQPLVV-------------GKPS 204 (279)
T ss_pred HHHHHHHHHhcCCC-EEEEeCCCCCCCCcCCCccc--------ChHHHHHHHHHHhCCceecc-------------CCCC
Confidence 45667777887786 89999998665421111111 234566655422 1222111 1100
Q ss_pred cccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccccccCceEEeeh
Q 010218 293 PCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALIC 348 (515)
Q Consensus 293 ~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aIV 348 (515)
+ .+ .....+.+|....++++|||.+..||..++. .||+|++|-
T Consensus 205 p-------~~-----~~~~~~~~~~~~~~~lmIGD~~~tDI~~A~~-aGi~si~V~ 247 (279)
T TIGR01452 205 P-------YM-----FECITENFSIDPARTLMVGDRLETDILFGHR-CGMTTVLVL 247 (279)
T ss_pred H-------HH-----HHHHHHHhCCChhhEEEECCChHHHHHHHHH-cCCcEEEEC
Confidence 0 01 1234555677788999999999999998875 699999983
No 67
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=95.34 E-value=0.12 Score=50.78 Aligned_cols=102 Identities=18% Similarity=0.278 Sum_probs=73.2
Q ss_pred ccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeEEEeCCCC
Q 010218 210 EPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLYEVVTGEG 289 (515)
Q Consensus 210 ~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~~v~~~~g 289 (515)
..-|.+..+|..|++.|.++-+.|||+-.-+..+++-+ .=.+|||.||+.+.=+ .+
T Consensus 86 ~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~---------gl~~~f~~~v~~~dv~---------------~~ 141 (221)
T COG0637 86 KPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARL---------GLLDYFDVIVTADDVA---------------RG 141 (221)
T ss_pred CCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHc---------cChhhcchhccHHHHh---------------cC
Confidence 35578999999999999999999999988888777533 2467999988765321 11
Q ss_pred ceecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccccccCceEEeehH
Q 010218 290 LMRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALICR 349 (515)
Q Consensus 290 ~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aIVp 349 (515)
+| .+-+|. .-.+.||....+++.|.|...|= . +-+..|-+++.|..
T Consensus 142 --KP-----~Pd~yL-----~Aa~~Lgv~P~~CvviEDs~~Gi-~-Aa~aAGm~vv~v~~ 187 (221)
T COG0637 142 --KP-----APDIYL-----LAAERLGVDPEECVVVEDSPAGI-Q-AAKAAGMRVVGVPA 187 (221)
T ss_pred --CC-----CCHHHH-----HHHHHcCCChHHeEEEecchhHH-H-HHHHCCCEEEEecC
Confidence 11 223442 23456788889999999999883 3 33457999999864
No 68
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=95.32 E-value=0.035 Score=55.74 Aligned_cols=107 Identities=10% Similarity=0.073 Sum_probs=65.6
Q ss_pred hhHHHHHcCcccccccCCCchHHHHHHHHhCceEEEEcCC----CchhhHHhhcccccccCCCCCCCCCCccEEEEccCC
Q 010218 196 QLKSEIMSKPELFVEPDPELPLALLDQKEAGKKLLLITNS----DYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARK 271 (515)
Q Consensus 196 ~lk~~v~~np~kYi~kd~~l~~~L~~lr~~GKklFLlTNS----~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~K 271 (515)
.+.....+.-+....+-+....+|..++++|.++|++||. .=.+++.++..+- +.++|++|+....-
T Consensus 100 ~~w~~~~~~~~~~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lG---------i~~~f~~i~~~d~~ 170 (237)
T TIGR01672 100 VFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFH---------IPAMNPVIFAGDKP 170 (237)
T ss_pred HHHHHHHHhcccCCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhC---------CchheeEEECCCCC
Confidence 3344444443444344444889999999999999999998 4457777766442 55799887553211
Q ss_pred CCCCCCCCCeEEEeCCCCceecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccccccCceEEee
Q 010218 272 PEFFQMSHPLYEVVTGEGLMRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALI 347 (515)
Q Consensus 272 P~FF~~~~pf~~v~~~~g~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aI 347 (515)
+. . + +.. ....+-.+ -++||||++ .||..++. .|-++++|
T Consensus 171 ~~---------------~--K------p~~-------~~~l~~~~----i~i~vGDs~-~DI~aAk~-AGi~~I~V 210 (237)
T TIGR01672 171 GQ---------------Y--Q------YTK-------TQWIQDKN----IRIHYGDSD-NDITAAKE-AGARGIRI 210 (237)
T ss_pred CC---------------C--C------CCH-------HHHHHhCC----CeEEEeCCH-HHHHHHHH-CCCCEEEE
Confidence 00 0 0 000 00111112 179999999 89976654 59998887
No 69
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=95.10 E-value=0.066 Score=51.15 Aligned_cols=89 Identities=24% Similarity=0.333 Sum_probs=59.0
Q ss_pred CCCchHHHHHHHHhCc--eEEEEcCCC-------chhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeE
Q 010218 212 DPELPLALLDQKEAGK--KLLLITNSD-------YHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLY 282 (515)
Q Consensus 212 d~~l~~~L~~lr~~GK--klFLlTNS~-------~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~ 282 (515)
.|++..+|.++++.+. ++.+++||- ..-+..+-+ .+ | ..++.-.|+||
T Consensus 61 ~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~-~l------g------Ipvl~h~~kKP---------- 117 (168)
T PF09419_consen 61 PPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEK-AL------G------IPVLRHRAKKP---------- 117 (168)
T ss_pred CHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHH-hh------C------CcEEEeCCCCC----------
Confidence 4678889999998864 699999993 333443333 22 1 44555667887
Q ss_pred EEeCCCCceecccccCCCccccCCCHHHHHHHhCc-----CCCcEEEEcCccccchhccccccCceEEee
Q 010218 283 EVVTGEGLMRPCFKARTGGLYSGGSAQMIENSLNI-----HGDEILYVGDHIYTDVSQSKVHLRWRTALI 347 (515)
Q Consensus 283 ~v~~~~g~~~~~~~l~~g~vY~gGn~~~l~~ll~~-----~g~~VLY~GDHI~~Di~~skk~~gWrT~aI 347 (515)
|+...+.+.++. +-+++..|||.++.||+-.+. .|-.|++|
T Consensus 118 -----------------------~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~-~G~~tilv 163 (168)
T PF09419_consen 118 -----------------------GCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNR-MGSYTILV 163 (168)
T ss_pred -----------------------ccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhc-cCceEEEE
Confidence 222233333332 257899999999999999886 47666654
No 70
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=95.08 E-value=0.087 Score=53.94 Aligned_cols=36 Identities=31% Similarity=0.439 Sum_probs=29.4
Q ss_pred HhCcCCCcEEEEcCccccchhccccccCceEEeehHh
Q 010218 314 SLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALICRE 350 (515)
Q Consensus 314 ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aIVpE 350 (515)
.++...+++|-|||.+.+||...+. .||.|++|.-=
T Consensus 202 ~~~~~~~~~~mVGD~~~TDI~~a~~-~G~~t~LV~TG 237 (269)
T COG0647 202 KLGLDRSEVLMVGDRLDTDILGAKA-AGLDTLLVLTG 237 (269)
T ss_pred HhCCCcccEEEEcCCchhhHHHHHH-cCCCEEEEccC
Confidence 3455556999999999999998875 69999999543
No 71
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=94.95 E-value=0.14 Score=47.46 Aligned_cols=51 Identities=20% Similarity=0.345 Sum_probs=43.2
Q ss_pred cccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEc
Q 010218 209 VEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVS 268 (515)
Q Consensus 209 i~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~ 268 (515)
+...|....+|..|++.|-++.++||+.-.++..++... +|.++||.|++.
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~---------~l~~~f~~i~~~ 121 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGI---------GEKDVFIEIYSN 121 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHc---------CChhheeEEecc
Confidence 445677899999999999999999999999999888753 488999998854
No 72
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=94.94 E-value=0.08 Score=51.54 Aligned_cols=109 Identities=14% Similarity=0.113 Sum_probs=65.0
Q ss_pred cccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeEEEeCCC
Q 010218 209 VEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLYEVVTGE 288 (515)
Q Consensus 209 i~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~~v~~~~ 288 (515)
+...|....+|..++++|.+++++||+.-.|+..++..++. + +.|+++.-. |+.+. . .+.
T Consensus 73 ~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~-------~-----~~i~~n~~~---~~~~~-~-~~~--- 132 (219)
T PRK09552 73 AEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGLIP-------K-----EQIYCNGSD---FSGEY-I-TIT--- 132 (219)
T ss_pred CCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHhCC-------c-----CcEEEeEEE---ecCCe-e-EEe---
Confidence 45678999999999999999999999999999999987641 1 222221100 11100 0 000
Q ss_pred CceecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccccccCc
Q 010218 289 GLMRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRW 342 (515)
Q Consensus 289 g~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gW 342 (515)
.|..........+|-+-....+.++....+|+||||.. +|+..++ ..|.
T Consensus 133 ---kp~p~~~~~~~~~~~~K~~~l~~~~~~~~~~i~iGDs~-~Di~aa~-~Ag~ 181 (219)
T PRK09552 133 ---WPHPCDEHCQNHCGCCKPSLIRKLSDTNDFHIVIGDSI-TDLEAAK-QADK 181 (219)
T ss_pred ---ccCCccccccccCCCchHHHHHHhccCCCCEEEEeCCH-HHHHHHH-HCCc
Confidence 00000000001122233345566677778999999994 5888766 4577
No 73
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=94.83 E-value=0.033 Score=57.84 Aligned_cols=87 Identities=20% Similarity=0.258 Sum_probs=66.9
Q ss_pred CCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcc---cccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeEEEeCCC
Q 010218 212 DPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQH---SFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLYEVVTGE 288 (515)
Q Consensus 212 d~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~y---l~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~~v~~~~ 288 (515)
-|.+..+|..|++.|.++.++||.+...+..++.. ++ ...++|+.|+.. .||
T Consensus 33 ~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~--------~~~~~f~~~~~~-~~p---------------- 87 (320)
T TIGR01686 33 HKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFI--------LQAEDFDARSIN-WGP---------------- 87 (320)
T ss_pred HHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCcccc--------CcHHHeeEEEEe-cCc----------------
Confidence 35788899999999999999999999999999886 22 256899998665 333
Q ss_pred CceecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccccc
Q 010218 289 GLMRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVH 339 (515)
Q Consensus 289 g~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~ 339 (515)
..-+...+.+-+|..-.+++||||+.+ |+...+..
T Consensus 88 ---------------k~~~i~~~~~~l~i~~~~~vfidD~~~-d~~~~~~~ 122 (320)
T TIGR01686 88 ---------------KSESLRKIAKKLNLGTDSFLFIDDNPA-ERANVKIT 122 (320)
T ss_pred ---------------hHHHHHHHHHHhCCCcCcEEEECCCHH-HHHHHHHH
Confidence 022345566667888889999999987 77776653
No 74
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=94.79 E-value=0.013 Score=54.45 Aligned_cols=84 Identities=19% Similarity=0.334 Sum_probs=57.5
Q ss_pred cCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeEEEeCCCCc
Q 010218 211 PDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLYEVVTGEGL 290 (515)
Q Consensus 211 kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~~v~~~~g~ 290 (515)
.-|....+|. ++.++||++-.+....+..+ ...++||.||+.-.- |.
T Consensus 91 ~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~---------~l~~~fd~v~~~~~~-----------------~~ 137 (175)
T TIGR01493 91 PWPDSAAALA-------RVAILSNASHWAFDQFAQQA---------GLPWYFDRAFSVDTV-----------------RA 137 (175)
T ss_pred CCCchHHHHH-------HHhhhhCCCHHHHHHHHHHC---------CCHHHHhhhccHhhc-----------------CC
Confidence 4567777776 37899999999999888754 278899987653210 10
Q ss_pred eecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhcccc
Q 010218 291 MRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKV 338 (515)
Q Consensus 291 ~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk 338 (515)
.+| ...+| ....+.+|....+++|||||. .||..+++
T Consensus 138 ~KP-----~p~~f-----~~~~~~~~~~p~~~l~vgD~~-~Di~~A~~ 174 (175)
T TIGR01493 138 YKP-----DPVVY-----ELVFDTVGLPPDRVLMVAAHQ-WDLIGARK 174 (175)
T ss_pred CCC-----CHHHH-----HHHHHHHCCCHHHeEeEecCh-hhHHHHhc
Confidence 111 12233 245566788889999999994 79987765
No 75
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=94.59 E-value=0.042 Score=51.93 Aligned_cols=82 Identities=24% Similarity=0.411 Sum_probs=61.7
Q ss_pred CCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEccC--CCCCCCCCCCeEEEeCCCC
Q 010218 212 DPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSAR--KPEFFQMSHPLYEVVTGEG 289 (515)
Q Consensus 212 d~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~--KP~FF~~~~pf~~v~~~~g 289 (515)
-|+...+|..|+++|.++.++|+.+...+..+.+.+ | ++|.+|.... ||
T Consensus 129 ~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~l-g-----------i~~~~v~a~~~~kP----------------- 179 (215)
T PF00702_consen 129 RPGAKEALQELKEAGIKVAILTGDNESTASAIAKQL-G-----------IFDSIVFARVIGKP----------------- 179 (215)
T ss_dssp HTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHT-T-----------SCSEEEEESHETTT-----------------
T ss_pred hhhhhhhhhhhhccCcceeeeecccccccccccccc-c-----------cccccccccccccc-----------------
Confidence 478999999999999999999999999999999864 2 1444333333 33
Q ss_pred ceecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccc
Q 010218 290 LMRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSK 337 (515)
Q Consensus 290 ~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~sk 337 (515)
..++| ..+.+.++..+.+|++|||.+ .|+...|
T Consensus 180 ---------~~k~~-----~~~i~~l~~~~~~v~~vGDg~-nD~~al~ 212 (215)
T PF00702_consen 180 ---------EPKIF-----LRIIKELQVKPGEVAMVGDGV-NDAPALK 212 (215)
T ss_dssp ---------HHHHH-----HHHHHHHTCTGGGEEEEESSG-GHHHHHH
T ss_pred ---------cchhH-----HHHHHHHhcCCCEEEEEccCH-HHHHHHH
Confidence 01111 467777898888999999999 9987654
No 76
>PHA02597 30.2 hypothetical protein; Provisional
Probab=94.46 E-value=0.078 Score=50.36 Aligned_cols=101 Identities=11% Similarity=0.102 Sum_probs=64.6
Q ss_pred cccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhccc-ccccCCCCCCCCCCccEEEEccC-CCCCCCCCCCeEEEeC
Q 010218 209 VEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHS-FNRFLPNDMGWRDLFNMVIVSAR-KPEFFQMSHPLYEVVT 286 (515)
Q Consensus 209 i~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl-~~~~~~~g~dWrd~FDvVIv~A~-KP~FF~~~~pf~~v~~ 286 (515)
+..-|....+|.+|++.++ ++++||..-.........+ +. .-|-++|+.||+... ||. |
T Consensus 73 ~~~~pG~~e~L~~L~~~~~-~~i~Tn~~~~~~~~~~~~~~l~------~~f~~~f~~i~~~~~~~~k------p------ 133 (197)
T PHA02597 73 LSAYDDALDVINKLKEDYD-FVAVTALGDSIDALLNRQFNLN------ALFPGAFSEVLMCGHDESK------E------ 133 (197)
T ss_pred ccCCCCHHHHHHHHHhcCC-EEEEeCCccchhHHHHhhCCHH------HhCCCcccEEEEeccCccc------H------
Confidence 4457889999999998875 7788997766555444332 21 224457777765433 220 0
Q ss_pred CCCceecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhcccccc-CceEEeehHh
Q 010218 287 GEGLMRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHL-RWRTALICRE 350 (515)
Q Consensus 287 ~~g~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~-gWrT~aIVpE 350 (515)
.+ .....+.+| ..+++||||...+ +..++... |+.|+.+-..
T Consensus 134 --------------~~-----~~~a~~~~~--~~~~v~vgDs~~d-i~aA~~a~~Gi~~i~~~~~ 176 (197)
T PHA02597 134 --------------KL-----FIKAKEKYG--DRVVCFVDDLAHN-LDAAHEALSQLPVIHMLRG 176 (197)
T ss_pred --------------HH-----HHHHHHHhC--CCcEEEeCCCHHH-HHHHHHHHcCCcEEEecch
Confidence 01 223344445 4569999999988 77776533 9999998555
No 77
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=94.25 E-value=0.018 Score=57.04 Aligned_cols=99 Identities=18% Similarity=0.176 Sum_probs=61.6
Q ss_pred CCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeEEEeCCCCcee
Q 010218 213 PELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLYEVVTGEGLMR 292 (515)
Q Consensus 213 ~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~~v~~~~g~~~ 292 (515)
|.+..+|..+++.|.++ ++||.+..|....+.. + +.-.+|+.|...+.+|.+. |+..
T Consensus 141 ~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~-~--------~~g~~~~~i~~~g~~~~~~-------------gKP~ 197 (242)
T TIGR01459 141 DEFDELFAPIVARKIPN-ICANPDRGINQHGIYR-Y--------GAGYYAELIKQLGGKVIYS-------------GKPY 197 (242)
T ss_pred HHHHHHHHHHHhCCCcE-EEECCCEeccCCCceE-e--------cccHHHHHHHHhCCcEecC-------------CCCC
Confidence 45566677777788874 8999999999766542 2 1334666543222233211 1111
Q ss_pred cccccCCCccccCCCHHHHHHHhCcC-CCcEEEEcCccccchhccccccCceEEee
Q 010218 293 PCFKARTGGLYSGGSAQMIENSLNIH-GDEILYVGDHIYTDVSQSKVHLRWRTALI 347 (515)
Q Consensus 293 ~~~~l~~g~vY~gGn~~~l~~ll~~~-g~~VLY~GDHI~~Di~~skk~~gWrT~aI 347 (515)
+ .+ .....+.+|.. ..+++||||.+..||..++. .||+|++|
T Consensus 198 ~-------~~-----~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~-~G~~~i~v 240 (242)
T TIGR01459 198 P-------AI-----FHKALKECSNIPKNRMLMVGDSFYTDILGANR-LGIDTALV 240 (242)
T ss_pred H-------HH-----HHHHHHHcCCCCcccEEEECCCcHHHHHHHHH-CCCeEEEE
Confidence 1 11 12344445544 35899999999999998875 69999987
No 78
>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=94.20 E-value=0.00048 Score=73.10 Aligned_cols=239 Identities=9% Similarity=-0.181 Sum_probs=146.6
Q ss_pred CCCCeeEecCccccCCCcEEEEecccceeccCccchHHHHHHHHHHHHHhcCCCCCCC--CCCccccccceEeecCCCcE
Q 010218 23 NSPRGIFCSRTLNLRSISAIGYDMDYTLMHYNVMAWEGRAYDYCMVNLRNMGFPVEGL--AFDPDLVIRGLVIDKEKGNL 100 (515)
Q Consensus 23 ~~~~~VF~nr~l~L~~i~~iGFDmDyTLa~Y~~~~~e~L~y~~~~~~Lv~~gYP~~~l--~ydp~F~iRGL~~D~~~Gnl 100 (515)
..+-.++++++|... +.+.+++++|++. |..+..+.+.|.+--..|...++|...+ .+++-++++|+.++...++.
T Consensus 38 L~~Y~~~~~esLay~-~~~~~l~~~Gyp~-~ll~~~~d~~f~~rGL~ld~~~GN~lKld~~~~vl~a~hg~rfls~~~~~ 115 (424)
T KOG2469|consen 38 LARYNLPEMESLAYD-LAQFLLKDKGYPN-ELLSTSFDWNFPCRGLVLDKERGNLLKLDRFGYVLRAAHGTRFLSNEEIS 115 (424)
T ss_pred hhhhcccchHHHHHH-HHHHHHHhcCChh-hhhccccCccceeeeeEEeccCCceeeeeccCceeeeccccccccccchh
Confidence 456679999999999 9999999999998 7666555555544333455678886655 47999999999999999999
Q ss_pred EeecCCCcEEEEEecCccCCH--HHHHHHhcCeeccccccccceechhhhchhHHHHHHHHHHHHhhCCCCCCCCCCChH
Q 010218 101 VKADRFGYVKRAMHGTTMLSN--RAVSEMYGRELVDLRKESRWEFLNTLFSVSEAVAYMQMVNRLDEGAIGPELGPLDYK 178 (515)
Q Consensus 101 LKvD~~g~I~~a~hG~~~ls~--~Ei~~~Y~~~~i~~~~~~r~~~l~tlFslpe~~L~a~lVd~~d~~~~~~~~~~~~y~ 178 (515)
.+.++++ -.+++ -.+. ++..+.. ..++-.+.+|+...+++..+ +.....+.. ...++
T Consensus 116 eiyg~~~---------~~~~~~~~~~l----~t~F~~~-----ea~~~aq~vd~~d~~~~~~~--~~~dyk~~~-~~v~~ 174 (424)
T KOG2469|consen 116 EIYGRKL---------VRLSDSRYYLL----NTLFSMP-----EADLFAQAVDFLDNGPEYGP--VDMDYKPGW-KDVRA 174 (424)
T ss_pred hhccccc---------ccccCchhhhh----hhhhhch-----hHHHHHhhcchhhcCCccCc--cchhhcchH-HHHHH
Confidence 9999888 12222 1111 1212211 12222333333333333211 111111111 23366
Q ss_pred HHHHHHHHHHHhccchhhhHHHHHcCcccccccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhh-c---ccc----cc
Q 010218 179 GLYKAVGKALFRAHVEGQLKSEIMSKPELFVEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMM-Q---HSF----NR 250 (515)
Q Consensus 179 ~l~~dv~~av~~vH~~G~lk~~v~~np~kYi~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M-~---yl~----~~ 250 (515)
+++.+..++.-..|+.|...+.|..+ ++++- .+..+.-.-+..--+ +.++.||++.-+++..| . |.. +.
T Consensus 175 ~~~~~h~~~~lk~~~~~~pek~V~~d-~~~v~-~l~~~r~sGKk~fl~-Tns~~~ytd~~mt~~~~~dW~~yfd~v~~~a 251 (424)
T KOG2469|consen 175 AGNAVHLYGLLKKKMMGKPERYVVYD-GTIVP-LLSMLRDSGKKTFLH-TNSDWDYTDIFMAFHYGFDWETYFDLVETRA 251 (424)
T ss_pred HHhHHHHHHHHHHHHhcCCCceeeec-Ccccc-chHHHHhhccceEEe-eccccchhhHHHHHHhCCCcceeEEEEEEec
Confidence 88888888988999999997766555 45554 555444444444555 48999999999999999 2 211 10
Q ss_pred cCC--CCCCCCCCccEEEEccCCCCCCCCCCCeEEEeCCCC
Q 010218 251 FLP--NDMGWRDLFNMVIVSARKPEFFQMSHPLYEVVTGEG 289 (515)
Q Consensus 251 ~~~--~g~dWrd~FDvVIv~A~KP~FF~~~~pf~~v~~~~g 289 (515)
..| .++. .-+++ |.+++.||.==+...|..+....+|
T Consensus 252 ~Kp~ff~e~-~vlre-V~t~~g~l~~g~~~~p~e~~~~ySg 290 (424)
T KOG2469|consen 252 AKPGFFHEG-TVLRE-VEPQEGLLKNGDNTGPLEQGGVYSG 290 (424)
T ss_pred cCCcccccc-ceeee-eccccccccccccCCcchhcccCCc
Confidence 011 1122 22233 4577777754445556655555444
No 79
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=93.96 E-value=0.053 Score=51.62 Aligned_cols=110 Identities=16% Similarity=0.193 Sum_probs=74.6
Q ss_pred HHHhccchhhhHHHHH-cCcccccccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEE
Q 010218 187 ALFRAHVEGQLKSEIM-SKPELFVEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMV 265 (515)
Q Consensus 187 av~~vH~~G~lk~~v~-~np~kYi~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvV 265 (515)
.+|-|+.+|++.=.-. +.+.+|=.+|. .-+.+|+++|.++.++||.+..+++..+..+- +.++|+.+
T Consensus 13 d~dGv~tdg~~~~~~~g~~~~~~~~~D~---~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lg---------i~~~f~~~ 80 (169)
T TIGR02726 13 DVDGVMTDGRIVINDEGIESRNFDIKDG---MGVIVLQLCGIDVAIITSKKSGAVRHRAEELK---------IKRFHEGI 80 (169)
T ss_pred eCceeeECCeEEEcCCCcEEEEEecchH---HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCC---------CcEEEecC
Confidence 3577888886521111 11334444443 35677889999999999999999999999873 66777732
Q ss_pred EEccCCCCCCCCCCCeEEEeCCCCceecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccccccCceEE
Q 010218 266 IVSARKPEFFQMSHPLYEVVTGEGLMRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTA 345 (515)
Q Consensus 266 Iv~A~KP~FF~~~~pf~~v~~~~g~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~ 345 (515)
|| +.. ....+.+.++....+++||||.. .|+.-.+. .|+.-+
T Consensus 81 -----kp--------------------------kp~-----~~~~~~~~l~~~~~ev~~iGD~~-nDi~~~~~-ag~~~a 122 (169)
T TIGR02726 81 -----KK--------------------------KTE-----PYAQMLEEMNISDAEVCYVGDDL-VDLSMMKR-VGLAVA 122 (169)
T ss_pred -----CC--------------------------CHH-----HHHHHHHHcCcCHHHEEEECCCH-HHHHHHHH-CCCeEE
Confidence 11 101 23456667788888999999997 79987765 576654
Q ss_pred e
Q 010218 346 L 346 (515)
Q Consensus 346 a 346 (515)
.
T Consensus 123 m 123 (169)
T TIGR02726 123 V 123 (169)
T ss_pred C
Confidence 3
No 80
>PLN02954 phosphoserine phosphatase
Probab=93.71 E-value=0.32 Score=46.98 Aligned_cols=37 Identities=11% Similarity=0.183 Sum_probs=33.9
Q ss_pred cCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhccc
Q 010218 211 PDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHS 247 (515)
Q Consensus 211 kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl 247 (515)
..|....+|..++++|.++.++||+.-.++..++..+
T Consensus 85 l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~ 121 (224)
T PLN02954 85 LSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAIL 121 (224)
T ss_pred CCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHh
Confidence 4689999999999999999999999999999998864
No 81
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=93.00 E-value=0.1 Score=48.49 Aligned_cols=83 Identities=12% Similarity=0.145 Sum_probs=58.7
Q ss_pred HHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeEEEeCCCCceeccccc
Q 010218 218 ALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLYEVVTGEGLMRPCFKA 297 (515)
Q Consensus 218 ~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~~v~~~~g~~~~~~~l 297 (515)
.+.+|+++|.+++++||.+...+..++..+- +.++|+. .||
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~g---------i~~~~~~-----~~~------------------------- 76 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLG---------ITHLYQG-----QSN------------------------- 76 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcC---------CCEEEec-----ccc-------------------------
Confidence 5899999999999999999998888776542 4455541 111
Q ss_pred CCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccccccCceEEeeh
Q 010218 298 RTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALIC 348 (515)
Q Consensus 298 ~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aIV 348 (515)
+.. -...+++.+|....+++||||+. .|+...+.. |- +++|-
T Consensus 77 -k~~-----~~~~~~~~~~~~~~~~~~vGDs~-~D~~~~~~a-g~-~~~v~ 118 (154)
T TIGR01670 77 -KLI-----AFSDILEKLALAPENVAYIGDDL-IDWPVMEKV-GL-SVAVA 118 (154)
T ss_pred -hHH-----HHHHHHHHcCCCHHHEEEECCCH-HHHHHHHHC-CC-eEecC
Confidence 111 13456666788888999999997 999877653 44 46654
No 82
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=92.99 E-value=0.084 Score=42.90 Aligned_cols=42 Identities=21% Similarity=0.307 Sum_probs=34.5
Q ss_pred HHHHHHhCcCCCcEEEEcCccccchhccccccCceEEeehHhh
Q 010218 309 QMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALICREL 351 (515)
Q Consensus 309 ~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aIVpEL 351 (515)
....+.++....++++|||.+..||...+. .||+|++|---.
T Consensus 11 ~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~-~G~~~ilV~tG~ 52 (75)
T PF13242_consen 11 EQALKRLGVDPSRCVMVGDSLETDIEAAKA-AGIDTILVLTGV 52 (75)
T ss_dssp HHHHHHHTSGGGGEEEEESSTTTHHHHHHH-TTSEEEEESSSS
T ss_pred HHHHHHcCCCHHHEEEEcCCcHhHHHHHHH-cCCcEEEECCCC
Confidence 345666677888999999999999998885 699999996533
No 83
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=92.03 E-value=0.27 Score=46.61 Aligned_cols=106 Identities=14% Similarity=0.158 Sum_probs=63.8
Q ss_pred CCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccE-EEEccCCCCCCCCCCCeEEEeCCCCc
Q 010218 212 DPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNM-VIVSARKPEFFQMSHPLYEVVTGEGL 290 (515)
Q Consensus 212 d~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDv-VIv~A~KP~FF~~~~pf~~v~~~~g~ 290 (515)
.|....++.+++++|.++.++|||+-.++..+++++= +..+|.. ++++-. +.| +|.
T Consensus 89 ~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg---------~~~~~~~~l~~~~~--g~~------------~g~ 145 (202)
T TIGR01490 89 YPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILG---------IDNAIGTRLEESED--GIY------------TGN 145 (202)
T ss_pred cHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcC---------CcceEecceEEcCC--CEE------------eCC
Confidence 4567888899999999999999999999999988641 4445544 211110 000 121
Q ss_pred eecccccCCCccccCCCHHHHHHHh---CcCCCcEEEEcCccccchhccccccCceEEeehH
Q 010218 291 MRPCFKARTGGLYSGGSAQMIENSL---NIHGDEILYVGDHIYTDVSQSKVHLRWRTALICR 349 (515)
Q Consensus 291 ~~~~~~l~~g~vY~gGn~~~l~~ll---~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aIVp 349 (515)
.. ....+..+-...+.+++ +...++++|+||+. +|+--.+. .| ..++|.|
T Consensus 146 ~~------~~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~-~D~~~~~~-a~-~~~~v~~ 198 (202)
T TIGR01490 146 ID------GNNCKGEGKVHALAELLAEEQIDLKDSYAYGDSI-SDLPLLSL-VG-HPYVVNP 198 (202)
T ss_pred cc------CCCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCc-ccHHHHHh-CC-CcEEeCC
Confidence 11 01122233334455555 44556899999999 89865543 33 4445544
No 84
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=91.99 E-value=1 Score=43.64 Aligned_cols=68 Identities=13% Similarity=-0.043 Sum_probs=47.4
Q ss_pred CChHHHHHHHHHHHHhccchhhhHHHHHcCcccccccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhccc
Q 010218 175 LDYKGLYKAVGKALFRAHVEGQLKSEIMSKPELFVEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHS 247 (515)
Q Consensus 175 ~~y~~l~~dv~~av~~vH~~G~lk~~v~~np~kYi~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl 247 (515)
++++..++. -+...+.+. ++++.+-..+.+.-.|....+|..+++.|.++.++|||.-.|+..++..+
T Consensus 40 ~~~~e~~~~---~~~~~~~~~--~~~~~~~~~~~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~ 107 (214)
T TIGR03333 40 LSIQEGVGR---MFGLLPSSL--KEEITSFVLETAEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGI 107 (214)
T ss_pred ccHHHHHHH---HHhhCCCch--HHHHHHHHHhcCcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhh
Confidence 445544433 334444443 23343333334667889999999999999999999999999999998865
No 85
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=91.24 E-value=0.29 Score=50.80 Aligned_cols=70 Identities=23% Similarity=0.296 Sum_probs=56.0
Q ss_pred cchhhhHHHHHcCccccc-ccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEccC
Q 010218 192 HVEGQLKSEIMSKPELFV-EPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSAR 270 (515)
Q Consensus 192 H~~G~lk~~v~~np~kYi-~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~ 270 (515)
..+|+|- .+ ++=| .+||.+..+|..|+++|.++.|+||+.-+++...|+.+ ....|||+||++..
T Consensus 132 DLDgTLi----~~-~~~v~irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~l---------GLd~YFdvIIs~Gd 197 (301)
T TIGR01684 132 DLDSTLI----TD-EEPVRIRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKV---------KLDRYFDIIISGGH 197 (301)
T ss_pred ecCCCCc----CC-CCccccCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHc---------CCCcccCEEEECCc
Confidence 3678773 22 4433 56899999999999999999999999999999888864 37789999999987
Q ss_pred CCCCC
Q 010218 271 KPEFF 275 (515)
Q Consensus 271 KP~FF 275 (515)
...--
T Consensus 198 v~~~k 202 (301)
T TIGR01684 198 KAEEY 202 (301)
T ss_pred cccCC
Confidence 75544
No 86
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=90.88 E-value=0.22 Score=50.53 Aligned_cols=105 Identities=13% Similarity=0.083 Sum_probs=67.1
Q ss_pred CCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCC-CccEEEEccCCCCCCCCCCCeEEEeCCCCc
Q 010218 212 DPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRD-LFNMVIVSARKPEFFQMSHPLYEVVTGEGL 290 (515)
Q Consensus 212 d~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd-~FDvVIv~A~KP~FF~~~~pf~~v~~~~g~ 290 (515)
.|....+|.+|++.|.+++++||.+..++..++.++- +.. +||.|+....-+.|..+.. .++
T Consensus 189 ~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~---------~~~~~f~~i~~~~~~~~~~~~~~--------~~k 251 (300)
T PHA02530 189 NPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLR---------QTDIWFDDLIGRPPDMHFQREQG--------DKR 251 (300)
T ss_pred ChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHH---------HcCCchhhhhCCcchhhhcccCC--------CCC
Confidence 4677889999999999999999999999999999874 343 7998877663222222111 011
Q ss_pred eecccccCCCccccCCCHHHHHHHhCc-CCCcEEEEcCccccchhccccccCceEEee
Q 010218 291 MRPCFKARTGGLYSGGSAQMIENSLNI-HGDEILYVGDHIYTDVSQSKVHLRWRTALI 347 (515)
Q Consensus 291 ~~~~~~l~~g~vY~gGn~~~l~~ll~~-~g~~VLY~GDHI~~Di~~skk~~gWrT~aI 347 (515)
..+ .++. ..+.+ ++. .-.+++||||..+ ||...+ ..|-.+++|
T Consensus 252 p~p-------~~~~----~~l~~-~~~~~~~~~~~vgD~~~-d~~~a~-~~Gi~~i~v 295 (300)
T PHA02530 252 PDD-------VVKE----EIFWE-KIAPKYDVLLAVDDRDQ-VVDMWR-RIGLECWQV 295 (300)
T ss_pred CcH-------HHHH----HHHHH-HhccCceEEEEEcCcHH-HHHHHH-HhCCeEEEe
Confidence 011 0110 12223 344 3478999999954 454443 457777776
No 87
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=90.88 E-value=0.34 Score=50.33 Aligned_cols=69 Identities=22% Similarity=0.265 Sum_probs=54.2
Q ss_pred chhhhHHHHHcCccccc-ccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEccCC
Q 010218 193 VEGQLKSEIMSKPELFV-EPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARK 271 (515)
Q Consensus 193 ~~G~lk~~v~~np~kYi-~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~K 271 (515)
.+|+|-. .++=| .++|....+|.+|+++|.++.++||.+-+++...++.+ ....+||+||+....
T Consensus 135 ~D~TL~~-----~~~~v~irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~l---------gL~~yFDvII~~g~i 200 (303)
T PHA03398 135 LDSTLIT-----DEEPVRIRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKET---------KLEGYFDIIICGGRK 200 (303)
T ss_pred cCCCccC-----CCCccccCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHc---------CCCccccEEEECCCc
Confidence 6777632 23333 56899999999999999999999999999998888854 367999999998775
Q ss_pred CCCC
Q 010218 272 PEFF 275 (515)
Q Consensus 272 P~FF 275 (515)
..--
T Consensus 201 ~~k~ 204 (303)
T PHA03398 201 AGEY 204 (303)
T ss_pred cccc
Confidence 4433
No 88
>PRK08238 hypothetical protein; Validated
Probab=90.06 E-value=0.69 Score=51.10 Aligned_cols=46 Identities=30% Similarity=0.344 Sum_probs=39.6
Q ss_pred CCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEcc
Q 010218 212 DPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSA 269 (515)
Q Consensus 212 d~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A 269 (515)
.|+...+++++++.|.++.++|||+-.+++.+++++- + ||.||..-
T Consensus 74 ~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lG---------l---Fd~Vigsd 119 (479)
T PRK08238 74 NEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLG---------L---FDGVFASD 119 (479)
T ss_pred ChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcC---------C---CCEEEeCC
Confidence 4678889999999999999999999999999999761 2 89888763
No 89
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=89.96 E-value=2.4 Score=39.00 Aligned_cols=39 Identities=13% Similarity=0.141 Sum_probs=34.7
Q ss_pred cccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhccc
Q 010218 209 VEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHS 247 (515)
Q Consensus 209 i~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl 247 (515)
+...|....++..+++.|.++.++|+|.-.|+..++..+
T Consensus 72 ~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~ 110 (177)
T TIGR01488 72 VALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKL 110 (177)
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHc
Confidence 335688999999999999999999999999999998865
No 90
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=89.48 E-value=0.59 Score=52.25 Aligned_cols=36 Identities=25% Similarity=0.295 Sum_probs=30.9
Q ss_pred HcCcccccccCCCchHHHHHHHHhCceEEEEcCCCc
Q 010218 202 MSKPELFVEPDPELPLALLDQKEAGKKLLLITNSDY 237 (515)
Q Consensus 202 ~~np~kYi~kd~~l~~~L~~lr~~GKklFLlTNS~~ 237 (515)
..||+.+....|.++..|.+|+++|.+++++||..-
T Consensus 189 ~~~~~d~~~l~pgV~e~L~~L~~~Gy~IvIvTNQ~g 224 (526)
T TIGR01663 189 PKGPDDWQIIFPEIPEKLKELEADGFKICIFTNQGG 224 (526)
T ss_pred CCCHHHeeecccCHHHHHHHHHHCCCEEEEEECCcc
Confidence 346777766778999999999999999999999766
No 91
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=89.31 E-value=0.3 Score=46.63 Aligned_cols=81 Identities=14% Similarity=0.172 Sum_probs=58.5
Q ss_pred HHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeEEEeCCCCceecccc
Q 010218 217 LALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLYEVVTGEGLMRPCFK 296 (515)
Q Consensus 217 ~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~~v~~~~g~~~~~~~ 296 (515)
..+.++++.|.++.++||.+...+..++..+- +..+|+ +.+|
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lg---------l~~~f~-----g~~~------------------------ 96 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLG---------ITHLYQ-----GQSN------------------------ 96 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcC---------Cceeec-----CCCc------------------------
Confidence 35778888999999999999999999888651 333442 1110
Q ss_pred cCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccccccCceE
Q 010218 297 ARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRT 344 (515)
Q Consensus 297 l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT 344 (515)
+ ...+..+++.+|....+|+||||.+ .|+...+. .|...
T Consensus 97 --k-----~~~l~~~~~~~gl~~~ev~~VGDs~-~D~~~a~~-aG~~~ 135 (183)
T PRK09484 97 --K-----LIAFSDLLEKLAIAPEQVAYIGDDL-IDWPVMEK-VGLSV 135 (183)
T ss_pred --H-----HHHHHHHHHHhCCCHHHEEEECCCH-HHHHHHHH-CCCeE
Confidence 0 1234566677788889999999997 89987775 58773
No 92
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=89.28 E-value=0.31 Score=48.78 Aligned_cols=38 Identities=26% Similarity=0.288 Sum_probs=31.8
Q ss_pred HHHHHhCcCCCcEEEEcCccccchhccccccCceEEeeh
Q 010218 310 MIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALIC 348 (515)
Q Consensus 310 ~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aIV 348 (515)
.+.+.++....++++|||++..||.-+++ .||+|++|-
T Consensus 186 ~~~~~~~~~~~~~~~VGD~~~~Di~~a~~-~G~~~v~v~ 223 (249)
T TIGR01457 186 KAVEHLGTEREETLMVGDNYLTDIRAGID-AGIDTLLVH 223 (249)
T ss_pred HHHHHcCCCcccEEEECCCchhhHHHHHH-cCCcEEEEc
Confidence 34555677788999999999999998876 599999984
No 93
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=88.82 E-value=1.8 Score=41.02 Aligned_cols=37 Identities=16% Similarity=0.300 Sum_probs=32.3
Q ss_pred ccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhccc
Q 010218 210 EPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHS 247 (515)
Q Consensus 210 ~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl 247 (515)
..-|....+|..++++ .++.++||+.-.+++.++..+
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~ 104 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQL 104 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHc
Confidence 3468889999999988 789999999999999988864
No 94
>PRK11590 hypothetical protein; Provisional
Probab=88.08 E-value=1.8 Score=41.91 Aligned_cols=95 Identities=14% Similarity=0.061 Sum_probs=62.4
Q ss_pred ccCCCchHHH-HHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeEEEeCCC
Q 010218 210 EPDPELPLAL-LDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLYEVVTGE 288 (515)
Q Consensus 210 ~kd~~l~~~L-~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~~v~~~~ 288 (515)
..-|.....| ..+++.|.++.++|||+-.|+..++.++- |..-..+|-+ +. ++ ..|
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~---------~~~~~~~i~t---~l----------~~-~~t 151 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTP---------WLPRVNLIAS---QM----------QR-RYG 151 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcc---------ccccCceEEE---EE----------EE-EEc
Confidence 4467888898 56788899999999999999999998753 5443333322 22 12 123
Q ss_pred CceecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchh
Q 010218 289 GLMRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVS 334 (515)
Q Consensus 289 g~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~ 334 (515)
|.+. ....|-.|=+..+.+.+|......-..|||+ +|+-
T Consensus 152 g~~~------g~~c~g~~K~~~l~~~~~~~~~~~~aY~Ds~-~D~p 190 (211)
T PRK11590 152 GWVL------TLRCLGHEKVAQLERKIGTPLRLYSGYSDSK-QDNP 190 (211)
T ss_pred cEEC------CccCCChHHHHHHHHHhCCCcceEEEecCCc-ccHH
Confidence 4322 1224445555677777775555566779999 8874
No 95
>PTZ00445 p36-lilke protein; Provisional
Probab=87.41 E-value=0.67 Score=46.08 Aligned_cols=139 Identities=18% Similarity=0.286 Sum_probs=93.3
Q ss_pred HhccchhhhHHHHHcCccccccc-CCCchHHHHHHHHhCceEEEEcCCCchh--hHH---------hhcccccccCCCCC
Q 010218 189 FRAHVEGQLKSEIMSKPELFVEP-DPELPLALLDQKEAGKKLLLITNSDYHY--TDK---------MMQHSFNRFLPNDM 256 (515)
Q Consensus 189 ~~vH~~G~lk~~v~~np~kYi~k-d~~l~~~L~~lr~~GKklFLlTNS~~~y--t~~---------~M~yl~~~~~~~g~ 256 (515)
=.+|..|...+. +++..++.. .|++..|+.+|+++|-+|.++|=|+=.- .+. +.++++.
T Consensus 55 I~~HsgG~~~~~--~~~~~~~~~~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk------- 125 (219)
T PTZ00445 55 ITKHSGGYIDPD--NDDIRVLTSVTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALK------- 125 (219)
T ss_pred hhhhcccccCCC--cchhhhhccCCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHH-------
Confidence 357888876554 677788775 4789999999999999999999887543 111 3333331
Q ss_pred CCCCCccEEEEccCCCCCCCCCCCeEEEeCCCCceecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhcc
Q 010218 257 GWRDLFNMVIVSARKPEFFQMSHPLYEVVTGEGLMRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQS 336 (515)
Q Consensus 257 dWrd~FDvVIv~A~KP~FF~~~~pf~~v~~~~g~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~s 336 (515)
.=.--|++..|.|-=|.|+.+..-+.++ |..+|-. ..+.| -.+.+++-.|....++|+|=|. -..|..+
T Consensus 126 ~s~~~~~i~~~~~yyp~~w~~p~~y~~~----gl~KPdp---~iK~y---Hle~ll~~~gl~peE~LFIDD~-~~NVeaA 194 (219)
T PTZ00445 126 KSKCDFKIKKVYAYYPKFWQEPSDYRPL----GLDAPMP---LDKSY---HLKQVCSDFNVNPDEILFIDDD-MNNCKNA 194 (219)
T ss_pred hcCccceeeeeeeeCCcccCChhhhhhh----cccCCCc---cchHH---HHHHHHHHcCCCHHHeEeecCC-HHHHHHH
Confidence 1145689999999999999987655443 3233311 11123 0134555567888899999777 4455555
Q ss_pred ccccCceEEeeh
Q 010218 337 KVHLRWRTALIC 348 (515)
Q Consensus 337 kk~~gWrT~aIV 348 (515)
++ .||.|+.+.
T Consensus 195 ~~-lGi~ai~f~ 205 (219)
T PTZ00445 195 LK-EGYIALHVT 205 (219)
T ss_pred HH-CCCEEEEcC
Confidence 54 799999875
No 96
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=86.61 E-value=0.78 Score=45.44 Aligned_cols=50 Identities=24% Similarity=0.268 Sum_probs=37.8
Q ss_pred cCCCchHHHHHHHHhCceEEEEcCCCchhhH--HhhcccccccCCCCCCCCC-CccEEEEcc
Q 010218 211 PDPELPLALLDQKEAGKKLLLITNSDYHYTD--KMMQHSFNRFLPNDMGWRD-LFNMVIVSA 269 (515)
Q Consensus 211 kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~--~~M~yl~~~~~~~g~dWrd-~FDvVIv~A 269 (515)
.-|....+|.+|+++|+++.++||+.-.... ..+..+ .+.. +||.||+.+
T Consensus 25 ~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~---------gl~~~~~~~Ii~s~ 77 (242)
T TIGR01459 25 TYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSL---------GINADLPEMIISSG 77 (242)
T ss_pred cCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHC---------CCCccccceEEccH
Confidence 3578899999999999999999999876654 233322 2455 899988865
No 97
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=86.54 E-value=0.91 Score=42.63 Aligned_cols=55 Identities=15% Similarity=0.083 Sum_probs=46.9
Q ss_pred CcccccccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEE
Q 010218 204 KPELFVEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIV 267 (515)
Q Consensus 204 np~kYi~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv 267 (515)
+..-||.+-|.+..+|..+.+. -.+.+.|++.-.|++.+++.+- .++.+|+.++.
T Consensus 36 ~~~~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ld--------p~~~~f~~~l~ 90 (162)
T TIGR02251 36 IIPVYVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILD--------RGGKVISRRLY 90 (162)
T ss_pred EEEEEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHC--------cCCCEEeEEEE
Confidence 4567889999999999999877 7899999999999999999773 35668887775
No 98
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=86.01 E-value=1.6 Score=43.87 Aligned_cols=106 Identities=13% Similarity=0.193 Sum_probs=66.6
Q ss_pred hhHHHHHcCcccccccCCCchHHHHHHHHhCceEEEEcCCC----chhhHHhhcccccccCCCCCCC-CCCccEEEEccC
Q 010218 196 QLKSEIMSKPELFVEPDPELPLALLDQKEAGKKLLLITNSD----YHYTDKMMQHSFNRFLPNDMGW-RDLFNMVIVSAR 270 (515)
Q Consensus 196 ~lk~~v~~np~kYi~kd~~l~~~L~~lr~~GKklFLlTNS~----~~yt~~~M~yl~~~~~~~g~dW-rd~FDvVIv~A~ 270 (515)
.+.+...++...+..+-|....+|.++++.|.++|+|||.. -..++.++. .++ - | .++|++++....
T Consensus 100 ~fw~~y~~~~~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk-~~g------i-p~~~~f~vil~gd~ 171 (237)
T PRK11009 100 KFWEKMNNGWDEFSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLAD-DFH------I-PADNMNPVIFAGDK 171 (237)
T ss_pred HHHHHHHhcccccCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHH-HcC------C-CcccceeEEEcCCC
Confidence 45555666656666667779999999999999999999953 445566565 221 1 2 568988776442
Q ss_pred CCCCCCCCCCeEEEeCCCCceecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchhccccccCceEEee
Q 010218 271 KPEFFQMSHPLYEVVTGEGLMRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALI 347 (515)
Q Consensus 271 KP~FF~~~~pf~~v~~~~g~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aI 347 (515)
+ .. +.+. ..+. -.+ -++||||++ +|+..++ ..|-+++.|
T Consensus 172 -~---~K---------------------~~K~------~~l~-~~~----i~I~IGDs~-~Di~aA~-~AGi~~I~v 210 (237)
T PRK11009 172 -P---GQ---------------------YTKT------QWLK-KKN----IRIFYGDSD-NDITAAR-EAGARGIRI 210 (237)
T ss_pred -C---CC---------------------CCHH------HHHH-hcC----CeEEEcCCH-HHHHHHH-HcCCcEEEE
Confidence 1 00 0000 0111 122 289999997 4787654 468888876
No 99
>PLN02645 phosphoglycolate phosphatase
Probab=85.60 E-value=0.63 Score=48.19 Aligned_cols=37 Identities=27% Similarity=0.368 Sum_probs=31.5
Q ss_pred HHHHhCcCCCcEEEEcCccccchhccccccCceEEeeh
Q 010218 311 IENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALIC 348 (515)
Q Consensus 311 l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aIV 348 (515)
..+.+|.+..+++||||.+..||.-++. .||+|++|.
T Consensus 239 a~~~~~~~~~~~~~VGD~~~~Di~~A~~-aG~~~ilV~ 275 (311)
T PLN02645 239 LANKFGIEKSQICMVGDRLDTDILFGQN-GGCKTLLVL 275 (311)
T ss_pred HHHHcCCCcccEEEEcCCcHHHHHHHHH-cCCCEEEEc
Confidence 4455677888999999999999998876 599999983
No 100
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=84.04 E-value=3.3 Score=41.72 Aligned_cols=114 Identities=19% Similarity=0.352 Sum_probs=73.3
Q ss_pred ccCCCchHHHHHH--HHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeEEEeCC
Q 010218 210 EPDPELPLALLDQ--KEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLYEVVTG 287 (515)
Q Consensus 210 ~kd~~l~~~L~~l--r~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~~v~~~ 287 (515)
.-+|.++.++..+ ...|-.+.+|++|.--|.+.++.. ..=++.|+=|+++ |..|.++--+ .|.+.
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~---------~gl~~~f~~I~TN---pa~~~~~G~l-~v~py 137 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEH---------HGLRDCFSEIFTN---PACFDADGRL-RVRPY 137 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHh---------CCCccccceEEeC---CceecCCceE-EEeCc
Confidence 3577888888888 356889999999999999999984 3467899998887 4455532111 22222
Q ss_pred CCceecccccCCCccccCCC-H--HHHHHHhC------cCCCcEEEEcCccccchhccccccCceEEe
Q 010218 288 EGLMRPCFKARTGGLYSGGS-A--QMIENSLN------IHGDEILYVGDHIYTDVSQSKVHLRWRTAL 346 (515)
Q Consensus 288 ~g~~~~~~~l~~g~vY~gGn-~--~~l~~ll~------~~g~~VLY~GDHI~~Di~~skk~~gWrT~a 346 (515)
.. +.+. -++-| + ..+.+++. ..-++|+||||- .+|.-.+++...-+.++
T Consensus 138 h~--------h~C~-~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG-~nD~Cp~~~L~~~D~v~ 195 (234)
T PF06888_consen 138 HS--------HGCS-LCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDG-RNDFCPALRLRPRDVVF 195 (234)
T ss_pred cC--------CCCC-cCCCccchHHHHHHHHHHHhhcCCCcceEEEECCC-CCCcCcccccCCCCEEe
Confidence 10 1122 11111 1 23444443 334899999998 58888887655555555
No 101
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=83.36 E-value=0.91 Score=45.00 Aligned_cols=38 Identities=26% Similarity=0.324 Sum_probs=30.3
Q ss_pred HHHHHhCcCCCcE-EEEcCccccchhccccccCceEEeeh
Q 010218 310 MIENSLNIHGDEI-LYVGDHIYTDVSQSKVHLRWRTALIC 348 (515)
Q Consensus 310 ~l~~ll~~~g~~V-LY~GDHI~~Di~~skk~~gWrT~aIV 348 (515)
...+.++...+++ +||||.+..||..+++ .||+|++|-
T Consensus 196 ~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~-~G~~~i~v~ 234 (236)
T TIGR01460 196 AALNLLQARPERRDVMVGDNLRTDILGAKN-AGFDTLLVL 234 (236)
T ss_pred HHHHHhCCCCccceEEECCCcHHHHHHHHH-CCCcEEEEe
Confidence 4455566666665 9999999999998875 699999983
No 102
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=82.86 E-value=0.72 Score=48.00 Aligned_cols=28 Identities=21% Similarity=0.445 Sum_probs=25.3
Q ss_pred CcEEEEcCccccchhccccccCceEEeeh
Q 010218 320 DEILYVGDHIYTDVSQSKVHLRWRTALIC 348 (515)
Q Consensus 320 ~~VLY~GDHI~~Di~~skk~~gWrT~aIV 348 (515)
.++++|||.+.+||.-++. .||.|++|-
T Consensus 264 ~~~~mIGD~~~tDI~ga~~-~G~~silV~ 291 (321)
T TIGR01456 264 HALYMVGDNPASDIIGAQN-YGWFSCLVK 291 (321)
T ss_pred heEEEEcCChhhhhhhHHh-CCceEEEec
Confidence 5899999999999998875 699999995
No 103
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=82.05 E-value=1.3 Score=44.45 Aligned_cols=41 Identities=27% Similarity=0.183 Sum_probs=29.1
Q ss_pred cccCCCcEEEEecccceeccCccchHHHHHHHHHHHHHhcCCC
Q 010218 34 LNLRSISAIGYDMDYTLMHYNVMAWEGRAYDYCMVNLRNMGFP 76 (515)
Q Consensus 34 l~L~~i~~iGFDmDyTLa~Y~~~~~e~L~y~~~~~~Lv~~gYP 76 (515)
|+|++++.|-+|||+||..=+.. .-.... .++++|.+.|.+
T Consensus 2 ~~~~~~~lI~~DlDGTLL~~~~~-i~~~~~-~ai~~l~~~Gi~ 42 (271)
T PRK03669 2 LSLQDPLLIFTDLDGTLLDSHTY-DWQPAA-PWLTRLREAQVP 42 (271)
T ss_pred CCcCCCeEEEEeCccCCcCCCCc-CcHHHH-HHHHHHHHcCCe
Confidence 68999999999999999964322 212233 335677788888
No 104
>PRK10444 UMP phosphatase; Provisional
Probab=81.93 E-value=1.2 Score=44.82 Aligned_cols=38 Identities=26% Similarity=0.359 Sum_probs=31.6
Q ss_pred HHHHHhCcCCCcEEEEcCccccchhccccccCceEEeeh
Q 010218 310 MIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALIC 348 (515)
Q Consensus 310 ~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aIV 348 (515)
...+.++....+++||||.+..||.-++. .||+|++|-
T Consensus 182 ~~~~~~~~~~~~~v~IGD~~~tDi~~A~~-~G~~~vlV~ 219 (248)
T PRK10444 182 AALNKMQAHSEETVIVGDNLRTDILAGFQ-AGLETILVL 219 (248)
T ss_pred HHHHHcCCCcccEEEECCCcHHHHHHHHH-cCCCEEEEC
Confidence 34455577788999999999999998875 699999983
No 105
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=81.58 E-value=2.3 Score=42.13 Aligned_cols=33 Identities=12% Similarity=0.132 Sum_probs=25.4
Q ss_pred HHHHHHHhCcCCCcEEEEcCccccchhccccccCc
Q 010218 308 AQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRW 342 (515)
Q Consensus 308 ~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gW 342 (515)
+..+++.+|+...+|++|||.. .|+--.+. .|+
T Consensus 204 l~~l~~~~gi~~~e~i~~GD~~-NDi~m~~~-ag~ 236 (272)
T PRK10530 204 LTQWVEAQGWSMKNVVAFGDNF-NDISMLEA-AGL 236 (272)
T ss_pred HHHHHHHcCCCHHHeEEeCCCh-hhHHHHHh-cCc
Confidence 4567888899999999999995 78775553 354
No 106
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=81.29 E-value=5.4 Score=39.04 Aligned_cols=94 Identities=14% Similarity=0.045 Sum_probs=59.4
Q ss_pred cCCCchHHHH-HHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeEEEeCCCC
Q 010218 211 PDPELPLALL-DQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLYEVVTGEG 289 (515)
Q Consensus 211 kd~~l~~~L~-~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~~v~~~~g 289 (515)
.-|.....|. .+++.|.++.++|||+-.|+..++...- |..-.++|-+ +. ++. ++|
T Consensus 95 l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~---------~~~~~~~i~t---~l----------e~~-~gg 151 (210)
T TIGR01545 95 AFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSN---------FIHRLNLIAS---QI----------ERG-NGG 151 (210)
T ss_pred CCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcc---------ccccCcEEEE---Ee----------EEe-CCc
Confidence 4678888885 6788899999999999999999997542 3333444422 22 221 113
Q ss_pred ceecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccccchh
Q 010218 290 LMRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVS 334 (515)
Q Consensus 290 ~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~~Di~ 334 (515)
.. .....|..|=+..+.+.++......-..|||+ +|+-
T Consensus 152 ~~------~g~~c~g~~Kv~rl~~~~~~~~~~~~aYsDS~-~D~p 189 (210)
T TIGR01545 152 WV------LPLRCLGHEKVAQLEQKIGSPLKLYSGYSDSK-QDNP 189 (210)
T ss_pred eE------cCccCCChHHHHHHHHHhCCChhheEEecCCc-ccHH
Confidence 21 12234555555677777764334455679998 8863
No 107
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=81.05 E-value=3.1 Score=40.60 Aligned_cols=37 Identities=11% Similarity=0.192 Sum_probs=32.9
Q ss_pred ccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhccc
Q 010218 210 EPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHS 247 (515)
Q Consensus 210 ~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl 247 (515)
...|....++..+++.| ++.++||+.-.++..++..+
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~l 104 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQL 104 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHc
Confidence 35788999999999887 89999999999999998865
No 108
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=79.81 E-value=1.9 Score=48.14 Aligned_cols=36 Identities=17% Similarity=0.338 Sum_probs=33.0
Q ss_pred CCCchHHHHHHHHhCc-eEEEEcCCCchhhHHhhccc
Q 010218 212 DPELPLALLDQKEAGK-KLLLITNSDYHYTDKMMQHS 247 (515)
Q Consensus 212 d~~l~~~L~~lr~~GK-klFLlTNS~~~yt~~~M~yl 247 (515)
-|+....+++|++.|. ++.++||.+...+..+++.+
T Consensus 364 ~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~l 400 (536)
T TIGR01512 364 RPDAAEAIAELKALGIEKVVMLTGDRRAVAERVAREL 400 (536)
T ss_pred hHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHc
Confidence 3678889999999999 99999999999999999976
No 109
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=79.63 E-value=1.4 Score=49.38 Aligned_cols=36 Identities=25% Similarity=0.342 Sum_probs=32.8
Q ss_pred CCCchHHHHHHHHhC-ceEEEEcCCCchhhHHhhccc
Q 010218 212 DPELPLALLDQKEAG-KKLLLITNSDYHYTDKMMQHS 247 (515)
Q Consensus 212 d~~l~~~L~~lr~~G-KklFLlTNS~~~yt~~~M~yl 247 (515)
-|....++.+|++.| .++.++||.+-..+..+++.+
T Consensus 386 ~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~l 422 (556)
T TIGR01525 386 RPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAEL 422 (556)
T ss_pred hHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHh
Confidence 367888999999999 999999999999999999876
No 110
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=78.34 E-value=2.1 Score=37.16 Aligned_cols=37 Identities=24% Similarity=0.325 Sum_probs=26.3
Q ss_pred cCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhccc
Q 010218 211 PDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHS 247 (515)
Q Consensus 211 kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl 247 (515)
.-|.-..++.+|+++||+++++||+.-.=....+..+
T Consensus 15 ~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L 51 (101)
T PF13344_consen 15 PIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKL 51 (101)
T ss_dssp E-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHH
T ss_pred cCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHH
Confidence 3477889999999999999999999854434444433
No 111
>PRK11587 putative phosphatase; Provisional
Probab=77.56 E-value=2.8 Score=40.56 Aligned_cols=35 Identities=14% Similarity=0.011 Sum_probs=24.3
Q ss_pred CCcEEEEecccceeccCccchHHHHHHHHHHHHHhcCCCC
Q 010218 38 SISAIGYDMDYTLMHYNVMAWEGRAYDYCMVNLRNMGFPV 77 (515)
Q Consensus 38 ~i~~iGFDmDyTLa~Y~~~~~e~L~y~~~~~~Lv~~gYP~ 77 (515)
+|++|-||||+||+--. ....+...+.+.++|+|.
T Consensus 2 ~~k~viFDlDGTL~Ds~-----~~~~~a~~~~~~~~g~~~ 36 (218)
T PRK11587 2 RCKGFLFDLDGTLVDSL-----PAVERAWSNWADRHGIAP 36 (218)
T ss_pred CCCEEEEcCCCCcCcCH-----HHHHHHHHHHHHHcCCCH
Confidence 48999999999999653 234444444456778873
No 112
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=77.01 E-value=3.7 Score=38.50 Aligned_cols=86 Identities=9% Similarity=0.066 Sum_probs=61.3
Q ss_pred CcccccccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCc-cEEEEccCCCCCCCCCCCeE
Q 010218 204 KPELFVEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLF-NMVIVSARKPEFFQMSHPLY 282 (515)
Q Consensus 204 np~kYi~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~F-DvVIv~A~KP~FF~~~~pf~ 282 (515)
+...|+.+-|.+..+|.++.+. .++.+.||+.-.|++.+++.+- ++ +.+| +.|+..-.-
T Consensus 52 ~~~~~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ld-------p~-~~~F~~ri~~rd~~----------- 111 (156)
T TIGR02250 52 TMWYLTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLID-------PD-GKYFGDRIISRDES----------- 111 (156)
T ss_pred CeEEEEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhC-------cC-CCeeccEEEEeccC-----------
Confidence 5667888999999999999854 8899999999999999999873 22 2467 655431100
Q ss_pred EEeCCCCceecccccCCCccccCCCHHHHHHHhCcCCCcEEEEcCccc
Q 010218 283 EVVTGEGLMRPCFKARTGGLYSGGSAQMIENSLNIHGDEILYVGDHIY 330 (515)
Q Consensus 283 ~v~~~~g~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDHI~ 330 (515)
+ |+..+.|..++|..-++|+.|.|+-.
T Consensus 112 -----~----------------~~~~KdL~~i~~~d~~~vvivDd~~~ 138 (156)
T TIGR02250 112 -----G----------------SPHTKSLLRLFPADESMVVIIDDRED 138 (156)
T ss_pred -----C----------------CCccccHHHHcCCCcccEEEEeCCHH
Confidence 0 23344566666766677888877753
No 113
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=76.62 E-value=19 Score=37.20 Aligned_cols=105 Identities=9% Similarity=0.074 Sum_probs=66.7
Q ss_pred cccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeEEEeCCC
Q 010218 209 VEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLYEVVTGE 288 (515)
Q Consensus 209 i~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~~v~~~~ 288 (515)
+...|....++..|++.|-++.++|++.-+++..++.-+ .|-+.|+.|+++ . .+++ ++
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~l---------gl~~~~~~IvSN--~----------L~f~-~d 177 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQA---------GVYHPNVKVVSN--F----------MDFD-ED 177 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHc---------CCCCcCceEEee--e----------EEEC-CC
Confidence 456889999999999999999999999999999998853 254555444332 1 1221 12
Q ss_pred CceecccccCCCccccCCCHHHH----HHHhC--cCCCcEEEEcCccccchhccccc
Q 010218 289 GLMRPCFKARTGGLYSGGSAQMI----ENSLN--IHGDEILYVGDHIYTDVSQSKVH 339 (515)
Q Consensus 289 g~~~~~~~l~~g~vY~gGn~~~l----~~ll~--~~g~~VLY~GDHI~~Di~~skk~ 339 (515)
|.++. ....-|-++|....+ .+.++ ....+|++|||.+- |+.-+.-.
T Consensus 178 GvltG---~~~P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~-Dl~ma~g~ 230 (277)
T TIGR01544 178 GVLKG---FKGPLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQG-DLRMADGV 230 (277)
T ss_pred CeEeC---CCCCcccccccHHHHHHHHHHHhCccCCcceEEEECcChh-hhhHhcCC
Confidence 32221 111123334444433 33456 55678999999985 77765543
No 114
>PHA02597 30.2 hypothetical protein; Provisional
Probab=76.04 E-value=2 Score=40.63 Aligned_cols=14 Identities=29% Similarity=0.245 Sum_probs=13.1
Q ss_pred CcEEEEecccceec
Q 010218 39 ISAIGYDMDYTLMH 52 (515)
Q Consensus 39 i~~iGFDmDyTLa~ 52 (515)
++++-||||+||+-
T Consensus 2 ~k~viFDlDGTLiD 15 (197)
T PHA02597 2 KPTILTDVDGVLLS 15 (197)
T ss_pred CcEEEEecCCceEc
Confidence 68999999999998
No 115
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=75.95 E-value=2.3 Score=42.26 Aligned_cols=38 Identities=26% Similarity=0.365 Sum_probs=26.8
Q ss_pred CCcEEEEecccceeccCccchHHHHHHHHHHHHHhcCCCC
Q 010218 38 SISAIGYDMDYTLMHYNVMAWEGRAYDYCMVNLRNMGFPV 77 (515)
Q Consensus 38 ~i~~iGFDmDyTLa~Y~~~~~e~L~y~~~~~~Lv~~gYP~ 77 (515)
.++.+-||||+||+..+.. ... .-..+++++.+.|.+.
T Consensus 2 ~~kli~~DlDGTLl~~~~~-i~~-~~~~al~~~~~~g~~v 39 (264)
T COG0561 2 MIKLLAFDLDGTLLDSNKT-ISP-ETKEALARLREKGVKV 39 (264)
T ss_pred CeeEEEEcCCCCccCCCCc-cCH-HHHHHHHHHHHCCCEE
Confidence 5789999999999999976 222 2223344667788874
No 116
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=75.54 E-value=2.7 Score=40.49 Aligned_cols=29 Identities=21% Similarity=0.384 Sum_probs=23.0
Q ss_pred HHHHHHHhCcCCCcEEEEcCccccchhccc
Q 010218 308 AQMIENSLNIHGDEILYVGDHIYTDVSQSK 337 (515)
Q Consensus 308 ~~~l~~ll~~~g~~VLY~GDHI~~Di~~sk 337 (515)
...+.+.+|+...++++|||..- |+--.+
T Consensus 152 i~~l~~~~~i~~~~~i~iGDs~N-D~~ml~ 180 (215)
T TIGR01487 152 VEKLKELLGIKPEEVAAIGDSEN-DIDLFR 180 (215)
T ss_pred HHHHHHHhCCCHHHEEEECCCHH-HHHHHH
Confidence 45677788999899999999876 776554
No 117
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=74.85 E-value=1.6 Score=43.19 Aligned_cols=21 Identities=38% Similarity=0.485 Sum_probs=17.3
Q ss_pred ccCCCcEEEEecccceeccCc
Q 010218 35 NLRSISAIGYDMDYTLMHYNV 55 (515)
Q Consensus 35 ~L~~i~~iGFDmDyTLa~Y~~ 55 (515)
.|.+|++|-||||+||+--.+
T Consensus 6 ~~~~~k~iiFDlDGTL~D~~~ 26 (238)
T PRK10748 6 PLGRISALTFDLDDTLYDNRP 26 (238)
T ss_pred CCCCceeEEEcCcccccCChH
Confidence 355799999999999997653
No 118
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=72.35 E-value=4 Score=41.74 Aligned_cols=36 Identities=14% Similarity=0.080 Sum_probs=26.0
Q ss_pred CCCcEEEEecccceeccCccchHHHHHHHHHHHHHhcCCC
Q 010218 37 RSISAIGYDMDYTLMHYNVMAWEGRAYDYCMVNLRNMGFP 76 (515)
Q Consensus 37 ~~i~~iGFDmDyTLa~Y~~~~~e~L~y~~~~~~Lv~~gYP 76 (515)
+.+++|-||||+||+-... .+.++...+.+.++|+|
T Consensus 38 ~~~k~VIFDlDGTLvDS~~----~~~~~a~~~~l~~~G~~ 73 (286)
T PLN02779 38 ALPEALLFDCDGVLVETER----DGHRVAFNDAFKEFGLR 73 (286)
T ss_pred cCCcEEEEeCceeEEcccc----HHHHHHHHHHHHHcCCC
Confidence 4689999999999997641 34455555556678985
No 119
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=70.99 E-value=4.8 Score=40.02 Aligned_cols=36 Identities=25% Similarity=0.310 Sum_probs=24.2
Q ss_pred cCCCcEEEEecccceeccCccchHHHHHHHHHHHHHhcCCC
Q 010218 36 LRSISAIGYDMDYTLMHYNVMAWEGRAYDYCMVNLRNMGFP 76 (515)
Q Consensus 36 L~~i~~iGFDmDyTLa~Y~~~~~e~L~y~~~~~~Lv~~gYP 76 (515)
++.|+++-||||+||+.-. ...++...+.+.++|++
T Consensus 19 ~~~~k~viFDlDGTLiDs~-----~~~~~a~~~~~~~~g~~ 54 (248)
T PLN02770 19 LAPLEAVLFDVDGTLCDSD-----PLHYYAFREMLQEINFN 54 (248)
T ss_pred cCccCEEEEcCCCccCcCH-----HHHHHHHHHHHHHhccc
Confidence 5678999999999999653 23444444445556654
No 120
>PRK09449 dUMP phosphatase; Provisional
Probab=69.77 E-value=4.1 Score=39.24 Aligned_cols=17 Identities=35% Similarity=0.557 Sum_probs=14.7
Q ss_pred CCcEEEEecccceeccC
Q 010218 38 SISAIGYDMDYTLMHYN 54 (515)
Q Consensus 38 ~i~~iGFDmDyTLa~Y~ 54 (515)
.|++|-||||+||+.+.
T Consensus 2 ~~k~iiFDlDGTLid~~ 18 (224)
T PRK09449 2 KYDWILFDADETLFHFD 18 (224)
T ss_pred CccEEEEcCCCchhcch
Confidence 48999999999999743
No 121
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=66.88 E-value=3.5 Score=36.49 Aligned_cols=39 Identities=26% Similarity=0.310 Sum_probs=22.8
Q ss_pred cEEEEecccceec---cCccchHHHHHHHH---HHHHHhcCCCCC
Q 010218 40 SAIGYDMDYTLMH---YNVMAWEGRAYDYC---MVNLRNMGFPVE 78 (515)
Q Consensus 40 ~~iGFDmDyTLa~---Y~~~~~e~L~y~~~---~~~Lv~~gYP~~ 78 (515)
+++-||+|+||.. |..+.-+...|..+ ++.|.+.||+.-
T Consensus 1 k~~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~l~ 45 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPYVDDEDERILYPEVPDALAELKEAGYKVV 45 (132)
T ss_pred CEEEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHHHHCCCEEE
Confidence 5788999999994 22221122334443 345566777743
No 122
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=66.05 E-value=5.9 Score=37.77 Aligned_cols=18 Identities=17% Similarity=0.493 Sum_probs=15.8
Q ss_pred CcEEEEecccceeccCcc
Q 010218 39 ISAIGYDMDYTLMHYNVM 56 (515)
Q Consensus 39 i~~iGFDmDyTLa~Y~~~ 56 (515)
|+++-||||+||+...+.
T Consensus 1 ~k~viFD~DGTL~d~~~~ 18 (224)
T TIGR02254 1 YKTLLFDLDDTILDFQAA 18 (224)
T ss_pred CCEEEEcCcCcccccchH
Confidence 688999999999998764
No 123
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=65.79 E-value=8 Score=36.15 Aligned_cols=14 Identities=29% Similarity=0.299 Sum_probs=11.8
Q ss_pred cEEEEecccceecc
Q 010218 40 SAIGYDMDYTLMHY 53 (515)
Q Consensus 40 ~~iGFDmDyTLa~Y 53 (515)
++|-||||+||+--
T Consensus 1 ~~viFDlDGTL~ds 14 (184)
T TIGR01993 1 DVWFFDLDNTLYPH 14 (184)
T ss_pred CeEEEeCCCCCCCC
Confidence 57899999999943
No 124
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=65.12 E-value=20 Score=35.32 Aligned_cols=41 Identities=17% Similarity=0.239 Sum_probs=35.9
Q ss_pred cccccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhccc
Q 010218 207 LFVEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHS 247 (515)
Q Consensus 207 kYi~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl 247 (515)
.++.--|....++..+++.|-++++||.|.-.+++.++..+
T Consensus 74 ~~~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~l 114 (212)
T COG0560 74 EFLRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERL 114 (212)
T ss_pred hcCcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHh
Confidence 33555678889999999999999999999999999999866
No 125
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=63.88 E-value=11 Score=39.26 Aligned_cols=68 Identities=16% Similarity=0.205 Sum_probs=55.7
Q ss_pred HcCcccccccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCC
Q 010218 202 MSKPELFVEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMS 278 (515)
Q Consensus 202 ~~np~kYi~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~ 278 (515)
..+-+.=-.++|.+..-|.+||+.|..|.|=+-..-+++...|+-+- =.++||+||+.+++-+-....
T Consensus 134 Itd~~~v~Ir~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~~~---------L~~~Fd~ii~~G~~~~~~~~~ 201 (297)
T PF05152_consen 134 ITDEGDVRIRDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKELK---------LEGYFDIIICGGNKAGEYNSR 201 (297)
T ss_pred cccCCccccCChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHhC---------CccccEEEEeCCccCCcCCcc
Confidence 33333334689999999999999999999999999999999999662 238999999999998777644
No 126
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=63.04 E-value=4.2 Score=39.93 Aligned_cols=20 Identities=25% Similarity=0.436 Sum_probs=16.7
Q ss_pred cccCCCcEEEEecccceecc
Q 010218 34 LNLRSISAIGYDMDYTLMHY 53 (515)
Q Consensus 34 l~L~~i~~iGFDmDyTLa~Y 53 (515)
++...+++|-||||+||+-.
T Consensus 5 ~~~~~~k~vIFDlDGTL~d~ 24 (224)
T PRK14988 5 IAWQDVDTVLLDMDGTLLDL 24 (224)
T ss_pred CCcccCCEEEEcCCCCccch
Confidence 34567899999999999983
No 127
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=62.93 E-value=7.1 Score=38.78 Aligned_cols=37 Identities=24% Similarity=0.231 Sum_probs=25.6
Q ss_pred CCcEEEEecccceeccCccchHHHHHHHHHHHHHhcCCC
Q 010218 38 SISAIGYDMDYTLMHYNVMAWEGRAYDYCMVNLRNMGFP 76 (515)
Q Consensus 38 ~i~~iGFDmDyTLa~Y~~~~~e~L~y~~~~~~Lv~~gYP 76 (515)
.|+.+.||||+||...+. .+..-.. .++++|.+.|++
T Consensus 2 ~~kli~~DlDGTLl~~~~-~i~~~~~-~ai~~l~~~G~~ 38 (270)
T PRK10513 2 AIKLIAIDMDGTLLLPDH-TISPAVK-QAIAAARAKGVN 38 (270)
T ss_pred ceEEEEEecCCcCcCCCC-ccCHHHH-HHHHHHHHCCCE
Confidence 478999999999997643 2322233 345667788887
No 128
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=62.62 E-value=8.9 Score=37.51 Aligned_cols=35 Identities=20% Similarity=0.102 Sum_probs=25.0
Q ss_pred CCcEEEEecccceeccCccchHHHHHHHHHHHHHhcCCCC
Q 010218 38 SISAIGYDMDYTLMHYNVMAWEGRAYDYCMVNLRNMGFPV 77 (515)
Q Consensus 38 ~i~~iGFDmDyTLa~Y~~~~~e~L~y~~~~~~Lv~~gYP~ 77 (515)
-++++-||||+||+--. ....+...+.+.+.|+|.
T Consensus 11 ~~k~viFD~DGTL~Ds~-----~~~~~a~~~~~~~~g~~~ 45 (229)
T PRK13226 11 FPRAVLFDLDGTLLDSA-----PDMLATVNAMLAARGRAP 45 (229)
T ss_pred cCCEEEEcCcCccccCH-----HHHHHHHHHHHHHCCCCC
Confidence 45799999999999753 345555555567788873
No 129
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=62.49 E-value=9.4 Score=42.99 Aligned_cols=35 Identities=14% Similarity=0.227 Sum_probs=32.2
Q ss_pred CCchHHHHHHHHhCceEEEEcCCCchhhHHhhccc
Q 010218 213 PELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHS 247 (515)
Q Consensus 213 ~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl 247 (515)
|....++++|++.|.++.++||.+-.+++.+++.+
T Consensus 408 ~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~l 442 (562)
T TIGR01511 408 PEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKEL 442 (562)
T ss_pred HHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHc
Confidence 56788999999999999999999999999999976
No 130
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=62.40 E-value=7.6 Score=37.45 Aligned_cols=35 Identities=17% Similarity=0.296 Sum_probs=26.5
Q ss_pred CHHHHHHHhCcCCCcEEEEcCccccchhccccccCce
Q 010218 307 SAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWR 343 (515)
Q Consensus 307 n~~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~~gWr 343 (515)
-...+++.+|....++++|||..- |+--.+. .|+-
T Consensus 161 al~~l~~~~~i~~~~~i~~GD~~N-Di~m~~~-ag~~ 195 (230)
T PRK01158 161 GLKKLAELMGIDPEEVAAIGDSEN-DLEMFEV-AGFG 195 (230)
T ss_pred HHHHHHHHhCCCHHHEEEECCchh-hHHHHHh-cCce
Confidence 346788888999999999999876 8776553 3553
No 131
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=61.94 E-value=5.9 Score=36.15 Aligned_cols=15 Identities=20% Similarity=0.255 Sum_probs=13.1
Q ss_pred cEEEEecccceeccC
Q 010218 40 SAIGYDMDYTLMHYN 54 (515)
Q Consensus 40 ~~iGFDmDyTLa~Y~ 54 (515)
++|.||+|+||+..+
T Consensus 2 K~i~~DiDGTL~~~~ 16 (126)
T TIGR01689 2 KRLVMDLDNTITLTE 16 (126)
T ss_pred CEEEEeCCCCcccCC
Confidence 689999999998764
No 132
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=61.92 E-value=7.9 Score=36.73 Aligned_cols=32 Identities=16% Similarity=0.106 Sum_probs=20.1
Q ss_pred cEEEEecccceeccCccchHHHHHHHHHHHHHhcCCC
Q 010218 40 SAIGYDMDYTLMHYNVMAWEGRAYDYCMVNLRNMGFP 76 (515)
Q Consensus 40 ~~iGFDmDyTLa~Y~~~~~e~L~y~~~~~~Lv~~gYP 76 (515)
++|-||||+||+-=. ...++...+.+..+|++
T Consensus 1 ~~viFD~DGTLiDs~-----~~~~~a~~~~~~~~g~~ 32 (197)
T TIGR01548 1 QALVLDMDGVMADVS-----QSYRRAIIDTVEHFGGV 32 (197)
T ss_pred CceEEecCceEEech-----HHHHHHHHHHHHHHcCC
Confidence 467899999999432 33444444455556644
No 133
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=61.53 E-value=5.4 Score=37.62 Aligned_cols=41 Identities=17% Similarity=0.299 Sum_probs=24.9
Q ss_pred CCcEEEEecccceeccCccc-h----HHH--HHHHH---HHHHHhcCCCCC
Q 010218 38 SISAIGYDMDYTLMHYNVMA-W----EGR--AYDYC---MVNLRNMGFPVE 78 (515)
Q Consensus 38 ~i~~iGFDmDyTLa~Y~~~~-~----e~L--~y~~~---~~~Lv~~gYP~~ 78 (515)
..+++-||+|+||...++.. + +.. .|+.+ +++|.+.||+.-
T Consensus 12 ~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~ 62 (166)
T TIGR01664 12 QSKVAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQELDDEGYKIV 62 (166)
T ss_pred cCcEEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHHHHCCCEEE
Confidence 45889999999999754321 1 111 23333 455667788854
No 134
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=61.42 E-value=9.3 Score=36.15 Aligned_cols=32 Identities=25% Similarity=0.263 Sum_probs=20.2
Q ss_pred cEEEEecccceeccCccchHHHHHHHHHHHHHhcCCC
Q 010218 40 SAIGYDMDYTLMHYNVMAWEGRAYDYCMVNLRNMGFP 76 (515)
Q Consensus 40 ~~iGFDmDyTLa~Y~~~~~e~L~y~~~~~~Lv~~gYP 76 (515)
+++-||||+||+.-... + ..++..+. .+.|.|
T Consensus 1 k~viFDlDGTL~d~~~~-~-~~a~~~~~---~~~g~~ 32 (203)
T TIGR02252 1 KLITFDAVGTLLALKEP-V-GEVYCEIA---RKYGVE 32 (203)
T ss_pred CeEEEecCCceeeeCCC-H-HHHHHHHH---HHhCCC
Confidence 47899999999986532 2 22443333 345766
No 135
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=60.86 E-value=8.1 Score=40.37 Aligned_cols=49 Identities=18% Similarity=0.264 Sum_probs=32.0
Q ss_pred CccccCCCcEEEEecccceeccCccc-h-HHHHHHHHHHHHHhcCCCCCCCC
Q 010218 32 RTLNLRSISAIGYDMDYTLMHYNVMA-W-EGRAYDYCMVNLRNMGFPVEGLA 81 (515)
Q Consensus 32 r~l~L~~i~~iGFDmDyTLa~Y~~~~-~-e~L~y~~~~~~Lv~~gYP~~~l~ 81 (515)
.++-.+-.++|.||||+||+.=..+. . ..-+.+ +++.|.+.|+|..+.+
T Consensus 119 ~~~~~~~~kvIvFDLDgTLi~~~~~v~irdPgV~E-aL~~LkekGikLaIaT 169 (301)
T TIGR01684 119 PSKVFEPPHVVVFDLDSTLITDEEPVRIRDPRIYD-SLTELKKRGCILVLWS 169 (301)
T ss_pred cccccccceEEEEecCCCCcCCCCccccCCHHHHH-HHHHHHHCCCEEEEEE
Confidence 34556677899999999999775321 1 122333 4577888898855443
No 136
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=60.15 E-value=9.9 Score=38.79 Aligned_cols=34 Identities=21% Similarity=0.301 Sum_probs=22.8
Q ss_pred CCcEEEEecccceeccCccchHHHHHHHHHHHHHhcCCC
Q 010218 38 SISAIGYDMDYTLMHYNVMAWEGRAYDYCMVNLRNMGFP 76 (515)
Q Consensus 38 ~i~~iGFDmDyTLa~Y~~~~~e~L~y~~~~~~Lv~~gYP 76 (515)
.++++-||||+||+.=. ........+.+.+.|++
T Consensus 61 ~~k~vIFDlDGTLiDS~-----~~~~~a~~~~~~~~G~~ 94 (273)
T PRK13225 61 TLQAIIFDFDGTLVDSL-----PTVVAIANAHAPDFGYD 94 (273)
T ss_pred hcCEEEECCcCccccCH-----HHHHHHHHHHHHHCCCC
Confidence 48899999999999732 22333444445567876
No 137
>COG0731 Fe-S oxidoreductases [Energy production and conversion]
Probab=60.00 E-value=7.3 Score=40.63 Aligned_cols=81 Identities=15% Similarity=0.036 Sum_probs=47.9
Q ss_pred hhchhHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHHhccchhhhHHHHHcCcccccc--------cCCCchHH
Q 010218 147 LFSVSEAVAYMQMVNRLDEGAIGPELGPLDYKGLYKAVGKALFRAHVEGQLKSEIMSKPELFVE--------PDPELPLA 218 (515)
Q Consensus 147 lFslpe~~L~a~lVd~~d~~~~~~~~~~~~y~~l~~dv~~av~~vH~~G~lk~~v~~np~kYi~--------kd~~l~~~ 218 (515)
.......|+|+++ -.+....+..-.++.-.+|.+.++.-+.... + .+---.||- -+|.|..+
T Consensus 31 ~~~Cs~~CvyC~~--G~~~~~~~~~~efi~~~~I~~~~~~~~~~~g-~-------ea~~pd~vtis~~GEPTLy~~L~el 100 (296)
T COG0731 31 KKWCSYNCVYCWR--GRTKKGTPERPEFIVEESILEELKLLLGYKG-D-------EATEPDHVTISLSGEPTLYPNLGEL 100 (296)
T ss_pred hhhhcCCCeEEec--ccCCCCCCCCCceecHHHHHHHHHHHhcccc-c-------ccCCCCEEEEeCCCCcccccCHHHH
Confidence 3345556888887 1111111111124556677777766555433 0 111223331 15688888
Q ss_pred HHHHHHhC-ceEEEEcCCCc
Q 010218 219 LLDQKEAG-KKLLLITNSDY 237 (515)
Q Consensus 219 L~~lr~~G-KklFLlTNS~~ 237 (515)
++.+++.| +++||||||.-
T Consensus 101 I~~~k~~g~~~tflvTNgsl 120 (296)
T COG0731 101 IEEIKKRGKKTTFLVTNGSL 120 (296)
T ss_pred HHHHHhcCCceEEEEeCCCh
Confidence 89999999 79999999988
No 138
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=58.75 E-value=5.3 Score=37.50 Aligned_cols=33 Identities=27% Similarity=0.458 Sum_probs=27.6
Q ss_pred cCcccccccCCCchHHHHHHHHhCceEEEEcCC
Q 010218 203 SKPELFVEPDPELPLALLDQKEAGKKLLLITNS 235 (515)
Q Consensus 203 ~np~kYi~kd~~l~~~L~~lr~~GKklFLlTNS 235 (515)
.+|+.+.--.|.++..|.++.+.|.+++++||-
T Consensus 22 ~~~~D~~~~~~~v~~~L~~l~~~Gy~IvIvTNQ 54 (159)
T PF08645_consen 22 KDPDDWKFFPPGVPEALRELHKKGYKIVIVTNQ 54 (159)
T ss_dssp SSTCGGEEC-TTHHHHHHHHHHTTEEEEEEEE-
T ss_pred CCHHHhhhcchhHHHHHHHHHhcCCeEEEEeCc
Confidence 468888878888999999999999999999995
No 139
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=58.56 E-value=12 Score=34.48 Aligned_cols=16 Identities=25% Similarity=0.372 Sum_probs=14.2
Q ss_pred CcEEEEecccceeccC
Q 010218 39 ISAIGYDMDYTLMHYN 54 (515)
Q Consensus 39 i~~iGFDmDyTLa~Y~ 54 (515)
|++|=||+|+||+--.
T Consensus 1 ~~~iiFD~DGTL~ds~ 16 (185)
T TIGR02009 1 YKAVIFDMDGVIVDTA 16 (185)
T ss_pred CCeEEEcCCCcccCCh
Confidence 5789999999999875
No 140
>PTZ00174 phosphomannomutase; Provisional
Probab=58.52 E-value=11 Score=37.40 Aligned_cols=37 Identities=19% Similarity=0.229 Sum_probs=25.7
Q ss_pred CCcEEEEecccceeccCccchHHHHHHHHHHHHHhcCCC
Q 010218 38 SISAIGYDMDYTLMHYNVMAWEGRAYDYCMVNLRNMGFP 76 (515)
Q Consensus 38 ~i~~iGFDmDyTLa~Y~~~~~e~L~y~~~~~~Lv~~gYP 76 (515)
+++.|.||||+||..-+.+ +..-. .-+++++.+.|..
T Consensus 4 ~~klia~DlDGTLL~~~~~-is~~~-~~ai~~l~~~Gi~ 40 (247)
T PTZ00174 4 KKTILLFDVDGTLTKPRNP-ITQEM-KDTLAKLKSKGFK 40 (247)
T ss_pred CCeEEEEECcCCCcCCCCC-CCHHH-HHHHHHHHHCCCE
Confidence 4899999999999976643 33333 3445667777775
No 141
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=58.30 E-value=10 Score=38.21 Aligned_cols=36 Identities=11% Similarity=0.119 Sum_probs=26.7
Q ss_pred HHHHHHHhCcCC-CcEEEEcCccccchhccccccCceEE
Q 010218 308 AQMIENSLNIHG-DEILYVGDHIYTDVSQSKVHLRWRTA 345 (515)
Q Consensus 308 ~~~l~~ll~~~g-~~VLY~GDHI~~Di~~skk~~gWrT~ 345 (515)
...+.+.+|... .+|++|||..- |+--.+ ..|...+
T Consensus 195 l~~l~~~~~i~~~~~v~~~GDs~N-Di~m~~-~ag~~va 231 (273)
T PRK00192 195 VRWLKELYRRQDGVETIALGDSPN-DLPMLE-AADIAVV 231 (273)
T ss_pred HHHHHHHHhccCCceEEEEcCChh-hHHHHH-hCCeeEE
Confidence 567888889998 99999999987 765444 3454444
No 142
>PRK10976 putative hydrolase; Provisional
Probab=57.64 E-value=11 Score=37.52 Aligned_cols=36 Identities=19% Similarity=0.138 Sum_probs=25.3
Q ss_pred CcEEEEecccceeccCccchHHHHHHHHHHHHHhcCCC
Q 010218 39 ISAIGYDMDYTLMHYNVMAWEGRAYDYCMVNLRNMGFP 76 (515)
Q Consensus 39 i~~iGFDmDyTLa~Y~~~~~e~L~y~~~~~~Lv~~gYP 76 (515)
|+.+.+|||+||..-+.. ...-.. .++++|.+.|.+
T Consensus 2 ikli~~DlDGTLl~~~~~-is~~~~-~ai~~l~~~G~~ 37 (266)
T PRK10976 2 YQVVASDLDGTLLSPDHT-LSPYAK-ETLKLLTARGIH 37 (266)
T ss_pred ceEEEEeCCCCCcCCCCc-CCHHHH-HHHHHHHHCCCE
Confidence 689999999999976532 333333 345667788887
No 143
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=56.19 E-value=9.4 Score=35.83 Aligned_cols=11 Identities=36% Similarity=0.561 Sum_probs=6.8
Q ss_pred CCCcEEEEcCc
Q 010218 318 HGDEILYVGDH 328 (515)
Q Consensus 318 ~g~~VLY~GDH 328 (515)
.-.+-+||||-
T Consensus 117 d~~~Sf~VGDa 127 (159)
T PF08645_consen 117 DLANSFYVGDA 127 (159)
T ss_dssp -CCC-EEEESS
T ss_pred cccceEEEecc
Confidence 34678999983
No 144
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=56.11 E-value=12 Score=34.50 Aligned_cols=40 Identities=20% Similarity=0.173 Sum_probs=24.8
Q ss_pred CcEEEEecccceec----cCccc--hHHH--HHHHHHHHHHhcCCCCC
Q 010218 39 ISAIGYDMDYTLMH----YNVMA--WEGR--AYDYCMVNLRNMGFPVE 78 (515)
Q Consensus 39 i~~iGFDmDyTLa~----Y~~~~--~e~L--~y~~~~~~Lv~~gYP~~ 78 (515)
|+++-||+|+||.. |.... ...+ .=..+++.|.+.||..-
T Consensus 1 ~~~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~~~~~i~~Lk~~G~~i~ 48 (154)
T TIGR01670 1 IRLLILDVDGVLTDGKIYYTNNGEEIKAFNVRDGYGIRCALKSGIEVA 48 (154)
T ss_pred CeEEEEeCceeEEcCeEEECCCCcEEEEEechhHHHHHHHHHCCCEEE
Confidence 67899999999998 33321 1111 10126778877787744
No 145
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=55.38 E-value=10 Score=37.35 Aligned_cols=34 Identities=26% Similarity=0.342 Sum_probs=22.6
Q ss_pred EEEEecccceeccCccchHHHHHHHHHHHHHhcCCCC
Q 010218 41 AIGYDMDYTLMHYNVMAWEGRAYDYCMVNLRNMGFPV 77 (515)
Q Consensus 41 ~iGFDmDyTLa~Y~~~~~e~L~y~~~~~~Lv~~gYP~ 77 (515)
+|-||||+||.. ....... -..++++|.+.|.|.
T Consensus 1 li~~DlDGTLl~-~~~~~~~--~~~ai~~l~~~G~~~ 34 (225)
T TIGR02461 1 VIFTDLDGTLLP-PGYEPGP--AREALEELKDLGFPI 34 (225)
T ss_pred CEEEeCCCCCcC-CCCCchH--HHHHHHHHHHCCCEE
Confidence 367999999998 3333332 244556777788883
No 146
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=54.61 E-value=6.8 Score=37.56 Aligned_cols=19 Identities=42% Similarity=0.585 Sum_probs=16.1
Q ss_pred cCCCcEEEEecccceeccC
Q 010218 36 LRSISAIGYDMDYTLMHYN 54 (515)
Q Consensus 36 L~~i~~iGFDmDyTLa~Y~ 54 (515)
++.++++-||||+||+...
T Consensus 11 ~~~~k~iiFD~DGTL~~~~ 29 (219)
T TIGR00338 11 LRSKKLVVFDMDSTLINAE 29 (219)
T ss_pred hccCCEEEEeCcccCCCch
Confidence 5568899999999999863
No 147
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=53.52 E-value=11 Score=37.65 Aligned_cols=21 Identities=14% Similarity=0.300 Sum_probs=19.1
Q ss_pred HHHHHHHhCcCCCcEEEEcCc
Q 010218 308 AQMIENSLNIHGDEILYVGDH 328 (515)
Q Consensus 308 ~~~l~~ll~~~g~~VLY~GDH 328 (515)
.+.|++.+|+...+|+-|||.
T Consensus 193 l~~l~~~~gi~~~~v~afGD~ 213 (272)
T PRK15126 193 LAVLSQHLGLSLADCMAFGDA 213 (272)
T ss_pred HHHHHHHhCCCHHHeEEecCC
Confidence 468999999999999999997
No 148
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=53.09 E-value=33 Score=34.75 Aligned_cols=110 Identities=14% Similarity=0.175 Sum_probs=65.9
Q ss_pred cCcccccccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeE
Q 010218 203 SKPELFVEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLY 282 (515)
Q Consensus 203 ~np~kYi~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~ 282 (515)
....++..-+|+++.++..|.+.|..++-+|..+-.+.+..+++|-.- | +-..+ ++ |.+..-+.
T Consensus 74 ~~~~~~~lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~----g--------i~fs~--~~--~~~~~~~~ 137 (252)
T PF11019_consen 74 FELRKMELIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSL----G--------IDFSS--SS--FPEDGIIS 137 (252)
T ss_pred HhhcceEEcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHC----C--------CCccc--cc--cccCccee
Confidence 334455555779999999999999999999999999999999988631 1 11111 11 22211111
Q ss_pred EEeCCCCceecccccCCCccccCCCHH-----HHHHHhCcCCCcEEEEcCcc
Q 010218 283 EVVTGEGLMRPCFKARTGGLYSGGSAQ-----MIENSLNIHGDEILYVGDHI 329 (515)
Q Consensus 283 ~v~~~~g~~~~~~~l~~g~vY~gGn~~-----~l~~ll~~~g~~VLY~GDHI 329 (515)
......+. ........|-+|++|-.+ .|...+|+.-++|+||-|..
T Consensus 138 ~~~~~~~~-~~~~~~~~GIlft~~~~KG~~L~~fL~~~~~~pk~IIfIDD~~ 188 (252)
T PF11019_consen 138 FPVFDSAL-SRAPSFYDGILFTGGQDKGEVLKYFLDKINQSPKKIIFIDDNK 188 (252)
T ss_pred cccccCCC-CCCceeecCeEEeCCCccHHHHHHHHHHcCCCCCeEEEEeCCH
Confidence 11111100 011123456666666443 45555678888999998864
No 149
>PLN02954 phosphoserine phosphatase
Probab=53.06 E-value=7.4 Score=37.44 Aligned_cols=25 Identities=12% Similarity=0.150 Sum_probs=18.3
Q ss_pred CcEEEEcCccccchhccccccCceEEe
Q 010218 320 DEILYVGDHIYTDVSQSKVHLRWRTAL 346 (515)
Q Consensus 320 ~~VLY~GDHI~~Di~~skk~~gWrT~a 346 (515)
++++||||++. |+.. .+..|..+++
T Consensus 170 ~~~i~iGDs~~-Di~a-a~~~~~~~~~ 194 (224)
T PLN02954 170 KTMVMIGDGAT-DLEA-RKPGGADLFI 194 (224)
T ss_pred CceEEEeCCHH-HHHh-hhcCCCCEEE
Confidence 68999999988 9887 4444555444
No 150
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=52.76 E-value=11 Score=31.72 Aligned_cols=15 Identities=33% Similarity=0.474 Sum_probs=12.5
Q ss_pred EEEEecccceeccCc
Q 010218 41 AIGYDMDYTLMHYNV 55 (515)
Q Consensus 41 ~iGFDmDyTLa~Y~~ 55 (515)
++-||+|+||+.-++
T Consensus 1 ~~vfD~D~tl~~~~~ 15 (139)
T cd01427 1 AVLFDLDGTLLDSEP 15 (139)
T ss_pred CeEEccCCceEccCc
Confidence 367999999988874
No 151
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=52.56 E-value=15 Score=33.53 Aligned_cols=101 Identities=9% Similarity=0.108 Sum_probs=63.4
Q ss_pred ccchhhhHHHHHcCccccc--ccCCCchHHHHHHHHhCceEEEEcCCCchhhH------------HhhcccccccCCCCC
Q 010218 191 AHVEGQLKSEIMSKPELFV--EPDPELPLALLDQKEAGKKLLLITNSDYHYTD------------KMMQHSFNRFLPNDM 256 (515)
Q Consensus 191 vH~~G~lk~~v~~np~kYi--~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~------------~~M~yl~~~~~~~g~ 256 (515)
+..+|+| +..+.+.|. ...+.....|.++++.|-+++++|.-+..... .+..++-
T Consensus 6 ~DiDGTL---~~~~~~~y~~~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~-------- 74 (126)
T TIGR01689 6 MDLDNTI---TLTENGDYANVAPILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLN-------- 74 (126)
T ss_pred EeCCCCc---ccCCCCcccccccCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchhhHHHHHHHHH--------
Confidence 3467887 333445564 34566777788888999999999999988876 6666663
Q ss_pred CCCCCccEEEEccCCC---CCCCCCCCeEEEeCCCCceecccccCCCccccCCCHHHHHHHhCcCC
Q 010218 257 GWRDLFNMVIVSARKP---EFFQMSHPLYEVVTGEGLMRPCFKARTGGLYSGGSAQMIENSLNIHG 319 (515)
Q Consensus 257 dWrd~FDvVIv~A~KP---~FF~~~~pf~~v~~~~g~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g 319 (515)
.|.=-||=|++..--| +||-+.+.. +...+.+=|.++++++++.+.
T Consensus 75 k~~ipYd~l~~~kp~~~~~~~~~dD~~i-----------------r~~~~~~~~~~~~~~~~~~~~ 123 (126)
T TIGR01689 75 QHNVPYDEIYVGKPWCGHDGFYVDDRAI-----------------RPSEFSSLTYDEINTLTKIDK 123 (126)
T ss_pred HcCCCCceEEeCCCcCCCCCceecchhh-----------------CHHHHHhcCHHHHHHHHhhcc
Confidence 3555567777743222 354443321 223445556667777776543
No 152
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=52.34 E-value=9.2 Score=36.19 Aligned_cols=22 Identities=23% Similarity=0.368 Sum_probs=15.5
Q ss_pred HhCcCCCcEEEEcCccccchhcc
Q 010218 314 SLNIHGDEILYVGDHIYTDVSQS 336 (515)
Q Consensus 314 ll~~~g~~VLY~GDHI~~Di~~s 336 (515)
.++..+.+++||||.. .|+...
T Consensus 139 ~~~~~~~~~v~iGDs~-~D~~~~ 160 (205)
T PRK13582 139 ALKSLGYRVIAAGDSY-NDTTML 160 (205)
T ss_pred HHHHhCCeEEEEeCCH-HHHHHH
Confidence 3344567899999996 786433
No 153
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=52.14 E-value=17 Score=36.84 Aligned_cols=34 Identities=21% Similarity=0.127 Sum_probs=22.1
Q ss_pred CCcEEEEecccceeccCccchHHHHHHHHHHHHHhcCCC
Q 010218 38 SISAIGYDMDYTLMHYNVMAWEGRAYDYCMVNLRNMGFP 76 (515)
Q Consensus 38 ~i~~iGFDmDyTLa~Y~~~~~e~L~y~~~~~~Lv~~gYP 76 (515)
=|+++-||||+||+.-. ....+...+.+.+.|.|
T Consensus 12 ~~k~viFDlDGTL~Ds~-----~~~~~a~~~~~~~~g~~ 45 (272)
T PRK13223 12 LPRLVMFDLDGTLVDSV-----PDLAAAVDRMLLELGRP 45 (272)
T ss_pred cCCEEEEcCCCccccCH-----HHHHHHHHHHHHHcCCC
Confidence 46799999999999643 23333333344566766
No 154
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=51.92 E-value=13 Score=35.25 Aligned_cols=30 Identities=23% Similarity=0.361 Sum_probs=18.2
Q ss_pred EEEecccceeccCccchHHHHHHHHHHHHHhcCCC
Q 010218 42 IGYDMDYTLMHYNVMAWEGRAYDYCMVNLRNMGFP 76 (515)
Q Consensus 42 iGFDmDyTLa~Y~~~~~e~L~y~~~~~~Lv~~gYP 76 (515)
+-||||+||+-- +....+...+.+.+.|.|
T Consensus 1 viFD~DGTL~Ds-----~~~~~~~~~~~~~~~~~~ 30 (213)
T TIGR01449 1 VLFDLDGTLVDS-----APDIAAAVNMALAALGLP 30 (213)
T ss_pred CeecCCCccccC-----HHHHHHHHHHHHHHCCCC
Confidence 359999999952 223334333345567776
No 155
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=51.74 E-value=14 Score=38.68 Aligned_cols=49 Identities=20% Similarity=0.258 Sum_probs=32.1
Q ss_pred ccccCCCcEEEEecccceeccCccc-h-HHHHHHHHHHHHHhcCCCCCCCCC
Q 010218 33 TLNLRSISAIGYDMDYTLMHYNVMA-W-EGRAYDYCMVNLRNMGFPVEGLAF 82 (515)
Q Consensus 33 ~l~L~~i~~iGFDmDyTLa~Y~~~~-~-e~L~y~~~~~~Lv~~gYP~~~l~y 82 (515)
++-.+-.+.++||||+||+.=..+. . ..-+++ +++.|.+.|++..+.+.
T Consensus 122 ~~~~~~~~~i~~D~D~TL~~~~~~v~irdp~V~E-tL~eLkekGikLaIvTN 172 (303)
T PHA03398 122 SLVWEIPHVIVFDLDSTLITDEEPVRIRDPFVYD-SLDELKERGCVLVLWSY 172 (303)
T ss_pred eeEeeeccEEEEecCCCccCCCCccccCChhHHH-HHHHHHHCCCEEEEEcC
Confidence 3445567899999999999775421 0 123455 45678888998654443
No 156
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=51.60 E-value=15 Score=35.34 Aligned_cols=26 Identities=23% Similarity=0.265 Sum_probs=21.9
Q ss_pred HHHHHHHhCcCCCcEEEEcCccccchh
Q 010218 308 AQMIENSLNIHGDEILYVGDHIYTDVS 334 (515)
Q Consensus 308 ~~~l~~ll~~~g~~VLY~GDHI~~Di~ 334 (515)
...+++.+|+...+|++|||..- |+-
T Consensus 184 l~~l~~~lgi~~~~vi~~GD~~N-Di~ 209 (221)
T TIGR02463 184 ANWLKATYNQPDVKTLGLGDGPN-DLP 209 (221)
T ss_pred HHHHHHHhCCCCCcEEEECCCHH-HHH
Confidence 57888899999999999999865 554
No 157
>PLN02645 phosphoglycolate phosphatase
Probab=51.32 E-value=15 Score=38.11 Aligned_cols=65 Identities=17% Similarity=0.115 Sum_probs=41.1
Q ss_pred ccchhhhHHHHHcCcccccccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEcc
Q 010218 191 AHVEGQLKSEIMSKPELFVEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSA 269 (515)
Q Consensus 191 vH~~G~lk~~v~~np~kYi~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A 269 (515)
...+|+|+.. + . .=|.....|.+|++.||+++++||.+..-...+.+.+-. + | -.-.+|-|++.+
T Consensus 33 ~D~DGtl~~~---~---~--~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~--l--G--i~~~~~~I~ts~ 97 (311)
T PLN02645 33 FDCDGVIWKG---D---K--LIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFES--L--G--LNVTEEEIFSSS 97 (311)
T ss_pred EeCcCCeEeC---C---c--cCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHH--C--C--CCCChhhEeehH
Confidence 4577888642 1 1 226678999999999999999999775444444433311 0 1 224466666664
No 158
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=50.65 E-value=12 Score=34.97 Aligned_cols=14 Identities=21% Similarity=0.225 Sum_probs=11.7
Q ss_pred EEEEecccceeccC
Q 010218 41 AIGYDMDYTLMHYN 54 (515)
Q Consensus 41 ~iGFDmDyTLa~Y~ 54 (515)
+|-||||+||+...
T Consensus 1 iVisDIDGTL~~sd 14 (157)
T smart00775 1 IVISDIDGTITKSD 14 (157)
T ss_pred CEEEecCCCCcccc
Confidence 36799999999775
No 159
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=50.29 E-value=14 Score=37.43 Aligned_cols=37 Identities=19% Similarity=0.134 Sum_probs=24.6
Q ss_pred CCcEEEEecccceeccCccchHHHHHHHHHHHHHhcCCCC
Q 010218 38 SISAIGYDMDYTLMHYNVMAWEGRAYDYCMVNLRNMGFPV 77 (515)
Q Consensus 38 ~i~~iGFDmDyTLa~Y~~~~~e~L~y~~~~~~Lv~~gYP~ 77 (515)
.|+++-||||+||..-+ ..+.. +.+. +++|.+.|.|.
T Consensus 1 ~~~~~~~D~DGtl~~~~-~~~~g-a~e~-l~~L~~~g~~~ 37 (279)
T TIGR01452 1 RAQGFIFDCDGVLWLGE-RVVPG-APEL-LDRLARAGKAA 37 (279)
T ss_pred CccEEEEeCCCceEcCC-eeCcC-HHHH-HHHHHHCCCeE
Confidence 37899999999997744 33444 3333 56676667663
No 160
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=49.54 E-value=11 Score=36.14 Aligned_cols=33 Identities=21% Similarity=0.198 Sum_probs=0.0
Q ss_pred EEEecccceeccCccchHHHHHHHHHHHHHhcCCC
Q 010218 42 IGYDMDYTLMHYNVMAWEGRAYDYCMVNLRNMGFP 76 (515)
Q Consensus 42 iGFDmDyTLa~Y~~~~~e~L~y~~~~~~Lv~~gYP 76 (515)
|.||||+||+ ++..--.-....++++|.+.|.+
T Consensus 1 i~~DlDGTLl--~~~~~i~~~~~~al~~l~~~Gi~ 33 (225)
T TIGR01482 1 IASDIDGTLT--DPNRAINESALEAIRKAESVGIP 33 (225)
T ss_pred CeEeccCccC--CCCcccCHHHHHHHHHHHHCCCE
No 161
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=49.44 E-value=13 Score=35.39 Aligned_cols=16 Identities=25% Similarity=0.324 Sum_probs=14.3
Q ss_pred CcEEEEecccceeccC
Q 010218 39 ISAIGYDMDYTLMHYN 54 (515)
Q Consensus 39 i~~iGFDmDyTLa~Y~ 54 (515)
|++|-||||+||+.+.
T Consensus 2 ik~viFDldGtL~d~~ 17 (211)
T TIGR02247 2 IKAVIFDFGGVLLPSP 17 (211)
T ss_pred ceEEEEecCCceecCH
Confidence 6799999999999974
No 162
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=48.20 E-value=16 Score=34.84 Aligned_cols=23 Identities=30% Similarity=0.551 Sum_probs=19.3
Q ss_pred cCCCcEEEEecccceeccCccch
Q 010218 36 LRSISAIGYDMDYTLMHYNVMAW 58 (515)
Q Consensus 36 L~~i~~iGFDmDyTLa~Y~~~~~ 58 (515)
|..|+++.||+|+||....+...
T Consensus 1 ~~~~k~i~FD~d~TL~d~~~~~~ 23 (229)
T COG1011 1 MMMIKAILFDLDGTLLDFDSAEF 23 (229)
T ss_pred CCceeEEEEecCCcccccchHHh
Confidence 45789999999999999876643
No 163
>PRK11590 hypothetical protein; Provisional
Probab=48.19 E-value=13 Score=35.99 Aligned_cols=13 Identities=31% Similarity=0.358 Sum_probs=11.7
Q ss_pred CcEEEEeccccee
Q 010218 39 ISAIGYDMDYTLM 51 (515)
Q Consensus 39 i~~iGFDmDyTLa 51 (515)
-+++-||+|+||+
T Consensus 6 ~k~~iFD~DGTL~ 18 (211)
T PRK11590 6 RRVVFFDLDGTLH 18 (211)
T ss_pred ceEEEEecCCCCc
Confidence 4589999999999
No 164
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=47.02 E-value=20 Score=33.12 Aligned_cols=31 Identities=19% Similarity=0.259 Sum_probs=19.5
Q ss_pred EEEEecccceeccCccchHHHHHHHHHHHHHhcCCC
Q 010218 41 AIGYDMDYTLMHYNVMAWEGRAYDYCMVNLRNMGFP 76 (515)
Q Consensus 41 ~iGFDmDyTLa~Y~~~~~e~L~y~~~~~~Lv~~gYP 76 (515)
++-||+|+||+.... ..+....+-+...|+|
T Consensus 1 ~iiFD~DGTL~ds~~-----~~~~~~~~~~~~~g~~ 31 (185)
T TIGR01990 1 AVIFDLDGVITDTAE-----YHYLAWKALADELGIP 31 (185)
T ss_pred CeEEcCCCccccChH-----HHHHHHHHHHHHcCCC
Confidence 467999999997653 3333333334556766
No 165
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=46.84 E-value=20 Score=32.00 Aligned_cols=14 Identities=36% Similarity=0.430 Sum_probs=12.3
Q ss_pred cEEEEecccceecc
Q 010218 40 SAIGYDMDYTLMHY 53 (515)
Q Consensus 40 ~~iGFDmDyTLa~Y 53 (515)
+++-||+|+||...
T Consensus 1 kli~~DlD~Tl~~~ 14 (128)
T TIGR01681 1 KVIVFDLDNTLWTG 14 (128)
T ss_pred CEEEEeCCCCCCCC
Confidence 46889999999977
No 166
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=44.50 E-value=12 Score=35.35 Aligned_cols=17 Identities=29% Similarity=0.358 Sum_probs=14.7
Q ss_pred CcEEEEecccceeccCc
Q 010218 39 ISAIGYDMDYTLMHYNV 55 (515)
Q Consensus 39 i~~iGFDmDyTLa~Y~~ 55 (515)
|++|-||||+||+-+.+
T Consensus 1 ik~viFD~dgTLiD~~~ 17 (198)
T TIGR01428 1 IKALVFDVYGTLFDVHS 17 (198)
T ss_pred CcEEEEeCCCcCccHHH
Confidence 57899999999998764
No 167
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=42.67 E-value=21 Score=35.86 Aligned_cols=27 Identities=22% Similarity=0.199 Sum_probs=23.8
Q ss_pred CCCchHHHHHHHHhCceEEEEcCCCch
Q 010218 212 DPELPLALLDQKEAGKKLLLITNSDYH 238 (515)
Q Consensus 212 d~~l~~~L~~lr~~GKklFLlTNS~~~ 238 (515)
-|.-...+.+|+++|++++++||.+..
T Consensus 23 ~~~a~~al~~l~~~G~~~~~~Tn~~~~ 49 (257)
T TIGR01458 23 VPGSQEAVKRLRGASVKVRFVTNTTKE 49 (257)
T ss_pred CCCHHHHHHHHHHCCCeEEEEECCCCC
Confidence 567888999999999999999997665
No 168
>PLN02887 hydrolase family protein
Probab=42.20 E-value=26 Score=39.91 Aligned_cols=37 Identities=22% Similarity=0.126 Sum_probs=25.6
Q ss_pred CCcEEEEecccceeccCccchHHHHHHHHHHHHHhcCCC
Q 010218 38 SISAIGYDMDYTLMHYNVMAWEGRAYDYCMVNLRNMGFP 76 (515)
Q Consensus 38 ~i~~iGFDmDyTLa~Y~~~~~e~L~y~~~~~~Lv~~gYP 76 (515)
+|+.|.||||+||..-+.. ...-.. .++++|.+.|..
T Consensus 307 ~iKLIa~DLDGTLLn~d~~-Is~~t~-eAI~kl~ekGi~ 343 (580)
T PLN02887 307 KFSYIFCDMDGTLLNSKSQ-ISETNA-KALKEALSRGVK 343 (580)
T ss_pred CccEEEEeCCCCCCCCCCc-cCHHHH-HHHHHHHHCCCe
Confidence 6999999999999975432 222222 345667778887
No 169
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=41.51 E-value=14 Score=34.55 Aligned_cols=17 Identities=35% Similarity=0.348 Sum_probs=14.8
Q ss_pred CcEEEEecccceeccCc
Q 010218 39 ISAIGYDMDYTLMHYNV 55 (515)
Q Consensus 39 i~~iGFDmDyTLa~Y~~ 55 (515)
|+.+-||+|+||+.-.+
T Consensus 4 ~k~viFD~DGTLid~~~ 20 (201)
T TIGR01491 4 IKLIIFDLDGTLTDVMS 20 (201)
T ss_pred ceEEEEeCCCCCcCCcc
Confidence 78899999999998653
No 170
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=41.09 E-value=24 Score=33.45 Aligned_cols=59 Identities=24% Similarity=0.272 Sum_probs=0.0
Q ss_pred EEEecccceeccCccchHHHHHHHHHHHHHhcCCC---------------CCCCCCC-ccccccceEeecCCCcEEe
Q 010218 42 IGYDMDYTLMHYNVMAWEGRAYDYCMVNLRNMGFP---------------VEGLAFD-PDLVIRGLVIDKEKGNLVK 102 (515)
Q Consensus 42 iGFDmDyTLa~Y~~~~~e~L~y~~~~~~Lv~~gYP---------------~~~l~yd-p~F~iRGL~~D~~~GnlLK 102 (515)
|-||+|+||+.-...--+ .-..+++.|.+.|++ ...+..+ |--+..|-+++...|.++.
T Consensus 1 i~~DlDGTLl~~~~~i~~--~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~ 75 (254)
T PF08282_consen 1 IFSDLDGTLLNSDGKISP--ETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILY 75 (254)
T ss_dssp EEEECCTTTCSTTSSSCH--HHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEE
T ss_pred cEEEECCceecCCCeeCH--HHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccch
No 171
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=40.84 E-value=27 Score=32.69 Aligned_cols=40 Identities=23% Similarity=0.139 Sum_probs=23.4
Q ss_pred cEEEEecccceeccC--ccchHHH-HH---HHHHHHHHhcCCCCCC
Q 010218 40 SAIGYDMDYTLMHYN--VMAWEGR-AY---DYCMVNLRNMGFPVEG 79 (515)
Q Consensus 40 ~~iGFDmDyTLa~Y~--~~~~e~L-~y---~~~~~~Lv~~gYP~~~ 79 (515)
+++-||.|+||+..+ ....+.. .| ..+++.|.+.||+.-.
T Consensus 2 ~~~~~D~Dgtl~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~i 47 (176)
T TIGR00213 2 KAIFLDRDGTINIDHGYVHEIDNFEFIDGVIDALRELKKMGYALVL 47 (176)
T ss_pred CEEEEeCCCCEeCCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEE
Confidence 688999999999321 1112222 12 2244566778888543
No 172
>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=39.81 E-value=24 Score=33.81 Aligned_cols=44 Identities=18% Similarity=0.265 Sum_probs=33.1
Q ss_pred CCCHHHHHHHhC----cCCCcEEEEcCccccchhccccccCceEEeehH
Q 010218 305 GGSAQMIENSLN----IHGDEILYVGDHIYTDVSQSKVHLRWRTALICR 349 (515)
Q Consensus 305 gGn~~~l~~ll~----~~g~~VLY~GDHI~~Di~~skk~~gWrT~aIVp 349 (515)
+|....++.+.| ...++++.|||-+|.||+-+... |--++.+-|
T Consensus 121 ~ct~E~~~y~~~Nshv~~~se~~~vGDRlfTDI~~aN~m-Gs~gVw~~~ 168 (190)
T KOG2961|consen 121 ACTAEEVEYHFGNSHVCTSSELIMVGDRLFTDIVYANRM-GSLGVWTEP 168 (190)
T ss_pred CccHHHHHHHhCCcccCChhHeEEEccchhhhHhhhhhc-cceeEEecc
Confidence 566667777777 45789999999999999988765 544555443
No 173
>PRK08883 ribulose-phosphate 3-epimerase; Provisional
Probab=38.79 E-value=24 Score=35.10 Aligned_cols=128 Identities=15% Similarity=0.172 Sum_probs=75.3
Q ss_pred HHHHHHHHH----HHhccchhhhHHHHHcCccccccc---------------CCCchHHHHHHHHhCceEEEEcCCCchh
Q 010218 179 GLYKAVGKA----LFRAHVEGQLKSEIMSKPELFVEP---------------DPELPLALLDQKEAGKKLLLITNSDYHY 239 (515)
Q Consensus 179 ~l~~dv~~a----v~~vH~~G~lk~~v~~np~kYi~k---------------d~~l~~~L~~lr~~GKklFLlTNS~~~y 239 (515)
.+.+++++. ...|| -+.+||++||.. ++.+..+|..+|+.|+|.-|.-|-.-+.
T Consensus 47 ~~i~~i~~~~~~~~~dvH-------LMv~~p~~~i~~~~~~gad~i~~H~Ea~~~~~~~l~~ik~~g~k~GlalnP~Tp~ 119 (220)
T PRK08883 47 PICKALRDYGITAPIDVH-------LMVKPVDRIIPDFAKAGASMITFHVEASEHVDRTLQLIKEHGCQAGVVLNPATPL 119 (220)
T ss_pred HHHHHHHHhCCCCCEEEE-------eccCCHHHHHHHHHHhCCCEEEEcccCcccHHHHHHHHHHcCCcEEEEeCCCCCH
Confidence 355666653 24567 255678877633 3457788999999999999999887654
Q ss_pred hHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeEEEeCCCCceeccccc--CC---CccccCCCHH--HHH
Q 010218 240 TDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLYEVVTGEGLMRPCFKA--RT---GGLYSGGSAQ--MIE 312 (515)
Q Consensus 240 t~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~~v~~~~g~~~~~~~l--~~---g~vY~gGn~~--~l~ 312 (515)
... .++ -+.-|.|.+-+--|+|-.. +|.....+ +++...++ ++ -.|...|..+ .+.
T Consensus 120 ~~i--~~~-----------l~~~D~vlvMtV~PGfgGq--~fi~~~le--kI~~l~~~~~~~~~~~~I~vdGGI~~eni~ 182 (220)
T PRK08883 120 HHL--EYI-----------MDKVDLILLMSVNPGFGGQ--SFIPHTLD--KLRAVRKMIDESGRDIRLEIDGGVKVDNIR 182 (220)
T ss_pred HHH--HHH-----------HHhCCeEEEEEecCCCCCc--eecHhHHH--HHHHHHHHHHhcCCCeeEEEECCCCHHHHH
Confidence 332 233 3478999999999999643 33222111 11111111 11 2244555443 333
Q ss_pred HHhCcCCCcEEEEcCcccc
Q 010218 313 NSLNIHGDEILYVGDHIYT 331 (515)
Q Consensus 313 ~ll~~~g~~VLY~GDHI~~ 331 (515)
++ -..|.+++-+|=-||+
T Consensus 183 ~l-~~aGAd~vVvGSaIf~ 200 (220)
T PRK08883 183 EI-AEAGADMFVAGSAIFG 200 (220)
T ss_pred HH-HHcCCCEEEEeHHHhC
Confidence 33 3457888888866654
No 174
>PF00834 Ribul_P_3_epim: Ribulose-phosphate 3 epimerase family; InterPro: IPR000056 Ribulose-phosphate 3-epimerase (5.1.3.1 from EC) (also known as pentose-5-phosphate 3-epimerase or PPE) is the enzyme that converts D-ribulose 5-phosphate into D-xylulose 5-phosphate in Calvin's reductive pentose phosphate cycle. In Ralstonia eutropha (Alcaligenes eutrophus) two copies of the gene coding for PPE are known [], one is chromosomally encoded P40117 from SWISSPROT, the other one is on a plasmid Q04539 from SWISSPROT. PPE has been found in a wide range of bacteria, archaebacteria, fungi and plants. All the proteins have from 209 to 241 amino acid residues. The enzyme has a TIM barrel structure.; GO: 0004750 ribulose-phosphate 3-epimerase activity, 0005975 carbohydrate metabolic process; PDB: 3CTL_A 3CT7_D 3CU2_A 1RPX_A 3OVR_A 3OVP_A 3OVQ_B 3QC3_B 3INP_A 1TQJ_D ....
Probab=38.63 E-value=61 Score=31.81 Aligned_cols=51 Identities=24% Similarity=0.241 Sum_probs=37.6
Q ss_pred CCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCC
Q 010218 213 PELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQ 276 (515)
Q Consensus 213 ~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~ 276 (515)
+.+..++..+|+.|+|.-|.=|-...... + +.|-+..|.|.+-+-.|+|=.
T Consensus 92 ~~~~~~i~~ik~~g~k~GialnP~T~~~~------~-------~~~l~~vD~VlvMsV~PG~~G 142 (201)
T PF00834_consen 92 EDPKETIKYIKEAGIKAGIALNPETPVEE------L-------EPYLDQVDMVLVMSVEPGFGG 142 (201)
T ss_dssp TTHHHHHHHHHHTTSEEEEEE-TTS-GGG------G-------TTTGCCSSEEEEESS-TTTSS
T ss_pred hCHHHHHHHHHHhCCCEEEEEECCCCchH------H-------HHHhhhcCEEEEEEecCCCCc
Confidence 45677899999999999998887654422 1 347778999999999999754
No 175
>PLN02423 phosphomannomutase
Probab=37.78 E-value=35 Score=34.08 Aligned_cols=19 Identities=32% Similarity=0.350 Sum_probs=14.4
Q ss_pred CCCcEEE-EecccceeccCc
Q 010218 37 RSISAIG-YDMDYTLMHYNV 55 (515)
Q Consensus 37 ~~i~~iG-FDmDyTLa~Y~~ 55 (515)
++.+++. ||||+||+.-+-
T Consensus 4 ~~~~~i~~~D~DGTLl~~~~ 23 (245)
T PLN02423 4 RKPGVIALFDVDGTLTAPRK 23 (245)
T ss_pred CccceEEEEeccCCCcCCCC
Confidence 4566666 999999996553
No 176
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=37.67 E-value=41 Score=30.69 Aligned_cols=52 Identities=15% Similarity=0.241 Sum_probs=39.9
Q ss_pred ccccccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEE
Q 010218 206 ELFVEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVI 266 (515)
Q Consensus 206 ~kYi~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVI 266 (515)
..+|.+-|.+..+|..+.+. ..+++.|.+.-.|++.++..+. +. +.+|+-++
T Consensus 32 ~~~v~~RP~l~~FL~~l~~~-~ev~i~T~~~~~ya~~v~~~ld-------p~-~~~~~~~~ 83 (159)
T PF03031_consen 32 GYYVKLRPGLDEFLEELSKH-YEVVIWTSASEEYAEPVLDALD-------PN-GKLFSRRL 83 (159)
T ss_dssp EEEEEE-TTHHHHHHHHHHH-CEEEEE-SS-HHHHHHHHHHHT-------TT-TSSEEEEE
T ss_pred ceeEeeCchHHHHHHHHHHh-ceEEEEEeehhhhhhHHHHhhh-------hh-cccccccc
Confidence 46778889999999998554 7899999999999999999886 22 56776666
No 177
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=37.64 E-value=16 Score=34.70 Aligned_cols=28 Identities=25% Similarity=0.375 Sum_probs=16.1
Q ss_pred cCCCchHHHHHHHHhCceEEEEcCCCch
Q 010218 211 PDPELPLALLDQKEAGKKLLLITNSDYH 238 (515)
Q Consensus 211 kd~~l~~~L~~lr~~GKklFLlTNS~~~ 238 (515)
+-|.....|.+|.+.|-.+++||.++..
T Consensus 74 p~~gA~e~l~~L~~~g~~~~~Itar~~~ 101 (191)
T PF06941_consen 74 PIPGAVEALKKLRDKGHEIVIITARPPE 101 (191)
T ss_dssp B-TTHHHHHHHHHTSTTEEEEEEE-SSS
T ss_pred ccHHHHHHHHHHHHcCCcEEEEEecCcc
Confidence 4455666677777766555556666554
No 178
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=37.17 E-value=17 Score=34.79 Aligned_cols=11 Identities=45% Similarity=0.918 Sum_probs=0.0
Q ss_pred cEEEEecccce
Q 010218 40 SAIGYDMDYTL 50 (515)
Q Consensus 40 ~~iGFDmDyTL 50 (515)
+.|-||+||||
T Consensus 4 klvvFDLD~Tl 14 (169)
T PF12689_consen 4 KLVVFDLDYTL 14 (169)
T ss_dssp SEEEE-STTTS
T ss_pred cEEEEcCcCCC
No 179
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=36.91 E-value=36 Score=35.70 Aligned_cols=37 Identities=14% Similarity=0.273 Sum_probs=25.7
Q ss_pred CcEEEEecccceeccCccchHHHHHHHHHHHHHhcCCCC
Q 010218 39 ISAIGYDMDYTLMHYNVMAWEGRAYDYCMVNLRNMGFPV 77 (515)
Q Consensus 39 i~~iGFDmDyTLa~Y~~~~~e~L~y~~~~~~Lv~~gYP~ 77 (515)
.+.|-+|||+||..-+...++. +. -++++|.+.|-|.
T Consensus 1 ~KLIftDLDGTLLd~~~~~~~~-a~-~aL~~Lk~~GI~v 37 (302)
T PRK12702 1 MRLVLSSLDGSLLDLEFNSYGA-AR-QALAALERRSIPL 37 (302)
T ss_pred CcEEEEeCCCCCcCCCCcCCHH-HH-HHHHHHHHCCCEE
Confidence 3678899999999854433443 33 3467888889983
No 180
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=36.90 E-value=25 Score=32.52 Aligned_cols=35 Identities=14% Similarity=0.297 Sum_probs=31.6
Q ss_pred CCchHHHHHHHHhCceEEEEcCCCchhhHHhhccc
Q 010218 213 PELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHS 247 (515)
Q Consensus 213 ~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl 247 (515)
|+...++..++++|.+++++|.|+-.++..++..+
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~ 126 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERL 126 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHc
Confidence 77779999999999999999999999999998743
No 181
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=35.85 E-value=18 Score=36.36 Aligned_cols=13 Identities=31% Similarity=0.646 Sum_probs=11.5
Q ss_pred EEEEecccceecc
Q 010218 41 AIGYDMDYTLMHY 53 (515)
Q Consensus 41 ~iGFDmDyTLa~Y 53 (515)
+|+||+|+||+-=
T Consensus 65 aViFDlDgTLlDS 77 (237)
T TIGR01672 65 AVSFDIDDTVLFS 77 (237)
T ss_pred EEEEeCCCccccC
Confidence 9999999999853
No 182
>PRK06769 hypothetical protein; Validated
Probab=35.84 E-value=28 Score=32.72 Aligned_cols=46 Identities=15% Similarity=0.205 Sum_probs=28.6
Q ss_pred cCCCcEEEEecccceeccCccch-HHH-HHHH---HHHHHHhcCCCCCCCC
Q 010218 36 LRSISAIGYDMDYTLMHYNVMAW-EGR-AYDY---CMVNLRNMGFPVEGLA 81 (515)
Q Consensus 36 L~~i~~iGFDmDyTLa~Y~~~~~-e~L-~y~~---~~~~Lv~~gYP~~~l~ 81 (515)
|..|+++=||.|+||..+..-.+ ... .|.- +++.|.+.||+.-+++
T Consensus 1 ~~~~~~~~~d~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~T 51 (173)
T PRK06769 1 MTNIQAIFIDRDGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFT 51 (173)
T ss_pred CCCCcEEEEeCCCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEE
Confidence 56799999999999976633111 111 2333 3456677898865443
No 183
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=35.82 E-value=13 Score=33.92 Aligned_cols=16 Identities=31% Similarity=0.389 Sum_probs=13.5
Q ss_pred EEEEecccceeccCcc
Q 010218 41 AIGYDMDYTLMHYNVM 56 (515)
Q Consensus 41 ~iGFDmDyTLa~Y~~~ 56 (515)
++-||||+||+...+.
T Consensus 1 ~vlFDlDgtLv~~~~~ 16 (183)
T TIGR01509 1 AILFDLDGVLVDTSSA 16 (183)
T ss_pred CeeeccCCceechHHH
Confidence 4679999999998764
No 184
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=35.38 E-value=40 Score=35.83 Aligned_cols=57 Identities=18% Similarity=0.335 Sum_probs=44.4
Q ss_pred CCchHHHHHHHHhC-ceEEEEcCCCchhhHHhhcccccccCCCC----CCCCCCccEEEEcc
Q 010218 213 PELPLALLDQKEAG-KKLLLITNSDYHYTDKMMQHSFNRFLPND----MGWRDLFNMVIVSA 269 (515)
Q Consensus 213 ~~l~~~L~~lr~~G-KklFLlTNS~~~yt~~~M~yl~~~~~~~g----~dWrd~FDvVIv~A 269 (515)
|.+..|++.|-+.| .-+|-++||+|.+-...=.|+-.+.+|.| .+|-..||.|++.+
T Consensus 199 pGV~~~yr~l~~~~~apvfYvSnSPw~~f~~L~efi~~~~~P~GPl~L~~~g~~~~~i~~sg 260 (373)
T COG4850 199 PGVSAWYRALTNLGDAPVFYVSNSPWQLFPTLQEFITNRNFPYGPLLLRRWGGVLDNIIESG 260 (373)
T ss_pred CCHHHHHHHHHhcCCCCeEEecCChhHhHHHHHHHHhcCCCCCCchhHhhcCCcccccccch
Confidence 67888888887777 77999999999999999888887666766 36655666665543
No 185
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=35.35 E-value=32 Score=32.15 Aligned_cols=37 Identities=19% Similarity=0.203 Sum_probs=32.3
Q ss_pred CCCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccc
Q 010218 212 DPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSF 248 (515)
Q Consensus 212 d~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~ 248 (515)
.|....++.+++++|.+++++|.++|.-.+....|+-
T Consensus 29 ~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~ 65 (157)
T smart00775 29 HPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLS 65 (157)
T ss_pred CHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHH
Confidence 4678889999999999999999999999887777764
No 186
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=35.16 E-value=19 Score=33.72 Aligned_cols=18 Identities=33% Similarity=0.324 Sum_probs=15.1
Q ss_pred CcEEEEecccceeccCcc
Q 010218 39 ISAIGYDMDYTLMHYNVM 56 (515)
Q Consensus 39 i~~iGFDmDyTLa~Y~~~ 56 (515)
|+++-||+|+||..-+..
T Consensus 1 i~~i~fDktGTLt~~~~~ 18 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMS 18 (215)
T ss_dssp ESEEEEECCTTTBESHHE
T ss_pred CeEEEEecCCCcccCeEE
Confidence 689999999999876644
No 187
>PRK10444 UMP phosphatase; Provisional
Probab=34.38 E-value=34 Score=34.40 Aligned_cols=37 Identities=19% Similarity=0.153 Sum_probs=29.4
Q ss_pred cCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhccc
Q 010218 211 PDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHS 247 (515)
Q Consensus 211 kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl 247 (515)
.-|....++.+|++.||+++++||....=.....+.+
T Consensus 18 ~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 18 AVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred eCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 3678889999999999999999999986444444444
No 188
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=33.88 E-value=41 Score=33.61 Aligned_cols=51 Identities=12% Similarity=0.178 Sum_probs=31.3
Q ss_pred CCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEcc
Q 010218 213 PELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSA 269 (515)
Q Consensus 213 ~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A 269 (515)
|.-...|.+|++.|++++++||..-.-...+...+-. -.+..-.|-||+.+
T Consensus 20 ~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~------~g~~~~~~~iit~~ 70 (249)
T TIGR01457 20 PEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLAS------FDIPATLETVFTAS 70 (249)
T ss_pred cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH------cCCCCChhhEeeHH
Confidence 4678899999999999999998332222223333321 11334456677764
No 189
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=32.58 E-value=19 Score=33.09 Aligned_cols=14 Identities=29% Similarity=0.354 Sum_probs=11.8
Q ss_pred EEEEecccceeccC
Q 010218 41 AIGYDMDYTLMHYN 54 (515)
Q Consensus 41 ~iGFDmDyTLa~Y~ 54 (515)
++-||+|+||+-..
T Consensus 1 ~viFD~DGTL~D~~ 14 (175)
T TIGR01493 1 AMVFDVYGTLVDVH 14 (175)
T ss_pred CeEEecCCcCcccH
Confidence 46799999999765
No 190
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=32.48 E-value=40 Score=33.23 Aligned_cols=34 Identities=24% Similarity=0.249 Sum_probs=0.0
Q ss_pred EEEEecccceeccCccchHHHHHHHHHHHHHhcCCC
Q 010218 41 AIGYDMDYTLMHYNVMAWEGRAYDYCMVNLRNMGFP 76 (515)
Q Consensus 41 ~iGFDmDyTLa~Y~~~~~e~L~y~~~~~~Lv~~gYP 76 (515)
.+-||||+||..-+..--+.- -.++++|.+.|.+
T Consensus 1 li~~DlDGTLl~~~~~i~~~~--~~~i~~l~~~G~~ 34 (256)
T TIGR00099 1 LIFIDLDGTLLNDDHTISPST--KEALAKLREKGIK 34 (256)
T ss_pred CEEEeCCCCCCCCCCccCHHH--HHHHHHHHHCCCe
No 191
>PRK08745 ribulose-phosphate 3-epimerase; Provisional
Probab=31.71 E-value=38 Score=33.83 Aligned_cols=128 Identities=15% Similarity=0.163 Sum_probs=75.1
Q ss_pred HHHHHHHH----HHhccchhhhHHHHHcCccccccc---------------CCCchHHHHHHHHhCceEEEEcCCCchhh
Q 010218 180 LYKAVGKA----LFRAHVEGQLKSEIMSKPELFVEP---------------DPELPLALLDQKEAGKKLLLITNSDYHYT 240 (515)
Q Consensus 180 l~~dv~~a----v~~vH~~G~lk~~v~~np~kYi~k---------------d~~l~~~L~~lr~~GKklFLlTNS~~~yt 240 (515)
+.+++++. ...|| -..+||++||.. ++.+..+|..+|+.|.|.-|+-|-.-+-.
T Consensus 52 ~i~~lr~~~~~~~~dvH-------LMv~~P~~~i~~~~~~gad~I~~H~Ea~~~~~~~l~~Ir~~g~k~GlalnP~T~~~ 124 (223)
T PRK08745 52 VCQALRKHGITAPIDVH-------LMVEPVDRIVPDFADAGATTISFHPEASRHVHRTIQLIKSHGCQAGLVLNPATPVD 124 (223)
T ss_pred HHHHHHhhCCCCCEEEE-------eccCCHHHHHHHHHHhCCCEEEEcccCcccHHHHHHHHHHCCCceeEEeCCCCCHH
Confidence 55666653 14567 255677777632 34577889999999999999988764432
Q ss_pred HHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeEEEeCCCCceeccccc--C---CCccccCCCHH-HHHHH
Q 010218 241 DKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLYEVVTGEGLMRPCFKA--R---TGGLYSGGSAQ-MIENS 314 (515)
Q Consensus 241 ~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~~v~~~~g~~~~~~~l--~---~g~vY~gGn~~-~l~~l 314 (515)
. + .+++ ++.|.|.+-+--|+|-... |.+-.. .+++...++ + ...|..-|... +-.+.
T Consensus 125 ~-i-~~~l-----------~~vD~VlvMtV~PGf~GQ~--fi~~~l--~KI~~l~~~~~~~~~~~~IeVDGGI~~eti~~ 187 (223)
T PRK08745 125 I-L-DWVL-----------PELDLVLVMSVNPGFGGQA--FIPSAL--DKLRAIRKKIDALGKPIRLEIDGGVKADNIGA 187 (223)
T ss_pred H-H-HHHH-----------hhcCEEEEEEECCCCCCcc--ccHHHH--HHHHHHHHHHHhcCCCeeEEEECCCCHHHHHH
Confidence 2 2 2333 3789999999999998643 211000 011110011 1 12355555443 33334
Q ss_pred hCcCCCcEEEEcCcccc
Q 010218 315 LNIHGDEILYVGDHIYT 331 (515)
Q Consensus 315 l~~~g~~VLY~GDHI~~ 331 (515)
+-..|.+++-+|=-||+
T Consensus 188 l~~aGaDi~V~GSaiF~ 204 (223)
T PRK08745 188 IAAAGADTFVAGSAIFN 204 (223)
T ss_pred HHHcCCCEEEEChhhhC
Confidence 44457899999977764
No 192
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=30.56 E-value=47 Score=32.90 Aligned_cols=29 Identities=17% Similarity=0.200 Sum_probs=23.3
Q ss_pred HHHHHHHhCcC--CCcEEEEcCccccchhccc
Q 010218 308 AQMIENSLNIH--GDEILYVGDHIYTDVSQSK 337 (515)
Q Consensus 308 ~~~l~~ll~~~--g~~VLY~GDHI~~Di~~sk 337 (515)
...+++.+|.. ..++++|||..= |+---+
T Consensus 181 i~~l~~~~~i~~~~~~~~a~GD~~N-D~~Ml~ 211 (256)
T TIGR01486 181 ANALKQFYNQPGGAIKVVGLGDSPN-DLPLLE 211 (256)
T ss_pred HHHHHHHHhhcCCCceEEEEcCCHh-hHHHHH
Confidence 57788888988 889999999965 776554
No 193
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=30.40 E-value=74 Score=37.09 Aligned_cols=44 Identities=16% Similarity=0.109 Sum_probs=30.8
Q ss_pred CccccCCCcEEEEecccceeccCccchHHHHHHHHHHHHHhcCCCC
Q 010218 32 RTLNLRSISAIGYDMDYTLMHYNVMAWEGRAYDYCMVNLRNMGFPV 77 (515)
Q Consensus 32 r~l~L~~i~~iGFDmDyTLa~Y~~~~~e~L~y~~~~~~Lv~~gYP~ 77 (515)
+..+....++|-+|||+||..-+...... . ..++++|.+.|.|.
T Consensus 409 ~~~~~~~~KLIfsDLDGTLLd~d~~i~~~-t-~eAL~~L~ekGI~~ 452 (694)
T PRK14502 409 LPSSGQFKKIVYTDLDGTLLNPLTYSYST-A-LDALRLLKDKELPL 452 (694)
T ss_pred CCCcCceeeEEEEECcCCCcCCCCccCHH-H-HHHHHHHHHcCCeE
Confidence 45567788999999999999854432332 2 23566777889883
No 194
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=30.40 E-value=42 Score=31.42 Aligned_cols=40 Identities=20% Similarity=0.227 Sum_probs=22.7
Q ss_pred CCcEEEEecccceeccCccchHH-H----HH---HHHHHHHHhcCCCCC
Q 010218 38 SISAIGYDMDYTLMHYNVMAWEG-R----AY---DYCMVNLRNMGFPVE 78 (515)
Q Consensus 38 ~i~~iGFDmDyTLa~Y~~~~~e~-L----~y---~~~~~~Lv~~gYP~~ 78 (515)
-++++-||+|+|| ..+...|.. + .| ..+++.|.+.||+.-
T Consensus 2 ~~~~~~~d~~~t~-~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~g~~l~ 49 (181)
T PRK08942 2 SMKAIFLDRDGVI-NVDSDGYVKSPDEWIPIPGSIEAIARLKQAGYRVV 49 (181)
T ss_pred CccEEEEECCCCc-ccCCccccCCHHHeEECCCHHHHHHHHHHCCCEEE
Confidence 4688999999998 444433322 1 12 223445556677643
No 195
>cd06280 PBP1_LacI_like_4 Ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. This group includes the ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.
Probab=29.93 E-value=99 Score=29.90 Aligned_cols=25 Identities=28% Similarity=0.550 Sum_probs=19.5
Q ss_pred CCCeeEecCcc------------cc---CCCcEEEEeccc
Q 010218 24 SPRGIFCSRTL------------NL---RSISAIGYDMDY 48 (515)
Q Consensus 24 ~~~~VF~nr~l------------~L---~~i~~iGFDmDy 48 (515)
.+..|||++.- .+ ++|.++|||-+.
T Consensus 172 ~~~ai~~~~d~~a~g~~~~l~~~g~~~p~di~iig~d~~~ 211 (263)
T cd06280 172 RPEALVASNGLLLLGALRAVRAAGLRIPQDLALAGFDNDP 211 (263)
T ss_pred CCcEEEECCcHHHHHHHHHHHHcCCCCCCcEEEEEeCChh
Confidence 57899999763 12 689999999875
No 196
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=29.50 E-value=58 Score=30.55 Aligned_cols=40 Identities=20% Similarity=0.105 Sum_probs=23.5
Q ss_pred cEEEEecccceeccCc-----cchHHH-HHHHH---HHHHHhcCCCCCC
Q 010218 40 SAIGYDMDYTLMHYNV-----MAWEGR-AYDYC---MVNLRNMGFPVEG 79 (515)
Q Consensus 40 ~~iGFDmDyTLa~Y~~-----~~~e~L-~y~~~---~~~Lv~~gYP~~~ 79 (515)
+++.||.|+||..=++ ...+.+ .|..+ +++|.+.||+.-.
T Consensus 2 ~~~~~d~dg~l~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~g~~l~I 50 (161)
T TIGR01261 2 KILFIDRDGTLIEEPPSDFQVDALEKLRFEKGVIPALLKLKKAGYKFVM 50 (161)
T ss_pred CEEEEeCCCCccccCCCccccCCHHHeeECCCHHHHHHHHHHCCCeEEE
Confidence 5789999999988332 111222 12223 4556677888443
No 197
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=28.63 E-value=22 Score=33.83 Aligned_cols=12 Identities=25% Similarity=0.479 Sum_probs=10.0
Q ss_pred EEEecccceecc
Q 010218 42 IGYDMDYTLMHY 53 (515)
Q Consensus 42 iGFDmDyTLa~Y 53 (515)
+-||||+||+--
T Consensus 1 iiFDlDGTL~Ds 12 (205)
T TIGR01454 1 VVFDLDGVLVDS 12 (205)
T ss_pred CeecCcCccccC
Confidence 469999999864
No 198
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=28.09 E-value=29 Score=34.43 Aligned_cols=39 Identities=23% Similarity=0.184 Sum_probs=25.1
Q ss_pred HHHHHHhCcCCCcEEEEcCccccchhccccc----cCc--eEEeeh
Q 010218 309 QMIENSLNIHGDEILYVGDHIYTDVSQSKVH----LRW--RTALIC 348 (515)
Q Consensus 309 ~~l~~ll~~~g~~VLY~GDHI~~Di~~skk~----~gW--rT~aIV 348 (515)
..+.+.++.....++||||.. .|+---+.. .+| .++.|.
T Consensus 173 ~~~~~~~~~~~~~~i~iGD~~-~D~~~~~~~~~~~~~~g~~~v~v~ 217 (244)
T TIGR00685 173 KRLLWHQPGSGISPVYLGDDI-TDEDAFRVVNNQWGNYGFYPVPIG 217 (244)
T ss_pred HHHHHhcccCCCceEEEcCCC-cHHHHHHHHhcccCCCCeEEEEEe
Confidence 456666777778999999954 466655433 233 466664
No 199
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=27.77 E-value=46 Score=39.68 Aligned_cols=95 Identities=14% Similarity=0.187 Sum_probs=61.6
Q ss_pred CCchHHHHHHHHhCceEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCCCCCCCCeEEEeCCCCcee
Q 010218 213 PELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEFFQMSHPLYEVVTGEGLMR 292 (515)
Q Consensus 213 ~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~FF~~~~pf~~v~~~~g~~~ 292 (515)
|+.+..+.+++++|.++.++|+-+-.-+..+..-+- ..+.++.+|++.. +...+. ..+.
T Consensus 531 ~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~G---------i~~~~~~~v~g~~----------l~~~~~--~~l~ 589 (884)
T TIGR01522 531 PGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLG---------MPSKTSQSVSGEK----------LDAMDD--QQLS 589 (884)
T ss_pred hHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcC---------CCCCCCceeEhHH----------hHhCCH--HHHH
Confidence 578899999999999999999999999999887552 1122333443221 111110 0111
Q ss_pred cccccCCCccccCCCHHH---HHHHhCcCCCcEEEEcCccc
Q 010218 293 PCFKARTGGLYSGGSAQM---IENSLNIHGDEILYVGDHIY 330 (515)
Q Consensus 293 ~~~~l~~g~vY~gGn~~~---l~~ll~~~g~~VLY~GDHI~ 330 (515)
. .+.+..||+.=+..+ +-+.++..|..|+++||-+-
T Consensus 590 ~--~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvGDGvN 628 (884)
T TIGR01522 590 Q--IVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVN 628 (884)
T ss_pred H--HhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCcc
Confidence 1 134567887777765 44455667899999999763
No 200
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=27.36 E-value=40 Score=33.11 Aligned_cols=28 Identities=21% Similarity=-0.127 Sum_probs=14.4
Q ss_pred EecccceeccCccchHHHHHHHHHHHHH
Q 010218 44 YDMDYTLMHYNVMAWEGRAYDYCMVNLR 71 (515)
Q Consensus 44 FDmDyTLa~Y~~~~~e~L~y~~~~~~Lv 71 (515)
||+|+||+-+.+..........+++.|.
T Consensus 2 lDyDGTL~p~~~~p~~~~~~~~~~~~L~ 29 (235)
T PF02358_consen 2 LDYDGTLAPIVDDPDAAVPPPELRELLR 29 (235)
T ss_dssp EE-TTTSS---S-GGG----HHHHHHHH
T ss_pred cccCCccCCCCCCccccCCCHHHHHHHH
Confidence 7999999999986666666666666554
No 201
>PF08444 Gly_acyl_tr_C: Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region; InterPro: IPR013652 This entry represents mammalian-specific glycine N-acyltransferase (also called aralkyl acyl-CoA:amino acid N-acyltransferase; 2.3.1.13 from EC). Mitochondrial acyltransferases catalyse the transfer of an acyl group from acyl-CoA to the N terminus of glycine to produce N-acylglycine. These enzymes can conjugate a multitude of substrates to form a variety of N-acylglycines. The CoA derivatives of a number of aliphatic and aromatic acids, but not phenylacetyl-CoA or (indol-3-yl)acetyl-CoA, can act as donor [, ].
Probab=27.13 E-value=58 Score=28.17 Aligned_cols=32 Identities=28% Similarity=0.413 Sum_probs=26.7
Q ss_pred cccceeccCccchHHHHHHHHHHHHHhcCCCC
Q 010218 46 MDYTLMHYNVMAWEGRAYDYCMVNLRNMGFPV 77 (515)
Q Consensus 46 mDyTLa~Y~~~~~e~L~y~~~~~~Lv~~gYP~ 77 (515)
|=|||-.|+-.-+...+--...++|.+.|||.
T Consensus 24 mgyTlPeyR~~G~~~~v~~~~~~~L~~~g~P~ 55 (89)
T PF08444_consen 24 MGYTLPEYRGQGLMSQVMYHLAQYLHKLGFPF 55 (89)
T ss_pred ccccCHhHhcCCHHHHHHHHHHHHHHHCCCCe
Confidence 67899999988887777666678899999994
No 202
>PRK10671 copA copper exporting ATPase; Provisional
Probab=27.06 E-value=52 Score=38.88 Aligned_cols=35 Identities=17% Similarity=0.299 Sum_probs=30.5
Q ss_pred CCchHHHHHHHHhCceEEEEcCCCchhhHHhhccc
Q 010218 213 PELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHS 247 (515)
Q Consensus 213 ~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl 247 (515)
|.....+.+|++.|.++.++|+.+-..+..+...+
T Consensus 653 ~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~l 687 (834)
T PRK10671 653 SDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEA 687 (834)
T ss_pred hhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc
Confidence 45667889999999999999999999999988854
No 203
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=27.03 E-value=53 Score=29.81 Aligned_cols=39 Identities=21% Similarity=0.247 Sum_probs=23.5
Q ss_pred cEEEEecccceeccCccch----HHH-HHHH---HHHHHHhcCCCCC
Q 010218 40 SAIGYDMDYTLMHYNVMAW----EGR-AYDY---CMVNLRNMGFPVE 78 (515)
Q Consensus 40 ~~iGFDmDyTLa~Y~~~~~----e~L-~y~~---~~~~Lv~~gYP~~ 78 (515)
+++-||+|+||+.=++..+ ..+ .|+. +++.|.+.||+.-
T Consensus 1 ~~~~~d~dgtl~~~~~~~~~~~~~~~~~~~g~~~~l~~Lk~~g~~~~ 47 (147)
T TIGR01656 1 PALFLDRDGVINEDTVSDYPRSLDDWQLRPGAVPALLTLRAAGYTVV 47 (147)
T ss_pred CeEEEeCCCceeccCCcccCCCHHHeEEcCChHHHHHHHHHCCCEEE
Confidence 4788999999998876332 111 1332 3445556777743
No 204
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=26.95 E-value=40 Score=37.94 Aligned_cols=41 Identities=20% Similarity=0.343 Sum_probs=26.2
Q ss_pred CCCcEEEEecccceeccCc--------cchHHHHHHHHHH---HHHhcCCCCC
Q 010218 37 RSISAIGYDMDYTLMHYNV--------MAWEGRAYDYCMV---NLRNMGFPVE 78 (515)
Q Consensus 37 ~~i~~iGFDmDyTLa~Y~~--------~~~e~L~y~~~~~---~Lv~~gYP~~ 78 (515)
...+++.||+|+||+.-++ ..|+ +.|..+.+ .|.+.||+.-
T Consensus 166 ~~~Kia~fD~DGTLi~t~sg~~~~~~~~d~~-~l~pgV~e~L~~L~~~Gy~Iv 217 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTKSGKVFPKGPDDWQ-IIFPEIPEKLKELEADGFKIC 217 (526)
T ss_pred ccCcEEEEECCCCccccCCCccCCCCHHHee-ecccCHHHHHHHHHHCCCEEE
Confidence 5679999999999997543 1121 23444444 4556788743
No 205
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=26.85 E-value=66 Score=30.12 Aligned_cols=49 Identities=18% Similarity=0.123 Sum_probs=31.5
Q ss_pred eEecCccccCCCcEEEEecccceeccCc-cchHHHHHHHHHHHHHhcCCCCCC
Q 010218 28 IFCSRTLNLRSISAIGYDMDYTLMHYNV-MAWEGRAYDYCMVNLRNMGFPVEG 79 (515)
Q Consensus 28 VF~nr~l~L~~i~~iGFDmDyTLa~Y~~-~~~e~L~y~~~~~~Lv~~gYP~~~ 79 (515)
|..+. |.-..++++-+|+|+||..++. ..+.. ...+++.|.+.|++.-+
T Consensus 15 i~~~~-~~~~~v~~vv~D~Dgtl~~~~~~~~~pg--v~e~L~~Lk~~g~~l~I 64 (170)
T TIGR01668 15 LTIDL-LKKVGIKGVVLDKDNTLVYPDHNEAYPA--LRDWIEELKAAGRKLLI 64 (170)
T ss_pred CCHHH-HHHCCCCEEEEecCCccccCCCCCcChh--HHHHHHHHHHcCCEEEE
Confidence 33343 3446899999999999998876 23332 12345667777877443
No 206
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=26.70 E-value=51 Score=32.04 Aligned_cols=38 Identities=32% Similarity=0.443 Sum_probs=28.7
Q ss_pred chhhhHHHHHcCccccccc------CCCchHHHHHHHHhCceEEEEcC
Q 010218 193 VEGQLKSEIMSKPELFVEP------DPELPLALLDQKEAGKKLLLITN 234 (515)
Q Consensus 193 ~~G~lk~~v~~np~kYi~k------d~~l~~~L~~lr~~GKklFLlTN 234 (515)
++|++ + .++.-||++ .|...+.|.+|++.|-++.++||
T Consensus 12 RDGti---n-~d~~~yv~~~~~~~~~~g~i~al~~l~~~gy~lVvvTN 55 (181)
T COG0241 12 RDGTI---N-IDKGDYVDSLDDFQFIPGVIPALLKLQRAGYKLVVVTN 55 (181)
T ss_pred CCCce---e-cCCCcccCcHHHhccCccHHHHHHHHHhCCCeEEEEEC
Confidence 56654 2 222227765 67888999999999999999999
No 207
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=26.29 E-value=53 Score=34.45 Aligned_cols=56 Identities=23% Similarity=0.310 Sum_probs=39.1
Q ss_pred cccCCCHHHHHHHh----CcCCCcEEEEcCccccchhccccccCceEEeehHhhHHHHHHH
Q 010218 302 LYSGGSAQMIENSL----NIHGDEILYVGDHIYTDVSQSKVHLRWRTALICRELEEEYNAL 358 (515)
Q Consensus 302 vY~gGn~~~l~~ll----~~~g~~VLY~GDHI~~Di~~skk~~gWrT~aIVpELe~Ei~~~ 358 (515)
++.|=-...+.+.+ +..-++.|.|||-+=+||+-.+ .+|..|.+|.-=...|-.+.
T Consensus 220 ~v~GKP~~~m~~~l~~~~~i~psRt~mvGDRL~TDIlFG~-~~G~~TLLvltGv~~led~~ 279 (306)
T KOG2882|consen 220 IVLGKPSTFMFEYLLEKFNIDPSRTCMVGDRLDTDILFGK-NCGFKTLLVLSGVTTLEDIL 279 (306)
T ss_pred eecCCCCHHHHHHHHHHcCCCcceEEEEcccchhhhhHhh-ccCcceEEEecCcCcHHHHH
Confidence 44444444444443 5567899999999999999886 46999999976554444443
No 208
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=24.89 E-value=68 Score=30.30 Aligned_cols=32 Identities=25% Similarity=0.343 Sum_probs=0.0
Q ss_pred EEEecccceeccCccchHHHHHHHHHHHHHhcC
Q 010218 42 IGYDMDYTLMHYNVMAWEGRAYDYCMVNLRNMG 74 (515)
Q Consensus 42 iGFDmDyTLa~Y~~~~~e~L~y~~~~~~Lv~~g 74 (515)
+-||+|+||+.-+......-.. .++++|.+.|
T Consensus 2 i~~D~DgTL~~~~~~~~~~~~~-~~l~~l~~~g 33 (204)
T TIGR01484 2 LFFDLDGTLLDPNAHELSPETI-EALERLREAG 33 (204)
T ss_pred EEEeCcCCCcCCCCCcCCHHHH-HHHHHHHHCC
No 209
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=24.84 E-value=28 Score=33.90 Aligned_cols=12 Identities=17% Similarity=0.199 Sum_probs=10.2
Q ss_pred EEEEecccceec
Q 010218 41 AIGYDMDYTLMH 52 (515)
Q Consensus 41 ~iGFDmDyTLa~ 52 (515)
.+-||||+||+.
T Consensus 3 la~FDlD~TLi~ 14 (203)
T TIGR02137 3 IACLDLEGVLVP 14 (203)
T ss_pred EEEEeCCcccHH
Confidence 367999999994
No 210
>TIGR02417 fruct_sucro_rep D-fructose-responsive transcription factor. Members of this family belong the lacI helix-turn-helix family (pfam00356) of DNA-binding transcriptional regulators. All members are from the proteobacteria. Characterized members act as positive and negative transcriptional regulators of fructose and sucrose transport and metabolism. Sucrose is a disaccharide composed of fructose and glucose; D-fructose-1-phosphate rather than an intact sucrose moiety has been shown to act as the inducer.
Probab=24.64 E-value=72 Score=32.21 Aligned_cols=66 Identities=12% Similarity=0.149 Sum_probs=36.8
Q ss_pred CCCeeEecCcc-c---------c----CCCcEEEEecccceeccCccch-------HHHHHH---HHHHHHHhcCCCCCC
Q 010218 24 SPRGIFCSRTL-N---------L----RSISAIGYDMDYTLMHYNVMAW-------EGRAYD---YCMVNLRNMGFPVEG 79 (515)
Q Consensus 24 ~~~~VF~nr~l-~---------L----~~i~~iGFDmDyTLa~Y~~~~~-------e~L~y~---~~~~~Lv~~gYP~~~ 79 (515)
.+..|||.+.. . + ++|.++||| |.-++.|-.|.+ +.++.. ++.+++.....+...
T Consensus 238 ~~~Ai~~~~D~~A~g~~~al~~~g~vP~dvsvigfd-~~~~~~~~~p~lTti~~~~~~~g~~a~~~l~~~i~~~~~~~~~ 316 (327)
T TIGR02417 238 LPQALFTTSYTLLEGVLDYMLERPLLDSQLHLATFG-DNYLLDFLPLPINSVAQQHRQLAWHALELALAAIDGKKPEPGQ 316 (327)
T ss_pred CCcEEEEcCcHHHHHHHHHHHHcCCCCCcceEEEEC-CchHHHccCCCceEEeCCHHHHHHHHHHHHHHHhcCCCCCCce
Confidence 36799998631 1 1 489999999 666777755433 344433 333333221222222
Q ss_pred CCCCccccccc
Q 010218 80 LAFDPDLVIRG 90 (515)
Q Consensus 80 l~ydp~F~iRG 90 (515)
....|.+.+||
T Consensus 317 ~~i~~~li~r~ 327 (327)
T TIGR02417 317 RYIPRTLQIRH 327 (327)
T ss_pred EEeccEEEecC
Confidence 33567777776
No 211
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=24.62 E-value=95 Score=31.45 Aligned_cols=54 Identities=17% Similarity=0.182 Sum_probs=38.6
Q ss_pred CCcEEEEecccceeccCccchHHHHHHHHHHHHH-hcCCCCCCC-----CC--CccccccceE
Q 010218 38 SISAIGYDMDYTLMHYNVMAWEGRAYDYCMVNLR-NMGFPVEGL-----AF--DPDLVIRGLV 92 (515)
Q Consensus 38 ~i~~iGFDmDyTLa~Y~~~~~e~L~y~~~~~~Lv-~~gYP~~~l-----~y--dp~F~iRGL~ 92 (515)
+++|+=||+|-||-.=+.. ...+.-+.+.+.++ +.|.|++.- .| .-.-.++||+
T Consensus 14 ~~~~l~FDiDdtLYp~St~-i~~~~~~nI~~f~~eklgi~~e~a~~L~~~~yk~YG~t~aGL~ 75 (244)
T KOG3109|consen 14 NYKCLFFDIDDTLYPLSTG-IQLMMRNNIQEFFVEKLGISEEEAEELRESLYKEYGLTMAGLK 75 (244)
T ss_pred cceEEEEecccccccCchh-HHHHHHHHHHHHHHHHhCCChhhhHHHHHHHHHHHhHHHHHHH
Confidence 7899999999999776654 55566666667776 589997642 22 2334678887
No 212
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=24.30 E-value=39 Score=32.05 Aligned_cols=18 Identities=17% Similarity=0.086 Sum_probs=15.3
Q ss_pred cCCCcEEEEecccceecc
Q 010218 36 LRSISAIGYDMDYTLMHY 53 (515)
Q Consensus 36 L~~i~~iGFDmDyTLa~Y 53 (515)
++.|+.+-||+|+||..-
T Consensus 18 ~~~ikli~~D~Dgtl~~~ 35 (183)
T PRK09484 18 AENIRLLICDVDGVFSDG 35 (183)
T ss_pred hhCceEEEEcCCeeeecC
Confidence 346999999999999964
No 213
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=23.76 E-value=53 Score=32.29 Aligned_cols=15 Identities=27% Similarity=0.330 Sum_probs=12.9
Q ss_pred CCcEEEEecccceec
Q 010218 38 SISAIGYDMDYTLMH 52 (515)
Q Consensus 38 ~i~~iGFDmDyTLa~ 52 (515)
..+.+-||||+||+.
T Consensus 4 ~~~L~vFD~D~TLi~ 18 (212)
T COG0560 4 MKKLAVFDLDGTLIN 18 (212)
T ss_pred ccceEEEecccchhh
Confidence 456788999999998
No 214
>PF10146 zf-C4H2: Zinc finger-containing protein ; InterPro: IPR018482 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents a family of proteins which appears to have a highly conserved zinc finger domain at the C-terminal end, described as -C-X2-CH-X3-H-X5-C-X2-C-. The structure is predicted to contain a coiled coil. Members of this family are annotated as being tumour-associated antigen HCA127 in humans, but this could not be confirmed.
Probab=23.50 E-value=6.5e+02 Score=25.38 Aligned_cols=13 Identities=23% Similarity=0.363 Sum_probs=7.2
Q ss_pred ehHhhHHHHHHHH
Q 010218 347 ICRELEEEYNALI 359 (515)
Q Consensus 347 IVpELe~Ei~~~~ 359 (515)
.|.|+..|++.+.
T Consensus 33 ~L~e~~kE~~~L~ 45 (230)
T PF10146_consen 33 CLEEYRKEMEELL 45 (230)
T ss_pred HHHHHHHHHHHHH
Confidence 3555666666554
No 215
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=23.39 E-value=74 Score=32.68 Aligned_cols=37 Identities=14% Similarity=0.110 Sum_probs=29.4
Q ss_pred cCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhccc
Q 010218 211 PDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHS 247 (515)
Q Consensus 211 kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl 247 (515)
.-|....+|..+++.|.++|++||.+-...+.+...+
T Consensus 119 ~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~L 155 (266)
T TIGR01533 119 PVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNL 155 (266)
T ss_pred cCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHH
Confidence 3467888999999999999999999866666555444
No 216
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=23.26 E-value=7.6e+02 Score=24.65 Aligned_cols=59 Identities=14% Similarity=0.091 Sum_probs=49.6
Q ss_pred HHhccchhhhHHHHHcCcccccccCCCchHHHHHHHHhCceEEEEcCCCchhhHHhhccccc
Q 010218 188 LFRAHVEGQLKSEIMSKPELFVEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFN 249 (515)
Q Consensus 188 v~~vH~~G~lk~~v~~np~kYi~kd~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl~~ 249 (515)
...+|.+ + +++.+.+.+=|.-||...++....++++-.+.+++..-=.|+..+.+-++|
T Consensus 54 f~~i~~s--~-~Eile~llk~i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivg 112 (220)
T COG4359 54 FGSIHSS--L-EEILEFLLKDIKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVG 112 (220)
T ss_pred HHhcCCC--H-HHHHHHHHhhcccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhcc
Confidence 3567754 4 789999999888999999999999999998888888888888888887774
No 217
>PF07058 Myosin_HC-like: Myosin II heavy chain-like; InterPro: IPR009768 This family represents a conserved region within a number of myosin II heavy chain-like proteins that seem to be specific to Arabidopsis thaliana.
Probab=22.98 E-value=5.1e+02 Score=27.53 Aligned_cols=40 Identities=25% Similarity=0.277 Sum_probs=26.0
Q ss_pred hHhhHHHHH----HHHhhhHHHHHHHHHHhHHHHHHHHHHHHHH
Q 010218 348 CRELEEEYN----ALINSRGQRARLVELINQKEVVGDLFNQLRL 387 (515)
Q Consensus 348 VpELe~Ei~----~~~~~~~~~~~l~~l~~~~~~l~~~~~~l~~ 387 (515)
|.|||.=|- +.+--++|++++.+|...+..|+..+.+.+.
T Consensus 44 i~ELEEaiLagGaaaNavrdYqrq~~elneEkrtLeRELARaKV 87 (351)
T PF07058_consen 44 IRELEEAILAGGAAANAVRDYQRQVQELNEEKRTLERELARAKV 87 (351)
T ss_pred HHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 566665442 2333478999999888777777766655544
No 218
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=22.79 E-value=43 Score=32.40 Aligned_cols=15 Identities=27% Similarity=0.215 Sum_probs=13.3
Q ss_pred EEEEecccceeccCc
Q 010218 41 AIGYDMDYTLMHYNV 55 (515)
Q Consensus 41 ~iGFDmDyTLa~Y~~ 55 (515)
+|.||+|+||+....
T Consensus 5 ~vifDfDgTi~~~d~ 19 (219)
T PRK09552 5 QIFCDFDGTITNNDN 19 (219)
T ss_pred EEEEcCCCCCCcchh
Confidence 789999999998864
No 219
>cd06270 PBP1_GalS_like Ligand binding domain of DNA transcription iso-repressor GalS, which is one of two regulatory proteins involved in galactose transport and metabolism. Ligand binding domain of DNA transcription iso-repressor GalS, which is one of two regulatory proteins involved in galactose transport and metabolism. Transcription of the galactose regulon genes is regulated by Gal iso-repressor (GalS) and Gal repressor (GalR) in different ways, but both repressors recognize the same DNA binding site in the absence of D-galactose. GalS is a dimeric protein like GalR,and its major role is in regulating expression of the high-affinity galactose transporter encoded by the mgl operon, whereas GalR is the exclusive regulator of galactose permease, the low-affinity galactose transporter. GalS and GalR are members of the LacI-GalR family of transcription regulators and both contain the type I periplasmic binding protein-like fold. Hence, they are homologous to the periplasmic sugar bindi
Probab=22.36 E-value=2.3e+02 Score=27.35 Aligned_cols=24 Identities=25% Similarity=0.652 Sum_probs=17.7
Q ss_pred CCCeeEecCc-c-----------cc---CCCcEEEEecc
Q 010218 24 SPRGIFCSRT-L-----------NL---RSISAIGYDMD 47 (515)
Q Consensus 24 ~~~~VF~nr~-l-----------~L---~~i~~iGFDmD 47 (515)
.+..|||+.. + .+ ++|.++|||-+
T Consensus 177 ~~~ai~~~~d~~a~g~~~~l~~~g~~ip~di~v~g~d~~ 215 (268)
T cd06270 177 PFTAVFCANDEMAAGAISALREHGISVPQDVSIIGFDDV 215 (268)
T ss_pred CCCEEEEcCcHHHHHHHHHHHHcCCCCCCceeEEEecCc
Confidence 4689999864 1 22 58999999965
No 220
>COG4308 LimA Limonene-1,2-epoxide hydrolase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=22.09 E-value=23 Score=32.35 Aligned_cols=9 Identities=44% Similarity=1.169 Sum_probs=7.5
Q ss_pred CCCCCCccE
Q 010218 256 MGWRDLFNM 264 (515)
Q Consensus 256 ~dWrd~FDv 264 (515)
.-||||||+
T Consensus 111 ~~WRDYFDv 119 (130)
T COG4308 111 VLWRDYFDV 119 (130)
T ss_pred EeehhhhhH
Confidence 369999996
No 221
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=21.93 E-value=37 Score=37.07 Aligned_cols=16 Identities=38% Similarity=0.586 Sum_probs=13.9
Q ss_pred CcEEEEecccceeccC
Q 010218 39 ISAIGYDMDYTLMHYN 54 (515)
Q Consensus 39 i~~iGFDmDyTLa~Y~ 54 (515)
++++=||||+||+.=.
T Consensus 241 ~k~vIFDlDGTLiDs~ 256 (459)
T PRK06698 241 LQALIFDMDGTLFQTD 256 (459)
T ss_pred hhheeEccCCceecch
Confidence 6899999999999743
No 222
>PF13304 AAA_21: AAA domain; PDB: 3QKS_B 1US8_B 1F2U_B 1F2T_B 3QKT_A 1II8_B 3QKR_B 3QKU_A.
Probab=21.78 E-value=27 Score=32.27 Aligned_cols=37 Identities=19% Similarity=0.397 Sum_probs=25.1
Q ss_pred HHcCcccccccC--CCchHHHHHHHHhCceEEEEcCCCc
Q 010218 201 IMSKPELFVEPD--PELPLALLDQKEAGKKLLLITNSDY 237 (515)
Q Consensus 201 v~~np~kYi~kd--~~l~~~L~~lr~~GKklFLlTNS~~ 237 (515)
+.++||-++|+. ..+..+|..+.+.+.++|+.|-|++
T Consensus 262 liDEpE~~LHp~~q~~l~~~l~~~~~~~~QviitTHSp~ 300 (303)
T PF13304_consen 262 LIDEPENHLHPSWQRKLIELLKELSKKNIQVIITTHSPF 300 (303)
T ss_dssp EEESSSTTSSHHHHHHHHHHHHHTGGGSSEEEEEES-GG
T ss_pred EecCCcCCCCHHHHHHHHHHHHhhCccCCEEEEeCccch
Confidence 578899999885 3344445444445679999999975
No 223
>KOG3284 consensus Vacuolar sorting protein VPS28 [Intracellular trafficking, secretion, and vesicular transport]
Probab=21.57 E-value=3.2e+02 Score=27.04 Aligned_cols=16 Identities=31% Similarity=0.200 Sum_probs=13.1
Q ss_pred hHhhHHHHHHHHhhhH
Q 010218 348 CRELEEEYNALINSRG 363 (515)
Q Consensus 348 VpELe~Ei~~~~~~~~ 363 (515)
=|+|..|...|++.++
T Consensus 5 ~~~l~~Evkl~~N~re 20 (213)
T KOG3284|consen 5 NPLLYEEVKLFNNARE 20 (213)
T ss_pred cHHHHHHHHHhhchhH
Confidence 4899999999987554
No 224
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=21.00 E-value=85 Score=31.00 Aligned_cols=35 Identities=20% Similarity=0.301 Sum_probs=25.4
Q ss_pred CCchHHHHHHHHhCceEEEEcCCCchhhHHhhccc
Q 010218 213 PELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHS 247 (515)
Q Consensus 213 ~~l~~~L~~lr~~GKklFLlTNS~~~yt~~~M~yl 247 (515)
|.-..++..++++|++++++||+.-.=...+..++
T Consensus 17 ~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l 51 (236)
T TIGR01460 17 PGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKL 51 (236)
T ss_pred cCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHH
Confidence 46678899999999999999988744333333333
No 225
>PTZ00445 p36-lilke protein; Provisional
Probab=20.83 E-value=47 Score=33.26 Aligned_cols=58 Identities=21% Similarity=0.254 Sum_probs=41.5
Q ss_pred CCeeEecCccccCCCcEEEEecccceec-----cCccc---------hHHHHHHHHHHHHHhcCCCCCCCCCCc
Q 010218 25 PRGIFCSRTLNLRSISAIGYDMDYTLMH-----YNVMA---------WEGRAYDYCMVNLRNMGFPVEGLAFDP 84 (515)
Q Consensus 25 ~~~VF~nr~l~L~~i~~iGFDmDyTLa~-----Y~~~~---------~e~L~y~~~~~~Lv~~gYP~~~l~ydp 84 (515)
..+.||+. |+=..|++|-+|+|-||+- |..+. ... .+....+.|.+.|-|.-..+|..
T Consensus 30 ~~~~~v~~-L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tp-efk~~~~~l~~~~I~v~VVTfSd 101 (219)
T PTZ00445 30 SADKFVDL-LNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTP-DFKILGKRLKNSNIKISVVTFSD 101 (219)
T ss_pred HHHHHHHH-HHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCH-HHHHHHHHHHHCCCeEEEEEccc
Confidence 44567665 7778999999999999999 88774 111 35556677777788866556643
No 226
>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]
Probab=20.70 E-value=42 Score=34.62 Aligned_cols=31 Identities=32% Similarity=0.483 Sum_probs=28.6
Q ss_pred CccccchhccccccCceEEeehHhhHHHHHH
Q 010218 327 DHIYTDVSQSKVHLRWRTALICRELEEEYNA 357 (515)
Q Consensus 327 DHI~~Di~~skk~~gWrT~aIVpELe~Ei~~ 357 (515)
|.+-||..++|+..||..-.-+|||..|+-.
T Consensus 334 d~LqGdasKAk~~LgW~pkv~f~eLVkeMv~ 364 (376)
T KOG1372|consen 334 DTLQGDASKAKKTLGWKPKVTFPELVKEMVA 364 (376)
T ss_pred hhhcCChHHHHHhhCCCCccCHHHHHHHHHH
Confidence 7889999999999999999999999998864
No 227
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=20.63 E-value=6.2e+02 Score=25.91 Aligned_cols=126 Identities=19% Similarity=0.331 Sum_probs=72.5
Q ss_pred hhHHHHHcCcccccccCCCchHHHHHHHHhCc-eEEEEcCCCchhhHHhhcccccccCCCCCCCCCCccEEEEccCCCCC
Q 010218 196 QLKSEIMSKPELFVEPDPELPLALLDQKEAGK-KLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFNMVIVSARKPEF 274 (515)
Q Consensus 196 ~lk~~v~~np~kYi~kd~~l~~~L~~lr~~GK-klFLlTNS~~~yt~~~M~yl~~~~~~~g~dWrd~FDvVIv~A~KP~F 274 (515)
.+|+.+..=| -.|.++++++-+++.|- -+.+|+.|+--|++.+...+ +--++|+=|.++ |.-
T Consensus 75 ~ik~~~r~iP-----~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~---------~~~d~F~~IfTN---Pa~ 137 (256)
T KOG3120|consen 75 EIKQVLRSIP-----IVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAA---------GIHDLFSEIFTN---PAC 137 (256)
T ss_pred HHHHHHhcCC-----CCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHc---------cHHHHHHHHhcC---Ccc
Confidence 4555444433 36888888888888886 79999999999999998865 256788877665 544
Q ss_pred CCCCCCeEEEeCC----CCceecccccCCCccccCCCHHHHHHH-h--CcCCCcEEEEcCccccchhccccccCceEEe
Q 010218 275 FQMSHPLYEVVTG----EGLMRPCFKARTGGLYSGGSAQMIENS-L--NIHGDEILYVGDHIYTDVSQSKVHLRWRTAL 346 (515)
Q Consensus 275 F~~~~pf~~v~~~----~g~~~~~~~l~~g~vY~gGn~~~l~~l-l--~~~g~~VLY~GDHI~~Di~~skk~~gWrT~a 346 (515)
|.++--+. |-+. ...+.|. .+=||.| .+++..- + |.+-.++.|+||-= +|+-...+..+.+-+.
T Consensus 138 ~da~G~L~-v~pyH~~hsC~~CPs-NmCKg~V-----l~~~~~s~~~~gv~yer~iYvGDG~-nD~CP~l~Lr~~D~am 208 (256)
T KOG3120|consen 138 VDASGRLL-VRPYHTQHSCNLCPS-NMCKGLV-----LDELVASQLKDGVRYERLIYVGDGA-NDFCPVLRLRACDVAM 208 (256)
T ss_pred cCCCCcEE-eecCCCCCccCcCch-hhhhhHH-----HHHHHHHHhhcCCceeeEEEEcCCC-CCcCcchhcccCceec
Confidence 44321111 1111 1111110 0112222 1222222 2 34445899999974 7777776655555444
Done!