BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010229
(514 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8L844|PP413_ARATH Pentatricopeptide repeat-containing protein At5g42310,
mitochondrial OS=Arabidopsis thaliana GN=At5g42310 PE=2
SV=1
Length = 709
Score = 372 bits (954), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/432 (42%), Positives = 269/432 (62%)
Query: 81 NKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVC 140
N I K GD +A+ LL QA G + + S+I ALA GRTLEA+A+F+E+
Sbjct: 273 NDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQ 332
Query: 141 FGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDD 200
G P+ R YN LL+G++K G L ++ ME G+ ++ TY +L+D +VNAGR +
Sbjct: 333 SGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWES 392
Query: 201 TWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIID 260
+++ EM + Q NSFV+ +++ +RD G W+K +++E++ +G+ DRQ YN +ID
Sbjct: 393 ARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVID 452
Query: 261 TFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYP 320
TFGK+ L A+ F++M E I PD VTWN+LI HCK G A E+F M+ +G P
Sbjct: 453 TFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLP 512
Query: 321 DPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECI 380
+ +I+ G+ +WD +K+ MK +G + LVD+YG+ GRF D EC+
Sbjct: 513 CATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECL 572
Query: 381 AALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVA 440
+K GL+PS +M+ L NAYAQ+GL EQ V ++M +G++P+L+ LN LINAFG
Sbjct: 573 EEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGED 632
Query: 441 GKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKAR 500
+ EA +V MK+ G+ PD+VTY+TLMKA IR KF KVP +Y++M SGC PDRKAR
Sbjct: 633 RRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKAR 692
Query: 501 QILQSALVVLEQ 512
+L+SAL ++Q
Sbjct: 693 SMLRSALRYMKQ 704
Score = 155 bits (392), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 97/422 (22%), Positives = 198/422 (46%), Gaps = 8/422 (1%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAI---- 134
+YN I C + DI++A+ L+A+M+ G+ ++Y+ +I++L R+ + D++
Sbjct: 199 TYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLT---RSNKIDSVMLLR 255
Query: 135 -FQEMVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHV 193
++E+ ++ N ++ GF K G +LL + + G+ T ++
Sbjct: 256 LYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALA 315
Query: 194 NAGRLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQ 253
++GR + + E+R G + + Y ++ Y G K A +V E+ + G+S D
Sbjct: 316 DSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEH 375
Query: 254 IYNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQM 313
Y+ +ID + G A V ++M+ ++P+ ++ L+ G+ K ++ +M
Sbjct: 376 TYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEM 435
Query: 314 QEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRF 373
+ G PD + + +I G+ D F+ M G + L+D + ++GR
Sbjct: 436 KSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRH 495
Query: 374 RDPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVL 433
EE A++ G P + + I+ N+Y Q + ++L M+ +GI PN+V L
Sbjct: 496 IVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTL 555
Query: 434 INAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGC 493
++ +G +G++ +A+ MK +G+ P Y+ L+ A+ + + ++ M S G
Sbjct: 556 VDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGL 615
Query: 494 TP 495
P
Sbjct: 616 KP 617
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 114/246 (46%), Gaps = 9/246 (3%)
Query: 254 IYNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQM 313
+Y+ +I G+ +L EA F Q++++ P +T+N+LI + D+ KAL L +M
Sbjct: 169 LYSILIHALGRSEKLYEA---FLLSQKQTLTP--LTYNALIGACARNNDIEKALNLIAKM 223
Query: 314 QEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRF 373
++ G+ D + +I L K D + K+ K+ ++ DI + +
Sbjct: 224 RQDGYQSDFVNYSLVIQSLTRSNKIDSVML-LRLYKEIERDKLELDVQLVNDIIMGFAKS 282
Query: 374 RDPEECIAALKL---EGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVML 430
DP + + L + GL + + +A A G + + + + GI+P
Sbjct: 283 GDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAY 342
Query: 431 NVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMES 490
N L+ + G K+A S+ M+ G+SPD TYS L+ A++ A ++ + K+ME+
Sbjct: 343 NALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEA 402
Query: 491 SGCTPD 496
P+
Sbjct: 403 GDVQPN 408
>sp|Q9FFZ2|PP402_ARATH Putative pentatricopeptide repeat-containing protein At5g36300
OS=Arabidopsis thaliana GN=At5g36300 PE=3 SV=3
Length = 330
Score = 282 bits (721), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 169/420 (40%), Positives = 228/420 (54%), Gaps = 103/420 (24%)
Query: 71 SGEEFSGNSYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLE 130
S S + YN I+Y C+ G+ +EAM+LLA++ +LG P +SY S IE LAS+ RTLE
Sbjct: 5 SHTRISLSMYNSWIRYFCRTGETNEAMSLLAEIHSLGSRPDPLSYVSFIETLASLRRTLE 64
Query: 131 ADAIFQEMVCFGF--NPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEIL 188
ADA+F E+V F + +R YN L+ +L+K
Sbjct: 65 ADALFHEVVRFMIYGSYSVRLYNALVSRYLRK---------------------------- 96
Query: 189 LDYHVNAGRLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGL 248
+ +W ++NEM+ + F+LNSFVYGK+I +YRDNGMWKKA+GIVEEIRE+GL
Sbjct: 97 ----------EVSWRVVNEMKKRKFRLNSFVYGKIIRIYRDNGMWKKALGIVEEIREIGL 146
Query: 249 SLDRQIYNSIIDTFGKYGELVEALEVFEKMQQES-IRPDIVTWNSLIRWHCKAGDVAKAL 307
+D +IYNS+IDTFGKYGEL E L+V EK+Q+ S RP+I TWNSLIRWHC G V AL
Sbjct: 147 PMDVEIYNSVIDTFGKYGELDEELQVLEKLQRSSDSRPNIRTWNSLIRWHCHHGAVDMAL 206
Query: 308 ELFTQMQEQGFYPDPKIFITIISCLGEL-GKWDVIKKNFENMKDRGHGKIGAIYAILVDI 366
ELFT + E +GEL GK +K +G ++ L +
Sbjct: 207 ELFTMIFED---------------IGELVGK----------LKSQGVAPSANLFCTLANA 241
Query: 367 YGQYGRFRDPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPN 426
Y Q G + + + ++ EG++P+ M +L NA
Sbjct: 242 YAQQGLCKQTVKVLKMMENEGIEPNLIMLNVLINA------------------------- 276
Query: 427 LVMLNVLINAFGVAGKYKEALSVYHLMKD-IGISPDLVTYSTLMKAFIRAKKFHKVPEIY 485
FG AGK+ EALS+YH +K+ + I PD+VTYSTLMKAF RAKK+ V Y
Sbjct: 277 ----------FGTAGKHMEALSIYHHIKETVWIHPDVVTYSTLMKAFTRAKKYEMVCSFY 326
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/274 (18%), Positives = 103/274 (37%), Gaps = 54/274 (19%)
Query: 284 RPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGK------ 337
R + +NS IR+ C+ G+ +A+ L ++ G PDP +++ I L L +
Sbjct: 8 RISLSMYNSWIRYFCRTGETNEAMSLLAEIHSLGSRPDPLSYVSFIETLASLRRTLEADA 67
Query: 338 --------------------------------WDVIKKNFENMKDRGHGKIGAIYAILVD 365
W V+ + MK R +Y ++
Sbjct: 68 LFHEVVRFMIYGSYSVRLYNALVSRYLRKEVSWRVVNE----MKKRKFRLNSFVYGKIIR 123
Query: 366 IYGQYGRFRDPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQ-LMEPEGIE 424
IY G ++ + ++ GL ++ + + + + G ++ ++VL+ L
Sbjct: 124 IYRDNGMWKKALGIVEEIREIGLPMDVEIYNSVIDTFGKYGELDEELQVLEKLQRSSDSR 183
Query: 425 PNLVMLNVLINAFGVAGKYKEALSVYHL-----------MKDIGISPDLVTYSTLMKAFI 473
PN+ N LI G AL ++ + +K G++P + TL A+
Sbjct: 184 PNIRTWNSLIRWHCHHGAVDMALELFTMIFEDIGELVGKLKSQGVAPSANLFCTLANAYA 243
Query: 474 RAKKFHKVPEIYKQMESSGCTPDRKARQILQSAL 507
+ + ++ K ME+ G P+ +L +A
Sbjct: 244 QQGLCKQTVKVLKMMENEGIEPNLIMLNVLINAF 277
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 193 bits (490), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 211/421 (50%), Gaps = 3/421 (0%)
Query: 89 KLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLE-ADAIFQEMVCFGFNPKL 147
+L ID+A++++ QA GF P +SY ++++A R + A+ +F+EM+ +P +
Sbjct: 146 RLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNV 205
Query: 148 RFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINE 207
YNIL+RGF G + + L ME G N TY L+D + ++DD + ++
Sbjct: 206 FTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRS 265
Query: 208 MRSKGFQLNSFVYGKVI-GLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYG 266
M KG + N Y VI GL R+ G K+ ++ E+ G SLD YN++I + K G
Sbjct: 266 MALKGLEPNLISYNVVINGLCRE-GRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEG 324
Query: 267 ELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFI 326
+AL + +M + + P ++T+ SLI CKAG++ +A+E QM+ +G P+ + +
Sbjct: 325 NFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYT 384
Query: 327 TIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLE 386
T++ + G + + M D G Y L++ + G+ D + +K +
Sbjct: 385 TLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEK 444
Query: 387 GLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEA 446
GL P + + + + + ++ ++V + M +GI+P+ + + LI F + KEA
Sbjct: 445 GLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEA 504
Query: 447 LSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQILQSA 506
+Y M +G+ PD TY+ L+ A+ K +++ +M G PD +L +
Sbjct: 505 CDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLING 564
Query: 507 L 507
L
Sbjct: 565 L 565
Score = 148 bits (374), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 101/440 (22%), Positives = 195/440 (44%), Gaps = 15/440 (3%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+YN I+ C G+ID A+ L +M+ G P+ ++Y +LI+ + + + + + M
Sbjct: 207 TYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSM 266
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
G P L YN+++ G ++G + S +L M G ++ TY L+ + G
Sbjct: 267 ALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNF 326
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSI 258
++ EM G + Y +I G +A+ ++++R GL + + Y ++
Sbjct: 327 HQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTL 386
Query: 259 IDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGF 318
+D F + G + EA V +M P +VT+N+LI HC G + A+ + M+E+G
Sbjct: 387 VDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGL 446
Query: 319 YPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEE 378
PD + T++S D + M ++G Y+ L+ + + R ++ +
Sbjct: 447 SPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACD 506
Query: 379 CIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFG 438
+ GL P + L NAY +G E+ +++ M +G+ P++V +VLIN
Sbjct: 507 LYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLN 566
Query: 439 VAGKYKEALSV---------------YHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPE 483
+ +EA + YH + + + + + +L+K F + +
Sbjct: 567 KQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQ 626
Query: 484 IYKQMESSGCTPDRKARQIL 503
+++ M PD A I+
Sbjct: 627 VFESMLGKNHKPDGTAYNIM 646
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/421 (23%), Positives = 191/421 (45%), Gaps = 15/421 (3%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
SYN I C+ G + E +L +M G+ ++Y +LI+ G +A + EM
Sbjct: 277 SYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEM 336
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
+ G P + Y L+ K G + L M G+C N+ TY L+D G +
Sbjct: 337 LRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYM 396
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSI 258
++ + ++ EM GF + Y +I + G + A+ ++E+++E GLS D Y+++
Sbjct: 397 NEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTV 456
Query: 259 IDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGF 318
+ F + ++ EAL V +M ++ I+PD +T++SLI+ C+ +A +L+ +M G
Sbjct: 457 LSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGL 516
Query: 319 YPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEE 378
PD + +I+ G + + M ++G Y++L++ + R R+ +
Sbjct: 517 PPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKR 576
Query: 379 CIAALKLEGLQPSGSMF---------------CILANAYAQQGLCEQTVKVLQLMEPEGI 423
+ L E PS + L + +G+ + +V + M +
Sbjct: 577 LLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNH 636
Query: 424 EPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPE 483
+P+ N++I+ AG ++A ++Y M G VT L+KA + K +++
Sbjct: 637 KPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNS 696
Query: 484 I 484
+
Sbjct: 697 V 697
Score = 35.8 bits (81), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%)
Query: 77 GNSYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAI 134
G +YN I C+ GDI +A L +M GF +++ +L++AL G+ E +++
Sbjct: 640 GTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSV 697
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 429 MLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPE-IYKQ 487
+ ++++ ++ +ALS+ HL + G P +++Y+ ++ A IR+K+ E ++K+
Sbjct: 136 VFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKE 195
Query: 488 MESSGCTPDRKARQIL 503
M S +P+ IL
Sbjct: 196 MLESQVSPNVFTYNIL 211
>sp|Q9LYZ9|PP362_ARATH Pentatricopeptide repeat-containing protein At5g02860
OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1
Length = 819
Score = 183 bits (464), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 192/408 (47%), Gaps = 34/408 (8%)
Query: 89 KLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKLR 148
K G + A + +Q GF SY SLI A A+ GR EA +F++M G P L
Sbjct: 185 KEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLI 244
Query: 149 FYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINEM 208
YN++L F K MG N+ T ++ +M
Sbjct: 245 TYNVILNVFGK----------------MGTPWNKITS------------------LVEKM 270
Query: 209 RSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGEL 268
+S G +++ Y +I + + ++A + EE++ G S D+ YN+++D +GK
Sbjct: 271 KSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRP 330
Query: 269 VEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITI 328
EA++V +M P IVT+NSLI + + G + +A+EL QM E+G PD + T+
Sbjct: 331 KEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTL 390
Query: 329 ISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGL 388
+S GK + FE M++ G + + +YG G+F + + + + GL
Sbjct: 391 LSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGL 450
Query: 389 QPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALS 448
P + L + Q G+ + V + M+ G P N LI+A+ G +++A++
Sbjct: 451 SPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMT 510
Query: 449 VYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPD 496
VY M D G++PDL TY+T++ A R + + ++ +ME C P+
Sbjct: 511 VYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPN 558
Score = 171 bits (433), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/454 (24%), Positives = 208/454 (45%), Gaps = 37/454 (8%)
Query: 79 SYNKSIQYCCKLGDI-DEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQE 137
+YN I CCK G + EA + +M+A GF ++Y +L++ R EA + E
Sbjct: 281 TYNTLIT-CCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNE 339
Query: 138 MVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGR 197
MV GF+P + YN L+ + + G+L L M + G + TY LL AG+
Sbjct: 340 MVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGK 399
Query: 198 LDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNS 257
++ I EMR+ G + N + I +Y + G + + + I +EI GLS D +N+
Sbjct: 400 VESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNT 459
Query: 258 IIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQG 317
++ FG+ G E VF++M++ P+ T+N+LI + + G +A+ ++ +M + G
Sbjct: 460 LLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAG 519
Query: 318 FYPDPKIFITIISCLGELGKWDVIKKNFENMKD----------------RGHGK-IGAIY 360
PD + T+++ L G W+ +K M+D +GK IG ++
Sbjct: 520 VTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMH 579
Query: 361 AILVDIYGQYGRFR------------------DPEECIAALKLEGLQPSGSMFCILANAY 402
++ ++Y R + E + LK G P + + + Y
Sbjct: 580 SLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIY 639
Query: 403 AQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDL 462
++ + + VL M+ G P++ N L+ + + ++ + + GI PD+
Sbjct: 640 GRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDI 699
Query: 463 VTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPD 496
++Y+T++ A+ R + I+ +M +SG PD
Sbjct: 700 ISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPD 733
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/464 (21%), Positives = 208/464 (44%), Gaps = 35/464 (7%)
Query: 71 SGEEFSGNSYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLE 130
+G + +YN + K EAM +L +M GF PS ++Y SLI A A G E
Sbjct: 308 AGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDE 367
Query: 131 ADAIFQEMVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLD 190
A + +M G P + Y LL GF + G + + M + G N T+ +
Sbjct: 368 AMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIK 427
Query: 191 YHVNAGRLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSL 250
+ N G+ + I +E+ G + + ++ ++ NGM + G+ +E++ G
Sbjct: 428 MYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVP 487
Query: 251 DRQIYNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELF 310
+R+ +N++I + + G +A+ V+ +M + PD+ T+N+++ + G ++ ++
Sbjct: 488 ERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVL 547
Query: 311 TQMQEQGFYPDPKIFITIISCLG---ELG-----------------------------KW 338
+M++ P+ + +++ E+G K
Sbjct: 548 AEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKC 607
Query: 339 DVI---KKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMF 395
D++ ++ F +K+RG +V IYG+ + +K G PS + +
Sbjct: 608 DLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATY 667
Query: 396 CILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKD 455
L +++ ++ ++L+ + +GI+P+++ N +I A+ + ++A ++ M++
Sbjct: 668 NSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRN 727
Query: 456 IGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKA 499
GI PD++TY+T + ++ F + + + M GC P++
Sbjct: 728 SGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNT 771
Score = 139 bits (350), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 148/292 (50%), Gaps = 3/292 (1%)
Query: 208 MRSKGFQ--LNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKY 265
M+ K +Q L++ V +I + G A + ++E G SLD Y S+I F
Sbjct: 162 MKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANS 221
Query: 266 GELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDV-AKALELFTQMQEQGFYPDPKI 324
G EA+ VF+KM+++ +P ++T+N ++ K G K L +M+ G PD
Sbjct: 222 GRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYT 281
Query: 325 FITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALK 384
+ T+I+C + FE MK G Y L+D+YG+ R ++ + + +
Sbjct: 282 YNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMV 341
Query: 385 LEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYK 444
L G PS + L +AYA+ G+ ++ +++ M +G +P++ L++ F AGK +
Sbjct: 342 LNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVE 401
Query: 445 EALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPD 496
A+S++ M++ G P++ T++ +K + KF ++ +I+ ++ G +PD
Sbjct: 402 SAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPD 453
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 170/364 (46%), Gaps = 14/364 (3%)
Query: 154 LRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNA---------GRLDDTWLI 204
L FLK LG + + + Q+ Y+ +LD V A GR+ +
Sbjct: 138 LLAFLKG--LGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANM 195
Query: 205 INEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGK 264
N ++ GF L+ + Y +I + ++G +++AV + +++ E G YN I++ FGK
Sbjct: 196 FNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGK 255
Query: 265 YGELVEAL-EVFEKMQQESIRPDIVTWNSLIRWHCKAGDV-AKALELFTQMQEQGFYPDP 322
G + + EKM+ + I PD T+N+LI CK G + +A ++F +M+ GF D
Sbjct: 256 MGTPWNKITSLVEKMKSDGIAPDAYTYNTLITC-CKRGSLHQEAAQVFEEMKAAGFSYDK 314
Query: 323 KIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAA 382
+ ++ G+ + K M G Y L+ Y + G + E
Sbjct: 315 VTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQ 374
Query: 383 LKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGK 442
+ +G +P + L + + + G E + + + M G +PN+ N I +G GK
Sbjct: 375 MAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGK 434
Query: 443 YKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQI 502
+ E + ++ + G+SPD+VT++TL+ F + +V ++K+M+ +G P+R+
Sbjct: 435 FTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNT 494
Query: 503 LQSA 506
L SA
Sbjct: 495 LISA 498
Score = 135 bits (341), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 110/453 (24%), Positives = 194/453 (42%), Gaps = 36/453 (7%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISY-----------------ASLIEA 121
SY I G EA+ + +M+ G P+ I+Y SL+E
Sbjct: 210 SYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEK 269
Query: 122 LASVG--------RTL-----------EADAIFQEMVCFGFNPKLRFYNILLRGFLKKGL 162
+ S G TL EA +F+EM GF+ YN LL + K
Sbjct: 270 MKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHR 329
Query: 163 LGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINEMRSKGFQLNSFVYGK 222
++L M G + TY L+ + G LD+ + N+M KG + + F Y
Sbjct: 330 PKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTT 389
Query: 223 VIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQES 282
++ + G + A+ I EE+R G + +N+ I +G G+ E +++F+++
Sbjct: 390 LLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCG 449
Query: 283 IRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIK 342
+ PDIVTWN+L+ + G ++ +F +M+ GF P+ + F T+IS G ++
Sbjct: 450 LSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAM 509
Query: 343 KNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFCILANAY 402
+ M D G + Y ++ + G + E+ +A ++ +P+ +C L +AY
Sbjct: 510 TVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAY 569
Query: 403 AQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDL 462
A + + + IEP V+L L+ EA + +K+ G SPD+
Sbjct: 570 ANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDI 629
Query: 463 VTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTP 495
T ++++ + R + K + M+ G TP
Sbjct: 630 TTLNSMVSIYGRRQMVAKANGVLDYMKERGFTP 662
Score = 123 bits (308), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/391 (21%), Positives = 173/391 (44%), Gaps = 4/391 (1%)
Query: 89 KLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKLR 148
+ G ++ AM++ +M+ G P+ ++ + I+ + G+ E IF E+ G +P +
Sbjct: 396 RAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIV 455
Query: 149 FYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINEM 208
+N LL F + G+ S + M+ G +ET+ L+ + G + + M
Sbjct: 456 TWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRM 515
Query: 209 RSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGEL 268
G + Y V+ GMW+++ ++ E+ + + Y S++ + E+
Sbjct: 516 LDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEI 575
Query: 269 VEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITI 328
+ E++ I P V +L+ K + +A F++++E+GF PD ++
Sbjct: 576 GLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSM 635
Query: 329 ISCLGELGKWDVIKKN--FENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLE 386
+S G + V K N + MK+RG A Y L+ ++ + F EE + + +
Sbjct: 636 VSIYGR--RQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAK 693
Query: 387 GLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEA 446
G++P + + AY + ++ M GI P+++ N I ++ ++EA
Sbjct: 694 GIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEA 753
Query: 447 LSVYHLMKDIGISPDLVTYSTLMKAFIRAKK 477
+ V M G P+ TY++++ + + +
Sbjct: 754 IGVVRYMIKHGCRPNQNTYNSIVDGYCKLNR 784
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 116/248 (46%), Gaps = 4/248 (1%)
Query: 252 RQIYNSIIDTFGKYGELVEAL-EVFE--KMQQESIRPDIVTWNSLIRWHCKAGDVAKALE 308
+Q+ S+I+ G+L L E+FE K + ES +++ + + +H K +A +
Sbjct: 100 QQVLRSLIEPNFDSGQLDSVLSELFEPFKDKPESTSSELLAFLKGLGFHKKFDLALRAFD 159
Query: 309 LFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYG 368
F + ++ D + IIS LG+ G+ F +++ G Y L+ +
Sbjct: 160 WFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFA 219
Query: 369 QYGRFRDPEECIAALKLEGLQPSGSMFCILANAYAQQGL-CEQTVKVLQLMEPEGIEPNL 427
GR+R+ ++ +G +P+ + ++ N + + G + +++ M+ +GI P+
Sbjct: 220 NSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDA 279
Query: 428 VMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQ 487
N LI ++EA V+ MK G S D VTY+ L+ + ++ + + ++ +
Sbjct: 280 YTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNE 339
Query: 488 MESSGCTP 495
M +G +P
Sbjct: 340 MVLNGFSP 347
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 85/194 (43%)
Query: 87 CCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPK 146
C K + EA ++++ GF P + S++ +A+ + M GF P
Sbjct: 604 CSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPS 663
Query: 147 LRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIIN 206
+ YN L+ + G +L + GI + +Y ++ + R+ D I +
Sbjct: 664 MATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFS 723
Query: 207 EMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYG 266
EMR+ G + Y IG Y + M+++A+G+V + + G ++ YNSI+D + K
Sbjct: 724 EMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLN 783
Query: 267 ELVEALEVFEKMQQ 280
EA E ++
Sbjct: 784 RKDEAKLFVEDLRN 797
Score = 68.9 bits (167), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/273 (19%), Positives = 124/273 (45%)
Query: 78 NSYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQE 137
++YN + + G +++ +LA+M+ P+ ++Y SL+ A A+ ++ +E
Sbjct: 525 STYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEE 584
Query: 138 MVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGR 197
+ P+ L+ K LL R +++ G + T ++ +
Sbjct: 585 VYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQM 644
Query: 198 LDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNS 257
+ +++ M+ +GF + Y ++ ++ + + K+ I+ EI G+ D YN+
Sbjct: 645 VAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNT 704
Query: 258 IIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQG 317
+I + + + +A +F +M+ I PD++T+N+ I + +A+ + M + G
Sbjct: 705 VIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHG 764
Query: 318 FYPDPKIFITIISCLGELGKWDVIKKNFENMKD 350
P+ + +I+ +L + D K E++++
Sbjct: 765 CRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRN 797
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 178 bits (451), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 112/419 (26%), Positives = 197/419 (47%)
Query: 88 CKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKL 147
C G + EA+AL+ +M + P ++ ++LI L GR EA + MV +GF P
Sbjct: 151 CLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDE 210
Query: 148 RFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINE 207
Y +L K G L L ME+ I + Y I++D G DD + NE
Sbjct: 211 VTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNE 270
Query: 208 MRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGE 267
M KG + + Y +IG ++G W ++ E+ + D ++++ID F K G+
Sbjct: 271 MEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGK 330
Query: 268 LVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFIT 327
L+EA E++ +M I PD +T+NSLI CK + +A ++F M +G PD +
Sbjct: 331 LLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSI 390
Query: 328 IISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEG 387
+I+ + + D + F + +G Y LV + Q G+ +E + G
Sbjct: 391 LINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRG 450
Query: 388 LQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEAL 447
+ PS + IL + G + +++ + M+ + + + N++I+ A K +A
Sbjct: 451 VPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAW 510
Query: 448 SVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQILQSA 506
S++ + D G+ PD+VTY+ ++ + + ++++M+ GCTPD IL A
Sbjct: 511 SLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRA 569
Score = 132 bits (333), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 92/399 (23%), Positives = 171/399 (42%), Gaps = 35/399 (8%)
Query: 96 AMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKLRFYNILLR 155
A ++L + LG+ P +I++++L+ GR EA A+ MV P L + L+
Sbjct: 124 AFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLIN 183
Query: 156 GFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINEMRSKGFQL 215
G KG R+ + ++I+ M GFQ
Sbjct: 184 GLCLKG-----------------------------------RVSEALVLIDRMVEYGFQP 208
Query: 216 NSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGELVEALEVF 275
+ YG V+ +G A+ + ++ E + Y+ +ID+ K G +AL +F
Sbjct: 209 DEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLF 268
Query: 276 EKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGEL 335
+M+ + I+ D+VT++SLI C G ++ +M + PD F +I +
Sbjct: 269 NEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKE 328
Query: 336 GKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMF 395
GK K+ + M RG Y L+D + + + + + +G +P +
Sbjct: 329 GKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTY 388
Query: 396 CILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKD 455
IL N+Y + + +++ + + +G+ PN + N L+ F +GK A ++ M
Sbjct: 389 SILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVS 448
Query: 456 IGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCT 494
G+ P +VTY L+ + +K EI+++M+ S T
Sbjct: 449 RGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMT 487
Score = 129 bits (324), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/418 (22%), Positives = 190/418 (45%), Gaps = 6/418 (1%)
Query: 93 IDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIF---QEMVCFGFNPKLRF 149
+++A+ L M P+ I + L A+A RT + D + + M G +
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVA---RTKQYDLVLGFCKGMELNGIEHDMYT 107
Query: 150 YNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINEMR 209
I++ + +K L +L +G + T+ L++ GR+ + +++ M
Sbjct: 108 MTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMV 167
Query: 210 SKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGELV 269
+ + +I G +A+ +++ + E G D Y +++ K G
Sbjct: 168 EMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSA 227
Query: 270 EALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITII 329
AL++F KM++ +I+ +V ++ +I CK G AL LF +M+ +G D + ++I
Sbjct: 228 LALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLI 287
Query: 330 SCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQ 389
L GKWD K M R ++ L+D++ + G+ + +E + G+
Sbjct: 288 GGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIA 347
Query: 390 PSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSV 449
P + L + + ++ + ++ LM +G EP++V ++LIN++ A + + + +
Sbjct: 348 PDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRL 407
Query: 450 YHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQILQSAL 507
+ + G+ P+ +TY+TL+ F ++ K + E++++M S G P IL L
Sbjct: 408 FREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGL 465
Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 147/329 (44%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+Y+ I C G D+ +L +M P +++++LI+ G+ LEA ++ EM
Sbjct: 282 TYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEM 341
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
+ G P YN L+ GF K+ L +++ +M G + TY IL++ + A R+
Sbjct: 342 ITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRV 401
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSI 258
DD + E+ SKG N+ Y ++ + +G A + +E+ G+ Y +
Sbjct: 402 DDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGIL 461
Query: 259 IDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGF 318
+D GEL +ALE+FEKMQ+ + I +N +I C A V A LF + ++G
Sbjct: 462 LDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGV 521
Query: 319 YPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEE 378
PD + +I L + G F MK+ G Y IL+ + E
Sbjct: 522 KPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVE 581
Query: 379 CIAALKLEGLQPSGSMFCILANAYAQQGL 407
I +K+ G S ++ + + + L
Sbjct: 582 LIEEMKVCGFSADSSTIKMVIDMLSDRRL 610
Score = 109 bits (272), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 161/356 (45%)
Query: 80 YNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMV 139
Y+ I CK G D+A++L +M+ G ++Y+SLI L + G+ + + +EM+
Sbjct: 248 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 307
Query: 140 CFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLD 199
P + ++ L+ F+K+G L L M GI + TY L+D L
Sbjct: 308 GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH 367
Query: 200 DTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSII 259
+ + + M SKG + + Y +I Y + + EI GL + YN+++
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 427
Query: 260 DTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFY 319
F + G+L A E+F++M + P +VT+ L+ C G++ KALE+F +MQ+
Sbjct: 428 LGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMT 487
Query: 320 PDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEEC 379
I+ II + K D F ++ D+G Y +++ + G + +
Sbjct: 488 LGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADML 547
Query: 380 IAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLIN 435
+K +G P + IL A+ +V++++ M+ G + + ++I+
Sbjct: 548 FRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVID 603
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 176 bits (447), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 110/414 (26%), Positives = 202/414 (48%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
SY I K GD D+A + +M G P ++Y S+I AL +A + M
Sbjct: 198 SYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTM 257
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
V G P YN +L G+ G L M G+ + TY +L+DY GR
Sbjct: 258 VKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRC 317
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSI 258
+ I + M +G + YG ++ Y G + G+++ + G+ D +++ +
Sbjct: 318 MEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSIL 377
Query: 259 IDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGF 318
I + K G++ +A+ VF KM+Q+ + P+ VT+ ++I CK+G V A+ F QM ++G
Sbjct: 378 ICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGL 437
Query: 319 YPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEE 378
P ++ ++I L KW+ ++ M DRG + ++D + + GR + E+
Sbjct: 438 SPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEK 497
Query: 379 CIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFG 438
+ G++P+ + L N Y G ++ +K+L M G++PN V + LIN +
Sbjct: 498 LFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYC 557
Query: 439 VAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSG 492
+ ++AL ++ M+ G+SPD++TY+ +++ + ++ E+Y ++ SG
Sbjct: 558 KISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESG 611
Score = 168 bits (426), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 124/510 (24%), Positives = 214/510 (41%), Gaps = 76/510 (14%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEA-DAIFQE 137
+Y I CC+ G +D A L + GF +I++ L++ L + RT +A D + +
Sbjct: 89 TYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRR 148
Query: 138 MVCFGFNPKLRFYNILLR--------------------------------------GFLK 159
M G P + YNILL+ GF K
Sbjct: 149 MTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFK 208
Query: 160 KGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINEMRSKGFQLNSFV 219
+G M D GI + TY ++ A +D ++N M G +
Sbjct: 209 EGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT 268
Query: 220 YGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGELVEALEVFEKMQ 279
Y ++ Y +G K+A+G ++++R G+ D Y+ ++D K G +EA ++F+ M
Sbjct: 269 YNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMT 328
Query: 280 QESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWD 339
+ ++P+I T+ +L++ + G + + L M G +PD +F +I + GK D
Sbjct: 329 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVD 388
Query: 340 VIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFCILA 399
F M+ +G Y ++ I + GR D + EGL P ++ L
Sbjct: 389 QAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLI 448
Query: 400 NAYA----------------QQGLCEQTV-------------------KVLQLMEPEGIE 424
+ +G+C T+ K+ +LM G++
Sbjct: 449 HGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVK 508
Query: 425 PNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEI 484
PN++ N LIN + +AGK EA+ + M +G+ P+ VTYSTL+ + + + +
Sbjct: 509 PNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVL 568
Query: 485 YKQMESSGCTPDRKARQILQSALVVLEQRR 514
+K+MESSG +PD I+ L + RR
Sbjct: 569 FKEMESSGVSPDIITYNIILQGL--FQTRR 596
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 114/466 (24%), Positives = 216/466 (46%), Gaps = 40/466 (8%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+YN + C G EA+ L +M++ G P ++Y+ L++ L GR +EA IF M
Sbjct: 268 TYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSM 327
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
G P++ Y LL+G+ KG L LL +M GI + + IL+ + G++
Sbjct: 328 TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKV 387
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGM-------------------------- 232
D L+ ++MR +G N+ YG VIG+ +G
Sbjct: 388 DQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSL 447
Query: 233 ---------WKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQESI 283
W++A ++ E+ + G+ L+ +NSIID+ K G ++E+ ++FE M + +
Sbjct: 448 IHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGV 507
Query: 284 RPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKK 343
+P+++T+N+LI +C AG + +A++L + M G P+ + T+I+ ++ + +
Sbjct: 508 KPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALV 567
Query: 344 NFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFCILANAYA 403
F+ M+ G Y I++ Q R +E + G Q S + I+ +
Sbjct: 568 LFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLC 627
Query: 404 QQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLV 463
+ L + +++ Q + ++ N++I+A G+ EA ++ G+ P+
Sbjct: 628 KNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYW 687
Query: 464 TYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRK-----ARQILQ 504
TY + + I ++ +++ ME +GCT D R++LQ
Sbjct: 688 TYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQ 733
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 130/306 (42%), Gaps = 43/306 (14%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+YN I C G +DEAM LL+ M ++G P++++Y++LI + R +A +F+EM
Sbjct: 513 TYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEM 572
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
G +P + YNI+L+G + L + + + G TY I+L
Sbjct: 573 ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILH-------- 624
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSI 258
GL + N + A+ + + + M L L+ + +N +
Sbjct: 625 --------------------------GLCK-NKLTDDALQMFQNLCLMDLKLEARTFNIM 657
Query: 259 IDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGF 318
ID K G EA ++F + P+ T+ + G + + +LF M++ G
Sbjct: 658 IDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGC 717
Query: 319 YPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYA-ILVDI-----YGQYGR 372
D + I+ L + G+ + +M D H + A A + +D+ Y +Y R
Sbjct: 718 TVDSGMLNFIVRELLQRGEI-TRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKYQEYYR 776
Query: 373 FRDPEE 378
F PE+
Sbjct: 777 FL-PEK 781
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 95/231 (41%), Gaps = 4/231 (1%)
Query: 281 ESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCL-GELGKWD 339
+ + PD+ T+ LI C+AG + + ++GF D F ++ L + D
Sbjct: 81 DEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSD 140
Query: 340 VIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLE---GLQPSGSMFC 396
+ M + G Y IL+ R ++ E + + + G P +
Sbjct: 141 AMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYT 200
Query: 397 ILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDI 456
+ N + ++G ++ M GI P++V N +I A A +A+ V + M
Sbjct: 201 TVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKN 260
Query: 457 GISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQILQSAL 507
G+ PD +TY++++ + + + + K+M S G PD +L L
Sbjct: 261 GVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYL 311
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 50/109 (45%)
Query: 69 SNSGEEFSGNSYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRT 128
+ SG + ++YN + CK D+A+ + + + + ++ +I+AL VGR
Sbjct: 608 TESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRN 667
Query: 129 LEADAIFQEMVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMG 177
EA +F G P Y ++ + +GLL +L + MED G
Sbjct: 668 DEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNG 716
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 176 bits (447), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 201/419 (47%)
Query: 88 CKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKL 147
C I EA+AL+ QM +G+ P ++++ +L+ L + EA A+ + MV G P L
Sbjct: 146 CHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDL 205
Query: 148 RFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINE 207
Y ++ G K+G L LL ME I + Y ++D +DD + E
Sbjct: 206 VTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTE 265
Query: 208 MRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGE 267
M +KG + + F Y +I + G W A ++ ++ E ++ + +NS+ID F K G+
Sbjct: 266 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGK 325
Query: 268 LVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFIT 327
L+EA ++F++M Q SI P+IVT+NSLI C + +A ++FT M + PD + T
Sbjct: 326 LIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNT 385
Query: 328 IISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEG 387
+I+ + K + F +M RG Y L+ + Q + + + +G
Sbjct: 386 LINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDG 445
Query: 388 LQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEAL 447
+ P+ + L + + G E+ + V + ++ +EP++ N++ AGK ++
Sbjct: 446 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGW 505
Query: 448 SVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQILQSA 506
++ + G+ PD++ Y+T++ F + + ++ +M+ G PD L A
Sbjct: 506 DLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRA 564
Score = 160 bits (404), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 110/437 (25%), Positives = 204/437 (46%), Gaps = 6/437 (1%)
Query: 65 SPDGSNSGEEFSGNSYNKSIQYCCKLG----DIDEAMALLAQMQALGFHPSSISYASLIE 120
SP G FSG SY+ + + +DEA+ L +M PS + ++ L+
Sbjct: 14 SPSFCLRGIYFSGLSYDGYREKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLS 73
Query: 121 ALASVGRTLEADAIFQEMVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICR 180
A+A + + + ++M G + L YNI++ ++ L +L M +G
Sbjct: 74 AIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGP 133
Query: 181 NQETYEILLDYHVNAGRLDDTWLIINEMRSKGFQLNSFVYGKVI-GLYRDNGMWKKAVGI 239
+ T LL+ + R+ + ++++M G+Q ++ + ++ GL++ N +AV +
Sbjct: 134 SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNK-ASEAVAL 192
Query: 240 VEEIREMGLSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCK 299
VE + G D Y ++I+ K GE AL + KM++ I D+V ++++I CK
Sbjct: 193 VERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCK 252
Query: 300 AGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAI 359
V AL LFT+M +G PD + ++ISCL G+W + +M +R
Sbjct: 253 YRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVT 312
Query: 360 YAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLME 419
+ L+D + + G+ + E+ + + P+ + L N + ++ ++ LM
Sbjct: 313 FNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMV 372
Query: 420 PEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFH 479
+ P++V N LIN F A K + + ++ M G+ + VTY+TL+ F +A
Sbjct: 373 SKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCD 432
Query: 480 KVPEIYKQMESSGCTPD 496
++KQM S G P+
Sbjct: 433 NAQMVFKQMVSDGVHPN 449
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/434 (23%), Positives = 185/434 (42%), Gaps = 45/434 (10%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+YN I C+ + A+A+L +M LG+ PS ++ SL+ R EA A+ +M
Sbjct: 102 TYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 161
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
V G+ P + L+ G + N+ + + L
Sbjct: 162 VEMGYQPDTVTFTTLVHGLFQ--------------------HNKASEAVAL--------- 192
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKK-----AVGIVEEIREMGLSLDRQ 253
+ M KG Q + YG VI NG+ K+ A+ ++ ++ + + D
Sbjct: 193 ------VERMVVKGCQPDLVTYGAVI-----NGLCKRGEPDLALNLLNKMEKGKIEADVV 241
Query: 254 IYNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQM 313
IY+++ID+ KY + +AL +F +M + IRPD+ T++SLI C G + A L + M
Sbjct: 242 IYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 301
Query: 314 QEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRF 373
E+ P+ F ++I + GK +K F+ M R Y L++ + + R
Sbjct: 302 LERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL 361
Query: 374 RDPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVL 433
+ ++ + + P + L N + + +++ + M G+ N V L
Sbjct: 362 DEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTL 421
Query: 434 INAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGC 493
I+ F A A V+ M G+ P+++TY+TL+ + K K +++ ++ S
Sbjct: 422 IHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKM 481
Query: 494 TPDRKARQILQSAL 507
PD I+ +
Sbjct: 482 EPDIYTYNIMSEGM 495
Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 134/286 (46%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+Y+ I C G +A LL+ M +P+ +++ SLI+A A G+ +EA+ +F EM
Sbjct: 277 TYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM 336
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
+ +P + YN L+ GF L ++ +M + TY L++ A ++
Sbjct: 337 IQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKV 396
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSI 258
D + +M +G N+ Y +I + A + +++ G+ + YN++
Sbjct: 397 VDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTL 456
Query: 259 IDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGF 318
+D K G+L +A+ VFE +Q+ + PDI T+N + CKAG V +LF + +G
Sbjct: 457 LDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGV 516
Query: 319 YPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILV 364
PD + T+IS + G + F MK+ G Y L+
Sbjct: 517 KPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLI 562
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 120/296 (40%), Gaps = 36/296 (12%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
++N I K G + EA L +M P+ ++Y SLI R EA IF M
Sbjct: 312 TFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLM 371
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
V P + YN L+ GF K + G L M G+ N TY L+ A
Sbjct: 372 VSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDC 431
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIRE------------- 245
D+ ++ +M S G N Y ++ NG +KA+ + E +++
Sbjct: 432 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIM 491
Query: 246 ----------------------MGLSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQESI 283
G+ D YN++I F K G EA +F KM+++
Sbjct: 492 SEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGP 551
Query: 284 RPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWD 339
PD T+N+LIR H + GD A + EL +M+ F D + + L + G+ D
Sbjct: 552 LPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHD-GRLD 606
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 71/156 (45%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+YN + CK G +++AM + +Q P +Y + E + G+ + +F +
Sbjct: 452 TYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSL 511
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
G P + YN ++ GF KKGL L + M++ G + TY L+ H+ G
Sbjct: 512 SLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDK 571
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWK 234
+ +I EMRS F ++ YG V + D + K
Sbjct: 572 AASAELIKEMRSCRFAGDASTYGLVTDMLHDGRLDK 607
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 175 bits (444), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 118/452 (26%), Positives = 214/452 (47%), Gaps = 14/452 (3%)
Query: 73 EEFSGNSYNKSIQYCCKLGDI--DEAMALLAQMQALGFHPSSISYASLIEALASVGRTLE 130
+FSG Y+ +L D+ D+A+ L M PS + ++ L+ A+A + +
Sbjct: 40 RDFSGVRYDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDL 99
Query: 131 ADAIFQEMVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLD 190
++ ++M G + L Y+IL+ F ++ L L +L M +G + T LL+
Sbjct: 100 VISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLN 159
Query: 191 YHVNAGRLDDTWLIINEMRSKGFQLNSFVYGKVI-GLYRDNGMWKKAVGIVEEIREMGLS 249
+ R+ D ++ +M G+Q +SF + +I GL+R N +AV +V+ + G
Sbjct: 160 GFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHN-RASEAVALVDRMVVKGCQ 218
Query: 250 LDRQIYNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALEL 309
D Y +++ K G++ AL + +KM+Q I P +V +N++I C +V AL L
Sbjct: 219 PDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNL 278
Query: 310 FTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQ 369
FT+M +G P+ + ++I CL G+W + +M +R ++ L+D + +
Sbjct: 279 FTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 338
Query: 370 YGRFRDPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVM 429
G+ + E+ + + P + L N + ++ + +LM + PN+V
Sbjct: 339 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 398
Query: 430 LNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQME 489
N LI F A + E + ++ M G+ + VTY+TL+ F +A++ ++KQM
Sbjct: 399 YNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMV 458
Query: 490 SSGCTPDRKARQIL----------QSALVVLE 511
S G PD IL ++ALVV E
Sbjct: 459 SDGVLPDIMTYSILLDGLCNNGKVETALVVFE 490
Score = 175 bits (444), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 110/419 (26%), Positives = 198/419 (47%)
Query: 88 CKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKL 147
C I +A++L+ QM +G+ P S ++ +LI L R EA A+ MV G P L
Sbjct: 162 CHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDL 221
Query: 148 RFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINE 207
Y I++ G K+G + L LL ME I Y ++D N ++D + E
Sbjct: 222 VTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTE 281
Query: 208 MRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGE 267
M +KG + N Y +I + G W A ++ ++ E ++ + ++++ID F K G+
Sbjct: 282 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 341
Query: 268 LVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFIT 327
LVEA +++++M + SI PDI T++SLI C + +A +F M + +P+ + T
Sbjct: 342 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 401
Query: 328 IISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEG 387
+I + + D + F M RG Y L+ + Q + + + +G
Sbjct: 402 LIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDG 461
Query: 388 LQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEAL 447
+ P + IL + G E + V + ++ +EP++ N++I AGK ++
Sbjct: 462 VLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGW 521
Query: 448 SVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQILQSA 506
++ + G+ P++VTY+T+M F R + ++++M+ G PD L A
Sbjct: 522 DLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRA 580
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 129/289 (44%), Gaps = 41/289 (14%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+YN I+ C G +A LL+ M +P+ +++++LI+A G+ +EA+ ++ EM
Sbjct: 293 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 139 V--------------------------------------CFGFNPKLRFYNILLRGFLKK 160
+ CF P + YN L++GF K
Sbjct: 353 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF---PNVVTYNTLIKGFCKA 409
Query: 161 GLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINEMRSKGFQLNSFVY 220
+ G L M G+ N TY L+ A D+ ++ +M S G + Y
Sbjct: 410 KRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTY 469
Query: 221 GKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQ 280
++ +NG + A+ + E ++ + D YN +I+ K G++ + ++F +
Sbjct: 470 SILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 529
Query: 281 ESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITII 329
+ ++P++VT+ +++ C+ G +A LF +M+E+G PD + T+I
Sbjct: 530 KGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLI 578
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 67/156 (42%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+Y+ + C G ++ A+ + +Q P +Y +IE + G+ + +F +
Sbjct: 468 TYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL 527
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
G P + Y ++ GF +KGL L M++ G + TY L+ H+ G
Sbjct: 528 SLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDK 587
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWK 234
+ +I EMRS F ++ G V + D + K
Sbjct: 588 AASAELIREMRSCRFVGDASTIGLVTNMLHDGRLDK 623
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/189 (20%), Positives = 77/189 (40%), Gaps = 35/189 (18%)
Query: 92 DIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKLRFYN 151
+ D A + QM + G P ++Y+ L++ L + G+ A +F+ + P + YN
Sbjct: 446 ECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYN 505
Query: 152 ILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINEMRSK 211
I++ G K AG+++D W + + K
Sbjct: 506 IMIEGMCK-----------------------------------AGKVEDGWDLFCSLSLK 530
Query: 212 GFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGELVEA 271
G + N Y ++ + G+ ++A + E++E G D YN++I + G+ +
Sbjct: 531 GVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAAS 590
Query: 272 LEVFEKMQQ 280
E+ +M+
Sbjct: 591 AELIREMRS 599
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 118/444 (26%), Positives = 209/444 (47%), Gaps = 35/444 (7%)
Query: 88 CKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKL 147
C I EA+AL+ QM + + P+++++ +LI L + EA A+ MV G P L
Sbjct: 161 CHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDL 220
Query: 148 RFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINE 207
Y ++ G K+G + L LL ME I + Y ++D N ++D + E
Sbjct: 221 FTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTE 280
Query: 208 MRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGE 267
M +KG + N Y +I + G W A ++ ++ E ++ + ++++ID F K G+
Sbjct: 281 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 340
Query: 268 LVEALEVFEKMQQESIRPDI-----------------------------------VTWNS 292
LVEA +++++M + SI PDI VT+N+
Sbjct: 341 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 400
Query: 293 LIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRG 352
LI+ CKA V + +ELF +M ++G + + T+I L + G D+ +K F+ M G
Sbjct: 401 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460
Query: 353 HGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTV 412
Y+IL+D +YG+ L+ ++P + I+ + G E
Sbjct: 461 VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGW 520
Query: 413 KVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAF 472
+ + +G++PN+++ +I+ F G +EA +++ MK+ G P+ TY+TL++A
Sbjct: 521 DLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRAR 580
Query: 473 IRAKKFHKVPEIYKQMESSGCTPD 496
+R E+ K+M S G D
Sbjct: 581 LRDGDKAASAELIKEMRSCGFVGD 604
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 121/493 (24%), Positives = 221/493 (44%), Gaps = 29/493 (5%)
Query: 44 MRRCVKEGYAYSLGNK--------NLSIKSPDGSNSGEEFSGNSYN------KSIQYCCK 89
M CV G S K L SP S G FS SY+ +++ K
Sbjct: 1 MTSCVHLGIVASQSKKMSLAKRFAQLRKASPLFSLRGVYFSAASYDYREKLSRNVLLDLK 60
Query: 90 LGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKLRF 149
L D+A+ L +M PS + + L+ A+A + + ++ + M + L
Sbjct: 61 L---DDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYS 117
Query: 150 YNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINEMR 209
YNIL+ F ++ L L +L M +G + T LL+ + + R+ + ++++M
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 177
Query: 210 SKGFQLNSFVYGKVI-GLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGEL 268
+Q N+ + +I GL+ N +AV +++ + G D Y ++++ K G++
Sbjct: 178 VMEYQPNTVTFNTLIHGLFLHNK-ASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDI 236
Query: 269 VEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITI 328
AL + +KM++ I D+V + ++I C +V AL LFT+M +G P+ + ++
Sbjct: 237 DLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 296
Query: 329 ISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGL 388
I CL G+W + +M +R ++ L+D + + G+ + E+ + +
Sbjct: 297 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 356
Query: 389 QPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALS 448
P + L N + ++ + +LM + PN+V N LI F A + +E +
Sbjct: 357 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME 416
Query: 449 VYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQI------ 502
++ M G+ + VTY+TL++ +A +I+K+M S G PD I
Sbjct: 417 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLC 476
Query: 503 ----LQSALVVLE 511
L+ ALVV E
Sbjct: 477 KYGKLEKALVVFE 489
Score = 139 bits (349), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 101/423 (23%), Positives = 182/423 (43%), Gaps = 45/423 (10%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
SYN I C+ + A+A+L +M LG+ P ++ +SL+ R EA A+ +M
Sbjct: 117 SYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM 176
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
+ P +N L+ G H A
Sbjct: 177 FVMEYQPNTVTFNTLIHGLF--------------------------------LHNKAS-- 202
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKK-----AVGIVEEIREMGLSLDRQ 253
+ +I+ M ++G Q + F YG V+ NG+ K+ A+ +++++ + + D
Sbjct: 203 -EAVALIDRMVARGCQPDLFTYGTVV-----NGLCKRGDIDLALSLLKKMEKGKIEADVV 256
Query: 254 IYNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQM 313
IY +IID Y + +AL +F +M + IRP++VT+NSLIR C G + A L + M
Sbjct: 257 IYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 316
Query: 314 QEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRF 373
E+ P+ F +I + GK +K ++ M R Y+ L++ + + R
Sbjct: 317 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 376
Query: 374 RDPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVL 433
+ + + + P+ + L + + E+ +++ + M G+ N V N L
Sbjct: 377 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 436
Query: 434 INAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGC 493
I AG A ++ M G+ PD++TYS L+ + K K +++ ++ S
Sbjct: 437 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 496
Query: 494 TPD 496
PD
Sbjct: 497 EPD 499
Score = 125 bits (315), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 151/315 (47%), Gaps = 7/315 (2%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+YN I+ C G +A LL+ M +P+ +++++LI+A G+ +EA+ ++ EM
Sbjct: 292 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 351
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
+ +P + Y+ L+ GF L + +M N TY L+ A R+
Sbjct: 352 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 411
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVI-GLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNS 257
++ + EM +G N+ Y +I GL++ G A I +++ G+ D Y+
Sbjct: 412 EEGMELFREMSQRGLVGNTVTYNTLIQGLFQ-AGDCDMAQKIFKKMVSDGVPPDIITYSI 470
Query: 258 IIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQG 317
++D KYG+L +AL VFE +Q+ + PDI T+N +I CKAG V +LF + +G
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 530
Query: 318 FYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPE 377
P+ I+ T+IS G + F MK+ G Y L+ R RD +
Sbjct: 531 VKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI-----RARLRDGD 585
Query: 378 ECIAALKLEGLQPSG 392
+ +A ++ ++ G
Sbjct: 586 KAASAELIKEMRSCG 600
Score = 115 bits (289), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 172/390 (44%), Gaps = 35/390 (8%)
Query: 80 YNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMV 139
Y I C ++++A+ L +M G P+ ++Y SLI L + GR +A + +M+
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 317
Query: 140 CFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLD 199
NP + ++ L+ F+K+G L +L M I + TY L++ RLD
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377
Query: 200 DTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSII 259
+ + M SK N Y +I + ++ + + E+ + GL + YN++I
Sbjct: 378 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 437
Query: 260 DTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFY 319
+ G+ A ++F+KM + + PDI+T++ L+ CK G + KAL +F +Q+
Sbjct: 438 QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME 497
Query: 320 PDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEEC 379
PD I+ Y I+++ + G+ D +
Sbjct: 498 PD--IY---------------------------------TYNIMIEGMCKAGKVEDGWDL 522
Query: 380 IAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGV 439
+L L+G++P+ ++ + + + ++GL E+ + + M+ +G PN N LI A
Sbjct: 523 FCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLR 582
Query: 440 AGKYKEALSVYHLMKDIGISPDLVTYSTLM 469
G + + M+ G D T S ++
Sbjct: 583 DGDKAASAELIKEMRSCGFVGDASTISMVI 612
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 116/259 (44%), Gaps = 41/259 (15%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+YN I+ CK ++E M L +M G ++++Y +LI+ L G A IF++M
Sbjct: 397 TYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 456
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQE---TYEILLDYHVNA 195
V G P + Y+ILL G K G L + L+V E + + + TY I+++ A
Sbjct: 457 VSDGVPPDIITYSILLDGLCKYGKL---EKALVVFEYLQKSKMEPDIYTYNIMIEGMCKA 513
Query: 196 GRLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIY 255
G+++D W + + KG + N IY
Sbjct: 514 GKVEDGWDLFCSLSLKGVKPNVI-----------------------------------IY 538
Query: 256 NSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQE 315
++I F + G EA +F +M+++ P+ T+N+LIR + GD A + EL +M+
Sbjct: 539 TTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRS 598
Query: 316 QGFYPDPKIFITIISCLGE 334
GF D +I+ L +
Sbjct: 599 CGFVGDASTISMVINMLHD 617
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 65/147 (44%)
Query: 88 CKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKL 147
CK G +++A+ + +Q P +Y +IE + G+ + +F + G P +
Sbjct: 476 CKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 535
Query: 148 RFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINE 207
Y ++ GF +KGL L M++ G N TY L+ + G + +I E
Sbjct: 536 IIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKE 595
Query: 208 MRSKGFQLNSFVYGKVIGLYRDNGMWK 234
MRS GF ++ VI + D + K
Sbjct: 596 MRSCGFVGDASTISMVINMLHDGRLEK 622
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 169 bits (429), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 106/420 (25%), Positives = 200/420 (47%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
SY+ + C+ G++D+ L+ M+ G P+S Y S+I L + + EA+ F EM
Sbjct: 283 SYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM 342
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
+ G P Y L+ GF K+G + S+ M I + TY ++ G +
Sbjct: 343 IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM 402
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSI 258
+ + +EM KG + +S + ++I Y G K A + + + G S + Y ++
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTL 462
Query: 259 IDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGF 318
ID K G+L A E+ +M + ++P+I T+NS++ CK+G++ +A++L + + G
Sbjct: 463 IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 522
Query: 319 YPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEE 378
D + T++ + G+ D ++ + M +G + +L++ + +G D E+
Sbjct: 523 NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK 582
Query: 379 CIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFG 438
+ + +G+ P+ + F L Y + + + + M G+ P+ L+
Sbjct: 583 LLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHC 642
Query: 439 VAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRK 498
A KEA ++ MK G S + TYS L+K F++ KKF + E++ QM G D++
Sbjct: 643 KARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKE 702
Score = 147 bits (372), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 186/412 (45%), Gaps = 35/412 (8%)
Query: 127 RTLEADAIFQEMVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYE 186
+T A +F+E G + YNI++ + G + LL++ME G + +Y
Sbjct: 226 KTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYS 285
Query: 187 ILLDYHVNAGRLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREM 246
+++ + G LD W +I M+ KG + NS++YG +IGL +A E+
Sbjct: 286 TVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ 345
Query: 247 GLSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKA 306
G+ D +Y ++ID F K G++ A + F +M I PD++T+ ++I C+ GD+ +A
Sbjct: 346 GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 405
Query: 307 LELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDI 366
+LF +M +G PD F +I+ + G + +M G Y L+D
Sbjct: 406 GKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDG 465
Query: 367 YGQYGRFRDPEECIAALKLEGLQP--------------SGSM------------------ 394
+ G E + + GLQP SG++
Sbjct: 466 LCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNAD 525
Query: 395 ---FCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYH 451
+ L +AY + G ++ ++L+ M +G++P +V NVL+N F + G ++ + +
Sbjct: 526 TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN 585
Query: 452 LMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQIL 503
M GI+P+ T+++L+K + IYK M S G PD K + L
Sbjct: 586 WMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENL 637
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 162/394 (41%), Gaps = 38/394 (9%)
Query: 115 YASLIEALASVGRTLEADAIFQEMVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVME 174
+ + L G EA +F++M+ +G + N+ L L K + +++ E
Sbjct: 178 FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTR-LSKDCYKTATAIIVFRE 236
Query: 175 --DMGICRNQETYEILLDYHVNAGRLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGM 232
++G+C N +Y I++ + GR+ + ++ M KG+ + Y V+ Y G
Sbjct: 237 FPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGE 296
Query: 233 WKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNS 292
K ++E ++ GL + IY SII + +L EA E F +M ++ I PD V + +
Sbjct: 297 LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTT 356
Query: 293 LIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRG 352
LI CK GD+ A + F +M + PD + IIS ++G K F M
Sbjct: 357 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF--- 413
Query: 353 HGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTV 412
+GL+P F L N Y + G +
Sbjct: 414 --------------------------------CKGLEPDSVTFTELINGYCKAGHMKDAF 441
Query: 413 KVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAF 472
+V M G PN+V LI+ G A + H M IG+ P++ TY++++
Sbjct: 442 RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGL 501
Query: 473 IRAKKFHKVPEIYKQMESSGCTPDRKARQILQSA 506
++ + ++ + E++G D L A
Sbjct: 502 CKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA 535
Score = 122 bits (306), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 155/357 (43%), Gaps = 35/357 (9%)
Query: 80 YNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMV 139
Y I CK GDI A +M + P ++Y ++I +G +EA +F EM
Sbjct: 354 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 413
Query: 140 CFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLD 199
C G P + L+ G+ K G + R+ M G N TY L+D G LD
Sbjct: 414 CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 473
Query: 200 DTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSII 259
+++EM G Q N F Y ++ +G ++AV +V E GL+ D Y +++
Sbjct: 474 SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM 533
Query: 260 DTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFY 319
D + K GE+ +A E+ ++M + ++P IVT+N L+ C G + +L M +G
Sbjct: 534 DAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIA 593
Query: 320 PDPKIFITIIS--CL-------------------GELGKW--DVIKKN------------ 344
P+ F +++ C+ G GK +++K +
Sbjct: 594 PNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFL 653
Query: 345 FENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFCILANA 401
F+ MK +G + Y++L+ + + +F + E ++ EGL +F ++
Sbjct: 654 FQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDT 710
Score = 106 bits (264), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 134/294 (45%)
Query: 72 GEEFSGNSYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEA 131
G E ++ + I CK G + +A + M G P+ ++Y +LI+ L G A
Sbjct: 416 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 475
Query: 132 DAIFQEMVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDY 191
+ + EM G P + YN ++ G K G + +L+ E G+ + TY L+D
Sbjct: 476 NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA 535
Query: 192 HVNAGRLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLD 251
+ +G +D I+ EM KG Q + ++ + +GM + ++ + G++ +
Sbjct: 536 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 595
Query: 252 RQIYNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFT 311
+NS++ + L A +++ M + PD T+ +L++ HCKA ++ +A LF
Sbjct: 596 ATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQ 655
Query: 312 QMQEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVD 365
+M+ +GF + +I + K+ ++ F+ M+ G I+ D
Sbjct: 656 EMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSD 709
Score = 92.0 bits (227), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 101/218 (46%), Gaps = 35/218 (16%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+YN + CK G+I+EA+ L+ + +A G + +++Y +L++A G +A I +EM
Sbjct: 493 TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 552
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQ---------------- 182
+ G P + +N+L+ GF G+L G +LL M GI N
Sbjct: 553 LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL 612
Query: 183 -------------------ETYEILLDYHVNAGRLDDTWLIINEMRSKGFQLNSFVYGKV 223
+TYE L+ H A + + W + EM+ KGF ++ Y +
Sbjct: 613 KAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVL 672
Query: 224 IGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDT 261
I + + +A + +++R GL+ D++I++ DT
Sbjct: 673 IKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDT 710
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 169 bits (429), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 105/409 (25%), Positives = 195/409 (47%)
Query: 88 CKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKL 147
C I +A+AL+ QM +G+ P +I++ +LI L + EA A+ MV G P L
Sbjct: 166 CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL 225
Query: 148 RFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINE 207
Y +++ G K+G + L LL ME I N Y ++D DD + E
Sbjct: 226 VTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTE 285
Query: 208 MRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGE 267
M +KG + N Y +I + W A ++ ++ E ++ + +N++ID F K G+
Sbjct: 286 MENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGK 345
Query: 268 LVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFIT 327
LVEA +++++M + SI PDI T++SLI C + +A +F M + +P+ + T
Sbjct: 346 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 405
Query: 328 IISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEG 387
+I+ + + D + F M RG Y L+ + Q + + + +G
Sbjct: 406 LINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG 465
Query: 388 LQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEAL 447
+ P+ + L + + G E+ + V + ++ +EP + N++I AGK ++
Sbjct: 466 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 525
Query: 448 SVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPD 496
++ + G+ PD++ Y+T++ F R + ++++M G PD
Sbjct: 526 DLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/405 (23%), Positives = 191/405 (47%), Gaps = 2/405 (0%)
Query: 93 IDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKLRFYNI 152
+D+A+ L M PS + L+ A+A + + ++ ++M G + L YNI
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI 125
Query: 153 LLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINEMRSKG 212
L+ F ++ + L LL M +G + T LL+ + + R+ D ++++M G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 213 FQLNSFVYGKVI-GLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGELVEA 271
++ ++ + +I GL+ N +AV +V+ + + G + Y +++ K G++ A
Sbjct: 186 YRPDTITFTTLIHGLFLHNKA-SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 272 LEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISC 331
+ KM+ I ++V ++++I CK AL LFT+M+ +G P+ + ++ISC
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
Query: 332 LGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPS 391
L +W + +M +R + L+D + + G+ + E+ + + P
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 364
Query: 392 GSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYH 451
+ L N + ++ + +LM + PN+V N LIN F A + E + ++
Sbjct: 365 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFR 424
Query: 452 LMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPD 496
M G+ + VTY+TL+ F +A+ ++KQM S G P+
Sbjct: 425 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPN 469
Score = 125 bits (315), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 93/417 (22%), Positives = 178/417 (42%), Gaps = 35/417 (8%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+YN I C+ I A+ALL +M LG+ PS ++ +SL+ R +A A+ +M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
V G+ P + L+ G N+ + + L
Sbjct: 182 VEMGYRPDTITFTTLIHGLF--------------------LHNKASEAVAL--------- 212
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSI 258
++ M +G Q N YG V+ G A ++ ++ + + IY+++
Sbjct: 213 ------VDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTV 266
Query: 259 IDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGF 318
ID+ KY +AL +F +M+ + +RP+++T++SLI C + A L + M E+
Sbjct: 267 IDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKI 326
Query: 319 YPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEE 378
P+ F +I + GK +K ++ M R Y+ L++ + + R + +
Sbjct: 327 NPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 386
Query: 379 CIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFG 438
+ + P+ + L N + + ++ V++ + M G+ N V LI+ F
Sbjct: 387 MFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFF 446
Query: 439 VAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTP 495
A A V+ M G+ P+++TY+TL+ + K K +++ ++ S P
Sbjct: 447 QARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 503
Score = 112 bits (280), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 129/274 (47%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+Y+ I C +A LL+ M +P+ +++ +LI+A G+ +EA+ ++ EM
Sbjct: 297 TYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEM 356
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
+ +P + Y+ L+ GF L + +M N TY L++ A R+
Sbjct: 357 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRI 416
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSI 258
D+ + EM +G N+ Y +I + A + +++ G+ + YN++
Sbjct: 417 DEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTL 476
Query: 259 IDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGF 318
+D K G+L +A+ VFE +Q+ + P I T+N +I CKAG V +LF + +G
Sbjct: 477 LDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 536
Query: 319 YPDPKIFITIISCLGELGKWDVIKKNFENMKDRG 352
PD I+ T+IS G + F M++ G
Sbjct: 537 KPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570
Score = 106 bits (264), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 153/347 (44%), Gaps = 35/347 (10%)
Query: 80 YNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMV 139
Y+ I CK D+A+ L +M+ G P+ I+Y+SLI L + R +A + +M+
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 140 CFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLD 199
NP + +N L+ F+K+G L +L M I + TY L++ RLD
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 382
Query: 200 DTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSII 259
+ + M SK N Y +I + + V + E+ + GL + Y ++I
Sbjct: 383 EAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLI 442
Query: 260 DTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFY 319
F + + A VF++M + + P+I+T+N+L+ CK G + KA+ +F +Q
Sbjct: 443 HGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM- 501
Query: 320 PDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEEC 379
+P I+ Y I+++ + G+ D +
Sbjct: 502 -EPTIY---------------------------------TYNIMIEGMCKAGKVEDGWDL 527
Query: 380 IAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPN 426
+L L+G++P ++ + + + ++GL E+ + + M +G P+
Sbjct: 528 FCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574
Score = 102 bits (253), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 111/243 (45%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
++N I K G + EA L +M P +Y+SLI R EA +F+ M
Sbjct: 332 TFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 391
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
+ P + YN L+ GF K + G L M G+ N TY L+ A
Sbjct: 392 ISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDC 451
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSI 258
D+ ++ +M S G N Y ++ NG +KA+ + E ++ + YN +
Sbjct: 452 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 511
Query: 259 IDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGF 318
I+ K G++ + ++F + + ++PD++ +N++I C+ G +A LF +M+E G
Sbjct: 512 IEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGP 571
Query: 319 YPD 321
PD
Sbjct: 572 LPD 574
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 166 bits (420), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 203/416 (48%), Gaps = 2/416 (0%)
Query: 93 IDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKLRFYNI 152
+D+A+ L M PS + + L+ A+A + + ++ ++M G + L Y+I
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 153 LLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINEMRSKG 212
+ F ++ L L +L M +G + T LL+ + ++ R+ D ++++M G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 213 FQLNSFVYGKVI-GLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGELVEA 271
++ ++F + +I GL+ N +AV +V+++ + G D Y ++++ K G++ A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKA-SEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 272 LEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISC 331
L + +KM++ I D+V +N++I CK + AL LFT+M +G PD + ++ISC
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 332 LGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPS 391
L G+W + +M +R ++ L+D + + G+ + E+ + + P
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362
Query: 392 GSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYH 451
+ L N + ++ + +LM + PN+V + LI F A + +E + ++
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR 422
Query: 452 LMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQILQSAL 507
M G+ + VTY+TL+ F +A+ ++KQM S G P+ IL L
Sbjct: 423 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGL 478
Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 115/444 (25%), Positives = 202/444 (45%), Gaps = 35/444 (7%)
Query: 88 CKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKL 147
C I +A+AL+ QM +G+ P + ++ +LI L + EA A+ +MV G P L
Sbjct: 164 CHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDL 223
Query: 148 RFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINE 207
Y ++ G K+G + L LL ME I + Y ++D +DD + E
Sbjct: 224 VTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTE 283
Query: 208 MRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGE 267
M +KG + + F Y +I + G W A ++ ++ E ++ + ++++ID F K G+
Sbjct: 284 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 343
Query: 268 LVEALEVFEKMQQESIRPDI-----------------------------------VTWNS 292
LVEA +++++M + SI PDI VT+++
Sbjct: 344 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYST 403
Query: 293 LIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRG 352
LI+ CKA V + +ELF +M ++G + + T+I + D + F+ M G
Sbjct: 404 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVG 463
Query: 353 HGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTV 412
Y IL+D + G+ L+ ++P + I+ + G E
Sbjct: 464 VHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGW 523
Query: 413 KVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAF 472
++ + +G+ PN++ N +I+ F G +EA S+ MK+ G P+ TY+TL++A
Sbjct: 524 ELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRAR 583
Query: 473 IRAKKFHKVPEIYKQMESSGCTPD 496
+R E+ K+M S G D
Sbjct: 584 LRDGDREASAELIKEMRSCGFAGD 607
Score = 149 bits (376), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 108/463 (23%), Positives = 209/463 (45%), Gaps = 35/463 (7%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLI----------EALASVGRT 128
+Y+ I C+ + A+A+LA+M LG+ P ++ +SL+ +A+A V +
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 179
Query: 129 L-------------------------EADAIFQEMVCFGFNPKLRFYNILLRGFLKKGLL 163
+ EA A+ +MV G P L Y ++ G K+G +
Sbjct: 180 VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239
Query: 164 GLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINEMRSKGFQLNSFVYGKV 223
L LL ME I + Y ++D +DD + EM +KG + + F Y +
Sbjct: 240 DLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSL 299
Query: 224 IGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQESI 283
I + G W A ++ ++ E ++ + ++++ID F K G+LVEA +++++M + SI
Sbjct: 300 ISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 359
Query: 284 RPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKK 343
PDI T++SLI C + +A +F M + +P+ + T+I + + + +
Sbjct: 360 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGME 419
Query: 344 NFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFCILANAYA 403
F M RG Y L+ + Q + + + G+ P+ + IL +
Sbjct: 420 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 479
Query: 404 QQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLV 463
+ G + + V + ++ +EP++ N++I AGK ++ ++ + G+SP+++
Sbjct: 480 KNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVI 539
Query: 464 TYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQILQSA 506
Y+T++ F R + + K+M+ G P+ L A
Sbjct: 540 AYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRA 582
Score = 135 bits (340), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 97/422 (22%), Positives = 190/422 (45%), Gaps = 10/422 (2%)
Query: 80 YNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMV 139
+NK + K+ + ++L QMQ LG +Y+ I + A A+ +M+
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 140 CFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLD 199
G+ P + + LL G+ + L+ M +MG + T+ L+ +
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205
Query: 200 DTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKK-----AVGIVEEIREMGLSLDRQI 254
+ ++++M +G Q + YG V+ NG+ K+ A+ +++++ + + D I
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVV-----NGLCKRGDIDLALSLLKKMEKGKIEADVVI 260
Query: 255 YNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQ 314
YN+IID KY + +AL +F +M + IRPD+ T++SLI C G + A L + M
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 315 EQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFR 374
E+ P+ F +I + GK +K ++ M R Y+ L++ + + R
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 380
Query: 375 DPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLI 434
+ + + + P+ + L + + E+ +++ + M G+ N V LI
Sbjct: 381 EAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLI 440
Query: 435 NAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCT 494
+ F A A V+ M +G+ P+++TY+ L+ + K K +++ ++ S
Sbjct: 441 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME 500
Query: 495 PD 496
PD
Sbjct: 501 PD 502
Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 145/322 (45%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+Y+ I C G +A LL+ M +P+ +++++LI+A G+ +EA+ ++ EM
Sbjct: 295 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 354
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
+ +P + Y+ L+ GF L + +M N TY L+ A R+
Sbjct: 355 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRV 414
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSI 258
++ + EM +G N+ Y +I + A + +++ +G+ + YN +
Sbjct: 415 EEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNIL 474
Query: 259 IDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGF 318
+D K G+L +A+ VFE +Q+ ++ PDI T+N +I CKAG V ELF + +G
Sbjct: 475 LDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGV 534
Query: 319 YPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEE 378
P+ + T+IS G + + MK+ G Y L+ + G E
Sbjct: 535 SPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAE 594
Query: 379 CIAALKLEGLQPSGSMFCILAN 400
I ++ G S ++ N
Sbjct: 595 LIKEMRSCGFAGDASTIGLVTN 616
Score = 112 bits (281), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 165/385 (42%), Gaps = 35/385 (9%)
Query: 80 YNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMV 139
YN I CK +D+A+ L +M G P +Y+SLI L + GR +A + +M+
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 140 CFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLD 199
NP + ++ L+ F+K+G L +L M I + TY L++ RLD
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 380
Query: 200 DTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSII 259
+ + M SK N Y +I + ++ + + E+ + GL + Y ++I
Sbjct: 381 EAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLI 440
Query: 260 DTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFY 319
F + + A VF++M + P+I+T+N L+ CK G +AKA+ +F +Q
Sbjct: 441 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME 500
Query: 320 PDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEEC 379
PD I+ Y I+++ + G+ D E
Sbjct: 501 PD--IY---------------------------------TYNIMIEGMCKAGKVEDGWEL 525
Query: 380 IAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGV 439
L L+G+ P+ + + + + ++G E+ +L+ M+ +G PN N LI A
Sbjct: 526 FCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLR 585
Query: 440 AGKYKEALSVYHLMKDIGISPDLVT 464
G + + + M+ G + D T
Sbjct: 586 DGDREASAELIKEMRSCGFAGDAST 610
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 71/156 (45%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+YN + CK G + +AM + +Q P +Y +IE + G+ + +F +
Sbjct: 470 TYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNL 529
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
G +P + YN ++ GF +KG LL M++ G N TY L+ + G
Sbjct: 530 SLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDR 589
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWK 234
+ + +I EMRS GF ++ G V + D + K
Sbjct: 590 EASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDK 625
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 166 bits (419), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 111/430 (25%), Positives = 201/430 (46%), Gaps = 2/430 (0%)
Query: 69 SNSGEEFSGNSYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRT 128
S SG + + N + CK G +++ L+Q+Q G +P ++Y +LI A +S G
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLM 286
Query: 129 LEADAIFQEMVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEIL 188
EA + M GF+P + YN ++ G K G + M G+ + TY L
Sbjct: 287 EEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL 346
Query: 189 LDYHVNAGRLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGL 248
L G + +T + ++MRS+ + + ++ L+ +G KA+ ++E GL
Sbjct: 347 LMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGL 406
Query: 249 SLDRQIYNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALE 308
D IY +I + + G + A+ + +M Q+ D+VT+N+++ CK + +A +
Sbjct: 407 IPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADK 466
Query: 309 LFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYG 368
LF +M E+ +PD +I +LG + F+ MK++ Y L+D +G
Sbjct: 467 LFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFG 526
Query: 369 QYGRFRDPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLV 428
+ G +E A + + + P+ + IL NA +G + +V M + I+P ++
Sbjct: 527 KVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVM 586
Query: 429 MLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQM 488
+ N +I + +G + S M G PD ++Y+TL+ F+R + K + K+M
Sbjct: 587 ICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKM 646
Query: 489 ESS--GCTPD 496
E G PD
Sbjct: 647 EEEQGGLVPD 656
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/457 (23%), Positives = 196/457 (42%), Gaps = 37/457 (8%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+YN I G ++EA L+ M GF P +Y ++I L G+ A +F EM
Sbjct: 272 TYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEM 331
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
+ G +P Y LL KKG + ++ M + + + ++ +G L
Sbjct: 332 LRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNL 391
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSI 258
D + N ++ G ++ +Y +I Y GM A+ + E+ + G ++D YN+I
Sbjct: 392 DKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTI 451
Query: 259 IDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGF 318
+ K L EA ++F +M + ++ PD T LI HCK G++ A+ELF +M+E+
Sbjct: 452 LHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRI 511
Query: 319 YPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDI------------ 366
D + T++ G++G D K+ + +M + Y+ILV+
Sbjct: 512 RLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFR 571
Query: 367 -----------------------YGQYGRFRDPEECIAALKLEGLQPSGSMFCILANAYA 403
Y + G D E + + EG P + L +
Sbjct: 572 VWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFV 631
Query: 404 QQGLCEQTVKVLQLMEPE--GIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPD 461
++ + +++ ME E G+ P++ N +++ F + KEA V M + G++PD
Sbjct: 632 REENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPD 691
Query: 462 LVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRK 498
TY+ ++ F+ + I+ +M G +PD K
Sbjct: 692 RSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDDK 728
Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 174/395 (44%), Gaps = 10/395 (2%)
Query: 118 LIEALASVGRTLEADAIFQEMVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMG 177
LI + EA F + GF + N L+ ++ G + L + + G
Sbjct: 171 LIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSG 230
Query: 178 ICRNQETYEILLDYHVNAGRLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAV 237
+ N T I+++ G+++ +++++ KG + Y +I Y G+ ++A
Sbjct: 231 VGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAF 290
Query: 238 GIVEEIREMGLSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWH 297
++ + G S YN++I+ K+G+ A EVF +M + + PD T+ SL+
Sbjct: 291 ELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEA 350
Query: 298 CKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIG 357
CK GDV + ++F+ M+ + PD F +++S G D F ++K+ G
Sbjct: 351 CKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDN 410
Query: 358 AIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTV----- 412
IY IL+ Y + G L+ E LQ +M + N GLC++ +
Sbjct: 411 VIYTILIQGYCRKGMI----SVAMNLRNEMLQQGCAMDVVTYNTILH-GLCKRKMLGEAD 465
Query: 413 KVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAF 472
K+ M + P+ L +LI+ G + A+ ++ MK+ I D+VTY+TL+ F
Sbjct: 466 KLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGF 525
Query: 473 IRAKKFHKVPEIYKQMESSGCTPDRKARQILQSAL 507
+ EI+ M S P + IL +AL
Sbjct: 526 GKVGDIDTAKEIWADMVSKEILPTPISYSILVNAL 560
Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 178/403 (44%), Gaps = 23/403 (5%)
Query: 106 LGFH-----PSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKLRFYNILLRGFLKK 160
LGFH +S+S +++I L GR +A + M+ +L N L F
Sbjct: 102 LGFHFPNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNC 161
Query: 161 GLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINEMRSKGFQLNSFVY 220
G N +++L+ +V A +L + +RSKGF ++
Sbjct: 162 G------------------SNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDAC 203
Query: 221 GKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQ 280
+IG G + A G+ +EI G+ ++ N +++ K G++ + ++Q+
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQE 263
Query: 281 ESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWDV 340
+ + PDIVT+N+LI + G + +A EL M +GF P + T+I+ L + GK++
Sbjct: 264 KGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYER 323
Query: 341 IKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFCILAN 400
K+ F M G Y L+ + G + E+ + ++ + P F + +
Sbjct: 324 AKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMS 383
Query: 401 AYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISP 460
+ + G ++ + ++ G+ P+ V+ +LI + G A+++ + M G +
Sbjct: 384 LFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAM 443
Query: 461 DLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQIL 503
D+VTY+T++ + K + +++ +M PD IL
Sbjct: 444 DVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTIL 486
Score = 38.9 bits (89), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+YN + C+ + EA +L +M G +P +Y +I S EA I EM
Sbjct: 659 TYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEM 718
Query: 139 VCFGFNPKLRF 149
+ GF+P +F
Sbjct: 719 LQRGFSPDDKF 729
Score = 38.5 bits (88), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 63/161 (39%), Gaps = 17/161 (10%)
Query: 363 LVDIYGQYGRFRDPEECIAAL-------KLEGLQP----------SGSMFCILANAYAQQ 405
++ I + GR D + C+ + +LE + + S+F +L Y Q
Sbjct: 119 MIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQA 178
Query: 406 GLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTY 465
+ + L+ +G ++ N LI + G + A VY + G+ ++ T
Sbjct: 179 RKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTL 238
Query: 466 STLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQILQSA 506
+ ++ A + K KV Q++ G PD L SA
Sbjct: 239 NIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISA 279
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 166 bits (419), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 198/410 (48%), Gaps = 1/410 (0%)
Query: 88 CKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKL 147
C I EA+AL+ QM +G+ P ++++ +L+ L + EA A+ + MV G P L
Sbjct: 156 CHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDL 215
Query: 148 RFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINE 207
Y ++ G K+G L LL ME I + Y ++D +DD + + N+
Sbjct: 216 VTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNK 275
Query: 208 MRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGE 267
M +KG + + F Y +I + G W A ++ ++ E ++ D +N++ID F K G+
Sbjct: 276 METKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGK 335
Query: 268 LVEALEVFEKM-QQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFI 326
LVEA +++++M + + PD+V +N+LI+ CK V + +E+F +M ++G + +
Sbjct: 336 LVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYT 395
Query: 327 TIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLE 386
T+I + D + F+ M G Y IL+D G ++
Sbjct: 396 TLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKR 455
Query: 387 GLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEA 446
++ + + A + G E + + +G++PN+V +++ F G +EA
Sbjct: 456 DMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEA 515
Query: 447 LSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPD 496
+++ MK+ G P+ TY+TL++A +R E+ K+M S G D
Sbjct: 516 DALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGD 565
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/423 (25%), Positives = 193/423 (45%), Gaps = 11/423 (2%)
Query: 80 YNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMV 139
++K + K+ D ++L QMQ LG + +Y+ I + A AI +M+
Sbjct: 78 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMM 137
Query: 140 CFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLD 199
G+ P + N LL GF + L+ M +MG + T+ L+ +
Sbjct: 138 KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS 197
Query: 200 DTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKK-----AVGIVEEIREMGLSLDRQI 254
+ ++ M KG Q + YG VI NG+ K+ A+ ++ ++ + + D I
Sbjct: 198 EAVALVERMVVKGCQPDLVTYGAVI-----NGLCKRGEPDLALNLLNKMEKGKIEADVVI 252
Query: 255 YNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQ 314
YN+IID KY + +A ++F KM+ + I+PD+ T+N LI C G + A L + M
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312
Query: 315 EQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAI-YAILVDIYGQYGRF 373
E+ PD F +I + GK +K ++ M H + Y L+ + +Y R
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRV 372
Query: 374 RDPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVL 433
+ E + GL + + L + + Q C+ V + M +G+ P+++ N+L
Sbjct: 373 EEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNIL 432
Query: 434 INAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGC 493
++ G + AL V+ M+ + D+VTY+T+++A +A K +++ + G
Sbjct: 433 LDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGV 492
Query: 494 TPD 496
P+
Sbjct: 493 KPN 495
Score = 139 bits (351), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 106/436 (24%), Positives = 198/436 (45%), Gaps = 50/436 (11%)
Query: 93 IDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKLRFYNI 152
+D+A+ L M PS + ++ L+ A+A + + ++ ++M G + L Y+I
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 153 LLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINEMRSKG 212
+ F ++ L L +L M +G + T LL+ + R+ + ++++M G
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 213 FQLNSFVYGKVI-GLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGELVEA 271
+Q ++ + ++ GL++ N +AV +VE + G D Y ++I+ K GE A
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKA-SEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 272 LEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISC 331
L + KM++ I D+V +N++I CK + A +LF +M+ +G PD + +ISC
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 332 LGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPS 391
L YGR+ D ++ + + + P
Sbjct: 295 LC-----------------------------------NYGRWSDASRLLSDMLEKNINPD 319
Query: 392 GSMFCILANAYAQQGLCEQTVKVL-QLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVY 450
F L +A+ ++G + K+ ++++ + P++V N LI F + +E + V+
Sbjct: 320 LVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVF 379
Query: 451 HLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQIL------- 503
M G+ + VTY+TL+ F +A+ ++KQM S G PD IL
Sbjct: 380 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNN 439
Query: 504 ---QSALVVLE--QRR 514
++ALVV E Q+R
Sbjct: 440 GNVETALVVFEYMQKR 455
Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 139/314 (44%), Gaps = 6/314 (1%)
Query: 80 YNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMV 139
YN I CK +D+A L +M+ G P +Y LI L + GR +A + +M+
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312
Query: 140 CFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGIC-RNQETYEILLDYHVNAGRL 198
NP L F+N L+ F+K+G L +L M C + Y L+ R+
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRV 372
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSI 258
++ + EM +G N+ Y +I + A + +++ G+ D YN +
Sbjct: 373 EEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNIL 432
Query: 259 IDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGF 318
+D G + AL VFE MQ+ ++ DIVT+ ++I CKAG V +LF + +G
Sbjct: 433 LDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGV 492
Query: 319 YPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEE 378
P+ + T++S G + F MK+ G Y L+ R RD +E
Sbjct: 493 KPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLI-----RARLRDGDE 547
Query: 379 CIAALKLEGLQPSG 392
+A ++ ++ G
Sbjct: 548 AASAELIKEMRSCG 561
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 136/309 (44%), Gaps = 46/309 (14%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+YN I C G +A LL+ M +P + + +LI+A G+ +EA+ ++ EM
Sbjct: 287 TYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEM 346
Query: 139 V----CFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVN 194
V CF P + YN L++GF K + G + M G+ N TY L+
Sbjct: 347 VKSKHCF---PDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQ 403
Query: 195 AGRLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQI 254
A D+ ++ +M S G + Y ++ +NG + A+ + E +++ + LD
Sbjct: 404 ARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVT 463
Query: 255 YNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTW------------------------ 290
Y ++I+ K G++ + ++F + + ++P++VT+
Sbjct: 464 YTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMK 523
Query: 291 -----------NSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWD 339
N+LIR + GD A + EL +M+ GF D F + + L + G+ D
Sbjct: 524 EDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHD-GRLD 582
Query: 340 VIKKNFENM 348
K+F +M
Sbjct: 583 ---KSFLDM 588
Score = 62.8 bits (151), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 94/230 (40%)
Query: 267 ELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFI 326
+L +A+ +F M + P IV ++ L+ K + L QMQ G + +
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 327 TIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLE 386
I+ + + M G+G L++ + R + + +
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 387 GLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEA 446
G QP F L + Q + V +++ M +G +P+LV +IN G+ A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 447 LSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPD 496
L++ + M+ I D+V Y+T++ + K +++ +ME+ G PD
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPD 284
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 166 bits (419), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 192/419 (45%)
Query: 88 CKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKL 147
C I +A+AL+ QM +G+ P +I++ +LI L + EA A+ MV G P L
Sbjct: 91 CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL 150
Query: 148 RFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINE 207
Y +++ G K+G + L LL ME I + + ++D +DD + E
Sbjct: 151 VTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKE 210
Query: 208 MRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGE 267
M +KG + N Y +I G W A ++ ++ E ++ + +N++ID F K G+
Sbjct: 211 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 270
Query: 268 LVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFIT 327
VEA ++ + M + SI PDI T+NSLI C + KA ++F M + +PD + T
Sbjct: 271 FVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNT 330
Query: 328 IISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEG 387
+I + + + + F M RG Y L+ G + ++ + +G
Sbjct: 331 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 390
Query: 388 LQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEAL 447
+ P + IL + G E+ ++V M+ I+ ++ + +I AGK +
Sbjct: 391 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 450
Query: 448 SVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQILQSA 506
++ + G+ P++VTY+T++ + + + K+M+ G PD L A
Sbjct: 451 DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRA 509
Score = 142 bits (357), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 185/399 (46%), Gaps = 2/399 (0%)
Query: 110 PSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKLRFYNILLRGFLKKGLLGLGSRL 169
PS + L+ A+A + + ++ ++M G + L YNIL+ F ++ + L L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 170 LMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINEMRSKGFQLNSFVYGKVI-GLYR 228
L M +G + T LL+ + + R+ D ++++M G++ ++ + +I GL+
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 229 DNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQESIRPDIV 288
N +AV +V+ + + G + Y +++ K G++ A + KM+ I D+V
Sbjct: 128 HNK-ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 186
Query: 289 TWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNFENM 348
+N++I CK V AL LF +M+ +G P+ + ++ISCL G+W + +M
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246
Query: 349 KDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFCILANAYAQQGLC 408
++ + L+D + + G+F + E+ + + P + L N +
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 306
Query: 409 EQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTL 468
++ ++ + M + P+L N LI F + + ++ ++ M G+ D VTY+TL
Sbjct: 307 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 366
Query: 469 MKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQILQSAL 507
++ +++KQM S G PD IL L
Sbjct: 367 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 405
Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/469 (22%), Positives = 194/469 (41%), Gaps = 80/469 (17%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+YN I C+ I A+ALL +M LG+ PS ++ +SL+ R +A A+ +M
Sbjct: 47 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 106
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
V G+ P + L+ G N+ + + L
Sbjct: 107 VEMGYRPDTITFTTLIHGLF--------------------LHNKASEAVAL--------- 137
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKK-----AVGIVEEIREMGLSLDRQ 253
++ M +G Q N YG V+ NG+ K+ A ++ ++ + D
Sbjct: 138 ------VDRMVQRGCQPNLVTYGVVV-----NGLCKRGDIDLAFNLLNKMEAAKIEADVV 186
Query: 254 IYNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQM 313
I+N+IID+ KY + +AL +F++M+ + IRP++VT++SLI C G + A +L + M
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246
Query: 314 QEQGFYPDPKIFITIISCLGELGKW--------DVIKKN--------------------- 344
E+ P+ F +I + GK+ D+IK++
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 306
Query: 345 ------FENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFCIL 398
FE M + Y L+ + + R D E + GL + L
Sbjct: 307 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 366
Query: 399 ANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGI 458
G C+ KV + M +G+ P+++ ++L++ GK ++AL V+ M+ I
Sbjct: 367 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 426
Query: 459 SPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQILQSAL 507
D+ Y+T+++ +A K +++ + G P+ + S L
Sbjct: 427 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 475
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/412 (24%), Positives = 175/412 (42%), Gaps = 35/412 (8%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+Y + CK GDID A LL +M+A + + ++I++L +A +F+EM
Sbjct: 152 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 211
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
G P + Y+ L+ G S+LL M + I N T+ L+D V G+
Sbjct: 212 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 271
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSI 258
+ + ++M + + F YNS+
Sbjct: 272 VEAEKLHDDMIKRSIDPDIFT-----------------------------------YNSL 296
Query: 259 IDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGF 318
I+ F + L +A ++FE M + PD+ T+N+LI+ CK+ V ELF +M +G
Sbjct: 297 INGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGL 356
Query: 319 YPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEE 378
D + T+I L G D +K F+ M G Y+IL+D G+ E
Sbjct: 357 VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALE 416
Query: 379 CIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFG 438
++ ++ ++ + + G + + + +G++PN+V N +I+
Sbjct: 417 VFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLC 476
Query: 439 VAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMES 490
+EA ++ MK+ G PD TY+TL++A +R E+ ++M S
Sbjct: 477 SKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 528
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 128/305 (41%), Gaps = 39/305 (12%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
++N I K G EA L M P +Y SLI R +A +F+ M
Sbjct: 257 TFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFM 316
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
V P L YN L++GF K + G+ L M G+ + TY L+ + G
Sbjct: 317 VSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 376
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSI 258
D+ + +M S G + Y ++ +NG +KA+ + + +++ + LD IY ++
Sbjct: 377 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 436
Query: 259 IDTFGKYGE-----------------------------------LVEALEVFEKMQQESI 283
I+ K G+ L EA + +KM+++
Sbjct: 437 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 496
Query: 284 RPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKK 343
PD T+N+LIR H + GD A + EL +M+ F D I +++ + G+ D K
Sbjct: 497 LPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST-IGLVANMLHDGRLD---K 552
Query: 344 NFENM 348
+F +M
Sbjct: 553 SFLDM 557
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 95/203 (46%)
Query: 78 NSYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQE 137
++YN I+ CK +++ L +M G +++Y +LI+ L G A +F++
Sbjct: 326 DTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 385
Query: 138 MVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGR 197
MV G P + Y+ILL G G L + M+ I + Y +++ AG+
Sbjct: 386 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 445
Query: 198 LDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNS 257
+DD W + + KG + N Y +I + ++A ++++++E G D YN+
Sbjct: 446 VDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNT 505
Query: 258 IIDTFGKYGELVEALEVFEKMQQ 280
+I + G+ + E+ +M+
Sbjct: 506 LIRAHLRDGDKAASAELIREMRS 528
>sp|Q8S8P6|PP180_ARATH Pentatricopeptide repeat-containing protein At2g32630
OS=Arabidopsis thaliana GN=At2g32630 PE=3 SV=1
Length = 624
Score = 165 bits (417), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 196/411 (47%)
Query: 93 IDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKLRFYNI 152
ID + + +M G + S ++E L G ++ + +E G P+ YN
Sbjct: 205 IDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNT 264
Query: 153 LLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINEMRSKG 212
++ ++K+ +L VM+ G+ N+ TY +L++ V G++ D + +EMR +G
Sbjct: 265 IINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERG 324
Query: 213 FQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGELVEAL 272
+ + VY +I G K+A + +E+ E GLS Y ++ID K GE+ A
Sbjct: 325 IESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAE 384
Query: 273 EVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCL 332
+ +MQ + + V +N+LI +C+ G V +A ++ M+++GF D TI SC
Sbjct: 385 ILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCF 444
Query: 333 GELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSG 392
L ++D K+ M + G Y L+D+Y + G + + + +G+QP+
Sbjct: 445 NRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNA 504
Query: 393 SMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHL 452
+ ++ AY +QG ++ K+ ME G++P+ LI+ +A EA+ ++
Sbjct: 505 ITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSE 564
Query: 453 MKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQIL 503
M G+ + VTY+ ++ +A K + +Y +M+ G T D K L
Sbjct: 565 MGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTAL 615
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/400 (20%), Positives = 181/400 (45%)
Query: 70 NSGEEFSGNSYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTL 129
+SG + + S ++ C+ G+++++ L+ + G P + +Y ++I A
Sbjct: 217 DSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFS 276
Query: 130 EADAIFQEMVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILL 189
+ + + M G Y +L+ +K G + +L M + GI + Y L+
Sbjct: 277 GVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLI 336
Query: 190 DYHVNAGRLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLS 249
++ G + +L+ +E+ KG +S+ YG +I G A ++ E++ G++
Sbjct: 337 SWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVN 396
Query: 250 LDRQIYNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALEL 309
+ + ++N++ID + + G + EA +++ M+Q+ + D+ T N++ + +A +
Sbjct: 397 ITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQW 456
Query: 310 FTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQ 369
+M E G + +I + G + K+ F M +G Y +++ Y +
Sbjct: 457 LFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCK 516
Query: 370 YGRFRDPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVM 429
G+ ++ + A ++ G+ P + L + ++ +++ M +G++ N V
Sbjct: 517 QGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVT 576
Query: 430 LNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLM 469
V+I+ AGK EA +Y MK G + D Y+ L+
Sbjct: 577 YTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 115 bits (289), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 141/306 (46%), Gaps = 6/306 (1%)
Query: 72 GEEFSGNSYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEA 131
G E + Y I + C+ G++ A L ++ G PSS +Y +LI+ + VG A
Sbjct: 324 GIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAA 383
Query: 132 DAIFQEMVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDY 191
+ + EM G N +N L+ G+ +KG++ S + VME G + T +
Sbjct: 384 EILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASC 443
Query: 192 HVNAGRLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLD 251
R D+ + M G +L++ Y +I +Y G ++A + E+ G+ +
Sbjct: 444 FNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPN 503
Query: 252 RQIYNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFT 311
YN +I + K G++ EA ++ M+ + PD T+ SLI C A +V +A+ LF+
Sbjct: 504 AITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFS 563
Query: 312 QMQEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYG 371
+M +G + + +IS L + GK D ++ MK +G+ +Y L+ G
Sbjct: 564 EMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI------G 617
Query: 372 RFRDPE 377
PE
Sbjct: 618 SMHSPE 623
Score = 112 bits (279), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/366 (21%), Positives = 173/366 (47%), Gaps = 6/366 (1%)
Query: 134 IFQEMVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHV 193
+F MV G + R + L K+ + L + M D G+ + I+++
Sbjct: 176 VFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLC 235
Query: 194 NAGRLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQ 253
G ++ + +I E KG + ++ Y +I Y + G+++ +++ G+ ++
Sbjct: 236 RRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKV 295
Query: 254 IYNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQM 313
Y +++ K G++ +A ++F++M++ I D+ + SLI W+C+ G++ +A LF ++
Sbjct: 296 TYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDEL 355
Query: 314 QEQGFYPDPKIFITIIS--C-LGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQY 370
E+G P + +I C +GE+G +++ M+ +G ++ L+D Y +
Sbjct: 356 TEKGLSPSSYTYGALIDGVCKVGEMGAAEIL---MNEMQSKGVNITQVVFNTLIDGYCRK 412
Query: 371 GRFRDPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVML 430
G + ++ +G Q +A+ + + ++ + L M G++ + V
Sbjct: 413 GMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSY 472
Query: 431 NVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMES 490
LI+ + G +EA ++ M G+ P+ +TY+ ++ A+ + K + ++ ME+
Sbjct: 473 TNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEA 532
Query: 491 SGCTPD 496
+G PD
Sbjct: 533 NGMDPD 538
Score = 99.4 bits (246), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/354 (20%), Positives = 160/354 (45%), Gaps = 16/354 (4%)
Query: 151 NILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINEMRS 210
+++ R ++ G+ G R+ M G+ ++ + + L R+D I M
Sbjct: 158 DLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVD 217
Query: 211 KGFQLNSFVYGKVI-GLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGELV 269
G ++ + V+ GL R G +K+ +++E G+ + YN+II+ + K +
Sbjct: 218 SGVKITVYSLTIVVEGLCR-RGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFS 276
Query: 270 EALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITII 329
V + M+++ + + VT+ L+ K G ++ A +LF +M+E+G D ++ ++I
Sbjct: 277 GVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLI 336
Query: 330 SCLGELGKWDVIKKN-------FENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAA 382
S W+ K N F+ + ++G Y L+D + G E +
Sbjct: 337 S-------WNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNE 389
Query: 383 LKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGK 442
++ +G+ + +F L + Y ++G+ ++ + +ME +G + ++ N + + F +
Sbjct: 390 MQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKR 449
Query: 443 YKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPD 496
Y EA M + G+ V+Y+ L+ + + + ++ +M S G P+
Sbjct: 450 YDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPN 503
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 67/157 (42%), Gaps = 35/157 (22%)
Query: 69 SNSGEEFSGNSYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRT 128
S+ G + + +YN I CK G I EA L A M+A G P S +Y SLI
Sbjct: 496 SSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNV 555
Query: 129 LEADAIFQEMVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEIL 188
EA +F EM GL GL +N TY ++
Sbjct: 556 DEAMRLFSEM----------------------GLKGLD-------------QNSVTYTVM 580
Query: 189 LDYHVNAGRLDDTWLIINEMRSKGFQLNSFVYGKVIG 225
+ AG+ D+ + + +EM+ KG+ +++ VY +IG
Sbjct: 581 ISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIG 617
Score = 36.6 bits (83), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/110 (19%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Query: 394 MFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLM 453
+F + A + LC +++ + M G++ + L +++ G+ +++ +
Sbjct: 194 VFLVAAKKRRRIDLC---LEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEF 250
Query: 454 KDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQIL 503
GI P+ TY+T++ A+++ + F V + K M+ G ++ +L
Sbjct: 251 SVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLL 300
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 163 bits (413), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/419 (25%), Positives = 192/419 (45%)
Query: 88 CKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKL 147
C I +A+AL+ QM +G+ P +I++ +LI L + EA A+ MV G P L
Sbjct: 166 CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL 225
Query: 148 RFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINE 207
Y +++ G K+G L LL ME I + + ++D +DD + E
Sbjct: 226 VTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKE 285
Query: 208 MRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGE 267
M +KG + N Y +I G W A ++ ++ E ++ + +N++ID F K G+
Sbjct: 286 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 345
Query: 268 LVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFIT 327
VEA ++++ M + SI PDI T+NSL+ C + KA ++F M + +PD + T
Sbjct: 346 FVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNT 405
Query: 328 IISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEG 387
+I + + + + F M RG Y L+ G + ++ + +G
Sbjct: 406 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 465
Query: 388 LQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEAL 447
+ P + IL + G E+ ++V M+ I+ ++ + +I AGK +
Sbjct: 466 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 525
Query: 448 SVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQILQSA 506
++ + G+ P++VTY+T++ + + + K+M+ G P+ L A
Sbjct: 526 DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRA 584
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 192/416 (46%), Gaps = 2/416 (0%)
Query: 93 IDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKLRFYNI 152
+D+A+ L M PS + + L+ A+A + + ++ ++M L YNI
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125
Query: 153 LLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINEMRSKG 212
L+ F ++ + L LL M +G + T LL+ + + R+ D ++++M G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 213 FQLNSFVYGKVI-GLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGELVEA 271
++ ++ + +I GL+ N +AV +V+ + + G + Y +++ K G+ A
Sbjct: 186 YRPDTITFTTLIHGLFLHNKA-SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 272 LEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISC 331
L + KM+ I D+V +N++I CK V AL LF +M+ +G P+ + ++ISC
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304
Query: 332 LGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPS 391
L G+W + +M ++ + L+D + + G+F + E+ + + P
Sbjct: 305 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD 364
Query: 392 GSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYH 451
+ L N + ++ ++ + M + P++V N LI F + + ++ ++
Sbjct: 365 IFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFR 424
Query: 452 LMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQILQSAL 507
M G+ D VTY+TL++ +++KQM S G PD IL L
Sbjct: 425 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 480
Score = 139 bits (349), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 97/429 (22%), Positives = 188/429 (43%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+YN I C+ I A+ALL +M LG+ PS ++ +SL+ R +A A+ +M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
V G+ P + L+ G L+ M G N TY ++++ G
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSI 258
D ++N+M + + + ++ +I A+ + +E+ G+ + Y+S+
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 301
Query: 259 IDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGF 318
I YG +A ++ M ++ I P++VT+N+LI K G +A +L+ M ++
Sbjct: 302 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 361
Query: 319 YPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEE 378
PD + ++++ + D K+ FE M + Y L+ + + R D E
Sbjct: 362 DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTE 421
Query: 379 CIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFG 438
+ GL + L G C+ KV + M +G+ P+++ ++L++
Sbjct: 422 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 481
Query: 439 VAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRK 498
GK ++AL V+ M+ I D+ Y+T+++ +A K +++ + G P+
Sbjct: 482 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 541
Query: 499 ARQILQSAL 507
+ S L
Sbjct: 542 TYNTMISGL 550
Score = 125 bits (315), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 97/412 (23%), Positives = 176/412 (42%), Gaps = 35/412 (8%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+Y + CK GD D A+ LL +M+A + + ++I++L +A +F+EM
Sbjct: 227 TYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 286
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
G P + Y+ L+ G S+LL M + I N T+ L+D V G+
Sbjct: 287 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 346
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSI 258
+ + ++M + + F YNS+
Sbjct: 347 VEAEKLYDDMIKRSIDPDIFT-----------------------------------YNSL 371
Query: 259 IDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGF 318
++ F + L +A ++FE M + PD+VT+N+LI+ CK+ V ELF +M +G
Sbjct: 372 VNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGL 431
Query: 319 YPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEE 378
D + T+I L G D +K F+ M G Y+IL+D G+ E
Sbjct: 432 VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALE 491
Query: 379 CIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFG 438
++ ++ ++ + + G + + + +G++PN+V N +I+
Sbjct: 492 VFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLC 551
Query: 439 VAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMES 490
+EA ++ MK+ G P+ TY+TL++A +R E+ ++M S
Sbjct: 552 SKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRS 603
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 129/305 (42%), Gaps = 39/305 (12%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
++N I K G EA L M P +Y SL+ R +A +F+ M
Sbjct: 332 TFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFM 391
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
V P + YN L++GF K + G+ L M G+ + TY L+ + G
Sbjct: 392 VSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 451
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSI 258
D+ + +M S G + Y ++ +NG +KA+ + + +++ + LD IY ++
Sbjct: 452 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 511
Query: 259 IDTFGKYGELVEALEVFEKMQQESIRPDIVTWNS-------------------------- 292
I+ K G++ + ++F + + ++P++VT+N+
Sbjct: 512 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 571
Query: 293 ---------LIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKK 343
LIR H + GD A + EL +M+ F D I +++ + G+ D K
Sbjct: 572 LPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST-IGLVANMLHDGRLD---K 627
Query: 344 NFENM 348
+F +M
Sbjct: 628 SFLDM 632
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 198/422 (46%), Gaps = 8/422 (1%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAI---F 135
SYN I K EAM + +M GF PS +Y+SL+ L G+ + D++
Sbjct: 190 SYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGL---GKRRDIDSVMGLL 246
Query: 136 QEMVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNA 195
+EM G P + + I +R + G + +L M+D G + TY +L+D A
Sbjct: 247 KEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTA 306
Query: 196 GRLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIY 255
+LD + +M++ + + Y ++ + DN E+ + G D +
Sbjct: 307 RKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTF 366
Query: 256 NSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQE 315
++D K G EA + + M+ + I P++ T+N+LI + + ALELF M+
Sbjct: 367 TILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMES 426
Query: 316 QGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHG-KIGAIYAILVDIYGQYGRFR 374
G P +I I G+ G + FE MK +G I A A L + + GR R
Sbjct: 427 LGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSL-AKAGRDR 485
Query: 375 DPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLI 434
+ ++ LK GL P + ++ Y++ G ++ +K+L M G EP+++++N LI
Sbjct: 486 EAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLI 545
Query: 435 NAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCT 494
N A + EA ++ MK++ + P +VTY+TL+ + K + E+++ M GC
Sbjct: 546 NTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCP 605
Query: 495 PD 496
P+
Sbjct: 606 PN 607
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 182/398 (45%), Gaps = 3/398 (0%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIF-QE 137
+Y I C +D A + +M+ P ++Y +L++ + R L++ F E
Sbjct: 295 TYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSD-NRDLDSVKQFWSE 353
Query: 138 MVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGR 197
M G P + + IL+ K G G L VM D GI N TY L+ + R
Sbjct: 354 MEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHR 413
Query: 198 LDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNS 257
LDD + M S G + ++ Y I Y +G A+ E+++ G++ + N+
Sbjct: 414 LDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNA 473
Query: 258 IIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQG 317
+ + K G EA ++F ++ + PD VT+N +++ + K G++ +A++L ++M E G
Sbjct: 474 SLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENG 533
Query: 318 FYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPE 377
PD + ++I+ L + + D K F MK+ Y L+ G+ G+ ++
Sbjct: 534 CEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAI 593
Query: 378 ECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAF 437
E + +G P+ F L + + +K+L M G P++ N +I
Sbjct: 594 ELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGL 653
Query: 438 GVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRA 475
G+ KEA+ +H MK + + PD VT TL+ ++A
Sbjct: 654 VKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKA 690
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 187/409 (45%), Gaps = 6/409 (1%)
Query: 91 GDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKLRFY 150
G ++E + MQ + +Y ++ ++L+ G +A ++M FGF Y
Sbjct: 132 GKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSY 191
Query: 151 NILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGR---LDDTWLIINE 207
N L+ LK + M G + +TY L+ V G+ +D ++ E
Sbjct: 192 NGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLM---VGLGKRRDIDSVMGLLKE 248
Query: 208 MRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGE 267
M + G + N + + I + G +A I++ + + G D Y +ID +
Sbjct: 249 METLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARK 308
Query: 268 LVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFIT 327
L A EVFEKM+ +PD VT+ +L+ D+ + +++M++ G PD F
Sbjct: 309 LDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTI 368
Query: 328 IISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEG 387
++ L + G + + M+D+G Y L+ + R D E ++ G
Sbjct: 369 LVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLG 428
Query: 388 LQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEAL 447
++P+ + + + Y + G ++ + M+ +GI PN+V N + + AG+ +EA
Sbjct: 429 VKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAK 488
Query: 448 SVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPD 496
+++ +KDIG+ PD VTY+ +MK + + + + ++ +M +GC PD
Sbjct: 489 QIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPD 537
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 186/412 (45%), Gaps = 2/412 (0%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
++ I+ + G I+EA +L +M G P ++Y LI+AL + + A +F++M
Sbjct: 260 TFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKM 319
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
P Y LL F L + ME G + T+ IL+D AG
Sbjct: 320 KTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNF 379
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVI-GLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNS 257
+ + ++ MR +G N Y +I GL R + + A+ + + +G+ Y
Sbjct: 380 GEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRL-DDALELFGNMESLGVKPTAYTYIV 438
Query: 258 IIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQG 317
ID +GK G+ V ALE FEKM+ + I P+IV N+ + KAG +A ++F +++ G
Sbjct: 439 FIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIG 498
Query: 318 FYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPE 377
PD + ++ C ++G+ D K M + G + L++ + R +
Sbjct: 499 LVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAW 558
Query: 378 ECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAF 437
+ +K L+P+ + L + G ++ +++ + M +G PN + N L +
Sbjct: 559 KMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCL 618
Query: 438 GVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQME 489
+ AL + M D+G PD+ TY+T++ ++ + + + QM+
Sbjct: 619 CKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK 670
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 154/330 (46%), Gaps = 2/330 (0%)
Query: 141 FGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDD 200
G PKL YN+L+ G L+ ++ + + + ++ G + TY LLD + +G++D+
Sbjct: 779 LGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDE 838
Query: 201 TWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEI-REMGLSLDRQIYNSII 259
+ + EM + + N+ + VI G A+ + ++ + S Y +I
Sbjct: 839 LFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLI 898
Query: 260 DTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFY 319
D K G L EA ++FE M RP+ +N LI KAG+ A LF +M ++G
Sbjct: 899 DGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVR 958
Query: 320 PDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEEC 379
PD K + ++ CL +G+ D F+ +K+ G Y ++++ G+ R +
Sbjct: 959 PDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVL 1018
Query: 380 IAALKL-EGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFG 438
+K G+ P + L G+ E+ K+ ++ G+EPN+ N LI +
Sbjct: 1019 FNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYS 1078
Query: 439 VAGKYKEALSVYHLMKDIGISPDLVTYSTL 468
++GK + A +VY M G SP+ TY L
Sbjct: 1079 LSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 132 bits (332), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 108/469 (23%), Positives = 200/469 (42%), Gaps = 39/469 (8%)
Query: 78 NSYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQE 137
++YN I ++ +D+A+ L M++LG P++ +Y I+ G ++ A F++
Sbjct: 399 HTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEK 458
Query: 138 MVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGR 197
M G P + N L K G ++ ++D+G+ + TY +++ + G
Sbjct: 459 MKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGE 518
Query: 198 LDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNS 257
+D+ +++EM G + + V +I +A + ++EM L YN+
Sbjct: 519 IDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNT 578
Query: 258 IIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQG 317
++ GK G++ EA+E+FE M Q+ P+ +T+N+L CK +V AL++ +M + G
Sbjct: 579 LLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMG 638
Query: 318 FYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPE 377
PD + TII L + G+ F MK + + +L + + D
Sbjct: 639 CVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVV-KASLIEDAY 697
Query: 378 ECIAALKLEGLQPSGSMF------CILANA-----------YAQQGLCEQTVKVL----- 415
+ I ++F ILA A G+C +L
Sbjct: 698 KIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIR 757
Query: 416 ----------------QLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGIS 459
+ + G++P L N+LI A + A V+ +K G
Sbjct: 758 YSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCI 817
Query: 460 PDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQILQSALV 508
PD+ TY+ L+ A+ ++ K ++ E+YK+M + C + I+ S LV
Sbjct: 818 PDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLV 866
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 146/324 (45%)
Query: 172 VMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNG 231
V ++ + ET +L+ G+L++ + + M+ + + ++ Y + G
Sbjct: 108 VAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKG 167
Query: 232 MWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWN 291
K+A + ++RE G L+ YN +I K EA+EV+ +M E RP + T++
Sbjct: 168 GLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYS 227
Query: 292 SLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDR 351
SL+ K D+ + L +M+ G P+ F I LG GK + + + M D
Sbjct: 228 SLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDE 287
Query: 352 GHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQT 411
G G Y +L+D + +E +K +P + L + ++ +
Sbjct: 288 GCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSV 347
Query: 412 VKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKA 471
+ ME +G P++V +L++A AG + EA +M+D GI P+L TY+TL+
Sbjct: 348 KQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICG 407
Query: 472 FIRAKKFHKVPEIYKQMESSGCTP 495
+R + E++ MES G P
Sbjct: 408 LLRVHRLDDALELFGNMESLGVKP 431
Score = 119 bits (299), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 107/490 (21%), Positives = 201/490 (41%), Gaps = 74/490 (15%)
Query: 81 NKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVC 140
N I K +DEA + +M+ + P+ ++Y +L+ L G+ EA +F+ MV
Sbjct: 542 NSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQ 601
Query: 141 FGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDM--------------GICRNQETYE 186
G P +N L K + L ++L M DM G+ +N + E
Sbjct: 602 KGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKE 661
Query: 187 ILLDYH--------------------VNAGRLDDTWLII-NEMRSKGFQLNSFVYGKVIG 225
+ +H V A ++D + II N + + Q + + +IG
Sbjct: 662 AMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIG 721
Query: 226 LYRDNGMWKKAVGIVEEIREMGLSLD-RQIYNSIIDTFGKYGELVEALEVFEKMQQE-SI 283
AV E + G+ D I II K+ + A +FEK ++ +
Sbjct: 722 SILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGV 781
Query: 284 RPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWD---- 339
+P + T+N LI +A + A ++F Q++ G PD + ++ G+ GK D
Sbjct: 782 QPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFE 841
Query: 340 -------------VIKKN-------------------FENMKDRGHGKIGAIYAILVDIY 367
I N ++ M DR Y L+D
Sbjct: 842 LYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGL 901
Query: 368 GQYGRFRDPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNL 427
+ GR + ++ + G +P+ +++ IL N + + G + + + M EG+ P+L
Sbjct: 902 SKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDL 961
Query: 428 VMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQ 487
+VL++ + G+ E L + +K+ G++PD+V Y+ ++ ++ + + ++ +
Sbjct: 962 KTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNE 1021
Query: 488 MESS-GCTPD 496
M++S G TPD
Sbjct: 1022 MKTSRGITPD 1031
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 105/470 (22%), Positives = 178/470 (37%), Gaps = 38/470 (8%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+YN ++ K+G+IDEA+ LL++M G P I SLI L R EA +F M
Sbjct: 505 TYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRM 564
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
P + YN LL G K G + L M G N T+ L D +
Sbjct: 565 KEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEV 624
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREM------------ 246
++ +M G + F Y +I NG K+A+ +++++
Sbjct: 625 TLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLL 684
Query: 247 ----GLSLDRQIYNSIIDTFGKYGE-------------------LVEALEVFEKMQQESI 283
SL Y I + + + A+ E++ I
Sbjct: 685 PGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGI 744
Query: 284 -RPDIVTWNSLIRWHCKAGDVAKALELFTQM-QEQGFYPDPKIFITIISCLGELGKWDVI 341
R +IR+ CK +V+ A LF + ++ G P + +I L E ++
Sbjct: 745 CRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIA 804
Query: 342 KKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFCILANA 401
+ F +K G A Y L+D YG+ G+ + E + + + I+ +
Sbjct: 805 QDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISG 864
Query: 402 YAQQGLCEQTVKVL-QLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISP 460
+ G + + + LM P LI+ +G+ EA ++ M D G P
Sbjct: 865 LVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRP 924
Query: 461 DLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQILQSALVVL 510
+ Y+ L+ F +A + ++K+M G PD K +L L ++
Sbjct: 925 NCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMV 974
Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 116/280 (41%), Gaps = 35/280 (12%)
Query: 228 RDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQESIRPDI 287
R +G ++ + + +++ + D Y +I + G L +A KM++ +
Sbjct: 129 RVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNA 188
Query: 288 VTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNFEN 347
++N LI K+ +A+E++ +M +GF P + + +++ LG
Sbjct: 189 YSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLG-------------- 234
Query: 348 MKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFCILANAYAQQGL 407
K R DI G ++ E GL+P+ F I + G
Sbjct: 235 -KRR-------------DIDSVMGLLKEMETL-------GLKPNVYTFTICIRVLGRAGK 273
Query: 408 CEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYST 467
+ ++L+ M+ EG P++V VLI+A A K A V+ MK PD VTY T
Sbjct: 274 INEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYIT 333
Query: 468 LMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQILQSAL 507
L+ F + V + + +ME G PD IL AL
Sbjct: 334 LLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDAL 373
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 103/258 (39%), Gaps = 38/258 (14%)
Query: 71 SGEEFSGN--SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRT 128
S +FS +Y I K G + EA L M G P+ Y LI G
Sbjct: 883 SDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEA 942
Query: 129 LEADAIFQEMVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEIL 188
A A+F+ MV G P L+ TY +L
Sbjct: 943 DAACALFKRMVKEGVRPDLK-----------------------------------TYSVL 967
Query: 189 LDYHVNAGRLDDTWLIINEMRSKGFQLNSFVYGKVI-GLYRDNGMWKKAVGIVEEIREMG 247
+D GR+D+ E++ G + Y +I GL + + + + V E G
Sbjct: 968 VDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRG 1027
Query: 248 LSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKAL 307
++ D YNS+I G G + EA +++ ++Q+ + P++ T+N+LIR + +G A
Sbjct: 1028 ITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAY 1087
Query: 308 ELFTQMQEQGFYPDPKIF 325
++ M GF P+ +
Sbjct: 1088 AVYQTMVTGGFSPNTGTY 1105
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/444 (25%), Positives = 202/444 (45%), Gaps = 35/444 (7%)
Query: 88 CKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKL 147
C I EA+AL+ QM G+ P+++++ +LI L + EA A+ MV G P L
Sbjct: 162 CHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDL 221
Query: 148 RFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINE 207
Y +++ G K+G L LL ME + Y ++D +DD + E
Sbjct: 222 VTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKE 281
Query: 208 MRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGE 267
M +KG + N Y +I + G W A ++ ++ E ++ D ++++ID F K G+
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341
Query: 268 LVEALEVFEKMQQESIRP-----------------------------------DIVTWNS 292
LVEA +++++M + SI P D+VT+N+
Sbjct: 342 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNT 401
Query: 293 LIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRG 352
LI+ CK V + +E+F +M ++G + + +I L + G D+ ++ F+ M G
Sbjct: 402 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG 461
Query: 353 HGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTV 412
Y L+D + G+ L+ ++P+ + I+ + G E
Sbjct: 462 VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 521
Query: 413 KVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAF 472
+ + +G++P++V N +I+ F G +EA +++ MK+ G P+ Y+TL++A
Sbjct: 522 DLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRAR 581
Query: 473 IRAKKFHKVPEIYKQMESSGCTPD 496
+R E+ K+M S G D
Sbjct: 582 LRDGDREASAELIKEMRSCGFAGD 605
Score = 139 bits (350), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 189/416 (45%), Gaps = 37/416 (8%)
Query: 93 IDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKLRFYNI 152
+D+A+AL +M PS I ++ L+ A+A + + ++ ++M G Y+I
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 153 LLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINEMRSKG 212
L+ F ++ L L +L M +G N T LL+ + ++ R+ + ++++M G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 213 FQLNSFVYGKVI-GLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGELVEA 271
+Q N+ + +I GL+ N +A+ +++ + G D Y +++ K G+ A
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKA-SEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 272 LEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISC 331
+ KM+Q + P ++ +N++I CK + AL LF +M+ +G P+ + ++ISC
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 332 LGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPS 391
L YGR+ D ++ + + P
Sbjct: 301 LC-----------------------------------NYGRWSDASRLLSDMIERKINPD 325
Query: 392 GSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYH 451
F L +A+ ++G + K+ M I+P++V + LIN F + + EA ++
Sbjct: 326 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 385
Query: 452 LMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQILQSAL 507
M PD+VTY+TL+K F + K+ + E++++M G + IL L
Sbjct: 386 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGL 441
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/416 (24%), Positives = 186/416 (44%)
Query: 80 YNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMV 139
++K + K+ D ++L QMQ LG + +Y+ LI + A A+ +M+
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMM 143
Query: 140 CFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLD 199
G+ P + + LL G+ + L+ M G N T+ L+ +
Sbjct: 144 KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKAS 203
Query: 200 DTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSII 259
+ +I+ M +KG Q + YG V+ G A ++ ++ + L IYN+II
Sbjct: 204 EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTII 263
Query: 260 DTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFY 319
D KY + +AL +F++M+ + IRP++VT++SLI C G + A L + M E+
Sbjct: 264 DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 323
Query: 320 PDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEEC 379
PD F +I + GK +K ++ M R Y+ L++ + + R + ++
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 383
Query: 380 IAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGV 439
+ + P + L + + E+ ++V + M G+ N V N+LI
Sbjct: 384 FEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 443
Query: 440 AGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTP 495
AG A ++ M G+ P+++TY+TL+ + K K +++ ++ S P
Sbjct: 444 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 145/323 (44%), Gaps = 2/323 (0%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+Y+ I C G +A LL+ M +P ++++LI+A G+ +EA+ ++ EM
Sbjct: 293 TYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
V +P + Y+ L+ GF L ++ M + TY L+ R+
Sbjct: 353 VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRV 412
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVI-GLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNS 257
++ + EM +G N+ Y +I GL++ G A I +E+ G+ + YN+
Sbjct: 413 EEGMEVFREMSQRGLVGNTVTYNILIQGLFQ-AGDCDMAQEIFKEMVSDGVPPNIMTYNT 471
Query: 258 IIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQG 317
++D K G+L +A+ VFE +Q+ + P I T+N +I CKAG V +LF + +G
Sbjct: 472 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG 531
Query: 318 FYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPE 377
PD + T+IS G + F+ MK+ G Y L+ + G
Sbjct: 532 VKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASA 591
Query: 378 ECIAALKLEGLQPSGSMFCILAN 400
E I ++ G S ++ N
Sbjct: 592 ELIKEMRSCGFAGDASTIGLVTN 614
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 169/385 (43%), Gaps = 35/385 (9%)
Query: 80 YNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMV 139
YN I CK +D+A+ L +M+ G P+ ++Y+SLI L + GR +A + +M+
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318
Query: 140 CFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLD 199
NP + ++ L+ F+K+G L +L M I + TY L++ RLD
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 378
Query: 200 DTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSII 259
+ + M SK + Y +I + ++ + + E+ + GL + YN +I
Sbjct: 379 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 438
Query: 260 DTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFY 319
+ G+ A E+F++M + + P+I+T+N+L+ CK G + KA+ +F +Q
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM- 497
Query: 320 PDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEEC 379
+P I+ Y I+++ + G+ D +
Sbjct: 498 -EPTIY---------------------------------TYNIMIEGMCKAGKVEDGWDL 523
Query: 380 IAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGV 439
L L+G++P + + + + ++G E+ + + M+ +G PN N LI A
Sbjct: 524 FCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLR 583
Query: 440 AGKYKEALSVYHLMKDIGISPDLVT 464
G + + + M+ G + D T
Sbjct: 584 DGDREASAELIKEMRSCGFAGDAST 608
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+YN + CK G +++AM + +Q P+ +Y +IE + G+ + +F +
Sbjct: 468 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNL 527
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
G P + YN ++ GF +KG L M++ G N Y L+ + G
Sbjct: 528 SLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDR 587
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWK 234
+ + +I EMRS GF ++ G V + D + K
Sbjct: 588 EASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDK 623
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/241 (19%), Positives = 99/241 (41%)
Query: 267 ELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFI 326
+L +A+ +F +M + P I+ ++ L+ K + L QMQ G + +
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 327 TIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLE 386
+I+C + + M G+ + L++ Y R + + + +
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 387 GLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEA 446
G QP+ F L + + + ++ M +G +P+LV V++N G A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 447 LSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQILQSA 506
++ + M+ + P ++ Y+T++ + K ++K+ME+ G P+ L S
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 507 L 507
L
Sbjct: 301 L 301
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 160 bits (404), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/421 (24%), Positives = 192/421 (45%), Gaps = 7/421 (1%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+Y I C+ D+D A + +M G + ++Y LI L R EA +F +M
Sbjct: 255 TYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKM 314
Query: 139 V---CFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNA 195
CF P +R Y +L++ L+ ME+ GI N TY +L+D +
Sbjct: 315 KDDECF---PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQ 371
Query: 196 GRLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIY 255
+ + ++ +M KG N Y +I Y GM + AV +VE + LS + + Y
Sbjct: 372 CKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTY 431
Query: 256 NSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQE 315
N +I + K + +A+ V KM + + PD+VT+NSLI C++G+ A L + M +
Sbjct: 432 NELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMND 490
Query: 316 QGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRD 375
+G PD + ++I L + + + F++++ +G +Y L+D Y + G+ +
Sbjct: 491 RGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDE 550
Query: 376 PEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLIN 435
+ + + P+ F L + G ++ + + M G++P + +LI+
Sbjct: 551 AHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIH 610
Query: 436 AFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTP 495
G + A S + M G PD TY+T ++ + R + ++ +M +G +P
Sbjct: 611 RLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSP 670
Query: 496 D 496
D
Sbjct: 671 D 671
Score = 152 bits (384), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 107/418 (25%), Positives = 191/418 (45%), Gaps = 1/418 (0%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+YNK + CKLG+++EA ++++ G P +Y SLI A +F EM
Sbjct: 220 TYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEM 279
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
G Y L+ G + L + M+D TY +L+ + R
Sbjct: 280 PLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERK 339
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSI 258
+ ++ EM G + N Y +I ++KA ++ ++ E GL + YN++
Sbjct: 340 SEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNAL 399
Query: 259 IDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGF 318
I+ + K G + +A++V E M+ + P+ T+N LI+ +CK+ +V KA+ + +M E+
Sbjct: 400 INGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKV 458
Query: 319 YPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEE 378
PD + ++I G +D + M DRG Y ++D + R + +
Sbjct: 459 LPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACD 518
Query: 379 CIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFG 438
+L+ +G+ P+ M+ L + Y + G ++ +L+ M + PN + N LI+
Sbjct: 519 LFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLC 578
Query: 439 VAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPD 496
GK KEA + M IG+ P + T + L+ ++ F ++QM SSG PD
Sbjct: 579 ADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPD 636
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/429 (24%), Positives = 187/429 (43%), Gaps = 24/429 (5%)
Query: 78 NSYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQE 137
++Y I C ++A LL QM G P+ I+Y +LI G +A + +
Sbjct: 359 HTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVEL 418
Query: 138 MVCFGFNPKLRFYNILLRGFLKKGL---LGLGSRLLMVMEDMGICRNQETYEILLDYHVN 194
M +P R YN L++G+ K + +G+ +++L + + + TY L+D
Sbjct: 419 MESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKML----ERKVLPDVVTYNSLIDGQCR 474
Query: 195 AGRLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQI 254
+G D + +++ M +G + + Y +I + ++A + + + + G++ + +
Sbjct: 475 SGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVM 534
Query: 255 YNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQ 314
Y ++ID + K G++ EA + EKM ++ P+ +T+N+LI C G + +A L +M
Sbjct: 535 YTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMV 594
Query: 315 EQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFR 374
+ G P +I L + G +D F+ M G Y + Y + GR
Sbjct: 595 KIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLL 654
Query: 375 DPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLI 434
D E+ +A ++ G+ P + L Y G VL+ M G EP+ LI
Sbjct: 655 DAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLI 714
Query: 435 NAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCT 494
+ KY K G P+L S +M +F V E+ ++M T
Sbjct: 715 KHL-LEMKYG---------KQKGSEPELCAMSNMM-------EFDTVVELLEKMVEHSVT 757
Query: 495 PDRKARQIL 503
P+ K+ + L
Sbjct: 758 PNAKSYEKL 766
Score = 119 bits (298), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 102/434 (23%), Positives = 180/434 (41%), Gaps = 19/434 (4%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+YN I C+ G+ D A LL+ M G P +Y S+I++L R EA +F +
Sbjct: 464 TYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSL 523
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
G NP + Y L+ G+ K G + +L M N T+ L+ G+L
Sbjct: 524 EQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKL 583
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSI 258
+ L+ +M G Q +I +G + A +++ G D Y +
Sbjct: 584 KEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTF 643
Query: 259 IDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGF 318
I T+ + G L++A ++ KM++ + PD+ T++SLI+ + G A ++ +M++ G
Sbjct: 644 IQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGC 703
Query: 319 YPDPKIFITIISCLGEL--GK----------------WDVIKKNFENMKDRGHGKIGAIY 360
P F+++I L E+ GK +D + + E M + Y
Sbjct: 704 EPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSY 763
Query: 361 AILVDIYGQYGRFRDPEECIAALKL-EGLQPSGSMFCILANAYAQQGLCEQTVKVLQLME 419
L+ + G R E+ ++ EG+ PS +F L + + + KV+ M
Sbjct: 764 EKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMI 823
Query: 420 PEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFH 479
G P L VLI G+ + SV+ + G D + + ++ +
Sbjct: 824 CVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVE 883
Query: 480 KVPEIYKQMESSGC 493
E++ ME +GC
Sbjct: 884 AFYELFNVMEKNGC 897
Score = 119 bits (298), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 173/389 (44%), Gaps = 16/389 (4%)
Query: 118 LIEALASVGRTLEADAIFQEMVCFGFNPKLRF----------YNILLRGFLKKGLLGLGS 167
+I++ SVG DA++ +C N RF YN LL + GL+
Sbjct: 149 MIKSCDSVG-----DALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMK 203
Query: 168 RLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINEMRSKGFQLNSFVYGKVIGLY 227
++ M M + +C N TY +++ + G +++ ++++ G + F Y +I Y
Sbjct: 204 QVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGY 263
Query: 228 RDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQESIRPDI 287
A + E+ G + Y +I + EA+++F KM+ + P +
Sbjct: 264 CQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTV 323
Query: 288 VTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNFEN 347
T+ LI+ C + ++AL L +M+E G P+ + +I L K++ ++
Sbjct: 324 RTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQ 383
Query: 348 MKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFCILANAYAQQGL 407
M ++G Y L++ Y + G D + + ++ L P+ + L Y + +
Sbjct: 384 MLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNV 443
Query: 408 CEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYST 467
+ + VL M + P++V N LI+ +G + A + LM D G+ PD TY++
Sbjct: 444 -HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTS 502
Query: 468 LMKAFIRAKKFHKVPEIYKQMESSGCTPD 496
++ + ++K+ + +++ +E G P+
Sbjct: 503 MIDSLCKSKRVEEACDLFDSLEQKGVNPN 531
Score = 112 bits (280), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 103/445 (23%), Positives = 190/445 (42%), Gaps = 22/445 (4%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+YN+ I+ CK ++ +AM +L +M P ++Y SLI+ G A + M
Sbjct: 430 TYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLM 488
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
G P Y ++ K + L +E G+ N Y L+D + AG++
Sbjct: 489 NDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKV 548
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSI 258
D+ L++ +M SK NS + +I +G K+A + E++ ++GL +
Sbjct: 549 DEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTIL 608
Query: 259 IDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGF 318
I K G+ A F++M +PD T+ + I+ +C+ G + A ++ +M+E G
Sbjct: 609 IHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGV 668
Query: 319 YPDPKIFITIISCLGELGKWDVIKKNFENMKDRG-----HGKIGAIYAILVDIYGQYGRF 373
PD + ++I G+LG+ + + M+D G H + I +L YG+ +
Sbjct: 669 SPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGK-QKG 727
Query: 374 RDPEECIAALKLE--------------GLQPSGSMFCILANAYAQQGLCEQTVKVLQLME 419
+PE C + +E + P+ + L + G KV M+
Sbjct: 728 SEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQ 787
Query: 420 -PEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKF 478
EGI P+ ++ N L++ K+ EA V M +G P L + L+ + +
Sbjct: 788 RNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEK 847
Query: 479 HKVPEIYKQMESSGCTPDRKARQIL 503
+ +++ + G D A +I+
Sbjct: 848 ERGTSVFQNLLQCGYYEDELAWKII 872
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 120/245 (48%)
Query: 255 YNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQ 314
YN+++++ ++G + E +V+ +M ++ + P+I T+N ++ +CK G+V +A + +++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 315 EQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFR 374
E G PD + ++I + D K F M +G + Y L+ R
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 375 DPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLI 434
+ + +K + P+ + +L + + + +++ ME GI+PN+ VLI
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 435 NAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCT 494
++ K+++A + M + G+ P+++TY+ L+ + + ++ + MES +
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 495 PDRKA 499
P+ +
Sbjct: 426 PNTRT 430
Score = 82.0 bits (201), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 146/373 (39%), Gaps = 54/373 (14%)
Query: 80 YNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMV 139
Y I CK G +DEA +L +M + P+S+++ +LI L + G+ EA + ++MV
Sbjct: 535 YTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMV 594
Query: 140 CFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLD 199
G P + IL+ LK G M G + TY + + GRL
Sbjct: 595 KIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLL 654
Query: 200 DTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSII 259
D ++ +MR G + F Y +I Y D G A +++ +R+ G + + S+I
Sbjct: 655 DAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLI 714
Query: 260 D-----TFGK----------------YGELVEALE------------------------- 273
+GK + +VE LE
Sbjct: 715 KHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVG 774
Query: 274 -------VFEKMQQ-ESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIF 325
VF+ MQ+ E I P + +N+L+ CK +A ++ M G P +
Sbjct: 775 NLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESC 834
Query: 326 ITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKL 385
+I L + G+ + F+N+ G+ + + I++D G+ G E ++
Sbjct: 835 KVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEK 894
Query: 386 EGLQPSGSMFCIL 398
G + S + +L
Sbjct: 895 NGCKFSSQTYSLL 907
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 99/214 (46%), Gaps = 7/214 (3%)
Query: 300 AGDVAKALELFTQM-QEQGFYPDPKIFI----TIISCLGELGKWDVIKKNF-ENMKDRGH 353
GD L+L +M +++ F K+ I T+++ L G D +K+ + E ++D+
Sbjct: 156 VGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVC 215
Query: 354 GKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVK 413
I Y +V+ Y + G + + ++ + GL P + L Y Q+ + K
Sbjct: 216 PNI-YTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFK 274
Query: 414 VLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFI 473
V M +G N V LI+ VA + EA+ ++ MKD P + TY+ L+K+
Sbjct: 275 VFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLC 334
Query: 474 RAKKFHKVPEIYKQMESSGCTPDRKARQILQSAL 507
+++ + + K+ME +G P+ +L +L
Sbjct: 335 GSERKSEALNLVKEMEETGIKPNIHTYTVLIDSL 368
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 137/326 (42%), Gaps = 29/326 (8%)
Query: 44 MRRCVKEG---YAYSLGNKNLSIKSPDGSNSGEEFSGNSYNKSIQYCCKLGDIDEAMALL 100
+ R +K+G +AYS + LS SG + ++Y IQ C+ G + +A ++
Sbjct: 609 IHRLLKDGDFDHAYSRFQQMLS--------SGTKPDAHTYTTFIQTYCREGRLLDAEDMM 660
Query: 101 AQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKLRFYNILLRGFLKK 160
A+M+ G P +Y+SLI+ +G+T A + + M G P + L++ L+
Sbjct: 661 AKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLE- 719
Query: 161 GLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINEMRSKGFQLNSFVY 220
+ G Q+ E L N D ++ +M N+ Y
Sbjct: 720 --MKYG--------------KQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSY 763
Query: 221 GKVIGLYRDNGMWKKAVGIVEEI-REMGLSLDRQIYNSIIDTFGKYGELVEALEVFEKMQ 279
K+I + G + A + + + R G+S ++N+++ K + EA +V + M
Sbjct: 764 EKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMI 823
Query: 280 QESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWD 339
P + + LI K G+ + +F + + G+Y D + II +G+ G +
Sbjct: 824 CVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVE 883
Query: 340 VIKKNFENMKDRGHGKIGAIYAILVD 365
+ F M+ G Y++L++
Sbjct: 884 AFYELFNVMEKNGCKFSSQTYSLLIE 909
Score = 48.9 bits (115), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 53/112 (47%)
Query: 398 LANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIG 457
L N+ A+ GL ++ +V M + + PN+ N ++N + G +EA + + G
Sbjct: 189 LLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAG 248
Query: 458 ISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQILQSALVV 509
+ PD TY++L+ + + K +++ +M GC + A L L V
Sbjct: 249 LDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCV 300
Score = 38.5 bits (88), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/158 (17%), Positives = 67/158 (42%)
Query: 356 IGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVL 415
I Y L++ ++G + ++ + + + P+ + + N Y + G E+ + +
Sbjct: 182 IIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYV 241
Query: 416 QLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRA 475
+ G++P+ LI + A V++ M G + V Y+ L+ A
Sbjct: 242 SKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVA 301
Query: 476 KKFHKVPEIYKQMESSGCTPDRKARQILQSALVVLEQR 513
++ + +++ +M+ C P + +L +L E++
Sbjct: 302 RRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERK 339
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 160 bits (404), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 115/461 (24%), Positives = 212/461 (45%), Gaps = 8/461 (1%)
Query: 46 RCVKEGYAYSLGNKNLSIKSPDGSNSGEEFSGNSYNKSIQYCCKLGDIDEAMALLAQMQA 105
RC K A+S K + + G E +++ I C G + EA+ L+ +M
Sbjct: 119 RCRKLSLAFSAMGKIIKL--------GYEPDTVTFSTLINGLCLEGRVSEALELVDRMVE 170
Query: 106 LGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKLRFYNILLRGFLKKGLLGL 165
+G P+ I+ +L+ L G+ +A + MV GF P Y +L+ K G L
Sbjct: 171 MGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTAL 230
Query: 166 GSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINEMRSKGFQLNSFVYGKVIG 225
LL ME+ I + Y I++D G LD+ + + NEM KGF+ + +Y +I
Sbjct: 231 AMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIR 290
Query: 226 LYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQESIRP 285
+ G W ++ ++ + ++ D ++++ID F K G+L EA E+ ++M Q I P
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISP 350
Query: 286 DIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNF 345
D VT+ SLI CK + KA + M +G P+ + F +I+ + D + F
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF 410
Query: 346 ENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFCILANAYAQQ 405
M RG Y L+ + + G+ +E + ++P + IL +
Sbjct: 411 RKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDN 470
Query: 406 GLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTY 465
G E+ +++ + +E +E ++ + N++I+ A K +A ++ + G+ PD+ TY
Sbjct: 471 GEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTY 530
Query: 466 STLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQILQSA 506
+ ++ + + ++++ME G +P+ IL A
Sbjct: 531 NIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRA 571
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/425 (22%), Positives = 186/425 (43%), Gaps = 2/425 (0%)
Query: 84 IQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGF 143
I CC+ + A + + ++ LG+ P ++++++LI L GR EA + MV G
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 144 NPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWL 203
P L N L+ G G + L+ M + G N+ TY +L +G+
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 204 IINEMRSKGFQLNSFVYGKVI-GLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTF 262
++ +M + +L++ Y +I GL +D G A + E+ G D IY ++I F
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKD-GSLDNAFNLFNEMEIKGFKADIIIYTTLIRGF 292
Query: 263 GKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDP 322
G + ++ M + I PD+V +++LI K G + +A EL +M ++G PD
Sbjct: 293 CYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDT 352
Query: 323 KIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAA 382
+ ++I + + D + M +G G + IL++ Y + D E
Sbjct: 353 VTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRK 412
Query: 383 LKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGK 442
+ L G+ + L + + G E ++ Q M + P++V +L++ G+
Sbjct: 413 MSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGE 472
Query: 443 YKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQI 502
++AL ++ ++ + D+ Y+ ++ A K +++ + G PD K I
Sbjct: 473 PEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNI 532
Query: 503 LQSAL 507
+ L
Sbjct: 533 MIGGL 537
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/415 (22%), Positives = 180/415 (43%), Gaps = 37/415 (8%)
Query: 130 EADAI--FQEMVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEI 187
E DA+ FQEM P+L ++ L + L L ME GI N T I
Sbjct: 53 EDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSI 112
Query: 188 LLDYHVNAGRLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMG 247
+++ +L + + ++ G++ ++ + +I G +A+ +V+ + EMG
Sbjct: 113 MINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMG 172
Query: 248 LSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKAL 307
N++++ G++ +A+ + ++M + +P+ VT+ +++ CK+G A A+
Sbjct: 173 HKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAM 232
Query: 308 ELFTQMQE-----------------------------------QGFYPDPKIFITIISCL 332
EL +M+E +GF D I+ T+I
Sbjct: 233 ELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGF 292
Query: 333 GELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSG 392
G+WD K +M R ++ L+D + + G+ R+ EE + G+ P
Sbjct: 293 CYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDT 352
Query: 393 SMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHL 452
+ L + + ++ ++ +L LM +G PN+ N+LIN + A + L ++
Sbjct: 353 VTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRK 412
Query: 453 MKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQILQSAL 507
M G+ D VTY+TL++ F K E++++M S PD + +IL L
Sbjct: 413 MSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGL 467
Score = 113 bits (283), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 140/288 (48%), Gaps = 5/288 (1%)
Query: 89 KLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKLR 148
K G + EA L +M G P +++Y SLI+ + +A+ + MV G P +R
Sbjct: 329 KEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIR 388
Query: 149 FYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINEM 208
+NIL+ G+ K L+ G L M G+ + TY L+ G+L+ + EM
Sbjct: 389 TFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEM 448
Query: 209 RSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGEL 268
S+ + + Y ++ DNG +KA+ I E+I + + LD IYN II ++
Sbjct: 449 VSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKV 508
Query: 269 VEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITI 328
+A ++F + + ++PD+ T+N +I CK G +++A LF +M+E G P+ + +
Sbjct: 509 DDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNIL 568
Query: 329 ISCLGELGKWDVIK--KNFENMKDRGHGKIGAIYAILVDIYGQYGRFR 374
I LG+ D K K E +K G + ++VD+ GR +
Sbjct: 569 IR--AHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSD-GRLK 613
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 80/193 (41%), Gaps = 36/193 (18%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQ-- 136
+YN IQ C+LG ++ A L +M + P +SY L++ L G +A IF+
Sbjct: 424 TYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483
Query: 137 -----------------------------EMVCF----GFNPKLRFYNILLRGFLKKGLL 163
++ C G P ++ YNI++ G KKG L
Sbjct: 484 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSL 543
Query: 164 GLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINEMRSKGFQLNSFVYGKV 223
L ME+ G N TY IL+ H+ G + +I E++ GF +++ V
Sbjct: 544 SEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMV 603
Query: 224 IGLYRDNGMWKKA 236
+ + D G KK+
Sbjct: 604 VDMLSD-GRLKKS 615
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 113/461 (24%), Positives = 210/461 (45%), Gaps = 8/461 (1%)
Query: 46 RCVKEGYAYSLGNKNLSIKSPDGSNSGEEFSGNSYNKSIQYCCKLGDIDEAMALLAQMQA 105
RC K A+S K + + G E + +++ I C G + EA+ L+ +M
Sbjct: 135 RCRKLCLAFSAMGKIIKL--------GYEPNTITFSTLINGLCLEGRVSEALELVDRMVE 186
Query: 106 LGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKLRFYNILLRGFLKKGLLGL 165
+G P I+ +L+ L G+ EA + +MV +G P Y +L K G L
Sbjct: 187 MGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTAL 246
Query: 166 GSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINEMRSKGFQLNSFVYGKVIG 225
LL ME+ I + Y I++D G LD+ + + NEM KG N Y +IG
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIG 306
Query: 226 LYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQESIRP 285
+ + G W ++ ++ + ++ + ++ +ID+F K G+L EA E+ ++M I P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP 366
Query: 286 DIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNF 345
D +T+ SLI CK + KA ++ M +G P+ + F +I+ + + D + F
Sbjct: 367 DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELF 426
Query: 346 ENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFCILANAYAQQ 405
M RG Y L+ + + G+ +E + + P+ + IL +
Sbjct: 427 RKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDN 486
Query: 406 GLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTY 465
G E+ +++ + +E +E ++ + N++I+ A K +A ++ + G+ P + TY
Sbjct: 487 GESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTY 546
Query: 466 STLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQILQSA 506
+ ++ + + ++++ME G PD IL A
Sbjct: 547 NIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRA 587
Score = 135 bits (341), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 92/414 (22%), Positives = 192/414 (46%)
Query: 94 DEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKLRFYNIL 153
D+A+ L M P+ I ++ L A+A + A+ ++M G L +I+
Sbjct: 70 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129
Query: 154 LRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINEMRSKGF 213
+ F + L L + + +G N T+ L++ GR+ + +++ M G
Sbjct: 130 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 189
Query: 214 QLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGELVEALE 273
+ + ++ +G +A+ +++++ E G + Y +++ K G+ A+E
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 249
Query: 274 VFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLG 333
+ KM++ +I+ D V ++ +I CK G + A LF +M+ +G + + +I
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFC 309
Query: 334 ELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSGS 393
G+WD K +M R +++L+D + + G+ R+ EE + G+ P
Sbjct: 310 NAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTI 369
Query: 394 MFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLM 453
+ L + + ++ ++ +++ LM +G +PN+ N+LIN + A + + L ++ M
Sbjct: 370 TYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM 429
Query: 454 KDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQILQSAL 507
G+ D VTY+TL++ F K + E++++M S P+ +IL L
Sbjct: 430 SLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGL 483
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 174/404 (43%), Gaps = 35/404 (8%)
Query: 88 CKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKL 147
C+ + A + + ++ LG+ P++I++++LI L GR EA + MV G P L
Sbjct: 134 CRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDL 193
Query: 148 RFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINE 207
N L+ G +C +G+ + L+I++
Sbjct: 194 ITINTLVNG---------------------LCL--------------SGKEAEAMLLIDK 218
Query: 208 MRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGE 267
M G Q N+ YG V+ + +G A+ ++ ++ E + LD Y+ IID K+G
Sbjct: 219 MVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGS 278
Query: 268 LVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFIT 327
L A +F +M+ + I +I+T+N LI C AG +L M ++ P+ F
Sbjct: 279 LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV 338
Query: 328 IISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEG 387
+I + GK ++ + M RG Y L+D + + + + + +G
Sbjct: 339 LIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 398
Query: 388 LQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEAL 447
P+ F IL N Y + + +++ + M G+ + V N LI F GK A
Sbjct: 399 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 458
Query: 448 SVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESS 491
++ M + P++VTY L+ + K EI++++E S
Sbjct: 459 ELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKS 502
Score = 102 bits (255), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 130/295 (44%), Gaps = 39/295 (13%)
Query: 89 KLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKLR 148
K G + EA L +M G P +I+Y SLI+ +A+ + MV G +P +R
Sbjct: 345 KEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIR 404
Query: 149 FYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINEM 208
+NIL+ G+ K + G L M G+ + TY L+ G+L+ + EM
Sbjct: 405 TFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEM 464
Query: 209 RSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSII--------- 259
S+ N Y ++ DNG +KA+ I E+I + + LD IYN II
Sbjct: 465 VSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKV 524
Query: 260 ----DTFG----------------------KYGELVEALEVFEKMQQESIRPDIVTWNSL 293
D F K G L EA +F KM+++ PD T+N L
Sbjct: 525 DDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNIL 584
Query: 294 IRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNFENM 348
IR H GD K+++L +++ GF D +I L + G+ +KK+F +M
Sbjct: 585 IRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSD-GR---LKKSFLDM 635
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 107/251 (42%), Gaps = 35/251 (13%)
Query: 258 IIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQG 317
+I+ F + +L A K+ + P+ +T+++LI C G V++ALEL +M E G
Sbjct: 129 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 188
Query: 318 FYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPE 377
PD T+++ L GK A +L+D +YG
Sbjct: 189 HKPDLITINTLVNGLCLSGKE-------------------AEAMLLIDKMVEYG------ 223
Query: 378 ECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAF 437
QP+ + + N + G +++L+ ME I+ + V +++I+
Sbjct: 224 ----------CQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 273
Query: 438 GVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDR 497
G A ++++ M+ GI+ +++TY+ L+ F A ++ ++ + M P+
Sbjct: 274 CKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNV 333
Query: 498 KARQILQSALV 508
+L + V
Sbjct: 334 VTFSVLIDSFV 344
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 82/193 (42%), Gaps = 36/193 (18%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQ-- 136
+YN IQ C+LG ++ A L +M + P+ ++Y L++ L G + +A IF+
Sbjct: 440 TYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI 499
Query: 137 -----------------------------EMVCF----GFNPKLRFYNILLRGFLKKGLL 163
++ C G P ++ YNI++ G KKG L
Sbjct: 500 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPL 559
Query: 164 GLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINEMRSKGFQLNSFVYGKV 223
L ME+ G + TY IL+ H+ G + +I E++ GF +++ V
Sbjct: 560 SEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMV 619
Query: 224 IGLYRDNGMWKKA 236
I + D G KK+
Sbjct: 620 IDMLSD-GRLKKS 631
>sp|Q8S9D1|PP395_ARATH Pentatricopeptide repeat-containing protein At5g21222
OS=Arabidopsis thaliana GN=ATC401 PE=2 SV=1
Length = 831
Score = 157 bits (398), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/410 (25%), Positives = 196/410 (47%), Gaps = 38/410 (9%)
Query: 97 MALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKLRFYNILLRG 156
++L+++++ G P +I + ++I A + G +A IF++M G P +N L++G
Sbjct: 374 LSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKG 433
Query: 157 FLKKGLLGLGSRLL-MVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINEMRSKGFQL 215
+ K G L SRLL M++ D + N T IL+ N ++++ W I+ +M+S
Sbjct: 434 YGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQS----- 488
Query: 216 NSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGELVEALE-V 274
G+ D +N++ + + G A + +
Sbjct: 489 ------------------------------YGVKPDVVTFNTLAKAYARIGSTCTAEDMI 518
Query: 275 FEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGE 334
+M ++P++ T +++ +C+ G + +AL F +M+E G +P+ +F ++I
Sbjct: 519 IPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLN 578
Query: 335 LGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSM 394
+ D + + + M++ G ++ L++ + G + EE + G+ P
Sbjct: 579 INDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHA 638
Query: 395 FCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMK 454
F ILA YA+ G E+ ++L M G+ PN+V+ +I+ + AG+ K+A+ VY M
Sbjct: 639 FSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMC 698
Query: 455 DI-GISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQIL 503
I G+SP+L TY TL+ F AK+ K E+ K ME P RK Q++
Sbjct: 699 GIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLI 748
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 150/331 (45%), Gaps = 10/331 (3%)
Query: 179 CRNQETYEILLDYHVNAGRLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVG 238
C + + L++ + GR + I N + +G + + Y ++ + +
Sbjct: 316 CGDVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLS 375
Query: 239 IVEEIREMGLSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHC 298
++ ++ + GL D ++N+II+ + G L +A+++FEKM++ +P T+N+LI+ +
Sbjct: 376 LISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYG 435
Query: 299 KAGDVAKALELFTQM-QEQGFYPDPKIFITIISCLGELGK----WDVIKKNFENMKDRGH 353
K G + ++ L M +++ P+ + ++ K W+++ K M+ G
Sbjct: 436 KIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYK----MQSYGV 491
Query: 354 GKIGAIYAILVDIYGQYGRFRDPEECIAALKLEG-LQPSGSMFCILANAYAQQGLCEQTV 412
+ L Y + G E+ I L ++P+ + N Y ++G E+ +
Sbjct: 492 KPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEAL 551
Query: 413 KVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAF 472
+ M+ G+ PNL + N LI F V LM++ G+ PD+VT+STLM A+
Sbjct: 552 RFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAW 611
Query: 473 IRAKKFHKVPEIYKQMESSGCTPDRKARQIL 503
+ EIY M G PD A IL
Sbjct: 612 SSVGDMKRCEEIYTDMLEGGIDPDIHAFSIL 642
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 124/253 (49%), Gaps = 2/253 (0%)
Query: 84 IQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEA-DAIFQEMVCFG 142
+Q C I+EA ++ +MQ+ G P +++ +L +A A +G T A D I M+
Sbjct: 467 VQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNK 526
Query: 143 FNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTW 202
P +R ++ G+ ++G + R M+++G+ N + L+ +N +D
Sbjct: 527 VKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVG 586
Query: 203 LIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTF 262
+++ M G + + + ++ + G K+ I ++ E G+ D ++ + +
Sbjct: 587 EVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGY 646
Query: 263 GKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQE-QGFYPD 321
+ GE +A ++ +M++ +RP++V + +I C AG++ KA++++ +M G P+
Sbjct: 647 ARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPN 706
Query: 322 PKIFITIISCLGE 334
+ T+I GE
Sbjct: 707 LTTYETLIWGFGE 719
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/382 (20%), Positives = 167/382 (43%), Gaps = 45/382 (11%)
Query: 80 YNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMV 139
+N I + G++D+AM + +M+ G P++ ++ +LI+ +G+ E+ + M+
Sbjct: 392 FNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMML 451
Query: 140 CFG-FNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
P R NIL++ + + + ++ M+ G+ + T+ L + G
Sbjct: 452 RDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGST 511
Query: 199 ---DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIY 255
+D +II M + N G ++ Y + G ++A+ ++E+G+ + ++
Sbjct: 512 CTAED--MIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVF 569
Query: 256 NSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQE 315
NS+I F ++ EV + M++ ++PD+VT+++L+ GD+ + E++T M E
Sbjct: 570 NSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLE 629
Query: 316 QGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRD 375
G PD F +IL Y + G
Sbjct: 630 GGIDPDIHAF-----------------------------------SILAKGYARAGEPEK 654
Query: 376 PEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLM-EPEGIEPNLVMLNVLI 434
E+ + ++ G++P+ ++ + + + G ++ ++V + M G+ PNL LI
Sbjct: 655 AEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLI 714
Query: 435 NAFGVAGKYKEALSVYHLMKDI 456
FG A K+ L+KD+
Sbjct: 715 WGFGEA---KQPWKAEELLKDM 733
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 97/199 (48%), Gaps = 1/199 (0%)
Query: 88 CKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKL 147
C+ G ++EA+ +M+ LG HP+ + SLI+ ++ + M FG P +
Sbjct: 542 CEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDV 601
Query: 148 RFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINE 207
++ L+ + G + + M + GI + + IL + AG + I+N+
Sbjct: 602 VTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQ 661
Query: 208 MRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREM-GLSLDRQIYNSIIDTFGKYG 266
MR G + N +Y ++I + G KKA+ + +++ + GLS + Y ++I FG+
Sbjct: 662 MRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAK 721
Query: 267 ELVEALEVFEKMQQESIRP 285
+ +A E+ + M+ +++ P
Sbjct: 722 QPWKAEELLKDMEGKNVVP 740
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 190/423 (44%), Gaps = 35/423 (8%)
Query: 84 IQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGF 143
I+ CC+ G+I+++ LL ++ GF P+ + Y +LI+ G +A +F EM G
Sbjct: 170 IKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGL 229
Query: 144 NPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWL 203
R Y +L+ G K G+ G + M++ G+ N TY +++ GR D +
Sbjct: 230 VANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQ 289
Query: 204 IINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFG 263
+ +EMR +G N Y +IG +A +V++++ G++ + YN++ID F
Sbjct: 290 VFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFC 349
Query: 264 KYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPK 323
G+L +AL + ++ + P +VT+N L+ C+ GD + A ++ +M+E+G P
Sbjct: 350 GVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSK- 408
Query: 324 IFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAAL 383
Y IL+D + + + ++
Sbjct: 409 ----------------------------------VTYTILIDTFARSDNMEKAIQLRLSM 434
Query: 384 KLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKY 443
+ GL P + +L + + +G + ++ + M + EPN V+ N +I + G
Sbjct: 435 EELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSS 494
Query: 444 KEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQIL 503
AL + M++ ++P++ +Y +++ + +K + + ++M SG P ++
Sbjct: 495 YRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
Query: 504 QSA 506
A
Sbjct: 555 SRA 557
Score = 126 bits (316), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 167/358 (46%), Gaps = 1/358 (0%)
Query: 146 KLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLII 205
K R Y +++ +++ L L M D G + LL + V + + W
Sbjct: 93 KFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFF 152
Query: 206 NEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKY 265
NE +SK L+ + +G +I + G +K+ ++ E+ E G S + IY ++ID K
Sbjct: 153 NENKSK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKK 211
Query: 266 GELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIF 325
GE+ +A ++F +M + + + T+ LI K G + E++ +MQE G +P+ +
Sbjct: 212 GEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTY 271
Query: 326 ITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKL 385
+++ L + G+ + F+ M++RG Y L+ + + + + + +K
Sbjct: 272 NCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKS 331
Query: 386 EGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKE 445
+G+ P+ + L + + G + + + + ++ G+ P+LV N+L++ F G
Sbjct: 332 DGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSG 391
Query: 446 ALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQIL 503
A + M++ GI P VTY+ L+ F R+ K ++ ME G PD +L
Sbjct: 392 AAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVL 449
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 176/395 (44%), Gaps = 41/395 (10%)
Query: 80 YNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMV 139
Y I CCK G+I++A L +M LG + +Y LI L G + ++++M
Sbjct: 201 YTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQ 260
Query: 140 CFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLD 199
G P L YN ++ +C++ GR
Sbjct: 261 EDGVFPNLYTYNCVMN---------------------QLCKD--------------GRTK 285
Query: 200 DTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSII 259
D + + +EMR +G N Y +IG +A +V++++ G++ + YN++I
Sbjct: 286 DAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLI 345
Query: 260 DTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFY 319
D F G+L +AL + ++ + P +VT+N L+ C+ GD + A ++ +M+E+G
Sbjct: 346 DGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIK 405
Query: 320 PDPKIFITIISCLGELGKWDVIKKNFE---NMKDRGHGKIGAIYAILVDIYGQYGRFRDP 376
P K+ TI+ + + D ++K + +M++ G Y++L+ + G+ +
Sbjct: 406 PS-KVTYTIL--IDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEA 462
Query: 377 EECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINA 436
++ + +P+ ++ + Y ++G + +K+L+ ME + + PN+ +I
Sbjct: 463 SRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEV 522
Query: 437 FGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKA 471
K KEA + M D GI P S + +A
Sbjct: 523 LCKERKSKEAERLVEKMIDSGIDPSTSILSLISRA 557
Score = 112 bits (279), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 136/285 (47%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+YN + CK G +A + +M+ G + ++Y +LI L + EA+ + +M
Sbjct: 270 TYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM 329
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
G NP L YN L+ GF G LG L ++ G+ + TY IL+ G
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDT 389
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSI 258
++ EM +G + + Y +I + + +KA+ + + E+GL D Y+ +
Sbjct: 390 SGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVL 449
Query: 259 IDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGF 318
I F G++ EA +F+ M +++ P+ V +N++I +CK G +AL+L +M+E+
Sbjct: 450 IHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKEL 509
Query: 319 YPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAIL 363
P+ + +I L + K ++ E M D G +I +++
Sbjct: 510 APNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
Score = 90.1 bits (222), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 107/227 (47%), Gaps = 10/227 (4%)
Query: 286 DIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNF 345
D+ ++ LI+ C+AG++ K+ +L ++ E GF P+ I+ T+I + G+ + K F
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 346 ENMKDRGHGKIGAI-----YAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFCILAN 400
M GK+G + Y +L++ + G + E ++ +G+ P+ + + N
Sbjct: 222 FEM-----GKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMN 276
Query: 401 AYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISP 460
+ G + +V M G+ N+V N LI K EA V MK GI+P
Sbjct: 277 QLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINP 336
Query: 461 DLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQILQSAL 507
+L+TY+TL+ F K K + + ++S G +P IL S
Sbjct: 337 NLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGF 383
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/440 (25%), Positives = 202/440 (45%), Gaps = 8/440 (1%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
++N I CK I+EA ++ +M GF P I+Y L+ L +GR A +F +
Sbjct: 289 TFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI 348
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVM-EDMGICRNQETYEILLDYHVNAGR 197
P++ +N L+ GF+ G L +L M GI + TY L+ + G
Sbjct: 349 P----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGL 404
Query: 198 LDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNS 257
+ ++++MR+KG + N + Y ++ + G +A ++ E+ GL + +N
Sbjct: 405 VGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNC 464
Query: 258 IIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQG 317
+I F K + EA+E+F +M ++ +PD+ T+NSLI C+ ++ AL L M +G
Sbjct: 465 LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG 524
Query: 318 FYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPE 377
+ + T+I+ G+ +K M +G Y L+ + G
Sbjct: 525 VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKAR 584
Query: 378 ECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAF 437
+ +G PS IL N + G+ E+ V+ + M G P++V N LIN
Sbjct: 585 SLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGL 644
Query: 438 GVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDR 497
AG+ ++ L+++ ++ GI PD VT++TLM + + + + G P+
Sbjct: 645 CRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNH 704
Query: 498 KARQILQSALV---VLEQRR 514
+ IL +++ L++RR
Sbjct: 705 RTWSILLQSIIPQETLDRRR 724
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/452 (23%), Positives = 198/452 (43%), Gaps = 32/452 (7%)
Query: 88 CKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKL 147
C + +ID A++LL M G P+S+ Y +LI +L+ R EA + +EM G P
Sbjct: 228 CAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDA 287
Query: 148 RFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETY---------------------- 185
+N ++ G K + ++++ M G + TY
Sbjct: 288 ETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYR 347
Query: 186 ---------EILLDYHVNAGRLDDTWLIINEM-RSKGFQLNSFVYGKVIGLYRDNGMWKK 235
L+ V GRLDD ++++M S G + Y +I Y G+
Sbjct: 348 IPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGL 407
Query: 236 AVGIVEEIREMGLSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIR 295
A+ ++ ++R G + Y ++D F K G++ EA V +M + ++P+ V +N LI
Sbjct: 408 ALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLIS 467
Query: 296 WHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGK 355
CK + +A+E+F +M +G PD F ++IS L E+ + +M G
Sbjct: 468 AFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVA 527
Query: 356 IGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVL 415
Y L++ + + G ++ + + + +G + L + G ++ +
Sbjct: 528 NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLF 587
Query: 416 QLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRA 475
+ M +G P+ + N+LIN +G +EA+ M G +PD+VT+++L+ RA
Sbjct: 588 EKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRA 647
Query: 476 KKFHKVPEIYKQMESSGCTPDRKARQILQSAL 507
+ +++++++ G PD L S L
Sbjct: 648 GRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWL 679
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/408 (23%), Positives = 188/408 (46%), Gaps = 6/408 (1%)
Query: 107 GFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKLRFYNILLRGFLKKGLLGLG 166
G+ S Y LI L + G D + +M G K + ++R + K G G
Sbjct: 106 GYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQT 165
Query: 167 SRLLMVMEDMGICRNQ-ETYEILLDYHVNAGRLDDTWLIINEMRSKGFQLNSFVYGKVIG 225
+RL++ M ++ C ++Y ++L+ V+ + +M S+ F +G V+
Sbjct: 166 TRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMK 225
Query: 226 LYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQESIRP 285
+ A+ ++ ++ + G + IY ++I + K + EAL++ E+M P
Sbjct: 226 AFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVP 285
Query: 286 DIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNF 345
D T+N +I CK + +A ++ +M +GF PD + +++ L ++G+ D K F
Sbjct: 286 DAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF 345
Query: 346 ENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLE-GLQPSGSMFCILANAYAQ 404
+ I+ L+ + +GR D + ++ + G+ P + L Y +
Sbjct: 346 YRIPKPEI----VIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWK 401
Query: 405 QGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVT 464
+GL ++VL M +G +PN+ +L++ F GK EA +V + M G+ P+ V
Sbjct: 402 EGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVG 461
Query: 465 YSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQILQSALVVLEQ 512
++ L+ AF + + + EI+++M GC PD L S L +++
Sbjct: 462 FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDE 509
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 134/271 (49%), Gaps = 2/271 (0%)
Query: 67 DGSNSGEEFSGNSYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVG 126
D N G + + SY + CKLG IDEA +L +M A G P+++ + LI A
Sbjct: 414 DMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEH 473
Query: 127 RTLEADAIFQEMVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYE 186
R EA IF+EM G P + +N L+ G + + LL M G+ N TY
Sbjct: 474 RIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYN 533
Query: 187 ILLDYHVNAGRLDDTWLIINEMRSKGFQLNSFVYGKVI-GLYRDNGMWKKAVGIVEEIRE 245
L++ + G + + ++NEM +G L+ Y +I GL R G KA + E++
Sbjct: 534 TLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCR-AGEVDKARSLFEKMLR 592
Query: 246 MGLSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAK 305
G + N +I+ + G + EA+E ++M PDIVT+NSLI C+AG +
Sbjct: 593 DGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIED 652
Query: 306 ALELFTQMQEQGFYPDPKIFITIISCLGELG 336
L +F ++Q +G PD F T++S L + G
Sbjct: 653 GLTMFRKLQAEGIPPDTVTFNTLMSWLCKGG 683
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/405 (23%), Positives = 176/405 (43%), Gaps = 46/405 (11%)
Query: 96 AMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKLRFYNILLR 155
A + M + P+ ++ +++A +V A ++ ++M G P Y L+
Sbjct: 201 AANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIH 260
Query: 156 GFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINEMRSKGFQL 215
K + +LL M MG + ET+ ++ R+++ ++N M +GF
Sbjct: 261 SLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAP 320
Query: 216 NSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQ---IYNSIIDTFGKYGELVEAL 272
+ YG Y NG+ K +G V+ +++ + + I+N++I F +G L +A
Sbjct: 321 DDITYG-----YLMNGLCK--IGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAK 373
Query: 273 EVFEKMQQE-SIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISC 331
V M I PD+ T+NSLI + K G V ALE+ M+ +G P+ + S
Sbjct: 374 AVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPN------VYS- 426
Query: 332 LGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPS 391
Y ILVD + + G+ + + + +GL+P+
Sbjct: 427 ----------------------------YTILVDGFCKLGKIDEAYNVLNEMSADGLKPN 458
Query: 392 GSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYH 451
F L +A+ ++ + V++ + M +G +P++ N LI+ + K AL +
Sbjct: 459 TVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLR 518
Query: 452 LMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPD 496
M G+ + VTY+TL+ AF+R + + ++ +M G D
Sbjct: 519 DMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLD 563
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 54/128 (42%)
Query: 72 GEEFSGNSYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEA 131
G S S N I C+ G ++EA+ +M G P +++ SLI L GR +
Sbjct: 594 GHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDG 653
Query: 132 DAIFQEMVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDY 191
+F+++ G P +N L+ K G + LL + G N T+ ILL
Sbjct: 654 LTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQS 713
Query: 192 HVNAGRLD 199
+ LD
Sbjct: 714 IIPQETLD 721
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 157 bits (396), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/461 (24%), Positives = 207/461 (44%), Gaps = 8/461 (1%)
Query: 46 RCVKEGYAYSLGNKNLSIKSPDGSNSGEEFSGNSYNKSIQYCCKLGDIDEAMALLAQMQA 105
RC K YA+S K + + G E +N + C + EA+ L+ +M
Sbjct: 135 RCRKLSYAFSTMGKIMKL--------GYEPDTVIFNTLLNGLCLECRVSEALELVDRMVE 186
Query: 106 LGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKLRFYNILLRGFLKKGLLGL 165
+G P+ I+ +L+ L G+ +A + MV GF P Y +L K G L
Sbjct: 187 MGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTAL 246
Query: 166 GSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINEMRSKGFQLNSFVYGKVIG 225
LL ME+ I + Y I++D G LD+ + + NEM KGF+ + Y +IG
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306
Query: 226 LYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQESIRP 285
+ + G W ++ ++ + +S + ++ +ID+F K G+L EA ++ ++M Q I P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366
Query: 286 DIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNF 345
+ +T+NSLI CK + +A+++ M +G PD F +I+ + + D + F
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELF 426
Query: 346 ENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFCILANAYAQQ 405
M RG Y LV + Q G+ ++ + ++P + IL +
Sbjct: 427 REMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDN 486
Query: 406 GLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTY 465
G E+ +++ +E +E ++ + ++I+ A K +A ++ + G+ D Y
Sbjct: 487 GELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAY 546
Query: 466 STLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQILQSA 506
+ ++ R K ++++M G PD IL A
Sbjct: 547 NIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRA 587
Score = 143 bits (360), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 97/428 (22%), Positives = 193/428 (45%), Gaps = 35/428 (8%)
Query: 80 YNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMV 139
+N+ K + +AL QM++ G S + + +I + A + +++
Sbjct: 91 FNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIM 150
Query: 140 CFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLD 199
G+ P +N LL G + CR E E L+D V G
Sbjct: 151 KLGYEPDTVIFNTLLNGLCLE------------------CRVSEALE-LVDRMVEMGH-- 189
Query: 200 DTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSII 259
+ LN+ V G + NG AV +++ + E G + Y ++
Sbjct: 190 ---------KPTLITLNTLVNGLCL-----NGKVSDAVVLIDRMVETGFQPNEVTYGPVL 235
Query: 260 DTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFY 319
+ K G+ A+E+ KM++ +I+ D V ++ +I CK G + A LF +M+ +GF
Sbjct: 236 NVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFK 295
Query: 320 PDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEEC 379
D + T+I G+WD K +M R +++L+D + + G+ R+ ++
Sbjct: 296 ADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQL 355
Query: 380 IAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGV 439
+ + G+ P+ + L + + ++ E+ ++++ LM +G +P+++ N+LIN +
Sbjct: 356 LKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCK 415
Query: 440 AGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKA 499
A + + L ++ M G+ + VTY+TL++ F ++ K +++++M S PD +
Sbjct: 416 ANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVS 475
Query: 500 RQILQSAL 507
+IL L
Sbjct: 476 YKILLDGL 483
Score = 99.4 bits (246), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 122/286 (42%), Gaps = 37/286 (12%)
Query: 89 KLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKLR 148
K G + EA LL +M G P++I+Y SLI+ R EA + M+ G +P +
Sbjct: 345 KEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIM 404
Query: 149 FYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINEM 208
+NIL+ G+ K + G L M G+ N TY L+ +G+L+ + EM
Sbjct: 405 TFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEM 464
Query: 209 RSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIRE----------------------- 245
S+ + + Y ++ DNG +KA+ I +I +
Sbjct: 465 VSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKV 524
Query: 246 ------------MGLSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSL 293
G+ LD + YN +I + L +A +F KM +E PD +T+N L
Sbjct: 525 DDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNIL 584
Query: 294 IRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCL--GELGK 337
IR H D A EL +M+ GF D +I+ L GEL K
Sbjct: 585 IRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGELDK 630
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 110/254 (43%)
Query: 255 YNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQ 314
+N + K + L + ++M+ + I I T + +I C+ ++ A ++
Sbjct: 91 FNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIM 150
Query: 315 EQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFR 374
+ G+ PD IF T+++ L + + + M + GH LV+ G+
Sbjct: 151 KLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVS 210
Query: 375 DPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLI 434
D I + G QP+ + + N + G +++L+ ME I+ + V +++I
Sbjct: 211 DAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 435 NAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCT 494
+ G A ++++ M+ G D++TY+TL+ F A ++ ++ + M +
Sbjct: 271 DGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKIS 330
Query: 495 PDRKARQILQSALV 508
P+ +L + V
Sbjct: 331 PNVVTFSVLIDSFV 344
Score = 40.8 bits (94), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/166 (20%), Positives = 67/166 (40%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
SY + C G++++A+ + +++ Y +I + + + +A +F +
Sbjct: 475 SYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSL 534
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
G R YNI++ +K L L M + G ++ TY IL+ H+
Sbjct: 535 PLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDA 594
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIR 244
+I EM+S GF + VI + + K + ++ R
Sbjct: 595 TTAAELIEEMKSSGFPADVSTVKMVINMLSSGELDKSFLDMLSTTR 640
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 156 bits (395), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 99/423 (23%), Positives = 205/423 (48%), Gaps = 5/423 (1%)
Query: 89 KLGDI---DEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNP 145
+L DI D+A+ L M PS + + L+ A+A + + ++ ++M G +
Sbjct: 57 RLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISH 116
Query: 146 KLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLII 205
L Y+I + F ++ L L +L M +G + T LL+ + ++ R+ D ++
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 206 NEMRSKGFQLNSFVYGKVI-GLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGK 264
++M G++ ++F + +I GL+ N +AV +V+++ + G D Y ++++ K
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKA-SEAVALVDQMVQRGCQPDLVTYGTVVNGLCK 235
Query: 265 YGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKI 324
G++ AL + KM+ I+ ++V +N++I CK V A++LFT+M+ +G P+
Sbjct: 236 RGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVT 295
Query: 325 FITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALK 384
+ ++I+CL G+W + NM ++ + L+D + + G+ + E+ +
Sbjct: 296 YNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMI 355
Query: 385 LEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYK 444
+ P + +L N + ++ ++ + M + PN+ N LIN F + +
Sbjct: 356 QRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVE 415
Query: 445 EALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQILQ 504
+ + ++ M G+ + VTY+T+++ F +A ++KQM S+ D IL
Sbjct: 416 DGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILL 475
Query: 505 SAL 507
L
Sbjct: 476 HGL 478
Score = 145 bits (367), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 117/457 (25%), Positives = 197/457 (43%), Gaps = 42/457 (9%)
Query: 88 CKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKL 147
C I +A+AL+ QM +G+ P + ++ +LI L + EA A+ +MV G P L
Sbjct: 164 CHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDL 223
Query: 148 RFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINE 207
Y ++ G K+G + L LL ME I N + ++D ++ + E
Sbjct: 224 VTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTE 283
Query: 208 MRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGE 267
M +KG + N Y +I + G W A ++ + E ++ + +N++ID F K G+
Sbjct: 284 METKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGK 343
Query: 268 LVEALEVFEKMQQESIRPDIVTWN-----------------------------------S 292
LVEA ++ E+M Q SI PD +T+N +
Sbjct: 344 LVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNT 403
Query: 293 LIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRG 352
LI CK V +ELF +M ++G + + TII + G D + F+ M
Sbjct: 404 LINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNR 463
Query: 353 HGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFCILANAYAQQGLCE--Q 410
Y+IL+ YG+ A + + LQ S I +G+C+ +
Sbjct: 464 VPTDIMTYSILLHGLCSYGKLD-----TALVIFKYLQKSEMELNIFIYNTMIEGMCKAGK 518
Query: 411 TVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMK 470
+ L I+P++V N +I+ +EA ++ MK+ G P+ TY+TL++
Sbjct: 519 VGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIR 578
Query: 471 AFIRAKKFHKVPEIYKQMESSGCTPDRKARQILQSAL 507
A +R E+ K+M SSG D ++ + L
Sbjct: 579 ANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNML 615
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/454 (23%), Positives = 203/454 (44%), Gaps = 40/454 (8%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLI----------EALASVGRT 128
+Y+ I C+ + A+A+LA+M LG+ P ++ +SL+ +A+A V +
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 179
Query: 129 L-------------------------EADAIFQEMVCFGFNPKLRFYNILLRGFLKKGLL 163
+ EA A+ +MV G P L Y ++ G K+G +
Sbjct: 180 VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239
Query: 164 GLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINEMRSKGFQLNSFVYGKV 223
L LL ME I N + ++D ++ + EM +KG + N Y +
Sbjct: 240 DLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSL 299
Query: 224 IGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQESI 283
I + G W A ++ + E ++ + +N++ID F K G+LVEA ++ E+M Q SI
Sbjct: 300 INCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSI 359
Query: 284 RPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKK 343
PD +T+N LI C + +A ++F M + P+ + + T+I+ + + + +
Sbjct: 360 DPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVE 419
Query: 344 NFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSM-FCILANAY 402
F M RG Y ++ + Q G D + + + P+ M + IL +
Sbjct: 420 LFREMSQRGLVGNTVTYTTIIQGFFQAGDC-DSAQMVFKQMVSNRVPTDIMTYSILLHGL 478
Query: 403 AQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDL 462
G + + + + ++ +E N+ + N +I AGK EA + L + I PD+
Sbjct: 479 CSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEA---WDLFCSLSIKPDV 535
Query: 463 VTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPD 496
VTY+T++ + + +++++M+ G P+
Sbjct: 536 VTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPN 569
Score = 132 bits (332), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 179/387 (46%), Gaps = 1/387 (0%)
Query: 107 GFHPSSISYASLIE-ALASVGRTLEADAIFQEMVCFGFNPKLRFYNILLRGFLKKGLLGL 165
F +S Y ++ L+ + + +A +F +MV P + +N LL K L
Sbjct: 42 SFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFEL 101
Query: 166 GSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINEMRSKGFQLNSFVYGKVIG 225
L M+ +GI + TY I ++ +L ++ +M G++ + ++
Sbjct: 102 VISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLN 161
Query: 226 LYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQESIRP 285
Y + AV +V+++ EMG D + ++I + + EA+ + ++M Q +P
Sbjct: 162 GYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQP 221
Query: 286 DIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNF 345
D+VT+ +++ CK GD+ AL L +M+ + IF TII L + +V F
Sbjct: 222 DLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLF 281
Query: 346 ENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFCILANAYAQQ 405
M+ +G Y L++ YGR+ D ++ + + + P+ F L +A+ ++
Sbjct: 282 TEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKE 341
Query: 406 GLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTY 465
G + K+ + M I+P+ + N+LIN F + + EA ++ M P++ TY
Sbjct: 342 GKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTY 401
Query: 466 STLMKAFIRAKKFHKVPEIYKQMESSG 492
+TL+ F + K+ E++++M G
Sbjct: 402 NTLINGFCKCKRVEDGVELFREMSQRG 428
Score = 129 bits (325), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/417 (23%), Positives = 184/417 (44%), Gaps = 10/417 (2%)
Query: 80 YNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMV 139
+NK + K+ + ++L QMQ LG +Y+ I + A A+ +M+
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 140 CFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLD 199
G+ P + + LL G+ + L+ M +MG + T+ L+ +
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205
Query: 200 DTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKK-----AVGIVEEIREMGLSLDRQI 254
+ ++++M +G Q + YG V+ NG+ K+ A+ ++ ++ + + I
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVV-----NGLCKRGDIDLALNLLNKMEAARIKANVVI 260
Query: 255 YNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQ 314
+N+IID+ KY + A+++F +M+ + IRP++VT+NSLI C G + A L + M
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 315 EQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFR 374
E+ P+ F +I + GK +K E M R Y +L++ + + R
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLD 380
Query: 375 DPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLI 434
+ ++ + + P+ + L N + + E V++ + M G+ N V +I
Sbjct: 381 EAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTII 440
Query: 435 NAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESS 491
F AG A V+ M + D++TYS L+ K I+K ++ S
Sbjct: 441 QGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKS 497
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 140/314 (44%), Gaps = 8/314 (2%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+YN I C G +A LL+ M +P+ +++ +LI+A G+ +EA+ + +EM
Sbjct: 295 TYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEM 354
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
+ +P YN+L+ GF L ++ M N +TY L++ R+
Sbjct: 355 IQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRV 414
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSI 258
+D + EM +G N+ Y +I + G A + +++ + D Y+ +
Sbjct: 415 EDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSIL 474
Query: 259 IDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGF 318
+ YG+L AL +F+ +Q+ + +I +N++I CKAG V +A +LF + +
Sbjct: 475 LHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK-- 532
Query: 319 YPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEE 378
PD + T+IS L F MK+ G Y L+ RD +
Sbjct: 533 -PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLI-----RANLRDCDR 586
Query: 379 CIAALKLEGLQPSG 392
+A ++ ++ SG
Sbjct: 587 AASAELIKEMRSSG 600
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 124/274 (45%), Gaps = 15/274 (5%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+YN I C +DEA + M + P+ +Y +LI R + +F+EM
Sbjct: 365 TYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREM 424
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
G Y +++GF + G + M + + TY ILL + G+L
Sbjct: 425 SQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKL 484
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSL----DRQI 254
D +I ++ +LN F+Y +I GM K G V E ++ SL D
Sbjct: 485 DTALVIFKYLQKSEMELNIFIYNTMI-----EGMCK--AGKVGEAWDLFCSLSIKPDVVT 537
Query: 255 YNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQ 314
YN++I L EA ++F KM+++ P+ T+N+LIR + + D A + EL +M+
Sbjct: 538 YNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMR 597
Query: 315 EQGFYPDPKIFITIISCLGELGKWDVIKKNFENM 348
GF D I++++ + G+ D K+F NM
Sbjct: 598 SSGFVGDAST-ISLVTNMLHDGRLD---KSFLNM 627
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 156 bits (394), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 109/429 (25%), Positives = 184/429 (42%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+YN + + CK G A+ LL M++ G +Y LI L R + + ++M
Sbjct: 230 TYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM 289
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
+P YN L+ GF +G + + S+LL M G+ N T+ L+D H++ G
Sbjct: 290 RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNF 349
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSI 258
+ + M +KG + YG ++ N + A G ++ G+ + R Y +
Sbjct: 350 KEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 409
Query: 259 IDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGF 318
ID K G L EA+ + +M ++ I PDIVT+++LI CK G A E+ ++ G
Sbjct: 410 IDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL 469
Query: 319 YPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEE 378
P+ I+ T+I +G + +E M GH + + +LV + G+ + EE
Sbjct: 470 SPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEE 529
Query: 379 CIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFG 438
+ + +G+ P+ F L N Y G + V M G P L+
Sbjct: 530 FMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLC 589
Query: 439 VAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRK 498
G +EA + + + D V Y+TL+ A ++ K ++ +M PD
Sbjct: 590 KGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSY 649
Query: 499 ARQILQSAL 507
L S L
Sbjct: 650 TYTSLISGL 658
Score = 146 bits (369), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 124/461 (26%), Positives = 199/461 (43%), Gaps = 36/461 (7%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+YN I G + A LL +M + G P+ +++ +LI+ S G EA +F M
Sbjct: 300 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMM 359
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
G P Y +LL G K L M M+ G+C + TY ++D G L
Sbjct: 360 EAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFL 419
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSI 258
D+ +++NEM G + Y +I + G +K A IV I +GLS + IY+++
Sbjct: 420 DEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTL 479
Query: 259 IDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGF 318
I + G L EA+ ++E M E D T+N L+ CKAG VA+A E M G
Sbjct: 480 IYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 539
Query: 319 YPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEE 378
P+ F +I+ G G+ F+ M GH Y L+ + G R+ E+
Sbjct: 540 LPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEK 599
Query: 379 CIAALK--------------LEGLQPSG------SMF------CILANAYAQ----QGLC 408
+ +L L + SG S+F IL ++Y GLC
Sbjct: 600 FLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLC 659
Query: 409 EQTVKVLQLM-----EPEG-IEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDL 462
+ V+ ++ E G + PN VM ++ AG++K + M ++G +PD+
Sbjct: 660 RKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDI 719
Query: 463 VTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQIL 503
VT + ++ + R K K ++ +M + P+ IL
Sbjct: 720 VTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNIL 760
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/470 (22%), Positives = 194/470 (41%), Gaps = 42/470 (8%)
Query: 80 YNKSIQYC-------CKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEAD 132
+N S+ C K G+ + L +M P ++ LI L + G ++
Sbjct: 154 FNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSS 213
Query: 133 AIFQEMVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYH 192
+ Q+M G+ P + YN +L + KKG LL M+ G+ + TY +L+
Sbjct: 214 YLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDL 273
Query: 193 VNAGRLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDR 252
+ R+ +L++ +MR + N Y +I + + G A ++ E+ GLS +
Sbjct: 274 CRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNH 333
Query: 253 QIYNSIIDTFGKYGELVEALEVFEKMQQESIRPDIV------------------------ 288
+N++ID G EAL++F M+ + + P V
Sbjct: 334 VTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMR 393
Query: 289 -----------TWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGK 337
T+ +I CK G + +A+ L +M + G PD + +I+ ++G+
Sbjct: 394 MKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGR 453
Query: 338 WDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFCI 397
+ K+ + G G IY+ L+ + G ++ A+ LEG F +
Sbjct: 454 FKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNV 513
Query: 398 LANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIG 457
L + + G + + ++ M +GI PN V + LIN +G +G+ +A SV+ M +G
Sbjct: 514 LVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVG 573
Query: 458 ISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQILQSAL 507
P TY +L+K + + + K + + D L +A+
Sbjct: 574 HHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAM 623
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/456 (21%), Positives = 194/456 (42%), Gaps = 36/456 (7%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+Y+ I CK+G A ++ ++ +G P+ I Y++LI +G EA I++ M
Sbjct: 440 TYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAM 499
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
+ G +N+L+ K G + + M GI N +++ L++ + N+G
Sbjct: 500 ILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEG 559
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSI 258
+ + +EM G F YG ++ G ++A ++ + + ++D +YN++
Sbjct: 560 LKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTL 619
Query: 259 IDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQG- 317
+ K G L +A+ +F +M Q SI PD T+ SLI C+ G A+ + + +G
Sbjct: 620 LTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGN 679
Query: 318 FYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPE 377
P+ ++ + + + G+W E M + GH ++D Y + G+
Sbjct: 680 VLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTN 739
Query: 378 ECIAALKLEGLQPSGSMFCILANAYAQQ------------------------------GL 407
+ + + + P+ + + IL + Y+++ G+
Sbjct: 740 DLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGI 799
Query: 408 CEQT-----VKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDL 462
CE +K+L+ G+E + N+LI+ G+ A + +M +GIS D
Sbjct: 800 CESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDK 859
Query: 463 VTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRK 498
T ++ R +F + + +M G +P+ +
Sbjct: 860 DTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESR 895
Score = 129 bits (325), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/429 (22%), Positives = 193/429 (44%), Gaps = 37/429 (8%)
Query: 80 YNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMV 139
Y+ I+ + G I +++ + M GF+PS + +++ ++ G + + +EM+
Sbjct: 126 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 185
Query: 140 CFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLD 199
P + +NIL+ +G S L+ ME G TY +L ++ GR
Sbjct: 186 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 245
Query: 200 DTWLIINEMRSKGFQLNSFVYGKVI-GLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSI 258
+++ M+SKG + Y +I L R N + K + ++ ++R+ + + YN++
Sbjct: 246 AAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYL-LLRDMRKRMIHPNEVTYNTL 304
Query: 259 IDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGF 318
I+ F G+++ A ++ +M + P+ VT+N+LI H G+ +AL++F M+ +G
Sbjct: 305 INGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGL 364
Query: 319 YPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEE 378
P + ++ L + ++D+ + G Y R +
Sbjct: 365 TPSEVSYGVLLDGLCKNAEFDLAR-------------------------GFYMRMKRNGV 399
Query: 379 CIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFG 438
C+ + G + + + G ++ V +L M +GI+P++V + LIN F
Sbjct: 400 CVGRITYTG----------MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFC 449
Query: 439 VAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRK 498
G++K A + + +G+SP+ + YSTL+ R + IY+ M G T D
Sbjct: 450 KVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHF 509
Query: 499 ARQILQSAL 507
+L ++L
Sbjct: 510 TFNVLVTSL 518
Score = 108 bits (271), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 160/353 (45%), Gaps = 2/353 (0%)
Query: 144 NPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWL 203
NP + Y+IL+R +L++G++ + +M G + T +L V +G W
Sbjct: 122 NPSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWS 179
Query: 204 IINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFG 263
+ EM + + + +I + G ++K+ +++++ + G + YN+++ +
Sbjct: 180 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 239
Query: 264 KYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPK 323
K G A+E+ + M+ + + D+ T+N LI C++ +AK L M+++ +P+
Sbjct: 240 KKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 299
Query: 324 IFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAAL 383
+ T+I+ GK + + M G + L+D + G F++ + +
Sbjct: 300 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMM 359
Query: 384 KLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKY 443
+ +GL PS + +L + + + M+ G+ + +I+ G
Sbjct: 360 EAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFL 419
Query: 444 KEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPD 496
EA+ + + M GI PD+VTYS L+ F + +F EI ++ G +P+
Sbjct: 420 DEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPN 472
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 98/500 (19%), Positives = 191/500 (38%), Gaps = 71/500 (14%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
++N + CK G + EA + M + G P+++S+ LI + G L+A ++F EM
Sbjct: 510 TFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEM 569
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
G +P Y LL+G K G L + L + + + Y LL +G L
Sbjct: 570 TKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNL 629
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVI-GLYRDN--------------------------- 230
+ EM + +S+ Y +I GL R
Sbjct: 630 AKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTC 689
Query: 231 --------GMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQES 282
G WK + E++ +G + D N++ID + + G++ + ++ +M ++
Sbjct: 690 FVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQN 749
Query: 283 IRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIK 342
P++ T+N L+ + K DV+ + L+ + G PD +++ + E ++
Sbjct: 750 GGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGL 809
Query: 343 KNFENMKDRG-----------------HGKIGAIYAI------------------LVDIY 367
K + RG +G+I + + +V +
Sbjct: 810 KILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVL 869
Query: 368 GQYGRFRDPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNL 427
+ RF++ + + +G+ P + L N + G + V + M I P
Sbjct: 870 NRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPN 929
Query: 428 VMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQ 487
V + ++ A GK EA + M + + P + +++TLM + + E+
Sbjct: 930 VAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVV 989
Query: 488 MESSGCTPDRKARQILQSAL 507
M + G D + +L + L
Sbjct: 990 MSNCGLKLDLVSYNVLITGL 1009
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 114/255 (44%)
Query: 253 QIYNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQ 312
+Y+ +I + + G + ++LE+F M P + T N+++ K+G+ +
Sbjct: 124 SVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKE 183
Query: 313 MQEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGR 372
M ++ PD F +I+ L G ++ + M+ G+ Y ++ Y + GR
Sbjct: 184 MLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR 243
Query: 373 FRDPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNV 432
F+ E + +K +G+ + +L + + + +L+ M I PN V N
Sbjct: 244 FKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNT 303
Query: 433 LINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSG 492
LIN F GK A + + M G+SP+ VT++ L+ I F + +++ ME+ G
Sbjct: 304 LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG 363
Query: 493 CTPDRKARQILQSAL 507
TP + +L L
Sbjct: 364 LTPSEVSYGVLLDGL 378
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/426 (21%), Positives = 168/426 (39%), Gaps = 42/426 (9%)
Query: 74 EFSGNSYNKSIQYCC------KLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGR 127
E GN + Y C K G + QM LG P ++ ++I+ + +G+
Sbjct: 675 EARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGK 734
Query: 128 TLEADAIFQEMVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEI 187
+ + + EM P L YNILL G+ K+ + L + GI ++ T
Sbjct: 735 IEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHS 794
Query: 188 LLDYHVNAGRLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMG 247
L+ + L+ I+ +G +++ + + +I NG A +V+ + +G
Sbjct: 795 LVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLG 854
Query: 248 LSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKAL 307
+SLD+ ++++ + E+ V +M ++ I P+ + LI C+ GD+ A
Sbjct: 855 ISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAF 914
Query: 308 ELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIY 367
+ +M P ++ L + GK D A L+
Sbjct: 915 VVKEEMIAHKICPPNVAESAMVRALAKCGKAD--------------------EATLLL-- 952
Query: 368 GQYGRFRDPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNL 427
RF LK++ L P+ + F L + + G + +++ +M G++ +L
Sbjct: 953 ----RF--------MLKMK-LVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDL 999
Query: 428 VMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFI-RAKKFHKVPEIYK 486
V NVLI G A +Y MK G + TY L++ + R F I K
Sbjct: 1000 VSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILK 1059
Query: 487 QMESSG 492
+ + G
Sbjct: 1060 DLLARG 1065
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/437 (21%), Positives = 171/437 (39%), Gaps = 9/437 (2%)
Query: 80 YNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMV 139
YN + CK G++ +A++L +M P S +Y SLI L G+T+ A +E
Sbjct: 616 YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAE 675
Query: 140 CFG-FNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
G P Y + G K G G M+++G + T ++D + G++
Sbjct: 676 ARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKI 735
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSI 258
+ T ++ EM ++ N Y ++ Y + + I G+ D+ +S+
Sbjct: 736 EKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSL 795
Query: 259 IDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGF 318
+ + L L++ + + D T+N LI C G++ A +L M G
Sbjct: 796 VLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGI 855
Query: 319 YPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDP-- 376
D ++S L ++ + M +G Y L++ + G +
Sbjct: 856 SLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFV 915
Query: 377 --EECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLI 434
EE IA + P + A A+ G ++ +L+ M + P + L+
Sbjct: 916 VKEEMIA----HKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLM 971
Query: 435 NAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCT 494
+ G EAL + +M + G+ DLV+Y+ L+ E+Y++M+ G
Sbjct: 972 HLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFL 1031
Query: 495 PDRKARQILQSALVVLE 511
+ + L L+ E
Sbjct: 1032 ANATTYKALIRGLLARE 1048
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 123/300 (41%), Gaps = 2/300 (0%)
Query: 66 PDGSNSGEEFSGNSYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASV 125
P+ N + +YN + K D+ + L + G P ++ SL+ +
Sbjct: 743 PEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICES 802
Query: 126 GRTLEADAIFQEMVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETY 185
I + +C G +N+L+ G + L+ VM +GI +++T
Sbjct: 803 NMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTC 862
Query: 186 EILLDYHVNAGRLDDTWLIINEMRSKGFQLNSFVY-GKVIGLYRDNGMWKKAVGIVEEIR 244
+ ++ R ++ ++++EM +G S Y G + GL R G K A + EE+
Sbjct: 863 DAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRV-GDIKTAFVVKEEMI 921
Query: 245 EMGLSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVA 304
+ ++++ K G+ EA + M + + P I ++ +L+ CK G+V
Sbjct: 922 AHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVI 981
Query: 305 KALELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILV 364
+ALEL M G D + +I+ L G + + +E MK G Y L+
Sbjct: 982 EALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALI 1041
Score = 37.0 bits (84), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 69 SNSGEEFSGNSYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRT 128
SN G + SYN I C GD+ A L +M+ GF ++ +Y +LI L +
Sbjct: 991 SNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETA 1050
Query: 129 LE-ADAIFQEMVCFGF 143
AD I ++++ GF
Sbjct: 1051 FSGADIILKDLLARGF 1066
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 155 bits (393), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 118/431 (27%), Positives = 201/431 (46%), Gaps = 8/431 (1%)
Query: 71 SGEEFSGNSYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLE 130
SG +S ++ I CK G +DEAM L +M+ +G + Y SLI G
Sbjct: 206 SGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDR 265
Query: 131 ADAIFQEMVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLD 190
A+F E++ G +P YN L+RGF K G L S + M + G+ N TY L+D
Sbjct: 266 GKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLID 325
Query: 191 YHVNAGRLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSL 250
G+ + ++N M K + N+ Y +I +G+ AV IVE +++
Sbjct: 326 GLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRP 385
Query: 251 DRQIYNSIIDTFGKYGELVEALEVFEKMQQES--IRPDIVTWNSLIRWHCKAGDVAKALE 308
D YN ++ G+L EA ++ M ++S PD++++N+LI CK + +AL+
Sbjct: 386 DNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALD 445
Query: 309 LFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKI---GAIYAILVD 365
++ + E+ D +T L K + K E K KI Y ++D
Sbjct: 446 IYDLLVEKLGAGDR---VTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMID 502
Query: 366 IYGQYGRFRDPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEP 425
+ + G + + +++ LQPS + L ++ ++G +Q ++ + M+ + P
Sbjct: 503 GFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFP 562
Query: 426 NLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIY 485
++V N++I+ AG K A S+ M G+SPDL TYS L+ F++ + +
Sbjct: 563 DVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFF 622
Query: 486 KQMESSGCTPD 496
+M SG PD
Sbjct: 623 DKMVDSGFEPD 633
Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 177/381 (46%), Gaps = 2/381 (0%)
Query: 113 ISYASLIEALASVGRTLEADAIFQEMVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMV 172
+S + L+E + +T A + M+ GF + +NILL+G + G LL
Sbjct: 108 VSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLRE 167
Query: 173 MEDMGICRNQETYEILLDYHVNAGRLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGM 232
M + + +Y ++ L+ + NEM+ G + +G +I + G
Sbjct: 168 MRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGK 227
Query: 233 WKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNS 292
+A+G ++E++ MGL D +Y S+I F GEL +F+++ + P +T+N+
Sbjct: 228 MDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNT 287
Query: 293 LIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRG 352
LIR CK G + +A E+F M E+G P+ + +I L +GK + M ++
Sbjct: 288 LIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKD 347
Query: 353 HGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTV 412
Y I+++ + G D E + +K +P + IL +G ++
Sbjct: 348 EEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEAS 407
Query: 413 KVLQLMEPEG--IEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMK 470
K+L LM + +P+++ N LI+ + +AL +Y L+ + + D VT + L+
Sbjct: 408 KLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLN 467
Query: 471 AFIRAKKFHKVPEIYKQMESS 491
+ ++A +K E++KQ+ S
Sbjct: 468 STLKAGDVNKAMELWKQISDS 488
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 135/321 (42%), Gaps = 37/321 (11%)
Query: 188 LLDYHVNAGRLDDTWLIINEMRSKGFQLNSFVYGKVI-GLYRDNGMWKKAVGIVEEIREM 246
LL+ +V + + ++ M +GF N + + ++ GL R N KAV ++ E+R
Sbjct: 113 LLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCR-NLECGKAVSLLREMRRN 171
Query: 247 GLSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKA 306
L D YN++I F + EL +ALE+ +M+ +VTW LI CKAG + +A
Sbjct: 172 SLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEA 231
Query: 307 LELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDI 366
+ +M+ G D ++ ++I + G+ D K F+ + +RG Y L+
Sbjct: 232 MGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRG 291
Query: 367 YGQYGRFRDPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPN 426
+ + G+ ++ E + + M G+ PN
Sbjct: 292 FCKLGQLKEASE-----------------------------------IFEFMIERGVRPN 316
Query: 427 LVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYK 486
+ LI+ GK KEAL + +LM + P+ VTY+ ++ + EI +
Sbjct: 317 VYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVE 376
Query: 487 QMESSGCTPDRKARQILQSAL 507
M+ PD IL L
Sbjct: 377 LMKKRRTRPDNITYNILLGGL 397
Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 125/276 (45%), Gaps = 4/276 (1%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQM--QALGFHPSSISYASLIEALASVGRTLEADAIFQ 136
+YN + C GD+DEA LL M + P ISY +LI L R +A I+
Sbjct: 389 TYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYD 448
Query: 137 EMV-CFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNA 195
+V G ++ NILL LK G + L + D I RN +TY ++D
Sbjct: 449 LLVEKLGAGDRVT-TNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKT 507
Query: 196 GRLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIY 255
G L+ ++ +MR Q + F Y ++ G +A + EE++ D +
Sbjct: 508 GMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSF 567
Query: 256 NSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQE 315
N +ID K G++ A + M + + PD+ T++ LI K G + +A+ F +M +
Sbjct: 568 NIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVD 627
Query: 316 QGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDR 351
GF PD I +++ G+ D + + + + D+
Sbjct: 628 SGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDK 663
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 89/185 (48%)
Query: 76 SGNSYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIF 135
+ ++Y I CK G ++ A LL +M+ PS Y L+ +L G +A +F
Sbjct: 493 NSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLF 552
Query: 136 QEMVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNA 195
+EM P + +NI++ G LK G + LL+ M G+ + TY L++ +
Sbjct: 553 EEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKL 612
Query: 196 GRLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIY 255
G LD+ ++M GF+ ++ + V+ G K +V+++ + + LD+++
Sbjct: 613 GYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELT 672
Query: 256 NSIID 260
+++D
Sbjct: 673 CTVMD 677
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 101/231 (43%), Gaps = 3/231 (1%)
Query: 89 KLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKLR 148
K GD+++AM L Q+ +S +Y ++I+ G A + +M P +
Sbjct: 471 KAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVF 530
Query: 149 FYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINEM 208
YN LL K+G L RL M+ + ++ I++D + AG + ++ M
Sbjct: 531 DYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGM 590
Query: 209 RSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGEL 268
G + F Y K+I + G +A+ +++ + G D I +S++ GE
Sbjct: 591 SRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGET 650
Query: 269 VEALEVFEKMQQESIRPDIVTWNSLIRWHCKAG---DVAKALELFTQMQEQ 316
+ E+ +K+ + I D +++ + C + D+AK L T +E+
Sbjct: 651 DKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRLLRVTDDKEE 701
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 54/117 (46%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
S+N I K GDI A +LL M G P +Y+ LI +G EA + F +M
Sbjct: 566 SFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKM 625
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNA 195
V GF P + +L+ + +G + L+ + D I ++E ++DY N+
Sbjct: 626 VDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNS 682
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 155 bits (392), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 106/426 (24%), Positives = 199/426 (46%)
Query: 80 YNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMV 139
YN I CK +++A L +M A PS I+Y +LI+ G ++ + + M
Sbjct: 217 YNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMK 276
Query: 140 CFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLD 199
P L +N LL+G K G++ +L M+D+G + T+ IL D + + + +
Sbjct: 277 ADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAE 336
Query: 200 DTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSII 259
+ G ++N++ ++ G +KA I+ GL + IYN++I
Sbjct: 337 AALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMI 396
Query: 260 DTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFY 319
D + + G+LV A E M+++ ++PD + +N LIR C+ G++ A + +M+ +G
Sbjct: 397 DGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVS 456
Query: 320 PDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEEC 379
P + + +I G ++D + M+D G Y L++ + + + +
Sbjct: 457 PSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIV 516
Query: 380 IAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGV 439
++ G+ P ++ +L + +G E + + M +GIE NLV N LI+ +
Sbjct: 517 KRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSM 576
Query: 440 AGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKA 499
GK EA + + G+ PD+ TY++L+ + A + +Y++M+ SG P K
Sbjct: 577 TGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKT 636
Query: 500 RQILQS 505
+L S
Sbjct: 637 YHLLIS 642
Score = 142 bits (357), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 191/396 (48%), Gaps = 10/396 (2%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+YN I CK G+ +++ + +M+A PS I++ +L++ L G +A+ + +EM
Sbjct: 251 TYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEM 310
Query: 139 VCFGFNPKLRFYNILLRGFL--KKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAG 196
GF P ++IL G+ +K LG V D G+ N T ILL+ G
Sbjct: 311 KDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAV--DSGVKMNAYTCSILLNALCKEG 368
Query: 197 RLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYN 256
+++ I+ +KG N +Y +I Y G A +E + + G+ D YN
Sbjct: 369 KIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYN 428
Query: 257 SIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQ 316
+I F + GE+ A + KM+ + + P + T+N LI + + + K ++ +M++
Sbjct: 429 CLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDN 488
Query: 317 GFYPDPKIFITIISCL---GELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRF 373
G P+ + T+I+CL +L + ++K+ +M+DRG IY +L+D G+
Sbjct: 489 GTMPNVVSYGTLINCLCKGSKLLEAQIVKR---DMEDRGVSPKVRIYNMLIDGCCSKGKI 545
Query: 374 RDPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVL 433
D + +G++ + + L + + G + +L + +G++P++ N L
Sbjct: 546 EDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSL 605
Query: 434 INAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLM 469
I+ +G AG + +++Y MK GI P L TY L+
Sbjct: 606 ISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI 641
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 176/404 (43%), Gaps = 35/404 (8%)
Query: 93 IDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKLRFYNI 152
I EA L ++ G +PSS S L++ L + +F ++ F P Y
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184
Query: 153 LLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINEMRSKG 212
++ +K +G G L M+ I + Y +L+D R++D + +EM ++
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244
Query: 213 FQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGELVEAL 272
L S + YN++ID + K G ++
Sbjct: 245 L-LPSLI----------------------------------TYNTLIDGYCKAGNPEKSF 269
Query: 273 EVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCL 332
+V E+M+ + I P ++T+N+L++ KAG V A + +M++ GF PD F +
Sbjct: 270 KVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGY 329
Query: 333 GELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSG 392
K + +E D G +IL++ + G+ EE + +GL P+
Sbjct: 330 SSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNE 389
Query: 393 SMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHL 452
++ + + Y ++G ++ ME +G++P+ + N LI F G+ + A +
Sbjct: 390 VIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNK 449
Query: 453 MKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPD 496
MK G+SP + TY+ L+ + R +F K +I K+ME +G P+
Sbjct: 450 MKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPN 493
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 175/413 (42%), Gaps = 39/413 (9%)
Query: 80 YNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMV 139
YN I C+ GD+ A + M+ G P ++Y LI +G A+ +M
Sbjct: 392 YNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMK 451
Query: 140 CFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLD 199
G +P + YNIL+ G+ +K +L MED G N +Y L++ +L
Sbjct: 452 LKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLL 511
Query: 200 DTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSII 259
+ ++ +M +G +Y +I G + A +E+ + G+ L+ YN++I
Sbjct: 512 EAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLI 571
Query: 260 DTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFY 319
D G+L EA ++ ++ ++ ++PD+ T+NSLI + AG+V + + L+ +M+ G
Sbjct: 572 DGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIK 631
Query: 320 PDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEEC 379
P K + +IS + G ++ ++ F M
Sbjct: 632 PTLKTYHLLISLCTKEG-IELTERLFGEM------------------------------- 659
Query: 380 IAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGV 439
+LK + L +G + C YA G E+ + + M + I + N LI
Sbjct: 660 --SLKPDLLVYNGVLHC-----YAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLK 712
Query: 440 AGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSG 492
GK E S+ M + P+ TY+ ++K K + Y++M+ G
Sbjct: 713 VGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKG 765
Score = 105 bits (263), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 129/262 (49%), Gaps = 12/262 (4%)
Query: 80 YNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMV 139
YN I CC G I++A +M G + ++Y +LI+ L+ G+ EA+ + E+
Sbjct: 532 YNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEIS 591
Query: 140 CFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDM---GICRNQETYEILLDYHVNAG 196
G P + YN L+ G+ G G R + + E+M GI +TY +L+ G
Sbjct: 592 RKGLKPDVFTYNSLISGY---GFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG 648
Query: 197 RLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYN 256
++ T + EM + + VY V+ Y +G +KA + +++ E + LD+ YN
Sbjct: 649 -IELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYN 704
Query: 257 SIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQ 316
S+I K G+L E + ++M + P+ T+N +++ HC+ D A + +MQE+
Sbjct: 705 SLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEK 764
Query: 317 GFYPDPKIFITIISCLGELGKW 338
GF D I ++S L E +W
Sbjct: 765 GFLLDVCIGNELVSGLKE--EW 784
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 116/292 (39%), Gaps = 35/292 (11%)
Query: 216 NSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGELVEALEVF 275
+ F Y + L ++ M +A + +R G+ ++D K + + VF
Sbjct: 108 HDFSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVF 167
Query: 276 EKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGEL 335
+ + RP + I+ K DV K LELF +M+ YP +FI
Sbjct: 168 LNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPS--VFI--------- 216
Query: 336 GKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMF 395
Y +L+D + R D E+ + L PS +
Sbjct: 217 ------------------------YNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITY 252
Query: 396 CILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKD 455
L + Y + G E++ KV + M+ + IEP+L+ N L+ AG ++A +V MKD
Sbjct: 253 NTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKD 312
Query: 456 IGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQILQSAL 507
+G PD T+S L + +K +Y+ SG + IL +AL
Sbjct: 313 LGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNAL 364
Score = 33.1 bits (74), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 73/173 (42%), Gaps = 4/173 (2%)
Query: 71 SGEEFSGNSYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLE 130
SG + + +Y+ I C K G I+ L +M P + Y ++ A G +
Sbjct: 628 SGIKPTLKTYHLLISLCTKEG-IELTERLFGEMS---LKPDLLVYNGVLHCYAVHGDMEK 683
Query: 131 ADAIFQEMVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLD 190
A + ++M+ YN L+ G LK G L L+ M + +TY I++
Sbjct: 684 AFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVK 743
Query: 191 YHVNAGRLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEI 243
H ++ EM+ KGF L+ + +++ ++ K+A ++ E+
Sbjct: 744 GHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM 796
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 153 bits (386), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/429 (23%), Positives = 193/429 (44%), Gaps = 38/429 (8%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+YN I CK G+I+ A+++L +M P ++Y +++ +L G+ +A + M
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRMSV---SPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
+ P + Y IL+ + +G +LL M D G + TY +L++ GRL
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSI 258
D+ +N+M S G Q N + ++ G W A ++ ++ G S +N +
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL 350
Query: 259 IDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGF 318
I+ + G L A+++ EKM Q +P+ +++N L+ CK + +A+E +M +G
Sbjct: 351 INFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC 410
Query: 319 YPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEE 378
YPD + T+++ L KD G+ D E
Sbjct: 411 YPDIVTYNTMLTAL---------------CKD--------------------GKVEDAVE 435
Query: 379 CIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFG 438
+ L +G P + + + A+ G + +K+L M + ++P+ + + L+
Sbjct: 436 ILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLS 495
Query: 439 VAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRK 498
GK EA+ +H + +GI P+ VT++++M ++++ + + M + GC P+
Sbjct: 496 REGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNET 555
Query: 499 ARQILQSAL 507
+ IL L
Sbjct: 556 SYTILIEGL 564
Score = 139 bits (351), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 170/380 (44%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+YN ++ C G + +AM +L +M +P I+Y LIEA A + EM
Sbjct: 206 TYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEM 265
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
G P + YN+L+ G K+G L + L M G N T+ I+L + GR
Sbjct: 266 RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRW 325
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSI 258
D ++ +M KGF + + +I G+ +A+ I+E++ + G + YN +
Sbjct: 326 MDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPL 385
Query: 259 IDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGF 318
+ F K ++ A+E E+M PDIVT+N+++ CK G V A+E+ Q+ +G
Sbjct: 386 LHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGC 445
Query: 319 YPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEE 378
P + T+I L + GK K + M+ + Y+ LV + G+ + +
Sbjct: 446 SPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIK 505
Query: 379 CIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFG 438
+ G++P+ F + + ++ + L M G +PN +LI
Sbjct: 506 FFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLA 565
Query: 439 VAGKYKEALSVYHLMKDIGI 458
G KEAL + + + + G+
Sbjct: 566 YEGMAKEALELLNELCNKGL 585
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 131/277 (47%), Gaps = 3/277 (1%)
Query: 231 GMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTW 290
G +KA I+E + G D YN +I + K GE+ AL V ++M S+ PD+VT+
Sbjct: 151 GKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTY 207
Query: 291 NSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKD 350
N+++R C +G + +A+E+ +M ++ YPD + +I K + M+D
Sbjct: 208 NTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRD 267
Query: 351 RGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQ 410
RG Y +LV+ + GR + + + + G QP+ I+ + G
Sbjct: 268 RGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMD 327
Query: 411 TVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMK 470
K+L M +G P++V N+LIN G A+ + M G P+ ++Y+ L+
Sbjct: 328 AEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLH 387
Query: 471 AFIRAKKFHKVPEIYKQMESSGCTPDRKARQILQSAL 507
F + KK + E ++M S GC PD + +AL
Sbjct: 388 GFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTAL 424
Score = 99.0 bits (245), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 124/309 (40%), Gaps = 73/309 (23%)
Query: 257 SIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQ 316
++I F + G+ +A ++ E ++ PD++T+N +I +CKAG++ AL + +M
Sbjct: 142 TLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS-- 199
Query: 317 GFYPDPKIFITIISCLGELGKW-----------------DVIK----------------- 342
PD + TI+ L + GK DVI
Sbjct: 200 -VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHA 258
Query: 343 -KNFENMKDRGHGKIGAIYAILVD-----------------------------------I 366
K + M+DRG Y +LV+
Sbjct: 259 MKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRS 318
Query: 367 YGQYGRFRDPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPN 426
GR+ D E+ +A + +G PS F IL N ++GL + + +L+ M G +PN
Sbjct: 319 MCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPN 378
Query: 427 LVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYK 486
+ N L++ F K A+ M G PD+VTY+T++ A + K EI
Sbjct: 379 SLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILN 438
Query: 487 QMESSGCTP 495
Q+ S GC+P
Sbjct: 439 QLSSKGCSP 447
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 404 QQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLV 463
+ G E+ K L+ M G P+++ LI F GK ++A + +++ G PD++
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVI 173
Query: 464 TYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPD 496
TY+ ++ + +A + + + +M S PD
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRMSVS---PD 203
>sp|Q9LW84|PP236_ARATH Pentatricopeptide repeat-containing protein At3g16010
OS=Arabidopsis thaliana GN=At3g16010 PE=2 SV=1
Length = 642
Score = 153 bits (386), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 108/432 (25%), Positives = 198/432 (45%), Gaps = 28/432 (6%)
Query: 76 SGNSYNKSIQYCCKLGDIDEAMALLAQMQALG-FHPSSISYASLIEALASVGRTLEADAI 134
+ ++YN I + G ++ + +M G P +I+Y++LI + +GR A +
Sbjct: 196 TSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRL 255
Query: 135 FQEMVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVN 194
F EM P + Y LL + K G + L M+ G TY L+
Sbjct: 256 FDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGK 315
Query: 195 AGRLDDTWLIINEMRSKGFQ-----LNSF--VYGKV------IGLYRDNGMWKKAVGIVE 241
AGR+D+ + +M G LN+ + GKV ++ + GMW+ +V
Sbjct: 316 AGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVS 375
Query: 242 EIREMGLSLDRQIYNSIIDT-FGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKA 300
YN++I F + E F+KM+ +S+ P T++ LI +CK
Sbjct: 376 -------------YNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKT 422
Query: 301 GDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIY 360
V KAL L +M E+GF P P + ++I+ LG+ +++ + F+ +K+ +Y
Sbjct: 423 NRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVY 482
Query: 361 AILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEP 420
A+++ +G+ G+ + + +K +G P + L + + G+ + +L+ ME
Sbjct: 483 AVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEE 542
Query: 421 EGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHK 480
G ++ N+++N F G + A+ ++ +K GI PD VTY+TL+ F A F +
Sbjct: 543 NGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEE 602
Query: 481 VPEIYKQMESSG 492
+ ++M+ G
Sbjct: 603 AARMMREMKDKG 614
Score = 125 bits (315), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 98/403 (24%), Positives = 180/403 (44%), Gaps = 17/403 (4%)
Query: 112 SISYASLIEALASVGRTL---EADAIFQEMVCFGFNPKLRFYNILLRGFLKKGLLGLGSR 168
S+S A L E + ++GR +A ++F + P YN ++ +++G
Sbjct: 159 SVSPAVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHE 218
Query: 169 LLMVMEDMGIC-RNQETYEILLDYHVNAGRLDDTWLIINEMRSKGFQLNSFVYGKVIGLY 227
+ M + G C + TY L+ + GR D + +EM+ Q +Y ++G+Y
Sbjct: 219 VYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIY 278
Query: 228 RDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQESIRPDI 287
G +KA+ + EE++ G S Y +I GK G + EA ++ M ++ + PD+
Sbjct: 279 FKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDV 338
Query: 288 VTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCL-------GELGKWDV 340
V N+L+ K G V + +F++M P + T+I L E+ W
Sbjct: 339 VFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSW-- 396
Query: 341 IKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFCILAN 400
F+ MK Y+IL+D Y + R + + +G P + +C L N
Sbjct: 397 ----FDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIN 452
Query: 401 AYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISP 460
A + E ++ + ++ + + V+I FG GK EA+ +++ MK+ G P
Sbjct: 453 ALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGP 512
Query: 461 DLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQIL 503
D+ Y+ LM ++A ++ + ++ME +GC D + I+
Sbjct: 513 DVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNII 555
Score = 119 bits (299), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 165/373 (44%), Gaps = 36/373 (9%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+Y + I+ K G +DEA M G P + +L+ L VGR E +F EM
Sbjct: 305 TYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEM 364
Query: 139 VCFGFNPKLRFYNILLRG-FLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGR 197
+ P + YN +++ F K + S M+ + ++ TY IL+D + R
Sbjct: 365 GMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNR 424
Query: 198 LDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNS 257
++ L++ EM KGF Y +I ++ A + +E++E ++ ++Y
Sbjct: 425 VEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAV 484
Query: 258 IIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQG 317
+I FGK G+L EA+++F +M+ + PD+ +N+L+ KAG + +A L +M+E G
Sbjct: 485 MIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENG 544
Query: 318 FYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPE 377
C ++ ++I F + G R
Sbjct: 545 -------------CRADINSHNIILNGF----------------------ARTGVPRRAI 569
Query: 378 ECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAF 437
E +K G++P G + L +A G+ E+ ++++ M+ +G E + + + +++A
Sbjct: 570 EMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAV 629
Query: 438 GVAGKYKEALSVY 450
G K+ +S +
Sbjct: 630 GNVDHEKDDVSSF 642
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 148/317 (46%), Gaps = 13/317 (4%)
Query: 209 RSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEI-REMGLSLDRQIYNSIIDTFGKYGE 267
+ + FQ + Y +I + ++ + ++E+ R +S+ + + ++ G+
Sbjct: 118 KRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKM 177
Query: 268 LVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQG-FYPDPKIFI 326
+ +AL VF + + +P T+NS+I + G K E++T+M +G +PD +
Sbjct: 178 VSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYS 237
Query: 327 TIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLE 386
+IS +LG+ D + F+ MKD IY L+ IY + G+ + +K
Sbjct: 238 ALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRA 297
Query: 387 GLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEA 446
G P+ + L + G ++ + M +G+ P++V LN L+N G G+ +E
Sbjct: 298 GCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEEL 357
Query: 447 LSVYHLMKDIGISPDLVTYSTLMKAFIRAK-KFHKVPEIYKQMESSGCTPDRKARQIL-- 503
+V+ M +P +V+Y+T++KA +K +V + +M++ +P IL
Sbjct: 358 TNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILID 417
Query: 504 --------QSALVVLEQ 512
+ AL++LE+
Sbjct: 418 GYCKTNRVEKALLLLEE 434
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 153 bits (386), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 183/397 (46%), Gaps = 1/397 (0%)
Query: 101 AQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKLRFYNILLRGFLKK 160
A+M G P ++ LI+AL + A + ++M +G P + + +++G++++
Sbjct: 178 AKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEE 237
Query: 161 GLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINEMRSK-GFQLNSFV 219
G L R+ M + G + + +++ GR++D I EM ++ GF + +
Sbjct: 238 GDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYT 297
Query: 220 YGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGELVEALEVFEKMQ 279
+ ++ G K A+ I++ + + G D YNS+I K GE+ EA+EV ++M
Sbjct: 298 FNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMI 357
Query: 280 QESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWD 339
P+ VT+N+LI CK V +A EL + +G PD F ++I L
Sbjct: 358 TRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHR 417
Query: 340 VIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFCILA 399
V + FE M+ +G Y +L+D G+ + + ++L G S + L
Sbjct: 418 VAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLI 477
Query: 400 NAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGIS 459
+ + + + ++ ME G+ N V N LI+ + + ++A + M G
Sbjct: 478 DGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQK 537
Query: 460 PDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPD 496
PD TY++L+ F R K +I + M S+GC PD
Sbjct: 538 PDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPD 574
Score = 146 bits (369), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/421 (24%), Positives = 195/421 (46%), Gaps = 3/421 (0%)
Query: 78 NSYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQE 137
+++N I+ C+ + A+ +L M + G P ++ ++++ G A I ++
Sbjct: 190 STFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQ 249
Query: 138 MVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDM-GICRNQETYEILLDYHVNAG 196
MV FG + N+++ GF K+G + + M + G +Q T+ L++ AG
Sbjct: 250 MVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAG 309
Query: 197 RLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYN 256
+ I++ M +G+ + + Y VI G K+AV +++++ S + YN
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYN 369
Query: 257 SIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQ 316
++I T K ++ EA E+ + + I PD+ T+NSLI+ C + A+ELF +M+ +
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK 429
Query: 317 GFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDP 376
G PD + +I L GK D + M+ G + Y L+D + + + R+
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREA 489
Query: 377 EECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINA 436
EE +++ G+ + + L + + E +++ M EG +P+ N L+
Sbjct: 490 EEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTH 549
Query: 437 FGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYK--QMESSGCT 494
F G K+A + M G PD+VTY TL+ +A + ++ + QM+ T
Sbjct: 550 FCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLT 609
Query: 495 P 495
P
Sbjct: 610 P 610
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/417 (23%), Positives = 183/417 (43%), Gaps = 6/417 (1%)
Query: 91 GDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVC-FGFNPKLRF 149
GD+D A+ + QM G S++S ++ GR +A QEM GF P
Sbjct: 238 GDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYT 297
Query: 150 YNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINEMR 209
+N L+ G K G + ++ VM G + TY ++ G + + ++++M
Sbjct: 298 FNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMI 357
Query: 210 SKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGELV 269
++ N+ Y +I ++A + + G+ D +NS+I
Sbjct: 358 TRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHR 417
Query: 270 EALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITII 329
A+E+FE+M+ + PD T+N LI C G + +AL + QM+ G + T+I
Sbjct: 418 VAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLI 477
Query: 330 SCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQ 389
+ K ++ F+ M+ G + Y L+D + R D + + + +EG +
Sbjct: 478 DGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQK 537
Query: 390 PSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSV 449
P + L + + G ++ ++Q M G EP++V LI+ AG+ + A +
Sbjct: 538 PDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKL 597
Query: 450 YH--LMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQM-ESSGCTPDRKARQIL 503
MK I ++P Y+ +++ R +K + ++++M E + PD + +I+
Sbjct: 598 LRSIQMKGINLTPH--AYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIV 652
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 148/342 (43%), Gaps = 2/342 (0%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+YN I CK ++EA L + + G P ++ SLI+ L A +F+EM
Sbjct: 367 TYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEM 426
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
G P YN+L+ KG L +L ME G R+ TY L+D A +
Sbjct: 427 RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKT 486
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSI 258
+ I +EM G NS Y +I + + A +++++ G D+ YNS+
Sbjct: 487 REAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSL 546
Query: 259 IDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGF 318
+ F + G++ +A ++ + M PDIVT+ +LI CKAG V A +L +Q +G
Sbjct: 547 LTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGI 606
Query: 319 YPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAI-YAILVD-IYGQYGRFRDP 376
P + +I L K F M ++ A+ Y I+ + G R+
Sbjct: 607 NLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREA 666
Query: 377 EECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLM 418
+ + L +G P S +LA + E VK++ ++
Sbjct: 667 VDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMV 708
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 152/362 (41%), Gaps = 41/362 (11%)
Query: 185 YEILLDYHVNAGRLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVE-EI 243
YE +L +G DD I+ +M+S ++ + + +I Y + + + +V+ I
Sbjct: 86 YEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMI 145
Query: 244 REMGLSLDRQIYNSIIDTF--GKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAG 301
E GL D YN +++ G +LVE KM I+PD+ T+N LI+ C+A
Sbjct: 146 DEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHA--KMSVWGIKPDVSTFNVLIKALCRAH 203
Query: 302 DVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYA 361
+ A+ + M G PD K F T++ E G D + E M + G
Sbjct: 204 QLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVN 263
Query: 362 ILVDIYGQYGRFRDPEECIAAL-KLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEP 420
++V + + GR D I + +G P F L N + G + ++++ +M
Sbjct: 264 VIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQ 323
Query: 421 EGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKF-- 478
EG +P++ N +I+ G+ KEA+ V M SP+ VTY+TL+ + +
Sbjct: 324 EGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEE 383
Query: 479 --------------------------------HKVP-EIYKQMESSGCTPDRKARQILQS 505
H+V E++++M S GC PD +L
Sbjct: 384 ATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLID 443
Query: 506 AL 507
+L
Sbjct: 444 SL 445
Score = 67.0 bits (162), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 95/200 (47%), Gaps = 12/200 (6%)
Query: 302 DVAKALELFT-QMQEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIY 360
D + AL LF ++ F P+P ++ I+ LG G +D +KK E+MK + +
Sbjct: 62 DDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTF 121
Query: 361 AILVDIYGQYGRFRDPEECIAALKLE--GLQPSGSMFCILANAYAQQGLCEQTVKVLQL- 417
IL++ Y Q+ +D + ++ GL+P + + N ++K++++
Sbjct: 122 LILIESYAQF-ELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGN----SLKLVEIS 176
Query: 418 ---MEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIR 474
M GI+P++ NVLI A A + + A+ + M G+ PD T++T+M+ +I
Sbjct: 177 HAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIE 236
Query: 475 AKKFHKVPEIYKQMESSGCT 494
I +QM GC+
Sbjct: 237 EGDLDGALRIREQMVEFGCS 256
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 44/89 (49%)
Query: 72 GEEFSGNSYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEA 131
G++ +YN + + C+ GDI +A ++ M + G P ++Y +LI L GR A
Sbjct: 535 GQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVA 594
Query: 132 DAIFQEMVCFGFNPKLRFYNILLRGFLKK 160
+ + + G N YN +++G +K
Sbjct: 595 SKLLRSIQMKGINLTPHAYNPVIQGLFRK 623
>sp|Q9SHK2|PPR17_ARATH Pentatricopeptide repeat-containing protein At1g06580
OS=Arabidopsis thaliana GN=At1g06580 PE=2 SV=1
Length = 500
Score = 152 bits (385), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 101/411 (24%), Positives = 189/411 (45%), Gaps = 35/411 (8%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
S+ I C+ + A++ L +M LGF PS +++ SL+ V R EA ++ ++
Sbjct: 116 SFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQI 175
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
V G+ P + YN ++ +KG VN L
Sbjct: 176 VGLGYEPNVVIYNTIIDSLCEKG------------------------------QVNTA-L 204
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSI 258
D ++ M+ G + + Y +I +G W + I+ ++ MG+S D ++++
Sbjct: 205 D----VLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSAL 260
Query: 259 IDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGF 318
ID +GK G+L+EA + + +M Q S+ P+IVT+NSLI C G + +A ++ + +GF
Sbjct: 261 IDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGF 320
Query: 319 YPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEE 378
+P+ + T+I+ + + D K M G Y L Y Q G+F E+
Sbjct: 321 FPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEK 380
Query: 379 CIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFG 438
+ + G+ P F IL + G + + L+ ++ ++ N++I
Sbjct: 381 VLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLC 440
Query: 439 VAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQME 489
A K ++A ++ + G+SPD++TY T+M R + + + E+Y++M+
Sbjct: 441 KADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQ 491
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 147/335 (43%), Gaps = 35/335 (10%)
Query: 173 MEDMGICRNQETYEILLDYHVNAGRLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGM 232
+E +GI + ++ L+D RL + +M GF+ + +G ++ +
Sbjct: 105 LEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNR 164
Query: 233 WKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNS 292
+ +A+ +V++I +G + IYN+IID+ + G++ AL+V + M++ IRPD+VT+NS
Sbjct: 165 FYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNS 224
Query: 293 LIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRG 352
LI +G + + + M G PD F +I G+ G+ KK + M R
Sbjct: 225 LITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQR- 283
Query: 353 HGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTV 412
+ P+ + L N GL ++
Sbjct: 284 ----------------------------------SVNPNIVTYNSLINGLCIHGLLDEAK 309
Query: 413 KVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAF 472
KVL ++ +G PN V N LIN + A + + + + +M G+ D TY+TL + +
Sbjct: 310 KVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGY 369
Query: 473 IRAKKFHKVPEIYKQMESSGCTPDRKARQILQSAL 507
+A KF ++ +M S G PD IL L
Sbjct: 370 CQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGL 404
Score = 119 bits (298), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 89/427 (20%), Positives = 188/427 (44%), Gaps = 1/427 (0%)
Query: 71 SGEEFSGNS-YNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTL 129
+ FSG S Y + ++ ++A+ L M PS + ++ L+ A+A + +
Sbjct: 37 NSRAFSGRSDYRERLRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYE 96
Query: 130 EADAIFQEMVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILL 189
++F+ + G + L + L+ F + L L L M +G + T+ L+
Sbjct: 97 AVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLV 156
Query: 190 DYHVNAGRLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLS 249
+ + R + +++++ G++ N +Y +I + G A+ +++ +++MG+
Sbjct: 157 NGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIR 216
Query: 250 LDRQIYNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALEL 309
D YNS+I G + + M + I PD++T+++LI + K G + +A +
Sbjct: 217 PDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQ 276
Query: 310 FTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQ 369
+ +M ++ P+ + ++I+ L G D KK + +G Y L++ Y +
Sbjct: 277 YNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCK 336
Query: 370 YGRFRDPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVM 429
R D + + + +G+ + L Y Q G KVL M G+ P++
Sbjct: 337 AKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYT 396
Query: 430 LNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQME 489
N+L++ GK +AL ++ ++TY+ ++K +A K ++ +
Sbjct: 397 FNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLA 456
Query: 490 SSGCTPD 496
G +PD
Sbjct: 457 LKGVSPD 463
>sp|O64624|PP163_ARATH Pentatricopeptide repeat-containing protein At2g18940
OS=Arabidopsis thaliana GN=At2g18940 PE=2 SV=1
Length = 822
Score = 152 bits (385), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 108/435 (24%), Positives = 187/435 (42%), Gaps = 35/435 (8%)
Query: 97 MALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKLRFYNILLRG 156
+ +L +M++ G + ++++ A A G EA F E+ G+ P YN LL+
Sbjct: 266 LGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQV 325
Query: 157 FLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINEMRSKGFQLN 216
F K G+ +L ME+ + TY L+ +V AG + +I M KG N
Sbjct: 326 FGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPN 385
Query: 217 SFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGELVEALEVFE 276
+ Y VI Y G +A+ + ++E G + YN+++ GK E +++
Sbjct: 386 AITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLC 445
Query: 277 KMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELG 336
M+ P+ TWN+++ G +F +M+ GF PD F T+IS G G
Sbjct: 446 DMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCG 505
Query: 337 KWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFC 396
K + M G Y L++ + G +R E I+ +K +G +P+ + +
Sbjct: 506 SEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYS 565
Query: 397 ILANAYAQQG------LCEQTVK-----------------------------VLQLMEPE 421
++ YA+ G E +K L +
Sbjct: 566 LMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKH 625
Query: 422 GIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKV 481
G +P++V+ N +++ F Y +A + +++ G+SPDLVTY++LM ++R + K
Sbjct: 626 GYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKA 685
Query: 482 PEIYKQMESSGCTPD 496
EI K +E S PD
Sbjct: 686 EEILKTLEKSQLKPD 700
Score = 142 bits (358), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 166/361 (45%), Gaps = 7/361 (1%)
Query: 147 LRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWL--- 203
+R Y +L + + G L M++MG TY ++LD GR +W
Sbjct: 210 VRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGR---SWRKIL 266
Query: 204 -IINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTF 262
+++EMRSKG + + F V+ G+ ++A E++ G YN+++ F
Sbjct: 267 GVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVF 326
Query: 263 GKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDP 322
GK G EAL V ++M++ S D VT+N L+ + +AG +A + M ++G P+
Sbjct: 327 GKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNA 386
Query: 323 KIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAA 382
+ T+I G+ GK D K F +MK+ G Y ++ + G+ R + + +
Sbjct: 387 ITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCD 446
Query: 383 LKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGK 442
+K G P+ + + + +G+ + +V + M+ G EP+ N LI+A+G G
Sbjct: 447 MKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGS 506
Query: 443 YKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQI 502
+A +Y M G + + TY+ L+ A R + + M+S G P + +
Sbjct: 507 EVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSL 566
Query: 503 L 503
+
Sbjct: 567 M 567
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 180/386 (46%), Gaps = 7/386 (1%)
Query: 114 SYASLIEALASVGRTLEADAIFQEMVCFGFNPKLRFYNILLRGFLKKGLLGLGSR-LLMV 172
+Y +++ A + G+ +A +F+ M G +P L YN++L F G +G R +L V
Sbjct: 212 AYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVF---GKMGRSWRKILGV 268
Query: 173 MEDM---GICRNQETYEILLDYHVNAGRLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRD 229
+++M G+ ++ T +L G L + E++S G++ + Y ++ ++
Sbjct: 269 LDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGK 328
Query: 230 NGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVT 289
G++ +A+ +++E+ E D YN ++ + + G EA V E M ++ + P+ +T
Sbjct: 329 AGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAIT 388
Query: 290 WNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMK 349
+ ++I + KAG +AL+LF M+E G P+ + ++S LG+ + + + K +MK
Sbjct: 389 YTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMK 448
Query: 350 DRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFCILANAYAQQGLCE 409
G A + ++ + G G + +K G +P F L +AY + G
Sbjct: 449 SNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEV 508
Query: 410 QTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLM 469
K+ M G + N L+NA G ++ +V MK G P +YS ++
Sbjct: 509 DASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLML 568
Query: 470 KAFIRAKKFHKVPEIYKQMESSGCTP 495
+ + + + + I +++ P
Sbjct: 569 QCYAKGGNYLGIERIENRIKEGQIFP 594
Score = 125 bits (314), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 86/425 (20%), Positives = 185/425 (43%), Gaps = 1/425 (0%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+Y I K G DEA+ L M+ G P++ +Y +++ L R+ E + +M
Sbjct: 388 TYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDM 447
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
G +P +N +L KG+ +R+ M+ G +++T+ L+ + G
Sbjct: 448 KSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSE 507
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSI 258
D + EM GF Y ++ G W+ ++ +++ G Y+ +
Sbjct: 508 VDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLM 567
Query: 259 IDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGF 318
+ + K G + + ++++ I P + +L+ + K +A + FT ++ G+
Sbjct: 568 LQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGY 627
Query: 319 YPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEE 378
PD IF +++S +D + E++++ G Y L+D+Y + G EE
Sbjct: 628 KPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEE 687
Query: 379 CIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFG 438
+ L+ L+P + + + ++GL ++ V++L M GI P + N ++ +
Sbjct: 688 ILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYT 747
Query: 439 VAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMES-SGCTPDR 497
G + E V M P+ +T+ ++ + RA K+ + + ++++ C D+
Sbjct: 748 AMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTFDPCFDDQ 807
Query: 498 KARQI 502
+++
Sbjct: 808 SIQRL 812
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 133/273 (48%), Gaps = 5/273 (1%)
Query: 229 DNGMWKKAVGIVEEI----REMGLSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQESIR 284
D+G W++AV + E + L LD Q+ + G+ + A ++ +K+ +
Sbjct: 148 DSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYL 207
Query: 285 PDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGK-WDVIKK 343
D+ + +++ + + G KA++LF +M+E G P + I+ G++G+ W I
Sbjct: 208 LDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILG 267
Query: 344 NFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFCILANAYA 403
+ M+ +G + ++ + G R+ +E A LK G +P + L +
Sbjct: 268 VLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFG 327
Query: 404 QQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLV 463
+ G+ + + VL+ ME + V N L+ A+ AG KEA V +M G+ P+ +
Sbjct: 328 KAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAI 387
Query: 464 TYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPD 496
TY+T++ A+ +A K + +++ M+ +GC P+
Sbjct: 388 TYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPN 420
Score = 108 bits (271), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 147/305 (48%), Gaps = 3/305 (0%)
Query: 204 IINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFG 263
+++++ + + L+ Y ++ Y G ++KA+ + E ++EMG S YN I+D FG
Sbjct: 197 LLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFG 256
Query: 264 KYGE-LVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDP 322
K G + L V ++M+ + ++ D T ++++ + G + +A E F +++ G+ P
Sbjct: 257 KMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGT 316
Query: 323 KIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAA 382
+ ++ G+ G + + M++ Y LV Y + G ++ I
Sbjct: 317 VTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEM 376
Query: 383 LKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGK 442
+ +G+ P+ + + +AY + G ++ +K+ M+ G PN N +++ G +
Sbjct: 377 MTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSR 436
Query: 443 YKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHK-VPEIYKQMESSGCTPDRKARQ 501
E + + MK G SP+ T++T++ A K K V ++++M+S G PDR
Sbjct: 437 SNEMIKMLCDMKSNGCSPNRATWNTML-ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFN 495
Query: 502 ILQSA 506
L SA
Sbjct: 496 TLISA 500
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 105/239 (43%), Gaps = 8/239 (3%)
Query: 275 FEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQM----QEQGFYPDPKIFITIIS 330
F+ ++ E +R D+V SL++ +G +A+ LF + D ++ +
Sbjct: 127 FDSVKSELLRTDLV---SLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVR 183
Query: 331 CLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQP 390
LG ++ V K + + + + Y ++ Y + G++ + +K G P
Sbjct: 184 ILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSP 243
Query: 391 SGSMFCILANAYAQQGLC-EQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSV 449
+ + ++ + + + G + + VL M +G++ + + +++A G +EA
Sbjct: 244 TLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEF 303
Query: 450 YHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQILQSALV 508
+ +K G P VTY+ L++ F +A + + + K+ME + C D L +A V
Sbjct: 304 FAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYV 362
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 152 bits (383), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 122/436 (27%), Positives = 201/436 (46%), Gaps = 14/436 (3%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+YN I+ CK + ++A L M GF P SY+++I LA G+ +A +F EM
Sbjct: 151 TYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEM 210
Query: 139 VCFGFNPKLRFYNILLRGFLK----KGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVN 194
G P + YNIL+ GFLK K + L RLL ED + N +T+ I++
Sbjct: 211 SERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLL---EDSSVYPNVKTHNIMISGLSK 267
Query: 195 AGRLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQI 254
GR+DD I M+ + + + Y +I D G KA + E+ E S+D
Sbjct: 268 CGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVT 327
Query: 255 YNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQ 314
YN+++ F + G++ E+LE++ M+ ++ +IV++N LI+ + G + +A ++ M
Sbjct: 328 YNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMP 386
Query: 315 EQGFYPDPK---IFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYG 371
+G+ D IFI + G + K + + E+ GH + A YA ++D +
Sbjct: 387 AKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVES--SGGHLDVYA-YASIIDCLCKKK 443
Query: 372 RFRDPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLN 431
R + + + G++ + + L + + L+ M G P +V N
Sbjct: 444 RLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYN 503
Query: 432 VLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESS 491
+LI AGK+ EA + M + G PDL TYS L+ R +K E++ Q S
Sbjct: 504 ILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQS 563
Query: 492 GCTPDRKARQILQSAL 507
G D IL L
Sbjct: 564 GLETDVMMHNILIHGL 579
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 110/436 (25%), Positives = 187/436 (42%), Gaps = 13/436 (2%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
++N I K G +D+ + + +M+ +Y+SLI L G +A+++F E+
Sbjct: 257 THNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNEL 316
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
+ + YN +L GF + G + L +ME N +Y IL+ + G++
Sbjct: 317 DERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV-NIVSYNILIKGLLENGKI 375
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSI 258
D+ +I M +KG+ + YG I NG KA+G+++E+ G LD Y SI
Sbjct: 376 DEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASI 435
Query: 259 IDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGF 318
ID K L EA + ++M + + + N+LI + + +A +M + G
Sbjct: 436 IDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGC 495
Query: 319 YPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEE 378
P + +I L + GK+ + M + G Y+IL+ G RD +
Sbjct: 496 RPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILL-----CGLCRD-RK 549
Query: 379 CIAALKL------EGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNV 432
AL+L GL+ M IL + G + + V+ ME NLV N
Sbjct: 550 IDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNT 609
Query: 433 LINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSG 492
L+ F G A ++ M +G+ PD+++Y+T+MK + E + + G
Sbjct: 610 LMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHG 669
Query: 493 CTPDRKARQILQSALV 508
P IL A+V
Sbjct: 670 IFPTVYTWNILVRAVV 685
Score = 108 bits (271), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 107/453 (23%), Positives = 193/453 (42%), Gaps = 42/453 (9%)
Query: 94 DEAMALLAQMQAL-GFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKLRFYNI 152
D+A+ + +M+ + G P+ SY +L+ A + ++ +++F G P L+ YN+
Sbjct: 95 DQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNV 154
Query: 153 LLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINEMRSKG 212
L++ KK L M G + +Y +++ AG+LDD + +EM +G
Sbjct: 155 LIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERG 214
Query: 213 FQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIRE-MGLSLDRQIYNSIIDTFGKYGELVEA 271
+ Y +I + K A+ + + + E + + + +N +I K G + +
Sbjct: 215 VAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDC 274
Query: 272 LEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISC 331
L+++E+M+Q D+ T++SLI C AG+V KA +F ++ E+ D + T++
Sbjct: 275 LKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGG 334
Query: 332 LGELGKWDVIKKNFENMKDRGHGKIGAI--YAILVDIYGQYGRFRD--------PEECIA 381
GK IK++ E + H I Y IL+ + G+ + P + A
Sbjct: 335 FCRCGK---IKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYA 391
Query: 382 ALK----------------------LEGLQPSGSMFCILANAYAQQGLC-----EQTVKV 414
A K ++ ++ SG + A A LC E+ +
Sbjct: 392 ADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNL 451
Query: 415 LQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIR 474
++ M G+E N + N LI + EA M G P +V+Y+ L+ +
Sbjct: 452 VKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCK 511
Query: 475 AKKFHKVPEIYKQMESSGCTPDRKARQILQSAL 507
A KF + K+M +G PD K IL L
Sbjct: 512 AGKFGEASAFVKEMLENGWKPDLKTYSILLCGL 544
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 149/307 (48%), Gaps = 8/307 (2%)
Query: 191 YHVNAGRLDDTWL------IINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIR 244
YH RL +T + I+ +RS+ + + V VI Y N M +A+ + + +R
Sbjct: 46 YHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMR 105
Query: 245 EM-GLSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDV 303
E+ G + YN++++ F + + V+ +F + + P++ T+N LI+ CK +
Sbjct: 106 EIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEF 165
Query: 304 AKALELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAIL 363
KA M ++GF PD + T+I+ L + GK D + F+ M +RG Y IL
Sbjct: 166 EKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNIL 225
Query: 364 VDIYGQYGRFRDPEECIAA-LKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEG 422
+D + + + E L+ + P+ I+ + ++ G + +K+ + M+
Sbjct: 226 IDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNE 285
Query: 423 IEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVP 482
E +L + LI+ AG +A SV++ + + S D+VTY+T++ F R K +
Sbjct: 286 REKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESL 345
Query: 483 EIYKQME 489
E+++ ME
Sbjct: 346 ELWRIME 352
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 113/251 (45%)
Query: 70 NSGEEFSGNSYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTL 129
+SG +Y I CK ++EA L+ +M G +S +LI L R
Sbjct: 422 SSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLG 481
Query: 130 EADAIFQEMVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILL 189
EA +EM G P + YNIL+ G K G G S + M + G + +TY ILL
Sbjct: 482 EASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILL 541
Query: 190 DYHVNAGRLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLS 249
++D + ++ G + + ++ +I G A+ ++ + +
Sbjct: 542 CGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCT 601
Query: 250 LDRQIYNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALEL 309
+ YN++++ F K G+ A ++ M + ++PDI+++N++++ C V+ A+E
Sbjct: 602 ANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEF 661
Query: 310 FTQMQEQGFYP 320
F + G +P
Sbjct: 662 FDDARNHGIFP 672
Score = 58.9 bits (141), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 10/149 (6%)
Query: 362 ILVDIYGQYGRFRDPEECIAALK----LEGLQPSGSMFCILANAYAQQGLCEQTVKVLQL 417
+ + + YG+ P++ + K + G +P+ + L NA+ + +Q VKV L
Sbjct: 80 VALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEA---KQWVKVESL 136
Query: 418 M---EPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIR 474
E G+ PNL NVLI ++++A M G PD+ +YST++ +
Sbjct: 137 FAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAK 196
Query: 475 AKKFHKVPEIYKQMESSGCTPDRKARQIL 503
A K E++ +M G PD IL
Sbjct: 197 AGKLDDALELFDEMSERGVAPDVTCYNIL 225
Score = 38.5 bits (88), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 38/82 (46%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+YN ++ K+GD + A + M +G P ISY ++++ L A F +
Sbjct: 606 TYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDA 665
Query: 139 VCFGFNPKLRFYNILLRGFLKK 160
G P + +NIL+R + +
Sbjct: 666 RNHGIFPTVYTWNILVRAVVNR 687
>sp|Q9C6S6|PPR67_ARATH Putative pentatricopeptide repeat-containing protein At1g31840
OS=Arabidopsis thaliana GN=At1g31840 PE=2 SV=2
Length = 840
Score = 152 bits (383), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 103/429 (24%), Positives = 198/429 (46%), Gaps = 4/429 (0%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+Y I+ C+ G I EA + Q+ G PS ++Y+SLI+ G A++++M
Sbjct: 393 TYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM 452
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
+ G+ P + Y +L+ G K+GL+ R + M I N + L+D R
Sbjct: 453 IKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRF 512
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSI 258
D+ + M G + + + V+ + G ++A+ + + +MGL D Y ++
Sbjct: 513 DEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTL 572
Query: 259 IDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGF 318
ID F K+ + L++F+ MQ+ I DI N +I K + A + F + E
Sbjct: 573 IDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKM 632
Query: 319 YPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEE 378
PD + T+I L + D ++ FE +K G IL+ + +
Sbjct: 633 EPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIR 692
Query: 379 CIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFG 438
+ + +G +P+ + L + +++ E + K+ + M+ +GI P++V +++I+
Sbjct: 693 MFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLC 752
Query: 439 VAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRK 498
G+ EA +++H D + PD+V Y+ L++ + + + + +Y+ M +G PD
Sbjct: 753 KRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD-- 810
Query: 499 ARQILQSAL 507
+LQ AL
Sbjct: 811 --DLLQRAL 817
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/455 (21%), Positives = 194/455 (42%), Gaps = 35/455 (7%)
Query: 88 CKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVG--------------------- 126
CK G++D A L M+ G P I+Y++LI+ G
Sbjct: 297 CKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDV 356
Query: 127 ----RTLE----------ADAIFQEMVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMV 172
T++ A +++ M+C G +P + Y IL++G + G + +
Sbjct: 357 VVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQ 416
Query: 173 MEDMGICRNQETYEILLDYHVNAGRLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGM 232
+ G+ + TY L+D G L + + +M G+ + +YG ++ G+
Sbjct: 417 ILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGL 476
Query: 233 WKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNS 292
A+ ++ + L+ ++NS+ID + + EAL+VF M I+PD+ T+ +
Sbjct: 477 MLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTT 536
Query: 293 LIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRG 352
++R G + +AL LF +M + G PD + T+I + K + + F+ M+
Sbjct: 537 VMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNK 596
Query: 353 HGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTV 412
A+ +++ + + R D + L ++P + + Y ++
Sbjct: 597 ISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAE 656
Query: 413 KVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAF 472
++ +L++ PN V L +LI+ A+ ++ +M + G P+ VTY LM F
Sbjct: 657 RIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWF 716
Query: 473 IRAKKFHKVPEIYKQMESSGCTPDRKARQILQSAL 507
++ +++++M+ G +P + I+ L
Sbjct: 717 SKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGL 751
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/416 (22%), Positives = 188/416 (45%), Gaps = 2/416 (0%)
Query: 93 IDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKLRFYNI 152
I+ A LL+ + G P+ +++ +LI G A +F+ M G P L Y+
Sbjct: 267 IEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYST 326
Query: 153 LLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINEMRSKG 212
L+ G+ K G+LG+G +L G+ + + +D +V +G L ++ M +G
Sbjct: 327 LIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQG 386
Query: 213 FQLNSFVYGKVI-GLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGELVEA 271
N Y +I GL +D ++ +A G+ +I + G+ Y+S+ID F K G L
Sbjct: 387 ISPNVVTYTILIKGLCQDGRIY-EAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSG 445
Query: 272 LEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISC 331
++E M + PD+V + L+ K G + A+ +M Q + +F ++I
Sbjct: 446 FALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDG 505
Query: 332 LGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPS 391
L ++D K F M G A + ++ + GR + + GL+P
Sbjct: 506 WCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPD 565
Query: 392 GSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYH 451
+C L +A+ + +++ LM+ I ++ + NV+I+ + ++A ++
Sbjct: 566 ALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFN 625
Query: 452 LMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQILQSAL 507
+ + + PD+VTY+T++ + ++ + I++ ++ + P+ IL L
Sbjct: 626 NLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVL 681
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/474 (22%), Positives = 211/474 (44%), Gaps = 46/474 (9%)
Query: 69 SNSGEEFS--GNSYNKSI---------QYCCKLGDIDEAMALLAQMQALGFHPSSISYAS 117
+N G++F+ G+ ++S+ + CC+ G +D+A+ + LG S
Sbjct: 127 TNRGKDFNVLGSIRDRSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYR 186
Query: 118 LIEALASVGRT-LEADA-------------------IFQEMVCFG-FNPKLRFYNILL-R 155
++ +L R L AD + + C G L F+ +++ R
Sbjct: 187 MLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMER 246
Query: 156 GF---------LKKGL----LGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTW 202
GF + KGL + + SRLL ++ D G N T+ L++ G +D +
Sbjct: 247 GFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAF 306
Query: 203 LIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTF 262
+ M +G + + Y +I Y GM + + G+ LD +++S ID +
Sbjct: 307 DLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVY 366
Query: 263 GKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDP 322
K G+L A V+++M + I P++VT+ LI+ C+ G + +A ++ Q+ ++G P
Sbjct: 367 VKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSI 426
Query: 323 KIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAA 382
+ ++I + G +E+M G+ IY +LVD + G
Sbjct: 427 VTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVK 486
Query: 383 LKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGK 442
+ + ++ + +F L + + + ++ +KV +LM GI+P++ ++ + G+
Sbjct: 487 MLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGR 546
Query: 443 YKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPD 496
+EAL ++ M +G+ PD + Y TL+ AF + K +++ M+ + + D
Sbjct: 547 LEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISAD 600
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/409 (22%), Positives = 179/409 (43%), Gaps = 2/409 (0%)
Query: 88 CKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKL 147
CK G++ +A+ + GF +S +++ L SV + A + ++ G P +
Sbjct: 229 CK-GEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNV 286
Query: 148 RFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINE 207
+ L+ GF K+G + L VME GI + Y L+D + AG L + ++
Sbjct: 287 VTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQ 346
Query: 208 MRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGE 267
KG +L+ V+ I +Y +G A + + + G+S + Y +I + G
Sbjct: 347 ALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGR 406
Query: 268 LVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFIT 327
+ EA ++ ++ + + P IVT++SLI CK G++ L+ M + G+ PD I+
Sbjct: 407 IYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGV 466
Query: 328 IISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEG 387
++ L + G + M + ++ L+D + + RF + + + + G
Sbjct: 467 LVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYG 526
Query: 388 LQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEAL 447
++P + F + +G E+ + + M G+EP+ + LI+AF K L
Sbjct: 527 IKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGL 586
Query: 448 SVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPD 496
++ LM+ IS D+ + ++ + + + + + PD
Sbjct: 587 QLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPD 635
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 92/217 (42%)
Query: 81 NKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVC 140
N I K I++A + P ++Y ++I S+ R EA+ IF+ +
Sbjct: 605 NVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKV 664
Query: 141 FGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDD 200
F P IL+ K + R+ +M + G N TY L+D+ + ++
Sbjct: 665 TPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEG 724
Query: 201 TWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIID 260
++ + EM+ KG + Y +I G +A I + + L D Y +I
Sbjct: 725 SFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIR 784
Query: 261 TFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWH 297
+ K G LVEA ++E M + ++PD + +L ++
Sbjct: 785 GYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSEYN 821
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%)
Query: 69 SNSGEEFSGNSYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRT 128
+ G + + +Y + + K DI+ + L +MQ G PS +SY+ +I+ L GR
Sbjct: 698 AEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRV 757
Query: 129 LEADAIFQEMVCFGFNPKLRFYNILLRGFLKKGLL 163
EA IF + + P + Y IL+RG+ K G L
Sbjct: 758 DEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRL 792
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 151 bits (382), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 96/410 (23%), Positives = 192/410 (46%), Gaps = 3/410 (0%)
Query: 87 CCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPK 146
CCK A ++L ++ LG+ P + ++ +LI+ L G+ EA + MV G P
Sbjct: 136 CCKTC---FAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPD 192
Query: 147 LRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIIN 206
+ YN ++ G + G L LL ME+ + + TY ++D G +D +
Sbjct: 193 VVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFK 252
Query: 207 EMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYG 266
EM +KG + + Y ++ G W +++++ + + +N ++D F K G
Sbjct: 253 EMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEG 312
Query: 267 ELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFI 326
+L EA E++++M I P+I+T+N+L+ +C +++A + M PD F
Sbjct: 313 KLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFT 372
Query: 327 TIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLE 386
++I + + D K F N+ RG Y+ILV + Q G+ + EE +
Sbjct: 373 SLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSH 432
Query: 387 GLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEA 446
G+ P + IL + G E+ +++ + ++ ++ +VM +I GK ++A
Sbjct: 433 GVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDA 492
Query: 447 LSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPD 496
+++ + G+ P+++TY+ ++ + + + ++ME G P+
Sbjct: 493 WNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPN 542
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 175/383 (45%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+YN + C+ GD A+ LL +M+ +Y+++I++L G A ++F+EM
Sbjct: 195 TYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM 254
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
G + YN L+RG K G G+ LL M I N T+ +LLD V G+L
Sbjct: 255 ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKL 314
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSI 258
+ + EM ++G N Y ++ Y +A +++ + S D + S+
Sbjct: 315 QEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSL 374
Query: 259 IDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGF 318
I + + + ++VF + + + + VT++ L++ C++G + A ELF +M G
Sbjct: 375 IKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGV 434
Query: 319 YPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEE 378
PD + ++ L + GK + + FE+++ +Y +++ + G+ D
Sbjct: 435 LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWN 494
Query: 379 CIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFG 438
+L +G++P+ + ++ + ++G + +L+ ME +G PN N LI A
Sbjct: 495 LFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHL 554
Query: 439 VAGKYKEALSVYHLMKDIGISPD 461
G + + MK G S D
Sbjct: 555 RDGDLTASAKLIEEMKSCGFSAD 577
Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 178/379 (46%), Gaps = 2/379 (0%)
Query: 130 EADAIFQEMVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILL 189
+A A+FQEM+ P L ++ + L +E GI N T I++
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130
Query: 190 DYHVNAGRLDDTWLIINEMRSKGFQLNSFVYGKVI-GLYRDNGMWKKAVGIVEEIREMGL 248
+ + + ++ ++ G++ ++ + +I GL+ + G +AV +V+ + E G
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLE-GKVSEAVVLVDRMVENGC 189
Query: 249 SLDRQIYNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALE 308
D YNSI++ + G+ AL++ KM++ +++ D+ T++++I C+ G + A+
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 309 LFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYG 368
LF +M+ +G + +++ L + GKW+ ++M R + +L+D++
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 369 QYGRFRDPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLV 428
+ G+ ++ E + G+ P+ + L + Y Q + +L LM P++V
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369
Query: 429 MLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQM 488
LI + + + + + V+ + G+ + VTYS L++ F ++ K E++++M
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 429
Query: 489 ESSGCTPDRKARQILQSAL 507
S G PD IL L
Sbjct: 430 VSHGVLPDVMTYGILLDGL 448
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 141/315 (44%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+YN ++ CK G ++ LL M + P+ I++ L++ G+ EA+ +++EM
Sbjct: 265 TYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEM 324
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
+ G +P + YN L+ G+ + L + +L +M + T+ L+ + R+
Sbjct: 325 ITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRV 384
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSI 258
DD + + +G N+ Y ++ + +G K A + +E+ G+ D Y +
Sbjct: 385 DDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGIL 444
Query: 259 IDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGF 318
+D G+L +ALE+FE +Q+ + IV + ++I CK G V A LF + +G
Sbjct: 445 LDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGV 504
Query: 319 YPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEE 378
P+ + +IS L + G M++ G+ Y L+ + + G +
Sbjct: 505 KPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAK 564
Query: 379 CIAALKLEGLQPSGS 393
I +K G S
Sbjct: 565 LIEEMKSCGFSADAS 579
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 116/465 (24%), Positives = 204/465 (43%), Gaps = 36/465 (7%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+YN I G DEA +LL + +A G PS I+Y ++ L +G+ EA +F+EM
Sbjct: 310 AYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM 369
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEIL---------- 188
P L YNIL+ + G L L M+ G+ N T I+
Sbjct: 370 K-KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKL 428
Query: 189 ---------LDYHV----------------NAGRLDDTWLIINEMRSKGFQLNSFVYGKV 223
+DY V GR+DD + + +M + NS VY +
Sbjct: 429 DEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSL 488
Query: 224 IGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQESI 283
I + ++G + I +++ S D Q+ N+ +D K GE + +FE+++
Sbjct: 489 IKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRF 548
Query: 284 RPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKK 343
PD +++ LI KAG + ELF M+EQG D + + +I + GK + +
Sbjct: 549 VPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQ 608
Query: 344 NFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFCILANAYA 403
E MK +G Y ++D + R + K + ++ + ++ L + +
Sbjct: 609 LLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFG 668
Query: 404 QQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLV 463
+ G ++ +L+ + +G+ PNL N L++A A + EAL + MK++ +P+ V
Sbjct: 669 KVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQV 728
Query: 464 TYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQILQSALV 508
TY L+ + +KF+K +++M+ G P + + S L
Sbjct: 729 TYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLA 773
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/465 (23%), Positives = 203/465 (43%), Gaps = 39/465 (8%)
Query: 77 GNSYNKSIQY---CCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADA 133
G S N I+ C K + E ++ M+ F P+ +Y +LI A ++V +
Sbjct: 130 GPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLT 189
Query: 134 IFQEMVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHV 193
+FQ+M G+ P + + L+RGF K+G + LL M+ + + Y + +D
Sbjct: 190 LFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFG 249
Query: 194 NAGRLDDTWLIINEMRSKGFQLNSFVYGKVIGL--------------------------- 226
G++D W +E+ + G + + Y +IG+
Sbjct: 250 KVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTY 309
Query: 227 --------YRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGELVEALEVFEKM 278
Y G + +A ++E R G YN I+ K G++ EAL+VFE+M
Sbjct: 310 AYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM 369
Query: 279 QQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKW 338
++++ P++ T+N LI C+AG + A EL MQ+ G +P+ + ++ L + K
Sbjct: 370 KKDAA-PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKL 428
Query: 339 DVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFCIL 398
D FE M + + L+D G+ GR D + + + + ++ L
Sbjct: 429 DEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSL 488
Query: 399 ANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGI 458
+ G E K+ + M + P+L +LN ++ AG+ ++ +++ +K
Sbjct: 489 IKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRF 548
Query: 459 SPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQIL 503
PD +YS L+ I+A ++ E++ M+ GC D +A I+
Sbjct: 549 VPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIV 593
Score = 135 bits (340), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 106/466 (22%), Positives = 210/466 (45%), Gaps = 40/466 (8%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+Y I CK +DEA+ + ++ P + +Y ++I S G+ EA ++ +
Sbjct: 275 TYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQ 334
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDM--GICRNQETYEILLDYHVNAG 196
G P + YN +L K G + L V E+M N TY IL+D AG
Sbjct: 335 RAKGSIPSVIAYNCILTCLRKMGKV---DEALKVFEEMKKDAAPNLSTYNILIDMLCRAG 391
Query: 197 RLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYN 256
+LD + + + M+ G N ++ + +A + EE+ + D +
Sbjct: 392 KLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFC 451
Query: 257 SIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIR--------------------W 296
S+ID GK G + +A +V+EKM R + + + SLI+
Sbjct: 452 SLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQ 511
Query: 297 HC---------------KAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWDVI 341
+C KAG+ K +F +++ + F PD + + +I L + G +
Sbjct: 512 NCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANET 571
Query: 342 KKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFCILANA 401
+ F +MK++G Y I++D + + G+ + + +K +G +P+ + + +
Sbjct: 572 YELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDG 631
Query: 402 YAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPD 461
A+ ++ + + + + IE N+V+ + LI+ FG G+ EA + + G++P+
Sbjct: 632 LAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPN 691
Query: 462 LVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQILQSAL 507
L T+++L+ A ++A++ ++ ++ M+ CTP++ IL + L
Sbjct: 692 LYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGL 737
Score = 123 bits (308), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 108/515 (20%), Positives = 205/515 (39%), Gaps = 70/515 (13%)
Query: 51 GYAYSLGNKNLSIKSPDGSNSGEEFSGNSYNKSIQYCCKLGDIDE-AMALLAQMQALGFH 109
G+A + KNLS S +G N + ++ +++ C + + + + AL F
Sbjct: 3 GFARTKFCKNLSSLSDNGENHEKPYTFEGNRQTVNDICNVLETGPWGPSAENTLSALSFK 62
Query: 110 PSSISYASLIEALASVGRTLE---------------------------------ADAIFQ 136
P ++ L V R +E D I
Sbjct: 63 PQPEFVIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILG 122
Query: 137 EMVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAG 196
EM GF P + ++ G +K L G ++ +M Y L+
Sbjct: 123 EMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVN 182
Query: 197 RLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYN 256
D + +M+ G++ ++ +I + G A+ +++E++ L D +YN
Sbjct: 183 HSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYN 242
Query: 257 SIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQE- 315
ID+FGK G++ A + F +++ ++PD VT+ S+I CKA + +A+E+F +++
Sbjct: 243 VCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKN 302
Query: 316 ----------------------------------QGFYPDPKIFITIISCLGELGKWDVI 341
+G P + I++CL ++GK D
Sbjct: 303 RRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEA 362
Query: 342 KKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFCILANA 401
K FE MK + + Y IL+D+ + G+ E +++ GL P+ I+ +
Sbjct: 363 LKVFEEMKKDAAPNL-STYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDR 421
Query: 402 YAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPD 461
+ ++ + + M+ + P+ + LI+ G G+ +A VY M D +
Sbjct: 422 LCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTN 481
Query: 462 LVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPD 496
+ Y++L+K F + +IYK M + C+PD
Sbjct: 482 SIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPD 516
Score = 122 bits (306), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 88/407 (21%), Positives = 181/407 (44%), Gaps = 1/407 (0%)
Query: 89 KLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKLR 148
K G +D A++LL +M++ + Y I++ VG+ A F E+ G P
Sbjct: 215 KEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEV 274
Query: 149 FYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINEM 208
Y ++ K L + +E Y ++ + +AG+ D+ + ++
Sbjct: 275 TYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQ 334
Query: 209 RSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGEL 268
R+KG + Y ++ R G +A+ + EE+++ + + YN +ID + G+L
Sbjct: 335 RAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK-DAAPNLSTYNILIDMLCRAGKL 393
Query: 269 VEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITI 328
A E+ + MQ+ + P++ T N ++ CK+ + +A +F +M + PD F ++
Sbjct: 394 DTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSL 453
Query: 329 ISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGL 388
I LG++G+ D K +E M D +Y L+ + +GR D + + +
Sbjct: 454 IDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNC 513
Query: 389 QPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALS 448
P + + + G E+ + + ++ P+ ++LI+ AG E
Sbjct: 514 SPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYE 573
Query: 449 VYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTP 495
+++ MK+ G D Y+ ++ F + K +K ++ ++M++ G P
Sbjct: 574 LFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEP 620
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 148/334 (44%)
Query: 89 KLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKLR 148
K G+ ++ A+ +++A F P + SY+ LI L G E +F M G R
Sbjct: 529 KAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTR 588
Query: 149 FYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINEM 208
YNI++ GF K G + +LL M+ G TY ++D RLD+ +++ E
Sbjct: 589 AYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 648
Query: 209 RSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGEL 268
+SK +LN +Y +I + G +A I+EE+ + GL+ + +NS++D K E+
Sbjct: 649 KSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEI 708
Query: 269 VEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITI 328
EAL F+ M++ P+ VT+ LI CK KA + +MQ+QG P + T+
Sbjct: 709 NEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTM 768
Query: 329 ISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGL 388
IS L + G F+ K G A Y +++ R D + GL
Sbjct: 769 ISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL 828
Query: 389 QPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEG 422
+L + + EQ V ++ G
Sbjct: 829 PIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETG 862
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 117/259 (45%), Gaps = 10/259 (3%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+YN I CK G +++A LL +M+ GF P+ ++Y S+I+ LA + R EA +F+E
Sbjct: 589 AYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 648
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
+ Y+ L+ GF K G + +L + G+ N T+ LLD V A +
Sbjct: 649 KSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEI 708
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWK-----KAVGIVEEIREMGLSLDRQ 253
++ + M+ N YG +I NG+ K KA +E+++ G+
Sbjct: 709 NEALVCFQSMKELKCTPNQVTYGILI-----NGLCKVRKFNKAFVFWQEMQKQGMKPSTI 763
Query: 254 IYNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQM 313
Y ++I K G + EA +F++ + PD +N++I A LF +
Sbjct: 764 SYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEET 823
Query: 314 QEQGFYPDPKIFITIISCL 332
+ +G K + ++ L
Sbjct: 824 RRRGLPIHNKTCVVLLDTL 842
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 70/169 (41%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
++N + K +I+EA+ M+ L P+ ++Y LI L V + +A +QEM
Sbjct: 694 TWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEM 753
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
G P Y ++ G K G + L + G + Y +++ N R
Sbjct: 754 QKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRA 813
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMG 247
D + + E R +G +++ ++ N ++A + +RE G
Sbjct: 814 MDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETG 862
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 149 bits (375), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 101/417 (24%), Positives = 190/417 (45%), Gaps = 38/417 (9%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
SYN I C+ A++++ +M G+ P ++ +SLI R +A + +M
Sbjct: 106 SYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM 165
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
GF P + YN ++ G K GL+ L ME G+ + TY L+ +GR
Sbjct: 166 EEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRW 225
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSI 258
D ++ +M + N + VI ++ G + +A+ + EE+ + D YNS+
Sbjct: 226 SDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSL 285
Query: 259 IDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGF 318
I+ +G + EA ++ + M + PD+VT+N+LI CK+ V + +LF +M ++G
Sbjct: 286 INGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGL 345
Query: 319 YPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEE 378
D + TII + G+ D ++ F M R + + Y+IL +YG +R
Sbjct: 346 VGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIR---TYSIL--LYGLCMNWR---- 396
Query: 379 CIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFG 438
E+ + + + M+ IE ++ N++I+
Sbjct: 397 -----------------------------VEKALVLFENMQKSEIELDITTYNIVIHGMC 427
Query: 439 VAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTP 495
G ++A ++ + G+ PD+V+Y+T++ F R +++ K +Y++M+ G P
Sbjct: 428 KIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 133/277 (48%)
Query: 220 YGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGELVEALEVFEKMQ 279
+ KV+ + + + + + G+ D YN +I+ + V AL V KM
Sbjct: 72 FSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMM 131
Query: 280 QESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWD 339
+ PD+VT +SLI C+ V A++L ++M+E GF PD I+ TII ++G +
Sbjct: 132 KFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVN 191
Query: 340 VIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFCILA 399
+ F+ M+ G Y LV GR+ D + + + + P+ F +
Sbjct: 192 DAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVI 251
Query: 400 NAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGIS 459
+ + ++G + +K+ + M ++P++ N LIN + G+ EA + LM G
Sbjct: 252 DVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCL 311
Query: 460 PDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPD 496
PD+VTY+TL+ F ++K+ + +++++M G D
Sbjct: 312 PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGD 348
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 143/300 (47%), Gaps = 3/300 (1%)
Query: 204 IINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFG 263
+ + M G + + Y VI + A+ +V ++ + G D +S+I+ F
Sbjct: 91 LFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFC 150
Query: 264 KYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPK 323
+ + +A+++ KM++ RPD+V +N++I CK G V A+ELF +M+ G D
Sbjct: 151 QGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAV 210
Query: 324 IFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAAL 383
+ ++++ L G+W + +M R + ++D++ + G+F + + +
Sbjct: 211 TYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEM 270
Query: 384 KLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKY 443
+ P + L N G ++ ++L LM +G P++V N LIN F + +
Sbjct: 271 TRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRV 330
Query: 444 KEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQIL 503
E ++ M G+ D +TY+T+++ + +A + EI+ +M+S P+ + IL
Sbjct: 331 DEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSIL 387
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 106/229 (46%)
Query: 268 LVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFIT 327
L E +++F KM Q P IV ++ ++ K+ + + LF M+ G D +
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 328 IISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEG 387
+I+CL ++ + M G+ + L++ + Q R D + ++ ++ G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 388 LQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEAL 447
+P ++ + + + GL V++ ME +G+ + V N L+ +G++ +A
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 448 SVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPD 496
+ M I P+++T++ ++ F++ KF + ++Y++M PD
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPD 278
Score = 38.5 bits (88), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 33/65 (50%)
Query: 74 EFSGNSYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADA 133
E +YN I CK+G++++A L + G P +SY ++I + ++D
Sbjct: 413 ELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDL 472
Query: 134 IFQEM 138
++++M
Sbjct: 473 LYRKM 477
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 149 bits (375), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 178/392 (45%), Gaps = 1/392 (0%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+YN I CK GD++ A L +M+ G P +++Y S+I+ VGR + F+EM
Sbjct: 264 TYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEM 323
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
P + YN L+ F K G L +G M+ G+ N +Y L+D G +
Sbjct: 324 KDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMM 383
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSI 258
+MR G N + Y +I G A + E+ ++G+ + Y ++
Sbjct: 384 QQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTAL 443
Query: 259 IDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGF 318
ID + EA E+F KM + P++ ++N+LI KA ++ +ALEL +++ +G
Sbjct: 444 IDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGI 503
Query: 319 YPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEE 378
PD ++ T I L L K + K MK+ G IY L+D Y + G +
Sbjct: 504 KPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLH 563
Query: 379 CIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPE-GIEPNLVMLNVLINAF 437
+ +K ++ + FC+L + + L + V + + G++ N + +I+
Sbjct: 564 LLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGL 623
Query: 438 GVAGKYKEALSVYHLMKDIGISPDLVTYSTLM 469
+ + A +++ M G+ PD Y++LM
Sbjct: 624 CKDNQVEAATTLFEQMVQKGLVPDRTAYTSLM 655
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 167/366 (45%)
Query: 110 PSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKLRFYNILLRGFLKKGLLGLGSRL 169
P + +L L +G EA F +M F PK R N LL F K G R
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 170 LMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRD 229
M G TY I++D G ++ + EM+ +G ++ Y +I +
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 230 NGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVT 289
G V EE+++M D YN++I+ F K+G+L LE + +M+ ++P++V+
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 290 WNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMK 349
+++L+ CK G + +A++ + M+ G P+ + ++I ++G + M
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 429
Query: 350 DRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFCILANAYAQQGLCE 409
G Y L+D R ++ EE + G+ P+ + + L + + + +
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 489
Query: 410 QTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLM 469
+ +++L ++ GI+P+L++ I K + A V + MK+ GI + + Y+TLM
Sbjct: 490 RALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLM 549
Query: 470 KAFIRA 475
A+ ++
Sbjct: 550 DAYFKS 555
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/410 (24%), Positives = 170/410 (41%), Gaps = 50/410 (12%)
Query: 102 QMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMV-----CFGFNPKLRFYNILLRG 156
M GF S SY + L +A+++ +EMV C F+ N+ + G
Sbjct: 132 SMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPG 191
Query: 157 F----------LKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIIN 206
F + G+L + M+ + + LL G+ DD
Sbjct: 192 FGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFK 251
Query: 207 EMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYG 266
+M G + F Y +I G + A G+ EE++ GL D YNS+ID FGK G
Sbjct: 252 DMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVG 311
Query: 267 ELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFI 326
L + + FE+M+ PD++T+N+LI CK G + LE + +M+ G P+
Sbjct: 312 RLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPN----- 366
Query: 327 TIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLE 386
++S Y+ LVD + + G + + ++
Sbjct: 367 -VVS-----------------------------YSTLVDAFCKEGMMQQAIKFYVDMRRV 396
Query: 387 GLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEA 446
GL P+ + L +A + G ++ M G+E N+V LI+ A + KEA
Sbjct: 397 GLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEA 456
Query: 447 LSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPD 496
++ M G+ P+L +Y+ L+ F++AK + E+ +++ G PD
Sbjct: 457 EELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPD 506
Score = 90.1 bits (222), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 124/263 (47%), Gaps = 3/263 (1%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
SYN I K ++D A+ LL +++ G P + Y + I L S+ + A + EM
Sbjct: 474 SYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEM 533
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
G Y L+ + K G G LL M+++ I T+ +L+D +
Sbjct: 534 KECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLV 593
Query: 199 DDTWLIINEMRSK-GFQLNSFVYGKVI-GLYRDNGMWKKAVGIVEEIREMGLSLDRQIYN 256
N + + G Q N+ ++ +I GL +DN + + A + E++ + GL DR Y
Sbjct: 594 SKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQV-EAATTLFEQMVQKGLVPDRTAYT 652
Query: 257 SIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQ 316
S++D K G ++EAL + +KM + ++ D++ + SL+ + KA +M +
Sbjct: 653 SLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGE 712
Query: 317 GFYPDPKIFITIISCLGELGKWD 339
G +PD + I+++ ELG D
Sbjct: 713 GIHPDEVLCISVLKKHYELGCID 735
Score = 86.3 bits (212), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 126/301 (41%), Gaps = 9/301 (2%)
Query: 53 AYSLGNKNLSIKSPDGSNSGEEFSGNSYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSS 112
A+ LGN+ L + G E++ +Y I C + EA L +M G P+
Sbjct: 421 AFRLGNEMLQV--------GVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNL 472
Query: 113 ISYASLIEALASVGRTLEADAIFQEMVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMV 172
SY +LI A + E+ G P L Y + G + ++
Sbjct: 473 ASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNE 532
Query: 173 MEDMGICRNQETYEILLDYHVNAGRLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGM 232
M++ GI N Y L+D + +G + +++EM+ ++ + +I N +
Sbjct: 533 MKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKL 592
Query: 233 WKKAVGIVEEI-REMGLSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWN 291
KAV I + GL + I+ ++ID K ++ A +FE+M Q+ + PD +
Sbjct: 593 VSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYT 652
Query: 292 SLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDR 351
SL+ + K G+V +AL L +M E G D + +++ L + + E M
Sbjct: 653 SLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGE 712
Query: 352 G 352
G
Sbjct: 713 G 713
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/425 (23%), Positives = 205/425 (48%)
Query: 72 GEEFSGNSYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEA 131
G ++Y+ I K + D A L+ +M + G + Y I ++ G +A
Sbjct: 307 GVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKA 366
Query: 132 DAIFQEMVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDY 191
A+F M+ G P+ + Y L+ G+ ++ + G LL+ M+ I + TY ++
Sbjct: 367 KALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKG 426
Query: 192 HVNAGRLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLD 251
++G LD + I+ EM + G + N +Y +I + N + A+ +++E++E G++ D
Sbjct: 427 MCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPD 486
Query: 252 RQIYNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFT 311
YNS+I K + EA +M + ++P+ T+ + I + +A + A A +
Sbjct: 487 IFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVK 546
Query: 312 QMQEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYG 371
+M+E G P+ + +I+ + GK + +M D+G Y +L++ +
Sbjct: 547 EMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKND 606
Query: 372 RFRDPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLN 431
+ D EE ++ +G+ P + +L N +++ G ++ + M EG+ PN+++ N
Sbjct: 607 KVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYN 666
Query: 432 VLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESS 491
+L+ F +G+ ++A + M G+ P+ VTY T++ + ++ + ++ +M+
Sbjct: 667 MLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLK 726
Query: 492 GCTPD 496
G PD
Sbjct: 727 GLVPD 731
Score = 147 bits (372), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/460 (25%), Positives = 196/460 (42%), Gaps = 43/460 (9%)
Query: 80 YNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMV 139
YN I K +DEA + L +M G P++ +Y + I AD +EM
Sbjct: 490 YNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMR 549
Query: 140 CFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLD 199
G P L+ + KKG + M D GI + +TY +L++ ++D
Sbjct: 550 ECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVD 609
Query: 200 DTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSII 259
D I EMR KG + F YG +I + G +KA I +E+ E GL+ + IYN ++
Sbjct: 610 DAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLL 669
Query: 260 DTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFY 319
F + GE+ +A E+ ++M + + P+ VT+ ++I +CK+GD+A+A LF +M+ +G
Sbjct: 670 GGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLV 729
Query: 320 PDPKIFITI----------------------------------ISCLGELGKWDVIKKNF 345
PD ++ T+ I+ + + GK ++ +
Sbjct: 730 PDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVL 789
Query: 346 ENMKDRGHGKIG----AIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFCILANA 401
+ D + G Y I++D + G +E ++ L P+ + L N
Sbjct: 790 NRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNG 849
Query: 402 YAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLM-----KDI 456
Y + G + V GIEP+ +M +V+INAF G +AL + M D
Sbjct: 850 YDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDD 909
Query: 457 GISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPD 496
G + T L+ F + + ++ + M PD
Sbjct: 910 GCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPD 949
Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/418 (23%), Positives = 195/418 (46%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+Y+ I CK+ +++A +LL +M +LG + +Y+ LI+ L A + EM
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEM 338
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
V G N K Y+ + K+G++ L M G+ + Y L++ + +
Sbjct: 339 VSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNV 398
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSI 258
+ ++ EM+ + ++ + YG V+ +G A IV+E+ G + IY ++
Sbjct: 399 RQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTL 458
Query: 259 IDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGF 318
I TF + +A+ V ++M+++ I PDI +NSLI KA + +A +M E G
Sbjct: 459 IKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGL 518
Query: 319 YPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEE 378
P+ + IS E ++ K + M++ G + L++ Y + G+ +
Sbjct: 519 KPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACS 578
Query: 379 CIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFG 438
++ +G+ + +L N + + ++ + M +GI P++ VLIN F
Sbjct: 579 AYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFS 638
Query: 439 VAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPD 496
G ++A S++ M + G++P+++ Y+ L+ F R+ + K E+ +M G P+
Sbjct: 639 KLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPN 696
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 174/374 (46%)
Query: 77 GNSYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQ 136
+Y I+ C+ ++ + LL +M+ S +Y ++++ + S G A I +
Sbjct: 382 AQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVK 441
Query: 137 EMVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAG 196
EM+ G P + Y L++ FL+ G R+L M++ GI + Y L+ A
Sbjct: 442 EMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAK 501
Query: 197 RLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYN 256
R+D+ + EM G + N+F YG I Y + + A V+E+RE G+ ++ +
Sbjct: 502 RMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCT 561
Query: 257 SIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQ 316
+I+ + K G+++EA + M + I D T+ L+ K V A E+F +M+ +
Sbjct: 562 GLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGK 621
Query: 317 GFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDP 376
G PD + +I+ +LG F+ M + G IY +L+ + + G
Sbjct: 622 GIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKA 681
Query: 377 EECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINA 436
+E + + ++GL P+ +C + + Y + G + ++ M+ +G+ P+ + L++
Sbjct: 682 KELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDG 741
Query: 437 FGVAGKYKEALSVY 450
+ A++++
Sbjct: 742 CCRLNDVERAITIF 755
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 166/372 (44%), Gaps = 3/372 (0%)
Query: 128 TLEADAIF---QEMVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQET 184
TL D + M+C G P Y++L+ G K L LL+ M+ +G+ + T
Sbjct: 255 TLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHT 314
Query: 185 YEILLDYHVNAGRLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIR 244
Y +L+D + D +++EM S G + ++Y I + G+ +KA + + +
Sbjct: 315 YSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMI 374
Query: 245 EMGLSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVA 304
GL Q Y S+I+ + + + + E+ +M++ +I T+ ++++ C +GD+
Sbjct: 375 ASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLD 434
Query: 305 KALELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILV 364
A + +M G P+ I+ T+I + ++ + + MK++G Y L+
Sbjct: 435 GAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLI 494
Query: 365 DIYGQYGRFRDPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIE 424
+ R + + + GL+P+ + + Y + K ++ M G+
Sbjct: 495 IGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVL 554
Query: 425 PNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEI 484
PN V+ LIN + GK EA S Y M D GI D TY+ LM + K EI
Sbjct: 555 PNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEI 614
Query: 485 YKQMESSGCTPD 496
+++M G PD
Sbjct: 615 FREMRGKGIAPD 626
Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 104/466 (22%), Positives = 192/466 (41%), Gaps = 32/466 (6%)
Query: 64 KSPDGSNSGEEFSGNSYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALA 123
KS DG G F G Y K G I+EA+ + + L P L++AL
Sbjct: 147 KSDDGVLFGILFDG--------YIAK-GYIEEAVFVFSSSMGLELVPRLSRCKVLLDALL 197
Query: 124 SVGRTLEADAIFQEMVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLL------------- 170
R +++ MV ++ Y++L+ + G + LG +L
Sbjct: 198 RWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLN 257
Query: 171 ----MVMEDMGICRN----QETYEILLDYHVNAGRLDDTWLIINEMRSKGFQLNSFVYGK 222
+ +++ IC+ + TY++L+D RL+D ++ EM S G L++ Y
Sbjct: 258 VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSL 317
Query: 223 VI-GLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQE 281
+I GL + A G+V E+ G+++ +Y+ I K G + +A +F+ M
Sbjct: 318 LIDGLLKGRNA-DAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIAS 376
Query: 282 SIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWDVI 341
+ P + SLI +C+ +V + EL +M+++ P + T++ + G D
Sbjct: 377 GLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGA 436
Query: 342 KKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFCILANA 401
+ M G IY L+ + Q RF D + +K +G+ P + L
Sbjct: 437 YNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIG 496
Query: 402 YAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPD 461
++ ++ L M G++PN I+ + A ++ A M++ G+ P+
Sbjct: 497 LSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPN 556
Query: 462 LVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQILQSAL 507
V + L+ + + K + Y+ M G D K +L + L
Sbjct: 557 KVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGL 602
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 119/298 (39%), Gaps = 45/298 (15%)
Query: 80 YNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMV 139
YN + C+ G+I++A LL +M G HP++++Y ++I+ G EA +F EM
Sbjct: 665 YNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK 724
Query: 140 CFGFNPKLRFYNILLRG----------------------------------FLKKGLLGL 165
G P Y L+ G K G L
Sbjct: 725 LKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTEL 784
Query: 166 GSRLLMVMEDMGICR----NQETYEILLDYHVNAGRLDDTWLIINEMRSKGFQLNSFVYG 221
+ +L + D R N TY I++DY G L+ + ++M++ Y
Sbjct: 785 KTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYT 844
Query: 222 KVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQE 281
++ Y G + + +E G+ D +Y+ II+ F K G +AL + ++M +
Sbjct: 845 SLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAK 904
Query: 282 SIRPD-----IVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITII--SCL 332
+ D I T +L+ K G++ A ++ M + PD I +I SC+
Sbjct: 905 NAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCI 962
Score = 62.4 bits (150), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+YN I Y CK G+++ A L QMQ P+ I+Y SL+ +GR E +F E
Sbjct: 807 TYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEA 866
Query: 139 VCFGFNPKLRFYNILLRGFLKKGL 162
+ G P Y++++ FLK+G+
Sbjct: 867 IAAGIEPDHIMYSVIINAFLKEGM 890
>sp|Q9S7Q2|PP124_ARATH Pentatricopeptide repeat-containing protein At1g74850,
chloroplastic OS=Arabidopsis thaliana GN=PTAC2 PE=2 SV=1
Length = 862
Score = 147 bits (372), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 191/410 (46%), Gaps = 4/410 (0%)
Query: 91 GDIDEAMALLAQMQ-ALGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKLRF 149
GD ++ L MQ + P+ Y +I L G + +F EM G + +
Sbjct: 119 GDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFS 178
Query: 150 YNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLI--INE 207
Y L+ + + G LL M++ I + TY +++ G LD L+ E
Sbjct: 179 YTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGG-LDWEGLLGLFAE 237
Query: 208 MRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGE 267
MR +G Q + Y ++ G+ +A + + + G+ D Y+ +++TFGK
Sbjct: 238 MRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRR 297
Query: 268 LVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFIT 327
L + ++ +M PDI ++N L+ + K+G + +A+ +F QMQ G P+ +
Sbjct: 298 LEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSV 357
Query: 328 IISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEG 387
+++ G+ G++D +++ F MK A Y IL++++G+ G F++ + E
Sbjct: 358 LLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEEN 417
Query: 388 LQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEAL 447
++P + + A + GL E K+LQ M I P+ +I AFG A Y+EAL
Sbjct: 418 IEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEAL 477
Query: 448 SVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDR 497
++ M ++G +P + T+ +L+ +F R + I ++ SG +R
Sbjct: 478 VAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNR 527
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 187/418 (44%), Gaps = 1/418 (0%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEAD-AIFQE 137
SY I + G + ++ LL +M+ PS ++Y ++I A A G E +F E
Sbjct: 178 SYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAE 237
Query: 138 MVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGR 197
M G P + YN LL +GL + M D GI + TY L++ R
Sbjct: 238 MRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRR 297
Query: 198 LDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNS 257
L+ ++ EM S G + Y ++ Y +G K+A+G+ +++ G + + Y+
Sbjct: 298 LEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSV 357
Query: 258 IIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQG 317
+++ FG+ G + ++F +M+ + PD T+N LI + G + + LF M E+
Sbjct: 358 LLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEEN 417
Query: 318 FYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPE 377
PD + + II G+ G + +K + M Y +++ +GQ + +
Sbjct: 418 IEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEAL 477
Query: 378 ECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAF 437
+ G PS F L ++A+ GL +++ +L + GI N N I A+
Sbjct: 478 VAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAY 537
Query: 438 GVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTP 495
GK++EA+ Y M+ PD T ++ + A+ + E +++M++S P
Sbjct: 538 KQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILP 595
Score = 135 bits (341), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 184/414 (44%), Gaps = 1/414 (0%)
Query: 79 SYNKSIQYCCKLG-DIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQE 137
+YN I C + G D + + L A+M+ G P ++Y +L+ A A G EA+ +F+
Sbjct: 213 TYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRT 272
Query: 138 MVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGR 197
M G P L Y+ L+ F K L LL M G + +Y +LL+ + +G
Sbjct: 273 MNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGS 332
Query: 198 LDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNS 257
+ + + ++M++ G N+ Y ++ L+ +G + + E++ D YN
Sbjct: 333 IKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNI 392
Query: 258 IIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQG 317
+I+ FG+ G E + +F M +E+I PD+ T+ +I K G A ++ M
Sbjct: 393 LIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTAND 452
Query: 318 FYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPE 377
P K + +I G+ ++ F M + G + L+ + + G ++ E
Sbjct: 453 IVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESE 512
Query: 378 ECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAF 437
++ L G+ + F AY Q G E+ VK ME +P+ L +++ +
Sbjct: 513 AILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVY 572
Query: 438 GVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESS 491
A E + MK I P ++ Y ++ + + +++ V E+ ++M S+
Sbjct: 573 SFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSN 626
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 109/208 (52%), Gaps = 2/208 (0%)
Query: 301 GDVAKALELFTQMQEQGF-YPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAI 359
GD ++L LF MQ Q + P+ I+ +IS LG G D + F+ M +G +
Sbjct: 119 GDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFS 178
Query: 360 YAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFCILANAYAQQGL-CEQTVKVLQLM 418
Y L++ YG+ GR+ E + +K E + PS + + NA A+ GL E + + M
Sbjct: 179 YTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEM 238
Query: 419 EPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKF 478
EGI+P++V N L++A + G EA V+ M D GI PDL TYS L++ F + ++
Sbjct: 239 RHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRL 298
Query: 479 HKVPEIYKQMESSGCTPDRKARQILQSA 506
KV ++ +M S G PD + +L A
Sbjct: 299 EKVCDLLGEMASGGSLPDITSYNVLLEA 326
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/412 (22%), Positives = 164/412 (39%), Gaps = 40/412 (9%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
SYN ++ K G I EAM + QMQA G P++ +Y+ L+ GR + +F EM
Sbjct: 319 SYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEM 378
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
+P YNIL+ F + G L M + I + ETYE ++ G
Sbjct: 379 KSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLH 438
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVI------GLYRD----------------------- 229
+D I+ M + +S Y VI LY +
Sbjct: 439 EDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSL 498
Query: 230 ------NGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQESI 283
G+ K++ I+ + + G+ +R +N+ I+ + + G+ EA++ + M++
Sbjct: 499 LYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRC 558
Query: 284 RPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKK 343
PD T +++ + A V + E F +M+ P + +++ G+ +WD + +
Sbjct: 559 DPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNE 618
Query: 344 NFENMKDRGHGKIGAIYAILVD-IYGQYGRFRDPEECIAALKLEGLQPSGSMFCILANAY 402
E M I + ++ Y ++ E + L EG + L +A
Sbjct: 619 LLEEMLSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDAL 678
Query: 403 AQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGV----AGKYKEALSVY 450
G E+ +VL G+ P L N L+ + V G ALSV+
Sbjct: 679 WWLGQKERAARVLNEATKRGLFPELFRKNKLVWSVDVHRMSEGGMYTALSVW 730
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/417 (24%), Positives = 198/417 (47%), Gaps = 2/417 (0%)
Query: 92 DIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKLRFYN 151
++D+A+ L M PS I ++ L+ A+A + + + ++M G + L YN
Sbjct: 58 ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117
Query: 152 ILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINEMRSK 211
IL+ F + L L LL M +G + T LL+ + R+ D ++++M
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177
Query: 212 GFQLNSFVYGKVI-GLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGELVE 270
G++ ++ + +I GL+ N +AV +++ + + G D Y ++++ K G+
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKA-SEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDL 236
Query: 271 ALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIIS 330
AL + KM+ I ++V ++++I CK AL LFT+M+ +G P+ + ++IS
Sbjct: 237 ALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 296
Query: 331 CLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQP 390
CL G+W + +M +R ++ L+D + + G+ E+ + + P
Sbjct: 297 CLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDP 356
Query: 391 SGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVY 450
+ + L N + + ++L+LM + PN+V N LIN F A + + + ++
Sbjct: 357 NIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELF 416
Query: 451 HLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQILQSAL 507
M G+ + VTY+TL+ F +A+ ++KQM S G P+ IL L
Sbjct: 417 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGL 473
Score = 125 bits (314), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 93/417 (22%), Positives = 187/417 (44%)
Query: 80 YNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMV 139
++K + K+ D ++ +M+ LG + +Y LI R A A+ +M+
Sbjct: 81 FSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMM 140
Query: 140 CFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLD 199
G+ P + N LL GF + L+ M +MG + T+ L+ +
Sbjct: 141 KLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKAS 200
Query: 200 DTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSII 259
+ +I+ M +G Q + YG V+ G A+ ++ ++ + + IY+++I
Sbjct: 201 EAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVI 260
Query: 260 DTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFY 319
D+ KY +AL +F +M+ + +RP+++T++SLI C G + A L + M E+
Sbjct: 261 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKIN 320
Query: 320 PDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEEC 379
P+ F +I + GK +K +E M R Y+ L++ + R + ++
Sbjct: 321 PNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQM 380
Query: 380 IAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGV 439
+ + + P+ + L N + + ++ +++ + M G+ N V LI+ F
Sbjct: 381 LELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQ 440
Query: 440 AGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPD 496
A A V+ M +G+ P+++TY+ L+ + K K +++ ++ S PD
Sbjct: 441 ARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPD 497
Score = 122 bits (307), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 168/392 (42%), Gaps = 70/392 (17%)
Query: 88 CKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKL 147
C I +A+AL+ QM +G+ P ++++ +LI L + EA A+ MV G P L
Sbjct: 159 CHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDL 218
Query: 148 RFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINE 207
Y ++ G K+G L LL ME I N Y ++D DD + E
Sbjct: 219 VTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTE 278
Query: 208 MRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGE 267
M +KG + N Y +I + G W A ++ ++ E ++ + ++++ID F K G+
Sbjct: 279 MENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGK 338
Query: 268 LVEALEVFEKMQQESIRPDI-----------------------------------VTWNS 292
LV+A +++E+M + SI P+I VT+N+
Sbjct: 339 LVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNT 398
Query: 293 LIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRG 352
LI CKA V K +ELF +M ++G + + T+I F +D
Sbjct: 399 LINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLI-------------HGFFQARDCD 445
Query: 353 HGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTV 412
+ ++ ++ +V + G+ P+ + IL + + G + +
Sbjct: 446 NAQM--VFKQMVSV--------------------GVHPNILTYNILLDGLCKNGKLAKAM 483
Query: 413 KVLQLMEPEGIEPNLVMLNVLINAFGVAGKYK 444
V + ++ +EP++ N++I AGK+K
Sbjct: 484 VVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWK 515
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 122/259 (47%)
Query: 80 YNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMV 139
Y+ I CK D+A+ L +M+ G P+ I+Y+SLI L + GR +A + +M+
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 315
Query: 140 CFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLD 199
NP L ++ L+ F+KKG L +L M I N TY L++ RL
Sbjct: 316 ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLG 375
Query: 200 DTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSII 259
+ ++ M K N Y +I + K + + E+ + GL + Y ++I
Sbjct: 376 EAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLI 435
Query: 260 DTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFY 319
F + + A VF++M + P+I+T+N L+ CK G +AKA+ +F +Q
Sbjct: 436 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME 495
Query: 320 PDPKIFITIISCLGELGKW 338
PD + +I + + GKW
Sbjct: 496 PDIYTYNIMIEGMCKAGKW 514
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 114/223 (51%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+Y+ I C G +A LL+ M +P+ +++++LI+A G+ ++A+ +++EM
Sbjct: 290 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEM 349
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
+ +P + Y+ L+ GF LG ++L +M N TY L++ A R+
Sbjct: 350 IKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRV 409
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSI 258
D + EM +G N+ Y +I + A + +++ +G+ + YN +
Sbjct: 410 DKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNIL 469
Query: 259 IDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAG 301
+D K G+L +A+ VFE +Q+ ++ PDI T+N +I CKAG
Sbjct: 470 LDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 512
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 112/268 (41%), Gaps = 35/268 (13%)
Query: 241 EEIREMGLSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKA 300
E++ +G+S + YN +I+ F + L AL + KM + PDIVT NSL+ C
Sbjct: 102 EKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHG 161
Query: 301 GDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIY 360
++ A+ L QM E G+ PD F T+I L H K
Sbjct: 162 NRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFL------------------HNKASEAV 203
Query: 361 AILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEP 420
A L+D Q G QP + + N ++G + + +L ME
Sbjct: 204 A-LIDRMVQ----------------RGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEA 246
Query: 421 EGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHK 480
IE N+V+ + +I++ +AL+++ M++ G+ P+++TYS+L+ ++
Sbjct: 247 AKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSD 306
Query: 481 VPEIYKQMESSGCTPDRKARQILQSALV 508
+ M P+ L A V
Sbjct: 307 ASRLLSDMIERKINPNLVTFSALIDAFV 334
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 185/409 (45%), Gaps = 35/409 (8%)
Query: 88 CKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKL 147
C+ + A++ L +M LG PS +++ SL+ R +A +F +MV G+ P +
Sbjct: 127 CRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNV 186
Query: 148 RFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINE 207
YN ++ G +C++++ +D+ ++N
Sbjct: 187 VIYNTIIDG---------------------LCKSKQ--------------VDNALDLLNR 211
Query: 208 MRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGE 267
M G + Y +I +G W A +V + + + D +N++ID K G
Sbjct: 212 MEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGR 271
Query: 268 LVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFIT 327
+ EA E +E+M + S+ PDIVT++ LI C + +A E+F M +G +PD +
Sbjct: 272 VSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSI 331
Query: 328 IISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEG 387
+I+ + K + K F M RG + Y IL+ Y + G+ EE + G
Sbjct: 332 LINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCG 391
Query: 388 LQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEAL 447
+ P+ + +L + G E+ + +L M+ G++ ++V N++I AG+ +A
Sbjct: 392 VHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAW 451
Query: 448 SVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPD 496
+Y + G+ PD+ TY+T+M + + ++++M+ G P+
Sbjct: 452 DIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/421 (22%), Positives = 187/421 (44%)
Query: 76 SGNSYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIF 135
+G+ Y + ++ + +D+++ L M PS ++ L+ A++ + + ++
Sbjct: 45 NGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLW 104
Query: 136 QEMVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNA 195
++M G L NILL F + L L L M +G + T+ LL+
Sbjct: 105 EQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRG 164
Query: 196 GRLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIY 255
R+ D + ++M G++ N +Y +I + A+ ++ + + G+ D Y
Sbjct: 165 DRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTY 224
Query: 256 NSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQE 315
NS+I G +A + M + I PD+ T+N+LI K G V++A E + +M
Sbjct: 225 NSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIR 284
Query: 316 QGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRD 375
+ PD + +I L + D ++ F M +G Y+IL++ Y + +
Sbjct: 285 RSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEH 344
Query: 376 PEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLIN 435
+ + G+ + + IL Y + G ++ + M G+ PN++ NVL++
Sbjct: 345 GMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLH 404
Query: 436 AFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTP 495
GK ++AL + M+ G+ D+VTY+ +++ +A + +IY + G P
Sbjct: 405 GLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMP 464
Query: 496 D 496
D
Sbjct: 465 D 465
Score = 112 bits (281), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 119/243 (48%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
++N I C K G + EA +M P ++Y+ LI L R EA+ +F M
Sbjct: 258 TFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFM 317
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
V G P + Y+IL+ G+ K + G +L M G+ RN TY IL+ + AG+L
Sbjct: 318 VSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKL 377
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSI 258
+ I M G N Y ++ DNG +KA+ I+ ++++ G+ D YN I
Sbjct: 378 NVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNII 437
Query: 259 IDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGF 318
I K GE+ +A +++ + + + PDI T+ +++ K G +A LF +M+E G
Sbjct: 438 IRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGI 497
Query: 319 YPD 321
P+
Sbjct: 498 LPN 500
Score = 105 bits (262), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 126/274 (45%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+YN I C G +A +++ M +P ++ +LI+A GR EA+ ++EM
Sbjct: 223 TYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEM 282
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
+ +P + Y++L+ G L + M G + TY IL++ + + ++
Sbjct: 283 IRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKV 342
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSI 258
+ + EM +G N+ Y +I Y G A I + G+ + YN +
Sbjct: 343 EHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVL 402
Query: 259 IDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGF 318
+ G++ +AL + MQ+ + DIVT+N +IR CKAG+VA A +++ + QG
Sbjct: 403 LHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGL 462
Query: 319 YPDPKIFITIISCLGELGKWDVIKKNFENMKDRG 352
PD + T++ L + G F MK+ G
Sbjct: 463 MPDIWTYTTMMLGLYKKGLRREADALFRKMKEDG 496
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 104/263 (39%), Gaps = 35/263 (13%)
Query: 241 EEIREMGLSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKA 300
E+++ +G+ + N +++ F + +L AL KM + P IVT+ SL+ C+
Sbjct: 105 EQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRG 164
Query: 301 GDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIY 360
V AL +F QM G+ P+ I+ TII L + + D M+ G G Y
Sbjct: 165 DRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTY 224
Query: 361 AILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEP 420
L+ GR+ D +++ M
Sbjct: 225 NSLISGLCSSGRWSD-----------------------------------ATRMVSCMTK 249
Query: 421 EGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHK 480
I P++ N LI+A G+ EA Y M + PD+VTYS L+ + +
Sbjct: 250 REIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDE 309
Query: 481 VPEIYKQMESSGCTPDRKARQIL 503
E++ M S GC PD IL
Sbjct: 310 AEEMFGFMVSKGCFPDVVTYSIL 332
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 49/104 (47%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+YN + C G I++A+ +LA MQ G ++Y +I + G +A I+ +
Sbjct: 398 TYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSL 457
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQ 182
C G P + Y ++ G KKGL L M++ GI N+
Sbjct: 458 NCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNE 501
Score = 38.1 bits (87), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 36/72 (50%)
Query: 67 DGSNSGEEFSGNSYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVG 126
D +G + +YN I+ CK G++ +A + + G P +Y +++ L G
Sbjct: 421 DMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKG 480
Query: 127 RTLEADAIFQEM 138
EADA+F++M
Sbjct: 481 LRREADALFRKM 492
>sp|Q9ZQF1|PP152_ARATH Pentatricopeptide repeat-containing protein At2g15630,
mitochondrial OS=Arabidopsis thaliana GN=At2g15630 PE=3
SV=1
Length = 627
Score = 146 bits (369), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/419 (24%), Positives = 193/419 (46%), Gaps = 40/419 (9%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
++N I CK G + +A L M+ G P+ ++Y +L++ + GR A I EM
Sbjct: 227 TFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEM 286
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
GF P ++ YN +L +G S +L M+++G+ + +Y IL+ N G L
Sbjct: 287 KSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDL 343
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVI-GLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNS 257
+ + +EM +G + Y +I GL+ +N + + ++ EIRE G+ LD YN
Sbjct: 344 EMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEI-LIREIREKGIVLDSVTYNI 402
Query: 258 IIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQG 317
+I+ + ++G+ +A + ++M + I+P T+ SLI C+ +A ELF ++ +G
Sbjct: 403 LINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKG 462
Query: 318 FYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPE 377
PD + T++ +G D + F +K+
Sbjct: 463 MKPDLVMMNTLMDGHCAIGNMD---RAFSLLKE--------------------------- 492
Query: 378 ECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAF 437
+ + + P + L +G E+ +++ M+ GI+P+ + N LI+ +
Sbjct: 493 -----MDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGY 547
Query: 438 GVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPD 496
G K A V M +G +P L+TY+ L+K + ++ E+ ++M+S G P+
Sbjct: 548 SKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPN 606
Score = 115 bits (289), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 144/326 (44%), Gaps = 3/326 (0%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+YN + + C G E +L +M+ +G P S+SY LI ++ G A A EM
Sbjct: 297 TYNPILSWMCNEGRASE---VLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEM 353
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
V G P YN L+ G + + L+ + + GI + TY IL++ + G
Sbjct: 354 VKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDA 413
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSI 258
+ + +EM + G Q F Y +I + ++A + E++ G+ D + N++
Sbjct: 414 KKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTL 473
Query: 259 IDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGF 318
+D G + A + ++M SI PD VT+N L+R C G +A EL +M+ +G
Sbjct: 474 MDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGI 533
Query: 319 YPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEE 378
PD + T+IS + G + M G Y L+ + EE
Sbjct: 534 KPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEE 593
Query: 379 CIAALKLEGLQPSGSMFCILANAYAQ 404
+ +K EG+ P+ S FC + A +
Sbjct: 594 LLREMKSEGIVPNDSSFCSVIEAMSN 619
Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/392 (21%), Positives = 165/392 (42%), Gaps = 38/392 (9%)
Query: 149 FYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINEM 208
+++L+R + ++ +M++ G ET +L R+++ W+ +M
Sbjct: 157 LFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADM 216
Query: 209 RSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGEL 268
+ N + + +I + G KKA G + + G+ YN+++ F G +
Sbjct: 217 YRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRI 276
Query: 269 VEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITI 328
A + +M+ + +PD+ T+N ++ W C G +A E+ +M+E G PD + +
Sbjct: 277 EGARLIISEMKSKGFQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLVPDSVSYNIL 333
Query: 329 ISCLGELGKWDVIKKNFENMKDRG------------HG-----KIGA------------- 358
I G ++ + M +G HG KI A
Sbjct: 334 IRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGI 393
Query: 359 -----IYAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVK 413
Y IL++ Y Q+G + + +G+QP+ + L ++ + +
Sbjct: 394 VLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADE 453
Query: 414 VLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFI 473
+ + + +G++P+LVM+N L++ G A S+ M + I+PD VTY+ LM+
Sbjct: 454 LFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLC 513
Query: 474 RAKKFHKVPEIYKQMESSGCTPDRKARQILQS 505
KF + E+ +M+ G PD + L S
Sbjct: 514 GEGKFEEARELMGEMKRRGIKPDHISYNTLIS 545
Score = 89.7 bits (221), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 109/257 (42%), Gaps = 35/257 (13%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+YN I C+ GD +A AL +M G P+ +Y SLI L +T EAD +F+++
Sbjct: 399 TYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKV 458
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
V G P L N L+ G H G +
Sbjct: 459 VGKGMKPDLVMMNTLMDG-----------------------------------HCAIGNM 483
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSI 258
D + ++ EM + Y ++ G +++A ++ E++ G+ D YN++
Sbjct: 484 DRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTL 543
Query: 259 IDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGF 318
I + K G+ A V ++M P ++T+N+L++ K + A EL +M+ +G
Sbjct: 544 ISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGI 603
Query: 319 YPDPKIFITIISCLGEL 335
P+ F ++I + L
Sbjct: 604 VPNDSSFCSVIEAMSNL 620
Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 93/183 (50%), Gaps = 3/183 (1%)
Query: 288 VTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNFEN 347
+ ++ L+R C+ V +A+E F M+E+GFYP + I++ L L + + + +
Sbjct: 156 ILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYAD 215
Query: 348 MKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFCILANAYAQQGL 407
M + I++++ + G+ + + + +++ G++P+ + L ++ +G
Sbjct: 216 MYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGR 275
Query: 408 CEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYST 467
E ++ M+ +G +P++ N +++ G+ E L MK+IG+ PD V+Y+
Sbjct: 276 IEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVL---REMKEIGLVPDSVSYNI 332
Query: 468 LMK 470
L++
Sbjct: 333 LIR 335
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 146 bits (368), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 96/408 (23%), Positives = 182/408 (44%)
Query: 89 KLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKLR 148
K+ D ++L QMQ LG P + ++ + + A +M+ GF P L
Sbjct: 95 KMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLV 154
Query: 149 FYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINEM 208
+ LL G+ + L + MG N TY L+ L+ + N+M
Sbjct: 155 TFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQM 214
Query: 209 RSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGEL 268
+ G + N Y ++ + G W A ++ ++ + + + + ++ID F K G+L
Sbjct: 215 GTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKL 274
Query: 269 VEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITI 328
+EA E++ M Q S+ PD+ T+ SLI C G + +A ++F M+ G YP+ I+ T+
Sbjct: 275 MEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTL 334
Query: 329 ISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGL 388
I + + + K F M +G Y +L+ Y GR +E +
Sbjct: 335 IHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRA 394
Query: 389 QPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALS 448
P + +L + G E+ + + + M ++ N+V ++I GK ++A
Sbjct: 395 PPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFD 454
Query: 449 VYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPD 496
++ + G+ P+++TY+T++ F R H+ ++K+M+ G P+
Sbjct: 455 LFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPN 502
Score = 123 bits (308), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 161/346 (46%), Gaps = 14/346 (4%)
Query: 88 CKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKL 147
C I++A+AL Q+ +GF P+ ++Y +LI L A +F +M G P +
Sbjct: 164 CHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNV 223
Query: 148 RFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINE 207
YN L+ G + G G + LL M I N T+ L+D V G+L + + N
Sbjct: 224 VTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNV 283
Query: 208 MRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQ-------IYNSIID 260
M + F YG +I NG+ G+++E R+M ++R IY ++I
Sbjct: 284 MIQMSVYPDVFTYGSLI-----NGLC--MYGLLDEARQMFYLMERNGCYPNEVIYTTLIH 336
Query: 261 TFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYP 320
F K + + +++F +M Q+ + + +T+ LI+ +C G A E+F QM + P
Sbjct: 337 GFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPP 396
Query: 321 DPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECI 380
D + + ++ L GK + FE M+ R Y I++ + G+ D +
Sbjct: 397 DIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLF 456
Query: 381 AALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPN 426
+L +G++P+ + + + + ++GL + + + M+ +G PN
Sbjct: 457 CSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPN 502
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 158/371 (42%)
Query: 95 EAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKLRFYNILL 154
A L +M LGF P +++ SL+ R +A A+F +++ GF P + Y L+
Sbjct: 136 RASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLI 195
Query: 155 RGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINEMRSKGFQ 214
R K L L M G N TY L+ GR D ++ +M + +
Sbjct: 196 RCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIE 255
Query: 215 LNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGELVEALEV 274
N + +I + G +A + + +M + D Y S+I+ YG L EA ++
Sbjct: 256 PNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQM 315
Query: 275 FEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGE 334
F M++ P+ V + +LI CK+ V +++F +M ++G + + +I
Sbjct: 316 FYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCL 375
Query: 335 LGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSM 394
+G+ DV ++ F M R Y +L+D G+ ++ + +
Sbjct: 376 VGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVT 435
Query: 395 FCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMK 454
+ I+ + G E + + +G++PN++ +I+ F G EA S++ MK
Sbjct: 436 YTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMK 495
Query: 455 DIGISPDLVTY 465
+ G P+ Y
Sbjct: 496 EDGFLPNESVY 506
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 130/273 (47%)
Query: 235 KAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLI 294
+A + ++ ++G D + S+++ + + + +A+ +F+++ +P++VT+ +LI
Sbjct: 136 RASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLI 195
Query: 295 RWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHG 354
R CK + A+ELF QM G P+ + +++ L E+G+W +M R
Sbjct: 196 RCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIE 255
Query: 355 KIGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKV 414
+ L+D + + G+ + +E + + P + L N GL ++ ++
Sbjct: 256 PNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQM 315
Query: 415 LQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIR 474
LME G PN V+ LI+ F + + ++ + +++ M G+ + +TY+ L++ +
Sbjct: 316 FYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCL 375
Query: 475 AKKFHKVPEIYKQMESSGCTPDRKARQILQSAL 507
+ E++ QM S PD + +L L
Sbjct: 376 VGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGL 408
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 140/317 (44%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+Y I+ CK ++ A+ L QM G P+ ++Y +L+ L +GR +A + ++M
Sbjct: 190 TYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDM 249
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
+ P + + L+ F+K G L L VM M + + TY L++ G L
Sbjct: 250 MKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLL 309
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSI 258
D+ + M G N +Y +I + + + + I E+ + G+ + Y +
Sbjct: 310 DEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVL 369
Query: 259 IDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGF 318
I + G A EVF +M PDI T+N L+ C G V KAL +F M+++
Sbjct: 370 IQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREM 429
Query: 319 YPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEE 378
+ + II + +LGK + F ++ +G Y ++ + + G + +
Sbjct: 430 DINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADS 489
Query: 379 CIAALKLEGLQPSGSMF 395
+K +G P+ S++
Sbjct: 490 LFKKMKEDGFLPNESVY 506
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/108 (21%), Positives = 52/108 (48%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+YN + C G +++A+ + M+ + ++Y +I+ + +G+ +A +F +
Sbjct: 400 TYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSL 459
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYE 186
G P + Y ++ GF ++GL+ L M++ G N+ Y+
Sbjct: 460 FSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVYK 507
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 191/413 (46%)
Query: 80 YNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMV 139
+N+ + KL D ++L +M+ LG ++ +I + A +I +M+
Sbjct: 88 FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKML 147
Query: 140 CFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLD 199
G+ P L+ GF ++ + L+ M ++G + Y ++D R++
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVN 207
Query: 200 DTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSII 259
D + E+ KG + N Y ++ ++ W A ++ ++ + ++ + Y++++
Sbjct: 208 DAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALL 267
Query: 260 DTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFY 319
D F K G+++EA E+FE+M + SI PDIVT++SLI C + +A ++F M +G
Sbjct: 268 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCL 327
Query: 320 PDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEEC 379
D + T+I+ + + + K F M RG Y L+ + Q G +E
Sbjct: 328 ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF 387
Query: 380 IAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGV 439
+ + G+ P + IL G E+ + + + M+ ++ ++V +I
Sbjct: 388 FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCK 447
Query: 440 AGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSG 492
GK +EA S++ + G+ PD+VTY+T+M H+V +Y +M+ G
Sbjct: 448 TGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 500
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 130/274 (47%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+Y + C +A LL+ M P+ I+Y++L++A G+ LEA +F+EM
Sbjct: 227 TYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEM 286
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
V +P + Y+ L+ G + +++ +M G + +Y L++ A R+
Sbjct: 287 VRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRV 346
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSI 258
+D + EM +G N+ Y +I + G KA ++ G+S D YN +
Sbjct: 347 EDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNIL 406
Query: 259 IDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGF 318
+ GEL +AL +FE MQ+ + DIVT+ ++IR CK G V +A LF + +G
Sbjct: 407 LGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGL 466
Query: 319 YPDPKIFITIISCLGELGKWDVIKKNFENMKDRG 352
PD + T++S L G ++ + MK G
Sbjct: 467 KPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 500
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/203 (19%), Positives = 86/203 (42%)
Query: 306 ALELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVD 365
A++LF+ M + +P F ++S + +L K+DV+ + M+ G + I+++
Sbjct: 69 AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128
Query: 366 IYGQYGRFRDPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEP 425
+ + + + G +P L N + ++ V ++ M G +P
Sbjct: 129 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP 188
Query: 426 NLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIY 485
++V N +I++ + +A + ++ GI P++VTY+ L+ + ++ +
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 248
Query: 486 KQMESSGCTPDRKARQILQSALV 508
M TP+ L A V
Sbjct: 249 SDMIKKKITPNVITYSALLDAFV 271
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/473 (23%), Positives = 203/473 (42%), Gaps = 39/473 (8%)
Query: 70 NSGEEFSGNSYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTL 129
++G + S YN I CK GDI A +A+M P+ ++Y SL+ S G+
Sbjct: 430 DTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKIN 489
Query: 130 EADAIFQEMVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILL 189
+A ++ EM G P + + LL G + GL+ +L M + + N+ TY +++
Sbjct: 490 KALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMI 549
Query: 190 DYHVNAGRLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLS 249
+ + G + + + EM KG +++ Y +I G +A V+ + +
Sbjct: 550 EGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCE 609
Query: 250 LDRQIYNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALEL 309
L+ Y ++ F + G+L EAL V ++M Q + D+V + LI K D L
Sbjct: 610 LNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGL 669
Query: 310 FTQMQEQGFYPDPKIFITIISCLGELGK-------WDVI--------------------K 342
+M ++G PD I+ ++I + G WD++ K
Sbjct: 670 LKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCK 729
Query: 343 KNFENMKDRGHGKIGAI--------YAILVDIY--GQYGRFRDPEECIAALKLEGLQPSG 392
F N + K+ + Y +DI G+ + E A LK GL +
Sbjct: 730 AGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILK--GLLANT 787
Query: 393 SMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHL 452
+ + +L + +QG E+ +++ M +G+ P+ + +IN K+A+ +++
Sbjct: 788 ATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNS 847
Query: 453 MKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQILQS 505
M + GI PD V Y+TL+ A + K E+ +M G P+ K + S
Sbjct: 848 MTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRTTTS 900
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/417 (24%), Positives = 176/417 (42%)
Query: 80 YNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMV 139
YN I CK + EA+ + + P ++Y +L+ L V + EM+
Sbjct: 265 YNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEML 324
Query: 140 CFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLD 199
C F+P + L+ G K+G + L+ + D G+ N Y L+D +
Sbjct: 325 CLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFH 384
Query: 200 DTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSII 259
+ L+ + M G + N Y +I ++ G A+ + E+ + GL L YNS+I
Sbjct: 385 EAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLI 444
Query: 260 DTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFY 319
+ K+G++ A +M + + P +VT+ SL+ +C G + KAL L+ +M +G
Sbjct: 445 NGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIA 504
Query: 320 PDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEEC 379
P F T++S L G K F M + Y ++++ Y + G E
Sbjct: 505 PSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEF 564
Query: 380 IAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGV 439
+ + +G+ P + L + G + + + E N + L++ F
Sbjct: 565 LKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCR 624
Query: 440 AGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPD 496
GK +EALSV M G+ DLV Y L+ ++ K + K+M G PD
Sbjct: 625 EGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPD 681
Score = 129 bits (323), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 111/464 (23%), Positives = 182/464 (39%), Gaps = 43/464 (9%)
Query: 79 SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138
+Y+ I C+ G +D A++ L +M G S Y SLI G A+ EM
Sbjct: 404 TYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEM 463
Query: 139 VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198
+ P + Y L+ G+ KG + RL M GI + T+ LL AG +
Sbjct: 464 INKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLI 523
Query: 199 DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSI 258
D + NEM + N Y +I Y + G KA ++E+ E G+ D Y +
Sbjct: 524 RDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPL 583
Query: 259 IDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGF 318
I G+ EA + + + + + + + L+ C+ G + +AL + +M ++G
Sbjct: 584 IHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGV 643
Query: 319 YPDPKIFITIISCLGELGKWDVIKKNF----ENMKDRGHGKIGAIYAILVDIYGQYGRFR 374
D + +I G L D +K F + M DRG IY ++D + G F+
Sbjct: 644 DLDLVCYGVLID--GSLKHKD--RKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFK 699
Query: 375 DPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEP-------------- 420
+ + EG P+ + + N + G + + M+P
Sbjct: 700 EAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFL 759
Query: 421 ---------------------EGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGIS 459
+G+ N N+LI F G+ +EA + M G+S
Sbjct: 760 DILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVS 819
Query: 460 PDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQIL 503
PD +TY+T++ R K E++ M G PDR A L
Sbjct: 820 PDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTL 863
Score = 102 bits (254), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 167/388 (43%), Gaps = 3/388 (0%)
Query: 118 LIEALASVGRTLEADAIFQEMVC-FGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDM 176
LI+ R L+ +F+ M+ P++R + LL G +K GL L M +
Sbjct: 162 LIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSV 221
Query: 177 GICRNQETYEILLDYHVNAGRLDDTWLIINEMRSKGFQLNSFVYGKVI-GLYRDNGMWKK 235
GI + Y ++ L +I M + G +N Y +I GL + +W+
Sbjct: 222 GIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWE- 280
Query: 236 AVGIVEEIREMGLSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIR 295
AVGI +++ L D Y +++ K E LE+ ++M P +SL+
Sbjct: 281 AVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVE 340
Query: 296 WHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGK 355
K G + +AL L ++ + G P+ ++ +I L + K+ + F+ M G
Sbjct: 341 GLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRP 400
Query: 356 IGAIYAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVL 415
Y+IL+D++ + G+ + + GL+ S + L N + + G +
Sbjct: 401 NDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFM 460
Query: 416 QLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRA 475
M + +EP +V L+ + GK +AL +YH M GI+P + T++TL+ RA
Sbjct: 461 AEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRA 520
Query: 476 KKFHKVPEIYKQMESSGCTPDRKARQIL 503
+++ +M P+R ++
Sbjct: 521 GLIRDAVKLFNEMAEWNVKPNRVTYNVM 548
Score = 40.4 bits (93), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 54/121 (44%)
Query: 387 GLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEA 446
G++P ++ + + + + +++ ME G + N+V NVLI+ K EA
Sbjct: 222 GIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEA 281
Query: 447 LSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQILQSA 506
+ + + + PD+VTY TL+ + ++F E+ +M +P A L
Sbjct: 282 VGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEG 341
Query: 507 L 507
L
Sbjct: 342 L 342
>sp|Q9LSQ2|PP239_ARATH Putative pentatricopeptide repeat-containing protein At3g16890,
mitochondrial OS=Arabidopsis thaliana GN=PPR40 PE=3 SV=1
Length = 659
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 116/486 (23%), Positives = 200/486 (41%), Gaps = 70/486 (14%)
Query: 89 KLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKLR 148
+LG + AQ+ LG PS+ Y ++I+AL A FQ+M G P
Sbjct: 157 RLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRF 216
Query: 149 FYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINEM 208
YNIL+ G KKG++ RL+ ME G N TY IL+D + AGR+D+ + M
Sbjct: 217 TYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMM 276
Query: 209 RSKGFQLN-----SFVYG------------------------------KVIGLYRDNGMW 233
R + N +FV+G V+ +N M
Sbjct: 277 RVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMA 336
Query: 234 KKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQESIRP-------- 285
K+ + +I E G D +N+ + K +LVE +F+ ++P
Sbjct: 337 KETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVL 396
Query: 286 ---------------------------DIVTWNSLIRWHCKAGDVAKALELFTQMQEQGF 318
+ ++N++I CKA + A T+MQ++G
Sbjct: 397 VQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGI 456
Query: 319 YPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEE 378
P+ F T +S G + E + G ++++++ + +D +
Sbjct: 457 SPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFD 516
Query: 379 CIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFG 438
C + G++P+ + IL + G +++VK+ M+ G+ P+L N I +F
Sbjct: 517 CFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFC 576
Query: 439 VAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRK 498
K K+A + M IG+ PD TYSTL+KA + + + E++ +E GC PD
Sbjct: 577 KMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSY 636
Query: 499 ARQILQ 504
+++++
Sbjct: 637 TKRLVE 642
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/445 (21%), Positives = 170/445 (38%), Gaps = 74/445 (16%)
Query: 96 AMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMVCFGFNPKLRFYNILLR 155
+M LL +++ G+ S LI + +G + +F ++ G P R YN ++
Sbjct: 129 SMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVI- 187
Query: 156 GFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLDDTWLIINEMRSKGFQL 215
D V + LD +L +MRS G +
Sbjct: 188 ----------------------------------DALVKSNSLDLAYLKFQQMRSDGCKP 213
Query: 216 NSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSIIDTFGKYGELVEALEVF 275
+ F Y +I G+ +A+ +V+++ + G + Y +ID F G + EAL+
Sbjct: 214 DRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQL 273
Query: 276 EKMQQESIRPDIVTWNSLIRW------HCKAGDVAKAL---------------------- 307
E M+ + P+ T + + CKA +V
Sbjct: 274 EMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNN 333
Query: 308 -------ELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIK--KNFENMKDRGHGKIGA 358
+ ++ E+G+ PD F +SCL L D+++ + F+ RG
Sbjct: 334 SMAKETGQFLRKIGERGYIPDSSTFNAAMSCL--LKGHDLVETCRIFDGFVSRGVKPGFN 391
Query: 359 IYAILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLM 418
Y +LV RF + + + + ++GL S + + + + E L M
Sbjct: 392 GYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEM 451
Query: 419 EPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKF 478
+ GI PNLV N ++ + V G K+ V + G PD++T+S ++ RAK+
Sbjct: 452 QDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEI 511
Query: 479 HKVPEIYKQMESSGCTPDRKARQIL 503
+ +K+M G P+ IL
Sbjct: 512 KDAFDCFKEMLEWGIEPNEITYNIL 536
Score = 85.5 bits (210), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 137/323 (42%), Gaps = 20/323 (6%)
Query: 180 RNQETYEILLDYHVNAGRLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGI 239
++Q +L + G L + ++ E+R G++++ + +IG + G+ K +
Sbjct: 108 KDQSLKSVLGNALFRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDV 167
Query: 240 VEEIREMGLSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCK 299
+I +G+ ++YN++ID K L A F++M+ + +PD T+N LI CK
Sbjct: 168 FAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCK 227
Query: 300 AGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAI 359
G V +A+ L QM+++G P+ + +I G+ D K E M+ R A
Sbjct: 228 KGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEAT 287
Query: 360 YAILVDIYGQYGRFRDPEECIAALKLEGLQPSGS----------MFCILANAYAQQGLCE 409
V +G FR C A L G S ++C+ N+ A+
Sbjct: 288 IRTFV-----HGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAK----- 337
Query: 410 QTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLM 469
+T + L+ + G P+ N ++ E ++ G+ P Y L+
Sbjct: 338 ETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLV 397
Query: 470 KAFIRAKKFHKVPEIYKQMESSG 492
+A + A++F + KQM G
Sbjct: 398 QALLNAQRFSEGDRYLKQMGVDG 420
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 55/111 (49%)
Query: 393 SMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGVAGKYKEALSVYHL 452
S+ +L NA ++G ++++L+ + G + ++ VLI ++G G K V+
Sbjct: 111 SLKSVLGNALFRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQ 170
Query: 453 MKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQIL 503
+ +G+ P Y+ ++ A +++ ++QM S GC PDR IL
Sbjct: 171 ISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNIL 221
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 189,067,625
Number of Sequences: 539616
Number of extensions: 8129332
Number of successful extensions: 29496
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 439
Number of HSP's successfully gapped in prelim test: 69
Number of HSP's that attempted gapping in prelim test: 19177
Number of HSP's gapped (non-prelim): 3539
length of query: 514
length of database: 191,569,459
effective HSP length: 122
effective length of query: 392
effective length of database: 125,736,307
effective search space: 49288632344
effective search space used: 49288632344
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)