Query 010225
Match_columns 514
No_of_seqs 230 out of 2731
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 22:36:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010225.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010225hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2qa1_A PGAE, polyketide oxygen 100.0 2.5E-43 8.6E-48 369.6 41.8 370 52-504 8-383 (500)
2 2qa2_A CABE, polyketide oxygen 100.0 2E-43 6.8E-48 370.3 40.7 370 52-504 9-384 (499)
3 3fmw_A Oxygenase; mithramycin, 100.0 9.9E-45 3.4E-49 385.1 31.1 374 53-504 47-429 (570)
4 2x3n_A Probable FAD-dependent 100.0 8.7E-44 3E-48 364.1 30.9 368 53-493 4-383 (399)
5 3rp8_A Flavoprotein monooxygen 100.0 3.2E-43 1.1E-47 360.9 31.7 373 51-498 19-399 (407)
6 1k0i_A P-hydroxybenzoate hydro 100.0 1.4E-40 4.8E-45 339.7 30.3 376 55-503 2-388 (394)
7 1pn0_A Phenol 2-monooxygenase; 100.0 3.1E-40 1.1E-44 356.7 34.1 354 55-472 8-427 (665)
8 3ihg_A RDME; flavoenzyme, anth 100.0 7E-40 2.4E-44 347.6 30.2 344 53-469 3-374 (535)
9 4hb9_A Similarities with proba 100.0 7.3E-40 2.5E-44 335.8 28.2 362 56-483 2-400 (412)
10 2dkh_A 3-hydroxybenzoate hydro 100.0 1.8E-38 6.3E-43 342.4 36.2 352 53-472 30-418 (639)
11 2r0c_A REBC; flavin adenine di 100.0 1.5E-38 5E-43 337.6 31.8 353 53-488 24-410 (549)
12 2vou_A 2,6-dihydroxypyridine h 100.0 2.2E-37 7.7E-42 316.2 33.7 335 53-471 3-371 (397)
13 3alj_A 2-methyl-3-hydroxypyrid 100.0 7.4E-38 2.5E-42 317.8 27.7 323 54-461 10-343 (379)
14 3i3l_A Alkylhalidase CMLS; fla 100.0 2.5E-36 8.5E-41 321.1 33.9 351 53-471 21-386 (591)
15 3c96_A Flavin-containing monoo 100.0 8.6E-37 2.9E-41 313.3 29.0 336 54-462 3-366 (410)
16 3e1t_A Halogenase; flavoprotei 100.0 5.8E-36 2E-40 315.5 34.4 386 53-507 5-404 (512)
17 2xdo_A TETX2 protein; tetracyc 100.0 1.3E-36 4.3E-41 310.8 27.9 354 50-476 21-394 (398)
18 3oz2_A Digeranylgeranylglycero 100.0 1.9E-35 6.3E-40 301.2 34.4 353 54-486 3-365 (397)
19 3nix_A Flavoprotein/dehydrogen 100.0 3.3E-35 1.1E-39 302.5 34.4 337 54-460 4-351 (421)
20 3cgv_A Geranylgeranyl reductas 100.0 4.9E-34 1.7E-38 291.3 34.0 339 55-471 4-353 (397)
21 3atr_A Conserved archaeal prot 100.0 1.8E-34 6.3E-39 299.6 26.5 334 54-470 5-357 (453)
22 3c4a_A Probable tryptophan hyd 100.0 2.1E-34 7E-39 292.6 14.5 337 56-485 1-353 (381)
23 2weu_A Tryptophan 5-halogenase 100.0 1.4E-30 4.6E-35 274.8 36.8 360 55-505 2-440 (511)
24 2pyx_A Tryptophan halogenase; 100.0 1E-30 3.5E-35 276.3 34.0 335 54-470 6-417 (526)
25 2gmh_A Electron transfer flavo 100.0 4.9E-30 1.7E-34 273.4 31.6 347 54-470 34-427 (584)
26 2aqj_A Tryptophan halogenase, 100.0 1.1E-29 3.9E-34 269.1 34.1 327 54-468 4-399 (538)
27 2e4g_A Tryptophan halogenase; 100.0 2.1E-29 7.2E-34 267.5 35.5 360 54-504 24-462 (550)
28 3ihm_A Styrene monooxygenase A 100.0 1.8E-27 6.1E-32 245.1 20.8 369 53-501 20-407 (430)
29 2bry_A NEDD9 interacting prote 99.9 1.1E-22 3.7E-27 212.9 20.9 314 53-456 90-450 (497)
30 1yvv_A Amine oxidase, flavin-c 99.9 5E-20 1.7E-24 183.1 23.7 304 55-433 2-329 (336)
31 1ryi_A Glycine oxidase; flavop 99.6 2.4E-15 8.2E-20 152.0 16.5 191 167-429 160-361 (382)
32 2gag_B Heterotetrameric sarcos 99.6 2.8E-14 9.6E-19 145.2 21.0 116 167-306 170-287 (405)
33 1y56_B Sarcosine oxidase; dehy 99.6 2.2E-13 7.6E-18 137.5 24.4 68 167-256 145-215 (382)
34 2oln_A NIKD protein; flavoprot 99.6 1.6E-13 5.5E-18 139.3 21.2 170 54-255 3-217 (397)
35 2gf3_A MSOX, monomeric sarcosi 99.6 1.2E-13 4.1E-18 139.8 18.7 169 54-254 2-213 (389)
36 3kkj_A Amine oxidase, flavin-c 99.5 8.2E-13 2.8E-17 126.1 23.0 38 54-95 1-38 (336)
37 3nyc_A D-arginine dehydrogenas 99.5 8.7E-14 3E-18 140.3 16.3 69 166-256 149-219 (381)
38 3ps9_A TRNA 5-methylaminomethy 99.5 1.5E-12 5.3E-17 141.3 25.3 63 165-248 411-474 (676)
39 2qcu_A Aerobic glycerol-3-phos 99.5 2E-12 6.8E-17 135.4 23.6 116 166-302 144-268 (501)
40 3pvc_A TRNA 5-methylaminomethy 99.5 2E-12 6.8E-17 140.6 23.5 62 166-248 407-470 (689)
41 3dje_A Fructosyl amine: oxygen 99.5 1.3E-12 4.3E-17 134.5 19.8 62 166-248 156-222 (438)
42 3dme_A Conserved exported prot 99.5 8E-12 2.7E-16 125.1 23.9 71 166-256 145-220 (369)
43 3i6d_A Protoporphyrinogen oxid 99.4 1E-11 3.4E-16 128.8 21.3 73 54-130 4-87 (470)
44 2uzz_A N-methyl-L-tryptophan o 99.4 3.5E-11 1.2E-15 120.8 23.7 61 166-248 144-205 (372)
45 3da1_A Glycerol-3-phosphate de 99.4 3.7E-12 1.3E-16 134.9 16.4 71 166-256 165-242 (561)
46 3v76_A Flavoprotein; structura 99.4 2.8E-12 9.7E-17 130.5 14.5 155 51-247 23-187 (417)
47 2i0z_A NAD(FAD)-utilizing dehy 99.4 4.5E-13 1.5E-17 138.2 7.6 171 52-257 23-212 (447)
48 3nlc_A Uncharacterized protein 99.4 1.1E-12 3.7E-17 137.5 9.9 145 53-248 105-278 (549)
49 3qj4_A Renalase; FAD/NAD(P)-bi 99.3 5.2E-11 1.8E-15 118.2 20.1 36 56-95 2-40 (342)
50 3jsk_A Cypbp37 protein; octame 99.3 8.9E-12 3.1E-16 121.9 13.5 162 54-253 78-257 (344)
51 3c4n_A Uncharacterized protein 99.3 2.8E-12 9.7E-17 130.5 9.8 70 166-257 167-248 (405)
52 1rp0_A ARA6, thiazole biosynth 99.3 3.2E-11 1.1E-15 116.5 16.6 144 54-253 38-197 (284)
53 1c0p_A D-amino acid oxidase; a 99.3 6.8E-11 2.3E-15 118.4 18.7 39 52-94 3-41 (363)
54 3axb_A Putative oxidoreductase 99.3 2.1E-11 7.1E-16 125.8 14.5 85 166-256 176-264 (448)
55 2gqf_A Hypothetical protein HI 99.3 7.9E-12 2.7E-16 126.8 10.6 150 54-247 3-168 (401)
56 3lov_A Protoporphyrinogen oxid 99.3 7.7E-11 2.6E-15 122.5 18.1 72 55-130 4-82 (475)
57 2ywl_A Thioredoxin reductase r 99.3 4.6E-11 1.6E-15 107.0 12.8 117 56-256 2-119 (180)
58 1qo8_A Flavocytochrome C3 fuma 99.2 8.5E-12 2.9E-16 132.5 8.1 155 53-253 119-318 (566)
59 3nks_A Protoporphyrinogen oxid 99.2 1.7E-10 5.8E-15 119.9 17.6 39 55-97 2-42 (477)
60 3ka7_A Oxidoreductase; structu 99.2 7.1E-11 2.4E-15 120.8 13.8 60 171-253 196-257 (425)
61 2cul_A Glucose-inhibited divis 99.2 7.6E-11 2.6E-15 110.3 12.8 130 54-255 2-133 (232)
62 2gjc_A Thiazole biosynthetic e 99.2 1.3E-10 4.3E-15 113.2 14.3 152 53-254 63-246 (326)
63 3ces_A MNMG, tRNA uridine 5-ca 99.2 1.3E-10 4.5E-15 122.7 14.9 158 54-254 27-188 (651)
64 2ivd_A PPO, PPOX, protoporphyr 99.2 4.7E-10 1.6E-14 116.6 18.6 75 52-130 13-92 (478)
65 4a9w_A Monooxygenase; baeyer-v 99.2 5.7E-11 1.9E-15 118.2 11.0 129 55-248 3-133 (357)
66 4dgk_A Phytoene dehydrogenase; 99.2 4.4E-10 1.5E-14 117.6 18.2 64 171-254 221-285 (501)
67 2zbw_A Thioredoxin reductase; 99.2 4E-11 1.4E-15 118.6 9.7 124 53-253 3-127 (335)
68 3ab1_A Ferredoxin--NADP reduct 99.2 5.8E-11 2E-15 118.7 10.5 125 53-253 12-137 (360)
69 3nrn_A Uncharacterized protein 99.2 5.8E-10 2E-14 113.9 18.2 60 171-254 189-249 (421)
70 1y0p_A Fumarate reductase flav 99.2 3E-11 1E-15 128.5 8.8 64 169-252 253-322 (571)
71 2zxi_A TRNA uridine 5-carboxym 99.2 8E-11 2.7E-15 123.9 11.6 157 54-253 26-186 (637)
72 3cp8_A TRNA uridine 5-carboxym 99.2 2E-10 7E-15 121.2 13.8 154 52-251 18-178 (641)
73 3g3e_A D-amino-acid oxidase; F 99.1 5.7E-10 2E-14 111.1 14.6 51 165-248 136-187 (351)
74 2gv8_A Monooxygenase; FMO, FAD 99.1 2.4E-10 8.3E-15 117.8 12.0 165 53-249 4-179 (447)
75 3k7m_X 6-hydroxy-L-nicotine ox 99.1 5.5E-10 1.9E-14 114.4 14.2 36 56-95 2-37 (431)
76 2rgh_A Alpha-glycerophosphate 99.1 4.5E-10 1.5E-14 119.1 11.7 69 167-255 184-259 (571)
77 3gwf_A Cyclohexanone monooxyge 99.1 6.4E-10 2.2E-14 117.0 12.4 139 54-249 7-149 (540)
78 2q0l_A TRXR, thioredoxin reduc 99.1 6.3E-10 2.2E-14 108.6 11.4 114 56-250 2-117 (311)
79 3f8d_A Thioredoxin reductase ( 99.0 1.6E-09 5.3E-14 106.1 13.8 112 54-248 14-126 (323)
80 3fbs_A Oxidoreductase; structu 99.0 6.6E-10 2.3E-14 107.5 10.9 112 55-249 2-114 (297)
81 3itj_A Thioredoxin reductase 1 99.0 4.8E-10 1.7E-14 110.6 9.7 123 51-249 18-144 (338)
82 4at0_A 3-ketosteroid-delta4-5a 99.0 1.8E-09 6.2E-14 113.1 13.9 40 53-96 39-78 (510)
83 1w4x_A Phenylacetone monooxyge 99.0 1.2E-09 4.2E-14 115.2 12.6 142 53-250 14-157 (542)
84 4fk1_A Putative thioredoxin re 99.0 1.2E-09 4.2E-14 106.4 11.6 114 52-247 3-117 (304)
85 1vdc_A NTR, NADPH dependent th 99.0 3.5E-10 1.2E-14 111.6 7.6 119 54-249 7-126 (333)
86 1pj5_A N,N-dimethylglycine oxi 99.0 8.6E-10 2.9E-14 122.4 11.3 69 166-256 146-217 (830)
87 2q7v_A Thioredoxin reductase; 99.0 9.4E-10 3.2E-14 108.2 10.3 115 53-248 6-124 (325)
88 4ap3_A Steroid monooxygenase; 99.0 1.1E-09 3.8E-14 115.4 10.6 139 53-248 19-160 (549)
89 3cty_A Thioredoxin reductase; 99.0 1.3E-09 4.5E-14 106.8 10.5 115 52-249 13-128 (319)
90 1d4d_A Flavocytochrome C fumar 99.0 2.5E-09 8.7E-14 113.4 13.3 65 169-253 253-323 (572)
91 1s3e_A Amine oxidase [flavin-c 99.0 1.6E-07 5.4E-12 98.6 26.7 40 54-97 3-42 (520)
92 3d1c_A Flavin-containing putat 99.0 1.8E-09 6.2E-14 108.0 10.7 139 55-248 4-144 (369)
93 3lzw_A Ferredoxin--NADP reduct 99.0 4.7E-09 1.6E-13 103.2 13.5 117 55-248 7-124 (332)
94 3uox_A Otemo; baeyer-villiger 99.0 1.5E-09 5E-14 114.4 10.1 140 53-249 7-149 (545)
95 1fl2_A Alkyl hydroperoxide red 98.9 2.2E-09 7.4E-14 104.8 10.0 116 55-249 1-117 (310)
96 1kf6_A Fumarate reductase flav 98.9 3.7E-09 1.3E-13 112.6 12.0 65 170-253 133-203 (602)
97 2yg5_A Putrescine oxidase; oxi 98.9 2.3E-07 7.9E-12 95.5 24.8 40 54-97 4-43 (453)
98 2xve_A Flavin-containing monoo 98.9 1.3E-09 4.3E-14 112.8 7.5 148 56-250 3-169 (464)
99 2a87_A TRXR, TR, thioredoxin r 98.9 3E-09 1E-13 105.1 9.9 116 52-249 11-128 (335)
100 1trb_A Thioredoxin reductase; 98.9 2.1E-09 7.2E-14 105.3 8.4 114 54-249 4-118 (320)
101 1sez_A Protoporphyrinogen oxid 98.9 3.3E-08 1.1E-12 103.3 17.8 73 53-129 11-88 (504)
102 3s5w_A L-ornithine 5-monooxyge 98.9 2.9E-09 9.8E-14 110.2 9.5 154 54-249 29-194 (463)
103 4gut_A Lysine-specific histone 98.8 1.6E-07 5.4E-12 102.5 21.3 39 54-96 335-373 (776)
104 1chu_A Protein (L-aspartate ox 98.8 7.3E-09 2.5E-13 109.0 10.2 38 53-95 6-43 (540)
105 2e5v_A L-aspartate oxidase; ar 98.8 1.5E-08 5.2E-13 104.9 12.2 61 170-252 118-181 (472)
106 4a5l_A Thioredoxin reductase; 98.8 1.4E-08 4.7E-13 99.1 11.3 118 54-247 3-121 (314)
107 2wdq_A Succinate dehydrogenase 98.8 1.4E-08 4.6E-13 108.0 11.8 38 54-95 6-43 (588)
108 1hyu_A AHPF, alkyl hydroperoxi 98.8 1.2E-08 4.1E-13 107.0 10.4 117 53-248 210-327 (521)
109 2vvm_A Monoamine oxidase N; FA 98.8 4.4E-08 1.5E-12 102.2 14.7 58 171-248 255-313 (495)
110 2h88_A Succinate dehydrogenase 98.8 6.6E-09 2.3E-13 110.7 7.2 38 54-95 17-54 (621)
111 2bs2_A Quinol-fumarate reducta 98.7 5.2E-08 1.8E-12 104.5 13.4 38 53-94 3-40 (660)
112 4gcm_A TRXR, thioredoxin reduc 98.7 4.2E-08 1.4E-12 95.7 11.3 36 53-92 4-39 (312)
113 2a8x_A Dihydrolipoyl dehydroge 98.7 1.3E-08 4.6E-13 105.2 7.8 142 55-251 3-150 (464)
114 3o0h_A Glutathione reductase; 98.7 2.1E-08 7.3E-13 104.2 8.9 58 171-249 232-290 (484)
115 1v59_A Dihydrolipoamide dehydr 98.7 1.5E-08 5.2E-13 105.2 7.2 37 54-94 4-40 (478)
116 1q1r_A Putidaredoxin reductase 98.7 1.5E-08 5.2E-13 103.7 6.3 37 54-94 3-41 (431)
117 1jnr_A Adenylylsulfate reducta 98.7 8.1E-08 2.8E-12 103.2 11.6 37 54-94 21-61 (643)
118 1dxl_A Dihydrolipoamide dehydr 98.6 5.1E-08 1.7E-12 101.0 8.4 37 54-94 5-41 (470)
119 3l8k_A Dihydrolipoyl dehydroge 98.6 6.5E-08 2.2E-12 100.1 9.0 37 54-94 3-39 (466)
120 1ojt_A Surface protein; redox- 98.6 1.4E-08 4.7E-13 105.6 3.8 38 53-94 4-41 (482)
121 3r9u_A Thioredoxin reductase; 98.6 9.3E-08 3.2E-12 93.1 9.4 110 54-246 3-117 (315)
122 1b37_A Protein (polyamine oxid 98.6 9.8E-07 3.3E-11 91.3 17.3 40 54-97 3-43 (472)
123 4b63_A L-ornithine N5 monooxyg 98.6 2E-07 6.7E-12 97.3 11.6 67 167-246 141-213 (501)
124 3gyx_A Adenylylsulfate reducta 98.6 2.3E-07 7.9E-12 99.4 11.4 39 54-95 21-64 (662)
125 3lxd_A FAD-dependent pyridine 98.5 5E-08 1.7E-12 99.4 5.0 38 53-94 7-46 (415)
126 1mo9_A ORF3; nucleotide bindin 98.5 2.4E-07 8.3E-12 97.2 8.9 59 171-249 255-318 (523)
127 3klj_A NAD(FAD)-dependent dehy 98.5 2.9E-07 9.9E-12 92.6 8.9 37 54-94 8-44 (385)
128 3oc4_A Oxidoreductase, pyridin 98.5 1.5E-07 5.1E-12 96.9 6.8 37 56-94 3-39 (452)
129 3qfa_A Thioredoxin reductase 1 98.5 2.2E-07 7.5E-12 97.4 8.1 39 50-92 27-65 (519)
130 3p1w_A Rabgdi protein; GDI RAB 98.5 1.3E-06 4.6E-11 89.4 13.5 57 171-246 256-313 (475)
131 1zmd_A Dihydrolipoyl dehydroge 98.5 3.6E-07 1.2E-11 94.7 9.5 38 53-94 4-41 (474)
132 1ebd_A E3BD, dihydrolipoamide 98.5 2.8E-07 9.6E-12 95.0 8.6 33 55-91 3-35 (455)
133 2gqw_A Ferredoxin reductase; f 98.4 1.3E-07 4.6E-12 95.9 5.7 37 54-94 6-44 (408)
134 3kd9_A Coenzyme A disulfide re 98.4 4.3E-07 1.5E-11 93.4 9.2 38 55-94 3-40 (449)
135 3urh_A Dihydrolipoyl dehydroge 98.4 4.6E-07 1.6E-11 94.3 9.0 38 53-94 23-60 (491)
136 3sx6_A Sulfide-quinone reducta 98.4 4.4E-07 1.5E-11 93.0 8.7 34 56-93 5-41 (437)
137 3iwa_A FAD-dependent pyridine 98.4 4.2E-07 1.4E-11 94.1 8.6 38 55-94 3-40 (472)
138 2qae_A Lipoamide, dihydrolipoy 98.4 5.7E-07 2E-11 93.0 9.4 36 55-94 2-37 (468)
139 3fpz_A Thiazole biosynthetic e 98.4 4.1E-07 1.4E-11 89.3 7.8 69 53-126 63-131 (326)
140 2yqu_A 2-oxoglutarate dehydrog 98.4 4E-07 1.4E-11 93.8 7.5 36 55-94 1-36 (455)
141 2bc0_A NADH oxidase; flavoprot 98.4 5.5E-07 1.9E-11 93.6 8.6 37 54-94 34-73 (490)
142 3h28_A Sulfide-quinone reducta 98.4 6.4E-07 2.2E-11 91.6 8.6 38 55-94 2-39 (430)
143 2v3a_A Rubredoxin reductase; a 98.4 1.2E-06 4.1E-11 88.1 10.5 100 55-249 145-245 (384)
144 1xhc_A NADH oxidase /nitrite r 98.3 7.7E-07 2.6E-11 88.9 8.4 35 55-94 8-42 (367)
145 3fg2_P Putative rubredoxin red 98.3 2.2E-07 7.5E-12 94.2 4.4 35 56-94 2-38 (404)
146 3cgb_A Pyridine nucleotide-dis 98.3 1.4E-07 4.8E-12 97.9 2.9 38 55-94 36-73 (480)
147 2yqu_A 2-oxoglutarate dehydrog 98.3 2.8E-06 9.5E-11 87.5 12.4 99 55-249 167-266 (455)
148 3ef6_A Toluene 1,2-dioxygenase 98.3 8E-07 2.7E-11 90.2 8.2 35 56-94 3-39 (410)
149 3h8l_A NADH oxidase; membrane 98.3 1.7E-07 5.9E-12 95.1 3.1 35 56-94 2-39 (409)
150 4dna_A Probable glutathione re 98.3 1.1E-06 3.7E-11 90.8 9.1 34 54-91 4-37 (463)
151 3lad_A Dihydrolipoamide dehydr 98.3 6.8E-07 2.3E-11 92.6 7.1 37 54-94 2-38 (476)
152 2cdu_A NADPH oxidase; flavoenz 98.3 1.7E-07 5.7E-12 96.6 2.0 37 56-94 1-37 (452)
153 3dk9_A Grase, GR, glutathione 98.3 2.3E-07 7.9E-12 96.3 3.0 37 52-92 17-53 (478)
154 3dgz_A Thioredoxin reductase 2 98.3 6.9E-07 2.4E-11 92.9 6.5 36 53-92 4-39 (488)
155 1zk7_A HGII, reductase, mercur 98.3 1E-06 3.4E-11 91.1 7.7 35 54-92 3-37 (467)
156 2eq6_A Pyruvate dehydrogenase 98.3 3.1E-06 1.1E-10 87.3 11.2 100 55-250 169-274 (464)
157 3ics_A Coenzyme A-disulfide re 98.3 1.1E-06 3.9E-11 93.5 8.1 40 53-94 34-73 (588)
158 3hyw_A Sulfide-quinone reducta 98.3 6.3E-07 2.2E-11 91.6 5.6 36 56-93 3-38 (430)
159 3k30_A Histamine dehydrogenase 98.3 1.4E-06 4.7E-11 94.6 8.3 40 52-95 388-427 (690)
160 1nhp_A NADH peroxidase; oxidor 98.3 3.1E-07 1.1E-11 94.4 3.1 37 56-94 1-37 (447)
161 4gde_A UDP-galactopyranose mut 98.2 3.8E-07 1.3E-11 95.3 3.7 41 54-97 9-49 (513)
162 1xdi_A RV3303C-LPDA; reductase 98.2 1.8E-06 6.2E-11 90.0 8.7 36 55-92 2-38 (499)
163 2r9z_A Glutathione amide reduc 98.2 3.1E-06 1.1E-10 87.3 10.2 35 54-92 3-37 (463)
164 1ges_A Glutathione reductase; 98.2 3E-06 1E-10 87.1 9.8 100 55-249 167-267 (450)
165 4b1b_A TRXR, thioredoxin reduc 98.2 1.9E-05 6.5E-10 82.6 15.8 58 171-249 263-321 (542)
166 2eq6_A Pyruvate dehydrogenase 98.2 1.8E-06 6.1E-11 89.2 7.9 34 55-92 6-39 (464)
167 3dgh_A TRXR-1, thioredoxin red 98.2 2.2E-06 7.5E-11 89.0 8.4 35 53-91 7-41 (483)
168 2hqm_A GR, grase, glutathione 98.2 1.3E-06 4.4E-11 90.6 6.6 35 54-92 10-44 (479)
169 3g5s_A Methylenetetrahydrofola 98.2 8.2E-06 2.8E-10 80.3 11.7 114 56-198 2-124 (443)
170 1ges_A Glutathione reductase; 98.2 4.8E-06 1.6E-10 85.5 10.7 35 54-92 3-37 (450)
171 2v3a_A Rubredoxin reductase; a 98.2 9.6E-07 3.3E-11 88.8 4.7 35 54-92 3-39 (384)
172 1fec_A Trypanothione reductase 98.2 5.7E-06 1.9E-10 86.0 10.4 33 54-90 2-35 (490)
173 1m6i_A Programmed cell death p 98.1 3.3E-07 1.1E-11 95.4 0.5 40 53-94 9-48 (493)
174 3vrd_B FCCB subunit, flavocyto 98.1 5.8E-06 2E-10 83.5 9.5 36 56-93 3-38 (401)
175 1nhp_A NADH peroxidase; oxidor 98.1 1.2E-05 4.2E-10 82.4 12.1 100 54-249 148-248 (447)
176 2r9z_A Glutathione amide reduc 98.1 7.4E-06 2.5E-10 84.4 10.4 99 55-249 166-266 (463)
177 2e1m_A L-glutamate oxidase; L- 98.1 2.6E-06 9E-11 84.8 6.6 40 53-96 42-82 (376)
178 1y56_A Hypothetical protein PH 98.1 1.8E-06 6.2E-11 89.8 5.1 36 54-94 107-142 (493)
179 2bcg_G Secretory pathway GDP d 98.1 2.3E-06 7.8E-11 88.0 5.4 42 52-97 8-49 (453)
180 3ntd_A FAD-dependent pyridine 98.1 4.2E-06 1.4E-10 88.6 7.5 37 56-94 2-38 (565)
181 2b9w_A Putative aminooxidase; 98.1 3.1E-06 1.1E-10 86.1 5.7 41 53-97 4-45 (424)
182 2wpf_A Trypanothione reductase 98.0 7.2E-06 2.5E-10 85.3 8.0 33 54-90 6-39 (495)
183 1rsg_A FMS1 protein; FAD bindi 98.0 2.4E-06 8.3E-11 89.4 4.1 42 53-98 6-48 (516)
184 3ef6_A Toluene 1,2-dioxygenase 98.0 2.9E-05 9.9E-10 78.7 11.5 108 55-257 143-253 (410)
185 2jae_A L-amino acid oxidase; o 98.0 5.7E-06 1.9E-10 85.9 6.2 42 52-97 8-49 (489)
186 3lxd_A FAD-dependent pyridine 98.0 3.2E-05 1.1E-09 78.5 10.9 101 55-249 152-253 (415)
187 1ebd_A E3BD, dihydrolipoamide 97.9 2.1E-05 7.3E-10 80.8 9.6 99 55-249 170-272 (455)
188 3hdq_A UDP-galactopyranose mut 97.9 6.2E-06 2.1E-10 82.7 5.2 40 52-95 26-65 (397)
189 3fg2_P Putative rubredoxin red 97.9 6.5E-05 2.2E-09 75.9 12.7 109 55-257 142-253 (404)
190 2hqm_A GR, grase, glutathione 97.9 3.3E-05 1.1E-09 79.9 10.6 101 55-249 185-287 (479)
191 1v0j_A UDP-galactopyranose mut 97.9 5.7E-06 2E-10 83.5 4.7 41 53-96 5-45 (399)
192 1v59_A Dihydrolipoamide dehydr 97.9 4.6E-05 1.6E-09 78.8 11.5 102 55-250 183-290 (478)
193 2gag_A Heterotetrameric sarcos 97.9 2.8E-05 9.6E-10 87.3 10.3 36 55-94 128-163 (965)
194 2qae_A Lipoamide, dihydrolipoy 97.9 4.9E-05 1.7E-09 78.3 11.4 99 55-249 174-278 (468)
195 1xdi_A RV3303C-LPDA; reductase 97.9 6.3E-05 2.2E-09 78.2 11.8 99 55-249 182-281 (499)
196 1ojt_A Surface protein; redox- 97.9 2E-05 7E-10 81.6 8.0 99 55-249 185-288 (482)
197 1zmd_A Dihydrolipoyl dehydroge 97.9 8.3E-05 2.8E-09 76.8 12.3 100 55-249 178-284 (474)
198 1onf_A GR, grase, glutathione 97.9 6.6E-05 2.3E-09 78.1 11.7 100 55-249 176-277 (500)
199 4g6h_A Rotenone-insensitive NA 97.8 6.9E-05 2.4E-09 77.9 11.5 37 52-92 39-75 (502)
200 1fec_A Trypanothione reductase 97.8 6.3E-05 2.2E-09 78.0 11.1 103 55-249 187-290 (490)
201 3ic9_A Dihydrolipoamide dehydr 97.8 7.2E-06 2.5E-10 85.2 3.3 35 54-92 7-41 (492)
202 4dsg_A UDP-galactopyranose mut 97.8 1.3E-05 4.3E-10 83.2 5.0 41 52-96 6-47 (484)
203 2cdu_A NADPH oxidase; flavoenz 97.8 0.00018 6E-09 73.8 13.5 99 55-249 149-249 (452)
204 1i8t_A UDP-galactopyranose mut 97.8 1.3E-05 4.5E-10 79.9 4.8 36 56-95 2-37 (367)
205 1dxl_A Dihydrolipoamide dehydr 97.8 4E-05 1.4E-09 79.1 8.5 99 55-249 177-281 (470)
206 3iwa_A FAD-dependent pyridine 97.8 0.00011 3.6E-09 75.9 11.7 109 55-257 159-270 (472)
207 2gqw_A Ferredoxin reductase; f 97.8 9.8E-05 3.3E-09 74.7 11.1 103 55-256 145-250 (408)
208 1lvl_A Dihydrolipoamide dehydr 97.8 4E-05 1.4E-09 78.8 8.3 97 55-249 171-270 (458)
209 1zk7_A HGII, reductase, mercur 97.8 0.00012 4.3E-09 75.3 12.0 97 55-249 176-273 (467)
210 2bi7_A UDP-galactopyranose mut 97.8 1.9E-05 6.4E-10 79.3 5.6 37 55-95 3-39 (384)
211 3cgb_A Pyridine nucleotide-dis 97.8 0.00012 4E-09 75.8 11.6 99 54-249 185-284 (480)
212 3oc4_A Oxidoreductase, pyridin 97.8 0.00018 6.3E-09 73.7 13.0 99 55-249 147-246 (452)
213 1trb_A Thioredoxin reductase; 97.8 0.00025 8.5E-09 68.8 13.3 36 55-94 145-180 (320)
214 1xhc_A NADH oxidase /nitrite r 97.8 8.4E-05 2.9E-09 74.0 10.0 92 56-249 144-236 (367)
215 1q1r_A Putidaredoxin reductase 97.8 0.00011 3.9E-09 74.8 11.0 110 55-256 149-261 (431)
216 2bc0_A NADH oxidase; flavoprot 97.7 0.00021 7.3E-09 74.0 13.3 100 54-249 193-293 (490)
217 1d5t_A Guanine nucleotide diss 97.7 2.4E-05 8.2E-10 79.9 5.7 42 52-97 3-44 (433)
218 3ic9_A Dihydrolipoamide dehydr 97.7 0.00014 4.8E-09 75.4 11.6 98 55-249 174-276 (492)
219 4eqs_A Coenzyme A disulfide re 97.7 4.1E-05 1.4E-09 78.2 7.2 36 57-94 2-37 (437)
220 3ntd_A FAD-dependent pyridine 97.7 0.0002 6.9E-09 75.6 12.8 118 55-249 151-269 (565)
221 3urh_A Dihydrolipoyl dehydroge 97.7 0.00015 5E-09 75.3 11.3 99 55-249 198-302 (491)
222 3pl8_A Pyranose 2-oxidase; sub 97.7 2E-05 7E-10 84.0 4.9 39 53-95 44-82 (623)
223 2iid_A L-amino-acid oxidase; f 97.7 2.2E-05 7.7E-10 81.6 5.0 40 53-96 31-70 (498)
224 2a8x_A Dihydrolipoyl dehydroge 97.7 0.0001 3.5E-09 75.9 9.7 99 55-249 171-273 (464)
225 2wpf_A Trypanothione reductase 97.7 0.00012 4E-09 76.0 10.2 103 55-249 191-294 (495)
226 1m6i_A Programmed cell death p 97.7 0.00024 8.3E-09 73.6 12.6 111 55-256 180-293 (493)
227 2vdc_G Glutamate synthase [NAD 97.7 2.6E-05 8.9E-10 80.0 5.0 38 53-94 120-157 (456)
228 3lad_A Dihydrolipoamide dehydr 97.7 0.00018 6E-09 74.3 10.9 99 55-249 180-282 (476)
229 1onf_A GR, grase, glutathione 97.6 2.6E-05 8.9E-10 81.2 4.4 34 55-92 2-35 (500)
230 3t37_A Probable dehydrogenase; 97.6 3.7E-05 1.3E-09 80.5 4.8 38 54-94 16-53 (526)
231 2zbw_A Thioredoxin reductase; 97.6 0.00041 1.4E-08 67.7 12.0 36 55-94 152-187 (335)
232 1kdg_A CDH, cellobiose dehydro 97.6 4.2E-05 1.4E-09 80.5 4.5 37 53-93 5-41 (546)
233 3dgh_A TRXR-1, thioredoxin red 97.5 0.0004 1.4E-08 71.8 11.6 99 55-249 187-291 (483)
234 4dna_A Probable glutathione re 97.5 0.00028 9.6E-09 72.5 10.1 99 55-249 170-270 (463)
235 1lvl_A Dihydrolipoamide dehydr 97.5 4.3E-05 1.5E-09 78.6 3.5 34 54-91 4-37 (458)
236 3itj_A Thioredoxin reductase 1 97.5 0.0004 1.4E-08 67.7 10.4 36 55-94 173-208 (338)
237 3ics_A Coenzyme A-disulfide re 97.5 0.00033 1.1E-08 74.4 10.2 97 55-249 187-284 (588)
238 3d1c_A Flavin-containing putat 97.5 0.00071 2.4E-08 66.9 11.8 107 55-249 166-274 (369)
239 1o94_A Tmadh, trimethylamine d 97.5 9.6E-05 3.3E-09 80.5 5.8 38 53-94 387-424 (729)
240 4eqs_A Coenzyme A disulfide re 97.4 0.00031 1E-08 71.7 9.1 93 55-247 147-240 (437)
241 3qvp_A Glucose oxidase; oxidor 97.4 8.8E-05 3E-09 78.2 4.9 37 53-92 17-53 (583)
242 2z3y_A Lysine-specific histone 97.4 0.00011 3.6E-09 79.2 5.6 40 53-96 105-144 (662)
243 3s5w_A L-ornithine 5-monooxyge 97.4 0.00028 9.7E-09 72.4 8.6 145 54-246 226-376 (463)
244 1ps9_A 2,4-dienoyl-COA reducta 97.4 0.00015 5.2E-09 78.2 6.7 38 53-94 371-408 (671)
245 3q9t_A Choline dehydrogenase a 97.4 0.0001 3.4E-09 77.8 5.1 38 53-93 4-41 (577)
246 3dk9_A Grase, GR, glutathione 97.4 0.00052 1.8E-08 70.8 10.2 100 55-249 187-295 (478)
247 3ab1_A Ferredoxin--NADP reduct 97.4 0.00044 1.5E-08 68.4 9.3 35 55-93 163-197 (360)
248 2q0l_A TRXR, thioredoxin reduc 97.4 0.0011 3.9E-08 63.8 12.1 36 55-94 143-178 (311)
249 2x8g_A Thioredoxin glutathione 97.4 8.4E-05 2.9E-09 79.1 4.3 35 53-91 105-139 (598)
250 2q7v_A Thioredoxin reductase; 97.4 0.0013 4.5E-08 63.8 12.5 36 55-94 152-187 (325)
251 2xag_A Lysine-specific histone 97.4 0.00014 4.7E-09 80.0 5.9 40 53-96 276-315 (852)
252 3dgz_A Thioredoxin reductase 2 97.3 0.00079 2.7E-08 69.6 10.2 99 55-249 185-289 (488)
253 3kd9_A Coenzyme A disulfide re 97.3 0.0012 4.1E-08 67.5 11.4 105 55-256 148-255 (449)
254 1ju2_A HydroxynitrIle lyase; f 97.3 0.0001 3.5E-09 77.2 3.2 37 53-94 24-60 (536)
255 3cty_A Thioredoxin reductase; 97.3 0.0014 4.8E-08 63.4 11.2 35 55-93 155-189 (319)
256 1fl2_A Alkyl hydroperoxide red 97.2 0.0015 5E-08 63.0 10.7 35 55-93 144-178 (310)
257 1cjc_A Protein (adrenodoxin re 97.2 0.00019 6.4E-09 73.7 4.4 37 54-94 5-43 (460)
258 3fim_B ARYL-alcohol oxidase; A 97.2 0.00015 5E-09 76.3 3.4 37 55-94 2-38 (566)
259 1gte_A Dihydropyrimidine dehyd 97.2 0.00023 7.8E-09 80.4 4.6 37 54-94 186-223 (1025)
260 1lqt_A FPRA; NADP+ derivative, 97.1 0.0002 6.8E-09 73.4 3.6 41 54-94 2-45 (456)
261 1vdc_A NTR, NADPH dependent th 97.1 0.0024 8.1E-08 62.1 11.0 36 55-94 159-194 (333)
262 3ayj_A Pro-enzyme of L-phenyla 97.1 0.0002 7E-09 76.6 3.4 36 55-94 56-100 (721)
263 3r9u_A Thioredoxin reductase; 97.1 0.0024 8.2E-08 61.4 10.8 36 55-94 147-182 (315)
264 1gpe_A Protein (glucose oxidas 97.1 0.00037 1.3E-08 73.8 5.3 39 53-94 22-60 (587)
265 3l8k_A Dihydrolipoyl dehydroge 97.1 0.0026 8.9E-08 65.3 11.6 97 55-249 172-274 (466)
266 3f8d_A Thioredoxin reductase ( 97.1 0.0019 6.6E-08 62.3 10.1 36 55-94 154-189 (323)
267 1n4w_A CHOD, cholesterol oxida 97.0 0.00032 1.1E-08 72.9 4.0 37 54-94 4-40 (504)
268 2jbv_A Choline oxidase; alcoho 97.0 0.0005 1.7E-08 72.2 5.3 38 54-94 12-49 (546)
269 1coy_A Cholesterol oxidase; ox 97.0 0.00042 1.5E-08 72.0 4.7 37 53-93 9-45 (507)
270 3gwf_A Cyclohexanone monooxyge 97.0 0.004 1.4E-07 65.1 12.1 36 54-93 177-212 (540)
271 4g6h_A Rotenone-insensitive NA 97.0 0.0011 3.9E-08 68.7 7.8 54 172-246 273-331 (502)
272 2a87_A TRXR, TR, thioredoxin r 97.0 0.0026 8.9E-08 62.0 9.8 35 55-93 155-189 (335)
273 3uox_A Otemo; baeyer-villiger 97.0 0.0038 1.3E-07 65.4 11.4 36 54-93 184-219 (545)
274 3lzw_A Ferredoxin--NADP reduct 96.9 0.0019 6.7E-08 62.6 8.6 36 55-94 154-189 (332)
275 3fbs_A Oxidoreductase; structu 96.9 0.0022 7.4E-08 61.1 8.7 33 55-92 141-173 (297)
276 3qfa_A Thioredoxin reductase 1 96.9 0.0037 1.3E-07 65.1 10.4 33 55-91 210-242 (519)
277 1vg0_A RAB proteins geranylger 96.6 0.0018 6.1E-08 68.5 5.5 40 52-95 5-44 (650)
278 2x8g_A Thioredoxin glutathione 96.5 0.012 4.3E-07 62.3 11.3 32 56-91 287-318 (598)
279 1hyu_A AHPF, alkyl hydroperoxi 96.5 0.011 3.8E-07 61.5 10.5 35 55-93 355-389 (521)
280 1cjc_A Protein (adrenodoxin re 96.2 0.013 4.3E-07 60.0 9.3 36 55-94 145-201 (460)
281 4ap3_A Steroid monooxygenase; 96.0 0.025 8.7E-07 59.1 10.6 36 54-93 190-225 (549)
282 2xve_A Flavin-containing monoo 95.9 0.019 6.4E-07 58.8 8.6 35 55-93 197-231 (464)
283 2gv8_A Monooxygenase; FMO, FAD 95.9 0.013 4.5E-07 59.6 7.3 34 55-92 212-246 (447)
284 1lqt_A FPRA; NADP+ derivative, 95.8 0.017 5.7E-07 59.0 7.8 40 55-94 147-203 (456)
285 3fwz_A Inner membrane protein 95.8 0.01 3.6E-07 49.8 5.2 36 54-93 6-41 (140)
286 1ps9_A 2,4-dienoyl-COA reducta 95.7 0.026 8.9E-07 60.7 9.4 48 175-246 577-627 (671)
287 1o94_A Tmadh, trimethylamine d 95.6 0.03 1E-06 60.8 9.3 35 55-94 528-564 (729)
288 2g1u_A Hypothetical protein TM 95.5 0.012 4.2E-07 50.2 4.8 37 54-94 18-54 (155)
289 2gag_A Heterotetrameric sarcos 95.3 0.024 8.1E-07 63.6 7.2 35 56-94 285-319 (965)
290 1lss_A TRK system potassium up 95.3 0.016 5.6E-07 48.1 4.6 33 56-92 5-37 (140)
291 3ic5_A Putative saccharopine d 95.1 0.022 7.5E-07 45.7 4.8 34 55-92 5-39 (118)
292 4gcm_A TRXR, thioredoxin reduc 95.1 0.02 6.9E-07 54.9 5.3 35 56-94 146-180 (312)
293 3llv_A Exopolyphosphatase-rela 95.1 0.018 6.3E-07 48.1 4.4 33 56-92 7-39 (141)
294 1id1_A Putative potassium chan 95.0 0.022 7.7E-07 48.4 4.8 34 55-92 3-36 (153)
295 1f0y_A HCDH, L-3-hydroxyacyl-C 95.0 0.022 7.5E-07 54.6 5.2 34 56-93 16-49 (302)
296 3klj_A NAD(FAD)-dependent dehy 95.0 0.014 4.8E-07 58.2 3.8 35 56-94 147-181 (385)
297 1pzg_A LDH, lactate dehydrogen 94.7 0.028 9.5E-07 54.7 5.0 39 51-93 5-44 (331)
298 3ado_A Lambda-crystallin; L-gu 94.5 0.021 7.2E-07 55.0 3.7 35 55-93 6-40 (319)
299 3k96_A Glycerol-3-phosphate de 94.5 0.033 1.1E-06 54.8 5.1 38 51-92 25-62 (356)
300 4a9w_A Monooxygenase; baeyer-v 94.5 0.058 2E-06 52.4 6.9 33 55-92 163-195 (357)
301 3h8l_A NADH oxidase; membrane 94.4 0.17 6E-06 50.4 10.3 48 174-246 221-269 (409)
302 4a5l_A Thioredoxin reductase; 94.3 0.046 1.6E-06 52.3 5.6 36 55-94 152-187 (314)
303 3i83_A 2-dehydropantoate 2-red 93.9 0.046 1.6E-06 52.9 4.6 33 56-92 3-35 (320)
304 2hmt_A YUAA protein; RCK, KTN, 93.8 0.043 1.5E-06 45.6 3.8 33 56-92 7-39 (144)
305 4e12_A Diketoreductase; oxidor 93.7 0.063 2.1E-06 50.9 5.1 34 56-93 5-38 (283)
306 4g65_A TRK system potassium up 93.5 0.06 2E-06 54.9 4.9 35 55-93 3-37 (461)
307 1w4x_A Phenylacetone monooxyge 93.5 0.031 1.1E-06 58.4 2.8 36 55-94 186-221 (542)
308 1gte_A Dihydropyrimidine dehyd 93.4 0.21 7.2E-06 56.3 9.6 33 56-92 333-366 (1025)
309 2dpo_A L-gulonate 3-dehydrogen 93.4 0.057 1.9E-06 52.1 4.3 35 55-93 6-40 (319)
310 3l4b_C TRKA K+ channel protien 93.4 0.052 1.8E-06 49.2 3.8 33 57-93 2-34 (218)
311 3qha_A Putative oxidoreductase 93.3 0.062 2.1E-06 51.3 4.4 37 54-94 14-50 (296)
312 3c85_A Putative glutathione-re 93.1 0.07 2.4E-06 46.8 4.1 34 55-92 39-73 (183)
313 3hn2_A 2-dehydropantoate 2-red 93.1 0.055 1.9E-06 52.1 3.7 33 56-92 3-35 (312)
314 2ewd_A Lactate dehydrogenase,; 92.9 0.085 2.9E-06 50.9 4.7 35 55-93 4-39 (317)
315 4dio_A NAD(P) transhydrogenase 92.8 0.098 3.4E-06 51.9 5.1 36 54-93 189-224 (405)
316 2hjr_A Malate dehydrogenase; m 92.8 0.1 3.5E-06 50.6 5.1 35 55-93 14-49 (328)
317 3dfz_A SIRC, precorrin-2 dehyd 92.7 0.11 3.6E-06 47.3 4.7 35 54-92 30-64 (223)
318 3sx6_A Sulfide-quinone reducta 92.6 0.15 5.3E-06 51.4 6.4 48 175-245 212-267 (437)
319 2raf_A Putative dinucleotide-b 92.6 0.11 3.8E-06 46.7 4.8 35 55-93 19-53 (209)
320 1ks9_A KPA reductase;, 2-dehyd 92.6 0.1 3.5E-06 49.3 4.8 33 57-93 2-34 (291)
321 1lld_A L-lactate dehydrogenase 92.4 0.1 3.6E-06 50.2 4.7 33 56-92 8-42 (319)
322 3tl2_A Malate dehydrogenase; c 92.4 0.12 4.1E-06 49.7 5.0 35 54-92 7-42 (315)
323 1kyq_A Met8P, siroheme biosynt 92.3 0.071 2.4E-06 50.0 3.1 35 54-92 12-46 (274)
324 1bg6_A N-(1-D-carboxylethyl)-L 92.3 0.11 3.8E-06 50.8 4.7 33 56-92 5-37 (359)
325 3h28_A Sulfide-quinone reducta 92.3 0.19 6.4E-06 50.7 6.5 50 174-246 203-255 (430)
326 3ego_A Probable 2-dehydropanto 92.2 0.13 4.4E-06 49.3 5.0 43 440-482 247-289 (307)
327 3ghy_A Ketopantoate reductase 92.2 0.1 3.6E-06 50.7 4.3 32 56-91 4-35 (335)
328 1evy_A Glycerol-3-phosphate de 92.2 0.13 4.6E-06 50.5 5.2 32 57-92 17-48 (366)
329 2ew2_A 2-dehydropantoate 2-red 92.1 0.12 4E-06 49.5 4.6 33 56-92 4-36 (316)
330 2y0c_A BCEC, UDP-glucose dehyd 92.1 0.12 4E-06 53.0 4.7 35 54-92 7-41 (478)
331 3gg2_A Sugar dehydrogenase, UD 92.1 0.12 4E-06 52.5 4.7 33 56-92 3-35 (450)
332 1t2d_A LDH-P, L-lactate dehydr 92.1 0.15 5.1E-06 49.3 5.2 35 55-93 4-39 (322)
333 3g17_A Similar to 2-dehydropan 91.9 0.073 2.5E-06 50.7 2.8 33 56-92 3-35 (294)
334 3oj0_A Glutr, glutamyl-tRNA re 91.9 0.1 3.4E-06 43.8 3.4 34 55-92 21-54 (144)
335 4fk1_A Putative thioredoxin re 91.8 1 3.4E-05 42.7 10.8 33 56-92 147-180 (304)
336 3k6j_A Protein F01G10.3, confi 91.8 0.18 6.1E-06 51.0 5.6 33 56-92 55-87 (460)
337 3p2y_A Alanine dehydrogenase/p 91.7 0.11 3.9E-06 51.0 3.9 36 54-93 183-218 (381)
338 3doj_A AT3G25530, dehydrogenas 91.6 0.16 5.6E-06 48.7 5.0 35 55-93 21-55 (310)
339 1z82_A Glycerol-3-phosphate de 91.6 0.15 5E-06 49.6 4.7 36 53-92 12-47 (335)
340 1zej_A HBD-9, 3-hydroxyacyl-CO 91.6 0.17 5.9E-06 48.0 5.0 34 54-92 11-44 (293)
341 2qyt_A 2-dehydropantoate 2-red 91.5 0.11 3.9E-06 49.8 3.7 32 55-90 8-45 (317)
342 1zcj_A Peroxisomal bifunctiona 91.3 0.21 7.1E-06 50.9 5.6 33 56-92 38-70 (463)
343 2v6b_A L-LDH, L-lactate dehydr 91.2 0.17 5.9E-06 48.4 4.6 32 57-92 2-35 (304)
344 2uyy_A N-PAC protein; long-cha 91.1 0.19 6.6E-06 48.2 4.9 35 55-93 30-64 (316)
345 4a7p_A UDP-glucose dehydrogena 91.1 0.19 6.4E-06 50.8 4.9 37 54-94 7-43 (446)
346 3lk7_A UDP-N-acetylmuramoylala 91.1 0.18 6E-06 51.3 4.7 34 55-92 9-42 (451)
347 2x5o_A UDP-N-acetylmuramoylala 91.0 0.15 5E-06 51.7 4.1 35 56-94 6-40 (439)
348 3g0o_A 3-hydroxyisobutyrate de 91.0 0.2 6.7E-06 47.9 4.7 34 55-92 7-40 (303)
349 4b1b_A TRXR, thioredoxin reduc 90.9 0.15 5E-06 53.1 4.1 36 55-94 223-258 (542)
350 1guz_A Malate dehydrogenase; o 90.8 0.22 7.4E-06 47.8 4.9 35 57-93 2-36 (310)
351 1y6j_A L-lactate dehydrogenase 90.7 0.21 7.3E-06 48.1 4.8 36 54-93 6-43 (318)
352 4e21_A 6-phosphogluconate dehy 90.7 0.21 7.1E-06 49.0 4.7 36 53-92 20-55 (358)
353 3dtt_A NADP oxidoreductase; st 90.7 0.22 7.5E-06 46.0 4.7 36 54-93 18-53 (245)
354 3hwr_A 2-dehydropantoate 2-red 90.7 0.19 6.6E-06 48.3 4.5 33 55-92 19-51 (318)
355 3gvi_A Malate dehydrogenase; N 90.6 0.25 8.5E-06 47.7 5.1 35 55-93 7-42 (324)
356 4b63_A L-ornithine N5 monooxyg 90.5 0.85 2.9E-05 46.9 9.4 39 54-94 245-283 (501)
357 1x13_A NAD(P) transhydrogenase 90.5 0.22 7.4E-06 49.7 4.7 35 55-93 172-206 (401)
358 1ur5_A Malate dehydrogenase; o 90.5 0.25 8.5E-06 47.4 4.9 33 56-92 3-36 (309)
359 3pef_A 6-phosphogluconate dehy 90.5 0.22 7.4E-06 47.2 4.5 34 56-93 2-35 (287)
360 3pqe_A L-LDH, L-lactate dehydr 90.4 0.21 7.3E-06 48.2 4.4 35 54-92 4-40 (326)
361 1jw9_B Molybdopterin biosynthe 90.4 0.18 6.2E-06 46.7 3.8 34 55-92 31-65 (249)
362 3l9w_A Glutathione-regulated p 90.4 0.2 6.9E-06 50.1 4.4 35 55-93 4-38 (413)
363 3qsg_A NAD-binding phosphogluc 90.4 0.18 6.1E-06 48.5 3.8 35 54-92 23-58 (312)
364 4ezb_A Uncharacterized conserv 90.1 0.24 8.4E-06 47.6 4.6 35 55-93 24-59 (317)
365 1l7d_A Nicotinamide nucleotide 90.1 0.26 9.1E-06 48.8 5.0 36 54-93 171-206 (384)
366 3ggo_A Prephenate dehydrogenas 90.1 0.3 1E-05 46.9 5.2 34 55-92 33-68 (314)
367 3mog_A Probable 3-hydroxybutyr 90.0 0.24 8E-06 50.7 4.6 34 56-93 6-39 (483)
368 3g79_A NDP-N-acetyl-D-galactos 90.0 0.24 8.1E-06 50.5 4.6 36 55-93 18-54 (478)
369 3l6d_A Putative oxidoreductase 90.0 0.32 1.1E-05 46.5 5.3 35 54-92 8-42 (306)
370 3dfu_A Uncharacterized protein 89.9 0.089 3E-06 48.0 1.2 33 54-90 5-37 (232)
371 3p7m_A Malate dehydrogenase; p 89.9 0.33 1.1E-05 46.8 5.2 35 55-93 5-40 (321)
372 2a9f_A Putative malic enzyme ( 89.9 0.23 7.8E-06 48.8 4.1 36 53-92 186-222 (398)
373 3vtf_A UDP-glucose 6-dehydroge 89.9 0.28 9.7E-06 49.3 4.9 34 55-92 21-54 (444)
374 3eag_A UDP-N-acetylmuramate:L- 89.8 0.43 1.5E-05 46.1 6.1 34 56-93 5-39 (326)
375 1vpd_A Tartronate semialdehyde 89.8 0.22 7.5E-06 47.3 4.0 33 56-92 6-38 (299)
376 4dll_A 2-hydroxy-3-oxopropiona 89.8 0.25 8.5E-06 47.6 4.4 35 54-92 30-64 (320)
377 1mo9_A ORF3; nucleotide bindin 89.8 0.27 9.1E-06 51.0 4.9 35 56-94 215-249 (523)
378 1mv8_A GMD, GDP-mannose 6-dehy 89.8 0.21 7.2E-06 50.4 4.0 32 57-92 2-33 (436)
379 3c7a_A Octopine dehydrogenase; 89.7 0.27 9.3E-06 49.0 4.7 32 56-90 3-34 (404)
380 2aef_A Calcium-gated potassium 89.7 0.19 6.6E-06 45.9 3.3 34 55-93 9-42 (234)
381 1pjc_A Protein (L-alanine dehy 89.6 0.27 9.2E-06 48.3 4.5 33 56-92 168-200 (361)
382 3pid_A UDP-glucose 6-dehydroge 89.5 0.33 1.1E-05 48.7 5.1 34 55-93 36-69 (432)
383 1ldn_A L-lactate dehydrogenase 89.5 0.3 1E-05 47.0 4.6 35 54-92 5-41 (316)
384 2izz_A Pyrroline-5-carboxylate 89.3 0.28 9.6E-06 47.3 4.3 34 55-92 22-59 (322)
385 2vns_A Metalloreductase steap3 89.3 0.29 1E-05 44.1 4.2 33 56-92 29-61 (215)
386 2i6t_A Ubiquitin-conjugating e 89.3 0.26 9E-06 47.0 4.0 33 56-92 15-49 (303)
387 2pv7_A T-protein [includes: ch 89.2 0.43 1.5E-05 45.4 5.5 33 56-92 22-55 (298)
388 3d0o_A L-LDH 1, L-lactate dehy 89.2 0.3 1E-05 47.0 4.4 35 54-92 5-41 (317)
389 1txg_A Glycerol-3-phosphate de 89.1 0.24 8.1E-06 47.9 3.7 30 57-90 2-31 (335)
390 1x0v_A GPD-C, GPDH-C, glycerol 89.1 0.21 7.3E-06 48.7 3.4 34 56-93 9-49 (354)
391 3cky_A 2-hydroxymethyl glutara 88.9 0.29 9.7E-06 46.6 4.0 34 55-92 4-37 (301)
392 1a5z_A L-lactate dehydrogenase 88.5 0.3 1E-05 47.1 3.9 32 57-92 2-35 (319)
393 2eez_A Alanine dehydrogenase; 88.4 0.41 1.4E-05 47.1 4.8 34 55-92 166-199 (369)
394 2f1k_A Prephenate dehydrogenas 88.4 0.4 1.4E-05 45.0 4.6 32 57-92 2-33 (279)
395 4huj_A Uncharacterized protein 88.4 0.19 6.5E-06 45.5 2.2 33 56-92 24-57 (220)
396 2p4q_A 6-phosphogluconate dehy 88.4 0.37 1.3E-05 49.5 4.6 36 54-93 9-44 (497)
397 2zyd_A 6-phosphogluconate dehy 88.3 0.38 1.3E-05 49.1 4.7 35 54-92 14-48 (480)
398 1jay_A Coenzyme F420H2:NADP+ o 88.3 0.46 1.6E-05 42.4 4.8 32 57-92 2-34 (212)
399 3c24_A Putative oxidoreductase 88.3 0.48 1.6E-05 44.7 5.1 33 56-92 12-45 (286)
400 2rcy_A Pyrroline carboxylate r 88.3 0.35 1.2E-05 44.9 4.1 33 56-92 5-41 (262)
401 1oju_A MDH, malate dehydrogena 88.2 0.33 1.1E-05 46.1 3.8 32 57-92 2-35 (294)
402 3o0h_A Glutathione reductase; 88.0 0.42 1.4E-05 48.9 4.9 36 55-94 191-226 (484)
403 2vhw_A Alanine dehydrogenase; 88.0 0.44 1.5E-05 47.0 4.8 34 55-92 168-201 (377)
404 1vl6_A Malate oxidoreductase; 88.0 0.36 1.2E-05 47.3 4.0 36 53-92 190-226 (388)
405 3ktd_A Prephenate dehydrogenas 88.0 0.45 1.5E-05 46.2 4.8 34 55-92 8-41 (341)
406 4gwg_A 6-phosphogluconate dehy 87.9 0.43 1.5E-05 48.7 4.7 35 55-93 4-38 (484)
407 2h78_A Hibadh, 3-hydroxyisobut 87.8 0.36 1.2E-05 45.9 3.9 33 56-92 4-36 (302)
408 3pdu_A 3-hydroxyisobutyrate de 87.7 0.25 8.6E-06 46.7 2.7 33 57-93 3-35 (287)
409 1dlj_A UDP-glucose dehydrogena 87.7 0.49 1.7E-05 47.1 5.0 31 57-92 2-32 (402)
410 2z3y_A Lysine-specific histone 87.6 8.8 0.0003 40.7 15.0 37 393-432 623-659 (662)
411 1yqg_A Pyrroline-5-carboxylate 87.5 0.38 1.3E-05 44.6 3.9 32 57-92 2-34 (263)
412 3nep_X Malate dehydrogenase; h 87.5 0.4 1.4E-05 46.0 4.0 33 57-93 2-36 (314)
413 1ez4_A Lactate dehydrogenase; 87.2 0.45 1.5E-05 45.8 4.2 36 53-92 3-40 (318)
414 1hyh_A L-hicdh, L-2-hydroxyiso 87.2 0.4 1.4E-05 45.9 3.9 32 57-92 3-36 (309)
415 2g5c_A Prephenate dehydrogenas 87.2 0.51 1.7E-05 44.3 4.6 32 57-92 3-36 (281)
416 3ius_A Uncharacterized conserv 87.2 0.52 1.8E-05 44.1 4.6 33 56-92 6-38 (286)
417 2vdc_G Glutamate synthase [NAD 87.2 0.52 1.8E-05 47.9 4.8 36 54-93 263-299 (456)
418 3ldh_A Lactate dehydrogenase; 87.2 0.57 1.9E-05 45.1 4.8 34 55-92 21-56 (330)
419 3tri_A Pyrroline-5-carboxylate 87.1 0.5 1.7E-05 44.5 4.4 34 55-92 3-39 (280)
420 1yj8_A Glycerol-3-phosphate de 87.1 0.33 1.1E-05 47.8 3.3 34 56-93 22-62 (375)
421 4ffl_A PYLC; amino acid, biosy 87.0 0.56 1.9E-05 45.9 4.9 34 57-94 3-36 (363)
422 2wtb_A MFP2, fatty acid multif 87.0 0.57 2E-05 50.5 5.3 34 56-93 313-346 (725)
423 3e8x_A Putative NAD-dependent 86.9 0.53 1.8E-05 42.7 4.4 36 54-93 20-56 (236)
424 2q3e_A UDP-glucose 6-dehydroge 86.9 0.4 1.4E-05 48.8 3.8 35 56-92 6-40 (467)
425 3vku_A L-LDH, L-lactate dehydr 86.8 0.51 1.7E-05 45.4 4.3 35 54-92 8-44 (326)
426 1nyt_A Shikimate 5-dehydrogena 86.8 0.61 2.1E-05 43.7 4.8 34 55-92 119-152 (271)
427 2pgd_A 6-phosphogluconate dehy 86.8 0.5 1.7E-05 48.3 4.5 33 56-92 3-35 (482)
428 2egg_A AROE, shikimate 5-dehyd 86.8 0.67 2.3E-05 44.0 5.1 34 55-92 141-175 (297)
429 3gt0_A Pyrroline-5-carboxylate 86.8 0.55 1.9E-05 43.2 4.4 33 56-92 3-39 (247)
430 3phh_A Shikimate dehydrogenase 86.7 0.62 2.1E-05 43.5 4.7 35 55-93 118-152 (269)
431 3abi_A Putative uncharacterize 86.7 0.63 2.1E-05 45.7 5.0 37 51-92 12-48 (365)
432 1pjq_A CYSG, siroheme synthase 86.6 0.53 1.8E-05 47.8 4.6 34 55-92 12-45 (457)
433 2gf2_A Hibadh, 3-hydroxyisobut 86.6 0.44 1.5E-05 45.1 3.8 32 57-92 2-33 (296)
434 2we8_A Xanthine dehydrogenase; 86.6 0.65 2.2E-05 45.8 5.0 37 54-94 203-239 (386)
435 4gbj_A 6-phosphogluconate dehy 86.5 0.39 1.3E-05 45.7 3.3 35 56-94 6-40 (297)
436 3q2o_A Phosphoribosylaminoimid 86.3 1.7 5.8E-05 42.9 8.1 36 54-93 13-48 (389)
437 3orq_A N5-carboxyaminoimidazol 86.2 0.88 3E-05 44.8 5.9 36 54-93 11-46 (377)
438 2ahr_A Putative pyrroline carb 86.1 0.76 2.6E-05 42.5 5.1 33 56-92 4-36 (259)
439 4aj2_A L-lactate dehydrogenase 85.9 0.81 2.8E-05 44.1 5.2 35 54-92 18-54 (331)
440 3d4o_A Dipicolinate synthase s 85.5 0.75 2.6E-05 43.6 4.8 35 54-92 154-188 (293)
441 2rir_A Dipicolinate synthase, 85.4 0.76 2.6E-05 43.7 4.8 35 54-92 156-190 (300)
442 1pgj_A 6PGDH, 6-PGDH, 6-phosph 85.4 0.6 2.1E-05 47.7 4.3 32 57-92 3-34 (478)
443 3gvp_A Adenosylhomocysteinase 85.4 0.58 2E-05 46.6 3.9 35 54-92 219-253 (435)
444 1d5t_A Guanine nucleotide diss 85.4 0.58 2E-05 47.1 4.1 57 171-248 234-291 (433)
445 2o3j_A UDP-glucose 6-dehydroge 85.3 0.58 2E-05 47.8 4.1 35 56-92 10-44 (481)
446 3ond_A Adenosylhomocysteinase; 85.2 0.7 2.4E-05 46.8 4.5 35 54-92 264-298 (488)
447 1wdk_A Fatty oxidation complex 85.0 0.66 2.2E-05 49.9 4.5 35 55-93 314-348 (715)
448 2iz1_A 6-phosphogluconate dehy 84.9 0.74 2.5E-05 46.9 4.7 34 55-92 5-38 (474)
449 1np3_A Ketol-acid reductoisome 84.8 0.77 2.6E-05 44.5 4.5 33 56-92 17-49 (338)
450 3ce6_A Adenosylhomocysteinase; 84.8 0.74 2.5E-05 47.0 4.5 35 54-92 273-307 (494)
451 1zud_1 Adenylyltransferase THI 84.8 0.71 2.4E-05 42.7 4.1 34 55-92 28-62 (251)
452 4gx0_A TRKA domain protein; me 84.7 0.68 2.3E-05 48.4 4.4 35 56-94 349-383 (565)
453 2zqz_A L-LDH, L-lactate dehydr 84.6 0.79 2.7E-05 44.2 4.5 35 54-92 8-44 (326)
454 4e4t_A Phosphoribosylaminoimid 84.5 1.1 3.8E-05 44.8 5.7 35 54-92 34-68 (419)
455 1i36_A Conserved hypothetical 84.3 0.69 2.3E-05 42.9 3.8 30 57-90 2-31 (264)
456 4g65_A TRK system potassium up 84.2 0.87 3E-05 46.2 4.8 34 55-93 235-268 (461)
457 3gpi_A NAD-dependent epimerase 84.2 0.93 3.2E-05 42.4 4.8 34 56-93 4-37 (286)
458 3zwc_A Peroxisomal bifunctiona 84.1 1.1 3.8E-05 48.2 5.7 35 55-93 316-350 (742)
459 2hk9_A Shikimate dehydrogenase 84.0 0.73 2.5E-05 43.2 3.9 34 55-92 129-162 (275)
460 1p77_A Shikimate 5-dehydrogena 84.0 0.7 2.4E-05 43.3 3.7 34 55-92 119-152 (272)
461 3fi9_A Malate dehydrogenase; s 83.9 0.93 3.2E-05 43.9 4.6 34 55-92 8-44 (343)
462 1nvt_A Shikimate 5'-dehydrogen 83.8 1.2 4E-05 42.1 5.2 33 55-92 128-160 (287)
463 3on5_A BH1974 protein; structu 83.8 0.6 2E-05 45.5 3.2 37 54-94 198-234 (362)
464 3h8v_A Ubiquitin-like modifier 83.7 0.72 2.5E-05 43.6 3.6 35 55-93 36-71 (292)
465 2bcg_G Secretory pathway GDP d 83.6 1.2 4E-05 45.1 5.5 56 171-248 242-301 (453)
466 3ew7_A LMO0794 protein; Q8Y8U8 83.5 1 3.6E-05 40.0 4.6 32 57-92 2-34 (221)
467 3don_A Shikimate dehydrogenase 83.4 0.8 2.7E-05 43.0 3.8 36 55-94 117-153 (277)
468 3d1l_A Putative NADP oxidoredu 83.4 0.73 2.5E-05 42.8 3.6 33 56-92 11-44 (266)
469 1b8p_A Protein (malate dehydro 83.4 0.87 3E-05 44.0 4.2 34 54-91 4-45 (329)
470 3dhn_A NAD-dependent epimerase 83.1 1.1 3.7E-05 40.2 4.5 35 56-94 5-40 (227)
471 1mld_A Malate dehydrogenase; o 83.0 0.95 3.2E-05 43.4 4.3 32 57-92 2-36 (314)
472 3rui_A Ubiquitin-like modifier 82.9 1 3.5E-05 43.5 4.4 35 55-93 34-69 (340)
473 2d4a_B Malate dehydrogenase; a 82.9 0.82 2.8E-05 43.7 3.7 32 57-92 1-33 (308)
474 1edz_A 5,10-methylenetetrahydr 82.6 1.1 3.8E-05 42.8 4.4 34 54-91 176-210 (320)
475 3u62_A Shikimate dehydrogenase 82.6 1 3.5E-05 41.6 4.2 33 57-93 110-143 (253)
476 2xag_A Lysine-specific histone 82.5 12 0.00041 41.0 13.2 38 393-433 794-831 (852)
477 3ojo_A CAP5O; rossmann fold, c 82.5 0.87 3E-05 45.6 3.9 35 55-93 11-45 (431)
478 1yb4_A Tartronic semialdehyde 82.4 0.65 2.2E-05 43.8 2.8 32 56-92 4-35 (295)
479 2yjz_A Metalloreductase steap4 83.1 0.26 8.9E-06 44.0 0.0 35 55-93 19-53 (201)
480 3jyo_A Quinate/shikimate dehyd 82.2 1.3 4.5E-05 41.6 4.8 35 54-92 126-161 (283)
481 1hdo_A Biliverdin IX beta redu 82.2 1.3 4.6E-05 38.7 4.7 34 56-93 4-38 (206)
482 1kjq_A GART 2, phosphoribosylg 82.1 1.6 5.5E-05 43.0 5.7 37 53-93 9-45 (391)
483 3o38_A Short chain dehydrogena 82.0 1.3 4.4E-05 41.0 4.7 35 54-92 21-57 (266)
484 3o8q_A Shikimate 5-dehydrogena 82.0 1.5 5.1E-05 41.2 5.1 35 54-92 125-160 (281)
485 3h2s_A Putative NADH-flavin re 81.9 1.3 4.3E-05 39.6 4.5 32 57-92 2-34 (224)
486 2dbq_A Glyoxylate reductase; D 81.9 1.4 4.8E-05 42.5 5.1 34 55-92 150-183 (334)
487 2d5c_A AROE, shikimate 5-dehyd 81.8 1.1 3.8E-05 41.6 4.2 32 57-92 118-149 (263)
488 2pzm_A Putative nucleotide sug 81.7 1.8 6E-05 41.5 5.7 36 54-93 19-55 (330)
489 3qvo_A NMRA family protein; st 81.7 1.4 4.8E-05 39.9 4.8 36 55-94 23-60 (236)
490 3tnl_A Shikimate dehydrogenase 81.5 1.4 4.7E-05 42.2 4.7 35 54-92 153-188 (315)
491 4egb_A DTDP-glucose 4,6-dehydr 81.5 0.97 3.3E-05 43.6 3.8 42 47-92 16-60 (346)
492 3h9u_A Adenosylhomocysteinase; 81.4 1 3.6E-05 44.8 3.9 35 54-92 210-244 (436)
493 3k5i_A Phosphoribosyl-aminoimi 81.2 1.3 4.3E-05 44.1 4.5 34 54-92 23-56 (403)
494 3pwz_A Shikimate dehydrogenase 81.2 1.5 5.3E-05 40.9 4.9 35 54-92 119-154 (272)
495 3n58_A Adenosylhomocysteinase; 80.8 1.1 3.8E-05 44.7 3.9 36 53-92 245-280 (464)
496 1gpj_A Glutamyl-tRNA reductase 80.8 1.1 3.9E-05 44.5 4.1 35 54-92 166-201 (404)
497 1smk_A Malate dehydrogenase, g 80.8 1.1 3.7E-05 43.2 3.8 34 55-92 8-44 (326)
498 3k30_A Histamine dehydrogenase 80.6 0.89 3.1E-05 48.8 3.4 36 55-94 523-560 (690)
499 1y7t_A Malate dehydrogenase; N 80.6 1.3 4.4E-05 42.7 4.3 34 55-92 4-45 (327)
500 1leh_A Leucine dehydrogenase; 80.5 1.6 5.4E-05 42.7 4.9 34 54-91 172-205 (364)
No 1
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=100.00 E-value=2.5e-43 Score=369.62 Aligned_cols=370 Identities=18% Similarity=0.206 Sum_probs=287.3
Q ss_pred CCCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHH
Q 010225 52 NDDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQ 131 (514)
Q Consensus 52 ~~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~ 131 (514)
.++++||+||||||+||++|+.|++. |++|+||||.+.+ ...+++..++++++++|+++|+++++.
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~~----G~~v~vlE~~~~~----------~~~~r~~~l~~~~~~~l~~lGl~~~~~ 73 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRLA----GVEVVVLERLVER----------TGESRGLGFTARTMEVFDQRGILPRFG 73 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHT----TCCEEEEESCCC-----------CCCCCSEEECHHHHHHHHTTTCGGGGC
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHC----CCCEEEEeCCCCC----------CCCCCcceECHHHHHHHHHCCCHHHHH
Confidence 45679999999999999999999996 9999999999876 345678999999999999999998886
Q ss_pred hhhccCcceEEEEeCCCcceeeeccCCCC-CcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccC
Q 010225 132 QHRHAYFDKMQVWDYTGLGYTKYNARDVN-KEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVD 210 (514)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~ 210 (514)
.. . ...... +. + ..++..... ..+..+.+++..+.+.|.+.+++.| ++|+++++|+++++
T Consensus 74 ~~-~-~~~~~~-~~--~---~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~g-v~v~~~~~v~~i~~---------- 134 (500)
T 2qa1_A 74 EV-E-TSTQGH-FG--G---LPIDFGVLEGAWQAAKTVPQSVTETHLEQWATGLG-ADIRRGHEVLSLTD---------- 134 (500)
T ss_dssp SC-C-BCCEEE-ET--T---EEEEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTT-CEEEETCEEEEEEE----------
T ss_pred hc-c-cccccc-cc--c---eecccccCCCCCCceeecCHHHHHHHHHHHHHHCC-CEEECCcEEEEEEE----------
Confidence 64 2 222221 11 1 112221222 2335688999999999999999987 99999999999987
Q ss_pred CCCccccccccCCeeEEEeCCCc---EEEeeE-EEecCCCchhhhhhCCCccCCCCCceEEEEEEEecCCCcceEEEecC
Q 010225 211 STPSATTLFTKGHLAKLDLSDGT---SLYAKL-VGADGGKSRVRELAGFKTTGWSYSQNAIICTVEHNKENYCAWQRFLP 286 (514)
Q Consensus 211 ~~~~~~~~~~~~~~~~v~~~~g~---~~~ad~-V~AdG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (514)
+++.++|++.++. +++||+ |+|||.+|.||+++++...+..+...++.+.+............+.+
T Consensus 135 ----------~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S~VR~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (500)
T 2qa1_A 135 ----------DGAGVTVEVRGPEGKHTLRAAYLVGCDGGRSSVRKAAGFDFPGTAATMEMYLADIKGVELQPRMIGETLP 204 (500)
T ss_dssp ----------ETTEEEEEEEETTEEEEEEESEEEECCCTTCHHHHHTTCCCCEECCCCEEEEEEEESCCCCCEEEEEEET
T ss_pred ----------cCCeEEEEEEcCCCCEEEEeCEEEECCCcchHHHHHcCCCcCCCccceEEEEEEEEeCCCCCceEEEECC
Confidence 4456788887765 799999 99999999999999988887777777888877765433334445678
Q ss_pred CCceEEeecCCCceEEEEEcCcc-chHHhhCCCHHHHHHHHHHhhcCCCCCCCCCCCCCccccccccccCcccccccccc
Q 010225 287 AGPIALLPIGDNFSNIVWTMNPK-DASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFE 365 (514)
Q Consensus 287 ~g~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (514)
.++++++|.+++.+++++..... ........+.+++.+.+.+.+.....
T Consensus 205 ~g~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~------------------------------ 254 (500)
T 2qa1_A 205 GGMVMVGPLPGGITRIIVCERGTPPQRRETPPSWHEVADAWKRLTGDDIA------------------------------ 254 (500)
T ss_dssp TEEEEEEEETTTEEEEEEEETTCCC-----CCCHHHHHHHHHHHHSCCCT------------------------------
T ss_pred CcEEEEEEcCCCEEEEEEEcCCCCCccccCCCCHHHHHHHHHHhcCCCCC------------------------------
Confidence 89999999999888887765332 22223446778888888775531000
Q ss_pred CCCceeeeccceeeeecccccccccccCcEEEEcccccccCCcccccchhhhHHHHHHHHHHHHhhhcCCCcchHHHHHH
Q 010225 366 VPPRVVKLASERMVFPLSLKHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKK 445 (514)
Q Consensus 366 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~LvGDAAh~~~P~~GqG~~~al~da~~La~~l~~~~~~~~~~~~~~~l~~ 445 (514)
+ .+ ......|++..+.+++|..+||+|+|||||.++|+.|||+|+||+||.+|+++|...++.. ..+.+|+.
T Consensus 255 ~----~~-~~~~~~~~~~~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~~~g~---~~~~~L~~ 326 (500)
T 2qa1_A 255 H----AE-PVWVSAFGNATRQVTEYRRGRVILAGDSAHIHLPAGGQGMNTSIQDAVNLGWKLGAVVNGT---ATEELLDS 326 (500)
T ss_dssp T----SE-EEEEEEEECCEEECSCSEETTEEECGGGTEECCCCSSCHHHHHHHHHHHHHHHHHHHHTTS---SCHHHHHH
T ss_pred c----cc-eeEEEEeccCcEEccccccCCEEEEEccccCCCCccccchhhhHHHHHHHHHHHHHHHcCC---CChHHHHH
Confidence 0 00 0122347777777889999999999999999999999999999999999999999988632 34789999
Q ss_pred HHHHhhHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHhccChhHHHHHHHHhhcCC
Q 010225 446 YEAERKPANIVMMAVLDGFQKAYSVDFGPLNILRAAAFHGAQYISPLKRNIISYASGEQ 504 (514)
Q Consensus 446 Y~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~g~~ 504 (514)
|+++|++++..++..++.+.+++.. .+....+|+.++..+ ..|.+++.+.+..+|.+
T Consensus 327 Y~~eR~~~~~~~~~~s~~~~~l~~~-~~~~~~~R~~~~~~~-~~~~~~~~~~~~~~g~~ 383 (500)
T 2qa1_A 327 YHSERHAVGKRLLMNTQAQGLLFLS-GPEVQPLRDVLTELI-QYGEVARHLAGMVSGLE 383 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHS-CGGGHHHHHHHHHHH-TSHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC-CchHHHHHHHHHHhh-cCHHHHHHHhhhhccCC
Confidence 9999999999999999999999984 677778999887776 68899999988888764
No 2
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=100.00 E-value=2e-43 Score=370.29 Aligned_cols=370 Identities=19% Similarity=0.234 Sum_probs=287.3
Q ss_pred CCCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHH
Q 010225 52 NDDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQ 131 (514)
Q Consensus 52 ~~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~ 131 (514)
.++++||+||||||+||++|+.|++. |++|+||||.+.+ ...+++..++++++++|+++|+++.+.
T Consensus 9 ~~~~~dVlIVGaGpaGl~~A~~La~~----G~~v~vlE~~~~~----------~~~~r~~~l~~~~~~~l~~lGl~~~~~ 74 (499)
T 2qa2_A 9 HRSDASVIVVGAGPAGLMLAGELRLG----GVDVMVLEQLPQR----------TGESRGLGFTARTMEVFDQRGILPAFG 74 (499)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHT----TCCEEEEESCSSC----------CCCCCSEEECHHHHHHHHHTTCGGGGC
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHHC----CCCEEEEECCCCC----------CCCCceeEECHHHHHHHHHCCCHHHHH
Confidence 34679999999999999999999996 9999999999876 345678999999999999999998876
Q ss_pred hhhccCcceEEEEeCCCcceeeeccCCCC-CcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccC
Q 010225 132 QHRHAYFDKMQVWDYTGLGYTKYNARDVN-KEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVD 210 (514)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~ 210 (514)
.. . ...... +. + ..++..... ..+.++.+++..+.+.|.+.+.+.| ++|+++++|+++++
T Consensus 75 ~~-~-~~~~~~-~~--~---~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~g-v~v~~~~~v~~i~~---------- 135 (499)
T 2qa2_A 75 PV-E-TSTQGH-FG--G---RPVDFGVLEGAHYGVKAVPQSTTESVLEEWALGRG-AELLRGHTVRALTD---------- 135 (499)
T ss_dssp SC-C-EESEEE-ET--T---EEEEGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTT-CEEEESCEEEEEEE----------
T ss_pred hc-c-ccccce-ec--c---eecccccCCCCCCceEecCHHHHHHHHHHHHHhCC-CEEEcCCEEEEEEE----------
Confidence 54 1 222111 11 1 122222222 2335688999999999999999887 99999999999987
Q ss_pred CCCccccccccCCeeEEEeCCCc---EEEeeE-EEecCCCchhhhhhCCCccCCCCCceEEEEEEEecCCCcceEEEecC
Q 010225 211 STPSATTLFTKGHLAKLDLSDGT---SLYAKL-VGADGGKSRVRELAGFKTTGWSYSQNAIICTVEHNKENYCAWQRFLP 286 (514)
Q Consensus 211 ~~~~~~~~~~~~~~~~v~~~~g~---~~~ad~-V~AdG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (514)
+++.++|++.++. +++||+ |+|||.+|.||+.+++...+..+...++.+.++.+.+.......+.+
T Consensus 136 ----------~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S~VR~~lg~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 205 (499)
T 2qa2_A 136 ----------EGDHVVVEVEGPDGPRSLTTRYVVGCDGGRSTVRKAAGFDFPGTSASREMFLADIRGCEITPRPIGETVP 205 (499)
T ss_dssp ----------CSSCEEEEEECSSCEEEEEEEEEEECCCTTCHHHHHTTCCCCEECCCCCEEEEEEESCCCCCEEEEEEET
T ss_pred ----------eCCEEEEEEEcCCCcEEEEeCEEEEccCcccHHHHHcCCCCCCCCCccEEEEEEEEECCCCcceEEEECC
Confidence 3456778887775 799999 99999999999999988887777777888887765433334445678
Q ss_pred CCceEEeecCCCceEEEEEcCccc-hHHhhCCCHHHHHHHHHHhhcCCCCCCCCCCCCCccccccccccCcccccccccc
Q 010225 287 AGPIALLPIGDNFSNIVWTMNPKD-ASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFE 365 (514)
Q Consensus 287 ~g~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (514)
.++++++|.+++.+++++...... .......+.+++.+.+...+.....
T Consensus 206 ~g~~~~~P~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~------------------------------ 255 (499)
T 2qa2_A 206 LGMVMSAPLGDGVDRIIVCERGAPARRRTGPPPYQEVAAAWQRLTGQDIS------------------------------ 255 (499)
T ss_dssp TEEEEEEECSSSCEEEEEEETTCCCCCCSSSCCHHHHHHHHHHHHSCCCT------------------------------
T ss_pred CeEEEEEEcCCCEEEEEEEecCCCCccccCCCCHHHHHHHHHHHhCCCCC------------------------------
Confidence 899999999988888877653321 1122346778888888775531000
Q ss_pred CCCceeeeccceeeeecccccccccccCcEEEEcccccccCCcccccchhhhHHHHHHHHHHHHhhhcCCCcchHHHHHH
Q 010225 366 VPPRVVKLASERMVFPLSLKHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKK 445 (514)
Q Consensus 366 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~LvGDAAh~~~P~~GqG~~~al~da~~La~~l~~~~~~~~~~~~~~~l~~ 445 (514)
+ .+ ......|++..+.+++|..+||+|+|||||.++|+.|||+|+||+||.+|+++|...++.. ..+.+|+.
T Consensus 256 ~----~~-~~~~~~~~~~~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~l~g~---~~~~~L~~ 327 (499)
T 2qa2_A 256 H----GE-PVWVSAFGDPARQVSAYRRGRVLLAGDSAHVHLPAGGQGMNVSVQDSVNLGWKLAAVVSGR---APAGLLDT 327 (499)
T ss_dssp T----CE-EEEEEEECCCEEECSCSEETTEEECGGGTEEECCCSSCHHHHHHHHHHHHHHHHHHHHTTS---SCTHHHHH
T ss_pred c----cc-eeEEEEEeCCcEEcccccCCCEEEEecccccCCCccccchhhhHHHHHHHHHHHHHHHcCC---CChHHHHH
Confidence 0 00 1122347777777889999999999999999999999999999999999999999988632 23789999
Q ss_pred HHHHhhHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHhccChhHHHHHHHHhhcCC
Q 010225 446 YEAERKPANIVMMAVLDGFQKAYSVDFGPLNILRAAAFHGAQYISPLKRNIISYASGEQ 504 (514)
Q Consensus 446 Y~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~g~~ 504 (514)
|+++|++++..++..++.+.+++.. ++....+|+.++..+ ..|.+++.+....+|.+
T Consensus 328 Ye~eR~~~~~~~~~~s~~~~~l~~~-~~~~~~~R~~~~~~~-~~~~~~~~~~~~~~~~~ 384 (499)
T 2qa2_A 328 YHEERHPVGRRLLMNTQAQGMLFLS-GDEMQPLRDVLSELI-RYDEVSRHLAGMVSGLD 384 (499)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHC-CGGGHHHHHHHHHHH-TSSHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC-CchHHHHHHHHHHhh-cCHHHHHHHHHHHhCCC
Confidence 9999999999999999999999984 677788999888777 68889998888888765
No 3
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=100.00 E-value=9.9e-45 Score=385.12 Aligned_cols=374 Identities=21% Similarity=0.223 Sum_probs=286.8
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHh
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQ 132 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~ 132 (514)
.+++||+||||||+||++|+.|++. |++|+||||.+.+ ...+++..++++++++|+++|+++.+..
T Consensus 47 ~~~~DVvIVGaG~aGL~~A~~La~~----G~~V~VlEr~~~~----------~~~~r~~~l~~~s~~~l~~lGl~~~l~~ 112 (570)
T 3fmw_A 47 ALTTDVVVVGGGPVGLMLAGELRAG----GVGALVLEKLVEP----------VGHDRAGALHIRTVETLDLRGLLDRFLE 112 (570)
T ss_dssp ----CEEEECCSHHHHHHHHHHHHT----TCCEEEEBSCSSC----------CCSSSCCCBCHHHHHHHHTTTCHHHHTT
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC----CCCEEEEcCCCCC----------CCCceEEEECHHHHHHHHHcCChHHHHh
Confidence 4578999999999999999999996 9999999999876 3456789999999999999999999887
Q ss_pred hhccCcceEEEEeCCCcceeeeccCCCC-CcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCC
Q 010225 133 HRHAYFDKMQVWDYTGLGYTKYNARDVN-KEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDS 211 (514)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~ 211 (514)
........ .+.. .....++..... ..+.++.+++..+.+.|.+.+++.| ++|+++++|++++.
T Consensus 113 ~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~g-v~i~~~~~v~~l~~----------- 176 (570)
T 3fmw_A 113 GTQVAKGL--PFAG--IFTQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAG-AEIPRGHEVTRLRQ----------- 176 (570)
T ss_dssp SCCBCSBC--CBTT--BCTTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHT-EECCBSCEEEECCB-----------
T ss_pred cCcccCCc--eeCC--cccccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCC-CEEEeCCEEEEEEE-----------
Confidence 65532211 0111 100012211211 2334678999999999999999876 99999999999986
Q ss_pred CCccccccccCCeeEEEe--CCC-cEEEeeE-EEecCCCchhhhhhCCCccCCCCCceEEEEEEEecCCCcceEE-EecC
Q 010225 212 TPSATTLFTKGHLAKLDL--SDG-TSLYAKL-VGADGGKSRVRELAGFKTTGWSYSQNAIICTVEHNKENYCAWQ-RFLP 286 (514)
Q Consensus 212 ~~~~~~~~~~~~~~~v~~--~~g-~~~~ad~-V~AdG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 286 (514)
+++.++|++ .+| .+++||+ |+|||.+|.||+.+++...+..+...++.+.+....+. ..+. .+.+
T Consensus 177 ---------~~~~v~v~~~~~~G~~~~~a~~vV~ADG~~S~vR~~lGi~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~ 246 (570)
T 3fmw_A 177 ---------DAEAVEVTVAGPSGPYPVRARYGVGCDGGRSTVRRLAADRFPGTEATVRALIGYVTTPERE-VPRRWERTP 246 (570)
T ss_dssp ---------CSSCEEEEEEETTEEEEEEESEEEECSCSSCHHHHHTTCCCCCCCCCEEEEEEECCCCSCS-SCCCCCCCC
T ss_pred ---------cCCeEEEEEEeCCCcEEEEeCEEEEcCCCCchHHHHcCCCCccceeeeEEEEEEEEecCCC-cceEEEecC
Confidence 345677776 678 6899999 99999999999999999888888888888887766554 1222 3557
Q ss_pred CCceEE-eecCCCce-EEEEEcCccc-hHHhhCCCHHHHHHHHHHhhcCCCCCCCCCCCCCccccccccccCcccccccc
Q 010225 287 AGPIAL-LPIGDNFS-NIVWTMNPKD-ASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKEC 363 (514)
Q Consensus 287 ~g~~~~-~p~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (514)
.|++++ +|++++.. +++|...... .......+.+++.+.+...+. .. ++
T Consensus 247 ~G~~~~~~P~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~---------------~~--------- 298 (570)
T 3fmw_A 247 DGILVLAFPPEGGLGPGWSSSSTGHSPAADEGPVTLEDLGAAVARVRG----TP---------------LT--------- 298 (570)
T ss_dssp SSCEEECCCC------CEEEEEESCC-----CCCCHHHHHHHTTSSSS----CC---------------CC---------
T ss_pred CEEEEEEeecCCCeEEEEEEEeCCCCccccccCCCHHHHHHHHHHHhh----cc---------------cc---------
Confidence 788888 89998887 7887765433 223345677777777655332 00 00
Q ss_pred ccCCCceeeeccceeeeecccccccccccCcEEEEcccccccCCcccccchhhhHHHHHHHHHHHHhhhcCCCcchHHHH
Q 010225 364 FEVPPRVVKLASERMVFPLSLKHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLL 443 (514)
Q Consensus 364 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~LvGDAAh~~~P~~GqG~~~al~da~~La~~l~~~~~~~~~~~~~~~l 443 (514)
......+...||+..+.+.+|..+||+|+|||||.++|+.|||+|+||+||.+|+++|..+++.. +...+|
T Consensus 299 ------~~~~~~~~~~~~~~~~~a~~~~~grv~LvGDAAH~~~P~~GqG~n~gl~DA~~La~~La~~~~g~---~~~~lL 369 (570)
T 3fmw_A 299 ------LTEPVSWLSRFGDASRQAKRYRSGRVLLAGDAAHVHFPIGGQGLNTGLQDAVNLGWKLAARVRGW---GSEELL 369 (570)
T ss_dssp ------CCSCCEEEEEECCCCEECSCSEETTEEECGGGTEECCCCSSCHHHHHHHHHHHHHHHHHHHHHSC---CCHHHH
T ss_pred ------cceeeeeeEEeecccccccccccCCEEEEEecceecCCCcCcCHhHHHHHHHHHHHHHHHHHcCC---CcHHHH
Confidence 01111244568888888999999999999999999999999999999999999999999988632 348899
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHhccChhHHHHHHHHhhcCC
Q 010225 444 KKYEAERKPANIVMMAVLDGFQKAYSVDFGPLNILRAAAFHGAQYISPLKRNIISYASGEQ 504 (514)
Q Consensus 444 ~~Y~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~g~~ 504 (514)
+.|+++|++++..++..++.+.++|+...++...+|+.++.++ ..|.+++.+++.++|..
T Consensus 370 ~~Ye~eR~~~~~~~~~~s~~~~~l~~~~~~~~~~lR~~~~~l~-~~~~~~~~~~~~~~g~~ 429 (570)
T 3fmw_A 370 DTYHDERHPVAERVLLNTRAQLALMRPDEQHTTPLRGFVEELL-GTDEVNRYFTGMITGTD 429 (570)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCSCTTTHHHHHHHHHHHT-TSHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh-cCHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999987666899999999988 79999999999999886
No 4
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=100.00 E-value=8.7e-44 Score=364.08 Aligned_cols=368 Identities=19% Similarity=0.220 Sum_probs=270.2
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHh
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQ 132 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~ 132 (514)
..++||+||||||+|+++|+.|++. |++|+|||+++.+ ...+++..+++++.++|+++|+++.+..
T Consensus 4 ~~~~dVvIVGaG~aGl~~A~~L~~~----G~~V~viE~~~~~----------~~~~~~~~l~~~~~~~l~~~g~~~~~~~ 69 (399)
T 2x3n_A 4 DNHIDVLINGCGIGGAMLAYLLGRQ----GHRVVVVEQARRE----------RAINGADLLKPAGIRVVEAAGLLAEVTR 69 (399)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHT----TCCEEEECSSCCC-------------CCCCEECHHHHHHHHHTTCHHHHHH
T ss_pred CCcCCEEEECcCHHHHHHHHHHHhC----CCcEEEEeCCCCC----------CccCceeeECchHHHHHHHcCcHHHHHH
Confidence 3468999999999999999999996 9999999998765 3455678999999999999999998876
Q ss_pred hhccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCC
Q 010225 133 HRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDST 212 (514)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~ 212 (514)
... ....+.+++..+.....++.........++.++|..|.+.|.+.+++.++++|+++++|++++.
T Consensus 70 ~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~------------ 136 (399)
T 2x3n_A 70 RGG-RVRHELEVYHDGELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQR------------ 136 (399)
T ss_dssp TTC-EEECEEEEEETTEEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEE------------
T ss_pred hCC-CcceeEEEeCCCCEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEE------------
Confidence 544 4566677765554344444433334456789999999999999999883499999999999987
Q ss_pred CccccccccCCee--EEEeCCCcEEEeeE-EEecCCCchhhhhhCCCccCC--CCCc--eEEEEEEEecCCCcceEEEec
Q 010225 213 PSATTLFTKGHLA--KLDLSDGTSLYAKL-VGADGGKSRVRELAGFKTTGW--SYSQ--NAIICTVEHNKENYCAWQRFL 285 (514)
Q Consensus 213 ~~~~~~~~~~~~~--~v~~~~g~~~~ad~-V~AdG~~S~vR~~l~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~ 285 (514)
+++.+ .|++.+|++++||+ |+|||.+|.+|+.++...... .++. .++.+.++.+.+.. . .++.
T Consensus 137 --------~~~~v~g~v~~~~g~~~~ad~vV~AdG~~s~vr~~lg~~~~~~~p~~~~~~~~~~~~~~~~~~~~-~-~~~~ 206 (399)
T 2x3n_A 137 --------DERHAIDQVRLNDGRVLRPRVVVGADGIASYVRRRLLDIDVERRPYPSPMLVGTFALAPCVAERN-R-LYVD 206 (399)
T ss_dssp --------CTTSCEEEEEETTSCEEEEEEEEECCCTTCHHHHHTSCCCCCCCCCSSCEEEEEEECCHHHHHCE-E-EEEC
T ss_pred --------cCCceEEEEEECCCCEEECCEEEECCCCChHHHHHhCCCccccCCCCCCceEEEEEEecCCCCCc-c-EEEc
Confidence 33456 88889998999999 999999999999998766555 5666 66666665433333 3 6677
Q ss_pred C-CCceEEeecCCCceEEEEEcCccchHHhh-CCCHHHHHHHHHHhhcCCCCCCCCCCCCCccccccccccCcccccccc
Q 010225 286 P-AGPIALLPIGDNFSNIVWTMNPKDASDCK-SMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKEC 363 (514)
Q Consensus 286 ~-~g~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (514)
+ +++++++|++++...+.+..+.+...... ..+.+.+.+.+.. |.+.. . ...
T Consensus 207 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-------~--~~~------------ 260 (399)
T 2x3n_A 207 SQGGLAYFYPIGFDRARLVVSFPREEARELMADTRGESLRRRLQR-----FVGDE-------S--AEA------------ 260 (399)
T ss_dssp TTSCEEEEEEETTTEEEEEEECCHHHHHHHHHSTTSHHHHHHHHT-----TCCGG-------G--HHH------------
T ss_pred CCCcEEEEEEcCCCEEEEEEEeCccccccccccCCHHHHHHHHhh-----cCCcc-------h--hhH------------
Confidence 8 89999999988544433333433222221 1445555555542 22210 0 000
Q ss_pred ccCCCceeeecc--ceeeeeccc-ccccccccCcEEEEcccccccCCcccccchhhhHHHHHHHHHHHHhhhcCCCcchH
Q 010225 364 FEVPPRVVKLAS--ERMVFPLSL-KHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEA 440 (514)
Q Consensus 364 ~~~~~~~~~~~~--~~~~~p~~~-~~~~~~~~~~v~LvGDAAh~~~P~~GqG~~~al~da~~La~~l~~~~~~~~~~~~~ 440 (514)
+ +... ....||+.. ...++|..+||+|+|||||.++|++|||+|+||+||..|+++|...++.+.++ .
T Consensus 261 ------~-~~~~~~~~~~~~~~~~~~~~~~~~~rv~lvGDAAh~~~P~~GqG~~~al~da~~La~~L~~~~~~~~~~--~ 331 (399)
T 2x3n_A 261 ------I-AAVTGTSRFKGIPIGYLNLDRYWADNVAMLGDAIHNVHPITGQGMNLAIEDASALADALDLALRDACAL--E 331 (399)
T ss_dssp ------H-HTCCCSTTCEECCCCCEECSCSEETTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHHHHHHHTTSSCH--H
T ss_pred ------H-hcCCccceEEechhhcccccccccCcEEEEechhccCCCcccccHHHHHHHHHHHHHHHHhhhcccchH--H
Confidence 0 1111 234577777 66788999999999999999999999999999999999999999987654444 7
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHhccChhHH
Q 010225 441 SLLKKYEAERKPANIVMMAVLDGFQKAYSVDFGPLNILRAAAFHGAQYISPLK 493 (514)
Q Consensus 441 ~~l~~Y~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~~~~~~~~~~ 493 (514)
.+|+.|+++|++++..++..++.+.++++..+++..++ +.+|..+...|.+.
T Consensus 332 ~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 383 (399)
T 2x3n_A 332 DALAGYQAERFPVNQAIVSYGHALATSLEDRQRFAGVF-DTALQGSSRTPEAL 383 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH-HC------------
T ss_pred HHHHHHHHHhccHHHHHHHHHHHhhhhhcccCchHHHH-HHHHhhhcCCCccc
Confidence 89999999999999999999999999999988888899 99998888777543
No 5
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=100.00 E-value=3.2e-43 Score=360.86 Aligned_cols=373 Identities=17% Similarity=0.222 Sum_probs=276.3
Q ss_pred CCCCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHH
Q 010225 51 NNDDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYV 130 (514)
Q Consensus 51 ~~~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~ 130 (514)
...+++||+||||||+||++|+.|++. |++|+||||.+.+ ...+++..+++++.++|+++|+++.+
T Consensus 19 ~~~~~~dV~IVGaG~aGl~~A~~La~~----G~~V~v~E~~~~~----------~~~~~~~~l~~~~~~~l~~lg~~~~~ 84 (407)
T 3rp8_A 19 YFQGHMKAIVIGAGIGGLSAAVALKQS----GIDCDVYEAVKEI----------KPVGAAISVWPNGVKCMAHLGMGDIM 84 (407)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHT----TCEEEEEESSSCC--------------CEEEECHHHHHHHHHTTCHHHH
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHhC----CCCEEEEeCCCCC----------CCcCeeEEECHHHHHHHHHCCCHHHH
Confidence 345679999999999999999999996 9999999999866 34567899999999999999999999
Q ss_pred HhhhccCcceEEEEeCC-CcceeeeccCCC--CCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCc
Q 010225 131 QQHRHAYFDKMQVWDYT-GLGYTKYNARDV--NKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSI 207 (514)
Q Consensus 131 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~ 207 (514)
..... ....+.+++.. +.....++.... .....++.++|..|.+.|.+.+.+ ++|+++++|++++.
T Consensus 85 ~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~---~~i~~~~~v~~i~~------- 153 (407)
T 3rp8_A 85 ETFGG-PLRRMAYRDFRSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR---DSVQFGKRVTRCEE------- 153 (407)
T ss_dssp HHHSC-CCCEEEEEETTTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG---GGEEESCCEEEEEE-------
T ss_pred HhhcC-CCcceEEEECCCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc---CEEEECCEEEEEEe-------
Confidence 88766 67788888766 443344332211 112446889999999999999976 78999999999987
Q ss_pred ccCCCCccccccccCCeeEEEeCCCcEEEeeE-EEecCCCchhhhhh-CCCccCCCCCceEEEEEEEecCC--CcceEE-
Q 010225 208 SVDSTPSATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKSRVRELA-GFKTTGWSYSQNAIICTVEHNKE--NYCAWQ- 282 (514)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S~vR~~l-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~- 282 (514)
.++.+.|++.+|+++.||+ |+|||.+|.+|+.+ +........+...+.+.++.+.. ....+.
T Consensus 154 -------------~~~~v~v~~~~g~~~~a~~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (407)
T 3rp8_A 154 -------------DADGVTVWFTDGSSASGDLLIAADGSHSALRPWVLGFTPQRRYAGYVNWNGLVEIDEALAPGDQWTT 220 (407)
T ss_dssp -------------ETTEEEEEETTSCEEEESEEEECCCTTCSSHHHHHSSCCCCEEEEEEEEEEEEECCTTTCCTTEEEE
T ss_pred -------------cCCcEEEEEcCCCEEeeCEEEECCCcChHHHHHhcCCCCCCcccCcEEEEEEEecccccCCCCceEE
Confidence 4567899999999999999 99999999999999 66544444455566666664422 233333
Q ss_pred EecCCCceEEeecCCCceEEEEEcCccchHHhhCCCHHHHHHHHHHhhcCCCCCCCCCCCCCccccccccccCccccccc
Q 010225 283 RFLPAGPIALLPIGDNFSNIVWTMNPKDASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKE 362 (514)
Q Consensus 283 ~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (514)
++.++++++++|.+++...+++....... ...+.+.+.+.+.+.+. .|.+. +..++....
T Consensus 221 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~-~~~~~-----------~~~~~~~~~----- 280 (407)
T 3rp8_A 221 FVGEGKQVSLMPVSAGRFYFFFDVPLPAG---LAEDRDTLRADLSRYFA-GWAPP-----------VQKLIAALD----- 280 (407)
T ss_dssp EEETTEEEEEEEETTTEEEEEEEEECCTT---CSCCTTTHHHHHHHHTT-TCCHH-----------HHHHHHHSC-----
T ss_pred EECCCcEEEEEEcCCCeEEEEEEeCCCcC---CCCCchhHHHHHHHHhc-CCChH-----------HHHHHHcCC-----
Confidence 44688999999999998877776653321 22344566667766554 33321 111111100
Q ss_pred cccCCCceeeeccceeeeecccccccccccCcEEEEcccccccCCcccccchhhhHHHHHHHHHHHHhhhcCCCcchHHH
Q 010225 363 CFEVPPRVVKLASERMVFPLSLKHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASL 442 (514)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~LvGDAAh~~~P~~GqG~~~al~da~~La~~l~~~~~~~~~~~~~~~ 442 (514)
+... .....+++.. ..+|..+||+|+|||||.++|++|||+|+||+||..|+++|... + ....+
T Consensus 281 ----~~~~----~~~~~~~~~~--~~~~~~~rv~LvGDAAh~~~P~~GqG~~~al~da~~La~~L~~~---~---~~~~~ 344 (407)
T 3rp8_A 281 ----PQTT----NRIEIHDIEP--FSRLVRGRVALLGDAGHSTTPDIGQGGCAAMEDAVVLGAVFRQT---R---DIAAA 344 (407)
T ss_dssp ----GGGC----EEEEEEECCC--CSCCEETTEEECGGGTCCCCGGGSCHHHHHHHHHHHHHHHHHSC---C---CHHHH
T ss_pred ----ccce----eEEeeEecCC--CCceecCCEEEEEcccccCCcchhhhHHHHHHHHHHHHHHHhcC---C---CHHHH
Confidence 0000 0122244432 37788999999999999999999999999999999999999863 2 34889
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHhccChhHHHHHHH
Q 010225 443 LKKYEAERKPANIVMMAVLDGFQKAYSVDFGPLNILRAAAFHGAQYISPLKRNIIS 498 (514)
Q Consensus 443 l~~Y~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~ 498 (514)
|+.|+++|++++..++..++.+.++++..+++...+|+..|.... .+.+.+.+..
T Consensus 345 l~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~~R~~~l~~~~-~~~~~~~~~~ 399 (407)
T 3rp8_A 345 LREYEAQRCDRVRDLVLKARKRCDITHGKDMQLTEAWYQELREET-GERIINGMCD 399 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHSCC-SHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhcCCHHHHHHHHHHHhhcc-HHHHHHhhhh
Confidence 999999999999999999999999999999999999999998655 3344444443
No 6
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=100.00 E-value=1.4e-40 Score=339.70 Aligned_cols=376 Identities=15% Similarity=0.112 Sum_probs=269.3
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhhh
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (514)
++||+||||||+|+++|+.|++. |++|+||||.+.+.. ....++..+++++.++|+++|+++.+....
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~----G~~v~v~E~~~~~~~--------~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~ 69 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKA----GIDNVILERQTPDYV--------LGRIRAGVLEQGMVDLLREAGVDRRMARDG 69 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHH----TCCEEEECSSCHHHH--------HTCCCCCEECHHHHHHHHHTTCCHHHHHHC
T ss_pred CccEEEECCCHHHHHHHHHHHHC----CCCEEEEeCCCCCcc--------cCCCceEeECHHHHHHHHHcCCcHHHHhcC
Confidence 57999999999999999999996 999999999875200 011223469999999999999999988755
Q ss_pred ccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCc
Q 010225 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (514)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~ 214 (514)
. +...+.++.........+.. ......++.+++..+.+.|.+.+.+.+ ++|+++++|++++.
T Consensus 70 ~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~g-~~i~~~~~v~~i~~-------------- 131 (394)
T 1k0i_A 70 L-VHEGVEIAFAGQRRRIDLKR--LSGGKTVTVYGQTEVTRDLMEAREACG-ATTVYQAAEVRLHD-------------- 131 (394)
T ss_dssp E-EESCEEEEETTEEEEECHHH--HHTSCCEEECCHHHHHHHHHHHHHHTT-CEEESSCEEEEEEC--------------
T ss_pred C-ccceEEEEECCceEEecccc--ccCCCceEEechHHHHHHHHHHHHhcC-CeEEeceeEEEEEE--------------
Confidence 5 45666666543322222211 111335678899999999999998876 99999999999976
Q ss_pred cccccccCCeeEEEe-CCCc--EEEeeE-EEecCCCchhhhhhCCCccCCCCCc---eEEEEEEEe-cCCCcceEEEecC
Q 010225 215 ATTLFTKGHLAKLDL-SDGT--SLYAKL-VGADGGKSRVRELAGFKTTGWSYSQ---NAIICTVEH-NKENYCAWQRFLP 286 (514)
Q Consensus 215 ~~~~~~~~~~~~v~~-~~g~--~~~ad~-V~AdG~~S~vR~~l~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~ 286 (514)
++++.+.|++ .+|+ +++||+ |+|||.+|.+|+.++..... .+.. ..+...+.. +......+....+
T Consensus 132 -----~~~~~~~v~~~~~g~~~~~~a~~vV~AdG~~S~vr~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (394)
T 1k0i_A 132 -----LQGERPYVTFERDGERLRLDCDYIAGCDGFHGISRQSIPAERLK-VFERVYPFGWLGLLADTPPVSHELIYANHP 205 (394)
T ss_dssp -----TTSSSCEEEEEETTEEEEEECSEEEECCCTTCSTGGGSCGGGCE-EEEEEEEEEEEEEEESSCCSCSSCEEECCT
T ss_pred -----ecCCceEEEEecCCcEEEEEeCEEEECCCCCcHHHHhcCccccc-cccccccceeEEEecCCCCCccceEEEEcC
Confidence 1124566777 6887 799999 99999999999998754221 1111 112222221 1111222222346
Q ss_pred CCceEEeecCCCceEEEEEcCccchHHhhCCCHHHHHHHHHHhhcCCCCCCCCCCCCCccccccccccCccccccccccC
Q 010225 287 AGPIALLPIGDNFSNIVWTMNPKDASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEV 366 (514)
Q Consensus 287 ~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (514)
.++.++.|.+++..++++...... .....+.+.+.+.+.+.+. .+ ..+.+.. .
T Consensus 206 ~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~-~~--------------~~~~~~~----------~ 258 (394)
T 1k0i_A 206 RGFALCSQRSATRSQYYVQVPLSE--KVEDWSDERFWTELKARLP-SE--------------VAEKLVT----------G 258 (394)
T ss_dssp TCCEEEEEEETTEEEEEEEECTTC--CGGGCCHHHHHHHHHHTSC-HH--------------HHHHCCC----------C
T ss_pred CceEEEEecCCCcEEEEEEeCCCC--CccccCHHHHHHHHHHhhC-cc--------------ccccccc----------C
Confidence 677777676667777777665432 2233566777777776443 00 0000000 0
Q ss_pred CCceeeeccceeeeecccccccccccCcEEEEcccccccCCcccccchhhhHHHHHHHHHHHHhhhcCCCcchHHHHHHH
Q 010225 367 PPRVVKLASERMVFPLSLKHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKY 446 (514)
Q Consensus 367 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~LvGDAAh~~~P~~GqG~~~al~da~~La~~l~~~~~~~~~~~~~~~l~~Y 446 (514)
+ . .....+|+......+|..+||+|+|||||.++|+.|||+|+||+||..|+++|...++.+. ..+|+.|
T Consensus 259 -~-~----~~~~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~GqG~~~ai~da~~La~~L~~~~~~~~----~~~L~~Y 328 (394)
T 1k0i_A 259 -P-S----LEKSIAPLRSFVVEPMQHGRLFLAGDAAHIVPPTGAKGLNLAASDVSTLYRLLLKAYREGR----GELLERY 328 (394)
T ss_dssp -C-E----EEEEEEEEEEEEEECSEETTEEECGGGTEECCGGGTCHHHHHHHHHHHHHHHHHHHHHHCC----GGGGGGH
T ss_pred -c-c----eeeEEEEhhhhhccccccCCEEEEechhhcCCCcccchHHHHHHHHHHHHHHHHHHhccCc----hHHHHHH
Confidence 0 0 0123466666667788899999999999999999999999999999999999998875431 5689999
Q ss_pred HHHhhHHHHHHHHHHHHHHHhhc---CCCchHHHHHHHHHHHhccChhHHHHHHHHhhcC
Q 010225 447 EAERKPANIVMMAVLDGFQKAYS---VDFGPLNILRAAAFHGAQYISPLKRNIISYASGE 503 (514)
Q Consensus 447 ~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~g~ 503 (514)
+++|++++..++..++.+..+++ ..+++...+|+..|..+...|.+++.+++..+|.
T Consensus 329 ~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~g~ 388 (394)
T 1k0i_A 329 SAICLRRIWKAERFSWWMTSVLHRFPDTDAFSQRIQQTELEYYLGSEAGLATIAENYVGL 388 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCCTTCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcCCHHHHHHHHHHhcCC
Confidence 99999999999999988877776 3457888999999999999999999999999997
No 7
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=100.00 E-value=3.1e-40 Score=356.73 Aligned_cols=354 Identities=19% Similarity=0.259 Sum_probs=261.1
Q ss_pred CccEEEECCCHHHHHHHHHhcc-----CCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHH
Q 010225 55 QYDVAVVGGGMVGMALACSLAS-----MPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQY 129 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~-----~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~ 129 (514)
++||+||||||+||++|+.|++ . |++|+||||.+.+ ...+++..++++++++|+++|+++.
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~----Gi~v~viE~~~~~----------~~~gra~~l~~~tle~l~~lGl~~~ 73 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKP----DLKVRIIDKRSTK----------VYNGQADGLQCRTLESLKNLGLADK 73 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHST----TCCEEEECSSSSC----------CCSCSCCEECHHHHHHHHTTTCHHH
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccC----CCCEEEEeCCCCC----------CCCCceeEEChHHHHHHHHCCCHHH
Confidence 5899999999999999999999 8 9999999998765 3467789999999999999999999
Q ss_pred HHhhhccCcceEEEEeCCCcceee----eccCC-CCCcccEEEEehHHHHHHHHHHHhcCC--CceEEcCCeeEEEeeCC
Q 010225 130 VQQHRHAYFDKMQVWDYTGLGYTK----YNARD-VNKEILGCVVENKVLHSSLLSCMQNTE--FQKTIYPSRLTSMALLP 202 (514)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~i~r~~l~~~L~~~~~~~g--~v~v~~~~~v~~v~~~~ 202 (514)
+..... ++..+.+|+......+. +.... .......+.++|..+.+.|.+.+.+.+ +++|+++++|++++.++
T Consensus 74 l~~~~~-~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~ 152 (665)
T 1pn0_A 74 ILSEAN-DMSTIALYNPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDS 152 (665)
T ss_dssp HHTTCB-CCCEEEEEEECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECG
T ss_pred HHHhcc-ccceEEEEeCCCCcceEeecccCcccCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecC
Confidence 987665 67788888755332221 21111 112334578999999999999998865 58999999999998721
Q ss_pred CCCCcccCCCCccccccccCCeeEEEeC------------------------------------------CC--cEEEee
Q 010225 203 SSSSISVDSTPSATTLFTKGHLAKLDLS------------------------------------------DG--TSLYAK 238 (514)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~------------------------------------------~g--~~~~ad 238 (514)
... .+. ++..+++++. +| ++++||
T Consensus 153 ~~~-----~~~-------~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G~~~~i~A~ 220 (665)
T 1pn0_A 153 SKA-----EDP-------EAYPVTMTLRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGEIETVHCK 220 (665)
T ss_dssp GGT-----TCT-------TCCCEEEEEEECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTTCEEEEEEE
T ss_pred ccc-----ccC-------CCCCEEEEEEecccccccccccccccccccccccccccccccccccccccCCCCceEEEEeC
Confidence 000 000 1134555442 45 479999
Q ss_pred E-EEecCCCchhhhhhCCCccCCCCCceEEEEEEEe--cCCC-cceEEE-ecCCCceEEeecCCCceEEEEEcCccch--
Q 010225 239 L-VGADGGKSRVRELAGFKTTGWSYSQNAIICTVEH--NKEN-YCAWQR-FLPAGPIALLPIGDNFSNIVWTMNPKDA-- 311 (514)
Q Consensus 239 ~-V~AdG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~-~~~~g~~~~~p~~~~~~~~~~~~~~~~~-- 311 (514)
+ |+|||++|.||++++....+..+...+....+.. +.+. ...... ..+.|+++++|.+++..++++..+....
T Consensus 221 ~VVGADG~~S~VR~~lg~~~~g~~~~~~~~v~d~~~~~~~p~~~~~~~~~~~~~g~~~~~P~~~~~~r~~~~~~~~~~~~ 300 (665)
T 1pn0_A 221 YVIGCDGGHSWVRRTLGFEMIGEQTDYIWGVLDAVPASNFPDIRSRCAIHSAESGSIMIIPRENNLVRFYVQLQARAEKG 300 (665)
T ss_dssp EEEECCCTTCHHHHHHTCCCEEEEEEEEEEEEEEEEECCCTTTTSEEEEECSSSCEEEEEECSTTCEEEEEEECC-----
T ss_pred EEEeccCCCCHHHHhcCCCCCCCCccEEEEEEEEEECCCCCCcceEEEEEeCCCceEEEEEcCCCEEEEEEEeCCccccc
Confidence 9 9999999999999998877666554443333322 2222 112222 2367999999999998888887765431
Q ss_pred --HHhhCCCHHHHHHHHHHhhcCCCCCCCCCCCCCccccccccccCccccccccccCCCceeeeccceeeeecccccccc
Q 010225 312 --SDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVVKLASERMVFPLSLKHANN 389 (514)
Q Consensus 312 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 389 (514)
......+.+.+.+.+.+.+. .|.. .+ ....+...|++..+.+++
T Consensus 301 ~~~~~~~~t~e~~~~~~~~~~~-~~~~--------------------------------~~-~~~~~~~~~~~~~r~a~~ 346 (665)
T 1pn0_A 301 GRVDRTKFTPEVVIANAKKIFH-PYTF--------------------------------DV-QQLDWFTAYHIGQRVTEK 346 (665)
T ss_dssp -----CCCCHHHHHHHHHHHHT-TSCC--------------------------------EE-EEEEEEEEEEEEEEECSC
T ss_pred cccCcCCCCHHHHHHHHHHHhC-cccC--------------------------------ce-eeEEEEEeeeccceehhh
Confidence 12344677888888877553 1100 01 122334467887788899
Q ss_pred cc-cCcEEEEcccccccCCcccccchhhhHHHHHHHHHHHHhhhcCCCcchHHHHHHHHHHhhHHHHHHHHHHHHHHHhh
Q 010225 390 YV-SKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKYEAERKPANIVMMAVLDGFQKAY 468 (514)
Q Consensus 390 ~~-~~~v~LvGDAAh~~~P~~GqG~~~al~da~~La~~l~~~~~~~~~~~~~~~l~~Y~~~r~~~~~~~~~~~~~~~~~~ 468 (514)
|. .+||+|+|||||.++|+.|||+|+||+||.+|+++|..+++.. +...+|+.|+++|++++..++..++.+.++|
T Consensus 347 ~~~~gRV~L~GDAAH~~~P~~GqG~N~gi~DA~nLawkLa~vl~g~---a~~~lL~tYe~eR~p~a~~~i~~s~~~~~l~ 423 (665)
T 1pn0_A 347 FSKDERVFIAGDACHTHSPKAGQGMNTSMMDTYNLGWKLGLVLTGR---AKRDILKTYEEERQPFAQALIDFDHQFSRLF 423 (665)
T ss_dssp SEETTTEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHHTTC---BCGGGGHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEECccccCCCcccCCcchhHHHHHHHHHHHHHHHcCC---CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 98 7999999999999999999999999999999999999988632 3478999999999999999999999999999
Q ss_pred cCCC
Q 010225 469 SVDF 472 (514)
Q Consensus 469 ~~~~ 472 (514)
+...
T Consensus 424 ~~~~ 427 (665)
T 1pn0_A 424 SGRP 427 (665)
T ss_dssp HSCB
T ss_pred cCCC
Confidence 7653
No 8
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=100.00 E-value=7e-40 Score=347.61 Aligned_cols=344 Identities=22% Similarity=0.259 Sum_probs=258.1
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHh
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQ 132 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~ 132 (514)
+.++||+||||||+||++|+.|+++ |++|+||||++.. ...+++..++++++++|+++|+++.+..
T Consensus 3 ~~~~dVlIVGaG~aGl~~A~~La~~----G~~v~viEr~~~~----------~~~~~~~~l~~~~~~~l~~lGl~~~~~~ 68 (535)
T 3ihg_A 3 DHEVDVLVVGAGLGGLSTAMFLARQ----GVRVLVVERRPGL----------SPYPRAAGQNPRTMELLRIGGVADEVVR 68 (535)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHTT----TCCEEEECSSSSC----------CCCCCSCCBCHHHHHHHHHTTCHHHHHH
T ss_pred CccCcEEEECcCHHHHHHHHHHHHC----CCCEEEEeCCCCC----------CCCCccceECHHHHHHHHHcCCHHHHHh
Confidence 4578999999999999999999996 9999999999876 3456678899999999999999999988
Q ss_pred hhccCcc--eEE--EE-eCCCccee----eeccC----CCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEe
Q 010225 133 HRHAYFD--KMQ--VW-DYTGLGYT----KYNAR----DVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMA 199 (514)
Q Consensus 133 ~~~~~~~--~~~--~~-~~~~~~~~----~~~~~----~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~ 199 (514)
....... .+. .+ ...+.... .++.. ........+.+++..|...|.+.+++.| ++|+++++|++++
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~g-v~i~~~~~v~~i~ 147 (535)
T 3ihg_A 69 ADDIRGTQGDFVIRLAESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHG-GAIRFGTRLLSFR 147 (535)
T ss_dssp SCCSSCTTSCCEEEEESSSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTT-CEEESSCEEEEEE
T ss_pred hCCCcccccceeeeEEeccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCC-CEEEeCCEEEEEE
Confidence 6652211 111 11 22221111 11110 0001223567899999999999999986 9999999999998
Q ss_pred eCCCCCCcccCCCCccccccccCC----eeEEEeCCC---cEEEeeE-EEecCCCchhhhhhCCCccCCCCCceEEEEEE
Q 010225 200 LLPSSSSISVDSTPSATTLFTKGH----LAKLDLSDG---TSLYAKL-VGADGGKSRVRELAGFKTTGWSYSQNAIICTV 271 (514)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~g---~~~~ad~-V~AdG~~S~vR~~l~~~~~~~~~~~~~~~~~~ 271 (514)
+ +++ .+++.+.++ .+++||+ |+|||.+|.+|+++|+...+..+....+...+
T Consensus 148 ~--------------------~~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~S~vR~~lgi~~~~~~~~~~~~~~~~ 207 (535)
T 3ihg_A 148 Q--------------------HDDDAGAGVTARLAGPDGEYDLRAGYLVGADGNRSLVRESLGIGRYGHGTLTHMVGVIF 207 (535)
T ss_dssp E--------------------ECGGGCSEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHTTCCEEEEEEEEEEEEEEE
T ss_pred E--------------------CCCCccccEEEEEEcCCCeEEEEeCEEEECCCCcchHHHHcCCCcCCCCccceEEEEEE
Confidence 7 233 777887776 6899999 99999999999999988776665444444444
Q ss_pred EecCCC-----c-ceEEEecCCCceEEeecCC-CceEEEEEcCccchHHhhCCCHHHHHHHHHHhhcCCCCCCCCCCCCC
Q 010225 272 EHNKEN-----Y-CAWQRFLPAGPIALLPIGD-NFSNIVWTMNPKDASDCKSMNEDDFVKILNHALDYGYGPHPKSISSG 344 (514)
Q Consensus 272 ~~~~~~-----~-~~~~~~~~~g~~~~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (514)
..+.+. . ..+..+.+.++.+++|.++ +.+.+.|...++........+.+.+.+.+.+.+....
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~l~~~~~~~~---------- 277 (535)
T 3ihg_A 208 DADLSGIMEPGTTGWYYLHHPEFKGTFGPTDRPDRHTLFVEYDPDEGERPEDFTPQRCVELIGLALDAPE---------- 277 (535)
T ss_dssp ECCGGGTSCTTCCEEEEEECSSCEEEEEECSSTTEEEEEEEECTTTTCCGGGCCHHHHHHHHHHHHTCSS----------
T ss_pred eccChhhccCCceEEEEEECCCceEEEEEecCCCEEEEEEeeCccccCccccCCHHHHHHHHHHHhCCCC----------
Confidence 443221 1 2233445778889999987 6777777776654444455778888888887654100
Q ss_pred ccccccccccCccccccccccCCCceeeeccceeeeecccccccccccCcEEEEcccccccCCcccccchhhhHHHHHHH
Q 010225 345 SVDMFSWFRGDATLSAKECFEVPPRVVKLASERMVFPLSLKHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLS 424 (514)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~LvGDAAh~~~P~~GqG~~~al~da~~La 424 (514)
.+. ++ .....|++....+.+|..+||+|+|||||.++|+.|||+|+||+||.+|+
T Consensus 278 ---------------------~~~---~~-~~~~~~~~~~~~a~~~~~grv~LvGDAAH~~~P~~GqG~n~ai~DA~~La 332 (535)
T 3ihg_A 278 ---------------------VKP---EL-VDIQGWEMAARIAERWREGRVFLAGDAAKVTPPTGGMSGNAAVADGFDLA 332 (535)
T ss_dssp ---------------------CCC---EE-EEEEEEEEEEEEESCSEETTEEECTTTTEECCSTTSCHHHHHHHHHHHHH
T ss_pred ---------------------Cce---eE-EEeeEeeeeEEEECccccCCEEEEecccccCCCccCCccccccccHHHHH
Confidence 001 11 12345888888889999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCCcchHHHHHHHHHHhhHHHHHHHHHHHHHHHhhc
Q 010225 425 RIIAEGIAVGADIGEASLLKKYEAERKPANIVMMAVLDGFQKAYS 469 (514)
Q Consensus 425 ~~l~~~~~~~~~~~~~~~l~~Y~~~r~~~~~~~~~~~~~~~~~~~ 469 (514)
++|..+++.. +...+|+.|+++|++++..++..+....+.+.
T Consensus 333 ~~La~~l~g~---~~~~lL~~Ye~eR~p~a~~~~~~s~~~~~~~~ 374 (535)
T 3ihg_A 333 WKLAAVLQGQ---AGAGLLDTYEDERKVAAELVVAEALAIYAQRM 374 (535)
T ss_dssp HHHHHHHTTS---SCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhcCC---CcHHHHHhhHHHHHHHHHHHHHHHHHhhHhhc
Confidence 9999988643 23679999999999999999999988887664
No 9
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=100.00 E-value=7.3e-40 Score=335.79 Aligned_cols=362 Identities=16% Similarity=0.176 Sum_probs=231.3
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhhhc
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRH 135 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~~ 135 (514)
++|+||||||+||++|+.|+++ |++|+||||++.+.. ...+.++.++++++++|+++|+.+.+.....
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~----G~~v~v~Er~~~~~~--------~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~ 69 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKH----GIKVTIYERNSAASS--------ILPGYGIHINSFGKQALQECLPAENWLAFEE 69 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSCSSCS--------SCCCCEEEECHHHHHHHHHHSCHHHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhC----CCCEEEEecCCCCCc--------CCCceEEeeCHHHHHHHHHcCChHHHHHhhh
Confidence 5799999999999999999996 999999999987632 2235578899999999999998877654221
Q ss_pred ---cCcceEEEEeCCCcceeeec-cC---CCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcc
Q 010225 136 ---AYFDKMQVWDYTGLGYTKYN-AR---DVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSIS 208 (514)
Q Consensus 136 ---~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~ 208 (514)
.......+++.......... .. ........+.++|..|.+.|.+.+ + .+|+++++|++++.
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~---~-~~v~~~~~v~~~~~-------- 137 (412)
T 4hb9_A 70 ASRYIGGQSRFYNERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGL---A-NTIQWNKTFVRYEH-------- 137 (412)
T ss_dssp HCEEECCCCEEECTTSCEEEC--------------CEEEEEHHHHHHHHHTTC---T-TTEECSCCEEEEEE--------
T ss_pred hhcccCcceeEecCCcceecccCCccccccccccccceEeeHHHHHHHHHhhc---c-ceEEEEEEEEeeeE--------
Confidence 11122223332221111100 00 001122346799999999998766 3 46899999999986
Q ss_pred cCCCCccccccccCCeeEEEeCCCcEEEeeE-EEecCCCchhhhhhCCCccCCCCCceEEEEEEEecCCC-cceEEEecC
Q 010225 209 VDSTPSATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKSRVRELAGFKTTGWSYSQNAIICTVEHNKEN-YCAWQRFLP 286 (514)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 286 (514)
.+++.++|++.||++++||+ |+|||.+|.||+.++.......++...+.+........ ......+..
T Consensus 138 -----------~~~~~v~v~~~dG~~~~adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (412)
T 4hb9_A 138 -----------IENGGIKIFFADGSHENVDVLVGADGSNSKVRKQYLPFIERFDVGVSMIIGRARLTPALTALLPQNFRD 206 (412)
T ss_dssp -----------CTTSCEEEEETTSCEEEESEEEECCCTTCHHHHHHSTTCCCEEEEEEEEEEEEECCHHHHHHSCGGGTS
T ss_pred -----------cCCCeEEEEECCCCEEEeeEEEECCCCCcchHHHhCCCccccccceeEEEEEEecchhhhcchhhhhcc
Confidence 13356899999999999999 99999999999999887777777777777776654221 000011111
Q ss_pred CCceEEee----------------------cCCCceEEEEEc---CccchHHhhCCCHHHHHHHHHHhhcCCCCCCCCCC
Q 010225 287 AGPIALLP----------------------IGDNFSNIVWTM---NPKDASDCKSMNEDDFVKILNHALDYGYGPHPKSI 341 (514)
Q Consensus 287 ~g~~~~~p----------------------~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (514)
..+..++| .......+.|.. ...........+.+.+.+.+.+.+. +|.+..
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~--- 282 (412)
T 4hb9_A 207 GTPNSIVPKSPDWLFISMWRAPVNIHVEASLAEIDNFIVWVYVAATDSLPDNITDFSAEALCDLVQSRMI-SWDPSL--- 282 (412)
T ss_dssp SCCEEECCSSSEEEEEEEEEEESCTTSCGGGCCEEEEEEEEEEEEGGGSCTTGGGCCHHHHHHHHHHHTT-TSCHHH---
T ss_pred CCcceEeecCCCcceeeeeecCCceeEEEeccCCCceEEEEEecccccccccccccchHHHHHHHHHHhc-cCChHH---
Confidence 11111111 111111222222 1112223345667778888877665 554331
Q ss_pred CCCccccccccccCccccccccccCCCceeeeccceeeeeccc-ccccccccCcEEEEcccccccCCcccccchhhhHHH
Q 010225 342 SSGSVDMFSWFRGDATLSAKECFEVPPRVVKLASERMVFPLSL-KHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDA 420 (514)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~~v~LvGDAAh~~~P~~GqG~~~al~da 420 (514)
.+.+.. .. ......+.+.. .+..+|..|||+|+|||||.++|+.|||+|+||+||
T Consensus 283 ----~~li~~----~~----------------~~~~~~~~~~~~~~~~~~~~grv~LiGDAAH~~~P~~GqG~n~ai~DA 338 (412)
T 4hb9_A 283 ----HTLVQQ----SD----------------MENISPLHLRSMPHLLPWKSSTVTLLGDAIHNMTPMTGSGANTALRDA 338 (412)
T ss_dssp ----HHHHHT----SC----------------TTCCEEEEEEECCCCCCCCCCSEEECTHHHHCSSCCSSSHHHHHHHHH
T ss_pred ----HHHHHh----cc----------------cceeccchhccccccccccccCEEEEEcccccCCCchhhHHHHHHHHH
Confidence 111111 00 00011122221 235678899999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcCCCcchHHHHHHHHHHhhHHHHHHHHHHHHHHH--hhcCCCchHHHHHHHHH
Q 010225 421 STLSRIIAEGIAVGADIGEASLLKKYEAERKPANIVMMAVLDGFQK--AYSVDFGPLNILRAAAF 483 (514)
Q Consensus 421 ~~La~~l~~~~~~~~~~~~~~~l~~Y~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~~r~~~l 483 (514)
..|+++|..+.+...++ ..+|+.|+++|++++..++..+..... +++...++. ..|+..+
T Consensus 339 ~~La~~L~~~~~~~~~~--~~aL~~Ye~~R~~~~~~~~~~s~~~~~~~~~~~~~~~~-~~r~~~~ 400 (412)
T 4hb9_A 339 LLLTQKLASVASGHEEL--VKAISDYEQQMRAYANEIVGISLRSAQNAVIHFSIPPL-KQRHLSI 400 (412)
T ss_dssp HHHHHHHHHHHTTSSCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-----------
T ss_pred HHHHHHHHHHhcCCcCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchH-HHHHHHH
Confidence 99999999988766554 789999999999999999998876654 344444433 3454444
No 10
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=100.00 E-value=1.8e-38 Score=342.40 Aligned_cols=352 Identities=20% Similarity=0.293 Sum_probs=251.3
Q ss_pred CCCccEEEECCCHHHHHHHHHhcc-CCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHH
Q 010225 53 DDQYDVAVVGGGMVGMALACSLAS-MPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQ 131 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~-~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~ 131 (514)
+.++||+||||||+||++|+.|++ . |++|+||||.+.+ ...+++..++++++++|+++|+++.+.
T Consensus 30 ~~~~dVlIVGaGpaGL~~A~~La~~~----G~~V~viEr~~~~----------~~~g~a~~l~~~t~e~l~~lGl~~~~~ 95 (639)
T 2dkh_A 30 PSQVDVLIVGCGPAGLTLAAQLAAFP----DIRTCIVEQKEGP----------MELGQADGIACRTMEMFEAFEFADSIL 95 (639)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHTTCT----TSCEEEECSSSSC----------CSSCSCCEECHHHHHHHHHTTCHHHHH
T ss_pred CCCCcEEEECcCHHHHHHHHHHHHhC----CCCEEEEeCCCCC----------CCCCceeeeCHHHHHHHHHcCcHHHHH
Confidence 356899999999999999999999 8 9999999999866 345678899999999999999999988
Q ss_pred hhhccCcceEEEEeCCC--ccee----eeccCC-CCCcccEEEEehHHHHHHHHHHHhcCC-CceEEcCCeeEEEeeCCC
Q 010225 132 QHRHAYFDKMQVWDYTG--LGYT----KYNARD-VNKEILGCVVENKVLHSSLLSCMQNTE-FQKTIYPSRLTSMALLPS 203 (514)
Q Consensus 132 ~~~~~~~~~~~~~~~~~--~~~~----~~~~~~-~~~~~~~~~i~r~~l~~~L~~~~~~~g-~v~v~~~~~v~~v~~~~~ 203 (514)
.... ....+.+|+... ...+ .+.... .......+.+++..+.+.|.+.+++.| +++|+++++|+++++
T Consensus 96 ~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~--- 171 (639)
T 2dkh_A 96 KEAC-WINDVTFWKPDPGQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKV--- 171 (639)
T ss_dssp HHSE-EECEEEEEEECTTSTTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEE---
T ss_pred Hhcc-cccceEEECCCCCCCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEE---
Confidence 7665 456677776321 1111 111111 112344578999999999999999988 459999999999987
Q ss_pred CCCcccCCCCccccccccCCeeEEEeC------CC--cEEEeeE-EEecCCCchhhhhhCCCccCCCCCceEEEEEEEe-
Q 010225 204 SSSISVDSTPSATTLFTKGHLAKLDLS------DG--TSLYAKL-VGADGGKSRVRELAGFKTTGWSYSQNAIICTVEH- 273 (514)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~v~~~------~g--~~~~ad~-V~AdG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~- 273 (514)
+.+. .+..++|++. +| .+++||+ |+|||.+|.||++++....+..+...+....+..
T Consensus 172 ------~~~~-------~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~~~~~~~~~ 238 (639)
T 2dkh_A 172 ------DHGA-------ADYPVTVTLERCDAAHAGQIETVQARYVVGCDGARSNVRRAIGRQLVGDSANQAWGVMDVLAV 238 (639)
T ss_dssp ------CTTC-------SSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTCHHHHHTTCCCEECSCSCCEEEEEEEEE
T ss_pred ------CCCC-------CcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcchHHHHHhCCCCCCCCccceEEEEEEEEc
Confidence 1110 1135666654 46 4799999 9999999999999998877666555444433322
Q ss_pred -cCCC-cceEEEecCCCceEEeecCCC-ceEEEEEcCcc--c-hHHhhCCCHHHHHHHHHHhhcCCCCCCCCCCCCCccc
Q 010225 274 -NKEN-YCAWQRFLPAGPIALLPIGDN-FSNIVWTMNPK--D-ASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVD 347 (514)
Q Consensus 274 -~~~~-~~~~~~~~~~g~~~~~p~~~~-~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (514)
+.+. ........+.|+++++|.+++ ..++++..... . .......+.+.+.+.+.+.+. .+..
T Consensus 239 ~~~p~~~~~~~~~~~~g~~~~~P~~~~~~~r~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~-~~~~----------- 306 (639)
T 2dkh_A 239 TDFPDVRYKVAIQSEQGNVLIIPREGGHLVRFYVEMDKLDADERVASRNITVEQLIATAQRVLH-PYKL----------- 306 (639)
T ss_dssp ECCTTTTSEEEEEETTEEEEEEECTTSSCEEEEEECC-----------CCCHHHHHHHHHHHHT-TSCE-----------
T ss_pred cCCCccceeEEEEcCCceEEEEEcCCCcEEEEEEECCCcCcccccccCCCCHHHHHHHHHHHhC-cccC-----------
Confidence 2222 111211227889999999888 77888876541 1 112334677788777766443 0000
Q ss_pred cccccccCccccccccccCCCceeeeccceeeeecccccccccc------------cCcEEEEcccccccCCcccccchh
Q 010225 348 MFSWFRGDATLSAKECFEVPPRVVKLASERMVFPLSLKHANNYV------------SKRVVLIGDAAHTVHPLAGQGVNL 415 (514)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~------------~~~v~LvGDAAh~~~P~~GqG~~~ 415 (514)
.+ ....+...|++..+.+.+|. .+||+|+|||||.++|+.|||+|+
T Consensus 307 ---------------------~~-~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~gRV~L~GDAAH~~~P~~GqG~n~ 364 (639)
T 2dkh_A 307 ---------------------EV-KNVPWWSVYEIGQRICAKYDDVVDAVATPDSPLPRVFIAGDACHTHSPKAGQGMNF 364 (639)
T ss_dssp ---------------------EE-EEEEEEEEECCCCEECSCSBSCCCSSCCTTSCCCCEEECGGGTEECCGGGCCTTHH
T ss_pred ---------------------cc-eeeeEEEecccccchhhhhhccccccccccCccCcEEEEecccccCCCcccccchh
Confidence 00 11123334666666677776 899999999999999999999999
Q ss_pred hhHHHHHHHHHHHHhhhcCCCcchHHHHHHHHHHhhHHHHHHHHHHHHHHHhhcCCC
Q 010225 416 GFGDASTLSRIIAEGIAVGADIGEASLLKKYEAERKPANIVMMAVLDGFQKAYSVDF 472 (514)
Q Consensus 416 al~da~~La~~l~~~~~~~~~~~~~~~l~~Y~~~r~~~~~~~~~~~~~~~~~~~~~~ 472 (514)
||+||.+|+++|..+++.. +...+|+.|+++|++++..++..++.+.++|+...
T Consensus 365 ai~DA~nLawkLa~vl~g~---a~~~lL~~Ye~eR~~~a~~~~~~s~~~~~~~~~~~ 418 (639)
T 2dkh_A 365 SMQDSFNLGWKLAAVLRKQ---CAPELLHTYSSERQVVAQQLIDFDREWAKMFSDPA 418 (639)
T ss_dssp HHHHHHHHHHHHHHHHTTS---BCGGGGHHHHHHHHHHHHHHHHHHHHSCC------
T ss_pred hHHHHHHHHHHHHHHHcCC---CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999988632 34679999999999999999999999999887653
No 11
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=100.00 E-value=1.5e-38 Score=337.63 Aligned_cols=353 Identities=21% Similarity=0.262 Sum_probs=248.7
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHh
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQ 132 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~ 132 (514)
+..+||+||||||+||++|+.|++. |++|+||||.+.+ ...+++..++++++++|+++|+++.+.+
T Consensus 24 ~~~~dVlIVGaGpaGl~~A~~La~~----G~~V~vlEr~~~~----------~~~~~~~~l~~~~~~~l~~lGl~~~~~~ 89 (549)
T 2r0c_A 24 PIETDVLILGGGPVGMALALDLAHR----QVGHLVVEQTDGT----------ITHPRVGTIGPRSMELFRRWGVAKQIRT 89 (549)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHT----TCCEEEECSSCSC----------CSSCCCCEECHHHHHHHHHTTCHHHHHT
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC----CCCEEEEeCCCCC----------CCCCceeeeCHHHHHHHHHcCChHHHHh
Confidence 4568999999999999999999996 9999999999866 3456678999999999999999999887
Q ss_pred hhccCcc--eEEEEe-CCCcceeeeccCCC-------CCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCC
Q 010225 133 HRHAYFD--KMQVWD-YTGLGYTKYNARDV-------NKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLP 202 (514)
Q Consensus 133 ~~~~~~~--~~~~~~-~~~~~~~~~~~~~~-------~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~ 202 (514)
....... ...++. ..+.....+..... .....++.+++..+.+.|.+.+.+. |+++++|+++++
T Consensus 90 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~----v~~~~~v~~~~~-- 163 (549)
T 2r0c_A 90 AGWPGDHPLDAAWVTRVGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER----LRTRSRLDSFEQ-- 163 (549)
T ss_dssp SSCCTTSBCCEEEESSBTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG----EECSEEEEEEEE--
T ss_pred hcCCcccccceEEeccCCCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh----cccCcEEEEEEE--
Confidence 6552211 122222 22222212221110 1223457899999999999999864 899999999987
Q ss_pred CCCCcccCCCCccccccccCCeeEEEeCC---C--cEEEeeE-EEecCCCchhhhhhCCCccCCCCCceEEEEEEEecCC
Q 010225 203 SSSSISVDSTPSATTLFTKGHLAKLDLSD---G--TSLYAKL-VGADGGKSRVRELAGFKTTGWSYSQNAIICTVEHNKE 276 (514)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~---g--~~~~ad~-V~AdG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~ 276 (514)
+++.+++++.+ | .+++||+ |+|||.+|.||+.++....+..+...++...++.+..
T Consensus 164 ------------------~~~~v~v~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~~~~~~~~~~~ 225 (549)
T 2r0c_A 164 ------------------RDDHVRATITDLRTGATRAVHARYLVACDGASSPTRKALGIDAPPRHRTQVFRNILFRAPEL 225 (549)
T ss_dssp ------------------CSSCEEEEEEETTTCCEEEEEEEEEEECCCTTCHHHHHHTCCCCBSSCCEEEEEEEEECTTH
T ss_pred ------------------eCCEEEEEEEECCCCCEEEEEeCEEEECCCCCcHHHHHcCCCCCCCcccceEEEEEEECCch
Confidence 33556776654 6 4799999 9999999999999998888777666666666665411
Q ss_pred ------Cc-ceEEEecCC-CceEEeecCCC-ceEEEEEcCccchHHhhCCCHHHHHHHHHHhhcCCCCCCCCCCCCCccc
Q 010225 277 ------NY-CAWQRFLPA-GPIALLPIGDN-FSNIVWTMNPKDASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVD 347 (514)
Q Consensus 277 ------~~-~~~~~~~~~-g~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (514)
.. ..+..+.++ ++++++|.+++ .+.+.+ +... + . .+.+.+.+.+.+.+.. .
T Consensus 226 ~~~~~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~--~~~~-~--~-~~~~~~~~~l~~~~~~----~---------- 285 (549)
T 2r0c_A 226 RSLLGERAALFFFLMLSSSLRFPLRALDGRGLYRLTV--GVDD-A--S-KSTMDSFELVRRAVAF----D---------- 285 (549)
T ss_dssp HHHHGGGCCSEEEEEEETTEEEEEEESSSSSEEEEEE--ECST-T--C-CSCCCHHHHHHHHBCS----C----------
T ss_pred HHhcCCCCceEEEEECCCCcEEEEEEECCCcEEEEEe--cCCC-C--C-CCHHHHHHHHHHHhCC----C----------
Confidence 11 222333566 67899999764 343333 2211 1 1 4556667777664430 0
Q ss_pred cccccccCccccccccccCCCceeeeccceeeeecccccccccccCcEEEEcccccccCCcccccchhhhHHHHHHHHHH
Q 010225 348 MFSWFRGDATLSAKECFEVPPRVVKLASERMVFPLSLKHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRII 427 (514)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~LvGDAAh~~~P~~GqG~~~al~da~~La~~l 427 (514)
++..+. +...|++..+.+++|..+||+|+|||||.++|+.|||+|+||+||.+|+++|
T Consensus 286 ------------------~~~~~~----~~~~~~~~~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~L 343 (549)
T 2r0c_A 286 ------------------TEIEVL----SDSEWHLTHRVADSFSAGRVFLTGDAAHTLSPSGGFGMNTGIGSAADLGWKL 343 (549)
T ss_dssp ------------------CCCEEE----EEEEEEECCEECSCSEETTEEECGGGTEECCCGGGHHHHHHHHHHHHHHHHH
T ss_pred ------------------CceeEE----EEecchhHhhhHHhhcCCcEEEEccccccCCCccCCccccccHHHHHHHHHH
Confidence 110111 1235777777889999999999999999999999999999999999999999
Q ss_pred HHhhhcCCCcchHHHHHHHHHHhhHHHHHHHHHHHHHHHhhcCC---------CchHHHHHHHHHHHhcc
Q 010225 428 AEGIAVGADIGEASLLKKYEAERKPANIVMMAVLDGFQKAYSVD---------FGPLNILRAAAFHGAQY 488 (514)
Q Consensus 428 ~~~~~~~~~~~~~~~l~~Y~~~r~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~r~~~l~~~~~ 488 (514)
...++.. +.+.+|+.|+++|++++..++..+..+.+++... ++....+|+.+...+..
T Consensus 344 a~~l~g~---a~~~lL~~Y~~eR~~~a~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~ 410 (549)
T 2r0c_A 344 AATLRGW---AGPGLLATYEEERRPVAITSLEEANVNLRRTMDRELPPGLHDDGPRGERIRAAVAEKLER 410 (549)
T ss_dssp HHHHHTC---SCTTTTHHHHHHHHHHHHHHHHC----------CCCCTTTTCCSHHHHHHHHHHHHHHHH
T ss_pred HHHHcCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccCcchHHHHHHHHHHHHh
Confidence 9988642 2367999999999999999999999998888642 55567788877776643
No 12
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=100.00 E-value=2.2e-37 Score=316.25 Aligned_cols=335 Identities=21% Similarity=0.214 Sum_probs=235.3
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHh
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQ 132 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~ 132 (514)
+.++||+||||||+||++|+.|++. |++|+|||+.+.+. ...+++..+++++.++|+++|+++ ..
T Consensus 3 ~~~~~V~IVGaG~aGl~~A~~L~~~----G~~v~v~E~~~~~~---------~~~~~g~~l~~~~~~~l~~~g~~~--~~ 67 (397)
T 2vou_A 3 PTTDRIAVVGGSISGLTAALMLRDA----GVDVDVYERSPQPL---------SGFGTGIVVQPELVHYLLEQGVEL--DS 67 (397)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSSSSC---------CCCSCEEECCHHHHHHHHHTTCCG--GG
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhC----CCCEEEEecCCCCC---------CccccccccChhHHHHHHHcCCcc--cc
Confidence 3468999999999999999999996 99999999987541 234567889999999999999987 23
Q ss_pred hhccCcceEEEEeC-CCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCC
Q 010225 133 HRHAYFDKMQVWDY-TGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDS 211 (514)
Q Consensus 133 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~ 211 (514)
.. .+...+.+++. .+.....+.. ....+.+..+.+.|.+.+. +++|+++++|++++.
T Consensus 68 ~~-~~~~~~~~~~~~~g~~~~~~~~-------~~~~~~~~~l~~~L~~~~~---~~~i~~~~~v~~i~~----------- 125 (397)
T 2vou_A 68 IS-VPSSSMEYVDALTGERVGSVPA-------DWRFTSYDSIYGGLYELFG---PERYHTSKCLVGLSQ----------- 125 (397)
T ss_dssp TC-BCCCEEEEEETTTCCEEEEEEC-------CCCEEEHHHHHHHHHHHHC---STTEETTCCEEEEEE-----------
T ss_pred cc-ccccceEEEecCCCCccccccC-------cccccCHHHHHHHHHHhCC---CcEEEcCCEEEEEEe-----------
Confidence 22 35666777765 4432222211 0124778999999998873 489999999999987
Q ss_pred CCccccccccCCeeEEEeCCCcEEEeeE-EEecCCCchhhhhhCCCccCCCCCceEEEEEEEecCCCc--------ceEE
Q 010225 212 TPSATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKSRVRELAGFKTTGWSYSQNAIICTVEHNKENY--------CAWQ 282 (514)
Q Consensus 212 ~~~~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~ 282 (514)
.++.+.|++.+|+++.||+ |+|||.+|.+|+.++ +......+...+.+.++...... ....
T Consensus 126 ---------~~~~v~v~~~~g~~~~ad~vV~AdG~~S~vr~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (397)
T 2vou_A 126 ---------DSETVQMRFSDGTKAEANWVIGADGGASVVRKRLL-GIEPTYAGYVTWRGVLQPGEVADDVWNYFNDKFTY 195 (397)
T ss_dssp ---------CSSCEEEEETTSCEEEESEEEECCCTTCHHHHHHH-CCCCEEEEEEEEEEEECTTSSCHHHHHHHTTEEEE
T ss_pred ---------cCCEEEEEECCCCEEECCEEEECCCcchhHHHHhc-cCCCCccceEEEEEEeeccccChhhhhhhcCceeE
Confidence 4456889999999999999 999999999999998 54322223344455554221111 1222
Q ss_pred EecCCCceEEeecCCC------ceEEEEEcCccchHHhhC------------------CCHHHHHHHHHHhhcCCCCCCC
Q 010225 283 RFLPAGPIALLPIGDN------FSNIVWTMNPKDASDCKS------------------MNEDDFVKILNHALDYGYGPHP 338 (514)
Q Consensus 283 ~~~~~g~~~~~p~~~~------~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~ 338 (514)
++.+++++.++|++++ ..+++|+.+......... .+.+.+ ..+.+.+...|.+
T Consensus 196 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-- 272 (397)
T 2vou_A 196 GLLDDGHLIAYPIPGRENAESPRLNFQWYWNVAEGPDLDELMTDVRGIRLPTSVHNNSLNPHNL-RQFHSKGESLFKP-- 272 (397)
T ss_dssp EEETTEEEEEEEECCSSTTSCCEEEEEEEEECCTTHHHHHHTBCTTSCBCSSEECGGGCCHHHH-HHHHHHHTTSCHH--
T ss_pred EecCCCEEEEEECCCCCCccceeEEEEEEecCCCccchhhhccCCCCcccccccCcccCCHHHH-HHHHHHHHhhChH--
Confidence 3456677888888763 556777765433111100 122333 2332222111111
Q ss_pred CCCCCCccccccccccCccccccccccCCCceeeeccceeeeecccccccccccCcEEEEcccccccCCcccccchhhhH
Q 010225 339 KSISSGSVDMFSWFRGDATLSAKECFEVPPRVVKLASERMVFPLSLKHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFG 418 (514)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~LvGDAAh~~~P~~GqG~~~al~ 418 (514)
+.. +.+.......+|+....+++|..+||+|+|||||.++|+.|||+|+||+
T Consensus 273 ----------~~~------------------~~~~~~~~~~~~~~~~~~~~~~~grv~LiGDAAH~~~P~~GqG~n~ai~ 324 (397)
T 2vou_A 273 ----------FRD------------------LVLNASSPFVTVVADATVDRMVHGRVLLIGDAAVTPRPHAAAGGAKASD 324 (397)
T ss_dssp ----------HHH------------------HHHHCSSCEEEEEEEBCCSCSEETTEEECGGGTSBCCGGGSCHHHHHHH
T ss_pred ----------HHH------------------HHhccCCcceeeeeeecCCceecCcEEEEeccccccCCcchhhHHHHHH
Confidence 000 0111112234677666778899999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcCCCcchHHHHHHHHHHhhHHHHHHHHHHHHHHHhhcCC
Q 010225 419 DASTLSRIIAEGIAVGADIGEASLLKKYEAERKPANIVMMAVLDGFQKAYSVD 471 (514)
Q Consensus 419 da~~La~~l~~~~~~~~~~~~~~~l~~Y~~~r~~~~~~~~~~~~~~~~~~~~~ 471 (514)
||..|+++|.. ..++ ..+|+.|+++|++++..++..++.+.++++..
T Consensus 325 DA~~La~~L~~----~~~~--~~~L~~Ye~~R~~~~~~~~~~s~~~~~~~~~~ 371 (397)
T 2vou_A 325 DARTLAEVFTK----NHDL--RGSLQSWETRQLQQGHAYLNKVKKMASRLQHG 371 (397)
T ss_dssp HHHHHHHHHHH----CSCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHhc----CCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999985 2233 78999999999999999999999999998864
No 13
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=100.00 E-value=7.4e-38 Score=317.85 Aligned_cols=323 Identities=20% Similarity=0.210 Sum_probs=231.5
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhh
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQH 133 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~ 133 (514)
..+||+||||||+|+++|+.|++. |++|+|||+.+.++ ..+++..+++++.++|+++|+++.+...
T Consensus 10 ~~~dVvIVGaG~aGl~~A~~L~~~----G~~v~viE~~~~~~----------~~~~~~~l~~~~~~~l~~~g~~~~~~~~ 75 (379)
T 3alj_A 10 KTRRAEVAGGGFAGLTAAIALKQN----GWDVRLHEKSSELR----------AFGAGIYLWHNGLRVLEGLGALDDVLQG 75 (379)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSSSCC----------CCSSEEEEEHHHHHHHHHTTCHHHHHTT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC----CCCEEEEecCCCCC----------CCCceEEeCccHHHHHHHcCCHHHHHhh
Confidence 368999999999999999999996 99999999998762 3466899999999999999999988776
Q ss_pred hccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCC
Q 010225 134 RHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTP 213 (514)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~ 213 (514)
.. ....+.+++. +.....++.. ....+.++|..|.+.|.+.+.+.| ++|+++++|++++.
T Consensus 76 ~~-~~~~~~~~~~-g~~~~~~~~~----~~~~~~~~r~~l~~~L~~~~~~~g-v~i~~~~~v~~i~~------------- 135 (379)
T 3alj_A 76 SH-TPPTYETWMH-NKSVSKETFN----GLPWRIMTRSHLHDALVNRARALG-VDISVNSEAVAADP------------- 135 (379)
T ss_dssp CB-CCSCEEEEET-TEEEEEECGG----GCCEEEEEHHHHHHHHHHHHHHTT-CEEESSCCEEEEET-------------
T ss_pred CC-CccceEEEeC-CceeeeccCC----CCceEEECHHHHHHHHHHHHHhcC-CEEEeCCEEEEEEe-------------
Confidence 55 5667777776 4332222211 223688999999999999999886 99999999999964
Q ss_pred ccccccccCCeeEEEeCCCcEEEeeE-EEecCCCchhhhhhCCCccCCCCCceEEEEEEEec-----CC-CcceEE---E
Q 010225 214 SATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKSRVRELAGFKTTGWSYSQNAIICTVEHN-----KE-NYCAWQ---R 283 (514)
Q Consensus 214 ~~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~---~ 283 (514)
++ .|++.+|+++.||+ |+|||.+|.+|+.++........+...+.+.++.. .. .....+ +
T Consensus 136 ---------~~-~v~~~~g~~~~ad~vV~AdG~~s~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (379)
T 3alj_A 136 ---------VG-RLTLQTGEVLEADLIVGADGVGSKVRDSIGFKQDRWVSKDGLIRLIVPRMKKELGHGEWDNTIDMWNF 205 (379)
T ss_dssp ---------TT-EEEETTSCEEECSEEEECCCTTCHHHHHHCCCEEEEEEEEEEEEEEEECCHHHHCSSCTTSEEEEECC
T ss_pred ---------CC-EEEECCCCEEEcCEEEECCCccHHHHHHhcCCCCcCcCCcEEEEEEechhhccCCcCCcccccccceE
Confidence 23 77788898999999 99999999999999764433333445556666553 11 122333 4
Q ss_pred ecCCCceEEeecCCCceEEEEEcCccchHHhhCCCHHHHHHHHHHhhcCCCCCCCCCCCCCccccccccccCcccccccc
Q 010225 284 FLPAGPIALLPIGDNFSNIVWTMNPKDASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKEC 363 (514)
Q Consensus 284 ~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (514)
+.++++++++|++++...+++..+..... ++.+.+.+..... . .. .+..++...
T Consensus 206 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~------~~~l~~~~~~~~~-----~-------~~-~~~~~l~~~------- 259 (379)
T 3alj_A 206 WPRVQRILYSPCNENELYLGLMAPAADPR------GSSVPIDLEVWVE-----M-------FP-FLEPCLIEA------- 259 (379)
T ss_dssp SSSCCEEEEEECSSSEEEEEEEECTTCTT------TTCSSCCHHHHHH-----H-------CG-GGHHHHHHH-------
T ss_pred ECCCCEEEEEECCCCcEEEEEEecCCCCC------HHHHHHHHhcCCc-----h-------hc-cHHHHHhhC-------
Confidence 66889999999999887777666532110 0000000000000 0 00 000000000
Q ss_pred ccCCCceeeeccceeeeecccc-cccccccCcEEEEcccccccCCcccccchhhhHHHHHHHHHHHHhhhcCCCcchHHH
Q 010225 364 FEVPPRVVKLASERMVFPLSLK-HANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASL 442 (514)
Q Consensus 364 ~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~v~LvGDAAh~~~P~~GqG~~~al~da~~La~~l~~~~~~~~~~~~~~~ 442 (514)
.......|+++.. .+++|..+||+|+|||||.++|+.|||+|+||+||..|+++|... .+. ..+
T Consensus 260 ---------~~~~~~~~~~~~~~~~~~~~~~rv~lvGDAAh~~~P~~GqG~~~ai~da~~La~~L~~~----~~~--~~~ 324 (379)
T 3alj_A 260 ---------AKLKTARYDKYETTKLDSWTRGKVALVGDAAHAMCPALAQGAGCAMVNAFSLSQDLEEG----SSV--EDA 324 (379)
T ss_dssp ---------HTCTTCCEEEEEEEEESCSEETTEEECTHHHHCCCGGGSCHHHHHHHHHHHHHHHTTSS----SCH--HHH
T ss_pred ---------CccceEEecccccCCCCCcccCcEEEEEcccCCCCcchhhhHHHHHHHHHHHHHHhccc----cCH--HHH
Confidence 0011123554442 367888999999999999999999999999999999999999752 233 789
Q ss_pred HHHHHHHhhHHHHHHHHHH
Q 010225 443 LKKYEAERKPANIVMMAVL 461 (514)
Q Consensus 443 l~~Y~~~r~~~~~~~~~~~ 461 (514)
|+.|+++|++++..++..+
T Consensus 325 l~~Y~~~r~~~~~~~~~~s 343 (379)
T 3alj_A 325 LVAWETRIRPITDRCQALS 343 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999887
No 14
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=100.00 E-value=2.5e-36 Score=321.13 Aligned_cols=351 Identities=16% Similarity=0.166 Sum_probs=251.3
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHh
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQ 132 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~ 132 (514)
++.+||+||||||+|+++|+.|++. |++|+|||+.+.+. ...+..+.+.+..+|+.+|+++.+..
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar~----G~~V~LiEr~~~~~-----------~~~G~~l~p~~~~~l~~lGl~~~l~~ 85 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHKL----GHDVTIYERSAFPR-----------YRVGESLLPGTMSILNRLGLQEKIDA 85 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSCSSC-----------CCCCCBCCHHHHHHHHHTTCHHHHHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHcC----CCCEEEEcCCCCCC-----------CceeeeECHHHHHHHHHcCCcHHHHh
Confidence 4579999999999999999999996 99999999997652 23367889999999999999998887
Q ss_pred hhccCcceEEEEeCCCccee--eeccCCC--CCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcc
Q 010225 133 HRHAYFDKMQVWDYTGLGYT--KYNARDV--NKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSIS 208 (514)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~ 208 (514)
..........+......... .+..... .....++.++|..|.+.|.+.+++.| ++++++++|++++.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~G-v~i~~g~~V~~v~~-------- 156 (591)
T 3i3l_A 86 QNYVKKPSATFLWGQDQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRG-ITVHEETPVTDVDL-------- 156 (591)
T ss_dssp HCCEEECEEEEECSSSCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTT-CEEETTCCEEEEEC--------
T ss_pred cCCcccCCcEEEecCCCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCC-CEEEeCCEEEEEEE--------
Confidence 65433333333222221111 2211111 12345789999999999999999877 99999999999986
Q ss_pred cCCCCccccccccCCeeEEEeC-CC--cEEEeeE-EEecCCCchhhhhhCCCccCCCCCceEEEEEEEec----CC-Ccc
Q 010225 209 VDSTPSATTLFTKGHLAKLDLS-DG--TSLYAKL-VGADGGKSRVRELAGFKTTGWSYSQNAIICTVEHN----KE-NYC 279 (514)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~v~~~-~g--~~~~ad~-V~AdG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~----~~-~~~ 279 (514)
+++..+.|.+. +| .++.||+ |+|||.+|.+|+.++.......+...++...+... .+ ...
T Consensus 157 -----------~~g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S~lr~~lg~~~~~~~~~~~av~~~~~~~~~~~~~~~~~ 225 (591)
T 3i3l_A 157 -----------SDPDRVVLTVRRGGESVTVESDFVIDAGGSGGPISRKLGVRQYDEFYRNFAVWSYFKLKDPFEGDLKGT 225 (591)
T ss_dssp -----------CSTTCEEEEEEETTEEEEEEESEEEECCGGGCHHHHHHTCEEEEEEEEEEEEEEEEECCCSCCSTTTTC
T ss_pred -----------cCCCEEEEEEecCCceEEEEcCEEEECCCCcchhHHHcCCCCCCccccceEEEEEEecCccccCCCCCc
Confidence 12356777776 66 5799999 99999999999999876543333334444444332 11 245
Q ss_pred eEEEecCCCceEEeecCCCceEEEEEcCccchHHhhCCCHHHHHHHHHHhhcCCCCCCCCCCCCCccccccccccCcccc
Q 010225 280 AWQRFLPAGPIALLPIGDNFSNIVWTMNPKDASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLS 359 (514)
Q Consensus 280 ~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (514)
.+..+.+.|++|++|.+++..++.|.............+.+.+...+...++ .+...+...
T Consensus 226 ~~~~~~~~G~~w~iPl~~~~~sv~~~~~~~~~~~l~~~~~~~~~~~l~~~~p----------------~l~~~l~~~--- 286 (591)
T 3i3l_A 226 TYSITFEDGWVWMIPIKDDLYSVGLVVDRSKSAEVREQGADAFYSSTLAKCA----------------KAMDILGGA--- 286 (591)
T ss_dssp EEEEEETTEEEEEEECSSSEEEEEEEEEGGGHHHHHHHCHHHHHHHHHTTCH----------------HHHHHHTTC---
T ss_pred eEEEEcCCcEEEEEECCCCeEEEEEEcCHHHHhhhccCCHHHHHHHHHHhCH----------------HHHHHHhcC---
Confidence 6667779999999999999989988887665544444455666666554222 111111110
Q ss_pred ccccccCCCceeeeccceeeeecccccccccccCcEEEEcccccccCCcccccchhhhHHHHHHHHHHHHhhhcCCCcch
Q 010225 360 AKECFEVPPRVVKLASERMVFPLSLKHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGE 439 (514)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~LvGDAAh~~~P~~GqG~~~al~da~~La~~l~~~~~~~~~~~~ 439 (514)
........++........|..+|+++||||||.++|+.|||+|+|++||..|+++|.+.+..+. ..
T Consensus 287 ------------~~~~~~~~~~~~~~~~~~~~~~rvvLIGDAAh~~~Pl~GqGinlAl~dA~~LA~~L~~~l~~~~--~~ 352 (591)
T 3i3l_A 287 ------------EQVDEVRIVQDWSYDTEVFSADRFFLCGDAACFTDPLFSQGVHLASQSAVSAAAAIDRITRHGD--EK 352 (591)
T ss_dssp ------------EECSCCEEEEEEEEEESCSEETTEEECGGGTCBCCGGGCCHHHHHHHHHHHHHHHHHHHHHCGG--GH
T ss_pred ------------ccccCceEecccccchhhcccCCEEEEccccccCCCcccccHHHHHHHHHHHHHHHHHHHhCCc--hH
Confidence 0111111222233345678889999999999999999999999999999999999999887542 23
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHH--HhhcCC
Q 010225 440 ASLLKKYEAERKPANIVMMAVLDGFQ--KAYSVD 471 (514)
Q Consensus 440 ~~~l~~Y~~~r~~~~~~~~~~~~~~~--~~~~~~ 471 (514)
..+++.|++.|+.++..+..+...++ ......
T Consensus 353 ~~al~~Y~~~~~~~~~~i~~~~~~~Y~~~~~~r~ 386 (591)
T 3i3l_A 353 DAVHAWYNRTYREAYEQYHQFLASFYTFASFTEP 386 (591)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 67999999999999999999998888 555443
No 15
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=100.00 E-value=8.6e-37 Score=313.27 Aligned_cols=336 Identities=18% Similarity=0.201 Sum_probs=230.0
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcE-EEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHh
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLS-VAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQ 132 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~-V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~ 132 (514)
.++||+||||||+||++|+.|++. |++ |+||||.+.+ ...+++..+++++.++|+++|+++.+..
T Consensus 3 ~~~dVvIVGaG~aGl~~A~~L~~~----G~~~v~v~E~~~~~----------~~~g~g~~l~~~~~~~l~~lg~~~~l~~ 68 (410)
T 3c96_A 3 EPIDILIAGAGIGGLSCALALHQA----GIGKVTLLESSSEI----------RPLGVGINIQPAAVEALAELGLGPALAA 68 (410)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT----TCSEEEEEESSSSC----------CCCSCEEEECHHHHHHHHHTTCHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhC----CCCeEEEEECCCCc----------ccceeEEEEChHHHHHHHHCCChHHHHh
Confidence 468999999999999999999996 999 9999999866 2355689999999999999999998887
Q ss_pred hhccCcceEEEEeCCCcceeeeccC-CCCCcccEEEEehHHHHHHHHHHHhcC-CCceEEcCCeeEEEeeCCCCCCcccC
Q 010225 133 HRHAYFDKMQVWDYTGLGYTKYNAR-DVNKEILGCVVENKVLHSSLLSCMQNT-EFQKTIYPSRLTSMALLPSSSSISVD 210 (514)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~r~~l~~~L~~~~~~~-g~v~v~~~~~v~~v~~~~~~~~~~~~ 210 (514)
... +...+.+++..+......... ........+.++|..|.+.|.+.+.+. |.++|+++++|++++.
T Consensus 69 ~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~---------- 137 (410)
T 3c96_A 69 TAI-PTHELRYIDQSGATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE---------- 137 (410)
T ss_dssp HSE-EECEEEEECTTSCEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE----------
T ss_pred hCC-CcceEEEEcCCCCEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec----------
Confidence 655 556666766554332222111 111223457899999999999999763 5468999999999964
Q ss_pred CCCccccccccCCeeEEEeCC---C--cEEEeeE-EEecCCCchhhhhhCCCccCCCC-CceEEEEEEEecCC-CcceEE
Q 010225 211 STPSATTLFTKGHLAKLDLSD---G--TSLYAKL-VGADGGKSRVRELAGFKTTGWSY-SQNAIICTVEHNKE-NYCAWQ 282 (514)
Q Consensus 211 ~~~~~~~~~~~~~~~~v~~~~---g--~~~~ad~-V~AdG~~S~vR~~l~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~ 282 (514)
++.+.|.+.+ | .++.||+ |+|||.+|.+|+.++.......+ +...+.+..+.... ......
T Consensus 138 -----------~~~v~v~~~~~~~g~~~~~~ad~vV~AdG~~S~vR~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 206 (410)
T 3c96_A 138 -----------RDGRVLIGARDGHGKPQALGADVLVGADGIHSAVRAHLHPDQRPLSHGGITMWRGVTEFDRFLDGKTMI 206 (410)
T ss_dssp -----------ETTEEEEEEEETTSCEEEEEESEEEECCCTTCHHHHHHCTTCCCCEEEEEEEEEEEEEESCCTTSSEEE
T ss_pred -----------CCccEEEEecCCCCCceEEecCEEEECCCccchhHHHhcCCCCCCCcCCeeEEEeecccccccCCCeEE
Confidence 1346677655 7 4799999 99999999999999754433333 22233333333221 122333
Q ss_pred Eec--CCCceEEeecCC-----CceEEEEEcCccchH--------H-hhCCCHHHHHHHHHHhhcCCCCCCCCCCCCCcc
Q 010225 283 RFL--PAGPIALLPIGD-----NFSNIVWTMNPKDAS--------D-CKSMNEDDFVKILNHALDYGYGPHPKSISSGSV 346 (514)
Q Consensus 283 ~~~--~~g~~~~~p~~~-----~~~~~~~~~~~~~~~--------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (514)
.+. +.++++++|+.+ +...+.|........ . ....+.+.+.+.+ . +|.....
T Consensus 207 ~~~~~~~~~~~~~p~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~-~~~~~~~------- 274 (410)
T 3c96_A 207 VANDEHWSRLVAYPISARHAAEGKSLVNWVCMVPSAAVGQLDNEADWNRDGRLEDVLPFF----A-DWDLGWF------- 274 (410)
T ss_dssp EEECTTCCEEEEEECCHHHHTTTCEEEEEEEEEEHHHHCCCCSSCCTTCBCCHHHHHHHH----T-TCCBTTB-------
T ss_pred EecCCCCcEEEEEecCCcccCCCCcEEEEEEEecCcccccCCCccccCCCCCHHHHHHHh----c-CCCCchh-------
Confidence 344 367889999863 455566655322111 0 0112233443332 2 2221100
Q ss_pred ccccccccCccccccccccCCCceeeeccceeeeecccc-cccccccCcEEEEcccccccCCcccccchhhhHHHHHHHH
Q 010225 347 DMFSWFRGDATLSAKECFEVPPRVVKLASERMVFPLSLK-HANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSR 425 (514)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~v~LvGDAAh~~~P~~GqG~~~al~da~~La~ 425 (514)
.+.. +.+.......||+... +.++|..+||+|+|||||.++|+.|||+|+||+||..|++
T Consensus 275 -~~~~------------------~i~~~~~~~~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~GqG~n~ai~Da~~La~ 335 (410)
T 3c96_A 275 -DIRD------------------LLTRNQLILQYPMVDRDPLPHWGRGRITLLGDAAHLMYPMGANGASQAILDGIELAA 335 (410)
T ss_dssp -CHHH------------------HHHTCSEEEEEEEEECCCCSCCCBTTEEECTHHHHCCCSSTTCTHHHHHHHHHHHHH
T ss_pred -HHHH------------------HHhcCcccceeecccCCCccccccCCEEEEecccCCCCCccchhHHHHHHHHHHHHH
Confidence 0000 0111122234665543 3678989999999999999999999999999999999999
Q ss_pred HHHHhhhcCCCcchHHHHHHHHHHhhHHHHHHHHHHH
Q 010225 426 IIAEGIAVGADIGEASLLKKYEAERKPANIVMMAVLD 462 (514)
Q Consensus 426 ~l~~~~~~~~~~~~~~~l~~Y~~~r~~~~~~~~~~~~ 462 (514)
+|... + + ...+|+.|+++|++++..++..++
T Consensus 336 ~L~~~---~-~--~~~~L~~Ye~~r~~~~~~~~~~s~ 366 (410)
T 3c96_A 336 ALARN---A-D--VAAALREYEEARRPTANKIILANR 366 (410)
T ss_dssp HHHHC---S-S--HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcc---C-C--HHHHHHHHHHHHHHHHHHHHHHhH
Confidence 99873 2 3 378999999999999999988776
No 16
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=100.00 E-value=5.8e-36 Score=315.46 Aligned_cols=386 Identities=15% Similarity=0.120 Sum_probs=261.5
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHH-HHHHcCCcHHHH
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATIS-FFKEIGAWQYVQ 131 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~l~~lgl~~~~~ 131 (514)
+.++||+||||||+|+++|+.|++. |++|+|||+.+.+. ...+..+.+.... +++.+|+++.+.
T Consensus 5 ~~~~dVvIVGgG~aGl~aA~~La~~----G~~V~liE~~~~~~-----------~~~g~~~~~~~~~~~l~~lgl~~~~~ 69 (512)
T 3e1t_A 5 PEVFDLIVIGGGPGGSTLASFVAMR----GHRVLLLEREAFPR-----------HQIGESLLPATVHGICAMLGLTDEMK 69 (512)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHTT----TCCEEEECSSCSSC-----------CCSCCBCCHHHHTTHHHHTTCHHHHH
T ss_pred CccCCEEEECcCHHHHHHHHHHHhC----CCCEEEEccCCCCC-----------CCCCcccCcchHHHHHHHhCcHHHHH
Confidence 3468999999999999999999996 99999999998552 2234566777654 899999998887
Q ss_pred hhhccCcceEEEEeCCCcce--eeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCccc
Q 010225 132 QHRHAYFDKMQVWDYTGLGY--TKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISV 209 (514)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~ 209 (514)
...........+........ ..+..........++.++|..|.+.|.+.+++.| ++|+++++|++++.
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~G-v~i~~~~~V~~v~~--------- 139 (512)
T 3e1t_A 70 RAGFPIKRGGTFRWGKEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKG-VDVRERHEVIDVLF--------- 139 (512)
T ss_dssp TTTCCEECEEEEECSSCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTT-CEEESSCEEEEEEE---------
T ss_pred HcCCccccCceEEecCCccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCC-CEEEcCCEEEEEEE---------
Confidence 76553322222222222111 2222222334456788999999999999999877 99999999999987
Q ss_pred CCCCccccccccCC---eeEEEeCCCc--EEEeeE-EEecCCCchhhhhhCCCccCCCCCceEEEEEEEec----CCC-c
Q 010225 210 DSTPSATTLFTKGH---LAKLDLSDGT--SLYAKL-VGADGGKSRVRELAGFKTTGWSYSQNAIICTVEHN----KEN-Y 278 (514)
Q Consensus 210 ~~~~~~~~~~~~~~---~~~v~~~~g~--~~~ad~-V~AdG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~----~~~-~ 278 (514)
.++ .+.+...+|+ ++.||+ |+|||.+|.+|+.++.......+...++.+.+... .+. .
T Consensus 140 -----------~~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S~vr~~lg~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 208 (512)
T 3e1t_A 140 -----------EGERAVGVRYRNTEGVELMAHARFIVDASGNRTRVSQAVGERVYSRFFQNVALYGYFENGKRLPAPRQG 208 (512)
T ss_dssp -----------ETTEEEEEEEECSSSCEEEEEEEEEEECCCTTCSSGGGTCCEEECSTTCEEEEEEEEESCCCCSTTCTT
T ss_pred -----------ECCEEEEEEEEeCCCCEEEEEcCEEEECCCcchHHHHHcCCCccCchhcceEEEEEecCCccCCCCCcC
Confidence 223 3556666785 799999 99999999999999765555555666777666532 122 3
Q ss_pred ceEEEecCCCceEEeecCCCceEEEEEcCccchHHhhCCCHHHHHHHHHHhhcCCCCCCCCCCCCCccccccccccCccc
Q 010225 279 CAWQRFLPAGPIALLPIGDNFSNIVWTMNPKDASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATL 358 (514)
Q Consensus 279 ~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (514)
..+..+.+.|++|++|++++..+++|..+........ .+.++....+...++ .+..++....
T Consensus 209 ~~~~~~~~~G~~~~~Pl~~~~~~vg~~~~~~~~~~~~-~~~~~~~~~~l~~~p----------------~~~~~l~~~~- 270 (512)
T 3e1t_A 209 NILSAAFQDGWFWYIPLSDTLTSVGAVVSREAAEAIK-DGHEAALLRYIDRCP----------------IIKEYLAPAT- 270 (512)
T ss_dssp SEEEEEETTEEEEEEECSSSEEEEEEEEEHHHHTTTS-SCHHHHHHHHHHTSH----------------HHHHHHTTCE-
T ss_pred ceEEEEeCCceEEEEEeCCCeEEEEEEecHHHhhhhc-CCHHHHHHHHHHhCc----------------hHHHHHhcCc-
Confidence 4566677899999999999988888887654332222 223333333322111 1111111000
Q ss_pred cccccccCCCceeeeccceeeeecccccccccccCcEEEEcccccccCCcccccchhhhHHHHHHHHHHHHhhhcCCCcc
Q 010225 359 SAKECFEVPPRVVKLASERMVFPLSLKHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIG 438 (514)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~LvGDAAh~~~P~~GqG~~~al~da~~La~~l~~~~~~~~~~~ 438 (514)
..... ........+.......+|..+||+|||||||.++|+.|||+|+|++||..|+++|...++... .
T Consensus 271 ---~~~~~------~~~~i~~~~~~~~~~~~~~~~~vvlvGDAAh~~~P~~GqG~~~Al~dA~~La~~L~~~l~~~~--~ 339 (512)
T 3e1t_A 271 ---RVTTG------DYGEIRIRKDYSYCNTSFWKNGMALVGDAACFVDPVFSSGVHLATYSALLVARAINTCLAGEM--S 339 (512)
T ss_dssp ---ECCSS------TTSSCEEEESCCEEESCSBCSSEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHTTTCS--C
T ss_pred ---ccccc------ccccceeeccccccccccccCCEEEEechhhcCCCccccCHHHHHHHHHHHHHHHHHHHcCCc--c
Confidence 00000 000000111122245678889999999999999999999999999999999999999876433 3
Q ss_pred hHHHHHHHHHHhhHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHhccChhHHHHHHHHhhcCCCCC
Q 010225 439 EASLLKKYEAERKPANIVMMAVLDGFQKAYSVDFGPLNILRAAAFHGAQYISPLKRNIISYASGEQRLP 507 (514)
Q Consensus 439 ~~~~l~~Y~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~g~~~~~ 507 (514)
...+|+.|++.|+++...+......++.+....+.+. |.. ...+...+...+.++..+.|..+.-
T Consensus 340 ~~~aL~~Ye~~~~~~~~~~~~~~~~~y~~~~r~ds~f-W~~---~~~~~~~~~~~~~f~~~~~g~~~~~ 404 (512)
T 3e1t_A 340 EQRCFEEFERRYRREYGNFYQFLVAFYDMNQDTDSYF-WSA---RKIINTEERANEAFVRLIAGRSNLD 404 (512)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTTCHH-HHT---SSCCCSHHHHHHHHHHHHTTCCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHH-HHH---HhhhccCcHHHHHHHHHHcCCCChH
Confidence 4789999999999999999999998888876543332 211 1223334666777777777776543
No 17
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=100.00 E-value=1.3e-36 Score=310.77 Aligned_cols=354 Identities=19% Similarity=0.192 Sum_probs=234.4
Q ss_pred CCCCCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeCh-hhHHHHHHcCCcH
Q 010225 50 TNNDDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTP-ATISFFKEIGAWQ 128 (514)
Q Consensus 50 ~~~~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~l~~lgl~~ 128 (514)
|+++.++||+||||||+|+++|+.|++. |++|+||||.+.+.. ...+.+..+.+ ++.++|+++|+++
T Consensus 21 M~~~~~~dV~IVGaG~aGl~~A~~L~~~----G~~v~v~E~~~~~~~--------~~~g~~~~~~~~~~~~~l~~~gl~~ 88 (398)
T 2xdo_A 21 MNLLSDKNVAIIGGGPVGLTMAKLLQQN----GIDVSVYERDNDREA--------RIFGGTLDLHKGSGQEAMKKAGLLQ 88 (398)
T ss_dssp --CCTTCEEEEECCSHHHHHHHHHHHTT----TCEEEEEECSSSTTC--------CCCSCCEECCTTTHHHHHHHTTCHH
T ss_pred ccccCCCCEEEECCCHHHHHHHHHHHHC----CCCEEEEeCCCCccc--------cccCCeeeeCCccHHHHHHhcChHH
Confidence 3345678999999999999999999996 999999999876531 12234455654 5689999999999
Q ss_pred HHHhhhccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcc
Q 010225 129 YVQQHRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSIS 208 (514)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~ 208 (514)
.+..... +... .+++..+........... .......++|..|.+.|.+.+.+ ++|+++++|++++.
T Consensus 89 ~~~~~~~-~~~~-~~~~~~g~~~~~~~~~~~-~~~~~~~i~r~~l~~~L~~~~~~---~~i~~~~~v~~i~~-------- 154 (398)
T 2xdo_A 89 TYYDLAL-PMGV-NIADEKGNILSTKNVKPE-NRFDNPEINRNDLRAILLNSLEN---DTVIWDRKLVMLEP-------- 154 (398)
T ss_dssp HHHHHCB-CCCE-EEECSSSEEEEECCCGGG-TTSSCCEECHHHHHHHHHHTSCT---TSEEESCCEEEEEE--------
T ss_pred HHHHhhc-ccce-EEECCCCCchhhcccccc-CCCCCceECHHHHHHHHHhhcCC---CEEEECCEEEEEEE--------
Confidence 9887654 3444 566554432222200100 11122468999999999998753 67899999999987
Q ss_pred cCCCCccccccccCCeeEEEeCCCcEEEeeE-EEecCCCchhhhhhCCCccCCCCCceEEEEEEEecC---C------Cc
Q 010225 209 VDSTPSATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKSRVRELAGFKTTGWSYSQNAIICTVEHNK---E------NY 278 (514)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~---~------~~ 278 (514)
.++.++|++.+|++++||+ |+|||.+|.+|+.++... ....+..++.+.++... + ..
T Consensus 155 ------------~~~~v~v~~~~g~~~~ad~vV~AdG~~S~vR~~l~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 221 (398)
T 2xdo_A 155 ------------GKKKWTLTFENKPSETADLVILANGGMSKVRKFVTDTE-VEETGTFNIQADIHQPEINCPGFFQLCNG 221 (398)
T ss_dssp ------------CSSSEEEEETTSCCEEESEEEECSCTTCSCCTTTCCCC-CEEEEEEEEEEEESSHHHHSHHHHHHHTT
T ss_pred ------------CCCEEEEEECCCcEEecCEEEECCCcchhHHhhccCCC-ceEcceEEEEEEeCchhccCchhHhhcCC
Confidence 3356889999998899999 999999999999986421 11113344444443210 1 01
Q ss_pred ceEEEecCCCceEEeecCCCceEEEEEcCccch-HH---hhCCCHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccccc
Q 010225 279 CAWQRFLPAGPIALLPIGDNFSNIVWTMNPKDA-SD---CKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRG 354 (514)
Q Consensus 279 ~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (514)
..+..+.+...++++|.+++..++++....... .. ....+++.+.+.+.+.|. .|.+. +...+.
T Consensus 222 g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~-----------~~~~~~ 289 (398)
T 2xdo_A 222 NRLMASHQGNLLFANPNNNGALHFGISFKTPDEWKNQTQVDFQNRNSVVDFLLKEFS-DWDER-----------YKELIH 289 (398)
T ss_dssp SEEEEEETTEEEEEEEEETTEEEEEEEEECCTTC---CCSCTTCHHHHHHHHHHHTT-TSCHH-----------HHHHHH
T ss_pred ceEEEecCCCeEEEEeCCCCcEEEEEEEecCcccccccccCcCCHHHHHHHHHHHHc-CCChH-----------HHHHHh
Confidence 122334566667777888887777665532221 11 112356677777777665 33321 111100
Q ss_pred CccccccccccCCCceeeeccceeeeeccccc-cccccc-C--cEEEEcccccccCCcccccchhhhHHHHHHHHHHHHh
Q 010225 355 DATLSAKECFEVPPRVVKLASERMVFPLSLKH-ANNYVS-K--RVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEG 430 (514)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~-~--~v~LvGDAAh~~~P~~GqG~~~al~da~~La~~l~~~ 430 (514)
. ......++++..+ ...|.. + ||+|+|||||.++|+.|||+|+||+||..|+++|...
T Consensus 290 ~------------------~~~~~~~~~~~~~~~~~~~~~~~~rv~LiGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~ 351 (398)
T 2xdo_A 290 T------------------TLSFVGLATRIFPLEKPWKSKRPLPITMIGDAAHLMPPFAGQGVNSGLVDALILSDNLADG 351 (398)
T ss_dssp H------------------CSCCEEEEEEECCCCSCCCSCCSSCEEECTHHHHCCCCTTSCSHHHHHHHHHHHHHHHHSC
T ss_pred C------------------cccceeeeeEeccCCCCcccCCCccEEEEeehhccCCCccCccHHHHHHHHHHHHHHHHhc
Confidence 0 0011123333222 235654 5 8999999999999999999999999999999999874
Q ss_pred hhcCCCcchHHHHHHHHHHhhHHHHHHHHHHHHHH-HhhcCCCchHH
Q 010225 431 IAVGADIGEASLLKKYEAERKPANIVMMAVLDGFQ-KAYSVDFGPLN 476 (514)
Q Consensus 431 ~~~~~~~~~~~~l~~Y~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~ 476 (514)
+.+. .+.+|+.|+++|++++..++..+.... .+|....++..
T Consensus 352 ---~~~~-~~~~L~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~ 394 (398)
T 2xdo_A 352 ---KFNS-IEEAVKNYEQQMFIYGKEAQEESTQNEIEMFKPDFTFQQ 394 (398)
T ss_dssp ---CSSS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCC--
T ss_pred ---cCch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccc
Confidence 2231 378999999999999999999776665 56666665543
No 18
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=100.00 E-value=1.9e-35 Score=301.20 Aligned_cols=353 Identities=16% Similarity=0.147 Sum_probs=229.3
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhh
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQH 133 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~ 133 (514)
++|||+||||||+||++|+.|++. |++|+||||++.++. ....+..|++. +++.+++.......
T Consensus 3 e~yDViIVGaGpaGl~~A~~La~~----G~~V~v~Er~~~~~~---------~~~~g~~l~~~---~l~~l~~~~~~~~~ 66 (397)
T 3oz2_A 3 ETYDVLVVGGGPGGSTAARYAAKY----GLKTLMIEKRPEIGS---------PVRCGEGLSKG---ILNEADIKADRSFI 66 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSSTTC---------SCCSCCEEETH---HHHHTTCCCCTTTE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC----CCcEEEEeCCCCCCC---------CCceecccCHH---HHHHcCCCchhhhh
Confidence 369999999999999999999997 999999999886631 22234566654 56667764332221
Q ss_pred hccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCC
Q 010225 134 RHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTP 213 (514)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~ 213 (514)
. ..+....++...+.....+.. .......++.++|..|.+.|.+.+.+.| ++++++++|+++..
T Consensus 67 ~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~R~~~~~~L~~~a~~~G-~~~~~~~~v~~~~~------------- 130 (397)
T 3oz2_A 67 A-NEVKGARIYGPSEKRPIILQS-EKAGNEVGYVLERDKFDKHLAALAAKAG-ADVWVKSPALGVIK------------- 130 (397)
T ss_dssp E-EEESEEEEECTTCSSCEEEEC-SSSSCCCEEEECHHHHHHHHHHHHHHHT-CEEESSCCEEEEEE-------------
T ss_pred h-cccceEEEEeCCCceEeeccc-cccCCceeEEEEHHHHHHHHHHHHHhcC-cEEeeeeeeeeeee-------------
Confidence 1 245566676655544443332 2234556899999999999999999987 99999999999976
Q ss_pred ccccccccCCeeEEEe-CCC--cEEEeeE-EEecCCCchhhhhhCCCccCCCCCceEEEEEEEecC---CCcceEEE---
Q 010225 214 SATTLFTKGHLAKLDL-SDG--TSLYAKL-VGADGGKSRVRELAGFKTTGWSYSQNAIICTVEHNK---ENYCAWQR--- 283 (514)
Q Consensus 214 ~~~~~~~~~~~~~v~~-~~g--~~~~ad~-V~AdG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~--- 283 (514)
+.+..+.+.. .++ .+++||+ |+|||.+|.+|+.++.......+........+.... +......+
T Consensus 131 ------~~~~~~~v~~~~~~~~~~~~a~~vIgAdG~~S~vr~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (397)
T 3oz2_A 131 ------ENGKVAGAKIRHNNEIVDVRAKMVIAADGFESEFGRWAGLKSVILARNDIISALQYRMINVDVDPDYTDFYLGS 204 (397)
T ss_dssp ------ETTEEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHHTCGGGCCCGGGEEEEEEEEEESCCCCTTEEEEECST
T ss_pred ------ccceeeeeeecccccceEEEEeEEEeCCccccHHHHHcCCCcccccceeeeeeEEEEeeccccCcccceeeeec
Confidence 1222222322 233 3699999 999999999999998776665555444444333322 11222222
Q ss_pred ecCCCceEEeecCCCceEEEEEcCccchHHhhCCCHHHHHHHHHHhhcCCCCCCCCCCCCCccccccccccCcccccccc
Q 010225 284 FLPAGPIALLPIGDNFSNIVWTMNPKDASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKEC 363 (514)
Q Consensus 284 ~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (514)
..+.++.|++|.+++..++.+.......... .....+...+.+.++ .+.. .
T Consensus 205 ~~~~g~~~~~~~~~~~~~vg~~~~~~~~~~~--~~~~~~l~~~~~~~~----------------~l~~---~-------- 255 (397)
T 3oz2_A 205 IAPAGYIWVFPKGEGMANVGIGSSINWIHNR--FELKNYLDRFIENHP----------------GLKK---G-------- 255 (397)
T ss_dssp TSTTEEEEEEEEETTEEEEEEEEETTTSCSH--HHHHHHHHHHHHTCH----------------HHHT---S--------
T ss_pred cCCCceEEEeecccceeEEEEeeccchhhhh--hhHHHHHHHHHHhCc----------------cccc---c--------
Confidence 2367899999999998888776644321110 111222222222111 0000 0
Q ss_pred ccCCCceeeeccceeeeecccccccccccCcEEEEcccccccCCcccccchhhhHHHHHHHHHHHHhhhcCCCcchHHHH
Q 010225 364 FEVPPRVVKLASERMVFPLSLKHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLL 443 (514)
Q Consensus 364 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~LvGDAAh~~~P~~GqG~~~al~da~~La~~l~~~~~~~~~~~~~~~l 443 (514)
...+. .....|+ ......+..+||+|+|||||.++|++|||+|+||+||..||++|.++++.+. . ++.+|
T Consensus 256 -----~~~~~--~~~~~~~-~~~~~~~~~~~v~lvGDAA~~~~P~~G~Gi~~A~~~g~~~A~~i~~~l~~~~-~-~~~~L 325 (397)
T 3oz2_A 256 -----QDIQL--VTGGVSV-SKVKMPITMPGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTKEAIESND-Y-SPQMM 325 (397)
T ss_dssp -----EEEEE--EEEEEEC-CCCCSCCEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTC-C-SHHHH
T ss_pred -----ceeee--eeccccc-cCcccceeeeeEEEcccccccCCCCcchhHHHHHHHHHHHHHHHHHHHHcCC-c-cHHHH
Confidence 00011 1111222 1233557789999999999999999999999999999999999999998774 3 47899
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHh
Q 010225 444 KKYEAERKPANIVMMAVLDGFQKAYSVDFGPLNILRAAAFHGA 486 (514)
Q Consensus 444 ~~Y~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~~~ 486 (514)
+.|++.++++..............+..-+. ..++.++..+
T Consensus 326 ~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 365 (397)
T 3oz2_A 326 QKYEKLIKERFERKHLRNWVAKEKLAMLSD---DTLDKLVDIV 365 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCCH---HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCH---HHHHHHHHHH
Confidence 999999998887666555444444433221 2344455544
No 19
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=100.00 E-value=3.3e-35 Score=302.45 Aligned_cols=337 Identities=12% Similarity=0.117 Sum_probs=242.4
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhh
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQH 133 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~ 133 (514)
.++||+||||||+|+++|+.|++. |++|+|||+++.+. ...|..+.+.+..+|+.+|+++.+...
T Consensus 4 ~~~dVvIIGgG~aGl~~A~~La~~----G~~V~v~E~~~~~~-----------~~~g~~~~~~~~~~l~~~g~~~~~~~~ 68 (421)
T 3nix_A 4 EKVDVLVIGAGPAGTVAASLVNKS----GFKVKIVEKQKFPR-----------FVIGESLLPRCMEHLDEAGFLDAVKAQ 68 (421)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTT----TCCEEEECSSCSSC-----------CCSCCBCCGGGHHHHHHTTCHHHHHHT
T ss_pred ccCcEEEECCCHHHHHHHHHHHhC----CCCEEEEeCCCCCC-----------CcccCcccHhHHHHHHHcCChHHHHHc
Confidence 458999999999999999999996 99999999998652 244678899999999999999998887
Q ss_pred hccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCC
Q 010225 134 RHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTP 213 (514)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~ 213 (514)
.........+..........+..........++.++|..|.+.|.+.+++.| ++|+++++|++++..
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~g-v~i~~~~~v~~i~~~------------ 135 (421)
T 3nix_A 69 GFQQKFGAKFVRGKEIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQG-VDVEYEVGVTDIKFF------------ 135 (421)
T ss_dssp TCEEECEEEEEETTEEEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHT-CEEECSEEEEEEEEE------------
T ss_pred CCcccCCcEEEeCCeeEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCC-CEEEcCCEEEEEEEe------------
Confidence 6544445555444333333333333334556789999999999999999887 999999999999871
Q ss_pred ccccccccCCeeEEEeCCCc--EEEeeE-EEecCCCchhhhhhCCCccCCCCCceEEEEEEEecCCC-----cceEEE--
Q 010225 214 SATTLFTKGHLAKLDLSDGT--SLYAKL-VGADGGKSRVRELAGFKTTGWSYSQNAIICTVEHNKEN-----YCAWQR-- 283 (514)
Q Consensus 214 ~~~~~~~~~~~~~v~~~~g~--~~~ad~-V~AdG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-- 283 (514)
+++..+.+...+|+ +++||+ |+|||.+|.+|+.++.+.....+....+...+....+. ......
T Consensus 136 ------~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (421)
T 3nix_A 136 ------GTDSVTTIEDINGNKREIEARFIIDASGYGRVIPRMFGLDKPSGFESRRTLFTHIKDVKRPVAAEMEGNRITAV 209 (421)
T ss_dssp ------TTEEEEEEEETTSCEEEEEEEEEEECCGGGCHHHHHTTCEECCSSCCCEEEEEEEECTTCCC----CCSEEEEE
T ss_pred ------CCEEEEEEEcCCCCEEEEEcCEEEECCCCchhhHHhcCCCCCCcCCCcEEEEEEECCCcCCCccCCCCeEEEEE
Confidence 01123566678887 799999 99999999999999887776666666776666543221 111112
Q ss_pred -ecCCCceEEeecCCCceEEEEEcCccchHHhhCCCHHHHHHHHHHhhcCCCCCCCCCCCCCccccccccccCccccccc
Q 010225 284 -FLPAGPIALLPIGDNFSNIVWTMNPKDASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKE 362 (514)
Q Consensus 284 -~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (514)
..+.+++|++|.+++..++.+....+..... ..+.+++...+...++ . +...+...
T Consensus 210 ~~~~~g~~~~~P~~~~~~~vg~~~~~~~~~~~-~~~~~~~l~~~~~~~p-----~-----------~~~~l~~~------ 266 (421)
T 3nix_A 210 VHKPKVWIWVIPFSNGNTSVGFVGEPSYFDEY-TGTPEERMRAMIANEG-----H-----------IAERFKSE------ 266 (421)
T ss_dssp EEETTEEEEEEECTTSEEEEEEEECHHHHTTS-CSCHHHHHHHHHHTCT-----T-----------THHHHTTC------
T ss_pred eCCCCEEEEEEEECCCCEEEEEEecHHHhhhc-CCCHHHHHHHHHHhCc-----H-----------HHHHHhcC------
Confidence 2377899999999999999888765433222 2355555555544221 1 11111110
Q ss_pred cccCCCceeeeccceeeeecccccccccccCcEEEEcccccccCCcccccchhhhHHHHHHHHHHHHhhhcCCCcchHHH
Q 010225 363 CFEVPPRVVKLASERMVFPLSLKHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASL 442 (514)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~LvGDAAh~~~P~~GqG~~~al~da~~La~~l~~~~~~~~~~~~~~~ 442 (514)
........++.......++..++++++|||||.++|+.|||+++|++||..|+++|.+.++.+. ...
T Consensus 267 ---------~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAa~~~~P~~G~G~~~A~~~a~~la~~l~~~~~~~~----~~~ 333 (421)
T 3nix_A 267 ---------EFLFEPRTIEGYAISASKLYGDGFVLTGNATEFLDPIFSSGATFAMESGSKGGKLAVQFLKGEE----VNW 333 (421)
T ss_dssp ---------CBSSCCEEEECCCBEESCSEETTEEECGGGTCBCCSTTCCHHHHHHHHHHHHHHHHHHHHTTCC----CCH
T ss_pred ---------ccccCceeecccceeeeeeccCCEEEecccccccCCcccccHHHHHHHHHHHHHHHHHHhcCCc----hhH
Confidence 0112223455555567778889999999999999999999999999999999999999886542 236
Q ss_pred HHHHHHHhhHHHHHHHHH
Q 010225 443 LKKYEAERKPANIVMMAV 460 (514)
Q Consensus 443 l~~Y~~~r~~~~~~~~~~ 460 (514)
+..|.+.++.........
T Consensus 334 ~~~y~~~~~~~~~~~~~~ 351 (421)
T 3nix_A 334 EKDFVEHMMQGIDTFRSF 351 (421)
T ss_dssp HHHTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 778888887765544443
No 20
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=100.00 E-value=4.9e-34 Score=291.27 Aligned_cols=339 Identities=17% Similarity=0.161 Sum_probs=231.4
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhhh
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (514)
++||+||||||+|+++|+.|++. |++|+|||+++.++. ....+..++ .+.++.+|+++.....
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~----G~~V~l~E~~~~~g~---------~~~~~~~~~---~~~~~~lg~~~~~~~~- 66 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKY----GLKTLMIEKRPEIGS---------PVRCGEGLS---KGILNEADIKADRSFI- 66 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSSTTC---------SCCSCCEEE---THHHHHTTCCCCTTTE-
T ss_pred cCCEEEECcCHHHHHHHHHHHHC----CCCEEEEeCCCCCCC---------CcccccccC---HHHHHHcCCCCChHHh-
Confidence 58999999999999999999996 999999999986532 112233333 3567888886552221
Q ss_pred ccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCc
Q 010225 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (514)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~ 214 (514)
......+.+++..+.....+..... ....++.++|..|.+.|.+.+++.| ++|+++++|++++.
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~L~~~~~~~g-v~i~~~~~v~~i~~-------------- 130 (397)
T 3cgv_A 67 ANEVKGARIYGPSEKRPIILQSEKA-GNEVGYVLERDKFDKHLAALAAKAG-ADVWVKSPALGVIK-------------- 130 (397)
T ss_dssp EEEESEEEEECTTCSSCEEEC------CCCEEEECHHHHHHHHHHHHHHHT-CEEESSCCEEEEEE--------------
T ss_pred hhhcceEEEEcCCCCEEEEEecccc-CCceeEEEeHHHHHHHHHHHHHhCC-CEEEECCEEEEEEE--------------
Confidence 2245667777665543234333222 2456889999999999999999877 99999999999987
Q ss_pred cccccccCCeeE-EEe---CCCcEEEeeE-EEecCCCchhhhhhCCCc-cCCCC-CceEEEEEEEec-CCCcceEEEe--
Q 010225 215 ATTLFTKGHLAK-LDL---SDGTSLYAKL-VGADGGKSRVRELAGFKT-TGWSY-SQNAIICTVEHN-KENYCAWQRF-- 284 (514)
Q Consensus 215 ~~~~~~~~~~~~-v~~---~~g~~~~ad~-V~AdG~~S~vR~~l~~~~-~~~~~-~~~~~~~~~~~~-~~~~~~~~~~-- 284 (514)
.++.+. |.+ .++.+++||+ |+|||.+|.+|+.++... ..... ....+...+... .+......++
T Consensus 131 ------~~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (397)
T 3cgv_A 131 ------ENGKVAGAKIRHNNEIVDVRAKMVIAADGFESEFGRWAGLKSVILARNDIISALQYRMINVDVDPDYTDFYLGS 204 (397)
T ss_dssp ------ETTEEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHHTCCTTCCCGGGEEEEEEEEEESCCCCTTEEEEECST
T ss_pred ------eCCEEEEEEEEECCeEEEEEcCEEEECCCcchHhHHhcCCCccCCChhheeEEEEEEeccCCCCCCcEEEEeCC
Confidence 334444 655 3456899999 999999999999997665 32111 111222223222 2222222222
Q ss_pred -cCCCceEEeecCCCceEEEEEcCccchHHhhCCCHHHHHHHHHHhhcCCCCCCCCCCCCCccccccccccCcccccccc
Q 010225 285 -LPAGPIALLPIGDNFSNIVWTMNPKDASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKEC 363 (514)
Q Consensus 285 -~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (514)
.+.+++|++|.+++..++.|....... .......+.+.+.+. .. + .+.
T Consensus 205 ~~~~g~~~~~P~~~~~~~vg~~~~~~~~-----~~~~~~~~~l~~~~~-~~-~-----------~~~------------- 253 (397)
T 3cgv_A 205 IAPAGYIWVFPKGEGMANVGIGSSINWI-----HNRFELKNYLDRFIE-NH-P-----------GLK------------- 253 (397)
T ss_dssp TSTTEEEEEEEEETTEEEEEEEEETTTC-----SCHHHHHHHHHHHHH-TC-H-----------HHH-------------
T ss_pred cCCCceEEEEECCCCeEEEEEEeccccc-----cCCCCHHHHHHHHHH-hC-c-----------CCC-------------
Confidence 577899999999998888887765431 111222222222111 00 0 000
Q ss_pred ccCCCceeeeccceeeeecccccccccccCcEEEEcccccccCCcccccchhhhHHHHHHHHHHHHhhhcCCCcchHHHH
Q 010225 364 FEVPPRVVKLASERMVFPLSLKHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLL 443 (514)
Q Consensus 364 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~LvGDAAh~~~P~~GqG~~~al~da~~La~~l~~~~~~~~~~~~~~~l 443 (514)
. ..+.+ .....+|+. ...++|..+|++++|||||.++|++|||+|+|++||..|++.|.+++..+.. ...+|
T Consensus 254 --~-~~~~~--~~~~~~p~~-~~~~~~~~~~v~liGDAa~~~~P~~G~G~~~a~~~a~~la~~l~~~~~~~~~--~~~~l 325 (397)
T 3cgv_A 254 --K-GQDIQ--LVTGGVSVS-KVKMPITMPGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTKEAIESNDY--SPQMM 325 (397)
T ss_dssp --T-SEEEE--EEEEEEECC-CCCSCCEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTCC--SHHHH
T ss_pred --C-CeEEe--eeeeeeecC-CCccceeeCCEEEEEccccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCc--cHHHH
Confidence 0 00111 122346654 3467788899999999999999999999999999999999999998866542 47899
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHhhcCC
Q 010225 444 KKYEAERKPANIVMMAVLDGFQKAYSVD 471 (514)
Q Consensus 444 ~~Y~~~r~~~~~~~~~~~~~~~~~~~~~ 471 (514)
+.|++.|+++....+..++.+.+++..-
T Consensus 326 ~~Y~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (397)
T 3cgv_A 326 QKYEKLIKERFERKHLRNWVAKEKLAML 353 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999988887653
No 21
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=100.00 E-value=1.8e-34 Score=299.65 Aligned_cols=334 Identities=17% Similarity=0.155 Sum_probs=227.5
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhh
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQH 133 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~ 133 (514)
+++||+||||||+|+++|+.|++. |++|+|||+.+.+... ....+..+ +...|+.+|+++.....
T Consensus 5 ~~~dVvIVGaG~aGl~aA~~La~~----G~~V~vlE~~~~~~~g--------~~~~g~~l---~~~~l~~lg~~~~~~~~ 69 (453)
T 3atr_A 5 LKYDVLIIGGGFAGSSAAYQLSRR----GLKILLVDSKPWNRIG--------DKPCGDAV---SKAHFDKLGMPYPKGEE 69 (453)
T ss_dssp EECSEEEECCSHHHHHHHHHHSSS----SCCEEEECSSCGGGTT--------CSCCCCEE---EHHHHHHTTCCCCCGGG
T ss_pred CcCCEEEECcCHHHHHHHHHHHHC----CCCEEEEECCCCCCCC--------cccccccc---cHHHHHHhcCCCCchHH
Confidence 468999999999999999999996 9999999998864210 11223344 56788888876543221
Q ss_pred hccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCC
Q 010225 134 RHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTP 213 (514)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~ 213 (514)
.......+.++.........+ ...++.++|..|.+.|.+.+.+.| ++|+++++|++++.
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~i~r~~l~~~L~~~a~~~g-v~i~~~~~v~~i~~------------- 128 (453)
T 3atr_A 70 LENKINGIKLYSPDMQTVWTV-------NGEGFELNAPLYNQRVLKEAQDRG-VEIWDLTTAMKPIF------------- 128 (453)
T ss_dssp EEEEEEEEEEECTTSSCEEEE-------EEEEEEECHHHHHHHHHHHHHHTT-CEEESSEEEEEEEE-------------
T ss_pred HHhhhcceEEECCCCceEEeE-------CCCcEEEcHHHHHHHHHHHHHHcC-CEEEeCcEEEEEEE-------------
Confidence 122334455554443222222 124688999999999999999876 99999999999986
Q ss_pred ccccccccCCeeE-EEeC---CCc--EEEeeE-EEecCCCchhhhhhCCCcc--CCCC---CceEEEEEEEecCCC--cc
Q 010225 214 SATTLFTKGHLAK-LDLS---DGT--SLYAKL-VGADGGKSRVRELAGFKTT--GWSY---SQNAIICTVEHNKEN--YC 279 (514)
Q Consensus 214 ~~~~~~~~~~~~~-v~~~---~g~--~~~ad~-V~AdG~~S~vR~~l~~~~~--~~~~---~~~~~~~~~~~~~~~--~~ 279 (514)
+++.+. |.+. +|+ +++||+ |+|||.+|.+|+.++...+ ...+ ...++...+....+. ..
T Consensus 129 -------~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (453)
T 3atr_A 129 -------EDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSRSFRSKLPPELPITEDLDDKDADVAYREVLLTKEDIEDHD 201 (453)
T ss_dssp -------ETTEEEEEEEEETTTTEEEEEECSEEEECCGGGCTTGGGSCTTSGGGCCCCGGGEEEEEEEEEEESSCCTTTT
T ss_pred -------ECCEEEEEEEEEcCCCceEEEEcCEEEECcCCchhhHHhcCCCCCcccCCCcccceeeeEEEEecCCCccCCC
Confidence 223332 4443 676 799999 9999999999999976542 1111 134455555554332 12
Q ss_pred eE-EEe----cCCCceEEeecCCCceEEEEEcCccchHHhhCCCHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccccc
Q 010225 280 AW-QRF----LPAGPIALLPIGDNFSNIVWTMNPKDASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRG 354 (514)
Q Consensus 280 ~~-~~~----~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (514)
.. .++ .+++++|++|.+++..++++........ ....+.+.+.+.+..+ .|. +
T Consensus 202 ~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~~~~~~~~~---~~~~~~~~~~l~~~~~-~~~------------------~ 259 (453)
T 3atr_A 202 YLRIFIDQETSPGGYWWYFPKGKNKVNVGLGIQGGMGY---PSIHEYYKKYLDKYAP-DVD------------------K 259 (453)
T ss_dssp EEEEECCTTTSTTSCEEEEEEETTEEEEEEEEESSSCC---CCHHHHHHHHHHHHCT-TEE------------------E
T ss_pred eEEEEECCCCCCCcEEEEEECCCCeEEEEEEecCCCCC---CCHHHHHHHHHHhhhh-hcC------------------C
Confidence 22 222 2678999999999988888776533210 0123444444433111 000 0
Q ss_pred CccccccccccCCCceeeeccceeeeecccccccccccCcEEEEcccccccCCcccccchhhhHHHHHHHHHHHHhhhcC
Q 010225 355 DATLSAKECFEVPPRVVKLASERMVFPLSLKHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVG 434 (514)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~LvGDAAh~~~P~~GqG~~~al~da~~La~~l~~~~~~~ 434 (514)
. .+.+.. ....|. ..+.++|..+|++|+|||||.++|++|||+|+||+||..||++|.++++.+
T Consensus 260 ~-------------~~~~~~--~~~~p~-~~~~~~~~~~~v~lvGDAAh~~~P~~G~G~~~Ai~da~~la~~l~~~l~~~ 323 (453)
T 3atr_A 260 S-------------KLLVKG--GALVPT-RRPLYTMAWNGIIVIGDSGFTVNPVHGGGKGSAMISGYCAAKAILSAFETG 323 (453)
T ss_dssp E-------------EEEEEE--EEEEEC-SSCCSCSEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred C-------------eEEecc--ceeccC-CCCCCceecCCEEEEeCcccCCCCCccccHHHHHHHHHHHHHHHHHHHHcC
Confidence 0 011111 112343 345677888999999999999999999999999999999999999987655
Q ss_pred CCcchHHHHHHHHHHhhHHHHHHHHHHHHHHHhhcC
Q 010225 435 ADIGEASLLKKYEAERKPANIVMMAVLDGFQKAYSV 470 (514)
Q Consensus 435 ~~~~~~~~l~~Y~~~r~~~~~~~~~~~~~~~~~~~~ 470 (514)
+. ...+|+.|+++|++++...+..++.+.+++..
T Consensus 324 -~~-~~~~L~~Y~~~r~~~~~~~~~~~~~~~~~~~~ 357 (453)
T 3atr_A 324 -DF-SASGLWDMNICYVNEYGAKQASLDIFRRFLQK 357 (453)
T ss_dssp -CC-STTTTTHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred -Cc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 32 25689999999999999999999888888764
No 22
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=100.00 E-value=2.1e-34 Score=292.61 Aligned_cols=337 Identities=12% Similarity=0.100 Sum_probs=217.2
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCc-HH-HHhh
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAW-QY-VQQH 133 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~-~~-~~~~ 133 (514)
.||+||||||+||++|+.|++.. .|++|+||||.+.+ ...+++..+++++.+.+...+++ +. +...
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~--~G~~V~v~E~~~~~----------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQAR--PLWAIDIVEKNDEQ----------EVLGWGVVLPGRPGQHPANPLSYLDAPERLN 68 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC--TTSEEEEECSSCTT----------CCCCSEEEEESCTTTCTTCGGGGSSCGGGGC
T ss_pred CeEEEECCCHHHHHHHHHHHhcC--CCCCEEEEECCCCC----------CcceeEEEeCcHHHHhhcCcchhhhhhHHHh
Confidence 48999999999999999999931 18999999999876 23456788888776622222333 32 3222
Q ss_pred hccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCC
Q 010225 134 RHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTP 213 (514)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~ 213 (514)
.. ....+.++. .+. ... . ......+.++|..|.+.|.+.+++.| ++|+++++|++++.
T Consensus 69 ~~-~~~~~~~~~-~g~-~~~--~---~~~~~~~~~~r~~l~~~L~~~~~~~g-v~i~~~~~v~~i~~------------- 126 (381)
T 3c4a_A 69 PQ-FLEDFKLVH-HNE-PSL--M---STGVLLCGVERRGLVHALRDKCRSQG-IAIRFESPLLEHGE------------- 126 (381)
T ss_dssp CE-EECCEEEEE-SSS-EEE--C---CCCSCEEEEEHHHHHHHHHHHHHHTT-CEEETTCCCCSGGG-------------
T ss_pred hc-cccceEEEe-CCe-eEE--e---cCCCceeeecHHHHHHHHHHHHHHCC-CEEEeCCEeccchh-------------
Confidence 11 334455555 221 111 1 11223468999999999999999886 99999999998853
Q ss_pred ccccccccCCeeEEEeCCCcEEEeeE-EEecCCCchhhhhhCCCccCC--C-CCceEEEEEEEecCCCcceEEEecCCCc
Q 010225 214 SATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKSRVRELAGFKTTGW--S-YSQNAIICTVEHNKENYCAWQRFLPAGP 289 (514)
Q Consensus 214 ~~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S~vR~~l~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 289 (514)
. .+++||+ |+|||.+|. |+.+....... . +....+.+.... .+....+..+.+.|+
T Consensus 127 ---------~---------~~~~ad~vV~AdG~~S~-R~~l~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~ 186 (381)
T 3c4a_A 127 ---------L---------PLADYDLVVLANGVNHK-TAHFTEALVPQVDYGRNKYIWYGTSQL-FDQMNLVFRTHGKDI 186 (381)
T ss_dssp ---------C---------CGGGCSEEEECCGGGGG-TCCSSGGGCCCCEEEEEEEEEEEESSC-CSSEEEEEEEETTEE
T ss_pred ---------c---------ccccCCEEEECCCCCch-HHhhhhhcCCCcccCCccEEEEecCCC-CCcceeeEeeCCCcE
Confidence 1 1257999 999999999 99873221111 1 122222222211 112222223346666
Q ss_pred eE--EeecCCCceEEEEEcCccch--HHhhCCCHHHHHHHHHHhhcCCCCCCCCCCCCCccccccccccCcccccccccc
Q 010225 290 IA--LLPIGDNFSNIVWTMNPKDA--SDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFE 365 (514)
Q Consensus 290 ~~--~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (514)
++ ++|++++...+.+..+.+.. ......+.+.+.+.+.+.|. .|.+...
T Consensus 187 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~-------------------------- 239 (381)
T 3c4a_A 187 FIAHAYKYSDTMSTFIVECSEETYARARLGEMSEEASAEYVAKVFQ-AELGGHG-------------------------- 239 (381)
T ss_dssp EEEEEEECSSSCEEEEEEECHHHHHHTTSSSSCHHHHHHHHHHHTH-HHHTTCC--------------------------
T ss_pred EEEEEEEecCCeEEEEEECCccccccCCcccCChHHHHHHHHHHhc-ccCCCch--------------------------
Confidence 54 68998877654444332211 11223466777777777664 2211100
Q ss_pred CCCceeeeccceeeeeccc-ccccccccCcEEEEcccccccCCcccccchhhhHHHHHHHHHHHHhhhcCCCcchHHHHH
Q 010225 366 VPPRVVKLASERMVFPLSL-KHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLK 444 (514)
Q Consensus 366 ~~~~~~~~~~~~~~~p~~~-~~~~~~~~~~v~LvGDAAh~~~P~~GqG~~~al~da~~La~~l~~~~~~~~~~~~~~~l~ 444 (514)
+..... ..|++.. .++++|..+||+|+|||||+++|+.|||+|+||+||..|+++|... .+. ..+|+
T Consensus 240 ----l~~~~~--~~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~GqG~~~al~Da~~La~~L~~~----~~~--~~aL~ 307 (381)
T 3c4a_A 240 ----LVSQPG--LGWRNFMTLSHDRCHDGKLVLLGDALQSGHFSIGHGTTMAVVVAQLLVKALCTE----DGV--PAALK 307 (381)
T ss_dssp ----CBCCTT--TCSEEEEECCCSCSEETTEEECGGGTCCCCGGGCCHHHHHHHHHHHHHHHHHHS----SSH--HHHHH
T ss_pred ----hhcCCC--cceeeeccccCCCcccCCEEEEEccccccCCCccccHHHHHHHHHHHHHHHhcc----ccH--HHHHH
Confidence 000000 1233332 3467888999999999999999999999999999999999999874 233 78999
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHhhcCC-----CchHHHHHHHHHHH
Q 010225 445 KYEAERKPANIVMMAVLDGFQKAYSVD-----FGPLNILRAAAFHG 485 (514)
Q Consensus 445 ~Y~~~r~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~r~~~l~~ 485 (514)
.|+++|++++..++..++.+.+++... .++....|+.++..
T Consensus 308 ~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 353 (381)
T 3c4a_A 308 RFEERALPLVQLFRGHADNSRVWFETVEERMHLSSAEFVQSFDARR 353 (381)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCSCC------CHHHHGGGTT
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhchhhhhcCCHHHHHHHHhhcc
Confidence 999999999999999999998555432 25556777777665
No 23
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=100.00 E-value=1.4e-30 Score=274.79 Aligned_cols=360 Identities=13% Similarity=0.093 Sum_probs=232.8
Q ss_pred CccEEEECCCHHHHHHHHHhcc---CCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHH--
Q 010225 55 QYDVAVVGGGMVGMALACSLAS---MPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQY-- 129 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~---~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~-- 129 (514)
.+||+|||||++|+++|+.|++ . |++|+|||+.+.+ ..+.+..+.+....+++.+|+.+.
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~----G~~V~lvE~~~~~-----------~~~~g~~~~~~~~~~l~~lgi~~~~~ 66 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDD----RIDVTLVESGNVR-----------RIGVGEATFSTVRHFFDYLGLDEREW 66 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGG----GSEEEEEEC------------------CCEECCTTHHHHHHHHTCCHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCC----CCEEEEEecCCCC-----------ceeeccccCcchHHHHHHcCCCHHHH
Confidence 4799999999999999999999 7 8999999998643 223467788889999999999875
Q ss_pred HHhhhccCcceEEEEeCC--Cc------c------eeee------------c----------------------cCCC--
Q 010225 130 VQQHRHAYFDKMQVWDYT--GL------G------YTKY------------N----------------------ARDV-- 159 (514)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~--~~------~------~~~~------------~----------------------~~~~-- 159 (514)
+............+.+.. +. . ...+ . ....
T Consensus 67 ~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (511)
T 2weu_A 67 LPRCAGGYKLGIRFENWSEPGEYFYHPFERLRVVDGFNMAEWWLAVGDRRTSFSEACYLTHRLCEAKRAPRMLDGSLFAS 146 (511)
T ss_dssp HHHTTCEEECEEEEESSSSTTCEEEEESCCCCEETTEEHHHHHHHHC----CHHHHHCHHHHHHHTTBCSBCTTSCBCC-
T ss_pred HHHcCCeEeccceecCCCCCCCceEcCCCCCCCCCCCchHHHHHhccccccCcccccccccCHHHhhhhHHhHhcCCccc
Confidence 444321111112221100 00 0 0000 0 0001
Q ss_pred --C-----------C--cccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCccccccccCCe
Q 010225 160 --N-----------K--EILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHL 224 (514)
Q Consensus 160 --~-----------~--~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (514)
. . ...++.++|..|.+.|.+.+++.| ++++++ +|++++.. +++..
T Consensus 147 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~g-v~~~~~-~v~~i~~~------------------~~~~~ 206 (511)
T 2weu_A 147 QVDESLGRSTLAEQRAQFPYAYHFDADEVARYLSEYAIARG-VRHVVD-DVQHVGQD------------------ERGWI 206 (511)
T ss_dssp -----CCSCCGGGCCSCCSCEEEECHHHHHHHHHHHHHHTT-CEEEEC-CEEEEEEC------------------TTSCE
T ss_pred cccccccccccccCcCCCCeeEEEcHHHHHHHHHHHHHHCC-CEEEEC-eEeEEEEc------------------CCCCE
Confidence 1 1 345788999999999999999877 999999 99999761 02234
Q ss_pred eEEEeCCCcEEEeeE-EEecCCCchhhh-hhCCCccCC---CCCceEEEEEEEecCC---CcceEEEecCCCceEEeecC
Q 010225 225 AKLDLSDGTSLYAKL-VGADGGKSRVRE-LAGFKTTGW---SYSQNAIICTVEHNKE---NYCAWQRFLPAGPIALLPIG 296 (514)
Q Consensus 225 ~~v~~~~g~~~~ad~-V~AdG~~S~vR~-~l~~~~~~~---~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~~~~p~~ 296 (514)
+.|.+.+|+++.||+ |+|||.+|.+++ .++.....+ ......+...++...+ .......+.+.|++|++|.+
T Consensus 207 ~~v~~~~g~~~~ad~vV~A~G~~S~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~ 286 (511)
T 2weu_A 207 SGVHTKQHGEISGDLFVDCTGFRGLLINQTLGGRFQSFSDVLPNNRAVALRVPRENDEDMRPYTTATAMSAGWMWTIPLF 286 (511)
T ss_dssp EEEEESSSCEEECSEEEECCGGGCCCCCCCTCCCEEECTTTCCCCEEEEEEEECSSGGGCCSSEEEEEETTEEEEEEECS
T ss_pred EEEEECCCCEEEcCEEEECCCcchHHHHHHhCCCCccccccCcccceEEEEeccCCCCCCCcceeceecCCCcEEEEECC
Confidence 678888888899999 999999999954 556654322 2223344434443322 12234456688999999998
Q ss_pred CCceEEEEEcCccchHHhhCCCHHHHHHHHHHhhcCCCCCCCCCCCCCccccccccccCccccccccccCCCceeeeccc
Q 010225 297 DNFSNIVWTMNPKDASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVVKLASE 376 (514)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (514)
+ ...+.+..... ..++++..+.+.+.+. +.+. + ..
T Consensus 287 ~-~~~~g~~~~~~------~~~~~~~~~~l~~~~~--~~~~--------------------------------~----~~ 321 (511)
T 2weu_A 287 K-RDGNGYVYSDE------FISPEEAERELRSTVA--PGRD--------------------------------D----LE 321 (511)
T ss_dssp S-EEEEEEEECTT------TSCHHHHHHHHHHHHC--TTCT--------------------------------T----SC
T ss_pred C-ceEEEEEECCC------CCCHHHHHHHHHHHhC--cccc--------------------------------c----cc
Confidence 7 34444433321 1345566666666442 1110 0 00
Q ss_pred eeeeecccccccccccCcEEEEcccccccCCcccccchhhhHHHHHHHHHHHHhhhcCCCcchHHHHHHHHHHhhHHHHH
Q 010225 377 RMVFPLSLKHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKYEAERKPANIV 456 (514)
Q Consensus 377 ~~~~p~~~~~~~~~~~~~v~LvGDAAh~~~P~~GqG~~~al~da~~La~~l~~~~~~~~~~~~~~~l~~Y~~~r~~~~~~ 456 (514)
...+++.....+.+..+||+|||||||.++|+.|||+|+|++||..|+++|.. +.+ ...+|+.|++.|++++..
T Consensus 322 ~~~~~~~~~~~~~~~~~rv~liGDAAh~~~P~~g~G~~~a~~da~~La~~l~~----~~~--~~~~l~~Y~~~~~~~~~~ 395 (511)
T 2weu_A 322 ANHIQMRIGRNERTWINNCVAVGLSAAFVEPLESTGIFFIQHAIEQLVKHFPG----ERW--DPVLISAYNERMAHMVDG 395 (511)
T ss_dssp CEEEECCCEEESCSEETTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHTCCC----TTC--CHHHHHHHHHHHHHHHHH
T ss_pred ceeEEeeccccccccCCCEEEEechhhccCccccccHHHHHHHHHHHHHHhcc----CCC--CHHHHHHHHHHHHHHHHH
Confidence 11123333334567789999999999999999999999999999999998864 222 368999999999999999
Q ss_pred HHHHHHHHHHhhcCCC-chHHHHHHHHHHHhccChhHHHHHHHHhhcCCC
Q 010225 457 MMAVLDGFQKAYSVDF-GPLNILRAAAFHGAQYISPLKRNIISYASGEQR 505 (514)
Q Consensus 457 ~~~~~~~~~~~~~~~~-~~~~~~r~~~l~~~~~~~~~~~~~~~~~~g~~~ 505 (514)
+.......+.+..... ++....+ .+..-..++..+-.+..+...
T Consensus 396 ~~~~~~~~y~~~~r~~~~fw~~~~-----~~~~p~~l~~~~~~~~~~~~~ 440 (511)
T 2weu_A 396 VKEFLVLHYKGAQREDTPYWKAAK-----TRAMPDGLARKLELSASHLLD 440 (511)
T ss_dssp HHHHHHHHHHHCCCCCSHHHHHHH-----HSCCCTTHHHHHHHHTTSCCC
T ss_pred HHHHHHHHhhhcCCCCcHHHHhcc-----cCCCCHHHHHHHHHHHhCCCc
Confidence 9998888887665443 3322222 233334666666666555444
No 24
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=100.00 E-value=1e-30 Score=276.33 Aligned_cols=335 Identities=16% Similarity=0.118 Sum_probs=223.2
Q ss_pred CCccEEEECCCHHHHHHHHHhcc------------CCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHH
Q 010225 54 DQYDVAVVGGGMVGMALACSLAS------------MPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFF 121 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~------------~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l 121 (514)
..+||+||||||+|+++|+.|++ . |++|+|||+.+.+ ..+.+..+.+++..+|
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~----G~~V~liE~~~~~-----------~~g~g~~~~p~~~~~l 70 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSP----KLNITLIESPDVA-----------TIGVGEGTWPSMRSTL 70 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSC----SCEEEEEECSSCC-----------CCCSCEECCTHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCC----CCeEEEEeCCCCC-----------CcceeeechHhHHHHH
Confidence 56899999999999999999999 6 9999999997654 1233788999999999
Q ss_pred HHcCCcHH--HHhhhccCcceEEEEeCCC-------cc------------eeeecc------------------------
Q 010225 122 KEIGAWQY--VQQHRHAYFDKMQVWDYTG-------LG------------YTKYNA------------------------ 156 (514)
Q Consensus 122 ~~lgl~~~--~~~~~~~~~~~~~~~~~~~-------~~------------~~~~~~------------------------ 156 (514)
+.+|+.+. +..........+.+.+... .. ...+..
T Consensus 71 ~~lGi~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~v~~q~~~~~~ 150 (526)
T 2pyx_A 71 SKIGIDENDFIRQCDASFKQGSRFINWCKDPQSNVADSYLHPFSLPHGHQELDLCPYWLPHAEQVSFAEAVCSQQVLTQL 150 (526)
T ss_dssp HHHTCCHHHHHHHTTCEEECEEEEESCSSCCBTTBCCEEEEESSCCTTTTTCCCHHHHGGGTTTSCHHHHHCSHHHHHHT
T ss_pred HHcCCCHHHHHHHcCCEEECCCcccCCCccccCCCCCceecCCCCCCCCCCCChhHHHHhhhhccCchhhcccccchhhh
Confidence 99999986 4544332223333321110 00 000100
Q ss_pred ---------CCC-CCcccEEEEehHHHHHHHHHHHhc-CCCceEEcCCeeEEEeeCCCCCCcccCCCCccccccccCCee
Q 010225 157 ---------RDV-NKEILGCVVENKVLHSSLLSCMQN-TEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLA 225 (514)
Q Consensus 157 ---------~~~-~~~~~~~~i~r~~l~~~L~~~~~~-~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (514)
... .....++.++|..|.+.|.+.+++ .| ++++++ +|++++.. +++..+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~a~~~~G-v~i~~~-~v~~i~~~------------------~~g~~~ 210 (526)
T 2pyx_A 151 GLAPKSIVTAQYHFQNNYGYHLNAAKFSQLLTEHCTQKLG-VTHIRD-HVSQIINN------------------QHGDIE 210 (526)
T ss_dssp TBCSSCTTSCTTCCSSCCEEEECHHHHHHHHHHHHHHTSC-CEEEEC-CEEEEEEC------------------TTSCEE
T ss_pred ccchhhhhccccCCCCCeeEEEcHHHHHHHHHHHHHhcCC-CEEEEe-EEEEEEec------------------CCCcEE
Confidence 000 122346889999999999999998 66 999999 69999761 012345
Q ss_pred EEEeCCCcEEEeeE-EEecCCCchh-hhhhCCCccCCCC---CceEEEEEEEecC----CCcceEEEecCCCceEEeecC
Q 010225 226 KLDLSDGTSLYAKL-VGADGGKSRV-RELAGFKTTGWSY---SQNAIICTVEHNK----ENYCAWQRFLPAGPIALLPIG 296 (514)
Q Consensus 226 ~v~~~~g~~~~ad~-V~AdG~~S~v-R~~l~~~~~~~~~---~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~p~~ 296 (514)
.|.+.+|.++.||+ |+|||.+|.+ |+.++.....+.. ...++...+.... ........+.+.|++|++|++
T Consensus 211 ~v~~~~g~~i~ad~vV~AdG~~S~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~pl~ 290 (526)
T 2pyx_A 211 KLITKQNGEISGQLFIDCTGAKSLLLGEHLQVPFLSQKSVLFNDRALAIQVPYSDANSPIASCTHSTAQPNGWIWDIGLP 290 (526)
T ss_dssp EEEESSSCEEECSEEEECSGGGCCCCCCCTCCCEEECHHHHCCCEEEEEEEECSSTTCCCCSSEEEEEETTEEEEEEECS
T ss_pred EEEECCCCEEEcCEEEECCCcchHHHHHHhCCCcccccccccCccEEEEEeeccCCCCCCCCceeEEecCCCeEEEeeCC
Confidence 77888877899999 9999999999 6667765432221 2234444444332 112223335578899999998
Q ss_pred CCceEEEEEcCccchHHhhCCCHHHHHHHHHHhhcCCCCCCCCCCCCCccccccccccCccccccccccCCCceeeeccc
Q 010225 297 DNFSNIVWTMNPKDASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVVKLASE 376 (514)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (514)
++.. +.+...... .+.++..+.+.+.+. .+++ .+. . ..
T Consensus 291 ~~~~-~~~v~~~~~------~~~~~~~~~l~~~l~-~~~~-----------~l~----------------------~-~~ 328 (526)
T 2pyx_A 291 TRKG-VGYVYSSSH------TNDIDAQKTLFNYLG-VDGA-----------AAD----------------------K-LE 328 (526)
T ss_dssp SEEE-EEEEECTTT------CCHHHHHHHHHHHHT-CCHH-----------HHH----------------------H-CC
T ss_pred CceE-EEEEecCCC------CChHHHHHHHHHHHH-hcCc-----------ccc----------------------c-CC
Confidence 7533 333332211 233444555555443 1100 000 0 01
Q ss_pred eeeeecccccccccccCcEEEEcccccccCCcccccchhhhHHHHHHHHHHHHhhhcCCCcchHHHHHHHHHHhhHHHHH
Q 010225 377 RMVFPLSLKHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKYEAERKPANIV 456 (514)
Q Consensus 377 ~~~~p~~~~~~~~~~~~~v~LvGDAAh~~~P~~GqG~~~al~da~~La~~l~~~~~~~~~~~~~~~l~~Y~~~r~~~~~~ 456 (514)
...+++.....+++..+||+|+|||||.++|+.|||+|+|++||..|+++|.... + ....+++.|+++|++++..
T Consensus 329 ~~~~~~~~~~~~~~~~grv~LiGDAAh~~~P~~GqGi~~ai~da~~La~~L~~~~----~-~~~~~l~~Y~~~~~~~~~~ 403 (526)
T 2pyx_A 329 PRQLAINPGYRAKCWQNNCIAIGMAAGFIEPLEASALALIEWTASTLAQQLPPNR----M-VMDTISARVNERYQQHWQQ 403 (526)
T ss_dssp CEEEECCCEEESCSEETTEEECGGGTEECCCTTCHHHHHHHHHHHHHHHTCCSCH----H-HHHHHHHHHHHHHHHHHHH
T ss_pred ceEEecccCccccccCCCEEEEEhhhcccCccccccHHHHHHHHHHHHHHhhhcC----C-cCHHHHHHHHHHHHHHHHH
Confidence 1134444445667788999999999999999999999999999999999886311 1 1367999999999999999
Q ss_pred HHHHHHHHHHhhcC
Q 010225 457 MMAVLDGFQKAYSV 470 (514)
Q Consensus 457 ~~~~~~~~~~~~~~ 470 (514)
+.......+.+-..
T Consensus 404 ~~~~~~~~y~~~~r 417 (526)
T 2pyx_A 404 IIDFLKLHYVISQR 417 (526)
T ss_dssp HHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHhcCC
Confidence 88877777765443
No 25
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.97 E-value=4.9e-30 Score=273.43 Aligned_cols=347 Identities=11% Similarity=0.072 Sum_probs=212.4
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCC--CCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHH
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPL--TKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQ 131 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~--~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~ 131 (514)
+++||+||||||+||++|+.|++... ..|++|+||||++.++. ....+..+.+++++.| ++ .+.
T Consensus 34 ~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~---------~~~~g~~l~~~~l~~l--l~---~~~ 99 (584)
T 2gmh_A 34 EEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGA---------HTLSGACLDPRAFEEL--FP---DWK 99 (584)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTT---------TCCCCCEECTHHHHHH--CT---THH
T ss_pred cCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCC---------ccccccccCHHHHHHH--HH---HHH
Confidence 46899999999999999999998300 01899999999987632 1233556888877665 33 222
Q ss_pred hhhccCcc------eEEEEeCCCcceeeecc-CC-CCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCC
Q 010225 132 QHRHAYFD------KMQVWDYTGLGYTKYNA-RD-VNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPS 203 (514)
Q Consensus 132 ~~~~~~~~------~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~ 203 (514)
..+. ++. .+.+..... ...++. .. .......+.++|..|.++|.+.+++.| ++|+++++|+++..++
T Consensus 100 ~~g~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~G-v~i~~g~~v~~l~~~~- 174 (584)
T 2gmh_A 100 EKGA-PLNTPVTEDRFGILTEKY--RIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALG-VEVYPGYAAAEILFHE- 174 (584)
T ss_dssp HHTC-CCCEECCEEEEEEECSSC--EEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTT-CEEETTCCEEEEEECT-
T ss_pred hcCC-ceeeeechhheeeeccCC--CccccccCccccccCCCEEEeHHHHHHHHHHHHHHcC-CEEEcCCEEEEEEEcC-
Confidence 2222 221 233333321 122220 01 112233688999999999999999987 9999999999998721
Q ss_pred CCCcccCCCCccccccccCCeeEEEeC------C---------CcEEEeeE-EEecCCCchhhhhh----CCCccCCCCC
Q 010225 204 SSSISVDSTPSATTLFTKGHLAKLDLS------D---------GTSLYAKL-VGADGGKSRVRELA----GFKTTGWSYS 263 (514)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~v~~~------~---------g~~~~ad~-V~AdG~~S~vR~~l----~~~~~~~~~~ 263 (514)
++..+.|.+. + |.+++||+ |+|||.+|.+|+.+ +.........
T Consensus 175 -----------------~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~vr~~l~~~~gl~~~~~p~~ 237 (584)
T 2gmh_A 175 -----------------DGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLRANCEPQT 237 (584)
T ss_dssp -----------------TSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCHHHHHHHHHTTTTTTSCCCC
T ss_pred -----------------CCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCchHHHHHHHHhCCCCCCCchh
Confidence 1122335544 2 46899999 99999999999887 4433211110
Q ss_pred -ceEEEEEEEecC--CC-cceEEEec------CCCceEEeecC--CCceEEEEEcCccchHHhhCCCHHHHHHHHHHhhc
Q 010225 264 -QNAIICTVEHNK--EN-YCAWQRFL------PAGPIALLPIG--DNFSNIVWTMNPKDASDCKSMNEDDFVKILNHALD 331 (514)
Q Consensus 264 -~~~~~~~~~~~~--~~-~~~~~~~~------~~g~~~~~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (514)
...+...+..+. .. ......+. ..+..+++|.. ++..+++|......... ..++.+ .+.....
T Consensus 238 ~g~g~~~~~~v~~~~~~~~~~~~~~g~~~~~~~~gg~~~~~~~~~~~~~~vg~~~~~~~~~~--~~~~~~---~l~~~~~ 312 (584)
T 2gmh_A 238 YGIGLKELWVIDEKKWKPGRVDHTVGWPLDRHTYGGSFLYHLNEGEPLLALGFVVGLDYQNP--YLSPFR---EFQRWKH 312 (584)
T ss_dssp EEEEEEEEEECCGGGCCTTEEEEEEETTSCTTSCEEEEEEECCSSSCEEEEEEEEETTCCCT--TCCHHH---HHHHHTT
T ss_pred HHhhhhhheecCcccccCCeEEEEEeccccCCcCCceEEEEecCCCCeEEEEEEEecCcccc--cCChHH---HHHHHHh
Confidence 112222223322 11 22222221 12446778887 78888888765433111 112211 1222110
Q ss_pred CCCCCCCCCCCCCccccccccccCccccccccccCCCceeeeccceeeeecccccccccccCcEEEEcccccccCCcccc
Q 010225 332 YGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVVKLASERMVFPLSLKHANNYVSKRVVLIGDAAHTVHPLAGQ 411 (514)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~LvGDAAh~~~P~~Gq 411 (514)
.+ .+..++... ++.. ...+..++......++|..+|++|||||||.++|+.||
T Consensus 313 ---~p-----------~i~~~l~~~------------~~~~-~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~Gq 365 (584)
T 2gmh_A 313 ---HP-----------SIKPTLEGG------------KRIA-YGARALNEGGFQSIPKLTFPGGLLIGCSPGFMNVPKIK 365 (584)
T ss_dssp ---ST-----------TTHHHHTTC------------EEEE-EEEEEEECCGGGGCCCCEETTEEECTTTTCCCBTTTTB
T ss_pred ---Ch-----------HHHHHhCCC------------eEEE-ecceEccCCCcccCCccccCCEEEEcccccccCccccc
Confidence 01 111111100 0010 01111234344456778889999999999999999999
Q ss_pred cchhhhHHHHHHHHHHHHhhhcCC-CcchHHH---HHHHHHHhhHH-HHHHHHHHHHHHHhhcC
Q 010225 412 GVNLGFGDASTLSRIIAEGIAVGA-DIGEASL---LKKYEAERKPA-NIVMMAVLDGFQKAYSV 470 (514)
Q Consensus 412 G~~~al~da~~La~~l~~~~~~~~-~~~~~~~---l~~Y~~~r~~~-~~~~~~~~~~~~~~~~~ 470 (514)
|+|+||+||..||++|..+++.+. +. ..+ |+.|+++|+++ +.+.+..++.+..+|+.
T Consensus 366 G~~~Ai~da~~LA~~L~~~~~~g~~~~--~~a~~~L~~Ye~~r~~~~v~~~l~~~r~~~~~~~~ 427 (584)
T 2gmh_A 366 GTHTAMKSGTLAAESIFNQLTSENLQS--KTIGLHVTEYEDNLKNSWVWKELYSVRNIRPSCHG 427 (584)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTCCCCCC--SSSSCCCTHHHHHHHTSHHHHHHHHTTTTTGGGGS
T ss_pred cHHHHHHHHHHHHHHHHHHHHcCCcch--hhhhhhHHHHHHHHHHhHHHHHHHHHhChhHHHHH
Confidence 999999999999999999886442 22 343 89999999988 57888888888887754
No 26
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.97 E-value=1.1e-29 Score=269.13 Aligned_cols=327 Identities=13% Similarity=0.123 Sum_probs=217.2
Q ss_pred CCccEEEECCCHHHHHHHHHhcc---CCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHH-HHHHcCCcHH
Q 010225 54 DQYDVAVVGGGMVGMALACSLAS---MPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATIS-FFKEIGAWQY 129 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~---~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~l~~lgl~~~ 129 (514)
..+||+|||||++|+++|+.|++ . |++|+|||+...+ ..+.+..+.+.... +++.+|+.+.
T Consensus 4 ~~~dVvIVGgG~aGl~aA~~La~~~~~----G~~V~liE~~~~~-----------~~~~g~~~~~~~~~~~l~~lG~~~~ 68 (538)
T 2aqj_A 4 PIKNIVIVGGGTAGWMAASYLVRALQQ----QANITLIESAAIP-----------RIGVGEATIPSLQKVFFDFLGIPER 68 (538)
T ss_dssp BCCEEEEECCSHHHHHHHHHHHHHCCS----SCEEEEEECSSSC-----------CCCSCEECCTHHHHHTHHHHTCCHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhcCC----CCEEEEECCCCCC-----------CcCCCcccchhHHHHHHHHhCCCHH
Confidence 46899999999999999999999 7 8999999997644 12236778889998 9999998765
Q ss_pred --HHhhhccCc-ceEEEEeC---------------CCcce----eeec-----cC----CCC------------------
Q 010225 130 --VQQHRHAYF-DKMQVWDY---------------TGLGY----TKYN-----AR----DVN------------------ 160 (514)
Q Consensus 130 --~~~~~~~~~-~~~~~~~~---------------~~~~~----~~~~-----~~----~~~------------------ 160 (514)
+..... .+ ..+.+.+. .+... ..+. .. ...
T Consensus 69 ~~~~~~~~-~~~~g~~~~~w~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p 147 (538)
T 2aqj_A 69 EWMPQVNG-AFKAAIKFVNWRKSPDPSRDDHFYHLFGNVPNCDGVPLTHYWLRKREQGFQQPMEYACYPQPGALDGKLAP 147 (538)
T ss_dssp HHGGGGTC-EEECEEEEESCSSSCCTTSCCEEEEESSCCCEETTEEHHHHHHHHHHTTCCSCHHHHHCSCHHHHHTTBCS
T ss_pred HHHHhcCc-hhhCCccccCcCcccccCCCCceECCCCccCccccCchhHHHHHhcccccccCccccccccccHhhhccch
Confidence 333221 11 11121111 11000 0000 00 000
Q ss_pred -------CcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCccccccccCCeeEEEeCCCc
Q 010225 161 -------KEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGT 233 (514)
Q Consensus 161 -------~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~ 233 (514)
....++.+++..|.+.|.+.+++.| ++++++ +|++++.. +++..+.|.+.+|.
T Consensus 148 ~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~g-v~~~~~-~v~~i~~~------------------~~g~~~~v~~~~g~ 207 (538)
T 2aqj_A 148 CLSDGTRQMSHAWHFDAHLVADFLKRWAVERG-VNRVVD-EVVDVRLN------------------NRGYISNLLTKEGR 207 (538)
T ss_dssp BCTTCCBCSCCEEEECHHHHHHHHHHHHHHTT-CEEEEC-CEEEEEEC------------------TTSCEEEEEETTSC
T ss_pred HhhcCCcCCCccEEEeHHHHHHHHHHHHHHCC-CEEEEe-eEeEEEEc------------------CCCcEEEEEECCCc
Confidence 1244788999999999999999877 999999 89999761 01234678888888
Q ss_pred EEEeeE-EEecCCCchhhh-hhCCCccCCC---CCceEEEEEEEecCC----CcceEEEecCCCceEEeecCCCceEEEE
Q 010225 234 SLYAKL-VGADGGKSRVRE-LAGFKTTGWS---YSQNAIICTVEHNKE----NYCAWQRFLPAGPIALLPIGDNFSNIVW 304 (514)
Q Consensus 234 ~~~ad~-V~AdG~~S~vR~-~l~~~~~~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~g~~~~~p~~~~~~~~~~ 304 (514)
++.||+ |+|||.+|.+|+ .++.....+. ....++...++...+ .......+.+.|++|++|.+++ ..+.+
T Consensus 208 ~i~ad~vV~A~G~~s~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~-~~~g~ 286 (538)
T 2aqj_A 208 TLEADLFIDCSGMRGLLINQALKEPFIDMSDYLLCDSAVASAVPNDDARDGVEPYTSSIAMNSGWTWKIPMLGR-FGSGY 286 (538)
T ss_dssp EECCSEEEECCGGGCCCCCCCTCCCEEECTTTCCCCEEEEEEEECCHHHHCCCSSEEEEECSSEEEEEEEETTE-EEEEE
T ss_pred EEEeCEEEECCCCchhhHHHHhCCCccccccccccceEEEEecccCCcccCCCCceeeeecCCceEEEecCCCc-eEEEE
Confidence 899999 999999999965 4565443322 122344434443211 1122234567889999999874 33444
Q ss_pred EcCccchHHhhCCCHHHHHHHHHHhhcCCCCCCCCCCCCCccccccccccCccccccccccCCCceeeeccceeeeeccc
Q 010225 305 TMNPKDASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVVKLASERMVFPLSL 384 (514)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 384 (514)
..... ..++++..+.+.+.+. + ++ . .....+++..
T Consensus 287 v~~~~------~~~~~~~~~~l~~~~~-~--~~-~-----------------------------------~~~~~~~~~~ 321 (538)
T 2aqj_A 287 VFSSH------FTSRDQATADFLKLWG-L--SD-N-----------------------------------QPLNQIKFRV 321 (538)
T ss_dssp EECTT------TSCHHHHHHHHHHHHT-C--CT-T-----------------------------------CCCEEEECCC
T ss_pred EEcCC------CCChHHHHHHHHHHhc-C--CC-C-----------------------------------CCceEEeecc
Confidence 33221 1244566666666553 1 00 0 0011234444
Q ss_pred ccccccccCcEEEEcccccccCCcccccchhhhHHHHHHHHHHHHhhhcCCCcchHHHHHHHHHHhhHHHHHHHHHHHHH
Q 010225 385 KHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKYEAERKPANIVMMAVLDGF 464 (514)
Q Consensus 385 ~~~~~~~~~~v~LvGDAAh~~~P~~GqG~~~al~da~~La~~l~~~~~~~~~~~~~~~l~~Y~~~r~~~~~~~~~~~~~~ 464 (514)
...+++..+||+|||||||.++|+.|||+|+|++||..|+++|.. +.+ ...+|+.|++.|++++..+.......
T Consensus 322 ~~~~~~~~grvvliGDAAh~~~P~~gqG~~~a~~da~~La~~L~~----~~~--~~~~l~~Y~~~~~~~~~~~~~~~~~~ 395 (538)
T 2aqj_A 322 GRNKRAWVNNCVSIGLSSCFLEPLESTGIYFIYAALYQLVKHFPD----TSF--DPRLSDAFNAEIVHMFDDCRDFVQAH 395 (538)
T ss_dssp EEESCSEETTEEECGGGTEECCGGGSCHHHHHHHHHHHHHHTCCB----TTC--CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccCCEEEEcccccccCcchhccHHHHHHHHHHHHHHhhc----cCC--CHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 445667889999999999999999999999999999999988753 222 36799999999999998888877666
Q ss_pred HHhh
Q 010225 465 QKAY 468 (514)
Q Consensus 465 ~~~~ 468 (514)
+..-
T Consensus 396 y~~~ 399 (538)
T 2aqj_A 396 YFTT 399 (538)
T ss_dssp HHTC
T ss_pred hccc
Confidence 6553
No 27
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.97 E-value=2.1e-29 Score=267.45 Aligned_cols=360 Identities=13% Similarity=0.146 Sum_probs=232.6
Q ss_pred CCccEEEECCCHHHHHHHHHhcc---CCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHH-HHHHcCCcHH
Q 010225 54 DQYDVAVVGGGMVGMALACSLAS---MPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATIS-FFKEIGAWQY 129 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~---~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~l~~lgl~~~ 129 (514)
..+||+|||||++|+++|+.|++ . |++|+|||+.+.+ ..+.+..+.+++.. +++.+|+.+.
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~----G~~V~liE~~~~~-----------~~~~g~~~~p~~~~~~l~~lGi~~~ 88 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQG----TADITLLQAPDIP-----------TLGVGEATIPNLQTAFFDFLGIPED 88 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTT----SSEEEEEECCCCC-----------CCCCCEECCTHHHHHTHHHHTCCHH
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCC----CCcEEEEeCCCCC-----------ccceeeeechhHHHHHHHHhCCChH
Confidence 56899999999999999999999 7 8999999997644 12336788899999 9999999876
Q ss_pred --HHhhhccCcceEEE--EeCC-------------Ccce-eeec-----------------------c------------
Q 010225 130 --VQQHRHAYFDKMQV--WDYT-------------GLGY-TKYN-----------------------A------------ 156 (514)
Q Consensus 130 --~~~~~~~~~~~~~~--~~~~-------------~~~~-~~~~-----------------------~------------ 156 (514)
+..........+.+ |... .... ..+. .
T Consensus 89 ~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~ 168 (550)
T 2e4g_A 89 EWMRECNASYKVAIKFINWRTAGEGTSEARELDGGPDHFYHSFGLLKYHEQIPLSHYWFDRSYRGKTVEPFDYACYKEPV 168 (550)
T ss_dssp HHHHHTTCEEECEEEEESSSSCCCCCSSCCEETTEESEEEEESSCCCEETTEEHHHHHHHHHHTTSCCCCHHHHHCSHHH
T ss_pred HHHHhcCCeEEEeeeEeecccccccccccccccCCCCeeEecCCccCCCCcccHHHHHHhhcccccccccccccccchhh
Confidence 44332211122222 2111 0000 0000 0
Q ss_pred -CCC-------C---CcccEEEEehHHHHHHHHHHHhcC-CCceEEcCCeeEEEeeCCCCCCcccCCCCccccccccCCe
Q 010225 157 -RDV-------N---KEILGCVVENKVLHSSLLSCMQNT-EFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHL 224 (514)
Q Consensus 157 -~~~-------~---~~~~~~~i~r~~l~~~L~~~~~~~-g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (514)
.+. . ....++.+++..|.+.|.+.+++. | ++++++ +|++++.. +++..
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~G-v~i~~~-~V~~i~~~------------------~~g~~ 228 (550)
T 2e4g_A 169 ILDANRSPRRLDGSKVTNYAWHFDAHLVADFLRRFATEKLG-VRHVED-RVEHVQRD------------------ANGNI 228 (550)
T ss_dssp HHHTTBCSBCTTSCBCSCCEEEECHHHHHHHHHHHHHHHSC-CEEEEC-CEEEEEEC------------------TTSCE
T ss_pred HHHhhhhhHhhcCCCCCCcceEEcHHHHHHHHHHHHHhcCC-cEEEEC-eEeEEEEc------------------CCCCE
Confidence 000 0 133468899999999999999988 6 999999 99999761 02234
Q ss_pred eEEEeCCCcEEEeeE-EEecCCCchh-hhhhCCCccCCC---CCceEEEEEEEecC----CCcceEEEecCCCceEEeec
Q 010225 225 AKLDLSDGTSLYAKL-VGADGGKSRV-RELAGFKTTGWS---YSQNAIICTVEHNK----ENYCAWQRFLPAGPIALLPI 295 (514)
Q Consensus 225 ~~v~~~~g~~~~ad~-V~AdG~~S~v-R~~l~~~~~~~~---~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~p~ 295 (514)
+.|.+.+|.++.||+ |+|||.+|.+ ++.++.....+. .....+...++... ..........+.|++|++|.
T Consensus 229 ~~v~~~~G~~i~ad~vI~A~G~~S~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ipl 308 (550)
T 2e4g_A 229 ESVRTATGRVFDADLFVDCSGFRGLLINKAMEEPFLDMSDHLLNDSAVATQVPHDDDANGVEPFTSAIAMKSGWTWKIPM 308 (550)
T ss_dssp EEEEETTSCEEECSEEEECCGGGCCCCCCCTCCCEEECTTTCCCCEEEEEEEECCHHHHCCCSSEEEEECSSEEEEEEEC
T ss_pred EEEEECCCCEEECCEEEECCCCchhhHHHHhCCCcccccccccccceEEEeecccCCcccCCCceeeeecCCceEEEccC
Confidence 678888898899999 9999999999 556666543221 12223333333321 11222233457889999999
Q ss_pred CCCceEEEEEcCccchHHhhCCCHHHHHHHHHHhhcCCCCCCCCCCCCCccccccccccCccccccccccCCCceeeecc
Q 010225 296 GDNFSNIVWTMNPKDASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVVKLAS 375 (514)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (514)
++. ..+.+..... ..+.++..+.+.+.+. ..+. + .
T Consensus 309 ~~~-~~~g~v~~~~------~~~~~~~~~~l~~~~~--~~p~----------------------------l--------~ 343 (550)
T 2e4g_A 309 LGR-FGTGYVYSSR------FATEDEAVREFCEMWH--LDPE----------------------------T--------Q 343 (550)
T ss_dssp SSE-EEEEEEECTT------TSCHHHHHHHHHHHTT--CCTT----------------------------T--------S
T ss_pred CCc-cceEEEEecC------CCChHHHHHHHHHhhC--cCcc----------------------------c--------C
Confidence 773 3333333211 1345566666666442 0000 0 0
Q ss_pred ceeeeecccccccccccCcEEEEcccccccCCcccccchhhhHHHHHHHHHHHHhhhcCCCcchHHHHHHHHHHhhHHHH
Q 010225 376 ERMVFPLSLKHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKYEAERKPANI 455 (514)
Q Consensus 376 ~~~~~p~~~~~~~~~~~~~v~LvGDAAh~~~P~~GqG~~~al~da~~La~~l~~~~~~~~~~~~~~~l~~Y~~~r~~~~~ 455 (514)
....+++.....+.+..+|++|||||||.++|+.|||+|+|++||..|+++|.. +.. .+.+|+.|+++|++++.
T Consensus 344 ~~~~i~~~~~~~~~~~~~rvvliGDAAh~~~P~~GqGi~~a~~da~~La~~L~~----~~~--~~~~l~~Y~~~~~~~~~ 417 (550)
T 2e4g_A 344 PLNRIRFRVGRNRRAWVGNCVSIGTSSCFVEPLESTGIYFVYAALYQLVKHFPD----KSL--NPVLTARFNREIETMFD 417 (550)
T ss_dssp CCEEEECCCEEESCSEETTEEECSTTTEECCGGGSCHHHHHHHHHHHHHHTCCC----TTC--CHHHHHHHHHHHHHHHH
T ss_pred CCceEEecCCCccccccCCEEEEehhhcccCccchhhHHHHHHHHHHHHHhccc----cCC--CHHHHHHHHHHHHHHHH
Confidence 001123333334556789999999999999999999999999999999988753 222 37899999999999999
Q ss_pred HHHHHHHHHHHhhcCCC-chHHHHHHHHHHHhccChhHHHHHHHHhhcCC
Q 010225 456 VMMAVLDGFQKAYSVDF-GPLNILRAAAFHGAQYISPLKRNIISYASGEQ 504 (514)
Q Consensus 456 ~~~~~~~~~~~~~~~~~-~~~~~~r~~~l~~~~~~~~~~~~~~~~~~g~~ 504 (514)
.+.......+.+-.... ++....+ .+..-+.+++.+-.+..+..
T Consensus 418 ~i~~~~~~~y~~~~r~~~~fw~~~~-----~~~~p~~l~~~~~~~~~~~~ 462 (550)
T 2e4g_A 418 DTRDFIQAHFYFSPRTDTPFWRANK-----ELRLADGMQEKIDMYRAGMA 462 (550)
T ss_dssp HHHHHHHHHHHTCCCCSSHHHHHHT-----TSCCCHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHhcCCCChHHHHHhh-----cCCCCHHHHHHHHHHHhcCC
Confidence 99998888877654432 3322211 23333466666666655543
No 28
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=99.95 E-value=1.8e-27 Score=245.12 Aligned_cols=369 Identities=12% Similarity=0.073 Sum_probs=212.5
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCC--cHHH
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGA--WQYV 130 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl--~~~~ 130 (514)
.+++||+||||||+|+++|+.|++. |++|+|||+++...... .....+..+...++..++.+|+ |...
T Consensus 20 ~m~~~ViIVGaGpaGl~~A~~La~~----G~~V~viE~~~~~~~~~------g~~~~~~~~~~~~~~~~~~lg~~~~~~~ 89 (430)
T 3ihm_A 20 HMKKRIGIVGAGTAGLHLGLFLRQH----DVDVTVYTDRKPDEYSG------LRLLNTVAHNAVTVQREVALDVNEWPSE 89 (430)
T ss_dssp ---CEEEEECCHHHHHHHHHHHHHT----TCEEEEEESCCGGGSTT------SCCCCCCCBCHHHHHHHHHTTCCCSCHH
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHC----CCeEEEEcCCChHhhcc------cccccchhccchhhhhhhhcChhhhhhh
Confidence 3557999999999999999999996 99999999987432110 0111123445667777778764 3322
Q ss_pred HhhhccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCC-eeEEEeeCCCCCCccc
Q 010225 131 QQHRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPS-RLTSMALLPSSSSISV 209 (514)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~-~v~~v~~~~~~~~~~~ 209 (514)
...+..+.++..... ...+... ....++.+++..+...|.+.+++.| +++++.. .+.+++.
T Consensus 90 ----~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~v~~~~l~~~L~~~~~~~G-v~v~~~~v~~~~l~~--------- 151 (430)
T 3ihm_A 90 ----EFGYFGHYYYVGGPQ-PMRFYGD---LKAPSRAVDYRLYQPMLMRALEARG-GKFCYDAVSAEDLEG--------- 151 (430)
T ss_dssp ----HHCEEEEEEEECSSS-CEEEEEE---EEEEEBEECHHHHHHHHHHHHHHTT-CEEEECCCCGGGHHH---------
T ss_pred ----cccccceeEEECCCC-ccccchh---cCCcceeecHHHHHHHHHHHHHHcC-CEEEEEecchhhhhh---------
Confidence 124555555543321 2233211 1234578999999999999999887 8887732 1222211
Q ss_pred CCCCccccccccCCeeEEEeCCCcEEEeeE-EEecCCCchhhhhhC-CCccCCCCCce-EEEEEEEe-cCC--CcceEEE
Q 010225 210 DSTPSATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKSRVRELAG-FKTTGWSYSQN-AIICTVEH-NKE--NYCAWQR 283 (514)
Q Consensus 210 ~~~~~~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S~vR~~l~-~~~~~~~~~~~-~~~~~~~~-~~~--~~~~~~~ 283 (514)
. ...+|+ |+|||.+|.+|.... ........... .....+.. ..+ ....+..
T Consensus 152 ---------------~--------~~~ad~VV~AdG~~S~~~~~~~~~~~~~~~~p~r~~~~~~~~g~~~~~~~~~~~~~ 208 (430)
T 3ihm_A 152 ---------------L--------SEQYDLLVVCTGKYALGKVFEKQSENSPFEKPQRALCVGLFKGIKEAPIRAVTMSF 208 (430)
T ss_dssp ---------------H--------HTTSSEEEECCCCTTGGGGSCBCGGGCCCSSCSSEEEEEEEESBCCCSSCCEEEEE
T ss_pred ---------------h--------cccCCEEEECCCCcchHHhccCCCCCCcccCCCeeEEEEEEccCCCCCcCeeeeee
Confidence 0 124899 999999999874331 11122222222 22222221 111 2334455
Q ss_pred ecCCCceEEeecC--CCce--EEEEEcCccchHHhhCC----CHHHHHHHHHHhhcCCCCCCCCCCCCCccccccccccC
Q 010225 284 FLPAGPIALLPIG--DNFS--NIVWTMNPKDASDCKSM----NEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGD 355 (514)
Q Consensus 284 ~~~~g~~~~~p~~--~~~~--~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (514)
+...|.++++|.. ++.. .++|..+....+..... +++++++.+.+.+. .|.+. +..++..
T Consensus 209 ~~~~G~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----------~~~~~~~ 276 (430)
T 3ihm_A 209 SPGHGELIEIPTLSFNGMSTALVLENHIGSDLEVLAHTKYDDDPRAFLDLMLEKLG-KHHPS-----------VAERIDP 276 (430)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEEEECTTSSSGGGGTSCTTTCHHHHHHHHHHHHH-HHCHH-----------HHTTBCT
T ss_pred cCCCcceEEecccCCCcceEEEEEEecCCCcHHHhccccCCCCHHHHHHHHHHHHH-HhCcc-----------HHHHHhh
Confidence 5566788888863 2322 33455554333333333 67777777766554 22221 0010100
Q ss_pred ccccccccccCCCceeeeccceeeeecccccccccccCcEEE-EcccccccCCcccccchhhhHHHHHHHHHHHHhhhcC
Q 010225 356 ATLSAKECFEVPPRVVKLASERMVFPLSLKHANNYVSKRVVL-IGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVG 434 (514)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~L-vGDAAh~~~P~~GqG~~~al~da~~La~~l~~~~~~~ 434 (514)
... ...+.+..+.. ...+|+...+..+|..++++| +|||||.++|+.|||+|+||+||..|+++|... +
T Consensus 277 ~~~---~~~d~~~~~~~----~~~~~~~~~~~~~~~~~~~~ll~GDAah~~~p~~g~G~~~a~~da~~l~~~l~~~---~ 346 (430)
T 3ihm_A 277 AEF---DLANSSLDILQ----GGVVPAFRDGHATLNNGKTIIGLGDIQATVDPVLGQGANMASYAAWILGEEILAH---S 346 (430)
T ss_dssp TTC---EESSSTTSEEE----ECCCCEEBCSEEECTTSCEEEECGGGTEECCGGGCCHHHHHHHHHHHHHHHHHHC---S
T ss_pred chh---ccccCccceee----cceeecccccccccCCCCEEEEecCccccCCCchhhhHHHHHHHHHHHHHHHHhc---C
Confidence 000 00000000000 012454455567788899998 999999999999999999999999999999985 2
Q ss_pred CCcchHHHHHHHHHHhh-HHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHhccChhHHHHHHHHhh
Q 010225 435 ADIGEASLLKKYEAERK-PANIVMMAVLDGFQKAYSVDFGPLNILRAAAFHGAQYISPLKRNIISYAS 501 (514)
Q Consensus 435 ~~~~~~~~l~~Y~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~ 501 (514)
++ ..+|..|+.+|+ .+.......++.+..-...... .+ ..++..+...|.+.+.+...++
T Consensus 347 -~~--~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~ 407 (430)
T 3ihm_A 347 -VY--DLRFSEHLERRRQDRVLCATRWTNFTLSALSALPP---EF-LAFLQILSQSREMADEFTDNFN 407 (430)
T ss_dssp -CC--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH---HH-HHHHHHHHHCHHHHHHHHHGGG
T ss_pred -CH--HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcH---HH-HHHHHHHhhCHHHHHHHHHhCC
Confidence 33 679999999998 6666666666555421111111 12 2344445566777776665543
No 29
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.90 E-value=1.1e-22 Score=212.86 Aligned_cols=314 Identities=19% Similarity=0.181 Sum_probs=186.1
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHh
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQ 132 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~ 132 (514)
...+||+||||||+|+++|+.|++. |++|+|||+.+.++ ..+...+.+.+.+.|+.+|+++....
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~----G~~V~liEk~~~~g-----------~~~~~~~~~~~~~~l~~~g~~~~~~~ 154 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALL----GARVVLVEKRIKFS-----------RHNVLHLWPFTIHDLRALGAKKFYGR 154 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHT----TCEEEEEESCSSCC-----------CCCEEECCHHHHHHHHTTTHHHHCTT
T ss_pred cCCCCEEEECccHHHHHHHHHHHHC----CCeEEEEEeccccC-----------CCCcccCChhHHHHHHHcCCcccccc
Confidence 4578999999999999999999996 99999999998652 12456788999999998887543210
Q ss_pred hhccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCC
Q 010225 133 HRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDST 212 (514)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~ 212 (514)
+. . .....+++..+...|.+.+++.+ ++|+++++|++++. +.+
T Consensus 155 -----~~----------------~------~~~~~~~~~~l~~~L~~~~~~~g-v~v~~~~~v~~i~~---------~~~ 197 (497)
T 2bry_A 155 -----FC----------------T------GTLDHISIRQLQLLLLKVALLLG-VEIHWGVKFTGLQP---------PPR 197 (497)
T ss_dssp -----TT----------------C------TTCCEEEHHHHHHHHHHHHHHTT-CEEEESCEEEEEEC---------CCS
T ss_pred -----cc----------------c------cccccCCHHHHHHHHHHHHHhCC-CEEEeCCEEEEEEE---------ecC
Confidence 00 0 00124678999999999999876 99999999999975 100
Q ss_pred CccccccccCCeeEEEe--C-CC--cEEEeeE-EEecCCCchhhhhhCCCccCCCCCceEEEEEEEe---cC----CC-c
Q 010225 213 PSATTLFTKGHLAKLDL--S-DG--TSLYAKL-VGADGGKSRVRELAGFKTTGWSYSQNAIICTVEH---NK----EN-Y 278 (514)
Q Consensus 213 ~~~~~~~~~~~~~~v~~--~-~g--~~~~ad~-V~AdG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~---~~----~~-~ 278 (514)
+++.+.|.+ . +| .++.||+ |+|||.+|.+|+..+....+... .......+.. .. +. .
T Consensus 198 --------~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~r~~~~~~~~g~~~-~~~~~~l~~~~~~~~~~~~~~~G 268 (497)
T 2bry_A 198 --------KGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFVPEGFTIREMRGKLA-IGITANFVNGRTVEETQVPEISG 268 (497)
T ss_dssp --------TTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCCCTTCEEEEEECSCC-EEEEEEEECCCCHHHHTSCCBCC
T ss_pred --------CCCEEEEEEEECCCCCEEEEEcCEEEECCCCCcccccccchhhcCcee-EeeeeeeeeeccccccchhhcCc
Confidence 124466666 4 56 4699999 99999999999877665554431 1111112221 00 00 1
Q ss_pred ceEE---EecC-----CC-ce-EEeecCCCceEEEEEcCc-------------cchHHhh---CCCHHHHHHHHH--Hhh
Q 010225 279 CAWQ---RFLP-----AG-PI-ALLPIGDNFSNIVWTMNP-------------KDASDCK---SMNEDDFVKILN--HAL 330 (514)
Q Consensus 279 ~~~~---~~~~-----~g-~~-~~~p~~~~~~~~~~~~~~-------------~~~~~~~---~~~~~~~~~~~~--~~~ 330 (514)
..+. .+++ .| .. .++|.+++...++..... ....... ..+.+.+..... ..|
T Consensus 269 ~~~~~~~~~f~~~~~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 348 (497)
T 2bry_A 269 VARIYNQKFFQSLLKATGIDLENIVYYKDETHYFVMTAKKQCLLRLGVLRQDLSETDQLLGKANVVPEALQRFARAAADF 348 (497)
T ss_dssp ----CCSSHHHHHHHHHCCCEEEEEEEESSEEEEEEEECHHHHHHTTSBSSCCSSHHHHTSTTTBCHHHHHHHHHHHHHH
T ss_pred eEEecChhhhHhHHhhcCCCcccccccCCCeEEEEeccccccccccceeeccccchHhhhhhccCCHHHHHHhhcccccc
Confidence 1110 0110 11 11 134444443322221110 0011111 113233321111 111
Q ss_pred cCCCCCCCCCCCCCcccccc---ccccCccccccccccCCCceeeeccceeeeecccccccccccCc-EEEEccccc-cc
Q 010225 331 DYGYGPHPKSISSGSVDMFS---WFRGDATLSAKECFEVPPRVVKLASERMVFPLSLKHANNYVSKR-VVLIGDAAH-TV 405 (514)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-v~LvGDAAh-~~ 405 (514)
..... .+.+. ..+|. |..-.........|++..+.+.+|..|| ++|+||||| .+
T Consensus 349 ~~~~~----------~~~~~~~~~~~g~-----------~~~~~~~~~~~~~~~~~~r~a~~~~~gRr~~l~Gda~~~~~ 407 (497)
T 2bry_A 349 ATHGK----------LGKLEFAQDARGR-----------PDVAAFDFTSMMRAESSARVQEKHGARLLLGLVGDCLVEPF 407 (497)
T ss_dssp HTTTT----------TCSCCBCBCTTSS-----------BCEEEEECSEEEEESCSEEEEEETTEEEEEEECGGGTBCCC
T ss_pred chhhc----------cccchhhhhccCC-----------CCCceeeeEEEEecchhhHHHHhcCCcccceEeccccccCc
Confidence 10000 00011 11111 0000101233556899999999999998 999999999 45
Q ss_pred CCcccccchhhhHHHHHHHHHHHHhhhcCCCcchHHHHHHHHHHhhHHHHH
Q 010225 406 HPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKYEAERKPANIV 456 (514)
Q Consensus 406 ~P~~GqG~~~al~da~~La~~l~~~~~~~~~~~~~~~l~~Y~~~r~~~~~~ 456 (514)
.| .|||+|++|+||..|++.|...++ +. ....+| .+|++.++.
T Consensus 408 ~p-~g~G~n~g~~~a~~l~~~l~~~~~-g~--~~~~~l----~~r~~~~~~ 450 (497)
T 2bry_A 408 WP-LGTGVARGFLAAFDAAWMVKRWAE-GA--GPLEVL----AERESLYQL 450 (497)
T ss_dssp GG-GCCHHHHHHHHHHHHHHHHHHHHT-TC--CHHHHH----HHHHHHHTT
T ss_pred Cc-cccchhhHHHHHHHHHHHHHHHhC-CC--Cccchh----hhHHHHhhh
Confidence 55 999999999999999999999864 32 234555 666665543
No 30
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.86 E-value=5e-20 Score=183.09 Aligned_cols=304 Identities=14% Similarity=0.117 Sum_probs=170.4
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCC--CCCCceEEeC---hhhHHHHHHcCCcHH
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKED--PPDPRVSTVT---PATISFFKEIGAWQY 129 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~--~~~~~~~~l~---~~~~~~l~~lgl~~~ 129 (514)
++||+|||||++|+++|+.|++. |++|+||||.+.++......... ........+. +...+.++.+
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~----G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 72 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAA----GHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQW----- 72 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHH-----
T ss_pred CceEEEECCcHHHHHHHHHHHHC----CCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHH-----
Confidence 47999999999999999999996 99999999998663221100000 0000001111 2222333221
Q ss_pred HHhhhc-cCc-ceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCc
Q 010225 130 VQQHRH-AYF-DKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSI 207 (514)
Q Consensus 130 ~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~ 207 (514)
..... ... ..+....... +... ......+ ..+..+.. |.+.+.+ + ++|+++++|++++.
T Consensus 73 -~~~~~~~~~~~~~~~~~~~~-----~~~~--~~~~~~~-~~~~~~~~-l~~~l~~-g-~~i~~~~~v~~i~~------- 133 (336)
T 1yvv_A 73 -QAQGHVAEWTPLLYNFHAGR-----LSPS--PDEQVRW-VGKPGMSA-ITRAMRG-D-MPVSFSCRITEVFR------- 133 (336)
T ss_dssp -HHHTSEEEECCCEEEESSSB-----CCCC--CTTSCEE-EESSCTHH-HHHHHHT-T-CCEECSCCEEEEEE-------
T ss_pred -HhCCCeeeccccceeccCcc-----cccC--CCCCccE-EcCccHHH-HHHHHHc-c-CcEEecCEEEEEEE-------
Confidence 11110 011 1111111110 0000 0111112 22222222 3333333 4 89999999999987
Q ss_pred ccCCCCccccccccCCeeEEEeCCCcEEE-eeE-EEecCCCchhhhhhCCC-----ccCCCCCceEEEEEEEecCCC-cc
Q 010225 208 SVDSTPSATTLFTKGHLAKLDLSDGTSLY-AKL-VGADGGKSRVRELAGFK-----TTGWSYSQNAIICTVEHNKEN-YC 279 (514)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~v~~~~g~~~~-ad~-V~AdG~~S~vR~~l~~~-----~~~~~~~~~~~~~~~~~~~~~-~~ 279 (514)
.++.+.|++.+|.... ||+ |+|+|.+|.+|.....+ .....|. ..+...+..+.+. ..
T Consensus 134 -------------~~~~~~v~~~~g~~~~~a~~vV~a~g~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~ 199 (336)
T 1yvv_A 134 -------------GEEHWNLLDAEGQNHGPFSHVIIATPAPQASTLLAAAPKLASVVAGVKMD-PTWAVALAFETPLQTP 199 (336)
T ss_dssp -------------CSSCEEEEETTSCEEEEESEEEECSCHHHHGGGGTTCHHHHHHHTTCCEE-EEEEEEEEESSCCSCC
T ss_pred -------------eCCEEEEEeCCCcCccccCEEEEcCCHHHHHHhhccCHHHHHHHhhcCcc-ceeEEEEEecCCCCCC
Confidence 4467889999998664 999 99999999998653221 1233443 3344444444433 22
Q ss_pred eEEEecCCCceEEe------ecCCCc-eEEEEEcCccchHHhhCCCHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccc
Q 010225 280 AWQRFLPAGPIALL------PIGDNF-SNIVWTMNPKDASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWF 352 (514)
Q Consensus 280 ~~~~~~~~g~~~~~------p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (514)
....+.++++..++ |...+. ..++|.............+++++.+.+.+.+..-++...
T Consensus 200 ~~~~~~~~~~~~~l~~~~~~p~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~~~-------------- 265 (336)
T 1yvv_A 200 MQGCFVQDSPLDWLARNRSKPERDDTLDTWILHATSQWSRQNLDASREQVIEHLHGAFAELIDCTM-------------- 265 (336)
T ss_dssp CCEEEECSSSEEEEEEGGGSTTCCCSSEEEEEEECHHHHHHTTTSCHHHHHHHHHHHHHTTCSSCC--------------
T ss_pred CCeEEeCCCceeEEEecCcCCCCCCCCcEEEEEeCHHHHHHHHhCCHHHHHHHHHHHHHHHhCCCC--------------
Confidence 23334556665555 443443 568888776655556677889999988886652222110
Q ss_pred ccCccccccccccCCCceeeeccceeeeeccccccccc--ccCcEEEEcccccccCCcccccchhhhHHHHHHHHHHHHh
Q 010225 353 RGDATLSAKECFEVPPRVVKLASERMVFPLSLKHANNY--VSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEG 430 (514)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~--~~~~v~LvGDAAh~~~P~~GqG~~~al~da~~La~~l~~~ 430 (514)
..+.......+...+|.+....... ..+|++|+|||+|. .|++.|+.++..||+.|.+.
T Consensus 266 -------------~~p~~~~~~rw~~a~~~~~~~~~~~~~~~~rl~laGDa~~g------~gv~~a~~sg~~lA~~l~~~ 326 (336)
T 1yvv_A 266 -------------PAPVFSLAHRWLYARPAGAHEWGALSDADLGIYVCGDWCLS------GRVEGAWLSGQEAARRLLEH 326 (336)
T ss_dssp -------------CCCSEEEEEEEEEEEESSCCCCSCEEETTTTEEECCGGGTT------SSHHHHHHHHHHHHHHHHHH
T ss_pred -------------CCCcEEEccccCccCCCCCCCCCeeecCCCCEEEEecCCCC------CCHHHHHHHHHHHHHHHHHH
Confidence 0011122222333344443322222 24899999999963 49999999999999999998
Q ss_pred hhc
Q 010225 431 IAV 433 (514)
Q Consensus 431 ~~~ 433 (514)
+..
T Consensus 327 ~~~ 329 (336)
T 1yvv_A 327 LQL 329 (336)
T ss_dssp TTC
T ss_pred hhh
Confidence 653
No 31
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.64 E-value=2.4e-15 Score=151.99 Aligned_cols=191 Identities=14% Similarity=0.077 Sum_probs=110.7
Q ss_pred EEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCccccccccCCeeEEEeCCCcEEEeeE-EEecCC
Q 010225 167 VVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKL-VGADGG 245 (514)
Q Consensus 167 ~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~ 245 (514)
.++...+.+.|.+.+++.| ++++++++|++++. .++.+.|.+.+| ++.||. |.|+|.
T Consensus 160 ~~~~~~~~~~l~~~~~~~g-~~i~~~~~v~~i~~--------------------~~~~~~v~~~~g-~~~a~~vV~A~G~ 217 (382)
T 1ryi_A 160 HVEPYFVCKAYVKAAKMLG-AEIFEHTPVLHVER--------------------DGEALFIKTPSG-DVWANHVVVASGV 217 (382)
T ss_dssp BCCHHHHHHHHHHHHHHTT-CEEETTCCCCEEEC--------------------SSSSEEEEETTE-EEEEEEEEECCGG
T ss_pred EEcHHHHHHHHHHHHHHCC-CEEEcCCcEEEEEE--------------------ECCEEEEEcCCc-eEEcCEEEECCCh
Confidence 4677899999999999887 99999999999976 334567777777 799999 999999
Q ss_pred Cch-hhhhhCCCccCCCCCceEEEEEEEecCCC-cceEEEecCCCceEEeecCCCceEEEEEcCccchHHhhCCCHH---
Q 010225 246 KSR-VRELAGFKTTGWSYSQNAIICTVEHNKEN-YCAWQRFLPAGPIALLPIGDNFSNIVWTMNPKDASDCKSMNED--- 320 (514)
Q Consensus 246 ~S~-vR~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--- 320 (514)
+|. +.+.++....... .......++..... ... .+ ....|++|..++...+........ .....+.+
T Consensus 218 ~s~~l~~~~~~~~~~~~--~~g~~~~~~~~~~~~~~~--~~--~~~~~~~p~~~g~~~vG~~~~~~~--~~~~~~~~~~~ 289 (382)
T 1ryi_A 218 WSGMFFKQLGLNNAFLP--VKGECLSVWNDDIPLTKT--LY--HDHCYIVPRKSGRLVVGATMKPGD--WSETPDLGGLE 289 (382)
T ss_dssp GTHHHHHHTTCCCCCEE--EEEEEEEEECCSSCCCSE--EE--ETTEEEEECTTSEEEEECCCEETC--CCCSCCHHHHH
T ss_pred hHHHHHHhcCCCCceec--cceEEEEECCCCCCccce--EE--cCCEEEEEcCCCeEEEeecccccC--CCCCCCHHHHH
Confidence 987 7777664332111 11222222222111 111 12 236788898776544443221111 11112222
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCccccccccccCccccccccccCCCceeeeccceeeeecccccccccccCcEEEEcc
Q 010225 321 DFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVVKLASERMVFPLSLKHANNYVSKRVVLIGD 400 (514)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~LvGD 400 (514)
.+.+.+.+.++ .+.. . .+.. .+...+| +..++..++|+
T Consensus 290 ~l~~~~~~~~p-------------------~l~~-----------~--~~~~--~w~g~~~--------~t~d~~p~ig~ 327 (382)
T 1ryi_A 290 SVMKKAKTMLP-------------------AIQN-----------M--KVDR--FWAGLRP--------GTKDGKPYIGR 327 (382)
T ss_dssp HHHHHHHHHCG-------------------GGGG-----------S--EEEE--EEEEEEE--------ECSSSCCEEEE
T ss_pred HHHHHHHHhCC-------------------CcCC-----------C--ceee--EEEEecc--------cCCCCCcEecc
Confidence 33333333332 0000 0 0000 1111122 23355667787
Q ss_pred cc-----cccCCcccccchhhhHHHHHHHHHHHH
Q 010225 401 AA-----HTVHPLAGQGVNLGFGDASTLSRIIAE 429 (514)
Q Consensus 401 AA-----h~~~P~~GqG~~~al~da~~La~~l~~ 429 (514)
+. ....++.|.|+.+|...|..|++.|..
T Consensus 328 ~~~~~~l~~~~G~~g~G~~~a~~~g~~la~~i~~ 361 (382)
T 1ryi_A 328 HPEDSRILFAAGHFRNGILLAPATGALISDLIMN 361 (382)
T ss_dssp ETTEEEEEEEECCSSCTTTTHHHHHHHHHHHHTT
T ss_pred CCCcCCEEEEEcCCcchHHHhHHHHHHHHHHHhC
Confidence 53 446778899999999999988888865
No 32
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.61 E-value=2.8e-14 Score=145.23 Aligned_cols=116 Identities=11% Similarity=0.045 Sum_probs=76.4
Q ss_pred EEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCccccccccCCeeEEEeCCCcEEEeeE-EEecCC
Q 010225 167 VVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKL-VGADGG 245 (514)
Q Consensus 167 ~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~ 245 (514)
.++...+.+.|.+.+++.| ++++++++|++++. +.+..+.|.+.+| ++.||. |.|+|.
T Consensus 170 ~~~~~~~~~~l~~~~~~~g-~~i~~~~~v~~i~~-------------------~~~~~~~v~~~~g-~~~a~~vV~a~G~ 228 (405)
T 2gag_B 170 IAKHDHVAWAFARKANEMG-VDIIQNCEVTGFIK-------------------DGEKVTGVKTTRG-TIHAGKVALAGAG 228 (405)
T ss_dssp BCCHHHHHHHHHHHHHHTT-CEEECSCCEEEEEE-------------------SSSBEEEEEETTC-CEEEEEEEECCGG
T ss_pred cCCHHHHHHHHHHHHHHCC-CEEEcCCeEEEEEE-------------------eCCEEEEEEeCCc-eEECCEEEECCch
Confidence 3566789999999999887 99999999999986 1223466777777 699999 999999
Q ss_pred Cc-hhhhhhCCCccCCCCCceEEEEEEEecCCCcceEEEecCCCceEEeecCCCceEEEEEc
Q 010225 246 KS-RVRELAGFKTTGWSYSQNAIICTVEHNKENYCAWQRFLPAGPIALLPIGDNFSNIVWTM 306 (514)
Q Consensus 246 ~S-~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~ 306 (514)
+| .+++.++...+...+....+... +......... +..+..+++.|..++...+....
T Consensus 229 ~s~~l~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~y~~p~~~g~~~ig~~~ 287 (405)
T 2gag_B 229 HSSVLAEMAGFELPIQSHPLQALVSE-LFEPVHPTVV--MSNHIHVYVSQAHKGELVMGAGI 287 (405)
T ss_dssp GHHHHHHHHTCCCCEEEEEEEEEEEE-EBCSCCCSEE--EETTTTEEEEECTTSEEEEEEEE
T ss_pred hHHHHHHHcCCCCCccccceeEEEec-CCccccCceE--EeCCCcEEEEEcCCCcEEEEecc
Confidence 98 68887776543322211111111 1111111121 23456788888877766665544
No 33
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.58 E-value=2.2e-13 Score=137.49 Aligned_cols=68 Identities=12% Similarity=0.162 Sum_probs=56.3
Q ss_pred EEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCccccccccCCeeE-EEeCCCcEEEeeE-EEecC
Q 010225 167 VVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAK-LDLSDGTSLYAKL-VGADG 244 (514)
Q Consensus 167 ~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~g~~~~ad~-V~AdG 244 (514)
.++...+.+.|.+.+++.| ++|+++++|++++. +++.+. |.+.+| ++.||. |.|+|
T Consensus 145 ~~~~~~l~~~l~~~~~~~G-v~i~~~~~v~~i~~--------------------~~~~v~gv~~~~g-~i~a~~VV~A~G 202 (382)
T 1y56_B 145 KADPFEATTAFAVKAKEYG-AKLLEYTEVKGFLI--------------------ENNEIKGVKTNKG-IIKTGIVVNATN 202 (382)
T ss_dssp EECHHHHHHHHHHHHHHTT-CEEECSCCEEEEEE--------------------SSSBEEEEEETTE-EEECSEEEECCG
T ss_pred eECHHHHHHHHHHHHHHCC-CEEECCceEEEEEE--------------------ECCEEEEEEECCc-EEECCEEEECcc
Confidence 4678999999999999987 99999999999987 334555 777777 799999 99999
Q ss_pred CCc-hhhhhhCCC
Q 010225 245 GKS-RVRELAGFK 256 (514)
Q Consensus 245 ~~S-~vR~~l~~~ 256 (514)
.+| .+.+.++..
T Consensus 203 ~~s~~l~~~~g~~ 215 (382)
T 1y56_B 203 AWANLINAMAGIK 215 (382)
T ss_dssp GGHHHHHHHHTCC
T ss_pred hhHHHHHHHcCCC
Confidence 998 566666654
No 34
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.56 E-value=1.6e-13 Score=139.34 Aligned_cols=170 Identities=17% Similarity=0.169 Sum_probs=101.5
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeC-----hhh-HHHHHHcCCc
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVT-----PAT-ISFFKEIGAW 127 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~-----~~~-~~~l~~lgl~ 127 (514)
..+||+|||||++|+++|+.|++. |++|+||||.......+. .......+. +.. ...++.+.+|
T Consensus 3 ~~~DVvIIGaG~~Gl~~A~~La~~----G~~V~vlE~~~~~~~~ga------s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (397)
T 2oln_A 3 ESYDVVVVGGGPVGLATAWQVAER----GHRVLVLERHTFFNENGG------TSGAERHWRLQYTQEDLFRLTLETLPLW 72 (397)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT----TCCEEEEESSCTTCSSSS------CCSSEEEECSCCSSHHHHHHHHHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC----CCeEEEEeCCCCCCCCCC------CCCcCeEEEeccCcchhhhHHHHHHHHH
Confidence 358999999999999999999996 999999999886532121 000011110 111 1112223344
Q ss_pred HHHHhhhccC----cceEEEEeCCC------------------cceeeeccC-------CC--CCc------ccEEEEeh
Q 010225 128 QYVQQHRHAY----FDKMQVWDYTG------------------LGYTKYNAR-------DV--NKE------ILGCVVEN 170 (514)
Q Consensus 128 ~~~~~~~~~~----~~~~~~~~~~~------------------~~~~~~~~~-------~~--~~~------~~~~~i~r 170 (514)
+++.+..... ...+.+..... .....+... .. ... +.+..++.
T Consensus 73 ~~l~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~ 152 (397)
T 2oln_A 73 RALESRCERRLIHEIGSLWFGDTDVVTNEGQISGTAAMMDKLSVRYEWLKATDIERRFGFRGLPRDYEGFLQPDGGTIDV 152 (397)
T ss_dssp HHHHHHHTCCCEECCCEEEEECSSCCBTTBCHHHHHHHHHHTTCCCEEEEHHHHHHHHCCCSCCTTCEEEEETTCEEEEH
T ss_pred HHHHHHhCccHHHHCCcEEEcCCCccchhHHHHHHHHHHHHcCCCceecCHHHHHhhCcCccCCCceeEEEcCCCCEEcH
Confidence 4443321101 11122221111 000000000 00 000 11235678
Q ss_pred HHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCccccccccCCeeEEEeCCCcEEEeeE-EEecCCC-ch
Q 010225 171 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGK-SR 248 (514)
Q Consensus 171 ~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~-S~ 248 (514)
..+...|.+.+++.| ++|+++++|++++. +++.+.|.+.+| ++.||. |.|+|.+ +.
T Consensus 153 ~~~~~~l~~~a~~~G-v~i~~~~~V~~i~~--------------------~~~~v~v~t~~g-~i~a~~VV~A~G~~s~~ 210 (397)
T 2oln_A 153 RGTLAALFTLAQAAG-ATLRAGETVTELVP--------------------DADGVSVTTDRG-TYRAGKVVLACGPYTND 210 (397)
T ss_dssp HHHHHHHHHHHHHTT-CEEEESCCEEEEEE--------------------ETTEEEEEESSC-EEEEEEEEECCGGGHHH
T ss_pred HHHHHHHHHHHHHcC-CEEECCCEEEEEEE--------------------cCCeEEEEECCC-EEEcCEEEEcCCcChHH
Confidence 889999999999887 99999999999986 345677777666 699999 9999999 45
Q ss_pred hhhhhCC
Q 010225 249 VRELAGF 255 (514)
Q Consensus 249 vR~~l~~ 255 (514)
+++.++.
T Consensus 211 l~~~~g~ 217 (397)
T 2oln_A 211 LLEPLGA 217 (397)
T ss_dssp HHGGGTC
T ss_pred HhhhcCC
Confidence 7777764
No 35
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.55 E-value=1.2e-13 Score=139.77 Aligned_cols=169 Identities=14% Similarity=0.179 Sum_probs=99.4
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeC------hhhHHH-HHHcCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVT------PATISF-FKEIGA 126 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~------~~~~~~-l~~lgl 126 (514)
+++||+|||||++|+++|+.|++. |++|+|||++...+..+.. ...+..+. +...++ .+.+.+
T Consensus 2 ~~~dvvIIGaG~~Gl~~A~~La~~----G~~V~vie~~~~~~~~g~s------~~~~~~~~~~~~~~~~~~~l~~~~~~~ 71 (389)
T 2gf3_A 2 THFDVIVVGAGSMGMAAGYQLAKQ----GVKTLLVDAFDPPHTNGSH------HGDTRIIRHAYGEGREYVPLALRSQEL 71 (389)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT----TCCEEEECSSCSSCSSSSS------CSSEEEECSSCTTCGGGHHHHHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC----CCeEEEEeCCCCCCCCCCC------CCcchhhhhhhcCCchHHHHHHHHHHH
Confidence 368999999999999999999996 9999999998866411110 00111111 111111 122233
Q ss_pred cHHHHhhhc----cCcceEEEEeC-C--------------CcceeeeccC-------CC--CCc------ccEEEEehHH
Q 010225 127 WQYVQQHRH----AYFDKMQVWDY-T--------------GLGYTKYNAR-------DV--NKE------ILGCVVENKV 172 (514)
Q Consensus 127 ~~~~~~~~~----~~~~~~~~~~~-~--------------~~~~~~~~~~-------~~--~~~------~~~~~i~r~~ 172 (514)
++.+.+... .....+.+... . +.....+... .. ... +....++...
T Consensus 72 ~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 151 (389)
T 2gf3_A 72 WYELEKETHHKIFTKTGVLVFGPKGESAFVAETMEAAKEHSLTVDLLEGDEINKRWPGITVPENYNAIFEPNSGVLFSEN 151 (389)
T ss_dssp HHHHHHHCSSCCEECCCEEEEEETTCCHHHHHHHHHHHHTTCCCEEEETHHHHHHSTTCCCCTTEEEEEETTCEEEEHHH
T ss_pred HHHHHHHhCCcceeecceEEEcCCCchHHHHHHHHHHHHcCCCcEEcCHHHHHHhCCCcccCCCceEEEeCCCcEEeHHH
Confidence 344332111 01111222111 0 0000000000 00 000 1124567789
Q ss_pred HHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCccccccccCCeeEEEeCCCcEEEeeE-EEecCCCch-hh
Q 010225 173 LHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKSR-VR 250 (514)
Q Consensus 173 l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S~-vR 250 (514)
+...|.+.+++.| ++++++++|++++. .++.+.|.+.+| ++.||. |.|+|.+|. +.
T Consensus 152 ~~~~l~~~~~~~G-v~i~~~~~v~~i~~--------------------~~~~~~v~~~~g-~~~a~~vV~A~G~~~~~l~ 209 (389)
T 2gf3_A 152 CIRAYRELAEARG-AKVLTHTRVEDFDI--------------------SPDSVKIETANG-SYTADKLIVSMGAWNSKLL 209 (389)
T ss_dssp HHHHHHHHHHHTT-CEEECSCCEEEEEE--------------------CSSCEEEEETTE-EEEEEEEEECCGGGHHHHG
T ss_pred HHHHHHHHHHHCC-CEEEcCcEEEEEEe--------------------cCCeEEEEeCCC-EEEeCEEEEecCccHHHHh
Confidence 9999999999987 99999999999987 334577777666 699999 999999875 44
Q ss_pred hhhC
Q 010225 251 ELAG 254 (514)
Q Consensus 251 ~~l~ 254 (514)
+.++
T Consensus 210 ~~~g 213 (389)
T 2gf3_A 210 SKLN 213 (389)
T ss_dssp GGGT
T ss_pred hhhc
Confidence 4444
No 36
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.54 E-value=8.2e-13 Score=126.09 Aligned_cols=38 Identities=24% Similarity=0.441 Sum_probs=34.6
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALG 95 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~ 95 (514)
|++||+||||||+||++|+.|+++ |++|+||||++.++
T Consensus 1 Mt~dV~IIGaGpaGL~aA~~La~~----G~~V~v~Ek~~~~G 38 (336)
T 3kkj_A 1 MTVPIAIIGTGIAGLSAAQALTAA----GHQVHLFDKSRGSG 38 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSSSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC----CCCEEEEECCCCCC
Confidence 458999999999999999999997 99999999998774
No 37
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.54 E-value=8.7e-14 Score=140.25 Aligned_cols=69 Identities=17% Similarity=0.262 Sum_probs=58.5
Q ss_pred EEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCccccccccCCeeEEEeCCCcEEEeeE-EEecC
Q 010225 166 CVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKL-VGADG 244 (514)
Q Consensus 166 ~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG 244 (514)
..++...+...|.+.+++.| ++|+++++|++++. +++.+.|++.+| ++.||. |.|+|
T Consensus 149 ~~~~~~~~~~~l~~~a~~~G-v~i~~~~~V~~i~~--------------------~~~~~~V~t~~g-~i~a~~VV~A~G 206 (381)
T 3nyc_A 149 ADIDTDALHQGYLRGIRRNQ-GQVLCNHEALEIRR--------------------VDGAWEVRCDAG-SYRAAVLVNAAG 206 (381)
T ss_dssp EEECHHHHHHHHHHHHHHTT-CEEESSCCCCEEEE--------------------ETTEEEEECSSE-EEEESEEEECCG
T ss_pred ceECHHHHHHHHHHHHHHCC-CEEEcCCEEEEEEE--------------------eCCeEEEEeCCC-EEEcCEEEECCC
Confidence 45788999999999999988 99999999999987 345688888877 799999 99999
Q ss_pred CCc-hhhhhhCCC
Q 010225 245 GKS-RVRELAGFK 256 (514)
Q Consensus 245 ~~S-~vR~~l~~~ 256 (514)
.+| .+.+.++..
T Consensus 207 ~~s~~l~~~~g~~ 219 (381)
T 3nyc_A 207 AWCDAIAGLAGVR 219 (381)
T ss_dssp GGHHHHHHHHTCC
T ss_pred hhHHHHHHHhCCC
Confidence 998 466666654
No 38
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.52 E-value=1.5e-12 Score=141.26 Aligned_cols=63 Identities=17% Similarity=0.172 Sum_probs=55.4
Q ss_pred EEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCccccccccCCeeEEEeCCCcEEEeeE-EEec
Q 010225 165 GCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKL-VGAD 243 (514)
Q Consensus 165 ~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~ad~-V~Ad 243 (514)
+..++...+...|.+.+++.| ++|+++++|++++. +++.+.|.+.+|.++.||. |.|+
T Consensus 411 ~g~v~p~~l~~aL~~~a~~~G-v~i~~~t~V~~l~~--------------------~~~~v~V~t~~G~~i~Ad~VVlAt 469 (676)
T 3ps9_A 411 GGWLCPAELTRNVLELAQQQG-LQIYYQYQLQNFSR--------------------KDDCWLLNFAGDQQATHSVVVLAN 469 (676)
T ss_dssp CEEECHHHHHHHHHHHHHHTT-CEEEESCCEEEEEE--------------------ETTEEEEEETTSCEEEESEEEECC
T ss_pred CeeeCHHHHHHHHHHHHHhCC-CEEEeCCeeeEEEE--------------------eCCeEEEEECCCCEEECCEEEECC
Confidence 345788999999999999988 99999999999987 4456888888888899999 9999
Q ss_pred CCCch
Q 010225 244 GGKSR 248 (514)
Q Consensus 244 G~~S~ 248 (514)
|.+|.
T Consensus 470 G~~s~ 474 (676)
T 3ps9_A 470 GHQIS 474 (676)
T ss_dssp GGGGG
T ss_pred Ccchh
Confidence 99986
No 39
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.50 E-value=2e-12 Score=135.37 Aligned_cols=116 Identities=17% Similarity=0.080 Sum_probs=72.7
Q ss_pred EEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCccccccccCCeeEEEe---CCCc--EEEeeE-
Q 010225 166 CVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDL---SDGT--SLYAKL- 239 (514)
Q Consensus 166 ~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~---~~g~--~~~ad~- 239 (514)
..++...+...|.+.+.+.| ++|+++++|++++. +++.+.|.+ .+|+ ++.||.
T Consensus 144 g~v~~~~l~~~l~~~a~~~G-v~i~~~~~V~~l~~--------------------~~~~~~V~~~d~~~G~~~~i~A~~V 202 (501)
T 2qcu_A 144 CWVDDARLVLANAQMVVRKG-GEVLTRTRATSARR--------------------ENGLWIVEAEDIDTGKKYSWQARGL 202 (501)
T ss_dssp EEECHHHHHHHHHHHHHHTT-CEEECSEEEEEEEE--------------------ETTEEEEEEEETTTCCEEEEEESCE
T ss_pred CEEcHHHHHHHHHHHHHHcC-CEEEcCcEEEEEEE--------------------eCCEEEEEEEECCCCCEEEEECCEE
Confidence 34789999999999999988 99999999999987 335566666 3565 799999
Q ss_pred EEecCCCch-hhhh-hCCCccCCCCCceEEEEEEEecCCCcceEEEecC-CCceEEeecCCCceEE
Q 010225 240 VGADGGKSR-VREL-AGFKTTGWSYSQNAIICTVEHNKENYCAWQRFLP-AGPIALLPIGDNFSNI 302 (514)
Q Consensus 240 V~AdG~~S~-vR~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~p~~~~~~~~ 302 (514)
|+|+|.+|. +++. ++......-.........++...+....+....+ +..++++|..++...+
T Consensus 203 V~AtG~~s~~l~~~~l~~~~~~~i~p~rG~~~~~~~~~~~~~~~~~~~~dg~~~~~~P~~~g~~~i 268 (501)
T 2qcu_A 203 VNATGPWVKQFFDDGMHLPSPYGIRLIKGSHIVVPRVHTQKQAYILQNEDKRIVFVIPWMDEFSII 268 (501)
T ss_dssp EECCGGGHHHHHHHHTCCCCSSCBCCEEEEEEEEECSSSCSCEEEEECTTSCEEEEEEETTTEEEE
T ss_pred EECCChhHHHHHHHhccCCcccccccceeEEEEECCCCCCceEEEeecCCCCEEEEEEcCCCcEEE
Confidence 999999986 4554 5432111112222222233322222222111123 3467888987665433
No 40
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.49 E-value=2e-12 Score=140.59 Aligned_cols=62 Identities=13% Similarity=0.065 Sum_probs=53.3
Q ss_pred EEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCccccccccCCeeEEEeCCCc-EEEeeE-EEec
Q 010225 166 CVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGT-SLYAKL-VGAD 243 (514)
Q Consensus 166 ~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~-~~~ad~-V~Ad 243 (514)
..++...+...|.+.+++.| ++|+++++|++++. +++.+.|.+.+|. ++.||. |.|+
T Consensus 407 g~v~p~~l~~aL~~~a~~~G-v~i~~~t~V~~l~~--------------------~~~~v~V~t~~G~~~i~Ad~VVlAt 465 (689)
T 3pvc_A 407 GWLCPSDLTHALMMLAQQNG-MTCHYQHELQRLKR--------------------IDSQWQLTFGQSQAAKHHATVILAT 465 (689)
T ss_dssp EEECHHHHHHHHHHHHHHTT-CEEEESCCEEEEEE--------------------CSSSEEEEEC-CCCCEEESEEEECC
T ss_pred eEECHHHHHHHHHHHHHhCC-CEEEeCCeEeEEEE--------------------eCCeEEEEeCCCcEEEECCEEEECC
Confidence 45678999999999999988 99999999999987 3455888888887 799999 9999
Q ss_pred CCCch
Q 010225 244 GGKSR 248 (514)
Q Consensus 244 G~~S~ 248 (514)
|.+|.
T Consensus 466 G~~s~ 470 (689)
T 3pvc_A 466 GHRLP 470 (689)
T ss_dssp GGGTT
T ss_pred Ccchh
Confidence 99986
No 41
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.48 E-value=1.3e-12 Score=134.53 Aligned_cols=62 Identities=13% Similarity=0.059 Sum_probs=53.7
Q ss_pred EEEehHHHHHHHHHHHhcCCCceEEcCC---eeEEEeeCCCCCCcccCCCCccccccccCCeeE-EEeCCCcEEEeeE-E
Q 010225 166 CVVENKVLHSSLLSCMQNTEFQKTIYPS---RLTSMALLPSSSSISVDSTPSATTLFTKGHLAK-LDLSDGTSLYAKL-V 240 (514)
Q Consensus 166 ~~i~r~~l~~~L~~~~~~~g~v~v~~~~---~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~g~~~~ad~-V 240 (514)
..++...+...|.+.+++.| ++|++++ +|++++. +++.+. |.+.+|.++.||. |
T Consensus 156 g~~~~~~~~~~L~~~a~~~G-v~i~~~t~~~~V~~i~~--------------------~~~~v~gV~t~~G~~i~Ad~VV 214 (438)
T 3dje_A 156 GWAHARNALVAAAREAQRMG-VKFVTGTPQGRVVTLIF--------------------ENNDVKGAVTADGKIWRAERTF 214 (438)
T ss_dssp EEECHHHHHHHHHHHHHHTT-CEEEESTTTTCEEEEEE--------------------ETTEEEEEEETTTEEEECSEEE
T ss_pred EEecHHHHHHHHHHHHHhcC-CEEEeCCcCceEEEEEe--------------------cCCeEEEEEECCCCEEECCEEE
Confidence 45677899999999999988 9999999 9999987 345565 8999998899999 9
Q ss_pred EecCCCch
Q 010225 241 GADGGKSR 248 (514)
Q Consensus 241 ~AdG~~S~ 248 (514)
.|+|.+|.
T Consensus 215 ~AtG~~s~ 222 (438)
T 3dje_A 215 LCAGASAG 222 (438)
T ss_dssp ECCGGGGG
T ss_pred ECCCCChh
Confidence 99999985
No 42
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.46 E-value=8e-12 Score=125.08 Aligned_cols=71 Identities=13% Similarity=0.201 Sum_probs=58.0
Q ss_pred EEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCccccccccCCeeEEEeCCC--cEEEeeE-EEe
Q 010225 166 CVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDG--TSLYAKL-VGA 242 (514)
Q Consensus 166 ~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g--~~~~ad~-V~A 242 (514)
..++...+...|.+.+++.| ++|+++++|++++. +.++.+.|.+.+| .++.||. |.|
T Consensus 145 ~~~~~~~~~~~l~~~~~~~G-v~i~~~~~v~~i~~-------------------~~~~~~~v~~~~g~~~~~~a~~VV~A 204 (369)
T 3dme_A 145 GIVDSHALMLAYQGDAESDG-AQLVFHTPLIAGRV-------------------RPEGGFELDFGGAEPMTLSCRVLINA 204 (369)
T ss_dssp EEECHHHHHHHHHHHHHHTT-CEEECSCCEEEEEE-------------------CTTSSEEEEECTTSCEEEEEEEEEEC
T ss_pred EEECHHHHHHHHHHHHHHCC-CEEECCCEEEEEEE-------------------cCCceEEEEECCCceeEEEeCEEEEC
Confidence 45788999999999999988 99999999999987 1223477888888 3799999 999
Q ss_pred cCCCc-hhhhhh-CCC
Q 010225 243 DGGKS-RVRELA-GFK 256 (514)
Q Consensus 243 dG~~S-~vR~~l-~~~ 256 (514)
+|.+| .+.+.+ |.+
T Consensus 205 ~G~~s~~l~~~~~g~~ 220 (369)
T 3dme_A 205 AGLHAPGLARRIEGIP 220 (369)
T ss_dssp CGGGHHHHHHTEETSC
T ss_pred CCcchHHHHHHhcCCC
Confidence 99998 566666 654
No 43
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.42 E-value=1e-11 Score=128.81 Aligned_cols=73 Identities=18% Similarity=0.326 Sum_probs=49.9
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCC------cEEEEEcCCCCCCCCCCCCCC-CCC--CC--ceEEeChhhHHHHH
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKH------LSVAIIDSNPALGKSNFIKKE-DPP--DP--RVSTVTPATISFFK 122 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g------~~V~viE~~~~~~~~~~~~~~-~~~--~~--~~~~l~~~~~~~l~ 122 (514)
+.+||+|||||++||++|+.|++. | ++|+|||+++.++........ ... .+ ......+...++++
T Consensus 4 ~~~dVvIIGaGiaGLsaA~~L~~~----G~~~~~~~~V~vlEa~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~l~~ 79 (470)
T 3i6d_A 4 GKKHVVIIGGGITGLAAAFYMEKE----IKEKNLPLELTLVEASPRVGGKIQTVKKDGYIIERGPDSFLERKKSAPQLVK 79 (470)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHH----HTTTTCSEEEEEECSSSSSCTTCCEECCTTCCEESSCCCEETTCTHHHHHHH
T ss_pred CCCcEEEECCCHHHHHHHHHHHHh----ccccCCCCCEEEEECCCCCCceEEEeccCCEEeccChhhhhhCCHHHHHHHH
Confidence 358999999999999999999996 8 999999999877543221110 000 00 11222466778889
Q ss_pred HcCCcHHH
Q 010225 123 EIGAWQYV 130 (514)
Q Consensus 123 ~lgl~~~~ 130 (514)
++|+.+.+
T Consensus 80 ~lgl~~~~ 87 (470)
T 3i6d_A 80 DLGLEHLL 87 (470)
T ss_dssp HTTCCTTE
T ss_pred HcCCccee
Confidence 99886544
No 44
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.40 E-value=3.5e-11 Score=120.79 Aligned_cols=61 Identities=10% Similarity=0.179 Sum_probs=51.8
Q ss_pred EEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCccccccccCCeeEEEeCCCcEEEeeE-EEecC
Q 010225 166 CVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKL-VGADG 244 (514)
Q Consensus 166 ~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG 244 (514)
..++...+.+.|.+.+++.| ++++++++|++++. +++.+.|++.+|+ +.||. |.|+|
T Consensus 144 g~~~~~~l~~~l~~~~~~~G-~~i~~~~~V~~i~~--------------------~~~~~~v~~~~g~-~~a~~vV~a~G 201 (372)
T 2uzz_A 144 GFLRSELAIKTWIQLAKEAG-CAQLFNCPVTAIRH--------------------DDDGVTIETADGE-YQAKKAIVCAG 201 (372)
T ss_dssp EEEEHHHHHHHHHHHHHHTT-CEEECSCCEEEEEE--------------------CSSSEEEEESSCE-EEEEEEEECCG
T ss_pred cEEcHHHHHHHHHHHHHHCC-CEEEcCCEEEEEEE--------------------cCCEEEEEECCCe-EEcCEEEEcCC
Confidence 45778899999999999887 99999999999987 3345778887775 99999 99999
Q ss_pred CCch
Q 010225 245 GKSR 248 (514)
Q Consensus 245 ~~S~ 248 (514)
.+|.
T Consensus 202 ~~s~ 205 (372)
T 2uzz_A 202 TWVK 205 (372)
T ss_dssp GGGG
T ss_pred ccHH
Confidence 9874
No 45
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.39 E-value=3.7e-12 Score=134.90 Aligned_cols=71 Identities=18% Similarity=0.212 Sum_probs=55.5
Q ss_pred EEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCccccccccCCeeEEEeCC---C--cEEEeeE-
Q 010225 166 CVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSD---G--TSLYAKL- 239 (514)
Q Consensus 166 ~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~---g--~~~~ad~- 239 (514)
..++...+...|.+.+.+.| ++|+++++|+++.. +.+..+.|.+.+ | .++.||.
T Consensus 165 g~vd~~~l~~~L~~~a~~~G-~~i~~~~~V~~l~~-------------------~~g~v~gV~~~d~~tg~~~~i~A~~V 224 (561)
T 3da1_A 165 YRTDDARLTLEIMKEAVARG-AVALNYMKVESFIY-------------------DQGKVVGVVAKDRLTDTTHTIYAKKV 224 (561)
T ss_dssp EECCHHHHHHHHHHHHHHTT-CEEEESEEEEEEEE-------------------ETTEEEEEEEEETTTCCEEEEEEEEE
T ss_pred ceEcHHHHHHHHHHHHHHcC-CEEEcCCEEEEEEE-------------------cCCeEEEEEEEEcCCCceEEEECCEE
Confidence 36788999999999999988 99999999999987 122334455543 3 3699999
Q ss_pred EEecCCCc-hhhhhhCCC
Q 010225 240 VGADGGKS-RVRELAGFK 256 (514)
Q Consensus 240 V~AdG~~S-~vR~~l~~~ 256 (514)
|+|+|.+| .+++.++..
T Consensus 225 V~AaG~~s~~l~~~~g~~ 242 (561)
T 3da1_A 225 VNAAGPWVDTLREKDRSK 242 (561)
T ss_dssp EECCGGGHHHHHHTTTCC
T ss_pred EECCCcchHHHHHhcCCC
Confidence 99999999 677777654
No 46
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.39 E-value=2.8e-12 Score=130.54 Aligned_cols=155 Identities=20% Similarity=0.149 Sum_probs=93.0
Q ss_pred CCCCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCC-------CCCCCCCCCCce-EEeC-hhhHHHH
Q 010225 51 NNDDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSN-------FIKKEDPPDPRV-STVT-PATISFF 121 (514)
Q Consensus 51 ~~~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~-------~~~~~~~~~~~~-~~l~-~~~~~~l 121 (514)
|++..+||+|||||++|+++|+.|++. |++|+|||+.+.++... |........... ..-. ......+
T Consensus 23 M~~~~~dViIIGgG~AGl~aA~~La~~----G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l 98 (417)
T 3v76_A 23 MVAEKQDVVIIGAGAAGMMCAIEAGKR----GRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSAL 98 (417)
T ss_dssp -----CCEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHH
T ss_pred ccCCCCCEEEECcCHHHHHHHHHHHHC----CCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHH
Confidence 345679999999999999999999996 99999999998764211 100000000000 0000 1112333
Q ss_pred HHcCCcHHHHhhhccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeC
Q 010225 122 KEIGAWQYVQQHRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALL 201 (514)
Q Consensus 122 ~~lgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~ 201 (514)
..+...+.+.-.....+ .+...... .......+..+.+.|.+.+++.| ++|+++++|++++.
T Consensus 99 ~~~~~~~~~~~~~~~Gi---~~~~~~~g-------------~~~~~~~~~~l~~~L~~~l~~~G-v~i~~~~~V~~i~~- 160 (417)
T 3v76_A 99 ARYRPQDFVALVERHGI---GWHEKTLG-------------QLFCDHSAKDIIRMLMAEMKEAG-VQLRLETSIGEVER- 160 (417)
T ss_dssp HHSCHHHHHHHHHHTTC---CEEECSTT-------------EEEESSCHHHHHHHHHHHHHHHT-CEEECSCCEEEEEE-
T ss_pred HhcCHHHHHHHHHHcCC---CcEEeeCC-------------EEeeCCCHHHHHHHHHHHHHHCC-CEEEECCEEEEEEE-
Confidence 33332221111000000 01010000 00012357789999999999887 99999999999987
Q ss_pred CCCCCcccCCCCccccccccCCeeEEEeCCCcEEEeeE-EEecCCCc
Q 010225 202 PSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKS 247 (514)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S 247 (514)
.++.+.|.+.+| ++.||. |.|+|.+|
T Consensus 161 -------------------~~~~~~V~~~~g-~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 161 -------------------TASGFRVTTSAG-TVDAASLVVASGGKS 187 (417)
T ss_dssp -------------------ETTEEEEEETTE-EEEESEEEECCCCSS
T ss_pred -------------------eCCEEEEEECCc-EEEeeEEEECCCCcc
Confidence 445688888888 799999 99999999
No 47
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.37 E-value=4.5e-13 Score=138.24 Aligned_cols=171 Identities=23% Similarity=0.277 Sum_probs=98.4
Q ss_pred CCCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHH
Q 010225 52 NDDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQ 131 (514)
Q Consensus 52 ~~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~ 131 (514)
..+++||+|||||++|+++|+.|++. |.+|+||||.+.++............. .... ....+++.++....+.
T Consensus 23 ~~~~~dVvIIGgG~aGl~aA~~la~~----G~~V~llEk~~~~g~~~~~sg~g~~~~--~~~~-~~~~~~~~~~~~~~~~ 95 (447)
T 2i0z_A 23 NAMHYDVIVIGGGPSGLMAAIGAAEE----GANVLLLDKGNKLGRKLAISGGGRCNV--TNRL-PLDEIVKHIPGNGRFL 95 (447)
T ss_dssp --CCCSEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSSSCHHHHHTGGGTCCC--EECS-CHHHHHHTCTBTGGGG
T ss_pred ccCCCCEEEECCcHHHHHHHHHHHHC----CCCEEEEECCCCCCceeEEeCCCceec--cCcc-cHHHHHHHhccChHHH
Confidence 34568999999999999999999996 999999999886532110000000000 0000 0012222222111110
Q ss_pred hhhccCcc---eEEEEeCCCcceeeeccCCCCCcccEEEE----ehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCC
Q 010225 132 QHRHAYFD---KMQVWDYTGLGYTKYNARDVNKEILGCVV----ENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSS 204 (514)
Q Consensus 132 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i----~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~ 204 (514)
......+. .+.++...+. .+.. ...+..+ ....+.+.|.+.+++.| ++|+++++|+++..
T Consensus 96 ~~~~~~~~~~~~~~~~~~~G~---~~~~-----~~~g~~~p~~~~~~~l~~~L~~~~~~~G-V~i~~~~~V~~i~~---- 162 (447)
T 2i0z_A 96 YSAFSIFNNEDIITFFENLGV---KLKE-----EDHGRMFPVSNKAQSVVDALLTRLKDLG-VKIRTNTPVETIEY---- 162 (447)
T ss_dssp HHHHHHSCHHHHHHHHHHTTC---CEEE-----CGGGEEEETTCCHHHHHHHHHHHHHHTT-CEEECSCCEEEEEE----
T ss_pred HHHHHhcCHHHHHHHHHhcCC---ceEE-----eeCCEEECCCCCHHHHHHHHHHHHHHCC-CEEEeCcEEEEEEe----
Confidence 00000000 0000000000 0000 0011222 35788999999999887 99999999999986
Q ss_pred CCcccCCCCccccccccCCeeEEEeCCCcEEEeeE-EEecCCCc-----------hhhhhhCCCc
Q 010225 205 SSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKS-----------RVRELAGFKT 257 (514)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S-----------~vR~~l~~~~ 257 (514)
+++..+.|.+.+|.++.||. |.|+|.+| .+++.+|...
T Consensus 163 ---------------~~~~v~~V~~~~G~~i~Ad~VVlAtGg~s~~~~g~tG~g~~la~~~G~~~ 212 (447)
T 2i0z_A 163 ---------------ENGQTKAVILQTGEVLETNHVVIAVGGKSVPQTGSTGDGYAWAEKAGHTI 212 (447)
T ss_dssp ---------------ETTEEEEEEETTCCEEECSCEEECCCCSSSGGGSCSSHHHHHHHHTTCCE
T ss_pred ---------------cCCcEEEEEECCCCEEECCEEEECCCCCcCCCCCCCcHHHHHHHHCCCCc
Confidence 12233778888888899999 99999999 7888877654
No 48
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.36 E-value=1.1e-12 Score=137.46 Aligned_cols=145 Identities=16% Similarity=0.183 Sum_probs=91.2
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCC-----------CCC--------CC--CCCCCce-
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSN-----------FIK--------KE--DPPDPRV- 110 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~-----------~~~--------~~--~~~~~~~- 110 (514)
..++||+||||||+|+++|+.|++. |++|+|||+++.++.+. +.. .. ....+.-
T Consensus 105 ~~~~DVVIVGgGpaGL~aA~~La~~----G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~ 180 (549)
T 3nlc_A 105 NLTERPIVIGFGPCGLFAGLVLAQM----GFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLY 180 (549)
T ss_dssp TCCCCCEEECCSHHHHHHHHHHHHT----TCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC----CCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceE
Confidence 4568999999999999999999996 99999999986541000 000 00 0000000
Q ss_pred --E----EeChhhHHHHHHcCCcHHHHhhhccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcC
Q 010225 111 --S----TVTPATISFFKEIGAWQYVQQHRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNT 184 (514)
Q Consensus 111 --~----~l~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~ 184 (514)
. .......+.+...|....+... ..+..-......+.+.|.+.+++.
T Consensus 181 ~~i~~~~~~~~~v~~~~~~~G~~~~i~~~---------------------------~~p~~G~~~~~~l~~~L~~~l~~~ 233 (549)
T 3nlc_A 181 SQVKDPNFYGRKVITEFVEAGAPEEILYV---------------------------SKPHIGTFKLVTMIEKMRATIIEL 233 (549)
T ss_dssp CCSCCTTCHHHHHHHHHHHTTCCGGGGTB---------------------------SSCCCCHHHHHHHHHHHHHHHHHT
T ss_pred EEeccccccHHHHHHHHHHcCCCceEeec---------------------------cccccccchHHHHHHHHHHHHHhc
Confidence 0 0001222223333321111000 000001124577888999999988
Q ss_pred CCceEEcCCeeEEEeeCCCCCCcccCCCCccccccccCCeeEEEeCCCcEEEeeE-EEecCCCch
Q 010225 185 EFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKSR 248 (514)
Q Consensus 185 g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S~ 248 (514)
| ++|+++++|++++. +.+..+.|.+.+|+++.||+ |.|+|.+|.
T Consensus 234 G-v~I~~~t~V~~I~~-------------------~~~~v~gV~l~~G~~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 234 G-GEIRFSTRVDDLHM-------------------EDGQITGVTLSNGEEIKSRHVVLAVGHSAR 278 (549)
T ss_dssp T-CEEESSCCEEEEEE-------------------SSSBEEEEEETTSCEEECSCEEECCCTTCH
T ss_pred C-CEEEeCCEEEEEEE-------------------eCCEEEEEEECCCCEEECCEEEECCCCChh
Confidence 7 99999999999987 12234568889999999999 999999995
No 49
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.34 E-value=5.2e-11 Score=118.22 Aligned_cols=36 Identities=33% Similarity=0.398 Sum_probs=33.2
Q ss_pred ccEEEECCCHHHHHHHHHhcc---CCCCCCcEEEEEcCCCCCC
Q 010225 56 YDVAVVGGGMVGMALACSLAS---MPLTKHLSVAIIDSNPALG 95 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~---~~~~~g~~V~viE~~~~~~ 95 (514)
+||+|||||++|+++|+.|++ . |++|+||||++..+
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~----G~~V~v~Ek~~~~g 40 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSG----PLYLAVWDKADDSG 40 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-C----CEEEEEECSSSSSC
T ss_pred CcEEEECCcHHHHHHHHHHHhhccC----CceEEEEECCCCCc
Confidence 589999999999999999999 7 99999999987664
No 50
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.33 E-value=8.9e-12 Score=121.94 Aligned_cols=162 Identities=17% Similarity=0.254 Sum_probs=98.3
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhh
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQH 133 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~ 133 (514)
..+||+||||||+|+++|+.|++.. .|++|+|||+...++...|... .......+.+....+|+++|+.
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~--~G~~V~LiEk~~~~GGg~~~~g---~~~~~~~~~~~~~~~L~~~Gv~------ 146 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLR--PDLRITIVEAGVAPGGGAWLGG---QLFSAMVMRKPADVFLDEVGVP------ 146 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHC--TTSCEEEEESSSSCCTTTTCCB---TTCCCEEEETTTHHHHHHHTCC------
T ss_pred CcCCEEEECccHHHHHHHHHHHhcC--CCCEEEEEeCCCccCCccccCC---ccchhhhcchHHHHHHHHcCCc------
Confidence 4689999999999999999999831 2899999999987754333111 1122334446667777777752
Q ss_pred hccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCC-CcccCCC
Q 010225 134 RHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSS-SISVDST 212 (514)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~-~~~~~~~ 212 (514)
+.. .+ . +....+..++.+.|.+.+.+..+++++++++|+++..++... +.....+
T Consensus 147 ----~~~------~G--~------------~~~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~ 202 (344)
T 3jsk_A 147 ----YED------EG--D------------YVVVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDD 202 (344)
T ss_dssp ----CEE------CS--S------------EEEESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------
T ss_pred ----ccc------cC--C------------eEEEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccc
Confidence 110 00 0 001123577889999999886559999999999998732100 0000000
Q ss_pred CccccccccC--CeeEEEe------C--------CCcEEEeeE-EEecCCCchhhhhh
Q 010225 213 PSATTLFTKG--HLAKLDL------S--------DGTSLYAKL-VGADGGKSRVRELA 253 (514)
Q Consensus 213 ~~~~~~~~~~--~~~~v~~------~--------~g~~~~ad~-V~AdG~~S~vR~~l 253 (514)
... ...+ ....|.. . +..+++|++ |+|||..|++++.+
T Consensus 203 g~~---~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~Ak~VV~ATG~~s~v~~~~ 257 (344)
T 3jsk_A 203 GEA---EDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTINAPVIISTTGHDGPFGAFS 257 (344)
T ss_dssp ---------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEECSEEEECCCSSSSSSCHH
T ss_pred ccc---ccCCCceEeEEEeeeeeeeccCCcccccCceEEEcCEEEECCCCCchhhHHH
Confidence 000 0001 1122222 1 234799999 99999999976655
No 51
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.32 E-value=2.8e-12 Score=130.55 Aligned_cols=70 Identities=11% Similarity=0.049 Sum_probs=53.2
Q ss_pred EEEehHHHHHHHHHHHhcCCCceEEcCCeeE---------EEeeCCCCCCcccCCCCccccccccCCeeEEEeCCCcEEE
Q 010225 166 CVVENKVLHSSLLSCMQNTEFQKTIYPSRLT---------SMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLY 236 (514)
Q Consensus 166 ~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~---------~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~ 236 (514)
..++...+...|.+.+++.| ++++++++|+ +++. +++.+.|.+.+| ++.
T Consensus 167 g~v~~~~l~~~L~~~~~~~G-v~i~~~~~v~~~~g~~~~~~i~~--------------------~~~~v~v~~~~g-~i~ 224 (405)
T 3c4n_A 167 LTYRPGSLALLAAQQAIGQG-AGLLLNTRAELVPGGVRLHRLTV--------------------TNTHQIVVHETR-QIR 224 (405)
T ss_dssp EEECHHHHHHHHHHHHHTTT-CEEECSCEEEEETTEEEEECBCC---------------------------CBCCE-EEE
T ss_pred EEEcHHHHHHHHHHHHHHCC-CEEEcCCEEEeccccccccceEe--------------------eCCeEEEEECCc-EEE
Confidence 45788999999999999887 9999999999 7765 223456666666 799
Q ss_pred eeE-EEecCCCc-hhhh-hhCCCc
Q 010225 237 AKL-VGADGGKS-RVRE-LAGFKT 257 (514)
Q Consensus 237 ad~-V~AdG~~S-~vR~-~l~~~~ 257 (514)
||. |.|+|.+| .+++ .++...
T Consensus 225 a~~VV~A~G~~s~~l~~~~~g~~~ 248 (405)
T 3c4n_A 225 AGVIIVAAGAAGPALVEQGLGLHT 248 (405)
T ss_dssp EEEEEECCGGGHHHHHHHHHCCCC
T ss_pred CCEEEECCCccHHHHHHHhcCCCC
Confidence 999 99999999 6877 776543
No 52
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.32 E-value=3.2e-11 Score=116.53 Aligned_cols=144 Identities=20% Similarity=0.274 Sum_probs=94.8
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhh
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQH 133 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~ 133 (514)
..+||+|||||++|+++|+.|++. .|++|+|||+.+.++...+.... ......+.....+.|+++|+
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~---~G~~V~viEk~~~~gg~~~~~~~---~~~~~~~~~~~~~~l~~~G~------- 104 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKN---PNVQVAIIEQSVSPGGGAWLGGQ---LFSAMIVRKPAHLFLDEIGV------- 104 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTS---TTSCEEEEESSSSCCTTTTCCST---TCCCEEEETTTHHHHHHHTC-------
T ss_pred cccCEEEECccHHHHHHHHHHHHc---CCCeEEEEECCCCCCCceecCCc---chHHHHcCcHHHHHHHHcCC-------
Confidence 468999999999999999999994 28999999999877533221111 11123334445556655553
Q ss_pred hccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCC
Q 010225 134 RHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTP 213 (514)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~ 213 (514)
++.. .+ .+....+...+...|.+.+.+..+++++++++|+++..
T Consensus 105 ---~~~~------~~--------------~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~------------- 148 (284)
T 1rp0_A 105 ---AYDE------QD--------------TYVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIV------------- 148 (284)
T ss_dssp ---CCEE------CS--------------SEEEESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEE-------------
T ss_pred ---Cccc------CC--------------CEEEecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEe-------------
Confidence 1110 00 00012256788888998887643499999999999986
Q ss_pred ccccccccCCee-EEEeC---------CC-----cEEEeeE-EEecCCCchhhhhh
Q 010225 214 SATTLFTKGHLA-KLDLS---------DG-----TSLYAKL-VGADGGKSRVRELA 253 (514)
Q Consensus 214 ~~~~~~~~~~~~-~v~~~---------~g-----~~~~ad~-V~AdG~~S~vR~~l 253 (514)
+++.+ .|.+. +| .++.||. |.|+|.+|.++...
T Consensus 149 -------~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~~~~ 197 (284)
T 1rp0_A 149 -------KGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATG 197 (284)
T ss_dssp -------ETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTTTTHH
T ss_pred -------cCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHHHHHH
Confidence 22222 33321 22 4799999 99999999987654
No 53
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=99.30 E-value=6.8e-11 Score=118.38 Aligned_cols=39 Identities=31% Similarity=0.389 Sum_probs=34.7
Q ss_pred CCCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 52 NDDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 52 ~~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
|.+++||+|||||++|+++|+.|++. |++|+|||+....
T Consensus 3 m~~~~dVvVIG~Gi~Gls~A~~La~~----G~~V~vle~~~~~ 41 (363)
T 1c0p_A 3 MHSQKRVVVLGSGVIGLSSALILARK----GYSVHILARDLPE 41 (363)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHT----TCEEEEEESSCTT
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHhC----CCEEEEEeccCCC
Confidence 34578999999999999999999996 9999999998743
No 54
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.29 E-value=2.1e-11 Score=125.84 Aligned_cols=85 Identities=16% Similarity=0.239 Sum_probs=56.3
Q ss_pred EEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCccccccccCCeeEEEeCCCcEE--EeeE-EEe
Q 010225 166 CVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSL--YAKL-VGA 242 (514)
Q Consensus 166 ~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~--~ad~-V~A 242 (514)
..++...+...|.+.+++.| ++|+++++|++++.... ....+...+.. .+.+..+.|.+.+| ++ .||. |.|
T Consensus 176 ~~~~~~~l~~~L~~~~~~~G-v~i~~~~~V~~i~~~~~-~~~~~~~~~~~---~~~~~v~~V~t~~g-~i~~~Ad~VV~A 249 (448)
T 3axb_A 176 GFLDAEKVVDYYYRRASGAG-VEFIFGRRVVGVELKPR-VELGIEGEPLP---WQEARASAAVLSDG-TRVEVGEKLVVA 249 (448)
T ss_dssp EECCHHHHHHHHHHHHHHTT-CEEEESCCEEEEEEEES-SCCCCTTSSCT---TSCEEEEEEEETTS-CEEEEEEEEEEC
T ss_pred eEEcHHHHHHHHHHHHHhCC-CEEEcCCeEEEEEeccc-ccccccccccc---cCCCceEEEEeCCC-EEeecCCEEEEC
Confidence 45678899999999999988 99999999999975100 00000000000 00112346777777 58 9999 999
Q ss_pred cCCCch-hhhhhCCC
Q 010225 243 DGGKSR-VRELAGFK 256 (514)
Q Consensus 243 dG~~S~-vR~~l~~~ 256 (514)
+|.+|. +.+.++..
T Consensus 250 tG~~s~~l~~~~g~~ 264 (448)
T 3axb_A 250 AGVWSNRLLNPLGID 264 (448)
T ss_dssp CGGGHHHHHGGGTCC
T ss_pred CCcCHHHHHHHcCCC
Confidence 999987 66666543
No 55
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.28 E-value=7.9e-12 Score=126.75 Aligned_cols=150 Identities=17% Similarity=0.202 Sum_probs=89.6
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCC-------CCCCCCCCCCCce-EEeChh-hHHHHHHc
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKS-------NFIKKEDPPDPRV-STVTPA-TISFFKEI 124 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~-------~~~~~~~~~~~~~-~~l~~~-~~~~l~~l 124 (514)
+++||+|||||++|+++|+.|++. |.+|+|||+++.++.. .|........... ..-.+. ....+..+
T Consensus 3 ~~~dViIIGgG~aGl~aA~~la~~----G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~ 78 (401)
T 2gqf_A 3 QYSENIIIGAGAAGLFCAAQLAKL----GKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARY 78 (401)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHS
T ss_pred CCCCEEEECCcHHHHHHHHHHHhC----CCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhC
Confidence 368999999999999999999996 9999999999866321 1100000000000 000000 11122222
Q ss_pred CCcH---HHHhhhccCcceEEEEeCCCcceeeeccCCCCCcccEEEE---ehHHHHHHHHHHHhcCCCceEEcCCeeEEE
Q 010225 125 GAWQ---YVQQHRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVV---ENKVLHSSLLSCMQNTEFQKTIYPSRLTSM 198 (514)
Q Consensus 125 gl~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i---~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v 198 (514)
...+ .+...+. + +..... +..+ ....+.+.|.+.+++.| ++|+++++|+++
T Consensus 79 ~~~~~~~~~~~~Gi-~-----~~~~~~----------------g~~~p~~~~~~l~~~L~~~~~~~G-v~i~~~~~v~~i 135 (401)
T 2gqf_A 79 TNWDFISLVAEQGI-T-----YHEKEL----------------GQLFCDEGAEQIVEMLKSECDKYG-AKILLRSEVSQV 135 (401)
T ss_dssp CHHHHHHHHHHTTC-C-----EEECST----------------TEEEETTCTHHHHHHHHHHHHHHT-CEEECSCCEEEE
T ss_pred CHHHHHHHHHhCCC-c-----eEECcC----------------CEEccCCCHHHHHHHHHHHHHHCC-CEEEeCCEEEEE
Confidence 2111 1111111 0 000000 0111 56888899999998887 999999999999
Q ss_pred eeCCCCCCcccCCCCccccccccCCeeEEEeCCCcEEEeeE-EEecCCCc
Q 010225 199 ALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKS 247 (514)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S 247 (514)
..+ .+. .++.+.|.+.+| +++||. |.|+|.+|
T Consensus 136 ~~~---------~~g-------~~~~~~v~~~~g-~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 136 ERI---------QND-------EKVRFVLQVNST-QWQCKNLIVATGGLS 168 (401)
T ss_dssp EEC---------CSC-------SSCCEEEEETTE-EEEESEEEECCCCSS
T ss_pred Ecc---------cCc-------CCCeEEEEECCC-EEECCEEEECCCCcc
Confidence 861 000 024577887777 799999 99999999
No 56
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.28 E-value=7.7e-11 Score=122.47 Aligned_cols=72 Identities=18% Similarity=0.290 Sum_probs=49.5
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCC--cEEEEEcCCCCCCCCCCCCCC-CCC--C--CceEEeChhhHHHHHHcCCc
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKH--LSVAIIDSNPALGKSNFIKKE-DPP--D--PRVSTVTPATISFFKEIGAW 127 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g--~~V~viE~~~~~~~~~~~~~~-~~~--~--~~~~~l~~~~~~~l~~lgl~ 127 (514)
.+||+|||||++||++|+.|++. | ++|+|+|+.+.++........ ... . .......+...++++++|+.
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~----g~~~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~l~~~lg~~ 79 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERA----FPDLNITLLEAGERLGGKVATYREDGFTIERGPDSYVARKHILTDLIEAIGLG 79 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHH----CTTSEEEEECSSSSSBTTCCEECSTTCCEESSCCCEETTSTHHHHHHHHTTCG
T ss_pred cccEEEECCCHHHHHHHHHHHHh----CCCCCEEEEECCCCCCceeEEEeeCCEEEecCchhhhcccHHHHHHHHHcCCc
Confidence 57999999999999999999996 7 999999998876532211000 000 0 01122345677889999886
Q ss_pred HHH
Q 010225 128 QYV 130 (514)
Q Consensus 128 ~~~ 130 (514)
..+
T Consensus 80 ~~~ 82 (475)
T 3lov_A 80 EKL 82 (475)
T ss_dssp GGE
T ss_pred ceE
Confidence 544
No 57
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.25 E-value=4.6e-11 Score=107.05 Aligned_cols=117 Identities=22% Similarity=0.249 Sum_probs=88.4
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhhhc
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRH 135 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~~ 135 (514)
+||+|||||++|+.+|..|++. |.+|+|+|+.+..-. . ...+ .
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~----g~~v~lie~~~~~~~----------~--~~~~-----------~---------- 44 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARA----GLKVLVLDGGRSKVK----------G--VSRV-----------P---------- 44 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT----TCCEEEEECSCCTTT----------T--CSCC-----------C----------
T ss_pred CeEEEECCCHHHHHHHHHHHHC----CCcEEEEeCCCCccc----------C--chhh-----------h----------
Confidence 6999999999999999999996 999999999873310 0 0000 0
Q ss_pred cCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCcc
Q 010225 136 AYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSA 215 (514)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~~ 215 (514)
.+ .+ ++ . .+....+.+.+.+.+++.+ ++++++ +|++++.
T Consensus 45 -~~--------~~-----~~-----~-----~~~~~~~~~~l~~~~~~~g-v~v~~~-~v~~i~~--------------- 83 (180)
T 2ywl_A 45 -NY--------PG-----LL-----D-----EPSGEELLRRLEAHARRYG-AEVRPG-VVKGVRD--------------- 83 (180)
T ss_dssp -CS--------TT-----CT-----T-----CCCHHHHHHHHHHHHHHTT-CEEEEC-CCCEEEE---------------
T ss_pred -cc--------CC-----Cc-----C-----CCCHHHHHHHHHHHHHHcC-CEEEeC-EEEEEEE---------------
Confidence 00 00 00 0 1346788899999999887 999999 9999986
Q ss_pred ccccccCCeeEEEeCCCcEEEeeE-EEecCCCchhhhhhCCC
Q 010225 216 TTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKSRVRELAGFK 256 (514)
Q Consensus 216 ~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S~vR~~l~~~ 256 (514)
+++.+.+.+++| ++.||+ |.|+|.++.+++.++.+
T Consensus 84 -----~~~~~~v~~~~g-~i~ad~vI~A~G~~~~~~~~~g~~ 119 (180)
T 2ywl_A 84 -----MGGVFEVETEEG-VEKAERLLLCTHKDPTLPSLLGLT 119 (180)
T ss_dssp -----CSSSEEEECSSC-EEEEEEEEECCTTCCHHHHHHTCC
T ss_pred -----cCCEEEEEECCC-EEEECEEEECCCCCCCccccCCCC
Confidence 334578888888 899999 99999999888877653
No 58
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.23 E-value=8.5e-12 Score=132.51 Aligned_cols=155 Identities=17% Similarity=0.177 Sum_probs=93.8
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcH----
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQ---- 128 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~---- 128 (514)
..++||+|||||++||++|+.|++. |.+|+||||.+.++..+.. .+.+.... .....+.+|+.+
T Consensus 119 ~~~~DVvVVG~G~aGl~aA~~la~~----G~~V~vlEk~~~~gg~s~~------s~gg~~~~--~~~~~~~~g~~ds~~~ 186 (566)
T 1qo8_A 119 SETTQVLVVGAGSAGFNASLAAKKA----GANVILVDKAPFSGGNSMI------SAGGMNAV--GTKQQTAHGVEDKVEW 186 (566)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHH----TCCEEEECSSSSSCTTGGG------CCSCEECS--SCHHHHHTTCCCCHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHC----CCcEEEEeCCCCCCCcccc------cCceeEcc--CCHHHHHhCCCCCHHH
Confidence 4568999999999999999999996 9999999999877432210 01111111 111112222111
Q ss_pred ------------------------------HHHhhhccCcceEEEEeCCCcceeeeccCCCCCcccEEE-----EehHHH
Q 010225 129 ------------------------------YVQQHRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCV-----VENKVL 173 (514)
Q Consensus 129 ------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----i~r~~l 173 (514)
.+.+.+. ++..+... .+ ...+..+. +....+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~Gv-~~~~~~~~--~g-----------~~~~r~~~~~~~~~~~~~l 252 (566)
T 1qo8_A 187 FIEDAMKGGRQQNDIKLVTILAEQSADGVQWLESLGA-NLDDLKRS--GG-----------ARVDRTHRPHGGKSSGPEI 252 (566)
T ss_dssp HHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTC-CCCEEECC--TT-----------CSSCCEEECSSSSCHHHHH
T ss_pred HHHHHHHhcCCCCCHHHHHHHHhccHHHHHHHHhcCC-cccccccc--CC-----------CCCCceeecCCCCCCHHHH
Confidence 1111111 11111000 00 00001111 346789
Q ss_pred HHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCcccccccc-CCe--eEEEeCCCc--EEEeeE-EEecCCCc
Q 010225 174 HSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTK-GHL--AKLDLSDGT--SLYAKL-VGADGGKS 247 (514)
Q Consensus 174 ~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~v~~~~g~--~~~ad~-V~AdG~~S 247 (514)
.+.|.+.+++.+ ++|+++++|+++.. ++ +.. +.+...+|+ ++.||. |.|+|.+|
T Consensus 253 ~~~L~~~~~~~g-v~i~~~~~v~~l~~-------------------~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s 312 (566)
T 1qo8_A 253 IDTLRKAAKEQG-IDTRLNSRVVKLVV-------------------NDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYG 312 (566)
T ss_dssp HHHHHHHHHHTT-CCEECSEEEEEEEE-------------------CTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHhcC-CEEEeCCEEEEEEE-------------------CCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCcc
Confidence 999999999887 99999999999987 11 232 333334675 689999 99999999
Q ss_pred hhhhhh
Q 010225 248 RVRELA 253 (514)
Q Consensus 248 ~vR~~l 253 (514)
..++++
T Consensus 313 ~~~~~~ 318 (566)
T 1qo8_A 313 MNKEMI 318 (566)
T ss_dssp TCHHHH
T ss_pred cCHHHH
Confidence 876654
No 59
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.23 E-value=1.7e-10 Score=119.87 Aligned_cols=39 Identities=31% Similarity=0.515 Sum_probs=34.7
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCc--EEEEEcCCCCCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHL--SVAIIDSNPALGKS 97 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~--~V~viE~~~~~~~~ 97 (514)
.+||+|||||++||++|+.|++. |+ +|+|||+++.++..
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~~----G~~~~V~vlEa~~~~GG~ 42 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSRA----PCPPKVVLVESSERLGGW 42 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHTS----SSCCEEEEECSSSSSBTT
T ss_pred CceEEEECCcHHHHHHHHHHHhC----CCCCcEEEEeCCCCCCCc
Confidence 36999999999999999999996 88 99999998877543
No 60
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.22 E-value=7.1e-11 Score=120.84 Aligned_cols=60 Identities=15% Similarity=0.121 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCccccccccCCeeE-EEeCCCcEEEeeE-EEecCCCch
Q 010225 171 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAK-LDLSDGTSLYAKL-VGADGGKSR 248 (514)
Q Consensus 171 ~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~g~~~~ad~-V~AdG~~S~ 248 (514)
..+.+.|.+.+++.| ++|+++++|++|+. +++.+. |.+ +|.++.||. |.|.|.+..
T Consensus 196 ~~l~~~l~~~~~~~G-~~i~~~~~V~~i~~--------------------~~~~~~gv~~-~g~~~~ad~VV~a~~~~~~ 253 (425)
T 3ka7_A 196 KGIIDALETVISANG-GKIHTGQEVSKILI--------------------ENGKAAGIIA-DDRIHDADLVISNLGHAAT 253 (425)
T ss_dssp HHHHHHHHHHHHHTT-CEEECSCCEEEEEE--------------------ETTEEEEEEE-TTEEEECSEEEECSCHHHH
T ss_pred HHHHHHHHHHHHHcC-CEEEECCceeEEEE--------------------ECCEEEEEEE-CCEEEECCEEEECCCHHHH
Confidence 557788888888888 89999999999987 334454 666 477899999 999998766
Q ss_pred hhhhh
Q 010225 249 VRELA 253 (514)
Q Consensus 249 vR~~l 253 (514)
.+ .+
T Consensus 254 ~~-ll 257 (425)
T 3ka7_A 254 AV-LC 257 (425)
T ss_dssp HH-HT
T ss_pred HH-hc
Confidence 53 44
No 61
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.22 E-value=7.6e-11 Score=110.30 Aligned_cols=130 Identities=20% Similarity=0.206 Sum_probs=89.0
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhh
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQH 133 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~ 133 (514)
+++||+|||||++|+.+|+.|++. |.+|+|||+........| . . ....+.. ..+++++.
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~----g~~v~lie~~~~~~G~~~--~---~--~~~~~~~--~~~~~~~~-------- 60 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQK----GVRVGLLTQSLDAVMMPF--L---P--PKPPFPP--GSLLERAY-------- 60 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHT----TCCEEEEESCGGGTTCCS--S---C--CCSCCCT--TCHHHHHC--------
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC----CCCEEEEecCCCcCCccc--C---c--cccccch--hhHHhhhc--------
Confidence 368999999999999999999996 999999999843211111 0 0 0000000 00111110
Q ss_pred hccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCC
Q 010225 134 RHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTP 213 (514)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~ 213 (514)
+ . ..+ ++..+.+.|.+.+++.++++++ +++|++++.
T Consensus 61 -----------d------------~--~g~-----~~~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~------------- 96 (232)
T 2cul_A 61 -----------D------------P--KDE-----RVWAFHARAKYLLEGLRPLHLF-QATATGLLL------------- 96 (232)
T ss_dssp -----------C------------T--TCC-----CHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEE-------------
T ss_pred -----------c------------C--CCC-----CHHHHHHHHHHHHHcCCCcEEE-EeEEEEEEE-------------
Confidence 0 0 000 6888999999999987449988 569999976
Q ss_pred ccccccccCCe-eEEEeCCCcEEEeeE-EEecCCCchhhhhhCC
Q 010225 214 SATTLFTKGHL-AKLDLSDGTSLYAKL-VGADGGKSRVRELAGF 255 (514)
Q Consensus 214 ~~~~~~~~~~~-~~v~~~~g~~~~ad~-V~AdG~~S~vR~~l~~ 255 (514)
+++. +.|.+.+|.++.||+ |.|+|.+|..+..+|.
T Consensus 97 -------~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~~~~~G~ 133 (232)
T 2cul_A 97 -------EGNRVVGVRTWEGPPARGEKVVLAVGSFLGARLFLGG 133 (232)
T ss_dssp -------ETTEEEEEEETTSCCEECSEEEECCTTCSSCEEEETT
T ss_pred -------eCCEEEEEEECCCCEEECCEEEECCCCChhhceecCC
Confidence 2233 467788888899999 9999999988876654
No 62
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=99.21 E-value=1.3e-10 Score=113.15 Aligned_cols=152 Identities=19% Similarity=0.236 Sum_probs=97.1
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHh
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQ 132 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~ 132 (514)
...+||+||||||+|+++|+.|++.+ .|++|+|+|+++.++...|.... ......+.+.....|+++|+.
T Consensus 63 ~~~~dv~IiG~G~aGl~aA~~la~~~--~g~~V~v~e~~~~~ggg~~~~g~---~~~~~~~~~~~~~~L~~~Gv~----- 132 (326)
T 2gjc_A 63 FAVSDVIIVGAGSSGLSAAYVIAKNR--PDLKVCIIESSVAPGGGSWLGGQ---LFSAMVMRKPAHLFLQELEIP----- 132 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHHHC--TTSCEEEECSSSSCCTTTTCCGG---GCCCEEEETTTHHHHHHTTCC-----
T ss_pred cCcCCEEEECccHHHHHHHHHHHhcC--CCCeEEEEecCccccccccccCc---ccchhhhhhHHHHHHHhhCcc-----
Confidence 34679999999999999999999841 28999999999877543332111 112234445566667666641
Q ss_pred hhccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCC
Q 010225 133 HRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDST 212 (514)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~ 212 (514)
+.. .+ . ..+..+...+...|.+.+.+.++++++.+++|+++..++ +
T Consensus 133 -----~~~------~g--~------------~~~~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~---------~ 178 (326)
T 2gjc_A 133 -----YED------EG--D------------YVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRP---------P 178 (326)
T ss_dssp -----CEE------CS--S------------EEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECC---------C
T ss_pred -----ccc------CC--C------------eEEEcchHHHHHHHHHHHHHhcCcEEEecceeeeeeecc---------c
Confidence 110 00 0 001124567889999999887569999999999998721 0
Q ss_pred CccccccccC--CeeEEEe--------------CCCcEEEe---------------eE-EEecCCCchhhhhhC
Q 010225 213 PSATTLFTKG--HLAKLDL--------------SDGTSLYA---------------KL-VGADGGKSRVRELAG 254 (514)
Q Consensus 213 ~~~~~~~~~~--~~~~v~~--------------~~g~~~~a---------------d~-V~AdG~~S~vR~~l~ 254 (514)
.+ .+ ....|.. .++.++.| |+ |+|+|..|++.+.+.
T Consensus 179 ~~------~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~~~~~~VV~ATG~~~~~~~~~~ 246 (326)
T 2gjc_A 179 TE------KGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFCA 246 (326)
T ss_dssp C-----------CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCSSTTCCEEEECCCCC--CCSHHH
T ss_pred cc------CCCcEEEEEEecceeecccccceeccCceEEEEeeccccccccccccCCEEEECcCCCchHHHHHH
Confidence 00 01 1222222 13457999 99 999999999887763
No 63
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.20 E-value=1.3e-10 Score=122.70 Aligned_cols=158 Identities=14% Similarity=0.187 Sum_probs=99.2
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC-CCCCCCCCCCCCCCCCceEEeC-hhhHHHHHHcCC-cHHH
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP-ALGKSNFIKKEDPPDPRVSTVT-PATISFFKEIGA-WQYV 130 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~-~~~~~~~~~~~~~~~~~~~~l~-~~~~~~l~~lgl-~~~~ 130 (514)
..+||+|||||++|+++|+.|++. |.+|+|||++. ..+..+|. +...++. ....+.++.+|- ...+
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~----G~kVlLIEk~~~~iG~~~Cn-------ps~ggia~~~lv~ei~algg~~~~~ 95 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARM----GQQTLLLTHNIDTLGQMSCN-------PAIGGIGKGHLVKEVDALGGLMAKA 95 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHT----TCCEEEEESCGGGTTCCSSS-------SEEESTTHHHHHHHHHHTTCSHHHH
T ss_pred CcCCEEEECChHHHHHHHHHHHhC----CCCEEEEeeccccccccccc-------ccccchhhHHHHHHHHHhccHHHHH
Confidence 569999999999999999999996 99999999985 34333331 1111111 122233444432 2222
Q ss_pred HhhhccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccC
Q 010225 131 QQHRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVD 210 (514)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~ 210 (514)
..... ..+...+.... . ........+++..+...|.+.+++..+++| ++.+|+++..
T Consensus 96 ~d~~g---i~f~~l~~~kg-p--------av~~~r~~~Dr~~~~~~L~e~Le~~~GV~I-~~~~V~~L~~---------- 152 (651)
T 3ces_A 96 IDQAG---IQFRILNASKG-P--------AVRATRAQADRVLYRQAVRTALENQPNLMI-FQQAVEDLIV---------- 152 (651)
T ss_dssp HHHHE---EEEEEESTTSC-G--------GGCEEEEEECHHHHHHHHHHHHHTCTTEEE-EECCEEEEEE----------
T ss_pred hhhcc---cchhhhhcccC-c--------ccccchhhCCHHHHHHHHHHHHHhCCCCEE-EEEEEEEEEe----------
Confidence 11110 01111111100 0 011123468899999999999988544998 5679999976
Q ss_pred CCCccccccccCCeeEEEeCCCcEEEeeE-EEecCCCchhhhhhC
Q 010225 211 STPSATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKSRVRELAG 254 (514)
Q Consensus 211 ~~~~~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S~vR~~l~ 254 (514)
+.+..+.|.+.+|.++.||. |.|+|.+|..+...|
T Consensus 153 ---------e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~~~~i~G 188 (651)
T 3ces_A 153 ---------ENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIG 188 (651)
T ss_dssp ---------SSSBEEEEEETTSEEEEEEEEEECCSTTTCCEEECC
T ss_pred ---------cCCEEEEEEECCCCEEECCEEEEcCCCCccCccccC
Confidence 12234568888888899999 999999998776544
No 64
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.19 E-value=4.7e-10 Score=116.58 Aligned_cols=75 Identities=25% Similarity=0.298 Sum_probs=48.9
Q ss_pred CCCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCC---CCCceEEe--ChhhHHHHHHcCC
Q 010225 52 NDDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDP---PDPRVSTV--TPATISFFKEIGA 126 (514)
Q Consensus 52 ~~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~---~~~~~~~l--~~~~~~~l~~lgl 126 (514)
....+||+|||||++||++|+.|++. |++|+|+|+.+.++.......... ..+..... .+...++++++|+
T Consensus 13 ~~~~~~v~iiG~G~~Gl~aa~~l~~~----g~~v~v~E~~~~~GGr~~t~~~~g~~~~~g~~~~~~~~~~~~~~~~~~gl 88 (478)
T 2ivd_A 13 RTTGMNVAVVGGGISGLAVAHHLRSR----GTDAVLLESSARLGGAVGTHALAGYLVEQGPNSFLDREPATRALAAALNL 88 (478)
T ss_dssp ----CCEEEECCBHHHHHHHHHHHTT----TCCEEEECSSSSSBTTCCEEEETTEEEESSCCCEETTCHHHHHHHHHTTC
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHC----CCCEEEEEcCCCCCceeeeeccCCeeeecChhhhhhhhHHHHHHHHHcCC
Confidence 44578999999999999999999996 999999999987753321100000 00000111 4667888999998
Q ss_pred cHHH
Q 010225 127 WQYV 130 (514)
Q Consensus 127 ~~~~ 130 (514)
.+.+
T Consensus 89 ~~~~ 92 (478)
T 2ivd_A 89 EGRI 92 (478)
T ss_dssp GGGE
T ss_pred ccee
Confidence 5443
No 65
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.19 E-value=5.7e-11 Score=118.18 Aligned_cols=129 Identities=19% Similarity=0.286 Sum_probs=87.6
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhhh
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (514)
.+||+|||||++|+++|+.|++. |++|+|||+.+.++.... . .++.+
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~----g~~v~vie~~~~~gg~~~----------------~---------~~~~~---- 49 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRS----GLSYVILDAEASPGGAWQ----------------H---------AWHSL---- 49 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHS----SCCEEEECCSSSSSGGGG----------------G---------SCTTC----
T ss_pred cCCEEEECcCHHHHHHHHHHHHC----CCCEEEEECCCCCCCccc----------------C---------CCCCc----
Confidence 58999999999999999999996 999999999986631110 0 00000
Q ss_pred ccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCc
Q 010225 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (514)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~ 214 (514)
.+..... ...+...... .......++..+..+|.+.+++.+ ++++++++|++++.
T Consensus 50 -------~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~v~~i~~-------------- 104 (357)
T 4a9w_A 50 -------HLFSPAG--WSSIPGWPMP-ASQGPYPARAEVLAYLAQYEQKYA-LPVLRPIRVQRVSH-------------- 104 (357)
T ss_dssp -------BCSSCGG--GSCCSSSCCC-CCSSSSCBHHHHHHHHHHHHHHTT-CCEECSCCEEEEEE--------------
T ss_pred -------EecCchh--hhhCCCCCCC-CCccCCCCHHHHHHHHHHHHHHcC-CEEEcCCEEEEEEE--------------
Confidence 0000000 0000000000 000112467899999999999887 99999999999987
Q ss_pred cccccccCCeeE-EEeCCCcEEEeeE-EEecCCCch
Q 010225 215 ATTLFTKGHLAK-LDLSDGTSLYAKL-VGADGGKSR 248 (514)
Q Consensus 215 ~~~~~~~~~~~~-v~~~~g~~~~ad~-V~AdG~~S~ 248 (514)
.++.+. |.+.+| ++.+|. |.|+|.+|.
T Consensus 105 ------~~~~~~~v~~~~g-~~~~d~vV~AtG~~~~ 133 (357)
T 4a9w_A 105 ------FGERLRVVARDGR-QWLARAVISATGTWGE 133 (357)
T ss_dssp ------ETTEEEEEETTSC-EEEEEEEEECCCSGGG
T ss_pred ------CCCcEEEEEeCCC-EEEeCEEEECCCCCCC
Confidence 446677 888887 799999 999998774
No 66
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.19 E-value=4.4e-10 Score=117.56 Aligned_cols=64 Identities=16% Similarity=0.281 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCccccccccCCeeEEEeCCCcEEEeeE-EEecCCCchh
Q 010225 171 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKSRV 249 (514)
Q Consensus 171 ~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S~v 249 (514)
..+.+.|.+.+++.| ++|+++++|++|+. +++..+.|++.||+++.||. |.+.+.....
T Consensus 221 ~~l~~aL~~~~~~~G-g~I~~~~~V~~I~~-------------------~~~~~~gV~~~~g~~~~ad~VV~~a~~~~~~ 280 (501)
T 4dgk_A 221 GALVQGMIKLFQDLG-GEVVLNARVSHMET-------------------TGNKIEAVHLEDGRRFLTQAVASNADVVHTY 280 (501)
T ss_dssp HHHHHHHHHHHHHTT-CEEECSCCEEEEEE-------------------ETTEEEEEEETTSCEEECSCEEECCC-----
T ss_pred cchHHHHHHHHHHhC-CceeeecceeEEEe-------------------eCCeEEEEEecCCcEEEcCEEEECCCHHHHH
Confidence 567788889999998 89999999999987 13344558999999999999 8888887777
Q ss_pred hhhhC
Q 010225 250 RELAG 254 (514)
Q Consensus 250 R~~l~ 254 (514)
+..++
T Consensus 281 ~~Ll~ 285 (501)
T 4dgk_A 281 RDLLS 285 (501)
T ss_dssp -----
T ss_pred HHhcc
Confidence 66664
No 67
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.19 E-value=4e-11 Score=118.57 Aligned_cols=124 Identities=23% Similarity=0.232 Sum_probs=89.2
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHh
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQ 132 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~ 132 (514)
++.+||+||||||+|+++|+.|++. |++|+|||+++.++ |.+...
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~----g~~v~lie~~~~~g-----------------------------g~~~~~-- 47 (335)
T 2zbw_A 3 ADHTDVLIVGAGPTGLFAGFYVGMR----GLSFRFVDPLPEPG-----------------------------GQLTAL-- 47 (335)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHT----TCCEEEEESSSSSC-----------------------------HHHHHT--
T ss_pred CCcCcEEEECCCHHHHHHHHHHHhC----CCCEEEEeCCCCCC-----------------------------Ceeecc--
Confidence 3568999999999999999999996 99999999987551 000000
Q ss_pred hhccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCC
Q 010225 133 HRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDST 212 (514)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~ 212 (514)
. +.. .+++... .+ .+.+..+...|.+.+.+.+ ++++++++|+.++.
T Consensus 48 --~-~~~--~~~~~~~-------------~~---~~~~~~~~~~l~~~~~~~~-~~~~~~~~v~~i~~------------ 93 (335)
T 2zbw_A 48 --Y-PEK--YIYDVAG-------------FP---KVYAKDLVKGLVEQVAPFN-PVYSLGERAETLER------------ 93 (335)
T ss_dssp --C-TTS--EECCSTT-------------CS---SEEHHHHHHHHHHHHGGGC-CEEEESCCEEEEEE------------
T ss_pred --C-CCc--eeeccCC-------------CC---CCCHHHHHHHHHHHHHHcC-CEEEeCCEEEEEEE------------
Confidence 0 000 0111000 00 1457788888999888877 89999999999976
Q ss_pred CccccccccCCeeEEEeCCCcEEEeeE-EEecCCCchhhhhh
Q 010225 213 PSATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKSRVRELA 253 (514)
Q Consensus 213 ~~~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S~vR~~l 253 (514)
.++.+.|.+.+|.++.+|. |.|+|.+|...+..
T Consensus 94 --------~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~p~~~ 127 (335)
T 2zbw_A 94 --------EGDLFKVTTSQGNAYTAKAVIIAAGVGAFEPRRI 127 (335)
T ss_dssp --------ETTEEEEEETTSCEEEEEEEEECCTTSEEEECCC
T ss_pred --------CCCEEEEEECCCCEEEeCEEEECCCCCCCCCCCC
Confidence 3346788888888899999 99999987655444
No 68
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.18 E-value=5.8e-11 Score=118.72 Aligned_cols=125 Identities=20% Similarity=0.224 Sum_probs=89.7
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHh
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQ 132 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~ 132 (514)
+..+||+||||||+|+++|+.|++. |++|+|||+.+.++ |.+...
T Consensus 12 ~~~~dvvIIG~G~aGl~aA~~l~~~----g~~v~lie~~~~~g-----------------------------g~~~~~-- 56 (360)
T 3ab1_A 12 HDMRDLTIIGGGPTGIFAAFQCGMN----NISCRIIESMPQLG-----------------------------GQLAAL-- 56 (360)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSSSC-----------------------------HHHHHT--
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhC----CCCEEEEecCCCCC-----------------------------Cccccc--
Confidence 3468999999999999999999996 99999999987551 000000
Q ss_pred hhccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCC
Q 010225 133 HRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDST 212 (514)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~ 212 (514)
. +.. ..++... . ..+.+..+...|.+.+.+.+ ++++++++|+.++.
T Consensus 57 --~-~~~--~~~~~~~----------~------~~~~~~~~~~~l~~~~~~~~-~~~~~~~~v~~i~~------------ 102 (360)
T 3ab1_A 57 --Y-PEK--HIYDVAG----------F------PEVPAIDLVESLWAQAERYN-PDVVLNETVTKYTK------------ 102 (360)
T ss_dssp --C-TTS--EECCSTT----------C------SSEEHHHHHHHHHHHHHTTC-CEEECSCCEEEEEE------------
T ss_pred --C-CCc--ccccCCC----------C------CCCCHHHHHHHHHHHHHHhC-CEEEcCCEEEEEEE------------
Confidence 0 000 0111000 0 01467888999999998877 89999999999986
Q ss_pred CccccccccCCeeEEEeCCCcEEEeeE-EEecCCCchhhhhh
Q 010225 213 PSATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKSRVRELA 253 (514)
Q Consensus 213 ~~~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S~vR~~l 253 (514)
+.+..+.|.+.+|.++.+|. |.|+|..|..++.+
T Consensus 103 -------~~~~~~~v~~~~g~~~~~~~li~AtG~~~~~~~~~ 137 (360)
T 3ab1_A 103 -------LDDGTFETRTNTGNVYRSRAVLIAAGLGAFEPRKL 137 (360)
T ss_dssp -------CTTSCEEEEETTSCEEEEEEEEECCTTCSCCBCCC
T ss_pred -------CCCceEEEEECCCcEEEeeEEEEccCCCcCCCCCC
Confidence 11236788888888899999 99999988665544
No 69
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.18 E-value=5.8e-10 Score=113.94 Aligned_cols=60 Identities=13% Similarity=0.214 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCccccccccCCeeEEEeCCCcEEEeeE-EEecCCCchh
Q 010225 171 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKSRV 249 (514)
Q Consensus 171 ~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S~v 249 (514)
..+.+.|.+.+++.| ++|+++++|++|+. +++.+ | ..+|.++.||. |.|.|.+...
T Consensus 189 ~~l~~~l~~~~~~~G-~~i~~~~~V~~i~~--------------------~~~~v-V-~~~g~~~~ad~Vv~a~~~~~~~ 245 (421)
T 3nrn_A 189 KAVIDELERIIMENK-GKILTRKEVVEINI--------------------EEKKV-Y-TRDNEEYSFDVAISNVGVRETV 245 (421)
T ss_dssp HHHHHHHHHHHHTTT-CEEESSCCEEEEET--------------------TTTEE-E-ETTCCEEECSEEEECSCHHHHH
T ss_pred HHHHHHHHHHHHHCC-CEEEcCCeEEEEEE--------------------ECCEE-E-EeCCcEEEeCEEEECCCHHHHH
Confidence 467778888888887 89999999999986 34556 5 45778899999 9999988654
Q ss_pred hhhhC
Q 010225 250 RELAG 254 (514)
Q Consensus 250 R~~l~ 254 (514)
+.++
T Consensus 246 -~ll~ 249 (421)
T 3nrn_A 246 -KLIG 249 (421)
T ss_dssp -HHHC
T ss_pred -HhcC
Confidence 4554
No 70
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.18 E-value=3e-11 Score=128.46 Aligned_cols=64 Identities=13% Similarity=0.004 Sum_probs=49.0
Q ss_pred ehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCcccccccc-CCeeEEEe--CCCc--EEEeeE-EEe
Q 010225 169 ENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTK-GHLAKLDL--SDGT--SLYAKL-VGA 242 (514)
Q Consensus 169 ~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~--~~g~--~~~ad~-V~A 242 (514)
....+.+.|.+.+++.+ ++|+++++|+++..+ + +..+.|.. .+|+ ++.||. |.|
T Consensus 253 ~g~~l~~~L~~~~~~~g-v~i~~~~~v~~l~~~-------------------~~g~v~Gv~~~~~~g~~~~i~a~~VVlA 312 (571)
T 1y0p_A 253 VGAHVVQVLYDNAVKRN-IDLRMNTRGIEVLKD-------------------DKGTVKGILVKGMYKGYYWVKADAVILA 312 (571)
T ss_dssp HHHHHHHHHHHHHHHTT-CEEESSEEEEEEEEC-------------------TTSCEEEEEEEETTTEEEEEECSEEEEC
T ss_pred CHHHHHHHHHHHHHhcC-CEEEeCCEeeEeEEc-------------------CCCeEEEEEEEeCCCcEEEEECCeEEEe
Confidence 35789999999999887 999999999999861 1 23333433 3675 689999 999
Q ss_pred cCCCchhhhh
Q 010225 243 DGGKSRVREL 252 (514)
Q Consensus 243 dG~~S~vR~~ 252 (514)
+|.+|..+++
T Consensus 313 tGg~~~n~~~ 322 (571)
T 1y0p_A 313 TGGFAKNNER 322 (571)
T ss_dssp CCCCTTCHHH
T ss_pred CCCcccCHHH
Confidence 9999976543
No 71
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.17 E-value=8e-11 Score=123.85 Aligned_cols=157 Identities=15% Similarity=0.177 Sum_probs=99.4
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC-CCCCCCCCCCCCCCCCceEEeC-hhhHHHHHHcC-CcHHH
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP-ALGKSNFIKKEDPPDPRVSTVT-PATISFFKEIG-AWQYV 130 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~-~~~~~~~~~~~~~~~~~~~~l~-~~~~~~l~~lg-l~~~~ 130 (514)
..+||+|||||++|+++|+.|++. |.+|+|||++. ..+..+|. +...++. ....+.++.+| .+..+
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~----G~kVlLIEk~~~~iG~~~Cn-------ps~GGia~g~lv~eldalgg~~~~~ 94 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARM----GAKTAMFVLNADTIGQMSCN-------PAIGGIAKGIVVREIDALGGEMGKA 94 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHT----TCCEEEEESCGGGTTCCCSC-------SEEECTTHHHHHHHHHHHTCSHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC----CCCEEEEEecccccCCcCcc-------ccccccchHHHHHHHHHhhhHHHHH
Confidence 469999999999999999999997 99999999985 34333331 1111111 12233344443 33322
Q ss_pred HhhhccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccC
Q 010225 131 QQHRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVD 210 (514)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~ 210 (514)
..... -.+...+.... . ........+++..+...|.+.+++..+++| ++.+|+++..
T Consensus 95 ~d~~g---i~f~~l~~~kG-p--------av~~~r~~~Dr~~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~---------- 151 (637)
T 2zxi_A 95 IDQTG---IQFKMLNTRKG-K--------AVQSPRAQADKKRYREYMKKVCENQENLYI-KQEEVVDIIV---------- 151 (637)
T ss_dssp HHHHE---EEEEEESTTSC-G--------GGCEEEEEECHHHHHHHHHHHHHTCTTEEE-EESCEEEEEE----------
T ss_pred hhhcc---cceeecccccC-c--------cccchhhhCCHHHHHHHHHHHHHhCCCCEE-EEeEEEEEEe----------
Confidence 22111 01111111100 0 011123467899999999999988545998 5679999976
Q ss_pred CCCccccccccCCeeEEEeCCCcEEEeeE-EEecCCCchhhhhh
Q 010225 211 STPSATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKSRVRELA 253 (514)
Q Consensus 211 ~~~~~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S~vR~~l 253 (514)
+++....|.+.+|.++.||. |.|+|.++..+...
T Consensus 152 ---------e~g~V~GV~t~dG~~i~AdaVVLATG~~s~~~~~~ 186 (637)
T 2zxi_A 152 ---------KNNQVVGVRTNLGVEYKTKAVVVTTGTFLNGVIYI 186 (637)
T ss_dssp ---------SSSBEEEEEETTSCEEECSEEEECCTTCBTCEEEE
T ss_pred ---------cCCEEEEEEECCCcEEEeCEEEEccCCCccCceec
Confidence 12234468888998999999 99999998776543
No 72
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.16 E-value=2e-10 Score=121.19 Aligned_cols=154 Identities=16% Similarity=0.144 Sum_probs=95.6
Q ss_pred CCCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC-CCCCCCCCCCCCCCCCceEEeChhhHHHHHH---cC-C
Q 010225 52 NDDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP-ALGKSNFIKKEDPPDPRVSTVTPATISFFKE---IG-A 126 (514)
Q Consensus 52 ~~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~---lg-l 126 (514)
....+||+|||||++|+++|+.|++. |.+|+|||+.. .++..+|. +...++ ....+++. ++ +
T Consensus 18 ~~~~yDVIVIGgG~AGl~AAlaLAr~----G~kVlLIEk~~~~iG~~~c~-------ps~gGi--a~~~lv~el~al~g~ 84 (641)
T 3cp8_A 18 GSHMYDVIVVGAGHAGCEAALAVARG----GLHCLLITSDLSAVARMSCN-------PAIGGV--AKGQITREIDALGGE 84 (641)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHT----TCCEEEEESCGGGTTCCSSC-------SEEECH--HHHHHHHHHHHHTCS
T ss_pred ccCcCCEEEECccHHHHHHHHHHHHC----CCcEEEEEecccccCCCccc-------cchhhh--hHHHHHHHHHhcccH
Confidence 34569999999999999999999996 99999999985 34333321 111111 12233333 22 2
Q ss_pred cHHHHhhhccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCC
Q 010225 127 WQYVQQHRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSS 206 (514)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~ 206 (514)
......... ..+...+.... . ........+++..+...|.+.+++.++++|+. .+|+++..
T Consensus 85 ~~~~~d~~g---i~f~~l~~~kg--------p-av~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~-~~V~~L~~------ 145 (641)
T 3cp8_A 85 MGKAIDATG---IQFRMLNRSKG--------P-AMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQ-DTVIGVSA------ 145 (641)
T ss_dssp HHHHHHHHE---EEEEEECSSSC--------T-TTCEEEEEECHHHHHHHHHHHHHTCTTEEEEE-CCEEEEEE------
T ss_pred HHHHHHhcC---CchhhcccccC--------c-cccchhhhcCHHHHHHHHHHHHHhCCCCEEEe-eEEEEEEe------
Confidence 221111111 01111111100 0 01122356899999999999998865599865 58999876
Q ss_pred cccCCCCccccccccCCeeE-EEeCCCcEEEeeE-EEecCCCchhhh
Q 010225 207 ISVDSTPSATTLFTKGHLAK-LDLSDGTSLYAKL-VGADGGKSRVRE 251 (514)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~-v~~~~g~~~~ad~-V~AdG~~S~vR~ 251 (514)
+++.+. |.+.+|.++.||. |.|+|.++..+-
T Consensus 146 --------------d~g~V~GV~t~~G~~i~Ad~VVLATG~~s~~~i 178 (641)
T 3cp8_A 146 --------------NSGKFSSVTVRSGRAIQAKAAILACGTFLNGLI 178 (641)
T ss_dssp --------------ETTEEEEEEETTSCEEEEEEEEECCTTCBTCEE
T ss_pred --------------cCCEEEEEEECCCcEEEeCEEEECcCCCCCccc
Confidence 334444 8888898999999 999999987543
No 73
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=99.12 E-value=5.7e-10 Score=111.07 Aligned_cols=51 Identities=16% Similarity=0.080 Sum_probs=42.1
Q ss_pred EEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCccccccccCCeeEEEeCCCcEEEeeE-EEec
Q 010225 165 GCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKL-VGAD 243 (514)
Q Consensus 165 ~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~ad~-V~Ad 243 (514)
+..++...+...|.+.+++.| ++|+. ++|++++. .+ .+.||. |.|+
T Consensus 136 ~~~v~p~~~~~~l~~~~~~~G-v~i~~-~~V~~i~~--------------------~~-----------~~~a~~VV~A~ 182 (351)
T 3g3e_A 136 SLILEGKNYLQWLTERLTERG-VKFFQ-RKVESFEE--------------------VA-----------REGADVIVNCT 182 (351)
T ss_dssp EEEECHHHHHHHHHHHHHHTT-CEEEE-CCCCCHHH--------------------HH-----------HTTCSEEEECC
T ss_pred ceEEcHHHHHHHHHHHHHHCC-CEEEE-EEeCCHHH--------------------hh-----------cCCCCEEEECC
Confidence 467899999999999999987 99988 88988854 11 156999 9999
Q ss_pred CCCch
Q 010225 244 GGKSR 248 (514)
Q Consensus 244 G~~S~ 248 (514)
|.+|.
T Consensus 183 G~~s~ 187 (351)
T 3g3e_A 183 GVWAG 187 (351)
T ss_dssp GGGGG
T ss_pred CcChH
Confidence 99985
No 74
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.12 E-value=2.4e-10 Score=117.78 Aligned_cols=165 Identities=10% Similarity=0.026 Sum_probs=89.7
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCc--EEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHH-
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHL--SVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQY- 129 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~--~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~- 129 (514)
.+.+||+||||||+|+++|+.|++. |+ +|+|||+.+.++....+... . .....+...... +..-.+...
T Consensus 4 ~~~~dV~IIGaG~aGl~aA~~L~~~----G~~~~V~v~E~~~~~GG~~~~~~~-~--~~~~~ip~~~~~-~~~~~~~~g~ 75 (447)
T 2gv8_A 4 PTIRKIAIIGAGPSGLVTAKALLAE----KAFDQVTLFERRGSPGGVWNYTST-L--SNKLPVPSTNPI-LTTEPIVGPA 75 (447)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHTT----TCCSEEEEECSSSSSSTTCSCCSC-C--CSCCCSSBCCTT-CCCCCBCCSS
T ss_pred CCCCEEEEECccHHHHHHHHHHHhc----CCCCCeEEEecCCCCCCeecCCCC-C--Cccccccccccc-cccccccccc
Confidence 4568999999999999999999996 88 99999998766422111100 0 000000000000 000000000
Q ss_pred -HHhhhccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcc
Q 010225 130 -VQQHRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSIS 208 (514)
Q Consensus 130 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~ 208 (514)
........+..+. .........+........ ....+++..+.++|.+.+++.+ ..++++++|++++.
T Consensus 76 ~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~~~~-~~i~~~t~V~~v~~-------- 143 (447)
T 2gv8_A 76 ALPVYPSPLYRDLQ--TNTPIELMGYCDQSFKPQ-TLQFPHRHTIQEYQRIYAQPLL-PFIKLATDVLDIEK-------- 143 (447)
T ss_dssp SCCBCCCCCCTTCB--CSSCHHHHSCTTCCCCTT-CCSSCBHHHHHHHHHHHHGGGG-GGEECSEEEEEEEE--------
T ss_pred ccCCccCchhhhhc--cCCCHHHhccCCCCCCCC-CCCCCCHHHHHHHHHHHHHHhh-CeEEeCCEEEEEEe--------
Confidence 0000000000000 000000000000000000 1123578899999999998875 78999999999976
Q ss_pred cCCCCccccccccCCeeEEEeCC---Cc---EEEeeE-EEecCCCchh
Q 010225 209 VDSTPSATTLFTKGHLAKLDLSD---GT---SLYAKL-VGADGGKSRV 249 (514)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~v~~~~---g~---~~~ad~-V~AdG~~S~v 249 (514)
.++.+.|++.+ |. ++.+|. |.|+|.+|.-
T Consensus 144 ------------~~~~~~V~~~~~~~G~~~~~~~~d~VVvAtG~~s~p 179 (447)
T 2gv8_A 144 ------------KDGSWVVTYKGTKAGSPISKDIFDAVSICNGHYEVP 179 (447)
T ss_dssp ------------ETTEEEEEEEESSTTCCEEEEEESEEEECCCSSSSB
T ss_pred ------------CCCeEEEEEeecCCCCeeEEEEeCEEEECCCCCCCC
Confidence 34557777655 66 799999 9999998753
No 75
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.11 E-value=5.5e-10 Score=114.45 Aligned_cols=36 Identities=36% Similarity=0.646 Sum_probs=33.5
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALG 95 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~ 95 (514)
+||+|||||++|+++|+.|++. |++|+|||+++.++
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~----G~~V~vlE~~~~~G 37 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNA----GKKVLLLEGGERLG 37 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT----TCCEEEECSSSSSB
T ss_pred CCEEEECCcHHHHHHHHHHHHc----CCeEEEEecCCCcc
Confidence 7999999999999999999997 99999999987664
No 76
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.07 E-value=4.5e-10 Score=119.13 Aligned_cols=69 Identities=12% Similarity=0.074 Sum_probs=51.1
Q ss_pred EEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCccccccccCCeeEEEeC---CCc--EEEeeE-E
Q 010225 167 VVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLS---DGT--SLYAKL-V 240 (514)
Q Consensus 167 ~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~---~g~--~~~ad~-V 240 (514)
.++...+...|.+.+.+.| ++|+++++|++++. +.+..+.|.+. +|. ++.||. |
T Consensus 184 ~v~~~~l~~~l~~~a~~~G-a~i~~~t~V~~l~~-------------------~~~~v~gV~~~d~~tg~~~~i~A~~VV 243 (571)
T 2rgh_A 184 RNNDARLVIDNIKKAAEDG-AYLVSKMKAVGFLY-------------------EGDQIVGVKARDLLTDEVIEIKAKLVI 243 (571)
T ss_dssp ECCHHHHHHHHHHHHHHTT-CEEESSEEEEEEEE-------------------ETTEEEEEEEEETTTCCEEEEEBSCEE
T ss_pred eEchHHHHHHHHHHHHHcC-CeEEeccEEEEEEE-------------------eCCEEEEEEEEEcCCCCEEEEEcCEEE
Confidence 3567888888999999888 99999999999987 12233345542 343 699999 9
Q ss_pred EecCCCch-hhhhhCC
Q 010225 241 GADGGKSR-VRELAGF 255 (514)
Q Consensus 241 ~AdG~~S~-vR~~l~~ 255 (514)
.|+|.+|. +++..+.
T Consensus 244 ~AaG~ws~~l~~~~g~ 259 (571)
T 2rgh_A 244 NTSGPWVDKVRNLNFT 259 (571)
T ss_dssp ECCGGGHHHHHTTCCS
T ss_pred ECCChhHHHHHHhhcc
Confidence 99999984 5555543
No 77
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.06 E-value=6.4e-10 Score=117.01 Aligned_cols=139 Identities=17% Similarity=0.159 Sum_probs=90.5
Q ss_pred CCccEEEECCCHHHHHHHHHhc-cCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHh
Q 010225 54 DQYDVAVVGGGMVGMALACSLA-SMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQ 132 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~-~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~ 132 (514)
..+||+|||||++|+++|+.|+ +. |++|+|||+++..+.. |... ...+....+..... .+...+.+..
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~----G~~v~viE~~~~~GGt-w~~~--~ypg~~~d~~s~~~----~~~~~~~~~~ 75 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHEL----GLTTVGFDKADGPGGT-WYWN--RYPGALSDTESHLY----RFSFDRDLLQ 75 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTT----CCCEEEEESSSSSCTH-HHHC--CCTTCEEEEEGGGS----SCCSCHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcC----CCCEEEEECCCCCCCc-cccc--CCCCceecCCccee----eecccccccc
Confidence 4689999999999999999999 75 9999999998866311 1000 00000000000000 0000000000
Q ss_pred hhccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCc--eEEcCCeeEEEeeCCCCCCcccC
Q 010225 133 HRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQ--KTIYPSRLTSMALLPSSSSISVD 210 (514)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v--~v~~~~~v~~v~~~~~~~~~~~~ 210 (514)
. ........++..+..+|.+.+++.+ + +++++++|++++..
T Consensus 76 -------------------------~--~~~~~~~~~~~ei~~~l~~~~~~~g-~~~~i~~~~~V~~i~~~--------- 118 (540)
T 3gwf_A 76 -------------------------E--STWKTTYITQPEILEYLEDVVDRFD-LRRHFKFGTEVTSALYL--------- 118 (540)
T ss_dssp -------------------------H--CCCSBSEEEHHHHHHHHHHHHHHTT-CGGGEEESCCEEEEEEE---------
T ss_pred -------------------------C--CCCcccCCCHHHHHHHHHHHHHHcC-CcceeEeccEEEEEEEe---------
Confidence 0 0001124678999999999999887 6 89999999999871
Q ss_pred CCCccccccccCCeeEEEeCCCcEEEeeE-EEecCCCchh
Q 010225 211 STPSATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKSRV 249 (514)
Q Consensus 211 ~~~~~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S~v 249 (514)
+++..+.|.+.+|+++.||. |.|+|..|.-
T Consensus 119 ---------~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p 149 (540)
T 3gwf_A 119 ---------DDENLWEVTTDHGEVYRAKYVVNAVGLLSAI 149 (540)
T ss_dssp ---------TTTTEEEEEETTSCEEEEEEEEECCCSCCSB
T ss_pred ---------CCCCEEEEEEcCCCEEEeCEEEECCcccccC
Confidence 12357899999999999999 9999987754
No 78
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.06 E-value=6.3e-10 Score=108.64 Aligned_cols=114 Identities=18% Similarity=0.218 Sum_probs=82.6
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCc-EEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhhh
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~-~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (514)
+||+||||||+|+++|+.|++. |+ +|+|||++. ++. .| . .. .
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~----g~~~v~lie~~~-~gg-~~-------------~--~~-------~--------- 44 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRG----GVKNAVLFEKGM-PGG-QI-------------T--GS-------S--------- 44 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT----TCSSEEEECSSS-TTC-GG-------------G--GC-------S---------
T ss_pred ceEEEECccHHHHHHHHHHHHC----CCCcEEEEcCCC-CCc-cc-------------c--cc-------c---------
Confidence 7999999999999999999996 99 999999963 210 00 0 00 0
Q ss_pred ccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCc
Q 010225 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (514)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~ 214 (514)
... .++ .. ...+++..+...|.+.+.+.+ +++++ .+|++++.
T Consensus 45 --~~~-------------~~~--~~-----~~~~~~~~~~~~l~~~~~~~~-v~~~~-~~v~~i~~-------------- 86 (311)
T 2q0l_A 45 --EIE-------------NYP--GV-----KEVVSGLDFMQPWQEQCFRFG-LKHEM-TAVQRVSK-------------- 86 (311)
T ss_dssp --CBC-------------CST--TC-----CSCBCHHHHHHHHHHHHHTTS-CEEEC-SCEEEEEE--------------
T ss_pred --ccc-------------cCC--CC-----cccCCHHHHHHHHHHHHHHcC-CEEEE-EEEEEEEE--------------
Confidence 000 000 00 012567889999999898887 89988 68999976
Q ss_pred cccccccCCeeEEEeCCCcEEEeeE-EEecCCCchhh
Q 010225 215 ATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKSRVR 250 (514)
Q Consensus 215 ~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S~vR 250 (514)
.++.+.|.+.+|.++.+|. |.|+|.++.+.
T Consensus 87 ------~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~~ 117 (311)
T 2q0l_A 87 ------KDSHFVILAEDGKTFEAKSVIIATGGSPKRT 117 (311)
T ss_dssp ------ETTEEEEEETTSCEEEEEEEEECCCEEECCC
T ss_pred ------cCCEEEEEEcCCCEEECCEEEECCCCCCCCC
Confidence 3456778788888999999 99999877553
No 79
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.05 E-value=1.6e-09 Score=106.15 Aligned_cols=112 Identities=19% Similarity=0.178 Sum_probs=82.5
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhh
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQH 133 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~ 133 (514)
+.+||+|||||++|+++|+.|++. |++|+|||++ ++.. | ..
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~~----g~~v~lie~~--~gg~-~--------------~~------------------ 54 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSARY----MLKTLVIGET--PGGQ-L--------------TE------------------ 54 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT----TCCEEEEESS--TTGG-G--------------GG------------------
T ss_pred CccCEEEECccHHHHHHHHHHHHC----CCcEEEEecc--CCCe-e--------------cc------------------
Confidence 468999999999999999999996 9999999998 3100 0 00
Q ss_pred hccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCC
Q 010225 134 RHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTP 213 (514)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~ 213 (514)
. . ..+. + .... .+....+...|.+.+++.+ +++++ .+|++++.
T Consensus 55 -~-~----~~~~--------~-----~~~~---~~~~~~~~~~~~~~~~~~~-v~~~~-~~v~~i~~------------- 97 (323)
T 3f8d_A 55 -A-G----IVDD--------Y-----LGLI---EIQASDMIKVFNKHIEKYE-VPVLL-DIVEKIEN------------- 97 (323)
T ss_dssp -C-C----EECC--------S-----TTST---TEEHHHHHHHHHHHHHTTT-CCEEE-SCEEEEEE-------------
T ss_pred -c-c----cccc--------c-----CCCC---CCCHHHHHHHHHHHHHHcC-CEEEE-EEEEEEEe-------------
Confidence 0 0 0000 0 0000 1467889999999998887 89999 89999987
Q ss_pred ccccccccCCeeEEEeCCCcEEEeeE-EEecCCCch
Q 010225 214 SATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKSR 248 (514)
Q Consensus 214 ~~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S~ 248 (514)
.++.+.+...+|.++.+|. |.|+|....
T Consensus 98 -------~~~~~~v~~~~g~~~~~d~lvlAtG~~~~ 126 (323)
T 3f8d_A 98 -------RGDEFVVKTKRKGEFKADSVILGIGVKRR 126 (323)
T ss_dssp -------C--CEEEEESSSCEEEEEEEEECCCCEEC
T ss_pred -------cCCEEEEEECCCCEEEcCEEEECcCCCCc
Confidence 4456788888888999999 999998743
No 80
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.04 E-value=6.6e-10 Score=107.50 Aligned_cols=112 Identities=13% Similarity=0.113 Sum_probs=82.7
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhhh
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (514)
.+||+||||||+|+++|+.|++. |++|+|||+.+..... . .
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~----g~~v~lie~~~~~~~~----------------~-----------------~-- 42 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRA----RKNILLVDAGERRNRF----------------A-----------------S-- 42 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT----TCCEEEEECCCCGGGG----------------C-----------------S--
T ss_pred CCCEEEECCCHHHHHHHHHHHhC----CCCEEEEeCCCccccc----------------c-----------------h--
Confidence 48999999999999999999996 8999999987632100 0 0
Q ss_pred ccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCc
Q 010225 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (514)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~ 214 (514)
.. . .+.. . ...+...+...+.+.+.+.++++++.+ +|++++.
T Consensus 43 --~~--------~-----~~~~----~----~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~i~~-------------- 84 (297)
T 3fbs_A 43 --HS--------H-----GFLG----Q----DGKAPGEIIAEARRQIERYPTIHWVEG-RVTDAKG-------------- 84 (297)
T ss_dssp --CC--------C-----SSTT----C----TTCCHHHHHHHHHHHHTTCTTEEEEES-CEEEEEE--------------
T ss_pred --hh--------c-----CCcC----C----CCCCHHHHHHHHHHHHHhcCCeEEEEe-EEEEEEE--------------
Confidence 00 0 0000 0 013467888999999988755777655 8999986
Q ss_pred cccccccCCeeEEEeCCCcEEEeeE-EEecCCCchh
Q 010225 215 ATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKSRV 249 (514)
Q Consensus 215 ~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S~v 249 (514)
.++.+.|.+.+|.++.+|. |.|+|..+..
T Consensus 85 ------~~~~~~v~~~~g~~~~~d~vviAtG~~~~~ 114 (297)
T 3fbs_A 85 ------SFGEFIVEIDGGRRETAGRLILAMGVTDEL 114 (297)
T ss_dssp ------ETTEEEEEETTSCEEEEEEEEECCCCEEEC
T ss_pred ------cCCeEEEEECCCCEEEcCEEEECCCCCCCC
Confidence 4456889999998999999 9999997654
No 81
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.03 E-value=4.8e-10 Score=110.61 Aligned_cols=123 Identities=13% Similarity=0.104 Sum_probs=83.9
Q ss_pred CCCCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHH
Q 010225 51 NNDDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYV 130 (514)
Q Consensus 51 ~~~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~ 130 (514)
...+.+||+|||||++|+++|+.|++. |++|+|||+.+... ....+ .+.
T Consensus 18 ~~~~~~~vvIIG~G~aGl~aA~~l~~~----g~~v~vie~~~~~~----------~~~gg---------------~~~-- 66 (338)
T 3itj_A 18 GSHVHNKVTIIGSGPAAHTAAIYLARA----EIKPILYEGMMANG----------IAAGG---------------QLT-- 66 (338)
T ss_dssp ---CEEEEEEECCSHHHHHHHHHHHHT----TCCCEEECCSSBTT----------BCTTC---------------GGG--
T ss_pred CCCCCCCEEEECcCHHHHHHHHHHHHC----CCCEEEEecCCCCC----------CCcCc---------------ccc--
Confidence 345678999999999999999999996 99999999976210 00000 000
Q ss_pred HhhhccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccC
Q 010225 131 QQHRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVD 210 (514)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~ 210 (514)
. .. .+.. + ...+ ..+.+..+...|.+.+.+.+ +++++++ |++++.
T Consensus 67 -~-----~~--~~~~--------~-----~~~~--~~~~~~~~~~~~~~~~~~~g-v~i~~~~-v~~i~~---------- 111 (338)
T 3itj_A 67 -T-----TT--EIEN--------F-----PGFP--DGLTGSELMDRMREQSTKFG-TEIITET-VSKVDL---------- 111 (338)
T ss_dssp -G-----SS--EECC--------S-----TTCT--TCEEHHHHHHHHHHHHHHTT-CEEECSC-EEEEEC----------
T ss_pred -c-----ch--hhcc--------c-----CCCc--ccCCHHHHHHHHHHHHHHcC-CEEEEeE-EEEEEE----------
Confidence 0 00 0000 0 0000 12567889999999999887 9999997 999976
Q ss_pred CCCccccccccCCeeEEEe---CCCcEEEeeE-EEecCCCchh
Q 010225 211 STPSATTLFTKGHLAKLDL---SDGTSLYAKL-VGADGGKSRV 249 (514)
Q Consensus 211 ~~~~~~~~~~~~~~~~v~~---~~g~~~~ad~-V~AdG~~S~v 249 (514)
..+.+.+.. .++.++.+|. |.|+|..+..
T Consensus 112 ----------~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~~~ 144 (338)
T 3itj_A 112 ----------SSKPFKLWTEFNEDAEPVTTDAIILATGASAKR 144 (338)
T ss_dssp ----------SSSSEEEEETTCSSSCCEEEEEEEECCCEEECC
T ss_pred ----------cCCEEEEEEEecCCCcEEEeCEEEECcCCCcCC
Confidence 445677776 3667899999 9999986543
No 82
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.02 E-value=1.8e-09 Score=113.10 Aligned_cols=40 Identities=28% Similarity=0.414 Sum_probs=36.3
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCC
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGK 96 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~ 96 (514)
+.++||||||||++||++|+.|++. |.+|+||||.+..+.
T Consensus 39 ~~~~DVvVVGaG~AGl~AA~~aa~~----G~~V~vlEk~~~~GG 78 (510)
T 4at0_A 39 DYEADVVVAGYGIAGVAASIEAARA----GADVLVLERTSGWGG 78 (510)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSSSCT
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHC----CCcEEEEeCCCCCCC
Confidence 4579999999999999999999996 999999999987753
No 83
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.02 E-value=1.2e-09 Score=115.23 Aligned_cols=142 Identities=16% Similarity=0.149 Sum_probs=88.9
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHh
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQ 132 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~ 132 (514)
+..+||+|||||++|+++|+.|++. |++|+|||+++.++.. |.... .+ +..+.... .+-.+....++..
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~~----G~~v~iiE~~~~~GG~-w~~~~-~p---g~~~d~~~--~~~~~~f~~~~~~ 82 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLREL----GRSVHVIETAGDVGGV-WYWNR-YP---GARCDIES--IEYCYSFSEEVLQ 82 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSSSCTH-HHHCC-CT---TCBCSSCT--TTSSCCSCHHHHH
T ss_pred CCCCCEEEECccHHHHHHHHHHHhC----CCCEEEEeCCCCCCCc-ccccC-CC---ceeecccc--cccccccChhhhh
Confidence 3468999999999999999999996 9999999999876311 10000 00 00000000 0000000000000
Q ss_pred hhccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCC-CceEEcCCeeEEEeeCCCCCCcccCC
Q 010225 133 HRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTE-FQKTIYPSRLTSMALLPSSSSISVDS 211 (514)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g-~v~v~~~~~v~~v~~~~~~~~~~~~~ 211 (514)
...+ .....++..+.++|.+.+++.+ +++++++++|++++..
T Consensus 83 ------------------~~~~---------~~~~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~---------- 125 (542)
T 1w4x_A 83 ------------------EWNW---------TERYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFD---------- 125 (542)
T ss_dssp ------------------HCCC---------CBSSCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEE----------
T ss_pred ------------------ccCc---------ccccCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEc----------
Confidence 0000 0012467888888888877764 3679999999999871
Q ss_pred CCccccccccCCeeEEEeCCCcEEEeeE-EEecCCCchhh
Q 010225 212 TPSATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKSRVR 250 (514)
Q Consensus 212 ~~~~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S~vR 250 (514)
++...+.|++.+|++++||+ |.|+|.+|.-+
T Consensus 126 --------~~~~~w~V~~~~G~~~~ad~vV~AtG~~s~p~ 157 (542)
T 1w4x_A 126 --------EATNTWTVDTNHGDRIRARYLIMASGQLSVPQ 157 (542)
T ss_dssp --------TTTTEEEEEETTCCEEEEEEEEECCCSCCCCC
T ss_pred --------CCCCeEEEEECCCCEEEeCEEEECcCCCCCCC
Confidence 12356889999998999999 99999987543
No 84
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.02 E-value=1.2e-09 Score=106.41 Aligned_cols=114 Identities=18% Similarity=0.160 Sum_probs=75.3
Q ss_pred CCCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHH
Q 010225 52 NDDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQ 131 (514)
Q Consensus 52 ~~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~ 131 (514)
.++.|||+||||||+|+++|+.|+|. |++|+|||++... + .+.
T Consensus 3 ~M~~yDVvIIGaGpAGlsAA~~lar~----g~~v~lie~~~~g---------------g-~~~----------------- 45 (304)
T 4fk1_A 3 AMKYIDCAVIGAGPAGLNASLVLGRA----RKQIALFDNNTNR---------------N-RVT----------------- 45 (304)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHT----TCCEEEEECSCCG---------------G-GGS-----------------
T ss_pred CCCCcCEEEECCCHHHHHHHHHHHHC----CCCEEEEeCCCCC---------------C-eee-----------------
Confidence 45679999999999999999999996 9999999987522 1 000
Q ss_pred hhhccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCC
Q 010225 132 QHRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDS 211 (514)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~ 211 (514)
. .+.. +.. .. .+....+.....+.+.+.+.+.++.+ .++.+..
T Consensus 46 ~----~~~~-------------~~~----~~----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----------- 88 (304)
T 4fk1_A 46 Q----NSHG-------------FIT----RD----GIKPEEFKEIGLNEVMKYPSVHYYEK-TVVMITK----------- 88 (304)
T ss_dssp S----CBCC-------------STT----CT----TBCHHHHHHHHHHHHTTSTTEEEEEC-CEEEEEE-----------
T ss_pred e----ecCC-------------ccC----CC----CCCHHHHHHHHHHHHHhcCCEEEEee-EEEEeee-----------
Confidence 0 0000 000 00 02345666777777777765655554 5666654
Q ss_pred CCccccccccCCeeEEEeCCCcEEEeeE-EEecCCCc
Q 010225 212 TPSATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKS 247 (514)
Q Consensus 212 ~~~~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S 247 (514)
...+..++...+|+++.+|. |.|+|...
T Consensus 89 --------~~~~~~~v~~~~g~~~~a~~liiATGs~p 117 (304)
T 4fk1_A 89 --------QSTGLFEIVTKDHTKYLAERVLLATGMQE 117 (304)
T ss_dssp --------CTTSCEEEEETTCCEEEEEEEEECCCCEE
T ss_pred --------cCCCcEEEEECCCCEEEeCEEEEccCCcc
Confidence 13355778888999999999 99999753
No 85
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.01 E-value=3.5e-10 Score=111.64 Aligned_cols=119 Identities=14% Similarity=0.084 Sum_probs=81.3
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhh
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQH 133 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~ 133 (514)
..+||+||||||+|+++|+.|++. |++|+|||+..... ....+. +. .
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~----g~~v~lie~~~~~~----------~~~gg~-~~-----------------~- 53 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARA----ELKPLLFEGWMAND----------IAPGGQ-LT-----------------T- 53 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT----TCCCEEECCSSBTT----------BCTTCG-GG-----------------G-
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC----CCeEEEEeccCccc----------cCCCce-ee-----------------e-
Confidence 458999999999999999999996 99999999821110 000000 00 0
Q ss_pred hccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCC
Q 010225 134 RHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTP 213 (514)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~ 213 (514)
...+ ... ...+ ..+.+..+...|.+.+.+.+ +++++++ |++++.
T Consensus 54 ----~~~~--~~~-------------~~~~--~~~~~~~~~~~l~~~~~~~g-v~~~~~~-v~~i~~------------- 97 (333)
T 1vdc_A 54 ----TTDV--ENF-------------PGFP--EGILGVELTDKFRKQSERFG-TTIFTET-VTKVDF------------- 97 (333)
T ss_dssp ----CSEE--CCS-------------TTCT--TCEEHHHHHHHHHHHHHHTT-CEEECCC-CCEEEC-------------
T ss_pred ----cccc--ccC-------------CCCc--cCCCHHHHHHHHHHHHHHCC-CEEEEeE-EEEEEE-------------
Confidence 0000 000 0000 12467888999999888887 9999986 888875
Q ss_pred ccccccccCCeeEEEeCCCcEEEeeE-EEecCCCchh
Q 010225 214 SATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKSRV 249 (514)
Q Consensus 214 ~~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S~v 249 (514)
.++.+.|.+ +|.++.+|. |.|+|.++..
T Consensus 98 -------~~~~~~v~~-~~~~~~~~~vv~A~G~~~~~ 126 (333)
T 1vdc_A 98 -------SSKPFKLFT-DSKAILADAVILAIGAVAKR 126 (333)
T ss_dssp -------SSSSEEEEC-SSEEEEEEEEEECCCEEECC
T ss_pred -------cCCEEEEEE-CCcEEEcCEEEECCCCCcCC
Confidence 335577777 778899999 9999998654
No 86
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.01 E-value=8.6e-10 Score=122.41 Aligned_cols=69 Identities=13% Similarity=0.128 Sum_probs=55.1
Q ss_pred EEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCccccccccCCe-eEEEeCCCcEEEeeE-EEec
Q 010225 166 CVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHL-AKLDLSDGTSLYAKL-VGAD 243 (514)
Q Consensus 166 ~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~g~~~~ad~-V~Ad 243 (514)
..++...+...|.+.+++.| ++|+++++|++++. .++. +.|.+.+| ++.||. |.|+
T Consensus 146 g~v~p~~l~~~L~~~a~~~G-v~i~~~t~V~~i~~--------------------~~~~v~~V~t~~G-~i~Ad~VV~Aa 203 (830)
T 1pj5_A 146 GLASAARAVQLLIKRTESAG-VTYRGSTTVTGIEQ--------------------SGGRVTGVQTADG-VIPADIVVSCA 203 (830)
T ss_dssp EEECHHHHHHHHHHHHHHTT-CEEECSCCEEEEEE--------------------ETTEEEEEEETTE-EEECSEEEECC
T ss_pred ceEcHHHHHHHHHHHHHHcC-CEEECCceEEEEEE--------------------eCCEEEEEEECCc-EEECCEEEECC
Confidence 45688999999999999988 99999999999986 2333 45777777 699999 9999
Q ss_pred CCCchh-hhhhCCC
Q 010225 244 GGKSRV-RELAGFK 256 (514)
Q Consensus 244 G~~S~v-R~~l~~~ 256 (514)
|.+|.. .+.++..
T Consensus 204 G~~s~~l~~~~g~~ 217 (830)
T 1pj5_A 204 GFWGAKIGAMIGMA 217 (830)
T ss_dssp GGGHHHHHHTTTCC
T ss_pred ccchHHHHHHhCCC
Confidence 999864 3444543
No 87
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.00 E-value=9.4e-10 Score=108.19 Aligned_cols=115 Identities=17% Similarity=0.211 Sum_probs=80.7
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHh
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQ 132 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~ 132 (514)
...+||+||||||+|+++|+.|++. |++|+|||+.. ++. .| ... +
T Consensus 6 ~~~~dvvIIG~G~aGl~aA~~l~~~----g~~v~lie~~~-~gg-~~--------------~~~--------~------- 50 (325)
T 2q7v_A 6 AHDYDVVIIGGGPAGLTAAIYTGRA----QLSTLILEKGM-PGG-QI--------------AWS--------E------- 50 (325)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHT----TCCEEEEESSC-TTG-GG--------------GGC--------S-------
T ss_pred cccCCEEEECCCHHHHHHHHHHHHc----CCcEEEEeCCC-CCc-cc--------------ccc--------c-------
Confidence 3468999999999999999999996 99999999983 310 00 000 0
Q ss_pred hhccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCC
Q 010225 133 HRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDST 212 (514)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~ 212 (514)
.+. .+. .. + ..+++..+...|.+.+++.+ +++++ .+|++++.
T Consensus 51 ----~~~-------------~~~--~~---~--~~~~~~~~~~~l~~~~~~~g-v~~~~-~~v~~i~~------------ 92 (325)
T 2q7v_A 51 ----EVE-------------NFP--GF---P--EPIAGMELAQRMHQQAEKFG-AKVEM-DEVQGVQH------------ 92 (325)
T ss_dssp ----CBC-------------CST--TC---S--SCBCHHHHHHHHHHHHHHTT-CEEEE-CCEEEEEE------------
T ss_pred ----ccc-------------cCC--CC---C--CCCCHHHHHHHHHHHHHHcC-CEEEe-eeEEEEEe------------
Confidence 000 000 00 0 01456788888999888887 89888 58999976
Q ss_pred Ccccccccc--CCe-eEEEeCCCcEEEeeE-EEecCCCch
Q 010225 213 PSATTLFTK--GHL-AKLDLSDGTSLYAKL-VGADGGKSR 248 (514)
Q Consensus 213 ~~~~~~~~~--~~~-~~v~~~~g~~~~ad~-V~AdG~~S~ 248 (514)
. ++. +.|...+|.++.+|. |.|+|.++.
T Consensus 93 --------~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~ 124 (325)
T 2q7v_A 93 --------DATSHPYPFTVRGYNGEYRAKAVILATGADPR 124 (325)
T ss_dssp --------CTTSSSCCEEEEESSCEEEEEEEEECCCEEEC
T ss_pred --------ccCCCceEEEEECCCCEEEeCEEEECcCCCcC
Confidence 1 222 667677888999999 999998654
No 88
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.99 E-value=1.1e-09 Score=115.38 Aligned_cols=139 Identities=19% Similarity=0.213 Sum_probs=88.6
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHh
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQ 132 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~ 132 (514)
...+||+|||||++|+++|+.|++. |++|+|||+++..+....... ..+....+.... + .....+++..
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~~----G~~v~iiE~~~~~GGtw~~~~---ypg~~~dv~s~~---y-~~~f~~~~~~ 87 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRSQ----GLTVRAFEAASGVGGVWYWNR---YPGARCDVESID---Y-SYSFSPELEQ 87 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSSSCTHHHHCC---CTTCBCSSCTTT---S-SCCSCHHHHH
T ss_pred CCCCCEEEECchHHHHHHHHHHHhC----CCCEEEEeCCCCCCCccccCC---CCCceeCCCchh---c-cccccccccc
Confidence 4568999999999999999999996 999999999886631100000 000000000000 0 0000000000
Q ss_pred hhccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCc--eEEcCCeeEEEeeCCCCCCcccC
Q 010225 133 HRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQ--KTIYPSRLTSMALLPSSSSISVD 210 (514)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v--~v~~~~~v~~v~~~~~~~~~~~~ 210 (514)
. .. ......++..+..+|.+.+++.+ + +++++++|++++..
T Consensus 88 ~------------------~~---------~~~~~~~~~ei~~yl~~~~~~~g-~~~~i~~~~~V~~i~~~--------- 130 (549)
T 4ap3_A 88 E------------------WN---------WSEKYATQPEILAYLEHVADRFD-LRRDIRFDTRVTSAVLD--------- 130 (549)
T ss_dssp H------------------CC---------CSSSSCBHHHHHHHHHHHHHHTT-CGGGEECSCCEEEEEEE---------
T ss_pred C------------------CC---------CccCCCCHHHHHHHHHHHHHHcC-CCccEEECCEEEEEEEc---------
Confidence 0 00 00012467889999999998887 5 89999999999871
Q ss_pred CCCccccccccCCeeEEEeCCCcEEEeeE-EEecCCCch
Q 010225 211 STPSATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKSR 248 (514)
Q Consensus 211 ~~~~~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S~ 248 (514)
++...+.|++.+|+++.||+ |.|+|..|.
T Consensus 131 ---------~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~ 160 (549)
T 4ap3_A 131 ---------EEGLRWTVRTDRGDEVSARFLVVAAGPLSN 160 (549)
T ss_dssp ---------TTTTEEEEEETTCCEEEEEEEEECCCSEEE
T ss_pred ---------CCCCEEEEEECCCCEEEeCEEEECcCCCCC
Confidence 13357899999999999999 999997654
No 89
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.99 E-value=1.3e-09 Score=106.82 Aligned_cols=115 Identities=18% Similarity=0.207 Sum_probs=79.6
Q ss_pred CCCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHH
Q 010225 52 NDDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQ 131 (514)
Q Consensus 52 ~~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~ 131 (514)
+...+||+||||||+|+++|+.|++. |++|+|||+.. ++. .+ ... .
T Consensus 13 m~~~~dvvIIG~G~aGl~aA~~l~~~----g~~v~lie~~~-~gg-~~------------~~~----------~------ 58 (319)
T 3cty_A 13 KERDFDVVIVGAGAAGFSAAVYAARS----GFSVAILDKAV-AGG-LT------------AEA----------P------ 58 (319)
T ss_dssp -CCEEEEEEECCSHHHHHHHHHHHHT----TCCEEEEESSS-TTG-GG------------GGC----------S------
T ss_pred ccCCCcEEEECcCHHHHHHHHHHHhC----CCcEEEEeCCC-CCc-cc------------ccc----------c------
Confidence 34568999999999999999999996 99999999953 210 00 000 0
Q ss_pred hhhccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCC
Q 010225 132 QHRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDS 211 (514)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~ 211 (514)
.+. .++ .. ..+.+..+...+.+.+++.+ +++++ .+|++++.
T Consensus 59 -----~~~-------------~~~--~~------~~~~~~~~~~~~~~~~~~~~-v~~~~-~~v~~i~~----------- 99 (319)
T 3cty_A 59 -----LVE-------------NYL--GF------KSIVGSELAKLFADHAANYA-KIREG-VEVRSIKK----------- 99 (319)
T ss_dssp -----CBC-------------CBT--TB------SSBCHHHHHHHHHHHHHTTS-EEEET-CCEEEEEE-----------
T ss_pred -----hhh-------------hcC--CC------cccCHHHHHHHHHHHHHHcC-CEEEE-eeEEEEEE-----------
Confidence 000 000 00 01345678888888888887 99988 68999976
Q ss_pred CCccccccccCCeeEEEeCCCcEEEeeE-EEecCCCchh
Q 010225 212 TPSATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKSRV 249 (514)
Q Consensus 212 ~~~~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S~v 249 (514)
.++.+.|.. ++.++.+|. |.|+|.++..
T Consensus 100 ---------~~~~~~v~~-~~~~~~~~~li~AtG~~~~~ 128 (319)
T 3cty_A 100 ---------TQGGFDIET-NDDTYHAKYVIITTGTTHKH 128 (319)
T ss_dssp ---------ETTEEEEEE-SSSEEEEEEEEECCCEEECC
T ss_pred ---------eCCEEEEEE-CCCEEEeCEEEECCCCCccc
Confidence 335566766 566799999 9999986543
No 90
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.98 E-value=2.5e-09 Score=113.44 Aligned_cols=65 Identities=15% Similarity=0.095 Sum_probs=49.2
Q ss_pred ehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCcccccccc-CCeeEEEe--CCCc--EEEeeE-EEe
Q 010225 169 ENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTK-GHLAKLDL--SDGT--SLYAKL-VGA 242 (514)
Q Consensus 169 ~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~--~~g~--~~~ad~-V~A 242 (514)
....+...|.+.+++.| ++|+++++|+++.. ++ +..+.|.. .+|+ ++.||. |.|
T Consensus 253 ~g~~l~~~L~~~~~~~g-v~i~~~t~v~~l~~-------------------~~~g~v~GV~~~~~~G~~~~i~A~~VVlA 312 (572)
T 1d4d_A 253 VGAHVAQVLWDNAVKRG-TDIRLNSRVVRILE-------------------DASGKVTGVLVKGEYTGYYVIKADAVVIA 312 (572)
T ss_dssp HHHHHHHHHHHHHHHTT-CEEESSEEEEEEEE-------------------C--CCEEEEEEEETTTEEEEEECSEEEEC
T ss_pred CHHHHHHHHHHHHHHcC-CeEEecCEEEEEEE-------------------CCCCeEEEEEEEeCCCcEEEEEcCEEEEe
Confidence 35688999999999887 99999999999976 11 23333443 3665 689999 999
Q ss_pred cCCCchhhhhh
Q 010225 243 DGGKSRVRELA 253 (514)
Q Consensus 243 dG~~S~vR~~l 253 (514)
+|.+|..++++
T Consensus 313 tGg~~~~~~~~ 323 (572)
T 1d4d_A 313 AGGFAKNNERV 323 (572)
T ss_dssp CCCCTTCHHHH
T ss_pred CCCCccCHHHH
Confidence 99999765443
No 91
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.98 E-value=1.6e-07 Score=98.59 Aligned_cols=40 Identities=38% Similarity=0.619 Sum_probs=36.0
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKS 97 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~ 97 (514)
..+||+|||||++||++|+.|++. |++|+|+|+++.++..
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~----G~~V~vlE~~~~~GGr 42 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDS----GLNVVVLEARDRVGGR 42 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHT----TCCEEEECSSSSSBTT
T ss_pred CCceEEEECCCHHHHHHHHHHHHC----CCCEEEEeCCCCCCCc
Confidence 457999999999999999999996 9999999999887544
No 92
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.96 E-value=1.8e-09 Score=108.01 Aligned_cols=139 Identities=17% Similarity=0.226 Sum_probs=83.3
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCc-EEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhh
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQH 133 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~-~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~ 133 (514)
.+||+|||||++|+++|+.|++. |+ +|+|||+++ ++.. |... ... ...+.+.. ....+|+.
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~----g~~~v~lie~~~-~Gg~-~~~~--~~~--~~~~~~~~--~~~~~g~~------ 65 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDF----GITDVIILEKGT-VGHS-FKHW--PKS--TRTITPSF--TSNGFGMP------ 65 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT----TCCCEEEECSSS-TTHH-HHTS--CTT--CBCSSCCC--CCGGGTCC------
T ss_pred cCcEEEECcCHHHHHHHHHHHHc----CCCcEEEEecCC-CCCc-cccC--ccc--ccccCcch--hcccCCch------
Confidence 58999999999999999999996 88 999999987 4210 0000 000 00000000 00000000
Q ss_pred hccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCC
Q 010225 134 RHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTP 213 (514)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~ 213 (514)
.+. .........+. .....+.+..+..+|.+.+++.+ ++++++++|++++.
T Consensus 66 ---~~~-----~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~~~~~~g-v~i~~~~~v~~i~~------------- 116 (369)
T 3d1c_A 66 ---DMN-----AISMDTSPAFT-------FNEEHISGETYAEYLQVVANHYE-LNIFENTVVTNISA------------- 116 (369)
T ss_dssp ---CTT-----CSSTTCCHHHH-------HCCSSCBHHHHHHHHHHHHHHTT-CEEECSCCEEEEEE-------------
T ss_pred ---hhh-----hcccccccccc-------ccccCCCHHHHHHHHHHHHHHcC-CeEEeCCEEEEEEE-------------
Confidence 000 00000000000 00012456778888888888887 99999999999986
Q ss_pred ccccccccCCeeEEEeCCCcEEEeeE-EEecCCCch
Q 010225 214 SATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKSR 248 (514)
Q Consensus 214 ~~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S~ 248 (514)
.++.+.|...++ ++.+|. |.|+|.++.
T Consensus 117 -------~~~~~~v~~~~g-~~~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 117 -------DDAYYTIATTTE-TYHADYIFVATGDYNF 144 (369)
T ss_dssp -------CSSSEEEEESSC-CEEEEEEEECCCSTTS
T ss_pred -------CCCeEEEEeCCC-EEEeCEEEECCCCCCc
Confidence 334577877777 599999 999999764
No 93
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.96 E-value=4.7e-09 Score=103.18 Aligned_cols=117 Identities=26% Similarity=0.318 Sum_probs=85.2
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhhh
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (514)
.+||+|||||++|+++|+.|++. |++|+|||+.+.++ |.+...
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~----g~~v~lie~~~~~g-----------------------------G~~~~~---- 49 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMR----QASVKIIESLPQLG-----------------------------GQLSAL---- 49 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSSSC-----------------------------HHHHHH----
T ss_pred cceEEEECCCHHHHHHHHHHHHC----CCCEEEEEcCCCCC-----------------------------ceehhc----
Confidence 57999999999999999999996 99999999998651 000000
Q ss_pred ccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCc
Q 010225 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (514)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~ 214 (514)
. +.. .+++..+ .. .+....+...|.+.+.+.+ ++++++++|++++.
T Consensus 50 ~-~~~--~~~~~~~-------------~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~i~~-------------- 95 (332)
T 3lzw_A 50 Y-PEK--YIYDVAG-------------FP---KIRAQELINNLKEQMAKFD-QTICLEQAVESVEK-------------- 95 (332)
T ss_dssp C-TTS--EECCSTT-------------CS---SEEHHHHHHHHHHHHTTSC-CEEECSCCEEEEEE--------------
T ss_pred C-CCc--eEeccCC-------------CC---CCCHHHHHHHHHHHHHHhC-CcEEccCEEEEEEE--------------
Confidence 0 000 0111000 00 1467889999999999887 99999999999987
Q ss_pred cccccccCCeeEEEeCCCcEEEeeE-EEecCCCch
Q 010225 215 ATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKSR 248 (514)
Q Consensus 215 ~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S~ 248 (514)
+.++.+.|.+.+|+ +.+|. |.|+|..+.
T Consensus 96 -----~~~~~~~v~~~~g~-~~~d~vVlAtG~~~~ 124 (332)
T 3lzw_A 96 -----QADGVFKLVTNEET-HYSKTVIITAGNGAF 124 (332)
T ss_dssp -----CTTSCEEEEESSEE-EEEEEEEECCTTSCC
T ss_pred -----CCCCcEEEEECCCE-EEeCEEEECCCCCcC
Confidence 12236788888886 99999 999999653
No 94
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.96 E-value=1.5e-09 Score=114.36 Aligned_cols=140 Identities=13% Similarity=0.139 Sum_probs=89.0
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHh
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQ 132 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~ 132 (514)
+..+||+|||||++|+++|+.|++. |++|+|||+++.++.. |... ...+ ...... .....
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~----g~~v~iiE~~~~~GGt-w~~~--~yPg--~~~d~~-----------~~~y~ 66 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQA----GMKVLGIEAGEDVGGT-WYWN--RYPG--CRLDTE-----------SYAYG 66 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSSSCTH-HHHC--CCTT--CBCSSC-----------HHHHC
T ss_pred CCCCCEEEECccHHHHHHHHHHHhC----CCCEEEEeCCCCCCCc-cccC--CCCc--eeecCc-----------hhhcc
Confidence 3568999999999999999999996 9999999999866311 1000 0000 000000 00000
Q ss_pred hhccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCc--eEEcCCeeEEEeeCCCCCCcccC
Q 010225 133 HRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQ--KTIYPSRLTSMALLPSSSSISVD 210 (514)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v--~v~~~~~v~~v~~~~~~~~~~~~ 210 (514)
... ........ .......++..+..++.+.+++.+ + .++++++|++++..
T Consensus 67 ~~f---------~~~~~~~~---------~~~~~~~~~~ei~~yl~~~~~~~~-l~~~i~~~~~V~~~~~~--------- 118 (545)
T 3uox_A 67 YFA---------LKGIIPEW---------EWSENFASQPEMLRYVNRAADAMD-VRKHYRFNTRVTAARYV--------- 118 (545)
T ss_dssp HHH---------HTTSSTTC---------CCSBSSCBHHHHHHHHHHHHHHHT-CGGGEECSCCEEEEEEE---------
T ss_pred ccc---------CcccccCC---------CccccCCCHHHHHHHHHHHHHHcC-CcCcEEECCEEEEEEEe---------
Confidence 000 00000000 000112467888898888888776 5 78999999999871
Q ss_pred CCCccccccccCCeeEEEeCCCcEEEeeE-EEecCCCchh
Q 010225 211 STPSATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKSRV 249 (514)
Q Consensus 211 ~~~~~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S~v 249 (514)
++...+.|++.+|+++.||+ |.|+|..|.-
T Consensus 119 ---------~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p 149 (545)
T 3uox_A 119 ---------ENDRLWEVTLDNEEVVTCRFLISATGPLSAS 149 (545)
T ss_dssp ---------GGGTEEEEEETTTEEEEEEEEEECCCSCBC-
T ss_pred ---------CCCCEEEEEECCCCEEEeCEEEECcCCCCCC
Confidence 13367899999999999999 9999987644
No 95
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.94 E-value=2.2e-09 Score=104.76 Aligned_cols=116 Identities=21% Similarity=0.279 Sum_probs=81.7
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhhh
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (514)
++||+||||||+|+++|+.|++. |++|+|||+.... .| . . ..
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~----g~~v~li~~~~gG---~~-------------~--~------~~---------- 42 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARK----GIRTGLMGERFGG---QI-------------L--D------TV---------- 42 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTT----TCCEEEECSSTTG---GG-------------G--G------CC----------
T ss_pred CCCEEEECcCHHHHHHHHHHHHC----CCcEEEEeCCCCc---ee-------------c--c------cc----------
Confidence 47999999999999999999996 9999999864200 00 0 0 00
Q ss_pred ccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCc
Q 010225 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (514)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~ 214 (514)
.+ .+ +. .. ...++..+...|.+.+++.+ ++++++++|+.++. +.+
T Consensus 43 -----~~--~~--------~~-----~~---~~~~~~~~~~~~~~~~~~~~-v~~~~~~~v~~i~~---------~~~-- 87 (310)
T 1fl2_A 43 -----DI--EN--------YI-----SV---PKTEGQKLAGALKVHVDEYD-VDVIDSQSASKLIP---------AAV-- 87 (310)
T ss_dssp -----EE--CC--------BT-----TB---SSEEHHHHHHHHHHHHHTSC-EEEECSCCEEEEEC---------CSS--
T ss_pred -----cc--cc--------cc-----Cc---CCCCHHHHHHHHHHHHHHcC-CeEEccCEEEEEEe---------ccc--
Confidence 00 00 00 00 01356788888988888877 99999999999975 100
Q ss_pred cccccccCCeeEEEeCCCcEEEeeE-EEecCCCchh
Q 010225 215 ATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKSRV 249 (514)
Q Consensus 215 ~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S~v 249 (514)
.+..+.|.+++|.++.+|. |.|+|.++..
T Consensus 88 ------~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~ 117 (310)
T 1fl2_A 88 ------EGGLHQIETASGAVLKARSIIVATGAKWRN 117 (310)
T ss_dssp ------TTCCEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred ------CCceEEEEECCCCEEEeCEEEECcCCCcCC
Confidence 1246788888888899999 9999987643
No 96
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.93 E-value=3.7e-09 Score=112.58 Aligned_cols=65 Identities=18% Similarity=0.203 Sum_probs=49.9
Q ss_pred hHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCccccccccCCe--eEEE-eCCCc--EEEeeE-EEec
Q 010225 170 NKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHL--AKLD-LSDGT--SLYAKL-VGAD 243 (514)
Q Consensus 170 r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~-~~~g~--~~~ad~-V~Ad 243 (514)
...+...|.+.+.+.++++|+++++|+++.. +++.. +.+. ..+|+ ++.|+. |.|+
T Consensus 133 g~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~-------------------~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAt 193 (602)
T 1kf6_A 133 GFHMLHTLFQTSLQFPQIQRFDEHFVLDILV-------------------DDGHVRGLVAMNMMEGTLVQIRANAVVMAT 193 (602)
T ss_dssp HHHHHHHHHHHHTTCTTEEEEETEEEEEEEE-------------------ETTEEEEEEEEETTTTEEEEEECSCEEECC
T ss_pred HHHHHHHHHHHHHhCCCcEEEeCCEEEEEEE-------------------eCCEEEEEEEEEcCCCcEEEEEcCeEEECC
Confidence 3578899999998887799999999999986 11222 2222 35776 699999 9999
Q ss_pred CCCchhhhhh
Q 010225 244 GGKSRVRELA 253 (514)
Q Consensus 244 G~~S~vR~~l 253 (514)
|.+|.++...
T Consensus 194 Gg~s~~~~~~ 203 (602)
T 1kf6_A 194 GGAGRVYRYN 203 (602)
T ss_dssp CCCGGGSSSB
T ss_pred CCCcccccCc
Confidence 9999997654
No 97
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.92 E-value=2.3e-07 Score=95.47 Aligned_cols=40 Identities=43% Similarity=0.569 Sum_probs=36.0
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKS 97 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~ 97 (514)
.++||+|||||++||++|+.|++. |++|+|+|+++.++..
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~----g~~v~v~E~~~~~GG~ 43 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKA----GLSVAVIEARDRVGGR 43 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSSSCTT
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC----CCcEEEEECCCCCCCc
Confidence 468999999999999999999996 9999999999877544
No 98
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.91 E-value=1.3e-09 Score=112.85 Aligned_cols=148 Identities=11% Similarity=0.106 Sum_probs=86.3
Q ss_pred ccEEEECCCHHHHHHHHHhcc---CCCCCCcE---EEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHH
Q 010225 56 YDVAVVGGGMVGMALACSLAS---MPLTKHLS---VAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQY 129 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~---~~~~~g~~---V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~ 129 (514)
+||+||||||+|+++|..|++ . |++ |+|||+.+.++....+... . +..+ .|+..
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~----G~~~~~V~v~E~~~~~GG~w~~~~~---~----g~~~--------~g~~~- 62 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEK----GAEIPELVCFEKQADWGGQWNYTWR---T----GLDE--------NGEPV- 62 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHT----TCCCCEEEEECSSSSSCGGGSCCSC---C----SBCT--------TSSBC-
T ss_pred CcEEEECccHHHHHHHHHHHhhhhc----CCCCCcEEEEEcCCCCCCEeecCCC---C----Cccc--------cCCCC-
Confidence 699999999999999999998 7 888 9999999876422111000 0 0000 01000
Q ss_pred HHhhhccCcceEEEEeCCCcce-----eeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCce--EEcCCeeEEEeeCC
Q 010225 130 VQQHRHAYFDKMQVWDYTGLGY-----TKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQK--TIYPSRLTSMALLP 202 (514)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~--v~~~~~v~~v~~~~ 202 (514)
.. ..+..+. ....... ..++.. .. ......+++..+.++|.+.+++.+ ++ ++++++|++++..
T Consensus 63 -~~---~~y~~l~--~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~l~~~l~~~~~~~g-v~~~i~~~~~V~~v~~~- 132 (464)
T 2xve_A 63 -HS---SMYRYLW--SNGPKECLEFADYTFDEH-FG-KPIASYPPREVLWDYIKGRVEKAG-VRKYIRFNTAVRHVEFN- 132 (464)
T ss_dssp -CC---CCCTTCB--CSSCGGGTCBTTBCHHHH-HS-SCCCSSCBHHHHHHHHHHHHHHHT-CGGGEECSEEEEEEEEE-
T ss_pred -cC---ccccchh--hcCChhhcccCCCCCCcc-cC-CCCCCCCCHHHHHHHHHHHHHHcC-CcceEEeCCEEEEEEEc-
Confidence 00 0000000 0000000 000000 00 000123578899999999988876 77 9999999999861
Q ss_pred CCCCcccCCCCccccccccCCeeEEEeCC---C--cEEEeeE-EEecCCCchhh
Q 010225 203 SSSSISVDSTPSATTLFTKGHLAKLDLSD---G--TSLYAKL-VGADGGKSRVR 250 (514)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~---g--~~~~ad~-V~AdG~~S~vR 250 (514)
++...+.|.+.+ | .++.+|. |.|+|.+|.-+
T Consensus 133 -----------------~~~~~~~V~~~~~~~g~~~~~~~d~VVvAtG~~s~p~ 169 (464)
T 2xve_A 133 -----------------EDSQTFTVTVQDHTTDTIYSEEFDYVVCCTGHFSTPY 169 (464)
T ss_dssp -----------------TTTTEEEEEEEETTTTEEEEEEESEEEECCCSSSSBC
T ss_pred -----------------CCCCcEEEEEEEcCCCceEEEEcCEEEECCCCCCCCc
Confidence 012356776654 4 4689999 99999876554
No 99
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.91 E-value=3e-09 Score=105.13 Aligned_cols=116 Identities=17% Similarity=0.157 Sum_probs=80.2
Q ss_pred CCCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHH
Q 010225 52 NDDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQ 131 (514)
Q Consensus 52 ~~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~ 131 (514)
+++.+||+||||||+|+++|+.|++. |++|+|||+.... +. +.
T Consensus 11 ~~~~~~vvIIG~G~aGl~aA~~l~~~----g~~v~lie~~~~g---------------g~-~~----------------- 53 (335)
T 2a87_A 11 HHPVRDVIVIGSGPAGYTAALYAARA----QLAPLVFEGTSFG---------------GA-LM----------------- 53 (335)
T ss_dssp CCCCEEEEEECCHHHHHHHHHHHHHT----TCCCEEECCSSCS---------------CG-GG-----------------
T ss_pred cCCcCCEEEECCCHHHHHHHHHHHhC----CCeEEEEecCCCC---------------Cc-ee-----------------
Confidence 34568999999999999999999996 9999999975311 00 00
Q ss_pred hhhccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCC
Q 010225 132 QHRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDS 211 (514)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~ 211 (514)
. ..... .++ ... ..+.+..+...|.+.+.+.+ +++++++ |++++.
T Consensus 54 ~--~~~~~-------------~~~--~~~-----~~~~~~~~~~~l~~~~~~~~-v~~~~~~-v~~i~~----------- 98 (335)
T 2a87_A 54 T--TTDVE-------------NYP--GFR-----NGITGPELMDEMREQALRFG-ADLRMED-VESVSL----------- 98 (335)
T ss_dssp S--CSCBC-------------CST--TCT-----TCBCHHHHHHHHHHHHHHTT-CEEECCC-EEEEEC-----------
T ss_pred c--cchhh-------------hcC--CCC-----CCCCHHHHHHHHHHHHHHcC-CEEEEee-EEEEEe-----------
Confidence 0 00000 000 000 01456778888888888877 9999986 888853
Q ss_pred CCccccccccCCeeEE-EeCCCcEEEeeE-EEecCCCchh
Q 010225 212 TPSATTLFTKGHLAKL-DLSDGTSLYAKL-VGADGGKSRV 249 (514)
Q Consensus 212 ~~~~~~~~~~~~~~~v-~~~~g~~~~ad~-V~AdG~~S~v 249 (514)
.+.+.| .+.+|.++.+|. |.|+|.++..
T Consensus 99 ----------~~~~~v~~~~~g~~~~~d~lviAtG~~~~~ 128 (335)
T 2a87_A 99 ----------HGPLKSVVTADGQTHRARAVILAMGAAARY 128 (335)
T ss_dssp ----------SSSSEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred ----------CCcEEEEEeCCCCEEEeCEEEECCCCCccC
Confidence 134566 677888899999 9999986643
No 100
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.90 E-value=2.1e-09 Score=105.29 Aligned_cols=114 Identities=15% Similarity=0.214 Sum_probs=78.9
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhh
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQH 133 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~ 133 (514)
+.+||+||||||+|+++|+.|++. |++|+|||+.. ++ + .+ ..
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~----g~~v~lie~~~-~g--------------g-~~-----------------~~- 45 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARA----NLQPVLITGME-KG--------------G-QL-----------------TT- 45 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTT----TCCCEEECCSS-TT--------------G-GG-----------------GG-
T ss_pred CcCCEEEECcCHHHHHHHHHHHHC----CCcEEEEccCC-CC--------------c-eE-----------------ec-
Confidence 458999999999999999999996 99999999653 21 0 00 00
Q ss_pred hccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCC
Q 010225 134 RHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTP 213 (514)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~ 213 (514)
..... .++ ... ..+.+..+...+.+.+.+.+ +++++++ |+.++.
T Consensus 46 -~~~~~-------------~~~--~~~-----~~~~~~~~~~~~~~~~~~~~-~~~~~~~-v~~i~~------------- 89 (320)
T 1trb_A 46 -TTEVE-------------NWP--GDP-----NDLTGPLLMERMHEHATKFE-TEIIFDH-INKVDL------------- 89 (320)
T ss_dssp -CSBCC-------------CST--TCC-----SSCBHHHHHHHHHHHHHHTT-CEEECCC-EEEEEC-------------
T ss_pred -chhhh-------------hCC--CCC-----CCCCHHHHHHHHHHHHHHCC-CEEEEee-eeEEEe-------------
Confidence 00000 000 000 01356778888888888887 9999985 888875
Q ss_pred ccccccccCCeeEEEeCCCcEEEeeE-EEecCCCchh
Q 010225 214 SATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKSRV 249 (514)
Q Consensus 214 ~~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S~v 249 (514)
..+.+.+ ..++.++.+|. |.|+|..+..
T Consensus 90 -------~~~~~~v-~~~~~~~~~~~lv~AtG~~~~~ 118 (320)
T 1trb_A 90 -------QNRPFRL-NGDNGEYTCDALIIATGASARY 118 (320)
T ss_dssp -------SSSSEEE-EESSCEEEEEEEEECCCEEECC
T ss_pred -------cCCEEEE-EeCCCEEEcCEEEECCCCCcCC
Confidence 3355666 56788899999 9999987543
No 101
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.90 E-value=3.3e-08 Score=103.31 Aligned_cols=73 Identities=19% Similarity=0.227 Sum_probs=49.1
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCC-CC-CCCceE---EeChhhHHHHHHcCCc
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKE-DP-PDPRVS---TVTPATISFFKEIGAW 127 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~-~~-~~~~~~---~l~~~~~~~l~~lgl~ 127 (514)
.+.+||+|||||++||++|+.|++. |++|+|+|+.+.++........ .. ...... ...+...++++++|+.
T Consensus 11 ~~~~~v~iiG~G~~Gl~aA~~l~~~----g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~lgl~ 86 (504)
T 1sez_A 11 SSAKRVAVIGAGVSGLAAAYKLKIH----GLNVTVFEAEGKAGGKLRSVSQDGLIWDEGANTMTESEGDVTFLIDSLGLR 86 (504)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHTT----SCEEEEECSSSSSCSSCCEEEETTEEEESSCCCBCCCSHHHHHHHHHTTCG
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHC----CCcEEEEEeCCCCCCceeeeccCCeEEecCCcccccCcHHHHHHHHHcCCc
Confidence 3468999999999999999999996 9999999999987543211000 00 000001 1246678888999875
Q ss_pred HH
Q 010225 128 QY 129 (514)
Q Consensus 128 ~~ 129 (514)
+.
T Consensus 87 ~~ 88 (504)
T 1sez_A 87 EK 88 (504)
T ss_dssp GG
T ss_pred cc
Confidence 43
No 102
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.90 E-value=2.9e-09 Score=110.20 Aligned_cols=154 Identities=14% Similarity=0.145 Sum_probs=85.8
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCC-----cEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcH
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKH-----LSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQ 128 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g-----~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~ 128 (514)
..+||+||||||+|+++|+.|++. | ++|+|||+.+.++.... ... .+..++.. +++.+.-
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~----g~~~~~~~v~liE~~~~~g~~~~---~~~---~~~~~~~~---~~~~l~~-- 93 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQER----AQAQGALEVLFLDKQGDYRWHGN---TLV---SQSELQIS---FLKDLVS-- 93 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHH----HHHHCCCCEEEEESCSSCCSSGG---GCC---SSCBCSSC---TTSSSST--
T ss_pred CcCCEEEECCCHHHHHHHHHHHhc----ccccCcccEEEEecCCCCCCcCC---CCC---CCCcCCcc---hhhcccc--
Confidence 458999999999999999999996 8 89999999987641110 000 00001000 0000000
Q ss_pred HHHhhhccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcc
Q 010225 129 YVQQHRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSIS 208 (514)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~ 208 (514)
+.. ....+....+....+ ....+. ........+..+..+|...+.+.+ ++++++++|++++..
T Consensus 94 -~~~-p~~~~~~~~~l~~~~-~~~~~~------~~~~~~~~~~~~~~~l~~~~~~~~-~~i~~~~~V~~i~~~------- 156 (463)
T 3s5w_A 94 -LRN-PTSPYSFVNYLHKHD-RLVDFI------NLGTFYPCRMEFNDYLRWVASHFQ-EQSRYGEEVLRIEPM------- 156 (463)
T ss_dssp -TTC-TTCTTSHHHHHHHTT-CHHHHH------HHCCSCCBHHHHHHHHHHHHTTCT-TTEEESEEEEEEEEE-------
T ss_pred -ccC-CCCCCChhHhhhhcC-ceeecc------cccCCCCCHHHHHHHHHHHHHHcC-CeEEeCCEEEEEEEe-------
Confidence 000 000000000000000 000000 000122467889999999888887 899999999999861
Q ss_pred cCCCCccccccccCCe--eEEEeCCCc----EEEeeE-EEecCCCchh
Q 010225 209 VDSTPSATTLFTKGHL--AKLDLSDGT----SLYAKL-VGADGGKSRV 249 (514)
Q Consensus 209 ~~~~~~~~~~~~~~~~--~~v~~~~g~----~~~ad~-V~AdG~~S~v 249 (514)
. +.+.. +.|...+|. ++.||. |.|+|....+
T Consensus 157 --~--------~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~~p~~ 194 (463)
T 3s5w_A 157 --L--------SAGQVEALRVISRNADGEELVRTTRALVVSPGGTPRI 194 (463)
T ss_dssp --E--------ETTEEEEEEEEEEETTSCEEEEEESEEEECCCCEECC
T ss_pred --c--------CCCceEEEEEEEecCCCceEEEEeCEEEECCCCCCCC
Confidence 0 01222 467766665 799999 9999985443
No 103
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.84 E-value=1.6e-07 Score=102.48 Aligned_cols=39 Identities=23% Similarity=0.508 Sum_probs=35.6
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGK 96 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~ 96 (514)
..+||+|||||++|+++|+.|++. |++|+|+|+.+.++.
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~~----g~~v~v~E~~~~~gg 373 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHNF----GIKVTVLEAKDRIGG 373 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHH----TCEEEEECSSSSSCT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC----CCcEEEEecccceec
Confidence 468999999999999999999996 999999999887764
No 104
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.84 E-value=7.3e-09 Score=108.97 Aligned_cols=38 Identities=29% Similarity=0.576 Sum_probs=34.0
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCC
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALG 95 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~ 95 (514)
..++||+|||||++||++|+.|++ |.+|+||||.+..+
T Consensus 6 ~~~~DVvVVG~G~AGl~aAl~la~-----G~~V~vlEk~~~~~ 43 (540)
T 1chu_A 6 EHSCDVLIIGSGAAGLSLALRLAD-----QHQVIVLSKGPVTE 43 (540)
T ss_dssp SEECSEEEECCSHHHHHHHHHHTT-----TSCEEEECSSCTTC
T ss_pred CCCCCEEEECccHHHHHHHHHHhc-----CCcEEEEECCCCCC
Confidence 346899999999999999999998 68999999998654
No 105
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.83 E-value=1.5e-08 Score=104.86 Aligned_cols=61 Identities=18% Similarity=0.114 Sum_probs=44.6
Q ss_pred hHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCccccccccCCee-EEEeC-CCcEEEeeE-EEecCCC
Q 010225 170 NKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLA-KLDLS-DGTSLYAKL-VGADGGK 246 (514)
Q Consensus 170 r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~-~g~~~~ad~-V~AdG~~ 246 (514)
...+.+.|.+.+++.+ ++++++++| ++.. +++.+ .+... ++.++.||. |.|+|.+
T Consensus 118 g~~l~~~L~~~~~~~g-v~i~~~~~v-~l~~--------------------~~~~v~Gv~v~~~~g~~~a~~VVlAtGg~ 175 (472)
T 2e5v_A 118 GREIFNFLLKLAREEG-IPIIEDRLV-EIRV--------------------KDGKVTGFVTEKRGLVEDVDKLVLATGGY 175 (472)
T ss_dssp HHHHHHHHHHHHHHTT-CCEECCCEE-EEEE--------------------ETTEEEEEEETTTEEECCCSEEEECCCCC
T ss_pred HHHHHHHHHHHHHhCC-CEEEECcEE-EEEE--------------------eCCEEEEEEEEeCCCeEEeeeEEECCCCC
Confidence 4678888999887666 999999999 9976 22322 33332 223477999 9999999
Q ss_pred chhhhh
Q 010225 247 SRVREL 252 (514)
Q Consensus 247 S~vR~~ 252 (514)
|.+...
T Consensus 176 ~~~~~~ 181 (472)
T 2e5v_A 176 SYLYEY 181 (472)
T ss_dssp GGGSSS
T ss_pred cccCcc
Confidence 988654
No 106
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.83 E-value=1.4e-08 Score=99.14 Aligned_cols=118 Identities=16% Similarity=0.164 Sum_probs=77.7
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhh
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQH 133 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~ 133 (514)
..|||+||||||||+++|+.|++. |++|+|||+....+. | .. + .+. .
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~----g~~v~liE~~~~gg~--~------~~--G-~~~-----------------~- 49 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRS----SLKPVMYEGFMAGGV--A------AG--G-QLT-----------------T- 49 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT----TCCCEEECCSSGGGC--C------TT--C-GGG-----------------G-
T ss_pred CCCcEEEECCCHHHHHHHHHHHHC----CCCEEEEecCCCCCc--c------cC--C-CcC-----------------C-
Confidence 469999999999999999999996 999999998764310 0 00 0 000 0
Q ss_pred hccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCC
Q 010225 134 RHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTP 213 (514)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~ 213 (514)
.. .+.+..+ .+ ..++..++...+.+.+++.+ +++... .+.....
T Consensus 50 ----~~--~i~~~~g-------------~~--~~i~~~~l~~~~~~~~~~~~-~~~~~~-~v~~~~~------------- 93 (314)
T 4a5l_A 50 ----TT--IIENFPG-------------FP--NGIDGNELMMNMRTQSEKYG-TTIITE-TIDHVDF------------- 93 (314)
T ss_dssp ----SS--EECCSTT-------------CT--TCEEHHHHHHHHHHHHHHTT-CEEECC-CEEEEEC-------------
T ss_pred ----hH--HhhhccC-------------Cc--ccCCHHHHHHHHHHHHhhcC-cEEEEe-EEEEeec-------------
Confidence 00 0000000 00 01456778888888888877 776665 5665554
Q ss_pred ccccccccCCeeEEEeCCCcEEEeeE-EEecCCCc
Q 010225 214 SATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKS 247 (514)
Q Consensus 214 ~~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S 247 (514)
......+...++.++.+|. |.|+|...
T Consensus 94 -------~~~~~~~~~~~~~~~~~~~liiATG~~~ 121 (314)
T 4a5l_A 94 -------STQPFKLFTEEGKEVLTKSVIIATGATA 121 (314)
T ss_dssp -------SSSSEEEEETTCCEEEEEEEEECCCEEE
T ss_pred -------CCCceEEEECCCeEEEEeEEEEcccccc
Confidence 3345666677888999999 99999743
No 107
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.82 E-value=1.4e-08 Score=108.00 Aligned_cols=38 Identities=21% Similarity=0.354 Sum_probs=34.5
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALG 95 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~ 95 (514)
.++||+|||||++||++|+.|++. |.+|+||||.+..+
T Consensus 6 ~~~DVvVVGaG~AGl~AA~~la~~----G~~V~vlEK~~~~~ 43 (588)
T 2wdq_A 6 REFDAVVIGAGGAGMRAALQISQS----GQTCALLSKVFPTR 43 (588)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT----TCCEEEEESSCGGG
T ss_pred ccCCEEEECcCHHHHHHHHHHHHC----CCcEEEEecCCCCC
Confidence 468999999999999999999996 99999999987653
No 108
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.80 E-value=1.2e-08 Score=107.04 Aligned_cols=117 Identities=22% Similarity=0.306 Sum_probs=83.0
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHh
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQ 132 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~ 132 (514)
...+||+||||||+|+++|+.|++. |++|+|+|+.... .| . . ..++
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~----G~~v~lie~~~GG---~~------~-------~--------~~~~------ 255 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARK----GIRTGLMGERFGG---QV------L-------D--------TVDI------ 255 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHT----TCCEEEECSSTTG---GG------T-------T--------CSCB------
T ss_pred cCcccEEEECCcHHHHHHHHHHHhC----CCeEEEEECCCCC---cc------c-------c--------cccc------
Confidence 4578999999999999999999996 9999999863210 00 0 0 0000
Q ss_pred hhccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCC
Q 010225 133 HRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDST 212 (514)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~ 212 (514)
. .+. ... ......+...|.+.+++.+ ++++.+++|+.+.. +.
T Consensus 256 ------~-------------~~~-----~~~---~~~~~~l~~~l~~~~~~~g-v~v~~~~~v~~i~~---------~~- 297 (521)
T 1hyu_A 256 ------E-------------NYI-----SVP---KTEGQKLAGALKAHVSDYD-VDVIDSQSASKLVP---------AA- 297 (521)
T ss_dssp ------C-------------CBT-----TBS---SBCHHHHHHHHHHHHHTSC-EEEECSCCEEEEEC---------CS-
T ss_pred ------c-------------ccC-----CCC---CCCHHHHHHHHHHHHHHcC-CEEEcCCEEEEEEe---------cc-
Confidence 0 000 000 1346778888999998887 99999999999975 10
Q ss_pred CccccccccCCeeEEEeCCCcEEEeeE-EEecCCCch
Q 010225 213 PSATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKSR 248 (514)
Q Consensus 213 ~~~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S~ 248 (514)
+.++.+.|.+.+|.++.+|. |.|+|.++.
T Consensus 298 -------~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~ 327 (521)
T 1hyu_A 298 -------TEGGLHQIETASGAVLKARSIIIATGAKWR 327 (521)
T ss_dssp -------STTSCEEEEETTSCEEEEEEEEECCCEEEC
T ss_pred -------CCCceEEEEECCCCEEEcCEEEECCCCCcC
Confidence 01246788888898999999 999998654
No 109
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.80 E-value=4.4e-08 Score=102.17 Aligned_cols=58 Identities=14% Similarity=0.068 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCccccccccCCeeEEEeCCCcEEEeeE-EEecCCCch
Q 010225 171 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKSR 248 (514)
Q Consensus 171 ~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S~ 248 (514)
..+.+.|.+.+.+.|+++|+++++|++|+. .++.+.|++.+|+++.||. |.|.|....
T Consensus 255 ~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~--------------------~~~~v~v~~~~g~~~~ad~vI~a~~~~~l 313 (495)
T 2vvm_A 255 SAFARRFWEEAAGTGRLGYVFGCPVRSVVN--------------------ERDAARVTARDGREFVAKRVVCTIPLNVL 313 (495)
T ss_dssp HHHHHHHHHHHHTTTCEEEESSCCEEEEEE--------------------CSSSEEEEETTCCEEEEEEEEECCCGGGG
T ss_pred HHHHHHHHHHhhhcCceEEEeCCEEEEEEE--------------------cCCEEEEEECCCCEEEcCEEEECCCHHHH
Confidence 456677777777765588999999999987 3456888888998899999 999997543
No 110
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.77 E-value=6.6e-09 Score=110.66 Aligned_cols=38 Identities=24% Similarity=0.357 Sum_probs=34.4
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALG 95 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~ 95 (514)
.++||||||||++||++|+.|++. |.+|+||||....+
T Consensus 17 ~~~DVvVVG~G~AGl~AAl~aa~~----G~~V~vlEK~~~~~ 54 (621)
T 2h88_A 17 HEFDAVVVGAGGAGLRAAFGLSEA----GFNTACVTKLFPTR 54 (621)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT----TCCEEEEESSCGGG
T ss_pred ccCCEEEECccHHHHHHHHHHHHC----CCcEEEEeccCCCC
Confidence 468999999999999999999996 99999999987553
No 111
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.75 E-value=5.2e-08 Score=104.50 Aligned_cols=38 Identities=26% Similarity=0.413 Sum_probs=34.4
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
+.++||||||||++||++|+.|++. |.+|+||||....
T Consensus 3 ~~~~DVvVIGgG~AGL~AAl~aae~----G~~V~vlEK~~~~ 40 (660)
T 2bs2_A 3 VQYCDSLVIGGGLAGLRAAVATQQK----GLSTIVLSLIPVK 40 (660)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHTT----TCCEEEECSSCGG
T ss_pred cccccEEEECchHHHHHHHHHHHHC----CCcEEEEeccCCC
Confidence 3468999999999999999999996 9999999998765
No 112
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.74 E-value=4.2e-08 Score=95.73 Aligned_cols=36 Identities=25% Similarity=0.507 Sum_probs=33.2
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
..+|||+||||||||+++|+.|++. |++|+|||++.
T Consensus 4 e~~yDvvIIG~GpAGl~aA~~l~~~----g~~V~liE~~~ 39 (312)
T 4gcm_A 4 EIDFDIAIIGAGPAGMTAAVYASRA----NLKTVMIERGI 39 (312)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHT----TCCEEEEESSC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHC----CCCEEEEecCC
Confidence 4579999999999999999999997 99999999864
No 113
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.73 E-value=1.3e-08 Score=105.18 Aligned_cols=142 Identities=18% Similarity=0.163 Sum_probs=83.2
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeC---hhhHHHHHHcCCcHHHH
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVT---PATISFFKEIGAWQYVQ 131 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~l~~lgl~~~~~ 131 (514)
++||+||||||+|+++|+.|++. |++|+|||++. .+ +..+. ..+..++...++++.+.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~----G~~V~liE~~~-~g--------------G~~~~~g~~psk~ll~~~~~~~~~~ 63 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQL----GLSTAIVEPKY-WG--------------GVCLNVGCIPSKALLRNAELVHIFT 63 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT----TCCEEEECSSC-TT--------------HHHHHHSHHHHHHHHHHHHHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhC----CCeEEEEeCCC-CC--------------CcccccCchhhHHHHHHHHHHHHHH
Confidence 58999999999999999999996 99999999983 21 11111 12333444444444443
Q ss_pred hhhccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCC
Q 010225 132 QHRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDS 211 (514)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~ 211 (514)
.... . ..+. .. ....+.. ..... .. -...+...+.+.+++.+ ++++.++.+. +
T Consensus 64 ~~~~-~-~g~~--~~---~~~~~~~--~~~~~-~~--~~~~l~~~l~~~~~~~g-v~~~~g~~~~-i------------- 116 (464)
T 2a8x_A 64 KDAK-A-FGIS--GE---VTFDYGI--AYDRS-RK--VAEGRVAGVHFLMKKNK-ITEIHGYGTF-A------------- 116 (464)
T ss_dssp HHTT-T-TTEE--EC---CEECHHH--HHHHH-HH--HHHHHHHHHHHHHHHTT-CEEECEEEEE-S-------------
T ss_pred HHHH-h-cCCC--CC---CccCHHH--HHHHH-HH--HHHHHHHHHHHHHHhCC-CEEEEeEEEE-e-------------
Confidence 1111 1 1121 10 0111100 00000 00 01334555666676665 9999987543 3
Q ss_pred CCccccccccCCeeEEEeCCC--cEEEeeE-EEecCCCchhhh
Q 010225 212 TPSATTLFTKGHLAKLDLSDG--TSLYAKL-VGADGGKSRVRE 251 (514)
Q Consensus 212 ~~~~~~~~~~~~~~~v~~~~g--~~~~ad~-V~AdG~~S~vR~ 251 (514)
+.+.+.|.+.+| .++.+|. |.|+|..+.+..
T Consensus 117 ---------d~~~v~V~~~~G~~~~~~~d~lViAtG~~~~~~~ 150 (464)
T 2a8x_A 117 ---------DANTLLVDLNDGGTESVTFDNAIIATGSSTRLVP 150 (464)
T ss_dssp ---------SSSEEEEEETTSCCEEEEEEEEEECCCEEECCCT
T ss_pred ---------cCCeEEEEeCCCceEEEEcCEEEECCCCCCCCCC
Confidence 225677888788 6899999 999999876533
No 114
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.72 E-value=2.1e-08 Score=104.24 Aligned_cols=58 Identities=17% Similarity=0.195 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCccccccccCCeeEEEeCCCcEEEeeE-EEecCCCchh
Q 010225 171 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKSRV 249 (514)
Q Consensus 171 ~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S~v 249 (514)
..+...|.+.+++.| ++++++++|++++. .++.+.|.+.+|+++.||. |.|.|..+..
T Consensus 232 ~~~~~~l~~~l~~~G-v~i~~~~~V~~i~~--------------------~~~~v~v~~~~g~~i~aD~Vi~A~G~~p~~ 290 (484)
T 3o0h_A 232 YDLRQLLNDAMVAKG-ISIIYEATVSQVQS--------------------TENCYNVVLTNGQTICADRVMLATGRVPNT 290 (484)
T ss_dssp HHHHHHHHHHHHHHT-CEEESSCCEEEEEE--------------------CSSSEEEEETTSCEEEESEEEECCCEEECC
T ss_pred HHHHHHHHHHHHHCC-CEEEeCCEEEEEEe--------------------eCCEEEEEECCCcEEEcCEEEEeeCCCcCC
Confidence 346777778888777 99999999999986 3455788899998999999 9999986655
No 115
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.70 E-value=1.5e-08 Score=105.19 Aligned_cols=37 Identities=27% Similarity=0.472 Sum_probs=33.7
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
.++||+||||||+|+++|+.|++. |++|+|||+.+.+
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~----G~~V~liE~~~~~ 40 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQL----GFNTACVEKRGKL 40 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT----TCCEEEEESSSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC----CCeEEEEecCCCc
Confidence 468999999999999999999996 9999999997654
No 116
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.68 E-value=1.5e-08 Score=103.67 Aligned_cols=37 Identities=19% Similarity=0.455 Sum_probs=32.9
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCc--EEEEEcCCCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHL--SVAIIDSNPAL 94 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~--~V~viE~~~~~ 94 (514)
+.+||+|||||++|+++|..|++. |+ +|+|||+.+..
T Consensus 3 ~~~~vvIIGgG~aGl~aA~~l~~~----g~~~~V~lie~~~~~ 41 (431)
T 1q1r_A 3 ANDNVVIVGTGLAGVEVAFGLRAS----GWEGNIRLVGDATVI 41 (431)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHT----TCCSEEEEECSCCSC
T ss_pred CCCcEEEEcCHHHHHHHHHHHHcc----CcCCCEEEEECCCCC
Confidence 468999999999999999999996 77 89999988743
No 117
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.66 E-value=8.1e-08 Score=103.16 Aligned_cols=37 Identities=24% Similarity=0.431 Sum_probs=33.6
Q ss_pred CCccEEEECCCHHHHHHHHHhc---c-CCCCCCcEEEEEcCCCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLA---S-MPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~---~-~~~~~g~~V~viE~~~~~ 94 (514)
.++||||||||++||++|+.|+ + . |.+|+||||....
T Consensus 21 ~~~DVvVIG~G~AGl~AAl~aa~~~~~~----G~~V~vlEK~~~~ 61 (643)
T 1jnr_A 21 VETDILIIGGGFSGCGAAYEAAYWAKLG----GLKVTLVEKAAVE 61 (643)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHTTT----TCCEEEECSSCTT
T ss_pred ccCCEEEECcCHHHHHHHHHHhhhhhhC----CCeEEEEeCcCCC
Confidence 4689999999999999999999 5 5 8999999999854
No 118
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.62 E-value=5.1e-08 Score=100.99 Aligned_cols=37 Identities=32% Similarity=0.510 Sum_probs=34.0
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
.++||+||||||+|+++|+.|++. |++|+|||+++.+
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~----g~~V~liE~~~~~ 41 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQL----GFKTTCIEKRGAL 41 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHH----TCCEEEEECSSSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHC----CCeEEEEeCCCCc
Confidence 468999999999999999999996 9999999998755
No 119
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.62 E-value=6.5e-08 Score=100.06 Aligned_cols=37 Identities=35% Similarity=0.473 Sum_probs=33.9
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
+++||+||||||+|+++|+.|++. |++|+||||++.+
T Consensus 3 ~~~DVvVIGgG~aGl~aA~~l~~~----G~~V~liEk~~~~ 39 (466)
T 3l8k_A 3 LKYDVVVIGAGGAGYHGAFRLAKA----KYNVLMADPKGEL 39 (466)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT----TCCEEEECTTSSS
T ss_pred ccceEEEECCCHHHHHHHHHHHhC----CCeEEEEECCCCC
Confidence 368999999999999999999996 9999999987765
No 120
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.61 E-value=1.4e-08 Score=105.60 Aligned_cols=38 Identities=42% Similarity=0.621 Sum_probs=34.1
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
+.++||+|||||++|+++|+.|++. |++|+|||+++.+
T Consensus 4 ~~~~dVvIIGaG~aGl~aA~~l~~~----G~~V~liE~~~~~ 41 (482)
T 1ojt_A 4 DAEYDVVVLGGGPGGYSAAFAAADE----GLKVAIVERYKTL 41 (482)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHT----TCCEEEEESSSCS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhC----CCeEEEEeCCCCC
Confidence 3468999999999999999999996 9999999997654
No 121
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.61 E-value=9.3e-08 Score=93.07 Aligned_cols=110 Identities=17% Similarity=0.215 Sum_probs=75.3
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEE-EcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHh
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAI-IDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQ 132 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~v-iE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~ 132 (514)
..+||+|||||++|+++|+.|++. |++|+| +||.. ++.. | . .. .
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~----g~~v~li~e~~~-~gG~-~--------------~-~~-------~------- 47 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRG----GLKNVVMFEKGM-PGGQ-I--------------T-SS-------S------- 47 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHH----TCSCEEEECSSS-TTGG-G--------------G-GC-------S-------
T ss_pred CCceEEEECCCHHHHHHHHHHHHC----CCCeEEEEeCCC-CCce-e--------------e-ee-------c-------
Confidence 458999999999999999999996 999999 99933 3100 0 0 00 0
Q ss_pred hhccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCC
Q 010225 133 HRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDST 212 (514)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~ 212 (514)
.+. .++ .. ...+....+...+.+.+++.+ ++++++ +|+++ .
T Consensus 48 ----~~~-------------~~~-----~~--~~~~~~~~~~~~~~~~~~~~~-v~~~~~-~v~~i-~------------ 88 (315)
T 3r9u_A 48 ----EIE-------------NYP-----GV--AQVMDGISFMAPWSEQCMRFG-LKHEMV-GVEQI-L------------ 88 (315)
T ss_dssp ----CBC-------------CST-----TC--CSCBCHHHHHHHHHHHHTTTC-CEEECC-CEEEE-E------------
T ss_pred ----eec-------------cCC-----CC--CCCCCHHHHHHHHHHHHHHcC-cEEEEE-EEEEE-e------------
Confidence 000 000 00 012457888999999999887 999998 89998 6
Q ss_pred CccccccccC--CeeEEEe-CCCcEEEeeE-EEecCCC
Q 010225 213 PSATTLFTKG--HLAKLDL-SDGTSLYAKL-VGADGGK 246 (514)
Q Consensus 213 ~~~~~~~~~~--~~~~v~~-~~g~~~~ad~-V~AdG~~ 246 (514)
++ +.+.+.. .++ ++.+|. |.|+|..
T Consensus 89 --------~~~~~~~~v~~~~~~-~~~~d~lvlAtG~~ 117 (315)
T 3r9u_A 89 --------KNSDGSFTIKLEGGK-TELAKAVIVCTGSA 117 (315)
T ss_dssp --------ECTTSCEEEEETTSC-EEEEEEEEECCCEE
T ss_pred --------cCCCCcEEEEEecCC-EEEeCEEEEeeCCC
Confidence 22 4466422 234 899999 9999974
No 122
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=98.60 E-value=9.8e-07 Score=91.33 Aligned_cols=40 Identities=28% Similarity=0.437 Sum_probs=34.3
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCc-EEEEEcCCCCCCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNPALGKS 97 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~-~V~viE~~~~~~~~ 97 (514)
..+||+|||||++|+++|+.|++. |+ +|+|+|+++.++..
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~----g~~~v~~~e~~~~~gg~ 43 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEA----GITDLLILEATDHIGGR 43 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHT----TCCCEEEECSSSSSBTT
T ss_pred CCCeEEEECCCHHHHHHHHHHHhc----CCCceEEEeCCCCCCCc
Confidence 457999999999999999999996 88 89999999876543
No 123
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.58 E-value=2e-07 Score=97.26 Aligned_cols=67 Identities=13% Similarity=0.095 Sum_probs=48.7
Q ss_pred EEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCccccccccCCeeEEEeCCC-----cEEEeeE-E
Q 010225 167 VVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDG-----TSLYAKL-V 240 (514)
Q Consensus 167 ~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-----~~~~ad~-V 240 (514)
...|.++.++|...+++.+ ..|+++++|++++..+.+. .. ...+.++|+..++ .++.|+. |
T Consensus 141 ~p~r~E~~~Yl~~~A~~~~-~~vrf~~~V~~v~~~~~~~-------~~-----~~~~~~~V~~~~~~~g~~~~~~ar~vV 207 (501)
T 4b63_A 141 LPARLEFEDYMRWCAQQFS-DVVAYGEEVVEVIPGKSDP-------SS-----SVVDFFTVRSRNVETGEISARRTRKVV 207 (501)
T ss_dssp CCBHHHHHHHHHHHHHTTG-GGEEESEEEEEEEEECSST-------TS-----SCBCEEEEEEEETTTCCEEEEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHcC-CceEcceEEEeeccccccc-------cc-----cccceEEEEEecCCCceEEEEEeCEEE
Confidence 3579999999999999887 7899999999998721100 00 0224577776554 2689999 9
Q ss_pred EecCCC
Q 010225 241 GADGGK 246 (514)
Q Consensus 241 ~AdG~~ 246 (514)
.|+|..
T Consensus 208 latG~~ 213 (501)
T 4b63_A 208 IAIGGT 213 (501)
T ss_dssp ECCCCE
T ss_pred ECcCCC
Confidence 999954
No 124
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.56 E-value=2.3e-07 Score=99.43 Aligned_cols=39 Identities=23% Similarity=0.373 Sum_probs=34.0
Q ss_pred CCccEEEECCCHHHHHHHHHhccC-----CCCCCcEEEEEcCCCCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASM-----PLTKHLSVAIIDSNPALG 95 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~-----~~~~g~~V~viE~~~~~~ 95 (514)
.++||||||||++||++|+.|++. + |.+|+||||....+
T Consensus 21 ~~~DVvVVG~G~AGL~AAl~aa~~~~~~~p---G~~V~vleK~~~~~ 64 (662)
T 3gyx_A 21 HSVDLLMVGGGMGNCGAAFEAVRWADKYAP---EAKILLVDKASLER 64 (662)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHHCT---TCCEEEECSSCTTT
T ss_pred EEcCEEEECCCHHHHHHHHHHHhhccccCC---CCcEEEEEecCCCC
Confidence 468999999999999999999983 1 79999999987654
No 125
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.53 E-value=5e-08 Score=99.37 Aligned_cols=38 Identities=29% Similarity=0.484 Sum_probs=33.7
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCcE--EEEEcCCCCC
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLS--VAIIDSNPAL 94 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~--V~viE~~~~~ 94 (514)
.+.+||+|||||++|+++|..|++. |++ |+|||+.+..
T Consensus 7 ~~~~~vvIIGaG~aGl~aA~~L~~~----g~~~~V~lie~~~~~ 46 (415)
T 3lxd_A 7 AERADVVIVGAGHGGAQAAIALRQN----GFEGRVLVIGREPEI 46 (415)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHT----TCCSCEEEEESSSSC
T ss_pred CCCCcEEEECChHHHHHHHHHHHcc----CcCCCEEEEecCCCC
Confidence 3568999999999999999999996 776 9999998854
No 126
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.48 E-value=2.4e-07 Score=97.18 Aligned_cols=59 Identities=14% Similarity=0.086 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCccccccccCCe---eEEEeCCCc-EEEeeE-EEecCC
Q 010225 171 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHL---AKLDLSDGT-SLYAKL-VGADGG 245 (514)
Q Consensus 171 ~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~g~-~~~ad~-V~AdG~ 245 (514)
..+.+.|.+.+++.| ++++++++|++++.. .++. +.|.+.+|+ ++.||. |.|.|.
T Consensus 255 ~~~~~~l~~~l~~~G-V~i~~~~~V~~i~~~-------------------~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~ 314 (523)
T 1mo9_A 255 NETRAYVLDRMKEQG-MEIISGSNVTRIEED-------------------ANGRVQAVVAMTPNGEMRIETDFVFLGLGE 314 (523)
T ss_dssp HHHHHHHHHHHHHTT-CEEESSCEEEEEEEC-------------------TTSBEEEEEEEETTEEEEEECSCEEECCCC
T ss_pred HHHHHHHHHHHHhCC-cEEEECCEEEEEEEc-------------------CCCceEEEEEEECCCcEEEEcCEEEECcCC
Confidence 456778888888887 999999999999750 1122 678888887 899999 999998
Q ss_pred Cchh
Q 010225 246 KSRV 249 (514)
Q Consensus 246 ~S~v 249 (514)
.+..
T Consensus 315 ~p~~ 318 (523)
T 1mo9_A 315 QPRS 318 (523)
T ss_dssp EECC
T ss_pred ccCC
Confidence 8765
No 127
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.47 E-value=2.9e-07 Score=92.60 Aligned_cols=37 Identities=19% Similarity=0.315 Sum_probs=32.9
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
++.+|+|||||+||+++|..|.+. +.+|+|||+.+..
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~----~~~itlie~~~~~ 44 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGK----CDDITMINSEKYL 44 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTT----CSCEEEECSSSSC
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCC----CCEEEEEECCCCC
Confidence 467899999999999999999664 8999999999865
No 128
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.47 E-value=1.5e-07 Score=96.93 Aligned_cols=37 Identities=14% Similarity=0.381 Sum_probs=33.0
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
+||+|||||++|+++|+.|++.. .|++|+|||+++..
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~--~g~~V~vie~~~~~ 39 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKY--PQAEISLIDKQATV 39 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC--SSSEEEEECSSSCC
T ss_pred CCEEEECCCHHHHHHHHHHHhhC--cCCcEEEEECCCCC
Confidence 59999999999999999999852 38999999999865
No 129
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.46 E-value=2.2e-07 Score=97.39 Aligned_cols=39 Identities=28% Similarity=0.417 Sum_probs=34.7
Q ss_pred CCCCCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 50 TNNDDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 50 ~~~~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
+++..+|||+||||||+|+++|+.|++. |++|+|||+++
T Consensus 27 ~~~~~~~DVvVIGgGpaGl~aA~~la~~----G~~V~liEk~~ 65 (519)
T 3qfa_A 27 LPKSYDYDLIIIGGGSGGLAAAKEAAQY----GKKVMVLDFVT 65 (519)
T ss_dssp CCSSCSEEEEEECCSHHHHHHHHHHHHT----TCCEEEECCCC
T ss_pred cCcCCCCCEEEECCCHHHHHHHHHHHhC----CCeEEEEeccC
Confidence 3345679999999999999999999997 99999999975
No 130
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.46 E-value=1.3e-06 Score=89.43 Aligned_cols=57 Identities=9% Similarity=0.107 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCccccccccCCeeEEEeCCCcEEEeeE-EEecCCC
Q 010225 171 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGK 246 (514)
Q Consensus 171 ~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~ 246 (514)
..+.+.|.+.+++.| ++|+++++|++|.. + +++..+.|.+.+|+++.||. |.+.|..
T Consensus 256 ~~L~~aL~r~~~~~G-g~i~l~t~V~~I~~---------d---------~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAING-GTFMLNKNVVDFVF---------D---------DDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC---CEESSCCEEEEEE---------C---------TTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcC-CEEEeCCeEEEEEE---------e---------cCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 567788888888888 89999999999976 1 12345678888998999999 9999876
No 131
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.46 E-value=3.6e-07 Score=94.67 Aligned_cols=38 Identities=29% Similarity=0.375 Sum_probs=34.3
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
+.++||+||||||+|+++|+.|++. |++|+|||+++.+
T Consensus 4 ~~~~dvvIIGgG~aGl~aA~~l~~~----g~~V~liE~~~~~ 41 (474)
T 1zmd_A 4 PIDADVTVIGSGPGGYVAAIKAAQL----GFKTVCIEKNETL 41 (474)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHT----TCCEEEEECSSSS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhC----CCeEEEEeCCCCc
Confidence 3468999999999999999999996 9999999998755
No 132
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.46 E-value=2.8e-07 Score=94.96 Aligned_cols=33 Identities=27% Similarity=0.386 Sum_probs=31.4
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSN 91 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~ 91 (514)
++||+|||||++|+++|..|++. |++|+|||+.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~----g~~V~lie~~ 35 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQL----GQKVTIVEKG 35 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHT----TCCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHhC----CCeEEEEECC
Confidence 58999999999999999999996 9999999998
No 133
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.44 E-value=1.3e-07 Score=95.90 Aligned_cols=37 Identities=14% Similarity=0.314 Sum_probs=32.8
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCc--EEEEEcCCCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHL--SVAIIDSNPAL 94 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~--~V~viE~~~~~ 94 (514)
+++||+|||||++|+++|..|++. |+ +|+|||+.+..
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~----g~~~~V~lie~~~~~ 44 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQA----GYQGLITVVGDEAER 44 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHH----TCCSCEEEEESSCSC
T ss_pred CCCcEEEECChHHHHHHHHHHHcc----CCCCeEEEEECCCCC
Confidence 468999999999999999999996 66 59999998754
No 134
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.43 E-value=4.3e-07 Score=93.41 Aligned_cols=38 Identities=21% Similarity=0.448 Sum_probs=33.3
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
.+||+|||||++|+++|+.|++.+ .|++|+|||+.+..
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~--~~~~V~vie~~~~~ 40 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLK--PEWDVKVFEATEWV 40 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHC--TTSEEEEECSSSCC
T ss_pred cCcEEEECCcHHHHHHHHHHHHhC--cCCCEEEEECCCcc
Confidence 479999999999999999999852 37899999998855
No 135
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.42 E-value=4.6e-07 Score=94.32 Aligned_cols=38 Identities=26% Similarity=0.439 Sum_probs=32.9
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
++++||+||||||+|+++|+.|++. |++|+|||+++.+
T Consensus 23 m~~~dVvVIGgG~aGl~aA~~la~~----G~~V~liEk~~~~ 60 (491)
T 3urh_A 23 MMAYDLIVIGSGPGGYVCAIKAAQL----GMKVAVVEKRSTY 60 (491)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHT----TCCEEEEESSSSS
T ss_pred cccCCEEEECCCHHHHHHHHHHHHC----CCeEEEEecCCCC
Confidence 4569999999999999999999996 9999999998755
No 136
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.41 E-value=4.4e-07 Score=92.97 Aligned_cols=34 Identities=26% Similarity=0.392 Sum_probs=31.6
Q ss_pred ccEEEECCCHHHHHHHHHhcc---CCCCCCcEEEEEcCCCC
Q 010225 56 YDVAVVGGGMVGMALACSLAS---MPLTKHLSVAIIDSNPA 93 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~---~~~~~g~~V~viE~~~~ 93 (514)
.||+|||||++|+++|+.|++ . |++|+|||+++.
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~----g~~Vtlie~~~~ 41 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGS----GHEVTLISANDY 41 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGG----GSEEEEECSSSE
T ss_pred CcEEEECCcHHHHHHHHHHhccCCC----cCEEEEEeCCCC
Confidence 689999999999999999998 5 899999999884
No 137
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.41 E-value=4.2e-07 Score=94.14 Aligned_cols=38 Identities=24% Similarity=0.418 Sum_probs=31.0
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
++||+|||||++|+++|+.|++.. .|++|+|||+++..
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~--~g~~Vtvie~~~~~ 40 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLD--PEAHVTMIDQASRI 40 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHC--TTSEEEEECCC---
T ss_pred CCcEEEECCCHHHHHHHHHHHhhC--cCCCEEEEECCCcc
Confidence 469999999999999999999842 38999999999865
No 138
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.40 E-value=5.7e-07 Score=92.99 Aligned_cols=36 Identities=33% Similarity=0.554 Sum_probs=33.4
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
++||+|||||++|+++|+.|++. |++|+|||+++.+
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~----g~~V~lie~~~~~ 37 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQL----GMKTACVEKRGAL 37 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT----TCCEEEEESSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHC----CCeEEEEeCCCCc
Confidence 58999999999999999999996 9999999998755
No 139
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.40 E-value=4.1e-07 Score=89.31 Aligned_cols=69 Identities=25% Similarity=0.305 Sum_probs=46.4
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCC
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGA 126 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl 126 (514)
..++||+||||||+||++|+.|++.. .|++|+||||.+.++..-++. ........+......+++++|+
T Consensus 63 ~~~~DV~IIGaGPAGlsAA~~la~~r--~G~~V~viEk~~~~GG~~~~~---~~~~~~~~l~~~~~~~~~e~Gv 131 (326)
T 3fpz_A 63 FAVSDVIIVGAGSSGLSAAYVIAKNR--PDLKVCIIESSVAPGGGSWLG---GQLFSAMVMRKPAHLFLQELEI 131 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHHHC--TTSCEEEECSSSSCCTTTTCC---STTCCCEEEETTTHHHHHHTTC
T ss_pred ccCCCEEEECCCHHHHHHHHHHHHhC--CCCeEEEEECCCCCCceEEeC---CccCCHHHHHHHHHHHHHHcCC
Confidence 35689999999999999999997420 299999999998775332211 1111223455555666666654
No 140
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.38 E-value=4e-07 Score=93.83 Aligned_cols=36 Identities=31% Similarity=0.540 Sum_probs=33.0
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
++||+||||||+|+++|+.|++. |++|+|||+++.+
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~----g~~V~lie~~~~~ 36 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQL----GMKVGVVEKEKAL 36 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT----TCCEEEEESSSSS
T ss_pred CCCEEEECCChhHHHHHHHHHHC----CCeEEEEeCCCCC
Confidence 37999999999999999999996 9999999998655
No 141
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.38 E-value=5.5e-07 Score=93.65 Aligned_cols=37 Identities=19% Similarity=0.257 Sum_probs=33.4
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCC---cEEEEEcCCCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKH---LSVAIIDSNPAL 94 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g---~~V~viE~~~~~ 94 (514)
+++||+|||||++|+++|..|++. | .+|+|||+++..
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~----g~~~~~V~lie~~~~~ 73 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTN----YGDANEIVVFDQNSNI 73 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH----HGGGSEEEEECSSSCC
T ss_pred cCCcEEEECCCHHHHHHHHHHHhc----CCCCCeEEEEECCCCC
Confidence 458999999999999999999996 6 999999998754
No 142
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.37 E-value=6.4e-07 Score=91.57 Aligned_cols=38 Identities=32% Similarity=0.588 Sum_probs=32.7
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
..||+|||||++|+++|+.|++.+ .|++|+|||+++..
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~--~g~~Vtlie~~~~~ 39 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLM--PDLKITLISDRPYF 39 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHC--TTCEEEEECSSSEE
T ss_pred CCCEEEECccHHHHHHHHHHHcCC--CCCeEEEECCCCCC
Confidence 368999999999999999999921 28999999998854
No 143
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.37 E-value=1.2e-06 Score=88.08 Aligned_cols=100 Identities=21% Similarity=0.306 Sum_probs=80.6
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhhh
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (514)
..+|+|||||+.|+.+|..|++. |.+|+|+|+.+.+. .
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~----g~~Vtlv~~~~~~~----------~---------------------------- 182 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSG----GYQLDVVAPCEQVM----------P---------------------------- 182 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT----TCEEEEEESSSSSS----------T----------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhC----CCeEEEEecCcchh----------h----------------------------
Confidence 46899999999999999999996 99999999987541 0
Q ss_pred ccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCc
Q 010225 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (514)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~ 214 (514)
. .....+.+.|.+.+++.| ++++++++|++++.
T Consensus 183 -------------~-------------------~~~~~~~~~l~~~l~~~g-v~i~~~~~v~~i~~-------------- 215 (384)
T 2v3a_A 183 -------------G-------------------LLHPAAAKAVQAGLEGLG-VRFHLGPVLASLKK-------------- 215 (384)
T ss_dssp -------------T-------------------TSCHHHHHHHHHHHHTTT-CEEEESCCEEEEEE--------------
T ss_pred -------------c-------------------ccCHHHHHHHHHHHHHcC-CEEEeCCEEEEEEe--------------
Confidence 0 001335567777777777 99999999999976
Q ss_pred cccccccCCeeEEEeCCCcEEEeeE-EEecCCCchh
Q 010225 215 ATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKSRV 249 (514)
Q Consensus 215 ~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S~v 249 (514)
.++.+.|.+.+|+++.||. |.|.|..+..
T Consensus 216 ------~~~~~~v~~~~g~~i~~d~vv~a~G~~p~~ 245 (384)
T 2v3a_A 216 ------AGEGLEAHLSDGEVIPCDLVVSAVGLRPRT 245 (384)
T ss_dssp ------ETTEEEEEETTSCEEEESEEEECSCEEECC
T ss_pred ------cCCEEEEEECCCCEEECCEEEECcCCCcCH
Confidence 3356788888999999999 9999987765
No 144
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.35 E-value=7.7e-07 Score=88.92 Aligned_cols=35 Identities=34% Similarity=0.500 Sum_probs=31.3
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
.-||+||||||+|+++|..|++. | +|+|||+++..
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~----g-~V~lie~~~~~ 42 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQT----Y-EVTVIDKEPVP 42 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTT----S-EEEEECSSSSC
T ss_pred CCcEEEECCcHHHHHHHHHHhhc----C-CEEEEECCCCC
Confidence 46999999999999999999996 8 99999998754
No 145
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.34 E-value=2.2e-07 Score=94.18 Aligned_cols=35 Identities=29% Similarity=0.489 Sum_probs=31.9
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCc--EEEEEcCCCCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHL--SVAIIDSNPAL 94 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~--~V~viE~~~~~ 94 (514)
.||+|||||++|+++|..|++. |+ +|+|||+.+..
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~----g~~~~V~lie~~~~~ 38 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQA----KYPGRIALINDEKHL 38 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT----TCCSCEEEECCSSSS
T ss_pred CCEEEEcChHHHHHHHHHHHhh----CcCCCEEEEeCCCCC
Confidence 5899999999999999999996 77 89999998854
No 146
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.34 E-value=1.4e-07 Score=97.94 Aligned_cols=38 Identities=16% Similarity=0.371 Sum_probs=32.5
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
.+||+|||||++|+++|+.|++.+ +|.+|+|||+.+..
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~--~g~~V~lie~~~~~ 73 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRND--ENANVVTLEKGEIY 73 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHC--TTCEEEEECSSSCC
T ss_pred cceEEEECCCHHHHHHHHHHHhhC--cCCcEEEEECCCCC
Confidence 369999999999999999999842 38999999998754
No 147
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.33 E-value=2.8e-06 Score=87.46 Aligned_cols=99 Identities=18% Similarity=0.268 Sum_probs=78.0
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhhh
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (514)
..+|+|||||++|+.+|..|++. |.+|+|+|+.+.+. +. .
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~----g~~V~lv~~~~~~l----------~~-----~--------------------- 206 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRL----GAEVIVLEYMDRIL----------PT-----M--------------------- 206 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSSSSC----------TT-----S---------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc----CCEEEEEecCCccc----------cc-----c---------------------
Confidence 46899999999999999999996 99999999987541 00 0
Q ss_pred ccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCc
Q 010225 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (514)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~ 214 (514)
...+.+.|.+.+++.| ++++++++|++++.
T Consensus 207 -----------------------------------~~~~~~~l~~~l~~~G-v~i~~~~~V~~i~~-------------- 236 (455)
T 2yqu_A 207 -----------------------------------DLEVSRAAERVFKKQG-LTIRTGVRVTAVVP-------------- 236 (455)
T ss_dssp -----------------------------------CHHHHHHHHHHHHHHT-CEEECSCCEEEEEE--------------
T ss_pred -----------------------------------CHHHHHHHHHHHHHCC-CEEEECCEEEEEEE--------------
Confidence 0134455566666666 99999999999976
Q ss_pred cccccccCCeeEEEeCCCcEEEeeE-EEecCCCchh
Q 010225 215 ATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKSRV 249 (514)
Q Consensus 215 ~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S~v 249 (514)
.++.+.+.+.+|+++.+|. |.|+|..+..
T Consensus 237 ------~~~~v~v~~~~g~~i~~D~vv~A~G~~p~~ 266 (455)
T 2yqu_A 237 ------EAKGARVELEGGEVLEADRVLVAVGRRPYT 266 (455)
T ss_dssp ------ETTEEEEEETTSCEEEESEEEECSCEEECC
T ss_pred ------eCCEEEEEECCCeEEEcCEEEECcCCCcCC
Confidence 3356778888888999999 9999988765
No 148
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.33 E-value=8e-07 Score=90.22 Aligned_cols=35 Identities=29% Similarity=0.549 Sum_probs=31.6
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCcE--EEEEcCCCCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHLS--VAIIDSNPAL 94 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~~--V~viE~~~~~ 94 (514)
.+|+|||||++|+++|..|++. |++ |+|||+.+..
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~----g~~~~V~li~~~~~~ 39 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAE----GFEGRISLIGDEPHL 39 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT----TCCSEEEEEECSSSS
T ss_pred CCEEEEcccHHHHHHHHHHHcc----CcCCeEEEEECCCCC
Confidence 4899999999999999999996 766 9999998854
No 149
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.33 E-value=1.7e-07 Score=95.14 Aligned_cols=35 Identities=23% Similarity=0.311 Sum_probs=31.8
Q ss_pred ccEEEECCCHHHHHHHHHhcc---CCCCCCcEEEEEcCCCCC
Q 010225 56 YDVAVVGGGMVGMALACSLAS---MPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~---~~~~~g~~V~viE~~~~~ 94 (514)
.||+|||||++|+++|+.|++ . |++|+|||+++..
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~----g~~V~vie~~~~~ 39 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGS----KADVKVINKSRFS 39 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGG----GSEEEEEESSSEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCC----CCeEEEEeCCCCc
Confidence 479999999999999999998 6 8999999998843
No 150
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.32 E-value=1.1e-06 Score=90.80 Aligned_cols=34 Identities=32% Similarity=0.415 Sum_probs=31.8
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSN 91 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~ 91 (514)
.++||+||||||+|+++|+.|++. |++|+|||+.
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~----G~~V~liEk~ 37 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAAL----GKKVAIAEEF 37 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTT----TCCEEEEESS
T ss_pred CCCcEEEECcCHHHHHHHHHHHhC----CCEEEEEeCC
Confidence 469999999999999999999996 9999999993
No 151
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.30 E-value=6.8e-07 Score=92.61 Aligned_cols=37 Identities=30% Similarity=0.455 Sum_probs=34.1
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
++|||+||||||+|+++|+.|++. |++|+|||+++.+
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~----G~~V~liEk~~~~ 38 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQL----GLKTALIEKYKGK 38 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHH----TCCEEEEECCBCT
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC----CCEEEEEeCCCcc
Confidence 469999999999999999999996 9999999998754
No 152
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.29 E-value=1.7e-07 Score=96.59 Aligned_cols=37 Identities=19% Similarity=0.141 Sum_probs=32.4
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
+||+|||||++|+++|..|++.. .|++|+|||+++..
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~--~g~~V~lie~~~~~ 37 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADH--PDADVTAYEMNDNI 37 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC--TTCEEEEEESSSCC
T ss_pred CeEEEECCCHHHHHHHHHHHhhC--cCCcEEEEECCCCC
Confidence 58999999999999999999842 38999999998754
No 153
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.28 E-value=2.3e-07 Score=96.25 Aligned_cols=37 Identities=32% Similarity=0.486 Sum_probs=33.3
Q ss_pred CCCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 52 NDDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 52 ~~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
++..+||+||||||+|+++|+.|++. |++|+|||++.
T Consensus 17 ~~~~~dVvIIGgG~aGl~aA~~la~~----G~~V~liE~~~ 53 (478)
T 3dk9_A 17 AVASYDYLVIGGGSGGLASARRAAEL----GARAAVVESHK 53 (478)
T ss_dssp CEEECSEEEECCSHHHHHHHHHHHHT----TCCEEEEESSC
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhC----CCeEEEEecCC
Confidence 34569999999999999999999996 99999999764
No 154
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.28 E-value=6.9e-07 Score=92.88 Aligned_cols=36 Identities=33% Similarity=0.493 Sum_probs=32.7
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
..+|||+||||||+|+++|+.|++. |++|+||||.+
T Consensus 4 ~~~~DvvVIG~G~aGl~aA~~la~~----G~~V~liEk~~ 39 (488)
T 3dgz_A 4 QQSFDLLVIGGGSGGLACAKEAAQL----GKKVAVADYVE 39 (488)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHT----TCCEEEECCCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhC----CCeEEEEEecc
Confidence 3569999999999999999999997 99999999854
No 155
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.28 E-value=1e-06 Score=91.11 Aligned_cols=35 Identities=29% Similarity=0.362 Sum_probs=32.5
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
.++||+|||||++|+++|+.|++. |++|+|||++.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~----g~~V~lie~~~ 37 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQ----GAQVTLIERGT 37 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT----TCEEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC----CCEEEEEeCCC
Confidence 468999999999999999999996 99999999983
No 156
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.27 E-value=3.1e-06 Score=87.33 Aligned_cols=100 Identities=19% Similarity=0.273 Sum_probs=77.9
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhhh
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (514)
..+|+|||||++|+-+|..|++. |.+|+|+|+.+.+. ..
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~----g~~Vtlv~~~~~~l----------~~--------------------------- 207 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRL----GAEVTLIEYMPEIL----------PQ--------------------------- 207 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSSSSS----------TT---------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHC----CCeEEEEEcCCccc----------cc---------------------------
Confidence 36899999999999999999996 99999999987541 00
Q ss_pred ccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCc
Q 010225 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (514)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~ 214 (514)
....+.+.|.+.+++.| ++++++++|++++.
T Consensus 208 ----------------------------------~~~~~~~~l~~~l~~~g-V~i~~~~~v~~i~~-------------- 238 (464)
T 2eq6_A 208 ----------------------------------GDPETAALLRRALEKEG-IRVRTKTKAVGYEK-------------- 238 (464)
T ss_dssp ----------------------------------SCHHHHHHHHHHHHHTT-CEEECSEEEEEEEE--------------
T ss_pred ----------------------------------cCHHHHHHHHHHHHhcC-CEEEcCCEEEEEEE--------------
Confidence 01234566677777777 99999999999976
Q ss_pred cccccccCCeeEEEeC-C--Cc--EEEeeE-EEecCCCchhh
Q 010225 215 ATTLFTKGHLAKLDLS-D--GT--SLYAKL-VGADGGKSRVR 250 (514)
Q Consensus 215 ~~~~~~~~~~~~v~~~-~--g~--~~~ad~-V~AdG~~S~vR 250 (514)
.++.+.+.+. + |+ ++.||+ |.|.|..+.+.
T Consensus 239 ------~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~ 274 (464)
T 2eq6_A 239 ------KKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTE 274 (464)
T ss_dssp ------ETTEEEEEEEETTCCSCEEEEESEEEECSCEEESCT
T ss_pred ------eCCEEEEEEeecCCCceeEEEcCEEEECCCcccCCC
Confidence 3345667765 6 76 799999 99999876653
No 157
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.27 E-value=1.1e-06 Score=93.47 Aligned_cols=40 Identities=18% Similarity=0.304 Sum_probs=34.7
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
++..||+|||||++|+++|+.|++.+ .|++|+|||+++..
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~~--~g~~V~vie~~~~~ 73 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRLS--EEDEIIMVERGEYI 73 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHC--SSSEEEEECSSSCS
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhhC--cCCCEEEEECCCCc
Confidence 44679999999999999999999852 37999999999865
No 158
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.26 E-value=6.3e-07 Score=91.57 Aligned_cols=36 Identities=33% Similarity=0.604 Sum_probs=31.1
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~ 93 (514)
.+|||||||++|+++|..|++.+ .+++|+|||+++.
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~--~~~~VtlI~~~~~ 38 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLM--PDLKITLISDRPY 38 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHC--TTCEEEEECSSSE
T ss_pred CcEEEECCCHHHHHHHHHHhccC--cCCeEEEEcCCCC
Confidence 47999999999999999999852 3589999999873
No 159
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.25 E-value=1.4e-06 Score=94.56 Aligned_cols=40 Identities=28% Similarity=0.428 Sum_probs=35.7
Q ss_pred CCCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCC
Q 010225 52 NDDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALG 95 (514)
Q Consensus 52 ~~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~ 95 (514)
...++||+||||||+|+++|+.|++. |++|+|||+++..+
T Consensus 388 ~~~~~~VvIIGgG~AGl~aA~~La~~----G~~V~liE~~~~~G 427 (690)
T 3k30_A 388 KESDARVLVVGAGPSGLEAARALGVR----GYDVVLAEAGRDLG 427 (690)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHHH----TCEEEEECSSSSSC
T ss_pred ccccceEEEECCCHHHHHHHHHHHHC----CCeEEEEecCCCCC
Confidence 44578999999999999999999996 99999999987653
No 160
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.25 E-value=3.1e-07 Score=94.43 Aligned_cols=37 Identities=14% Similarity=0.191 Sum_probs=32.4
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
+||+|||||++|+++|..|++.. +|.+|+|||+++..
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~--~g~~V~lie~~~~~ 37 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLH--PDAEIQWYEKGDFI 37 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHC--TTSEEEEEESSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhC--cCCeEEEEECCCcc
Confidence 48999999999999999999842 38999999998754
No 161
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.25 E-value=3.8e-07 Score=95.34 Aligned_cols=41 Identities=34% Similarity=0.401 Sum_probs=36.4
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKS 97 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~ 97 (514)
+.+||||||||++||++|+.|+++ .|++|+|+|+++.++..
T Consensus 9 ~~~DVvIIGaGisGLsaA~~L~k~---~G~~V~VlE~~~~~GG~ 49 (513)
T 4gde_A 9 ISVDVLVIGAGPTGLGAAKRLNQI---DGPSWMIVDSNETPGGL 49 (513)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHH---CCSCEEEEESSSSCCGG
T ss_pred CCCCEEEECCcHHHHHHHHHHHhh---CCCCEEEEECCCCCcCC
Confidence 468999999999999999999874 39999999999988643
No 162
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.24 E-value=1.8e-06 Score=89.97 Aligned_cols=36 Identities=25% Similarity=0.387 Sum_probs=32.1
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCC-CcEEEEEcCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTK-HLSVAIIDSNP 92 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~-g~~V~viE~~~ 92 (514)
++||+|||||++|+++|+.|++.. + |++|+|||+++
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~--~~G~~V~liE~~~ 38 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSH--PETTQVTVIDCDG 38 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHC--TTTEEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCC--CCcCEEEEEeCCC
Confidence 589999999999999999999941 1 89999999987
No 163
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.23 E-value=3.1e-06 Score=87.32 Aligned_cols=35 Identities=34% Similarity=0.602 Sum_probs=32.5
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
.++||+|||||++|+++|..|++. |++|+|||++.
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~----g~~V~liE~~~ 37 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAF----GKRVALIESKA 37 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT----TCCEEEEESSC
T ss_pred ccCcEEEECCCHHHHHHHHHHHhC----CCcEEEEcCCC
Confidence 468999999999999999999996 99999999974
No 164
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.23 E-value=3e-06 Score=87.12 Aligned_cols=100 Identities=19% Similarity=0.230 Sum_probs=76.9
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhhh
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (514)
..+|+|||||+.|+-+|..|++. |.+|+|+|+.+.+. . .+.
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~----g~~Vtlv~~~~~~l----------~-----~~~-------------------- 207 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGL----GAKTHLFEMFDAPL----------P-----SFD-------------------- 207 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSSSSS----------T-----TSC--------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhc----CCEEEEEEeCCchh----------h-----hhh--------------------
Confidence 45899999999999999999996 99999999887440 0 000
Q ss_pred ccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCc
Q 010225 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (514)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~ 214 (514)
..+.+.|.+.+++.| ++++++++|++++.
T Consensus 208 ------------------------------------~~~~~~l~~~l~~~G-v~i~~~~~v~~i~~-------------- 236 (450)
T 1ges_A 208 ------------------------------------PMISETLVEVMNAEG-PQLHTNAIPKAVVK-------------- 236 (450)
T ss_dssp ------------------------------------HHHHHHHHHHHHHHS-CEEECSCCEEEEEE--------------
T ss_pred ------------------------------------HHHHHHHHHHHHHCC-CEEEeCCEEEEEEE--------------
Confidence 013445566666667 99999999999976
Q ss_pred cccccccCCeeEEEeCCCcEEEeeE-EEecCCCchh
Q 010225 215 ATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKSRV 249 (514)
Q Consensus 215 ~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S~v 249 (514)
++++.+.|.+.+|+++.||. |.|+|..+.+
T Consensus 237 -----~~~~~~~v~~~~g~~i~~D~vv~a~G~~p~~ 267 (450)
T 1ges_A 237 -----NTDGSLTLELEDGRSETVDCLIWAIGREPAN 267 (450)
T ss_dssp -----CTTSCEEEEETTSCEEEESEEEECSCEEESC
T ss_pred -----eCCcEEEEEECCCcEEEcCEEEECCCCCcCC
Confidence 11234778888998999999 9999987765
No 165
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.22 E-value=1.9e-05 Score=82.62 Aligned_cols=58 Identities=14% Similarity=-0.005 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCccccccccCCeeEEEeCCCcEEEeeE-EEecCCCchh
Q 010225 171 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKSRV 249 (514)
Q Consensus 171 ~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S~v 249 (514)
.++...+.+.+++.| ++++.++.+..++. .++.+.|.+.++.++.+|. +.|.|....+
T Consensus 263 ~ei~~~l~~~l~~~g-i~~~~~~~v~~~~~--------------------~~~~~~v~~~~~~~~~~D~vLvAvGR~Pnt 321 (542)
T 4b1b_A 263 QQCAVKVKLYMEEQG-VMFKNGILPKKLTK--------------------MDDKILVEFSDKTSELYDTVLYAIGRKGDI 321 (542)
T ss_dssp HHHHHHHHHHHHHTT-CEEEETCCEEEEEE--------------------ETTEEEEEETTSCEEEESEEEECSCEEESC
T ss_pred hhHHHHHHHHHHhhc-ceeecceEEEEEEe--------------------cCCeEEEEEcCCCeEEEEEEEEcccccCCc
Confidence 456777888888888 99999999999987 5578889999999999999 9999976655
No 166
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.22 E-value=1.8e-06 Score=89.15 Aligned_cols=34 Identities=29% Similarity=0.462 Sum_probs=32.3
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
++||+||||||+|+++|..|++. |++|+|||+++
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~----g~~V~lie~~~ 39 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQL----GLKVLAVEAGE 39 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT----TCCEEEEESSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHC----CCeEEEEeCCC
Confidence 68999999999999999999996 99999999987
No 167
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.21 E-value=2.2e-06 Score=88.96 Aligned_cols=35 Identities=34% Similarity=0.441 Sum_probs=32.2
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCC
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSN 91 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~ 91 (514)
...|||+||||||+|+++|+.|++. |++|+||||.
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~----G~~V~liEk~ 41 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLN----GARVACLDFV 41 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHT----TCCEEEECCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC----CCEEEEEEec
Confidence 4579999999999999999999996 9999999964
No 168
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.21 E-value=1.3e-06 Score=90.59 Aligned_cols=35 Identities=31% Similarity=0.499 Sum_probs=32.6
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
.++||+||||||+|+++|+.|++. |++|+|||++.
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~----g~~V~liE~~~ 44 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASY----GAKTLLVEAKA 44 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT----SCCEEEEESSC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHC----CCcEEEEeCCC
Confidence 468999999999999999999996 99999999974
No 169
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.20 E-value=8.2e-06 Score=80.35 Aligned_cols=114 Identities=12% Similarity=0.140 Sum_probs=67.7
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCC-----CceEEeChhhHH----HHHHcCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPD-----PRVSTVTPATIS----FFKEIGA 126 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~~~----~l~~lgl 126 (514)
+||+|||||++|+.+|+.|++. |++|+|+|+++............... .+|.... ++.- -++.+|-
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~----G~~V~liE~~~~~~tp~h~~d~i~eL~CnpSigG~~~~-~akGlL~~EIdaLGg 76 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRL----GVPVRLFEMRPKRMTPAHGTDRFAEIVCSNSLGGEGET-NAKGLLQAEMRRAGS 76 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT----TCCEEEECCTTTSCCSSCCSSCTTCCCSCCEEEECSTT-CHHHHHHHHHHHHTC
T ss_pred CCEEEECchHHHHHHHHHHHHC----CCcEEEEeccCCcCCccccCCCccccccCcCCCccccc-cchhHHHHHHHHcCC
Confidence 6899999999999999999996 99999999987543222100000111 1111111 1222 2233331
Q ss_pred cHHHHhhhccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEE
Q 010225 127 WQYVQQHRHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSM 198 (514)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v 198 (514)
.+..... ...+ + .-....++|..+...+.+.+++.++++++.+ +|+++
T Consensus 77 --~m~~~aD--~~~i-------------p------Ag~al~vDR~~f~~~~~~~le~~pni~l~q~-eV~~l 124 (443)
T 3g5s_A 77 --LVMEAAD--LARV-------------P------AGGALAVDREEFSGYITERLTGHPLLEVVRE-EVREI 124 (443)
T ss_dssp --HHHHHHH--HSEE-------------C------CTTEEEECHHHHHHHHHHHHHTCTTEEEECS-CCCSC
T ss_pred --hHhhhhh--hcCC-------------C------CCccccCCcHHHHHHHHHHHHcCCCeEEEhh-hhhhh
Confidence 1111000 0000 0 0122469999999999999999999998855 67766
No 170
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.20 E-value=4.8e-06 Score=85.55 Aligned_cols=35 Identities=29% Similarity=0.451 Sum_probs=32.5
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
.++||+|||||++|+++|+.|++. |++|+|||++.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~----g~~V~liE~~~ 37 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMY----GQKCALIEAKE 37 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTT----TCCEEEEESSC
T ss_pred ccCCEEEECCCHHHHHHHHHHHhC----CCeEEEEcCCC
Confidence 468999999999999999999996 99999999974
No 171
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.18 E-value=9.6e-07 Score=88.80 Aligned_cols=35 Identities=17% Similarity=0.436 Sum_probs=30.9
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCC--cEEEEEcCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKH--LSVAIIDSNP 92 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g--~~V~viE~~~ 92 (514)
..+||+|||||++|+++|..|++. | .+|+|+|++.
T Consensus 3 ~~~dvvIIG~G~aGl~aA~~l~~~----g~~~~V~lie~~~ 39 (384)
T 2v3a_A 3 ERAPLVIIGTGLAGYNLAREWRKL----DGETPLLMITADD 39 (384)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHTT----CSSSCEEEECSSC
T ss_pred CCCcEEEECChHHHHHHHHHHHhh----CCCCCEEEEECCC
Confidence 358999999999999999999997 6 5799999876
No 172
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.17 E-value=5.7e-06 Score=85.96 Aligned_cols=33 Identities=36% Similarity=0.545 Sum_probs=30.7
Q ss_pred CCccEEEECCCHHHHHHHHHhcc-CCCCCCcEEEEEcC
Q 010225 54 DQYDVAVVGGGMVGMALACSLAS-MPLTKHLSVAIIDS 90 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~-~~~~~g~~V~viE~ 90 (514)
.++||+||||||+|+++|+.|++ . |++|+|||+
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~----G~~V~liE~ 35 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLH----KKRVAVIDL 35 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHH----CCCEEEEES
T ss_pred ccccEEEECCCHHHHHHHHHHHHHc----CCEEEEEec
Confidence 36899999999999999999999 7 899999994
No 173
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.14 E-value=3.3e-07 Score=95.39 Aligned_cols=40 Identities=25% Similarity=0.412 Sum_probs=33.8
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
+..+||+|||||++|+++|..|++.. .|.+|+|||+.+..
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~--~g~~V~lie~~~~~ 48 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARD--PGARVLIVSEDPEL 48 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHS--TTCEEEEEESSSSC
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcC--CCCeEEEEeCCCCC
Confidence 45689999999999999999887642 37899999998754
No 174
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.13 E-value=5.8e-06 Score=83.49 Aligned_cols=36 Identities=31% Similarity=0.434 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~ 93 (514)
.+|||||||++|+++|..|++.+ .+.+|+|||+++.
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~--~~~~Vtlie~~~~ 38 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLAD--PSIEVTLIEPNET 38 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC--TTSEEEEECSCSS
T ss_pred CEEEEECCcHHHHHHHHHHHhcC--cCCeEEEEeCCCC
Confidence 47999999999999999998863 3579999998874
No 175
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.13 E-value=1.2e-05 Score=82.40 Aligned_cols=100 Identities=22% Similarity=0.246 Sum_probs=76.2
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhh
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQH 133 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~ 133 (514)
...+|+|||||++|+.+|..|++. |.+|+|+|+.+.+. ..
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~----g~~Vtlv~~~~~~l----------~~-------------------------- 187 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKA----GKKVTVIDILDRPL----------GV-------------------------- 187 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHT----TCEEEEEESSSSTT----------TT--------------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC----CCeEEEEecCcccc----------cc--------------------------
Confidence 457999999999999999999996 99999999987541 00
Q ss_pred hccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCC
Q 010225 134 RHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTP 213 (514)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~ 213 (514)
.+ ...+.+.+.+.+++.| ++++++++|++++.
T Consensus 188 ---~~-------------------------------~~~~~~~l~~~l~~~g-v~i~~~~~v~~i~~------------- 219 (447)
T 1nhp_A 188 ---YL-------------------------------DKEFTDVLTEEMEANN-ITIATGETVERYEG------------- 219 (447)
T ss_dssp ---TC-------------------------------CHHHHHHHHHHHHTTT-EEEEESCCEEEEEC-------------
T ss_pred ---cC-------------------------------CHHHHHHHHHHHHhCC-CEEEcCCEEEEEEc-------------
Confidence 00 0245667778888877 99999999999975
Q ss_pred ccccccccCCeeEEEeCCCcEEEeeE-EEecCCCchh
Q 010225 214 SATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKSRV 249 (514)
Q Consensus 214 ~~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S~v 249 (514)
++....+.+ ++.++.||. |.|.|.....
T Consensus 220 -------~~~v~~v~~-~~~~i~~d~vi~a~G~~p~~ 248 (447)
T 1nhp_A 220 -------DGRVQKVVT-DKNAYDADLVVVAVGVRPNT 248 (447)
T ss_dssp -------SSBCCEEEE-SSCEEECSEEEECSCEEESC
T ss_pred -------cCcEEEEEE-CCCEEECCEEEECcCCCCCh
Confidence 222334555 566799999 9999976654
No 176
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.13 E-value=7.4e-06 Score=84.44 Aligned_cols=99 Identities=21% Similarity=0.210 Sum_probs=76.4
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhhh
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (514)
..+|+|||||.+|+-+|..|++. |.+|+|+|+.+.+. . .+.
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~----G~~Vtlv~~~~~~l----------~-----~~~-------------------- 206 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSF----GSEVTVVALEDRLL----------F-----QFD-------------------- 206 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSSSSS----------T-----TSC--------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhc----CCEEEEEEcCCccc----------c-----ccC--------------------
Confidence 35899999999999999999996 99999999887440 0 000
Q ss_pred ccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCc
Q 010225 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (514)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~ 214 (514)
..+.+.+.+.+++.| ++++++++|++++.
T Consensus 207 ------------------------------------~~~~~~l~~~l~~~g-v~i~~~~~v~~i~~-------------- 235 (463)
T 2r9z_A 207 ------------------------------------PLLSATLAENMHAQG-IETHLEFAVAALER-------------- 235 (463)
T ss_dssp ------------------------------------HHHHHHHHHHHHHTT-CEEESSCCEEEEEE--------------
T ss_pred ------------------------------------HHHHHHHHHHHHHCC-CEEEeCCEEEEEEE--------------
Confidence 012234556666667 99999999999975
Q ss_pred cccccccCCeeEEEeCCCc-EEEeeE-EEecCCCchh
Q 010225 215 ATTLFTKGHLAKLDLSDGT-SLYAKL-VGADGGKSRV 249 (514)
Q Consensus 215 ~~~~~~~~~~~~v~~~~g~-~~~ad~-V~AdG~~S~v 249 (514)
.++.+.|.+.+|+ ++.+|. |.|.|..+.+
T Consensus 236 ------~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~ 266 (463)
T 2r9z_A 236 ------DAQGTTLVAQDGTRLEGFDSVIWAVGRAPNT 266 (463)
T ss_dssp ------ETTEEEEEETTCCEEEEESEEEECSCEEESC
T ss_pred ------eCCeEEEEEeCCcEEEEcCEEEECCCCCcCC
Confidence 2344788888998 899999 9999987654
No 177
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.13 E-value=2.6e-06 Score=84.75 Aligned_cols=40 Identities=23% Similarity=0.419 Sum_probs=35.8
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCC-CCCCC
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSN-PALGK 96 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~-~~~~~ 96 (514)
...+||+|||||++||++|+.|++. |++|+|||++ +.++.
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~----G~~V~VlE~~~~~vGG 82 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRA----GHDVTILEANANRVGG 82 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHT----SCEEEEECSCSSCCBT
T ss_pred CCCceEEEECCCHHHHHHHHHHHHC----CCcEEEEeccccccCC
Confidence 4568999999999999999999997 9999999999 76654
No 178
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.10 E-value=1.8e-06 Score=89.76 Aligned_cols=36 Identities=39% Similarity=0.558 Sum_probs=32.6
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
..+||+||||||+|+++|+.|++ . ++|+|||+++.+
T Consensus 107 ~~~dVvIIGgG~aGl~aA~~L~~----~-~~V~vie~~~~~ 142 (493)
T 1y56_A 107 VVVDVAIIGGGPAGIGAALELQQ----Y-LTVALIEERGWL 142 (493)
T ss_dssp EEESCCEECCSHHHHHHHHHHTT----T-CCEEEECTTSSS
T ss_pred ccCCEEEECccHHHHHHHHHHHh----c-CCEEEEeCCCCC
Confidence 35799999999999999999999 5 899999999865
No 179
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.09 E-value=2.3e-06 Score=88.03 Aligned_cols=42 Identities=31% Similarity=0.379 Sum_probs=37.5
Q ss_pred CCCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCC
Q 010225 52 NDDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKS 97 (514)
Q Consensus 52 ~~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~ 97 (514)
++.++||||||||++||++|+.|++. |++|+|+|+++.++..
T Consensus 8 ~~~~~dvvVIGaG~~GL~aA~~La~~----G~~V~vlE~~~~~GG~ 49 (453)
T 2bcg_G 8 IDTDYDVIVLGTGITECILSGLLSVD----GKKVLHIDKQDHYGGE 49 (453)
T ss_dssp CCCBCSEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSSSCGG
T ss_pred ccccCCEEEECcCHHHHHHHHHHHHC----CCeEEEEeCCCCCCcc
Confidence 34578999999999999999999996 9999999999988644
No 180
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.08 E-value=4.2e-06 Score=88.62 Aligned_cols=37 Identities=11% Similarity=0.270 Sum_probs=32.6
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
.||+||||||+|+++|+.|++.+ .|++|+|||+.+..
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~--~~~~V~lie~~~~~ 38 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLS--ETAEIIMFERGEYV 38 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHC--SSSEEEEECSSSCS
T ss_pred CcEEEECCCHHHHHHHHHHHhhC--cCCCEEEEECCCCc
Confidence 48999999999999999999852 37899999999865
No 181
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.05 E-value=3.1e-06 Score=86.11 Aligned_cols=41 Identities=20% Similarity=0.383 Sum_probs=36.4
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCC-cEEEEEcCCCCCCCC
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKH-LSVAIIDSNPALGKS 97 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g-~~V~viE~~~~~~~~ 97 (514)
.+++||+|||||++||++|+.|++. | ++|+|+|+++.++..
T Consensus 4 ~~~~~v~IIGaG~aGl~aA~~L~~~----g~~~v~v~E~~~~~GG~ 45 (424)
T 2b9w_A 4 SKDSRIAIIGAGPAGLAAGMYLEQA----GFHDYTILERTDHVGGK 45 (424)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHT----TCCCEEEECSSSCSSTT
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhC----CCCcEEEEECCCCCCCc
Confidence 3568999999999999999999996 8 899999999877543
No 182
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.03 E-value=7.2e-06 Score=85.26 Aligned_cols=33 Identities=27% Similarity=0.512 Sum_probs=30.9
Q ss_pred CCccEEEECCCHHHHHHHHHhcc-CCCCCCcEEEEEcC
Q 010225 54 DQYDVAVVGGGMVGMALACSLAS-MPLTKHLSVAIIDS 90 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~-~~~~~g~~V~viE~ 90 (514)
.++||+||||||+|+++|+.|++ . |++|+|||+
T Consensus 6 ~~~dvvVIGgG~aGl~aA~~la~~~----G~~V~liE~ 39 (495)
T 2wpf_A 6 KAFDLVVIGAGSGGLEAGWNAATLY----GKRVAVVDV 39 (495)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHH----CCCEEEEES
T ss_pred cccCEEEECCChhHHHHHHHHHHhc----CCeEEEEec
Confidence 46899999999999999999999 8 899999994
No 183
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.02 E-value=2.4e-06 Score=89.41 Aligned_cols=42 Identities=17% Similarity=0.367 Sum_probs=37.2
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCC-cEEEEEcCCCCCCCCC
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKH-LSVAIIDSNPALGKSN 98 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g-~~V~viE~~~~~~~~~ 98 (514)
++.+||+|||||++||++|+.|++. | ++|+|+|+++.++.+.
T Consensus 6 ~~~~~VvIIGaG~aGL~AA~~L~~~----G~~~V~VlEa~~riGGr~ 48 (516)
T 1rsg_A 6 PAKKKVIIIGAGIAGLKAASTLHQN----GIQDCLVLEARDRVGGRL 48 (516)
T ss_dssp CEEEEEEEECCBHHHHHHHHHHHHT----TCCSEEEECSSSSSBTTC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhc----CCCCEEEEeCCCCCCCce
Confidence 3468999999999999999999996 8 9999999999886543
No 184
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.99 E-value=2.9e-05 Score=78.66 Aligned_cols=108 Identities=20% Similarity=0.303 Sum_probs=81.6
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhhh
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (514)
..+|+|||||..|+-+|..|++. |.+|+|+|+.+.+. +.. +
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~----g~~Vtvv~~~~~~l-------------------~~~---~------------- 183 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKL----GLSVTILEAGDELL-------------------VRV---L------------- 183 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSSSSS-------------------HHH---H-------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhC----CCeEEEEecCCccc-------------------hhh---c-------------
Confidence 46899999999999999999996 99999999988550 000 0
Q ss_pred ccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCc
Q 010225 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (514)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~ 214 (514)
...+.+.+.+.+++.| ++++++++|++++.
T Consensus 184 -----------------------------------~~~~~~~l~~~l~~~G-V~i~~~~~v~~i~~-------------- 213 (410)
T 3ef6_A 184 -----------------------------------GRRIGAWLRGLLTELG-VQVELGTGVVGFSG-------------- 213 (410)
T ss_dssp -----------------------------------CHHHHHHHHHHHHHHT-CEEECSCCEEEEEC--------------
T ss_pred -----------------------------------CHHHHHHHHHHHHHCC-CEEEeCCEEEEEec--------------
Confidence 0234556666666667 99999999999975
Q ss_pred cccccccCCeeEEEeCCCcEEEeeE-EEecCCCchh--hhhhCCCc
Q 010225 215 ATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKSRV--RELAGFKT 257 (514)
Q Consensus 215 ~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S~v--R~~l~~~~ 257 (514)
++....|.+.+|+++.||+ |.|.|..... -+.++...
T Consensus 214 ------~~~~~~v~~~dg~~i~aD~Vv~a~G~~p~~~l~~~~gl~~ 253 (410)
T 3ef6_A 214 ------EGQLEQVMASDGRSFVADSALICVGAEPADQLARQAGLAC 253 (410)
T ss_dssp ------SSSCCEEEETTSCEEECSEEEECSCEEECCHHHHHTTCCB
T ss_pred ------cCcEEEEEECCCCEEEcCEEEEeeCCeecHHHHHhCCCcc
Confidence 3345678889999999999 9999986653 34444443
No 185
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.99 E-value=5.7e-06 Score=85.92 Aligned_cols=42 Identities=24% Similarity=0.407 Sum_probs=37.3
Q ss_pred CCCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCC
Q 010225 52 NDDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKS 97 (514)
Q Consensus 52 ~~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~ 97 (514)
.++.+||+|||||++||++|+.|++. |++|+|+|+.+.++..
T Consensus 8 ~~~~~~v~IIGaG~aGl~aA~~L~~~----g~~v~v~E~~~~~GG~ 49 (489)
T 2jae_A 8 VKGSHSVVVLGGGPAGLCSAFELQKA----GYKVTVLEARTRPGGR 49 (489)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSSSSCTT
T ss_pred ccCCCCEEEECCCHHHHHHHHHHHHC----CCCEEEEeccCCCCCc
Confidence 34568999999999999999999996 9999999999887654
No 186
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=97.95 E-value=3.2e-05 Score=78.47 Aligned_cols=101 Identities=16% Similarity=0.252 Sum_probs=78.8
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhhh
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (514)
..+|+|||||..|+-+|..|++. |.+|+++|+.+.+. .
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~----g~~Vtvv~~~~~~l----------~---------------------------- 189 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKF----GVNVTLLEALPRVL----------A---------------------------- 189 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT----TCEEEEEESSSSTT----------T----------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhc----CCeEEEEecCCchh----------h----------------------------
Confidence 46899999999999999999996 99999999987541 0
Q ss_pred ccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCc
Q 010225 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (514)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~ 214 (514)
. .....+.+.+.+.+++.| ++++++++|++++.
T Consensus 190 -------------~-------------------~~~~~~~~~l~~~l~~~G-V~i~~~~~v~~i~~-------------- 222 (415)
T 3lxd_A 190 -------------R-------------------VAGEALSEFYQAEHRAHG-VDLRTGAAMDCIEG-------------- 222 (415)
T ss_dssp -------------T-------------------TSCHHHHHHHHHHHHHTT-CEEEETCCEEEEEE--------------
T ss_pred -------------h-------------------hcCHHHHHHHHHHHHhCC-CEEEECCEEEEEEe--------------
Confidence 0 001335566777777777 99999999999976
Q ss_pred cccccccCCeeEEEeCCCcEEEeeE-EEecCCCchh
Q 010225 215 ATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKSRV 249 (514)
Q Consensus 215 ~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S~v 249 (514)
+.+....|.+.+|+++.||+ |.|.|.....
T Consensus 223 -----~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p~~ 253 (415)
T 3lxd_A 223 -----DGTKVTGVRMQDGSVIPADIVIVGIGIVPCV 253 (415)
T ss_dssp -----SSSBEEEEEESSSCEEECSEEEECSCCEESC
T ss_pred -----cCCcEEEEEeCCCCEEEcCEEEECCCCccCh
Confidence 12234478889999999999 9999987654
No 187
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.94 E-value=2.1e-05 Score=80.78 Aligned_cols=99 Identities=12% Similarity=0.240 Sum_probs=75.4
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhhh
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (514)
..+|+|||||++|+-+|..|++. |.+|+|+|+.+.+. +
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~----g~~Vtlv~~~~~~l----------~---------------------------- 207 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANF----GTKVTILEGAGEIL----------S---------------------------- 207 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT----TCEEEEEESSSSSS----------T----------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc----CCcEEEEEcCCccc----------c----------------------------
Confidence 46899999999999999999996 99999999987540 0
Q ss_pred ccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCc
Q 010225 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (514)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~ 214 (514)
. + ...+...+.+.+++.| ++++++++|++++.
T Consensus 208 --~----------------~---------------~~~~~~~l~~~l~~~g-v~i~~~~~v~~i~~-------------- 239 (455)
T 1ebd_A 208 --G----------------F---------------EKQMAAIIKKRLKKKG-VEVVTNALAKGAEE-------------- 239 (455)
T ss_dssp --T----------------S---------------CHHHHHHHHHHHHHTT-CEEEESEEEEEEEE--------------
T ss_pred --c----------------c---------------CHHHHHHHHHHHHHCC-CEEEeCCEEEEEEE--------------
Confidence 0 0 0134456667777777 99999999999975
Q ss_pred cccccccCCeeEEEeC---CCcEEEeeE-EEecCCCchh
Q 010225 215 ATTLFTKGHLAKLDLS---DGTSLYAKL-VGADGGKSRV 249 (514)
Q Consensus 215 ~~~~~~~~~~~~v~~~---~g~~~~ad~-V~AdG~~S~v 249 (514)
+++.+.+.+. ++.++.+|. |.|.|.....
T Consensus 240 ------~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~ 272 (455)
T 1ebd_A 240 ------REDGVTVTYEANGETKTIDADYVLVTVGRRPNT 272 (455)
T ss_dssp ------ETTEEEEEEEETTEEEEEEESEEEECSCEEESC
T ss_pred ------eCCeEEEEEEeCCceeEEEcCEEEECcCCCccc
Confidence 3344666654 456799999 9999987654
No 188
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.94 E-value=6.2e-06 Score=82.71 Aligned_cols=40 Identities=38% Similarity=0.610 Sum_probs=36.1
Q ss_pred CCCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCC
Q 010225 52 NDDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALG 95 (514)
Q Consensus 52 ~~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~ 95 (514)
....+||+|||||++||++|+.|++. |++|+|+|+++.++
T Consensus 26 ~~~~~dv~IIGaG~aGl~aA~~l~~~----g~~v~v~E~~~~~G 65 (397)
T 3hdq_A 26 ESKGFDYLIVGAGFAGSVLAERLASS----GQRVLIVDRRPHIG 65 (397)
T ss_dssp CCCCEEEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSSSS
T ss_pred cCCCCCEEEECccHHHHHHHHHHHHC----CCceEEEeccCCCC
Confidence 44679999999999999999999996 99999999988765
No 189
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=97.93 E-value=6.5e-05 Score=75.85 Aligned_cols=109 Identities=24% Similarity=0.331 Sum_probs=81.3
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhhh
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (514)
..+|+|||+|..|+-+|..|++. |.+|+++|+.+.+...
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~----g~~Vtvv~~~~~~~~~------------------------------------- 180 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAK----GLEVDVVELAPRVMAR------------------------------------- 180 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSSSTTTT-------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhC----CCEEEEEeCCCcchhh-------------------------------------
Confidence 35799999999999999999996 9999999988744000
Q ss_pred ccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCc
Q 010225 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (514)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~ 214 (514)
. ....+.+.+.+.+++.| ++++++++|++++.
T Consensus 181 ---~------------------------------~~~~~~~~l~~~l~~~G-V~i~~~~~v~~i~~-------------- 212 (404)
T 3fg2_P 181 ---V------------------------------VTPEISSYFHDRHSGAG-IRMHYGVRATEIAA-------------- 212 (404)
T ss_dssp ---T------------------------------SCHHHHHHHHHHHHHTT-CEEECSCCEEEEEE--------------
T ss_pred ---c------------------------------cCHHHHHHHHHHHHhCC-cEEEECCEEEEEEe--------------
Confidence 0 01235566777777777 99999999999976
Q ss_pred cccccccCCeeEEEeCCCcEEEeeE-EEecCCCchh--hhhhCCCc
Q 010225 215 ATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKSRV--RELAGFKT 257 (514)
Q Consensus 215 ~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S~v--R~~l~~~~ 257 (514)
+.+....|.+.+|+++.||+ |.|.|..... -+.++...
T Consensus 213 -----~~~~v~~V~~~dG~~i~aD~Vv~a~G~~p~~~l~~~~gl~~ 253 (404)
T 3fg2_P 213 -----EGDRVTGVVLSDGNTLPCDLVVVGVGVIPNVEIAAAAGLPT 253 (404)
T ss_dssp -----ETTEEEEEEETTSCEEECSEEEECCCEEECCHHHHHTTCCB
T ss_pred -----cCCcEEEEEeCCCCEEEcCEEEECcCCccCHHHHHhCCCCC
Confidence 12234568899999999999 9999976543 34444443
No 190
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.92 E-value=3.3e-05 Score=79.89 Aligned_cols=101 Identities=14% Similarity=0.169 Sum_probs=75.2
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhhh
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (514)
..+|+|||||..|+-+|..|++. |.+|+|+|+.+.+. . .+.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~----g~~Vtlv~~~~~~l----------~-----~~d-------------------- 225 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGL----GSETHLVIRGETVL----------R-----KFD-------------------- 225 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHT----TCEEEEECSSSSSC----------T-----TSC--------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc----CCceEEEEeCCccc----------c-----ccC--------------------
Confidence 46899999999999999999996 99999999987541 0 000
Q ss_pred ccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCc
Q 010225 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (514)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~ 214 (514)
..+.+.+.+.+++.| ++++++++|++++.. +
T Consensus 226 ------------------------------------~~~~~~l~~~l~~~G-v~i~~~~~v~~i~~~-----------~- 256 (479)
T 2hqm_A 226 ------------------------------------ECIQNTITDHYVKEG-INVHKLSKIVKVEKN-----------V- 256 (479)
T ss_dssp ------------------------------------HHHHHHHHHHHHHHT-CEEECSCCEEEEEEC-----------C-
T ss_pred ------------------------------------HHHHHHHHHHHHhCC-eEEEeCCEEEEEEEc-----------C-
Confidence 112234555566666 999999999999750 0
Q ss_pred cccccccCCeeEEEeCCC-cEEEeeE-EEecCCCchh
Q 010225 215 ATTLFTKGHLAKLDLSDG-TSLYAKL-VGADGGKSRV 249 (514)
Q Consensus 215 ~~~~~~~~~~~~v~~~~g-~~~~ad~-V~AdG~~S~v 249 (514)
++..+.|.+.+| +++.||. |.|.|.....
T Consensus 257 ------~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 257 ------ETDKLKIHMNDSKSIDDVDELIWTIGRKSHL 287 (479)
T ss_dssp -------CCCEEEEETTSCEEEEESEEEECSCEEECC
T ss_pred ------CCcEEEEEECCCcEEEEcCEEEECCCCCCcc
Confidence 112377888899 7899999 9999976654
No 191
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.92 E-value=5.7e-06 Score=83.52 Aligned_cols=41 Identities=27% Similarity=0.580 Sum_probs=35.7
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCC
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGK 96 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~ 96 (514)
...+||+|||||++||++|+.|++. .|++|+|+|+++.++.
T Consensus 5 ~~~~~v~IiGaG~~Gl~aA~~L~~~---~g~~v~v~E~~~~~GG 45 (399)
T 1v0j_A 5 TARFDLFVVGSGFFGLTIAERVATQ---LDKRVLVLERRPHIGG 45 (399)
T ss_dssp CCSCSEEEECCSHHHHHHHHHHHHH---SCCCEEEECSSSSSSG
T ss_pred cccCCEEEECCCHHHHHHHHHHHHh---CCCCEEEEeCCCCCCC
Confidence 3478999999999999999999994 2899999999987653
No 192
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.91 E-value=4.6e-05 Score=78.77 Aligned_cols=102 Identities=12% Similarity=0.292 Sum_probs=76.6
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhhh
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (514)
..+|+|||||+.|+-+|..|++. |.+|+|+|+.+.+.. . +.
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~----g~~Vtlv~~~~~~l~---------~------~~-------------------- 223 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRL----GSKVTVVEFQPQIGA---------S------MD-------------------- 223 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSSSSSS---------S------SC--------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHc----CCEEEEEEeCCcccc---------c------cC--------------------
Confidence 46899999999999999999996 999999999885510 0 00
Q ss_pred ccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCc
Q 010225 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (514)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~ 214 (514)
..+.+.+.+.+++.| ++++++++|++++..
T Consensus 224 ------------------------------------~~~~~~l~~~l~~~g-v~i~~~~~v~~i~~~------------- 253 (478)
T 1v59_A 224 ------------------------------------GEVAKATQKFLKKQG-LDFKLSTKVISAKRN------------- 253 (478)
T ss_dssp ------------------------------------HHHHHHHHHHHHHTT-CEEECSEEEEEEEEE-------------
T ss_pred ------------------------------------HHHHHHHHHHHHHCC-CEEEeCCEEEEEEEe-------------
Confidence 335566777777777 999999999999640
Q ss_pred cccccccCCeeEEEeC-----CCcEEEeeE-EEecCCCchhh
Q 010225 215 ATTLFTKGHLAKLDLS-----DGTSLYAKL-VGADGGKSRVR 250 (514)
Q Consensus 215 ~~~~~~~~~~~~v~~~-----~g~~~~ad~-V~AdG~~S~vR 250 (514)
+.++.+.+.+. ++.++.||. |.|.|....+.
T Consensus 254 -----~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~ 290 (478)
T 1v59_A 254 -----DDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYIA 290 (478)
T ss_dssp -----TTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECCT
T ss_pred -----cCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCCC
Confidence 01244566654 356799999 99999876553
No 193
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.90 E-value=2.8e-05 Score=87.26 Aligned_cols=36 Identities=31% Similarity=0.404 Sum_probs=33.5
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
.+||+||||||+|+++|+.|++. |++|+|||+++.+
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~----G~~V~lie~~~~~ 163 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRS----GARVMLLDERAEA 163 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhC----CCcEEEEeCCCCC
Confidence 57999999999999999999996 9999999998765
No 194
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.90 E-value=4.9e-05 Score=78.35 Aligned_cols=99 Identities=17% Similarity=0.403 Sum_probs=74.4
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhhh
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (514)
..+|+|||||..|+-+|..|++. |.+|+|+|+.+.+. +. +
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~----g~~Vtlv~~~~~~l----------~~-----~--------------------- 213 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARL----GAEVTVVEFAPRCA----------PT-----L--------------------- 213 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSSSSS----------TT-----S---------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHh----CCEEEEEecCCccc----------cc-----C---------------------
Confidence 46899999999999999999996 99999999987541 00 0
Q ss_pred ccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHH-hcCCCceEEcCCeeEEEeeCCCCCCcccCCCC
Q 010225 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCM-QNTEFQKTIYPSRLTSMALLPSSSSISVDSTP 213 (514)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~-~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~ 213 (514)
...+.+.+.+.+ ++.| ++++++++|++++.
T Consensus 214 -----------------------------------d~~~~~~l~~~l~~~~g-v~i~~~~~v~~i~~------------- 244 (468)
T 2qae_A 214 -----------------------------------DEDVTNALVGALAKNEK-MKFMTSTKVVGGTN------------- 244 (468)
T ss_dssp -----------------------------------CHHHHHHHHHHHHHHTC-CEEECSCEEEEEEE-------------
T ss_pred -----------------------------------CHHHHHHHHHHHhhcCC-cEEEeCCEEEEEEE-------------
Confidence 022445666777 6777 99999999999976
Q ss_pred ccccccccCCeeEEEeC--CC--cEEEeeE-EEecCCCchh
Q 010225 214 SATTLFTKGHLAKLDLS--DG--TSLYAKL-VGADGGKSRV 249 (514)
Q Consensus 214 ~~~~~~~~~~~~~v~~~--~g--~~~~ad~-V~AdG~~S~v 249 (514)
+++.+.+.+. +| +++.||. |.|.|..+..
T Consensus 245 -------~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~p~~ 278 (468)
T 2qae_A 245 -------NGDSVSLEVEGKNGKRETVTCEALLVSVGRRPFT 278 (468)
T ss_dssp -------CSSSEEEEEECC---EEEEEESEEEECSCEEECC
T ss_pred -------cCCeEEEEEEcCCCceEEEECCEEEECCCcccCC
Confidence 2334666665 66 5799999 9999987654
No 195
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.87 E-value=6.3e-05 Score=78.22 Aligned_cols=99 Identities=15% Similarity=0.211 Sum_probs=78.1
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhhh
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (514)
..+|+|||||..|+-+|..|++. |.+|+|+|+.+.+. . .+
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~----g~~Vtlv~~~~~~l----------~-----~~--------------------- 221 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTEL----GVPVTVVASQDHVL----------P-----YE--------------------- 221 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHT----TCCEEEECSSSSSS----------C-----CS---------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc----CCeEEEEEcCCccc----------c-----cc---------------------
Confidence 46899999999999999999996 89999999987541 0 00
Q ss_pred ccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCc
Q 010225 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (514)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~ 214 (514)
-..+.+.+.+.+++.| ++|+++++|++++.
T Consensus 222 -----------------------------------d~~~~~~l~~~l~~~G-V~i~~~~~V~~i~~-------------- 251 (499)
T 1xdi_A 222 -----------------------------------DADAALVLEESFAERG-VRLFKNARAASVTR-------------- 251 (499)
T ss_dssp -----------------------------------SHHHHHHHHHHHHHTT-CEEETTCCEEEEEE--------------
T ss_pred -----------------------------------CHHHHHHHHHHHHHCC-CEEEeCCEEEEEEE--------------
Confidence 0124455667777777 99999999999976
Q ss_pred cccccccCCeeEEEeCCCcEEEeeE-EEecCCCchh
Q 010225 215 ATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKSRV 249 (514)
Q Consensus 215 ~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S~v 249 (514)
+++.+.+.+.+|+++.||. |.|.|..+..
T Consensus 252 ------~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~ 281 (499)
T 1xdi_A 252 ------TGAGVLVTMTDGRTVEGSHALMTIGSVPNT 281 (499)
T ss_dssp ------CSSSEEEEETTSCEEEESEEEECCCEEECC
T ss_pred ------eCCEEEEEECCCcEEEcCEEEECCCCCcCC
Confidence 3344778888888999999 9999987654
No 196
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.87 E-value=2e-05 Score=81.57 Aligned_cols=99 Identities=9% Similarity=0.145 Sum_probs=76.6
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhhh
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (514)
..+|+|||||..|+-+|..|++. |.+|+|+|+.+.+. .. +
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~----G~~Vtlv~~~~~~l----------~~-----~--------------------- 224 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTL----GSRLDVVEMMDGLM----------QG-----A--------------------- 224 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHH----TCEEEEECSSSSSS----------TT-----S---------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc----CCeEEEEEECCccc----------cc-----c---------------------
Confidence 46899999999999999999996 99999999987541 00 0
Q ss_pred ccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCc
Q 010225 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (514)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~ 214 (514)
-..+.+.+.+.+++.| ++++++++|++++.
T Consensus 225 -----------------------------------~~~~~~~l~~~l~~~g-V~i~~~~~v~~i~~-------------- 254 (482)
T 1ojt_A 225 -----------------------------------DRDLVKVWQKQNEYRF-DNIMVNTKTVAVEP-------------- 254 (482)
T ss_dssp -----------------------------------CHHHHHHHHHHHGGGE-EEEECSCEEEEEEE--------------
T ss_pred -----------------------------------CHHHHHHHHHHHHhcC-CEEEECCEEEEEEE--------------
Confidence 0124455667777777 99999999999976
Q ss_pred cccccccCCeeEEEeCC----CcEEEeeE-EEecCCCchh
Q 010225 215 ATTLFTKGHLAKLDLSD----GTSLYAKL-VGADGGKSRV 249 (514)
Q Consensus 215 ~~~~~~~~~~~~v~~~~----g~~~~ad~-V~AdG~~S~v 249 (514)
.++.+.|.+.+ |+++.||. |.|.|....+
T Consensus 255 ------~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~ 288 (482)
T 1ojt_A 255 ------KEDGVYVTFEGANAPKEPQRYDAVLVAAGRAPNG 288 (482)
T ss_dssp ------ETTEEEEEEESSSCCSSCEEESCEEECCCEEECG
T ss_pred ------cCCeEEEEEeccCCCceEEEcCEEEECcCCCcCC
Confidence 33456677766 77899999 9999987654
No 197
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.86 E-value=8.3e-05 Score=76.79 Aligned_cols=100 Identities=12% Similarity=0.194 Sum_probs=75.5
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhhh
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (514)
..+|+|||||+.|+-+|..|++. |.+|+|+|+.+.+. . + .
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~----g~~Vtlv~~~~~~l----------~--~--~---------------------- 217 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRL----GADVTAVEFLGHVG----------G--V--G---------------------- 217 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSSSSS----------C--S--S----------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHc----CCEEEEEeccCccC----------C--c--c----------------------
Confidence 46899999999999999999996 99999999987541 0 0 0
Q ss_pred ccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCc
Q 010225 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (514)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~ 214 (514)
+ ...+.+.+.+.+++.| ++++++++|++++.
T Consensus 218 -------------------~---------------~~~~~~~l~~~l~~~G-v~i~~~~~v~~i~~-------------- 248 (474)
T 1zmd_A 218 -------------------I---------------DMEISKNFQRILQKQG-FKFKLNTKVTGATK-------------- 248 (474)
T ss_dssp -------------------C---------------CHHHHHHHHHHHHHTT-CEEECSEEEEEEEE--------------
T ss_pred -------------------c---------------CHHHHHHHHHHHHHCC-CEEEeCceEEEEEE--------------
Confidence 0 1234456677777777 99999999999976
Q ss_pred cccccccCCe-eEEEe-----CCCcEEEeeE-EEecCCCchh
Q 010225 215 ATTLFTKGHL-AKLDL-----SDGTSLYAKL-VGADGGKSRV 249 (514)
Q Consensus 215 ~~~~~~~~~~-~~v~~-----~~g~~~~ad~-V~AdG~~S~v 249 (514)
+++. +.+.+ .++.++.||. |.|.|.....
T Consensus 249 ------~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~ 284 (474)
T 1zmd_A 249 ------KSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFT 284 (474)
T ss_dssp ------CTTSCEEEEEEETTSCCCEEEEESEEEECSCEEECC
T ss_pred ------cCCceEEEEEEecCCCCceEEEcCEEEECcCCCcCC
Confidence 2223 55653 4667899999 9999976554
No 198
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.86 E-value=6.6e-05 Score=78.07 Aligned_cols=100 Identities=12% Similarity=0.165 Sum_probs=77.1
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhhh
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (514)
..+|+|||||+.|+-+|..|++. |.+|+|+|+.+.+. . .+
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~----g~~Vtlv~~~~~~l----------~-----~~--------------------- 215 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRL----GIDSYIFARGNRIL----------R-----KF--------------------- 215 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTT----TCEEEEECSSSSSC----------T-----TS---------------------
T ss_pred CCeEEEECChHHHHHHHHHHHHc----CCeEEEEecCCccC----------c-----cc---------------------
Confidence 46899999999999999999996 99999999987540 0 00
Q ss_pred ccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCc
Q 010225 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (514)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~ 214 (514)
-..+.+.+.+.+++.| ++++++++|++++.
T Consensus 216 -----------------------------------d~~~~~~l~~~l~~~g-v~i~~~~~v~~i~~-------------- 245 (500)
T 1onf_A 216 -----------------------------------DESVINVLENDMKKNN-INIVTFADVVEIKK-------------- 245 (500)
T ss_dssp -----------------------------------CHHHHHHHHHHHHHTT-CEEECSCCEEEEEE--------------
T ss_pred -----------------------------------chhhHHHHHHHHHhCC-CEEEECCEEEEEEE--------------
Confidence 0123345666677777 99999999999975
Q ss_pred cccccccCCeeEEEeCCCcE-EEeeE-EEecCCCchh
Q 010225 215 ATTLFTKGHLAKLDLSDGTS-LYAKL-VGADGGKSRV 249 (514)
Q Consensus 215 ~~~~~~~~~~~~v~~~~g~~-~~ad~-V~AdG~~S~v 249 (514)
+.++.+.|.+.+|++ +.||. |.|.|.....
T Consensus 246 -----~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~~ 277 (500)
T 1onf_A 246 -----VSDKNLSIHLSDGRIYEHFDHVIYCVGRSPDT 277 (500)
T ss_dssp -----SSTTCEEEEETTSCEEEEESEEEECCCBCCTT
T ss_pred -----cCCceEEEEECCCcEEEECCEEEECCCCCcCC
Confidence 112347788889987 99999 9999987655
No 199
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.85 E-value=6.9e-05 Score=77.86 Aligned_cols=37 Identities=19% Similarity=0.393 Sum_probs=33.1
Q ss_pred CCCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 52 NDDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 52 ~~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
...+.+|||||||++|+++|..|++. +++|+|||+++
T Consensus 39 ~~~KprVVIIGgG~AGl~~A~~L~~~----~~~VtLId~~~ 75 (502)
T 4g6h_A 39 HSDKPNVLILGSGWGAISFLKHIDTK----KYNVSIISPRS 75 (502)
T ss_dssp SCSSCEEEEECSSHHHHHHHHHSCTT----TCEEEEEESSS
T ss_pred CCCCCCEEEECCcHHHHHHHHHhhhC----CCcEEEECCCC
Confidence 34567899999999999999999985 89999999987
No 200
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.85 E-value=6.3e-05 Score=78.00 Aligned_cols=103 Identities=12% Similarity=0.108 Sum_probs=77.8
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhhh
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (514)
..+|+|||||..|+-+|..|++.. ..|.+|+|+|+.+.+. .. +
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~-~~g~~Vtlv~~~~~~l----------~~-----~--------------------- 229 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYK-ARGGQVDLAYRGDMIL----------RG-----F--------------------- 229 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHS-CTTCEEEEEESSSSSS----------TT-----S---------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhc-cCcCeEEEEEcCCCcc----------cc-----c---------------------
Confidence 458999999999999999998830 0188999999987541 00 0
Q ss_pred ccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCc
Q 010225 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (514)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~ 214 (514)
-..+.+.|.+.+++.| ++++++++|++++.
T Consensus 230 -----------------------------------d~~~~~~l~~~l~~~G-V~i~~~~~v~~i~~-------------- 259 (490)
T 1fec_A 230 -----------------------------------DSELRKQLTEQLRANG-INVRTHENPAKVTK-------------- 259 (490)
T ss_dssp -----------------------------------CHHHHHHHHHHHHHTT-EEEEETCCEEEEEE--------------
T ss_pred -----------------------------------CHHHHHHHHHHHHhCC-CEEEeCCEEEEEEE--------------
Confidence 0124456777777777 99999999999976
Q ss_pred cccccccCCeeEEEeCCCcEEEeeE-EEecCCCchh
Q 010225 215 ATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKSRV 249 (514)
Q Consensus 215 ~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S~v 249 (514)
+.++.+.|.+.+|+++.||. |.|.|.....
T Consensus 260 -----~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~ 290 (490)
T 1fec_A 260 -----NADGTRHVVFESGAEADYDVVMLAIGRVPRS 290 (490)
T ss_dssp -----CTTSCEEEEETTSCEEEESEEEECSCEEESC
T ss_pred -----cCCCEEEEEECCCcEEEcCEEEEccCCCcCc
Confidence 11234778888998899999 9999987654
No 201
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.81 E-value=7.2e-06 Score=85.22 Aligned_cols=35 Identities=26% Similarity=0.364 Sum_probs=32.5
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
.+|||+||||||+|+++|+.|++. |++|+|||++.
T Consensus 7 ~~~DvvVIGgG~aGl~aA~~la~~----G~~V~liE~~~ 41 (492)
T 3ic9_A 7 INVDVAIIGTGTAGMGAYRAAKKH----TDKVVLIEGGA 41 (492)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTT----CSCEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC----CCcEEEEeCCC
Confidence 358999999999999999999997 99999999975
No 202
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.81 E-value=1.3e-05 Score=83.15 Aligned_cols=41 Identities=17% Similarity=0.289 Sum_probs=35.7
Q ss_pred CCCCccEEEECCCHHHHHHHHHhccCCCCCC-cEEEEEcCCCCCCC
Q 010225 52 NDDQYDVAVVGGGMVGMALACSLASMPLTKH-LSVAIIDSNPALGK 96 (514)
Q Consensus 52 ~~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g-~~V~viE~~~~~~~ 96 (514)
+.+.+||+|||||++||++|+.|++. | .+|+|+|+++.++.
T Consensus 6 ~~~~~~v~iiG~G~~Gl~~A~~l~~~----g~~~v~v~E~~~~~GG 47 (484)
T 4dsg_A 6 ELLTPKIVIIGAGPTGLGAAVRLTEL----GYKNWHLYECNDTPGG 47 (484)
T ss_dssp -CCSCCEEEECCSHHHHHHHHHHHHT----TCCSEEEEESSSSSSG
T ss_pred cccCCCEEEECcCHHHHHHHHHHHHc----CCCCEEEEeCCCCCCC
Confidence 34578999999999999999999996 7 79999999987753
No 203
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.80 E-value=0.00018 Score=73.81 Aligned_cols=99 Identities=15% Similarity=0.223 Sum_probs=74.7
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhhh
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (514)
..+|+|||||..|+-+|..|++. |.+|+|+|+.+.+. . + .+
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~----g~~Vtlv~~~~~~l----------~--~---------------~~-------- 189 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQ----NYNVNLIDGHERVL----------Y--K---------------YF-------- 189 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTT----TCEEEEEESSSSTT----------T--T---------------TS--------
T ss_pred CCeEEEECcCHHHHHHHHHHHhc----CCEEEEEEcCCchh----------h--h---------------hh--------
Confidence 45899999999999999999996 99999999987541 0 0 00
Q ss_pred ccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCc
Q 010225 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (514)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~ 214 (514)
-..+.+.+.+.+++.| ++++++++|++++.
T Consensus 190 -----------------------------------~~~~~~~l~~~l~~~G-v~i~~~~~v~~i~~-------------- 219 (452)
T 2cdu_A 190 -----------------------------------DKEFTDILAKDYEAHG-VNLVLGSKVAAFEE-------------- 219 (452)
T ss_dssp -----------------------------------CHHHHHHHHHHHHHTT-CEEEESSCEEEEEE--------------
T ss_pred -----------------------------------hhhHHHHHHHHHHHCC-CEEEcCCeeEEEEc--------------
Confidence 0224556667777777 99999999999975
Q ss_pred cccccccCCeeE-EEeCCCcEEEeeE-EEecCCCchh
Q 010225 215 ATTLFTKGHLAK-LDLSDGTSLYAKL-VGADGGKSRV 249 (514)
Q Consensus 215 ~~~~~~~~~~~~-v~~~~g~~~~ad~-V~AdG~~S~v 249 (514)
.++.+. +.+ +|+++.||. |.|.|.....
T Consensus 220 ------~~~~v~~v~~-~g~~i~~D~vv~a~G~~p~~ 249 (452)
T 2cdu_A 220 ------VDDEIITKTL-DGKEIKSDIAILCIGFRPNT 249 (452)
T ss_dssp ------ETTEEEEEET-TSCEEEESEEEECCCEEECC
T ss_pred ------CCCeEEEEEe-CCCEEECCEEEECcCCCCCH
Confidence 234443 444 788899999 9999976554
No 204
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.80 E-value=1.3e-05 Score=79.88 Aligned_cols=36 Identities=31% Similarity=0.600 Sum_probs=33.5
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALG 95 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~ 95 (514)
+||+|||||++|+++|+.|++. |++|+|+|+++.++
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~----g~~v~v~E~~~~~G 37 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKL----NKKVLVIEKRNHIG 37 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGG----TCCEEEECSSSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhC----CCcEEEEecCCCCC
Confidence 6999999999999999999996 99999999988665
No 205
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.79 E-value=4e-05 Score=79.06 Aligned_cols=99 Identities=14% Similarity=0.301 Sum_probs=74.9
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhhh
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (514)
..+|+|||||+.|+-+|..|++. |.+|+|+|+.+.+. .. +
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~----g~~Vtli~~~~~~l----------~~------------------~-------- 216 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRI----GSEVTVVEFASEIV----------PT------------------M-------- 216 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHH----TCEEEEECSSSSSS----------TT------------------S--------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc----CCcEEEEEcCCccc----------cc------------------c--------
Confidence 46899999999999999999996 89999999987541 00 0
Q ss_pred ccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCc
Q 010225 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (514)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~ 214 (514)
...+.+.+.+.+++.| ++++++++|++++.
T Consensus 217 -----------------------------------~~~~~~~l~~~l~~~g-v~i~~~~~v~~i~~-------------- 246 (470)
T 1dxl_A 217 -----------------------------------DAEIRKQFQRSLEKQG-MKFKLKTKVVGVDT-------------- 246 (470)
T ss_dssp -----------------------------------CHHHHHHHHHHHHHSS-CCEECSEEEEEEEC--------------
T ss_pred -----------------------------------cHHHHHHHHHHHHHcC-CEEEeCCEEEEEEE--------------
Confidence 0134455667777777 99999999999975
Q ss_pred cccccccCCeeEEEeC---CC--cEEEeeE-EEecCCCchh
Q 010225 215 ATTLFTKGHLAKLDLS---DG--TSLYAKL-VGADGGKSRV 249 (514)
Q Consensus 215 ~~~~~~~~~~~~v~~~---~g--~~~~ad~-V~AdG~~S~v 249 (514)
+++.+.+.+. +| .++.+|. |.|.|.....
T Consensus 247 ------~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~ 281 (470)
T 1dxl_A 247 ------SGDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPFT 281 (470)
T ss_dssp ------SSSSEEEEEEESSSCCCEEEEESEEECCCCEEECC
T ss_pred ------cCCeEEEEEEecCCCcceEEECCEEEECCCCCcCC
Confidence 2234566654 44 5799999 9999987654
No 206
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.79 E-value=0.00011 Score=75.92 Aligned_cols=109 Identities=20% Similarity=0.289 Sum_probs=81.6
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhhh
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (514)
..+|+|||||+.|+-+|..|++. .|.+|+++|+.+.+. ...
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~---~g~~Vtlv~~~~~~l----------~~~-------------------------- 199 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADM---WGIDTTVVELADQIM----------PGF-------------------------- 199 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHH---HCCEEEEECSSSSSS----------TTT--------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHh---cCCcEEEEEccCccc----------ccc--------------------------
Confidence 46899999999999999999983 178999999887441 000
Q ss_pred ccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCc
Q 010225 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (514)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~ 214 (514)
....+.+.|.+.+++.| ++++++++|++++.
T Consensus 200 ----------------------------------~~~~~~~~l~~~l~~~G-V~i~~~~~v~~i~~-------------- 230 (472)
T 3iwa_A 200 ----------------------------------TSKSLSQMLRHDLEKND-VVVHTGEKVVRLEG-------------- 230 (472)
T ss_dssp ----------------------------------SCHHHHHHHHHHHHHTT-CEEECSCCEEEEEE--------------
T ss_pred ----------------------------------cCHHHHHHHHHHHHhcC-CEEEeCCEEEEEEc--------------
Confidence 01235566777777777 99999999999975
Q ss_pred cccccccCCeeEEEeCCCcEEEeeE-EEecCCCch--hhhhhCCCc
Q 010225 215 ATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKSR--VRELAGFKT 257 (514)
Q Consensus 215 ~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S~--vR~~l~~~~ 257 (514)
.++.+.+.+.+|+++.||. |.|.|.... +-+.++...
T Consensus 231 ------~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~gl~~ 270 (472)
T 3iwa_A 231 ------ENGKVARVITDKRTLDADLVILAAGVSPNTQLARDAGLEL 270 (472)
T ss_dssp ------SSSBEEEEEESSCEEECSEEEECSCEEECCHHHHHHTCCB
T ss_pred ------cCCeEEEEEeCCCEEEcCEEEECCCCCcCHHHHHhCCccC
Confidence 3456778888998999999 999998654 334445443
No 207
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.79 E-value=9.8e-05 Score=74.67 Aligned_cols=103 Identities=21% Similarity=0.301 Sum_probs=77.1
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhhh
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (514)
..+|+|||||..|+-+|..|++. |.+|+|+|+.+.+. . .
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~----g~~Vtlv~~~~~~l----------~---------~------------------ 183 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTA----GVHVSLVETQPRLM----------S---------R------------------ 183 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT----TCEEEEEESSSSSS----------T---------T------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhC----CCEEEEEEeCCccc----------c---------c------------------
Confidence 46899999999999999999996 99999999987441 0 0
Q ss_pred ccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCc
Q 010225 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (514)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~ 214 (514)
.+ ...+...+.+.+++.| ++++++++|++++.
T Consensus 184 --~~-------------------------------~~~~~~~l~~~l~~~G-V~i~~~~~v~~i~~-------------- 215 (408)
T 2gqw_A 184 --AA-------------------------------PATLADFVARYHAAQG-VDLRFERSVTGSVD-------------- 215 (408)
T ss_dssp --TS-------------------------------CHHHHHHHHHHHHHTT-CEEEESCCEEEEET--------------
T ss_pred --cc-------------------------------CHHHHHHHHHHHHHcC-cEEEeCCEEEEEEC--------------
Confidence 00 0224456667777777 99999999999852
Q ss_pred cccccccCCeeEEEeCCCcEEEeeE-EEecCCCch--hhhhhCCC
Q 010225 215 ATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKSR--VRELAGFK 256 (514)
Q Consensus 215 ~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S~--vR~~l~~~ 256 (514)
+ .|.+.+|+++.||. |.|.|.... +-+.++..
T Consensus 216 --------~--~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~gl~ 250 (408)
T 2gqw_A 216 --------G--VVLLDDGTRIAADMVVVGIGVLANDALARAAGLA 250 (408)
T ss_dssp --------T--EEEETTSCEEECSEEEECSCEEECCHHHHHHTCC
T ss_pred --------C--EEEECCCCEEEcCEEEECcCCCccHHHHHhCCCC
Confidence 2 56778898999999 999997654 33344443
No 208
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.78 E-value=4e-05 Score=78.77 Aligned_cols=97 Identities=18% Similarity=0.254 Sum_probs=72.2
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhhh
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (514)
..+|+|||||++|+-+|..|++. |.+|+|+|+.+.+. + .+.
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~----g~~Vtlv~~~~~~l----------~-----~~~-------------------- 211 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKL----GAQVSVVEARERIL----------P-----TYD-------------------- 211 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHH----TCEEEEECSSSSSS----------T-----TSC--------------------
T ss_pred CCeEEEECcCHHHHHHHHHHHHC----CCeEEEEEcCCccc----------c-----ccC--------------------
Confidence 46899999999999999999996 99999999987541 0 000
Q ss_pred ccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCc
Q 010225 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (514)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~ 214 (514)
..+.+.+.+.+++.| ++++++++|++++.
T Consensus 212 ------------------------------------~~~~~~l~~~l~~~g-v~i~~~~~v~~i~~-------------- 240 (458)
T 1lvl_A 212 ------------------------------------SELTAPVAESLKKLG-IALHLGHSVEGYEN-------------- 240 (458)
T ss_dssp ------------------------------------HHHHHHHHHHHHHHT-CEEETTCEEEEEET--------------
T ss_pred ------------------------------------HHHHHHHHHHHHHCC-CEEEECCEEEEEEe--------------
Confidence 123344555666666 99999999999962
Q ss_pred cccccccCCeeEEEeCCC--cEEEeeE-EEecCCCchh
Q 010225 215 ATTLFTKGHLAKLDLSDG--TSLYAKL-VGADGGKSRV 249 (514)
Q Consensus 215 ~~~~~~~~~~~~v~~~~g--~~~~ad~-V~AdG~~S~v 249 (514)
+.+.+...+| .++.+|. |.|.|.....
T Consensus 241 --------~~v~v~~~~G~~~~i~~D~vv~a~G~~p~~ 270 (458)
T 1lvl_A 241 --------GCLLANDGKGGQLRLEADRVLVAVGRRPRT 270 (458)
T ss_dssp --------TEEEEECSSSCCCEECCSCEEECCCEEECC
T ss_pred --------CCEEEEECCCceEEEECCEEEECcCCCcCC
Confidence 2255554456 5799999 9999976654
No 209
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.78 E-value=0.00012 Score=75.29 Aligned_cols=97 Identities=15% Similarity=0.177 Sum_probs=75.8
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhhh
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (514)
..+|+|||||+.|+-+|..|++. |.+|+|+|+.+.+. . +.
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~----g~~Vtlv~~~~~~l----------~------~~-------------------- 215 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARL----GSKVTVLARNTLFF----------R------ED-------------------- 215 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSCTTT----------T------SC--------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHc----CCEEEEEEECCccC----------C------CC--------------------
Confidence 46899999999999999999996 89999999987541 0 00
Q ss_pred ccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCc
Q 010225 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (514)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~ 214 (514)
..+.+.+.+.+++.| ++++++++|++++.
T Consensus 216 ------------------------------------~~~~~~l~~~l~~~G-v~i~~~~~v~~i~~-------------- 244 (467)
T 1zk7_A 216 ------------------------------------PAIGEAVTAAFRAEG-IEVLEHTQASQVAH-------------- 244 (467)
T ss_dssp ------------------------------------HHHHHHHHHHHHHTT-CEEETTCCEEEEEE--------------
T ss_pred ------------------------------------HHHHHHHHHHHHhCC-CEEEcCCEEEEEEE--------------
Confidence 124456677777777 99999999999975
Q ss_pred cccccccCCeeEEEeCCCcEEEeeE-EEecCCCchh
Q 010225 215 ATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKSRV 249 (514)
Q Consensus 215 ~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S~v 249 (514)
++..+.|.++ +.++.||. |.|.|.++..
T Consensus 245 ------~~~~~~v~~~-~~~i~aD~Vv~a~G~~p~~ 273 (467)
T 1zk7_A 245 ------MDGEFVLTTT-HGELRADKLLVATGRTPNT 273 (467)
T ss_dssp ------ETTEEEEEET-TEEEEESEEEECSCEEESC
T ss_pred ------eCCEEEEEEC-CcEEEcCEEEECCCCCcCC
Confidence 3345667765 45799999 9999987764
No 210
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.78 E-value=1.9e-05 Score=79.29 Aligned_cols=37 Identities=30% Similarity=0.491 Sum_probs=34.3
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALG 95 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~ 95 (514)
++||+|||||++|+++|+.|++. |++|+|+|+++.++
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~----g~~v~v~E~~~~~G 39 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEK----GHQVHIIDQRDHIG 39 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT----TCEEEEEESSSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHC----CCcEEEEEecCCcC
Confidence 47999999999999999999996 99999999998775
No 211
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.77 E-value=0.00012 Score=75.79 Aligned_cols=99 Identities=15% Similarity=0.279 Sum_probs=74.4
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhh
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQH 133 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~ 133 (514)
...+|+|||||++|+-+|..|++. |.+|+|+|+.+.+. . .+
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~----g~~Vtlv~~~~~~l----------~-----~~-------------------- 225 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVEL----GKKVRMIERNDHIG----------T-----IY-------------------- 225 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHT----TCEEEEECCGGGTT----------S-----SS--------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHhc----CCeEEEEEeCCchh----------h-----cC--------------------
Confidence 356899999999999999999996 99999999987441 0 00
Q ss_pred hccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCC
Q 010225 134 RHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTP 213 (514)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~ 213 (514)
...+.+.+.+.+++.| ++++++++|++++.
T Consensus 226 ------------------------------------~~~~~~~l~~~l~~~G-v~i~~~~~v~~i~~------------- 255 (480)
T 3cgb_A 226 ------------------------------------DGDMAEYIYKEADKHH-IEILTNENVKAFKG------------- 255 (480)
T ss_dssp ------------------------------------CHHHHHHHHHHHHHTT-CEEECSCCEEEEEE-------------
T ss_pred ------------------------------------CHHHHHHHHHHHHHcC-cEEEcCCEEEEEEc-------------
Confidence 0234556777777777 99999999999975
Q ss_pred ccccccccCCeeEEEeCCCcEEEeeE-EEecCCCchh
Q 010225 214 SATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKSRV 249 (514)
Q Consensus 214 ~~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S~v 249 (514)
++....+.++ +.++.||. |.|.|.....
T Consensus 256 -------~~~v~~v~~~-~~~i~~D~vi~a~G~~p~~ 284 (480)
T 3cgb_A 256 -------NERVEAVETD-KGTYKADLVLVSVGVKPNT 284 (480)
T ss_dssp -------SSBEEEEEET-TEEEECSEEEECSCEEESC
T ss_pred -------CCcEEEEEEC-CCEEEcCEEEECcCCCcCh
Confidence 2233345554 45799999 9999976543
No 212
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.77 E-value=0.00018 Score=73.68 Aligned_cols=99 Identities=18% Similarity=0.249 Sum_probs=76.6
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhhh
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (514)
..+|+|||||..|+-+|..|++. |.+|+++|+.+.+. . .
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~----g~~Vtlv~~~~~~l----------~---------~------------------ 185 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKM----KKTVHVFESLENLL----------P---------K------------------ 185 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT----TCEEEEEESSSSSS----------T---------T------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhC----CCeEEEEEccCccc----------c---------c------------------
Confidence 46899999999999999999996 99999999987541 0 0
Q ss_pred ccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCc
Q 010225 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (514)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~ 214 (514)
. + -..+.+.+.+.+++.| ++++++++|++++.
T Consensus 186 --~----------------~---------------d~~~~~~l~~~l~~~G-V~i~~~~~v~~i~~-------------- 217 (452)
T 3oc4_A 186 --Y----------------F---------------DKEMVAEVQKSLEKQA-VIFHFEETVLGIEE-------------- 217 (452)
T ss_dssp --T----------------C---------------CHHHHHHHHHHHHTTT-EEEEETCCEEEEEE--------------
T ss_pred --c----------------C---------------CHHHHHHHHHHHHHcC-CEEEeCCEEEEEEc--------------
Confidence 0 0 0234566777777777 99999999999975
Q ss_pred cccccccCCeeEEEeCCCcEEEeeE-EEecCCCchh
Q 010225 215 ATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKSRV 249 (514)
Q Consensus 215 ~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S~v 249 (514)
.++.+.|.+++| ++.||. |.|.|.....
T Consensus 218 ------~~~~v~v~~~~g-~i~aD~Vv~A~G~~p~~ 246 (452)
T 3oc4_A 218 ------TANGIVLETSEQ-EISCDSGIFALNLHPQL 246 (452)
T ss_dssp ------CSSCEEEEESSC-EEEESEEEECSCCBCCC
T ss_pred ------cCCeEEEEECCC-EEEeCEEEECcCCCCCh
Confidence 334557778777 899999 9999976543
No 213
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.76 E-value=0.00025 Score=68.76 Aligned_cols=36 Identities=28% Similarity=0.420 Sum_probs=32.1
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
..+|+|||+|++|+-+|..|++. |.+|+++++.+.+
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~~----g~~Vtlv~~~~~~ 180 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSNI----ASEVHLIHRRDGF 180 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTT----SSEEEEECSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhc----CCeEEEEEeCCcc
Confidence 45899999999999999999996 8999999987643
No 214
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.76 E-value=8.4e-05 Score=74.02 Aligned_cols=92 Identities=22% Similarity=0.285 Sum_probs=72.3
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhhhc
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRH 135 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~~ 135 (514)
.+|+|||||++|+-+|..|++. |.+|+|+|+.+.+. . +.
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~----g~~Vtlv~~~~~~l----------~------~~--------------------- 182 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEA----GYHVKLIHRGAMFL----------G------LD--------------------- 182 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHT----TCEEEEECSSSCCT----------T------CC---------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhC----CCEEEEEeCCCeec----------c------CC---------------------
Confidence 5899999999999999999996 99999999987541 0 00
Q ss_pred cCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCcc
Q 010225 136 AYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSA 215 (514)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~~ 215 (514)
..+.+.+.+.+++.| ++++++++|++++.
T Consensus 183 -----------------------------------~~~~~~l~~~l~~~g-V~i~~~~~v~~i~~--------------- 211 (367)
T 1xhc_A 183 -----------------------------------EELSNMIKDMLEETG-VKFFLNSELLEANE--------------- 211 (367)
T ss_dssp -----------------------------------HHHHHHHHHHHHHTT-EEEECSCCEEEECS---------------
T ss_pred -----------------------------------HHHHHHHHHHHHHCC-CEEEcCCEEEEEEe---------------
Confidence 134456667777777 99999999999853
Q ss_pred ccccccCCeeEEEeCCCcEEEeeE-EEecCCCchh
Q 010225 216 TTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKSRV 249 (514)
Q Consensus 216 ~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S~v 249 (514)
. .|.+++|+ +.+|. |.|.|.....
T Consensus 212 -------~--~v~~~~g~-i~~D~vi~a~G~~p~~ 236 (367)
T 1xhc_A 212 -------E--GVLTNSGF-IEGKVKICAIGIVPNV 236 (367)
T ss_dssp -------S--EEEETTEE-EECSCEEEECCEEECC
T ss_pred -------e--EEEECCCE-EEcCEEEECcCCCcCH
Confidence 2 35667887 99999 9999976554
No 215
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.75 E-value=0.00011 Score=74.78 Aligned_cols=110 Identities=16% Similarity=0.284 Sum_probs=78.4
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhhh
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (514)
..+|+|||||+.|+-+|..|++. |.+|+|+|+.+.+. . +
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~----G~~Vtlv~~~~~~l----------~--~------------------------- 187 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKA----NMHVTLLDTAARVL----------E--R------------------------- 187 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSSSTT----------T--T-------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhC----CCEEEEEEeCCccc----------c--c-------------------------
Confidence 46899999999999999999996 99999999877430 0 0
Q ss_pred ccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCc
Q 010225 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (514)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~ 214 (514)
. -...+.+.+.+.+++.| ++++++++|++++. + +
T Consensus 188 --~-------------------------------~~~~~~~~l~~~l~~~G-V~i~~~~~v~~i~~---------~--~- 221 (431)
T 1q1r_A 188 --V-------------------------------TAPPVSAFYEHLHREAG-VDIRTGTQVCGFEM---------S--T- 221 (431)
T ss_dssp --T-------------------------------SCHHHHHHHHHHHHHHT-CEEECSCCEEEEEE---------C--T-
T ss_pred --h-------------------------------hhHHHHHHHHHHHHhCC-eEEEeCCEEEEEEe---------c--c-
Confidence 0 00124455666666667 99999999999964 0 0
Q ss_pred cccccccCCeeEEEeCCCcEEEeeE-EEecCCCch--hhhhhCCC
Q 010225 215 ATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKSR--VRELAGFK 256 (514)
Q Consensus 215 ~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S~--vR~~l~~~ 256 (514)
+++....|.+.+|+++.||. |.|.|.... +-+.++..
T Consensus 222 -----~~~~v~~v~~~~G~~i~~D~Vv~a~G~~p~~~l~~~~gl~ 261 (431)
T 1q1r_A 222 -----DQQKVTAVLCEDGTRLPADLVIAGIGLIPNCELASAAGLQ 261 (431)
T ss_dssp -----TTCCEEEEEETTSCEEECSEEEECCCEEECCHHHHHTTCC
T ss_pred -----CCCcEEEEEeCCCCEEEcCEEEECCCCCcCcchhhccCCC
Confidence 01233468888999999999 999997654 33344443
No 216
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.75 E-value=0.00021 Score=74.01 Aligned_cols=100 Identities=21% Similarity=0.232 Sum_probs=74.4
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhh
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQH 133 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~ 133 (514)
...+|+|||||..|+-+|..|++. |.+|+|+|+.+.+. . + .+
T Consensus 193 ~~~~vvVIGgG~ig~E~A~~l~~~----g~~Vtlv~~~~~~l----------~--~---------------~~------- 234 (490)
T 2bc0_A 193 DIKRVAVVGAGYIGVELAEAFQRK----GKEVVLIDVVDTCL----------A--G---------------YY------- 234 (490)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHT----TCEEEEEESSSSTT----------T--T---------------TS-------
T ss_pred CCceEEEECCCHHHHHHHHHHHHC----CCeEEEEEcccchh----------h--h---------------HH-------
Confidence 346899999999999999999996 99999999987541 0 0 00
Q ss_pred hccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCC
Q 010225 134 RHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTP 213 (514)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~ 213 (514)
-..+.+.+.+.+++.| ++++++++|++++.
T Consensus 235 ------------------------------------~~~~~~~l~~~l~~~G-V~i~~~~~v~~i~~------------- 264 (490)
T 2bc0_A 235 ------------------------------------DRDLTDLMAKNMEEHG-IQLAFGETVKEVAG------------- 264 (490)
T ss_dssp ------------------------------------CHHHHHHHHHHHHTTT-CEEEETCCEEEEEC-------------
T ss_pred ------------------------------------HHHHHHHHHHHHHhCC-eEEEeCCEEEEEEc-------------
Confidence 0224556777777777 99999999999964
Q ss_pred ccccccccCCeeEEEeCCCcEEEeeE-EEecCCCchh
Q 010225 214 SATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKSRV 249 (514)
Q Consensus 214 ~~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S~v 249 (514)
++....+.+ +|+++.||. |.|.|....+
T Consensus 265 -------~~~v~~v~~-~g~~i~~D~Vi~a~G~~p~~ 293 (490)
T 2bc0_A 265 -------NGKVEKIIT-DKNEYDVDMVILAVGFRPNT 293 (490)
T ss_dssp -------SSSCCEEEE-SSCEEECSEEEECCCEEECC
T ss_pred -------CCcEEEEEE-CCcEEECCEEEECCCCCcCh
Confidence 222223554 677899999 9999976543
No 217
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.74 E-value=2.4e-05 Score=79.86 Aligned_cols=42 Identities=31% Similarity=0.478 Sum_probs=37.2
Q ss_pred CCCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCC
Q 010225 52 NDDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKS 97 (514)
Q Consensus 52 ~~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~ 97 (514)
++..+||+|||||++|+++|+.|++. |++|+|+|+++.++..
T Consensus 3 ~~~~~~v~iiG~G~~gl~~a~~l~~~----g~~v~~~e~~~~~gg~ 44 (433)
T 1d5t_A 3 MDEEYDVIVLGTGLTECILSGIMSVN----GKKVLHMDRNPYYGGE 44 (433)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSSSCTT
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHHC----CCcEEEEecCCCcccc
Confidence 34578999999999999999999996 9999999999877644
No 218
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.73 E-value=0.00014 Score=75.41 Aligned_cols=98 Identities=19% Similarity=0.224 Sum_probs=74.2
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhhh
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (514)
..+|+|||||+.|+-+|..|++. |.+|+|+|+.+.+. . .+.
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~----g~~Vtlv~~~~~~l----------~-----~~d-------------------- 214 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRL----GVIVKVFGRSGSVA----------N-----LQD-------------------- 214 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHT----TCEEEEECCTTCCT----------T-----CCC--------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc----CCeEEEEEECCccc----------c-----cCC--------------------
Confidence 46899999999999999999997 99999999988541 0 000
Q ss_pred ccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCc
Q 010225 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (514)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~ 214 (514)
..+.+.+.+.+++ . ++++++++|++++.
T Consensus 215 ------------------------------------~~~~~~l~~~l~~-~-V~i~~~~~v~~i~~-------------- 242 (492)
T 3ic9_A 215 ------------------------------------EEMKRYAEKTFNE-E-FYFDAKARVISTIE-------------- 242 (492)
T ss_dssp ------------------------------------HHHHHHHHHHHHT-T-SEEETTCEEEEEEE--------------
T ss_pred ------------------------------------HHHHHHHHHHHhh-C-cEEEECCEEEEEEE--------------
Confidence 0344555666655 3 89999999999976
Q ss_pred cccccccCCeeEEEeC--CC--cEEEeeE-EEecCCCchh
Q 010225 215 ATTLFTKGHLAKLDLS--DG--TSLYAKL-VGADGGKSRV 249 (514)
Q Consensus 215 ~~~~~~~~~~~~v~~~--~g--~~~~ad~-V~AdG~~S~v 249 (514)
.++.+.+.+. +| .++.||. |.|.|.....
T Consensus 243 ------~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~~ 276 (492)
T 3ic9_A 243 ------KEDAVEVIYFDKSGQKTTESFQYVLAATGRKANV 276 (492)
T ss_dssp ------CSSSEEEEEECTTCCEEEEEESEEEECSCCEESC
T ss_pred ------cCCEEEEEEEeCCCceEEEECCEEEEeeCCccCC
Confidence 3345667664 67 5799999 9999986543
No 219
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.72 E-value=4.1e-05 Score=78.23 Aligned_cols=36 Identities=19% Similarity=0.353 Sum_probs=30.5
Q ss_pred cEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 57 DVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 57 dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
+|+||||||+|+++|..|++.+ ...+|+|||+++..
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g--~~~~V~lie~~~~~ 37 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLD--KESDIIIFEKDRDM 37 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHC--SSSCEEEEESSSCS
T ss_pred eEEEECCCHHHHHHHHHHHhCC--CCCcEEEEeCCCCC
Confidence 6999999999999999999862 13679999998754
No 220
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.72 E-value=0.0002 Score=75.59 Aligned_cols=118 Identities=16% Similarity=0.210 Sum_probs=79.1
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhhh
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (514)
..+|+|||||..|+-+|..|++. |.+|+++|+.+.+. .. +
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~~----g~~Vtlv~~~~~~l----------~~-----~--------------------- 190 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHHL----GIKTTLLELADQVM----------TP-----V--------------------- 190 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT----TCEEEEEESSSSSC----------TT-----S---------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhc----CCcEEEEEcCCccc----------hh-----c---------------------
Confidence 34899999999999999999996 99999999987541 00 0
Q ss_pred ccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCc
Q 010225 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (514)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~ 214 (514)
...+...+.+.+++.| ++++++++|++++...............
T Consensus 191 -----------------------------------~~~~~~~l~~~l~~~G-V~i~~~~~v~~i~~~~~~~~~~~~~~~~ 234 (565)
T 3ntd_A 191 -----------------------------------DREMAGFAHQAIRDQG-VDLRLGTALSEVSYQVQTHVASDAAGED 234 (565)
T ss_dssp -----------------------------------CHHHHHHHHHHHHHTT-CEEEETCCEEEEEEECCCCCCCGGGTCC
T ss_pred -----------------------------------CHHHHHHHHHHHHHCC-CEEEeCCeEEEEeccccccccccccccc
Confidence 0123455666677777 9999999999997521111111000000
Q ss_pred cccccccCCeeEEEeCCCcEEEeeE-EEecCCCchh
Q 010225 215 ATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKSRV 249 (514)
Q Consensus 215 ~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S~v 249 (514)
. .....++.+.+.+.+|+++.||. |.|.|.....
T Consensus 235 ~-~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~ 269 (565)
T 3ntd_A 235 T-AHQHIKGHLSLTLSNGELLETDLLIMAIGVRPET 269 (565)
T ss_dssp C-TTCCTTCEEEEEETTSCEEEESEEEECSCEEECC
T ss_pred c-ccccCCCcEEEEEcCCCEEEcCEEEECcCCccch
Confidence 0 00002356778888999999999 9999976543
No 221
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.71 E-value=0.00015 Score=75.29 Aligned_cols=99 Identities=21% Similarity=0.297 Sum_probs=75.0
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhhh
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (514)
..+|+|||||..|+-+|..|++. |.+|+|+|+.+.+. . .+.
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~----g~~Vtlv~~~~~~l----------~-----~~d-------------------- 238 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARL----GAKVTVVEFLDTIL----------G-----GMD-------------------- 238 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHH----TCEEEEECSSSSSS----------S-----SSC--------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc----CCEEEEEecccccc----------c-----cCC--------------------
Confidence 46899999999999999999996 89999999887541 0 000
Q ss_pred ccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCc
Q 010225 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (514)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~ 214 (514)
..+.+.+.+.+++.| ++++++++|++++.
T Consensus 239 ------------------------------------~~~~~~l~~~l~~~g-V~v~~~~~v~~i~~-------------- 267 (491)
T 3urh_A 239 ------------------------------------GEVAKQLQRMLTKQG-IDFKLGAKVTGAVK-------------- 267 (491)
T ss_dssp ------------------------------------HHHHHHHHHHHHHTT-CEEECSEEEEEEEE--------------
T ss_pred ------------------------------------HHHHHHHHHHHHhCC-CEEEECCeEEEEEE--------------
Confidence 234455666777777 99999999999976
Q ss_pred cccccccCCeeEEEeCC---C--cEEEeeE-EEecCCCchh
Q 010225 215 ATTLFTKGHLAKLDLSD---G--TSLYAKL-VGADGGKSRV 249 (514)
Q Consensus 215 ~~~~~~~~~~~~v~~~~---g--~~~~ad~-V~AdG~~S~v 249 (514)
.++.+.+.+.+ | .++.+|. |.|.|.....
T Consensus 268 ------~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~ 302 (491)
T 3urh_A 268 ------SGDGAKVTFEPVKGGEATTLDAEVVLIATGRKPST 302 (491)
T ss_dssp ------ETTEEEEEEEETTSCCCEEEEESEEEECCCCEECC
T ss_pred ------eCCEEEEEEEecCCCceEEEEcCEEEEeeCCccCC
Confidence 33556666542 4 5799999 9999976544
No 222
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=97.71 E-value=2e-05 Score=84.03 Aligned_cols=39 Identities=33% Similarity=0.480 Sum_probs=34.4
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCC
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALG 95 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~ 95 (514)
...+||+|||||++|+++|+.|++. |++|+|||+.+..+
T Consensus 44 ~~~~dvvIIG~G~aGl~aA~~l~~~----G~~V~liE~~~~~g 82 (623)
T 3pl8_A 44 DIKYDVVIVGSGPIGCTYARELVGA----GYKVAMFDIGEIDS 82 (623)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSCCCS
T ss_pred cccCCEEEECCcHHHHHHHHHHHhC----CCcEEEEeccCCCC
Confidence 3579999999999999999999996 99999999988664
No 223
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.71 E-value=2.2e-05 Score=81.57 Aligned_cols=40 Identities=28% Similarity=0.491 Sum_probs=35.9
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCC
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGK 96 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~ 96 (514)
...+||+|||||++||++|+.|++. |++|+|+|+.+.++.
T Consensus 31 ~~~~~v~IiGaG~~Gl~aA~~l~~~----g~~v~vlE~~~~~gg 70 (498)
T 2iid_A 31 SNPKHVVIVGAGMAGLSAAYVLAGA----GHQVTVLEASERPGG 70 (498)
T ss_dssp SSCCEEEEECCBHHHHHHHHHHHHH----TCEEEEECSSSSSBT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhC----CCeEEEEECCCCCCC
Confidence 3468999999999999999999996 999999999987754
No 224
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.69 E-value=0.0001 Score=75.90 Aligned_cols=99 Identities=19% Similarity=0.295 Sum_probs=73.6
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhhh
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (514)
..+|+|||||..|+-+|..|++. |.+|+|+|+.+.+. + .+.
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~----g~~Vtlv~~~~~~l----------~-----~~~-------------------- 211 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNY----GVDVTIVEFLPRAL----------P-----NED-------------------- 211 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSSSSS----------T-----TSC--------------------
T ss_pred CCeEEEECCcHHHHHHHHHHHHc----CCeEEEEEcCCccc----------c-----ccC--------------------
Confidence 46899999999999999999996 99999999987540 0 000
Q ss_pred ccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCc
Q 010225 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (514)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~ 214 (514)
..+.+.+.+.+++.| ++++++++|++++.
T Consensus 212 ------------------------------------~~~~~~l~~~l~~~g-v~i~~~~~v~~i~~-------------- 240 (464)
T 2a8x_A 212 ------------------------------------ADVSKEIEKQFKKLG-VTILTATKVESIAD-------------- 240 (464)
T ss_dssp ------------------------------------HHHHHHHHHHHHHHT-CEEECSCEEEEEEE--------------
T ss_pred ------------------------------------HHHHHHHHHHHHHcC-CEEEeCcEEEEEEE--------------
Confidence 123344555666666 99999999999975
Q ss_pred cccccccCCeeEEEeC-CC--cEEEeeE-EEecCCCchh
Q 010225 215 ATTLFTKGHLAKLDLS-DG--TSLYAKL-VGADGGKSRV 249 (514)
Q Consensus 215 ~~~~~~~~~~~~v~~~-~g--~~~~ad~-V~AdG~~S~v 249 (514)
+++.+.+.+. +| +++.||. |.|.|.....
T Consensus 241 ------~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~ 273 (464)
T 2a8x_A 241 ------GGSQVTVTVTKDGVAQELKAEKVLQAIGFAPNV 273 (464)
T ss_dssp ------CSSCEEEEEESSSCEEEEEESEEEECSCEEECC
T ss_pred ------cCCeEEEEEEcCCceEEEEcCEEEECCCCCccC
Confidence 2334666664 56 5799999 9999976543
No 225
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.69 E-value=0.00012 Score=76.04 Aligned_cols=103 Identities=15% Similarity=0.206 Sum_probs=76.9
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhhh
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (514)
..+|+|||||..|+-+|..|++.. ..|.+|+|+|+.+.+. . .+
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~-~~g~~Vtlv~~~~~~l----------~------------------~~-------- 233 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYK-PPGGKVTLCYRNNLIL----------R------------------GF-------- 233 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHC-CTTCEEEEEESSSSSC----------T------------------TS--------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhC-CCCCeEEEEEcCCccc----------c------------------cc--------
Confidence 458999999999999999998840 0188999999987540 0 00
Q ss_pred ccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCc
Q 010225 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (514)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~ 214 (514)
-..+.+.+.+.+++.| ++++++++|++++.
T Consensus 234 -----------------------------------d~~~~~~l~~~l~~~G-V~i~~~~~v~~i~~-------------- 263 (495)
T 2wpf_A 234 -----------------------------------DETIREEVTKQLTANG-IEIMTNENPAKVSL-------------- 263 (495)
T ss_dssp -----------------------------------CHHHHHHHHHHHHHTT-CEEEESCCEEEEEE--------------
T ss_pred -----------------------------------CHHHHHHHHHHHHhCC-CEEEeCCEEEEEEE--------------
Confidence 0123455666677777 99999999999976
Q ss_pred cccccccCCeeEEEeCCCcEEEeeE-EEecCCCchh
Q 010225 215 ATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKSRV 249 (514)
Q Consensus 215 ~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S~v 249 (514)
+.++.+.|.+.+|+++.||. |.|.|....+
T Consensus 264 -----~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~ 294 (495)
T 2wpf_A 264 -----NTDGSKHVTFESGKTLDVDVVMMAIGRIPRT 294 (495)
T ss_dssp -----CTTSCEEEEETTSCEEEESEEEECSCEEECC
T ss_pred -----cCCceEEEEECCCcEEEcCEEEECCCCcccc
Confidence 11234778888998999999 9999986654
No 226
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.69 E-value=0.00024 Score=73.62 Aligned_cols=111 Identities=17% Similarity=0.259 Sum_probs=78.6
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhhh
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (514)
..+|+|||||..|+-+|..|++.+.+.|.+|+++++.+.+. . +
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~----------~--~------------------------- 222 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNM----------G--K------------------------- 222 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTT----------T--T-------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccc----------c--c-------------------------
Confidence 35799999999999999998762100168899999776320 0 0
Q ss_pred ccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCc
Q 010225 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (514)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~ 214 (514)
.+ ...+...+.+.+++.| |+++++++|++++.
T Consensus 223 --~l-------------------------------~~~~~~~~~~~l~~~G-V~v~~~~~V~~i~~-------------- 254 (493)
T 1m6i_A 223 --IL-------------------------------PEYLSNWTMEKVRREG-VKVMPNAIVQSVGV-------------- 254 (493)
T ss_dssp --TS-------------------------------CHHHHHHHHHHHHTTT-CEEECSCCEEEEEE--------------
T ss_pred --cC-------------------------------CHHHHHHHHHHHHhcC-CEEEeCCEEEEEEe--------------
Confidence 00 0234455667777777 99999999999975
Q ss_pred cccccccCCeeEEEeCCCcEEEeeE-EEecCCCch--hhhhhCCC
Q 010225 215 ATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKSR--VRELAGFK 256 (514)
Q Consensus 215 ~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S~--vR~~l~~~ 256 (514)
.++.+.|.+.+|+++.||+ |.|.|.... +-+.++..
T Consensus 255 ------~~~~~~v~l~dG~~i~aD~Vv~a~G~~pn~~l~~~~gl~ 293 (493)
T 1m6i_A 255 ------SSGKLLIKLKDGRKVETDHIVAAVGLEPNVELAKTGGLE 293 (493)
T ss_dssp ------ETTEEEEEETTSCEEEESEEEECCCEEECCTTHHHHTCC
T ss_pred ------cCCeEEEEECCCCEEECCEEEECCCCCccHHHHHHcCCc
Confidence 3355678889999999999 999997654 33444544
No 227
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.68 E-value=2.6e-05 Score=80.02 Aligned_cols=38 Identities=26% Similarity=0.367 Sum_probs=34.4
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
...+||+||||||+|+++|+.|++. |++|+|||+.+.+
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~----G~~V~v~e~~~~~ 157 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAK----GYEVHVYDRYDRM 157 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHH----TCCEEEECSSSSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHC----CCeEEEEeccCCC
Confidence 3568999999999999999999996 9999999998755
No 228
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.66 E-value=0.00018 Score=74.35 Aligned_cols=99 Identities=17% Similarity=0.291 Sum_probs=75.2
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhhh
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (514)
..+|+|||||+.|+-+|..|++. |.+|+++|+.+.+. . .+
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~----g~~Vtlv~~~~~~l----------~-----~~--------------------- 219 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARL----GAEVTVLEAMDKFL----------P-----AV--------------------- 219 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT----TCEEEEEESSSSSS----------T-----TS---------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc----CCcEEEEecCCCcC----------c-----cc---------------------
Confidence 46899999999999999999996 99999999987430 0 00
Q ss_pred ccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCc
Q 010225 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (514)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~ 214 (514)
-..+...+.+.+++.| ++++++++|++++.
T Consensus 220 -----------------------------------~~~~~~~l~~~l~~~G-v~v~~~~~v~~i~~-------------- 249 (476)
T 3lad_A 220 -----------------------------------DEQVAKEAQKILTKQG-LKILLGARVTGTEV-------------- 249 (476)
T ss_dssp -----------------------------------CHHHHHHHHHHHHHTT-EEEEETCEEEEEEE--------------
T ss_pred -----------------------------------CHHHHHHHHHHHHhCC-CEEEECCEEEEEEE--------------
Confidence 0124455666777777 99999999999986
Q ss_pred cccccccCCeeEEEeCCC---cEEEeeE-EEecCCCchh
Q 010225 215 ATTLFTKGHLAKLDLSDG---TSLYAKL-VGADGGKSRV 249 (514)
Q Consensus 215 ~~~~~~~~~~~~v~~~~g---~~~~ad~-V~AdG~~S~v 249 (514)
.++.+.+.+.++ .++.+|. |.|.|.....
T Consensus 250 ------~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~p~~ 282 (476)
T 3lad_A 250 ------KNKQVTVKFVDAEGEKSQAFDKLIVAVGRRPVT 282 (476)
T ss_dssp ------CSSCEEEEEESSSEEEEEEESEEEECSCEEECC
T ss_pred ------cCCEEEEEEEeCCCcEEEECCEEEEeeCCcccC
Confidence 334566666654 5799999 9999976544
No 229
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.65 E-value=2.6e-05 Score=81.18 Aligned_cols=34 Identities=38% Similarity=0.589 Sum_probs=32.1
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
++||+|||||++|+++|..|++. |++|+|||++.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~----g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARH----NAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT----TCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHHC----CCcEEEEeCCC
Confidence 58999999999999999999996 99999999985
No 230
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.60 E-value=3.7e-05 Score=80.48 Aligned_cols=38 Identities=29% Similarity=0.469 Sum_probs=33.5
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
.+||+||||||++|+.+|..|++. .|++|+|||++...
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~---~~~~VLvLEaG~~~ 53 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSED---PDSRVLLIEAGEEP 53 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTS---TTSCEEEECSSBCC
T ss_pred CCeeEEEECccHHHHHHHHHHHhC---CCCeEEEEcCCCCC
Confidence 479999999999999999999985 38999999998653
No 231
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.59 E-value=0.00041 Score=67.71 Aligned_cols=36 Identities=25% Similarity=0.408 Sum_probs=32.1
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
..+|+|||+|..|+-+|..|++. |.+|+++++.+.+
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~----g~~V~~v~~~~~~ 187 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDT----ARRITLIHRRPQF 187 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTT----SSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhh----CCEEEEEEcCCcc
Confidence 45899999999999999999996 8999999988743
No 232
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.55 E-value=4.2e-05 Score=80.51 Aligned_cols=37 Identities=24% Similarity=0.373 Sum_probs=33.5
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCC
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~ 93 (514)
...|||||||||++|+++|+.|++. |++|+|+|++..
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~~----g~~VlvlE~g~~ 41 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSEA----GKKVLLLERGGP 41 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHT----TCCEEEECSSCC
T ss_pred CCceeEEEECcCHHHHHHHHHHHhC----CCeEEEEeCCCC
Confidence 3579999999999999999999996 999999999864
No 233
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.54 E-value=0.0004 Score=71.83 Aligned_cols=99 Identities=14% Similarity=0.089 Sum_probs=72.8
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhhh
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (514)
..+|+|||||..|+-+|..|++. |.+|+|+++..... . +.
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~----g~~Vtlv~~~~~l~----------~------~d-------------------- 226 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGL----GYEPTVMVRSIVLR----------G------FD-------------------- 226 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT----TCEEEEEESSCSST----------T------SC--------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHHc----CCEEEEEeCCCCCc----------c------cC--------------------
Confidence 35799999999999999999997 99999999853220 0 00
Q ss_pred ccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCc
Q 010225 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (514)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~ 214 (514)
..+.+.+.+.+++.| ++++++++|++++.
T Consensus 227 ------------------------------------~~~~~~l~~~l~~~G-v~i~~~~~v~~i~~-------------- 255 (483)
T 3dgh_A 227 ------------------------------------QQMAELVAASMEERG-IPFLRKTVPLSVEK-------------- 255 (483)
T ss_dssp ------------------------------------HHHHHHHHHHHHHTT-CCEEETEEEEEEEE--------------
T ss_pred ------------------------------------HHHHHHHHHHHHhCC-CEEEeCCEEEEEEE--------------
Confidence 124455667777777 99999999999975
Q ss_pred cccccccCCeeEEEeCCCc-----EEEeeE-EEecCCCchh
Q 010225 215 ATTLFTKGHLAKLDLSDGT-----SLYAKL-VGADGGKSRV 249 (514)
Q Consensus 215 ~~~~~~~~~~~~v~~~~g~-----~~~ad~-V~AdG~~S~v 249 (514)
+.++.+.|.+.++. ++.+|. |.|.|.....
T Consensus 256 -----~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~~ 291 (483)
T 3dgh_A 256 -----QDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLV 291 (483)
T ss_dssp -----CTTSCEEEEEEETTTCCEEEEEESEEEECSCEEECC
T ss_pred -----cCCCcEEEEEecCCCCceeEEEcCEEEECcccccCc
Confidence 12234566665543 799999 9999975443
No 234
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.52 E-value=0.00028 Score=72.53 Aligned_cols=99 Identities=12% Similarity=0.204 Sum_probs=76.7
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhhh
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (514)
..+|+|||||+.|+-+|..|++. |.+|+++|+.+.+. . . +
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~----g~~Vt~v~~~~~~l----------~---------~---------~-------- 209 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGL----GVKTTLIYRGKEIL----------S---------R---------F-------- 209 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSSSSS----------T---------T---------S--------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc----CCeEEEEEcCCccc----------c---------c---------c--------
Confidence 46899999999999999999996 89999999887440 0 0 0
Q ss_pred ccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCc
Q 010225 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (514)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~ 214 (514)
-..+.+.+.+.+++.| ++++++++|++++.
T Consensus 210 -----------------------------------~~~~~~~l~~~l~~~G-v~i~~~~~v~~i~~-------------- 239 (463)
T 4dna_A 210 -----------------------------------DQDMRRGLHAAMEEKG-IRILCEDIIQSVSA-------------- 239 (463)
T ss_dssp -----------------------------------CHHHHHHHHHHHHHTT-CEEECSCCEEEEEE--------------
T ss_pred -----------------------------------CHHHHHHHHHHHHHCC-CEEECCCEEEEEEE--------------
Confidence 0124466677777777 99999999999976
Q ss_pred cccccccCCeeEEE-eCCCcEEEeeE-EEecCCCchh
Q 010225 215 ATTLFTKGHLAKLD-LSDGTSLYAKL-VGADGGKSRV 249 (514)
Q Consensus 215 ~~~~~~~~~~~~v~-~~~g~~~~ad~-V~AdG~~S~v 249 (514)
+.++.+.|. +.+|+ +.||. |.|.|.....
T Consensus 240 -----~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p~~ 270 (463)
T 4dna_A 240 -----DADGRRVATTMKHGE-IVADQVMLALGRMPNT 270 (463)
T ss_dssp -----CTTSCEEEEESSSCE-EEESEEEECSCEEESC
T ss_pred -----cCCCEEEEEEcCCCe-EEeCEEEEeeCcccCC
Confidence 112336788 88888 99999 9999986544
No 235
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.50 E-value=4.3e-05 Score=78.57 Aligned_cols=34 Identities=18% Similarity=0.376 Sum_probs=31.5
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSN 91 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~ 91 (514)
.++||+||||||+|+++|..|++. |++|+|||++
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~----g~~V~lie~~ 37 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQL----GIPTVLVEGQ 37 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHH----TCCEEEECSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC----CCEEEEEccC
Confidence 458999999999999999999996 9999999994
No 236
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.49 E-value=0.0004 Score=67.69 Aligned_cols=36 Identities=25% Similarity=0.243 Sum_probs=32.5
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
..+|+|||+|+.|+-+|..|++. |.+|+++++.+.+
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~~----g~~v~~v~~~~~~ 208 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTKY----GSKVFMLVRKDHL 208 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTT----SSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhc----CCEEEEEEcCCcc
Confidence 46799999999999999999996 8999999988754
No 237
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.48 E-value=0.00033 Score=74.39 Aligned_cols=97 Identities=15% Similarity=0.363 Sum_probs=74.7
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhhh
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (514)
..+|+|||||..|+-+|..|++. |.+|+++|+.+.+. . .+
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~----g~~Vtlv~~~~~~l----------~-----~~--------------------- 226 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRER----GIEVTLVEMANQVM----------P-----PI--------------------- 226 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSSSSC----------T-----TS---------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhC----CCeEEEEecCCccc----------c-----cC---------------------
Confidence 45899999999999999999996 99999999887541 0 00
Q ss_pred ccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCc
Q 010225 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (514)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~ 214 (514)
...+...+.+.+++.| ++++++++|++++.
T Consensus 227 -----------------------------------~~~~~~~l~~~l~~~G-V~i~~~~~v~~i~~-------------- 256 (588)
T 3ics_A 227 -----------------------------------DYEMAAYVHEHMKNHD-VELVFEDGVDALEE-------------- 256 (588)
T ss_dssp -----------------------------------CHHHHHHHHHHHHHTT-CEEECSCCEEEEEG--------------
T ss_pred -----------------------------------CHHHHHHHHHHHHHcC-CEEEECCeEEEEec--------------
Confidence 0123455666677777 99999999999975
Q ss_pred cccccccCCeeEEEeCCCcEEEeeE-EEecCCCchh
Q 010225 215 ATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKSRV 249 (514)
Q Consensus 215 ~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S~v 249 (514)
.++ .|.+.+|+++.||. |.|.|.....
T Consensus 257 ------~~~--~v~~~~g~~i~~D~Vi~a~G~~p~~ 284 (588)
T 3ics_A 257 ------NGA--VVRLKSGSVIQTDMLILAIGVQPES 284 (588)
T ss_dssp ------GGT--EEEETTSCEEECSEEEECSCEEECC
T ss_pred ------CCC--EEEECCCCEEEcCEEEEccCCCCCh
Confidence 222 46678898999999 9999976543
No 238
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.46 E-value=0.00071 Score=66.94 Aligned_cols=107 Identities=16% Similarity=0.174 Sum_probs=71.4
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhhh
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (514)
..+|+|||||.+|+-+|..|++. |.+|+++++.+... .+. +
T Consensus 166 ~~~vvVvG~G~~g~e~a~~l~~~----g~~V~lv~~~~~~~------------------~~~-------~---------- 206 (369)
T 3d1c_A 166 KGQYVVIGGNESGFDAAYQLAKN----GSDIALYTSTTGLN------------------DPD-------A---------- 206 (369)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHT----TCEEEEECC--------------------------------------------
T ss_pred CCEEEEECCCcCHHHHHHHHHhc----CCeEEEEecCCCCC------------------CCC-------C----------
Confidence 34899999999999999999996 89999999987441 000 0
Q ss_pred ccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCc
Q 010225 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (514)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~ 214 (514)
+... . -...+.+.+.+.+++.|+++++.+++|++++.
T Consensus 207 ----------d~~~----~---------------~~~~~~~~l~~~l~~~g~v~~~~~~~v~~i~~-------------- 243 (369)
T 3d1c_A 207 ----------DPSV----R---------------LSPYTRQRLGNVIKQGARIEMNVHYTVKDIDF-------------- 243 (369)
T ss_dssp -----------CTT----S---------------CCHHHHHHHHHHHHTTCCEEEECSCCEEEEEE--------------
T ss_pred ----------CCCc----c---------------CCHHHHHHHHHHHhhCCcEEEecCcEEEEEEe--------------
Confidence 0000 0 01234455556666553399999999999964
Q ss_pred cccccccCCeeEEEeCCCcEEE-eeE-EEecCCCchh
Q 010225 215 ATTLFTKGHLAKLDLSDGTSLY-AKL-VGADGGKSRV 249 (514)
Q Consensus 215 ~~~~~~~~~~~~v~~~~g~~~~-ad~-V~AdG~~S~v 249 (514)
.++.+.|.+.+|+++. +|. |.|.|.....
T Consensus 244 ------~~~~~~v~~~~g~~~~~~d~vi~a~G~~~~~ 274 (369)
T 3d1c_A 244 ------NNGQYHISFDSGQSVHTPHEPILATGFDATK 274 (369)
T ss_dssp ------ETTEEEEEESSSCCEEESSCCEECCCBCGGG
T ss_pred ------cCCceEEEecCCeEeccCCceEEeeccCCcc
Confidence 2355678888888665 599 9999975443
No 239
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.45 E-value=9.6e-05 Score=80.49 Aligned_cols=38 Identities=24% Similarity=0.343 Sum_probs=34.5
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
...+||+||||||+|+++|+.|++. |++|+|||+.+.+
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~----G~~Vtlie~~~~~ 424 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMES----GYTVHLTDTAEKI 424 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSSST
T ss_pred cCCceEEEECCCHHHHHHHHHHHHC----CCeEEEEeCCCCc
Confidence 4568999999999999999999996 9999999998755
No 240
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.44 E-value=0.00031 Score=71.66 Aligned_cols=93 Identities=15% Similarity=0.232 Sum_probs=70.8
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhhh
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (514)
..+|+|||||+.|+-+|..|++. |.+|+|+|+.+.+. .
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~----g~~Vtlv~~~~~ll----------~---------------------------- 184 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYER----GLHPTLIHRSDKIN----------K---------------------------- 184 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH----TCEEEEEESSSCCS----------T----------------------------
T ss_pred CcEEEEECCccchhhhHHHHHhc----CCcceeeeeecccc----------c----------------------------
Confidence 34799999999999999999996 99999999987441 0
Q ss_pred ccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCc
Q 010225 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (514)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~ 214 (514)
.. + ..+.+.+.+.+++.| ++++++++|++++.
T Consensus 185 --~~------d-------------------------~~~~~~~~~~l~~~g-V~i~~~~~v~~~~~-------------- 216 (437)
T 4eqs_A 185 --LM------D-------------------------ADMNQPILDELDKRE-IPYRLNEEINAING-------------- 216 (437)
T ss_dssp --TS------C-------------------------GGGGHHHHHHHHHTT-CCEEESCCEEEEET--------------
T ss_pred --cc------c-------------------------chhHHHHHHHhhccc-eEEEeccEEEEecC--------------
Confidence 00 0 001234555666667 99999999998853
Q ss_pred cccccccCCeeEEEeCCCcEEEeeE-EEecCCCc
Q 010225 215 ATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKS 247 (514)
Q Consensus 215 ~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S 247 (514)
..+.+++|+++.||+ |.|.|...
T Consensus 217 ----------~~v~~~~g~~~~~D~vl~a~G~~P 240 (437)
T 4eqs_A 217 ----------NEITFKSGKVEHYDMIIEGVGTHP 240 (437)
T ss_dssp ----------TEEEETTSCEEECSEEEECCCEEE
T ss_pred ----------CeeeecCCeEEeeeeEEEEeceec
Confidence 246778999999999 99999654
No 241
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=97.43 E-value=8.8e-05 Score=78.18 Aligned_cols=37 Identities=30% Similarity=0.558 Sum_probs=33.7
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
...||+||||||.||+++|..|++. .+.+|+|||++.
T Consensus 17 ~~~yDyIIVGgG~AG~vlA~RLse~---~~~~VLlLEaG~ 53 (583)
T 3qvp_A 17 GRTVDYIIAGGGLTGLTTAARLTEN---PNISVLVIESGS 53 (583)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHTTS---TTCCEEEECSSC
T ss_pred CCCccEEEECCcHHHHHHHHHHHhC---CCCcEEEEecCC
Confidence 4579999999999999999999985 389999999988
No 242
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.42 E-value=0.00011 Score=79.23 Aligned_cols=40 Identities=25% Similarity=0.507 Sum_probs=35.8
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCC
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGK 96 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~ 96 (514)
...+||+|||||++||++|+.|++. |++|+|+|+.+.++.
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~----g~~v~~~e~~~~~gg 144 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSF----GMDVTLLEARDRVGG 144 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHT----TCEEEEECSSSSSBT
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHC----CCeEEEEecCCCCCC
Confidence 4568999999999999999999996 999999999887653
No 243
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.42 E-value=0.00028 Score=72.42 Aligned_cols=145 Identities=11% Similarity=0.062 Sum_probs=79.3
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhh
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQH 133 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~ 133 (514)
...+|+|||||.+|+=+|..|++.. .|.+|+++++.+.+... ...........+...+.+..+.. .....
T Consensus 226 ~~~~vvVvGgG~sg~e~a~~l~~~~--~~~~Vt~v~r~~~~~p~------~~~~~~~~~~~p~~~~~~~~l~~--~~~~~ 295 (463)
T 3s5w_A 226 KPMKIAIIGGGQSAAEAFIDLNDSY--PSVQADMILRASALKPA------DDSPFVNEVFAPKFTDLIYSREH--AERER 295 (463)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHHC--TTEEEEEECSSSSCCBC------CCCHHHHGGGSHHHHHHHHHSCH--HHHHH
T ss_pred CCCeEEEECCCHhHHHHHHHHHhcC--CCCeEEEEEeCCCCcCc------cCCccchhccChhHHHHHhcCCH--HHHHH
Confidence 3568999999999999999999841 27899999998854110 00000001122333333333321 11110
Q ss_pred hccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCC
Q 010225 134 RHAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTP 213 (514)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~ 213 (514)
...... ........ ..+-......++.+.+....+++++.+++|++++.
T Consensus 296 ~~~~~~------~~~~~~~~------------~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~------------- 344 (463)
T 3s5w_A 296 LLREYH------NTNYSVVD------------TDLIERIYGVFYRQKVSGIPRHAFRCMTTVERATA------------- 344 (463)
T ss_dssp HHHHTG------GGTSSCBC------------HHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEE-------------
T ss_pred HHHHhh------ccCCCcCC------------HHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEe-------------
Confidence 000000 00000000 00112233344444454434599999999999976
Q ss_pred ccccccccCCeeEEEeC---CCc--EEEeeE-EEecCCC
Q 010225 214 SATTLFTKGHLAKLDLS---DGT--SLYAKL-VGADGGK 246 (514)
Q Consensus 214 ~~~~~~~~~~~~~v~~~---~g~--~~~ad~-V~AdG~~ 246 (514)
.++.+.|.+. +|+ ++.+|+ |.|+|..
T Consensus 345 -------~~~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~ 376 (463)
T 3s5w_A 345 -------TAQGIELALRDAGSGELSVETYDAVILATGYE 376 (463)
T ss_dssp -------ETTEEEEEEEETTTCCEEEEEESEEEECCCEE
T ss_pred -------cCCEEEEEEEEcCCCCeEEEECCEEEEeeCCC
Confidence 4456777765 665 499999 9999964
No 244
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.42 E-value=0.00015 Score=78.19 Aligned_cols=38 Identities=29% Similarity=0.470 Sum_probs=34.5
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
...+||+||||||+|+++|..|++. |++|+|||+.+..
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~~----g~~V~lie~~~~~ 408 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAAR----GHQVTLFDAHSEI 408 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTT----TCEEEEEESSSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhC----CCeEEEEeCCCCC
Confidence 4568999999999999999999996 9999999998765
No 245
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.42 E-value=0.0001 Score=77.76 Aligned_cols=38 Identities=32% Similarity=0.636 Sum_probs=33.8
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCC
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~ 93 (514)
...||+||||||.||+++|..|++.+ +.+|+|||++..
T Consensus 4 ~~~yDyIVVGgG~AG~v~A~rLse~~---~~~VLllEaG~~ 41 (577)
T 3q9t_A 4 GSHFDFVIVGGGTAGNTVAGRLAENP---NVTVLIVEAGIG 41 (577)
T ss_dssp TCEEEEEEESCSHHHHHHHHHHTTST---TSCEEEECSSCS
T ss_pred CCcccEEEECCcHHHHHHHHHHHhCC---CCcEEEEecCCC
Confidence 35699999999999999999999972 489999999876
No 246
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.39 E-value=0.00052 Score=70.83 Aligned_cols=100 Identities=9% Similarity=0.052 Sum_probs=73.7
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhhh
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (514)
..+|+|||||..|+-+|..|++. |.+|+|+++.+.+. . .+
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~----g~~Vtlv~~~~~~l----------~------------------~~-------- 226 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSAL----GSKTSLMIRHDKVL----------R------------------SF-------- 226 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSSSSC----------T------------------TS--------
T ss_pred CccEEEECCCHHHHHHHHHHHHc----CCeEEEEEeCCccc----------c------------------cc--------
Confidence 46899999999999999999997 99999999887540 0 00
Q ss_pred ccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCc
Q 010225 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (514)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~ 214 (514)
-..+.+.+.+.+++.| ++++++++|++++..
T Consensus 227 -----------------------------------d~~~~~~~~~~l~~~g-v~i~~~~~v~~i~~~------------- 257 (478)
T 3dk9_A 227 -----------------------------------DSMISTNCTEELENAG-VEVLKFSQVKEVKKT------------- 257 (478)
T ss_dssp -----------------------------------CHHHHHHHHHHHHHTT-CEEETTEEEEEEEEC-------------
T ss_pred -----------------------------------CHHHHHHHHHHHHHCC-CEEEeCCEEEEEEEc-------------
Confidence 0113455666667777 999999999999760
Q ss_pred cccccccCC-eeEEEeCC---C----cEEEeeE-EEecCCCchh
Q 010225 215 ATTLFTKGH-LAKLDLSD---G----TSLYAKL-VGADGGKSRV 249 (514)
Q Consensus 215 ~~~~~~~~~-~~~v~~~~---g----~~~~ad~-V~AdG~~S~v 249 (514)
.++ .+.+.+.+ | .++.+|. |.|.|.....
T Consensus 258 ------~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~ 295 (478)
T 3dk9_A 258 ------LSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNT 295 (478)
T ss_dssp ------SSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEESC
T ss_pred ------CCCcEEEEEEccCCCCcccceEEEcCEEEEeeccccCC
Confidence 112 46677765 2 5799999 9999975443
No 247
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.39 E-value=0.00044 Score=68.38 Aligned_cols=35 Identities=23% Similarity=0.348 Sum_probs=31.6
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~ 93 (514)
..+|+|||+|++|+-+|..|++. |.+|+++++.+.
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~~----g~~V~lv~~~~~ 197 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIKN----AASVTLVHRGHE 197 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTT----SSEEEEECSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhc----CCEEEEEEcCCC
Confidence 35899999999999999999996 899999998764
No 248
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.39 E-value=0.0011 Score=63.76 Aligned_cols=36 Identities=31% Similarity=0.414 Sum_probs=32.1
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
..+|+|||+|+.|+-+|..|++. |.+|+++++.+.+
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~----g~~Vtlv~~~~~~ 178 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANI----CKKVYLIHRRDGF 178 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTT----SSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhc----CCEEEEEeeCCcc
Confidence 46899999999999999999996 8999999987643
No 249
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.39 E-value=8.4e-05 Score=79.15 Aligned_cols=35 Identities=31% Similarity=0.474 Sum_probs=32.2
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCC
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSN 91 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~ 91 (514)
...+||+||||||+|+++|..|++. |++|+|||+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~----g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKY----GAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHT----TCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhC----CCeEEEEecc
Confidence 4569999999999999999999996 9999999984
No 250
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.39 E-value=0.0013 Score=63.84 Aligned_cols=36 Identities=25% Similarity=0.350 Sum_probs=32.0
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
..+|+|||+|+.|+-+|..|++. |.+|+++++.+.+
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~~----g~~Vtlv~~~~~~ 187 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTKF----ADEVTVIHRRDTL 187 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTT----CSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhc----CCEEEEEeCCCcC
Confidence 35899999999999999999996 8999999987643
No 251
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.38 E-value=0.00014 Score=79.98 Aligned_cols=40 Identities=25% Similarity=0.507 Sum_probs=35.8
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCC
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGK 96 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~ 96 (514)
...++|+|||||++||++|+.|++. |++|+|||+.+.++.
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~----g~~v~v~E~~~~~GG 315 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSF----GMDVTLLEARDRVGG 315 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSSSSCT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHC----CCcEEEEEecCcCCC
Confidence 3467999999999999999999996 999999999987753
No 252
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.29 E-value=0.00079 Score=69.65 Aligned_cols=99 Identities=14% Similarity=0.109 Sum_probs=71.7
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhhh
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (514)
..+|+|||||..|+-+|..|++. |.+|+|+++..... . +
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~----g~~Vtlv~~~~~l~----------~-------------------~-------- 223 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGI----GLDTTVMMRSIPLR----------G-------------------F-------- 223 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT----TCCEEEEESSCSST----------T-------------------S--------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc----CCceEEEEcCcccc----------c-------------------C--------
Confidence 35799999999999999999996 99999999864220 0 0
Q ss_pred ccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCc
Q 010225 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (514)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~ 214 (514)
-..+.+.+.+.+++.| +++++++++++++.
T Consensus 224 -----------------------------------d~~~~~~l~~~l~~~g-v~~~~~~~v~~i~~-------------- 253 (488)
T 3dgz_A 224 -----------------------------------DQQMSSLVTEHMESHG-TQFLKGCVPSHIKK-------------- 253 (488)
T ss_dssp -----------------------------------CHHHHHHHHHHHHHTT-CEEEETEEEEEEEE--------------
T ss_pred -----------------------------------CHHHHHHHHHHHHHCC-CEEEeCCEEEEEEE--------------
Confidence 0124455667777777 99999999999975
Q ss_pred cccccccCCeeEEEeCC---Cc--EEEeeE-EEecCCCchh
Q 010225 215 ATTLFTKGHLAKLDLSD---GT--SLYAKL-VGADGGKSRV 249 (514)
Q Consensus 215 ~~~~~~~~~~~~v~~~~---g~--~~~ad~-V~AdG~~S~v 249 (514)
..++.+.+.+.+ |+ ++.+|. |.|.|.....
T Consensus 254 -----~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~ 289 (488)
T 3dgz_A 254 -----LPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPET 289 (488)
T ss_dssp -----CTTSCEEEEEEETTTTEEEEEEESEEEECSCEEESC
T ss_pred -----cCCCcEEEEEEeCCCCeeEEEECCEEEEcccCCccc
Confidence 122345555543 54 478999 9999975443
No 253
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.29 E-value=0.0012 Score=67.46 Aligned_cols=105 Identities=18% Similarity=0.233 Sum_probs=74.5
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhhh
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (514)
..+|+|||||..|+-+|..|++. |.+|+|+|+.+.+. ..
T Consensus 148 ~~~vvViGgG~~g~E~A~~l~~~----g~~Vtlv~~~~~~l----------~~--------------------------- 186 (449)
T 3kd9_A 148 VENVVIIGGGYIGIEMAEAFAAQ----GKNVTMIVRGERVL----------RR--------------------------- 186 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT----TCEEEEEESSSSTT----------TT---------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhC----CCeEEEEEcCCccc----------hh---------------------------
Confidence 35899999999999999999996 99999999987541 00
Q ss_pred ccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCc
Q 010225 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (514)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~ 214 (514)
.+ -..+...+.+.+++. ++++++++|++++.
T Consensus 187 --~~-------------------------------~~~~~~~l~~~l~~~--v~i~~~~~v~~i~~-------------- 217 (449)
T 3kd9_A 187 --SF-------------------------------DKEVTDILEEKLKKH--VNLRLQEITMKIEG-------------- 217 (449)
T ss_dssp --TS-------------------------------CHHHHHHHHHHHTTT--SEEEESCCEEEEEC--------------
T ss_pred --hc-------------------------------CHHHHHHHHHHHHhC--cEEEeCCeEEEEec--------------
Confidence 00 023455666666654 89999999999975
Q ss_pred cccccccCCeeEEEeCCCcEEEeeE-EEecCCCch--hhhhhCCC
Q 010225 215 ATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKSR--VRELAGFK 256 (514)
Q Consensus 215 ~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S~--vR~~l~~~ 256 (514)
.+ .+...+.++.++.||. |.|.|.... +-+.++..
T Consensus 218 ------~~-~v~~v~~~g~~i~~D~Vv~a~G~~p~~~l~~~~gl~ 255 (449)
T 3kd9_A 218 ------EE-RVEKVVTDAGEYKAELVILATGIKPNIELAKQLGVR 255 (449)
T ss_dssp ------SS-SCCEEEETTEEEECSEEEECSCEEECCHHHHHTTCC
T ss_pred ------cC-cEEEEEeCCCEEECCEEEEeeCCccCHHHHHhCCcc
Confidence 22 2333345777899999 999997643 33344443
No 254
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.28 E-value=0.0001 Score=77.25 Aligned_cols=37 Identities=30% Similarity=0.609 Sum_probs=33.3
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
..+||+||||||.+|+.+|..|++ |.+|+|||++...
T Consensus 24 ~~~yD~IIVGsG~AG~v~A~rLse-----g~~VlvLEaG~~~ 60 (536)
T 1ju2_A 24 EGSYDYVIVGGGTSGCPLAATLSE-----KYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEEEECCSTTHHHHHHHHTT-----TSCEEEECSSBCG
T ss_pred cCcccEEEECccHHHHHHHHHHhc-----CCcEEEEecCCCc
Confidence 356999999999999999999998 6899999999654
No 255
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.27 E-value=0.0014 Score=63.41 Aligned_cols=35 Identities=31% Similarity=0.436 Sum_probs=31.3
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~ 93 (514)
..+|+|||||+.|+-+|..|++. |.+|+++++.+.
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~~~----g~~V~~i~~~~~ 189 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMSEY----VKNVTIIEYMPK 189 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTT----BSEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhh----CCcEEEEEcCCc
Confidence 35799999999999999999996 899999998763
No 256
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.23 E-value=0.0015 Score=62.95 Aligned_cols=35 Identities=34% Similarity=0.528 Sum_probs=31.5
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~ 93 (514)
..+|+|||+|++|+-+|..|++. |.+|+++++.+.
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~~----g~~Vtlv~~~~~ 178 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAGI----VEHVTLLEFAPE 178 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT----BSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHh----CCEEEEEEeCcc
Confidence 35899999999999999999996 899999998774
No 257
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.22 E-value=0.00019 Score=73.74 Aligned_cols=37 Identities=27% Similarity=0.330 Sum_probs=32.9
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCC--cEEEEEcCCCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKH--LSVAIIDSNPAL 94 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g--~~V~viE~~~~~ 94 (514)
..+||+||||||+|+.+|..|++. | ++|+|||+.+.+
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~----g~~~~V~vie~~~~~ 43 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKH----HSRAHVDIYEKQLVP 43 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHH----CSSCEEEEECSSSSS
T ss_pred CCceEEEECcCHHHHHHHHHHHhc----CCCCCEEEEeCCCcC
Confidence 357999999999999999999996 6 999999998855
No 258
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=97.20 E-value=0.00015 Score=76.32 Aligned_cols=37 Identities=27% Similarity=0.454 Sum_probs=33.5
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
.||+||||||.+|+.+|..|++. .+.+|+|||++...
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~---~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTED---PDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTS---TTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhC---cCCcEEEEecCCcc
Confidence 58999999999999999999985 38999999998754
No 259
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.15 E-value=0.00023 Score=80.44 Aligned_cols=37 Identities=19% Similarity=0.342 Sum_probs=33.4
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCc-EEEEEcCCCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNPAL 94 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~-~V~viE~~~~~ 94 (514)
..+||+||||||+|+++|+.|++. |+ +|+|||+.+.+
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~----G~~~Vtv~E~~~~~ 223 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARL----GYSDITIFEKQEYV 223 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHT----TCCCEEEEESSSSC
T ss_pred CCCEEEEECccHHHHHHHHHHHhc----CCCcEEEEeCCCCC
Confidence 357999999999999999999997 88 79999998755
No 260
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.14 E-value=0.0002 Score=73.43 Aligned_cols=41 Identities=24% Similarity=0.358 Sum_probs=33.2
Q ss_pred CCccEEEECCCHHHHHHHHHhcc-CC--CCCCcEEEEEcCCCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLAS-MP--LTKHLSVAIIDSNPAL 94 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~-~~--~~~g~~V~viE~~~~~ 94 (514)
.++||+||||||+|+++|..|++ .. ...|++|+|||+.+.+
T Consensus 2 ~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~ 45 (456)
T 1lqt_A 2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTP 45 (456)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSC
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCC
Confidence 35799999999999999999988 41 0017999999998754
No 261
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.11 E-value=0.0024 Score=62.15 Aligned_cols=36 Identities=33% Similarity=0.360 Sum_probs=32.2
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
..+|+|||+|..|+-+|..|++. |.+|+++++.+.+
T Consensus 159 ~~~v~VvG~G~~g~e~A~~l~~~----g~~V~lv~~~~~~ 194 (333)
T 1vdc_A 159 NKPLAVIGGGDSAMEEANFLTKY----GSKVYIIHRRDAF 194 (333)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTT----SSEEEEECSSSSC
T ss_pred CCeEEEECCChHHHHHHHHHHhc----CCeEEEEecCCcC
Confidence 46899999999999999999996 8999999988743
No 262
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.10 E-value=0.0002 Score=76.65 Aligned_cols=36 Identities=33% Similarity=0.719 Sum_probs=33.0
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCC--------cEEEEEcCCC-CC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKH--------LSVAIIDSNP-AL 94 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g--------~~V~viE~~~-~~ 94 (514)
..+|+|||||++||++|+.|++. | ++|+|||+++ .+
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~----g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRL----AATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH----HTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHc----CcccccCCCceEEEEeccCccc
Confidence 47899999999999999999986 7 9999999998 66
No 263
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.10 E-value=0.0024 Score=61.38 Aligned_cols=36 Identities=28% Similarity=0.414 Sum_probs=32.1
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
..+|+|||+|+.|+-+|..|++. |.+|+++++.+.+
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~----g~~v~~~~~~~~~ 182 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANI----CSKIYLIHRRDEF 182 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTT----SSEEEEECSSSSC
T ss_pred cCEEEEECCCHHHHHHHHHHHhh----CCEEEEEEeCCCC
Confidence 46899999999999999999996 8999999988743
No 264
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.10 E-value=0.00037 Score=73.81 Aligned_cols=39 Identities=26% Similarity=0.522 Sum_probs=34.6
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
...+|++|||+|++|+++|..|++. .|++|+|||++...
T Consensus 22 ~~~~d~iivG~G~~g~~~a~~l~~~---~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 22 GKTYDYIIAGGGLTGLTVAAKLTEN---PKIKVLVIEKGFYE 60 (587)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHTS---TTCCEEEEESSCCC
T ss_pred cccCCEEEECcCHHHHHHHHHHHhC---CCCcEEEEecCCcc
Confidence 4579999999999999999999993 38999999998754
No 265
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.10 E-value=0.0026 Score=65.29 Aligned_cols=97 Identities=21% Similarity=0.317 Sum_probs=71.7
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceEEeChhhHHHHHHcCCcHHHHhhh
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHR 134 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lgl~~~~~~~~ 134 (514)
..+|+|||||+.|+-+|..|++. |.+|+|+|+.+.+. .. . +
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~----g~~Vtlv~~~~~~l----------~~-----~------------~-------- 212 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLM----GVQTHIIEMLDRAL----------IT-----L------------E-------- 212 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSSSSC----------TT-----S------------C--------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc----CCEEEEEEeCCcCC----------CC-----C------------C--------
Confidence 46899999999999999999996 99999999987541 00 0 0
Q ss_pred ccCcceEEEEeCCCcceeeeccCCCCCcccEEEEehHHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCc
Q 010225 135 HAYFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 214 (514)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~ 214 (514)
-..+.+.+.+.++ ++++.+++|++++.
T Consensus 213 -----------------------------------d~~~~~~l~~~l~----v~i~~~~~v~~i~~-------------- 239 (466)
T 3l8k_A 213 -----------------------------------DQDIVNTLLSILK----LNIKFNSPVTEVKK-------------- 239 (466)
T ss_dssp -----------------------------------CHHHHHHHHHHHC----CCEECSCCEEEEEE--------------
T ss_pred -----------------------------------CHHHHHHHHhcCE----EEEEECCEEEEEEE--------------
Confidence 0123344444442 88999999999976
Q ss_pred cccccccC-CeeEEEeC--CCc--EEEeeE-EEecCCCchh
Q 010225 215 ATTLFTKG-HLAKLDLS--DGT--SLYAKL-VGADGGKSRV 249 (514)
Q Consensus 215 ~~~~~~~~-~~~~v~~~--~g~--~~~ad~-V~AdG~~S~v 249 (514)
.+ +.+.+.+. +|+ ++.+|. |.|.|.....
T Consensus 240 ------~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G~~p~~ 274 (466)
T 3l8k_A 240 ------IKDDEYEVIYSTKDGSKKSIFTNSVVLAAGRRPVI 274 (466)
T ss_dssp ------EETTEEEEEECCTTSCCEEEEESCEEECCCEEECC
T ss_pred ------cCCCcEEEEEEecCCceEEEEcCEEEECcCCCccc
Confidence 33 56677777 666 799999 9999976554
No 266
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.09 E-value=0.0019 Score=62.25 Aligned_cols=36 Identities=31% Similarity=0.341 Sum_probs=32.4
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
..+|+|||+|+.|+-+|..|++. |.+|+++++.+.+
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~----g~~v~~~~~~~~~ 189 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSY----STKVYLIHRRDTF 189 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH----SSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHh----CCeEEEEEeCCCC
Confidence 46899999999999999999996 8999999988754
No 267
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.03 E-value=0.00032 Score=72.88 Aligned_cols=37 Identities=14% Similarity=0.170 Sum_probs=33.7
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
..+||+|||+|++|+++|+.|++. |++|+|||++...
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~----~~~v~~~e~~~~~ 40 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEA----GVQTLMLEMGQLW 40 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT----TCCEEEEESSCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC----CCcEEEEeCCCCC
Confidence 468999999999999999999996 9999999998743
No 268
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=97.02 E-value=0.0005 Score=72.16 Aligned_cols=38 Identities=37% Similarity=0.628 Sum_probs=34.2
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
..+|++|||+|++|+++|..|++. .|.+|+|||++...
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~---~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSED---PAVSVALVEAGPDD 49 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTS---TTSCEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC---CCCCEEEEecCCcC
Confidence 579999999999999999999995 38999999998755
No 269
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.01 E-value=0.00042 Score=72.03 Aligned_cols=37 Identities=22% Similarity=0.364 Sum_probs=33.7
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCC
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~ 93 (514)
...+|++|||+|++|+++|+.|++. |.+|+|+|++..
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~----~~~v~~~e~~~~ 45 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQA----GIPTQIVEMGRS 45 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHT----TCCEEEECSSCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHC----CCcEEEEECCCC
Confidence 4569999999999999999999995 999999999864
No 270
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.00 E-value=0.004 Score=65.13 Aligned_cols=36 Identities=25% Similarity=0.343 Sum_probs=32.9
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~ 93 (514)
...+|+|||+|.+|+-+|..|++. |.+|+|+++.+.
T Consensus 177 ~~krV~VIG~G~sgve~a~~l~~~----~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 177 AGRRVGVIGTGSTGQQVITSLAPE----VEHLTVFVRTPQ 212 (540)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTT----CSEEEEEESSCC
T ss_pred ccceEEEECCCchHHHHHHHHHhh----CCEEEEEECCCC
Confidence 346899999999999999999996 899999999886
No 271
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.00 E-value=0.0011 Score=68.67 Aligned_cols=54 Identities=28% Similarity=0.242 Sum_probs=39.4
Q ss_pred HHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCccccccccCCeeEEEeCCCc----EEEeeE-EEecCCC
Q 010225 172 VLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGT----SLYAKL-VGADGGK 246 (514)
Q Consensus 172 ~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~----~~~ad~-V~AdG~~ 246 (514)
.+.+.+.+.+++.| |+|+++++|++++. ++....+...||+ ++.||+ |-|.|..
T Consensus 273 ~~~~~~~~~L~~~G-V~v~~~~~v~~v~~--------------------~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~ 331 (502)
T 4g6h_A 273 KLSSYAQSHLENTS-IKVHLRTAVAKVEE--------------------KQLLAKTKHEDGKITEETIPYGTLIWATGNK 331 (502)
T ss_dssp HHHHHHHHHHHHTT-CEEETTEEEEEECS--------------------SEEEEEEECTTSCEEEEEEECSEEEECCCEE
T ss_pred HHHHHHHHHHHhcc-eeeecCceEEEEeC--------------------CceEEEEEecCcccceeeeccCEEEEccCCc
Confidence 35566777777777 99999999999964 2223344556664 599999 9999953
No 272
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=96.97 E-value=0.0026 Score=62.05 Aligned_cols=35 Identities=31% Similarity=0.455 Sum_probs=31.6
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~ 93 (514)
..+|+|||+|+.|+-+|..|++. |.+|+++++.+.
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~----g~~V~l~~~~~~ 189 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRF----ARSVTLVHRRDE 189 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTT----CSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHh----CCeEEEEEcCCc
Confidence 46899999999999999999996 899999998763
No 273
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=96.95 E-value=0.0038 Score=65.37 Aligned_cols=36 Identities=19% Similarity=0.314 Sum_probs=32.7
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~ 93 (514)
...+|+|||+|.+|+-+|..|++. +.+|+|+++.+.
T Consensus 184 ~~krV~VIG~G~tgve~a~~la~~----~~~Vtv~~r~~~ 219 (545)
T 3uox_A 184 TGKRVGVIGTGATGVQIIPIAAET----AKELYVFQRTPN 219 (545)
T ss_dssp BTCEEEEECCSHHHHHHHHHHTTT----BSEEEEEESSCC
T ss_pred CCCeEEEECCCccHHHHHHHHHhh----CCEEEEEEcCCC
Confidence 346899999999999999999996 899999999985
No 274
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=96.95 E-value=0.0019 Score=62.56 Aligned_cols=36 Identities=28% Similarity=0.391 Sum_probs=32.0
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
..+|+|||+|..|+-+|..|++. |.+|+++++.+.+
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~----~~~v~~~~~~~~~ 189 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPI----AKEVSIIHRRDKF 189 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTT----BSEEEEECSSSSC
T ss_pred CCEEEEECCCHhHHHHHHHHHhh----CCeEEEEEecCcC
Confidence 45899999999999999999996 8999999987743
No 275
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=96.94 E-value=0.0022 Score=61.13 Aligned_cols=33 Identities=12% Similarity=0.139 Sum_probs=29.8
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
..+|+|||+|+.|+-+|..|++. | +|+++++.+
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~~----g-~v~~v~~~~ 173 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPDW----G-ETTFFTNGI 173 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGGT----S-EEEEECTTT
T ss_pred CCEEEEEecCccHHHHHHHhhhc----C-cEEEEECCC
Confidence 46899999999999999999996 8 999998765
No 276
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=96.87 E-value=0.0037 Score=65.10 Aligned_cols=33 Identities=27% Similarity=0.323 Sum_probs=30.0
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSN 91 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~ 91 (514)
..+|+|||||..|+-+|..|++. |.+|+|+++.
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~----G~~Vtlv~~~ 242 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGI----GLDVTVMVRS 242 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT----TCCEEEEESS
T ss_pred CCeEEEECCcHHHHHHHHHHHHc----CCeEEEEecc
Confidence 34699999999999999999997 8999999985
No 277
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=96.59 E-value=0.0018 Score=68.49 Aligned_cols=40 Identities=25% Similarity=0.363 Sum_probs=36.9
Q ss_pred CCCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCCC
Q 010225 52 NDDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPALG 95 (514)
Q Consensus 52 ~~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~~ 95 (514)
++++|||+|||+|+.|..+|..|++. |.+|++|||++..+
T Consensus 5 ~~~~~D~~i~GtGl~~~~~a~~~~~~----g~~vl~id~~~~~g 44 (650)
T 1vg0_A 5 LPSDFDVIVIGTGLPESIIAAACSRS----GQRVLHVDSRSYYG 44 (650)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSSSC
T ss_pred CCCcCCEEEECCcHHHHHHHHHHHhC----CCEEEEEcCCCccc
Confidence 45689999999999999999999996 99999999999876
No 278
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=96.48 E-value=0.012 Score=62.26 Aligned_cols=32 Identities=25% Similarity=0.266 Sum_probs=29.9
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSN 91 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~ 91 (514)
.+|+|||||..|+-+|..|++. |.+|+|+++.
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~----g~~Vtlv~~~ 318 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASL----GGDVTVMVRS 318 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT----TCCEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHc----CCEEEEEECC
Confidence 4799999999999999999997 8999999987
No 279
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=96.46 E-value=0.011 Score=61.53 Aligned_cols=35 Identities=34% Similarity=0.528 Sum_probs=31.5
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~ 93 (514)
..+|+|||||.+|+-+|..|++. |.+|+++++.+.
T Consensus 355 ~k~V~ViGgG~~g~E~A~~L~~~----g~~Vtlv~~~~~ 389 (521)
T 1hyu_A 355 GKRVAVIGGGNSGVEAAIDLAGI----VEHVTLLEFAPE 389 (521)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHH----BSEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhh----CCEEEEEEeCcc
Confidence 35899999999999999999996 899999998764
No 280
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.24 E-value=0.013 Score=60.02 Aligned_cols=36 Identities=22% Similarity=0.296 Sum_probs=30.9
Q ss_pred CccEEEECCCHHHHHHHHHhc--------------------cCCCCCCc-EEEEEcCCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLA--------------------SMPLTKHL-SVAIIDSNPAL 94 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~--------------------~~~~~~g~-~V~viE~~~~~ 94 (514)
..+|+|||||.+|+-+|..|+ +. |. +|+|++++...
T Consensus 145 ~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~----g~~~V~lv~r~~~~ 201 (460)
T 1cjc_A 145 CDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQS----RVKTVWIVGRRGPL 201 (460)
T ss_dssp SSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTC----CCCEEEEECSSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhC----CCcEEEEEEcCChH
Confidence 468999999999999999998 44 76 79999998754
No 281
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=96.05 E-value=0.025 Score=59.14 Aligned_cols=36 Identities=17% Similarity=0.224 Sum_probs=32.7
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~ 93 (514)
...+|+|||+|.+|+-+|..|++. +.+|+||++.+.
T Consensus 190 ~~krV~VIG~G~sgve~a~~l~~~----~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 190 TGKRVGVIGTGSSGIQSIPIIAEQ----AEQLFVFQRSAN 225 (549)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHH----BSEEEEEESSCC
T ss_pred CCCEEEEECCCchHHHHHHHHHhh----CCEEEEEECCCC
Confidence 346899999999999999999996 899999999885
No 282
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=95.88 E-value=0.019 Score=58.83 Aligned_cols=35 Identities=14% Similarity=0.049 Sum_probs=31.8
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~ 93 (514)
..+|+|||||.+|+=+|..|++. |.+|+|+++.+.
T Consensus 197 ~k~VvVVG~G~sg~eiA~~l~~~----g~~V~li~~~~~ 231 (464)
T 2xve_A 197 DKTVLLVGSSYSAEDIGSQCYKY----GAKKLISCYRTA 231 (464)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHT----TCSEEEEECSSC
T ss_pred CCEEEEEcCCCCHHHHHHHHHHh----CCeEEEEEECCC
Confidence 46899999999999999999997 899999998764
No 283
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=95.85 E-value=0.013 Score=59.59 Aligned_cols=34 Identities=21% Similarity=0.102 Sum_probs=30.9
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcE-EEEEcCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLS-VAIIDSNP 92 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~-V~viE~~~ 92 (514)
..+|+|||||.+|+=+|..|++. |.+ |+|+++.+
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~----~~~~V~l~~r~~ 246 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPV----AKHPIYQSLLGG 246 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTT----SCSSEEEECTTC
T ss_pred CCEEEEEccCcCHHHHHHHHHHH----hCCcEEEEeCCC
Confidence 46899999999999999999997 788 99999876
No 284
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=95.80 E-value=0.017 Score=59.03 Aligned_cols=40 Identities=28% Similarity=0.398 Sum_probs=30.6
Q ss_pred CccEEEECCCHHHHHHHHHhccCC---------------C-CCC-cEEEEEcCCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMP---------------L-TKH-LSVAIIDSNPAL 94 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~---------------~-~~g-~~V~viE~~~~~ 94 (514)
..+|+|||+|.+|+-+|..|++.+ + ..| .+|+|++++...
T Consensus 147 ~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~ 203 (456)
T 1lqt_A 147 GARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPL 203 (456)
T ss_dssp SSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChh
Confidence 468999999999999999998720 0 014 489999998744
No 285
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.79 E-value=0.01 Score=49.76 Aligned_cols=36 Identities=22% Similarity=0.310 Sum_probs=32.4
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~ 93 (514)
.+-.|+|||+|..|..+|..|.+. |++|+++|+++.
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~----g~~v~vid~~~~ 41 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLAS----DIPLVVIETSRT 41 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHT----TCCEEEEESCHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC----CCCEEEEECCHH
Confidence 455799999999999999999996 999999999873
No 286
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=95.75 E-value=0.026 Score=60.67 Aligned_cols=48 Identities=13% Similarity=-0.025 Sum_probs=35.9
Q ss_pred HHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCccccccccCCeeEEEeCCC--cEEEeeE-EEecCCC
Q 010225 175 SSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDG--TSLYAKL-VGADGGK 246 (514)
Q Consensus 175 ~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g--~~~~ad~-V~AdG~~ 246 (514)
..+.+.+++.| |+++.+++|++++. +.+.+. .+| +++.+|. |.|.|..
T Consensus 577 ~~~~~~l~~~G-V~v~~~~~v~~i~~----------------------~~v~~~-~~G~~~~i~~D~Vi~a~G~~ 627 (671)
T 1ps9_A 577 WIHRTTLLSRG-VKMIPGVSYQKIDD----------------------DGLHVV-INGETQVLAVDNVVICAGQE 627 (671)
T ss_dssp HHHHHHHHHTT-CEEECSCEEEEEET----------------------TEEEEE-ETTEEEEECCSEEEECCCEE
T ss_pred HHHHHHHHhcC-CEEEeCcEEEEEeC----------------------CeEEEe-cCCeEEEEeCCEEEECCCcc
Confidence 44556666666 99999999999863 345554 567 5799999 9999964
No 287
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=95.61 E-value=0.03 Score=60.76 Aligned_cols=35 Identities=23% Similarity=0.221 Sum_probs=31.9
Q ss_pred CccEEEEC--CCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 55 QYDVAVVG--GGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 55 ~~dVvIVG--gG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
..+|+||| ||..|+-+|..|++. |.+|+|+++.+ +
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~~----G~~Vtlv~~~~-l 564 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLATA----GHEVTIVSGVH-L 564 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHT----TCEEEEEESSC-T
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHc----CCEEEEEeccc-c
Confidence 45899999 999999999999996 89999999987 5
No 288
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.54 E-value=0.012 Score=50.24 Aligned_cols=37 Identities=24% Similarity=0.297 Sum_probs=32.4
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
....|+|||+|..|..+|..|.+. |++|+++|+++..
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~----g~~V~vid~~~~~ 54 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSS----GHSVVVVDKNEYA 54 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT----TCEEEEEESCGGG
T ss_pred CCCcEEEECCCHHHHHHHHHHHhC----CCeEEEEECCHHH
Confidence 346899999999999999999996 8999999987643
No 289
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=95.29 E-value=0.024 Score=63.58 Aligned_cols=35 Identities=26% Similarity=0.254 Sum_probs=31.6
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
.+|+|||+|+.|+-+|..|++. |.+|+|+|+.+.+
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~----G~~Vtvv~~~~~~ 319 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAAT----GGVVAVIDARSSI 319 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGG----TCCSEEEESCSSC
T ss_pred CeEEEEcCCHHHHHHHHHHHHc----CCcEEEEECCCcc
Confidence 5799999999999999999997 8899999998743
No 290
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.25 E-value=0.016 Score=48.08 Aligned_cols=33 Identities=30% Similarity=0.418 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
.+|+|||+|..|..+|..|.+. |++|+++|+++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~----g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEK----GHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT----TCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC----CCeEEEEECCH
Confidence 4799999999999999999996 89999999865
No 291
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.12 E-value=0.022 Score=45.66 Aligned_cols=34 Identities=29% Similarity=0.574 Sum_probs=30.6
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCC-cEEEEEcCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKH-LSVAIIDSNP 92 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g-~~V~viE~~~ 92 (514)
...|+|+|+|..|..++..|.+. | ++|+++++++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~----g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTS----SNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHC----SSEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhC----CCceEEEEeCCH
Confidence 35799999999999999999996 8 9999999875
No 292
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=95.11 E-value=0.02 Score=54.93 Aligned_cols=35 Identities=23% Similarity=0.310 Sum_probs=32.1
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
.+|+|||||..|+=+|..|++. |.+|+|+|+.+.+
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~----g~~Vtlv~~~~~~ 180 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKF----ADKVTIVHRRDEL 180 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT----CSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhc----CCEEEEEeccccc
Confidence 4899999999999999999997 9999999998754
No 293
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.10 E-value=0.018 Score=48.14 Aligned_cols=33 Identities=24% Similarity=0.432 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
..|+|+|+|..|..+|..|.+. |++|+++|+++
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~----g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAA----GKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT----TCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHC----CCeEEEEECCH
Confidence 4799999999999999999996 99999999876
No 294
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.03 E-value=0.022 Score=48.42 Aligned_cols=34 Identities=18% Similarity=0.278 Sum_probs=30.8
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
+..|+|+|+|..|..+|..|.+. |++|+++|+++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~----g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQR----GQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHT----TCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHC----CCCEEEEECCC
Confidence 35799999999999999999996 99999999974
No 295
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=95.00 E-value=0.022 Score=54.64 Aligned_cols=34 Identities=29% Similarity=0.541 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~ 93 (514)
.+|.|||+|..|..+|..|++. |++|+++|+++.
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~----G~~V~~~d~~~~ 49 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAAT----GHTVVLVDQTED 49 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT----TCEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC----CCeEEEEECCHH
Confidence 4699999999999999999996 999999998763
No 296
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=94.98 E-value=0.014 Score=58.19 Aligned_cols=35 Identities=20% Similarity=0.237 Sum_probs=32.5
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
.+|+|||||..|+-+|..|++. |.+|+|+|+.+.+
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~----g~~Vtvv~~~~~~ 181 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDS----GTPASIGIILEYP 181 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHH----TCCEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhC----CCeEEEEEcCCcc
Confidence 5799999999999999999996 9999999999865
No 297
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=94.68 E-value=0.028 Score=54.68 Aligned_cols=39 Identities=26% Similarity=0.345 Sum_probs=33.4
Q ss_pred CCCCCccEEEECCCHHHHHHHHHhccCCCCCCc-EEEEEcCCCC
Q 010225 51 NNDDQYDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNPA 93 (514)
Q Consensus 51 ~~~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~-~V~viE~~~~ 93 (514)
+.++..+|+|||||-.|.++|..|++. |+ +|+++|.+..
T Consensus 5 ~~~~~~kI~VIGaG~vG~~lA~~la~~----g~~~V~L~D~~~~ 44 (331)
T 1pzg_A 5 LVQRRKKVAMIGSGMIGGTMGYLCALR----ELADVVLYDVVKG 44 (331)
T ss_dssp CCSCCCEEEEECCSHHHHHHHHHHHHH----TCCEEEEECSSSS
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHhC----CCCeEEEEECChh
Confidence 344457899999999999999999986 77 9999998863
No 298
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=94.54 E-value=0.021 Score=54.98 Aligned_cols=35 Identities=37% Similarity=0.506 Sum_probs=31.2
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~ 93 (514)
..+|+|||+|..|...|..++.+ |++|+|+|..+.
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~----G~~V~l~D~~~~ 40 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASG----GFRVKLYDIEPR 40 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT----TCCEEEECSCHH
T ss_pred CCeEEEECCcHHHHHHHHHHHhC----CCeEEEEECCHH
Confidence 45799999999999999999997 999999998763
No 299
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=94.51 E-value=0.033 Score=54.77 Aligned_cols=38 Identities=26% Similarity=0.266 Sum_probs=32.4
Q ss_pred CCCCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 51 NNDDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 51 ~~~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
+.+...+|+|||+|-.|.++|..|++. |++|+++++++
T Consensus 25 m~~~~mkI~VIGaG~mG~alA~~La~~----G~~V~l~~r~~ 62 (356)
T 3k96_A 25 MEPFKHPIAILGAGSWGTALALVLARK----GQKVRLWSYES 62 (356)
T ss_dssp --CCCSCEEEECCSHHHHHHHHHHHTT----TCCEEEECSCH
T ss_pred ccccCCeEEEECccHHHHHHHHHHHHC----CCeEEEEeCCH
Confidence 334456899999999999999999996 99999999875
No 300
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=94.48 E-value=0.058 Score=52.41 Aligned_cols=33 Identities=21% Similarity=0.448 Sum_probs=29.6
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
..+|+|||+|.+|+-+|..|++. | +|+++++..
T Consensus 163 ~~~v~VvG~G~~g~e~a~~l~~~----~-~v~~v~~~~ 195 (357)
T 4a9w_A 163 GMRVAIIGGGNSGAQILAEVSTV----A-ETTWITQHE 195 (357)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTT----S-EEEEECSSC
T ss_pred CCEEEEECCCcCHHHHHHHHHhh----C-CEEEEECCC
Confidence 46899999999999999999996 7 699999874
No 301
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=94.37 E-value=0.17 Score=50.44 Aligned_cols=48 Identities=10% Similarity=0.070 Sum_probs=36.8
Q ss_pred HHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCccccccccCCeeEEEeCCCcEEEeeE-EEecCCC
Q 010225 174 HSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGK 246 (514)
Q Consensus 174 ~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~ 246 (514)
...+.+.+++.| |+++++++|++++. +. |.+++|+++.+|+ |.|.|..
T Consensus 221 ~~~~~~~l~~~g-V~~~~~~~v~~i~~----------------------~~--v~~~~g~~~~~D~vi~a~G~~ 269 (409)
T 3h8l_A 221 RKAVASIYNQLG-IKLVHNFKIKEIRE----------------------HE--IVDEKGNTIPADITILLPPYT 269 (409)
T ss_dssp HHHHHHHHHHHT-CEEECSCCEEEECS----------------------SE--EEETTSCEEECSEEEEECCEE
T ss_pred HHHHHHHHHHCC-CEEEcCCceEEECC----------------------Ce--EEECCCCEEeeeEEEECCCCC
Confidence 344555555556 99999999999954 22 6778999999999 9999953
No 302
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=94.30 E-value=0.046 Score=52.31 Aligned_cols=36 Identities=31% Similarity=0.352 Sum_probs=32.2
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
..+|+|||||..|+-+|..|++. |.+|+|+|+....
T Consensus 152 ~~~vvViGgG~ig~e~A~~l~~~----G~~Vt~v~~~~~~ 187 (314)
T 4a5l_A 152 NKVLMVVGGGDAAMEEALHLTKY----GSKVIILHRRDAF 187 (314)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTT----SSEEEEECSSSSC
T ss_pred CCeEEEECCChHHHHHHHHHHHh----CCeeeeecccccc
Confidence 35799999999999999999997 9999999987643
No 303
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=93.90 E-value=0.046 Score=52.88 Aligned_cols=33 Identities=21% Similarity=0.413 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
.+|+|||+|..|.++|..|++. |++|++++|++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~----g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT----GHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT----TCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhC----CCeEEEEeCCh
Confidence 5799999999999999999996 89999999864
No 304
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=93.81 E-value=0.043 Score=45.62 Aligned_cols=33 Identities=30% Similarity=0.349 Sum_probs=30.0
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
..|+|+|+|..|..+|..|.+. |++|+++|++.
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~----g~~v~~~d~~~ 39 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRM----GHEVLAVDINE 39 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT----TCCCEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHHC----CCEEEEEeCCH
Confidence 3699999999999999999996 89999999865
No 305
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=93.68 E-value=0.063 Score=50.90 Aligned_cols=34 Identities=29% Similarity=0.416 Sum_probs=31.1
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~ 93 (514)
.+|+|||+|..|...|..|++. |++|+++|+++.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~----G~~V~l~d~~~~ 38 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFH----GFAVTAYDINTD 38 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC----CCeEEEEeCCHH
Confidence 4799999999999999999996 999999998763
No 306
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=93.52 E-value=0.06 Score=54.89 Aligned_cols=35 Identities=26% Similarity=0.463 Sum_probs=31.9
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~ 93 (514)
.++|+|+|+|-.|..+|..|... |++|+|+|+++.
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~----~~~v~vId~d~~ 37 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGE----NNDITIVDKDGD 37 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCST----TEEEEEEESCHH
T ss_pred cCEEEEECCCHHHHHHHHHHHHC----CCCEEEEECCHH
Confidence 45799999999999999999986 999999999864
No 307
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=93.47 E-value=0.031 Score=58.36 Aligned_cols=36 Identities=19% Similarity=0.391 Sum_probs=32.0
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
..+|+|||+|.+|+-+|..|++. |.+|+++++.+..
T Consensus 186 gk~V~VIG~G~sg~e~a~~l~~~----~~~vtv~~r~~~~ 221 (542)
T 1w4x_A 186 GQRVGVIGTGSSGIQVSPQIAKQ----AAELFVFQRTPHF 221 (542)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH----BSEEEEEESSCCC
T ss_pred CCEEEEECCCccHHHHHHHHhhc----CceEEEEEcCCcc
Confidence 46899999999999999999996 8899999987643
No 308
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=93.43 E-value=0.21 Score=56.29 Aligned_cols=33 Identities=21% Similarity=0.141 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCc-EEEEEcCCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNP 92 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~-~V~viE~~~ 92 (514)
-+|+|||||..|+=+|..|.+. |. +|+|+++.+
T Consensus 333 ~~VvVIGgG~~g~e~A~~~~~~----G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 333 GAVIVLGAGDTAFDCATSALRC----GARRVFLVFRKG 366 (1025)
T ss_dssp SEEEEECSSHHHHHHHHHHHHT----TCSEEEEECSSC
T ss_pred CcEEEECCChHHHHHHHHHHHc----CCCEEEEEEecC
Confidence 3899999999999999999997 75 899999876
No 309
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=93.39 E-value=0.057 Score=52.12 Aligned_cols=35 Identities=37% Similarity=0.506 Sum_probs=31.2
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~ 93 (514)
..+|.|||+|..|.+.|..|++. |++|+++|+++.
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~----G~~V~l~d~~~~ 40 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASG----GFRVKLYDIEPR 40 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT----TCCEEEECSCHH
T ss_pred CceEEEEeeCHHHHHHHHHHHHC----CCEEEEEeCCHH
Confidence 35799999999999999999996 999999998863
No 310
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=93.38 E-value=0.052 Score=49.20 Aligned_cols=33 Identities=30% Similarity=0.443 Sum_probs=30.4
Q ss_pred cEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCC
Q 010225 57 DVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (514)
Q Consensus 57 dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~ 93 (514)
+|+|||+|..|..+|..|.+. |++|+++|+++.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~----g~~v~vid~~~~ 34 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSR----KYGVVIINKDRE 34 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHT----TCCEEEEESCHH
T ss_pred EEEEECCCHHHHHHHHHHHhC----CCeEEEEECCHH
Confidence 699999999999999999996 999999998763
No 311
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=93.34 E-value=0.062 Score=51.31 Aligned_cols=37 Identities=19% Similarity=0.294 Sum_probs=32.5
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
+..+|.|||.|-.|..+|..|++. |++|+++++++..
T Consensus 14 ~~~~I~vIG~G~mG~~~A~~l~~~----G~~V~~~dr~~~~ 50 (296)
T 3qha_A 14 EQLKLGYIGLGNMGAPMATRMTEW----PGGVTVYDIRIEA 50 (296)
T ss_dssp -CCCEEEECCSTTHHHHHHHHTTS----TTCEEEECSSTTT
T ss_pred CCCeEEEECcCHHHHHHHHHHHHC----CCeEEEEeCCHHH
Confidence 356899999999999999999996 9999999988743
No 312
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=93.13 E-value=0.07 Score=46.76 Aligned_cols=34 Identities=18% Similarity=0.179 Sum_probs=30.6
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCC-CcEEEEEcCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTK-HLSVAIIDSNP 92 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~-g~~V~viE~~~ 92 (514)
...|+|||+|..|..+|..|.+ . |++|+++|+++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~----~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRA----RYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHH----HHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHh----ccCCeEEEEECCH
Confidence 4579999999999999999988 5 78999999876
No 313
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=93.08 E-value=0.055 Score=52.09 Aligned_cols=33 Identities=21% Similarity=0.334 Sum_probs=29.7
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
.+|+|||+|-.|.++|..|++. |++|++++|+.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~----g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRS----GEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHT----SCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHC----CCeEEEEEcCc
Confidence 4799999999999999999996 89999999864
No 314
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=92.87 E-value=0.085 Score=50.88 Aligned_cols=35 Identities=26% Similarity=0.464 Sum_probs=31.2
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCc-EEEEEcCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNPA 93 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~-~V~viE~~~~ 93 (514)
..+|+|||+|-.|.++|..|++. |+ +|+++|++..
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~----g~~~V~l~D~~~~ 39 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKD----NLADVVLFDIAEG 39 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH----TCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC----CCceEEEEeCCch
Confidence 45799999999999999999996 87 9999998763
No 315
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=92.83 E-value=0.098 Score=51.85 Aligned_cols=36 Identities=22% Similarity=0.391 Sum_probs=32.4
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~ 93 (514)
...+|+|||+|++|+.+|..|... |.+|+++|+...
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~l----Ga~V~v~D~~~~ 224 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRL----GAVVSATDVRPA 224 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSTT
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC----CCEEEEEcCCHH
Confidence 346899999999999999999997 899999998873
No 316
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=92.78 E-value=0.1 Score=50.58 Aligned_cols=35 Identities=23% Similarity=0.444 Sum_probs=31.3
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCc-EEEEEcCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNPA 93 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~-~V~viE~~~~ 93 (514)
..+|+|||||-.|.++|..|++. |+ +|+++|.+..
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~----g~~~V~L~Di~~~ 49 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQK----DLGDVYMFDIIEG 49 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT----TCCEEEEECSSTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhC----CCCeEEEEECCHH
Confidence 35899999999999999999996 77 9999998764
No 317
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=92.71 E-value=0.11 Score=47.26 Aligned_cols=35 Identities=17% Similarity=0.283 Sum_probs=31.3
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
....|+|||||.+|...|..|.+. |.+|+|+++..
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~----GA~VtVvap~~ 64 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQE----GAAITVVAPTV 64 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGG----CCCEEEECSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC----CCEEEEECCCC
Confidence 456899999999999999999997 99999998754
No 318
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=92.63 E-value=0.15 Score=51.42 Aligned_cols=48 Identities=8% Similarity=-0.013 Sum_probs=33.7
Q ss_pred HHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCccccccccCCeeEEEe--CC-----CcEEEeeE-EEecCC
Q 010225 175 SSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDL--SD-----GTSLYAKL-VGADGG 245 (514)
Q Consensus 175 ~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~-----g~~~~ad~-V~AdG~ 245 (514)
..+.+.+++.| |+++++++|++++. +.+.+.. .+ +.++.+|+ |.|.|.
T Consensus 212 ~~~~~~l~~~g-I~~~~~~~v~~v~~----------------------~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~ 267 (437)
T 3sx6_A 212 GILTKGLKEEG-IEAYTNCKVTKVED----------------------NKMYVTQVDEKGETIKEMVLPVKFGMMIPAF 267 (437)
T ss_dssp HHHHHHHHHTT-CEEECSEEEEEEET----------------------TEEEEEEECTTSCEEEEEEEECSEEEEECCE
T ss_pred HHHHHHHHHCC-CEEEcCCEEEEEEC----------------------CeEEEEecccCCccccceEEEEeEEEEcCCC
Confidence 44556666666 99999999999964 3343332 23 45799999 999884
No 319
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=92.63 E-value=0.11 Score=46.69 Aligned_cols=35 Identities=17% Similarity=0.306 Sum_probs=31.0
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~ 93 (514)
..+|.|||+|-.|.++|..|++. |++|+++++++.
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~----g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIA----GHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT----TCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHC----CCEEEEEcCCHH
Confidence 45799999999999999999996 899999998763
No 320
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=92.63 E-value=0.1 Score=49.32 Aligned_cols=33 Identities=21% Similarity=0.236 Sum_probs=30.4
Q ss_pred cEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCC
Q 010225 57 DVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (514)
Q Consensus 57 dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~ 93 (514)
+|.|||+|..|.++|..|++. |++|+++++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~----g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQ----GHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHT----TCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhC----CCCEEEEEcCcc
Confidence 699999999999999999996 899999998764
No 321
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=92.45 E-value=0.1 Score=50.21 Aligned_cols=33 Identities=30% Similarity=0.454 Sum_probs=30.2
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCc--EEEEEcCCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHL--SVAIIDSNP 92 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~--~V~viE~~~ 92 (514)
.+|+|||+|-.|.++|..|++. |+ +|+++|++.
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~----g~~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQR----GIAREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT----TCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhC----CCCCEEEEEeCCh
Confidence 5799999999999999999996 88 999999875
No 322
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=92.43 E-value=0.12 Score=49.71 Aligned_cols=35 Identities=31% Similarity=0.503 Sum_probs=31.2
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCc-EEEEEcCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNP 92 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~-~V~viE~~~ 92 (514)
...+|+|||+|..|.++|+.|++. |+ .|+++|..+
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~----g~~~v~l~D~~~ 42 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQK----ELADVVLVDIPQ 42 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT----TCCEEEEECCGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC----CCCeEEEEeccc
Confidence 446899999999999999999996 88 999999873
No 323
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=92.34 E-value=0.071 Score=50.04 Aligned_cols=35 Identities=17% Similarity=0.407 Sum_probs=31.4
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
....|+|||||.+|+..|..|.+. |.+|+|++...
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~----Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPT----GCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGG----TCEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhC----CCEEEEEcCCC
Confidence 346799999999999999999997 99999999754
No 324
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=92.28 E-value=0.11 Score=50.80 Aligned_cols=33 Identities=36% Similarity=0.259 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
.+|+|||+|-.|..+|..|++. |++|+++++++
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~----g~~V~~~~r~~ 37 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK----GQSVLAWDIDA 37 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT----TCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHhC----CCEEEEEeCCH
Confidence 5899999999999999999996 89999999865
No 325
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=92.26 E-value=0.19 Score=50.67 Aligned_cols=50 Identities=6% Similarity=-0.072 Sum_probs=35.8
Q ss_pred HHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCccccccccCCeeEEEeC--CCcEEEeeE-EEecCCC
Q 010225 174 HSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLS--DGTSLYAKL-VGADGGK 246 (514)
Q Consensus 174 ~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~g~~~~ad~-V~AdG~~ 246 (514)
...+.+.+++.| |+++++++|++++. +.+.+... ++.++.+|+ |.|.|..
T Consensus 203 ~~~l~~~l~~~G-V~i~~~~~v~~v~~----------------------~~v~~~~~~~~g~~i~~D~vv~a~G~~ 255 (430)
T 3h28_A 203 KRLVEDLFAERN-IDWIANVAVKAIEP----------------------DKVIYEDLNGNTHEVPAKFTMFMPSFQ 255 (430)
T ss_dssp HHHHHHHHHHTT-CEEECSCEEEEECS----------------------SEEEEECTTSCEEEEECSEEEEECEEE
T ss_pred HHHHHHHHHHCC-CEEEeCCEEEEEeC----------------------CeEEEEecCCCceEEeeeEEEECCCCc
Confidence 345666667777 99999999999954 33444321 266899999 9998854
No 326
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=92.21 E-value=0.13 Score=49.33 Aligned_cols=43 Identities=16% Similarity=0.100 Sum_probs=33.5
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHhhcCCCchHHHHHHHH
Q 010225 440 ASLLKKYEAERKPANIVMMAVLDGFQKAYSVDFGPLNILRAAA 482 (514)
Q Consensus 440 ~~~l~~Y~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 482 (514)
.+.++.+++-|......+....-..++-..-+.|....+...+
T Consensus 247 sSM~qD~~~gr~tEid~i~G~vv~~a~~~gv~tP~~~~l~~li 289 (307)
T 3ego_A 247 SSMLVDVIGGRQTEADAIIGYLLKEASLQGLDAVHLEFLYGSI 289 (307)
T ss_dssp CHHHHHHHHTCCCSHHHHHHHHHHHHHHTTCCCHHHHHHHHHH
T ss_pred chHHHHHHcCCcccHHHhhhHHHHHHHHcCCCCcHHHHHHHHH
Confidence 5788889999988888888888888888887777766655443
No 327
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=92.19 E-value=0.1 Score=50.66 Aligned_cols=32 Identities=25% Similarity=0.408 Sum_probs=29.6
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSN 91 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~ 91 (514)
.+|+|||+|-.|.++|..|++. |++|+++++.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~----g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALA----GEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHT----TCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHC----CCEEEEEECh
Confidence 4799999999999999999996 8999999974
No 328
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=92.16 E-value=0.13 Score=50.52 Aligned_cols=32 Identities=31% Similarity=0.398 Sum_probs=29.9
Q ss_pred cEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 57 DVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 57 dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
+|.|||+|-.|.++|..|++. |++|+++++.+
T Consensus 17 kI~iIG~G~mG~~la~~L~~~----G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKK----CREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTT----EEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhC----CCEEEEEECCH
Confidence 799999999999999999996 99999999865
No 329
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=92.14 E-value=0.12 Score=49.52 Aligned_cols=33 Identities=30% Similarity=0.465 Sum_probs=30.2
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
.+|+|||+|..|.++|..|++. |++|+++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~----g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQG----GNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT----TCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhC----CCcEEEEECCH
Confidence 4799999999999999999996 89999999765
No 330
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=92.11 E-value=0.12 Score=52.97 Aligned_cols=35 Identities=23% Similarity=0.486 Sum_probs=31.9
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
..++|+|||+|-.|+.+|..|++. |++|+++|+++
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~----G~~V~~~d~~~ 41 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADI----GHDVFCLDVDQ 41 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSCH
T ss_pred CCceEEEECcCHHHHHHHHHHHhC----CCEEEEEECCH
Confidence 357899999999999999999996 99999999875
No 331
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=92.10 E-value=0.12 Score=52.48 Aligned_cols=33 Identities=39% Similarity=0.578 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
.+|.|||+|-.|+.+|..|++. |++|+++|+++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~----G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL----GANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT----TCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhc----CCEEEEEECCH
Confidence 4799999999999999999996 99999999876
No 332
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=92.10 E-value=0.15 Score=49.28 Aligned_cols=35 Identities=26% Similarity=0.472 Sum_probs=30.8
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCc-EEEEEcCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNPA 93 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~-~V~viE~~~~ 93 (514)
..+|+|||+|-.|.++|..|+.. |+ +|+++|.+..
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~----g~~~v~L~Di~~~ 39 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQK----NLGDVVLFDIVKN 39 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT----TCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC----CCCeEEEEeCCHH
Confidence 35799999999999999999996 77 8999998763
No 333
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=91.94 E-value=0.073 Score=50.74 Aligned_cols=33 Identities=27% Similarity=0.459 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
.+|+|||+|-.|.++|..|++. |++|++++|..
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~----g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQS----LPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH----CTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHC----CCeEEEEEecc
Confidence 4799999999999999999996 89999999875
No 334
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=91.91 E-value=0.1 Score=43.77 Aligned_cols=34 Identities=21% Similarity=0.312 Sum_probs=30.4
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
...|+|||+|..|.++|..|.+. |++|+++++..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~----g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYP----QYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTT----TCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC----CCEEEEEcCCH
Confidence 45799999999999999999985 88899999875
No 335
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=91.81 E-value=1 Score=42.67 Aligned_cols=33 Identities=3% Similarity=0.045 Sum_probs=25.4
Q ss_pred ccEEEECCCH-HHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 56 YDVAVVGGGM-VGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 56 ~dVvIVGgG~-aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
.+++|||||. +++-+|..+.+. |.+|+|+++.+
T Consensus 147 ~~~~VIggG~~~~~e~a~~~~~~----~~~v~i~~~~~ 180 (304)
T 4fk1_A 147 QPLIIISENEDHTLHMTKLVYNW----STDLVIATNGN 180 (304)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTT----CSCEEEECSSC
T ss_pred CceeeecCCCchhhhHHHHHHhC----CceEEEEeccc
Confidence 4678888775 557888888885 88999998765
No 336
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=91.78 E-value=0.18 Score=51.03 Aligned_cols=33 Identities=27% Similarity=0.494 Sum_probs=31.1
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
.+|.|||+|..|...|..|++. |++|+++|+++
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~a----G~~V~l~D~~~ 87 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLA----GIETFLVVRNE 87 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT----TCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHC----CCeEEEEECcH
Confidence 5799999999999999999997 99999999887
No 337
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=91.68 E-value=0.11 Score=50.95 Aligned_cols=36 Identities=17% Similarity=0.266 Sum_probs=32.2
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~ 93 (514)
...+|+|||+|.+|+.+|..|... |.+|+++|+...
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~l----Ga~V~v~D~~~~ 218 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRL----GAKTTGYDVRPE 218 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHH----TCEEEEECSSGG
T ss_pred CCCEEEEECchHHHHHHHHHHHHC----CCEEEEEeCCHH
Confidence 346899999999999999999997 899999998873
No 338
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=91.64 E-value=0.16 Score=48.67 Aligned_cols=35 Identities=20% Similarity=0.379 Sum_probs=31.7
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~ 93 (514)
..+|.|||.|-.|..+|..|++. |++|+++++.+.
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~----G~~V~~~dr~~~ 55 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKN----GFKVTVWNRTLS 55 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSGG
T ss_pred CCEEEEECccHHHHHHHHHHHHC----CCeEEEEeCCHH
Confidence 35799999999999999999996 999999998764
No 339
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=91.62 E-value=0.15 Score=49.57 Aligned_cols=36 Identities=19% Similarity=0.169 Sum_probs=31.4
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
.++.+|.|||+|-.|.++|..|++. |++|+++++.+
T Consensus 12 ~~~~kI~iIG~G~mG~ala~~L~~~----G~~V~~~~r~~ 47 (335)
T 1z82_A 12 HMEMRFFVLGAGSWGTVFAQMLHEN----GEEVILWARRK 47 (335)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSH
T ss_pred ccCCcEEEECcCHHHHHHHHHHHhC----CCeEEEEeCCH
Confidence 3567899999999999999999996 99999999865
No 340
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=91.60 E-value=0.17 Score=48.01 Aligned_cols=34 Identities=26% Similarity=0.485 Sum_probs=30.8
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
....|.|||+|..|...|..|+ + |++|+++|+.+
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-a----G~~V~v~d~~~ 44 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-S----KHEVVLQDVSE 44 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-T----TSEEEEECSCH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-c----CCEEEEEECCH
Confidence 4578999999999999999999 8 99999999876
No 341
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=91.52 E-value=0.11 Score=49.77 Aligned_cols=32 Identities=34% Similarity=0.353 Sum_probs=28.9
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCC-----C-cEEEEEcC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTK-----H-LSVAIIDS 90 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~-----g-~~V~viE~ 90 (514)
+.+|.|||+|..|.++|..|++ . | ++|+++++
T Consensus 8 ~m~I~iiG~G~mG~~~a~~L~~----~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 8 PIKIAVFGLGGVGGYYGAMLAL----RAAATDGLLEVSWIAR 45 (317)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH----HHHHTTSSEEEEEECC
T ss_pred CCEEEEECcCHHHHHHHHHHHh----CccccCCCCCEEEEEc
Confidence 3589999999999999999998 4 7 89999987
No 342
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=91.33 E-value=0.21 Score=50.90 Aligned_cols=33 Identities=36% Similarity=0.597 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
.+|.|||+|..|..+|..|++. |++|+++|+++
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~----G~~V~l~D~~~ 70 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARV----GISVVAVESDP 70 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT----TCEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhC----CCeEEEEECCH
Confidence 4799999999999999999996 99999999876
No 343
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=91.17 E-value=0.17 Score=48.37 Aligned_cols=32 Identities=31% Similarity=0.486 Sum_probs=29.4
Q ss_pred cEEEECCCHHHHHHHHHhccCCCCCCc--EEEEEcCCC
Q 010225 57 DVAVVGGGMVGMALACSLASMPLTKHL--SVAIIDSNP 92 (514)
Q Consensus 57 dVvIVGgG~aGl~~A~~L~~~~~~~g~--~V~viE~~~ 92 (514)
+|+|||+|-.|.++|..|+.. |+ +|+++|.+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~----g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLR----GSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHT----TCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC----CCCCEEEEEeCCH
Confidence 699999999999999999996 78 899999875
No 344
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=91.14 E-value=0.19 Score=48.20 Aligned_cols=35 Identities=17% Similarity=0.393 Sum_probs=31.3
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~ 93 (514)
..+|.|||+|..|..+|..|++. |++|+++++++.
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~----g~~V~~~~~~~~ 64 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKM----GHTVTVWNRTAE 64 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHT----TCCEEEECSSGG
T ss_pred CCeEEEEcccHHHHHHHHHHHhC----CCEEEEEeCCHH
Confidence 46799999999999999999986 899999998763
No 345
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=91.14 E-value=0.19 Score=50.85 Aligned_cols=37 Identities=19% Similarity=0.407 Sum_probs=33.3
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
...+|.|||.|-.|+.+|..|++. |++|+++++++..
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~~----G~~V~~~D~~~~k 43 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSDF----GHEVVCVDKDARK 43 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSCSTT
T ss_pred CceEEEEEcCCHHHHHHHHHHHHC----CCEEEEEeCCHHH
Confidence 357899999999999999999996 9999999998753
No 346
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=91.06 E-value=0.18 Score=51.27 Aligned_cols=34 Identities=32% Similarity=0.326 Sum_probs=31.2
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
..+|.|||.|.+|+++|..|++. |++|++.|++.
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~----G~~V~~~D~~~ 42 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKL----GAIVTVNDGKP 42 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHT----TCEEEEEESSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC----CCEEEEEeCCc
Confidence 45899999999999999999996 99999999876
No 347
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=91.02 E-value=0.15 Score=51.69 Aligned_cols=35 Identities=14% Similarity=0.308 Sum_probs=31.4
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
..|+|||.|++|+++|..|++. |++|+++|.+...
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~----G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLAR----GVTPRVMDTRMTP 40 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTT----TCCCEEEESSSSC
T ss_pred CEEEEEeecHHHHHHHHHHHhC----CCEEEEEECCCCc
Confidence 4699999999999999999885 9999999987654
No 348
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=90.95 E-value=0.2 Score=47.91 Aligned_cols=34 Identities=38% Similarity=0.439 Sum_probs=31.1
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
..+|.|||.|-.|..+|..|++. |++|+++++++
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~----G~~V~~~dr~~ 40 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRA----GLSTWGADLNP 40 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHC----CCeEEEEECCH
Confidence 45799999999999999999996 99999999876
No 349
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=90.95 E-value=0.15 Score=53.15 Aligned_cols=36 Identities=22% Similarity=0.225 Sum_probs=32.1
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
+.+++|||||..|+=+|..+++. |.+|+|+++....
T Consensus 223 P~~lvIIGgG~IGlE~A~~~~~l----G~~VTii~~~~~L 258 (542)
T 4b1b_A 223 PGKTLVVGASYVALECSGFLNSL----GYDVTVAVRSIVL 258 (542)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHH----TCCEEEEESSCSS
T ss_pred CceEEEECCCHHHHHHHHHHHhc----CCeEEEecccccc
Confidence 46899999999999999999998 9999999986544
No 350
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=90.79 E-value=0.22 Score=47.83 Aligned_cols=35 Identities=26% Similarity=0.395 Sum_probs=30.2
Q ss_pred cEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCC
Q 010225 57 DVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (514)
Q Consensus 57 dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~ 93 (514)
+|+|||+|-.|.++|..|++.+ .|++|+++|++..
T Consensus 2 kI~VIGaG~vG~~la~~la~~~--~g~~V~l~D~~~~ 36 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQ--LARELVLLDVVEG 36 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--CCSEEEEECSSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCC--CCCEEEEEeCChh
Confidence 6999999999999999999842 1789999999763
No 351
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=90.74 E-value=0.21 Score=48.05 Aligned_cols=36 Identities=28% Similarity=0.468 Sum_probs=30.0
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCc--EEEEEcCCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHL--SVAIIDSNPA 93 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~--~V~viE~~~~ 93 (514)
++.+|+|||+|-+|.++|+.|+.. |+ .|.++|.+..
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~----~~~~ev~L~Di~~~ 43 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALR----QTANELVLIDVFKE 43 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHT----TCSSEEEEECCC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC----CCCCEEEEEeCChH
Confidence 346899999999999999999996 66 8999998753
No 352
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=90.73 E-value=0.21 Score=48.99 Aligned_cols=36 Identities=17% Similarity=0.228 Sum_probs=31.5
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
....+|.|||.|-.|..+|..|++. |++|+++++.+
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~----G~~V~v~dr~~ 55 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKG----GHECVVYDLNV 55 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSCH
T ss_pred hcCCEEEEECchHHHHHHHHHHHhC----CCEEEEEeCCH
Confidence 3456899999999999999999996 99999999876
No 353
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=90.73 E-value=0.22 Score=45.95 Aligned_cols=36 Identities=33% Similarity=0.509 Sum_probs=31.8
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~ 93 (514)
...+|.|||+|-.|.++|..|++. |++|+++++++.
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~----G~~V~~~~r~~~ 53 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADL----GHEVTIGTRDPK 53 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT----TCEEEEEESCHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC----CCEEEEEeCChh
Confidence 356899999999999999999996 999999998763
No 354
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=90.73 E-value=0.19 Score=48.34 Aligned_cols=33 Identities=33% Similarity=0.482 Sum_probs=29.2
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
..+|+|||+|-.|.++|..|++. |++|+++ +++
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~----G~~V~l~-~~~ 51 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARA----GHEVILI-ARP 51 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHT----TCEEEEE-CCH
T ss_pred CCcEEEECcCHHHHHHHHHHHHC----CCeEEEE-EcH
Confidence 46799999999999999999996 8999999 654
No 355
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=90.62 E-value=0.25 Score=47.66 Aligned_cols=35 Identities=29% Similarity=0.470 Sum_probs=31.1
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCc-EEEEEcCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNPA 93 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~-~V~viE~~~~ 93 (514)
..+|+|||+|-.|.++|..|+.. |+ +|+++|.+..
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~----~~~~v~L~Di~~~ 42 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLK----ELGDVVLFDIAEG 42 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT----TCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC----CCCeEEEEeCCch
Confidence 45899999999999999999996 67 9999998763
No 356
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=90.51 E-value=0.85 Score=46.86 Aligned_cols=39 Identities=21% Similarity=0.356 Sum_probs=31.1
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
...+|+|||+|-+|.-+|..|++.. .+.+|+++=|.+..
T Consensus 245 ~gKrV~VVG~G~SA~ei~~~L~~~~--~~~~v~~~~R~~~~ 283 (501)
T 4b63_A 245 KPYNIAVLGSGQSAAEIFHDLQKRY--PNSRTTLIMRDSAM 283 (501)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHS--TTCEEEEECSSSSC
T ss_pred CCcEEEEECCcHHHHHHHHHHHhcC--CCceEEEEeCCCcc
Confidence 3457999999999999999997631 26789999887643
No 357
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=90.49 E-value=0.22 Score=49.69 Aligned_cols=35 Identities=29% Similarity=0.456 Sum_probs=31.3
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~ 93 (514)
...|+|||+|.+|+.+|..|... |.+|+++|+...
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~----Ga~V~v~D~~~~ 206 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSL----GAIVRAFDTRPE 206 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHHC----CCEEEEEcCCHH
Confidence 45899999999999999999987 899999998763
No 358
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=90.45 E-value=0.25 Score=47.39 Aligned_cols=33 Identities=27% Similarity=0.504 Sum_probs=29.6
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCc-EEEEEcCCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNP 92 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~-~V~viE~~~ 92 (514)
.+|+|||+|-.|..+|..|+.. |+ +|.++|.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~----g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAK----ELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT----TCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHC----CCCeEEEEeCCc
Confidence 4799999999999999999986 65 899999875
No 359
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=90.45 E-value=0.22 Score=47.15 Aligned_cols=34 Identities=29% Similarity=0.451 Sum_probs=31.0
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~ 93 (514)
.+|.|||.|-.|..+|..|++. |++|+++++++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~----G~~V~~~dr~~~ 35 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKA----GCSVTIWNRSPE 35 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSGG
T ss_pred CEEEEEeecHHHHHHHHHHHHC----CCeEEEEcCCHH
Confidence 4699999999999999999996 999999998764
No 360
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=90.44 E-value=0.21 Score=48.18 Aligned_cols=35 Identities=31% Similarity=0.544 Sum_probs=30.3
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCc--EEEEEcCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHL--SVAIIDSNP 92 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~--~V~viE~~~ 92 (514)
...+|+|||+|..|.++|+.|+.. |+ +++++|.+.
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~----~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQ----GITDELVVIDVNK 40 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHH----TCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC----CCCceEEEEecch
Confidence 346899999999999999999985 66 899999865
No 361
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=90.42 E-value=0.18 Score=46.70 Aligned_cols=34 Identities=29% Similarity=0.389 Sum_probs=30.7
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCc-EEEEEcCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNP 92 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~-~V~viE~~~ 92 (514)
..+|+|||+|-.|..+|..|++. |+ +++|+|++.
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~----Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASA----GVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHH----TCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHc----CCCeEEEEcCCC
Confidence 35799999999999999999997 87 899999886
No 362
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=90.38 E-value=0.2 Score=50.13 Aligned_cols=35 Identities=23% Similarity=0.345 Sum_probs=31.6
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~ 93 (514)
+..|+|||.|..|..+|..|.+. |++|++||+++.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~----g~~vvvId~d~~ 38 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSS----GVKMVVLDHDPD 38 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT----TCCEEEEECCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHC----CCCEEEEECCHH
Confidence 34699999999999999999996 999999999864
No 363
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=90.37 E-value=0.18 Score=48.49 Aligned_cols=35 Identities=20% Similarity=0.290 Sum_probs=30.4
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCc-EEEEEcCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNP 92 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~-~V~viE~~~ 92 (514)
...+|.|||.|-.|..+|..|++. |+ +|+++++.+
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~----G~~~V~~~dr~~ 58 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQA----GAIDMAAYDAAS 58 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHH----SCCEEEEECSSC
T ss_pred CCCEEEEECccHHHHHHHHHHHHC----CCCeEEEEcCCC
Confidence 346899999999999999999996 89 999999863
No 364
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=90.14 E-value=0.24 Score=47.61 Aligned_cols=35 Identities=20% Similarity=0.198 Sum_probs=31.6
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCC-cEEEEEcCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKH-LSVAIIDSNPA 93 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g-~~V~viE~~~~ 93 (514)
..+|.|||.|-.|.++|..|++. | ++|+++++.+.
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~----G~~~V~~~dr~~~ 59 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGR----NAARLAAYDLRFN 59 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT----TCSEEEEECGGGG
T ss_pred CCeEEEECccHHHHHHHHHHHHc----CCCeEEEEeCCCc
Confidence 35799999999999999999996 9 99999998863
No 365
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=90.14 E-value=0.26 Score=48.79 Aligned_cols=36 Identities=22% Similarity=0.266 Sum_probs=31.8
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~ 93 (514)
...+|+|+|+|.+|+.+|..|... |.+|+++|+.+.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~----Ga~V~~~d~~~~ 206 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRL----GAVVMATDVRAA 206 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSCST
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC----CCEEEEEeCCHH
Confidence 356899999999999999999987 889999998763
No 366
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=90.12 E-value=0.3 Score=46.89 Aligned_cols=34 Identities=32% Similarity=0.411 Sum_probs=30.8
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCc--EEEEEcCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHL--SVAIIDSNP 92 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~--~V~viE~~~ 92 (514)
..+|.|||.|..|.++|..|++. |+ +|+++++++
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~----G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRS----GFKGKIYGYDINP 68 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHT----TCCSEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC----CCCCEEEEEECCH
Confidence 46899999999999999999996 88 999999876
No 367
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=90.03 E-value=0.24 Score=50.71 Aligned_cols=34 Identities=32% Similarity=0.395 Sum_probs=31.1
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~ 93 (514)
.+|.|||+|..|...|..|++. |++|+++|+++.
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~a----G~~V~l~D~~~e 39 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASH----GHQVLLYDISAE 39 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT----TCCEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHHC----CCeEEEEECCHH
Confidence 4799999999999999999996 999999998763
No 368
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=90.01 E-value=0.24 Score=50.48 Aligned_cols=36 Identities=25% Similarity=0.319 Sum_probs=32.0
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCc-EEEEEcCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNPA 93 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~-~V~viE~~~~ 93 (514)
..+|+|||+|-.|+.+|..|++. .|+ +|+++|+++.
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~---~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADA---PCFEKVLGFQRNSK 54 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHS---TTCCEEEEECCCCT
T ss_pred CCEEEEECcCHHHHHHHHHHHHh---CCCCeEEEEECChh
Confidence 35799999999999999999994 189 9999999875
No 369
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=89.97 E-value=0.32 Score=46.48 Aligned_cols=35 Identities=34% Similarity=0.490 Sum_probs=31.5
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
...+|.|||.|-.|..+|..|++. |++|+++++.+
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~----G~~V~~~dr~~ 42 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQ----GKRVAIWNRSP 42 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHT----TCCEEEECSSH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC----CCEEEEEeCCH
Confidence 346799999999999999999996 99999998876
No 370
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=89.88 E-value=0.089 Score=48.02 Aligned_cols=33 Identities=18% Similarity=0.286 Sum_probs=29.7
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDS 90 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~ 90 (514)
...+|.|||.|..|.++|..|++. |++|+++++
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~~----G~~V~~~~~ 37 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDSV----GHYVTVLHA 37 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHHT----TCEEEECSS
T ss_pred CCcEEEEEeeCHHHHHHHHHHHHC----CCEEEEecC
Confidence 345899999999999999999996 999999886
No 371
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=89.87 E-value=0.33 Score=46.77 Aligned_cols=35 Identities=26% Similarity=0.386 Sum_probs=30.8
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCc-EEEEEcCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNPA 93 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~-~V~viE~~~~ 93 (514)
..+|+|||+|..|.++|..|+.. |+ +|.++|.+..
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~----~~~~v~l~Di~~~ 40 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIK----QLGDVVLFDIAQG 40 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT----TCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC----CCceEEEEeCChH
Confidence 35799999999999999999986 66 9999998763
No 372
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=89.86 E-value=0.23 Score=48.79 Aligned_cols=36 Identities=25% Similarity=0.441 Sum_probs=32.1
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCc-EEEEEcCCC
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNP 92 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~-~V~viE~~~ 92 (514)
-.+.+|+|+|||.+|..+|..|... |. +|+++|++-
T Consensus 186 l~d~kVVi~GAGaAG~~iA~ll~~~----Ga~~I~v~D~~G 222 (398)
T 2a9f_A 186 LDEVSIVVNGGGSAGLSITRKLLAA----GATKVTVVDKFG 222 (398)
T ss_dssp TTSCEEEEECCSHHHHHHHHHHHHH----TCCEEEEEETTE
T ss_pred CCccEEEEECCCHHHHHHHHHHHHc----CCCeEEEEECCC
Confidence 3467899999999999999999997 77 999999875
No 373
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=89.86 E-value=0.28 Score=49.25 Aligned_cols=34 Identities=32% Similarity=0.409 Sum_probs=31.1
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
..+|+|||.|-+||.+|..|++. |++|+.+|-++
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~----G~~V~g~Did~ 54 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALL----GHRVVGYDVNP 54 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH----TCEEEEECSCH
T ss_pred CCEEEEEccCHHHHHHHHHHHhC----CCcEEEEECCH
Confidence 45899999999999999999986 99999999875
No 374
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=89.84 E-value=0.43 Score=46.09 Aligned_cols=34 Identities=21% Similarity=0.162 Sum_probs=29.9
Q ss_pred ccEEEECCCHHHHH-HHHHhccCCCCCCcEEEEEcCCCC
Q 010225 56 YDVAVVGGGMVGMA-LACSLASMPLTKHLSVAIIDSNPA 93 (514)
Q Consensus 56 ~dVvIVGgG~aGl~-~A~~L~~~~~~~g~~V~viE~~~~ 93 (514)
.+|.|||.|.+|++ +|..|.+. |++|++.|++..
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~----G~~V~~~D~~~~ 39 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEA----GFEVSGCDAKMY 39 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHT----TCEEEEEESSCC
T ss_pred cEEEEEEECHHHHHHHHHHHHhC----CCEEEEEcCCCC
Confidence 47999999999996 88888885 999999998763
No 375
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=89.83 E-value=0.22 Score=47.33 Aligned_cols=33 Identities=27% Similarity=0.505 Sum_probs=30.2
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
.+|.|||+|..|..+|..|++. |++|.++++++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~----g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKA----GYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT----TCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHhC----CCEEEEEeCCH
Confidence 4799999999999999999996 89999999875
No 376
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=89.79 E-value=0.25 Score=47.61 Aligned_cols=35 Identities=17% Similarity=0.409 Sum_probs=31.6
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
...+|.|||.|-.|..+|..|++. |++|+++++.+
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~----G~~V~~~dr~~ 64 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEA----GYALQVWNRTP 64 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHT----TCEEEEECSCH
T ss_pred CCCEEEEECccHHHHHHHHHHHhC----CCeEEEEcCCH
Confidence 345899999999999999999996 99999999876
No 377
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=89.78 E-value=0.27 Score=50.99 Aligned_cols=35 Identities=20% Similarity=0.353 Sum_probs=32.5
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
.+|+|||||..|+-+|..|++. |.+|+|+|+.+.+
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~----G~~Vtlv~~~~~~ 249 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNAT----GRRTVMLVRTEPL 249 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHHc----CCeEEEEEecCcc
Confidence 6899999999999999999996 9999999998855
No 378
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=89.75 E-value=0.21 Score=50.44 Aligned_cols=32 Identities=25% Similarity=0.332 Sum_probs=29.8
Q ss_pred cEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 57 DVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 57 dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
+|+|||+|-.|+.+|..|++. |++|+++++++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~----G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSAR----GHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHT----TCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHC----CCEEEEEECCH
Confidence 699999999999999999996 99999999875
No 379
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=89.71 E-value=0.27 Score=49.01 Aligned_cols=32 Identities=28% Similarity=0.326 Sum_probs=28.1
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDS 90 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~ 90 (514)
.+|+|||+|-.|.++|..|++. .|++|+++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~---~G~~V~~~~~ 34 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASR---DGVEVRVLTL 34 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTS---TTEEEEEECC
T ss_pred ceEEEECCCHHHHHHHHHHHhC---CCCEEEEEeC
Confidence 4799999999999999999872 2899999983
No 380
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=89.68 E-value=0.19 Score=45.86 Aligned_cols=34 Identities=9% Similarity=0.125 Sum_probs=30.0
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~ 93 (514)
...|+|||+|..|..+|..|.+. |+ |+++|+++.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~----g~-v~vid~~~~ 42 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGS----EV-FVLAEDENV 42 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTS----EE-EEEESCGGG
T ss_pred CCEEEEECCChHHHHHHHHHHhC----Ce-EEEEECCHH
Confidence 45799999999999999999986 89 999998764
No 381
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=89.57 E-value=0.27 Score=48.29 Aligned_cols=33 Identities=33% Similarity=0.461 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
..|+|+|+|.+|++++..|+.. |.+|+++++.+
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~----Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGL----GAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT----TCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC----CCEEEEEeCCH
Confidence 5899999999999999999997 88999999876
No 382
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=89.50 E-value=0.33 Score=48.67 Aligned_cols=34 Identities=24% Similarity=0.374 Sum_probs=30.6
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~ 93 (514)
..+|+|||.|-.|+.+|..|++ |++|+++|+++.
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~-----G~~V~~~D~~~~ 69 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ-----NHEVVALDIVQA 69 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-----TSEEEEECSCHH
T ss_pred CCEEEEECcCHHHHHHHHHHHc-----CCeEEEEecCHH
Confidence 3589999999999999999997 899999998763
No 383
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=89.47 E-value=0.3 Score=46.97 Aligned_cols=35 Identities=29% Similarity=0.540 Sum_probs=29.8
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCc--EEEEEcCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHL--SVAIIDSNP 92 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~--~V~viE~~~ 92 (514)
+..+|+|||+|..|.++|+.|+.. |+ .|.++|.+.
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~----~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQ----GIADEIVLIDANE 41 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHH----TCCSEEEEECSSH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhC----CCCCEEEEEeCCc
Confidence 346899999999999999999885 54 799999865
No 384
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=89.33 E-value=0.28 Score=47.29 Aligned_cols=34 Identities=18% Similarity=0.304 Sum_probs=30.5
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCC----cEEEEEcCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKH----LSVAIIDSNP 92 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g----~~V~viE~~~ 92 (514)
..+|.|||+|-.|.++|..|.+. | ++|+++++..
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~----G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAA----GVLAAHKIMASSPDM 59 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHT----TSSCGGGEEEECSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHC----CCCCcceEEEECCCc
Confidence 45799999999999999999996 7 7999999876
No 385
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=89.32 E-value=0.29 Score=44.07 Aligned_cols=33 Identities=27% Similarity=0.406 Sum_probs=30.0
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
.+|+|||+|-.|.++|..|++. |++|++++++.
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~----g~~V~~~~r~~ 61 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGS----GFKVVVGSRNP 61 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT----TCCEEEEESSH
T ss_pred CEEEEEccCHHHHHHHHHHHHC----CCEEEEEeCCH
Confidence 4799999999999999999996 89999999875
No 386
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=89.26 E-value=0.26 Score=47.01 Aligned_cols=33 Identities=24% Similarity=0.553 Sum_probs=28.9
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCc--EEEEEcCCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHL--SVAIIDSNP 92 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~--~V~viE~~~ 92 (514)
.+|+|||||-.|..+|+.|+.. |+ .|.|+|.+.
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~----g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAK----GIADRLVLLDLSE 49 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH----TCCSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhc----CCCCEEEEEcCCc
Confidence 5799999999999999999885 77 899999876
No 387
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=89.21 E-value=0.43 Score=45.38 Aligned_cols=33 Identities=24% Similarity=0.381 Sum_probs=30.0
Q ss_pred ccEEEEC-CCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 56 YDVAVVG-GGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 56 ~dVvIVG-gG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
.+|.||| +|-.|.++|..|++. |++|+++++++
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~----G~~V~~~~~~~ 55 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRAS----GYPISILDRED 55 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTT----TCCEEEECTTC
T ss_pred CEEEEEcCCCHHHHHHHHHHHhC----CCeEEEEECCc
Confidence 4699999 999999999999996 89999998765
No 388
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=89.16 E-value=0.3 Score=47.00 Aligned_cols=35 Identities=31% Similarity=0.525 Sum_probs=29.8
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCc--EEEEEcCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHL--SVAIIDSNP 92 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~--~V~viE~~~ 92 (514)
+..+|+|||+|-+|.++|+.|+.. |+ .+.++|.+.
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~----~~~~ei~L~Di~~ 41 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQ----SIVDELVIIDLDT 41 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH----CSCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC----CCCCEEEEEeCCh
Confidence 446899999999999999999985 54 799999764
No 389
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=89.14 E-value=0.24 Score=47.91 Aligned_cols=30 Identities=30% Similarity=0.425 Sum_probs=28.3
Q ss_pred cEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcC
Q 010225 57 DVAVVGGGMVGMALACSLASMPLTKHLSVAIIDS 90 (514)
Q Consensus 57 dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~ 90 (514)
+|.|||+|-.|.++|..|++. |++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~----g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDN----GNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHH----CCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhC----CCeEEEEEc
Confidence 599999999999999999996 899999998
No 390
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=89.12 E-value=0.21 Score=48.74 Aligned_cols=34 Identities=24% Similarity=0.219 Sum_probs=31.0
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCC-------cEEEEEcCCCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKH-------LSVAIIDSNPA 93 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g-------~~V~viE~~~~ 93 (514)
.+|+|||+|-.|.++|..|++. | ++|+++++++.
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~----g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGN----AAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH----HHHCTTEEEEEEEECCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhc----CCcccCCCCeEEEEEcChh
Confidence 5799999999999999999996 8 89999998874
No 391
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=88.90 E-value=0.29 Score=46.56 Aligned_cols=34 Identities=21% Similarity=0.306 Sum_probs=30.6
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
..+|.|||+|-.|...|..|++. |++|+++++.+
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~----g~~V~~~~~~~ 37 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKE----GVTVYAFDLME 37 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHT----TCEEEEECSSH
T ss_pred CCEEEEECccHHHHHHHHHHHHC----CCeEEEEeCCH
Confidence 45799999999999999999986 89999999865
No 392
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=88.52 E-value=0.3 Score=47.06 Aligned_cols=32 Identities=28% Similarity=0.453 Sum_probs=29.3
Q ss_pred cEEEECCCHHHHHHHHHhccCCCCCCc--EEEEEcCCC
Q 010225 57 DVAVVGGGMVGMALACSLASMPLTKHL--SVAIIDSNP 92 (514)
Q Consensus 57 dVvIVGgG~aGl~~A~~L~~~~~~~g~--~V~viE~~~ 92 (514)
+|+|||+|-.|.++|..|++. |+ +|+++|++.
T Consensus 2 kI~VIGaG~~G~~la~~l~~~----g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMK----GFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHH----TCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC----CCCCeEEEEeCCh
Confidence 699999999999999999986 88 999999875
No 393
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=88.39 E-value=0.41 Score=47.14 Aligned_cols=34 Identities=35% Similarity=0.476 Sum_probs=30.7
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
...|+|+|+|..|+.+|..|+.. |.+|+++++.+
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~----Ga~V~~~d~~~ 199 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGM----GAQVTILDVNH 199 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT----TCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC----CCEEEEEECCH
Confidence 36799999999999999999987 89999999865
No 394
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=88.37 E-value=0.4 Score=44.96 Aligned_cols=32 Identities=25% Similarity=0.358 Sum_probs=29.2
Q ss_pred cEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 57 DVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 57 dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
+|.|||+|-.|.++|..|.+. |++|+++++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~----g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRR----GHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHT----TCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHC----CCEEEEEECCH
Confidence 599999999999999999996 89999998765
No 395
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=88.35 E-value=0.19 Score=45.52 Aligned_cols=33 Identities=27% Similarity=0.493 Sum_probs=29.9
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCcEEEE-EcCCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAI-IDSNP 92 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~v-iE~~~ 92 (514)
.+|.|||+|-.|.++|..|++. |++|++ +++++
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~----g~~V~~v~~r~~ 57 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAA----QIPAIIANSRGP 57 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHT----TCCEEEECTTCG
T ss_pred CEEEEECCCHHHHHHHHHHHhC----CCEEEEEECCCH
Confidence 5799999999999999999996 899998 88765
No 396
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=88.35 E-value=0.37 Score=49.45 Aligned_cols=36 Identities=17% Similarity=0.254 Sum_probs=32.4
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~ 93 (514)
+..+|.|||.|..|..+|..|++. |++|+++++.+.
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~----G~~V~v~dr~~~ 44 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADH----GFTVCAYNRTQS 44 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSH
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHC----CCEEEEEeCCHH
Confidence 456899999999999999999996 999999998763
No 397
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=88.34 E-value=0.38 Score=49.15 Aligned_cols=35 Identities=26% Similarity=0.417 Sum_probs=31.4
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
.+.+|.|||.|..|.++|..|++. |++|+++++.+
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La~~----G~~V~v~~r~~ 48 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIESR----GYTVSIFNRSR 48 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHTT----TCCEEEECSSH
T ss_pred CCCeEEEEccHHHHHHHHHHHHhC----CCeEEEEeCCH
Confidence 356899999999999999999996 99999999875
No 398
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=88.30 E-value=0.46 Score=42.44 Aligned_cols=32 Identities=28% Similarity=0.425 Sum_probs=29.3
Q ss_pred cEEEEC-CCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 57 DVAVVG-GGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 57 dVvIVG-gG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
+|+||| +|-.|..+|..|++. |++|++++++.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~----g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATL----GHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTT----TCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHC----CCEEEEEeCCH
Confidence 599999 999999999999996 89999999865
No 399
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=88.28 E-value=0.48 Score=44.69 Aligned_cols=33 Identities=24% Similarity=0.434 Sum_probs=30.1
Q ss_pred ccEEEECC-CHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 56 YDVAVVGG-GMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 56 ~dVvIVGg-G~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
.+|.|||+ |-.|.++|..|++. |++|+++++.+
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~----g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDS----AHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHS----SSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhC----CCEEEEEECCH
Confidence 47999999 99999999999996 89999999765
No 400
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=88.26 E-value=0.35 Score=44.90 Aligned_cols=33 Identities=21% Similarity=0.303 Sum_probs=29.8
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCC----cEEEEEcCCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKH----LSVAIIDSNP 92 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g----~~V~viE~~~ 92 (514)
.+|.|||+|-.|.++|..|++. | ++|+++++.+
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~----g~~~~~~v~~~~~~~ 41 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANA----NIIKKENLFYYGPSK 41 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHH----TSSCGGGEEEECSSC
T ss_pred CEEEEECcCHHHHHHHHHHHHC----CCCCCCeEEEEeCCc
Confidence 4799999999999999999986 7 7899999876
No 401
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=88.18 E-value=0.33 Score=46.10 Aligned_cols=32 Identities=25% Similarity=0.307 Sum_probs=29.0
Q ss_pred cEEEECCCHHHHHHHHHhccCCCCCCc--EEEEEcCCC
Q 010225 57 DVAVVGGGMVGMALACSLASMPLTKHL--SVAIIDSNP 92 (514)
Q Consensus 57 dVvIVGgG~aGl~~A~~L~~~~~~~g~--~V~viE~~~ 92 (514)
+|+|||+|-.|.++|+.|++. |+ +|+++|.++
T Consensus 2 kI~ViGaG~vG~~la~~l~~~----~~~~~v~L~D~~~ 35 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLN----LDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHH----SCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC----CCCCeEEEEECCh
Confidence 699999999999999999986 66 899999876
No 402
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=88.04 E-value=0.42 Score=48.91 Aligned_cols=36 Identities=17% Similarity=0.484 Sum_probs=32.7
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
..+|+|||||+.|+-+|..|++. |.+|+++|+.+.+
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~----g~~Vtli~~~~~~ 226 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGL----GVKTTLLHRGDLI 226 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHHHc----CCeEEEEECCCcc
Confidence 46899999999999999999997 8999999998754
No 403
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=88.03 E-value=0.44 Score=47.03 Aligned_cols=34 Identities=32% Similarity=0.441 Sum_probs=30.8
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
...|+|||+|.+|+.+|..|+.. |.+|+++++..
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~----Ga~V~~~d~~~ 201 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGM----GATVTVLDINI 201 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT----TCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC----CCEEEEEeCCH
Confidence 46799999999999999999987 89999999865
No 404
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=88.03 E-value=0.36 Score=47.29 Aligned_cols=36 Identities=22% Similarity=0.308 Sum_probs=31.8
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCc-EEEEEcCCC
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNP 92 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~-~V~viE~~~ 92 (514)
..+.+|+|+|||-+|..+|..|... |. +|+|+|+.-
T Consensus 190 l~~~kVVv~GAGaAG~~iAkll~~~----G~~~I~v~Dr~G 226 (388)
T 1vl6_A 190 IEEVKVVVNGIGAAGYNIVKFLLDL----GVKNVVAVDRKG 226 (388)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHH----TCCEEEEEETTE
T ss_pred CCCcEEEEECCCHHHHHHHHHHHhC----CCCeEEEEECCC
Confidence 3567899999999999999999987 77 899999873
No 405
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=88.02 E-value=0.45 Score=46.20 Aligned_cols=34 Identities=24% Similarity=0.291 Sum_probs=30.8
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
..+|.|||.|..|.++|..|++. |++|+++++++
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~----G~~V~~~dr~~ 41 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAA----NHSVFGYNRSR 41 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHT----TCCEEEECSCH
T ss_pred CCEEEEEeecHHHHHHHHHHHHC----CCEEEEEeCCH
Confidence 45799999999999999999996 89999999776
No 406
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=87.86 E-value=0.43 Score=48.69 Aligned_cols=35 Identities=20% Similarity=0.350 Sum_probs=31.7
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~ 93 (514)
..+|.|||.|-.|..+|..|++. |++|+++++.+.
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~----G~~V~v~dr~~~ 38 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDH----GFVVCAFNRTVS 38 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT----TCCEEEECSSTH
T ss_pred CCEEEEEChhHHHHHHHHHHHHC----CCEEEEEeCCHH
Confidence 35799999999999999999996 999999998763
No 407
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=87.78 E-value=0.36 Score=45.93 Aligned_cols=33 Identities=21% Similarity=0.334 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
.+|.|||.|-.|..+|..|++. |++|+++++++
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~----G~~V~~~d~~~ 36 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKA----GYLLNVFDLVQ 36 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT----TCEEEEECSSH
T ss_pred CEEEEEeecHHHHHHHHHHHhC----CCeEEEEcCCH
Confidence 4799999999999999999996 99999999875
No 408
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=87.72 E-value=0.25 Score=46.70 Aligned_cols=33 Identities=27% Similarity=0.502 Sum_probs=30.5
Q ss_pred cEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCC
Q 010225 57 DVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (514)
Q Consensus 57 dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~ 93 (514)
+|.|||.|-.|..+|..|++. |++|+++++++.
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~----G~~V~~~dr~~~ 35 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRA----GFDVTVWNRNPA 35 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHH----TCCEEEECSSGG
T ss_pred eEEEEccCHHHHHHHHHHHHC----CCeEEEEcCCHH
Confidence 699999999999999999996 999999998764
No 409
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=87.69 E-value=0.49 Score=47.15 Aligned_cols=31 Identities=39% Similarity=0.637 Sum_probs=28.7
Q ss_pred cEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 57 DVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 57 dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
+|+|||+|-.|+.+|..|++ |++|+++++++
T Consensus 2 kI~VIG~G~vG~~~A~~La~-----G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-----QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-----TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-----CCEEEEEECCH
Confidence 69999999999999999998 78999999875
No 410
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=87.62 E-value=8.8 Score=40.73 Aligned_cols=37 Identities=16% Similarity=0.143 Sum_probs=30.1
Q ss_pred CcEEEEcccccccCCcccccchhhhHHHHHHHHHHHHhhh
Q 010225 393 KRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIA 432 (514)
Q Consensus 393 ~~v~LvGDAAh~~~P~~GqG~~~al~da~~La~~l~~~~~ 432 (514)
+|+.+.|++.+...+ .-+.-|++++...|+.|.+.+.
T Consensus 623 grl~FAGe~ts~~~~---g~v~GAi~SG~raA~~i~~~~~ 659 (662)
T 2z3y_A 623 PRLFFAGEHTIRNYP---ATVHGALLSGLREAGRIADQFL 659 (662)
T ss_dssp CCEEECSGGGCTTST---TSHHHHHHHHHHHHHHHHHHHT
T ss_pred CcEEEEeccccCCCC---cCHHHHHHHHHHHHHHHHHHcc
Confidence 799999999876443 4588899999999999888654
No 411
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=87.54 E-value=0.38 Score=44.61 Aligned_cols=32 Identities=25% Similarity=0.394 Sum_probs=29.2
Q ss_pred cEEEECCCHHHHHHHHHhccCCCCCC-cEEEEEcCCC
Q 010225 57 DVAVVGGGMVGMALACSLASMPLTKH-LSVAIIDSNP 92 (514)
Q Consensus 57 dVvIVGgG~aGl~~A~~L~~~~~~~g-~~V~viE~~~ 92 (514)
+|.|||+|-.|.++|..|++. | ++|+++++.+
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~----g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQ----GGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHH----CSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHC----CCCeEEEECCCH
Confidence 599999999999999999986 8 8999999865
No 412
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=87.48 E-value=0.4 Score=45.96 Aligned_cols=33 Identities=30% Similarity=0.523 Sum_probs=29.3
Q ss_pred cEEEECCCHHHHHHHHHhccCCCCCCc--EEEEEcCCCC
Q 010225 57 DVAVVGGGMVGMALACSLASMPLTKHL--SVAIIDSNPA 93 (514)
Q Consensus 57 dVvIVGgG~aGl~~A~~L~~~~~~~g~--~V~viE~~~~ 93 (514)
+|+|||+|..|.++|+.|++. |+ .++++|....
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~----~~~~el~l~D~~~~ 36 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQ----DVAKEVVMVDIKDG 36 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHH----TCSSEEEEECSSTT
T ss_pred EEEEECCCHHHHHHHHHHHhC----CCCCEEEEEeCchH
Confidence 699999999999999999985 65 8999998763
No 413
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=87.24 E-value=0.45 Score=45.77 Aligned_cols=36 Identities=28% Similarity=0.458 Sum_probs=30.2
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCc--EEEEEcCCC
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHL--SVAIIDSNP 92 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~--~V~viE~~~ 92 (514)
.+..+|+|||+|-+|.++|+.|+.. ++ .+.++|.+.
T Consensus 3 ~~~~KI~IiGaG~vG~~~a~~l~~~----~~~~el~L~Di~~ 40 (318)
T 1ez4_A 3 PNHQKVVLVGDGAVGSSYAFAMAQQ----GIAEEFVIVDVVK 40 (318)
T ss_dssp TTBCEEEEECCSHHHHHHHHHHHHH----TCCSEEEEECSSH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHcC----CCCCEEEEEeCCc
Confidence 3457899999999999999999985 44 799999754
No 414
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=87.22 E-value=0.4 Score=45.89 Aligned_cols=32 Identities=31% Similarity=0.453 Sum_probs=29.2
Q ss_pred cEEEECCCHHHHHHHHHhccCCCCCC--cEEEEEcCCC
Q 010225 57 DVAVVGGGMVGMALACSLASMPLTKH--LSVAIIDSNP 92 (514)
Q Consensus 57 dVvIVGgG~aGl~~A~~L~~~~~~~g--~~V~viE~~~ 92 (514)
+|+|||+|-.|.++|..|++. | .+|+++|++.
T Consensus 3 kI~VIGaG~~G~~la~~L~~~----g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQ----GVADDYVFIDANE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHH----TCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC----CCCCEEEEEcCCH
Confidence 699999999999999999986 7 6899999875
No 415
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=87.19 E-value=0.51 Score=44.29 Aligned_cols=32 Identities=34% Similarity=0.464 Sum_probs=29.0
Q ss_pred cEEEECCCHHHHHHHHHhccCCCCCCc--EEEEEcCCC
Q 010225 57 DVAVVGGGMVGMALACSLASMPLTKHL--SVAIIDSNP 92 (514)
Q Consensus 57 dVvIVGgG~aGl~~A~~L~~~~~~~g~--~V~viE~~~ 92 (514)
+|.|||+|..|.++|..|++. |+ +|+++++++
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~----g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRS----GFKGKIYGYDINP 36 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHT----TCCSEEEEECSCH
T ss_pred EEEEEecCHHHHHHHHHHHhc----CCCcEEEEEeCCH
Confidence 699999999999999999996 77 899998765
No 416
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=87.19 E-value=0.52 Score=44.13 Aligned_cols=33 Identities=21% Similarity=0.230 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
..|+|.|+|..|..++..|.+. |++|+++.|..
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~----g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQ----GWRIIGTSRNP 38 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGG----TCEEEEEESCG
T ss_pred CcEEEECCcHHHHHHHHHHHHC----CCEEEEEEcCh
Confidence 5799999999999999999996 99999999876
No 417
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=87.15 E-value=0.52 Score=47.87 Aligned_cols=36 Identities=22% Similarity=0.206 Sum_probs=31.1
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCc-EEEEEcCCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNPA 93 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~-~V~viE~~~~ 93 (514)
...+|+|||||.+|+-+|..+.+. |. +|+++++.+.
T Consensus 263 ~gk~VvVIGgG~~a~d~A~~~~r~----Ga~~Vtiv~r~~~ 299 (456)
T 2vdc_G 263 AGKHVVVLGGGDTAMDCVRTAIRQ----GATSVKCLYRRDR 299 (456)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHT----TCSEEEEECSSCS
T ss_pred CCCEEEEECCChhHHHHHHHHHHc----CCCEEEEEEeCCc
Confidence 346899999999999999999886 76 6999998874
No 418
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=87.15 E-value=0.57 Score=45.13 Aligned_cols=34 Identities=38% Similarity=0.425 Sum_probs=30.0
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCc--EEEEEcCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHL--SVAIIDSNP 92 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~--~V~viE~~~ 92 (514)
..+|+|||+|..|.++|+.|+.. |+ .|.++|.+.
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~----g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMK----DLADEVALVDVME 56 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHH----CCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC----CCCCeEEEEECCH
Confidence 46899999999999999999985 66 899999865
No 419
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=87.14 E-value=0.5 Score=44.53 Aligned_cols=34 Identities=12% Similarity=0.348 Sum_probs=30.5
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCc---EEEEEcCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHL---SVAIIDSNP 92 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~---~V~viE~~~ 92 (514)
..+|.|||+|-.|.++|..|.+. |+ +|+++++++
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~----g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIAN----GYDPNRICVTNRSL 39 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHT----TCCGGGEEEECSSS
T ss_pred CCEEEEEcccHHHHHHHHHHHHC----CCCCCeEEEEeCCH
Confidence 35799999999999999999996 77 899999876
No 420
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=87.12 E-value=0.33 Score=47.85 Aligned_cols=34 Identities=12% Similarity=0.168 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCC-------cEEEEEcCCCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKH-------LSVAIIDSNPA 93 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g-------~~V~viE~~~~ 93 (514)
.+|.|||+|-.|.++|..|++. | ++|+++++.+.
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~----G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTN----AKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHH----HHHCTTBCSCEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHc----CCccCCCCCeEEEEECChh
Confidence 3699999999999999999986 8 89999998764
No 421
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=87.02 E-value=0.56 Score=45.86 Aligned_cols=34 Identities=26% Similarity=0.507 Sum_probs=30.9
Q ss_pred cEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 57 DVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 57 dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
.|+|+|||..|..+|+.+++. |++|+++|.++..
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~----G~~vv~vd~~~~~ 36 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKA----GMKVVLVDKNPQA 36 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHT----TCEEEEEESCTTC
T ss_pred EEEEECCCHHHHHHHHHHHHC----CCEEEEEeCCCCC
Confidence 699999999999999999997 9999999987653
No 422
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=87.02 E-value=0.57 Score=50.47 Aligned_cols=34 Identities=29% Similarity=0.543 Sum_probs=31.2
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~ 93 (514)
.+|.|||+|..|...|..|+++ |++|+++|+++.
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~a----G~~V~l~D~~~~ 346 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILS----NYPVILKEVNEK 346 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT----TCCEEEECSSHH
T ss_pred cEEEEEcCCHhhHHHHHHHHhC----CCEEEEEECCHH
Confidence 4699999999999999999997 999999998863
No 423
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=86.89 E-value=0.53 Score=42.72 Aligned_cols=36 Identities=25% Similarity=0.224 Sum_probs=31.3
Q ss_pred CCccEEEECC-CHHHHHHHHHhccCCCCCCcEEEEEcCCCC
Q 010225 54 DQYDVAVVGG-GMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (514)
Q Consensus 54 ~~~dVvIVGg-G~aGl~~A~~L~~~~~~~g~~V~viE~~~~ 93 (514)
+...|+|.|| |-.|..++..|.+. |++|+++.|+..
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~----G~~V~~~~R~~~ 56 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNK----GHEPVAMVRNEE 56 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHT----TCEEEEEESSGG
T ss_pred CCCeEEEECCCChHHHHHHHHHHhC----CCeEEEEECChH
Confidence 3457999998 99999999999996 999999998763
No 424
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=86.86 E-value=0.4 Score=48.84 Aligned_cols=35 Identities=26% Similarity=0.472 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
.+|.|||.|-.|+.+|..|++.+ .|++|+++++++
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g--~G~~V~~~d~~~ 40 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMC--PEIRVTVVDVNE 40 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHC--TTSEEEEECSCH
T ss_pred cEEEEECCCHHHHHHHHHHHhcC--CCCEEEEEECCH
Confidence 47999999999999999999852 269999999875
No 425
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=86.82 E-value=0.51 Score=45.44 Aligned_cols=35 Identities=29% Similarity=0.469 Sum_probs=30.1
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCc--EEEEEcCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHL--SVAIIDSNP 92 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~--~V~viE~~~ 92 (514)
...+|+|||+|..|.++|+.|+.. |+ .+.++|...
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~----~~~~el~l~D~~~ 44 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQ----GIAQEIGIVDIFK 44 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH----TCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC----CCCCeEEEEeCCh
Confidence 346899999999999999999985 66 899999854
No 426
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=86.81 E-value=0.61 Score=43.66 Aligned_cols=34 Identities=18% Similarity=0.300 Sum_probs=30.4
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
...|+|+|+|-+|.++|..|++. |.+|+|+.|..
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~----G~~V~v~~R~~ 152 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSL----DCAVTITNRTV 152 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHc----CCEEEEEECCH
Confidence 45799999999999999999997 89999998765
No 427
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=86.81 E-value=0.5 Score=48.35 Aligned_cols=33 Identities=18% Similarity=0.333 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
.+|.|||.|..|..+|..|++. |++|+++++.+
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~----G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDH----GFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT----TCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHC----CCeEEEEeCCH
Confidence 4799999999999999999996 99999999875
No 428
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=86.78 E-value=0.67 Score=44.04 Aligned_cols=34 Identities=18% Similarity=0.204 Sum_probs=30.5
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCc-EEEEEcCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNP 92 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~-~V~viE~~~ 92 (514)
...|+|||+|.+|.++|..|++. |. +|+|+.|..
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~----G~~~V~v~nR~~ 175 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLST----AAERIDMANRTV 175 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT----TCSEEEEECSSH
T ss_pred CCEEEEECcHHHHHHHHHHHHHC----CCCEEEEEeCCH
Confidence 45799999999999999999996 87 899999875
No 429
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=86.77 E-value=0.55 Score=43.22 Aligned_cols=33 Identities=21% Similarity=0.420 Sum_probs=29.9
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCc----EEEEEcCCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHL----SVAIIDSNP 92 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~----~V~viE~~~ 92 (514)
.+|.|||+|-.|.++|..|.+. |+ +|.++++++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~----g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINK----NIVSSNQIICSDLNT 39 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT----TSSCGGGEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHhC----CCCCCCeEEEEeCCH
Confidence 4699999999999999999996 87 999999876
No 430
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=86.75 E-value=0.62 Score=43.48 Aligned_cols=35 Identities=26% Similarity=0.477 Sum_probs=31.6
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~ 93 (514)
...|+|+|+|-+|.++|..|++. |.+|+|+.|...
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~----G~~v~V~nRt~~ 152 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQ----GLQVSVLNRSSR 152 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHC----CCEEEEEeCCHH
Confidence 46899999999999999999997 889999998764
No 431
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=86.67 E-value=0.63 Score=45.67 Aligned_cols=37 Identities=30% Similarity=0.428 Sum_probs=29.3
Q ss_pred CCCCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 51 NNDDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 51 ~~~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
+...+++|+|+|+|-+|-.+|..|++ .++|+|.++..
T Consensus 12 ~~g~~mkilvlGaG~vG~~~~~~L~~-----~~~v~~~~~~~ 48 (365)
T 3abi_A 12 IEGRHMKVLILGAGNIGRAIAWDLKD-----EFDVYIGDVNN 48 (365)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHTT-----TSEEEEEESCH
T ss_pred ccCCccEEEEECCCHHHHHHHHHHhc-----CCCeEEEEcCH
Confidence 34456789999999999999999988 57899988764
No 432
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=86.63 E-value=0.53 Score=47.77 Aligned_cols=34 Identities=24% Similarity=0.195 Sum_probs=30.8
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
...|+|||||.+|...|..|.+. |.+|+|++++.
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~----ga~V~vi~~~~ 45 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEA----GARLTVNALTF 45 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT----TBEEEEEESSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC----cCEEEEEcCCC
Confidence 45799999999999999999997 99999999754
No 433
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=86.59 E-value=0.44 Score=45.10 Aligned_cols=32 Identities=28% Similarity=0.378 Sum_probs=29.6
Q ss_pred cEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 57 DVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 57 dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
+|.|||+|-.|..+|..|++. |++|+++++++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~----g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKH----GYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHT----TCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHC----CCEEEEEeCCH
Confidence 599999999999999999996 89999999876
No 434
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=86.56 E-value=0.65 Score=45.79 Aligned_cols=37 Identities=22% Similarity=0.213 Sum_probs=33.7
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
....++|+|||..|.++|..++.. |++|+|+|.++..
T Consensus 203 P~~rL~IfGAGhva~ala~~a~~l----g~~V~v~D~R~~~ 239 (386)
T 2we8_A 203 PRPRMLVFGAIDFAAAVAQQGAFL----GYRVTVCDARPVF 239 (386)
T ss_dssp CCCEEEEECCSTHHHHHHHHHHHT----TCEEEEEESCTTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC----CCEEEEECCchhh
Confidence 456899999999999999999998 9999999988765
No 435
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=86.51 E-value=0.39 Score=45.68 Aligned_cols=35 Identities=17% Similarity=0.253 Sum_probs=27.5
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
.+|.+||-|..|...|..|.+. |++|+++++.+..
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~----G~~V~v~dr~~~~ 40 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEA----GYELVVWNRTASK 40 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT----TCEEEEC------
T ss_pred CcEEEEecHHHHHHHHHHHHHC----CCeEEEEeCCHHH
Confidence 4699999999999999999996 9999999987754
No 436
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=86.34 E-value=1.7 Score=42.86 Aligned_cols=36 Identities=22% Similarity=0.494 Sum_probs=31.9
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~ 93 (514)
....|+|||+|..|..+|..+.+. |++|++++..+.
T Consensus 13 ~~k~IlIlG~G~~g~~la~aa~~~----G~~vi~~d~~~~ 48 (389)
T 3q2o_A 13 PGKTIGIIGGGQLGRMMALAAKEM----GYKIAVLDPTKN 48 (389)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHT----TCEEEEEESSTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc----CCEEEEEeCCCC
Confidence 345899999999999999999997 999999997653
No 437
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=86.22 E-value=0.88 Score=44.80 Aligned_cols=36 Identities=25% Similarity=0.450 Sum_probs=32.1
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~ 93 (514)
....|+|||+|..|..+|..+++. |++|.+++..+.
T Consensus 11 ~~~~IlIlG~G~lg~~la~aa~~l----G~~viv~d~~~~ 46 (377)
T 3orq_A 11 FGATIGIIGGGQLGKMMAQSAQKM----GYKVVVLDPSED 46 (377)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT----TCEEEEEESCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC----CCEEEEEECCCC
Confidence 346799999999999999999997 999999997654
No 438
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=86.14 E-value=0.76 Score=42.47 Aligned_cols=33 Identities=18% Similarity=0.262 Sum_probs=29.8
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
.+|.|||+|-.|...|..|.+. |+.|.++++++
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~----g~~v~~~~~~~ 36 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQT----PHELIISGSSL 36 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTS----SCEEEEECSSH
T ss_pred cEEEEECCCHHHHHHHHHHHhC----CCeEEEECCCH
Confidence 4799999999999999999986 88999999765
No 439
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=85.93 E-value=0.81 Score=44.13 Aligned_cols=35 Identities=40% Similarity=0.509 Sum_probs=30.2
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCc--EEEEEcCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHL--SVAIIDSNP 92 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~--~V~viE~~~ 92 (514)
...+|+|||+|-.|.++|+.|+.. |+ .+.|+|...
T Consensus 18 ~~~kV~ViGaG~vG~~~a~~l~~~----~~~~el~L~Di~~ 54 (331)
T 4aj2_A 18 PQNKITVVGVGAVGMACAISILMK----DLADELALVDVIE 54 (331)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHT----TCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC----CCCceEEEEeCCh
Confidence 356899999999999999999885 66 899999764
No 440
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=85.53 E-value=0.75 Score=43.58 Aligned_cols=35 Identities=31% Similarity=0.413 Sum_probs=31.2
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
....|.|||.|..|..+|..|+.. |.+|+++++..
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~----G~~V~~~dr~~ 188 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAAL----GAKVKVGARES 188 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT----TCEEEEEESSH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhC----CCEEEEEECCH
Confidence 346899999999999999999987 89999999865
No 441
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=85.44 E-value=0.76 Score=43.71 Aligned_cols=35 Identities=29% Similarity=0.396 Sum_probs=31.3
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
....|.|||+|..|..+|..|... |.+|+++++..
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~----G~~V~~~d~~~ 190 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAAL----GANVKVGARSS 190 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHT----TCEEEEEESSH
T ss_pred CCCEEEEEcccHHHHHHHHHHHHC----CCEEEEEECCH
Confidence 346799999999999999999986 89999999865
No 442
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=85.42 E-value=0.6 Score=47.66 Aligned_cols=32 Identities=38% Similarity=0.551 Sum_probs=29.7
Q ss_pred cEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 57 DVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 57 dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
+|.|||+|-.|..+|..|++. |++|+++++.+
T Consensus 3 kIgVIG~G~mG~~lA~~La~~----G~~V~v~dr~~ 34 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEK----GFKVAVFNRTY 34 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHT----TCCEEEECSSH
T ss_pred EEEEEChHHHHHHHHHHHHHC----CCEEEEEeCCH
Confidence 699999999999999999996 99999999865
No 443
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=85.39 E-value=0.58 Score=46.57 Aligned_cols=35 Identities=29% Similarity=0.380 Sum_probs=31.5
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
....|+|||.|.+|..+|..|... |.+|+++|+++
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~----Ga~Viv~D~dp 253 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAM----GSIVYVTEIDP 253 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSCH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHC----CCEEEEEeCCh
Confidence 456899999999999999999987 99999999876
No 444
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=85.35 E-value=0.58 Score=47.10 Aligned_cols=57 Identities=7% Similarity=-0.063 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCccccccccCCeeEEEeCCCcEEEeeE-EEecCCCch
Q 010225 171 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKL-VGADGGKSR 248 (514)
Q Consensus 171 ~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~ad~-V~AdG~~S~ 248 (514)
..+.+.|.+.+++.| ++|+++++|++|.. .++.+.....+|+++.||. |.|.|.++.
T Consensus 234 ~~l~~~l~~~~~~~G-~~i~~~~~V~~I~~--------------------~~~~v~~v~~~g~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 234 GELPQGFARLSAIYG-GTYMLNKPVDDIIM--------------------ENGKVVGVKSEGEVARCKQLICDPSYVPD 291 (433)
T ss_dssp THHHHHHHHHHHHHT-CCCBCSCCCCEEEE--------------------ETTEEEEEEETTEEEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcC-CEEECCCEEEEEEE--------------------eCCEEEEEEECCeEEECCEEEECCCCCcc
Confidence 578888988888877 89999999999986 3344443335788899999 999998874
No 445
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=85.30 E-value=0.58 Score=47.81 Aligned_cols=35 Identities=31% Similarity=0.493 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
.+|+|||.|-.|+.+|..|++.+ .|++|+++|+++
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g--~g~~V~~~D~~~ 44 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKC--PHITVTVVDMNT 44 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHC--TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhcC--CCCEEEEEECCH
Confidence 47999999999999999999852 168999999875
No 446
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=85.22 E-value=0.7 Score=46.84 Aligned_cols=35 Identities=26% Similarity=0.300 Sum_probs=31.4
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
....|+|+|+|..|.++|..|+.. |.+|+++|+++
T Consensus 264 ~GKtVvVtGaGgIG~aiA~~Laa~----GA~Viv~D~~~ 298 (488)
T 3ond_A 264 AGKVAVVAGYGDVGKGCAAALKQA----GARVIVTEIDP 298 (488)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSCH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHC----CCEEEEEcCCH
Confidence 456799999999999999999997 99999999865
No 447
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=84.97 E-value=0.66 Score=49.94 Aligned_cols=35 Identities=29% Similarity=0.361 Sum_probs=31.6
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~ 93 (514)
..+|.|||+|..|...|..|++. |++|+++|+++.
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~a----G~~V~l~D~~~~ 348 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASK----GTPILMKDINEH 348 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHT----TCCEEEECSSHH
T ss_pred CCEEEEECCChhhHHHHHHHHhC----CCEEEEEECCHH
Confidence 34799999999999999999997 999999998863
No 448
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=84.92 E-value=0.74 Score=46.94 Aligned_cols=34 Identities=32% Similarity=0.410 Sum_probs=30.8
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
+.+|.|||.|..|..+|..|++. |++|+++++.+
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~----G~~V~v~dr~~ 38 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESR----GYTVAIYNRTT 38 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHT----TCCEEEECSSH
T ss_pred CCcEEEEeeHHHHHHHHHHHHhC----CCEEEEEcCCH
Confidence 35799999999999999999996 89999999865
No 449
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=84.77 E-value=0.77 Score=44.52 Aligned_cols=33 Identities=30% Similarity=0.391 Sum_probs=29.9
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
..|.|||+|-.|.++|..|++. |++|+++++..
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~----G~~V~~~~~~~ 49 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDS----GVDVTVGLRSG 49 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT----TCCEEEECCTT
T ss_pred CEEEEECchHHHHHHHHHHHHC----cCEEEEEECCh
Confidence 4699999999999999999996 89999999875
No 450
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=84.77 E-value=0.74 Score=46.97 Aligned_cols=35 Identities=23% Similarity=0.323 Sum_probs=31.4
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
....|+|||.|..|..+|..|+.. |.+|+++|+.+
T Consensus 273 ~GktV~IiG~G~IG~~~A~~lka~----Ga~Viv~d~~~ 307 (494)
T 3ce6_A 273 GGKKVLICGYGDVGKGCAEAMKGQ----GARVSVTEIDP 307 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSCH
T ss_pred CcCEEEEEccCHHHHHHHHHHHHC----CCEEEEEeCCH
Confidence 446799999999999999999986 89999999876
No 451
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=84.77 E-value=0.71 Score=42.68 Aligned_cols=34 Identities=24% Similarity=0.375 Sum_probs=30.5
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCc-EEEEEcCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNP 92 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~-~V~viE~~~ 92 (514)
..+|+|||+|-.|..+|..|++. |+ +++|+|.+.
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~----Gvg~i~lvD~d~ 62 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGA----GVGTLVLADDDD 62 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHT----TCSEEEEECCCB
T ss_pred cCcEEEEccCHHHHHHHHHHHHc----CCCeEEEEeCCC
Confidence 45899999999999999999997 76 799999876
No 452
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=84.67 E-value=0.68 Score=48.38 Aligned_cols=35 Identities=23% Similarity=0.319 Sum_probs=32.7
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
..|+|||+|..|..+|..|.+. |++|+++|+++..
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~----g~~v~vid~d~~~ 383 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRK----PVPFILIDRQESP 383 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT----TCCEEEEESSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHHC----CCCEEEEECChHH
Confidence 6899999999999999999996 9999999999865
No 453
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=84.62 E-value=0.79 Score=44.17 Aligned_cols=35 Identities=29% Similarity=0.469 Sum_probs=29.6
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCc--EEEEEcCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHL--SVAIIDSNP 92 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~--~V~viE~~~ 92 (514)
++.+|+|||+|-+|.++|+.|+.. ++ .+.++|.+.
T Consensus 8 ~~~KI~IiGaG~vG~~la~~l~~~----~~~~el~L~Di~~ 44 (326)
T 2zqz_A 8 DHQKVILVGDGAVGSSYAYAMVLQ----GIAQEIGIVDIFK 44 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH----TCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHcC----CCCCEEEEEeCCc
Confidence 457899999999999999999885 44 799999754
No 454
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=84.48 E-value=1.1 Score=44.82 Aligned_cols=35 Identities=31% Similarity=0.533 Sum_probs=31.3
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
....|+|+|||..|..++..+++. |++|.+++..+
T Consensus 34 ~~~~IlIlG~G~lg~~~~~aa~~l----G~~v~v~d~~~ 68 (419)
T 4e4t_A 34 PGAWLGMVGGGQLGRMFCFAAQSM----GYRVAVLDPDP 68 (419)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSCT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC----CCEEEEECCCC
Confidence 456899999999999999999997 99999998764
No 455
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=84.25 E-value=0.69 Score=42.91 Aligned_cols=30 Identities=30% Similarity=0.273 Sum_probs=27.4
Q ss_pred cEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcC
Q 010225 57 DVAVVGGGMVGMALACSLASMPLTKHLSVAIIDS 90 (514)
Q Consensus 57 dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~ 90 (514)
+|.|||+|-.|.++|..|++. |++|+++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~----g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSR----GVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHT----TCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHC----CCeEEEeCC
Confidence 599999999999999999996 899999765
No 456
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=84.24 E-value=0.87 Score=46.21 Aligned_cols=34 Identities=35% Similarity=0.549 Sum_probs=30.3
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~ 93 (514)
..+|+|+|||-.|..+|..|.+ +++|.|+|++..
T Consensus 235 ~~~v~I~GgG~ig~~lA~~L~~-----~~~v~iIE~d~~ 268 (461)
T 4g65_A 235 YRRIMIVGGGNIGASLAKRLEQ-----TYSVKLIERNLQ 268 (461)
T ss_dssp CCEEEEECCSHHHHHHHHHHTT-----TSEEEEEESCHH
T ss_pred ccEEEEEcchHHHHHHHHHhhh-----cCceEEEecCHH
Confidence 3589999999999999999976 689999999864
No 457
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=84.21 E-value=0.93 Score=42.42 Aligned_cols=34 Identities=21% Similarity=0.310 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~ 93 (514)
..|+|.|+|..|..++..|.+. |++|+++.|...
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~----g~~V~~~~r~~~ 37 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQ----GHEVTGLRRSAQ 37 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT----TCCEEEEECTTS
T ss_pred CcEEEECCCHHHHHHHHHHHHC----CCEEEEEeCCcc
Confidence 4699999999999999999996 999999998764
No 458
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=84.07 E-value=1.1 Score=48.19 Aligned_cols=35 Identities=34% Similarity=0.545 Sum_probs=31.9
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~ 93 (514)
-..|.|||+|..|...|+.++.+ |++|+|+|..+.
T Consensus 316 i~~v~ViGaG~MG~gIA~~~a~a----G~~V~l~D~~~~ 350 (742)
T 3zwc_A 316 VSSVGVLGLGTMGRGIAISFARV----GISVVAVESDPK 350 (742)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT----TCEEEEECSSHH
T ss_pred ccEEEEEcccHHHHHHHHHHHhC----CCchhcccchHh
Confidence 46899999999999999999997 999999998763
No 459
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=84.00 E-value=0.73 Score=43.21 Aligned_cols=34 Identities=18% Similarity=0.236 Sum_probs=30.5
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
...|+|||+|-+|.++|..|.+. |.+|+++++..
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~----g~~V~v~~r~~ 162 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKE----GAKVFLWNRTK 162 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHH----TCEEEEECSSH
T ss_pred CCEEEEECchHHHHHHHHHHHHc----CCEEEEEECCH
Confidence 35799999999999999999996 78999999875
No 460
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=83.98 E-value=0.7 Score=43.27 Aligned_cols=34 Identities=12% Similarity=0.208 Sum_probs=30.7
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
...|+|+|+|-+|.++|..|++. |.+|+|+.|..
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~~----G~~v~v~~R~~ 152 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQA----QQNIVLANRTF 152 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHHT----TCEEEEEESSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHC----CCEEEEEECCH
Confidence 45799999999999999999997 89999999875
No 461
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=83.85 E-value=0.93 Score=43.94 Aligned_cols=34 Identities=29% Similarity=0.540 Sum_probs=28.9
Q ss_pred CccEEEECC-CHHHHHHHHHhccCCCCCCc--EEEEEcCCC
Q 010225 55 QYDVAVVGG-GMVGMALACSLASMPLTKHL--SVAIIDSNP 92 (514)
Q Consensus 55 ~~dVvIVGg-G~aGl~~A~~L~~~~~~~g~--~V~viE~~~ 92 (514)
..+|+|||+ |-.|.++|+.|... |+ +|+++|.+.
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~----g~~~evvLiDi~~ 44 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMM----RLTPNLCLYDPFA 44 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHT----TCCSCEEEECSCH
T ss_pred CCEEEEECCCChHHHHHHHHHHhc----CCCCEEEEEeCCc
Confidence 457999998 99999999998886 64 799999764
No 462
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=83.78 E-value=1.2 Score=42.08 Aligned_cols=33 Identities=21% Similarity=0.336 Sum_probs=29.3
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
...|+|+|+|-+|.++|..|++. | +|+|+.|..
T Consensus 128 ~k~vlV~GaGgiG~aia~~L~~~----G-~V~v~~r~~ 160 (287)
T 1nvt_A 128 DKNIVIYGAGGAARAVAFELAKD----N-NIIIANRTV 160 (287)
T ss_dssp SCEEEEECCSHHHHHHHHHHTSS----S-EEEEECSSH
T ss_pred CCEEEEECchHHHHHHHHHHHHC----C-CEEEEECCH
Confidence 35799999999999999999996 9 999998764
No 463
>3on5_A BH1974 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, oxidoreductase; 2.80A {Bacillus halodurans}
Probab=83.77 E-value=0.6 Score=45.50 Aligned_cols=37 Identities=14% Similarity=0.154 Sum_probs=33.5
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
....++|+|||..+.++|..++.. |++|+|+|.++..
T Consensus 198 p~~~L~I~GaGhva~aLa~la~~l----gf~V~v~D~R~~~ 234 (362)
T 3on5_A 198 PKERLIIFGAGPDVPPLVTFASNV----GFYTVVTDWRPNQ 234 (362)
T ss_dssp CCEEEEEECCSTTHHHHHHHHHHH----TEEEEEEESCGGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC----CCeEEEECCCccc
Confidence 357899999999999999999998 9999999988754
No 464
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=83.67 E-value=0.72 Score=43.58 Aligned_cols=35 Identities=29% Similarity=0.409 Sum_probs=31.0
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCc-EEEEEcCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNPA 93 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~-~V~viE~~~~ 93 (514)
..+|+|||+|-.|..+|..|++. |+ +++|+|.+..
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~a----GVG~i~lvD~D~V 71 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRC----GIGKLLLFDYDKV 71 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHH----TCSEEEEECCCBC
T ss_pred CCeEEEECcCHHHHHHHHHHHHc----CCCEEEEECCCcc
Confidence 46899999999999999999998 65 7999998763
No 465
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=83.64 E-value=1.2 Score=45.09 Aligned_cols=56 Identities=7% Similarity=-0.050 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHhcCCCceEEcCCeeEEEeeCCCCCCcccCCCCcccccccc--CCe-eEEEeCCCcEEEeeE-EEecCCC
Q 010225 171 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTK--GHL-AKLDLSDGTSLYAKL-VGADGGK 246 (514)
Q Consensus 171 ~~l~~~L~~~~~~~g~v~v~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~v~~~~g~~~~ad~-V~AdG~~ 246 (514)
..+.+.|.+.+++.| ++|+++++|++|.. . ++. +.|.. +|.++.||. |.|.|.+
T Consensus 242 ~~l~~al~~~~~~~G-~~i~~~~~V~~i~~--------------------~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~ 299 (453)
T 2bcg_G 242 GELPQGFARLSAIYG-GTYMLDTPIDEVLY--------------------KKDTGKFEGVKT-KLGTFKAPLVIADPTYF 299 (453)
T ss_dssp THHHHHHHHHHHHTT-CEEECSCCCCEEEE--------------------ETTTTEEEEEEE-TTEEEECSCEEECGGGC
T ss_pred HHHHHHHHHHHHHcC-CEEECCCEEEEEEE--------------------ECCCCeEEEEEE-CCeEEECCEEEECCCcc
Confidence 578889999998888 89999999999987 2 233 35555 578899999 9999998
Q ss_pred ch
Q 010225 247 SR 248 (514)
Q Consensus 247 S~ 248 (514)
+.
T Consensus 300 ~~ 301 (453)
T 2bcg_G 300 PE 301 (453)
T ss_dssp GG
T ss_pred ch
Confidence 64
No 466
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=83.53 E-value=1 Score=40.00 Aligned_cols=32 Identities=19% Similarity=0.298 Sum_probs=29.2
Q ss_pred cEEEECC-CHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 57 DVAVVGG-GMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 57 dVvIVGg-G~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
+|+|.|| |-.|..++..|.+. |++|+++.|++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~----g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNR----GHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT----TCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhC----CCEEEEEEcCc
Confidence 5999996 99999999999996 99999999876
No 467
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=83.39 E-value=0.8 Score=42.99 Aligned_cols=36 Identities=11% Similarity=0.201 Sum_probs=31.5
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCc-EEEEEcCCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNPAL 94 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~-~V~viE~~~~~ 94 (514)
...|+|+|+|-+|.++|..|++. |. +|+|+.|....
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~----G~~~v~v~~R~~~~ 153 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKI----VRPTLTVANRTMSR 153 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTT----CCSCCEEECSCGGG
T ss_pred CCEEEEECCcHHHHHHHHHHHHC----CCCEEEEEeCCHHH
Confidence 45799999999999999999997 88 89999988643
No 468
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=83.38 E-value=0.73 Score=42.82 Aligned_cols=33 Identities=18% Similarity=0.300 Sum_probs=29.6
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCcE-EEEEcCCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHLS-VAIIDSNP 92 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~~-V~viE~~~ 92 (514)
.+|.|||+|-.|..+|..|++. |++ |.++++++
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~----g~~~v~~~~~~~ 44 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRK----GFRIVQVYSRTE 44 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH----TCCEEEEECSSH
T ss_pred CeEEEEcCCHHHHHHHHHHHHC----CCeEEEEEeCCH
Confidence 4799999999999999999986 888 89998765
No 469
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=83.37 E-value=0.87 Score=43.95 Aligned_cols=34 Identities=21% Similarity=0.356 Sum_probs=29.1
Q ss_pred CCccEEEECC-CHHHHHHHHHhccCCCCCCc-------EEEEEcCC
Q 010225 54 DQYDVAVVGG-GMVGMALACSLASMPLTKHL-------SVAIIDSN 91 (514)
Q Consensus 54 ~~~dVvIVGg-G~aGl~~A~~L~~~~~~~g~-------~V~viE~~ 91 (514)
++.+|+|+|| |-.|.+++..|... |+ .|.++|..
T Consensus 4 ~~~KI~ViGaaG~VG~~l~~~L~~~----~~~~~~~~~ev~l~Di~ 45 (329)
T 1b8p_A 4 TPMRVAVTGAAGQICYSLLFRIANG----DMLGKDQPVILQLLEIP 45 (329)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTT----TTTCTTCCEEEEEECCS
T ss_pred CCCEEEEECCCChHHHHHHHHHHhC----CCcCCCCCCEEEEEcCC
Confidence 3468999998 99999999999885 54 79999876
No 470
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=83.07 E-value=1.1 Score=40.24 Aligned_cols=35 Identities=23% Similarity=0.396 Sum_probs=31.0
Q ss_pred ccEEEECC-CHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 56 YDVAVVGG-GMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 56 ~dVvIVGg-G~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
..|+|.|| |..|..++..|.+. |++|+++.|.+..
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~----g~~V~~~~r~~~~ 40 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNR----GFEVTAVVRHPEK 40 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTT----TCEEEEECSCGGG
T ss_pred CEEEEEcCCchHHHHHHHHHHHC----CCEEEEEEcCccc
Confidence 47999996 99999999999996 9999999998643
No 471
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=83.00 E-value=0.95 Score=43.36 Aligned_cols=32 Identities=28% Similarity=0.396 Sum_probs=28.6
Q ss_pred cEEEECC-CHHHHHHHHHhccCCCCCC--cEEEEEcCCC
Q 010225 57 DVAVVGG-GMVGMALACSLASMPLTKH--LSVAIIDSNP 92 (514)
Q Consensus 57 dVvIVGg-G~aGl~~A~~L~~~~~~~g--~~V~viE~~~ 92 (514)
+|+|||| |-.|.++|..|+.. | ..|.++|.+.
T Consensus 2 KI~IiGa~G~VG~~la~~L~~~----~~~~ev~L~Di~~ 36 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKNS----PLVSRLTLYDIAH 36 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHTC----TTCSEEEEEESSS
T ss_pred EEEEECCCChHHHHHHHHHHhC----CCCcEEEEEeCCc
Confidence 6999998 99999999999985 6 6899999875
No 472
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=82.89 E-value=1 Score=43.46 Aligned_cols=35 Identities=17% Similarity=0.412 Sum_probs=30.9
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCc-EEEEEcCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNPA 93 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~-~V~viE~~~~ 93 (514)
...|+|||+|-.|..+|..|++. |+ +++|+|.+..
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~a----GVg~ItlvD~D~V 69 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAW----GVRKITFVDNGTV 69 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT----TCCEEEEECCCBC
T ss_pred CCEEEEECCCHHHHHHHHHHHHc----CCCEEEEecCCEe
Confidence 46899999999999999999998 65 6999998763
No 473
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=82.85 E-value=0.82 Score=43.69 Aligned_cols=32 Identities=31% Similarity=0.507 Sum_probs=28.3
Q ss_pred cEEEECCCHHHHHHHHHhccCCCCCCc-EEEEEcCCC
Q 010225 57 DVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNP 92 (514)
Q Consensus 57 dVvIVGgG~aGl~~A~~L~~~~~~~g~-~V~viE~~~ 92 (514)
+|+|||+|-.|.++|+.|+.. |+ .|.++|.+.
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~----~l~el~L~Di~~ 33 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMR----GYDDLLLIARTP 33 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHH----TCSCEEEECSST
T ss_pred CEEEECcCHHHHHHHHHHHhC----CCCEEEEEcCCh
Confidence 489999999999999999885 66 599999875
No 474
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=82.56 E-value=1.1 Score=42.82 Aligned_cols=34 Identities=29% Similarity=0.288 Sum_probs=29.8
Q ss_pred CCccEEEECCC-HHHHHHHHHhccCCCCCCcEEEEEcCC
Q 010225 54 DQYDVAVVGGG-MVGMALACSLASMPLTKHLSVAIIDSN 91 (514)
Q Consensus 54 ~~~dVvIVGgG-~aGl~~A~~L~~~~~~~g~~V~viE~~ 91 (514)
...+|+|||+| ++|..+|..|... |..|+|+++.
T Consensus 176 ~gk~vvVIG~G~iVG~~~A~~L~~~----gAtVtv~nR~ 210 (320)
T 1edz_A 176 YGKKCIVINRSEIVGRPLAALLAND----GATVYSVDVN 210 (320)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTT----SCEEEEECSS
T ss_pred CCCEEEEECCCcchHHHHHHHHHHC----CCEEEEEeCc
Confidence 45789999999 6899999999996 8899999775
No 475
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=82.56 E-value=1 Score=41.61 Aligned_cols=33 Identities=24% Similarity=0.370 Sum_probs=30.0
Q ss_pred cEEEECCCHHHHHHHHHhccCCCCCCc-EEEEEcCCCC
Q 010225 57 DVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNPA 93 (514)
Q Consensus 57 dVvIVGgG~aGl~~A~~L~~~~~~~g~-~V~viE~~~~ 93 (514)
.|+|||+|-+|-+++..|.+. |. +|+|+.|...
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~----G~~~I~v~nR~~~ 143 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQM----GVKDIWVVNRTIE 143 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHT----TCCCEEEEESCHH
T ss_pred eEEEECcHHHHHHHHHHHHHc----CCCEEEEEeCCHH
Confidence 899999999999999999996 87 8999998753
No 476
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=82.53 E-value=12 Score=40.98 Aligned_cols=38 Identities=16% Similarity=0.110 Sum_probs=30.5
Q ss_pred CcEEEEcccccccCCcccccchhhhHHHHHHHHHHHHhhhc
Q 010225 393 KRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAV 433 (514)
Q Consensus 393 ~~v~LvGDAAh~~~P~~GqG~~~al~da~~La~~l~~~~~~ 433 (514)
+|+++.|++.+...+ .-+.-|++++...|+.|.+.+..
T Consensus 794 grL~FAGE~Ts~~~~---gtveGAi~SG~RAA~~Il~~l~~ 831 (852)
T 2xag_A 794 PRLFFAGEHTIRNYP---ATVHGALLSGLREAGRIADQFLG 831 (852)
T ss_dssp CCEEECSGGGCTTST---TSHHHHHHHHHHHHHHHHHHHHC
T ss_pred CcEEEEehhHhCCCC---cCHHHHHHHHHHHHHHHHHHhhC
Confidence 799999999876443 35788999999999888887654
No 477
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=82.48 E-value=0.87 Score=45.64 Aligned_cols=35 Identities=26% Similarity=0.351 Sum_probs=31.3
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~ 93 (514)
.-+..|||.|-.|+.+|..|++. |++|+++|+++.
T Consensus 11 ~~~~~ViGlGyvGlp~A~~La~~----G~~V~~~D~~~~ 45 (431)
T 3ojo_A 11 GSKLTVVGLGYIGLPTSIMFAKH----GVDVLGVDINQQ 45 (431)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHT----TCEEEEECSCHH
T ss_pred CCccEEEeeCHHHHHHHHHHHHC----CCEEEEEECCHH
Confidence 34689999999999999999997 999999999874
No 478
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=82.40 E-value=0.65 Score=43.83 Aligned_cols=32 Identities=19% Similarity=0.321 Sum_probs=28.9
Q ss_pred ccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 56 YDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 56 ~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
.+|.|||+|-.|..+|..|++. |++|++++ ++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~----g~~V~~~~-~~ 35 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARA----GHQLHVTT-IG 35 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHT----TCEEEECC-SS
T ss_pred CEEEEEccCHHHHHHHHHHHhC----CCEEEEEc-CH
Confidence 3799999999999999999996 89999998 54
No 479
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=83.12 E-value=0.26 Score=43.96 Aligned_cols=35 Identities=29% Similarity=0.332 Sum_probs=30.8
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~ 93 (514)
..+|.|||+|-.|.++|..|.+. |++|+++++...
T Consensus 19 ~~~I~iIG~G~mG~~la~~L~~~----G~~V~~~~r~~~ 53 (201)
T 2yjz_A 19 QGVVCIFGTGDFGKSLGLKMLQC----GYSVVFGSRNPQ 53 (201)
Confidence 45799999999999999999986 899999988753
No 480
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=82.22 E-value=1.3 Score=41.65 Aligned_cols=35 Identities=29% Similarity=0.390 Sum_probs=30.6
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCc-EEEEEcCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNP 92 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~-~V~viE~~~ 92 (514)
....|+|+|+|-+|.++|..|++. |. +|+|+.|..
T Consensus 126 ~~k~vlVlGaGG~g~aia~~L~~~----G~~~v~i~~R~~ 161 (283)
T 3jyo_A 126 KLDSVVQVGAGGVGNAVAYALVTH----GVQKLQVADLDT 161 (283)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHT----TCSEEEEECSSH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC----CCCEEEEEECCH
Confidence 345899999999999999999997 87 799998875
No 481
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=82.16 E-value=1.3 Score=38.71 Aligned_cols=34 Identities=15% Similarity=0.351 Sum_probs=30.7
Q ss_pred ccEEEECC-CHHHHHHHHHhccCCCCCCcEEEEEcCCCC
Q 010225 56 YDVAVVGG-GMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (514)
Q Consensus 56 ~dVvIVGg-G~aGl~~A~~L~~~~~~~g~~V~viE~~~~ 93 (514)
..|+|+|| |-.|..++..|.+. |++|+++.|++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~----g~~V~~~~r~~~ 38 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQA----GYEVTVLVRDSS 38 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT----TCEEEEEESCGG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHC----CCeEEEEEeChh
Confidence 46999999 99999999999996 899999998764
No 482
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=82.11 E-value=1.6 Score=42.99 Aligned_cols=37 Identities=19% Similarity=0.311 Sum_probs=31.9
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCCC
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~~ 93 (514)
.+...|+|+|+|..|..++..+.+. |++|.+++..+.
T Consensus 9 ~~~~~ili~g~g~~~~~~~~a~~~~----G~~v~~~~~~~~ 45 (391)
T 1kjq_A 9 PAATRVMLLGSGELGKEVAIECQRL----GVEVIAVDRYAD 45 (391)
T ss_dssp TTCCEEEEESCSHHHHHHHHHHHTT----TCEEEEEESSTT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHc----CCEEEEEECCCC
Confidence 3456899999999999999999996 999999997653
No 483
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=82.00 E-value=1.3 Score=41.00 Aligned_cols=35 Identities=23% Similarity=0.120 Sum_probs=30.2
Q ss_pred CCccEEEECC-C-HHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 54 DQYDVAVVGG-G-MVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 54 ~~~dVvIVGg-G-~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
....|+|.|| | -.|.++|..|++. |.+|++++++.
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~----G~~V~~~~r~~ 57 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLE----GADVVISDYHE 57 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHT----TCEEEEEESCH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHC----CCEEEEecCCH
Confidence 4457999999 7 5999999999996 99999998875
No 484
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=81.98 E-value=1.5 Score=41.23 Aligned_cols=35 Identities=11% Similarity=0.194 Sum_probs=30.6
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCc-EEEEEcCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNP 92 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~-~V~viE~~~ 92 (514)
....|+|+|+|-+|.++|..|++. |. +|+|+.|..
T Consensus 125 ~~k~vlvlGaGg~g~aia~~L~~~----G~~~v~v~~R~~ 160 (281)
T 3o8q_A 125 KGATILLIGAGGAARGVLKPLLDQ----QPASITVTNRTF 160 (281)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTT----CCSEEEEEESSH
T ss_pred cCCEEEEECchHHHHHHHHHHHhc----CCCeEEEEECCH
Confidence 346799999999999999999996 86 899998865
No 485
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=81.93 E-value=1.3 Score=39.62 Aligned_cols=32 Identities=25% Similarity=0.406 Sum_probs=29.3
Q ss_pred cEEEECC-CHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 57 DVAVVGG-GMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 57 dVvIVGg-G~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
+|+|.|| |-.|..++..|.+. |++|+++.|+.
T Consensus 2 kilVtGatG~iG~~l~~~L~~~----g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRR----GHEVLAVVRDP 34 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT----TCEEEEEESCH
T ss_pred EEEEEcCCCHHHHHHHHHHHHC----CCEEEEEEecc
Confidence 5999998 99999999999996 99999999875
No 486
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=81.89 E-value=1.4 Score=42.53 Aligned_cols=34 Identities=15% Similarity=0.312 Sum_probs=30.8
Q ss_pred CccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 55 QYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 55 ~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
...|.|||.|-.|..+|..|+.. |++|+++++..
T Consensus 150 g~~vgIIG~G~iG~~iA~~l~~~----G~~V~~~d~~~ 183 (334)
T 2dbq_A 150 GKTIGIIGLGRIGQAIAKRAKGF----NMRILYYSRTR 183 (334)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSC
T ss_pred CCEEEEEccCHHHHHHHHHHHhC----CCEEEEECCCc
Confidence 45799999999999999999986 99999999865
No 487
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=81.81 E-value=1.1 Score=41.56 Aligned_cols=32 Identities=31% Similarity=0.443 Sum_probs=29.4
Q ss_pred cEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 57 DVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 57 dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
.|+|||+|-+|.++|..|.+. |.+|+++++..
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~----g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREA----GLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHT----TCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHC----CCEEEEEECCH
Confidence 899999999999999999996 78999999875
No 488
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=81.69 E-value=1.8 Score=41.48 Aligned_cols=36 Identities=19% Similarity=0.359 Sum_probs=31.1
Q ss_pred CCccEEEECC-CHHHHHHHHHhccCCCCCCcEEEEEcCCCC
Q 010225 54 DQYDVAVVGG-GMVGMALACSLASMPLTKHLSVAIIDSNPA 93 (514)
Q Consensus 54 ~~~dVvIVGg-G~aGl~~A~~L~~~~~~~g~~V~viE~~~~ 93 (514)
....|+|.|| |-.|..++..|.+. |++|+++.|...
T Consensus 19 ~~~~vlVTGasG~iG~~l~~~L~~~----g~~V~~~~r~~~ 55 (330)
T 2pzm_A 19 SHMRILITGGAGCLGSNLIEHWLPQ----GHEILVIDNFAT 55 (330)
T ss_dssp TCCEEEEETTTSHHHHHHHHHHGGG----TCEEEEEECCSS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC----CCEEEEEECCCc
Confidence 3457999998 99999999999996 999999998653
No 489
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=81.67 E-value=1.4 Score=39.92 Aligned_cols=36 Identities=19% Similarity=0.372 Sum_probs=30.9
Q ss_pred CccEEEECC-CHHHHHHHHHhccCCCCCC-cEEEEEcCCCCC
Q 010225 55 QYDVAVVGG-GMVGMALACSLASMPLTKH-LSVAIIDSNPAL 94 (514)
Q Consensus 55 ~~dVvIVGg-G~aGl~~A~~L~~~~~~~g-~~V~viE~~~~~ 94 (514)
...|+|.|| |-.|..+|..|++. | ++|+++.|++..
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~----G~~~V~~~~R~~~~ 60 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADK----QTIKQTLFARQPAK 60 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTC----TTEEEEEEESSGGG
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhC----CCceEEEEEcChhh
Confidence 357999994 99999999999996 8 999999988643
No 490
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=81.54 E-value=1.4 Score=42.19 Aligned_cols=35 Identities=14% Similarity=0.210 Sum_probs=30.8
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCc-EEEEEcCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNP 92 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~-~V~viE~~~ 92 (514)
....|+|+|+|-+|.++|..|++. |. +|+|+.|..
T Consensus 153 ~gk~~lVlGaGG~g~aia~~L~~~----Ga~~V~i~nR~~ 188 (315)
T 3tnl_A 153 IGKKMTICGAGGAATAICIQAALD----GVKEISIFNRKD 188 (315)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHT----TCSEEEEEECSS
T ss_pred cCCEEEEECCChHHHHHHHHHHHC----CCCEEEEEECCC
Confidence 345799999999999999999996 88 899999874
No 491
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=81.49 E-value=0.97 Score=43.56 Aligned_cols=42 Identities=14% Similarity=0.320 Sum_probs=29.9
Q ss_pred cccCCCCCCccEEEECC-CHHHHHHHHHhccCCCCCC--cEEEEEcCCC
Q 010225 47 QSFTNNDDQYDVAVVGG-GMVGMALACSLASMPLTKH--LSVAIIDSNP 92 (514)
Q Consensus 47 ~~~~~~~~~~dVvIVGg-G~aGl~~A~~L~~~~~~~g--~~V~viE~~~ 92 (514)
++.++......|+|.|| |..|..++..|.+. | ++|+++++..
T Consensus 16 ~n~~~~~~~~~vlVtGatG~iG~~l~~~L~~~----g~~~~v~~~~~~~ 60 (346)
T 4egb_A 16 ENLYFQSNAMNILVTGGAGFIGSNFVHYMLQS----YETYKIINFDALT 60 (346)
T ss_dssp --------CEEEEEETTTSHHHHHHHHHHHHH----CTTEEEEEEECCC
T ss_pred cccccccCCCeEEEECCccHHHHHHHHHHHhh----CCCcEEEEEeccc
Confidence 33334445568999999 99999999999986 7 8888888765
No 492
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=81.40 E-value=1 Score=44.82 Aligned_cols=35 Identities=26% Similarity=0.368 Sum_probs=31.7
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
....|+|||.|.+|..+|..|... |.+|+++|+++
T Consensus 210 ~GktVgIiG~G~IG~~vA~~Lka~----Ga~Viv~D~~p 244 (436)
T 3h9u_A 210 AGKTACVCGYGDVGKGCAAALRGF----GARVVVTEVDP 244 (436)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSCH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHC----CCEEEEECCCh
Confidence 356899999999999999999997 99999999865
No 493
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=81.20 E-value=1.3 Score=44.15 Aligned_cols=34 Identities=29% Similarity=0.553 Sum_probs=30.6
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
+...|+|+|||..|..++..+.+. |++|.+++ .+
T Consensus 23 ~~~~I~ilGgG~lg~~l~~aa~~l----G~~v~~~d-~~ 56 (403)
T 3k5i_A 23 NSRKVGVLGGGQLGRMLVESANRL----NIQVNVLD-AD 56 (403)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHH----TCEEEEEE-ST
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC----CCEEEEEE-CC
Confidence 356899999999999999999997 99999999 44
No 494
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=81.19 E-value=1.5 Score=40.88 Aligned_cols=35 Identities=11% Similarity=0.098 Sum_probs=30.6
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCc-EEEEEcCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNP 92 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~-~V~viE~~~ 92 (514)
....|+|+|+|-+|.++|..|++. |. +|+|+.|..
T Consensus 119 ~~k~~lvlGaGg~~~aia~~L~~~----G~~~v~i~~R~~ 154 (272)
T 3pwz_A 119 RNRRVLLLGAGGAVRGALLPFLQA----GPSELVIANRDM 154 (272)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHT----CCSEEEEECSCH
T ss_pred cCCEEEEECccHHHHHHHHHHHHc----CCCEEEEEeCCH
Confidence 346799999999999999999997 86 899998865
No 495
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=80.83 E-value=1.1 Score=44.71 Aligned_cols=36 Identities=31% Similarity=0.279 Sum_probs=31.8
Q ss_pred CCCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCCC
Q 010225 53 DDQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSNP 92 (514)
Q Consensus 53 ~~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~~ 92 (514)
-....|+|||.|..|..+|..|... |.+|+++|+++
T Consensus 245 L~GKTVgVIG~G~IGr~vA~~lraf----Ga~Viv~d~dp 280 (464)
T 3n58_A 245 MAGKVAVVCGYGDVGKGSAQSLAGA----GARVKVTEVDP 280 (464)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSH
T ss_pred ccCCEEEEECcCHHHHHHHHHHHHC----CCEEEEEeCCc
Confidence 3456899999999999999999987 99999999865
No 496
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=80.80 E-value=1.1 Score=44.50 Aligned_cols=35 Identities=29% Similarity=0.375 Sum_probs=30.5
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCc-EEEEEcCCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHL-SVAIIDSNP 92 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~-~V~viE~~~ 92 (514)
....|+|||+|..|.++|..|... |. +|+++++..
T Consensus 166 ~g~~VlIiGaG~iG~~~a~~l~~~----G~~~V~v~~r~~ 201 (404)
T 1gpj_A 166 HDKTVLVVGAGEMGKTVAKSLVDR----GVRAVLVANRTY 201 (404)
T ss_dssp TTCEEEEESCCHHHHHHHHHHHHH----CCSEEEEECSSH
T ss_pred cCCEEEEEChHHHHHHHHHHHHHC----CCCEEEEEeCCH
Confidence 345799999999999999999986 88 899998765
No 497
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=80.77 E-value=1.1 Score=43.20 Aligned_cols=34 Identities=24% Similarity=0.356 Sum_probs=29.2
Q ss_pred CccEEEEC-CCHHHHHHHHHhccCCCCCC--cEEEEEcCCC
Q 010225 55 QYDVAVVG-GGMVGMALACSLASMPLTKH--LSVAIIDSNP 92 (514)
Q Consensus 55 ~~dVvIVG-gG~aGl~~A~~L~~~~~~~g--~~V~viE~~~ 92 (514)
..+|+||| +|-.|.++|..|+.. | ..|.++|.+.
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~----g~~~ev~l~Di~~ 44 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMN----PLVSVLHLYDVVN 44 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHC----TTEEEEEEEESSS
T ss_pred CCEEEEECCCChHHHHHHHHHHhC----CCCCEEEEEeCCC
Confidence 35799999 799999999999885 6 7899999765
No 498
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=80.63 E-value=0.89 Score=48.77 Aligned_cols=36 Identities=22% Similarity=0.188 Sum_probs=32.3
Q ss_pred CccEEEEC--CCHHHHHHHHHhccCCCCCCcEEEEEcCCCCC
Q 010225 55 QYDVAVVG--GGMVGMALACSLASMPLTKHLSVAIIDSNPAL 94 (514)
Q Consensus 55 ~~dVvIVG--gG~aGl~~A~~L~~~~~~~g~~V~viE~~~~~ 94 (514)
..+|+||| ||.+|+-+|..|++. |.+|+++++.+..
T Consensus 523 g~~VvViG~ggG~~g~e~A~~L~~~----g~~Vtlv~~~~~l 560 (690)
T 3k30_A 523 GKKVVVYDDDHYYLGGVVAELLAQK----GYEVSIVTPGAQV 560 (690)
T ss_dssp SSEEEEEECSCSSHHHHHHHHHHHT----TCEEEEEESSSST
T ss_pred CCEEEEEcCCCCccHHHHHHHHHhC----CCeeEEEeccccc
Confidence 35699999 999999999999996 8999999998755
No 499
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=80.62 E-value=1.3 Score=42.67 Aligned_cols=34 Identities=24% Similarity=0.431 Sum_probs=28.9
Q ss_pred CccEEEECC-CHHHHHHHHHhccCCCCCCc-------EEEEEcCCC
Q 010225 55 QYDVAVVGG-GMVGMALACSLASMPLTKHL-------SVAIIDSNP 92 (514)
Q Consensus 55 ~~dVvIVGg-G~aGl~~A~~L~~~~~~~g~-------~V~viE~~~ 92 (514)
..+|+|+|| |..|..++..|.+. |+ +|.++|+.+
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~----g~~~~~~~~ev~l~D~~~ 45 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAG----EMLGKDQPVILQLLEIPQ 45 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTT----TTTCTTCCEEEEEECCGG
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC----CCCCCCCCCEEEEEeCCC
Confidence 357999998 99999999999885 64 899998753
No 500
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=80.45 E-value=1.6 Score=42.65 Aligned_cols=34 Identities=29% Similarity=0.332 Sum_probs=30.0
Q ss_pred CCccEEEECCCHHHHHHHHHhccCCCCCCcEEEEEcCC
Q 010225 54 DQYDVAVVGGGMVGMALACSLASMPLTKHLSVAIIDSN 91 (514)
Q Consensus 54 ~~~dVvIVGgG~aGl~~A~~L~~~~~~~g~~V~viE~~ 91 (514)
....|+|+|.|-.|..+|..|.+. |.+|++.|++
T Consensus 172 ~GktV~V~G~G~VG~~~A~~L~~~----GakVvv~D~~ 205 (364)
T 1leh_A 172 EGLAVSVQGLGNVAKALCKKLNTE----GAKLVVTDVN 205 (364)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSC
T ss_pred CcCEEEEECchHHHHHHHHHHHHC----CCEEEEEcCC
Confidence 446799999999999999999997 9999998853
Done!