Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>010223
MSSSPVEPETVVKNRHLGFLIWQSIPSTAIFLLFKLLVLSPRCSILTFLLTLSTFHVSQL
AFSSALSFASSPPQPKRPVPPLRLAFSLLSSWSPDFRRRAVVSFTLMLFVAVAAASGFLS
VASVCWLEGFDGVELFWRVGFRGFVCGLLYAFFYVYKQRWVLEFPIIQRPPFFSFKMSLP
SAIKKALKLSGAAYLFSALPVVFLADQLKSEITFYIGTFAVFLCWELDHHLHQVLHTKRF
MFAPPKGSAAAETNPSEPLLAALEESTPSSLLQYLAYLDLCMVCENNVDTWRRAAFFEET
SETYRRVINVSLKPLKQLATKLGEGMEAGSVDKDISNQLLSPTDMRVDSKYSEELNNFQL
CSWCARTAASLTVHSHKEDRFGVAQLSGSNIDVISTLLSCLLAVEAFMGKKTNLQAPHHL
MGPAGIKWAQLNTGRRDTGMVKKRGGLLHSKAFAMADVLRTSIYCIISAFHDEMISSAKA
GVLEKDWLVSGKPLFGTRELLLQKLRLFLDFQAC

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  010223
        (514 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2197274 - symbol:AT1G73240 "AT1G73240" species...  1286  3.9e-131  1


>TAIR|locus:2197274 [details] [associations]
            symbol:AT1G73240 "AT1G73240" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] EMBL:CP002684 InterPro:IPR019049 Pfam:PF09531
            EMBL:AY087848 IPI:IPI00534658 RefSeq:NP_565060.1 UniGene:At.35016
            PRIDE:Q8LAF4 EnsemblPlants:AT1G73240.1 GeneID:843658
            KEGG:ath:AT1G73240 TAIR:At1g73240 InParanoid:Q8LAF4 OMA:GPASIKW
            PhylomeDB:Q8LAF4 ProtClustDB:CLSN2689180 Genevestigator:Q8LAF4
            Uniprot:Q8LAF4
        Length = 519

 Score = 1286 (457.8 bits), Expect = 3.9e-131, P = 3.9e-131
 Identities = 273/524 (52%), Positives = 339/524 (64%)

Query:     1 MSSSPVEPETVVKNRHLGFLIWQSIPSTAIFLLFKLLVLSPRCSIXXXXXXXXXXHVXXX 60
             M S PV PETVV +R   FLIWQSIPS+AIF  F + + S   SI          H    
Sbjct:     1 MPSPPV-PETVVSHRFAAFLIWQSIPSSAIFFFFNIFLFSTT-SIISFLFTFLVFH-SSQ 57

Query:    61 XXXXXXXXXXXXXXXXXXXXXLRLAFSLLSSWS-PDFRRRAVVSFTLMLFVAVAAASGFL 119
                                  L+ A  L    S P+FRRRA VS  ++LFV   + +GF 
Sbjct:    58 LLFSVSLALLSSPTPDSPLSPLQFAVGLHRHLSDPEFRRRARVSSRIVLFVCATSLAGFC 117

Query:   120 SVASVCWLEGFDGVELFWRVGFRGFVCGLLYAFFYVYKQRWVLEFPIIQRPPFFSFKMSL 179
             S A  C L   D      R+GFRG V GLLYA  +V KQRWVLEFPIIQRPPFFSFK+ L
Sbjct:   118 SSAVFC-LSS-DSFGPIGRIGFRGLVTGLLYAVLFVTKQRWVLEFPIIQRPPFFSFKIGL 175

Query:   180 PSAIKKALKLSGAAYLFSALPVVFLADQ----------LKSEITFYIGTFAVFLCWELDH 229
             PSA+ +ALKLSG  Y+ S + ++FL D           L  ++  Y G+F + L WE+ H
Sbjct:   176 PSALTQALKLSGVLYVLSTIMLLFLLDWSGGLVSVSKFLGEQVLSYAGSFCLILSWEVTH 235

Query:   230 HLHQVLHTKRFMFAPPKGSAAAETNPSEPLLAALEESTPSSLLQYLAYLDLCMVCENNVD 289
             H+H+VLHTKRF FAPPKGSAAAETNPSEPLLAALE S P SL Q LAYLDL MV +NNVD
Sbjct:   236 HIHKVLHTKRFSFAPPKGSAAAETNPSEPLLAALEGSAPGSLEQSLAYLDLYMVSQNNVD 295

Query:   290 TWRRAAFFEETSETYRRVINVSLKPLKQLATKLGEGMEAGSVDKDISNQLLSPTDMRVDS 349
             TWRRAAFFEE++ETY+RVI + L+PL++LA+KL  G++    +K     L  PT+  +D 
Sbjct:   296 TWRRAAFFEESTETYKRVITLCLRPLEELASKLASGLDHTFTEKGYQTPLQPPTESFIDP 355

Query:   350 KYSEELNNFQLCSWCARTAASLTVHSHKEDRFGVAQLSGSNIDVISTLLSCLLAVEAFMG 409
             K+ E L +FQL +WCA+T+ASLT  SHKEDR GVAQLSG N DV+STLLS LLA+E FMG
Sbjct:   356 KFGESLKSFQLYAWCAQTSASLTSISHKEDRLGVAQLSGGNADVVSTLLSLLLAIETFMG 415

Query:   410 KKTNLQAPHHLMGPAGIKWAQLNTGRRDTGMVKKRGGLLHSKAFAMADVLRTSIYCIISA 469
             KKTNLQ+P  LMGPA IKWA  +  R+D   +K+  G +++ A+A  DVLR S+Y I+S 
Sbjct:   416 KKTNLQSPQQLMGPASIKWATSSMVRKDVKPIKRSIGAMYAYAYAATDVLRISVYQILST 475

Query:   470 FHDEMISSAKAGVLEKDWLVSGKPLFGTREXXXXXXXXXXDFQA 513
             F DEM++S +AG+L +DW+ S KP FGT +          +FQA
Sbjct:   476 FRDEMLNSDRAGLLGRDWIGSKKPPFGTNDMLLQKLKLFLEFQA 519


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.325   0.136   0.419    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      514       470   0.00098  118 3  11 22  0.46    33
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  628 (67 KB)
  Total size of DFA:  295 KB (2152 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  40.68u 0.12s 40.80t   Elapsed:  00:00:02
  Total cpu time:  40.68u 0.12s 40.80t   Elapsed:  00:00:02
  Start:  Tue May 21 06:45:05 2013   End:  Tue May 21 06:45:07 2013

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